locus-tag	class	description
BO992_00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
BO992_00020	COG0187	DNA topoisomerase II activity
BO992_00030	COG0501	Belongs to the peptidase M48B family
BO992_00070	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BO992_00090	COG4772	TonB-dependent receptor
BO992_00105	COG3039	Transposase
BO992_00115	COG1755	Isoprenylcysteine carboxyl methyltransferase
BO992_00135	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BO992_00150	COG3039	Transposase
BO992_00160	COG1136	(ABC) transporter
BO992_00180	COG0508	dehydrogenase complex catalyzes the overall conversion of
BO992_00200	COG3039	Transposase
BO992_00210	COG0513	Belongs to the DEAD box helicase family
BO992_00290	COG1858	cytochrome C peroxidase
BO992_00300	COG0702	epimerase
BO992_00325	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
BO992_00340	COG0745	RESPONSE REGULATOR receiver
BO992_00340	COG3706	GGDEF domain
BO992_00350	COG2354	Protein conserved in bacteria
BO992_00355	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
BO992_00365	COG3293	Transposase
BO992_00375	COG3264	Mechanosensitive ion channel
BO992_00375	COG1511	domain protein
BO992_00455	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
BO992_00530	COG3039	Transposase
BO992_00540	COG3039	Transposase
BO992_00575	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BO992_00585	COG0642	Histidine kinase
BO992_00590	COG1090	epimerase
BO992_00600	COG3039	Transposase
BO992_00625	COG2826	transposase and inactivated derivatives, IS30 family
BO992_00685	COG1136	(ABC) transporter
BO992_00725	COG1272	protein, Hemolysin III
BO992_00730	COG1205	dead DEAH box helicase
BO992_00730	COG1111	helicase
BO992_00785	COG0067	glutamate synthase
BO992_00785	COG0069	glutamate synthase activity
BO992_00785	COG0070	glutamate synthase
BO992_00790	COG0493	'glutamate synthase
BO992_00830	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
BO992_00835	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
BO992_00840	COG1609	Transcriptional regulator
BO992_00865	COG0366	Alpha amylase catalytic
BO992_00870	COG0366	Alpha amylase catalytic
BO992_00875	COG2801	Transposase and inactivated derivatives
BO992_00890	COG3328	transposase activity
BO992_00920	COG0606	chelatase, subunit chli
BO992_00960	COG1166	arginine decarboxylase activity
BO992_00970	COG3501	Rhs element vgr protein
BO992_01035	COG1028	Short-chain dehydrogenase reductase Sdr
BO992_01060	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
BO992_01075	COG0210	DNA helicase
BO992_01090	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
BO992_01125	COG2937	Belongs to the GPAT DAPAT family
BO992_01160	COG2755	lipolytic protein G-D-S-L family
BO992_01170	COG3186	Phenylalanine-4-hydroxylase
BO992_01175	COG1522	sequence-specific DNA binding
BO992_01190	COG4773	Receptor
BO992_01195	COG2826	transposase and inactivated derivatives, IS30 family
BO992_01230	COG1064	alcohol dehydrogenase
BO992_01235	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
BO992_01240	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
BO992_01250	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
BO992_01275	COG3039	Transposase
BO992_01280	COG0676	glucose-6-phosphate 1-epimerase activity
BO992_01300	COG3135	benzoate transporter
BO992_01305	COG3135	benzoate transporter
BO992_01360	COG3293	Transposase
BO992_01380	COG2853	Lipoprotein
BO992_01395	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
BO992_01400	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
BO992_01405	COG1127	ABC transporter
BO992_01435	COG3293	Transposase
BO992_01465	COG2801	Transposase and inactivated derivatives
BO992_01470	COG2963	transposase activity
BO992_01490	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BO992_01500	COG3293	Transposase
BO992_01510	COG3265	gluconokinase activity
BO992_01515	COG2211	Major facilitator Superfamily
BO992_01520	COG3459	Glycosyltransferase 36 associated
BO992_01535	COG2205	protein histidine kinase activity
BO992_01545	COG1414	Transcriptional regulator
BO992_01550	COG0738	Major facilitator superfamily
BO992_01555	COG3254	rhamnose metabolic process
BO992_01580	COG0339	signal peptide processing
BO992_01605	COG0564	pseudouridine synthase activity
BO992_01665	COG3293	Transposase
BO992_01670	COG2963	transposase activity
BO992_01715	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
BO992_01725	COG0842	Transport permease protein
BO992_01730	COG1131	(ABC) transporter
BO992_01735	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
BO992_01755	COG1476	TRANSCRIPTIONal
BO992_01765	COG4555	ABC transporter
BO992_01800	COG3293	Transposase
BO992_01810	COG0625	glutathione transferase activity
BO992_01855	COG0583	DNA-binding transcription factor activity
BO992_01890	COG1199	ATP-dependent helicase activity
BO992_01910	COG1566	PFAM secretion protein HlyD family protein
BO992_01935	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BO992_01945	COG0745	RESPONSE REGULATOR receiver
BO992_01950	COG2205	protein histidine kinase activity
BO992_01975	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
BO992_01975	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
BO992_02030	COG3237	CsbD-like
BO992_02035	COG0180	Tryptophanyl-tRNA synthetase
BO992_02040	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BO992_02090	COG0753	catalase activity
BO992_02095	COG1595	DNA-templated transcription, initiation
BO992_02105	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
BO992_02115	COG0628	permease
BO992_02130	COG1040	competence protein
BO992_02150	COG1028	Short-chain dehydrogenase reductase Sdr
BO992_02165	COG0463	Glycosyl transferase, family 2
BO992_02175	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BO992_02180	COG3100	YcgL domain-containing protein
BO992_02195	COG3387	PFAM Glycoside hydrolase 15-related
BO992_02205	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
BO992_02220	COG2239	Acts as a magnesium transporter
BO992_02230	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BO992_02230	COG1042	CoA-binding domain protein
BO992_02230	COG0045	succinate-CoA ligase (ADP-forming) activity
BO992_02240	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BO992_02245	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BO992_02270	COG2801	Transposase and inactivated derivatives
BO992_02285	COG3485	protocatechuate 3,4-dioxygenase
BO992_02290	COG3485	protocatechuate 3,4-dioxygenase
BO992_02305	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
BO992_02310	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BO992_02325	COG1414	Transcriptional regulator
BO992_02340	COG4221	oxidoreductase activity
BO992_02365	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
BO992_02390	COG0463	Glycosyl transferase, family 2
BO992_02405	COG1475	DNA binding
BO992_02410	COG1192	Involved in chromosome partitioning
BO992_02425	COG0708	Exodeoxyribonuclease III
BO992_02430	COG2211	Major facilitator Superfamily
BO992_02445	COG0739	heme binding
BO992_02535	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
BO992_02555	COG2814	Major facilitator Superfamily
BO992_02570	COG1289	transmembrane transporter activity
BO992_02580	COG0577	efflux transmembrane transporter activity
BO992_02580	COG1136	(ABC) transporter
BO992_02585	COG0151	Belongs to the GarS family
BO992_02605	COG2267	carboxylic ester hydrolase activity
BO992_02615	COG2267	carboxylic ester hydrolase activity
BO992_02620	COG2453	phosphatase
BO992_02620	COG0671	phosphoesterase, PA-phosphatase related
BO992_02630	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
BO992_02670	COG0439	Biotin carboxylase
BO992_02680	COG0511	ligase activity, forming carbon-carbon bonds
BO992_02700	COG1324	tolerance protein
BO992_02725	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
BO992_02750	COG0534	Mate efflux family protein
BO992_02755	COG0616	signal peptide processing
BO992_02765	COG1028	Short-chain dehydrogenase reductase Sdr
BO992_02785	COG1754	DNA topoisomerase type I activity
BO992_02785	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BO992_02805	COG0758	DNA mediated transformation
BO992_02810	COG1652	LysM domain
BO992_02815	COG0242	peptide deformylase activity
BO992_02825	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
BO992_02825	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
BO992_02875	COG1560	Kdo2-lipid A biosynthetic process
BO992_02885	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
BO992_03030	COG1294	oxidase, subunit
BO992_03035	COG1271	oxidase subunit
BO992_03040	COG2204	response regulator
BO992_03075	COG2972	Histidine kinase
BO992_03080	COG3279	Response regulator of the LytR AlgR family
