LA08_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain LA08_00010 PF02767 DNA polymerase III beta subunit, central domain LA08_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain LA08_00020 PF02463 RecF/RecN/SMC N terminal domain LA08_00025 PF00204 DNA gyrase B LA08_00025 PF00986 DNA gyrase B subunit, carboxyl terminus LA08_00025 PF01751 Toprim domain LA08_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA08_00030 PF02517 CAAX protease self-immunity LA08_00035 PF01435 Peptidase family M48 LA08_00040 PF09295 ChAPs (Chs5p-Arf1p-binding proteins) LA08_00040 PF13181 Tetratricopeptide repeat LA08_00045 PF03544 Gram-negative bacterial TonB protein C-terminal LA08_00050 PF01618 LA08_00050 LA08_00055 PF02472 Biopolymer transport protein ExbD/TolR LA08_00060 PF02472 Biopolymer transport protein ExbD/TolR LA08_00065 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LA08_00075 PF13091 PLD-like domain LA08_00085 PF00316 Fructose-1-6-bisphosphatase LA08_00090 PF00155 Aminotransferase class I and II LA08_00095 PF00593 TonB dependent receptor LA08_00095 PF07715 TonB-dependent Receptor Plug Domain LA08_00110 PF01609 Transposase DDE domain LA08_00110 PF05598 LA08_00110 LA08_00115 PF01070 FMN-dependent dehydrogenase LA08_00120 PF04191 Phospholipid methyltransferase LA08_00135 PF07055 Enoyl reductase FAD binding domain LA08_00135 PF12241 Trans-2-enoyl-CoA reductase catalytic region LA08_00135 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase LA08_00145 PF00294 pfkB family carbohydrate kinase LA08_00155 PF01609 Transposase DDE domain LA08_00155 PF05598 LA08_00155 LA08_00160 PF00005 ABC transporter LA08_00170 PF01609 Transposase DDE domain LA08_00170 PF05598 LA08_00170 LA08_00210 PF01609 Transposase DDE domain LA08_00210 PF05598 LA08_00210 LA08_00220 PF00270 DEAD/DEAH box helicase LA08_00220 PF00271 Helicase conserved C-terminal domain LA08_00235 PF06903 LA08_00235 LA08_00240 PF00890 FAD binding domain LA08_00240 PF13454 FAD-NAD(P)-binding LA08_00260 PF15535 LA08_00260 LA08_00275 PF01609 Transposase DDE domain LA08_00305 PF12760 Transposase zinc-ribbon domain LA08_00305 PF12762 LA08_00305 LA08_00315 PF13546 LA08_00315 LA08_00325 PF03150 Di-haem cytochrome c peroxidase LA08_00335 PF13460 NADH(P)-binding LA08_00340 PF00128 Alpha amylase, catalytic domain LA08_00340 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LA08_00345 PF11154 LA08_00345 LA08_00350 PF00128 Alpha amylase, catalytic domain LA08_00355 PF02446 4-alpha-glucanotransferase LA08_00360 PF00128 Alpha amylase, catalytic domain LA08_00360 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LA08_00360 PF11941 Domain of unknown function (DUF3459) LA08_00365 PF00128 Alpha amylase, catalytic domain LA08_00365 PF02806 Alpha amylase, C-terminal all-beta domain LA08_00365 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LA08_00375 PF00990 GGDEF domain LA08_00380 PF02638 LA08_00380 LA08_00385 PF05661 LA08_00385 LA08_00395 PF03109 LA08_00395 LA08_00410 PF00924 Mechanosensitive ion channel LA08_00410 PF12607 LA08_00410 LA08_00415 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LA08_00435 PF01464 Transglycosylase SLT domain LA08_00445 PF00263 LA08_00445 LA08_00445 PF03958 Bacterial type II/III secretion system short domain LA08_00450 PF01311 LA08_00450 LA08_00455 PF09486 LA08_00455 LA08_00460 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LA08_00460 PF02874 ATP synthase alpha/beta family, beta-barrel domain LA08_00465 PF02108 LA08_00465 LA08_00470 PF09502 LA08_00470 LA08_00475 PF01514 Secretory protein of YscJ/FliF family LA08_00480 PF09487 LA08_00480 LA08_00485 PF09613 LA08_00485 LA08_00490 PF01312 FlhB HrpN YscU SpaS Family LA08_00495 PF00771 FHIPEP family LA08_00500 PF09483 LA08_00500 LA08_00505 PF01052 Surface presentation of antigens (SPOA) LA08_00510 PF00813 LA08_00510 LA08_00515 PF01313 LA08_00515 LA08_00540 PF05932 Tir chaperone protein (CesT) family LA08_00570 PF01609 Transposase DDE domain LA08_00570 PF05598 LA08_00570 LA08_00575 PF13546 LA08_00575 LA08_00580 PF01609 Transposase DDE domain LA08_00580 PF05598 LA08_00580 LA08_00585 PF05819 LA08_00585 LA08_00590 PF13855 Leucine rich repeat LA08_00615 PF13180 PDZ domain LA08_00615 PF13365 Trypsin-like peptidase domain LA08_00635 PF01370 NAD dependent epimerase/dehydratase family LA08_00635 PF08338 Domain of unknown function (DUF1731) LA08_00645 PF01609 Transposase DDE domain LA08_00645 PF05598 LA08_00645 LA08_00665 PF13358 DDE superfamily endonuclease LA08_00665 PF13551 Winged helix-turn helix LA08_00665 PF13592 LA08_00665 LA08_00670 PF00665 Integrase core domain LA08_00690 PF00293 NUDIX domain LA08_00700 PF10116 LA08_00700 LA08_00715 PF13936 Helix-turn-helix domain LA08_00720 PF16576 LA08_00720 LA08_00730 PF00005 ABC transporter LA08_00735 PF02687 LA08_00735 LA08_00735 PF12704 MacB-like periplasmic core domain LA08_00740 PF02687 LA08_00740 LA08_00740 PF12704 MacB-like periplasmic core domain LA08_00755 PF08845 LA08_00755 LA08_00765 PF05016 Plasmid stabilisation system protein LA08_00770 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system LA08_00775 PF03006 LA08_00775 LA08_00780 PF00270 DEAD/DEAH box helicase LA08_00780 PF00271 Helicase conserved C-terminal domain LA08_00780 PF09369 LA08_00780 LA08_00785 PF13482 RNase_H superfamily LA08_00790 PF03009 Glycerophosphoryl diester phosphodiesterase family LA08_00795 PF00480 ROK family LA08_00800 PF00593 TonB dependent receptor LA08_00800 PF07715 TonB-dependent Receptor Plug Domain LA08_00805 PF08975 Domain of unknown function (DUF1868) LA08_00810 PF03435 Saccharopine dehydrogenase LA08_00835 PF01028 Eukaryotic DNA topoisomerase I, catalytic core LA08_00840 PF11720 Peptidase inhibitor I78 family LA08_00845 PF00310 Glutamine amidotransferases class-II LA08_00845 PF01493 GXGXG motif LA08_00845 PF01645 Conserved region in glutamate synthase LA08_00845 PF04898 Glutamate synthase central domain LA08_00850 PF07992 Pyridine nucleotide-disulphide oxidoreductase LA08_00850 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LA08_00865 PF12760 Transposase zinc-ribbon domain LA08_00865 PF12762 LA08_00865 LA08_00890 PF01609 Transposase DDE domain LA08_00890 PF05598 LA08_00890 LA08_00900 PF00356 Bacterial regulatory proteins, lacI family LA08_00900 PF13377 Periplasmic binding protein-like domain LA08_00930 PF00128 Alpha amylase, catalytic domain LA08_00930 PF02806 Alpha amylase, C-terminal all-beta domain LA08_00930 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LA08_00935 PF00128 Alpha amylase, catalytic domain LA08_00935 PF16657 LA08_00935 LA08_00940 PF00128 Alpha amylase, catalytic domain LA08_00940 PF11896 Domain of unknown function (DUF3416) LA08_00990 PF13546 LA08_00990 LA08_00995 PF01078 Magnesium chelatase, subunit ChlI LA08_00995 PF13335 LA08_00995 LA08_00995 PF13541 Subunit ChlI of Mg-chelatase LA08_01000 PF04380 LA08_01000 LA08_01005 PF00543 Nitrogen regulatory protein P-II LA08_01015 PF02838 Glycosyl hydrolase family 20, domain 2 LA08_01015 PF07555 beta-N-acetylglucosaminidase LA08_01030 PF13505 Outer membrane protein beta-barrel domain LA08_01035 PF09851 LA08_01035 LA08_01035 PF14470 Bacterial PH domain LA08_01040 PF01564 Spermine/spermidine synthase LA08_01040 PF17284 LA08_01040 LA08_01045 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LA08_01050 PF01609 Transposase DDE domain LA08_01050 PF05598 LA08_01050 LA08_01055 PF05954 Phage late control gene D protein (GPD) LA08_01055 PF10106 LA08_01055 LA08_01055 PF13296 LA08_01055 LA08_01060 PF11678 LA08_01060 LA08_01065 PF11394 LA08_01065 LA08_01070 PF05488 PAAR motif LA08_01075 PF11678 LA08_01075 LA08_01080 PF11394 LA08_01080 LA08_01095 PF01134 Glucose inhibited division protein A LA08_01095 PF13932 GidA associated domain 3 LA08_01110 PF00291 Pyridoxal-phosphate dependent enzyme LA08_01115 PF02698 DUF218 domain LA08_01120 PF12680 SnoaL-like domain LA08_01125 PF05118 Aspartyl/Asparaginyl beta-hydroxylase LA08_01130 PF08241 Methyltransferase domain LA08_01135 PF13561 Enoyl-(Acyl carrier protein) reductase LA08_01140 PF12697 Alpha/beta hydrolase family LA08_01155 PF14315 LA08_01155 LA08_01160 PF04349 Periplasmic glucan biosynthesis protein, MdoG LA08_01165 PF00512 His Kinase A (phospho-acceptor) domain LA08_01165 PF01590 GAF domain LA08_01170 PF00265 Thymidine kinase LA08_01175 PF00580 UvrD/REP helicase N-terminal domain LA08_01175 PF13361 UvrD-like helicase C-terminal domain LA08_01190 PF04337 Protein of unknown function, DUF480 LA08_01195 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) LA08_01200 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LA08_01205 PF04820 Tryptophan halogenase LA08_01210 PF00593 TonB dependent receptor LA08_01215 PF00593 TonB dependent receptor LA08_01215 PF13620 Carboxypeptidase regulatory-like domain LA08_01220 PF00356 Bacterial regulatory proteins, lacI family LA08_01220 PF13377 Periplasmic binding protein-like domain LA08_01235 PF01553 Acyltransferase LA08_01245 PF04325 Protein of unknown function (DUF465) LA08_01265 PF13472 GDSL-like Lipase/Acylhydrolase family LA08_01270 PF07883 Cupin domain LA08_01275 PF14300 Domain of unknown function (DUF4375) LA08_01280 PF00351 Biopterin-dependent aromatic amino acid hydroxylase LA08_01285 PF01037 AsnC family LA08_01285 PF13412 Winged helix-turn-helix DNA-binding LA08_01310 PF08212 Lipocalin-like domain LA08_01335 PF00107 Zinc-binding dehydrogenase LA08_01335 PF08240 Alcohol dehydrogenase GroES-like domain LA08_01345 PF00150 Cellulase (glycosyl hydrolase family 5) LA08_01355 PF00150 Cellulase (glycosyl hydrolase family 5) LA08_01365 PF00150 Cellulase (glycosyl hydrolase family 5) LA08_01375 PF02810 SEC-C motif LA08_01390 PF01609 Transposase DDE domain LA08_01390 PF05598 LA08_01390 LA08_01395 PF01263 Aldose 1-epimerase LA08_01395 PF01471 Putative peptidoglycan binding domain LA08_01395 PF13406 Transglycosylase SLT domain LA08_01400 PF07690 Major Facilitator Superfamily LA08_01405 PF01126 Heme oxygenase LA08_01410 PF00360 Phytochrome region LA08_01410 PF01590 GAF domain LA08_01410 PF08446 PAS fold LA08_01410 PF08448 PAS fold LA08_01460 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LA08_01460 PF06827 Zinc finger found in FPG and IleRS LA08_01460 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LA08_01470 PF12760 Transposase zinc-ribbon domain LA08_01470 PF12762 LA08_01470 LA08_01485 PF04333 LA08_01485 LA08_01490 PF13466 STAS domain LA08_01495 PF05494 Toluene tolerance, Ttg2 LA08_01500 PF02470 LA08_01500 LA08_01505 PF02405 LA08_01505 LA08_01510 PF00005 ABC transporter LA08_01520 PF13508 Acetyltransferase (GNAT) domain LA08_01525 PF12760 Transposase zinc-ribbon domain LA08_01525 PF12762 LA08_01525 LA08_01535 PF00665 Integrase core domain LA08_01535 PF13936 Helix-turn-helix domain LA08_01550 PF01609 Transposase DDE domain LA08_01560 PF01610 LA08_01560 LA08_01560 PF13542 LA08_01560 LA08_01585 PF13360 PQQ-like domain LA08_01600 PF13671 AAA domain LA08_01605 PF13347 MFS/sugar transport protein LA08_01610 PF06165 Glycosyltransferase family 36 LA08_01610 PF17167 LA08_01610 LA08_01615 PF15979 LA08_01615 LA08_01625 PF00072 Response regulator receiver domain LA08_01625 PF00512 His Kinase A (phospho-acceptor) domain LA08_01625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA08_01625 PF12860 LA08_01625 LA08_01630 PF02659 LA08_01630 LA08_01635 PF01614 Bacterial transcriptional regulator LA08_01635 PF09339 IclR helix-turn-helix domain LA08_01640 PF07690 Major Facilitator Superfamily LA08_01645 PF05336 Domain of unknown function (DUF718) LA08_01650 PF05598 LA08_01650 LA08_01660 PF12760 Transposase zinc-ribbon domain LA08_01660 PF12762 LA08_01660 LA08_01675 PF01432 Peptidase family M3 LA08_01690 PF01553 Acyltransferase LA08_01695 PF00472 RF-1 domain LA08_01700 PF09832 Uncharacterized protein conserved in bacteria (DUF2059) LA08_01705 PF00849 RNA pseudouridylate synthase LA08_01710 PF07883 Cupin domain LA08_01715 PF03109 LA08_01715 LA08_01720 PF02036 SCP-2 sterol transfer family LA08_01785 PF12760 Transposase zinc-ribbon domain LA08_01785 PF12762 LA08_01785 LA08_01795 PF01609 Transposase DDE domain LA08_01795 PF05598 LA08_01795 LA08_01815 PF02558 Ketopantoate reductase PanE/ApbA LA08_01815 PF08546 Ketopantoate reductase PanE/ApbA C terminal LA08_01820 PF12686 LA08_01820 LA08_01825 PF01061 LA08_01825 LA08_01830 PF00005 ABC transporter LA08_01835 PF00175 Oxidoreductase NAD-binding domain LA08_01835 PF00970 Oxidoreductase FAD-binding domain LA08_01840 PF01545 Cation efflux family LA08_01845 PF02583 Metal-sensitive transcriptional repressor LA08_01855 PF01381 Helix-turn-helix LA08_01860 PF08386 TAP-like protein LA08_01865 PF00005 ABC transporter LA08_01870 PF12679 LA08_01870 LA08_01875 PF03544 Gram-negative bacterial TonB protein C-terminal LA08_01880 PF04820 Tryptophan halogenase LA08_01885 PF13621 Cupin-like domain LA08_01890 PF07277 LA08_01890 LA08_01895 PF00593 TonB dependent receptor LA08_01895 PF07715 TonB-dependent Receptor Plug Domain LA08_01905 PF00043 Glutathione S-transferase, C-terminal domain LA08_01905 PF02798 Glutathione S-transferase, N-terminal domain LA08_01915 PF00326 Prolyl oligopeptidase family LA08_01915 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region LA08_01925 PF05960 Bacterial protein of unknown function (DUF885) LA08_01940 PF00490 Delta-aminolevulinic acid dehydratase LA08_01955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA08_01955 PF03466 LysR substrate binding domain LA08_01960 PF01223 DNA/RNA non-specific endonuclease LA08_01965 PF00175 Oxidoreductase NAD-binding domain LA08_01965 PF00258 Flavodoxin LA08_01965 PF03929 LA08_01965 LA08_01975 PF07676 WD40-like Beta Propeller Repeat LA08_01980 PF01488 Shikimate / quinate 5-dehydrogenase LA08_01980 PF08501 Shikimate dehydrogenase substrate binding domain LA08_01990 PF13307 Helicase C-terminal domain LA08_02000 PF12760 Transposase zinc-ribbon domain LA08_02000 PF12762 LA08_02000 LA08_02010 PF13437 HlyD family secretion protein LA08_02015 PF00199 Catalase LA08_02015 PF06628 Catalase-related immune-responsive LA08_02020 PF12796 Ankyrin repeats (3 copies) LA08_02040 PF01207 Dihydrouridine synthase (Dus) LA08_02050 PF00072 Response regulator receiver domain LA08_02050 PF00486 Transcriptional regulatory protein, C terminal LA08_02055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA08_02060 PF08811 LA08_02060 LA08_02065 PF07394 LA08_02065 LA08_02080 PF02237 Biotin protein ligase C terminal domain LA08_02080 PF03099 Biotin/lipoate A/B protein ligase family LA08_02080 PF08279 HTH domain LA08_02085 PF03309 Type III pantothenate kinase LA08_02090 PF05036 Sporulation related domain LA08_02100 PF02223 Thymidylate kinase LA08_02125 PF00491 Arginase family LA08_02130 PF08085 LA08_02130 LA08_02135 PF08085 LA08_02135 LA08_02140 PF05532 CsbD-like LA08_02145 PF00579 tRNA synthetases class I (W and Y) LA08_02145 PF07411 Domain of unknown function (DUF1508) LA08_02150 PF00753 Metallo-beta-lactamase superfamily LA08_02160 PF02225 PA domain LA08_02160 PF04389 Peptidase family M28 LA08_02180 PF00892 EamA-like transporter family LA08_02185 PF12697 Alpha/beta hydrolase family LA08_02195 PF01292 Prokaryotic cytochrome b561 LA08_02200 PF00199 Catalase LA08_02205 PF04542 Sigma-70 region 2 LA08_02205 PF08281 Sigma-70, region 4 LA08_02215 PF00883 Cytosol aminopeptidase family, catalytic domain LA08_02220 PF13419 Haloacid dehalogenase-like hydrolase LA08_02225 PF01594 LA08_02225 LA08_02240 PF01040 UbiA prenyltransferase family LA08_02245 PF00156 Phosphoribosyl transferase domain LA08_02250 PF04055 Radical SAM superfamily LA08_02250 PF06968 Biotin and Thiamin Synthesis associated domain LA08_02255 PF00155 Aminotransferase class I and II LA08_02270 PF13561 Enoyl-(Acyl carrier protein) reductase LA08_02280 PF01494 FAD binding domain LA08_02285 PF00535 Glycosyl transferase family 2 LA08_02290 PF13723 LA08_02290 LA08_02295 PF00109 Beta-ketoacyl synthase, N-terminal domain LA08_02295 PF02801 Beta-ketoacyl synthase, C-terminal domain LA08_02300 PF05166 YcgL domain LA08_02305 PF00023 Ankyrin repeat LA08_02305 PF12796 Ankyrin repeats (3 copies) LA08_02315 PF00723 Glycosyl hydrolases family 15 LA08_02320 PF01610 LA08_02320 LA08_02320 PF13542 LA08_02320 LA08_02325 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LA08_02325 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LA08_02330 PF13546 LA08_02330 LA08_02340 PF00999 Sodium/hydrogen exchanger family LA08_02340 PF02254 TrkA-N domain LA08_02345 PF00571 CBS domain LA08_02345 PF01769 Divalent cation transporter LA08_02345 PF03448 MgtE intracellular N domain LA08_02355 PF13302 Acetyltransferase (GNAT) domain LA08_02355 PF13380 CoA binding domain LA08_02355 PF13549 ATP-grasp domain LA08_02355 PF13607 Succinyl-CoA ligase like flavodoxin domain LA08_02360 PF04332 LA08_02360 LA08_02365 PF00317 Ribonucleotide reductase, all-alpha domain LA08_02365 PF02867 Ribonucleotide reductase, barrel domain LA08_02375 PF00268 Ribonucleotide reductase, small chain LA08_02380 PF06114 Domain of unknown function (DUF955) LA08_02390 PF00085 Thioredoxin LA08_02405 PF00108 Thiolase, N-terminal domain LA08_02405 PF02803 Thiolase, C-terminal domain LA08_02410 PF00775 Dioxygenase LA08_02410 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal LA08_02415 PF00775 Dioxygenase LA08_02425 PF00206 Lyase LA08_02425 PF10397 Adenylosuccinate lyase C-terminus LA08_02430 PF00561 alpha/beta hydrolase fold LA08_02435 PF02627 Carboxymuconolactone decarboxylase family LA08_02440 PF13358 DDE superfamily endonuclease LA08_02440 PF13551 Winged helix-turn helix LA08_02440 PF13592 LA08_02440 LA08_02445 PF12146 Putative lysophospholipase LA08_02455 PF01163 RIO1 family LA08_02465 PF00106 short chain dehydrogenase LA08_02475 PF05036 Sporulation related domain LA08_02480 PF00750 tRNA synthetases class I (R) LA08_02480 PF03485 Arginyl tRNA synthetase N terminal domain LA08_02480 PF05746 DALR anticodon binding domain LA08_02485 PF04002 RadC-like JAB domain LA08_02490 PF02441 Flavoprotein LA08_02490 PF04127 DNA / pantothenate metabolism flavoprotein LA08_02495 PF00692 dUTPase LA08_02500 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LA08_02500 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LA08_02500 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LA08_02500 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LA08_02510 PF07578 Lipid A Biosynthesis N-terminal domain LA08_02515 PF00535 Glycosyl transferase family 2 LA08_02520 PF01370 NAD dependent epimerase/dehydratase family LA08_02525 PF11731 LA08_02525 LA08_02530 PF02195 ParB-like nuclease domain LA08_02535 PF13614 AAA domain LA08_02545 PF00156 Phosphoribosyl transferase domain LA08_02550 PF03372 Endonuclease/Exonuclease/phosphatase family LA08_02555 PF07690 Major Facilitator Superfamily LA08_02565 PF03702 Uncharacterised protein family (UPF0075) LA08_02570 PF01551 Peptidase family M23 LA08_02570 PF04225 Opacity-associated protein A LysM-like domain LA08_02575 PF00579 tRNA synthetases class I (W and Y) LA08_02615 PF00072 Response regulator receiver domain LA08_02615 PF00512 His Kinase A (phospho-acceptor) domain LA08_02615 PF01627 Hpt domain LA08_02615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA08_02620 PF00072 Response regulator receiver domain LA08_02620 PF00563 EAL domain LA08_02620 PF00990 GGDEF domain LA08_02625 PF13548 LA08_02625 LA08_02635 PF04519 LA08_02635 LA08_02640 PF04519 LA08_02640 LA08_02645 PF01521 Iron-sulphur cluster biosynthesis LA08_02650 PF03583 Secretory lipase LA08_02655 PF00293 NUDIX domain LA08_02655 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain LA08_02655 PF09297 NADH pyrophosphatase zinc ribbon domain LA08_02660 PF03186 LA08_02660 LA08_02670 PF10825 LA08_02670 LA08_02675 PF04505 LA08_02675 LA08_02685 PF01553 Acyltransferase LA08_02685 PF07690 Major Facilitator Superfamily LA08_02700 PF12805 LA08_02700 LA08_02700 PF13515 LA08_02700 LA08_02705 PF14103 LA08_02705 LA08_02710 PF13304 AAA domain LA08_02715 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LA08_02715 PF02843 Phosphoribosylglycinamide synthetase, C domain LA08_02715 PF02844 Phosphoribosylglycinamide synthetase, N domain LA08_02720 PF14103 LA08_02720 LA08_02725 PF13304 AAA domain LA08_02730 PF01808 AICARFT/IMPCHase bienzyme LA08_02730 PF02142 MGS-like domain LA08_02740 PF12146 Putative lysophospholipase LA08_02750 PF12147 LA08_02750 LA08_02770 PF02954 Bacterial regulatory protein, Fis family LA08_02775 PF11906 LA08_02775 LA08_02785 PF01381 Helix-turn-helix LA08_02800 PF06325 Ribosomal protein L11 methyltransferase (PrmA) LA08_02830 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain LA08_02830 PF02785 Biotin carboxylase C-terminal domain LA08_02830 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LA08_02835 PF05635 23S rRNA-intervening sequence protein LA08_02840 PF00364 Biotin-requiring enzyme LA08_02845 PF01220 Dehydroquinase class II LA08_02860 PF02683 LA08_02860 LA08_02860 PF11412 Disulphide bond corrector protein DsbC LA08_02860 PF13899 Thioredoxin-like LA08_02865 PF03091 CutA1 divalent ion tolerance protein LA08_02870 PF12760 Transposase zinc-ribbon domain LA08_02870 PF12762 LA08_02870 LA08_02880 PF13546 LA08_02880 LA08_02895 PF01548 LA08_02895 LA08_02900 PF00270 DEAD/DEAH box helicase LA08_02900 PF00271 Helicase conserved C-terminal domain LA08_02910 PF11304 LA08_02910 LA08_02930 PF01554 MatE LA08_02935 PF01343 Peptidase family S49 LA08_02945 PF13561 Enoyl-(Acyl carrier protein) reductase LA08_02960 PF01300 Telomere recombination LA08_02965 PF01131 DNA topoisomerase LA08_02965 PF01751 Toprim domain LA08_02965 PF13368 LA08_02965 LA08_02970 PF06271 LA08_02970 LA08_02970 PF14237 LA08_02970 LA08_02975 PF00114 Pilin (bacterial filament) LA08_02975 PF14237 LA08_02975 LA08_02980 PF04361 LA08_02980 LA08_02985 PF02481 DNA recombination-mediator protein A LA08_02990 PF01476 LysM domain LA08_02995 PF01327 Polypeptide deformylase LA08_03000 PF00551 Formyl transferase LA08_03000 PF02911 Formyl transferase, C-terminal domain LA08_03005 PF01029 NusB family LA08_03005 PF01189 NOL1/NOP2/sun family LA08_03010 PF13231 LA08_03010 LA08_03015 PF04932 LA08_03015 LA08_03020 PF00535 Glycosyl transferase family 2 LA08_03025 PF02350 UDP-N-acetylglucosamine 2-epimerase LA08_03030 PF03703 LA08_03030 LA08_03035 PF03703 LA08_03035 LA08_03040 PF00925 GTP cyclohydrolase II LA08_03045 PF13420 Acetyltransferase (GNAT) domain LA08_03055 PF03279 LA08_03055 LA08_03060 PF02580 D-Tyr-tRNA(Tyr) deacylase LA08_03065 PF00140 Sigma-70 factor, region 1 LA08_03065 PF03979 Sigma-70 factor, region 1 LA08_03065 PF04539 Sigma-70 region 3 LA08_03065 PF04542 Sigma-70 region 2 LA08_03065 PF04545 Sigma-70, region 4 LA08_03065 PF04546 Sigma-70, non-essential region LA08_03120 PF01610 LA08_03120 LA08_03120 PF13542 LA08_03120 LA08_03135 PF12760 Transposase zinc-ribbon domain LA08_03135 PF12762 LA08_03135 LA08_03150 PF00005 ABC transporter LA08_03155 PF12040 LA08_03155 LA08_03155 PF12679 LA08_03155 LA08_03160 PF12040 LA08_03160 LA08_03165 PF00593 TonB dependent receptor LA08_03165 PF07715 TonB-dependent Receptor Plug Domain LA08_03170 PF11445 LA08_03170 LA08_03175 PF00691 OmpA family LA08_03180 PF05650 LA08_03180 LA08_03185 PF11828 LA08_03185 LA08_03200 PF03692 LA08_03200 LA08_03220 PF02322 LA08_03220 LA08_03225 PF01654 LA08_03225 LA08_03240 PF00072 Response regulator receiver domain LA08_03240 PF00158 Sigma-54 interaction domain LA08_03240 PF02954 Bacterial regulatory protein, Fis family LA08_03265 PF01266 FAD dependent oxidoreductase LA08_03270 PF06580 LA08_03270 LA08_03285 PF13520 Amino acid permease LA08_03300 PF09995 LA08_03300 LA08_03305 PF01431 Peptidase family M13 LA08_03305 PF05649 Peptidase family M13 LA08_03310 PF00535 Glycosyl transferase family 2 LA08_03320 PF00248 Aldo/keto reductase family LA08_03325 PF03358 NADPH-dependent FMN reductase LA08_03330 PF07681 LA08_03330 LA08_03335 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LA08_03340 PF04055 Radical SAM superfamily LA08_03345 PF03167 Uracil DNA glycosylase superfamily LA08_03345 PF13566 LA08_03345 LA08_03355 PF02469 Fasciclin domain LA08_03370 PF00999 Sodium/hydrogen exchanger family LA08_03375 PF00005 ABC transporter LA08_03380 PF01061 LA08_03380 LA08_03385 PF11730 LA08_03385 LA08_03395 PF00082 Subtilase family LA08_03395 PF04151 Bacterial pre-peptidase C-terminal domain LA08_03400 PF03895 YadA-like C-terminal region LA08_03400 PF05658 Head domain of trimeric autotransporter adhesin LA08_03400 PF05662 Coiled stalk of trimeric autotransporter adhesin LA08_03405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA08_03410 PF00072 Response regulator receiver domain LA08_03410 PF00486 Transcriptional regulatory protein, C terminal LA08_03415 PF13223 LA08_03415 LA08_03430 PF00691 OmpA family LA08_03430 PF13677 LA08_03430 LA08_03435 PF01618 LA08_03435 LA08_03440 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme LA08_03445 PF01641 SelR domain LA08_03455 PF01037 AsnC family LA08_03455 PF13404 AsnC-type helix-turn-helix domain LA08_03460 PF01266 FAD dependent oxidoreductase LA08_03465 PF00842 Alanine racemase, C-terminal domain LA08_03465 PF01168 Alanine racemase, N-terminal domain LA08_03470 PF11454 LA08_03470 LA08_03485 PF00072 Response regulator receiver domain LA08_03485 PF00512 His Kinase A (phospho-acceptor) domain LA08_03485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA08_03485 PF08448 PAS fold LA08_03485 PF13188 PAS domain LA08_03495 PF11607 Protein of unknown function (DUF3247) LA08_03500 PF07995 Glucose / Sorbosone dehydrogenase LA08_03520 PF05175 Methyltransferase small domain LA08_03525 PF00849 RNA