locus-tag class description B4599_00010 PF00308 Bacterial dnaA protein B4599_00010 PF08299 Bacterial dnaA protein helix-turn-helix B4599_00010 PF11638 DnaA N-terminal domain B4599_00015 PF00712 DNA polymerase III beta subunit, N-terminal domain B4599_00015 PF02768 DNA polymerase III beta subunit, C-terminal domain B4599_00015 PF02767 DNA polymerase III beta subunit, central domain B4599_00020 PF02463 RecF/RecN/SMC N terminal domain B4599_00025 PF01751 Toprim domain B4599_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B4599_00025 PF00986 DNA gyrase B subunit, carboxyl terminus B4599_00025 PF00204 DNA gyrase B B4599_00025 PF18053 DNA gyrase B subunit insert domain B4599_00035 PF01435 Peptidase family M48 B4599_00045 PF03544 Gram-negative bacterial TonB protein C-terminal B4599_00050 PF01618 MotA/TolQ/ExbB proton channel family B4599_00055 PF02472 Biopolymer transport protein ExbD/TolR B4599_00060 PF02472 Biopolymer transport protein ExbD/TolR B4599_00065 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ B4599_00075 PF13396 Phospholipase_D-nuclease N-terminal B4599_00075 PF13091 PLD-like domain B4599_00085 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain B4599_00090 PF00155 Aminotransferase class I and II B4599_00095 PF07715 TonB-dependent Receptor Plug Domain B4599_00095 PF00593 TonB dependent receptor B4599_00110 PF01609 Transposase DDE domain B4599_00110 PF05598 Transposase domain (DUF772) B4599_00115 PF01070 FMN-dependent dehydrogenase B4599_00135 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase B4599_00135 PF07055 Enoyl reductase FAD binding domain B4599_00135 PF12241 Trans-2-enoyl-CoA reductase catalytic region B4599_00145 PF00294 pfkB family carbohydrate kinase B4599_00160 PF01609 Transposase DDE domain B4599_00160 PF05598 Transposase domain (DUF772) B4599_00170 PF00005 ABC transporter B4599_00180 PF05598 Transposase domain (DUF772) B4599_00220 PF05598 Transposase domain (DUF772) B4599_00220 PF01609 Transposase DDE domain B4599_00230 PF00270 DEAD/DEAH box helicase B4599_00230 PF00271 Helicase conserved C-terminal domain B4599_00240 PF06903 VirK protein B4599_00275 PF05598 Transposase domain (DUF772) B4599_00275 PF01609 Transposase DDE domain B4599_00325 PF03150 Di-haem cytochrome c peroxidase B4599_00335 PF13460 NAD(P)H-binding B4599_00340 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) B4599_00340 PF00128 Alpha amylase, catalytic domain B4599_00350 PF00128 Alpha amylase, catalytic domain B4599_00355 PF02446 4-alpha-glucanotransferase B4599_00360 PF00128 Alpha amylase, catalytic domain B4599_00360 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) B4599_00360 PF11941 Domain of unknown function (DUF3459) B4599_00365 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) B4599_00365 PF00128 Alpha amylase, catalytic domain B4599_00365 PF02806 Alpha amylase, C-terminal all-beta domain B4599_00370 PF08323 Starch synthase catalytic domain B4599_00370 PF00534 Glycosyl transferases group 1 B4599_00375 PF00072 Response regulator receiver domain B4599_00375 PF00990 Diguanylate cyclase, GGDEF domain B4599_00385 PF05661 Protein of unknown function (DUF808) B4599_00395 PF03109 ABC1 family B4599_00405 PF13340 Putative transposase of IS4/5 family (DUF4096) B4599_00415 PF12795 Mechanosensitive ion channel porin domain B4599_00415 PF12794 Mechanosensitive ion channel inner membrane domain 1 B4599_00415 PF00924 Mechanosensitive ion channel B4599_00440 PF01464 Transglycosylase SLT domain B4599_00455 PF01311 Bacterial export proteins, family 1 B4599_00465 PF02874 ATP synthase alpha/beta family, beta-barrel domain B4599_00465 PF18269 T3SS EscN ATPase C-terminal domain B4599_00465 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain B4599_00480 PF01514 Secretory protein of YscJ/FliF family B4599_00495 PF01312 FlhB HrpN YscU SpaS Family B4599_00500 PF00771 FHIPEP family B4599_00515 PF00813 FliP family B4599_00520 PF01313 Bacterial export proteins, family 3 B4599_00570 PF05819 NolX protein B4599_00600 PF00595 PDZ domain B4599_00610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B4599_00610 PF08521 Two-component sensor kinase N-terminal B4599_00610 PF00512 His Kinase A (phospho-acceptor) domain B4599_00615 PF08338 Domain of unknown function (DUF1731) B4599_00615 PF01370 NAD dependent epimerase/dehydratase family B4599_00625 PF01609 Transposase DDE domain B4599_00625 PF05598 Transposase domain (DUF772) B4599_00650 PF00665 Integrase core domain B4599_00650 PF13936 Helix-turn-helix domain B4599_00670 PF00293 NUDIX domain B4599_00670 PF13344 Haloacid dehalogenase-like hydrolase B4599_00705 PF13533 Biotin-lipoyl like B4599_00710 PF00005 ABC transporter B4599_00735 PF08845 Toxin SymE, type I toxin-antitoxin system B4599_00750 PF03006 Haemolysin-III related B4599_00755 PF09369 Domain of unknown function (DUF1998) B4599_00755 PF00270 DEAD/DEAH box helicase B4599_00755 PF00271 Helicase conserved C-terminal domain B4599_00815 PF00310 Glutamine amidotransferases class-II B4599_00815 PF04898 Glutamate synthase central domain B4599_00815 PF01645 Conserved region in glutamate synthase B4599_00815 PF01493 GXGXG motif B4599_00820 PF07992 Pyridine nucleotide-disulphide oxidoreductase B4599_00820 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster B4599_00860 PF05598 Transposase domain (DUF772) B4599_00870 PF00356 Bacterial regulatory proteins, lacI family B4599_00900 PF02806 Alpha amylase, C-terminal all-beta domain B4599_00900 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) B4599_00900 PF00128 Alpha amylase, catalytic domain B4599_00905 PF00128 Alpha amylase, catalytic domain B4599_00905 PF16657 Maltogenic Amylase, C-terminal domain B4599_00910 PF00128 Alpha amylase, catalytic domain B4599_00910 PF11896 Domain of unknown function (DUF3416) B4599_00960 PF01078 Magnesium chelatase, subunit ChlI B4599_00960 PF13335 Magnesium chelatase, subunit ChlI C-terminal B4599_00965 PF04380 Membrane fusogenic activity B4599_00970 PF00543 Nitrogen regulatory protein P-II B4599_01005 PF17284 Spermidine synthase tetramerisation domain B4599_01010 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain B4599_01010 PF17944 Arginine decarboxylase C-terminal helical extension B4599_01010 PF17810 Arginine decarboxylase helical bundle domain B4599_01015 PF05598 Transposase domain (DUF772) B4599_01020 PF16671 Actin cross-linking domain B4599_01020 PF04717 Type VI secretion system, phage-baseplate injector B4599_01060 PF13932 GidA associated domain B4599_01060 PF01134 Glucose inhibited division protein A B4599_01075 PF00291 Pyridoxal-phosphate dependent enzyme B4599_01095 PF13649 Methyltransferase domain B4599_01105 PF12697 Alpha/beta hydrolase family B4599_01125 PF04349 Periplasmic glucan biosynthesis protein, MdoG B4599_01135 PF00265 Thymidine kinase B4599_01140 PF00580 UvrD/REP helicase N-terminal domain B4599_01140 PF13361 UvrD-like helicase C-terminal domain B4599_01155 PF04337 Protein of unknown function, DUF480 B4599_01160 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) B4599_01165 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family B4599_01170 PF04820 Tryptophan halogenase B4599_01185 PF00356 Bacterial regulatory proteins, lacI family B4599_01200 PF01553 Acyltransferase B4599_01205 PF14765 Polyketide synthase dehydratase B4599_01205 PF00550 Phosphopantetheine attachment site B4599_01205 PF00698 Acyl transferase domain B4599_01205 PF08659 KR domain B4599_01205 PF02801 Beta-ketoacyl synthase, C-terminal domain B4599_01205 PF00109 Beta-ketoacyl synthase, N-terminal domain B4599_01205 PF16197 Ketoacyl-synthetase C-terminal extension B4599_01205 PF08240 Alcohol dehydrogenase GroES-like domain B4599_01240 PF00351 Biopterin-dependent aromatic amino acid hydroxylase B4599_01245 PF01037 Lrp/AsnC ligand binding domain B4599_01255 PF13936 Helix-turn-helix domain B4599_01255 PF00665 Integrase core domain B4599_01290 PF00107 Zinc-binding dehydrogenase B4599_01290 PF08240 Alcohol dehydrogenase GroES-like domain B4599_01300 PF00150 Cellulase (glycosyl hydrolase family 5) B4599_01310 PF00150 Cellulase (glycosyl hydrolase family 5) B4599_01320 PF00150 Cellulase (glycosyl hydrolase family 5) B4599_01330 PF02810 SEC-C motif B4599_01345 PF01609 Transposase DDE domain B4599_01345 PF05598 Transposase domain (DUF772) B4599_01350 PF01263 Aldose 1-epimerase B4599_01360 PF01126 Heme oxygenase B4599_01365 PF13426 PAS domain B4599_01365 PF00360 Phytochrome region B4599_01365 PF08446 PAS fold B4599_01365 PF01590 GAF domain B4599_01410 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain B4599_01410 PF06827 Zinc finger found in FPG and IleRS B4599_01410 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain B4599_01420 PF13340 Putative transposase of IS4/5 family (DUF4096) B4599_01435 PF04333 MlaA lipoprotein B4599_01445 PF05494 MlaC protein B4599_01450 PF02470 MlaD protein B4599_01455 PF02405 Permease MlaE B4599_01460 PF00005 ABC transporter B4599_01490 PF13340 Putative transposase of IS4/5 family (DUF4096) B4599_01545 PF01011 PQQ enzyme repeat B4599_01545 PF13360 PQQ-like domain B4599_01545 PF13570 PQQ-like domain B4599_01555 PF13340 Putative transposase of IS4/5 family (DUF4096) B4599_01575 PF06165 Glycosyltransferase family 36 B4599_01575 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain B4599_01590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B4599_01590 PF00512 His Kinase A (phospho-acceptor) domain B4599_01595 PF02659 Putative manganese efflux pump B4599_01600 PF09339 IclR helix-turn-helix domain B4599_01600 PF01614 Bacterial transcriptional regulator B4599_01605 PF07690 Major Facilitator Superfamily B4599_01610 PF05336 L-rhamnose mutarotase B4599_01635 PF01432 Peptidase family M3 B4599_01650 PF00472 RF-1 domain B4599_01660 PF00849 RNA pseudouridylate synthase B4599_01670 PF03109 ABC1 family B4599_01685 PF07478 D-ala D-ala ligase C-terminus B4599_01685 PF01820 D-ala D-ala ligase N-terminus B4599_01695 PF01609 Transposase DDE domain B4599_01695 PF05598 Transposase domain (DUF772) B4599_01735 PF13340 Putative transposase of IS4/5 family (DUF4096) B4599_01790 PF02558 Ketopantoate reductase PanE/ApbA B4599_01790 PF08546 Ketopantoate reductase PanE/ApbA C terminal B4599_01800 PF01061 ABC-2 type transporter B4599_01805 PF00005 ABC transporter B4599_01810 PF01383 CpcD/allophycocyanin linker domain B4599_01810 PF00175 Oxidoreductase NAD-binding domain B4599_01815 PF01545 Cation efflux family B4599_01820 PF02583 Metal-sensitive transcriptional repressor B4599_01830 PF01381 Helix-turn-helix B4599_01840 PF00005 ABC transporter B4599_01855 PF04820 Tryptophan halogenase B4599_01875 PF00043 Glutathione S-transferase, C-terminal domain B4599_01875 PF02798 Glutathione S-transferase, N-terminal domain B4599_01880 PF00326 Prolyl oligopeptidase family B4599_01880 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region B4599_01905 PF00490 Delta-aminolevulinic acid dehydratase B4599_01920 PF03466 LysR substrate binding domain B4599_01920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B4599_01930 PF00175 Oxidoreductase NAD-binding domain B4599_01930 PF00667 FAD binding domain B4599_01930 PF00258 Flavodoxin B4599_01945 PF08501 Shikimate dehydrogenase substrate binding domain B4599_01945 PF01488 Shikimate / quinate 5-dehydrogenase B4599_01945 PF18317 Shikimate 5'-dehydrogenase C-terminal domain B4599_01955 PF13307 Helicase C-terminal domain B4599_01955 PF06733 DEAD_2 B4599_01975 PF13533 Biotin-lipoyl like B4599_01985 PF06628 Catalase-related immune-responsive B4599_01985 PF00199 Catalase B4599_02010 PF01207 Dihydrouridine synthase (Dus) B4599_02020 PF00486 Transcriptional regulatory protein, C terminal B4599_02020 PF00072 Response regulator receiver domain B4599_02025 PF00512 His Kinase A (phospho-acceptor) domain B4599_02025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B4599_02025 PF00672 HAMP domain B4599_02055 PF03099 Biotin/lipoate A/B protein ligase family B4599_02055 PF02237 Biotin protein ligase C terminal domain B4599_02055 PF08279 HTH domain B4599_02060 PF03309 Type III pantothenate kinase B4599_02075 PF02223 Thymidylate kinase B4599_02100 PF00491 Arginase family B4599_02115 PF05532 CsbD-like B4599_02120 PF00579 tRNA synthetases class I (W and Y) B4599_02125 PF00753 Metallo-beta-lactamase superfamily B4599_02155 PF00892 EamA-like transporter family B4599_02175 PF00199 Catalase B4599_02180 PF08281 Sigma-70, region 4 B4599_02180 PF04542 Sigma-70 region 2 B4599_02190 PF00883 Cytosol aminopeptidase family, catalytic domain B4599_02190 PF02789 Cytosol aminopeptidase family, N-terminal domain B4599_02200 PF01594 AI-2E family transporter B4599_02215 PF01040 UbiA prenyltransferase family B4599_02225 PF04055 Radical SAM superfamily B4599_02225 PF06968 Biotin and Thiamin Synthesis associated domain B4599_02230 PF00155 Aminotransferase class I and II B4599_02260 PF00535 Glycosyl transferase family 2 B4599_02270 PF02801 Beta-ketoacyl synthase, C-terminal domain B4599_02270 PF00109 Beta-ketoacyl synthase, N-terminal domain B4599_02275 PF05166 YcgL domain B4599_02290 PF00723 Glycosyl hydrolases family 15 B4599_02295 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain B4599_02295 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain B4599_02305 PF02254 TrkA-N domain B4599_02305 PF00999 Sodium/hydrogen exchanger family B4599_02315 PF03448 MgtE intracellular N domain B4599_02315 PF01769 Divalent cation transporter B4599_02315 PF00571 CBS domain B4599_02325 PF13607 Succinyl-CoA ligase like flavodoxin domain B4599_02325 PF00583 Acetyltransferase (GNAT) family B4599_02325 PF13380 CoA binding domain B4599_02335 PF02867 Ribonucleotide reductase, barrel domain B4599_02335 PF00317 Ribonucleotide reductase, all-alpha domain B4599_02335 PF03477 ATP cone domain B4599_02345 PF00268 Ribonucleotide reductase, small chain B4599_02365 PF01527 Transposase B4599_02370 PF13276 HTH-like domain B4599_02380 PF13276 HTH-like domain B4599_02380 PF13683 Integrase core domain B4599_02390 PF00108 Thiolase, N-terminal domain B4599_02390 PF02803 Thiolase, C-terminal domain B4599_02395 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal B4599_02395 PF00775 Dioxygenase B4599_02410 PF10397 Adenylosuccinate lyase C-terminus B4599_02410 PF00206 Lyase B4599_02415 PF12146 Serine aminopeptidase, S33 B4599_02420 PF02627 Carboxymuconolactone decarboxylase family B4599_02430 PF01614 Bacterial transcriptional regulator B4599_02430 PF09339 IclR helix-turn-helix domain B4599_02445 PF00106 short chain dehydrogenase B4599_02460 PF05746 DALR anticodon binding domain B4599_02460 PF00750 tRNA synthetases class I (R) B4599_02460 PF03485 Arginyl tRNA synthetase N terminal domain B4599_02465 PF04002 RadC-like JAB domain B4599_02470 PF02441 Flavoprotein B4599_02470 PF04127 DNA / pantothenate metabolism flavoprotein B4599_02475 PF00692 dUTPase B4599_02480 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain B4599_02480 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III B4599_02480 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II B4599_02480 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I B4599_02495 PF00535 Glycosyl transferase family 2 B4599_02500 PF01370 NAD dependent epimerase/dehydratase family B4599_02510 PF02195 ParB-like nuclease domain B4599_02510 PF17762 HTH domain found in ParB protein B4599_02515 PF13614 AAA domain B4599_02525 PF00156 Phosphoribosyl transferase domain B4599_02530 PF03372 Endonuclease/Exonuclease/phosphatase family B4599_02535 PF07690 Major Facilitator Superfamily B4599_02545 PF03702 Anhydro-N-acetylmuramic acid kinase B4599_02550 PF04225 Opacity-associated protein A LysM-like domain B4599_02550 PF01551 Peptidase family M23 B4599_02555 PF00579 tRNA synthetases class I (W and Y) B4599_02590 PF00512 His Kinase A (phospho-acceptor) domain B4599_02590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B4599_02590 PF01627 Hpt domain B4599_02590 PF00672 HAMP domain B4599_02590 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) B4599_02590 PF00072 Response regulator receiver domain B4599_02595 PF00072 Response regulator receiver domain B4599_02595 PF00486 Transcriptional regulatory protein, C terminal B4599_02620 PF13340 Putative transposase of IS4/5 family (DUF4096) B4599_02630 PF01521 Iron-sulphur cluster biosynthesis B4599_02640 PF09297 NADH pyrophosphatase zinc ribbon domain B4599_02640 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain B4599_02640 PF00293 NUDIX domain B4599_02645 PF17113 Regulatory signalling modulator protein AmpE B4599_02645 PF03186 CobD/Cbib protein B4599_02665 PF07690 Major Facilitator Superfamily B4599_02680 PF12805 FUSC-like inner membrane protein yccS B4599_02690 PF02687 FtsX-like permease family B4599_02690 PF12704 MacB-like periplasmic core domain B4599_02690 PF00005 ABC transporter B4599_02695 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain B4599_02695 PF02844 Phosphoribosylglycinamide synthetase, N domain B4599_02695 PF02843 Phosphoribosylglycinamide synthetase, C domain B4599_02705 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system B4599_02710 PF02142 MGS-like domain B4599_02710 PF01808 AICARFT/IMPCHase bienzyme B4599_02725 PF12146 Serine aminopeptidase, S33 B4599_02725 PF12147 Putative methyltransferase B4599_02735 PF12146 Serine aminopeptidase, S33 B4599_02735 PF12147 Putative methyltransferase B4599_02740 PF00782 Dual specificity phosphatase, catalytic domain B4599_02755 PF02954 Bacterial regulatory protein, Fis family B4599_02770 PF01381 Helix-turn-helix B4599_02810 PF02785 Biotin carboxylase C-terminal domain B4599_02810 PF00289 Biotin carboxylase, N-terminal domain B4599_02810 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain B4599_02820 PF00364 Biotin-requiring enzyme B4599_02825 PF01220 Dehydroquinase class II B4599_02835 PF02683 Cytochrome C biogenesis protein transmembrane region B4599_02835 PF11412 Disulphide bond corrector protein DsbC B4599_02840 PF03091 CutA1 divalent ion tolerance protein B4599_02845 PF18319 PriA DNA helicase Cys-rich region (CRR) domain B4599_02845 PF00270 DEAD/DEAH box helicase B4599_02845 PF00271 Helicase conserved C-terminal domain B4599_02845 PF17764 3′ DNA-binding domain (3′BD) B4599_02845 PF18074 Primosomal protein N C-terminal domain B4599_02865 PF01554 MatE B4599_02870 PF01343 Peptidase family S49 B4599_02895 PF01300 Telomere recombination B4599_02900 PF01131 DNA topoisomerase B4599_02900 PF13368 Topoisomerase C-terminal repeat B4599_02900 PF01751 Toprim domain B4599_02910 PF07963 Prokaryotic N-terminal methylation motif B4599_02910 PF00114 Pilin (bacterial filament) B4599_02915 PF04361 Protein of unknown function (DUF494) B4599_02920 PF02481 DNA recombination-mediator protein A B4599_02920 PF17782 DprA winged helix domain B4599_02925 PF01476 LysM domain B4599_02930 PF01327 Polypeptide deformylase B4599_02935 PF02911 Formyl transferase, C-terminal domain B4599_02935 PF00551 Formyl transferase B4599_02940 PF01029 NusB family B4599_02940 PF01189 16S rRNA methyltransferase RsmB/F B4599_02955 PF00535 Glycosyl transferase family 2 B4599_02975 PF00925 GTP cyclohydrolase II B4599_02990 PF03279 Bacterial lipid A biosynthesis acyltransferase B4599_02995 PF02580 D-Tyr-tRNA(Tyr) deacylase B4599_03000 PF00140 Sigma-70 factor, region 1.2 B4599_03000 PF04545 Sigma-70, region 4 B4599_03000 PF04542 Sigma-70 region 2 B4599_03000 PF03979 Sigma-70 factor, region 1.1 B4599_03000 PF04539 Sigma-70 region 3 B4599_03000 PF04546 Sigma-70, non-essential region B4599_03020 PF00589 Phage integrase family B4599_03040 PF07996 Type IV secretion system proteins B4599_03055 PF04610 TrbL/VirB6 plasmid conjugal transfer protein B4599_03070 PF03852 DNA mismatch endonuclease Vsr B4599_03075 PF00145 C-5 cytosine-specific DNA methylase B4599_03150 PF00005 ABC transporter B4599_03165 PF00593 TonB dependent receptor B4599_03165 PF07715 TonB-dependent Receptor Plug Domain B4599_03205 PF08240 Alcohol dehydrogenase GroES-like domain B4599_03205 PF13823 Alcohol dehydrogenase GroES-associated B4599_03205 PF00107 Zinc-binding dehydrogenase B4599_03220 PF02322 Cytochrome bd terminal oxidase subunit II B4599_03225 PF01654 Cytochrome bd terminal oxidase subunit I B4599_03240 PF02954 Bacterial regulatory protein, Fis family B4599_03240 PF00072 Response regulator receiver domain B4599_03240 PF00158 Sigma-54 interaction domain B4599_03255 PF08448 PAS fold B4599_03255 PF03705 CheR methyltransferase, all-alpha domain B4599_03255 PF01339 CheB methylesterase B4599_03255 PF01739 CheR methyltransferase, SAM binding domain B4599_03275 PF06580 Histidine kinase B4599_03275 PF02743 Cache domain B4599_03275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B4599_03275 PF00672 HAMP domain B4599_03290 PF13520 Amino acid permease B4599_03310 PF05649 Peptidase family M13 B4599_03310 PF01431 Peptidase family M13 B4599_03325 PF00248 Aldo/keto reductase family B4599_03330 PF03358 NADPH-dependent FMN reductase B4599_03340 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase B4599_03350 PF03167 Uracil DNA glycosylase superfamily B4599_03360 PF02469 Fasciclin domain B4599_03375 PF00999 Sodium/hydrogen exchanger family B4599_03380 PF00005 ABC transporter B4599_03385 PF01061 ABC-2 type transporter B4599_03405 PF04151 Bacterial pre-peptidase C-terminal domain B4599_03405 PF00082 Subtilase family B4599_03415 PF00512 His Kinase A (phospho-acceptor) domain B4599_03415 PF08448 PAS fold B4599_03415 PF13188 PAS domain B4599_03415 PF00072 Response regulator receiver domain B4599_03415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B4599_03420 PF00072 Response regulator receiver domain B4599_03420 PF00486 Transcriptional regulatory protein, C terminal B4599_03440 PF13677 Membrane MotB of proton-channel complex MotA/MotB B4599_03440 PF00691 OmpA family B4599_03445 PF01618 MotA/TolQ/ExbB proton channel family B4599_03455 PF01641 SelR domain B4599_03465 PF01037 Lrp/AsnC ligand binding domain B4599_03470 PF01266 FAD dependent oxidoreductase B4599_03475 PF00842 Alanine racemase, C-terminal domain B4599_03475 PF01168 Alanine racemase, N-terminal domain B4599_03495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B4599_03495 