BO992_03085	COG3279	Response regulator of the LytR AlgR family
BO992_03095	COG0531	amino acid
BO992_03115	COG3590	peptidase
BO992_03130	COG0667	Aldo Keto reductase
BO992_03145	COG3384	dioxygenase
BO992_03155	COG1573	uracil-dna glycosylase
BO992_03165	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
BO992_03180	COG0025	NhaP-type Na H and K H
BO992_03185	COG1131	(ABC) transporter
BO992_03190	COG0842	Transport permease protein
BO992_03210	COG1404	Belongs to the peptidase S8 family
BO992_03225	COG0745	RESPONSE REGULATOR receiver
BO992_03270	COG1522	sequence-specific DNA binding
BO992_03275	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BO992_03300	COG2205	protein histidine kinase activity
BO992_03300	COG2202	Pas domain
BO992_03335	COG2813	Specifically methylates the guanine in position
BO992_03340	COG1187	pseudouridine synthase activity
BO992_03345	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BO992_03380	COG0697	spore germination
BO992_03390	COG2011	ABC-type metal ion transport system permease component
BO992_03420	COG0508	dehydrogenase complex catalyzes the overall conversion of
BO992_03430	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BO992_03450	COG0356	it plays a direct role in the translocation of protons across the membrane
BO992_03535	COG3842	ATPase activity
BO992_03540	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BO992_03545	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
BO992_03560	COG3293	Transposase
BO992_03605	COG0339	signal peptide processing
BO992_03640	COG1956	GAF domain-containing protein
BO992_03655	COG0720	synthase
BO992_03665	COG0513	Belongs to the DEAD box helicase family
BO992_03705	COG0626	cystathionine gamma-synthase activity
BO992_03740	COG3328	transposase activity
BO992_03765	COG2086	electron transfer activity
BO992_03790	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
BO992_03790	COG0662	Cupin 2, conserved barrel domain protein
BO992_03795	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BO992_03830	COG3218	ABC-type transport auxiliary lipoprotein component
BO992_03830	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
BO992_03835	COG1127	ABC transporter
BO992_03840	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
BO992_03865	COG1183	phosphatidylcholine synthase activity
BO992_03890	COG3039	Transposase
BO992_03930	COG2801	Transposase and inactivated derivatives
BO992_03945	COG0525	valine-tRNA ligase activity
BO992_03970	COG0795	lipopolysaccharide-transporting ATPase activity
BO992_03980	COG4974	Belongs to the 'phage' integrase family
BO992_03985	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
BO992_03990	COG0047	phosphoribosylformylglycinamidine synthase activity
BO992_03990	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BO992_03995	COG5295	Hep Hag repeat protein
BO992_04015	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
BO992_04025	COG1459	type II secretion system
BO992_04030	COG2165	general secretion pathway protein
BO992_04035	COG4970	Tfp pilus assembly protein FimT
BO992_04040	COG2165	general secretion pathway protein
BO992_04045	COG4795	General secretion pathway protein
BO992_04050	COG3156	type II secretion system protein K
BO992_04055	COG3166	PFAM Fimbrial assembly family protein
BO992_04070	COG1450	Type ii and iii secretion system protein
BO992_04085	COG2188	Transcriptional regulator
BO992_04125	COG1343	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
BO992_04130	COG1518	maintenance of DNA repeat elements
BO992_04170	COG1399	metal-binding, possibly nucleic acid-binding protein
BO992_04195	COG1028	Short-chain dehydrogenase reductase Sdr
BO992_04210	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
BO992_04215	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
BO992_04255	COG3829	transcription factor binding
BO992_04280	COG3039	Transposase
BO992_04325	COG2826	transposase and inactivated derivatives, IS30 family
BO992_04335	COG0678	peroxiredoxin activity
BO992_04355	COG0330	HflC and HflK could
BO992_04360	COG0330	HflC and HflK could
BO992_04375	COG0308	aminopeptidase N
BO992_04415	COG1560	Kdo2-lipid A biosynthetic process
BO992_04420	COG1519	Transferase
BO992_04425	COG1538	Outer membrane efflux protein
BO992_04430	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
BO992_04515	COG3710	Transcriptional regulator
BO992_04540	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
BO992_04580	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
BO992_04590	COG3781	membrane
BO992_04605	COG0625	glutathione transferase activity
BO992_04615	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
BO992_04640	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
BO992_04665	COG2801	Transposase and inactivated derivatives
BO992_04765	COG3293	Transposase
BO992_04785	COG3039	Transposase
BO992_04805	COG3293	Transposase
BO992_04810	COG0584	glycerophosphoryl diester phosphodiesterase
BO992_04835	COG0473	3-isopropylmalate dehydrogenase activity
BO992_04890	COG0544	peptidyl-prolyl cis-trans isomerase activity
BO992_04895	COG0740	serine-type endopeptidase activity
BO992_04930	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BO992_04955	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
BO992_04965	COG0631	protein serine/threonine phosphatase activity
BO992_04990	COG3501	Rhs element vgr protein
BO992_05045	COG0582	viral genome integration into host DNA
BO992_05055	COG0859	PFAM glycosyl transferase family 9
BO992_05065	COG1234	tRNA 3'-trailer cleavage
BO992_05070	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
BO992_05085	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
BO992_05090	COG0314	molybdopterin synthase activity
BO992_05120	COG0537	adenosine 5'-monophosphoramidase activity
BO992_05140	COG0714	Associated with various cellular activities
BO992_05160	COG0242	peptide deformylase activity
BO992_05205	COG3039	Transposase
BO992_05225	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
BO992_05230	COG0726	polysaccharide deacetylase
BO992_05280	COG2211	Major facilitator Superfamily
BO992_05290	COG1609	Transcriptional regulator
BO992_05295	COG1028	Short-chain dehydrogenase reductase Sdr
BO992_05300	COG2851	Citrate transporter
BO992_05315	COG0642	Histidine kinase
BO992_05320	COG1840	ABC-type Fe3 transport system, periplasmic component
BO992_05325	COG2197	response regulator
BO992_05350	COG0583	DNA-binding transcription factor activity
BO992_05365	COG4191	Histidine kinase
BO992_05385	COG0281	malic enzyme
BO992_05385	COG0280	phosphate acetyltransferase
BO992_05400	COG2801	Transposase and inactivated derivatives
BO992_05420	COG0352	thiamine-phosphate diphosphorylase activity
BO992_05425	COG1773	rubredoxin
BO992_05430	COG2912	Transglutaminase-like superfamily
BO992_05450	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
BO992_05475	COG0006	proline dipeptidase activity
BO992_05490	COG3293	Transposase
BO992_05515	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BO992_05535	COG1561	YicC-like family, N-terminal region
BO992_05560	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BO992_05570	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
BO992_05580	COG0254	rRNA binding
BO992_05595	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
BO992_05640	COG0714	Associated with various cellular activities
BO992_05660	COG2304	oxidoreductase activity
BO992_05680	COG1301	dicarboxylic acid transport
BO992_05685	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
BO992_05690	COG4773	Receptor
BO992_05695	COG0739	heme binding
BO992_05700	COG1376	ErfK ybiS ycfS ynhG family protein
BO992_05725	COG1022	Amp-dependent synthetase and ligase
BO992_05735	COG1028	Short-chain dehydrogenase reductase Sdr
BO992_05745	COG0745	RESPONSE REGULATOR receiver
BO992_05750	COG0642	Histidine kinase
BO992_05770	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
BO992_05775	COG4149	molybdate abc transporter
BO992_05780	COG0725	ABC transporter, periplasmic molybdate-binding protein
BO992_05785	COG3453	Protein conserved in bacteria
BO992_05785	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BO992_05820	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
BO992_05825	COG3293	Transposase
BO992_05840	COG2205	protein histidine kinase activity
BO992_05845	COG0745	RESPONSE REGULATOR receiver
BO992_05895	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BO992_05900	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
BO992_05935	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
BO992_05995	COG2201	protein-glutamate methylesterase activity
BO992_06060	COG1842	Phage shock protein A
BO992_06085	COG0754	glutathionylspermidine amidase activity