pseudouridylate synthase LA08_03530 PF13419 Haloacid dehalogenase-like hydrolase LA08_03535 PF13561 Enoyl-(Acyl carrier protein) reductase LA08_03540 PF07209 LA08_03540 LA08_03560 PF04461 Protein of unknown function (DUF520) LA08_03565 PF00892 EamA-like transporter family LA08_03570 PF00005 ABC transporter LA08_03570 PF09383 NIL domain LA08_03575 PF00528 Binding-protein-dependent transport system inner membrane component LA08_03580 PF03180 NLPA lipoprotein LA08_03585 PF07301 LA08_03585 LA08_03590 PF03922 OmpW family LA08_03595 PF03167 Uracil DNA glycosylase superfamily LA08_03600 PF11101 LA08_03600 LA08_03605 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LA08_03605 PF00364 Biotin-requiring enzyme LA08_03605 PF02817 e3 binding domain LA08_03615 PF00364 Biotin-requiring enzyme LA08_03615 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LA08_03615 PF07992 Pyridine nucleotide-disulphide oxidoreductase LA08_03635 PF00119 ATP synthase A chain LA08_03640 PF00137 ATP synthase subunit C LA08_03645 PF00430 ATP synthase B/B' CF(0) LA08_03650 PF00213 ATP synthase delta (OSCP) subunit LA08_03655 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LA08_03655 PF00306 ATP synthase alpha/beta chain, C terminal domain LA08_03655 PF02874 ATP synthase alpha/beta family, beta-barrel domain LA08_03660 PF00231 ATP synthase LA08_03665 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LA08_03665 PF02874 ATP synthase alpha/beta family, beta-barrel domain LA08_03670 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LA08_03675 PF01817 Chorismate mutase type II LA08_03685 PF04138 LA08_03685 LA08_03690 PF00132 Bacterial transferase hexapeptide (six repeats) LA08_03690 PF12804 MobA-like NTP transferase domain LA08_03690 PF14602 Hexapeptide repeat of succinyl-transferase LA08_03705 PF12760 Transposase zinc-ribbon domain LA08_03705 PF12762 LA08_03705 LA08_03725 PF16576 LA08_03725 LA08_03730 PF01380 SIS domain LA08_03730 PF13522 Glutamine amidotransferase domain LA08_03750 PF13358 DDE superfamily endonuclease LA08_03750 PF13551 Winged helix-turn helix LA08_03750 PF13592 LA08_03750 LA08_03760 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LA08_03765 PF05275 LA08_03765 LA08_03770 PF00394 Multicopper oxidase LA08_03770 PF07731 Multicopper oxidase LA08_03770 PF07732 Multicopper oxidase LA08_03780 PF00291 Pyridoxal-phosphate dependent enzyme LA08_03785 PF01432 Peptidase family M3 LA08_03795 PF00109 Beta-ketoacyl synthase, N-terminal domain LA08_03795 PF02801 Beta-ketoacyl synthase, C-terminal domain LA08_03800 PF07977 FabA-like domain LA08_03810 PF00817 impB/mucB/samB family LA08_03810 PF11799 impB/mucB/samB family C-terminal domain LA08_03815 PF13419 Haloacid dehalogenase-like hydrolase LA08_03820 PF04994 TfoX C-terminal domain LA08_03825 PF13185 GAF domain LA08_03830 PF13500 AAA domain LA08_03835 PF09361 LA08_03835 LA08_03840 PF01242 6-pyruvoyl tetrahydropterin synthase LA08_03850 PF00270 DEAD/DEAH box helicase LA08_03850 PF00271 Helicase conserved C-terminal domain LA08_03860 PF01557 Fumarylacetoacetate (FAA) hydrolase family LA08_03865 PF13417 Glutathione S-transferase, N-terminal domain LA08_03870 PF00437 Type II/IV secretion system protein LA08_03875 PF14346 Domain of unknown function (DUF4398) LA08_03885 PF04325 Protein of unknown function (DUF465) LA08_03890 PF00291 Pyridoxal-phosphate dependent enzyme LA08_03890 PF00571 CBS domain LA08_03895 PF01053 Cys/Met metabolism PLP-dependent enzyme LA08_03900 PF05050 Methyltransferase FkbM domain LA08_03905 PF01370 NAD dependent epimerase/dehydratase family LA08_03910 PF00534 Glycosyl transferases group 1 LA08_03920 PF00535 Glycosyl transferase family 2 LA08_03925 PF01757 LA08_03925 LA08_03930 PF13546 LA08_03930 LA08_03945 PF00872 LA08_03945 LA08_03955 PF00005 ABC transporter LA08_03955 PF14524 Wzt C-terminal domain LA08_03960 PF01061 LA08_03960 LA08_03965 PF00766 Electron transfer flavoprotein FAD-binding domain LA08_03965 PF01012 Electron transfer flavoprotein domain LA08_03970 PF01012 Electron transfer flavoprotein domain LA08_03975 PF16363 LA08_03975 LA08_03980 PF00483 Nucleotidyl transferase LA08_03985 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LA08_03990 PF04321 RmlD substrate binding domain LA08_03995 PF00483 Nucleotidyl transferase LA08_03995 PF01050 Mannose-6-phosphate isomerase LA08_04000 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LA08_04000 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LA08_04000 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LA08_04000 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LA08_04005 PF01144 Coenzyme A transferase LA08_04010 PF01144 Coenzyme A transferase LA08_04015 PF05045 LA08_04015 LA08_04015 PF14307 LA08_04015 LA08_04020 PF01946 Thi4 family LA08_04020 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase LA08_04025 PF13532 2OG-Fe(II) oxygenase superfamily LA08_04035 PF03886 Protein of unknown function (DUF330) LA08_04040 PF02470 LA08_04040 LA08_04045 PF00005 ABC transporter LA08_04050 PF02405 LA08_04050 LA08_04055 PF06738 LA08_04055 LA08_04055 PF12821 LA08_04055 LA08_04060 PF00816 H-NS histone family LA08_04065 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LA08_04065 PF03129 Anticodon binding domain LA08_04065 PF04073 Aminoacyl-tRNA editing domain LA08_04070 PF13511 LA08_04070 LA08_04075 PF01066 CDP-alcohol phosphatidyltransferase LA08_04085 PF00583 Acetyltransferase (GNAT) family LA08_04090 PF13546 LA08_04090 LA08_04100 PF13546 LA08_04100 LA08_04105 PF01609 Transposase DDE domain LA08_04105 PF05598 LA08_04105 LA08_04115 PF13546 LA08_04115 LA08_04120 PF01464 Transglycosylase SLT domain LA08_04120 PF14718 Soluble lytic murein transglycosylase L domain LA08_04125 PF00544 Pectate lyase LA08_04155 PF08241 Methyltransferase domain LA08_04175 PF00133 tRNA synthetases class I (I, L, M and V) LA08_04175 PF08264 Anticodon-binding domain of tRNA LA08_04175 PF10458 Valyl tRNA synthetase tRNA binding arm LA08_04180 PF04364 DNA polymerase III chi subunit, HolC LA08_04190 PF00883 Cytosol aminopeptidase family, catalytic domain LA08_04190 PF02789 Cytosol aminopeptidase family, N-terminal domain LA08_04195 PF03739 LA08_04195 LA08_04200 PF03739 LA08_04200 LA08_04210 PF06271 LA08_04210 LA08_04215 PF00589 Phage integrase family LA08_04215 PF02899 Phage integrase, N-terminal SAM-like domain LA08_04220 PF10411 Disulfide bond isomerase protein N-terminus LA08_04220 PF13098 Thioredoxin-like domain LA08_04225 PF02769 AIR synthase related protein, C-terminal domain LA08_04225 PF13507 CobB/CobQ-like glutamine amidotransferase domain LA08_04235 PF03895 YadA-like C-terminal region LA08_04235 PF05658 Head domain of trimeric autotransporter adhesin LA08_04235 PF05662 Coiled stalk of trimeric autotransporter adhesin LA08_04235 PF13018 LA08_04235 LA08_04245 PF00665 Integrase core domain LA08_04245 PF13936 Helix-turn-helix domain LA08_04255 PF00437 Type II/IV secretion system protein LA08_04255 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LA08_04265 PF00482 Type II secretion system (T2SS), protein F LA08_04270 PF08334 Type II secretion system (T2SS), protein G LA08_04275 PF12019 Type II transport protein GspH LA08_04280 PF07963 Prokaryotic N-terminal methylation motif LA08_04290 PF03934 Type II secretion system (T2SS), protein K LA08_04295 PF05137 LA08_04295 LA08_04300 PF10741 LA08_04300 LA08_04310 PF00263 LA08_04310 LA08_04310 PF03958 Bacterial type II/III secretion system short domain LA08_04325 PF00392 Bacterial regulatory proteins, gntR family LA08_04325 PF07702 UTRA domain LA08_04330 PF04973 LA08_04330 LA08_04340 PF00593 TonB dependent receptor LA08_04340 PF07715 TonB-dependent Receptor Plug Domain LA08_04345 PF01636 Phosphotransferase enzyme family LA08_04355 PF00535 Glycosyl transferase family 2 LA08_04380 PF09827 CRISPR associated protein Cas2 LA08_04385 PF01867 CRISPR associated protein Cas1 LA08_04390 PF01930 Domain of unknown function DUF83 LA08_04395 PF05107 LA08_04395 LA08_04400 PF09709 LA08_04400 LA08_04405 PF09704 CRISPR-associated protein (Cas_Cas5) LA08_04410 PF00270 DEAD/DEAH box helicase LA08_04415 PF12760 Transposase zinc-ribbon domain LA08_04415 PF12762 LA08_04415 LA08_04425 PF02545 Maf-like protein LA08_04430 PF02620 LA08_04430 LA08_04435 PF01783 Ribosomal L32p protein family LA08_04440 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LA08_04440 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LA08_04445 PF08670 LA08_04445 LA08_04450 PF00698 Acyl transferase domain LA08_04455 PF13561 Enoyl-(Acyl carrier protein) reductase LA08_04460 PF00550 Phosphopantetheine attachment site LA08_04465 PF00109 Beta-ketoacyl synthase, N-terminal domain LA08_04465 PF02801 Beta-ketoacyl synthase, C-terminal domain LA08_04470 PF00425 chorismate binding enzyme LA08_04470 PF04715 Anthranilate synthase component I, N terminal region LA08_04475 PF02618 YceG-like family LA08_04480 PF13177 DNA polymerase III, delta subunit LA08_04485 PF07238 PilZ domain LA08_04510 PF00158 Sigma-54 interaction domain LA08_04510 PF02954 Bacterial regulatory protein, Fis family LA08_04510 PF06506 Propionate catabolism activator LA08_04515 PF13714 Phosphoenolpyruvate phosphomutase LA08_04520 PF00285 Citrate synthase LA08_04525 PF00330 Aconitase family (aconitate hydratase) LA08_04525 PF00694 Aconitase C-terminal domain LA08_04540 PF04303 PrpF protein LA08_04545 PF01609 Transposase DDE domain LA08_04545 PF05598 LA08_04545 LA08_04550 PF00593 TonB dependent receptor LA08_04550 PF07715 TonB-dependent Receptor Plug Domain LA08_04555 PF01156 Inosine-uridine preferring nucleoside hydrolase LA08_04570 PF00593 TonB dependent receptor LA08_04570 PF07715 TonB-dependent Receptor Plug Domain LA08_04575 PF03009 Glycerophosphoryl diester phosphodiesterase family LA08_04575 PF16387 LA08_04575 LA08_04585 PF13546 LA08_04585 LA08_04595 PF00665 Integrase core domain LA08_04600 PF00210 Ferritin-like domain LA08_04605 PF08534 Redoxin LA08_04610 PF00011 Hsp20/alpha crystallin family LA08_04615 PF00226 DnaJ domain LA08_04615 PF01556 DnaJ C terminal domain LA08_04620 PF00072 Response regulator receiver domain LA08_04625 PF01145 SPFH domain / Band 7 family LA08_04630 PF01145 SPFH domain / Band 7 family LA08_04635 PF09838 LA08_04635 LA08_04640 PF00709 Adenylosuccinate synthetase LA08_04645 PF01433 Peptidase family M1 LA08_04645 PF11838 ERAP1-like C-terminal domain LA08_04650 PF08845 LA08_04650 LA08_04650 PF12760 Transposase zinc-ribbon domain LA08_04655 PF01609 Transposase DDE domain LA08_04655 PF05598 LA08_04655 LA08_04675 PF10882 LA08_04675 LA08_04680 PF10276 Zinc-finger domain LA08_04685 PF00534 Glycosyl transferases group 1 LA08_04685 PF13439 Glycosyltransferase Family 4 LA08_04690 PF04932 LA08_04690 LA08_04695 PF03279 LA08_04695 LA08_04700 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LA08_04705 PF02321 Outer membrane efflux protein LA08_04710 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) LA08_04715 PF00440 Bacterial regulatory proteins, tetR family LA08_04715 PF14246 AefR-like transcriptional repressor, C-terminal region LA08_04720 PF07494 Two component regulator propeller LA08_04730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA08_04730 PF03466 LysR substrate binding domain LA08_04735 PF00330 Aconitase family (aconitate hydratase) LA08_04740 PF00694 Aconitase C-terminal domain LA08_04750 PF00180 Isocitrate/isopropylmalate dehydrogenase LA08_04755 PF00682 HMGL-like LA08_04755 PF08502 LeuA allosteric (dimerisation) domain LA08_04760 PF00291 Pyridoxal-phosphate dependent enzyme LA08_04765 PF13710 ACT domain LA08_04770 PF00205 Thiamine pyrophosphate enzyme, central domain LA08_04770 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LA08_04770 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LA08_04775 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LA08_04775 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain LA08_04785 PF01964 ThiC family LA08_04785 PF13667 ThiC-associated domain LA08_04790 PF00486 Transcriptional regulatory protein, C terminal LA08_04790 PF07676 WD40-like Beta Propeller Repeat LA08_04795 PF12833 Helix-turn-helix domain LA08_04800 PF00593 TonB dependent receptor LA08_04800 PF07715 TonB-dependent Receptor Plug Domain LA08_04810 PF08668 HDOD domain LA08_04815 PF00719 Inorganic pyrophosphatase LA08_04830 PF12760 Transposase zinc-ribbon domain LA08_04830 PF12762 LA08_04830 LA08_04835 PF03030 Inorganic H+ pyrophosphatase LA08_04855 PF00365 Phosphofructokinase LA08_04860 PF00406 Adenylate kinase LA08_04865 PF01225 Mur ligase family, catalytic domain LA08_04865 PF02875 Mur ligase family, glutamate ligase domain LA08_04865 PF08245 Mur ligase middle domain LA08_04870 PF02190 ATP-dependent protease La (LON) domain LA08_04875 PF01062 LA08_04875 LA08_04895 PF00043 Glutathione S-transferase, C-terminal domain LA08_04895 PF02798 Glutathione S-transferase, N-terminal domain LA08_04900 PF00056 lactate/malate dehydrogenase, NAD binding domain LA08_04900 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LA08_04905 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LA08_04910 PF00009 Elongation factor Tu GTP binding domain LA08_04910 PF00679 Elongation factor G C-terminus LA08_04910 PF03144 Elongation factor Tu domain 2 LA08_04915 PF09900 LA08_04915 LA08_04925 PF00924 Mechanosensitive ion channel LA08_04930 PF01474 Class-II DAHP synthetase family LA08_04935 PF00593 TonB dependent receptor LA08_04935 PF07715 TonB-dependent Receptor Plug Domain LA08_04940 PF02600 Disulfide bond formation protein DsbB LA08_04960 PF01610 LA08_04960 LA08_04960 PF13542 LA08_04960 LA08_04970 PF00089 Trypsin LA08_05005 PF01610 LA08_05005 LA08_05005 PF13542 LA08_05005 LA08_05015 PF13546 LA08_05015 LA08_05025 PF00665 Integrase core domain LA08_05025 PF13936 Helix-turn-helix domain LA08_05035 PF12760 Transposase zinc-ribbon domain LA08_05035 PF12762 LA08_05035 LA08_05065 PF01609 Transposase DDE domain LA08_05065 PF05598 LA08_05065 LA08_05075 PF07486 Cell Wall Hydrolase LA08_05080 PF16387 LA08_05080 LA08_05090 PF03009 Glycerophosphoryl diester phosphodiesterase family LA08_05110 PF12760 Transposase zinc-ribbon domain LA08_05110 PF12762 LA08_05110 LA08_05115 PF00180 Isocitrate/isopropylmalate dehydrogenase LA08_05120 PF12811 LA08_05120 LA08_05170 PF05697 Bacterial trigger factor protein (TF) LA08_05170 PF05698 Bacterial trigger factor protein (TF) C-terminus LA08_05175 PF00574 Clp protease LA08_05180 PF06689 ClpX C4-type zinc finger LA08_05180 PF07724 AAA domain (Cdc48 subfamily) LA08_05180 PF10431 C-terminal, D2-small domain, of ClpB protein LA08_05185 PF00004 ATPase family associated with various cellular activities (AAA) LA08_05185 PF02190 ATP-dependent protease La (LON) domain LA08_05185 PF05362 Lon protease (S16) C-terminal proteolytic domain LA08_05190 PF00216 Bacterial DNA-binding protein LA08_05210 PF13616 PPIC-type PPIASE domain LA08_05210 PF13623 LA08_05210 LA08_05215 PF01464 Transglycosylase SLT domain LA08_05215 PF01476 LysM domain LA08_05220 PF00753 Metallo-beta-lactamase superfamily LA08_05220 PF16123 LA08_05220 LA08_05230 PF00075 RNase H LA08_05235 PF00929 Exonuclease LA08_05245 PF13672 Protein phosphatase 2C LA08_05270 PF05954 Phage late control gene D protein (GPD) LA08_05270 PF10106 LA08_05270 LA08_05270 PF13296 LA08_05270 LA08_05275 PF11678 LA08_05275 LA08_05280 PF11394 LA08_05280 LA08_05290 PF11678 LA08_05290 LA08_05295 PF11394 LA08_05295 LA08_05300 PF05488 PAAR motif LA08_05305 PF11678 LA08_05305 LA08_05310 PF11394 LA08_05310 LA08_05315 PF05488 PAAR motif LA08_05325 PF12760 Transposase zinc-ribbon domain LA08_05325 PF12762 LA08_05325 LA08_05330 PF00589 Phage integrase family LA08_05340 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LA08_05345 PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family LA08_05350 PF12706 Beta-lactamase superfamily domain LA08_05355 PF04055 Radical SAM superfamily LA08_05355 PF06463 Molybdenum Cofactor Synthesis C LA08_05355 PF13353 4Fe-4S single cluster domain LA08_05360 PF14534 Domain of unknown function (DUF4440) LA08_05365 PF01967 MoaC family LA08_05370 PF02597 ThiS family LA08_05375 PF02391 MoaE protein LA08_05390 PF12169 DNA polymerase III subunits gamma and tau domain III LA08_05390 PF12170 DNA polymerase III tau subunit V interacting with alpha LA08_05390 PF13177 DNA polymerase III, delta subunit LA08_05395 PF02575 YbaB/EbfC DNA-binding family LA08_05400 PF02132 RecR protein LA08_05400 PF13662 Toprim domain LA08_05405 PF01230 HIT domain LA08_05410 PF03843 LA08_05410 LA08_05415 PF01841 Transglutaminase-like superfamily LA08_05415 PF11992 LA08_05415 LA08_05420 PF01882 LA08_05420 LA08_05425 PF07726 ATPase family associated with various cellular activities (AAA) LA08_05430 PF13231 LA08_05430 LA08_05445 PF01327 Polypeptide deformylase LA08_05455 PF01670 Glycosyl hydrolase family 12 LA08_05465 PF01670 Glycosyl hydrolase family 12 LA08_05475 PF09284 Rhamnogalacturonase B, N-terminal LA08_05475 PF14683 Polysaccharide lyase family 4, domain III LA08_05475 PF14686 Polysaccharide lyase family 4, domain II LA08_05485 PF01610 LA08_05485 LA08_05485 PF13542 LA08_05485 LA08_05495 PF01609 Transposase DDE domain LA08_05495 PF05598 LA08_05495 LA08_05510 PF14487 LA08_05510 LA08_05515 PF13546 LA08_05515 LA08_05520 PF14487 LA08_05520 LA08_05525 PF00462 Glutaredoxin LA08_05525 PF00581 Rhodanese-like domain LA08_05530 PF01522 Polysaccharide deacetylase LA08_05540 PF08242 Methyltransferase domain LA08_05545 PF13472 GDSL-like Lipase/Acylhydrolase family LA08_05550 PF00155 Aminotransferase class I and II LA08_05555 PF03193 Protein of unknown function, DUF258 LA08_05560 PF08014 LA08_05560 LA08_05565 PF01965 DJ-1/PfpI family LA08_05570 PF00128 Alpha amylase, catalytic domain LA08_05575 PF00593 TonB dependent receptor LA08_05575 PF07715 TonB-dependent Receptor Plug Domain LA08_05580 PF07690 Major Facilitator Superfamily LA08_05590 PF00356 Bacterial regulatory proteins, lacI family LA08_05590 PF13377 Periplasmic binding protein-like domain LA08_05595 PF13561 Enoyl-(Acyl carrier protein) reductase LA08_05600 PF03600 Citrate transporter LA08_05610 PF07396 Phosphate-selective porin O and P LA08_05615 PF00072 Response regulator receiver domain LA08_05615 PF00486 Transcriptional regulatory protein, C terminal LA08_05620 PF00512 His Kinase A (phospho-acceptor) domain LA08_05620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA08_05620 PF08521 LA08_05620 LA08_05625 PF13531 Bacterial extracellular solute-binding protein LA08_05630 PF00072 Response regulator receiver domain LA08_05630 PF00196 Bacterial regulatory proteins, luxR family LA08_05635 PF12680 SnoaL-like domain LA08_05640 PF00248 Aldo/keto reductase family LA08_05650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA08_05650 PF03466 LysR substrate binding domain LA08_05655 PF13531 Bacterial extracellular solute-binding protein LA08_05660 PF00083 Sugar (and other) transporter LA08_05665 PF00072 Response regulator receiver domain LA08_05665 PF00512 His Kinase A (phospho-acceptor) domain LA08_05665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA08_05665 PF02743 Cache domain LA08_05665 PF12860 LA08_05665 LA08_05675 PF07396 Phosphate-selective porin O and P LA08_05680 PF00375 Sodium:dicarboxylate symporter family LA08_05685 PF00390 Malic enzyme, N-terminal domain LA08_05685 PF01515 Phosphate acetyl/butaryl transferase LA08_05685 PF03949 Malic enzyme, NAD binding domain LA08_05720 PF02581 Thiamine monophosphate synthase/TENI LA08_05725 PF00301 Rubredoxin LA08_05730 PF13369 LA08_05730 LA08_05730 PF13371 Tetratricopeptide repeat LA08_05735 PF02643 Uncharacterized ACR, COG1430 LA08_05740 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LA08_05745 PF01878 EVE domain LA08_05750 PF01812 5-formyltetrahydrofolate cyclo-ligase family LA08_05760 PF05164 Cell division protein ZapA LA08_05770 PF03695 Uncharacterised protein family (UPF0149) LA08_05775 PF00557 Metallopeptidase family M24 LA08_05775 PF05195 Aminopeptidase P, N-terminal domain LA08_05795 PF00557 Metallopeptidase family M24 LA08_05800 PF07238 PilZ domain LA08_05805 PF07793 LA08_05805 LA08_05810 PF04055 Radical SAM superfamily LA08_05810 PF06969 HemN C-terminal domain LA08_05815 PF01725 Ham1 family LA08_05820 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LA08_05825 PF01138 3' exoribonuclease family, domain 1 LA08_05825 PF03725 3' exoribonuclease family, domain 2 LA08_05830 PF03755 LA08_05830 LA08_05830 PF08340 LA08_05830 LA08_05835 PF00625 Guanylate kinase LA08_05850 PF01192 RNA polymerase Rpb6 LA08_05855 PF02824 TGS domain LA08_05855 PF04607 Region found in RelA / SpoT proteins LA08_05855 PF13291 ACT domain LA08_05855 PF13328 HD domain LA08_05860 PF01042 Endoribonuclease L-PSP LA08_05865 PF00270 DEAD/DEAH box helicase LA08_05865 PF00271 Helicase conserved C-terminal domain LA08_05865 PF17191 LA08_05865 LA08_05870 PF01156 Inosine-uridine preferring nucleoside hydrolase LA08_05875 PF01197 Ribosomal protein L31 LA08_05880 PF00285 Citrate synthase LA08_05890 PF00905 Penicillin binding protein transpeptidase domain LA08_05890 PF00912 Transglycosylase LA08_05890 PF17092 LA08_05890 LA08_05895 PF11104 Type IV pilus assembly protein PilM; LA08_05900 PF05137 LA08_05900 LA08_05905 PF04350 Pilus assembly protein, PilO LA08_05910 PF04351 Pilus assembly protein, PilP LA08_05915 PF00263 LA08_05915 LA08_05915 PF03958 Bacterial type II/III secretion system short domain LA08_05915 PF07660 Secretin and TonB N terminus short domain LA08_05925 PF01610 LA08_05925 LA08_05925 PF13542 LA08_05925 LA08_05930 PF13358 DDE superfamily endonuclease LA08_05930 PF13551 Winged helix-turn helix LA08_05930 PF13592 LA08_05930 LA08_05940 PF07726 ATPase family associated with various cellular activities (AAA) LA08_05945 PF01882 LA08_05945 LA08_05950 PF14316 LA08_05950 LA08_05955 PF00092 von Willebrand factor type A domain LA08_05960 PF00515 Tetratricopeptide repeat LA08_05960 PF13519 von Willebrand factor type A domain LA08_05965 PF13584 LA08_05965 LA08_05975 PF12395 LA08_05975 LA08_05980 PF00375 Sodium:dicarboxylate symporter family LA08_05985 PF00456 Transketolase, thiamine diphosphate binding domain LA08_05985 PF02779 Transketolase, pyrimidine binding domain LA08_05985 PF02780 Transketolase, C-terminal domain LA08_05995 PF01551 Peptidase family M23 LA08_06000 PF01471 Putative peptidoglycan binding domain LA08_06000 PF03734 L,D-transpeptidase catalytic domain LA08_06005 PF00593 TonB dependent receptor LA08_06005 PF07715 TonB-dependent Receptor Plug Domain LA08_06010 PF16670 LA08_06010 LA08_06015 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain LA08_06020 PF12261 LA08_06020 LA08_06025 PF00501 AMP-binding enzyme LA08_06030 PF14518 Iron-containing redox enzyme LA08_06035 PF00106 short chain dehydrogenase LA08_06045 PF00072 Response regulator receiver domain LA08_06045 PF00486 Transcriptional regulatory protein, C terminal LA08_06050 PF00512 His Kinase A (phospho-acceptor) domain LA08_06050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA08_06050 PF08521 LA08_06050 LA08_06055 PF03965 Penicillinase repressor LA08_06060 PF03544 Gram-negative bacterial TonB protein C-terminal LA08_06060 PF05569 BlaR1 peptidase M56 LA08_06070 PF00005 ABC transporter LA08_06075 PF00528 Binding-protein-dependent transport system inner membrane component LA08_06080 PF13531 Bacterial extracellular solute-binding protein LA08_06085 PF00753 Metallo-beta-lactamase superfamily LA08_06090 PF02265 S1/P1 Nuclease LA08_06120 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LA08_06120 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LA08_06135 PF12760 Transposase zinc-ribbon domain LA08_06135 PF12762 LA08_06135 LA08_06140 PF00512 His Kinase A (phospho-acceptor) domain LA08_06140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA08_06145 PF00072 Response regulator receiver domain LA08_06145 PF00486 Transcriptional regulatory protein, C terminal LA08_06155 PF08443 RimK-like ATP-grasp domain LA08_06165 PF01569 PAP2 superfamily LA08_06165 PF09335 LA08_06165 LA08_06165 PF14067 LA08_06165 LA08_06185 PF12889 Protein of unknown function (DUF3829) LA08_06190 PF12889 Protein of unknown function (DUF3829) LA08_06195 PF00520 Ion transport protein LA08_06200 PF00202 Aminotransferase class-III LA08_06205 PF13419 Haloacid dehalogenase-like hydrolase LA08_06215 PF01593 Flavin containing amine oxidoreductase LA08_06220 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LA08_06225 PF01042 Endoribonuclease L-PSP LA08_06235 PF00127 Copper binding proteins, plastocyanin/azurin family LA08_06245 PF00202 Aminotransferase class-III LA08_06260 PF00665 Integrase core domain LA08_06260 PF13936 Helix-turn-helix domain LA08_06265 PF00665 Integrase core domain LA08_06265 PF13276 LA08_06265 LA08_06270 PF01527 Transposase LA08_06275 PF03377 Xanthomonas avirulence protein, Avr/PthA LA08_06290 PF03377 Xanthomonas avirulence protein, Avr/PthA LA08_06305 PF03377 Xanthomonas avirulence protein, Avr/PthA LA08_06325 PF01208 Uroporphyrinogen decarboxylase (URO-D) LA08_06335 PF01761 3-dehydroquinate synthase LA08_06340 PF01202 Shikimate kinase LA08_06345 PF01243 Pyridoxamine 5'-phosphate oxidase LA08_06345 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LA08_06350 PF09938 LA08_06350 LA08_06355 PF04012 LA08_06355 LA08_06360 PF07885 Ion channel LA08_06365 PF10679 LA08_06365 LA08_06370 PF03994 LA08_06370 LA08_06375 PF06693 LA08_06375 LA08_06380 PF03738 Glutathionylspermidine synthase preATP-grasp LA08_06395 PF00376 MerR family regulatory protein LA08_06395 PF09278 MerR, DNA binding LA08_06400 PF01433 Peptidase family M1 LA08_06405 PF00593 TonB dependent