PF00512 His Kinase A (phospho-acceptor) domain B4599_03495 PF00989 PAS fold B4599_03510 PF07995 Glucose / Sorbosone dehydrogenase B4599_03530 PF05175 Methyltransferase small domain B4599_03530 PF08468 Methyltransferase small domain N-terminal B4599_03535 PF00849 RNA pseudouridylate synthase B4599_03535 PF01479 S4 domain B4599_03540 PF13419 Haloacid dehalogenase-like hydrolase B4599_03570 PF04461 Protein of unknown function (DUF520) B4599_03575 PF00892 EamA-like transporter family B4599_03580 PF00005 ABC transporter B4599_03580 PF09383 NIL domain B4599_03585 PF00528 Binding-protein-dependent transport system inner membrane component B4599_03590 PF03180 NLPA lipoprotein B4599_03615 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) B4599_03615 PF00364 Biotin-requiring enzyme B4599_03615 PF02817 e3 binding domain B4599_03625 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain B4599_03625 PF07992 Pyridine nucleotide-disulphide oxidoreductase B4599_03645 PF00119 ATP synthase A chain B4599_03650 PF00137 ATP synthase subunit C B4599_03655 PF00430 ATP synthase B/B' CF(0) B4599_03660 PF00213 ATP synthase delta (OSCP) subunit B4599_03665 PF00306 ATP synthase alpha/beta chain, C terminal domain B4599_03665 PF02874 ATP synthase alpha/beta family, beta-barrel domain B4599_03665 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain B4599_03670 PF00231 ATP synthase B4599_03675 PF02874 ATP synthase alpha/beta family, beta-barrel domain B4599_03675 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain B4599_03680 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain B4599_03685 PF01817 Chorismate mutase type II B4599_03700 PF00132 Bacterial transferase hexapeptide (six repeats) B4599_03700 PF14602 Hexapeptide repeat of succinyl-transferase B4599_03700 PF12804 MobA-like NTP transferase domain B4599_03735 PF00005 ABC transporter B4599_03735 PF08402 TOBE domain B4599_03740 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion B4599_03745 PF01380 SIS domain B4599_03760 PF13340 Putative transposase of IS4/5 family (DUF4096) B4599_03780 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily B4599_03785 PF05275 Copper resistance protein B precursor (CopB) B4599_03790 PF07732 Multicopper oxidase B4599_03790 PF00394 Multicopper oxidase B4599_03790 PF07731 Multicopper oxidase B4599_03805 PF01432 Peptidase family M3 B4599_03815 PF02801 Beta-ketoacyl synthase, C-terminal domain B4599_03815 PF00109 Beta-ketoacyl synthase, N-terminal domain B4599_03820 PF07977 FabA-like domain B4599_03830 PF00817 impB/mucB/samB family B4599_03830 PF11799 impB/mucB/samB family C-terminal domain B4599_03835 PF13419 Haloacid dehalogenase-like hydrolase B4599_03845 PF13185 GAF domain B4599_03860 PF01242 6-pyruvoyl tetrahydropterin synthase B4599_03870 PF00270 DEAD/DEAH box helicase B4599_03870 PF00271 Helicase conserved C-terminal domain B4599_03885 PF13417 Glutathione S-transferase, N-terminal domain B4599_03890 PF00437 Type II/IV secretion system protein B4599_03910 PF00571 CBS domain B4599_03910 PF00291 Pyridoxal-phosphate dependent enzyme B4599_03915 PF01053 Cys/Met metabolism PLP-dependent enzyme B4599_03925 PF01370 NAD dependent epimerase/dehydratase family B4599_03955 PF00872 Transposase, Mutator family B4599_03965 PF00005 ABC transporter B4599_03975 PF00766 Electron transfer flavoprotein FAD-binding domain B4599_03975 PF01012 Electron transfer flavoprotein domain B4599_03980 PF01012 Electron transfer flavoprotein domain B4599_03990 PF00483 Nucleotidyl transferase B4599_03995 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase B4599_04000 PF04321 RmlD substrate binding domain B4599_04005 PF01050 Mannose-6-phosphate isomerase B4599_04005 PF00483 Nucleotidyl transferase B4599_04010 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III B4599_04010 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I B4599_04010 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II B4599_04010 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain B4599_04015 PF01144 Coenzyme A transferase B4599_04020 PF01144 Coenzyme A transferase B4599_04025 PF05045 Rhamnan synthesis protein F B4599_04025 PF14307 Glycosyltransferase WbsX B4599_04050 PF03886 ABC-type transport auxiliary lipoprotein component B4599_04050 PF02470 MlaD protein B4599_04055 PF00005 ABC transporter B4599_04060 PF02405 Permease MlaE B4599_04070 PF00816 H-NS histone family B4599_04075 PF04073 Aminoacyl-tRNA editing domain B4599_04075 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) B4599_04075 PF03129 Anticodon binding domain B4599_04085 PF01066 CDP-alcohol phosphatidyltransferase B4599_04115 PF01609 Transposase DDE domain B4599_04115 PF05598 Transposase domain (DUF772) B4599_04125 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain B4599_04125 PF01464 Transglycosylase SLT domain B4599_04160 PF05598 Transposase domain (DUF772) B4599_04170 PF00133 tRNA synthetases class I (I, L, M and V) B4599_04170 PF08264 Anticodon-binding domain of tRNA B4599_04170 PF10458 Valyl tRNA synthetase tRNA binding arm B4599_04185 PF00883 Cytosol aminopeptidase family, catalytic domain B4599_04185 PF02789 Cytosol aminopeptidase family, N-terminal domain B4599_04195 PF03739 Lipopolysaccharide export system permease LptF/LptG B4599_04210 PF02899 Phage integrase, N-terminal SAM-like domain B4599_04210 PF00589 Phage integrase family B4599_04215 PF10411 Disulfide bond isomerase protein N-terminus B4599_04215 PF13098 Thioredoxin-like domain B4599_04225 PF02769 AIR synthase related protein, C-terminal domain B4599_04225 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain B4599_04225 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal B4599_04235 PF03895 YadA-like membrane anchor domain B4599_04235 PF05658 Head domain of trimeric autotransporter adhesin B4599_04235 PF05662 Coiled stalk of trimeric autotransporter adhesin B4599_04235 PF13018 Extended Signal Peptide of Type V secretion system B4599_04250 PF04151 Bacterial pre-peptidase C-terminal domain B4599_04250 PF00082 Subtilase family B4599_04255 PF00437 Type II/IV secretion system protein B4599_04255 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain B4599_04265 PF00482 Type II secretion system (T2SS), protein F B4599_04270 PF08334 Type II secretion system (T2SS), protein G B4599_04275 PF12019 Type II transport protein GspH B4599_04280 PF07963 Prokaryotic N-terminal methylation motif B4599_04290 PF03934 Type II secretion system (T2SS), protein K B4599_04295 PF05137 Fimbrial assembly protein (PilN) B4599_04300 PF10741 Type II secretion system (T2SS), protein M subtype b B4599_04310 PF03958 Bacterial type II/III secretion system short domain B4599_04310 PF00263 Bacterial type II and III secretion system protein B4599_04325 PF07702 UTRA domain B4599_04325 PF00392 Bacterial regulatory proteins, gntR family B4599_04340 PF00593 TonB dependent receptor B4599_04340 PF07715 TonB-dependent Receptor Plug Domain B4599_04370 PF09827 CRISPR associated protein Cas2 B4599_04375 PF01867 CRISPR associated protein Cas1 B4599_04395 PF09704 CRISPR-associated protein (Cas_Cas5) B4599_04415 PF02545 Maf-like protein B4599_04420 PF02620 Large ribosomal RNA subunit accumulation protein YceD B4599_04425 PF01783 Ribosomal L32p protein family B4599_04430 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III B4599_04430 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal B4599_04440 PF00698 Acyl transferase domain B4599_04450 PF00550 Phosphopantetheine attachment site B4599_04455 PF02801 Beta-ketoacyl synthase, C-terminal domain B4599_04455 PF00109 Beta-ketoacyl synthase, N-terminal domain B4599_04460 PF04715 Anthranilate synthase component I, N terminal region B4599_04460 PF00425 chorismate binding enzyme B4599_04465 PF02618 YceG-like family B4599_04470 PF09115 DNA polymerase III, delta subunit, C terminal B4599_04495 PF06506 Propionate catabolism activator B4599_04495 PF02954 Bacterial regulatory protein, Fis family B4599_04495 PF00158 Sigma-54 interaction domain B4599_04505 PF00285 Citrate synthase, C-terminal domain B4599_04510 PF00330 Aconitase family (aconitate hydratase) B4599_04510 PF00694 Aconitase C-terminal domain B4599_04520 PF04303 PrpF protein B4599_04525 PF00593 TonB dependent receptor B4599_04525 PF07715 TonB-dependent Receptor Plug Domain B4599_04575 PF13936 Helix-turn-helix domain B4599_04575 PF00665 Integrase core domain B4599_04585 PF08534 Redoxin B4599_04595 PF01556 DnaJ C terminal domain B4599_04595 PF00226 DnaJ domain B4599_04600 PF00072 Response regulator receiver domain B4599_04605 PF12221 Bacterial membrane protein N terminal B4599_04605 PF01145 SPFH domain / Band 7 family B4599_04610 PF01145 SPFH domain / Band 7 family B4599_04620 PF00709 Adenylosuccinate synthetase B4599_04625 PF01433 Peptidase family M1 domain B4599_04625 PF11838 ERAP1-like C-terminal domain B4599_04635 PF05598 Transposase domain (DUF772) B4599_04670 PF03279 Bacterial lipid A biosynthesis acyltransferase B4599_04675 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) B4599_04680 PF02321 Outer membrane efflux protein B4599_04705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B4599_04710 PF00330 Aconitase family (aconitate hydratase) B4599_04715 PF00694 Aconitase C-terminal domain B4599_04725 PF00180 Isocitrate/isopropylmalate dehydrogenase B4599_04730 PF00682 HMGL-like B4599_04730 PF08502 LeuA allosteric (dimerisation) domain B4599_04735 PF00291 Pyridoxal-phosphate dependent enzyme B4599_04745 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain B4599_04745 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain B4599_04745 PF00205 Thiamine pyrophosphate enzyme, central domain B4599_04750 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain B4599_04750 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain B4599_04760 PF13667 ThiC-associated domain B4599_04760 PF01964 Radical SAM ThiC family B4599_04765 PF00486 Transcriptional regulatory protein, C terminal B4599_04765 PF18500 CadC C-terminal domain 1 B4599_04770 PF12833 Helix-turn-helix domain B4599_04775 PF00593 TonB dependent receptor B4599_04775 PF07715 TonB-dependent Receptor Plug Domain B4599_04790 PF00719 Inorganic pyrophosphatase B4599_04825 PF00365 Phosphofructokinase B4599_04835 PF01225 Mur ligase family, catalytic domain B4599_04835 PF08245 Mur ligase middle domain B4599_04835 PF02875 Mur ligase family, glutamate ligase domain B4599_04845 PF01062 Bestrophin, RFP-TM, chloride channel B4599_04860 PF02798 Glutathione S-transferase, N-terminal domain B4599_04860 PF00043 Glutathione S-transferase, C-terminal domain B4599_04865 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain B4599_04865 PF00056 lactate/malate dehydrogenase, NAD binding domain B4599_04870 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD B4599_04895 PF01474 Class-II DAHP synthetase family B4599_04905 PF02600 Disulfide bond formation protein DsbB B4599_04920 PF05598 Transposase domain (DUF772) B4599_04990 PF01527 Transposase B4599_05025 PF13340 Putative transposase of IS4/5 family (DUF4096) B4599_05040 PF01609 Transposase DDE domain B4599_05040 PF05598 Transposase domain (DUF772) B4599_05060 PF13340 Putative transposase of IS4/5 family (DUF4096) B4599_05065 PF03009 Glycerophosphoryl diester phosphodiesterase family B4599_05090 PF18324 Hypothetical protein TT1725 B4599_05090 PF00180 Isocitrate/isopropylmalate dehydrogenase B4599_05140 PF05698 Bacterial trigger factor protein (TF) C-terminus B4599_05140 PF05697 Bacterial trigger factor protein (TF) B4599_05145 PF00574 Clp protease B4599_05150 PF10431 C-terminal, D2-small domain, of ClpB protein B4599_05150 PF06689 ClpX C4-type zinc finger B4599_05150 PF07724 AAA domain (Cdc48 subfamily) B4599_05155 PF02190 ATP-dependent protease La (LON) substrate-binding domain B4599_05155 PF05362 Lon protease (S16) C-terminal proteolytic domain B4599_05155 PF00004 ATPase family associated with various cellular activities (AAA) B4599_05160 PF00216 Bacterial DNA-binding protein B4599_05185 PF01476 LysM domain B4599_05185 PF05257 CHAP domain B4599_05190 PF16123 Hydroxyacylglutathione hydrolase C-terminus B4599_05190 PF00753 Metallo-beta-lactamase superfamily B4599_05200 PF00075 RNase H B4599_05205 PF00929 Exonuclease B4599_05285 PF13356 Arm DNA-binding domain B4599_05285 PF00589 Phage integrase family B4599_05295 PF01075 Glycosyltransferase family 9 (heptosyltransferase) B4599_05305 PF12706 Beta-lactamase superfamily domain B4599_05305 PF00753 Metallo-beta-lactamase superfamily B4599_05310 PF04055 Radical SAM superfamily B4599_05310 PF06463 Molybdenum Cofactor Synthesis C B4599_05320 PF01967 MoaC family B4599_05325 PF02597 ThiS family B4599_05330 PF02391 MoaE protein B4599_05345 PF12170 DNA polymerase III tau subunit V interacting with alpha B4599_05345 PF12169 DNA polymerase III subunits gamma and tau domain III B4599_05345 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding B4599_05350 PF02575 YbaB/EbfC DNA-binding family B4599_05355 PF02132 RecR protein B4599_05355 PF13662 Toprim domain B4599_05360 PF01230 HIT domain B4599_05370 PF13559 Domain of unknown function (DUF4129) B4599_05370 PF11992 Domain of unknown function (DUF3488) B4599_05370 PF01841 Transglutaminase-like superfamily B4599_05380 PF07726 ATPase family associated with various cellular activities (AAA) B4599_05380 PF17863 AAA lid domain B4599_05400 PF01327 Polypeptide deformylase B4599_05450 PF05598 Transposase domain (DUF772) B4599_05450 PF01609 Transposase DDE domain B4599_05475 PF00462 Glutaredoxin B4599_05480 PF01522 Polysaccharide deacetylase B4599_05505 PF03193 RsgA GTPase B4599_05520 PF00128 Alpha amylase, catalytic domain B4599_05540 PF00356 Bacterial regulatory proteins, lacI family B4599_05545 PF00106 short chain dehydrogenase B4599_05550 PF03600 Citrate transporter B4599_05560 PF00072 Response regulator receiver domain B4599_05560 PF00486 Transcriptional regulatory protein, C terminal B4599_05565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B4599_05565 PF08521 Two-component sensor kinase N-terminal B4599_05565 PF00512 His Kinase A (phospho-acceptor) domain B4599_05575 PF00196 Bacterial regulatory proteins, luxR family B4599_05575 PF00072 Response regulator receiver domain B4599_05590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B4599_05590 PF03466 LysR substrate binding domain B4599_05600 PF07690 Major Facilitator Superfamily B4599_05605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B4599_05605 PF00512 His Kinase A (phospho-acceptor) domain B4599_05620 PF00375 Sodium:dicarboxylate symporter family B4599_05625 PF01515 Phosphate acetyl/butaryl transferase B4599_05625 PF00390 Malic enzyme, N-terminal domain B4599_05625 PF03949 Malic enzyme, NAD binding domain B4599_05650 PF02581 Thiamine monophosphate synthase B4599_05655 PF00301 Rubredoxin B4599_05660 PF13369 Transglutaminase-like superfamily B4599_05670 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) B4599_05680 PF01812 5-formyltetrahydrofolate cyclo-ligase family B4599_05690 PF05164 Cell division protein ZapA B4599_05700 PF03695 Uncharacterised protein family (UPF0149) B4599_05705 PF00557 Metallopeptidase family M24 B4599_05705 PF05195 Aminopeptidase P, N-terminal domain B4599_05720 PF13340 Putative transposase of IS4/5 family (DUF4096) B4599_05730 PF00557 Metallopeptidase family M24 B4599_05745 PF04055 Radical SAM superfamily B4599_05745 PF06969 HemN C-terminal domain B4599_05750 PF01725 Ham1 family B4599_05760 PF03725 3' exoribonuclease family, domain 2 B4599_05760 PF01138 3' exoribonuclease family, domain 1 B4599_05765 PF08340 Domain of unknown function (DUF1732) B4599_05765 PF03755 YicC-like family, N-terminal region B4599_05770 PF00625 Guanylate kinase B4599_05785 PF01192 RNA polymerase Rpb6 B4599_05790 PF02824 TGS domain B4599_05790 PF04607 Region found in RelA / SpoT proteins B4599_05790 PF13291 ACT domain B4599_05795 PF01042 Endoribonuclease L-PSP B4599_05800 PF00271 Helicase conserved C-terminal domain B4599_05800 PF00270 DEAD/DEAH box helicase B4599_05800 PF17191 RecG wedge domain B4599_05805 PF01156 Inosine-uridine preferring nucleoside hydrolase B4599_05810 PF01197 Ribosomal protein L31 B4599_05815 PF00285 Citrate synthase, C-terminal domain B4599_05830 PF00912 Transglycosylase B4599_05830 PF00905 Penicillin binding protein transpeptidase domain B4599_05830 PF17092 Penicillin-binding protein OB-like domain B4599_05855 PF07660 Secretin and TonB N terminus short domain B4599_05855 PF11741 AMIN domain B4599_05855 PF03958 Bacterial type II/III secretion system short domain B4599_05855 PF00263 Bacterial type II and III secretion system protein B4599_05880 PF07726 ATPase family associated with various cellular activities (AAA) B4599_05880 PF17863 AAA lid domain B4599_05900 PF07584 Aerotolerance regulator N-terminal B4599_05900 PF00092 von Willebrand factor type A domain B4599_05920 PF00375 Sodium:dicarboxylate symporter family B4599_05925 PF02780 Transketolase, C-terminal domain B4599_05925 PF02779 Transketolase, pyrimidine binding domain B4599_05925 PF00456 Transketolase, thiamine diphosphate binding domain B4599_05930 PF00593 TonB dependent receptor B4599_05930 PF07715 TonB-dependent Receptor Plug Domain B4599_05935 PF04225 Opacity-associated protein A LysM-like domain B4599_05935 PF01551 Peptidase family M23 B4599_05940 PF01476 LysM domain B4599_05940 PF03734 L,D-transpeptidase catalytic domain B4599_05965 PF00501 AMP-binding enzyme B4599_05990 PF00486 Transcriptional regulatory protein, C terminal B4599_05990 PF00072 Response regulator receiver domain B4599_05995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B4599_05995 PF00512 His Kinase A (phospho-acceptor) domain B4599_05995 PF08521 Two-component sensor kinase N-terminal B4599_06015 PF03459 TOBE domain B4599_06015 PF00005 ABC transporter B4599_06020 PF00528 Binding-protein-dependent transport system inner membrane component B4599_06030 PF04273 Putative phosphatase (DUF442) B4599_06030 PF00753 Metallo-beta-lactamase superfamily B4599_06065 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain B4599_06065 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain B4599_06075 PF13340 Putative transposase of IS4/5 family (DUF4096) B4599_06090 PF00672 HAMP domain B4599_06090 PF00512 His Kinase A (phospho-acceptor) domain B4599_06090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B4599_06095 PF00072 Response regulator receiver domain B4599_06095 PF00486 Transcriptional regulatory protein, C terminal B4599_06105 PF18030 RimK PreATP-grasp domain B4599_06105 PF08443 RimK-like ATP-grasp domain B4599_06145 PF00520 Ion transport protein B4599_06145 PF00027 Cyclic nucleotide-binding domain B4599_06150 PF00202 Aminotransferase class-III B4599_06165 PF01593 Flavin containing amine oxidoreductase B4599_06170 PF13442 Cytochrome C oxidase, cbb3-type, subunit III B4599_06170 PF00034 Cytochrome c B4599_06185 PF00127 Copper binding proteins, plastocyanin/azurin family B4599_06195 PF00202 Aminotransferase class-III B4599_06215 PF00665 Integrase core domain B4599_06215 PF13333 Integrase core domain B4599_06215 PF13276 HTH-like domain B4599_06225 PF03377 TAL effector repeat B4599_06240 PF03377 TAL effector repeat B4599_06260 PF03377 TAL effector repeat B4599_06275 PF03377 TAL effector repeat B4599_06295 PF01208 Uroporphyrinogen decarboxylase (URO-D) B4599_06305 PF01761 3-dehydroquinate synthase B4599_06310 PF01202 Shikimate kinase B4599_06315 PF01243 Pyridoxamine 5'-phosphate oxidase B4599_06315 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region B4599_06325 PF04012 PspA/IM30 family B4599_06350 PF03738 Glutathionylspermidine synthase preATP-grasp B4599_06380 PF00376 MerR family regulatory protein B4599_06380 PF09278 MerR, DNA binding B4599_06415 PF12706 Beta-lactamase superfamily domain B4599_06435 PF00324 Amino acid permease B4599_06440 PF00196 Bacterial regulatory proteins, luxR family B4599_06445 PF00561 alpha/beta hydrolase fold B4599_06455 PF00324 Amino acid permease B4599_06470 PF01654 Cytochrome bd terminal oxidase subunit I B4599_06475 PF02322 Cytochrome bd terminal oxidase subunit II B4599_06480 PF00756 Putative esterase B4599_06485 PF01769 Divalent cation transporter B4599_06485 PF00571 CBS domain B4599_06485 PF03448 MgtE intracellular N domain B4599_06495 PF02896 PEP-utilising enzyme, TIM barrel domain B4599_06495 PF00391 PEP-utilising enzyme, mobile domain B4599_06495 PF05524 PEP-utilising enzyme, N-terminal B4599_06500 PF00381 PTS HPr component phosphorylation site B4599_06510 PF03668 P-loop ATPase protein family B4599_06515 PF07475 HPr Serine kinase C-terminal domain B4599_06515 PF02603 HPr Serine kinase N terminus B4599_06520 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 B4599_06525 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein B4599_06530 PF04552 Sigma-54, DNA binding domain B4599_06530 PF00309 Sigma-54 factor, Activator interacting domain (AID) B4599_06530 PF04963 Sigma-54 factor, core binding domain B4599_06535 PF00005 ABC transporter B4599_06540 PF03968 OstA-like protein B4599_06555 PF00571 CBS domain B4599_06555 PF01380 SIS domain B4599_06560 PF01722 BolA-like protein B4599_06565 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) B4599_06590 PF00551 Formyl transferase B4599_06605 PF00586 AIR synthase related protein, N-terminal domain B4599_06605 PF02769 AIR synthase related protein, C-terminal domain B4599_06615 PF01594 AI-2E family transporter B4599_06620 PF00308 Bacterial dnaA protein B4599_06625 PF00483 Nucleotidyl transferase B4599_06630 PF01636 Phosphotransferase enzyme family B4599_06645 PF07687 Peptidase dimerisation domain B4599_06645 PF01546 Peptidase family M20/M25/M40 B4599_06685 PF06964 Alpha-L-arabinofuranosidase C-terminal domain B4599_06690 PF01263 Aldose 1-epimerase B4599_06695 PF01578 Cytochrome C assembly protein B4599_06705 PF00448 SRP54-type protein, GTPase domain B4599_06705 PF02881 SRP54-type protein, helical bundle domain B4599_06705 PF02978 Signal peptide binding domain B4599_06720 PF03060 Nitronate monooxygenase B4599_06730 PF00886 Ribosomal protein S16 B4599_06735 PF01782 RimM