BO992_06105	COG0789	Transcriptional regulator
BO992_06160	COG0531	amino acid
BO992_06165	COG2197	response regulator
BO992_06180	COG1113	amino acid transport
BO992_06190	COG1271	oxidase subunit
BO992_06195	COG1294	oxidase, subunit
BO992_06205	COG2239	Acts as a magnesium transporter
BO992_06210	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BO992_06215	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BO992_06235	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BO992_06250	COG1137	ATPase activity
BO992_06255	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
BO992_06265	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
BO992_06275	COG0271	Belongs to the BolA IbaG family
BO992_06300	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
BO992_06325	COG0628	permease
BO992_06335	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
BO992_06340	COG3178	'Phosphotransferase
BO992_06360	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BO992_06365	COG1555	photosystem II stabilization
BO992_06415	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BO992_06425	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
BO992_06475	COG0534	Mate efflux family protein
BO992_06505	COG0542	response to heat
BO992_06520	COG2963	transposase activity
BO992_06535	COG4206	TonB-dependent receptor
BO992_06595	COG0019	diaminopimelate decarboxylase activity
BO992_06605	COG2814	Major facilitator Superfamily
BO992_06610	COG4264	IucA IucC family
BO992_06620	COG4772	TonB-dependent receptor
BO992_06630	COG2801	Transposase and inactivated derivatives
BO992_06635	COG4651	solute:proton antiporter activity
BO992_06635	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
BO992_06670	COG0488	(ABC) transporter
BO992_06695	COG0657	acetylesterase activity
BO992_06695	COG2755	lipolytic protein G-D-S-L family
BO992_06720	COG2207	Transcriptional regulator
BO992_06725	COG0326	Molecular chaperone. Has ATPase activity
BO992_06755	COG3328	transposase activity
BO992_06780	COG2801	Transposase and inactivated derivatives
BO992_06790	COG3039	Transposase
BO992_06805	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
BO992_06810	COG0719	Fe-S assembly protein
BO992_06815	COG0396	ATPase activity
BO992_06820	COG0719	Fe-S assembly protein
BO992_06825	COG1959	2 iron, 2 sulfur cluster binding
BO992_06885	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
BO992_06915	COG0519	Catalyzes the synthesis of GMP from XMP
BO992_06950	COG1764	response to oxidative stress
BO992_06960	COG0384	phenazine biosynthesis protein PhzF
BO992_06965	COG0384	phenazine biosynthesis protein PhzF
BO992_06975	COG0527	aspartate kinase activity
BO992_07005	COG0142	geranyltranstransferase activity
BO992_07010	COG0629	single-stranded DNA binding
BO992_07020	COG5001	Diguanylate cyclase
BO992_07020	COG4251	negative regulation of phosphorylation
BO992_07020	COG3706	GGDEF domain
BO992_07020	COG2203	Gaf domain
BO992_07025	COG1028	Short-chain dehydrogenase reductase Sdr
BO992_07025	COG0604	alcohol dehydrogenase
BO992_07025	COG3321	synthase
BO992_07055	COG2879	small protein
BO992_07060	COG1966	Carbon starvation protein
BO992_07065	COG1741	Belongs to the pirin family
BO992_07075	COG3501	Rhs element vgr protein
BO992_07090	COG3501	Rhs element vgr protein
BO992_07115	COG3501	Rhs element vgr protein
BO992_07155	COG1741	Belongs to the pirin family
BO992_07165	COG1515	deoxyribonuclease V activity
BO992_07185	COG3590	peptidase
BO992_07200	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
BO992_07205	COG2199	diguanylate cyclase activity
BO992_07205	COG2200	EAL domain
BO992_07205	COG2202	Pas domain
BO992_07210	COG0835	chemotaxis
BO992_07215	COG0840	transmembrane signaling receptor activity
BO992_07220	COG2198	Histidine kinase
BO992_07220	COG0643	Histidine kinase
BO992_07230	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
BO992_07240	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
BO992_07250	COG2205	protein histidine kinase activity
BO992_07270	COG3039	Transposase
BO992_07280	COG3039	Transposase
BO992_07300	COG3039	Transposase
BO992_07315	COG3039	Transposase
BO992_07350	COG0735	belongs to the Fur family
BO992_07395	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
BO992_07400	COG0084	hydrolase, TatD family'
BO992_07415	COG1960	acyl-CoA dehydrogenase activity
BO992_07445	COG0367	asparagine synthase
BO992_07455	COG0305	Participates in initiation and elongation during chromosome replication
BO992_07460	COG0415	Belongs to the DNA photolyase family
BO992_07480	COG1028	Short-chain dehydrogenase reductase Sdr
BO992_07530	COG3039	Transposase
BO992_07595	COG5002	protein histidine kinase activity
BO992_07595	COG5001	Diguanylate cyclase
BO992_07600	COG1187	pseudouridine synthase activity
BO992_07630	COG0475	glutathione-regulated potassium exporter activity
BO992_07635	COG5000	phosphorelay sensor kinase activity
BO992_07635	COG5002	protein histidine kinase activity
BO992_07640	COG0745	RESPONSE REGULATOR receiver
BO992_07670	COG1132	(ABC) transporter
BO992_07680	COG3293	Transposase
BO992_07690	COG3039	Transposase
BO992_07700	COG3039	Transposase
BO992_07710	COG3039	Transposase
BO992_07735	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
BO992_07745	COG4969	Belongs to the N-Me-Phe pilin family
BO992_07750	COG2194	sulfuric ester hydrolase activity
BO992_07770	COG2184	nucleotidyltransferase activity
BO992_07795	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
BO992_07805	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BO992_07805	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
BO992_07810	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BO992_07815	COG0564	pseudouridine synthase activity
BO992_07840	COG3387	PFAM Glycoside hydrolase 15-related
BO992_07845	COG1877	trehalose-phosphatase activity
BO992_07905	COG1595	DNA-templated transcription, initiation
BO992_07915	COG1946	Acyl-CoA thioesterase
BO992_07930	COG0824	Thioesterase
BO992_07935	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
BO992_07955	COG0268	Binds directly to 16S ribosomal RNA
BO992_07960	COG0728	peptidoglycan biosynthetic process
BO992_07965	COG0196	riboflavin kinase activity
BO992_07995	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
BO992_08000	COG1845	cytochrome c oxidase, subunit III
BO992_08005	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
BO992_08015	COG3501	Rhs element vgr protein
BO992_08070	COG2801	Transposase and inactivated derivatives
BO992_08075	COG2963	transposase activity
BO992_08175	COG0824	Thioesterase
BO992_08185	COG0848	biopolymer transport protein
BO992_08200	COG2885	chlorophyll binding
BO992_08210	COG0602	queuosine metabolic process
BO992_08215	COG1187	pseudouridine synthase activity
BO992_08260	COG3293	Transposase
BO992_08295	COG0514	ATP-dependent DNA helicase (RecQ)
BO992_08300	COG0783	Belongs to the Dps family
BO992_08305	COG1643	Atp-dependent helicase
BO992_08315	COG0837	glucose binding
BO992_08320	COG0837	glucose binding
BO992_08325	COG0837	glucose binding
BO992_08335	COG3293	Transposase
BO992_08370	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BO992_08385	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BO992_08395	COG1199	ATP-dependent helicase activity
BO992_08405	COG1397	ADP-ribosylglycohydrolase
BO992_08415	COG0189	ligase activity
BO992_08430	COG0835	chemotaxis
BO992_08435	COG0840	transmembrane signaling receptor activity
BO992_08470	COG2304	oxidoreductase activity
BO992_08485	COG1446	asparaginase
BO992_08490	COG3142	Participates in the control of copper homeostasis
BO992_08545	COG3537	Alpha-1,2-mannosidase
BO992_08605	COG1472	Belongs to the glycosyl hydrolase 3 family
BO992_08615	COG3525	Glycosyl hydrolase, family 20, catalytic domain
BO992_08625	COG1388	LysM domain
BO992_08625	COG3858	chitin binding
BO992_08640	COG0837	glucose binding
BO992_08645	COG1385	rRNA (uridine-N3-)-methyltransferase activity
BO992_08655	COG0494	nUDIX hydrolase
BO992_08665	COG3956	TIGRFAM MazG family protein
BO992_08670	COG1742	UPF0060 membrane protein
BO992_08680	COG0330	HflC and HflK could
BO992_08720	COG1960	acyl-CoA dehydrogenase activity
BO992_08730	COG1309	transcriptional regulator
BO992_08735	COG4771	TonB-dependent receptor
BO992_08745	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
BO992_08755	COG0463	Glycosyl transferase, family 2
BO992_08760	COG0517	IMP dehydrogenase activity
BO992_08760	COG0516	GMP reductase activity
BO992_08770	COG1272	protein, Hemolysin III
BO992_08780	COG0739	heme binding
BO992_08785	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
BO992_08790	COG0626	cystathionine gamma-synthase activity
BO992_08800	COG1760	l-serine dehydratase
BO992_08810	COG2353	YceI-like domain