receptor LA08_06405 PF07715 TonB-dependent Receptor Plug Domain LA08_06415 PF07277 LA08_06415 LA08_06420 PF13621 Cupin-like domain LA08_06425 PF04820 Tryptophan halogenase LA08_06430 PF12706 Beta-lactamase superfamily domain LA08_06445 PF13365 Trypsin-like peptidase domain LA08_06450 PF13520 Amino acid permease LA08_06455 PF00196 Bacterial regulatory proteins, luxR family LA08_06455 PF03472 Autoinducer binding domain LA08_06460 PF00561 alpha/beta hydrolase fold LA08_06470 PF00324 Amino acid permease LA08_06480 PF01610 LA08_06480 LA08_06480 PF13542 LA08_06480 LA08_06490 PF01654 LA08_06490 LA08_06495 PF02322 LA08_06495 LA08_06500 PF00326 Prolyl oligopeptidase family LA08_06505 PF00571 CBS domain LA08_06505 PF01769 Divalent cation transporter LA08_06505 PF03448 MgtE intracellular N domain LA08_06515 PF00391 PEP-utilising enzyme, mobile domain LA08_06515 PF02896 PEP-utilising enzyme, TIM barrel domain LA08_06515 PF05524 PEP-utilising enzyme, N-terminal LA08_06520 PF00381 PTS HPr component phosphorylation site LA08_06525 PF03610 PTS system fructose IIA component LA08_06530 PF03668 LA08_06530 LA08_06535 PF02603 HPr Serine kinase N terminus LA08_06535 PF07475 HPr Serine kinase C-terminal domain LA08_06540 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LA08_06545 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LA08_06550 PF00309 LA08_06550 LA08_06550 PF04552 Sigma-54, DNA binding domain LA08_06550 PF04963 Sigma-54 factor, core binding domain LA08_06555 PF00005 ABC transporter LA08_06555 PF12399 Branched-chain amino acid ATP-binding cassette transporter LA08_06560 PF03968 OstA-like protein LA08_06565 PF06835 Lipopolysaccharide-assembly, LptC-related LA08_06570 PF08282 haloacid dehalogenase-like hydrolase LA08_06575 PF00571 CBS domain LA08_06575 PF01380 SIS domain LA08_06580 PF01722 BolA-like protein LA08_06590 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LA08_06600 PF11306 Protein of unknown function (DUF3108) LA08_06605 PF11306 Protein of unknown function (DUF3108) LA08_06610 PF00551 Formyl transferase LA08_06615 PF09997 LA08_06615 LA08_06625 PF00586 AIR synthase related protein, N-terminal domain LA08_06625 PF02769 AIR synthase related protein, C-terminal domain LA08_06630 PF09839 LA08_06630 LA08_06635 PF01594 LA08_06635 LA08_06640 PF00308 Bacterial dnaA protein LA08_06645 PF00483 Nucleotidyl transferase LA08_06650 PF01636 Phosphotransferase enzyme family LA08_06655 PF04226 LA08_06655 LA08_06665 PF01546 Peptidase family M20/M25/M40 LA08_06665 PF07687 Peptidase dimerisation domain LA08_06670 PF12836 Helix-hairpin-helix motif LA08_06680 PF05962 HutD LA08_06705 PF06964 Alpha-L-arabinofuranosidase C-terminus LA08_06710 PF01263 Aldose 1-epimerase LA08_06715 PF01578 LA08_06715 LA08_06730 PF00448 SRP54-type protein, GTPase domain LA08_06730 PF02881 SRP54-type protein, helical bundle domain LA08_06730 PF02978 Signal peptide binding domain LA08_06745 PF03060 Nitronate monooxygenase LA08_06750 PF01063 Aminotransferase class IV LA08_06755 PF00886 Ribosomal protein S16 LA08_06760 PF01782 RimM N-terminal domain LA08_06760 PF05239 PRC-barrel domain LA08_06765 PF01746 tRNA (Guanine-1)-methyltransferase LA08_06770 PF01245 Ribosomal protein L19 LA08_06780 PF01554 MatE LA08_06785 PF01479 S4 domain LA08_06800 PF01609 Transposase DDE domain LA08_06815 PF01541 GIY-YIG catalytic domain LA08_06820 PF00004 ATPase family associated with various cellular activities (AAA) LA08_06820 PF02861 Clp amino terminal domain LA08_06820 PF07724 AAA domain (Cdc48 subfamily) LA08_06820 PF10431 C-terminal, D2-small domain, of ClpB protein LA08_06860 PF00593 TonB dependent receptor LA08_06860 PF07715 TonB-dependent Receptor Plug Domain LA08_06885 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP LA08_06885 PF12557 Cob(I)alamin adenosyltransferase N terminal LA08_06895 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase LA08_06900 PF02277 Phosphoribosyltransferase LA08_06905 PF00300 Histidine phosphatase superfamily (branch 1) LA08_06910 PF02654 LA08_06910 LA08_06920 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LA08_06920 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LA08_06925 PF04183 IucA / IucC family LA08_06925 PF06276 Ferric iron reductase FhuF-like transporter LA08_06930 PF07690 Major Facilitator Superfamily LA08_06935 PF04183 IucA / IucC family LA08_06935 PF06276 Ferric iron reductase FhuF-like transporter LA08_06945 PF00593 TonB dependent receptor LA08_06945 PF07715 TonB-dependent Receptor Plug Domain LA08_06950 PF03328 HpcH/HpaI aldolase/citrate lyase family LA08_06960 PF00999 Sodium/hydrogen exchanger family LA08_06960 PF02254 TrkA-N domain LA08_06970 PF00593 TonB dependent receptor LA08_06970 PF07715 TonB-dependent Receptor Plug Domain LA08_06975 PF00593 TonB dependent receptor LA08_06975 PF07715 TonB-dependent Receptor Plug Domain LA08_06980 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LA08_06990 PF00593 TonB dependent receptor LA08_06990 PF07715 TonB-dependent Receptor Plug Domain LA08_06995 PF00005 ABC transporter LA08_06995 PF12848 ABC transporter LA08_06995 PF16326 LA08_06995 LA08_07010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA08_07010 PF03466 LysR substrate binding domain LA08_07020 PF07859 alpha/beta hydrolase fold LA08_07035 PF00486 Transcriptional regulatory protein, C terminal LA08_07040 PF12833 Helix-turn-helix domain LA08_07045 PF00183 Hsp90 protein LA08_07045 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA08_07075 PF00872 LA08_07075 LA08_07080 PF00120 Glutamine synthetase, catalytic domain LA08_07085 PF04204 Homoserine O-succinyltransferase LA08_07090 PF01810 LA08_07090 LA08_07095 PF07722 Peptidase C26 LA08_07100 PF00487 LA08_07100 LA08_07105 PF01053 Cys/Met metabolism PLP-dependent enzyme LA08_07110 PF00266 Aminotransferase class-V LA08_07120 PF12760 Transposase zinc-ribbon domain LA08_07120 PF12762 LA08_07120 LA08_07140 PF00355 Rieske [2Fe-2S] domain LA08_07145 PF13673 Acetyltransferase (GNAT) domain LA08_07150 PF00266 Aminotransferase class-V LA08_07155 PF01458 Uncharacterized protein family (UPF0051) LA08_07160 PF00005 ABC transporter LA08_07165 PF01458 Uncharacterized protein family (UPF0051) LA08_07170 PF02082 Transcriptional regulator LA08_07175 PF00856 SET domain LA08_07190 PF01965 DJ-1/PfpI family LA08_07195 PF07273 Protein of unknown function (DUF1439) LA08_07205 PF12977 Domain of Unknown Function with PDB structure (DUF3861) LA08_07210 PF01551 Peptidase family M23 LA08_07215 PF00216 Bacterial DNA-binding protein LA08_07230 PF03807 NADP oxidoreductase coenzyme F420-dependent LA08_07230 PF14748 Pyrroline-5-carboxylate reductase dimerisation LA08_07235 PF01168 Alanine racemase, N-terminal domain LA08_07240 PF00437 Type II/IV secretion system protein LA08_07245 PF00437 Type II/IV secretion system protein LA08_07250 PF02588 LA08_07250 LA08_07270 PF03352 Methyladenine glycosylase LA08_07280 PF02622 Uncharacterized ACR, COG1678 LA08_07285 PF03652 Uncharacterised protein family (UPF0081) LA08_07290 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LA08_07290 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LA08_07300 PF02566 OsmC-like protein LA08_07305 PF05433 LA08_07305 LA08_07310 PF02567 Phenazine biosynthesis-like protein LA08_07320 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LA08_07320 PF00696 Amino acid kinase family LA08_07320 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LA08_07335 PF08245 Mur ligase middle domain LA08_07345 PF01738 Dienelactone hydrolase family LA08_07350 PF00348 Polyprenyl synthetase LA08_07355 PF00436 Single-strand binding protein family LA08_07360 PF00990 GGDEF domain LA08_07360 PF02743 Cache domain LA08_07375 PF12760 Transposase zinc-ribbon domain LA08_07375 PF12762 LA08_07375 LA08_07385 PF13419 Haloacid dehalogenase-like hydrolase LA08_07395 PF04328 LA08_07395 LA08_07400 PF02554 LA08_07400 LA08_07400 PF13722 LA08_07400 LA08_07405 PF02678 Pirin LA08_07405 PF05726 Pirin C-terminal cupin domain LA08_07415 PF05954 Phage late control gene D protein (GPD) LA08_07415 PF10106 LA08_07415 LA08_07415 PF13296 LA08_07415 LA08_07420 PF13503 LA08_07420 LA08_07425 PF11745 LA08_07425 LA08_07430 PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) LA08_07435 PF05954 Phage late control gene D protein (GPD) LA08_07435 PF10106 LA08_07435 LA08_07435 PF13296 LA08_07435 LA08_07440 PF13503 LA08_07440 LA08_07450 PF11745 LA08_07450 LA08_07455 PF11745 LA08_07455 LA08_07460 PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) LA08_07465 PF10106 LA08_07465 LA08_07465 PF13296 LA08_07465 LA08_07470 PF13503 LA08_07470 LA08_07475 PF11745 LA08_07475 LA08_07485 PF11745 LA08_07485 LA08_07490 PF11745 LA08_07490 LA08_07495 PF11745 LA08_07495 LA08_07500 PF11745 LA08_07500 LA08_07505 PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) LA08_07520 PF02678 Pirin LA08_07520 PF05726 Pirin C-terminal cupin domain LA08_07530 PF04493 Endonuclease V LA08_07535 PF00300 Histidine phosphatase superfamily (branch 1) LA08_07550 PF01431 Peptidase family M13 LA08_07550 PF05649 Peptidase family M13 LA08_07560 PF00072 Response regulator receiver domain LA08_07560 PF01339 CheB methylesterase LA08_07565 PF01739 CheR methyltransferase, SAM binding domain LA08_07565 PF03705 CheR methyltransferase, all-alpha domain LA08_07570 PF00072 Response regulator receiver domain LA08_07570 PF00563 EAL domain LA08_07575 PF01584 CheW-like domain LA08_07580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA08_07585 PF01584 CheW-like domain LA08_07585 PF01627 Hpt domain LA08_07585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA08_07585 PF02895 Signal transducing histidine kinase, homodimeric domain LA08_07590 PF13466 STAS domain LA08_07595 PF00270 DEAD/DEAH box helicase LA08_07595 PF00271 Helicase conserved C-terminal domain LA08_07595 PF02559 CarD-like/TRCF domain LA08_07595 PF03461 TRCF domain LA08_07600 PF13302 Acetyltransferase (GNAT) domain LA08_07605 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ LA08_07625 PF00512 His Kinase A (phospho-acceptor) domain LA08_07625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA08_07640 PF01609 Transposase DDE domain LA08_07640 PF05598 LA08_07640 LA08_07650 PF06123 LA08_07650 LA08_07660 PF01609 Transposase DDE domain LA08_07660 PF05598 LA08_07660 LA08_07665 PF13358 DDE superfamily endonuclease LA08_07665 PF13551 Winged helix-turn helix LA08_07665 PF13592 LA08_07665 LA08_07670 PF00112 Papain family cysteine protease LA08_07675 PF06123 LA08_07675 LA08_07685 PF01609 Transposase DDE domain LA08_07685 PF05598 LA08_07685 LA08_07690 PF00112 Papain family cysteine protease LA08_07705 PF01609 Transposase DDE domain LA08_07705 PF05598 LA08_07705 LA08_07720 PF13936 Helix-turn-helix domain LA08_07725 PF00795 Carbon-nitrogen hydrolase LA08_07730 PF12275 LA08_07730 LA08_07735 PF00749 tRNA synthetases class I (E and Q), catalytic domain LA08_07740 PF01475 Ferric uptake regulator family LA08_07750 PF07883 Cupin domain LA08_07780 PF04306 LA08_07780 LA08_07785 PF00313 'Cold-shock' DNA-binding domain LA08_07790 PF05433 LA08_07790 LA08_07795 PF01322 Cytochrome C' LA08_07800 PF00899 ThiF family LA08_07805 PF01026 TatD related DNase LA08_07815 PF05433 LA08_07815 LA08_07820 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LA08_07820 PF02770 Acyl-CoA dehydrogenase, middle domain LA08_07820 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LA08_07830 PF00043 Glutathione S-transferase, C-terminal domain LA08_07830 PF02798 Glutathione S-transferase, N-terminal domain LA08_07835 PF00733 Asparagine synthase LA08_07835 PF13537 Glutamine amidotransferase domain LA08_07840 PF03358 NADPH-dependent FMN reductase LA08_07845 PF00772 DnaB-like helicase N terminal domain LA08_07845 PF03796 DnaB-like helicase C terminal domain LA08_07850 PF00875 DNA photolyase LA08_07850 PF03441 FAD binding domain of DNA photolyase LA08_07865 PF00691 OmpA family LA08_07865 PF13488 LA08_07865 LA08_07870 PF13561 Enoyl-(Acyl carrier protein) reductase LA08_07875 PF00665 Integrase core domain LA08_07875 PF13936 Helix-turn-helix domain LA08_07880 PF00593 TonB dependent receptor LA08_07880 PF07715 TonB-dependent Receptor Plug Domain LA08_07895 PF17067 LA08_07895 LA08_07900 PF00107 Zinc-binding dehydrogenase LA08_07900 PF08240 Alcohol dehydrogenase GroES-like domain LA08_07905 PF00654 Voltage gated chloride channel LA08_07915 PF01609 Transposase DDE domain LA08_07915 PF05598 LA08_07915 LA08_07920 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LA08_07920 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LA08_07925 PF00730 HhH-GPD superfamily base excision DNA repair protein LA08_07925 PF02805 Metal binding domain of Ada LA08_07925 PF06029 AlkA N-terminal domain LA08_07925 PF12833 Helix-turn-helix domain LA08_07940 PF13211 LA08_07940 LA08_07945 PF01124 MAPEG family LA08_07955 PF13275 S4 domain LA08_07970 PF00270 DEAD/DEAH box helicase LA08_07970 PF00271 Helicase conserved C-terminal domain LA08_07970 PF03880 DbpA RNA binding domain LA08_07975 PF00563 EAL domain LA08_07975 PF00990 GGDEF domain LA08_07980 PF00849 RNA pseudouridylate synthase LA08_07980 PF01479 S4 domain LA08_08005 PF03737 Demethylmenaquinone methyltransferase LA08_08010 PF00144 Beta-lactamase LA08_08010 PF11954 LA08_08010 LA08_08015 PF00999 Sodium/hydrogen exchanger family LA08_08020 PF00512 His Kinase A (phospho-acceptor) domain LA08_08020 PF00672 HAMP domain LA08_08020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA08_08025 PF00072 Response regulator receiver domain LA08_08025 PF00486 Transcriptional regulatory protein, C terminal LA08_08030 PF02321 Outer membrane efflux protein LA08_08035 PF06629 LA08_08035 LA08_08040 PF13437 HlyD family secretion protein LA08_08040 PF13533 Biotin-lipoyl like LA08_08045 PF00873 AcrB/AcrD/AcrF family LA08_08050 PF07929 Plasmid pRiA4b ORF-3-like protein LA08_08055 PF00005 ABC transporter LA08_08055 PF00664 ABC transporter transmembrane region LA08_08065 PF13546 LA08_08065 LA08_08075 PF05593 LA08_08075 LA08_08075 PF15523 LA08_08075 LA08_08080 PF01609 Transposase DDE domain LA08_08080 PF05598 LA08_08080 LA08_08095 PF01609 Transposase DDE domain LA08_08095 PF05598 LA08_08095 LA08_08115 PF13936 Helix-turn-helix domain LA08_08120 PF15523 LA08_08120 LA08_08130 PF13546 LA08_08130 LA08_08135 PF01121 Dephospho-CoA kinase LA08_08140 PF01478 Type IV leader peptidase family LA08_08140 PF06750 LA08_08140 LA08_08145 PF00482 Type II secretion system (T2SS), protein F LA08_08150 PF00114 Pilin (bacterial filament) LA08_08150 PF07963 Prokaryotic N-terminal methylation motif LA08_08155 PF00884 Sulfatase LA08_08165 PF01564 Spermine/spermidine synthase LA08_08170 PF00437 Type II/IV secretion system protein LA08_08170 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LA08_08185 PF00072 Response regulator receiver domain LA08_08185 PF00158 Sigma-54 interaction domain LA08_08185 PF02954 Bacterial regulatory protein, Fis family LA08_08190 PF00512 His Kinase A (phospho-acceptor) domain LA08_08190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA08_08195 PF00549 CoA-ligase LA08_08195 PF08442 ATP-grasp domain LA08_08200 PF00549 CoA-ligase LA08_08200 PF02629 CoA binding domain LA08_08215 PF00795 Carbon-nitrogen hydrolase LA08_08215 PF02540 NAD synthase LA08_08220 PF13525 Outer membrane lipoprotein LA08_08225 PF00849 RNA pseudouridylate synthase LA08_08230 PF02578 Multi-copper polyphenol oxidoreductase laccase LA08_08235 PF13761 LA08_08235 LA08_08240 PF04134 LA08_08240 LA08_08245 PF00982 Glycosyltransferase family 20 LA08_08250 PF00723 Glycosyl hydrolases family 15 LA08_08255 PF02358 Trehalose-phosphatase LA08_08265 PF00593 TonB dependent receptor LA08_08265 PF07715 TonB-dependent Receptor Plug Domain LA08_08270 PF12098 LA08_08270 LA08_08275 PF14486 Domain of unknown function (DUF4432) LA08_08290 PF03372 Endonuclease/Exonuclease/phosphatase family LA08_08295 PF04376 LA08_08295 LA08_08295 PF04377 LA08_08295 LA08_08300 PF13202 EF hand LA08_08315 PF04542 Sigma-70 region 2 LA08_08325 PF13622 Thioesterase-like superfamily LA08_08330 PF00378 Enoyl-CoA hydratase/isomerase family LA08_08335 PF04314 Protein of unknown function (DUF461) LA08_08340 PF13279 Thioesterase-like superfamily LA08_08350 PF00829 Ribosomal prokaryotic L21 protein LA08_08355 PF01016 Ribosomal L27 protein LA08_08360 PF01018 GTP1/OBG LA08_08360 PF01926 50S ribosome-binding GTPase LA08_08365 PF01649 Ribosomal protein S20 LA08_08370 PF03023 LA08_08370 LA08_08375 PF01687 Riboflavin kinase LA08_08375 PF06574 FAD synthetase LA08_08380 PF00133 tRNA synthetases class I (I, L, M and V) LA08_08380 PF06827 Zinc finger found in FPG and IleRS LA08_08380 PF08264 Anticodon-binding domain of tRNA LA08_08385 PF01252 LA08_08385 LA08_08390 PF02401 LytB protein LA08_08400 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LA08_08400 PF06481 COX Aromatic Rich Motif LA08_08405 PF00115 Cytochrome C and Quinol oxidase polypeptide I LA08_08410 PF00510 Cytochrome c oxidase subunit III LA08_08415 PF03626 LA08_08415 LA08_08420 PF05299 M61 glycyl aminopeptidase LA08_08420 PF07720 Tetratricopeptide repeat LA08_08425 PF05954 Phage late control gene D protein (GPD) LA08_08435 PF05593 LA08_08435 LA08_08435 PF14440 LA08_08435 LA08_08440 PF14435 LA08_08440 LA08_08465 PF00488 MutS domain V LA08_08465 PF01624 MutS domain I LA08_08465 PF05188 MutS domain II LA08_08465 PF05190 MutS family domain IV LA08_08465 PF05192 MutS domain III LA08_08490 PF13481 AAA domain LA08_08490 PF13541 Subunit ChlI of Mg-chelatase LA08_08505 PF13231 LA08_08505 LA08_08515 PF07690 Major Facilitator Superfamily LA08_08520 PF09723 LA08_08520 LA08_08525 PF11218 LA08_08525 LA08_08530 PF00152 tRNA synthetases class II (D, K and N) LA08_08530 PF01336 OB-fold nucleic acid binding domain LA08_08530 PF02938 GAD domain LA08_08535 PF00583 Acetyltransferase (GNAT) family LA08_08540 PF06259 Alpha/beta hydrolase LA08_08545 PF01709 Transcriptional regulator LA08_08550 PF02075 Crossover junction endodeoxyribonuclease RuvC LA08_08555 PF01330 RuvA N terminal domain LA08_08555 PF07499 RuvA, C-terminal domain LA08_08555 PF14520 Helix-hairpin-helix domain LA08_08560 PF02705 LA08_08560 LA08_08565 PF05491 Holliday junction DNA helicase ruvB C-terminus LA08_08565 PF05496 Holliday junction DNA helicase ruvB N-terminus LA08_08570 PF03061 Thioesterase superfamily LA08_08575 PF01618 LA08_08575 LA08_08580 PF02472 Biopolymer transport protein ExbD/TolR LA08_08585 PF13103 TonB C terminal LA08_08590 PF04052 TolB amino-terminal domain LA08_08590 PF07676 WD40-like Beta Propeller Repeat LA08_08595 PF00691 OmpA family LA08_08600 PF13525 Outer membrane lipoprotein LA08_08600 PF16331 LA08_08600 LA08_08605 PF04055 Radical SAM superfamily LA08_08605 PF13394 4Fe-4S single cluster domain LA08_08615 PF01479 S4 domain LA08_08635 PF01810 LA08_08635 LA08_08655 PF01610 LA08_08655 LA08_08655 PF13542 LA08_08655 LA08_08665 PF01609 Transposase DDE domain LA08_08665 PF05598 LA08_08665 LA08_08675 PF06508 Queuosine biosynthesis protein QueC LA08_08690 PF00072 Response regulator receiver domain LA08_08700 PF00270 DEAD/DEAH box helicase LA08_08700 PF00271 Helicase conserved C-terminal domain LA08_08700 PF00570 HRDC domain LA08_08700 PF09382 RQC domain LA08_08700 PF16124 LA08_08700 LA08_08710 PF00210 Ferritin-like domain LA08_08715 PF00270 DEAD/DEAH box helicase LA08_08715 PF00271 Helicase conserved C-terminal domain LA08_08715 PF04408 Helicase associated domain (HA2) LA08_08715 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LA08_08715 PF11898 LA08_08715 LA08_08720 PF00593 TonB dependent receptor LA08_08720 PF07715 TonB-dependent Receptor Plug Domain LA08_08730 PF10142 PhoPQ-activated pathogenicity-related protein LA08_08745 PF04055 Radical SAM superfamily LA08_08745 PF13186 Iron-sulfur cluster-binding domain LA08_08745 PF13353 4Fe-4S single cluster domain LA08_08750 PF05402 Coenzyme PQQ synthesis protein D (PqqD) LA08_08755 PF03070 TENA/THI-4/PQQC family LA08_08760 PF12706 Beta-lactamase superfamily domain LA08_08765 PF08042 LA08_08765 LA08_08770 PF02824 TGS domain LA08_08770 PF04607 Region found in RelA / SpoT proteins LA08_08770 PF13291 ACT domain LA08_08770 PF13328 HD domain LA08_08780 PF00535 Glycosyl transferase family 2 LA08_08780 PF13692 Glycosyl transferases group 1 LA08_08785 PF00905 Penicillin binding protein transpeptidase domain LA08_08785 PF00912 Transglycosylase LA08_08785 PF14814 Bifunctional transglycosylase second domain LA08_08795 PF13307 Helicase C-terminal domain LA08_08800 PF00814 Glycoprotease family LA08_08805 PF03747 ADP-ribosylglycohydrolase LA08_08810 PF03544 Gram-negative bacterial TonB protein C-terminal LA08_08815 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LA08_08815 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LA08_08820 PF00072 Response regulator receiver domain LA08_08825 PF00072 Response regulator receiver domain LA08_08830 PF01584 CheW-like domain LA08_08835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA08_08840 PF00072 Response regulator receiver domain LA08_08840 PF01584 CheW-like domain LA08_08840 PF01627 Hpt domain LA08_08840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA08_08840 PF02895 Signal transducing histidine kinase, homodimeric domain LA08_08845 PF01339 CheB methylesterase LA08_08850 PF01584 CheW-like domain LA08_08855 PF13302 Acetyltransferase (GNAT) domain LA08_08860 PF13358 DDE superfamily endonuclease LA08_08860 PF13518 Helix-turn-helix domain LA08_08885 PF01112 Asparaginase LA08_08890 PF03932 CutC family LA08_08895 PF00560 Leucine Rich Repeat LA08_08900 PF13088 BNR repeat-like domain LA08_08915 PF01610 LA08_08915 LA08_08915 PF13542 LA08_08915 LA08_08935 PF01301 Glycosyl hydrolases family 35 LA08_08945 PF07971 Glycosyl hydrolase family 92 LA08_08950 PF06824 Protein of unknown function (DUF1237) LA08_08960 PF13533 Biotin-lipoyl like LA08_08980 PF13437 HlyD family secretion protein LA08_09010 PF00005 ABC transporter LA08_09010 PF00664 ABC transporter transmembrane region LA08_09010 PF03412 Peptidase C39 family LA08_09015 PF00933 Glycosyl hydrolase family 3 N terminal domain LA08_09015 PF01915 Glycosyl hydrolase family 3 C-terminal domain LA08_09015 PF07691 PA14 domain LA08_09015 PF14310 Fibronectin type III-like domain LA08_09020 PF00703 Glycosyl hydrolases family 2 LA08_09020 PF02836 Glycosyl hydrolases family 2, TIM barrel domain LA08_09035 PF00704 Glycosyl hydrolases family 18 LA08_09040 PF01120 Alpha-L-fucosidase LA08_09040 PF16757 LA08_09040 LA08_09045 PF00593 TonB dependent receptor LA08_09045 PF07715 TonB-dependent Receptor Plug Domain LA08_09050 PF02685 Glucokinase LA08_09055 PF04452 RNA methyltransferase LA08_09060 PF00202 Aminotransferase class-III LA08_09065 PF00293 NUDIX domain LA08_09070 PF00459 Inositol monophosphatase family LA08_09075 PF03819 MazG nucleotide pyrophosphohydrolase domain LA08_09080 PF02694 LA08_09080 LA08_09090 PF01145 SPFH domain / Band 7 family LA08_09090 PF16200 LA08_09090 LA08_09095 PF01957 NfeD-like C-terminal, partner-binding LA08_09100 PF01571 Aminomethyltransferase folate-binding domain LA08_09100 PF08669 Glycine cleavage T-protein C-terminal barrel domain LA08_09105 PF01597 Glycine cleavage H-protein LA08_09125 PF00144 Beta-lactamase LA08_09135 PF06993 LA08_09135 LA08_09140 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LA08_09140 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LA08_09140 PF09317 LA08_09140 LA08_09145 PF12146 Putative lysophospholipase LA08_09150 PF00440 Bacterial regulatory proteins, tetR family LA08_09155 PF00593 TonB dependent receptor LA08_09155 PF07715 TonB-dependent Receptor Plug Domain LA08_09165 PF01430 Hsp33 protein LA08_09170 PF00912 Transglycosylase LA08_09175 PF00535 Glycosyl transferase family 2 LA08_09185 PF05170 LA08_09185 LA08_09195 PF03006 LA08_09195 LA08_09200 PF00009 Elongation factor Tu GTP binding domain LA08_09200 PF16658 LA08_09200 LA08_09205 PF01551 Peptidase family M23 LA08_09210 PF00561 alpha/beta hydrolase fold LA08_09215 PF01053 Cys/Met metabolism PLP-dependent enzyme LA08_09225 PF03313 LA08_09225 LA08_09225 PF03315 Serine dehydratase beta chain LA08_09230 PF05768 Glutaredoxin-like domain (DUF836) LA08_09235 PF05901 LA08_09235 LA08_09240 PF04264 YceI-like domain LA08_09245 PF01292 Prokaryotic cytochrome b561 LA08_09250 PF04264 YceI-like domain LA08_09255 PF00072 Response regulator receiver domain LA08_09255 PF00512 His Kinase A (phospho-acceptor) domain LA08_09255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA08_09255 PF07494 Two component regulator propeller LA08_09255 PF07495 Y_Y_Y domain LA08_09260 PF00072 Response regulator receiver domain LA08_09260 PF00512 His Kinase A (phospho-acceptor) domain LA08_09260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA08_09260 PF07494 Two component regulator propeller LA08_09260 PF07495 Y_Y_Y domain LA08_09265 PF00072 Response regulator receiver domain LA08_09265 PF00512 His Kinase A (phospho-acceptor) domain LA08_09265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA08_09265 PF07494 Two component regulator propeller LA08_09265 PF07495 Y_Y_Y domain LA08_09285 PF00754 F5/8 type C domain LA08_09285 PF01120 Alpha-L-fucosidase LA08_09300 PF02836 Glycosyl hydrolases family 2, TIM barrel domain LA08_09300 PF07745 Glycosyl hydrolase family 53 LA08_09310 PF06114 Domain of unknown function (DUF955) LA08_09310 PF09856 LA08_09310 LA08_09310 PF13560 Helix-turn-helix domain LA08_09315 PF00171 Aldehyde dehydrogenase family LA08_09320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LA08_09320 PF02770 Acyl-CoA dehydrogenase, middle domain LA08_09320 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LA08_09325 