N-terminal domain B4599_06735 PF05239 PRC-barrel domain B4599_06740 PF01746 tRNA (Guanine-1)-methyltransferase B4599_06745 PF01245 Ribosomal protein L19 B4599_06755 PF01554 MatE B4599_06760 PF01479 S4 domain B4599_06785 PF01541 GIY-YIG catalytic domain B4599_06790 PF02861 Clp amino terminal domain, pathogenicity island component B4599_06790 PF10431 C-terminal, D2-small domain, of ClpB protein B4599_06790 PF00004 ATPase family associated with various cellular activities (AAA) B4599_06790 PF07724 AAA domain (Cdc48 subfamily) B4599_06790 PF17871 AAA lid domain B4599_06815 PF00593 TonB dependent receptor B4599_06815 PF07715 TonB-dependent Receptor Plug Domain B4599_06840 PF12557 Cob(I)alamin adenosyltransferase N terminal B4599_06840 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP B4599_06850 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase B4599_06855 PF02277 Phosphoribosyltransferase B4599_06865 PF02654 Cobalamin-5-phosphate synthase B4599_06875 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain B4599_06875 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain B4599_06885 PF07690 Major Facilitator Superfamily B4599_06890 PF04183 IucA / IucC family B4599_06890 PF06276 Ferric iron reductase FhuF-like transporter B4599_06900 PF07660 Secretin and TonB N terminus short domain B4599_06900 PF07715 TonB-dependent Receptor Plug Domain B4599_06900 PF00593 TonB dependent receptor B4599_06915 PF00999 Sodium/hydrogen exchanger family B4599_06915 PF02254 TrkA-N domain B4599_06925 PF07715 TonB-dependent Receptor Plug Domain B4599_06925 PF00593 TonB dependent receptor B4599_06930 PF07715 TonB-dependent Receptor Plug Domain B4599_06930 PF00593 TonB dependent receptor B4599_06945 PF07715 TonB-dependent Receptor Plug Domain B4599_06945 PF00593 TonB dependent receptor B4599_06950 PF00005 ABC transporter B4599_06950 PF12848 ABC transporter B4599_06965 PF03466 LysR substrate binding domain B4599_06965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B4599_06975 PF07859 alpha/beta hydrolase fold B4599_06975 PF13472 GDSL-like Lipase/Acylhydrolase family B4599_06995 PF12833 Helix-turn-helix domain B4599_07000 PF00183 Hsp90 protein B4599_07000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B4599_07025 PF00872 Transposase, Mutator family B4599_07030 PF00120 Glutamine synthetase, catalytic domain B4599_07035 PF04204 Homoserine O-succinyltransferase B4599_07040 PF01810 LysE type translocator B4599_07045 PF07722 Peptidase C26 B4599_07055 PF01053 Cys/Met metabolism PLP-dependent enzyme B4599_07085 PF05598 Transposase domain (DUF772) B4599_07085 PF01609 Transposase DDE domain B4599_07090 PF00355 Rieske [2Fe-2S] domain B4599_07105 PF00266 Aminotransferase class-V B4599_07110 PF01458 Uncharacterized protein family (UPF0051) B4599_07115 PF00005 ABC transporter B4599_07120 PF01458 Uncharacterized protein family (UPF0051) B4599_07125 PF02082 Transcriptional regulator B4599_07145 PF01965 DJ-1/PfpI family B4599_07180 PF03807 NADP oxidoreductase coenzyme F420-dependent B4599_07180 PF14748 Pyrroline-5-carboxylate reductase dimerisation B4599_07185 PF01168 Alanine racemase, N-terminal domain B4599_07190 PF00437 Type II/IV secretion system protein B4599_07195 PF00437 Type II/IV secretion system protein B4599_07215 PF00958 GMP synthase C terminal domain B4599_07215 PF00117 Glutamine amidotransferase class-I B4599_07215 PF03352 Methyladenine glycosylase B4599_07215 PF13302 Acetyltransferase (GNAT) domain B4599_07215 PF13673 Acetyltransferase (GNAT) domain B4599_07225 PF02622 Uncharacterized ACR, COG1678 B4599_07230 PF03652 Holliday junction resolvase B4599_07235 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain B4599_07235 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain B4599_07245 PF02566 OsmC-like protein B4599_07255 PF02567 Phenazine biosynthesis-like protein B4599_07265 PF00696 Amino acid kinase family B4599_07265 PF01842 ACT domain B4599_07280 PF08245 Mur ligase middle domain B4599_07295 PF00348 Polyprenyl synthetase B4599_07300 PF00436 Single-strand binding protein family B4599_07305 PF00990 Diguanylate cyclase, GGDEF domain B4599_07305 PF00563 EAL domain B4599_07305 PF00360 Phytochrome region B4599_07305 PF01590 GAF domain B4599_07345 PF04328 Selenoprotein, putative B4599_07350 PF02554 Carbon starvation protein CstA B4599_07350 PF13722 5TM C-terminal transporter carbon starvation CstA B4599_07355 PF02678 Pirin B4599_07355 PF05726 Pirin C-terminal cupin domain B4599_07365 PF04717 Type VI secretion system, phage-baseplate injector B4599_07385 PF04717 Type VI secretion system, phage-baseplate injector B4599_07430 PF02678 Pirin B4599_07430 PF05726 Pirin C-terminal cupin domain B4599_07440 PF04493 Endonuclease V B4599_07445 PF00300 Histidine phosphatase superfamily (branch 1) B4599_07460 PF01431 Peptidase family M13 B4599_07460 PF05649 Peptidase family M13 B4599_07465 PF13091 PLD-like domain B4599_07470 PF01339 CheB methylesterase B4599_07470 PF00072 Response regulator receiver domain B4599_07475 PF01739 CheR methyltransferase, SAM binding domain B4599_07475 PF03705 CheR methyltransferase, all-alpha domain B4599_07480 PF13426 PAS domain B4599_07480 PF00990 Diguanylate cyclase, GGDEF domain B4599_07480 PF00563 EAL domain B4599_07485 PF01584 CheW-like domain B4599_07490 PF02203 Tar ligand binding domain homologue B4599_07490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain B4599_07490 PF00672 HAMP domain B4599_07495 PF01584 CheW-like domain B4599_07495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B4599_07495 PF02895 Signal transducing histidine kinase, homodimeric domain B4599_07495 PF01627 Hpt domain B4599_07495 PF09078 CheY binding B4599_07505 PF03461 TRCF domain B4599_07505 PF00271 Helicase conserved C-terminal domain B4599_07505 PF00270 DEAD/DEAH box helicase B4599_07505 PF17757 UvrB interaction domain B4599_07505 PF02559 CarD-like/TRCF domain B4599_07520 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ B4599_07535 PF01609 Transposase DDE domain B4599_07535 PF05598 Transposase domain (DUF772) B4599_07545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B4599_07545 PF00512 His Kinase A (phospho-acceptor) domain B4599_07545 PF00672 HAMP domain B4599_07565 PF05598 Transposase domain (DUF772) B4599_07565 PF01609 Transposase DDE domain B4599_07585 PF01609 Transposase DDE domain B4599_07585 PF05598 Transposase domain (DUF772) B4599_07620 PF00749 tRNA synthetases class I (E and Q), catalytic domain B4599_07625 PF01475 Ferric uptake regulator family B4599_07660 PF00313 'Cold-shock' DNA-binding domain B4599_07675 PF00899 ThiF family B4599_07680 PF01026 TatD related DNase B4599_07695 PF02770 Acyl-CoA dehydrogenase, middle domain B4599_07695 PF00441 Acyl-CoA dehydrogenase, C-terminal domain B4599_07695 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B4599_07705 PF13417 Glutathione S-transferase, N-terminal domain B4599_07710 PF13537 Glutamine amidotransferase domain B4599_07710 PF00733 Asparagine synthase B4599_07715 PF03358 NADPH-dependent FMN reductase B4599_07720 PF03796 DnaB-like helicase C terminal domain B4599_07720 PF00772 DnaB-like helicase N terminal domain B4599_07725 PF00875 DNA photolyase B4599_07725 PF03441 FAD binding domain of DNA photolyase B4599_07740 PF00691 OmpA family B4599_07740 PF05736 OprF membrane domain B4599_07760 PF07715 TonB-dependent Receptor Plug Domain B4599_07760 PF00593 TonB dependent receptor B4599_07780 PF08240 Alcohol dehydrogenase GroES-like domain B4599_07780 PF00107 Zinc-binding dehydrogenase B4599_07785 PF00654 Voltage gated chloride channel B4599_07795 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain B4599_07795 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain B4599_07800 PF02805 Metal binding domain of Ada B4599_07800 PF12833 Helix-turn-helix domain B4599_07800 PF06029 AlkA N-terminal domain B4599_07800 PF00730 HhH-GPD superfamily base excision DNA repair protein B4599_07845 PF04539 Sigma-70 region 3 B4599_07845 PF04545 Sigma-70, region 4 B4599_07845 PF04542 Sigma-70 region 2 B4599_07850 PF00271 Helicase conserved C-terminal domain B4599_07850 PF03880 DbpA RNA binding domain B4599_07850 PF00270 DEAD/DEAH box helicase B4599_07855 PF00990 Diguanylate cyclase, GGDEF domain B4599_07855 PF08448 PAS fold B4599_07855 PF00563 EAL domain B4599_07860 PF00849 RNA pseudouridylate synthase B4599_07860 PF01479 S4 domain B4599_07885 PF03737 Aldolase/RraA B4599_07890 PF00144 Beta-lactamase B4599_07895 PF00999 Sodium/hydrogen exchanger family B4599_07900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B4599_07900 PF00512 His Kinase A (phospho-acceptor) domain B4599_07900 PF00672 HAMP domain B4599_07905 PF00486 Transcriptional regulatory protein, C terminal B4599_07905 PF00072 Response regulator receiver domain B4599_07910 PF02321 Outer membrane efflux protein B4599_07925 PF00873 AcrB/AcrD/AcrF family B4599_07935 PF00005 ABC transporter B4599_07935 PF00664 ABC transporter transmembrane region B4599_07945 PF13340 Putative transposase of IS4/5 family (DUF4096) B4599_07965 PF01609 Transposase DDE domain B4599_07965 PF05598 Transposase domain (DUF772) B4599_07980 PF05598 Transposase domain (DUF772) B4599_07980 PF01609 Transposase DDE domain B4599_08010 PF01121 Dephospho-CoA kinase B4599_08015 PF06750 Bacterial Peptidase A24 N-terminal domain B4599_08015 PF01478 Type IV leader peptidase family B4599_08020 PF00482 Type II secretion system (T2SS), protein F B4599_08025 PF00114 Pilin (bacterial filament) B4599_08025 PF07963 Prokaryotic N-terminal methylation motif B4599_08030 PF08019 Phosphoethanolamine transferase EptA/EptB B4599_08030 PF00884 Sulfatase B4599_08045 PF00437 Type II/IV secretion system protein B4599_08045 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain B4599_08050 PF18543 Intracellular delivery domain B4599_08050 PF02661 Fic/DOC family B4599_08065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B4599_08065 PF00512 His Kinase A (phospho-acceptor) domain B4599_08070 PF00549 CoA-ligase B4599_08070 PF08442 ATP-grasp domain B4599_08075 PF02629 CoA binding domain B4599_08075 PF00549 CoA-ligase B4599_08090 PF00795 Carbon-nitrogen hydrolase B4599_08090 PF02540 NAD synthase B4599_08095 PF13525 Outer membrane lipoprotein B4599_08100 PF00849 RNA pseudouridylate synthase B4599_08120 PF00982 Glycosyltransferase family 20 B4599_08125 PF00723 Glycosyl hydrolases family 15 B4599_08130 PF02358 Trehalose-phosphatase B4599_08140 PF00593 TonB dependent receptor B4599_08140 PF07715 TonB-dependent Receptor Plug Domain B4599_08170 PF04377 Arginine-tRNA-protein transferase, C terminus B4599_08170 PF04376 Arginine-tRNA-protein transferase, N terminus B4599_08205 PF00378 Enoyl-CoA hydratase/isomerase B4599_08220 PF00005 ABC transporter B4599_08220 PF17755 UvrA DNA-binding domain B4599_08220 PF17760 UvrA interaction domain B4599_08225 PF00829 Ribosomal prokaryotic L21 protein B4599_08230 PF01016 Ribosomal L27 protein B4599_08235 PF01926 50S ribosome-binding GTPase B4599_08235 PF01018 GTP1/OBG B4599_08240 PF01649 Ribosomal protein S20 B4599_08245 PF03023 Lipid II flippase MurJ B4599_08250 PF01687 Riboflavin kinase B4599_08250 PF06574 FAD synthetase B4599_08255 PF08264 Anticodon-binding domain of tRNA B4599_08255 PF00133 tRNA synthetases class I (I, L, M and V) B4599_08255 PF06827 Zinc finger found in FPG and IleRS B4599_08260 PF01252 Signal peptidase (SPase) II B4599_08265 PF02401 LytB protein B4599_08275 PF06481 COX Aromatic Rich Motif B4599_08275 PF00116 Cytochrome C oxidase subunit II, periplasmic domain B4599_08280 PF00115 Cytochrome C and Quinol oxidase polypeptide I B4599_08285 PF00510 Cytochrome c oxidase subunit III B4599_08290 PF03626 Prokaryotic Cytochrome C oxidase subunit IV B4599_08300 PF04717 Type VI secretion system, phage-baseplate injector B4599_08310 PF14220 Domain of unknown function (DUF4329) B4599_08310 PF03527 RHS protein B4599_08310 PF05593 RHS Repeat B4599_08320 PF14220 Domain of unknown function (DUF4329) B4599_08320 PF03527 RHS protein B4599_08320 PF05593 RHS Repeat B4599_08350 PF01624 MutS domain I B4599_08350 PF05192 MutS domain III B4599_08350 PF05190 MutS family domain IV B4599_08350 PF00488 MutS domain V B4599_08350 PF05188 MutS domain II B4599_08370 PF18073 Rubredoxin metal binding domain B4599_08390 PF04185 Phosphoesterase family B4599_08390 PF05506 Domain of unknown function (DUF756) B4599_08395 PF04185 Phosphoesterase family B4599_08395 PF05506 Domain of unknown function (DUF756) B4599_08400 PF04185 Phosphoesterase family B4599_08400 PF05506 Domain of unknown function (DUF756) B4599_08420 PF02938 GAD domain B4599_08420 PF00152 tRNA synthetases class II (D, K and N) B4599_08420 PF01336 OB-fold nucleic acid binding domain B4599_08435 PF01709 Transcriptional regulator B4599_08440 PF02075 Crossover junction endodeoxyribonuclease RuvC B4599_08445 PF01330 RuvA N terminal domain B4599_08445 PF07499 RuvA, C-terminal domain B4599_08450 PF02705 K+ potassium transporter B4599_08455 PF17864 RuvB AAA lid domain B4599_08455 PF05491 RuvB C-terminal winged helix domain B4599_08455 PF05496 Holliday junction DNA helicase RuvB P-loop domain B4599_08460 PF03061 Thioesterase superfamily B4599_08465 PF01618 MotA/TolQ/ExbB proton channel family B4599_08470 PF02472 Biopolymer transport protein ExbD/TolR B4599_08480 PF07676 WD40-like Beta Propeller Repeat B4599_08480 PF04052 TolB amino-terminal domain B4599_08485 PF00691 OmpA family B4599_08495 PF04055 Radical SAM superfamily B4599_08500 PF00849 RNA pseudouridylate synthase B4599_08500 PF01479 S4 domain B4599_08545 PF13340 Putative transposase of IS4/5 family (DUF4096) B4599_08555 PF01609 Transposase DDE domain B4599_08555 PF05598 Transposase domain (DUF772) B4599_08570 PF06508 Queuosine biosynthesis protein QueC B4599_08595 PF00271 Helicase conserved C-terminal domain B4599_08595 PF00270 DEAD/DEAH box helicase B4599_08595 PF00570 HRDC domain B4599_08595 PF16124 RecQ zinc-binding B4599_08595 PF09382 RQC domain B4599_08605 PF00210 Ferritin-like domain B4599_08610 PF04408 Helicase associated domain (HA2) B4599_08610 PF11898 Domain of unknown function (DUF3418) B4599_08610 PF00270 DEAD/DEAH box helicase B4599_08610 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold B4599_08610 PF00271 Helicase conserved C-terminal domain B4599_08620 PF02685 Glucokinase B4599_08625 PF02685 Glucokinase B4599_08640 PF13340 Putative transposase of IS4/5 family (DUF4096) B4599_08655 PF13186 Iron-sulfur cluster-binding domain B4599_08655 PF04055 Radical SAM superfamily B4599_08660 PF05402 Coenzyme PQQ synthesis protein D (PqqD) B4599_08665 PF03070 TENA/THI-4/PQQC family B4599_08670 PF12706 Beta-lactamase superfamily domain B4599_08675 PF08042 PqqA family B4599_08680 PF02824 TGS domain B4599_08680 PF04607 Region found in RelA / SpoT proteins B4599_08680 PF13291 ACT domain B4599_08690 PF00535 Glycosyl transferase family 2 B4599_08695 PF00912 Transglycosylase B4599_08695 PF14814 Bifunctional transglycosylase second domain B4599_08695 PF00905 Penicillin binding protein transpeptidase domain B4599_08705 PF04851 Type III restriction enzyme, res subunit B4599_08705 PF13307 Helicase C-terminal domain B4599_08710 PF00814 Glycoprotease family B4599_08715 PF03747 ADP-ribosylglycohydrolase B4599_08725 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain B4599_08725 PF02951 Prokaryotic glutathione synthetase, N-terminal domain B4599_08730 PF00072 Response regulator receiver domain B4599_08735 PF00072 Response regulator receiver domain B4599_08740 PF01584 CheW-like domain B4599_08745 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term B4599_08745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain B4599_08750 PF00072 Response regulator receiver domain B4599_08750 PF01584 CheW-like domain B4599_08750 PF01627 Hpt domain B4599_08750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B4599_08765 PF13302 Acetyltransferase (GNAT) domain B4599_08795 PF01112 Asparaginase B4599_08800 PF03932 CutC family B4599_08850 PF01301 Glycosyl hydrolases family 35 B4599_08860 PF17678 Glycosyl hydrolase family 92 N-terminal domain B4599_08860 PF07971 Glycosyl hydrolase family 92 B4599_08925 PF00005 ABC transporter B4599_08925 PF00664 ABC transporter transmembrane region B4599_08925 PF03412 Peptidase C39 family B4599_08930 PF00933 Glycosyl hydrolase family 3 N terminal domain B4599_08930 PF01915 Glycosyl hydrolase family 3 C-terminal domain B4599_08930 PF07691 PA14 domain B4599_08930 PF14310 Fibronectin type III-like domain B4599_08940 PF07691 PA14 domain B4599_08940 PF00728 Glycosyl hydrolase family 20, catalytic domain B4599_08940 PF02838 Glycosyl hydrolase family 20, domain 2 B4599_08950 PF01476 LysM domain B4599_08950 PF00704 Glycosyl hydrolases family 18 B4599_08965 PF02685 Glucokinase B4599_08970 PF04452 RNA methyltransferase B4599_08975 PF00202 Aminotransferase class-III B4599_08980 PF00293 NUDIX domain B4599_08985 PF00459 Inositol monophosphatase family B4599_08990 PF03819 MazG nucleotide pyrophosphohydrolase domain B4599_09005 PF01145 SPFH domain / Band 7 family B4599_09005 PF16200 C-terminal region of band_7 B4599_09015 PF01571 Aminomethyltransferase folate-binding domain B4599_09015 PF08669 Glycine cleavage T-protein C-terminal barrel domain B4599_09020 PF01597 Glycine cleavage H-protein B4599_09055 PF09317 Domain of unknown function (DUF1974) B4599_09055 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B4599_09055 PF00441 Acyl-CoA dehydrogenase, C-terminal domain B4599_09065 PF00440 Bacterial regulatory proteins, tetR family B4599_09070 PF00593 TonB dependent receptor B4599_09070 PF07715 TonB-dependent Receptor Plug Domain B4599_09080 PF01430 Hsp33 protein B4599_09085 PF00912 Transglycosylase B4599_09090 PF00535 Glycosyl transferase family 2 B4599_09095 PF00571 CBS domain B4599_09095 PF00478 IMP dehydrogenase / GMP reductase domain B4599_09115 PF03006 Haemolysin-III related B4599_09120 PF00009 Elongation factor Tu GTP binding domain B4599_09120 PF16658 Class II release factor RF3, C-terminal domain B4599_09125 PF01476 LysM domain B4599_09125 PF08525 Opacity-associated protein A N-terminal motif B4599_09125 PF01551 Peptidase family M23 B4599_09130 PF00561 alpha/beta hydrolase fold B4599_09135 PF01053 Cys/Met metabolism PLP-dependent enzyme B4599_09145 PF03315 Serine dehydratase beta chain B4599_09145 PF03313 Serine dehydratase alpha chain B4599_09160 PF04264 YceI-like domain B4599_09170 PF04264 YceI-like domain B4599_09175 PF17149 Periplasmic sensor domain found in signal transduction proteins B4599_09175 PF00072 Response regulator receiver domain B4599_09175 PF00512 His Kinase A (phospho-acceptor) domain B4599_09175 PF01627 Hpt domain B4599_09175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B4599_09175 PF00672 HAMP domain B4599_09180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B4599_09180 PF00072 Response regulator receiver domain B4599_09180 PF01627 Hpt domain B4599_09180 PF00512 His Kinase A (phospho-acceptor) domain B4599_09180 PF00672 HAMP domain B4599_09180 PF17149 Periplasmic sensor domain found in signal transduction proteins B4599_09185 PF17149 Periplasmic sensor domain found in signal transduction proteins B4599_09185 PF00672 HAMP domain B4599_09185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B4599_09185 PF00512 His Kinase A (phospho-acceptor) domain B4599_09185 PF01627 Hpt domain B4599_09185 PF00072 Response regulator receiver domain B4599_09230 PF01381 Helix-turn-helix B4599_09230 PF06114 IrrE N-terminal-like domain B4599_09230 PF09856 Predicted transcriptional regulator (DUF2083) B4599_09235 PF00171 Aldehyde dehydrogenase family B4599_09240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B4599_09240 PF02770 Acyl-CoA dehydrogenase, middle domain B4599_09240 PF00441 Acyl-CoA dehydrogenase, C-terminal domain B4599_09245 PF00378 Enoyl-CoA hydratase/isomerase B4599_09250 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain B4599_09250 PF00378 Enoyl-CoA hydratase/isomerase B4599_09250 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain B4599_09255 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase B4599_09255 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase B4599_09260 PF01545 Cation efflux family B4599_09265 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain B4599_09265 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain B4599_09265 PF00378 Enoyl-CoA hydratase/isomerase B4599_09270 PF04542 Sigma-70 region 2 B4599_09270 PF08281 Sigma-70, region 4 B4599_09280 PF13180 PDZ domain B4599_09285 PF03144 Elongation factor Tu domain 2 B4599_09285 PF00679 Elongation factor G C-terminus B4599_09285 PF00009 Elongation factor Tu GTP binding domain B4599_09285 PF06421 GTP-binding protein LepA C-terminus B4599_09290 PF10502 Signal peptidase, peptidase S26 B4599_09300 PF14622 Ribonuclease-III-like B4599_09300 PF00035 Double-stranded RNA binding motif B4599_09305 PF01926 50S ribosome-binding GTPase B4599_09305 PF07650 KH domain B4599_09310 PF02565 Recombination protein O C terminal B4599_09310 PF11967 Recombination protein O N terminal B4599_09320 PF05958 tRNA (Uracil-5-)-methyltransferase B4599_09335 PF05598 Transposase domain (DUF772) B4599_09340 PF01323 DSBA-like thioredoxin domain B4599_09345 PF01593 Flavin containing amine oxidoreductase B4599_09350 PF04244 Deoxyribodipyrimidine photo-lyase-related protein B4599_09355 PF00933 Glycosyl hydrolase family 3 N terminal domain B4599_09365 PF01048 Phosphorylase superfamily B4599_09370 PF00313 'Cold-shock' DNA-binding domain B4599_09390 PF00271 Helicase conserved C-terminal domain B4599_09390 PF08494 DEAD/H associated B4599_09390 PF00270 DEAD/DEAH box helicase B4599_09395 PF04675 DNA ligase N terminus B4599_09395 PF04679 ATP dependent DNA ligase C terminal region B4599_09395 PF01068 ATP dependent DNA ligase domain B4599_09405 PF04679 ATP dependent DNA ligase C terminal region B4599_09405 PF01068 ATP dependent DNA ligase domain B4599_09405 PF04675 DNA ligase N terminus B4599_09420 PF00072 Response regulator receiver domain B4599_09420 PF00990 Diguanylate cyclase, GGDEF domain B4599_09435 PF02803 Thiolase, C-terminal domain B4599_09435 PF00108 