BO992_08820	COG2353	YceI-like domain
BO992_08850	COG2963	transposase activity
BO992_08890	COG1960	acyl-CoA dehydrogenase activity
BO992_08895	COG1024	Enoyl-CoA hydratase
BO992_08915	COG1250	3-hydroxyacyl-CoA dehydrogenase
BO992_08915	COG1024	Enoyl-CoA hydratase
BO992_08930	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BO992_08990	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
BO992_08995	COG3380	Catalyzes the oxidation of the 1,2-dihydro- and 1,6- dihydro- isomeric forms of beta-NAD(P) back to beta-NAD(P) . May serve to protect primary metabolism dehydrogenases from inhibition by the 1,2-dihydro- and 1,6-dihydro-beta-NAD(P) isomers
BO992_09000	COG3046	protein related to deoxyribodipyrimidine photolyase
BO992_09015	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
BO992_09020	COG1278	Cold shock
BO992_09045	COG1201	RNA secondary structure unwinding
BO992_09050	COG1793	dna ligase
BO992_09060	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
BO992_09060	COG1793	dna ligase
BO992_09075	COG3706	GGDEF domain
BO992_09075	COG0745	RESPONSE REGULATOR receiver
BO992_09090	COG0183	Belongs to the thiolase family
BO992_09110	COG1451	nucleotide metabolic process
BO992_09125	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
BO992_09165	COG1047	Peptidyl-prolyl cis-trans
BO992_09180	COG2824	Alkylphosphonate utilization operon protein PhnA
BO992_09190	COG1902	pentaerythritol trinitrate reductase activity
BO992_09195	COG2814	Major facilitator Superfamily
BO992_09250	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
BO992_09250	COG0392	lysyltransferase activity
BO992_09260	COG0251	oxidation-reduction process
BO992_09265	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
BO992_09280	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
BO992_09305	COG1595	DNA-templated transcription, initiation
BO992_09325	COG2878	Part of a membrane complex involved in electron transport
BO992_09355	COG0833	amino acid
BO992_09360	COG2040	homocysteine
BO992_09375	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
BO992_09470	COG1131	(ABC) transporter
BO992_09475	COG4771	TonB-dependent receptor
BO992_09525	COG0750	zinc metalloprotease
BO992_09535	COG0575	Belongs to the CDS family
BO992_09600	COG0024	Methionine aminopeptidase
BO992_09620	COG1393	Belongs to the ArsC family
BO992_09635	COG0367	asparagine synthase
BO992_09650	COG4774	siderophore transport
BO992_09685	COG1566	PFAM secretion protein HlyD family protein
BO992_09690	COG2814	Major facilitator Superfamily
BO992_09750	COG1960	acyl-CoA dehydrogenase activity
BO992_09780	COG2914	Belongs to the UPF0125 (RnfH) family
BO992_09785	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BO992_09795	COG0497	DNA recombination
BO992_09820	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
BO992_09825	COG1605	Chorismate mutase
BO992_09825	COG0287	Prephenate dehydrogenase
BO992_09840	COG0583	DNA-binding transcription factor activity
BO992_09850	COG1132	(ABC) transporter
BO992_09885	COG2850	peptidyl-arginine hydroxylation
BO992_09925	COG3293	Transposase
BO992_09970	COG1131	(ABC) transporter
BO992_09975	COG1725	Transcriptional regulator
BO992_09980	COG0386	Belongs to the glutathione peroxidase family
BO992_10020	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BO992_10030	COG1410	methionine synthase
BO992_10030	COG0646	methionine synthase
BO992_10035	COG0646	methionine synthase
BO992_10035	COG1410	methionine synthase
BO992_10045	COG1960	acyl-CoA dehydrogenase activity
BO992_10070	COG0557	exoribonuclease II activity
BO992_10095	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BO992_10105	COG3039	Transposase
BO992_10120	COG3328	transposase activity
BO992_10130	COG1278	Cold shock
BO992_10145	COG3039	Transposase
BO992_10150	COG3039	Transposase
BO992_10165	COG2801	Transposase and inactivated derivatives
BO992_10205	COG3039	Transposase
BO992_10215	COG0583	DNA-binding transcription factor activity
BO992_10265	COG2201	protein-glutamate methylesterase activity
BO992_10305	COG0531	amino acid
BO992_10310	COG0531	amino acid
BO992_10320	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BO992_10325	COG0277	FAD linked oxidase domain protein
BO992_10385	COG0436	Aminotransferase
BO992_10410	COG1187	pseudouridine synthase activity
BO992_10415	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
BO992_10420	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
BO992_10425	COG2350	Protein conserved in bacteria
BO992_10455	COG1175	transmembrane transport
BO992_10460	COG0395	ABC-type sugar transport system, permease component
BO992_10485	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BO992_10495	COG2957	Belongs to the agmatine deiminase family
BO992_10505	COG0257	Belongs to the bacterial ribosomal protein bL36 family
BO992_10515	COG0539	negative regulation of cytoplasmic translation
BO992_10530	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
BO992_10535	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BO992_10545	COG1210	Utp--glucose-1-phosphate uridylyltransferase
BO992_10550	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
BO992_10550	COG0475	glutathione-regulated potassium exporter activity
BO992_10605	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
BO992_10610	COG0583	DNA-binding transcription factor activity
BO992_10640	COG0583	DNA-binding transcription factor activity
BO992_10660	COG1914	H( )-stimulated, divalent metal cation uptake system
BO992_10665	COG1321	iron dependent repressor
BO992_10670	COG0590	tRNA wobble adenosine to inosine editing
BO992_10680	COG0668	transmembrane transport
BO992_10715	COG3039	Transposase
BO992_10725	COG1028	Short-chain dehydrogenase reductase Sdr
BO992_10730	COG1183	phosphatidylcholine synthase activity
BO992_10740	COG3243	poly(R)-hydroxyalkanoic acid synthase
BO992_10755	COG0723	plastoquinol--plastocyanin reductase activity
BO992_10755	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BO992_10765	COG2183	response to ionizing radiation
BO992_10780	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
BO992_10795	COG0671	phosphoesterase, PA-phosphatase related
BO992_10815	COG1794	racemase activity, acting on amino acids and derivatives
BO992_10820	COG0697	spore germination
BO992_10845	COG1012	belongs to the aldehyde dehydrogenase family
BO992_10880	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
BO992_10895	COG0124	histidyl-tRNA synthetase
BO992_10950	COG0140	phosphoribosyl-ATP diphosphatase activity
BO992_10950	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
BO992_11045	COG3293	Transposase
BO992_11070	COG3293	Transposase
BO992_11100	COG3293	Transposase
BO992_11120	COG2201	protein-glutamate methylesterase activity
BO992_11145	COG3039	Transposase
BO992_11160	COG3328	transposase activity
BO992_11205	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
BO992_11230	COG0811	peptide transport
BO992_11255	COG4591	ABC-type transport system involved in lipoprotein release permease component
BO992_11270	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
BO992_11285	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
BO992_11295	COG0354	folic acid binding
BO992_11310	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
BO992_11320	COG0363	glucosamine-6-phosphate deaminase activity
BO992_11325	COG0129	dihydroxy-acid dehydratase activity
BO992_11330	COG0800	Aldolase
BO992_11365	COG0784	Response regulator, receiver
BO992_11365	COG2205	protein histidine kinase activity
BO992_11365	COG5002	protein histidine kinase activity
BO992_11375	COG3293	Transposase
BO992_11395	COG3706	GGDEF domain
BO992_11455	COG0386	Belongs to the glutathione peroxidase family
BO992_11540	COG5001	Diguanylate cyclase
BO992_11540	COG4251	negative regulation of phosphorylation
BO992_11540	COG3706	GGDEF domain
BO992_11540	COG2203	Gaf domain
BO992_11555	COG1472	Belongs to the glycosyl hydrolase 3 family
BO992_11600	COG0617	tRNA 3'-terminal CCA addition
BO992_11615	COG0860	N-Acetylmuramoyl-L-alanine amidase
BO992_11670	COG4566	intracellular signal transduction
BO992_11690	COG2963	transposase activity
BO992_11705	COG0077	Prephenate dehydratase
BO992_11705	COG1605	Chorismate mutase
BO992_11715	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
BO992_11765	COG2986	histidine ammonia-lyase
BO992_11775	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
BO992_11795	COG2963	transposase activity
BO992_11820	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
BO992_11835	COG3115	cell septum assembly
BO992_11860	COG0316	Belongs to the HesB IscA family
BO992_11895	COG0288	reversible hydration of carbon dioxide
BO992_11920	COG2925	Exonuclease
BO992_11930	COG0667	Aldo Keto reductase