PF00378 Enoyl-CoA hydratase/isomerase family LA08_09330 PF16113 LA08_09330 LA08_09335 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LA08_09335 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LA08_09340 PF01545 Cation efflux family LA08_09345 PF00378 Enoyl-CoA hydratase/isomerase family LA08_09345 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LA08_09345 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LA08_09350 PF04542 Sigma-70 region 2 LA08_09350 PF08281 Sigma-70, region 4 LA08_09355 PF03872 Anti sigma-E protein RseA, N-terminal domain LA08_09360 PF13180 PDZ domain LA08_09360 PF13365 Trypsin-like peptidase domain LA08_09365 PF00009 Elongation factor Tu GTP binding domain LA08_09365 PF00679 Elongation factor G C-terminus LA08_09365 PF03144 Elongation factor Tu domain 2 LA08_09365 PF06421 GTP-binding protein LepA C-terminus LA08_09370 PF00717 Peptidase S24-like LA08_09375 PF16137 LA08_09375 LA08_09380 PF00035 Double-stranded RNA binding motif LA08_09380 PF14622 Ribonuclease-III-like LA08_09385 PF01926 50S ribosome-binding GTPase LA08_09385 PF07650 KH domain LA08_09390 PF02565 Recombination protein O C terminal LA08_09390 PF11967 Recombination protein O N terminal LA08_09395 PF00072 Response regulator receiver domain LA08_09395 PF01627 Hpt domain LA08_09400 PF05958 tRNA (Uracil-5-)-methyltransferase LA08_09405 PF01928 CYTH domain LA08_09415 PF01609 Transposase DDE domain LA08_09415 PF05598 LA08_09415 LA08_09420 PF01323 DSBA-like thioredoxin domain LA08_09425 PF13450 NAD(P)-binding Rossmann-like domain LA08_09430 PF04244 Deoxyribodipyrimidine photo-lyase-related protein LA08_09435 PF00933 Glycosyl hydrolase family 3 N terminal domain LA08_09440 PF00156 Phosphoribosyl transferase domain LA08_09445 PF01048 Phosphorylase superfamily LA08_09450 PF00313 'Cold-shock' DNA-binding domain LA08_09465 PF00149 Calcineurin-like phosphoesterase LA08_09470 PF00270 DEAD/DEAH box helicase LA08_09470 PF00271 Helicase conserved C-terminal domain LA08_09470 PF08494 LA08_09470 LA08_09475 PF01068 ATP dependent DNA ligase domain LA08_09475 PF04675 DNA ligase N terminus LA08_09475 PF04679 ATP dependent DNA ligase C terminal region LA08_09495 PF04519 LA08_09495 LA08_09500 PF00990 GGDEF domain LA08_09500 PF05227 CHASE3 domain LA08_09515 PF00108 Thiolase, N-terminal domain LA08_09515 PF02803 Thiolase, C-terminal domain LA08_09520 PF00082 Subtilase family LA08_09520 PF03797 Autotransporter beta-domain LA08_09520 PF12951 LA08_09520 LA08_09525 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LA08_09525 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LA08_09540 PF01863 Protein of unknown function DUF45 LA08_09545 PF07043 LA08_09545 LA08_09550 PF10982 Protein of unknown function (DUF2789) LA08_09555 PF01258 Prokaryotic dksA/traR C4-type zinc finger LA08_09560 PF00924 Mechanosensitive ion channel LA08_09575 PF13546 LA08_09575 LA08_09595 PF00012 Hsp70 protein LA08_09600 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LA08_09610 PF01545 Cation efflux family LA08_09615 PF03831 PhnA protein LA08_09615 PF08274 PhnA Zinc-Ribbon LA08_09630 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LA08_09635 PF07690 Major Facilitator Superfamily LA08_09655 PF09537 Domain of unknown function (DUF2383) LA08_09660 PF13563 2'-5' RNA ligase superfamily LA08_09670 PF09791 LA08_09670 LA08_09675 PF06057 Bacterial virulence protein (VirJ) LA08_09690 PF03706 LA08_09690 LA08_09690 PF09924 Uncharacterized conserved protein (DUF2156) LA08_09700 PF01042 Endoribonuclease L-PSP LA08_09705 PF02353 Mycolic acid cyclopropane synthetase LA08_09710 PF06966 LA08_09710 LA08_09715 PF11086 LA08_09715 LA08_09720 PF02353 Mycolic acid cyclopropane synthetase LA08_09725 PF07103 LA08_09725 LA08_09730 PF01593 Flavin containing amine oxidoreductase LA08_09735 PF00487 LA08_09735 LA08_09740 PF10099 LA08_09740 LA08_09745 PF04542 Sigma-70 region 2 LA08_09745 PF08281 Sigma-70, region 4 LA08_09765 PF04060 Putative Fe-S cluster LA08_09765 PF14697 4Fe-4S dicluster domain LA08_09770 PF12710 haloacid dehalogenase-like hydrolase LA08_09775 PF01588 Putative tRNA binding domain LA08_09775 PF09334 tRNA synthetases class I (M) LA08_09780 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) LA08_09790 PF13358 DDE superfamily endonuclease LA08_09790 PF13551 Winged helix-turn helix LA08_09790 PF13592 LA08_09790 LA08_09795 PF00324 Amino acid permease LA08_09800 PF02574 Homocysteine S-methyltransferase LA08_09805 PF05960 Bacterial protein of unknown function (DUF885) LA08_09815 PF02592 LA08_09815 LA08_09820 PF04367 LA08_09820 LA08_09830 PF01609 Transposase DDE domain LA08_09830 PF05598 LA08_09830 LA08_09835 PF08845 LA08_09835 LA08_09840 PF05598 LA08_09840 LA08_09850 PF01583 Adenylylsulphate kinase LA08_09885 PF06850 LA08_09885 LA08_09895 PF03653 LA08_09895 LA08_09910 PF12040 LA08_09910 LA08_09910 PF12679 LA08_09910 LA08_09915 PF12040 LA08_09915 LA08_09920 PF00005 ABC transporter LA08_09925 PF00593 TonB dependent receptor LA08_09925 PF07715 TonB-dependent Receptor Plug Domain LA08_09935 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LA08_09940 PF01336 OB-fold nucleic acid binding domain LA08_09940 PF02811 PHP domain LA08_09940 PF07733 Bacterial DNA polymerase III alpha subunit LA08_09940 PF14579 Helix-hairpin-helix motif LA08_09945 PF01351 Ribonuclease HII LA08_09950 PF02684 LA08_09950 LA08_09955 PF00132 Bacterial transferase hexapeptide (six repeats) LA08_09955 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LA08_09960 PF07977 FabA-like domain LA08_09965 PF00132 Bacterial transferase hexapeptide (six repeats) LA08_09965 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LA08_09975 PF01103 Surface antigen LA08_09975 PF07244 Surface antigen variable number repeat LA08_09980 PF02163 Peptidase family M50 LA08_09985 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LA08_09985 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal LA08_09985 PF13288 DXP reductoisomerase C-terminal domain LA08_09990 PF01148 Cytidylyltransferase family LA08_09995 PF01255 Putative undecaprenyl diphosphate synthase LA08_10000 PF01765 Ribosome recycling factor LA08_10005 PF00696 Amino acid kinase family LA08_10010 PF08668 HDOD domain LA08_10015 PF00889 Elongation factor TS LA08_10020 PF00318 Ribosomal protein S2 LA08_10025 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LA08_10035 PF05229 LA08_10035 LA08_10040 PF00577 Outer membrane usher protein LA08_10040 PF13953 PapC C-terminal domain LA08_10045 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LA08_10050 PF05229 LA08_10050 LA08_10055 PF00557 Metallopeptidase family M24 LA08_10060 PF01909 Nucleotidyltransferase domain LA08_10060 PF01966 HD domain LA08_10060 PF08335 GlnD PII-uridylyltransferase LA08_10065 PF00132 Bacterial transferase hexapeptide (six repeats) LA08_10065 PF14602 Hexapeptide repeat of succinyl-transferase LA08_10065 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal LA08_10075 PF03960 ArsC family LA08_10080 PF13508 Acetyltransferase (GNAT) domain LA08_10085 PF01546 Peptidase family M20/M25/M40 LA08_10085 PF07687 Peptidase dimerisation domain LA08_10090 PF00733 Asparagine synthase LA08_10090 PF13537 Glutamine amidotransferase domain LA08_10095 PF13229 Right handed beta helix region LA08_10105 PF00593 TonB dependent receptor LA08_10105 PF07715 TonB-dependent Receptor Plug Domain LA08_10110 PF01804 Penicillin amidase LA08_10115 PF00210 Ferritin-like domain LA08_10125 PF00521 DNA gyrase/topoisomerase IV, subunit A LA08_10125 PF03989 DNA gyrase C-terminal domain, beta-propeller LA08_10135 PF01047 MarR family LA08_10140 PF02321 Outer membrane efflux protein LA08_10145 PF00529 HlyD family secretion protein LA08_10145 PF16576 LA08_10145 LA08_10150 PF07690 Major Facilitator Superfamily LA08_10155 PF00144 Beta-lactamase LA08_10190 PF04101 Glycosyltransferase family 28 C-terminal domain LA08_10195 PF02779 Transketolase, pyrimidine binding domain LA08_10195 PF02780 Transketolase, C-terminal domain LA08_10195 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LA08_10200 PF14279 LA08_10200 LA08_10205 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LA08_10205 PF02770 Acyl-CoA dehydrogenase, middle domain LA08_10205 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LA08_10205 PF12418 LA08_10205 LA08_10205 PF12806 LA08_10205 LA08_10210 PF03168 Late embryogenesis abundant protein LA08_10220 PF01668 SmpB protein LA08_10225 PF03364 Polyketide cyclase / dehydrase and lipid transport LA08_10230 PF03658 RnfH family Ubiquitin LA08_10240 PF04355 SmpA / OmlA family LA08_10245 PF01475 Ferric uptake regulator family LA08_10250 PF02463 RecF/RecN/SMC N terminal domain LA08_10255 PF01628 HrcA protein C terminal domain LA08_10255 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding LA08_10260 PF01025 GrpE LA08_10265 PF00012 Hsp70 protein LA08_10270 PF00226 DnaJ domain LA08_10270 PF00684 DnaJ central domain LA08_10270 PF01556 DnaJ C terminal domain LA08_10280 PF08543 Phosphomethylpyrimidine kinase LA08_10285 PF01842 ACT domain LA08_10285 PF02153 Prephenate dehydrogenase LA08_10295 PF13546 LA08_10295 LA08_10300 PF02321 Outer membrane efflux protein LA08_10305 PF03466 LysR substrate binding domain LA08_10320 PF00005 ABC transporter LA08_10320 PF00664 ABC transporter transmembrane region LA08_10325 PF01205 Uncharacterized protein family UPF0029 LA08_10325 PF09186 Domain of unknown function (DUF1949) LA08_10330 PF03641 Possible lysine decarboxylase LA08_10335 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LA08_10335 PF07992 Pyridine nucleotide-disulphide oxidoreductase LA08_10340 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LA08_10340 PF00364 Biotin-requiring enzyme LA08_10340 PF02817 e3 binding domain LA08_10345 PF00676 Dehydrogenase E1 component LA08_10345 PF02779 Transketolase, pyrimidine binding domain LA08_10345 PF16078 LA08_10345 LA08_10345 PF16870 LA08_10345 LA08_10350 PF13673 Acetyltransferase (GNAT) domain LA08_10355 PF08007 Cupin superfamily protein LA08_10360 PF13180 PDZ domain LA08_10370 PF11259 LA08_10370 LA08_10375 PF00206 Lyase LA08_10375 PF08328 Adenylosuccinate lyase C-terminal LA08_10405 PF00206 Lyase LA08_10405 PF10415 Fumarase C C-terminus LA08_10425 PF13349 LA08_10425 LA08_10435 PF00005 ABC transporter LA08_10440 PF00392 Bacterial regulatory proteins, gntR family LA08_10450 PF00255 Glutathione peroxidase LA08_10455 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LA08_10455 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LA08_10460 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LA08_10460 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LA08_10460 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LA08_10465 PF04102 SlyX LA08_10470 PF09831 LA08_10470 LA08_10475 PF13557 LA08_10475 LA08_10480 PF00356 Bacterial regulatory proteins, lacI family LA08_10480 PF13377 Periplasmic binding protein-like domain LA08_10485 PF07690 Major Facilitator Superfamily LA08_10490 PF00294 pfkB family carbohydrate kinase LA08_10495 PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) LA08_10500 PF00809 Pterin binding enzyme LA08_10500 PF02310 B12 binding domain LA08_10500 PF02607 B12 binding domain LA08_10500 PF02965 Vitamin B12 dependent methionine synthase, activation domain LA08_10505 PF02574 Homocysteine S-methyltransferase LA08_10510 PF01022 Bacterial regulatory protein, arsR family LA08_10510 PF08241 Methyltransferase domain LA08_10515 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LA08_10515 PF02770 Acyl-CoA dehydrogenase, middle domain LA08_10515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LA08_10535 PF13472 GDSL-like Lipase/Acylhydrolase family LA08_10545 PF00575 S1 RNA binding domain LA08_10545 PF00773 RNB domain LA08_10545 PF08206 Ribonuclease B OB domain LA08_10565 PF00588 SpoU rRNA Methylase family LA08_10565 PF08032 RNA 2'-O ribose methyltransferase substrate binding LA08_10580 PF01609 Transposase DDE domain LA08_10580 PF05598 LA08_10580 LA08_10590 PF12760 Transposase zinc-ribbon domain LA08_10590 PF12762 LA08_10590 LA08_10605 PF00872 LA08_10605 LA08_10610 PF05598 LA08_10610 LA08_10615 PF00313 'Cold-shock' DNA-binding domain LA08_10620 PF00561 alpha/beta hydrolase fold LA08_10630 PF01609 Transposase DDE domain LA08_10630 PF05598 LA08_10630 LA08_10635 PF01609 Transposase DDE domain LA08_10635 PF05598 LA08_10635 LA08_10655 PF03544 Gram-negative bacterial TonB protein C-terminal LA08_10660 PF03544 Gram-negative bacterial TonB protein C-terminal LA08_10665 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LA08_10665 PF02403 Seryl-tRNA synthetase N-terminal domain LA08_10680 PF13546 LA08_10680 LA08_10685 PF01609 Transposase DDE domain LA08_10685 PF05598 LA08_10685 LA08_10690 PF02525 Flavodoxin-like fold LA08_10695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA08_10695 PF03466 LysR substrate binding domain LA08_10715 PF03377 Xanthomonas avirulence protein, Avr/PthA LA08_10735 PF03377 Xanthomonas avirulence protein, Avr/PthA LA08_10755 PF03377 Xanthomonas avirulence protein, Avr/PthA LA08_10765 PF13546 LA08_10765 LA08_10775 PF01650 Peptidase C13 family LA08_10790 PF03079 ARD/ARD' family LA08_10795 PF00596 Class II Aldolase and Adducin N-terminal domain LA08_10800 PF13520 Amino acid permease LA08_10805 PF13520 Amino acid permease LA08_10810 PF00293 NUDIX domain LA08_10815 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LA08_10815 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LA08_10820 PF01565 FAD binding domain LA08_10820 PF02913 FAD linked oxidases, C-terminal domain LA08_10825 PF09498 LA08_10825 LA08_10830 PF13387 LA08_10830 LA08_10840 PF13432 Tetratricopeptide repeat LA08_10845 PF03918 Cytochrome C biogenesis protein LA08_10850 PF08534 Redoxin LA08_10855 PF01578 LA08_10855 LA08_10855 PF16327 LA08_10855 LA08_10860 PF03100 CcmE LA08_10865 PF04995 LA08_10865 LA08_10870 PF01578 LA08_10870 LA08_10875 PF03379 LA08_10875 LA08_10880 PF00005 ABC transporter LA08_10885 PF00155 Aminotransferase class I and II LA08_10890 PF00795 Carbon-nitrogen hydrolase LA08_10895 PF12760 Transposase zinc-ribbon domain LA08_10895 PF12762 LA08_10895 LA08_10900 PF05096 Glutamine cyclotransferase LA08_10910 PF00849 RNA pseudouridylate synthase LA08_10910 PF01479 S4 domain LA08_10915 PF04079 Putative transcriptional regulators (Ypuh-like) LA08_10920 PF02616 ScpA/B protein LA08_10925 PF03795 YCII-related domain LA08_10930 PF01722 BolA-like protein LA08_10935 PF00356 Bacterial regulatory proteins, lacI family LA08_10935 PF13377 Periplasmic binding protein-like domain LA08_10940 PF00593 TonB dependent receptor LA08_10940 PF07715 TonB-dependent Receptor Plug Domain LA08_10945 PF10091 Putative glucoamylase LA08_10950 PF13416 Bacterial extracellular solute-binding protein LA08_10955 PF00528 Binding-protein-dependent transport system inner membrane component LA08_10960 PF00528 Binding-protein-dependent transport system inner membrane component LA08_10965 PF00754 F5/8 type C domain LA08_10965 PF06202 Amylo-alpha-1,6-glucosidase LA08_10975 PF01963 LA08_10975 LA08_10980 PF13420 Acetyltransferase (GNAT) domain LA08_10985 PF00795 Carbon-nitrogen hydrolase LA08_10995 PF04371 Porphyromonas-type peptidyl-arginine deiminase LA08_11005 PF00444 Ribosomal protein L36 LA08_11010 PF02224 Cytidylate kinase LA08_11015 PF00575 S1 RNA binding domain LA08_11020 PF00216 Bacterial DNA-binding protein LA08_11025 PF06305 LA08_11025 LA08_11030 PF13432 Tetratricopeptide repeat LA08_11035 PF00953 Glycosyl transferase family 4 LA08_11040 PF02719 Polysaccharide biosynthesis protein LA08_11040 PF13727 CoA-binding domain LA08_11045 PF00483 Nucleotidyl transferase LA08_11060 PF06844 Protein of unknown function (DUF1244) LA08_11065 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LA08_11065 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LA08_11070 PF00478 IMP dehydrogenase / GMP reductase domain LA08_11070 PF00571 CBS domain LA08_11075 PF00117 Glutamine amidotransferase class-I LA08_11075 PF00958 GMP synthase C terminal domain LA08_11075 PF02540 NAD synthase LA08_11080 PF10070 LA08_11080 LA08_11085 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains LA08_11085 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LA08_11090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA08_11090 PF03466 LysR substrate binding domain LA08_11115 PF03601 LA08_11115 LA08_11120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA08_11120 PF03466 LysR substrate binding domain LA08_11135 PF00072 Response regulator receiver domain LA08_11135 PF17201 LA08_11135 LA08_11145 PF01566 LA08_11145 LA08_11150 PF01325 Iron dependent repressor, N-terminal DNA binding domain LA08_11150 PF02742 Iron dependent repressor, metal binding and dimerisation domain LA08_11155 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LA08_11160 PF00929 Exonuclease LA08_11165 PF00924 Mechanosensitive ion channel LA08_11170 PF00391 PEP-utilising enzyme, mobile domain LA08_11170 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LA08_11170 PF02896 PEP-utilising enzyme, TIM barrel domain LA08_11175 PF03618 LA08_11175 LA08_11180 PF06853 LA08_11180 LA08_11185 PF00293 NUDIX domain LA08_11205 PF01609 Transposase DDE domain LA08_11205 PF05598 LA08_11205 LA08_11210 PF13546 LA08_11210 LA08_11225 PF13561 Enoyl-(Acyl carrier protein) reductase LA08_11230 PF01066 CDP-alcohol phosphatidyltransferase LA08_11235 PF09712 LA08_11235 LA08_11240 PF00561 alpha/beta hydrolase fold LA08_11245 PF04024 LA08_11245 LA08_11255 PF01266 FAD dependent oxidoreductase LA08_11265 PF00575 S1 RNA binding domain LA08_11265 PF09371 Tex-like protein N-terminal domain LA08_11265 PF12836 Helix-hairpin-helix motif LA08_11265 PF16921 LA08_11265 LA08_11280 PF00072 Response regulator receiver domain LA08_11280 PF02954 Bacterial regulatory protein, Fis family LA08_11285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA08_11290 PF04551 GcpE protein LA08_11295 PF01569 PAP2 superfamily LA08_11305 PF07690 Major Facilitator Superfamily LA08_11310 PF00665 Integrase core domain LA08_11310 PF13936 Helix-turn-helix domain LA08_11330 PF00892 EamA-like transporter family LA08_11335 PF01565 FAD binding domain LA08_11335 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LA08_11340 PF01180 Dihydroorotate dehydrogenase LA08_11345 PF08241 Methyltransferase domain LA08_11350 PF13828 LA08_11350 LA08_11355 PF00171 Aldehyde dehydrogenase family LA08_11370 PF00696 Amino acid kinase family LA08_11370 PF00742 Homoserine dehydrogenase LA08_11370 PF03447 Homoserine dehydrogenase, NAD binding domain LA08_11370 PF13840 ACT domain LA08_11375 PF00288 GHMP kinases N terminal domain LA08_11375 PF08544 GHMP kinases C terminal LA08_11385 PF07110 EthD domain LA08_11390 PF00291 Pyridoxal-phosphate dependent enzyme LA08_11390 PF14821 Threonine synthase N terminus LA08_11395 PF13645 LA08_11395 LA08_11405 PF03129 Anticodon binding domain LA08_11405 PF13393 Histidyl-tRNA synthetase LA08_11420 PF01371 Trp repressor protein LA08_11425 PF01634 ATP phosphoribosyltransferase LA08_11425 PF08029 HisG, C-terminal domain LA08_11430 PF00815 Histidinol dehydrogenase LA08_11435 PF00155 Aminotransferase class I and II LA08_11440 PF00475 Imidazoleglycerol-phosphate dehydratase LA08_11440 PF13242 HAD-hyrolase-like LA08_11445 PF00117 Glutamine amidotransferase class-I LA08_11450 PF00977 Histidine biosynthesis protein LA08_11455 PF00977 Histidine biosynthesis protein LA08_11460 PF01502 Phosphoribosyl-AMP cyclohydrolase LA08_11460 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LA08_11470 PF03377 Xanthomonas avirulence protein, Avr/PthA LA08_11485 PF03377 Xanthomonas avirulence protein, Avr/PthA LA08_11495 PF16380 LA08_11495 LA08_11500 PF02810 SEC-C motif LA08_11510 PF05857 LA08_11510 LA08_11515 PF05707 Zonular occludens toxin (Zot) LA08_11520 PF10734 LA08_11520 LA08_11530 PF10389 Bacteriophage coat protein B LA08_11540 PF02303 Helix-destabilising protein LA08_11560 PF12472 LA08_11560 LA08_11585 PF12760 Transposase zinc-ribbon domain LA08_11585 PF12762 LA08_11585 LA08_11620 PF03377 Xanthomonas avirulence protein, Avr/PthA LA08_11635 PF03377 Xanthomonas avirulence protein, Avr/PthA LA08_11655 PF03377 Xanthomonas avirulence protein, Avr/PthA LA08_11660 PF01527 Transposase LA08_11665 PF00665 Integrase core domain LA08_11665 PF13276 LA08_11665 LA08_11675 PF13936 Helix-turn-helix domain LA08_11680 PF01609 Transposase DDE domain LA08_11680 PF05598 LA08_11680 LA08_11690 PF12760 Transposase zinc-ribbon domain LA08_11690 PF12762 LA08_11690 LA08_11695 PF05593 LA08_11695 LA08_11705 PF00872 LA08_11705 LA08_11710 PF00665 Integrase core domain LA08_11715 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LA08_11735 PF01066 CDP-alcohol phosphatidyltransferase LA08_11740 PF01541 GIY-YIG catalytic domain LA08_11740 PF02151 UvrB/uvrC motif LA08_11740 PF08459 UvrC Helix-hairpin-helix N-terminal LA08_11745 PF01436 NHL repeat LA08_11750 PF01451 Low molecular weight phosphotyrosine protein phosphatase LA08_11755 PF02348 Cytidylyltransferase LA08_11760 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LA08_11765 PF00005 ABC transporter LA08_11765 PF00664 ABC transporter transmembrane region LA08_11770 PF02472 Biopolymer transport protein ExbD/TolR LA08_11775 PF01618 LA08_11775 LA08_11780 PF00753 Metallo-beta-lactamase superfamily LA08_11780 PF03772 LA08_11780 LA08_11780 PF13567 LA08_11780 LA08_11785 PF12760 Transposase zinc-ribbon domain LA08_11785 PF12762 LA08_11785 LA08_11800 PF00005 ABC transporter LA08_11805 PF02687 LA08_11805 LA08_11805 PF12704 MacB-like periplasmic core domain LA08_11815 PF03937 Flavinator of succinate dehydrogenase LA08_11820 PF13085 2Fe-2S iron-sulfur cluster binding domain LA08_11820 PF13534 4Fe-4S dicluster domain LA08_11830 PF00890 FAD binding domain LA08_11830 PF02910 Fumarate reductase flavoprotein C-term LA08_11835 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LA08_11840 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LA08_11845 PF07896 Protein of unknown function (DUF1674) LA08_11850 PF01571 Aminomethyltransferase folate-binding domain LA08_11850 PF08669 Glycine cleavage T-protein C-terminal barrel domain LA08_11860 PF00005 ABC transporter LA08_11860 PF08402 TOBE domain LA08_11865 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LA08_11865 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LA08_11870 PF02685 Glucokinase LA08_11875 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LA08_11880 PF00920 Dehydratase family LA08_11885 PF01081 KDPG and KHG aldolase LA08_11910 PF00072 Response regulator receiver domain LA08_11915 PF00072 Response regulator receiver domain LA08_11915 PF00512 His Kinase A (phospho-acceptor) domain LA08_11915 PF01590 GAF domain LA08_11915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA08_11915 PF08447 PAS fold LA08_11915 PF08448 PAS fold LA08_11915 PF13185 GAF domain LA08_11945 PF00990 GGDEF domain LA08_11965 PF02253 Phospholipase A1 LA08_11975 PF13410 Glutathione S-transferase, C-terminal domain LA08_11985 PF05681 LA08_11985 LA08_11985 PF05683 Fumarase C-terminus LA08_11990 PF00005 ABC transporter LA08_11995 PF00175 Oxidoreductase NAD-binding domain LA08_11995 PF00970 Oxidoreductase FAD-binding domain LA08_12000 PF00255 Glutathione peroxidase LA08_12015 PF08279 HTH domain LA08_12030 PF04542 Sigma-70 region 2 LA08_12030 PF08281 Sigma-70, region 4 LA08_12040 PF01047 MarR family LA08_12050 PF14542 GCN5-related N-acetyl-transferase LA08_12060 PF01694 Rhomboid family LA08_12070 PF00246 Zinc carboxypeptidase LA08_12075 PF00933 Glycosyl hydrolase family 3 N terminal domain LA08_12075 PF01915 Glycosyl hydrolase family 3 C-terminal domain LA08_12075 PF14310 Fibronectin type III-like domain LA08_12090 PF00563 EAL domain LA08_12090 PF00990 GGDEF domain LA08_12090 PF01590 GAF domain LA08_12100 PF00474 Sodium:solute symporter family LA08_12110 PF00933 Glycosyl hydrolase family 3 N terminal domain LA08_12110 PF01915 Glycosyl hydrolase family 3 C-terminal domain LA08_12115 PF05787 Bacterial protein of unknown function (DUF839) LA08_12130 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system LA08_12135 PF00342 Phosphoglucose isomerase LA08_12140 PF02261 Aspartate decarboxylase LA08_12145 PF02569 Pantoate-beta-alanine ligase LA08_12150 PF02548 Ketopantoate hydroxymethyltransferase LA08_12155 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LA08_12160 PF01743 Poly A polymerase head domain LA08_12160 PF12626 Polymerase A arginine-rich C-terminus LA08_12160 PF12627 Probable RNA and SrmB- binding site of polymerase A LA08_12170 PF02649 Type I GTP cyclohydrolase folE2 LA08_12175 PF01520 N-acetylmuramoyl-L-alanine amidase LA08_12175 PF11741 AMIN domain LA08_12190 PF01609 Transposase DDE domain LA08_12190 PF05598 LA08_12190 LA08_12195 PF00082 Subtilase family LA08_12195 PF03797 Autotransporter beta-domain LA08_12195 PF12951 LA08_12195 LA08_12205 PF16576 LA08_12205 LA08_12210 PF00873 AcrB/AcrD/AcrF family LA08_12215 PF02321 Outer membrane efflux protein LA08_12220 PF00512 His Kinase A (phospho-acceptor) domain LA08_12220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA08_12225 PF00072 Response regulator receiver domain LA08_12225 PF00196 Bacterial regulatory proteins, luxR family LA08_12230 PF12951 LA08_12230 LA08_12235 PF13358 DDE superfamily endonuclease LA08_12235 PF13551 Winged helix-turn helix LA08_12235 PF13592 LA08_12235 LA08_12240 PF13018 LA08_12240 LA08_12265 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LA08_12270 PF00800 Prephenate dehydratase LA08_12270 PF01817 Chorismate mutase type II LA08_12270 PF01842 ACT domain