Thiolase, N-terminal domain B4599_09440 PF03797 Autotransporter beta-domain B4599_09440 PF00082 Subtilase family B4599_09440 PF12951 Passenger-associated-transport-repeat B4599_09445 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain B4599_09445 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase B4599_09455 PF01863 Protein of unknown function DUF45 B4599_09460 PF07043 Protein of unknown function (DUF1328) B4599_09470 PF01258 Prokaryotic dksA/traR C4-type zinc finger B4599_09505 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase B4599_09520 PF03831 PhnA domain B4599_09520 PF08274 PhnA Zinc-Ribbon B4599_09535 PF00724 NADH:flavin oxidoreductase / NADH oxidase family B4599_09540 PF07690 Major Facilitator Superfamily B4599_09595 PF09924 Uncharacterised conserved protein (DUF2156) B4599_09595 PF03706 Lysylphosphatidylglycerol synthase TM region B4599_09605 PF01042 Endoribonuclease L-PSP B4599_09650 PF04542 Sigma-70 region 2 B4599_09650 PF04545 Sigma-70, region 4 B4599_09670 PF04060 Putative Fe-S cluster B4599_09680 PF01588 Putative tRNA binding domain B4599_09680 PF09334 tRNA synthetases class I (M) B4599_09700 PF00324 Amino acid permease B4599_09705 PF02574 Homocysteine S-methyltransferase B4599_09720 PF02592 Putative vitamin uptake transporter B4599_09735 PF05598 Transposase domain (DUF772) B4599_09750 PF00009 Elongation factor Tu GTP binding domain B4599_09815 PF00005 ABC transporter B4599_09815 PF13732 Domain of unknown function (DUF4162) B4599_09820 PF00593 TonB dependent receptor B4599_09820 PF07715 TonB-dependent Receptor Plug Domain B4599_09835 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit B4599_09840 PF14579 Helix-hairpin-helix motif B4599_09840 PF07733 Bacterial DNA polymerase III alpha NTPase domain B4599_09840 PF17657 Bacterial DNA polymerase III alpha subunit finger domain B4599_09840 PF01336 OB-fold nucleic acid binding domain B4599_09840 PF02811 PHP domain B4599_09845 PF01351 Ribonuclease HII B4599_09850 PF02684 Lipid-A-disaccharide synthetase B4599_09855 PF00132 Bacterial transferase hexapeptide (six repeats) B4599_09855 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 B4599_09860 PF07977 FabA-like domain B4599_09865 PF00132 Bacterial transferase hexapeptide (six repeats) B4599_09865 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD B4599_09875 PF01103 Surface antigen B4599_09875 PF07244 Surface antigen variable number repeat B4599_09880 PF02163 Peptidase family M50 B4599_09880 PF17820 PDZ domain B4599_09885 PF13288 DXP reductoisomerase C-terminal domain B4599_09885 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase B4599_09885 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain B4599_09895 PF01255 Putative undecaprenyl diphosphate synthase B4599_09900 PF01765 Ribosome recycling factor B4599_09905 PF00696 Amino acid kinase family B4599_09915 PF00889 Elongation factor TS B4599_09920 PF00318 Ribosomal protein S2 B4599_09955 PF00557 Metallopeptidase family M24 B4599_09960 PF01909 Nucleotidyltransferase domain B4599_09960 PF08335 GlnD PII-uridylyltransferase B4599_09960 PF01966 HD domain B4599_09965 PF14602 Hexapeptide repeat of succinyl-transferase B4599_09965 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal B4599_09965 PF00132 Bacterial transferase hexapeptide (six repeats) B4599_09975 PF03960 ArsC family B4599_09985 PF07687 Peptidase dimerisation domain B4599_09985 PF01546 Peptidase family M20/M25/M40 B4599_09990 PF00733 Asparagine synthase B4599_09990 PF13537 Glutamine amidotransferase domain B4599_10005 PF07715 TonB-dependent Receptor Plug Domain B4599_10005 PF00593 TonB dependent receptor B4599_10010 PF01804 Penicillin amidase B4599_10015 PF00210 Ferritin-like domain B4599_10020 PF03989 DNA gyrase C-terminal domain, beta-propeller B4599_10020 PF00521 DNA gyrase/topoisomerase IV, subunit A B4599_10035 PF02321 Outer membrane efflux protein B4599_10040 PF00529 HlyD membrane-fusion protein of T1SS B4599_10040 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion B4599_10045 PF07690 Major Facilitator Superfamily B4599_10095 PF13292 1-deoxy-D-xylulose-5-phosphate synthase B4599_10095 PF02780 Transketolase, C-terminal domain B4599_10095 PF02779 Transketolase, pyrimidine binding domain B4599_10105 PF00441 Acyl-CoA dehydrogenase, C-terminal domain B4599_10105 PF12806 Acetyl-CoA dehydrogenase C-terminal like B4599_10105 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B4599_10105 PF02770 Acyl-CoA dehydrogenase, middle domain B4599_10120 PF01668 SmpB protein B4599_10125 PF03364 Polyketide cyclase / dehydrase and lipid transport B4599_10130 PF03658 RnfH family Ubiquitin B4599_10140 PF04355 SmpA / OmlA family B4599_10145 PF01475 Ferric uptake regulator family B4599_10150 PF02463 RecF/RecN/SMC N terminal domain B4599_10155 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding B4599_10155 PF01628 HrcA protein C terminal domain B4599_10160 PF01025 GrpE B4599_10165 PF00012 Hsp70 protein B4599_10170 PF00226 DnaJ domain B4599_10170 PF00684 DnaJ central domain B4599_10170 PF01556 DnaJ C terminal domain B4599_10180 PF08543 Phosphomethylpyrimidine kinase B4599_10185 PF01817 Chorismate mutase type II B4599_10185 PF02153 Prephenate dehydrogenase B4599_10200 PF03466 LysR substrate binding domain B4599_10200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B4599_10210 PF00005 ABC transporter B4599_10210 PF00664 ABC transporter transmembrane region B4599_10215 PF01205 Uncharacterized protein family UPF0029 B4599_10220 PF03641 Possible lysine decarboxylase B4599_10225 PF07992 Pyridine nucleotide-disulphide oxidoreductase B4599_10225 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain B4599_10230 PF02817 e3 binding domain B4599_10230 PF00364 Biotin-requiring enzyme B4599_10230 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) B4599_10235 PF16078 2-oxoglutarate dehydrogenase N-terminus B4599_10235 PF16870 2-oxoglutarate dehydrogenase C-terminal B4599_10235 PF00676 Dehydrogenase E1 component B4599_10235 PF02779 Transketolase, pyrimidine binding domain B4599_10245 PF08007 Cupin superfamily protein B4599_10265 PF00206 Lyase B4599_10265 PF08328 Adenylosuccinate lyase C-terminal B4599_10275 PF00571 CBS domain B4599_10275 PF03471 Transporter associated domain B4599_10275 PF01595 Cyclin M transmembrane N-terminal domain B4599_10285 PF13340 Putative transposase of IS4/5 family (DUF4096) B4599_10305 PF00206 Lyase B4599_10305 PF10415 Fumarase C C-terminus B4599_10335 PF00005 ABC transporter B4599_10340 PF00392 Bacterial regulatory proteins, gntR family B4599_10350 PF00255 Glutathione peroxidase B4599_10355 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase B4599_10355 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase B4599_10360 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain B4599_10360 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain B4599_10360 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain B4599_10365 PF04102 SlyX B4599_10385 PF07690 Major Facilitator Superfamily B4599_10390 PF00294 pfkB family carbohydrate kinase B4599_10400 PF00809 Pterin binding enzyme B4599_10400 PF02607 B12 binding domain B4599_10400 PF02965 Vitamin B12 dependent methionine synthase, activation domain B4599_10400 PF02574 Homocysteine S-methyltransferase B4599_10400 PF02310 B12 binding domain B4599_10405 PF00809 Pterin binding enzyme B4599_10405 PF02574 Homocysteine S-methyltransferase B4599_10410 PF01209 ubiE/COQ5 methyltransferase family B4599_10415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B4599_10415 PF02770 Acyl-CoA dehydrogenase, middle domain B4599_10415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain B4599_10445 PF00575 S1 RNA binding domain B4599_10445 PF08461 Ribonuclease R winged-helix domain B4599_10445 PF17876 Cold shock domain B4599_10445 PF00773 RNB domain B4599_10445 PF08206 Ribonuclease B OB domain B4599_10465 PF00588 SpoU rRNA Methylase family B4599_10465 PF08032 RNA 2'-O ribose methyltransferase substrate binding B4599_10475 PF01609 Transposase DDE domain B4599_10475 PF05598 Transposase domain (DUF772) B4599_10495 PF00872 Transposase, Mutator family B4599_10505 PF00313 'Cold-shock' DNA-binding domain B4599_10510 PF00561 alpha/beta hydrolase fold B4599_10520 PF01609 Transposase DDE domain B4599_10520 PF05598 Transposase domain (DUF772) B4599_10570 PF01609 Transposase DDE domain B4599_10570 PF05598 Transposase domain (DUF772) B4599_10580 PF05598 Transposase domain (DUF772) B4599_10595 PF03544 Gram-negative bacterial TonB protein C-terminal B4599_10600 PF02403 Seryl-tRNA synthetase N-terminal domain B4599_10600 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) B4599_10620 PF01609 Transposase DDE domain B4599_10620 PF05598 Transposase domain (DUF772) B4599_10625 PF02525 Flavodoxin-like fold B4599_10630 PF03466 LysR substrate binding domain B4599_10630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B4599_10645 PF03377 TAL effector repeat B4599_10665 PF03377 TAL effector repeat B4599_10685 PF03377 TAL effector repeat B4599_10715 PF03079 ARD/ARD' family B4599_10720 PF00596 Class II Aldolase and Adducin N-terminal domain B4599_10725 PF13520 Amino acid permease B4599_10730 PF13520 Amino acid permease B4599_10740 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain B4599_10740 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain B4599_10745 PF02913 FAD linked oxidases, C-terminal domain B4599_10745 PF01565 FAD binding domain B4599_10760 PF13276 HTH-like domain B4599_10760 PF13683 Integrase core domain B4599_10770 PF03918 Cytochrome C biogenesis protein B4599_10775 PF08534 Redoxin B4599_10780 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal B4599_10780 PF01578 Cytochrome C assembly protein B4599_10785 PF03100 CcmE B4599_10795 PF01578 Cytochrome C assembly protein B4599_10800 PF03379 CcmB protein B4599_10805 PF00005 ABC transporter B4599_10810 PF00155 Aminotransferase class I and II B4599_10815 PF00795 Carbon-nitrogen hydrolase B4599_10835 PF01479 S4 domain B4599_10835 PF00849 RNA pseudouridylate synthase B4599_10840 PF04079 Segregation and condensation complex subunit ScpB B4599_10845 PF02616 Segregation and condensation protein ScpA B4599_10850 PF03795 YCII-related domain B4599_10860 PF00356 Bacterial regulatory proteins, lacI family B4599_10880 PF00528 Binding-protein-dependent transport system inner membrane component B4599_10885 PF00528 Binding-protein-dependent transport system inner membrane component B4599_10910 PF00795 Carbon-nitrogen hydrolase B4599_10915 PF01609 Transposase DDE domain B4599_10915 PF05598 Transposase domain (DUF772) B4599_10925 PF04371 Porphyromonas-type peptidyl-arginine deiminase B4599_10935 PF00444 Ribosomal protein L36 B4599_10940 PF02224 Cytidylate kinase B4599_10945 PF00575 S1 RNA binding domain B4599_10950 PF00216 Bacterial DNA-binding protein B4599_10960 PF18073 Rubredoxin metal binding domain B4599_10965 PF00953 Glycosyl transferase family 4 B4599_10970 PF02719 Polysaccharide biosynthesis protein B4599_10975 PF00483 Nucleotidyl transferase B4599_10995 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain B4599_10995 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain B4599_11000 PF00571 CBS domain B4599_11000 PF00478 IMP dehydrogenase / GMP reductase domain B4599_11005 PF00117 Glutamine amidotransferase class-I B4599_11005 PF00958 GMP synthase C terminal domain B4599_11005 PF02540 NAD synthase B4599_11010 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) B4599_11015 PF00361 Proton-conducting membrane transporter B4599_11015 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus B4599_11015 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus B4599_11020 PF03466 LysR substrate binding domain B4599_11020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B4599_11045 PF03601 Conserved hypothetical protein 698 B4599_11050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B4599_11050 PF03466 LysR substrate binding domain B4599_11065 PF00072 Response regulator receiver domain B4599_11075 PF01566 Natural resistance-associated macrophage protein B4599_11080 PF01325 Iron dependent repressor, N-terminal DNA binding domain B4599_11080 PF02742 Iron dependent repressor, metal binding and dimerisation domain B4599_11085 PF14437 MafB19-like deaminase B4599_11090 PF00929 Exonuclease B4599_11095 PF05552 Conserved TM helix B4599_11095 PF00924 Mechanosensitive ion channel B4599_11100 PF02896 PEP-utilising enzyme, TIM barrel domain B4599_11100 PF00391 PEP-utilising enzyme, mobile domain B4599_11100 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain B4599_11105 PF03618 Kinase/pyrophosphorylase B4599_11140 PF01066 CDP-alcohol phosphatidyltransferase B4599_11150 PF00561 alpha/beta hydrolase fold B4599_11165 PF01266 FAD dependent oxidoreductase B4599_11165 PF00355 Rieske [2Fe-2S] domain B4599_11175 PF09371 Tex-like protein N-terminal domain B4599_11175 PF16921 Tex protein YqgF-like domain B4599_11175 PF00575 S1 RNA binding domain B4599_11175 PF17674 HHH domain B4599_11190 PF00072 Response regulator receiver domain B4599_11200 PF04551 GcpE protein B4599_11205 PF01569 PAP2 superfamily B4599_11215 PF07690 Major Facilitator Superfamily B4599_11230 PF01177 Asp/Glu/Hydantoin racemase B4599_11240 PF00892 EamA-like transporter family B4599_11245 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain B4599_11245 PF01565 FAD binding domain B4599_11250 PF01180 Dihydroorotate dehydrogenase B4599_11265 PF00171 Aldehyde dehydrogenase family B4599_11275 PF03073 TspO/MBR family B4599_11280 PF00696 Amino acid kinase family B4599_11280 PF01842 ACT domain B4599_11280 PF03447 Homoserine dehydrogenase, NAD binding domain B4599_11280 PF13840 ACT domain B4599_11280 PF00742 Homoserine dehydrogenase B4599_11285 PF00288 GHMP kinases N terminal domain B4599_11285 PF08544 GHMP kinases C terminal B4599_11290 PF07519 Tannase and feruloyl esterase B4599_11295 PF07519 Tannase and feruloyl esterase B4599_11300 PF07519 Tannase and feruloyl esterase B4599_11310 PF14821 Threonine synthase N terminus B4599_11310 PF00291 Pyridoxal-phosphate dependent enzyme B4599_11325 PF03129 Anticodon binding domain B4599_11325 PF13393 Histidyl-tRNA synthetase B4599_11345 PF01634 ATP phosphoribosyltransferase B4599_11345 PF08029 HisG, C-terminal domain B4599_11350 PF00815 Histidinol dehydrogenase B4599_11355 PF00155 Aminotransferase class I and II B4599_11360 PF00475 Imidazoleglycerol-phosphate dehydratase B4599_11365 PF00117 Glutamine amidotransferase class-I B4599_11370 PF00977 Histidine biosynthesis protein B4599_11375 PF00977 Histidine biosynthesis protein B4599_11380 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase B4599_11380 PF01502 Phosphoribosyl-AMP cyclohydrolase B4599_11390 PF03377 TAL effector repeat B4599_11405 PF03377 TAL effector repeat B4599_11420 PF02810 SEC-C motif B4599_11420 PF07517 SecA DEAD-like domain B4599_11420 PF01043 SecA preprotein cross-linking domain B4599_11420 PF07516 SecA Wing and Scaffold domain B4599_11435 PF13340 Putative transposase of IS4/5 family (DUF4096) B4599_11460 PF13340 Putative transposase of IS4/5 family (DUF4096) B4599_11480 PF03377 TAL effector repeat B4599_11495 PF03377 TAL effector repeat B4599_11500 PF13340 Putative transposase of IS4/5 family (DUF4096) B4599_11520 PF03377 TAL effector repeat B4599_11530 PF13333 Integrase core domain B4599_11530 PF00665 Integrase core domain B4599_11530 PF13276 HTH-like domain B4599_11545 PF01609 Transposase DDE domain B4599_11545 PF05598 Transposase domain (DUF772) B4599_11560 PF00872 Transposase, Mutator family B4599_11570 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily B4599_11590 PF01066 CDP-alcohol phosphatidyltransferase B4599_11595 PF01541 GIY-YIG catalytic domain B4599_11595 PF02151 UvrB/uvrC motif B4599_11595 PF08459 UvrC Helix-hairpin-helix N-terminal B4599_11605 PF01451 Low molecular weight phosphotyrosine protein phosphatase B4599_11610 PF02348 Cytidylyltransferase B4599_11615 PF02606 Tetraacyldisaccharide-1-P 4'-kinase B4599_11620 PF00664 ABC transporter transmembrane region B4599_11620 PF00005 ABC transporter B4599_11630 PF01618 MotA/TolQ/ExbB proton channel family B4599_11635 PF00753 Metallo-beta-lactamase superfamily B4599_11635 PF03772 Competence protein B4599_11655 PF00005 ABC transporter B4599_11660 PF02687 FtsX-like permease family B4599_11660 PF12704 MacB-like periplasmic core domain B4599_11670 PF03937 Flavinator of succinate dehydrogenase B4599_11675 PF13085 2Fe-2S iron-sulfur cluster binding domain B4599_11685 PF00890 FAD binding domain B4599_11685 PF02910 Fumarate reductase flavoprotein C-term B4599_11690 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit B4599_11695 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit B4599_11705 PF01571 Aminomethyltransferase folate-binding domain B4599_11715 PF00005 ABC transporter B4599_11715 PF17912 MalK OB fold domain B4599_11720 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain B4599_11720 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain B4599_11725 PF02685 Glucokinase B4599_11730 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase B4599_11735 PF00920 Dehydratase family B4599_11740 PF01081 KDPG and KHG aldolase B4599_11770 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) B4599_11770 PF01627 Hpt domain B4599_11770 PF00072 Response regulator receiver domain B4599_11770 PF00512 His Kinase A (phospho-acceptor) domain B4599_11770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B4599_11770 PF00672 HAMP domain B4599_11785 PF13340 Putative transposase of IS4/5 family (DUF4096) B4599_11805 PF00990 Diguanylate cyclase, GGDEF domain B4599_11805 PF08448 PAS fold B4599_11825 PF02253 Phospholipase A1 B4599_11845 PF05681 Fumarate hydratase (Fumerase) B4599_11845 PF05683 Fumarase C-terminus B4599_11850 PF00005 ABC transporter B4599_11855 PF00970 Oxidoreductase FAD-binding domain B4599_11855 PF00175 Oxidoreductase NAD-binding domain B4599_11860 PF00255 Glutathione peroxidase B4599_11895 PF12802 MarR family B4599_11930 PF00933 Glycosyl hydrolase family 3 N terminal domain B4599_11930 PF01915 Glycosyl hydrolase family 3 C-terminal domain B4599_11930 PF14310 Fibronectin type III-like domain B4599_11945 PF00563 EAL domain B4599_11945 PF01590 GAF domain B4599_11945 PF00990 Diguanylate cyclase, GGDEF domain B4599_11945 PF00360 Phytochrome region B4599_11955 PF00474 Sodium:solute symporter family B4599_11965 PF01915 Glycosyl hydrolase family 3 C-terminal domain B4599_11965 PF14310 Fibronectin type III-like domain B4599_11965 PF00933 Glycosyl hydrolase family 3 N terminal domain B4599_11985 PF00342 Phosphoglucose isomerase B4599_11990 PF02261 Aspartate decarboxylase B4599_11995 PF02569 Pantoate-beta-alanine ligase B4599_12000 PF02548 Ketopantoate hydroxymethyltransferase B4599_12005 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) B4599_12010 PF12627 Probable RNA and SrmB- binding site of polymerase A B4599_12010 PF12626 Polymerase A arginine-rich C-terminus B4599_12010 PF01743 Poly A polymerase head domain B4599_12020 PF02649 Type I GTP cyclohydrolase folE2 B4599_12025 PF01520 N-acetylmuramoyl-L-alanine amidase B4599_12040 PF05598 Transposase domain (DUF772) B4599_12045 PF03797 Autotransporter beta-domain B4599_12045 PF00082 Subtilase family B4599_12055 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion B4599_12060 PF00873 AcrB/AcrD/AcrF family B4599_12065 PF02321 Outer membrane efflux protein B4599_12070 PF00512 His Kinase A (phospho-acceptor) domain B4599_12070 PF08448 PAS fold B4599_12070 PF13426 PAS domain B4599_12070 PF00072 Response regulator receiver domain B4599_12070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B4599_12075 PF00196 Bacterial regulatory proteins, luxR family B4599_12075 PF00072 Response regulator receiver domain B4599_12080 PF12951 Passenger-associated-transport-repeat B4599_12095 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) B4599_12100 PF01842 ACT domain B4599_12100 PF01817 Chorismate mutase type II B4599_12100 PF00800 Prephenate dehydratase B4599_12105 PF00266 Aminotransferase class-V B4599_12110 PF00174 Oxidoreductase molybdopterin binding domain B4599_12120 PF01794 Ferric reductase like transmembrane component B4599_12145 PF00392 Bacterial regulatory proteins, gntR family B4599_12145 PF07702 UTRA domain B4599_12155 PF07969 Amidohydrolase family B4599_12160 PF00221 Aromatic amino acid lyase B4599_12170 PF17391 Urocanase N-terminal domain B4599_12170 PF01175 Urocanase Rossmann-like domain B4599_12170 PF17392 Urocanase C-terminal domain B4599_12185 PF13276 HTH-like domain B4599_12190 PF01527 Transposase B4599_12195 PF03989 DNA gyrase C-terminal domain, beta-propeller B4599_12195 PF00521 DNA gyrase/topoisomerase IV, subunit A B4599_12200 PF01008 Initiation factor 2 subunit family B4599_12215 PF00152 tRNA synthetases class II (D, K and N) B4599_12220 PF12826 Helix-hairpin-helix motif B4599_12220 PF01653 NAD-dependent DNA ligase adenylation domain B4599_12220 PF03119 NAD-dependent DNA ligase C4 zinc finger domain B4599_12220 PF00533 BRCA1 C Terminus (BRCT) domain B4599_12220 PF03120 NAD-dependent DNA ligase OB-fold domain B4599_12230 PF04354 ZipA, C-terminal FtsZ-binding domain B4599_12235 PF02463 RecF/RecN/SMC N terminal domain B4599_12240 PF03948 Ribosomal protein L9, C-terminal domain B4599_12240 PF01281 Ribosomal protein L9, N-terminal domain B4599_12245 PF01084 Ribosomal protein S18 B4599_12250 PF01250 Ribosomal protein S6 B4599_12255 PF01521 Iron-sulphur cluster biosynthesis B4599_12260 PF01336 OB-fold nucleic acid binding domain B4599_12260 PF00152 tRNA synthetases class II (D, K and N) B4599_12285 PF00484 Carbonic anhydrase B4599_12290 PF06052 3-hydroxyanthranilic acid dioxygenase B4599_12300 PF00266 Aminotransferase class-V B4599_12305 PF01494 FAD binding domain B4599_12310 PF00929 Exonuclease B4599_12310 PF08411 Exonuclease C-terminal B4599_12320 PF00248 Aldo/keto reductase family B4599_12335 PF01513 ATP-NAD kinase B4599_12345 PF01170 Putative RNA methylase family UPF0020 B4599_12345 PF10672 S-adenosylmethionine-dependent methyltransferase B4599_12345 PF02926 THUMP domain B4599_12385 PF00581 