BO992_11960	COG0488	(ABC) transporter
BO992_11965	COG4133	protoheme IX ABC transporter activity
BO992_11970	COG0488	(ABC) transporter
BO992_12005	COG0494	nUDIX hydrolase
BO992_12015	COG1024	Enoyl-CoA hydratase
BO992_12025	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
BO992_12040	COG3039	Transposase
BO992_12055	COG3293	Transposase
BO992_12075	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
BO992_12080	COG0573	inorganic phosphate transmembrane transporter activity
BO992_12095	COG0704	Plays a role in the regulation of phosphate uptake
BO992_12105	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
BO992_12120	COG3328	transposase activity
BO992_12150	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BO992_12160	COG1862	Preprotein translocase
BO992_12240	COG3293	Transposase
BO992_12255	COG0405	Gamma-glutamyltransferase
BO992_12260	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
BO992_12280	COG0742	ribosomal rna small subunit methyltransferase
BO992_12305	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
BO992_12340	COG3039	Transposase
BO992_12350	COG3039	Transposase
BO992_12385	COG0303	'Molybdopterin
BO992_12395	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BO992_12405	COG1426	Protein conserved in bacteria
BO992_12420	COG0105	UTP biosynthetic process
BO992_12430	COG1250	3-hydroxyacyl-CoA dehydrogenase
BO992_12430	COG1024	Enoyl-CoA hydratase
BO992_12435	COG0183	Belongs to the thiolase family
BO992_12440	COG0038	chloride channel
BO992_12460	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
BO992_12480	COG1674	ftsk spoiiie
BO992_12485	COG0492	ferredoxin-NADP+ reductase activity
BO992_12510	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
BO992_12515	COG0542	response to heat
BO992_12520	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
BO992_12530	COG0482	sulfurtransferase activity
BO992_12555	COG5001	Diguanylate cyclase
BO992_12560	COG4585	Histidine kinase
BO992_12570	COG5002	protein histidine kinase activity
BO992_12590	COG0835	chemotaxis
BO992_12590	COG0784	Response regulator, receiver
BO992_12600	COG1558	bacterial-type flagellum-dependent cell motility
BO992_12605	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
BO992_12610	COG1749	Flagellar hook protein flgE
BO992_12615	COG4787	bacterial-type flagellum-dependent cell motility
BO992_12620	COG4786	Flagellar basal body rod
BO992_12650	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BO992_12655	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
BO992_12685	COG2201	protein-glutamate methylesterase activity
BO992_12690	COG2204	response regulator
BO992_12705	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BO992_12715	COG1028	Short-chain dehydrogenase reductase Sdr
BO992_12745	COG1677	Flagellar hook-basal body complex protein FliE
BO992_12795	COG3190	flagellar
BO992_12805	COG1987	bacterial-type flagellum assembly
BO992_12810	COG1684	flagellar biosynthetic protein fliR
BO992_12815	COG3300	MHYT domain
BO992_12815	COG5001	Diguanylate cyclase
BO992_12820	COG3300	MHYT domain
BO992_12820	COG5001	Diguanylate cyclase
BO992_12835	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
BO992_12845	COG0455	bacterial-type flagellum organization
BO992_12865	COG0643	Histidine kinase
BO992_12865	COG2198	Histidine kinase
BO992_12895	COG3039	Transposase
BO992_12990	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
BO992_12995	COG4988	ABC transporter
BO992_13015	COG1271	oxidase subunit
BO992_13025	COG1294	oxidase, subunit
BO992_13085	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
BO992_13090	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BO992_13100	COG0137	argininosuccinate synthase activity
BO992_13105	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
BO992_13120	COG2166	iron-sulfur cluster assembly
BO992_13135	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
BO992_13150	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
BO992_13160	COG4302	ethanolamine ammonia-lyase activity
BO992_13165	COG3293	Transposase
BO992_13190	COG3039	Transposase
BO992_13200	COG4677	pectinesterase activity
BO992_13235	COG0402	S-adenosylhomocysteine deaminase activity
BO992_13250	COG1509	lysine 2,3-aminomutase activity
BO992_13255	COG3300	MHYT domain
BO992_13255	COG5001	Diguanylate cyclase
BO992_13270	COG0483	inositol monophosphate 1-phosphatase activity
BO992_13305	COG0513	Belongs to the DEAD box helicase family
BO992_13325	COG0625	glutathione transferase activity
BO992_13340	COG4681	YaeQ
BO992_13345	COG2081	HI0933 family
BO992_13365	COG1028	Short-chain dehydrogenase reductase Sdr
BO992_13390	COG0860	N-Acetylmuramoyl-L-alanine amidase
BO992_13395	COG0802	atpase or kinase
BO992_13400	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
BO992_13400	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
BO992_13405	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
BO992_13415	COG3293	Transposase
BO992_13435	COG1262	PFAM Formylglycine-generating sulfatase enzyme
BO992_13490	COG3328	transposase activity
BO992_13520	COG2969	positive regulation of protein catabolic process
BO992_13525	COG0625	glutathione transferase activity
BO992_13530	COG2857	Cytochrome c1
BO992_13535	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
BO992_13540	COG0723	plastoquinol--plastocyanin reductase activity
BO992_13545	COG0741	lytic transglycosylase activity
BO992_13575	COG1702	phosphate starvation-inducible protein PhoH
BO992_13595	COG4535	Mg2 and Co2 transporter CorC
BO992_13610	COG1012	belongs to the aldehyde dehydrogenase family
BO992_13620	COG1177	transmembrane transport
BO992_13665	COG0174	glutamine synthetase
BO992_13670	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BO992_13675	COG3706	GGDEF domain
BO992_13675	COG0745	RESPONSE REGULATOR receiver
BO992_13680	COG0477	Major facilitator Superfamily
BO992_13690	COG0243	molybdopterin cofactor binding
BO992_13705	COG3293	Transposase
BO992_13720	COG1121	(ABC) transporter
BO992_13730	COG2733	membrane
BO992_13735	COG2205	protein histidine kinase activity
BO992_13735	COG0784	Response regulator, receiver
BO992_13735	COG5002	protein histidine kinase activity
BO992_13745	COG3039	Transposase
BO992_13750	COG2902	Dehydrogenase
BO992_13760	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BO992_13765	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BO992_13785	COG1609	Transcriptional regulator
BO992_13790	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
BO992_13790	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BO992_13795	COG1105	Belongs to the carbohydrate kinase PfkB family
BO992_13800	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BO992_13800	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BO992_13815	COG3039	Transposase
BO992_13820	COG3039	Transposase
BO992_13865	COG3501	Rhs element vgr protein
BO992_13870	COG2963	transposase activity
BO992_13885	COG3501	Rhs element vgr protein
BO992_13925	COG3039	Transposase
BO992_13955	COG4771	TonB-dependent receptor
BO992_13965	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
BO992_13985	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
BO992_13990	COG1360	Flagellar Motor Protein
BO992_13995	COG1192	Involved in chromosome partitioning
BO992_14000	COG0835	chemotaxis
BO992_14010	COG0745	RESPONSE REGULATOR receiver
BO992_14040	COG0840	transmembrane signaling receptor activity
BO992_14050	COG0840	transmembrane signaling receptor activity
BO992_14060	COG0840	transmembrane signaling receptor activity
BO992_14065	COG0840	transmembrane signaling receptor activity
BO992_14070	COG0840	transmembrane signaling receptor activity
BO992_14075	COG0840	transmembrane signaling receptor activity
BO992_14090	COG0835	chemotaxis
BO992_14110	COG0840	transmembrane signaling receptor activity
BO992_14140	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
BO992_14170	COG0318	PFAM AMP-dependent synthetase and ligase
BO992_14175	COG1024	Enoyl-CoA hydratase
BO992_14180	COG2205	protein histidine kinase activity
BO992_14180	COG2198	Histidine kinase
BO992_14180	COG0784	Response regulator, receiver
BO992_14200	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
BO992_14230	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
BO992_14240	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BO992_14245	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
BO992_14255	COG0505	Belongs to the CarA family
BO992_14260	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
BO992_14270	COG3293	Transposase
BO992_14275	COG2258	MOSC domain
BO992_14280	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BO992_14350	COG0477	Major facilitator Superfamily