LA08_12275 PF00266 Aminotransferase class-V LA08_12280 PF00174 Oxidoreductase molybdopterin binding domain LA08_12290 PF01794 LA08_12290 LA08_12295 PF16697 LA08_12295 LA08_12300 PF09650 LA08_12300 LA08_12305 PF05597 LA08_12305 LA08_12310 PF04471 Restriction endonuclease LA08_12315 PF00392 Bacterial regulatory proteins, gntR family LA08_12315 PF07702 UTRA domain LA08_12320 PF01979 Amidohydrolase family LA08_12325 PF07969 Amidohydrolase family LA08_12330 PF00221 Aromatic amino acid lyase LA08_12335 PF05013 N-formylglutamate amidohydrolase LA08_12340 PF01175 Urocanase LA08_12340 PF17391 LA08_12340 LA08_12340 PF17392 LA08_12340 LA08_12345 PF01757 LA08_12345 LA08_12360 PF00521 DNA gyrase/topoisomerase IV, subunit A LA08_12360 PF03989 DNA gyrase C-terminal domain, beta-propeller LA08_12365 PF01008 Initiation factor 2 subunit family LA08_12375 PF11218 LA08_12375 LA08_12380 PF00152 tRNA synthetases class II (D, K and N) LA08_12385 PF00533 BRCA1 C Terminus (BRCT) domain LA08_12385 PF01653 NAD-dependent DNA ligase adenylation domain LA08_12385 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LA08_12385 PF03120 NAD-dependent DNA ligase OB-fold domain LA08_12385 PF12826 Helix-hairpin-helix motif LA08_12395 PF04354 ZipA, C-terminal FtsZ-binding domain LA08_12400 PF02463 RecF/RecN/SMC N terminal domain LA08_12405 PF01281 Ribosomal protein L9, N-terminal domain LA08_12405 PF03948 Ribosomal protein L9, C-terminal domain LA08_12410 PF01084 Ribosomal protein S18 LA08_12415 PF01250 Ribosomal protein S6 LA08_12420 PF01521 Iron-sulphur cluster biosynthesis LA08_12430 PF00152 tRNA synthetases class II (D, K and N) LA08_12430 PF01336 OB-fold nucleic acid binding domain LA08_12455 PF00484 Carbonic anhydrase LA08_12460 PF06052 3-hydroxyanthranilic acid dioxygenase LA08_12470 PF00266 Aminotransferase class-V LA08_12475 PF01494 FAD binding domain LA08_12480 PF00929 Exonuclease LA08_12480 PF08411 Exonuclease C-terminal LA08_12485 PF09365 LA08_12485 LA08_12490 PF00248 Aldo/keto reductase family LA08_12495 PF11159 LA08_12495 LA08_12500 PF06189 LA08_12500 LA08_12505 PF01513 ATP-NAD kinase LA08_12515 PF01170 Putative RNA methylase family UPF0020 LA08_12515 PF02926 THUMP domain LA08_12515 PF10672 S-adenosylmethionine-dependent methyltransferase LA08_12530 PF00583 Acetyltransferase (GNAT) family LA08_12535 PF05728 Uncharacterised protein family (UPF0227) LA08_12540 PF03473 MOSC domain LA08_12545 PF01510 N-acetylmuramoyl-L-alanine amidase LA08_12550 PF07920 Protein of unknown function (DUF1684) LA08_12555 PF00581 Rhodanese-like domain LA08_12560 PF00293 NUDIX domain LA08_12560 PF06945 LA08_12560 LA08_12565 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LA08_12565 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LA08_12570 PF00378 Enoyl-CoA hydratase/isomerase family LA08_12580 PF00633 Helix-hairpin-helix motif LA08_12580 PF00730 HhH-GPD superfamily base excision DNA repair protein LA08_12590 PF00484 Carbonic anhydrase LA08_12595 PF01609 Transposase DDE domain LA08_12595 PF05598 LA08_12595 LA08_12610 PF01610 LA08_12610 LA08_12610 PF13542 LA08_12610 LA08_12625 PF07396 Phosphate-selective porin O and P LA08_12630 PF12849 PBP superfamily domain LA08_12635 PF12849 PBP superfamily domain LA08_12640 PF00528 Binding-protein-dependent transport system inner membrane component LA08_12645 PF00528 Binding-protein-dependent transport system inner membrane component LA08_12650 PF00005 ABC transporter LA08_12655 PF01895 PhoU domain LA08_12660 PF11776 Domain of unknown function (DUF3315) LA08_12665 PF00929 Exonuclease LA08_12670 PF13546 LA08_12670 LA08_12675 PF01609 Transposase DDE domain LA08_12675 PF05598 LA08_12675 LA08_12680 PF00872 LA08_12680 LA08_12685 PF13546 LA08_12685 LA08_12710 PF13495 Phage integrase, N-terminal SAM-like domain LA08_12715 PF02355 Protein export membrane protein LA08_12715 PF07549 SecD/SecF GG Motif LA08_12720 PF02355 Protein export membrane protein LA08_12720 PF07549 SecD/SecF GG Motif LA08_12720 PF13721 SecD export protein N-terminal TM region LA08_12725 PF02699 Preprotein translocase subunit LA08_12730 PF01702 Queuine tRNA-ribosyltransferase LA08_12735 PF02547 Queuosine biosynthesis protein LA08_12745 PF01037 AsnC family LA08_12745 PF13412 Winged helix-turn-helix DNA-binding LA08_12750 PF00202 Aminotransferase class-III LA08_12760 PF04488 Glycosyltransferase sugar-binding region containing DXD motif LA08_12780 PF02333 Phytase LA08_12790 PF07715 TonB-dependent Receptor Plug Domain LA08_12795 PF14681 Uracil phosphoribosyltransferase LA08_12810 PF13358 DDE superfamily endonuclease LA08_12810 PF13551 Winged helix-turn helix LA08_12810 PF13592 LA08_12810 LA08_12815 PF01019 Gamma-glutamyltranspeptidase LA08_12820 PF00037 4Fe-4S binding domain LA08_12835 PF01467 Cytidylyltransferase LA08_12840 PF03602 Conserved hypothetical protein 95 LA08_12845 PF00183 Hsp90 protein LA08_12845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA08_12855 PF13546 LA08_12855 LA08_12860 PF00581 Rhodanese-like domain LA08_12860 PF00899 ThiF family LA08_12870 PF12760 Transposase zinc-ribbon domain LA08_12870 PF12762 LA08_12870 LA08_12875 PF01609 Transposase DDE domain LA08_12875 PF05598 LA08_12875 LA08_12890 PF01609 Transposase DDE domain LA08_12890 PF05598 LA08_12890 LA08_12900 PF01609 Transposase DDE domain LA08_12900 PF05598 LA08_12900 LA08_12905 PF13936 Helix-turn-helix domain LA08_12930 PF00994 Probable molybdopterin binding domain LA08_12930 PF03453 MoeA N-terminal region (domain I and II) LA08_12930 PF03454 MoeA C-terminal region (domain IV) LA08_12935 PF01926 50S ribosome-binding GTPase LA08_12935 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LA08_12940 PF13360 PQQ-like domain LA08_12945 PF09976 Tetratricopeptide repeat LA08_12950 PF13413 Helix-turn-helix domain LA08_12950 PF13464 LA08_12950 LA08_12955 PF13432 Tetratricopeptide repeat LA08_12960 PF04055 Radical SAM superfamily LA08_12965 PF00334 Nucleoside diphosphate kinase LA08_12970 PF00440 Bacterial regulatory proteins, tetR family LA08_12975 PF00378 Enoyl-CoA hydratase/isomerase family LA08_12975 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LA08_12975 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LA08_12980 PF00108 Thiolase, N-terminal domain LA08_12980 PF02803 Thiolase, C-terminal domain LA08_12985 PF00654 Voltage gated chloride channel LA08_12995 PF02537 LA08_12995 LA08_13000 PF02641 Uncharacterized ACR, COG1993 LA08_13005 PF00004 ATPase family associated with various cellular activities (AAA) LA08_13005 PF12002 MgsA AAA+ ATPase C terminal LA08_13005 PF16193 LA08_13005 LA08_13020 PF03548 Outer membrane lipoprotein carrier protein LolA LA08_13025 PF01841 Transglutaminase-like superfamily LA08_13025 PF12969 Domain of Unknown Function with PDB structure (DUF3857) LA08_13030 PF01580 FtsK/SpoIIIE family LA08_13030 PF09397 Ftsk gamma domain LA08_13030 PF13491 LA08_13030 LA08_13035 PF07992 Pyridine nucleotide-disulphide oxidoreductase LA08_13040 PF04339 LA08_13040 LA08_13050 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LA08_13055 PF01176 Translation initiation factor 1A / IF-1 LA08_13060 PF00004 ATPase family associated with various cellular activities (AAA) LA08_13060 PF02861 Clp amino terminal domain LA08_13060 PF07724 AAA domain (Cdc48 subfamily) LA08_13060 PF10431 C-terminal, D2-small domain, of ClpB protein LA08_13065 PF02617 ATP-dependent Clp protease adaptor protein ClpS LA08_13070 PF00293 NUDIX domain LA08_13075 PF03054 tRNA methyl transferase LA08_13080 PF04356 Protein of unknown function (DUF489) LA08_13085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA08_13100 PF00563 EAL domain LA08_13100 PF00990 GGDEF domain LA08_13100 PF08447 PAS fold LA08_13105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA08_13105 PF07730 Histidine kinase LA08_13105 PF08448 PAS fold LA08_13105 PF13426 PAS domain LA08_13110 PF00072 Response regulator receiver domain LA08_13110 PF00563 EAL domain LA08_13110 PF00990 GGDEF domain LA08_13115 PF00512 His Kinase A (phospho-acceptor) domain LA08_13115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA08_13125 PF04316 Anti-sigma-28 factor, FlgM LA08_13130 PF13144 SAF-like LA08_13135 PF00072 Response regulator receiver domain LA08_13135 PF01584 CheW-like domain LA08_13140 PF00460 Flagella basal body rod protein LA08_13145 PF00460 Flagella basal body rod protein LA08_13145 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LA08_13150 PF03963 LA08_13150 LA08_13150 PF13860 FlgD Ig-like domain LA08_13150 PF13861 FlgD Tudor-like domain LA08_13155 PF00460 Flagella basal body rod protein LA08_13155 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LA08_13155 PF07559 Flagellar basal body protein FlaE LA08_13160 PF00460 Flagella basal body rod protein LA08_13160 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LA08_13170 PF00460 Flagella basal body rod protein LA08_13170 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LA08_13175 PF02107 LA08_13175 LA08_13180 PF02119 LA08_13180 LA08_13185 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LA08_13185 PF10135 LA08_13185 LA08_13190 PF00460 Flagella basal body rod protein LA08_13190 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LA08_13195 PF00669 Bacterial flagellin N-terminal helical region LA08_13195 PF00700 Bacterial flagellin C-terminal helical region LA08_13200 PF00669 Bacterial flagellin N-terminal helical region LA08_13200 PF00700 Bacterial flagellin C-terminal helical region LA08_13205 PF02465 LA08_13205 LA08_13205 PF07195 LA08_13205 LA08_13205 PF07196 Flagellin hook IN motif LA08_13210 PF02561 Flagellar protein FliS LA08_13220 PF16823 LA08_13220 LA08_13225 PF00072 Response regulator receiver domain LA08_13225 PF00196 Bacterial regulatory proteins, luxR family LA08_13230 PF00309 LA08_13230 LA08_13230 PF04552 Sigma-54, DNA binding domain LA08_13230 PF04963 Sigma-54 factor, core binding domain LA08_13235 PF00072 Response regulator receiver domain LA08_13240 PF00158 Sigma-54 interaction domain LA08_13240 PF02954 Bacterial regulatory protein, Fis family LA08_13240 PF06490 LA08_13240 LA08_13245 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LA08_13255 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LA08_13255 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LA08_13260 PF13561 Enoyl-(Acyl carrier protein) reductase LA08_13265 PF13561 Enoyl-(Acyl carrier protein) reductase LA08_13270 PF00132 Bacterial transferase hexapeptide (six repeats) LA08_13275 PF00355 Rieske [2Fe-2S] domain LA08_13275 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LA08_13280 PF00132 Bacterial transferase hexapeptide (six repeats) LA08_13285 PF05050 Methyltransferase FkbM domain LA08_13290 PF00535 Glycosyl transferase family 2 LA08_13300 PF02049 LA08_13300 LA08_13305 PF01514 Secretory protein of YscJ/FliF family LA08_13305 PF08345 LA08_13305 LA08_13310 PF01706 FliG C-terminal domain LA08_13310 PF14841 FliG middle domain LA08_13310 PF14842 FliG N-terminal domain LA08_13315 PF02108 LA08_13315 LA08_13320 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LA08_13325 PF02050 Flagellar FliJ protein LA08_13330 PF02120 Flagellar hook-length control protein FliK LA08_13335 PF03748 LA08_13335 LA08_13340 PF01052 Surface presentation of antigens (SPOA) LA08_13340 PF02154 Flagellar motor switch protein FliM LA08_13345 PF01052 Surface presentation of antigens (SPOA) LA08_13350 PF04347 LA08_13350 LA08_13355 PF00813 LA08_13355 LA08_13365 PF01313 LA08_13365 LA08_13370 PF01311 LA08_13370 LA08_13375 PF00990 GGDEF domain LA08_13375 PF07494 Two component regulator propeller LA08_13375 PF07495 Y_Y_Y domain LA08_13380 PF00990 GGDEF domain LA08_13380 PF07495 Y_Y_Y domain LA08_13385 PF00563 EAL domain LA08_13385 PF00990 GGDEF domain LA08_13385 PF03707 LA08_13385 LA08_13390 PF01312 FlhB HrpN YscU SpaS Family LA08_13395 PF00771 FHIPEP family LA08_13400 PF00448 SRP54-type protein, GTPase domain LA08_13405 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LA08_13410 PF04539 Sigma-70 region 3 LA08_13410 PF04542 Sigma-70 region 2 LA08_13410 PF04545 Sigma-70, region 4 LA08_13415 PF00072 Response regulator receiver domain LA08_13420 PF04344 Chemotaxis phosphatase, CheZ LA08_13425 PF01584 CheW-like domain LA08_13425 PF01627 Hpt domain LA08_13425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA08_13425 PF02895 Signal transducing histidine kinase, homodimeric domain LA08_13455 PF13546 LA08_13455 LA08_13465 PF01609 Transposase DDE domain LA08_13465 PF05598 LA08_13465 LA08_13495 PF00034 Cytochrome c LA08_13500 PF00034 Cytochrome c LA08_13545 PF12760 Transposase zinc-ribbon domain LA08_13545 PF12762 LA08_13545 LA08_13550 PF13546 LA08_13550 LA08_13555 PF00005 ABC transporter LA08_13560 PF00005 ABC transporter LA08_13560 PF00664 ABC transporter transmembrane region LA08_13575 PF00665 Integrase core domain LA08_13575 PF13936 Helix-turn-helix domain LA08_13585 PF01654 LA08_13585 LA08_13590 PF12760 Transposase zinc-ribbon domain LA08_13590 PF12762 LA08_13590 LA08_13600 PF08173 LA08_13600 LA08_13610 PF07690 Major Facilitator Superfamily LA08_13615 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LA08_13615 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain LA08_13620 PF00171 Aldehyde dehydrogenase family LA08_13625 PF00696 Amino acid kinase family LA08_13625 PF01472 PUA domain LA08_13630 PF03795 YCII-related domain LA08_13635 PF07883 Cupin domain LA08_13640 PF00206 Lyase LA08_13645 PF01118 Semialdehyde dehydrogenase, NAD binding domain LA08_13655 PF00696 Amino acid kinase family LA08_13655 PF04768 Protein of unknown function (DUF619) LA08_13660 PF01546 Peptidase family M20/M25/M40 LA08_13660 PF07687 Peptidase dimerisation domain LA08_13665 PF13508 Acetyltransferase (GNAT) domain LA08_13670 PF00764 Arginosuccinate synthase LA08_13675 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LA08_13675 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LA08_13685 PF01406 tRNA synthetases class I (C) catalytic domain LA08_13685 PF09190 DALR domain LA08_13690 PF02657 Fe-S metabolism associated domain LA08_13695 PF05977 Transmembrane secretion effector LA08_13700 PF03572 Peptidase family S41 LA08_13705 PF01258 Prokaryotic dksA/traR C4-type zinc finger LA08_13710 PF01809 LA08_13710 LA08_13715 PF01979 Amidohydrolase family LA08_13720 PF01551 Peptidase family M23 LA08_13740 PF16242 LA08_13740 LA08_13750 PF13546 LA08_13750 LA08_13755 PF01609 Transposase DDE domain LA08_13755 PF05598 LA08_13755 LA08_13760 PF13546 LA08_13760 LA08_13770 PF01095 Pectinesterase LA08_13785 PF00295 Glycosyl hydrolases family 28 LA08_13795 PF13419 Haloacid dehalogenase-like hydrolase LA08_13800 PF13489 Methyltransferase domain LA08_13805 PF01979 Amidohydrolase family LA08_13815 PF01132 Elongation factor P (EF-P) OB domain LA08_13815 PF08207 Elongation factor P (EF-P) KOW-like domain LA08_13815 PF09285 Elongation factor P, C-terminal LA08_13820 PF13394 4Fe-4S single cluster domain LA08_13825 PF00563 EAL domain LA08_13825 PF00672 HAMP domain LA08_13825 PF00990 GGDEF domain LA08_13825 PF17203 LA08_13825 LA08_13830 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein LA08_13835 PF00588 SpoU rRNA Methylase family LA08_13840 PF00459 Inositol monophosphatase family LA08_13845 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LA08_13845 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LA08_13850 PF00545 ribonuclease LA08_13855 PF01337 Barstar (barnase inhibitor) LA08_13870 PF00005 ABC transporter LA08_13870 PF12848 ABC transporter LA08_13870 PF16326 LA08_13870 LA08_13875 PF00270 DEAD/DEAH box helicase LA08_13875 PF00271 Helicase conserved C-terminal domain LA08_13875 PF03880 DbpA RNA binding domain LA08_13880 PF00156 Phosphoribosyl transferase domain LA08_13885 PF02696 LA08_13885 LA08_13890 PF00135 Carboxylesterase family LA08_13895 PF00043 Glutathione S-transferase, C-terminal domain LA08_13895 PF02798 Glutathione S-transferase, N-terminal domain LA08_13900 PF00313 'Cold-shock' DNA-binding domain LA08_13905 PF02639 LA08_13905 LA08_13910 PF07152 YaeQ protein LA08_13915 PF03486 HI0933-like protein LA08_13920 PF00563 EAL domain LA08_13920 PF00990 GGDEF domain LA08_13920 PF13188 PAS domain LA08_13925 PF01435 Peptidase family M48 LA08_13930 PF00749 tRNA synthetases class I (E and Q), catalytic domain LA08_13935 PF13561 Enoyl-(Acyl carrier protein) reductase LA08_13940 PF05233 LA08_13940 LA08_13940 PF07879 LA08_13940 LA08_13950 PF01963 LA08_13950 LA08_13955 PF07920 Protein of unknown function (DUF1684) LA08_13960 PF01119 DNA mismatch repair protein, C-terminal domain LA08_13960 PF08676 MutL C terminal dimerisation domain LA08_13960 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA08_13965 PF01520 N-acetylmuramoyl-L-alanine amidase LA08_13965 PF11741 AMIN domain LA08_13970 PF02367 Uncharacterised P-loop hydrolase UPF0079 LA08_13975 PF01256 Carbohydrate kinase LA08_13975 PF03853 YjeF-related protein N-terminus LA08_13980 PF08331 LA08_13980 LA08_13980 PF13484 LA08_13980 LA08_13990 PF02601 LA08_13990 LA08_13990 PF13742 LA08_13990 LA08_13995 PF06057 Bacterial virulence protein (VirJ) LA08_14005 PF03781 Sulfatase-modifying factor enzyme 1 LA08_14020 PF00570 HRDC domain LA08_14020 PF01612 3'-5' exonuclease LA08_14030 PF13298 DNA polymerase Ligase (LigD) LA08_14040 PF00816 H-NS histone family LA08_14070 PF05016 Plasmid stabilisation system protein LA08_14075 PF01402 Ribbon-helix-helix protein, copG family LA08_14085 PF01402 Ribbon-helix-helix protein, copG family LA08_14090 PF00872 LA08_14090 LA08_14100 PF12760 Transposase zinc-ribbon domain LA08_14100 PF12762 LA08_14100 LA08_14125 PF11743 LA08_14125 LA08_14135 PF04386 Stringent starvation protein B LA08_14140 PF00043 Glutathione S-transferase, C-terminal domain LA08_14140 PF13417 Glutathione S-transferase, N-terminal domain LA08_14145 PF02167 Cytochrome C1 family LA08_14150 PF00032 Cytochrome b(C-terminal)/b6/petD LA08_14150 PF00033 Cytochrome b(N-terminal)/b6/petB LA08_14155 PF00355 Rieske [2Fe-2S] domain LA08_14155 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal LA08_14165 PF01464 Transglycosylase SLT domain LA08_14185 PF00919 Uncharacterized protein family UPF0004 LA08_14185 PF01938 TRAM domain LA08_14185 PF04055 Radical SAM superfamily LA08_14190 PF02562 PhoH-like protein LA08_14200 PF02130 Uncharacterized protein family UPF0054 LA08_14210 PF00571 CBS domain LA08_14210 PF03471 Transporter associated domain LA08_14215 PF13387 LA08_14215 LA08_14220 PF01544 CorA-like Mg2+ transporter protein LA08_14225 PF00171 Aldehyde dehydrogenase family LA08_14235 PF00528 Binding-protein-dependent transport system inner membrane component LA08_14240 PF00528 Binding-protein-dependent transport system inner membrane component LA08_14245 PF00005 ABC transporter LA08_14245 PF08402 TOBE domain LA08_14250 PF02321 Outer membrane efflux protein LA08_14255 PF07690 Major Facilitator Superfamily LA08_14260 PF13533 Biotin-lipoyl like LA08_14260 PF16576 LA08_14260 LA08_14265 PF13546 LA08_14265 LA08_14275 PF00120 Glutamine synthetase, catalytic domain LA08_14285 PF00120 Glutamine synthetase, catalytic domain LA08_14290 PF01266 FAD dependent oxidoreductase LA08_14295 PF00072 Response regulator receiver domain LA08_14295 PF00990 GGDEF domain LA08_14300 PF00083 Sugar (and other) transporter LA08_14300 PF07690 Major Facilitator Superfamily LA08_14310 PF00384 Molybdopterin oxidoreductase LA08_14310 PF01568 Molydopterin dinucleotide binding domain LA08_14315 PF02634 FdhD/NarQ family LA08_14320 PF07690 Major Facilitator Superfamily LA08_14340 PF00202 Aminotransferase class-III LA08_14345 PF13086 AAA domain LA08_14345 PF13087 AAA domain LA08_14355 PF04286 LA08_14355 LA08_14360 PF00072 Response regulator receiver domain LA08_14360 PF00512 His Kinase A (phospho-acceptor) domain LA08_14360 PF01627 Hpt domain LA08_14360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA08_14360 PF03924 CHASE domain LA08_14360 PF08448 PAS fold LA08_14360 PF13426 PAS domain LA08_14365 PF00072 Response regulator receiver domain LA08_14365 PF13487 HD domain LA08_14370 PF01609 Transposase DDE domain LA08_14370 PF05598 LA08_14370 LA08_14380 PF05088 LA08_14380 LA08_14380 PF12466 LA08_14380 LA08_14385 PF00440 Bacterial regulatory proteins, tetR family LA08_14385 PF16859 LA08_14385 LA08_14390 PF16576 LA08_14390 LA08_14395 PF00873 AcrB/AcrD/AcrF family LA08_14405 PF12760 Transposase zinc-ribbon domain LA08_14405 PF12762 LA08_14405 LA08_14415 PF00356 Bacterial regulatory proteins, lacI family LA08_14415 PF13377 Periplasmic binding protein-like domain LA08_14420 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LA08_14420 PF00381 PTS HPr component phosphorylation site LA08_14420 PF00391 PEP-utilising enzyme, mobile domain LA08_14420 PF02896 PEP-utilising enzyme, TIM barrel domain LA08_14420 PF05524 PEP-utilising enzyme, N-terminal LA08_14425 PF00294 pfkB family carbohydrate kinase LA08_14430 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LA08_14435 PF04966 Carbohydrate-selective porin, OprB family LA08_14445 PF01609 Transposase DDE domain LA08_14445 PF05598 LA08_14445 LA08_14455 PF01609 Transposase DDE domain LA08_14455 PF05598 LA08_14455 LA08_14495 PF13503 LA08_14495 LA08_14500 PF05954 Phage late control gene D protein (GPD) LA08_14500 PF10106 LA08_14500 LA08_14500 PF13296 LA08_14500 LA08_14520 PF05954 Phage late control gene D protein (GPD) LA08_14525 PF13546 LA08_14525 LA08_14530 PF06627 Protein of unknown function (DUF1153) LA08_14540 PF13546 LA08_14540 LA08_14555 PF08845 LA08_14555 LA08_14580 PF01609 Transposase DDE domain LA08_14580 PF05598 LA08_14580 LA08_14595 PF00593 TonB dependent receptor LA08_14595 PF07715 TonB-dependent Receptor Plug Domain LA08_14600 PF04314 Protein of unknown function (DUF461) LA08_14610 PF00593 TonB dependent receptor LA08_14610 PF07715 TonB-dependent Receptor Plug Domain LA08_14620 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LA08_14620 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LA08_14625 PF07715 TonB-dependent Receptor Plug Domain LA08_14630 PF00593 TonB dependent receptor LA08_14640 PF01618 LA08_14640 LA08_14645 PF00691 OmpA family LA08_14645 PF13677 LA08_14645 LA08_14650 PF13614 AAA domain LA08_14655 PF01584 CheW-like domain LA08_14660 PF13466 STAS domain LA08_14665 PF00072 Response regulator receiver domain LA08_14670 PF01584 CheW-like domain LA08_14670 PF01627 Hpt domain LA08_14670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA08_14670 PF02895 Signal transducing histidine kinase, homodimeric domain LA08_14690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA08_14700 PF13557 LA08_14700 LA08_14705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA08_14710 PF12760 Transposase zinc-ribbon domain LA08_14710 PF12762 LA08_14710 LA08_14715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA08_14715 PF00672 HAMP domain LA08_14715 PF12729 LA08_14715 LA08_14725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA08_14725 PF00672 HAMP domain LA08_14725 PF05227 CHASE3 domain LA08_14730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA08_14730 PF12729 LA08_14730 LA08_14735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA08_14735 PF12729 LA08_14735 LA08_14740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA08_14740 PF00672 HAMP domain LA08_14740 PF12729 LA08_14740 LA08_14755 PF07238 PilZ domain LA08_14755 PF07317 Flagellar regulator YcgR LA08_14760 PF01584 CheW-like domain LA08_14785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA08_14785 PF00672 HAMP domain LA08_14785 PF12729 LA08_14785 LA08_14790 PF01739 CheR methyltransferase, SAM binding domain LA08_14790 PF03705 CheR methyltransferase, all-alpha domain LA08_14795 PF03975 CheD chemotactic sensory transduction LA08_14800 PF00072 Response regulator receiver domain LA08_14800 PF01339 CheB methylesterase LA08_14805 PF00563 EAL domain LA08_14805 PF00990 GGDEF domain LA08_14805 PF13185 GAF domain LA08_14805 PF13426 PAS domain LA08_14820 PF00561 alpha/beta hydrolase fold LA08_14825 PF00330 Aconitase family (aconitate hydratase) LA08_14825 PF06434 Aconitate hydratase 2 N-terminus LA08_14825 PF11791 Aconitate B N-terminal domain LA08_14830 PF01850 PIN domain LA08_14835 PF04014 Antidote-toxin recognition MazE LA08_14840 PF00330 Aconitase family (aconitate hydratase) LA08_14840 PF00694 Aconitase C-terminal domain LA08_14850 PF00501 AMP-binding enzyme LA08_14850 PF13193 AMP-binding enzyme C-terminal domain LA08_14855 PF00378 Enoyl-CoA hydratase/isomerase family LA08_14860 PF00072 Response regulator receiver domain LA08_14860 PF00512 His Kinase A (phospho-acceptor) domain LA08_14860 PF01627 Hpt domain LA08_14860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA08_14870 PF00072 Response regulator receiver domain LA08_14870 PF01966 HD domain LA08_14875 PF00152 tRNA synthetases class II (D, K and N) LA08_14875 PF01336 OB-fold nucleic acid binding domain LA08_14885 PF04397 LytTr DNA-binding domain LA08_14900 PF13542 LA08_14900 LA08_14930 PF01368 DHH family LA08_14930 PF02272 DHHA1 domain LA08_14940 PF01272 Transcription elongation factor, GreA/GreB, C-term LA08_14940 PF03449 Transcription elongation factor, N-terminal LA08_14945 PF02142 MGS-like domain LA08_14945 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LA08_14945 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LA08_14955 PF00117 Glutamine amidotransferase class-I LA08_14955 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LA08_14960 PF01113 Dihydrodipicolinate reductase, N-terminus LA08_14960 PF05173 Dihydrodipicolinate reductase, C-terminus LA08_14970 PF03473 MOSC domain LA08_14970 PF03475 3-alpha domain LA08_14975 