Rhodanese-like domain B4599_12390 PF00293 NUDIX domain B4599_12395 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase B4599_12395 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase B4599_12400 PF00378 Enoyl-CoA hydratase/isomerase B4599_12410 PF10576 Iron-sulfur binding domain of endonuclease III B4599_12410 PF00633 Helix-hairpin-helix motif B4599_12410 PF00730 HhH-GPD superfamily base excision DNA repair protein B4599_12420 PF00484 Carbonic anhydrase B4599_12425 PF05598 Transposase domain (DUF772) B4599_12425 PF01609 Transposase DDE domain B4599_12440 PF13340 Putative transposase of IS4/5 family (DUF4096) B4599_12455 PF12849 PBP superfamily domain B4599_12460 PF12849 PBP superfamily domain B4599_12465 PF00528 Binding-protein-dependent transport system inner membrane component B4599_12470 PF00528 Binding-protein-dependent transport system inner membrane component B4599_12475 PF00005 ABC transporter B4599_12480 PF01895 PhoU domain B4599_12490 PF00929 Exonuclease B4599_12505 PF00872 Transposase, Mutator family B4599_12525 PF13495 Phage integrase, N-terminal SAM-like domain B4599_12525 PF00589 Phage integrase family B4599_12530 PF02355 Protein export membrane protein B4599_12530 PF07549 SecD/SecF GG Motif B4599_12535 PF02355 Protein export membrane protein B4599_12535 PF07549 SecD/SecF GG Motif B4599_12535 PF13721 SecD export protein N-terminal TM region B4599_12540 PF02699 Preprotein translocase subunit B4599_12545 PF01702 Queuine tRNA-ribosyltransferase B4599_12550 PF02547 Queuosine biosynthesis protein B4599_12620 PF13340 Putative transposase of IS4/5 family (DUF4096) B4599_12640 PF00037 4Fe-4S binding domain B4599_12655 PF01467 Cytidylyltransferase-like B4599_12665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B4599_12665 PF00183 Hsp90 protein B4599_12680 PF00899 ThiF family B4599_12720 PF05598 Transposase domain (DUF772) B4599_12720 PF01609 Transposase DDE domain B4599_12750 PF03454 MoeA C-terminal region (domain IV) B4599_12750 PF00994 Probable molybdopterin binding domain B4599_12750 PF03453 MoeA N-terminal region (domain I and II) B4599_12755 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal B4599_12755 PF01926 50S ribosome-binding GTPase B4599_12760 PF01011 PQQ enzyme repeat B4599_12760 PF13360 PQQ-like domain B4599_12770 PF13464 Domain of unknown function (DUF4115) B4599_12780 PF04055 Radical SAM superfamily B4599_12785 PF00334 Nucleoside diphosphate kinase B4599_12795 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain B4599_12795 PF00378 Enoyl-CoA hydratase/isomerase B4599_12795 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain B4599_12800 PF02803 Thiolase, C-terminal domain B4599_12800 PF00108 Thiolase, N-terminal domain B4599_12805 PF00654 Voltage gated chloride channel B4599_12815 PF02537 CrcB-like protein, Camphor Resistance (CrcB) B4599_12825 PF00004 ATPase family associated with various cellular activities (AAA) B4599_12825 PF16193 AAA C-terminal domain B4599_12825 PF12002 MgsA AAA+ ATPase C terminal B4599_12840 PF03548 Outer membrane lipoprotein carrier protein LolA B4599_12850 PF01580 FtsK/SpoIIIE family B4599_12850 PF09397 Ftsk gamma domain B4599_12850 PF17854 FtsK alpha domain B4599_12850 PF13491 4TM region of DNA translocase FtsK/SpoIIIE B4599_12855 PF07992 Pyridine nucleotide-disulphide oxidoreductase B4599_12875 PF03588 Leucyl/phenylalanyl-tRNA protein transferase B4599_12880 PF01176 Translation initiation factor 1A / IF-1 B4599_12885 PF02861 Clp amino terminal domain, pathogenicity island component B4599_12885 PF07724 AAA domain (Cdc48 subfamily) B4599_12885 PF10431 C-terminal, D2-small domain, of ClpB protein B4599_12885 PF17871 AAA lid domain B4599_12885 PF00004 ATPase family associated with various cellular activities (AAA) B4599_12890 PF02617 ATP-dependent Clp protease adaptor protein ClpS B4599_12895 PF00293 NUDIX domain B4599_12905 PF04356 Protein of unknown function (DUF489) B4599_12910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain B4599_12910 PF00672 HAMP domain B4599_12910 PF12729 Four helix bundle sensory module for signal transduction B4599_12925 PF00563 EAL domain B4599_12925 PF08448 PAS fold B4599_12925 PF00990 Diguanylate cyclase, GGDEF domain B4599_12925 PF08447 PAS fold B4599_12930 PF07730 Histidine kinase B4599_12930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B4599_12935 PF00563 EAL domain B4599_12935 PF00990 Diguanylate cyclase, GGDEF domain B4599_12935 PF03707 Bacterial signalling protein N terminal repeat B4599_12940 PF13426 PAS domain B4599_12940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B4599_12940 PF00989 PAS fold B4599_12940 PF00512 His Kinase A (phospho-acceptor) domain B4599_12940 PF13188 PAS domain B4599_12960 PF00072 Response regulator receiver domain B4599_12960 PF01584 CheW-like domain B4599_12970 PF06429 Flagellar basal body rod FlgEFG protein C-terminal B4599_12970 PF00460 Flagella basal body rod protein B4599_12975 PF03963 Flagellar hook capping protein - N-terminal region B4599_12980 PF07559 Flagellar basal body protein FlaE B4599_12980 PF06429 Flagellar basal body rod FlgEFG protein C-terminal B4599_12980 PF00460 Flagella basal body rod protein B4599_12985 PF00460 Flagella basal body rod protein B4599_12985 PF06429 Flagellar basal body rod FlgEFG protein C-terminal B4599_12995 PF00460 Flagella basal body rod protein B4599_12995 PF06429 Flagellar basal body rod FlgEFG protein C-terminal B4599_13000 PF02107 Flagellar L-ring protein B4599_13005 PF02119 Flagellar P-ring protein B4599_13010 PF10135 Rod binding protein B4599_13010 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase B4599_13015 PF06429 Flagellar basal body rod FlgEFG protein C-terminal B4599_13015 PF07196 Flagellin hook IN motif B4599_13025 PF00700 Bacterial flagellin C-terminal helical region B4599_13025 PF00669 Bacterial flagellin N-terminal helical region B4599_13030 PF02465 Flagellar hook-associated protein 2 N-terminus B4599_13030 PF07195 Flagellar hook-associated protein 2 C-terminus B4599_13030 PF07196 Flagellin hook IN motif B4599_13035 PF02561 Flagellar protein FliS B4599_13050 PF00072 Response regulator receiver domain B4599_13050 PF00196 Bacterial regulatory proteins, luxR family B4599_13055 PF04552 Sigma-54, DNA binding domain B4599_13055 PF04963 Sigma-54 factor, core binding domain B4599_13055 PF00309 Sigma-54 factor, Activator interacting domain (AID) B4599_13060 PF00072 Response regulator receiver domain B4599_13060 PF01339 CheB methylesterase B4599_13065 PF00072 Response regulator receiver domain B4599_13065 PF02954 Bacterial regulatory protein, Fis family B4599_13065 PF00158 Sigma-54 interaction domain B4599_13070 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family B4599_13080 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III B4599_13080 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal B4599_13115 PF00534 Glycosyl transferases group 1 B4599_13115 PF00535 Glycosyl transferase family 2 B4599_13130 PF02049 Flagellar hook-basal body complex protein FliE B4599_13135 PF08345 Flagellar M-ring protein C-terminal B4599_13135 PF01514 Secretory protein of YscJ/FliF family B4599_13140 PF14842 FliG N-terminal domain B4599_13140 PF14841 FliG middle domain B4599_13140 PF01706 FliG C-terminal domain B4599_13150 PF18269 T3SS EscN ATPase C-terminal domain B4599_13150 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain B4599_13170 PF02154 Flagellar motor switch protein FliM B4599_13170 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term B4599_13175 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term B4599_13180 PF04347 Flagellar biosynthesis protein, FliO B4599_13185 PF00813 FliP family B4599_13195 PF01313 Bacterial export proteins, family 3 B4599_13200 PF01311 Bacterial export proteins, family 1 B4599_13205 PF13188 PAS domain B4599_13205 PF03707 Bacterial signalling protein N terminal repeat B4599_13205 PF00990 Diguanylate cyclase, GGDEF domain B4599_13205 PF00563 EAL domain B4599_13210 PF13188 PAS domain B4599_13210 PF03707 Bacterial signalling protein N terminal repeat B4599_13210 PF00990 Diguanylate cyclase, GGDEF domain B4599_13210 PF00563 EAL domain B4599_13215 PF00563 EAL domain B4599_13215 PF00990 Diguanylate cyclase, GGDEF domain B4599_13215 PF03707 Bacterial signalling protein N terminal repeat B4599_13220 PF01312 FlhB HrpN YscU SpaS Family B4599_13225 PF00771 FHIPEP family B4599_13235 PF00448 SRP54-type protein, GTPase domain B4599_13240 PF10609 NUBPL iron-transfer P-loop NTPase B4599_13245 PF04545 Sigma-70, region 4 B4599_13245 PF04539 Sigma-70 region 3 B4599_13245 PF04542 Sigma-70 region 2 B4599_13250 PF00072 Response regulator receiver domain B4599_13255 PF04344 Chemotaxis phosphatase, CheZ B4599_13260 PF01584 CheW-like domain B4599_13260 PF02895 Signal transducing histidine kinase, homodimeric domain B4599_13260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B4599_13260 PF01627 Hpt domain B4599_13260 PF07194 P2 response regulator binding domain B4599_13295 PF01609 Transposase DDE domain B4599_13295 PF05598 Transposase domain (DUF772) B4599_13305 PF03527 RHS protein B4599_13305 PF05593 RHS Repeat B4599_13315 PF01609 Transposase DDE domain B4599_13315 PF05598 Transposase domain (DUF772) B4599_13325 PF01609 Transposase DDE domain B4599_13325 PF05598 Transposase domain (DUF772) B4599_13360 PF00034 Cytochrome c B4599_13420 PF05598 Transposase domain (DUF772) B4599_13420 PF01609 Transposase DDE domain B4599_13425 PF00005 ABC transporter B4599_13425 PF00664 ABC transporter transmembrane region B4599_13430 PF00664 ABC transporter transmembrane region B4599_13430 PF00005 ABC transporter B4599_13445 PF01609 Transposase DDE domain B4599_13445 PF05598 Transposase domain (DUF772) B4599_13475 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain B4599_13475 PF02129 X-Pro dipeptidyl-peptidase (S15 family) B4599_13480 PF00171 Aldehyde dehydrogenase family B4599_13485 PF01472 PUA domain B4599_13485 PF00696 Amino acid kinase family B4599_13500 PF00206 Lyase B4599_13505 PF01118 Semialdehyde dehydrogenase, NAD binding domain B4599_13515 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase B4599_13515 PF00696 Amino acid kinase family B4599_13520 PF07687 Peptidase dimerisation domain B4599_13520 PF01546 Peptidase family M20/M25/M40 B4599_13530 PF00764 Arginosuccinate synthase B4599_13535 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain B4599_13535 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain B4599_13545 PF01406 tRNA synthetases class I (C) catalytic domain B4599_13545 PF09190 DALR domain B4599_13550 PF02657 Fe-S metabolism associated domain B4599_13565 PF01258 Prokaryotic dksA/traR C4-type zinc finger B4599_13570 PF01809 Putative membrane protein insertion efficiency factor B4599_13575 PF01979 Amidohydrolase family B4599_13580 PF08460 Bacterial SH3 domain B4599_13580 PF01551 Peptidase family M23 B4599_13590 PF13340 Putative transposase of IS4/5 family (DUF4096) B4599_13615 PF05598 Transposase domain (DUF772) B4599_13615 PF01609 Transposase DDE domain B4599_13625 PF01095 Pectinesterase B4599_13640 PF00295 Glycosyl hydrolases family 28 B4599_13650 PF13419 Haloacid dehalogenase-like hydrolase B4599_13660 PF01979 Amidohydrolase family B4599_13670 PF08207 Elongation factor P (EF-P) KOW-like domain B4599_13670 PF09285 Elongation factor P, C-terminal B4599_13670 PF01132 Elongation factor P (EF-P) OB domain B4599_13675 PF04055 Radical SAM superfamily B4599_13680 PF03707 Bacterial signalling protein N terminal repeat B4599_13680 PF00990 Diguanylate cyclase, GGDEF domain B4599_13680 PF00563 EAL domain B4599_13680 PF13188 PAS domain B4599_13690 PF00588 SpoU rRNA Methylase family B4599_13695 PF00459 Inositol monophosphatase family B4599_13700 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain B4599_13700 PF02777 Iron/manganese superoxide dismutases, C-terminal domain B4599_13705 PF00545 ribonuclease B4599_13730 PF03880 DbpA RNA binding domain B4599_13730 PF00271 Helicase conserved C-terminal domain B4599_13730 PF00270 DEAD/DEAH box helicase B4599_13735 PF00156 Phosphoribosyl transferase domain B4599_13740 PF02696 Uncharacterized ACR, YdiU/UPF0061 family B4599_13750 PF14497 Glutathione S-transferase, C-terminal domain B4599_13750 PF02798 Glutathione S-transferase, N-terminal domain B4599_13755 PF00313 'Cold-shock' DNA-binding domain B4599_13760 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 B4599_13765 PF07152 YaeQ protein B4599_13775 PF00563 EAL domain B4599_13775 PF00990 Diguanylate cyclase, GGDEF domain B4599_13775 PF00072 Response regulator receiver domain B4599_13780 PF01435 Peptidase family M48 B4599_13785 PF00749 tRNA synthetases class I (E and Q), catalytic domain B4599_13790 PF00106 short chain dehydrogenase B4599_13795 PF05233 PHB accumulation regulatory domain B4599_13795 PF07879 PHB/PHA accumulation regulator DNA-binding domain B4599_13815 PF08676 MutL C terminal dimerisation domain B4599_13815 PF01119 DNA mismatch repair protein, C-terminal domain B4599_13820 PF11741 AMIN domain B4599_13820 PF01520 N-acetylmuramoyl-L-alanine amidase B4599_13825 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE B4599_13830 PF03853 YjeF-related protein N-terminus B4599_13830 PF01256 Carbohydrate kinase B4599_13835 PF08331 Domain of unknown function (DUF1730) B4599_13845 PF13340 Putative transposase of IS4/5 family (DUF4096) B4599_13850 PF02601 Exonuclease VII, large subunit B4599_13850 PF13742 OB-fold nucleic acid binding domain B4599_13865 PF03781 Sulfatase-modifying factor enzyme 1 B4599_13880 PF01612 3'-5' exonuclease B4599_13880 PF00570 HRDC domain B4599_13885 PF13298 DNA polymerase Ligase (LigD) B4599_13885 PF01068 ATP dependent DNA ligase domain B4599_13885 PF04679 ATP dependent DNA ligase C terminal region B4599_13935 PF01619 Proline dehydrogenase B4599_13935 PF14850 DNA-binding domain of Proline dehydrogenase B4599_13935 PF18327 Proline utilization A proline dehydrogenase N-terminal domain B4599_13935 PF00171 Aldehyde dehydrogenase family B4599_13950 PF00872 Transposase, Mutator family B4599_13990 PF04386 Stringent starvation protein B B4599_13995 PF00043 Glutathione S-transferase, C-terminal domain B4599_13995 PF02798 Glutathione S-transferase, N-terminal domain B4599_14000 PF02167 Cytochrome C1 family B4599_14005 PF00032 Cytochrome b(C-terminal)/b6/petD B4599_14005 PF00033 Cytochrome b/b6/petB B4599_14010 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal B4599_14010 PF00355 Rieske [2Fe-2S] domain B4599_14015 PF01464 Transglycosylase SLT domain B4599_14035 PF01938 TRAM domain B4599_14035 PF04055 Radical SAM superfamily B4599_14035 PF00919 Uncharacterized protein family UPF0004 B4599_14040 PF02562 PhoH-like protein B4599_14050 PF02130 Uncharacterized protein family UPF0054 B4599_14060 PF03471 Transporter associated domain B4599_14060 PF00571 CBS domain B4599_14075 PF00171 Aldehyde dehydrogenase family B4599_14085 PF00528 Binding-protein-dependent transport system inner membrane component B4599_14090 PF00528 Binding-protein-dependent transport system inner membrane component B4599_14095 PF00005 ABC transporter B4599_14095 PF08402 TOBE domain B4599_14100 PF02321 Outer membrane efflux protein B4599_14105 PF07690 Major Facilitator Superfamily B4599_14110 PF13533 Biotin-lipoyl like B4599_14120 PF00120 Glutamine synthetase, catalytic domain B4599_14130 PF00120 Glutamine synthetase, catalytic domain B4599_14135 PF01266 FAD dependent oxidoreductase B4599_14140 PF00072 Response regulator receiver domain B4599_14140 PF00990 Diguanylate cyclase, GGDEF domain B4599_14145 PF00083 Sugar (and other) transporter B4599_14145 PF07690 Major Facilitator Superfamily B4599_14155 PF00384 Molybdopterin oxidoreductase B4599_14160 PF02634 FdhD/NarQ family B4599_14165 PF07690 Major Facilitator Superfamily B4599_14175 PF00202 Aminotransferase class-III B4599_14180 PF00005 ABC transporter B4599_14190 PF04286 Protein of unknown function (DUF445) B4599_14195 PF00072 Response regulator receiver domain B4599_14195 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) B4599_14195 PF00512 His Kinase A (phospho-acceptor) domain B4599_14195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B4599_14195 PF01627 Hpt domain B4599_14195 PF00672 HAMP domain B4599_14200 PF00072 Response regulator receiver domain B4599_14205 PF01609 Transposase DDE domain B4599_14205 PF05598 Transposase domain (DUF772) B4599_14215 PF05088 Bacterial NAD-glutamate dehydrogenase B4599_14225 PF00529 HlyD membrane-fusion protein of T1SS B4599_14225 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion B4599_14230 PF00873 AcrB/AcrD/AcrF family B4599_14250 PF00356 Bacterial regulatory proteins, lacI family B4599_14255 PF00391 PEP-utilising enzyme, mobile domain B4599_14255 PF00381 PTS HPr component phosphorylation site B4599_14255 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 B4599_14255 PF05524 PEP-utilising enzyme, N-terminal B4599_14255 PF02896 PEP-utilising enzyme, TIM barrel domain B4599_14260 PF00294 pfkB family carbohydrate kinase B4599_14265 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit B4599_14280 PF05598 Transposase domain (DUF772) B4599_14280 PF01609 Transposase DDE domain B4599_14325 PF16671 Actin cross-linking domain B4599_14325 PF04717 Type VI secretion system, phage-baseplate injector B4599_14340 PF16671 Actin cross-linking domain B4599_14340 PF04717 Type VI secretion system, phage-baseplate injector B4599_14355 PF16671 Actin cross-linking domain B4599_14355 PF04717 Type VI secretion system, phage-baseplate injector B4599_14410 PF05598 Transposase domain (DUF772) B4599_14410 PF01609 Transposase DDE domain B4599_14445 PF07715 TonB-dependent Receptor Plug Domain B4599_14445 PF00593 TonB dependent receptor B4599_14455 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain B4599_14455 PF02777 Iron/manganese superoxide dismutases, C-terminal domain B4599_14475 PF01618 MotA/TolQ/ExbB proton channel family B4599_14480 PF00691 OmpA family B4599_14480 PF13677 Membrane MotB of proton-channel complex MotA/MotB B4599_14485 PF13614 AAA domain B4599_14490 PF01584 CheW-like domain B4599_14500 PF00072 Response regulator receiver domain B4599_14505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B4599_14505 PF09078 CheY binding B4599_14505 PF01627 Hpt domain B4599_14505 PF02895 Signal transducing histidine kinase, homodimeric domain B4599_14505 PF01584 CheW-like domain B4599_14520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain B4599_14520 PF00672 HAMP domain B4599_14520 PF02203 Tar ligand binding domain homologue B4599_14535 PF02203 Tar ligand binding domain homologue B4599_14535 PF00672 HAMP domain B4599_14535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain B4599_14545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain B4599_14545 PF00672 HAMP domain B4599_14545 PF02203 Tar ligand binding domain homologue B4599_14555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain B4599_14555 PF00672 HAMP domain B4599_14555 PF02203 Tar ligand binding domain homologue B4599_14565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain B4599_14565 PF00672 HAMP domain B4599_14565 PF02203 Tar ligand binding domain homologue B4599_14570 PF00672 HAMP domain B4599_14570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain B4599_14570 PF02203 Tar ligand binding domain homologue B4599_14585 PF07238 PilZ domain B4599_14585 PF07317 Flagellar regulator YcgR B4599_14590 PF01584 CheW-like domain B4599_14610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain B4599_14610 PF00672 HAMP domain B4599_14610 PF02203 Tar ligand binding domain homologue B4599_14615 PF03705 CheR methyltransferase, all-alpha domain B4599_14615 PF01739 CheR methyltransferase, SAM binding domain B4599_14620 PF03975 CheD chemotactic sensory transduction B4599_14625 PF00072 Response regulator receiver domain B4599_14625 PF01339 CheB methylesterase B4599_14630 PF00563 EAL domain B4599_14630 PF00990 Diguanylate cyclase, GGDEF domain B4599_14630 PF03707 Bacterial signalling protein N terminal repeat B4599_14640 PF00561 alpha/beta hydrolase fold B4599_14645 PF11791 Aconitate B N-terminal domain B4599_14645 PF06434 Aconitate hydratase 2 N-terminus B4599_14645 PF00330 Aconitase family (aconitate hydratase) B4599_14660 PF00694 Aconitase C-terminal domain B4599_14660 PF00330 Aconitase family (aconitate hydratase) B4599_14670 PF00501 AMP-binding enzyme B4599_14670 PF13193 AMP-binding enzyme C-terminal domain B4599_14675 PF00378 Enoyl-CoA hydratase/isomerase B4599_14680 PF01627 Hpt domain B4599_14680 PF00512 His Kinase A (phospho-acceptor) domain B4599_14680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B4599_14680 PF00072 Response regulator receiver domain B4599_14695 PF01336 OB-fold nucleic acid binding domain B4599_14695 PF00152 tRNA synthetases class II (D, K and N) B4599_14720 PF01610 Transposase B4599_14720 PF13542 Helix-turn-helix domain of transposase family ISL3 B4599_14720 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 B4599_14750 PF17768 RecJ OB domain B4599_14750 PF02272 DHHA1 domain B4599_14750 PF01368 DHH family B4599_14760 PF01272 Transcription elongation factor, GreA/GreB, C-term B4599_14760 PF03449 Transcription elongation factor, N-terminal B4599_14765 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain B4599_14765 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain B4599_14765 PF02142 MGS-like domain B4599_14775 PF00117 Glutamine amidotransferase class-I B4599_14775 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain B4599_14780 PF05173 Dihydrodipicolinate reductase, C-terminus B4599_14780 PF01113 Dihydrodipicolinate reductase, N-terminus B4599_14795 PF03473 MOSC domain B4599_14795 PF03475 3-alpha domain B4599_14800 PF00155 Aminotransferase class I and II B4599_14820 PF07664 Ferrous iron transport protein B C terminus B4599_14820 PF07670 Nucleoside recognition B4599_14820 PF02421 Ferrous iron transport protein B B4599_14830 PF00378 Enoyl-CoA hydratase/isomerase B4599_14840 PF00682 HMGL-like B4599_14845 PF00106 short chain dehydrogenase B4599_14850 PF01132 Elongation factor P (EF-P) OB domain B4599_14850 PF08207 