BO992_14360	COG1070	Carbohydrate kinase
BO992_14375	COG1501	Belongs to the glycosyl hydrolase 31 family
BO992_14390	COG0800	Aldolase
BO992_14405	COG3734	2-keto-3-deoxy-galactonokinase
BO992_14410	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
BO992_14420	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BO992_14435	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
BO992_14440	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
BO992_14450	COG0351	phosphomethylpyrimidine kinase
BO992_14480	COG0583	DNA-binding transcription factor activity
BO992_14485	COG1741	Belongs to the pirin family
BO992_14505	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
BO992_14510	COG0305	Participates in initiation and elongation during chromosome replication
BO992_14530	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
BO992_14540	COG2137	regulation of response to DNA damage stimulus
BO992_14560	COG1546	Belongs to the CinA family
BO992_14565	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
BO992_14570	COG1923	regulation of RNA biosynthetic process
BO992_14580	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
BO992_14585	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
BO992_14595	COG1534	Rna-binding protein
BO992_14610	COG1238	metal cluster binding
BO992_14625	COG2840	Smr protein MutS2
BO992_14695	COG1434	Gram-negative-bacterium-type cell wall biogenesis
BO992_14700	COG0306	phosphate transporter
BO992_14710	COG1253	flavin adenine dinucleotide binding
BO992_14725	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BO992_14735	COG0477	Major facilitator Superfamily
BO992_14745	COG1132	(ABC) transporter
BO992_14750	COG1136	(ABC) transporter
BO992_14770	COG0438	transferase activity, transferring glycosyl groups
BO992_14780	COG2264	protein methyltransferase activity
BO992_14810	COG2244	polysaccharide biosynthetic process
BO992_14860	COG1595	DNA-templated transcription, initiation
BO992_14875	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BO992_14895	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BO992_14910	COG2201	protein-glutamate methylesterase activity
BO992_14925	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BO992_14930	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BO992_14960	COG2963	transposase activity
BO992_14975	COG4644	lycopene metabolic process
BO992_14985	COG1858	cytochrome C peroxidase
BO992_15025	COG0515	serine threonine protein kinase
BO992_15030	COG0631	protein serine/threonine phosphatase activity
BO992_15065	COG3501	Rhs element vgr protein
BO992_15075	COG3039	Transposase
BO992_15130	COG3039	Transposase
BO992_15145	COG3039	Transposase
BO992_15175	COG2801	Transposase and inactivated derivatives
BO992_15185	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
BO992_15185	COG0316	Belongs to the HesB IscA family
BO992_15190	COG2154	pterin-4-alpha-carbinolamine dehydratase
BO992_15205	COG3064	Membrane
BO992_15215	COG1530	ribonuclease E activity
BO992_15225	COG3293	Transposase
BO992_15240	COG3039	Transposase
BO992_15260	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
BO992_15300	COG3039	Transposase
BO992_15335	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
BO992_15335	COG1648	precorrin-2 dehydrogenase activity
BO992_15360	COG0746	molybdenum cofactor guanylyltransferase activity
BO992_15420	COG3328	transposase activity
BO992_15425	COG4206	TonB-dependent receptor
BO992_15455	COG4206	TonB-dependent receptor
BO992_15505	COG0531	amino acid
BO992_15520	COG0006	proline dipeptidase activity
BO992_15530	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BO992_15545	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BO992_15550	COG3938	Belongs to the proline racemase family
BO992_15560	COG0552	protein localization to endoplasmic reticulum
BO992_15585	COG4191	Histidine kinase
BO992_15585	COG0784	Response regulator, receiver
BO992_15605	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
BO992_15720	COG0438	transferase activity, transferring glycosyl groups
BO992_15725	COG0438	transferase activity, transferring glycosyl groups
BO992_15770	COG0776	regulation of translation
BO992_15785	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
BO992_15790	COG0291	Belongs to the bacterial ribosomal protein bL35 family
BO992_15795	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
BO992_15810	COG2963	transposase activity
BO992_15830	COG0556	nucleotide-excision repair
BO992_15835	COG4969	Belongs to the N-Me-Phe pilin family
BO992_15875	COG1611	Belongs to the LOG family
BO992_15890	COG2095	MarC family integral membrane protein
BO992_15900	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
BO992_15905	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
BO992_15940	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
BO992_15960	COG0195	Participates in both transcription termination and antitermination
BO992_15975	COG1007	ATP synthesis coupled electron transport
BO992_15990	COG0713	ATP synthesis coupled electron transport
BO992_16010	COG1034	ATP synthesis coupled electron transport
BO992_16015	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
BO992_16020	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
BO992_16040	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BO992_16060	COG1028	Short-chain dehydrogenase reductase Sdr
BO992_16080	COG3293	Transposase
BO992_16160	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
BO992_16165	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BO992_16175	COG2890	protein-(glutamine-N5) methyltransferase activity
BO992_16200	COG0433	COG0433 Predicted ATPase
BO992_16220	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BO992_16230	COG0412	Dienelactone hydrolase
BO992_16250	COG0489	protein tyrosine kinase activity
BO992_16285	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BO992_16290	COG2311	Membrane
BO992_16295	COG1047	Peptidyl-prolyl cis-trans
BO992_16300	COG0791	NLP P60 protein
BO992_16305	COG0791	NLP P60 protein
BO992_16320	COG1301	dicarboxylic acid transport
BO992_16325	COG1785	Belongs to the alkaline phosphatase family
BO992_16330	COG0037	tRNA processing
BO992_16340	COG0142	geranyltranstransferase activity
BO992_16360	COG0312	modulator of DNA gyrase
BO992_16365	COG3028	Belongs to the UPF0307 family
BO992_16370	COG0312	modulator of DNA gyrase
BO992_16375	COG3164	Protein of unknown function
BO992_16380	COG1530	ribonuclease E activity
BO992_16390	COG2968	Membrane
BO992_16435	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
BO992_16460	COG3118	belongs to the thioredoxin family
BO992_16475	COG3293	Transposase
BO992_16525	COG3293	Transposase
BO992_16540	COG3039	Transposase
BO992_16545	COG3039	Transposase
BO992_16565	COG3293	Transposase
BO992_16595	COG2801	Transposase and inactivated derivatives
BO992_16600	COG2963	transposase activity
BO992_16645	COG3273	potassium ion transport
BO992_16645	COG0471	metal ion transport
BO992_16680	COG1970	mechanosensitive ion channel activity
BO992_16695	COG3293	Transposase
BO992_16705	COG2272	Belongs to the type-B carboxylesterase lipase family
BO992_16710	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BO992_16740	COG0308	aminopeptidase N
BO992_16745	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BO992_16755	COG0529	Catalyzes the synthesis of activated sulfate
BO992_16755	COG2895	sulfate adenylyltransferase (ATP) activity
BO992_16765	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
BO992_16795	COG0784	Response regulator, receiver
BO992_16795	COG2205	protein histidine kinase activity
BO992_16795	COG2198	Histidine kinase
BO992_16845	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
BO992_16850	COG3588	fructose-bisphosphate aldolase
BO992_16855	COG0469	pyruvate kinase activity
BO992_16895	COG0753	catalase activity
BO992_16915	COG3039	Transposase
BO992_16935	COG1917	Cupin 2, conserved barrel domain protein
BO992_16935	COG2207	Transcriptional regulator
BO992_16970	COG1506	peptidase
BO992_16970	COG0823	Involved in the tonB-independent uptake of proteins
BO992_16995	COG3039	Transposase
BO992_17000	COG1297	OPT oligopeptide transporter protein
BO992_17060	COG0328	RNA-DNA hybrid ribonuclease activity
BO992_17060	COG0406	alpha-ribazole phosphatase activity
BO992_17100	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
BO992_17105	COG3039	Transposase
BO992_17120	COG0732	type I restriction modification DNA specificity domain
BO992_17125	COG3039	Transposase
BO992_17135	COG1708	protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity
BO992_17140	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
BO992_17160	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
BO992_17260	COG3501	Rhs element vgr protein
