locus-tag class description ABM06_00005 PF11638 DnaA N-terminal domain ABM06_00005 PF08299 Bacterial dnaA protein helix-turn-helix ABM06_00005 PF00308 Bacterial dnaA protein ABM06_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain ABM06_00010 PF02767 DNA polymerase III beta subunit, central domain ABM06_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain ABM06_00015 PF02463 RecF/RecN/SMC N terminal domain ABM06_00020 PF00986 DNA gyrase B subunit, carboxyl terminus ABM06_00020 PF18053 DNA gyrase B subunit insert domain ABM06_00020 PF00204 DNA gyrase B ABM06_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABM06_00020 PF01751 Toprim domain ABM06_00030 PF01435 Peptidase family M48 ABM06_00040 PF03544 Gram-negative bacterial TonB protein C-terminal ABM06_00045 PF01618 MotA/TolQ/ExbB proton channel family ABM06_00050 PF02472 Biopolymer transport protein ExbD/TolR ABM06_00055 PF02472 Biopolymer transport protein ExbD/TolR ABM06_00060 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ABM06_00070 PF13396 Phospholipase_D-nuclease N-terminal ABM06_00070 PF13091 PLD-like domain ABM06_00080 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain ABM06_00085 PF00155 Aminotransferase class I and II ABM06_00090 PF00593 TonB dependent receptor ABM06_00090 PF07715 TonB-dependent Receptor Plug Domain ABM06_00105 PF01609 Transposase DDE domain ABM06_00105 PF05598 Transposase domain (DUF772) ABM06_00110 PF01070 FMN-dependent dehydrogenase ABM06_00115 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family ABM06_00130 PF12241 Trans-2-enoyl-CoA reductase catalytic region ABM06_00130 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase ABM06_00130 PF07055 Enoyl reductase FAD binding domain ABM06_00135 PF00294 pfkB family carbohydrate kinase ABM06_00150 PF01609 Transposase DDE domain ABM06_00150 PF05598 Transposase domain (DUF772) ABM06_00170 PF05598 Transposase domain (DUF772) ABM06_00180 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ABM06_00180 PF00364 Biotin-requiring enzyme ABM06_00200 PF01609 Transposase DDE domain ABM06_00200 PF05598 Transposase domain (DUF772) ABM06_00210 PF00271 Helicase conserved C-terminal domain ABM06_00210 PF00270 DEAD/DEAH box helicase ABM06_00220 PF06903 VirK protein ABM06_00290 PF03150 Di-haem cytochrome c peroxidase ABM06_00295 PF13460 NAD(P)H-binding ABM06_00300 PF00128 Alpha amylase, catalytic domain ABM06_00300 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ABM06_00310 PF00128 Alpha amylase, catalytic domain ABM06_00315 PF02446 4-alpha-glucanotransferase ABM06_00320 PF11941 Domain of unknown function (DUF3459) ABM06_00320 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ABM06_00320 PF00128 Alpha amylase, catalytic domain ABM06_00325 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ABM06_00325 PF02806 Alpha amylase, C-terminal all-beta domain ABM06_00325 PF00128 Alpha amylase, catalytic domain ABM06_00330 PF00534 Glycosyl transferases group 1 ABM06_00330 PF08323 Starch synthase catalytic domain ABM06_00335 PF00990 Diguanylate cyclase, GGDEF domain ABM06_00335 PF00072 Response regulator receiver domain ABM06_00345 PF05661 Protein of unknown function (DUF808) ABM06_00350 PF03109 ABC1 family ABM06_00360 PF13340 Putative transposase of IS4/5 family (DUF4096) ABM06_00370 PF00924 Mechanosensitive ion channel ABM06_00370 PF12795 Mechanosensitive ion channel porin domain ABM06_00370 PF12794 Mechanosensitive ion channel inner membrane domain 1 ABM06_00395 PF01464 Transglycosylase SLT domain ABM06_00410 PF01311 Bacterial export proteins, family 1 ABM06_00420 PF18269 T3SS EscN ATPase C-terminal domain ABM06_00420 