Elongation factor P (EF-P) KOW-like domain B4599_14850 PF09285 Elongation factor P, C-terminal B4599_14870 PF00083 Sugar (and other) transporter B4599_14880 PF00370 FGGY family of carbohydrate kinases, N-terminal domain B4599_14880 PF02782 FGGY family of carbohydrate kinases, C-terminal domain B4599_14890 PF16338 Domain of unknown function (DUF4968) B4599_14890 PF17137 Domain of unknown function (DUF5110) B4599_14890 PF01055 Glycosyl hydrolases family 31 B4599_14900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B4599_14900 PF03466 LysR substrate binding domain B4599_14905 PF01081 KDPG and KHG aldolase B4599_14910 PF13378 Enolase C-terminal domain-like B4599_14910 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain B4599_14915 PF08450 SMP-30/Gluconolactonase/LRE-like region B4599_14920 PF05035 2-keto-3-deoxy-galactonokinase B4599_14925 PF11953 Domain of unknown function (DUF3470) B4599_14925 PF00037 4Fe-4S binding domain B4599_14935 PF00701 Dihydrodipicolinate synthetase family B4599_14950 PF00578 AhpC/TSA family B4599_14955 PF13638 PIN domain B4599_14955 PF02562 PhoH-like protein B4599_14965 PF08543 Phosphomethylpyrimidine kinase B4599_14995 PF03466 LysR substrate binding domain B4599_14995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B4599_15000 PF02678 Pirin B4599_15000 PF17954 Quercetinase C-terminal cupin domain B4599_15025 PF03796 DnaB-like helicase C terminal domain B4599_15025 PF00772 DnaB-like helicase N terminal domain B4599_15045 PF02599 Global regulator protein family B4599_15050 PF02272 DHHA1 domain B4599_15050 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain B4599_15050 PF01411 tRNA synthetases class II (A) B4599_15055 PF02631 RecX family B4599_15065 PF00154 recA bacterial DNA recombination protein B4599_15070 PF01726 LexA DNA binding domain B4599_15070 PF00717 Peptidase S24-like B4599_15075 PF03109 ABC1 family B4599_15080 PF02464 Competence-damaged protein B4599_15085 PF01926 50S ribosome-binding GTPase B4599_15085 PF16360 GTP-binding GTPase Middle Region B4599_15085 PF13167 GTP-binding GTPase N-terminal B4599_15090 PF17209 Hfq protein B4599_15100 PF00809 Pterin binding enzyme B4599_15105 PF00004 ATPase family associated with various cellular activities (AAA) B4599_15105 PF17862 AAA+ lid domain B4599_15105 PF06480 FtsH Extracellular B4599_15105 PF01434 Peptidase family M41 B4599_15110 PF01728 FtsJ-like methyltransferase B4599_15115 PF01985 CRS1 / YhbY (CRM) domain B4599_15125 PF01551 Peptidase family M23 B4599_15125 PF01476 LysM domain B4599_15130 PF09335 SNARE associated Golgi protein B4599_15140 PF01975 Survival protein SurE B4599_15145 PF01713 Smr domain B4599_15150 PF01142 tRNA pseudouridine synthase D (TruD) B4599_15155 PF02542 YgbB family B4599_15165 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase B4599_15170 PF04977 Septum formation initiator B4599_15175 PF03952 Enolase, N-terminal domain B4599_15175 PF00113 Enolase, C-terminal TIM barrel domain B4599_15185 PF00793 DAHP synthetase I family B4599_15190 PF06418 CTP synthase N-terminus B4599_15190 PF00117 Glutamine amidotransferase class-I B4599_15200 PF00986 DNA gyrase B subunit, carboxyl terminus B4599_15200 PF01751 Toprim domain B4599_15200 PF00204 DNA gyrase B B4599_15200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B4599_15215 PF02698 DUF218 domain B4599_15220 PF01384 Phosphate transporter family B4599_15235 PF01595 Cyclin M transmembrane N-terminal domain B4599_15235 PF00571 CBS domain B4599_15235 PF03471 Transporter associated domain B4599_15250 PF00296 Luciferase-like monooxygenase B4599_15265 PF07690 Major Facilitator Superfamily B4599_15275 PF00005 ABC transporter B4599_15275 PF00664 ABC transporter transmembrane region B4599_15280 PF00005 ABC transporter B4599_15300 PF13579 Glycosyl transferase 4-like domain B4599_15300 PF00534 Glycosyl transferases group 1 B4599_15320 PF08241 Methyltransferase domain B4599_15335 PF00535 Glycosyl transferase family 2 B4599_15340 PF01943 Polysaccharide biosynthesis protein B4599_15345 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family B4599_15365 PF05523 WxcM-like, C-terminal B4599_15380 PF00034 Cytochrome c B4599_15395 PF04542 Sigma-70 region 2 B4599_15395 PF08281 Sigma-70, region 4 B4599_15405 PF00082 Subtilase family B4599_15410 PF01578 Cytochrome C assembly protein B4599_15415 PF04995 Heme exporter protein D (CcmD) B4599_15420 PF03100 CcmE B4599_15425 PF01578 Cytochrome C assembly protein B4599_15425 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal B4599_15430 PF08534 Redoxin B4599_15435 PF03918 Cytochrome C biogenesis protein B4599_15445 PF03377 TAL effector repeat B4599_15465 PF03377 TAL effector repeat B4599_15485 PF03377 TAL effector repeat B4599_15495 PF00873 AcrB/AcrD/AcrF family B4599_15505 PF00873 AcrB/AcrD/AcrF family B4599_15510 PF00529 HlyD membrane-fusion protein of T1SS B4599_15510 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion B4599_15555 PF00072 Response regulator receiver domain B4599_15555 PF00486 Transcriptional regulatory protein, C terminal B4599_15560 PF03150 Di-haem cytochrome c peroxidase B4599_15560 PF00034 Cytochrome c B4599_15565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B4599_15565 PF00512 His Kinase A (phospho-acceptor) domain B4599_15570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B4599_15570 PF03466 LysR substrate binding domain B4599_15595 PF00069 Protein kinase domain B4599_15635 PF16671 Actin cross-linking domain B4599_15635 PF04717 Type VI secretion system, phage-baseplate injector B4599_15645 PF05598 Transposase domain (DUF772) B4599_15645 PF01609 Transposase DDE domain B4599_15655 PF00004 ATPase family associated with various cellular activities (AAA) B4599_15655 PF07724 AAA domain (Cdc48 subfamily) B4599_15655 PF10431 C-terminal, D2-small domain, of ClpB protein B4599_15655 PF17871 AAA lid domain B4599_15680 PF05638 Type VI secretion system effector, Hcp B4599_15700 PF01609 Transposase DDE domain B4599_15700 PF05598 Transposase domain (DUF772) B4599_15715 PF01609 Transposase DDE domain B4599_15715 PF05598 Transposase domain (DUF772) B4599_15755 PF13276 HTH-like domain B4599_15755 PF13683 Integrase core domain B4599_15765 PF01106 NifU-like domain B4599_15770 PF01329 Pterin 4 alpha carbinolamine dehydratase B4599_15780 PF02535 ZIP Zinc transporter B4599_15785 PF02535 ZIP Zinc transporter B4599_15790 PF11737 Protein of unknown function (DUF3300) B4599_15795 PF00849 RNA pseudouridylate synthase B4599_15795 PF01479 S4 domain B4599_15800 PF00575 S1 RNA binding domain B4599_15800 PF12111 Polyribonucleotide phosphorylase C terminal B4599_15800 PF10150 Ribonuclease E/G family B4599_15815 PF13340 Putative transposase of IS4/5 family (DUF4096) B4599_15820 PF00072 Response regulator receiver domain B4599_15820 PF00196 Bacterial regulatory proteins, luxR family B4599_15830 PF05598 Transposase domain (DUF772) B4599_15830 PF01609 Transposase DDE domain B4599_15840 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase B4599_15850 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain B4599_15850 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain B4599_15850 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain B4599_15860 PF01648 4'-phosphopantetheinyl transferase superfamily B4599_15860 PF17837 4'-phosphopantetheinyl transferase N-terminal domain B4599_15885 PF01609 Transposase DDE domain B4599_15885 PF05598 Transposase domain (DUF772) B4599_15895 PF05598 Transposase domain (DUF772) B4599_15895 PF01609 Transposase DDE domain B4599_15925 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases B4599_15925 PF10414 Sirohaem synthase dimerisation region B4599_15925 PF14824 Sirohaem biosynthesis protein central B4599_15950 PF12804 MobA-like NTP transferase domain B4599_15955 PF03454 MoeA C-terminal region (domain IV) B4599_15955 PF03453 MoeA N-terminal region (domain I and II) B4599_15955 PF00994 Probable molybdopterin binding domain B4599_16020 PF07715 TonB-dependent Receptor Plug Domain B4599_16020 PF00593 TonB dependent receptor B4599_16045 PF04616 Glycosyl hydrolases family 43 B4599_16050 PF07532 Bacterial Ig-like domain (group 4) B4599_16055 PF00593 TonB dependent receptor B4599_16055 PF07715 TonB-dependent Receptor Plug Domain B4599_16065 PF09286 Pro-kumamolisin, activation domain B4599_16065 PF00082 Subtilase family B4599_16105 PF13520 Amino acid permease B4599_16120 PF01321 Creatinase/Prolidase N-terminal domain B4599_16120 PF00557 Metallopeptidase family M24 B4599_16125 PF00171 Aldehyde dehydrogenase family B4599_16130 PF00701 Dihydrodipicolinate synthetase family B4599_16135 PF04324 BFD-like [2Fe-2S] binding domain B4599_16135 PF07992 Pyridine nucleotide-disulphide oxidoreductase B4599_16145 PF01266 FAD dependent oxidoreductase B4599_16150 PF05544 Proline racemase B4599_16160 PF00448 SRP54-type protein, GTPase domain B4599_16160 PF02881 SRP54-type protein, helical bundle domain B4599_16175 PF00633 Helix-hairpin-helix motif B4599_16175 PF00730 HhH-GPD superfamily base excision DNA repair protein B4599_16175 PF14815 NUDIX domain B4599_16180 PF04362 Bacterial Fe(2+) trafficking B4599_16185 PF13426 PAS domain B4599_16185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B4599_16185 PF00072 Response regulator receiver domain B4599_16270 PF08212 Lipocalin-like domain B4599_16305 PF03808 Glycosyl transferase WecB/TagA/CpsF family B4599_16320 PF14667 Polysaccharide biosynthesis C-terminal domain B4599_16330 PF00534 Glycosyl transferases group 1 B4599_16330 PF13439 Glycosyltransferase Family 4 B4599_16350 PF02397 Bacterial sugar transferase B4599_16370 PF13411 MerR HTH family regulatory protein B4599_16375 PF00216 Bacterial DNA-binding protein B4599_16380 PF03483 B3/4 domain B4599_16380 PF03484 tRNA synthetase B5 domain B4599_16380 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain B4599_16380 PF01588 Putative tRNA binding domain B4599_16380 PF03147 Ferredoxin-fold anticodon binding domain B4599_16385 PF01409 tRNA synthetases class II core domain (F) B4599_16385 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain B4599_16390 PF00453 Ribosomal protein L20 B4599_16395 PF01632 Ribosomal protein L35 B4599_16400 PF00707 Translation initiation factor IF-3, C-terminal domain B4599_16400 PF05198 Translation initiation factor IF-3, N-terminal domain B4599_16405 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) B4599_16405 PF02824 TGS domain B4599_16405 PF03129 Anticodon binding domain B4599_16405 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain B4599_16420 PF01527 Transposase B4599_16445 PF02151 UvrB/uvrC motif B4599_16445 PF04851 Type III restriction enzyme, res subunit B4599_16445 PF00271 Helicase conserved C-terminal domain B4599_16445 PF12344 Ultra-violet resistance protein B B4599_16445 PF17757 UvrB interaction domain B4599_16450 PF00114 Pilin (bacterial filament) B4599_16450 PF07963 Prokaryotic N-terminal methylation motif B4599_16460 PF00114 Pilin (bacterial filament) B4599_16460 PF07963 Prokaryotic N-terminal methylation motif B4599_16495 PF07963 Prokaryotic N-terminal methylation motif B4599_16495 PF12019 Type II transport protein GspH B4599_16500 PF11892 Domain of unknown function (DUF3412) B4599_16500 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases B4599_16500 PF03641 Possible lysine decarboxylase B4599_16505 PF00593 TonB dependent receptor B4599_16515 PF01914 MarC family integral membrane protein B4599_16525 PF00462 Glutaredoxin B4599_16530 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain B4599_16530 PF02777 Iron/manganese superoxide dismutases, C-terminal domain B4599_16535 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain B4599_16535 PF02222 ATP-grasp domain B4599_16540 PF00731 AIR carboxylase B4599_16550 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain B4599_16550 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain B4599_16560 PF00575 S1 RNA binding domain B4599_16560 PF01138 3' exoribonuclease family, domain 1 B4599_16560 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain B4599_16560 PF00013 KH domain B4599_16560 PF03725 3' exoribonuclease family, domain 2 B4599_16565 PF00312 Ribosomal protein S15 B4599_16570 PF16198 tRNA pseudouridylate synthase B C-terminal domain B4599_16570 PF09157 Pseudouridine synthase II TruB, C-terminal B4599_16570 PF01509 TruB family pseudouridylate synthase (N terminal domain) B4599_16575 PF02033 Ribosome-binding factor A B4599_16580 PF04760 Translation initiation factor IF-2, N-terminal region B4599_16580 PF00009 Elongation factor Tu GTP binding domain B4599_16580 PF11987 Translation-initiation factor 2 B4599_16580 PF08364 Bacterial translation initiation factor IF-2 associated region B4599_16585 PF13184 NusA-like KH domain B4599_16585 PF08529 NusA N-terminal domain B4599_16585 PF00575 S1 RNA binding domain B4599_16590 PF17384 RimP C-terminal SH3 domain B4599_16590 PF02576 RimP N-terminal domain B4599_16600 PF00361 Proton-conducting membrane transporter B4599_16605 PF00361 Proton-conducting membrane transporter B4599_16605 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus B4599_16610 PF00361 Proton-conducting membrane transporter B4599_16610 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus B4599_16615 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L B4599_16620 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 B4599_16625 PF12838 4Fe-4S dicluster domain B4599_16630 PF00146 NADH dehydrogenase B4599_16635 PF00384 Molybdopterin oxidoreductase B4599_16635 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region B4599_16635 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal B4599_16640 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit B4599_16640 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region B4599_16640 PF10531 SLBB domain B4599_16650 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit B4599_16655 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit B4599_16660 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit B4599_16665 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 B4599_16680 PF00121 Triosephosphate isomerase B4599_16705 PF13340 Putative transposase of IS4/5 family (DUF4096) B4599_16715 PF00990 Diguanylate cyclase, GGDEF domain B4599_16715 PF00563 EAL domain B4599_16715 PF03707 Bacterial signalling protein N terminal repeat B4599_16730 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III B4599_16730 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I B4599_16730 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain B4599_16730 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II B4599_16735 PF01039 Carboxyl transferase domain B4599_16735 PF17848 Acetyl-coA carboxylase zinc finger domain B4599_16740 PF00290 Tryptophan synthase alpha chain B4599_16750 PF00291 Pyridoxal-phosphate dependent enzyme B4599_16755 PF03466 LysR substrate binding domain B4599_16755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B4599_16760 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase B4599_16765 PF01416 tRNA pseudouridine synthase B4599_16790 PF01118 Semialdehyde dehydrogenase, NAD binding domain B4599_16790 PF02774 Semialdehyde dehydrogenase, dimerisation domain B4599_16795 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain B4599_16795 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain B4599_16800 PF01264 Chorismate synthase B4599_16805 PF05175 Methyltransferase small domain B4599_16810 PF02630 SCO1/SenC B4599_16815 PF02666 Phosphatidylserine decarboxylase B4599_16835 PF05872 Bacterial protein of unknown function (DUF853) B4599_16855 PF03449 Transcription elongation factor, N-terminal B4599_16855 PF01272 Transcription elongation factor, GreA/GreB, C-term B4599_16860 PF18693 TRAM domain B4599_16860 PF00919 Uncharacterized protein family UPF0004 B4599_16860 PF04055 Radical SAM superfamily B4599_16865 PF01738 Dienelactone hydrolase family B4599_16885 PF00692 dUTPase B4599_16890 PF10609 NUBPL iron-transfer P-loop NTPase B4599_16920 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain B4599_16920 PF07992 Pyridine nucleotide-disulphide oxidoreductase B4599_16935 PF01266 FAD dependent oxidoreductase B4599_16940 PF04235 Protein of unknown function (DUF418) B4599_16945 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase B4599_16950 PF00877 NlpC/P60 family B4599_16955 PF00877 NlpC/P60 family B4599_16975 PF00245 Alkaline phosphatase B4599_16980 PF01171 PP-loop family B4599_16980 PF09179 TilS substrate binding domain B4599_16980 PF11734 TilS substrate C-terminal domain B4599_16985 PF02609 Exonuclease VII small subunit B4599_16990 PF00348 Polyprenyl synthetase B4599_17010 PF01523 Putative modulator of DNA gyrase B4599_17015 PF04751 Protein of unknown function (DUF615) B4599_17020 PF01523 Putative modulator of DNA gyrase B4599_17030 PF13116 Protein of unknown function B4599_17030 PF13502 AsmA-like C-terminal region B4599_17035 PF00575 S1 RNA binding domain B4599_17035 PF10150 Ribonuclease E/G family B4599_17040 PF02545 Maf-like protein B4599_17045 PF04402 Protein of unknown function (DUF541) B4599_17070 PF02590 Predicted SPOUT methyltransferase B4599_17095 PF01467 Cytidylyltransferase-like B4599_17115 PF08264 Anticodon-binding domain of tRNA B4599_17115 PF00133 tRNA synthetases class I (I, L, M and V) B4599_17115 PF13603 Leucyl-tRNA synthetase, Domain 2 B4599_17125 PF00085 Thioredoxin B4599_17140 PF13340 Putative transposase of IS4/5 family (DUF4096) B4599_17200 PF13340 Putative transposase of IS4/5 family (DUF4096) B4599_17210 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) B4599_17210 PF00128 Alpha amylase, catalytic domain B4599_17215 PF05598 Transposase domain (DUF772) B4599_17215 PF01609 Transposase DDE domain B4599_17220 PF05598 Transposase domain (DUF772) B4599_17220 PF01609 Transposase DDE domain B4599_17240 PF13340 Putative transposase of IS4/5 family (DUF4096) B4599_17270 PF13276 HTH-like domain B4599_17270 PF13683 Integrase core domain B4599_17275 PF01527 Transposase B4599_17300 PF00657 GDSL-like Lipase/Acylhydrolase B4599_17300 PF03797 Autotransporter beta-domain B4599_17310 PF05690 Thiazole biosynthesis protein ThiG B4599_17315 PF02390 Putative methyltransferase B4599_17320 PF03600 Citrate transporter B4599_17320 PF02080 TrkA-C domain B4599_17345 PF01557 Fumarylacetoacetate (FAA) hydrolase family B4599_17350 PF01741 Large-conductance mechanosensitive channel, MscL B4599_17365 PF13340 Putative transposase of IS4/5 family (DUF4096) B4599_17380 PF08032 RNA 2'-O ribose methyltransferase substrate binding B4599_17380 PF00588 SpoU rRNA Methylase family B4599_17410 PF01433 Peptidase family M1 domain B4599_17410 PF11838 ERAP1-like C-terminal domain B4599_17415 PF00873 AcrB/AcrD/AcrF family B4599_17420 PF00529 HlyD membrane-fusion protein of T1SS B4599_17420 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion B4599_17425 PF00009 Elongation factor Tu GTP binding domain B4599_17430 PF01507 Phosphoadenosine phosphosulfate reductase family B4599_17435 PF00667 FAD binding domain B4599_17435 PF00258 Flavodoxin B4599_17435 PF00175 Oxidoreductase NAD-binding domain B4599_17440 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain B4599_17440 PF01077 Nitrite and sulphite reductase 4Fe-4S domain B4599_17445 PF01507 Phosphoadenosine phosphosulfate reductase family B4599_17465 PF00672 HAMP domain B4599_17465 PF00072 Response regulator receiver domain B4599_17465 PF01627 Hpt domain B4599_17465 PF00512 His Kinase A (phospho-acceptor) domain B4599_17465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B4599_17490 PF03466 LysR substrate binding domain B4599_17490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B4599_17495 PF10414 Sirohaem synthase dimerisation region B4599_17495 PF14824 Sirohaem biosynthesis protein central B4599_17495 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases B4599_17500 PF00291 Pyridoxal-phosphate dependent enzyme B4599_17515 PF01661 Macro domain B4599_17520 PF00274 Fructose-bisphosphate aldolase class-I B4599_17525 PF02887 Pyruvate kinase, alpha/beta domain B4599_17525 PF00224 Pyruvate kinase, barrel domain B4599_17535 PF00162 Phosphoglycerate kinase B4599_17555 PF13340 Putative transposase of IS4/5 family (DUF4096) B4599_17585 PF00199 Catalase B4599_17585 PF18011 C-terminal domain found in long catalases B4599_17585 PF06628 Catalase-related immune-responsive B4599_17610 PF01609 Transposase DDE domain B4599_17610 PF05598 Transposase domain (DUF772) B4599_17635 PF02311 AraC-like ligand binding domain B4599_17635 PF12833 Helix-turn-helix domain B4599_17655 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region B4599_17655 PF00326 Prolyl oligopeptidase family B4599_17655 PF07676 WD40-like Beta Propeller Repeat B4599_17680 PF01609 Transposase DDE domain B4599_17680 PF05598 Transposase domain (DUF772) B4599_17685 PF03169 OPT oligopeptide transporter protein B4599_17705 PF02811 PHP domain B4599_17705 PF14579 Helix-hairpin-helix motif B4599_17705 PF17657 Bacterial DNA polymerase III alpha subunit finger domain B4599_17705 PF07733 Bacterial DNA polymerase III alpha NTPase domain B4599_17725 PF00717 Peptidase S24-like B4599_17725 PF01726 LexA DNA binding domain B4599_17755 PF00300 Histidine phosphatase superfamily (branch 1) B4599_17755 PF13456 Reverse transcriptase-like B4599_17790 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) B4599_17790 PF18766 SWI2/SNF2 ATPase B4599_17790 PF11867 Domain of unknown function (DUF3387) B4599_17805 PF01909 Nucleotidyltransferase domain B4599_17810 PF08780 Nucleotidyltransferase substrate binding protein like B4599_17815 PF02384 N-6 DNA Methylase B4599_17835 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) B4599_17835 PF00271 Helicase conserved C-terminal domain B4599_17835 PF04851 Type III restriction enzyme, res subunit B4599_17835 PF08463 EcoEI R protein C-terminal B4599_17845 PF02384 N-6 DNA Methylase B4599_17850 PF01420 Type I restriction modification DNA specificity domain B4599_17925 PF04717 Type VI secretion system, phage-baseplate injector B4599_17925 PF16671 Actin cross-linking domain B4599_17935 PF07724 AAA domain (Cdc48 subfamily) B4599_17935 PF17871 AAA lid domain B4599_17935 PF10431 C-terminal, D2-small domain, of ClpB protein B4599_17935 PF00004 ATPase family associated with various cellular activities (AAA) B4599_17990 PF16671 Actin cross-linking domain B4599_17990 PF04717 Type VI secretion system, phage-baseplate injector B4599_18015 PF04717 Type VI secretion system, phage-baseplate injector B4599_18015 PF16671 Actin cross-linking domain B4599_18025 PF04717 Type VI secretion system, phage-baseplate injector B4599_18025 PF16671 Actin cross-linking domain B4599_18035 PF05598 Transposase domain (DUF772) B4599_18035 PF01609 Transposase DDE domain B4599_18040 PF00182 Chitinase class I B4599_18045 PF16671 Actin cross-linking domain B4599_18045 PF04717 Type VI secretion system, phage-baseplate injector B4599_18055 PF04717 Type VI secretion system, phage-baseplate injector B4599_18055 PF16671 Actin cross-linking domain B4599_18105 PF16671 Actin cross-linking domain B4599_18105 PF04717 Type VI secretion system, phage-baseplate injector B4599_18130 PF04717 Type VI secretion system, phage-baseplate injector B4599_18135 PF03781 Sulfatase-modifying factor enzyme 1 B4599_18195 PF03781 Sulfatase-modifying factor enzyme 1 B4599_18205 PF03781 Sulfatase-modifying factor enzyme 1 B4599_18215 PF04717 Type VI secretion system, phage-baseplate injector B4599_18230 PF00691 OmpA family B4599_18230 PF04972 BON domain B4599_18265 PF01527 Transposase B4599_18270 PF02222 ATP-grasp domain B4599_18295 PF00730 HhH-GPD superfamily base excision DNA repair protein B4599_18310 PF00072 Response regulator receiver domain B4599_18310 PF00196 Bacterial regulatory proteins, luxR family B4599_18315 PF07730 Histidine kinase B4599_18330 PF03775 Septum formation inhibitor MinC, C-terminal domain B4599_18330 PF05209 Septum formation inhibitor MinC, N-terminal domain B4599_18335 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain B4599_18340 PF03776 Septum formation topological specificity factor MinE B4599_18350 PF00512 His Kinase A (phospho-acceptor) domain B4599_18350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B4599_18350 PF08521 Two-component sensor kinase N-terminal B4599_18355 PF00072 Response regulator receiver domain B4599_18355 PF00486 Transcriptional regulatory protein, C terminal B4599_18360 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase B4599_18370 PF00884 Sulfatase B4599_18370 PF08019 Phosphoethanolamine transferase EptA/EptB B4599_18390 PF03412 Peptidase C39 family B4599_18390 PF00005 ABC transporter B4599_18390 PF00664 ABC transporter transmembrane region B4599_18410 PF02347 Glycine cleavage system P-protein B4599_18450 PF13340 Putative transposase of IS4/5 family (DUF4096) B4599_18465 PF01196 Ribosomal protein L17 B4599_18470 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain B4599_18470 PF01000 RNA polymerase Rpb3/RpoA insert domain B4599_18470 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain B4599_18475 PF01479 S4 domain B4599_18475 PF00163 Ribosomal protein S4/S9 N-terminal domain B4599_18480 PF00411 Ribosomal protein S11 B4599_18485 PF00416 Ribosomal protein S13/S18 B4599_18490 PF00344 SecY translocase B4599_18495 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A B4599_18500 PF00327 Ribosomal protein L30p/L7e B4599_18505 PF00333 Ribosomal protein S5, N-terminal domain B4599_18505 PF03719 Ribosomal protein S5, C-terminal domain B4599_18510 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast B4599_18515 PF00347 Ribosomal protein L6 B4599_18520 PF00410 Ribosomal protein S8 B4599_18525 PF00253 Ribosomal protein S14p/S29e B4599_18530 PF00673 ribosomal L5P family C-terminus B4599_18530 PF00281 Ribosomal protein L5 B4599_18535 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 B4599_18535 PF00467 KOW motif B4599_18540 PF00238 Ribosomal protein L14p/L23e B4599_18545 PF00366 Ribosomal protein S17 B4599_18550 PF00831 Ribosomal L29 protein B4599_18555 PF00252 Ribosomal protein L16p/L10e B4599_18560 PF00189 Ribosomal protein S3, C-terminal domain B4599_18560 PF07650 KH domain B4599_18565 PF00237 Ribosomal protein L22p/L17e B4599_18570 PF00203 Ribosomal protein S19 B4599_18575 PF00181 Ribosomal Proteins L2, RNA binding domain B4599_18575 PF03947 Ribosomal Proteins L2, C-terminal domain B4599_18580 PF00276 Ribosomal protein L23 B4599_18585 PF00573 Ribosomal protein L4/L1 family B4599_18590 PF00297 Ribosomal protein L3 B4599_18595 PF00338 Ribosomal protein S10p/S20e B4599_18605 PF03143 Elongation factor Tu C-terminal domain B4599_18605 PF03144 Elongation factor Tu domain 2 B4599_18605 PF00009 Elongation factor Tu GTP binding domain B4599_18610 PF00679 Elongation factor G C-terminus B4599_18610 PF14492 Elongation Factor G, domain II B4599_18610 PF03144 Elongation factor Tu domain 2 B4599_18610 PF00009 Elongation factor Tu GTP binding domain B4599_18610 PF03764 Elongation factor G, domain IV B4599_18615 PF00177 Ribosomal protein S7p/S5e B4599_18620 PF00164 Ribosomal protein S12/S23 B4599_18625 PF00623 RNA polymerase Rpb1, domain 2 B4599_18625 PF04998 RNA polymerase Rpb1, domain 5 B4599_18625 PF04983 RNA polymerase Rpb1, domain 3 B4599_18625 PF04997 RNA polymerase Rpb1, domain 1 B4599_18625 PF05000 RNA polymerase Rpb1, domain 4 B4599_18630 PF00562 RNA polymerase Rpb2, domain 6 B4599_18630 PF04565 RNA polymerase Rpb2, domain 3 B4599_18630 PF04561 RNA polymerase Rpb2, domain 2 B4599_18630 PF04563 RNA polymerase beta subunit B4599_18630 PF04560 RNA polymerase Rpb2, domain 7 B4599_18630 PF10385 RNA polymerase beta subunit external 1 domain B4599_18635 PF16320 Ribosomal protein L7/L12 dimerisation domain B4599_18635 PF00542 Ribosomal protein L7/L12 C-terminal domain B4599_18640 PF00466 Ribosomal protein L10 B4599_18645 PF00687 Ribosomal protein L1p/L10e family B4599_18650 PF00298 Ribosomal protein L11, RNA binding domain B4599_18650 PF03946 Ribosomal protein L11, N-terminal domain B4599_18660 PF00467 KOW motif B4599_18660 PF02357 Transcription termination factor nusG B4599_18665 PF00584 SecE/Sec61-gamma subunits of protein translocation complex B4599_18675 PF03143 Elongation factor Tu C-terminal domain B4599_18675 PF03144 Elongation factor Tu domain 2 B4599_18675 PF00009 Elongation factor Tu GTP binding domain B4599_18695 PF06071 Protein of unknown function (DUF933) B4599_18695 PF01926 50S ribosome-binding GTPase B4599_18700 PF01195 Peptidyl-tRNA hydrolase B4599_18705 PF01386 Ribosomal L25p family B4599_18705 PF14693 Ribosomal protein TL5, C-terminal domain B4599_18710 PF14572 Phosphoribosyl synthetase-associated domain B4599_18710 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase B4599_18720 PF08544 GHMP kinases C terminal B4599_18720 PF00288 GHMP kinases N terminal domain B4599_18725 PF03550 Outer membrane lipoprotein LolB B4599_18735 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain B4599_18735 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain B4599_18735 PF01488 Shikimate / quinate 5-dehydrogenase B4599_18740 PF03462 PCRF domain B4599_18740 PF00472 RF-1 domain B4599_18750 PF00994 Probable molybdopterin binding domain B4599_18755 PF03976 Polyphosphate kinase 2 (PPK2) B4599_18765 PF00708 Acylphosphatase B4599_18770 PF08534 Redoxin B4599_18775 PF03631 Virulence factor BrkB B4599_18780 PF03358 NADPH-dependent FMN reductase B4599_18795 PF17189 Glycosyl hydrolase family 30 beta sandwich domain B4599_18795 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain B4599_18805 PF04073 Aminoacyl-tRNA editing domain B4599_18815 PF01063 Amino-transferase class IV B4599_18845 PF02233 NAD(P) transhydrogenase beta subunit B4599_18850 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch B4599_18870 PF05222 Alanine dehydrogenase/PNT, N-terminal domain B4599_18870 PF01262 Alanine dehydrogenase/PNT, C-terminal domain B4599_18870 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch B4599_18885 PF01367 5'-3' exonuclease, C-terminal SAM fold B4599_18885 PF01612 3'-5' exonuclease B4599_18885 PF00476 DNA polymerase family A B4599_18885 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain B4599_18890 PF00293 NUDIX domain B4599_18900 PF00561 alpha/beta hydrolase fold B4599_18930 PF17827 PrmC N-terminal domain B4599_18930 PF05175 Methyltransferase small domain B4599_18935 PF00578 AhpC/TSA family B4599_18935 PF10417 C-terminal domain of 1-Cys peroxiredoxin B4599_18940 PF07992 Pyridine nucleotide-disulphide oxidoreductase B4599_18940 PF13192 Thioredoxin domain B4599_18945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B4599_18945 PF03466 LysR substrate binding domain B4599_18955 PF01272 Transcription elongation factor, GreA/GreB, C-term B4599_18955 PF03449 Transcription elongation factor, N-terminal B4599_18960 PF00923 Transaldolase/Fructose-6-phosphate aldolase B4599_18990 PF01625 Peptide methionine sulfoxide reductase B4599_19020 PF00462 Glutaredoxin B4599_19025 PF01435 Peptidase family M48 B4599_19025 PF13181 Tetratricopeptide repeat B4599_19030 PF00072 Response regulator receiver domain B4599_19030 PF00486 Transcriptional regulatory protein, C terminal B4599_19035 PF00989 PAS fold B4599_19035 PF11808 Phosphate regulon sensor protein PhoR B4599_19035 PF00512 His Kinase A (phospho-acceptor) domain B4599_19035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B4599_19040 PF17941 Polyphosphate kinase C-terminal domain 1 B4599_19040 PF13090 Polyphosphate kinase C-terminal domain 2 B4599_19040 PF02503 Polyphosphate kinase middle domain B4599_19040 PF13089 Polyphosphate kinase N-terminal domain B4599_19045 PF02541 Ppx/GppA phosphatase family B4599_19050 PF00534 Glycosyl transferases group 1 B4599_19050 PF13439 Glycosyltransferase Family 4 B4599_19055 PF01569 PAP2 superfamily B4599_19060 PF00149 Calcineurin-like phosphoesterase B4599_19080 PF04305 Protein of unknown function (DUF455) B4599_19085 PF00156 Phosphoribosyl transferase domain B4599_19100 PF02875 Mur ligase family, glutamate ligase domain B4599_19100 PF08245 Mur ligase middle domain B4599_19110 PF00300 Histidine phosphatase superfamily (branch 1) B4599_19115 PF10459 Peptidase S46 B4599_19135 PF00107 Zinc-binding dehydrogenase B4599_19135 PF08240 Alcohol dehydrogenase GroES-like domain B4599_19145 PF12857 TOBE-like domain B4599_19145 PF00005 ABC transporter B4599_19145 PF17850 CysA C-terminal regulatory domain B4599_19150 PF00528 Binding-protein-dependent transport system inner membrane component B4599_19155 PF00528 Binding-protein-dependent transport system inner membrane component B4599_19165 PF00155 Aminotransferase class I and II B4599_19175 PF00849 RNA pseudouridylate synthase B4599_19185 PF05736 OprF membrane domain B4599_19185 PF00691 OmpA family B4599_19195 PF00107 Zinc-binding dehydrogenase B4599_19195 PF08240 Alcohol dehydrogenase GroES-like domain B4599_19200 PF07992 Pyridine nucleotide-disulphide oxidoreductase B4599_19200 PF00724 NADH:flavin oxidoreductase / NADH oxidase family B4599_19240 PF17149 Periplasmic sensor domain found in signal transduction proteins B4599_19240 PF00072 Response regulator receiver domain B4599_19240 PF01627 Hpt domain B4599_19240 PF00512 His Kinase A (phospho-acceptor) domain B4599_19240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B4599_19240 PF00672 HAMP domain B4599_19245 PF00990 Diguanylate cyclase, GGDEF domain B4599_19245 PF00072 Response regulator receiver domain B4599_19265 PF00749 tRNA synthetases class I (E and Q), catalytic domain B4599_19265 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain B4599_19285 PF13340 Putative transposase of IS4/5 family (DUF4096) B4599_19325 PF01728 FtsJ-like methyltransferase B4599_19325 PF18125 RlmM ferredoxin-like domain B4599_19330 PF02894 Oxidoreductase family, C-terminal alpha/beta domain B4599_19330 PF01408 Oxidoreductase family, NAD-binding Rossmann fold B4599_19335 PF08450 SMP-30/Gluconolactonase/LRE-like region B4599_19355 PF00378 Enoyl-CoA hydratase/isomerase B4599_19360 PF00171 Aldehyde dehydrogenase family B4599_19365 PF00501 AMP-binding enzyme B4599_19365 PF13193 AMP-binding enzyme C-terminal domain B4599_19370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B4599_19370 PF03466 LysR substrate binding domain B4599_19380 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase B4599_19410 PF01494 FAD binding domain B4599_19415 PF01494 FAD binding domain B4599_19425 PF01923 Cobalamin adenosyltransferase B4599_19430 PF00850 Histone deacetylase domain B4599_19435 PF03968 OstA-like protein B4599_19435 PF04453 LPS transport system D B4599_19440 PF00639 PPIC-type PPIASE domain B4599_19440 PF09312 SurA N-terminal domain B4599_19445 PF04166 Pyridoxal phosphate biosynthetic protein PdxA B4599_19455 PF00398 Ribosomal RNA adenine dimethylase B4599_19460 PF04379 ApaG domain B4599_19465 PF00149 Calcineurin-like phosphoesterase B4599_19470 PF00186 Dihydrofolate reductase B4599_19480 PF00303 Thymidylate synthase B4599_19485 PF01790 Prolipoprotein diacylglyceryl transferase B4599_19505 PF01219 Prokaryotic diacylglycerol kinase B4599_19520 PF00512 His Kinase A (phospho-acceptor) domain B4599_19520 PF08521 Two-component sensor kinase N-terminal B4599_19520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B4599_19525 PF00486 Transcriptional regulatory protein, C terminal B4599_19525 PF00072 Response regulator receiver domain B4599_19530 PF13472 GDSL-like Lipase/Acylhydrolase family B4599_19535 PF00005 ABC transporter B4599_19545 PF02668 Taurine catabolism dioxygenase TauD, TfdA family B4599_19595 PF00248 Aldo/keto reductase family B4599_19605 PF07662 Na+ dependent nucleoside transporter C-terminus B4599_19605 PF01773 Na+ dependent nucleoside transporter N-terminus B4599_19605 PF07670 Nucleoside recognition B4599_19610 PF00294 pfkB family carbohydrate kinase B4599_19630 PF01207 Dihydrouridine synthase (Dus) B4599_19645 PF00438 S-adenosylmethionine synthetase, N-terminal domain B4599_19645 PF02772 S-adenosylmethionine synthetase, central domain B4599_19645 PF02773 S-adenosylmethionine synthetase, C-terminal domain B4599_19655 PF13340 Putative transposase of IS4/5 family (DUF4096) B4599_19660 PF00328 Histidine phosphatase superfamily (branch 2) B4599_19690 PF00311 Phosphoenolpyruvate carboxylase B4599_19700 PF05221 S-adenosyl-L-homocysteine hydrolase B4599_19700 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain B4599_19705 PF13649 Methyltransferase domain B4599_19740 PF01408 Oxidoreductase family, NAD-binding Rossmann fold B4599_19760 PF09286 Pro-kumamolisin, activation domain B4599_19760 PF00082 Subtilase family B4599_19765 PF00550 Phosphopantetheine attachment site B4599_19765 PF08659 KR domain B4599_19765 PF00698 Acyl transferase domain B4599_19765 PF00109 Beta-ketoacyl synthase, N-terminal domain B4599_19765 PF16197 Ketoacyl-synthetase C-terminal extension B4599_19765 PF00107 Zinc-binding dehydrogenase B4599_19765 PF08240 Alcohol dehydrogenase GroES-like domain B4599_19765 PF14765 Polyketide synthase dehydratase B4599_19765 PF02801 Beta-ketoacyl synthase, C-terminal domain B4599_19780 PF02219 Methylenetetrahydrofolate reductase B4599_19800 PF00293 NUDIX domain B4599_19810 PF02810 SEC-C motif B4599_19810 PF07517 SecA DEAD-like domain B4599_19810 PF01043 SecA preprotein cross-linking domain B4599_19810 PF07516 SecA Wing and Scaffold domain B4599_19815 PF01476 LysM domain B4599_19815 PF01551 Peptidase family M23 B4599_19825 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase B4599_19830 PF00091 Tubulin/FtsZ family, GTPase domain B4599_19830 PF12327 FtsZ family, C-terminal domain B4599_19835 PF02491 SHS2 domain inserted in FTSA B4599_19840 PF03799 Cell division protein FtsQ B4599_19840 PF08478 POTRA domain, FtsQ-type B4599_19845 PF01820 D-ala D-ala ligase N-terminus B4599_19845 PF07478 D-ala D-ala ligase C-terminus B4599_19850 PF01225 Mur ligase family, catalytic domain B4599_19850 PF08245 Mur ligase middle domain B4599_19850 PF02875 Mur ligase family, glutamate ligase domain B4599_19855 PF04101 Glycosyltransferase family 28 C-terminal domain B4599_19855 PF03033 Glycosyltransferase family 28 N-terminal domain B4599_19860 PF01098 Cell cycle protein B4599_19865 PF00953 Glycosyl transferase family 4 B4599_19870 PF01225 Mur ligase family, catalytic domain B4599_19870 PF02875 Mur ligase family, glutamate ligase domain B4599_19870 PF08245 Mur ligase middle domain B4599_19875 PF08245 Mur ligase middle domain B4599_19875 PF02875 Mur ligase family, glutamate ligase domain B4599_19875 PF01225 Mur ligase family, catalytic domain B4599_19880 PF00905 Penicillin binding protein transpeptidase domain B4599_19880 PF03717 Penicillin-binding Protein dimerisation domain B4599_19885 PF04999 Cell division protein FtsL B4599_19890 PF01795 MraW methylase family B4599_19895 PF02381 MraZ protein, putative antitoxin-like B4599_19915 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases B4599_19925 PF02021 Uncharacterised protein family UPF0102 B4599_19930 PF04307 LexA-binding, inner membrane-associated putative hydrolase B4599_19935 PF01565 FAD binding domain B4599_19935 PF02913 FAD linked oxidases, C-terminal domain B4599_19940 PF00072 Response regulator receiver domain B4599_19940 PF00486 Transcriptional regulatory protein, C terminal B4599_19945 PF13493 Domain of unknown function (DUF4118) B4599_19945 PF13492 GAF domain B4599_19945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B4599_19945 PF00512 His Kinase A (phospho-acceptor) domain B4599_19945 PF02702 Osmosensitive K+ channel His kinase sensor domain B4599_19950 PF02669 K+-transporting ATPase, c chain B4599_19960 PF03814 Potassium-transporting ATPase A subunit B4599_19990 PF02769 AIR synthase related protein, C-terminal domain B4599_19990 PF00586 AIR synthase related protein, N-terminal domain B4599_19995 PF01029 NusB family B4599_20000 PF00885 6,7-dimethyl-8-ribityllumazine synthase B4599_20005 PF00925 GTP cyclohydrolase II B4599_20005 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase B4599_20010 PF00677 Lumazine binding domain B4599_20020 PF01872 RibD C-terminal domain B4599_20020 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region B4599_20030 PF03477 ATP cone domain B4599_20040 PF00464 Serine hydroxymethyltransferase B4599_20060 PF12848 ABC transporter B4599_20060 PF00005 ABC transporter B4599_20080 PF00756 Putative esterase B4599_20090 PF08240 Alcohol dehydrogenase GroES-like domain B4599_20090 PF00107 Zinc-binding dehydrogenase B4599_20095 PF02583 Metal-sensitive transcriptional repressor B4599_20105 PF00072 Response regulator receiver domain B4599_20105 PF00486 Transcriptional regulatory protein, C terminal B4599_20110 PF00672 HAMP domain B4599_20110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B4599_20110 PF00512 His Kinase A (phospho-acceptor) domain B4599_20110 PF16527 Two-component sensor protein CpxA, periplasmic domain B4599_20145 PF00672 HAMP domain B4599_20145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B4599_20145 PF00512 His Kinase A (phospho-acceptor) domain B4599_20150 PF04107 Glutamate-cysteine ligase family 2(GCS2) B4599_20165 PF01926 50S ribosome-binding GTPase B4599_20170 PF00034 Cytochrome c B4599_20200 PF05598 Transposase domain (DUF772) B4599_20200 PF01609 Transposase DDE domain B4599_20205 PF00291 Pyridoxal-phosphate dependent enzyme B4599_20205 PF13291 ACT domain B4599_20210 PF13340 Putative transposase of IS4/5 family (DUF4096) B4599_20220 PF01609 Transposase DDE domain B4599_20220 PF05598 Transposase domain (DUF772) B4599_20230 PF01527 Transposase B4599_20255 PF01966 HD domain B4599_20255 PF12627 Probable RNA and SrmB- binding site of polymerase A B4599_20255 PF01743 Poly A polymerase head domain B4599_20270 PF05598 Transposase domain (DUF772) B4599_20270 PF01609 Transposase DDE domain B4599_20280 PF13340 Putative transposase of IS4/5 family (DUF4096) B4599_20315 PF01522 Polysaccharide deacetylase B4599_20315 PF14883 Hypothetical glycosyl hydrolase family 13 B4599_20320 PF00535 Glycosyl transferase family 2 B4599_20330 PF01979 Amidohydrolase family B4599_20335 PF01380 SIS domain B4599_20340 PF00356 Bacterial regulatory proteins, lacI family B4599_20345 PF07690 Major Facilitator Superfamily B4599_20365 PF16355 Domain of unknown function (DUF4982) B4599_20365 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 B4599_20365 PF02837 Glycosyl hydrolases family 2, sugar binding domain B4599_20365 PF00703 Glycosyl hydrolases family 2 B4599_20365 PF02836 Glycosyl hydrolases family 2, TIM barrel domain B4599_20400 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) B4599_20405 PF00512 His Kinase A (phospho-acceptor) domain B4599_20405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B4599_20410 PF00072 Response regulator receiver domain B4599_20415 PF00512 His Kinase A (phospho-acceptor) domain B4599_20415 PF08446 PAS fold B4599_20415 PF00360 Phytochrome region B4599_20415 PF01590 GAF domain B4599_20415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B4599_20420 PF04972 BON domain B4599_20425 PF02894 Oxidoreductase family, C-terminal alpha/beta domain B4599_20425 PF01408 Oxidoreductase family, NAD-binding Rossmann fold B4599_20430 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain B4599_20430 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase B4599_20465 PF01467 Cytidylyltransferase-like B4599_20465 PF00293 NUDIX domain B4599_20475 PF00595 PDZ domain B4599_20475 PF11818 C-terminal domain of tail specific protease (DUF3340) B4599_20475 PF03572 Peptidase family S41 B4599_20475 PF17804 Tail specific protease N-terminal domain B4599_20485 PF07669 Eco57I restriction-modification methylase B4599_20485 PF12950 TaqI-like C-terminal specificity domain B4599_20490 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family B4599_20490 PF04055 Radical SAM superfamily B4599_20495 PF03099 Biotin/lipoate A/B protein ligase family B4599_20500 PF04359 Protein of unknown function (DUF493) B4599_20510 PF07943 Penicillin-binding protein 5, C-terminal domain B4599_20510 PF00768 D-alanyl-D-alanine carboxypeptidase B4599_20520 PF03330 Lytic transglycolase B4599_20520 PF05036 Sporulation related domain B4599_20525 PF13406 Transglycosylase SLT domain B4599_20545 PF16671 Actin