BO992_17330	COG3501	Rhs element vgr protein
BO992_17340	COG3039	Transposase
BO992_17390	COG3501	Rhs element vgr protein
BO992_17440	COG2963	transposase activity
BO992_17470	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
BO992_17485	COG2197	response regulator
BO992_17490	COG4585	Histidine kinase
BO992_17505	COG2894	cell division
BO992_17510	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
BO992_17520	COG0642	Histidine kinase
BO992_17525	COG0745	RESPONSE REGULATOR receiver
BO992_17530	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
BO992_17540	COG2194	sulfuric ester hydrolase activity
BO992_17570	COG3551	Protein conserved in bacteria
BO992_17610	COG2801	Transposase and inactivated derivatives
BO992_17625	COG3293	Transposase
BO992_17640	COG0203	ribosomal protein L17
BO992_17645	COG0202	RNA polymerase activity
BO992_17660	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
BO992_17665	COG0201	protein transport
BO992_17675	COG1841	ribosomal large subunit assembly
BO992_17680	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
BO992_17700	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
BO992_17720	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
BO992_17725	COG0255	Belongs to the universal ribosomal protein uL29 family
BO992_17730	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
BO992_17755	COG0089	rRNA binding
BO992_17795	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
BO992_17830	COG0250	Participates in transcription elongation, termination and antitermination
BO992_17835	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
BO992_17865	COG0012	GTP binding
BO992_17880	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
BO992_17920	COG0521	Mo-molybdopterin cofactor biosynthetic process
BO992_17940	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BO992_17975	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
BO992_17985	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BO992_18015	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
BO992_18020	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
BO992_18040	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
BO992_18055	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BO992_18055	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BO992_18100	COG2890	protein-(glutamine-N5) methyltransferase activity
BO992_18110	COG3634	alkyl hydroperoxide reductase activity
BO992_18115	COG0583	DNA-binding transcription factor activity
BO992_18120	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BO992_18185	COG4783	chaperone-mediated protein folding
BO992_18200	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
BO992_18210	COG0438	transferase activity, transferring glycosyl groups
BO992_18215	COG0671	phosphoesterase, PA-phosphatase related
BO992_18235	COG2833	Protein of unknown function (DUF455)
BO992_18255	COG0285	dihydrofolate synthase activity
BO992_18265	COG0406	alpha-ribazole phosphatase activity
BO992_18295	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
BO992_18300	COG4208	sulfate ABC transporter
BO992_18305	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
BO992_18310	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
BO992_18315	COG0156	8-amino-7-oxononanoate synthase activity
BO992_18345	COG0446	pyridine nucleotide-disulphide oxidoreductase
BO992_18345	COG1902	pentaerythritol trinitrate reductase activity
BO992_18390	COG0745	RESPONSE REGULATOR receiver
BO992_18390	COG3706	GGDEF domain
BO992_18430	COG3293	Transposase
BO992_18475	COG3386	PFAM SMP-30 Gluconolaconase
BO992_18495	COG1024	Enoyl-CoA hydratase
BO992_18505	COG0318	PFAM AMP-dependent synthetase and ligase
BO992_18510	COG0583	DNA-binding transcription factor activity
BO992_18550	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BO992_18555	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BO992_18565	COG2096	Adenosyltransferase
BO992_18570	COG0123	including yeast histone deacetylase and acetoin utilization protein
BO992_18585	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
BO992_18645	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
BO992_18665	COG0642	Histidine kinase
BO992_18680	COG4181	ATPase activity
BO992_18690	COG2175	clavaminate synthase activity
BO992_18700	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
BO992_18740	COG0667	Aldo Keto reductase
BO992_18750	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BO992_18755	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BO992_18770	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BO992_18775	COG4106	trans-aconitate 2-methyltransferase activity
BO992_18785	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
BO992_18795	COG3293	Transposase
BO992_18840	COG2226	methyltransferase
BO992_18895	COG0604	alcohol dehydrogenase
BO992_18895	COG3321	synthase
BO992_18895	COG1028	Short-chain dehydrogenase reductase Sdr
BO992_18905	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
BO992_18920	COG0494	nUDIX hydrolase
BO992_18935	COG1388	LysM domain
BO992_18935	COG4942	peptidase
BO992_18960	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
BO992_18965	COG1181	Belongs to the D-alanine--D-alanine ligase family
BO992_18985	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BO992_18990	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
BO992_19005	COG3116	cell division
BO992_19050	COG1988	membrane-bound metal-dependent
BO992_19055	COG0277	FAD linked oxidase domain protein
BO992_19060	COG0745	RESPONSE REGULATOR receiver
BO992_19065	COG2205	protein histidine kinase activity
BO992_19075	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
BO992_19080	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
BO992_19105	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
BO992_19135	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BO992_19135	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BO992_19175	COG0488	(ABC) transporter
BO992_19220	COG0745	RESPONSE REGULATOR receiver
BO992_19225	COG2205	protein histidine kinase activity
BO992_19295	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
BO992_19305	COG3039	Transposase
BO992_19310	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
BO992_19315	COG3293	Transposase
BO992_19325	COG3039	Transposase
BO992_19365	COG3039	Transposase
BO992_19375	COG3293	Transposase
BO992_19415	COG0726	polysaccharide deacetylase
BO992_19415	COG1649	PFAM Uncharacterised BCR, COG1649
BO992_19420	COG1215	transferase activity, transferring glycosyl groups
BO992_19430	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
BO992_19435	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
BO992_19440	COG1609	Transcriptional regulator
BO992_19465	COG3250	beta-galactosidase activity
BO992_19480	COG2963	transposase activity
BO992_19490	COG2801	Transposase and inactivated derivatives
BO992_19510	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
BO992_19515	COG4191	Histidine kinase
BO992_19520	COG0784	Response regulator, receiver
BO992_19525	COG4251	negative regulation of phosphorylation
BO992_19530	COG2823	Periplasmic or secreted lipoprotein
BO992_19535	COG0673	inositol 2-dehydrogenase activity
BO992_19540	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
BO992_19580	COG1051	belongs to the nudix hydrolase family
BO992_19580	COG1056	cytidyltransferase-related domain
BO992_19625	COG1686	Belongs to the peptidase S11 family
BO992_19635	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
BO992_19640	COG2951	lytic endotransglycosylase activity
BO992_19650	COG3501	Rhs element vgr protein
BO992_19675	COG0772	Belongs to the SEDS family
BO992_19690	COG1792	Involved in formation and maintenance of cell shape
BO992_19695	COG1077	Cell shape determining protein MreB Mrl
BO992_19750	COG2199	diguanylate cyclase activity
BO992_19755	COG0308	aminopeptidase N
BO992_19785	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
BO992_19830	COG1505	serine-type exopeptidase activity
BO992_19865	COG3275	phosphorelay sensor kinase activity
BO992_19885	COG3293	Transposase
BO992_19900	COG3706	GGDEF domain
BO992_19910	COG0659	secondary active sulfate transmembrane transporter activity
BO992_19915	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
BO992_19915	COG5297	Belongs to the glycosyl hydrolase family 6
BO992_19925	COG0840	transmembrane signaling receptor activity
BO992_19960	COG3293	Transposase
BO992_20000	COG0598	Magnesium transport protein CorA
BO992_20010	COG1113	amino acid transport
BO992_20015	COG5297	Belongs to the glycosyl hydrolase family 6
BO992_20020	COG4305	rare lipoprotein A
BO992_20025	COG0697	spore germination
BO992_20095	COG4221	oxidoreductase activity