PF00155 Aminotransferase class I and II LA08_14995 PF02421 Ferrous iron transport protein B LA08_14995 PF07664 LA08_14995 LA08_14995 PF07670 Nucleoside recognition LA08_15000 PF04023 FeoA domain LA08_15005 PF00378 Enoyl-CoA hydratase/isomerase family LA08_15010 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LA08_15015 PF00682 HMGL-like LA08_15020 PF00106 short chain dehydrogenase LA08_15025 PF01132 Elongation factor P (EF-P) OB domain LA08_15025 PF08207 Elongation factor P (EF-P) KOW-like domain LA08_15025 PF09285 Elongation factor P, C-terminal LA08_15045 PF00083 Sugar (and other) transporter LA08_15055 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LA08_15055 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LA08_15065 PF01055 Glycosyl hydrolases family 31 LA08_15065 PF07691 PA14 domain LA08_15065 PF16338 LA08_15065 LA08_15065 PF17137 LA08_15065 LA08_15075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA08_15075 PF03466 LysR substrate binding domain LA08_15080 PF01081 KDPG and KHG aldolase LA08_15085 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LA08_15085 PF13378 Enolase C-terminal domain-like LA08_15090 PF08450 SMP-30/Gluconolaconase/LRE-like region LA08_15095 PF05035 2-keto-3-deoxy-galactonokinase LA08_15100 PF00037 4Fe-4S binding domain LA08_15100 PF11953 Domain of unknown function (DUF3470) LA08_15110 PF00701 Dihydrodipicolinate synthetase family LA08_15115 PF13740 ACT domain LA08_15120 PF06877 Regulator of ribonuclease activity B LA08_15125 PF00578 AhpC/TSA family LA08_15130 PF02562 PhoH-like protein LA08_15130 PF13638 PIN domain LA08_15140 PF08543 Phosphomethylpyrimidine kinase LA08_15165 PF00581 Rhodanese-like domain LA08_15165 PF09335 LA08_15165 LA08_15170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA08_15170 PF03466 LysR substrate binding domain LA08_15175 PF02678 Pirin LA08_15195 PF01745 Isopentenyl transferase LA08_15200 PF03796 DnaB-like helicase C terminal domain LA08_15205 PF00772 DnaB-like helicase N terminal domain LA08_15215 PF13730 LA08_15215 LA08_15225 PF02599 Global regulator protein family LA08_15230 PF01411 tRNA synthetases class II (A) LA08_15230 PF02272 DHHA1 domain LA08_15230 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LA08_15235 PF02631 RecX family LA08_15245 PF00154 recA bacterial DNA recombination protein LA08_15250 PF00717 Peptidase S24-like LA08_15250 PF01726 LexA DNA binding domain LA08_15255 PF03109 LA08_15255 LA08_15260 PF02464 Competence-damaged protein LA08_15265 PF01926 50S ribosome-binding GTPase LA08_15265 PF13167 LA08_15265 LA08_15265 PF16360 LA08_15265 LA08_15270 PF17209 LA08_15270 LA08_15275 PF01715 IPP transferase LA08_15280 PF00809 Pterin binding enzyme LA08_15285 PF00004 ATPase family associated with various cellular activities (AAA) LA08_15285 PF01434 Peptidase family M41 LA08_15285 PF06480 FtsH Extracellular LA08_15290 PF01728 FtsJ-like methyltransferase LA08_15295 PF01985 CRS1 / YhbY (CRM) domain LA08_15300 PF04430 Protein of unknown function (DUF498/DUF598) LA08_15305 PF01476 LysM domain LA08_15305 PF01551 Peptidase family M23 LA08_15310 PF09335 LA08_15310 LA08_15315 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) LA08_15320 PF01975 Survival protein SurE LA08_15325 PF01713 Smr domain LA08_15335 PF01142 tRNA pseudouridine synthase D (TruD) LA08_15340 PF02542 YgbB family LA08_15350 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LA08_15355 PF04977 Septum formation initiator LA08_15360 PF00113 Enolase, C-terminal TIM barrel domain LA08_15360 PF03952 Enolase, N-terminal domain LA08_15370 PF00793 DAHP synthetase I family LA08_15375 PF00117 Glutamine amidotransferase class-I LA08_15375 PF06418 CTP synthase N-terminus LA08_15385 PF00204 DNA gyrase B LA08_15385 PF00986 DNA gyrase B subunit, carboxyl terminus LA08_15385 PF01751 Toprim domain LA08_15385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA08_15395 PF00450 Serine carboxypeptidase LA08_15400 PF02698 DUF218 domain LA08_15405 PF01384 LA08_15405 LA08_15410 PF01865 Protein of unknown function DUF47 LA08_15420 PF00571 CBS domain LA08_15420 PF01595 LA08_15420 LA08_15420 PF03471 Transporter associated domain LA08_15430 PF16242 LA08_15430 LA08_15435 PF00296 Luciferase-like monooxygenase LA08_15455 PF00083 Sugar (and other) transporter LA08_15465 PF00005 ABC transporter LA08_15475 PF04055 Radical SAM superfamily LA08_15480 PF14907 Uncharacterised nucleotidyltransferase LA08_15485 PF13936 Helix-turn-helix domain LA08_15490 PF00534 Glycosyl transferases group 1 LA08_15490 PF13579 Glycosyl transferase 4-like domain LA08_15495 PF00534 Glycosyl transferases group 1 LA08_15495 PF13439 Glycosyltransferase Family 4 LA08_15500 PF08241 Methyltransferase domain LA08_15505 PF01979 Amidohydrolase family LA08_15510 PF13649 Methyltransferase domain LA08_15515 PF02706 Chain length determinant protein LA08_15525 PF00535 Glycosyl transferase family 2 LA08_15530 PF01943 LA08_15530 LA08_15535 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LA08_15540 PF13480 Acetyltransferase (GNAT) domain LA08_15550 PF00132 Bacterial transferase hexapeptide (six repeats) LA08_15555 PF05523 WxcM-like, C-terminal LA08_15560 PF01292 Prokaryotic cytochrome b561 LA08_15570 PF00034 Cytochrome c LA08_15580 PF04542 Sigma-70 region 2 LA08_15580 PF04545 Sigma-70, region 4 LA08_15585 PF13490 Putative zinc-finger LA08_15590 PF00082 Subtilase family LA08_15595 PF01578 LA08_15595 LA08_15600 PF04995 LA08_15600 LA08_15605 PF03100 CcmE LA08_15610 PF01578 LA08_15610 LA08_15610 PF16327 LA08_15610 LA08_15615 PF08534 Redoxin LA08_15620 PF03918 Cytochrome C biogenesis protein LA08_15630 PF03377 Xanthomonas avirulence protein, Avr/PthA LA08_15645 PF05598 LA08_15645 LA08_15650 PF00873 AcrB/AcrD/AcrF family LA08_15655 PF16576 LA08_15655 LA08_15675 PF01609 Transposase DDE domain LA08_15675 PF05598 LA08_15675 LA08_15705 PF00072 Response regulator receiver domain LA08_15705 PF00486 Transcriptional regulatory protein, C terminal LA08_15710 PF00034 Cytochrome c LA08_15710 PF03150 Di-haem cytochrome c peroxidase LA08_15715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA08_15720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA08_15720 PF03466 LysR substrate binding domain LA08_15725 PF06812 LA08_15725 LA08_15745 PF00069 Protein kinase domain LA08_15745 PF03781 Sulfatase-modifying factor enzyme 1 LA08_15750 PF13672 Protein phosphatase 2C LA08_15755 PF09867 Uncharacterized protein conserved in bacteria (DUF2094) LA08_15760 PF06744 LA08_15760 LA08_15760 PF06761 LA08_15760 LA08_15760 PF14331 LA08_15760 LA08_15765 PF00691 OmpA family LA08_15765 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) LA08_15770 PF05936 LA08_15770 LA08_15775 PF00498 FHA domain LA08_15785 PF05954 Phage late control gene D protein (GPD) LA08_15790 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LA08_15800 PF14441 LA08_15800 LA08_15805 PF00004 ATPase family associated with various cellular activities (AAA) LA08_15805 PF07724 AAA domain (Cdc48 subfamily) LA08_15805 PF10431 C-terminal, D2-small domain, of ClpB protein LA08_15810 PF06996 LA08_15810 LA08_15815 PF05947 LA08_15815 LA08_15820 PF04965 Gene 25-like lysozyme LA08_15825 PF07024 ImpE protein LA08_15830 PF05638 Protein of unknown function (DUF796) LA08_15835 PF05943 LA08_15835 LA08_15840 PF05591 LA08_15840 LA08_15860 PF01609 Transposase DDE domain LA08_15860 PF05598 LA08_15860 LA08_15865 PF13546 LA08_15865 LA08_15875 PF01610 LA08_15875 LA08_15875 PF13542 LA08_15875 LA08_15880 PF01609 Transposase DDE domain LA08_15880 PF05598 LA08_15880 LA08_15925 PF01106 NifU-like domain LA08_15930 PF01329 Pterin 4 alpha carbinolamine dehydratase LA08_15935 PF03544 Gram-negative bacterial TonB protein C-terminal LA08_15940 PF02535 LA08_15940 LA08_15950 PF11737 LA08_15950 LA08_15955 PF00849 RNA pseudouridylate synthase LA08_15955 PF01479 S4 domain LA08_15960 PF00575 S1 RNA binding domain LA08_15960 PF10150 Ribonuclease E/G family LA08_15980 PF00581 Rhodanese-like domain LA08_15985 PF01609 Transposase DDE domain LA08_15985 PF05598 LA08_15985 LA08_15995 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LA08_16000 PF03486 HI0933-like protein LA08_16005 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LA08_16005 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LA08_16005 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LA08_16015 PF01648 4'-phosphopantetheinyl transferase superfamily LA08_16025 PF01610 LA08_16025 LA08_16025 PF13542 LA08_16025 LA08_16040 PF10685 LA08_16040 LA08_16045 PF01609 Transposase DDE domain LA08_16045 PF05598 LA08_16045 LA08_16050 PF01609 Transposase DDE domain LA08_16050 PF05598 LA08_16050 LA08_16055 PF12760 Transposase zinc-ribbon domain LA08_16055 PF12762 LA08_16055 LA08_16065 PF12760 Transposase zinc-ribbon domain LA08_16065 PF12762 LA08_16065 LA08_16080 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LA08_16080 PF10414 Sirohaem synthase dimerisation region LA08_16080 PF13241 Putative NAD(P)-binding LA08_16080 PF14824 Sirohaem biosynthesis protein central LA08_16105 PF12804 MobA-like NTP transferase domain LA08_16110 PF00994 Probable molybdopterin binding domain LA08_16110 PF03453 MoeA N-terminal region (domain I and II) LA08_16110 PF03454 MoeA C-terminal region (domain IV) LA08_16140 PF01610 LA08_16140 LA08_16140 PF13542 LA08_16140 LA08_16155 PF13358 DDE superfamily endonuclease LA08_16155 PF13551 Winged helix-turn helix LA08_16155 PF13592 LA08_16155 LA08_16165 PF07944 Putative glycosyl hydrolase of unknown function (DUF1680) LA08_16180 PF00872 LA08_16180 LA08_16185 PF07715 TonB-dependent Receptor Plug Domain LA08_16190 PF07715 TonB-dependent Receptor Plug Domain LA08_16205 PF00326 Prolyl oligopeptidase family LA08_16205 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region LA08_16210 PF04616 Glycosyl hydrolases family 43 LA08_16215 PF00754 F5/8 type C domain LA08_16215 PF07532 LA08_16215 LA08_16220 PF00593 TonB dependent receptor LA08_16220 PF07715 TonB-dependent Receptor Plug Domain LA08_16230 PF00082 Subtilase family LA08_16230 PF09286 Pro-kumamolisin, activation domain LA08_16265 PF00326 Prolyl oligopeptidase family LA08_16265 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region LA08_16270 PF13520 Amino acid permease LA08_16275 PF05960 Bacterial protein of unknown function (DUF885) LA08_16280 PF05960 Bacterial protein of unknown function (DUF885) LA08_16285 PF00557 Metallopeptidase family M24 LA08_16285 PF01321 Creatinase/Prolidase N-terminal domain LA08_16290 PF00171 Aldehyde dehydrogenase family LA08_16295 PF00701 Dihydrodipicolinate synthetase family LA08_16300 PF07992 Pyridine nucleotide-disulphide oxidoreductase LA08_16305 PF13510 2Fe-2S iron-sulfur cluster binding domain LA08_16310 PF01266 FAD dependent oxidoreductase LA08_16315 PF05544 Proline racemase LA08_16320 PF08448 PAS fold LA08_16320 PF12833 Helix-turn-helix domain LA08_16325 PF00448 SRP54-type protein, GTPase domain LA08_16325 PF02881 SRP54-type protein, helical bundle domain LA08_16340 PF00633 Helix-hairpin-helix motif LA08_16340 PF00730 HhH-GPD superfamily base excision DNA repair protein LA08_16340 PF14815 NUDIX domain LA08_16345 PF04362 Bacterial Fe(2+) trafficking LA08_16350 PF00072 Response regulator receiver domain LA08_16350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA08_16350 PF13426 PAS domain LA08_16395 PF08843 Nucleotidyl transferase of unknown function (DUF1814) LA08_16400 PF13338 LA08_16400 LA08_16410 PF04703 FaeA-like protein LA08_16420 PF13358 DDE superfamily endonuclease LA08_16420 PF13551 Winged helix-turn helix LA08_16420 PF13592 LA08_16420 LA08_16440 PF08212 Lipocalin-like domain LA08_16455 PF13358 DDE superfamily endonuclease LA08_16455 PF13518 Helix-turn-helix domain LA08_16460 PF01963 LA08_16460 LA08_16465 PF06172 Cupin superfamily (DUF985) LA08_16470 PF03808 LA08_16470 LA08_16475 PF04230 LA08_16475 LA08_16485 PF13440 LA08_16485 LA08_16490 PF13692 Glycosyl transferases group 1 LA08_16495 PF00534 Glycosyl transferases group 1 LA08_16495 PF13439 Glycosyltransferase Family 4 LA08_16500 PF01757 LA08_16500 LA08_16505 PF01757 LA08_16505 LA08_16515 PF02397 LA08_16515 LA08_16515 PF13727 CoA-binding domain LA08_16520 PF02706 Chain length determinant protein LA08_16520 PF13807 LA08_16520 LA08_16525 PF02563 Polysaccharide biosynthesis/export protein LA08_16525 PF10531 SLBB domain LA08_16535 PF13411 MerR HTH family regulatory protein LA08_16540 PF00216 Bacterial DNA-binding protein LA08_16545 PF01588 Putative tRNA binding domain LA08_16545 PF03147 Ferredoxin-fold anticodon binding domain LA08_16545 PF03483 B3/4 domain LA08_16545 PF03484 tRNA synthetase B5 domain LA08_16550 PF01409 tRNA synthetases class II core domain (F) LA08_16550 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LA08_16555 PF00453 Ribosomal protein L20 LA08_16560 PF01632 Ribosomal protein L35 LA08_16565 PF00707 Translation initiation factor IF-3, C-terminal domain LA08_16565 PF05198 Translation initiation factor IF-3, N-terminal domain LA08_16570 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LA08_16570 PF02824 TGS domain LA08_16570 PF03129 Anticodon binding domain LA08_16570 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LA08_16600 PF00271 Helicase conserved C-terminal domain LA08_16600 PF02151 UvrB/uvrC motif LA08_16600 PF04851 Type III restriction enzyme, res subunit LA08_16600 PF12344 Ultra-violet resistance protein B LA08_16605 PF12019 Type II transport protein GspH LA08_16615 PF07963 Prokaryotic N-terminal methylation motif LA08_16615 PF16732 LA08_16615 LA08_16620 PF05567 Neisseria PilC beta-propeller domain LA08_16625 PF14341 LA08_16625 LA08_16630 PF07963 Prokaryotic N-terminal methylation motif LA08_16630 PF16074 LA08_16630 LA08_16635 PF07963 Prokaryotic N-terminal methylation motif LA08_16640 PF07963 Prokaryotic N-terminal methylation motif LA08_16640 PF12019 Type II transport protein GspH LA08_16645 PF03641 Possible lysine decarboxylase LA08_16645 PF11892 Domain of unknown function (DUF3412) LA08_16645 PF14793 Domain of unknown function (DUF4478) LA08_16650 PF07715 TonB-dependent Receptor Plug Domain LA08_16650 PF13620 Carboxypeptidase regulatory-like domain LA08_16660 PF01914 LA08_16660 LA08_16665 PF00106 short chain dehydrogenase LA08_16670 PF00462 Glutaredoxin LA08_16675 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LA08_16675 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LA08_16680 PF02222 ATP-grasp domain LA08_16685 PF00731 AIR carboxylase LA08_16690 PF03966 Trm112p-like protein LA08_16695 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LA08_16695 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LA08_16700 PF10030 LA08_16700 LA08_16705 PF00013 KH domain LA08_16705 PF00575 S1 RNA binding domain LA08_16705 PF01138 3' exoribonuclease family, domain 1 LA08_16705 PF03725 3' exoribonuclease family, domain 2 LA08_16705 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LA08_16710 PF00312 Ribosomal protein S15 LA08_16715 PF01509 TruB family pseudouridylate synthase (N terminal domain) LA08_16715 PF09157 Pseudouridine synthase II TruB, C-terminal LA08_16715 PF16198 LA08_16715 LA08_16720 PF02033 Ribosome-binding factor A LA08_16725 PF00009 Elongation factor Tu GTP binding domain LA08_16725 PF04760 Translation initiation factor IF-2, N-terminal region LA08_16725 PF08364 LA08_16725 LA08_16725 PF11987 Translation-initiation factor 2 LA08_16730 PF00575 S1 RNA binding domain LA08_16730 PF08529 NusA N-terminal domain LA08_16730 PF13184 NusA-like KH domain LA08_16730 PF14520 Helix-hairpin-helix domain LA08_16735 PF02576 Uncharacterised BCR, YhbC family COG0779 LA08_16735 PF17384 LA08_16735 LA08_16745 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains LA08_16750 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains LA08_16755 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains LA08_16755 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LA08_16760 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LA08_16765 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LA08_16770 PF12838 4Fe-4S dicluster domain LA08_16775 PF00146 NADH dehydrogenase LA08_16780 PF00384 Molybdopterin oxidoreductase LA08_16780 PF01568 Molydopterin dinucleotide binding domain LA08_16780 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LA08_16780 PF13510 2Fe-2S iron-sulfur cluster binding domain LA08_16785 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LA08_16785 PF10531 SLBB domain LA08_16785 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LA08_16790 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin LA08_16795 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LA08_16800 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LA08_16805 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LA08_16810 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LA08_16820 PF03840 Preprotein translocase SecG subunit LA08_16825 PF00121 Triosephosphate isomerase LA08_16830 PF00106 short chain dehydrogenase LA08_16840 PF01152 Bacterial-like globin LA08_16860 PF00563 EAL domain LA08_16860 PF00672 HAMP domain LA08_16860 PF00990 GGDEF domain LA08_16860 PF14827 Sensory domain of two-component sensor kinase LA08_16870 PF03171 2OG-Fe(II) oxygenase superfamily LA08_16870 PF14226 non-haem dioxygenase in morphine synthesis N-terminal LA08_16875 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LA08_16875 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LA08_16875 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LA08_16875 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LA08_16880 PF01039 Carboxyl transferase domain LA08_16885 PF00290 Tryptophan synthase alpha chain LA08_16895 PF00291 Pyridoxal-phosphate dependent enzyme LA08_16900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA08_16900 PF03466 LysR substrate binding domain LA08_16905 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LA08_16910 PF01416 tRNA pseudouridine synthase LA08_16930 PF01118 Semialdehyde dehydrogenase, NAD binding domain LA08_16930 PF02774 Semialdehyde dehydrogenase, dimerisation domain LA08_16935 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LA08_16935 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LA08_16940 PF01264 Chorismate synthase LA08_16945 PF05175 Methyltransferase small domain LA08_16950 PF02630 SCO1/SenC LA08_16955 PF02666 LA08_16955 LA08_16965 PF01464 Transglycosylase SLT domain LA08_16965 PF01476 LysM domain LA08_16990 PF01694 Rhomboid family LA08_17000 PF01272 Transcription elongation factor, GreA/GreB, C-term LA08_17000 PF03449 Transcription elongation factor, N-terminal LA08_17005 PF00919 Uncharacterized protein family UPF0004 LA08_17005 PF04055 Radical SAM superfamily LA08_17010 PF01738 Dienelactone hydrolase family LA08_17015 PF01230 HIT domain LA08_17035 PF00692 dUTPase LA08_17040 PF10609 ParA/MinD ATPase like LA08_17055 PF01431 Peptidase family M13 LA08_17055 PF05649 Peptidase family M13 LA08_17060 PF01694 Rhomboid family LA08_17065 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LA08_17075 PF12760 Transposase zinc-ribbon domain LA08_17075 PF12762 LA08_17075 LA08_17085 PF01266 FAD dependent oxidoreductase LA08_17090 PF04235 LA08_17090 LA08_17095 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LA08_17100 PF00877 NlpC/P60 family LA08_17105 PF00877 NlpC/P60 family LA08_17110 PF03061 Thioesterase superfamily LA08_17120 PF00375 Sodium:dicarboxylate symporter family LA08_17125 PF00245 Alkaline phosphatase LA08_17130 PF01171 PP-loop family LA08_17130 PF09179 TilS substrate binding domain LA08_17130 PF11734 TilS substrate C-terminal domain LA08_17135 PF02609 Exonuclease VII small subunit LA08_17140 PF00348 Polyprenyl synthetase LA08_17150 PF09685 LA08_17150 LA08_17165 PF01523 Putative modulator of DNA gyrase LA08_17170 PF04751 Protein of unknown function (DUF615) LA08_17175 PF01523 Putative modulator of DNA gyrase LA08_17185 PF13116 LA08_17185 LA08_17185 PF13502 LA08_17185 LA08_17190 PF00575 S1 RNA binding domain LA08_17190 PF10150 Ribonuclease E/G family LA08_17195 PF02545 Maf-like protein LA08_17200 PF04402 Protein of unknown function (DUF541) LA08_17210 PF00593 TonB dependent receptor LA08_17210 PF07715 TonB-dependent Receptor Plug Domain LA08_17210 PF13620 Carboxypeptidase regulatory-like domain LA08_17225 PF02590 Predicted SPOUT methyltransferase LA08_17235 PF05787 Bacterial protein of unknown function (DUF839) LA08_17245 PF02410 Oligomerisation domain LA08_17250 PF01467 Cytidylyltransferase LA08_17255 PF06144 DNA polymerase III, delta subunit LA08_17260 PF04390 Lipopolysaccharide-assembly LA08_17270 PF00133 tRNA synthetases class I (I, L, M and V) LA08_17270 PF08264 Anticodon-binding domain of tRNA LA08_17270 PF13603 Leucyl-tRNA synthetase, Domain 2 LA08_17275 PF06197 LA08_17275 LA08_17280 PF00085 Thioredoxin LA08_17280 PF14559 Tetratricopeptide repeat LA08_17280 PF14561 Tetratricopeptide repeat LA08_17285 PF14539 Domain of unknown function (DUF4442) LA08_17290 PF12760 Transposase zinc-ribbon domain LA08_17290 PF12762 LA08_17290 LA08_17310 PF04070 LA08_17310 LA08_17315 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LA08_17325 PF13546 LA08_17325 LA08_17330 PF01609 Transposase DDE domain LA08_17345 PF12760 Transposase zinc-ribbon domain LA08_17345 PF12762 LA08_17345 LA08_17355 PF00128 Alpha amylase, catalytic domain LA08_17355 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LA08_17360 PF01609 Transposase DDE domain LA08_17360 PF05598 LA08_17360 LA08_17365 PF01609 Transposase DDE domain LA08_17365 PF05598 LA08_17365 LA08_17375 PF12760 Transposase zinc-ribbon domain LA08_17375 PF12762 LA08_17375 LA08_17380 PF13936 Helix-turn-helix domain LA08_17400 PF00816 H-NS histone family LA08_17425 PF00589 Phage integrase family LA08_17445 PF00657 GDSL-like Lipase/Acylhydrolase LA08_17445 PF03797 Autotransporter beta-domain LA08_17450 PF02597 ThiS family LA08_17460 PF05690 Thiazole biosynthesis protein ThiG LA08_17470 PF02390 Putative methyltransferase LA08_17475 PF02080 TrkA-C domain LA08_17475 PF03600 Citrate transporter LA08_17480 PF00355 Rieske [2Fe-2S] domain LA08_17500 PF01557 Fumarylacetoacetate (FAA) hydrolase family LA08_17505 PF01741 Large-conductance mechanosensitive channel, MscL LA08_17530 PF00588 SpoU rRNA Methylase family LA08_17530 PF08032 RNA 2'-O ribose methyltransferase substrate binding LA08_17550 PF12760 Transposase zinc-ribbon domain LA08_17550 PF12762 LA08_17550 LA08_17560 PF01433 Peptidase family M1 LA08_17560 PF11838 ERAP1-like C-terminal domain LA08_17565 PF00873 AcrB/AcrD/AcrF family LA08_17570 PF16576 LA08_17570 LA08_17580 PF00009 Elongation factor Tu GTP binding domain LA08_17580 PF01583 Adenylylsulphate kinase LA08_17585 PF01507 Phosphoadenosine phosphosulfate reductase family LA08_17590 PF00175 Oxidoreductase NAD-binding domain LA08_17590 PF00258 Flavodoxin LA08_17590 PF00667 FAD binding domain LA08_17595 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LA08_17595 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LA08_17600 PF01507 Phosphoadenosine phosphosulfate reductase family LA08_17605 PF03929 LA08_17605 LA08_17610 PF00593 TonB dependent receptor LA08_17610 PF07715 TonB-dependent Receptor Plug Domain LA08_17615 PF11162 LA08_17615 LA08_17620 PF01590 GAF domain LA08_17620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA08_17645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA08_17645 PF03466 LysR substrate binding domain LA08_17650 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LA08_17650 PF13241 Putative NAD(P)-binding LA08_17655 PF00291 Pyridoxal-phosphate dependent enzyme LA08_17660 PF04191 Phospholipid methyltransferase LA08_17665 PF01661 Macro domain LA08_17670 PF00274 Fructose-bisphosphate aldolase class-I LA08_17675 PF00224 Pyruvate kinase, barrel domain LA08_17675 PF02887 Pyruvate kinase, alpha/beta domain LA08_17680 PF13419 Haloacid dehalogenase-like hydrolase LA08_17685 PF00162 Phosphoglycerate kinase LA08_17695 PF13163 LA08_17695 LA08_17700 PF10101 LA08_17700 LA08_17720 PF00199 Catalase LA08_17720 PF06628 Catalase-related immune-responsive LA08_17745 PF01609 Transposase DDE domain LA08_17745 PF05598 LA08_17745 LA08_17755 PF13358 DDE superfamily endonuclease LA08_17755 PF13551 Winged helix-turn helix LA08_17755 PF13592 LA08_17755 LA08_17765 PF08448 PAS fold LA08_17765 PF12833 Helix-turn-helix domain LA08_17795 PF00326 Prolyl oligopeptidase family LA08_17795 PF07676 WD40-like Beta Propeller Repeat LA08_17805 PF13557 LA08_17805 LA08_17820 PF01609 Transposase DDE domain LA08_17820 PF05598 LA08_17820 LA08_17825 PF03169 LA08_17825 LA08_17830 PF13365 Trypsin-like peptidase domain LA08_17835 PF08668 HDOD domain LA08_17845 PF02811 PHP domain LA08_17845 PF07733 Bacterial DNA polymerase III alpha subunit LA08_17845 PF14579 Helix-hairpin-helix motif LA08_17855 PF00817 impB/mucB/samB family LA08_17865 PF00717 Peptidase S24-like LA08_17865 PF01726 LexA DNA binding domain LA08_17870 PF04014 Antidote-toxin recognition MazE LA08_17875 PF02661 Fic/DOC family LA08_17895 PF00300 Histidine phosphatase superfamily (branch 1) LA08_17900 PF00440 Bacterial regulatory proteins, tetR family LA08_17920 PF00069 Protein kinase domain LA08_17930 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LA08_17930 PF04851 Type III restriction enzyme, res subunit LA08_17930 PF11867 LA08_17930 LA08_17935 PF01609 Transposase DDE domain LA08_17935 PF05598 LA08_17935 LA08_17945 PF14355 LA08_17945 LA08_17955 PF01609 Transposase DDE domain LA08_17955 PF05598 LA08_17955 LA08_17965 PF08780 Nucleotidyltransferase substrate binding protein like LA08_17970 PF02384 N-6 DNA Methylase LA08_17970 