cross-linking domain B4599_20545 PF04717 Type VI secretion system, phage-baseplate injector B4599_20555 PF01098 Cell cycle protein B4599_20560 PF03717 Penicillin-binding Protein dimerisation domain B4599_20560 PF00905 Penicillin binding protein transpeptidase domain B4599_20570 PF04085 rod shape-determining protein MreC B4599_20580 PF00294 pfkB family carbohydrate kinase B4599_20585 PF05598 Transposase domain (DUF772) B4599_20585 PF01609 Transposase DDE domain B4599_20610 PF13673 Acetyltransferase (GNAT) domain B4599_20620 PF13533 Biotin-lipoyl like B4599_20630 PF01209 ubiE/COQ5 methyltransferase family B4599_20635 PF17152 Periplasmic sensor domain B4599_20635 PF00990 Diguanylate cyclase, GGDEF domain B4599_20640 PF11838 ERAP1-like C-terminal domain B4599_20640 PF01433 Peptidase family M1 domain B4599_20655 PF10431 C-terminal, D2-small domain, of ClpB protein B4599_20655 PF07724 AAA domain (Cdc48 subfamily) B4599_20655 PF00004 ATPase family associated with various cellular activities (AAA) B4599_20660 PF00227 Proteasome subunit B4599_20670 PF02899 Phage integrase, N-terminal SAM-like domain B4599_20670 PF00589 Phage integrase family B4599_20680 PF01678 Diaminopimelate epimerase B4599_20695 PF00326 Prolyl oligopeptidase family B4599_20695 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain B4599_20700 PF00155 Aminotransferase class I and II B4599_20715 PF00326 Prolyl oligopeptidase family B4599_20715 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain B4599_20740 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain B4599_20740 PF03900 Porphobilinogen deaminase, C-terminal domain B4599_20745 PF00072 Response regulator receiver domain B4599_20745 PF04397 LytTr DNA-binding domain B4599_20750 PF06580 Histidine kinase B4599_20750 PF07694 5TMR of 5TMR-LYT B4599_20760 PF13632 Glycosyl transferase family group 2 B4599_20775 PF13340 Putative transposase of IS4/5 family (DUF4096) B4599_20800 PF01740 STAS domain B4599_20800 PF00916 Sulfate permease family B4599_20805 PF00150 Cellulase (glycosyl hydrolase family 5) B4599_20805 PF00553 Cellulose binding domain B4599_20820 PF00990 Diguanylate cyclase, GGDEF domain B4599_20820 PF00563 EAL domain B4599_20820 PF03707 Bacterial signalling protein N terminal repeat B4599_20845 PF13340 Putative transposase of IS4/5 family (DUF4096) B4599_20865 PF01204 Trehalase B4599_20885 PF01544 CorA-like Mg2+ transporter protein B4599_20895 PF00324 Amino acid permease B4599_20905 PF00553 Cellulose binding domain B4599_20905 PF01341 Glycosyl hydrolases family 6 B4599_20905 PF00041 Fibronectin type III domain B4599_20910 PF03330 Lytic transglycolase B4599_20915 PF00892 EamA-like transporter family B4599_20935 PF07759 Protein of unknown function (DUF1615) B4599_20975 PF00106 short chain dehydrogenase B4599_20995 PF04715 Anthranilate synthase component I, N terminal region B4599_20995 PF00425 chorismate binding enzyme B4599_21000 PF00781 Diacylglycerol kinase catalytic domain B4599_21005 PF00583 Acetyltransferase (GNAT) family B4599_21010 PF00834 Ribulose-phosphate 3 epimerase family B4599_21015 PF05099 Tellurite resistance protein TerB B4599_21015 PF00226 DnaJ domain B4599_21020 PF01259 SAICAR synthetase B4599_21035 PF02868 Thermolysin metallopeptidase, alpha-helical domain B4599_21035 PF01483 Proprotein convertase P-domain B4599_21035 PF07504 Fungalysin/Thermolysin Propeptide Motif B4599_21035 PF01447 Thermolysin metallopeptidase, catalytic domain B4599_21045 PF02868 Thermolysin metallopeptidase, alpha-helical domain B4599_21045 PF01447 Thermolysin metallopeptidase, catalytic domain B4599_21045 PF03413 Peptidase propeptide and YPEB domain B4599_21045 PF07504 Fungalysin/Thermolysin Propeptide Motif B4599_21060 PF13244 Domain of unknown function (DUF4040) B4599_21060 PF00361 Proton-conducting membrane transporter B4599_21060 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter B4599_21060 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus B4599_21065 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L B4599_21070 PF00361 Proton-conducting membrane transporter B4599_21080 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) B4599_21085 PF03334 Na+/H+ antiporter subunit B4599_21095 PF04209 homogentisate 1,2-dioxygenase B4599_21100 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily B4599_21105 PF01047 MarR family B4599_21115 PF00854 POT family B4599_21120 PF03301 Tryptophan 2,3-dioxygenase B4599_21130 PF00676 Dehydrogenase E1 component B4599_21160 PF02803 Thiolase, C-terminal domain B4599_21160 PF00108 Thiolase, N-terminal domain B4599_21210 PF01609 Transposase DDE domain B4599_21210 PF05598 Transposase domain (DUF772) B4599_21240 PF01427 D-ala-D-ala dipeptidase B4599_21245 PF01510 N-acetylmuramoyl-L-alanine amidase B4599_21255 PF13378 Enolase C-terminal domain-like B4599_21255 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain B4599_21290 PF13340 Putative transposase of IS4/5 family (DUF4096) B4599_21300 PF13520 Amino acid permease B4599_21315 PF13340 Putative transposase of IS4/5 family (DUF4096) B4599_21335 PF05360 yiaA/B two helix domain B4599_21340 PF07995 Glucose / Sorbosone dehydrogenase B4599_21375 PF14310 Fibronectin type III-like domain B4599_21375 PF00933 Glycosyl hydrolase family 3 N terminal domain B4599_21375 PF01915 Glycosyl hydrolase family 3 C-terminal domain B4599_21380 PF02152 Dihydroneopterin aldolase B4599_21385 PF00814 Glycoprotease family B4599_21390 PF01165 Ribosomal protein S21 B4599_21395 PF09424 Yqey-like protein B4599_21405 PF03631 Virulence factor BrkB B4599_21410 PF01807 CHC2 zinc finger B4599_21410 PF08275 DNA primase catalytic core, N-terminal domain B4599_21410 PF08278 DNA primase DnaG DnaB-binding B4599_21410 PF10410 DnaB-helicase binding domain of primase B4599_21425 PF13593 SBF-like CPA transporter family (DUF4137) B4599_21440 PF01040 UbiA prenyltransferase family B4599_21465 PF00510 Cytochrome c oxidase subunit III B4599_21470 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 B4599_21475 PF00115 Cytochrome C and Quinol oxidase polypeptide I B4599_21480 PF00116 Cytochrome C oxidase subunit II, periplasmic domain B4599_21480 PF02790 Cytochrome C oxidase subunit II, transmembrane domain B4599_21490 PF01619 Proline dehydrogenase B4599_21490 PF18327 Proline utilization A proline dehydrogenase N-terminal domain B4599_21490 PF14850 DNA-binding domain of Proline dehydrogenase B4599_21490 PF00171 Aldehyde dehydrogenase family B4599_21505 PF00210 Ferritin-like domain B4599_21515 PF00293 NUDIX domain B4599_21530 PF00380 Ribosomal protein S9/S16 B4599_21535 PF00572 Ribosomal protein L13 B4599_21540 PF03232 Ubiquinone biosynthesis protein COQ7 B4599_21545 PF00893 Small Multidrug Resistance protein B4599_21550 PF02675 S-adenosylmethionine decarboxylase B4599_21555 PF00325 Bacterial regulatory proteins, crp family B4599_21555 PF00027 Cyclic nucleotide-binding domain B4599_21565 PF00218 Indole-3-glycerol phosphate synthase B4599_21570 PF02885 Glycosyl transferase family, helical bundle domain B4599_21570 PF00591 Glycosyl transferase family, a/b domain B4599_21585 PF00117 Glutamine amidotransferase class-I B4599_21610 PF03971 Monomeric isocitrate dehydrogenase B4599_21620 PF05598 Transposase domain (DUF772) B4599_21660 PF01609 Transposase DDE domain B4599_21660 PF05598 Transposase domain (DUF772) B4599_21670 PF00872 Transposase, Mutator family B4599_21680 PF14489 QueF-like protein B4599_21680 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term B4599_21690 PF07687 Peptidase dimerisation domain B4599_21690 PF01546 Peptidase family M20/M25/M40 B4599_21695 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion B4599_21700 PF00873 AcrB/AcrD/AcrF family B4599_21705 PF00873 AcrB/AcrD/AcrF family B4599_21715 PF07063 Domain of unknown function (DUF1338) B4599_21755 PF00581 Rhodanese-like domain B4599_21760 PF02556 Preprotein translocase subunit SecB B4599_21765 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus B4599_21765 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus B4599_21775 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain B4599_21775 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain B4599_21775 PF00205 Thiamine pyrophosphate enzyme, central domain B4599_21780 PF00512 His Kinase A (phospho-acceptor) domain B4599_21780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B4599_21785 PF02954 Bacterial regulatory protein, Fis family B4599_21785 PF00072 Response regulator receiver domain B4599_21785 PF00158 Sigma-54 interaction domain B4599_21800 PF07690 Major Facilitator Superfamily B4599_21805 PF00588 SpoU rRNA Methylase family B4599_21820 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal B4599_21820 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III B4599_21825 PF13784 Fic/DOC family N-terminal B4599_21825 PF02661 Fic/DOC family B4599_21830 PF01555 DNA methylase B4599_21840 PF00561 alpha/beta hydrolase fold B4599_21845 PF03692 Putative zinc- or iron-chelating domain B4599_21850 PF00501 AMP-binding enzyme B4599_21855 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family B4599_21870 PF05598 Transposase domain (DUF772) B4599_21885 PF01966 HD domain B4599_21885 PF11871 Domain of unknown function (DUF3391) B4599_21890 PF07690 Major Facilitator Superfamily B4599_21920 PF00132 Bacterial transferase hexapeptide (six repeats) B4599_21925 PF03692 Putative zinc- or iron-chelating domain B4599_21930 PF00920 Dehydratase family B4599_21935 PF13495 Phage integrase, N-terminal SAM-like domain B4599_21935 PF00589 Phage integrase family B4599_21960 PF01609 Transposase DDE domain B4599_21960 PF05598 Transposase domain (DUF772) B4599_21970 PF01218 Coproporphyrinogen III oxidase B4599_21985 PF00476 DNA polymerase family A B4599_21985 PF01367 5'-3' exonuclease, C-terminal SAM fold B4599_21985 PF01612 3'-5' exonuclease B4599_21985 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain B4599_22010 PF00456 Transketolase, thiamine diphosphate binding domain B4599_22010 PF17831 Pyruvate dehydrogenase E1 component middle domain B4599_22025 PF03377 TAL effector repeat B4599_22040 PF13276 HTH-like domain B4599_22040 PF13333 Integrase core domain B4599_22040 PF00665 Integrase core domain B4599_22045 PF01527 Transposase B4599_22075 PF04264 YceI-like domain B4599_22080 PF00881 Nitroreductase family B4599_22110 PF02592 Putative vitamin uptake transporter B4599_22115 PF08335 GlnD PII-uridylyltransferase B4599_22115 PF03710 Glutamate-ammonia ligase adenylyltransferase B4599_22125 PF08450 SMP-30/Gluconolactonase/LRE-like region B4599_22170 PF00793 DAHP synthetase I family B4599_22185 PF07715 TonB-dependent Receptor Plug Domain B4599_22185 PF00593 TonB dependent receptor B4599_22195 PF00118 TCP-1/cpn60 chaperonin family B4599_22200 PF00166 Chaperonin 10 Kd subunit B4599_22220 PF07992 Pyridine nucleotide-disulphide oxidoreductase B4599_22230 PF04545 Sigma-70, region 4 B4599_22230 PF04542 Sigma-70 region 2 B4599_22235 PF03167 Uracil DNA glycosylase superfamily B4599_22240 PF01339 CheB methylesterase B4599_22240 PF00072 Response regulator receiver domain B4599_22245 PF18075 FtsX extracellular domain B4599_22250 PF00005 ABC transporter B4599_22255 PF12300 ATP-dependent RNA helicase RhlB B4599_22255 PF00270 DEAD/DEAH box helicase B4599_22255 PF00271 Helicase conserved C-terminal domain B4599_22260 PF00085 Thioredoxin B4599_22265 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain B4599_22265 PF07498 Rho termination factor, N-terminal domain B4599_22265 PF07497 Rho termination factor, RNA-binding domain B4599_22275 PF01103 Surface antigen B4599_22275 PF17243 POTRA domain TamA domain 1 B4599_22280 PF04357 TamB, inner membrane protein subunit of TAM complex B4599_22315 PF07977 FabA-like domain B4599_22320 PF01553 Acyltransferase B4599_22330 PF00550 Phosphopantetheine attachment site B4599_22335 PF04820 Tryptophan halogenase B4599_22390 PF01638 HxlR-like helix-turn-helix B4599_22395 PF05368 NmrA-like family B4599_22410 PF03812 2-keto-3-deoxygluconate permease B4599_22415 PF01717 Cobalamin-independent synthase, Catalytic domain B4599_22415 PF08267 Cobalamin-independent synthase, N-terminal domain B4599_22425 PF03358 NADPH-dependent FMN reductase B4599_22430 PF03466 LysR substrate binding domain B4599_22430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B4599_22435 PF02677 Epoxyqueuosine reductase QueH B4599_22450 PF00672 HAMP domain B4599_22450 PF00512 His Kinase A (phospho-acceptor) domain B4599_22450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B4599_22455 PF00512 His Kinase A (phospho-acceptor) domain B4599_22455 PF00672 HAMP domain B4599_22455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B4599_22460 PF00072 Response regulator receiver domain B4599_22460 PF00486 Transcriptional regulatory protein, C terminal B4599_22465 PF00551 Formyl transferase B4599_22485 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase B4599_22485 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase B4599_22490 PF00724 NADH:flavin oxidoreductase / NADH oxidase family B4599_22495 PF02146 Sir2 family B4599_22505 PF07690 Major Facilitator Superfamily B4599_22510 PF03466 LysR substrate binding domain B4599_22510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B4599_22530 PF01026 TatD related DNase B4599_22565 PF13340 Putative transposase of IS4/5 family (DUF4096) B4599_22585 PF00266 Aminotransferase class-V B4599_22600 PF09349 OHCU decarboxylase B4599_22600 PF01014 Uricase B4599_22645 PF00326 Prolyl oligopeptidase family B4599_22650 PF00289 Biotin carboxylase, N-terminal domain B4599_22650 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain B4599_22650 PF00364 Biotin-requiring enzyme B4599_22650 PF02785 Biotin carboxylase C-terminal domain B4599_22655 PF01039 Carboxyl transferase domain B4599_22660 PF00441 Acyl-CoA dehydrogenase, C-terminal domain B4599_22660 PF02770 Acyl-CoA dehydrogenase, middle domain B4599_22660 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B4599_22715 PF07683 Cobalamin synthesis protein cobW C-terminal domain B4599_22715 PF02492 CobW/HypB/UreG, nucleotide-binding domain B4599_22735 PF03969 AFG1-like ATPase B4599_22750 PF07715 TonB-dependent Receptor Plug Domain B4599_22750 PF00593 TonB dependent receptor B4599_22755 PF13181 Tetratricopeptide repeat B4599_22760 PF05746 DALR anticodon binding domain B4599_22760 PF02092 Glycyl-tRNA synthetase beta subunit B4599_22765 PF02091 Glycyl-tRNA synthetase alpha subunit B4599_22770 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain B4599_22770 PF00437 Type II/IV secretion system protein B4599_22790 PF00117 Glutamine amidotransferase class-I B4599_22790 PF00958 GMP synthase C terminal domain B4599_22800 PF00902 Sec-independent protein translocase protein (TatC) B4599_22805 PF02416 mttA/Hcf106 family B4599_22810 PF02416 mttA/Hcf106 family B4599_22820 PF00762 Ferrochelatase B4599_22825 PF12697 Alpha/beta hydrolase family B4599_22850 PF04381 Putative exonuclease, RdgC B4599_22855 PF01171 PP-loop family B4599_22870 PF00356 Bacterial regulatory proteins, lacI family B4599_22875 PF03648 Glycosyl hydrolase family 67 N-terminus B4599_22875 PF07488 Glycosyl hydrolase family 67 middle domain B4599_22875 PF07477 Glycosyl hydrolase family 67 C-terminus B4599_22885 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain B4599_22885 PF13378 Enolase C-terminal domain-like B4599_22890 PF04616 Glycosyl hydrolases family 43 B4599_22890 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain B4599_22895 PF14310 Fibronectin type III-like domain B4599_22895 PF00933 Glycosyl hydrolase family 3 N terminal domain B4599_22895 PF01915 Glycosyl hydrolase family 3 C-terminal domain B4599_22895 PF07691 PA14 domain B4599_22900 PF08125 Mannitol dehydrogenase C-terminal domain B4599_22900 PF01232 Mannitol dehydrogenase Rossmann domain B4599_22920 PF02614 Glucuronate isomerase B4599_22925 PF00331 Glycosyl hydrolase family 10 B4599_22925 PF03422 Carbohydrate binding module (family 6) B4599_22925 PF00553 Cellulose binding domain B4599_22955 PF04616 Glycosyl hydrolases family 43 B4599_22985 PF13340 Putative transposase of IS4/5 family (DUF4096) B4599_22995 PF12792 CSS motif domain associated with EAL B4599_22995 PF00563 EAL domain B4599_23000 PF00487 Fatty acid desaturase B4599_23005 PF00970 Oxidoreductase FAD-binding domain B4599_23005 PF00175 Oxidoreductase NAD-binding domain B4599_23005 PF00111 2Fe-2S iron-sulfur cluster binding domain B4599_23010 PF00440 Bacterial regulatory proteins, tetR family B4599_23040 PF01047 MarR family B4599_23045 PF02566 OsmC-like protein B4599_23135 PF01381 Helix-turn-helix B4599_23140 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB B4599_23145 PF13538 UvrD-like helicase C-terminal domain B4599_23150 PF00580 UvrD/REP helicase N-terminal domain B4599_23150 PF13361 UvrD-like helicase C-terminal domain B4599_23150 PF12705 PD-(D/E)XK nuclease superfamily B4599_23155 PF17946 RecC C-terminal domain B4599_23195 PF00080 Copper/zinc superoxide dismutase (SODC) B4599_23200 PF00080 Copper/zinc superoxide dismutase (SODC) B4599_23205 PF02954 Bacterial regulatory protein, Fis family B4599_23205 PF00072 Response regulator receiver domain B4599_23205 PF00158 Sigma-54 interaction domain B4599_23210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B4599_23210 PF00989 PAS fold B4599_23210 PF00512 His Kinase A (phospho-acceptor) domain B4599_23215 PF00909 Ammonium Transporter Family B4599_23220 PF00543 Nitrogen regulatory protein P-II B4599_23225 PF03951 Glutamine synthetase, beta-Grasp domain B4599_23225 PF00120 Glutamine synthetase, catalytic domain B4599_23230 PF02673 Bacitracin resistance protein BacA B4599_23270 PF03061 Thioesterase superfamily B4599_23275 PF13091 PLD-like domain B4599_23290 PF10609 NUBPL iron-transfer P-loop NTPase B4599_23290 PF01883 Iron-sulfur cluster assembly protein B4599_23310 PF01381 Helix-turn-helix B4599_23315 PF13657 HipA N-terminal domain B4599_23315 PF07804 HipA-like C-terminal domain B4599_23320 PF10017 Histidine-specific methyltransferase, SAM-dependent B4599_23325 PF12867 DinB superfamily B4599_23325 PF03781 Sulfatase-modifying factor enzyme 1 B4599_23335 PF00528 Binding-protein-dependent transport system inner membrane component B4599_23340 PF00005 ABC transporter B4599_23340 PF00571 CBS domain B4599_23355 PF00005 ABC transporter B4599_23365 PF01734 Patatin-like phospholipase B4599_23380 PF01609 Transposase DDE domain B4599_23380 PF05598 Transposase domain (DUF772) B4599_23400 PF00248 Aldo/keto reductase family B4599_23405 PF00107 Zinc-binding dehydrogenase B4599_23405 PF16884 N-terminal domain of oxidoreductase B4599_23410 PF00248 Aldo/keto reductase family B4599_23420 PF00849 RNA pseudouridylate synthase B4599_23435 PF00271 Helicase conserved C-terminal domain B4599_23435 PF08482 ATP-dependent helicase C-terminal B4599_23435 PF00270 DEAD/DEAH box helicase B4599_23435 PF04408 Helicase associated domain (HA2) B4599_23440 PF07308 Protein of unknown function (DUF1456) B4599_23445 PF13378 Enolase C-terminal domain-like B4599_23445 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain B4599_23455 PF01557 Fumarylacetoacetate (FAA) hydrolase family B4599_23470 PF00248 Aldo/keto reductase family B4599_23480 PF04616 Glycosyl hydrolases family 43 B4599_23480 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain B4599_23505 PF00196 Bacterial regulatory proteins, luxR family B4599_23505 PF00072 Response regulator receiver domain B4599_23510 PF13193 AMP-binding enzyme C-terminal domain B4599_23510 PF00501 AMP-binding enzyme B4599_23510 PF16177 Acetyl-coenzyme A synthetase N-terminus B4599_23525 PF04341 Protein of unknown function, DUF485 B4599_23530 PF00474 Sodium:solute symporter family B4599_23545 PF03372 Endonuclease/Exonuclease/phosphatase family B4599_23555 PF04226 Transglycosylase associated protein B4599_23560 PF01648 4'-phosphopantetheinyl transferase superfamily B4599_23565 PF09423 PhoD-like phosphatase B4599_23565 PF16655 PhoD-like phosphatase, N-terminal domain B4599_23570 PF09423 PhoD-like phosphatase B4599_23570 PF16655 PhoD-like phosphatase, N-terminal domain B4599_23575 PF02527 rRNA small subunit methyltransferase G B4599_23590 PF00830 Ribosomal L28 family B4599_23595 PF00471 Ribosomal protein L33 B4599_23600 PF04909 Amidohydrolase B4599_23610 PF04909 Amidohydrolase B4599_23620 PF04303 PrpF protein B4599_23625 PF03737 Aldolase/RraA B4599_23630 PF03466 LysR substrate binding domain B4599_23630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B4599_23635 PF13091 PLD-like domain B4599_23635 PF13396 Phospholipase_D-nuclease N-terminal B4599_23650 PF13361 UvrD-like helicase C-terminal domain B4599_23650 PF00580 UvrD/REP helicase N-terminal domain B4599_23665 PF13520 Amino acid permease B4599_23675 PF02646 RmuC family B4599_23685 PF00255 Glutathione peroxidase B4599_23700 PF04055 Radical SAM superfamily B4599_23710 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) B4599_23725 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain B4599_23725 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain B4599_23735 PF13180 PDZ domain B4599_23735 PF03572 Peptidase family S41 B4599_23740 PF01551 Peptidase family M23 B4599_23750 PF04389 Peptidase family M28 B4599_23795 PF02463 RecF/RecN/SMC N terminal domain B4599_23800 PF01227 GTP cyclohydrolase I B4599_23825 PF00083 Sugar (and other) transporter B4599_23915 PF02595 Glycerate kinase family B4599_23920 PF07690 Major Facilitator Superfamily B4599_23935 PF17785 PUA-like domain B4599_23935 PF10672 S-adenosylmethionine-dependent methyltransferase B4599_23945 PF03741 Integral membrane protein TerC family B4599_23950 PF01694 Rhomboid family B4599_23955 PF03009 Glycerophosphoryl diester phosphodiesterase family B4599_23965 PF01569 PAP2 superfamily B4599_23970 PF01926 50S ribosome-binding GTPase B4599_23970 PF12631 MnmE helical domain B4599_23970 PF10396 GTP-binding protein TrmE N-terminus B4599_23975 PF01522 Polysaccharide deacetylase B4599_23980 PF02096 60Kd inner membrane protein B4599_23980 PF14849 YidC periplasmic domain B4599_23985 PF00825 Ribonuclease P B4599_23990 PF00468 Ribosomal protein L34