BO992_20105	COG2801	Transposase and inactivated derivatives
BO992_20130	COG0456	acetyltransferase
BO992_20140	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
BO992_20190	COG2111	Na H antiporter
BO992_20190	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
BO992_20195	COG1006	Multisubunit Na H antiporter MnhC subunit
BO992_20200	COG0651	ATP synthesis coupled electron transport
BO992_20210	COG2212	antiporter activity
BO992_20215	COG1320	monovalent cation:proton antiporter activity
BO992_20240	COG3104	oligopeptide transport
BO992_20285	COG0183	Belongs to the thiolase family
BO992_20335	COG3039	Transposase
BO992_20365	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
BO992_20370	COG3023	N-Acetylmuramoyl-L-alanine amidase
BO992_20380	COG4948	Mandelate Racemase Muconate Lactonizing
BO992_20410	COG3293	Transposase
BO992_20420	COG0531	amino acid
BO992_20435	COG3293	Transposase
BO992_20455	COG4682	membrane
BO992_20460	COG2133	pyrroloquinoline quinone binding
BO992_20500	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
BO992_20510	COG0828	Belongs to the bacterial ribosomal protein bS21 family
BO992_20515	COG1610	YqeY-like protein
BO992_20525	COG1295	ribonuclease BN
BO992_20530	COG0358	DNA primase activity
BO992_20595	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
BO992_20605	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
BO992_20625	COG2801	Transposase and inactivated derivatives
BO992_20730	COG2801	Transposase and inactivated derivatives
BO992_20780	COG3039	Transposase
BO992_20790	COG3328	transposase activity
BO992_20805	COG1473	amidohydrolase
BO992_20810	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BO992_20815	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BO992_20825	COG5383	Protein conserved in bacteria
BO992_20855	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BO992_20875	COG0028	Belongs to the TPP enzyme family
BO992_20880	COG4191	Histidine kinase
BO992_20905	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
BO992_20920	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BO992_20925	COG3177	Filamentation induced by cAMP protein fic
BO992_20940	COG0596	Alpha beta hydrolase
BO992_20950	COG0318	PFAM AMP-dependent synthetase and ligase
BO992_20955	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BO992_21010	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
BO992_21040	COG3039	Transposase
BO992_21155	COG2353	YceI-like domain
BO992_21195	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
BO992_21210	COG3386	PFAM SMP-30 Gluconolaconase
BO992_21255	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
BO992_21270	COG4771	TonB-dependent receptor
BO992_21285	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
BO992_21315	COG1252	NADH dehydrogenase
BO992_21325	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
BO992_21335	COG2201	protein-glutamate methylesterase activity
BO992_21340	COG2177	Part of the ABC transporter FtsEX involved in
BO992_21345	COG2884	Cell division ATP-binding protein ftsE
BO992_21355	COG3118	belongs to the thioredoxin family
BO992_21360	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
BO992_21380	COG0729	surface antigen
BO992_21385	COG2911	Protein conserved in bacteria
BO992_21420	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
BO992_21435	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BO992_21490	COG1733	regulation of RNA biosynthetic process
BO992_21495	COG0702	epimerase
BO992_21525	COG0583	DNA-binding transcription factor activity
BO992_21530	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
BO992_21545	COG2205	protein histidine kinase activity
BO992_21550	COG2205	protein histidine kinase activity
BO992_21555	COG0745	RESPONSE REGULATOR receiver
BO992_21585	COG1902	pentaerythritol trinitrate reductase activity
BO992_21590	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
BO992_21600	COG2814	Major facilitator Superfamily
BO992_21605	COG0583	DNA-binding transcription factor activity
BO992_21620	COG0084	hydrolase, TatD family'
BO992_21655	COG3293	Transposase
BO992_21675	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
BO992_21745	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
BO992_21750	COG1960	acyl-CoA dehydrogenase activity
BO992_21810	COG0523	cobalamin synthesis protein
BO992_21820	COG0697	spore germination
BO992_21830	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
BO992_21845	COG4771	TonB-dependent receptor
BO992_21850	COG0457	Tetratricopeptide repeat
BO992_21865	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
BO992_21880	COG0518	GMP synthase (glutamine-hydrolyzing) activity
BO992_21880	COG0519	Catalyzes the synthesis of GMP from XMP
BO992_21890	COG0805	protein transport
BO992_21900	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
BO992_21910	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
BO992_21955	COG3661	Belongs to the glycosyl hydrolase 67 family
BO992_21965	COG4948	Mandelate Racemase Muconate Lactonizing
BO992_21975	COG1472	Belongs to the glycosyl hydrolase 3 family
BO992_21980	COG0246	Mannitol dehydrogenase
BO992_22005	COG3693	PFAM glycoside hydrolase, family 10
BO992_22010	COG3693	PFAM glycoside hydrolase, family 10
BO992_22030	COG2211	Major facilitator Superfamily
BO992_22065	COG3293	Transposase
BO992_22125	COG1846	Transcriptional regulator
BO992_22130	COG1764	response to oxidative stress
BO992_22215	COG3549	Plasmid maintenance system killer
BO992_22225	COG1074	ATP-dependent DNA helicase activity
BO992_22230	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
BO992_22270	COG2032	superoxide dismutase activity
BO992_22275	COG2032	superoxide dismutase activity
BO992_22280	COG2204	response regulator
BO992_22285	COG3852	Histidine kinase
BO992_22290	COG0004	ammonium transporteR
BO992_22295	COG0347	Belongs to the P(II) protein family
BO992_22300	COG0174	glutamine synthetase
BO992_22350	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BO992_22360	COG2062	phosphohistidine phosphatase, SixA
BO992_22365	COG0489	protein tyrosine kinase activity
BO992_22385	COG1396	sequence-specific DNA binding
BO992_22390	COG3550	peptidyl-serine autophosphorylation
BO992_22395	COG4301	Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine
BO992_22400	COG1262	PFAM Formylglycine-generating sulfatase enzyme
BO992_22415	COG1125	glycine betaine transport
BO992_22415	COG0517	IMP dehydrogenase activity
BO992_22430	COG1119	ATPase activity
BO992_22440	COG1752	Esterase of the alpha-beta hydrolase superfamily
BO992_22455	COG3039	Transposase
BO992_22465	COG2963	transposase activity
BO992_22480	COG0656	L-ascorbic acid biosynthetic process
BO992_22485	COG2130	NADP-dependent
BO992_22490	COG0667	Aldo Keto reductase
BO992_22500	COG1187	pseudouridine synthase activity
BO992_22515	COG1643	Atp-dependent helicase
BO992_22520	COG4807	Protein conserved in bacteria
BO992_22525	COG4948	Mandelate Racemase Muconate Lactonizing
BO992_22530	COG0179	Fumarylacetoacetate (FAA) hydrolase
BO992_22535	COG1028	Short-chain dehydrogenase reductase Sdr
BO992_22555	COG3507	Belongs to the glycosyl hydrolase 43 family
BO992_22600	COG3162	membrane
BO992_22605	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BO992_22620	COG0708	Exodeoxyribonuclease III
BO992_22635	COG2091	lysine biosynthetic process via aminoadipic acid
BO992_22645	COG3540	Alkaline phosphatase
BO992_22665	COG0227	Belongs to the bacterial ribosomal protein bL28 family
BO992_22670	COG0267	Belongs to the bacterial ribosomal protein bL33 family
BO992_22695	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
BO992_22700	COG0583	DNA-binding transcription factor activity
BO992_22705	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BO992_22720	COG0210	DNA helicase
BO992_22735	COG0531	amino acid
BO992_22740	COG1322	Protein conserved in bacteria
BO992_22750	COG0386	Belongs to the glutathione peroxidase family
BO992_22810	COG0793	Belongs to the peptidase S41A family
BO992_22815	COG4942	peptidase
BO992_22825	COG2234	aminopeptidase activity
BO992_22875	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
BO992_22880	COG0302	gtp cyclohydrolase
BO992_22905	COG0477	Major facilitator Superfamily
BO992_22980	COG1929	Belongs to the glycerate kinase type-1 family
BO992_22985	COG2271	Major facilitator Superfamily
BO992_23000	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
BO992_23005	COG0861	Integral membrane protein TerC family
BO992_23015	COG0584	glycerophosphoryl diester phosphodiesterase
BO992_23025	COG0671	phosphoesterase, PA-phosphatase related
BO992_23035	COG0726	polysaccharide deacetylase
BO992_23050	COG0230	Belongs to the bacterial ribosomal protein bL34 family