PF12161 HsdM N-terminal domain LA08_17975 PF04471 Restriction endonuclease LA08_17980 PF05016 Plasmid stabilisation system protein LA08_17990 PF00271 Helicase conserved C-terminal domain LA08_17990 PF04851 Type III restriction enzyme, res subunit LA08_17990 PF08463 LA08_17990 LA08_17990 PF13643 LA08_17990 LA08_17995 PF07751 LA08_17995 LA08_18000 PF02384 N-6 DNA Methylase LA08_18000 PF12161 HsdM N-terminal domain LA08_18010 PF01420 Type I restriction modification DNA specificity domain LA08_18015 PF05016 Plasmid stabilisation system protein LA08_18035 PF05954 Phage late control gene D protein (GPD) LA08_18055 PF00665 Integrase core domain LA08_18055 PF13936 Helix-turn-helix domain LA08_18105 PF13503 LA08_18105 LA08_18110 PF05954 Phage late control gene D protein (GPD) LA08_18110 PF10106 LA08_18110 LA08_18110 PF13296 LA08_18110 LA08_18120 PF00004 ATPase family associated with various cellular activities (AAA) LA08_18120 PF02861 Clp amino terminal domain LA08_18120 PF07724 AAA domain (Cdc48 subfamily) LA08_18120 PF10431 C-terminal, D2-small domain, of ClpB protein LA08_18125 PF06996 LA08_18125 LA08_18130 PF05947 LA08_18130 LA08_18135 PF04965 Gene 25-like lysozyme LA08_18140 PF05638 Protein of unknown function (DUF796) LA08_18145 PF05943 LA08_18145 LA08_18150 PF05591 LA08_18150 LA08_18160 PF12790 Type VI secretion lipoprotein LA08_18165 PF05936 LA08_18165 LA08_18170 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) LA08_18175 PF05954 Phage late control gene D protein (GPD) LA08_18175 PF10106 LA08_18175 LA08_18175 PF13296 LA08_18175 LA08_18185 PF05954 Phage late control gene D protein (GPD) LA08_18185 PF10106 LA08_18185 LA08_18185 PF13296 LA08_18185 LA08_18195 PF01609 Transposase DDE domain LA08_18195 PF05598 LA08_18195 LA08_18210 PF10106 LA08_18210 LA08_18215 PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) LA08_18220 PF11745 LA08_18220 LA08_18225 PF11745 LA08_18225 LA08_18235 PF11745 LA08_18235 LA08_18240 PF11745 LA08_18240 LA08_18245 PF13503 LA08_18245 LA08_18250 PF05954 Phage late control gene D protein (GPD) LA08_18250 PF10106 LA08_18250 LA08_18250 PF13296 LA08_18250 LA08_18260 PF06812 LA08_18260 LA08_18265 PF00691 OmpA family LA08_18270 PF09867 Uncharacterized protein conserved in bacteria (DUF2094) LA08_18275 PF06744 LA08_18275 LA08_18275 PF06761 LA08_18275 LA08_18275 PF14331 LA08_18275 LA08_18285 PF05488 PAAR motif LA08_18290 PF13539 D-alanyl-D-alanine carboxypeptidase LA08_18305 PF02222 ATP-grasp domain LA08_18320 PF03869 Arc-like DNA binding domain LA08_18325 PF02557 D-alanyl-D-alanine carboxypeptidase LA08_18330 PF00730 HhH-GPD superfamily base excision DNA repair protein LA08_18335 PF04241 LA08_18335 LA08_18340 PF10604 Polyketide cyclase / dehydrase and lipid transport LA08_18345 PF00072 Response regulator receiver domain LA08_18345 PF00196 Bacterial regulatory proteins, luxR family LA08_18350 PF07730 Histidine kinase LA08_18360 PF00583 Acetyltransferase (GNAT) family LA08_18365 PF03775 Septum formation inhibitor MinC, C-terminal domain LA08_18365 PF05209 Septum formation inhibitor MinC, N-terminal domain LA08_18370 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LA08_18375 PF03776 Septum formation topological specificity factor MinE LA08_18385 PF00512 His Kinase A (phospho-acceptor) domain LA08_18385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA08_18390 PF00072 Response regulator receiver domain LA08_18390 PF00486 Transcriptional regulatory protein, C terminal LA08_18395 PF13231 LA08_18395 LA08_18400 PF01569 PAP2 superfamily LA08_18405 PF00884 Sulfatase LA08_18405 PF08019 LA08_18405 LA08_18410 PF01401 Angiotensin-converting enzyme LA08_18425 PF00005 ABC transporter LA08_18425 PF00664 ABC transporter transmembrane region LA08_18425 PF03412 Peptidase C39 family LA08_18430 PF13437 HlyD family secretion protein LA08_18430 PF13533 Biotin-lipoyl like LA08_18435 PF13469 Sulfotransferase family LA08_18445 PF02347 Glycine cleavage system P-protein LA08_18460 PF08774 VRR-NUC domain LA08_18465 PF11876 LA08_18465 LA08_18470 PF11876 LA08_18470 LA08_18485 PF13936 Helix-turn-helix domain LA08_18495 PF13358 DDE superfamily endonuclease LA08_18495 PF13551 Winged helix-turn helix LA08_18495 PF13592 LA08_18495 LA08_18500 PF01196 Ribosomal protein L17 LA08_18505 PF01000 RNA polymerase Rpb3/RpoA insert domain LA08_18505 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LA08_18505 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LA08_18510 PF00163 Ribosomal protein S4/S9 N-terminal domain LA08_18510 PF01479 S4 domain LA08_18515 PF00411 Ribosomal protein S11 LA08_18520 PF00416 Ribosomal protein S13/S18 LA08_18525 PF00344 SecY translocase LA08_18530 PF00828 Ribosomal protein L18e/L15 LA08_18535 PF00327 Ribosomal protein L30p/L7e LA08_18540 PF00333 Ribosomal protein S5, N-terminal domain LA08_18540 PF03719 Ribosomal protein S5, C-terminal domain LA08_18545 PF00861 Ribosomal L18p/L5e family LA08_18550 PF00347 Ribosomal protein L6 LA08_18555 PF00410 Ribosomal protein S8 LA08_18560 PF00253 Ribosomal protein S14p/S29e LA08_18565 PF00281 Ribosomal protein L5 LA08_18565 PF00673 ribosomal L5P family C-terminus LA08_18570 PF00467 KOW motif LA08_18570 PF17136 LA08_18570 LA08_18575 PF00238 Ribosomal protein L14p/L23e LA08_18580 PF00366 Ribosomal protein S17 LA08_18585 PF00831 Ribosomal L29 protein LA08_18590 PF00252 Ribosomal protein L16p/L10e LA08_18595 PF00189 Ribosomal protein S3, C-terminal domain LA08_18595 PF07650 KH domain LA08_18600 PF00237 Ribosomal protein L22p/L17e LA08_18605 PF00203 Ribosomal protein S19 LA08_18610 PF00181 Ribosomal Proteins L2, RNA binding domain LA08_18610 PF03947 Ribosomal Proteins L2, C-terminal domain LA08_18615 PF00276 Ribosomal protein L23 LA08_18620 PF00573 Ribosomal protein L4/L1 family LA08_18625 PF00297 Ribosomal protein L3 LA08_18630 PF00338 Ribosomal protein S10p/S20e LA08_18640 PF00009 Elongation factor Tu GTP binding domain LA08_18640 PF03143 Elongation factor Tu C-terminal domain LA08_18640 PF03144 Elongation factor Tu domain 2 LA08_18645 PF00009 Elongation factor Tu GTP binding domain LA08_18645 PF00679 Elongation factor G C-terminus LA08_18645 PF03144 Elongation factor Tu domain 2 LA08_18645 PF03764 Elongation factor G, domain IV LA08_18645 PF14492 Elongation Factor G, domain II LA08_18650 PF00177 Ribosomal protein S7p/S5e LA08_18655 PF00164 Ribosomal protein S12/S23 LA08_18660 PF00623 RNA polymerase Rpb1, domain 2 LA08_18660 PF04983 RNA polymerase Rpb1, domain 3 LA08_18660 PF04997 RNA polymerase Rpb1, domain 1 LA08_18660 PF04998 RNA polymerase Rpb1, domain 5 LA08_18660 PF05000 RNA polymerase Rpb1, domain 4 LA08_18665 PF00562 RNA polymerase Rpb2, domain 6 LA08_18665 PF04560 RNA polymerase Rpb2, domain 7 LA08_18665 PF04561 RNA polymerase Rpb2, domain 2 LA08_18665 PF04563 RNA polymerase beta subunit LA08_18665 PF04565 RNA polymerase Rpb2, domain 3 LA08_18665 PF10385 RNA polymerase beta subunit external 1 domain LA08_18670 PF00542 Ribosomal protein L7/L12 C-terminal domain LA08_18670 PF16320 LA08_18670 LA08_18675 PF00466 Ribosomal protein L10 LA08_18680 PF00687 Ribosomal protein L1p/L10e family LA08_18685 PF00298 Ribosomal protein L11, RNA binding domain LA08_18685 PF03946 Ribosomal protein L11, N-terminal domain LA08_18695 PF00467 KOW motif LA08_18695 PF02357 Transcription termination factor nusG LA08_18700 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LA08_18710 PF00009 Elongation factor Tu GTP binding domain LA08_18710 PF03143 Elongation factor Tu C-terminal domain LA08_18710 PF03144 Elongation factor Tu domain 2 LA08_18730 PF01926 50S ribosome-binding GTPase LA08_18730 PF06071 Protein of unknown function (DUF933) LA08_18735 PF01195 Peptidyl-tRNA hydrolase LA08_18740 PF01386 Ribosomal L25p family LA08_18740 PF14693 Ribosomal protein TL5, C-terminal domain LA08_18745 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LA08_18745 PF14572 Phosphoribosyl synthetase-associated domain LA08_18755 PF00288 GHMP kinases N terminal domain LA08_18755 PF08544 GHMP kinases C terminal LA08_18760 PF03550 Outer membrane lipoprotein LolB LA08_18765 PF13429 Tetratricopeptide repeat LA08_18770 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LA08_18770 PF01488 Shikimate / quinate 5-dehydrogenase LA08_18770 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LA08_18775 PF00472 RF-1 domain LA08_18775 PF03462 PCRF domain LA08_18780 PF13844 Glycosyl transferase family 41 LA08_18780 PF14559 Tetratricopeptide repeat LA08_18785 PF00994 Probable molybdopterin binding domain LA08_18790 PF03976 Polyphosphate kinase 2 (PPK2) LA08_18800 PF00708 Acylphosphatase LA08_18805 PF00578 AhpC/TSA family LA08_18810 PF03631 LA08_18810 LA08_18815 PF03358 NADPH-dependent FMN reductase LA08_18820 PF09842 LA08_18820 LA08_18830 PF02055 O-Glycosyl hydrolase family 30 LA08_18830 PF17189 LA08_18830 LA08_18835 PF00710 Asparaginase LA08_18840 PF04073 Aminoacyl-tRNA editing domain LA08_18850 PF01063 Aminotransferase class IV LA08_18855 PF01883 Domain of unknown function DUF59 LA08_18880 PF02233 NAD(P) transhydrogenase beta subunit LA08_18885 PF12769 Domain of unknown function (DUF3814) LA08_18890 PF04542 Sigma-70 region 2 LA08_18890 PF08281 Sigma-70, region 4 LA08_18900 PF11304 LA08_18900 LA08_18905 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LA08_18905 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LA08_18910 PF07793 LA08_18910 LA08_18915 PF00881 Nitroreductase family LA08_18920 PF01367 5'-3' exonuclease, C-terminal SAM fold LA08_18920 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LA08_18925 PF00293 NUDIX domain LA08_18930 PF05013 N-formylglutamate amidohydrolase LA08_18935 PF00561 alpha/beta hydrolase fold LA08_18965 PF00665 Integrase core domain LA08_18965 PF13936 Helix-turn-helix domain LA08_18970 PF05175 Methyltransferase small domain LA08_18975 PF00578 AhpC/TSA family LA08_18975 PF10417 C-terminal domain of 1-Cys peroxiredoxin LA08_18980 PF07992 Pyridine nucleotide-disulphide oxidoreductase LA08_18980 PF13192 Thioredoxin domain LA08_18985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA08_18985 PF03466 LysR substrate binding domain LA08_18995 PF01272 Transcription elongation factor, GreA/GreB, C-term LA08_18995 PF14760 Rnk N-terminus LA08_19000 PF00923 Transaldolase LA08_19025 PF01965 DJ-1/PfpI family LA08_19035 PF01625 Peptide methionine sulfoxide reductase LA08_19040 PF08332 Calcium/calmodulin dependent protein kinase II Association LA08_19065 PF02627 Carboxymuconolactone decarboxylase family LA08_19070 PF00462 Glutaredoxin LA08_19075 PF01435 Peptidase family M48 LA08_19080 PF00072 Response regulator receiver domain LA08_19080 PF00486 Transcriptional regulatory protein, C terminal LA08_19085 PF00512 His Kinase A (phospho-acceptor) domain LA08_19085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA08_19085 PF11808 LA08_19085 LA08_19090 PF02503 Polyphosphate kinase middle domain LA08_19090 PF13089 Polyphosphate kinase N-terminal domain LA08_19090 PF13090 Polyphosphate kinase C-terminal domain LA08_19095 PF02541 Ppx/GppA phosphatase family LA08_19100 PF00534 Glycosyl transferases group 1 LA08_19100 PF13439 Glycosyltransferase Family 4 LA08_19105 PF01569 PAP2 superfamily LA08_19110 PF00149 Calcineurin-like phosphoesterase LA08_19130 PF04305 LA08_19130 LA08_19135 PF13522 Glutamine amidotransferase domain LA08_19140 PF02674 LA08_19140 LA08_19145 PF05036 Sporulation related domain LA08_19150 PF08245 Mur ligase middle domain LA08_19160 PF00300 Histidine phosphatase superfamily (branch 1) LA08_19165 PF10459 Peptidase S46 LA08_19175 PF00593 TonB dependent receptor LA08_19175 PF07715 TonB-dependent Receptor Plug Domain LA08_19185 PF00107 Zinc-binding dehydrogenase LA08_19185 PF08240 Alcohol dehydrogenase GroES-like domain LA08_19190 PF09694 LA08_19190 LA08_19195 PF00005 ABC transporter LA08_19195 PF12857 LA08_19195 LA08_19200 PF00528 Binding-protein-dependent transport system inner membrane component LA08_19205 PF00528 Binding-protein-dependent transport system inner membrane component LA08_19210 PF13531 Bacterial extracellular solute-binding protein LA08_19215 PF00155 Aminotransferase class I and II LA08_19225 PF00849 RNA pseudouridylate synthase LA08_19225 PF01479 S4 domain LA08_19235 PF00691 OmpA family LA08_19235 PF13505 Outer membrane protein beta-barrel domain LA08_19245 PF08240 Alcohol dehydrogenase GroES-like domain LA08_19245 PF13602 Zinc-binding dehydrogenase LA08_19250 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LA08_19250 PF07992 Pyridine nucleotide-disulphide oxidoreductase LA08_19295 PF00072 Response regulator receiver domain LA08_19295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA08_19300 PF00072 Response regulator receiver domain LA08_19305 PF09413 Domain of unknown function (DUF2007) LA08_19310 PF13409 Glutathione S-transferase, N-terminal domain LA08_19320 PF00749 tRNA synthetases class I (E and Q), catalytic domain LA08_19320 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LA08_19340 PF13936 Helix-turn-helix domain LA08_19370 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LA08_19375 PF01728 FtsJ-like methyltransferase LA08_19380 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LA08_19385 PF08450 SMP-30/Gluconolaconase/LRE-like region LA08_19395 PF13202 EF hand LA08_19400 PF12802 MarR family LA08_19405 PF00378 Enoyl-CoA hydratase/isomerase family LA08_19410 PF00171 Aldehyde dehydrogenase family LA08_19415 PF00501 AMP-binding enzyme LA08_19415 PF13193 AMP-binding enzyme C-terminal domain LA08_19420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA08_19420 PF03466 LysR substrate binding domain LA08_19430 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LA08_19445 PF12760 Transposase zinc-ribbon domain LA08_19445 PF12762 LA08_19445 LA08_19460 PF01494 FAD binding domain LA08_19465 PF01494 FAD binding domain LA08_19475 PF01923 Cobalamin adenosyltransferase LA08_19480 PF00850 Histone deacetylase domain LA08_19485 PF03968 OstA-like protein LA08_19485 PF04453 Organic solvent tolerance protein LA08_19490 PF00639 PPIC-type PPIASE domain LA08_19490 PF09312 SurA N-terminal domain LA08_19490 PF13616 PPIC-type PPIASE domain LA08_19495 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LA08_19505 PF00398 Ribosomal RNA adenine dimethylase LA08_19510 PF04379 Protein of unknown function (DUF525) LA08_19515 PF00149 Calcineurin-like phosphoesterase LA08_19520 PF00186 Dihydrofolate reductase LA08_19530 PF00303 Thymidylate synthase LA08_19535 PF01790 LA08_19535 LA08_19540 PF04536 TLP18 LA08_19545 PF04536 TLP18 LA08_19550 PF04011 LemA family LA08_19555 PF01219 Prokaryotic diacylglycerol kinase LA08_19565 PF01609 Transposase DDE domain LA08_19580 PF00512 His Kinase A (phospho-acceptor) domain LA08_19580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA08_19585 PF00072 Response regulator receiver domain LA08_19585 PF00486 Transcriptional regulatory protein, C terminal LA08_19590 PF13472 GDSL-like Lipase/Acylhydrolase family LA08_19595 PF00005 ABC transporter LA08_19600 PF02687 LA08_19600 LA08_19605 PF02668 Taurine catabolism dioxygenase TauD, TfdA family LA08_19615 PF00005 ABC transporter LA08_19625 PF04342 LA08_19625 LA08_19650 PF10636 Hemin uptake protein hemP LA08_19655 PF00248 Aldo/keto reductase family LA08_19665 PF01773 Na+ dependent nucleoside transporter N-terminus LA08_19665 PF07662 Na+ dependent nucleoside transporter C-terminus LA08_19665 PF07670 Nucleoside recognition LA08_19670 PF00294 pfkB family carbohydrate kinase LA08_19685 PF08306 Glycosyl hydrolase family 98 LA08_19685 PF08307 Glycosyl hydrolase family 98 C-terminal domain LA08_19685 PF16990 LA08_19685 LA08_19690 PF01207 Dihydrouridine synthase (Dus) LA08_19705 PF00438 S-adenosylmethionine synthetase, N-terminal domain LA08_19705 PF02772 S-adenosylmethionine synthetase, central domain LA08_19705 PF02773 S-adenosylmethionine synthetase, C-terminal domain LA08_19715 PF00328 Histidine phosphatase superfamily (branch 2) LA08_19720 PF00593 TonB dependent receptor LA08_19720 PF07715 TonB-dependent Receptor Plug Domain LA08_19735 PF13546 LA08_19735 LA08_19745 PF00440 Bacterial regulatory proteins, tetR family LA08_19750 PF00311 Phosphoenolpyruvate carboxylase LA08_19755 PF00326 Prolyl oligopeptidase family LA08_19760 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LA08_19760 PF05221 S-adenosyl-L-homocysteine hydrolase LA08_19765 PF13649 Methyltransferase domain LA08_19770 PF00685 Sulfotransferase domain LA08_19780 PF11539 Protein of unknown function (DUF3228) LA08_19785 PF09831 LA08_19785 LA08_19800 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LA08_19815 PF00082 Subtilase family LA08_19820 PF08240 Alcohol dehydrogenase GroES-like domain LA08_19820 PF13602 Zinc-binding dehydrogenase LA08_19830 PF02836 Glycosyl hydrolases family 2, TIM barrel domain LA08_19835 PF02219 Methylenetetrahydrofolate reductase LA08_19850 PF00293 NUDIX domain LA08_19850 PF02581 Thiamine monophosphate synthase/TENI LA08_19860 PF01043 SecA preprotein cross-linking domain LA08_19860 PF02810 SEC-C motif LA08_19860 PF07516 SecA Wing and Scaffold domain LA08_19860 PF07517 SecA DEAD-like domain LA08_19865 PF01551 Peptidase family M23 LA08_19870 PF05258 LA08_19870 LA08_19875 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LA08_19880 PF00091 Tubulin/FtsZ family, GTPase domain LA08_19880 PF12327 FtsZ family, C-terminal domain LA08_19885 PF02491 SHS2 domain inserted in FTSA LA08_19885 PF14450 Cell division protein FtsA LA08_19890 PF03799 Cell division protein FtsQ LA08_19890 PF08478 POTRA domain, FtsQ-type LA08_19895 PF01820 D-ala D-ala ligase N-terminus LA08_19895 PF07478 D-ala D-ala ligase C-terminus LA08_19900 PF01225 Mur ligase family, catalytic domain LA08_19900 PF02875 Mur ligase family, glutamate ligase domain LA08_19900 PF08245 Mur ligase middle domain LA08_19905 PF03033 Glycosyltransferase family 28 N-terminal domain LA08_19905 PF04101 Glycosyltransferase family 28 C-terminal domain LA08_19910 PF01098 LA08_19910 LA08_19915 PF00953 Glycosyl transferase family 4 LA08_19920 PF01225 Mur ligase family, catalytic domain LA08_19920 PF02875 Mur ligase family, glutamate ligase domain LA08_19920 PF08245 Mur ligase middle domain LA08_19925 PF01225 Mur ligase family, catalytic domain LA08_19925 PF02875 Mur ligase family, glutamate ligase domain LA08_19925 PF08245 Mur ligase middle domain LA08_19930 PF00905 Penicillin binding protein transpeptidase domain LA08_19930 PF03717 Penicillin-binding Protein dimerisation domain LA08_19935 PF04999 LA08_19935 LA08_19940 PF01795 MraW methylase family LA08_19945 PF02381 MraZ protein LA08_19950 PF05742 LA08_19950 LA08_19965 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LA08_19970 PF04348 LppC putative lipoprotein LA08_19975 PF02021 Uncharacterised protein family UPF0102 LA08_19980 PF04307 LA08_19980 LA08_19985 PF01565 FAD binding domain LA08_19985 PF02913 FAD linked oxidases, C-terminal domain LA08_19990 PF00072 Response regulator receiver domain LA08_19990 PF00486 Transcriptional regulatory protein, C terminal LA08_19995 PF00512 His Kinase A (phospho-acceptor) domain LA08_19995 PF00582 Universal stress protein family LA08_19995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA08_19995 PF02702 Osmosensitive K+ channel His kinase sensor domain LA08_19995 PF13493 Domain of unknown function (DUF4118) LA08_20000 PF02669 LA08_20000 LA08_20005 PF00122 E1-E2 ATPase LA08_20005 PF00702 haloacid dehalogenase-like hydrolase LA08_20010 PF03814 LA08_20010 LA08_20015 PF09604 LA08_20015 LA08_20035 PF00586 AIR synthase related protein, N-terminal domain LA08_20035 PF02769 AIR synthase related protein, C-terminal domain LA08_20040 PF01029 NusB family LA08_20045 PF00885 6,7-dimethyl-8-ribityllumazine synthase LA08_20050 PF00925 GTP cyclohydrolase II LA08_20050 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LA08_20055 PF00677 Lumazine binding domain LA08_20065 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LA08_20065 PF01872 RibD C-terminal domain LA08_20070 PF13673 Acetyltransferase (GNAT) domain LA08_20075 PF03477 ATP cone domain LA08_20085 PF00464 Serine hydroxymethyltransferase LA08_20090 PF00593 TonB dependent receptor LA08_20090 PF07715 TonB-dependent Receptor Plug Domain LA08_20100 PF11776 Domain of unknown function (DUF3315) LA08_20105 PF00005 ABC transporter LA08_20105 PF12848 ABC transporter LA08_20115 PF14329 LA08_20115 LA08_20120 PF14329 LA08_20120 LA08_20125 PF00756 Putative esterase LA08_20135 PF00107 Zinc-binding dehydrogenase LA08_20135 PF08240 Alcohol dehydrogenase GroES-like domain LA08_20140 PF02583 Metal-sensitive transcriptional repressor LA08_20145 PF00534 Glycosyl transferases group 1 LA08_20150 PF00072 Response regulator receiver domain LA08_20150 PF00486 Transcriptional regulatory protein, C terminal LA08_20155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA08_20185 PF04107 Glutamate-cysteine ligase family 2(GCS2) LA08_20185 PF13546 LA08_20185 LA08_20195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA08_20200 PF04107 Glutamate-cysteine ligase family 2(GCS2) LA08_20205 PF01988 LA08_20205 LA08_20215 PF01926 50S ribosome-binding GTPase LA08_20220 PF00034 Cytochrome c LA08_20225 PF13462 Thioredoxin LA08_20230 PF01323 DSBA-like thioredoxin domain LA08_20235 PF03372 Endonuclease/Exonuclease/phosphatase family LA08_20250 PF01609 Transposase DDE domain LA08_20250 PF05598 LA08_20250 LA08_20255 PF00291 Pyridoxal-phosphate dependent enzyme LA08_20255 PF01053 Cys/Met metabolism PLP-dependent enzyme LA08_20270 PF01609 Transposase DDE domain LA08_20270 PF05598 LA08_20270 LA08_20280 PF01527 Transposase LA08_20310 PF01743 Poly A polymerase head domain LA08_20310 PF01966 HD domain LA08_20310 PF12627 Probable RNA and SrmB- binding site of polymerase A LA08_20315 PF12760 Transposase zinc-ribbon domain LA08_20315 PF12762 LA08_20315 LA08_20320 PF13936 Helix-turn-helix domain LA08_20325 PF01609 Transposase DDE domain LA08_20325 PF05598 LA08_20325 LA08_20370 PF14559 Tetratricopeptide repeat LA08_20375 PF01522 Polysaccharide deacetylase LA08_20375 PF14883 Hypothetical glycosyl hydrolase family 13 LA08_20380 PF13641 Glycosyltransferase like family 2 LA08_20385 PF13994 LA08_20385 LA08_20390 PF01979 Amidohydrolase family LA08_20395 PF01380 SIS domain LA08_20400 PF00356 Bacterial regulatory proteins, lacI family LA08_20400 PF13377 Periplasmic binding protein-like domain LA08_20405 PF07690 Major Facilitator Superfamily LA08_20410 PF00392 Bacterial regulatory proteins, gntR family LA08_20410 PF07702 UTRA domain LA08_20415 PF07786 LA08_20415 LA08_20425 PF00703 Glycosyl hydrolases family 2 LA08_20425 PF02836 Glycosyl hydrolases family 2, TIM barrel domain LA08_20425 PF02837 Glycosyl hydrolases family 2, sugar binding domain LA08_20425 PF16355 LA08_20425 LA08_20430 PF00593 TonB dependent receptor LA08_20430 PF07715 TonB-dependent Receptor Plug Domain LA08_20435 PF13936 Helix-turn-helix domain LA08_20450 PF01610 LA08_20450 LA08_20450 PF13542 LA08_20450 LA08_20470 PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase LA08_20475 PF13561 Enoyl-(Acyl carrier protein) reductase LA08_20480 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LA08_20485 PF00072 Response regulator receiver domain LA08_20485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA08_20490 PF00072 Response regulator receiver domain LA08_20495 PF00512 His Kinase A (phospho-acceptor) domain LA08_20495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA08_20495 PF05227 CHASE3 domain LA08_20495 PF13188 PAS domain LA08_20500 PF04972 BON domain LA08_20505 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LA08_20505 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LA08_20510 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LA08_20510 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LA08_20520 PF05433 LA08_20520 LA08_20525 PF10001 LA08_20525 LA08_20540 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LA08_20545 PF00293 NUDIX domain LA08_20545 PF01467 Cytidylyltransferase LA08_20550 PF03372 Endonuclease/Exonuclease/phosphatase family LA08_20555 PF00595 PDZ domain (Also known as DHR or GLGF) LA08_20555 PF03572 Peptidase family S41 LA08_20555 PF11818 LA08_20555 LA08_20565 PF07669 Eco57I restriction-modification methylase LA08_20570 PF04055 Radical SAM superfamily LA08_20570 PF16881 LA08_20570 LA08_20575 PF03099 Biotin/lipoate A/B protein ligase family LA08_20580 PF04359 Protein of unknown function (DUF493) LA08_20595 PF00768 D-alanyl-D-alanine carboxypeptidase LA08_20595 PF07943 Penicillin-binding protein 5, C-terminal domain LA08_20605 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel LA08_20605 PF05036 Sporulation related domain LA08_20610 PF13406 Transglycosylase SLT domain LA08_20625 PF01476 LysM domain LA08_20625 PF11860 LA08_20625 LA08_20635 PF12760 Transposase zinc-ribbon domain LA08_20635 PF12762 LA08_20635 LA08_20645 PF15584 LA08_20645 LA08_20645 PF15602 LA08_20645 LA08_20655 PF05954 Phage late control gene D protein (GPD) LA08_20655 PF10106 LA08_20655 LA08_20670 PF01098 LA08_20670 LA08_20675 PF00905 Penicillin binding protein transpeptidase domain LA08_20675 PF03717 Penicillin-binding Protein dimerisation domain LA08_20680 PF04093 LA08_20680 LA08_20685 PF04085 rod shape-determining protein MreC LA08_20690 PF06723 MreB/Mbl protein LA08_20695 PF00294 pfkB family carbohydrate kinase LA08_20710 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LA08_20715 PF13673 Acetyltransferase (GNAT) domain LA08_20725 PF16576 LA08_20725 LA08_20735 PF01209 ubiE/COQ5 methyltransferase family LA08_20740 PF00990 GGDEF domain LA08_20745 PF01433 Peptidase family M1 LA08_20745 PF09127 Leukotriene A4 hydrolase, C-terminal LA08_20755 PF00702 haloacid dehalogenase-like hydrolase LA08_20760 PF00004 ATPase family associated with various cellular activities (AAA) LA08_20760 PF07724 AAA domain (Cdc48 subfamily) LA08_20760 PF10431 C-terminal, D2-small domain, of ClpB protein LA08_20765 PF00227 Proteasome subunit LA08_20775 PF00589 Phage integrase family LA08_20775 PF02899 Phage integrase, N-terminal SAM-like domain LA08_20780 PF04340 Protein of unknown function, DUF484 LA08_20785 PF01678 Diaminopimelate epimerase LA08_20790 PF13627 LA08_20790 LA08_20795 PF04304 LA08_20795 LA08_20800 PF00326 Prolyl oligopeptidase family LA08_20800 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LA08_20805 PF00155 Aminotransferase class I and II LA08_20820 PF00326 Prolyl oligopeptidase family LA08_20820 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LA08_20830 PF08212 Lipocalin-like domain LA08_20835 PF08279 HTH domain LA08_20835 PF13280 LA08_20835 LA08_20840 PF04338 Protein of unknown function, DUF481 LA08_20845 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LA08_20845 PF03900 Porphobilinogen deaminase, C-terminal domain LA08_20850 PF00072 Response regulator receiver domain LA08_20850 PF04397 LytTr DNA-binding domain LA08_20855 PF06580 LA08_20855 LA08_20860 PF02230 Phospholipase/Carboxylesterase LA08_20865 PF13632 Glycosyl transferase family group 2 LA08_20890 PF02225 PA domain LA08_20890 PF04389 Peptidase family M28 LA08_20900 PF00916 LA08_20900 LA08_20900 PF01740 STAS domain LA08_20905 PF00150 Cellulase (glycosyl hydrolase family 5) LA08_20905 PF00553 Cellulose binding domain LA08_20920 PF00990 GGDEF domain LA08_20920 PF01590 GAF domain LA08_20920 PF08447 PAS fold LA08_20920 PF08448 PAS fold LA08_20925 PF00675 Insulinase (Peptidase family M16) LA08_20925 PF05193 Peptidase M16 inactive domain LA08_20930 PF01590 GAF domain LA08_20950 PF01904 Protein of unknown function DUF72 LA08_20960 PF01204 Trehalase LA08_20965 PF01382 Avidin family LA08_20980 PF01544 CorA-like Mg2+ transporter protein LA08_20990 PF00324 Amino acid permease LA08_21000 PF01341 Glycosyl hydrolases family 6 LA08_21005 PF00150 Cellulase (glycosyl hydrolase family 5) LA08_21010 PF00892 EamA-like transporter family LA08_21015 PF05430 S-adenosyl-L-methionine-dependent methyltransferase LA08_21030 PF07759 LA08_21030 LA08_21040 PF00326 Prolyl oligopeptidase family LA08_21040 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region LA08_21050 PF00326 Prolyl oligopeptidase family LA08_21070 PF00106 short chain dehydrogenase LA08_21070 PF13561 Enoyl-(Acyl carrier protein) reductase LA08_21085 PF01212 Beta-eliminating lyase LA08_21090 PF00425 chorismate binding enzyme LA08_21090 PF04715 Anthranilate synthase component I, N terminal region LA08_21095 PF00781 Diacylglycerol kinase catalytic domain LA08_21100 PF00583 Acetyltransferase (GNAT) family LA08_21105 PF00834 Ribulose-phosphate 3 epimerase family LA08_21110 PF00226 DnaJ domain LA08_21115 PF01259 SAICAR synthetase LA08_21135 PF13358 DDE superfamily endonuclease LA08_21135 PF13551 Winged helix-turn helix LA08_21135 PF13592 LA08_21135 LA08_21155 PF06127 LA08_21155 LA08_21165 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains LA08_21165 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LA08_21165 PF04039 LA08_21165 LA08_21165 PF13244 LA08_21165 LA08_21170 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LA08_21175 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains LA08_21180 PF01899 LA08_21180 LA08_21185 PF04066 LA08_21185 LA08_21190 PF03334 LA08_21190 LA08_21200 PF04209 homogentisate 1,2-dioxygenase LA08_21205 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LA08_21205 PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal LA08_21210 PF12802 MarR family LA08_21215 PF13899 Thioredoxin-like LA08_21220 PF00854 POT family LA08_21225 PF03301 Tryptophan 2,3-dioxygenase LA08_21235 PF00676 Dehydrogenase E1 component LA08_21245 PF12760 Transposase zinc-ribbon domain LA08_21245 PF12762 LA08_21245 LA08_21255 PF07653 Variant SH3 domain LA08_21270 PF00108 Thiolase, N-terminal domain LA08_21270 PF02803 Thiolase, C-terminal domain LA08_21280 PF07219 LA08_21280 LA08_21285 PF04375 LA08_21285 LA08_21290 PF02602 Uroporphyrinogen-III synthase HemD LA08_21295 PF01755 LA08_21295 LA08_21315 PF13546 LA08_21315 LA08_21325 PF01609 Transposase DDE domain LA08_21325 PF05598 LA08_21325 LA08_21330 PF13419 Haloacid dehalogenase-like hydrolase LA08_21335 PF13202 EF hand LA08_21340 PF13202 EF hand LA08_21350 PF14255 LA08_21350 LA08_21355 PF01427 D-ala-D-ala dipeptidase LA08_21360 PF01510 N-acetylmuramoyl-L-alanine amidase LA08_21365 PF00877 NlpC/P60 family LA08_21365 PF12913 SH3 domain of the SH3b1 type LA08_21365 PF12914 SH3 domain of SH3b2 type LA08_21370 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LA08_21370 PF13378 Enolase C-terminal domain-like LA08_21390 PF12760 Transposase zinc-ribbon domain LA08_21390 PF12762 LA08_21390 LA08_21410 PF13520 Amino acid permease LA08_21420 PF01610 LA08_21420 LA08_21420 PF13542 LA08_21420 LA08_21445 PF05360 LA08_21445 LA08_21450 PF07995 Glucose / Sorbosone dehydrogenase LA08_21465 PF12760 Transposase zinc-ribbon domain LA08_21465 PF12762 LA08_21465 LA08_21485 PF00933 Glycosyl hydrolase family 3 N terminal domain LA08_21485 PF01915 Glycosyl hydrolase family 3 C-terminal domain LA08_21485 PF14310 Fibronectin type III-like domain LA08_21490 PF02152 Dihydroneopterin aldolase LA08_21495 PF00814 Glycoprotease family LA08_21500 PF01165 Ribosomal protein S21 LA08_21505 PF09424 Yqey-like protein LA08_21520 PF03631 LA08_21520 LA08_21525 PF01807 CHC2 zinc finger LA08_21525 PF08275 DNA primase catalytic core, N-terminal domain LA08_21525 PF08278 DNA primase DnaG DnaB-binding LA08_21525 PF10410 DnaB-helicase binding domain of primase LA08_21525 PF13155 Toprim-like LA08_21545 PF13593 SBF-like CPA transporter family (DUF4137) LA08_21550 PF13899 Thioredoxin-like LA08_21560 PF01040 UbiA prenyltransferase family LA08_21565 PF02628 LA08_21565 LA08_21575 PF02104 LA08_21575 LA08_21580 PF11137 LA08_21580 LA08_21585 PF00510 Cytochrome c oxidase subunit III LA08_21590 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 LA08_21600 PF00115 Cytochrome C and Quinol oxidase polypeptide I LA08_21605 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LA08_21605 PF02790 Cytochrome C oxidase subunit II, transmembrane domain LA08_21610 PF10003 LA08_21610 LA08_21615 PF00171 Aldehyde dehydrogenase family LA08_21615 PF01619 Proline dehydrogenase LA08_21615 PF14850 DNA-binding domain of Proline dehydrogenase LA08_21625 PF12760 Transposase zinc-ribbon domain LA08_21625 PF12762 LA08_21625 LA08_21630 PF00210 Ferritin-like domain LA08_21635 PF04324 BFD-like [2Fe-2S] binding domain LA08_21640 PF00293 NUDIX domain LA08_21655 PF00380 Ribosomal protein S9/S16 LA08_21660 PF00572 Ribosomal protein L13 LA08_21665 PF03232 LA08_21665 LA08_21670 PF00893 Small Multidrug Resistance protein LA08_21675 PF02675 S-adenosylmethionine decarboxylase LA08_21680 PF00027 Cyclic nucleotide-binding domain LA08_21680 PF00325 Bacterial regulatory proteins, crp family LA08_21685 PF12710 haloacid dehalogenase-like hydrolase LA08_21690 PF00218 Indole-3-glycerol phosphate synthase LA08_21695 PF00591 Glycosyl transferase family, a/b domain LA08_21695 PF02885 Glycosyl transferase family, helical bundle domain LA08_21700 PF01613 Flavin reductase like domain LA08_21710 PF00117 Glutamine amidotransferase class-I LA08_21735 PF03971 Monomeric isocitrate dehydrogenase LA08_21745 PF01609 Transposase DDE domain LA08_21745 PF05598 LA08_21745 LA08_21775 PF01609 Transposase DDE domain LA08_21775 PF05598 LA08_21775 LA08_21785 PF00665 Integrase core domain LA08_21785 PF13936 Helix-turn-helix domain LA08_21790 PF00872 LA08_21790 LA08_21805 PF14489 QueF-like protein LA08_21805 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term LA08_21815 PF01546 Peptidase family M20/M25/M40 LA08_21815 PF07687 Peptidase dimerisation domain LA08_21820 PF16576 LA08_21820 LA08_21825 PF00873 AcrB/AcrD/AcrF family LA08_21830 PF00873 AcrB/AcrD/AcrF family LA08_21840 PF07063 Domain of unknown function (DUF1338) LA08_21855 PF12760 Transposase zinc-ribbon domain LA08_21855 PF12762 LA08_21855 LA08_21865 PF12760 Transposase zinc-ribbon domain LA08_21865 PF12762 LA08_21865 LA08_21870 PF09500 Putative thioesterase (yiiD_Cterm) LA08_21880 PF00581 Rhodanese-like domain LA08_21885 PF02556 Preprotein translocase subunit SecB LA08_21890 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LA08_21890 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LA08_21900 PF00205 Thiamine pyrophosphate enzyme, central domain LA08_21900 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LA08_21900 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LA08_21905 PF00512 His Kinase A (phospho-acceptor) domain LA08_21905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA08_21910 PF00072 Response regulator receiver domain LA08_21910 PF00158 Sigma-54 interaction domain LA08_21910 PF02954 Bacterial regulatory protein, Fis family LA08_21925 PF07690 Major Facilitator Superfamily LA08_21930 PF00588 SpoU rRNA Methylase family LA08_21940 PF13698 LA08_21940 LA08_21945 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LA08_21945 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LA08_21950 PF02661 Fic/DOC family LA08_21950 PF13784 Fic/DOC family N-terminal LA08_21955 PF01555 DNA methylase LA08_21960 PF04851 Type III restriction enzyme, res subunit LA08_21965 PF00561 alpha/beta hydrolase fold LA08_21970 PF03692 LA08_21970 LA08_21975 PF00501 AMP-binding enzyme LA08_21980 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family LA08_21985 PF07043 LA08_21985 LA08_21990 PF01609 Transposase DDE domain LA08_21990 PF05598 LA08_21990 LA08_21995 PF12802 MarR family LA08_22005 PF11871 LA08_22005 LA08_22005 PF13487 HD domain LA08_22010 PF07690 Major Facilitator Superfamily LA08_22020 PF12760 Transposase zinc-ribbon domain LA08_22020 PF12762 LA08_22020 LA08_22030 PF13358 DDE superfamily endonuclease LA08_22030 PF13551 Winged helix-turn helix LA08_22030 PF13592 LA08_22030 LA08_22035 PF00132 Bacterial transferase hexapeptide (six repeats) LA08_22045 PF00920 Dehydratase family LA08_22050 PF00589 Phage integrase family LA08_22050 PF13495 Phage integrase, N-terminal SAM-like domain LA08_22070 PF01609 Transposase DDE domain LA08_22070 PF05598 LA08_22070 LA08_22080 PF01218 Coproporphyrinogen III oxidase LA08_22095 PF00476 DNA polymerase family A LA08_22095 PF01367 5'-3' exonuclease, C-terminal SAM fold LA08_22095 PF01612 3'-5' exonuclease LA08_22095 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LA08_22100 PF11191 Protein of unknown function (DUF2782) LA08_22115 PF00456 Transketolase, thiamine diphosphate binding domain LA08_22130 PF03377 Xanthomonas avirulence protein, Avr/PthA LA08_22145 PF13276 LA08_22145 LA08_22160 PF00672 HAMP domain LA08_22160 PF02743 Cache domain LA08_22160 PF07228 Stage II sporulation protein E (SpoIIE) LA08_22165 PF13581 Histidine kinase-like ATPase domain LA08_22170 PF13466 STAS domain LA08_22180 PF04264 YceI-like domain LA08_22185 PF00881 Nitroreductase family LA08_22190 PF06258 LA08_22190 LA08_22195 PF09916 LA08_22195 LA08_22210 PF02592 LA08_22210 LA08_22215 PF03710 Glutamate-ammonia ligase adenylyltransferase LA08_22215 PF08335 GlnD PII-uridylyltransferase LA08_22225 PF08450 SMP-30/Gluconolaconase/LRE-like region LA08_22250 PF12760 Transposase zinc-ribbon domain LA08_22250 PF12762 LA08_22250 LA08_22265 PF00793 DAHP synthetase I family LA08_22275 PF00593 TonB dependent receptor LA08_22280 PF07715 TonB-dependent Receptor Plug Domain LA08_22290 PF00118 TCP-1/cpn60 chaperonin family LA08_22295 PF00166 Chaperonin 10 Kd subunit LA08_22305 PF01936 NYN domain LA08_22305 PF12872 OST-HTH/LOTUS domain LA08_22315 PF07992 Pyridine nucleotide-disulphide oxidoreductase LA08_22325 PF00140 Sigma-70 factor, region 1 LA08_22325 PF04542 Sigma-70 region 2 LA08_22325 PF04545 Sigma-70, region 4 LA08_22330 PF03167 Uracil DNA glycosylase superfamily LA08_22335 PF00072 Response regulator receiver domain LA08_22345 PF00005 ABC transporter LA08_22350 PF00270 DEAD/DEAH box helicase LA08_22350 PF00271 Helicase conserved C-terminal domain LA08_22350 PF12300 LA08_22350 LA08_22355 PF00085 Thioredoxin LA08_22360 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LA08_22360 PF07497 Rho termination factor, RNA-binding domain LA08_22360 PF07498 Rho termination factor, N-terminal domain LA08_22375 PF01103 Surface antigen LA08_22375 PF07244 Surface antigen variable number repeat LA08_22375 PF17243 LA08_22375 LA08_22380 PF04357 LA08_22380 LA08_22400 PF03176 MMPL family LA08_22410 PF03279 LA08_22410 LA08_22415 PF07977 FabA-like domain LA08_22420 PF01553 Acyltransferase LA08_22430 PF00550 Phosphopantetheine attachment site LA08_22435 PF01494 FAD binding domain LA08_22445 PF06189 LA08_22445 LA08_22450 PF00501 AMP-binding enzyme LA08_22460 PF00326 Prolyl oligopeptidase family LA08_22460 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region LA08_22485 PF04191 Phospholipid methyltransferase LA08_22490 PF01638 HxlR-like helix-turn-helix LA08_22495 PF05368 NmrA-like family LA08_22510 PF03812 LA08_22510 LA08_22515 PF01717 Cobalamin-independent synthase, Catalytic domain LA08_22520 PF08908 LA08_22520 LA08_22525 PF03358 NADPH-dependent FMN reductase LA08_22530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA08_22530 PF03466 LysR substrate binding domain LA08_22535 PF02677 LA08_22535 LA08_22545 PF02219 Methylenetetrahydrofolate reductase LA08_22555 PF00072 Response regulator receiver domain LA08_22555 PF00486 Transcriptional regulatory protein, C terminal LA08_22560 PF00551 Formyl transferase LA08_22560 PF01842 ACT domain LA08_22580 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LA08_22580 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LA08_22585 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LA08_22590 PF02146 Sir2 family LA08_22600 PF07690 Major Facilitator Superfamily LA08_22605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA08_22605 PF03466 LysR substrate binding domain LA08_22625 PF01026 TatD related DNase LA08_22640 PF00326 Prolyl oligopeptidase family LA08_22645 PF00561 alpha/beta hydrolase fold LA08_22650 PF12760 Transposase zinc-ribbon domain LA08_22650 PF12762 LA08_22650 LA08_22665 PF13358 DDE superfamily endonuclease LA08_22665 PF13551 Winged helix-turn helix LA08_22665 PF13592 LA08_22665 LA08_22675 PF00266 Aminotransferase class-V LA08_22680 PF01522 Polysaccharide deacetylase LA08_22685 PF11533 Protein of unknown function (DUF3225) LA08_22690 PF09349 OHCU decarboxylase LA08_22700 PF13546 LA08_22700 LA08_22740 PF00326 Prolyl oligopeptidase family LA08_22745 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain LA08_22745 PF00364 Biotin-requiring enzyme LA08_22745 PF02785 Biotin carboxylase C-terminal domain LA08_22745 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LA08_22750 PF01039 Carboxyl transferase domain LA08_22755 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LA08_22755 PF02770 Acyl-CoA dehydrogenase, middle domain LA08_22755 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LA08_22760 PF00440 Bacterial regulatory proteins, tetR family LA08_22775 PF11804 LA08_22775 LA08_22785 PF12365 LA08_22785 LA08_22795 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LA08_22805 PF03203 LA08_22805 LA08_22810 PF02492 CobW/HypB/UreG, nucleotide-binding domain LA08_22810 PF07683 Cobalamin synthesis protein cobW C-terminal domain LA08_22825 PF12146 Putative lysophospholipase LA08_22830 PF03969 AFG1-like ATPase LA08_22845 PF00593 TonB dependent receptor LA08_22845 PF07715 TonB-dependent Receptor Plug Domain LA08_22850 PF13469 Sulfotransferase family LA08_22855 PF02092 LA08_22855 LA08_22855 PF05746 DALR anticodon binding domain LA08_22860 PF02091 Glycyl-tRNA synthetase alpha subunit LA08_22865 PF00437 Type II/IV secretion system protein LA08_22865 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LA08_22890 PF00117 Glutamine amidotransferase class-I LA08_22900 PF00902 Sec-independent protein translocase protein (TatC) LA08_22905 PF02416 mttA/Hcf106 family LA08_22910 PF02416 mttA/Hcf106 family LA08_22915 PF04366 LA08_22915 LA08_22920 PF00762 Ferrochelatase LA08_22925 PF00561 alpha/beta hydrolase fold LA08_22940 PF01863 Protein of unknown function DUF45 LA08_22950 PF04381 Putative exonuclease, RdgC LA08_22955 PF01171 PP-loop family LA08_22970 PF00356 Bacterial regulatory proteins, lacI family LA08_22970 PF13377 Periplasmic binding protein-like domain LA08_22975 PF03648 Glycosyl hydrolase family 67 N-terminus LA08_22975 PF07477 Glycosyl hydrolase family 67 C-terminus LA08_22975 PF07488 Glycosyl hydrolase family 67 middle domain LA08_22980 PF02837 Glycosyl hydrolases family 2, sugar binding domain LA08_22980 PF03629 Domain of unknown function (DUF303) LA08_22985 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LA08_22985 PF13378 Enolase C-terminal domain-like LA08_22990 PF04616 Glycosyl hydrolases family 43 LA08_22995 PF00933 Glycosyl hydrolase family 3 N terminal domain LA08_22995 PF01915 Glycosyl hydrolase family 3 C-terminal domain LA08_22995 PF07691 PA14 domain LA08_22995 PF14310 Fibronectin type III-like domain LA08_23000 PF01232 Mannitol dehydrogenase Rossmann domain LA08_23000 PF08125 Mannitol dehydrogenase C-terminal domain LA08_23020 PF02614 Glucuronate isomerase LA08_23025 PF00331 Glycosyl hydrolase family 10 LA08_23040 PF07690 Major Facilitator Superfamily LA08_23045 PF00593 TonB dependent receptor LA08_23045 PF07715 TonB-dependent Receptor Plug Domain LA08_23050 PF13347 MFS/sugar transport protein LA08_23055 PF04616 Glycosyl hydrolases family 43 LA08_23080 PF12760 Transposase zinc-ribbon domain LA08_23080 PF12762 LA08_23080 LA08_23095 PF00563 EAL domain LA08_23100 PF00487 LA08_23100 LA08_23105 PF00111 2Fe-2S iron-sulfur cluster binding domain LA08_23105 PF00175 Oxidoreductase NAD-binding domain LA08_23105 PF00970 Oxidoreductase FAD-binding domain LA08_23110 PF00440 Bacterial regulatory proteins, tetR family LA08_23120 PF13546 LA08_23120 LA08_23130 PF00665 Integrase core domain LA08_23130 PF13936 Helix-turn-helix domain LA08_23145 PF01047 MarR family LA08_23150 PF02566 OsmC-like protein LA08_23155 PF11101 LA08_23155 LA08_23185 PF13560 Helix-turn-helix domain LA08_23190 PF15579 LA08_23190 LA08_23195 PF15648 LA08_23195 LA08_23210 PF05488 PAAR motif LA08_23235 PF01156 Inosine-uridine preferring nucleoside hydrolase LA08_23245 PF01381 Helix-turn-helix LA08_23250 PF05015 Plasmid maintenance system killer protein LA08_23255 PF13245 Part of AAA domain LA08_23255 PF13538 UvrD-like helicase C-terminal domain LA08_23260 PF00580 UvrD/REP helicase N-terminal domain LA08_23260 PF12705 PD-(D/E)XK nuclease superfamily LA08_23260 PF13361 UvrD-like helicase C-terminal domain LA08_23265 PF04257 Exodeoxyribonuclease V, gamma subunit LA08_23280 PF07484 Phage Tail Collar Domain LA08_23285 PF07484 Phage Tail Collar Domain LA08_23290 PF07484 Phage Tail Collar Domain LA08_23295 PF12760 Transposase zinc-ribbon domain LA08_23295 PF12762 LA08_23295 LA08_23305 PF00080 Copper/zinc superoxide dismutase (SODC) LA08_23310 PF00080 Copper/zinc superoxide dismutase (SODC) LA08_23315 PF00072 Response regulator receiver domain LA08_23315 PF00158 Sigma-54 interaction domain LA08_23315 PF02954 Bacterial regulatory protein, Fis family LA08_23320 PF00512 His Kinase A (phospho-acceptor) domain LA08_23320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA08_23325 PF00909 Ammonium Transporter Family LA08_23330 PF00543 Nitrogen regulatory protein P-II LA08_23335 PF00120 Glutamine synthetase, catalytic domain LA08_23335 PF03951 Glutamine synthetase, beta-Grasp domain LA08_23340 PF02673 LA08_23340 LA08_23345 PF03724 META domain LA08_23345 PF14302 LA08_23345 LA08_23355 PF01161 Phosphatidylethanolamine-binding protein LA08_23360 PF13432 Tetratricopeptide repeat LA08_23370 PF12697 Alpha/beta hydrolase family LA08_23375 PF01553 Acyltransferase LA08_23380 PF03061 Thioesterase superfamily LA08_23385 PF13091 PLD-like domain LA08_23390 PF04264 YceI-like domain LA08_23395 PF00300 Histidine phosphatase superfamily (branch 1) LA08_23400 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LA08_23405 PF03547 LA08_23405 LA08_23415 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase LA08_23420 PF13560 Helix-turn-helix domain LA08_23425 PF07804 HipA-like C-terminal domain LA08_23425 PF13657 HipA N-terminal domain LA08_23430 PF10017 LA08_23430 LA08_23435 PF03781 Sulfatase-modifying factor enzyme 1 LA08_23435 PF12867 DinB superfamily LA08_23440 PF00266 Aminotransferase class-V LA08_23445 PF00528 Binding-protein-dependent transport system inner membrane component LA08_23445 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LA08_23450 PF00005 ABC transporter LA08_23455 PF13202 EF hand LA08_23460 PF00487 LA08_23460 LA08_23465 PF00005 ABC transporter LA08_23475 PF01734 Patatin-like phospholipase LA08_23490 PF01609 Transposase DDE domain LA08_23490 PF05598 LA08_23490 LA08_23515 PF00248 Aldo/keto reductase family LA08_23520 PF00107 Zinc-binding dehydrogenase LA08_23520 PF16884 LA08_23520 LA08_23525 PF00248 Aldo/keto reductase family LA08_23535 PF00849 RNA pseudouridylate synthase LA08_23550 PF00271 Helicase conserved C-terminal domain LA08_23550 PF04408 Helicase associated domain (HA2) LA08_23550 PF08482 LA08_23550 LA08_23555 PF07308 LA08_23555 LA08_23560 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LA08_23560 PF13378 Enolase C-terminal domain-like LA08_23570 PF01557 Fumarylacetoacetate (FAA) hydrolase family LA08_23575 PF13561 Enoyl-(Acyl carrier protein) reductase LA08_23580 PF04909 Amidohydrolase LA08_23585 PF00248 Aldo/keto reductase family LA08_23595 PF04616 Glycosyl hydrolases family 43 LA08_23620 PF00072 Response regulator receiver domain LA08_23620 PF00196 Bacterial regulatory proteins, luxR family LA08_23625 PF00501 AMP-binding enzyme LA08_23625 PF13193 AMP-binding enzyme C-terminal domain LA08_23625 PF16177 LA08_23625 LA08_23640 PF04341 LA08_23640 LA08_23645 PF00474 Sodium:solute symporter family LA08_23655 PF00480 ROK family LA08_23660 PF03372 Endonuclease/Exonuclease/phosphatase family LA08_23665 PF04828 Glutathione-dependent formaldehyde-activating enzyme LA08_23670 PF04226 LA08_23670 LA08_23675 PF01648 4'-phosphopantetheinyl transferase superfamily LA08_23680 PF09423 PhoD-like phosphatase LA08_23680 PF16655 LA08_23680 LA08_23685 PF09423 PhoD-like phosphatase LA08_23685 PF16655 LA08_23685 LA08_23690 PF02527 rRNA small subunit methyltransferase G LA08_23705 PF00830 Ribosomal L28 family LA08_23710 PF00471 Ribosomal protein L33 LA08_23715 PF04909 Amidohydrolase LA08_23720 PF01610 LA08_23720 LA08_23720 PF13542 LA08_23720 LA08_23735 PF04303 PrpF protein LA08_23740 PF03737 Demethylmenaquinone methyltransferase LA08_23745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA08_23745 PF03466 LysR substrate binding domain LA08_23750 PF13091 PLD-like domain LA08_23750 PF13396 LA08_23750 LA08_23760 PF13454 FAD-NAD(P)-binding LA08_23770 PF00580 UvrD/REP helicase N-terminal domain LA08_23770 PF13361 UvrD-like helicase C-terminal domain LA08_23775 PF12760 Transposase zinc-ribbon domain LA08_23775 PF12762 LA08_23775 LA08_23780 PF12760 Transposase zinc-ribbon domain LA08_23780 PF12762 LA08_23780 LA08_23785 PF13520 Amino acid permease LA08_23795 PF02646 LA08_23795 LA08_23795 PF13602 Zinc-binding dehydrogenase LA08_23805 PF00255 Glutathione peroxidase LA08_23825 PF04055 Radical SAM superfamily LA08_23835 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) LA08_23840 PF01694 Rhomboid family LA08_23845 PF08850 LA08_23845 LA08_23850 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LA08_23850 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LA08_23860 PF03572 Peptidase family S41 LA08_23860 PF13180 PDZ domain LA08_23865 PF01551 Peptidase family M23 LA08_23875 PF02225 PA domain LA08_23875 PF04389 Peptidase family M28 LA08_23880 PF13670 LA08_23880 LA08_23890 PF13546 LA08_23890 LA08_23900 PF09983 LA08_23900 LA08_23900 PF11795 LA08_23900 LA08_23905 PF13555 P-loop containing region of AAA domain LA08_23905 PF13558 Putative exonuclease SbcCD, C subunit LA08_23910 PF13835 LA08_23910 LA08_23915 PF11855 LA08_23915 LA08_23920 PF14103 LA08_23920 LA08_23925 PF13304 AAA domain LA08_23930 PF01227 GTP cyclohydrolase I LA08_23935 PF12802 MarR family LA08_23945 PF02321 Outer membrane efflux protein LA08_23950 PF04632 LA08_23950 LA08_23955 PF00083 Sugar (and other) transporter LA08_23960 PF13376 LA08_23960 LA08_23975 PF05016 Plasmid stabilisation system protein LA08_24000 PF15579 LA08_24000 LA08_24005 PF15648 LA08_24005 LA08_24015 PF13503 LA08_24015 LA08_24020 PF05488 PAAR motif LA08_24055 PF02595 Glycerate kinase family LA08_24060 PF07690 Major Facilitator Superfamily LA08_24075 PF10672 S-adenosylmethionine-dependent methyltransferase LA08_24085 PF03741 LA08_24085 LA08_24090 PF01694 Rhomboid family LA08_24095 PF03009 Glycerophosphoryl diester phosphodiesterase family LA08_24105 PF01569 PAP2 superfamily LA08_24110 PF01926 50S ribosome-binding GTPase LA08_24110 PF10396 GTP-binding protein TrmE N-terminus LA08_24110 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE LA08_24115 PF00656 Caspase domain LA08_24115 PF01522 Polysaccharide deacetylase LA08_24115 PF13432 Tetratricopeptide repeat LA08_24120 PF02096 60Kd inner membrane protein LA08_24120 PF14849 YidC periplasmic domain LA08_24125 PF00825 Ribonuclease P LA08_24130 PF00468 Ribosomal protein L34