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABM06_00420 PF02874 ATP synthase alpha/beta family, beta-barrel domain ABM06_00435 PF01514 Secretory protein of YscJ/FliF family ABM06_00450 PF01312 FlhB HrpN YscU SpaS Family ABM06_00455 PF00771 FHIPEP family ABM06_00470 PF00813 FliP family ABM06_00475 PF01313 Bacterial export proteins, family 3 ABM06_00520 PF05598 Transposase domain (DUF772) ABM06_00520 PF01609 Transposase DDE domain ABM06_00530 PF01609 Transposase DDE domain ABM06_00530 PF05598 Transposase domain (DUF772) ABM06_00535 PF05819 NolX protein ABM06_00560 PF00595 PDZ domain ABM06_00570 PF08521 Two-component sensor kinase N-terminal ABM06_00570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABM06_00570 PF00512 His Kinase A (phospho-acceptor) domain ABM06_00575 PF01370 NAD dependent epimerase/dehydratase family ABM06_00575 PF08338 Domain of unknown function (DUF1731) ABM06_00585 PF01609 Transposase DDE domain ABM06_00585 PF05598 Transposase domain (DUF772) ABM06_00610 PF13936 Helix-turn-helix domain ABM06_00610 PF00665 Integrase core domain ABM06_00625 PF00293 NUDIX domain ABM06_00625 PF13344 Haloacid dehalogenase-like hydrolase ABM06_00650 PF13533 Biotin-lipoyl like ABM06_00665 PF00005 ABC transporter ABM06_00680 PF13936 Helix-turn-helix domain ABM06_00680 PF00665 Integrase core domain ABM06_00690 PF08845 Toxin SymE, type I toxin-antitoxin system ABM06_00705 PF03006 Haemolysin-III related ABM06_00710 PF00271 Helicase conserved C-terminal domain ABM06_00710 PF09369 Domain of unknown function (DUF1998) ABM06_00710 PF00270 DEAD/DEAH box helicase ABM06_00765 PF04898 Glutamate synthase central domain ABM06_00765 PF00310 Glutamine amidotransferases class-II ABM06_00765 PF01645 Conserved region in glutamate synthase ABM06_00765 PF01493 GXGXG motif ABM06_00770 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ABM06_00770 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABM06_00790 PF13936 Helix-turn-helix domain ABM06_00790 PF00665 Integrase core domain ABM06_00805 PF05598 Transposase domain (DUF772) ABM06_00810 PF04962 KduI/IolB family ABM06_00815 PF04962 KduI/IolB family ABM06_00820 PF00356 Bacterial regulatory proteins, lacI family ABM06_00840 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ABM06_00840 PF02806 Alpha amylase, C-terminal all-beta domain ABM06_00840 PF00128 Alpha amylase, catalytic domain ABM06_00845 PF00128 Alpha amylase, catalytic domain ABM06_00845 PF16657 Maltogenic Amylase, C-terminal domain ABM06_00850 PF11896 Domain of unknown function (DUF3416) ABM06_00850 PF00128 Alpha amylase, catalytic domain ABM06_00855 PF13276 HTH-like domain ABM06_00855 PF13683 Integrase core domain ABM06_00870 PF00872 Transposase, Mutator family ABM06_00885 PF05598 Transposase domain (DUF772) ABM06_00900 PF01078 Magnesium chelatase, subunit ChlI ABM06_00900 PF13335 Magnesium chelatase, subunit ChlI C-terminal ABM06_00905 PF04380 Membrane fusogenic activity ABM06_00910 PF00543 Nitrogen regulatory protein P-II ABM06_00930 PF17284 Spermidine synthase tetramerisation domain ABM06_00935 PF17810 Arginine decarboxylase helical bundle domain ABM06_00935 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ABM06_00935 PF17944 Arginine decarboxylase C-terminal helical extension ABM06_00940 PF05598 Transposase domain (DUF772) ABM06_00945 PF16671 Actin cross-linking domain ABM06_00945 PF04717 Type VI secretion system, phage-baseplate injector ABM06_00980 PF01134 Glucose inhibited division protein A ABM06_00980 PF13932 GidA associated domain ABM06_00990 PF00291 Pyridoxal-phosphate dependent enzyme ABM06_01010 PF13649 Methyltransferase domain ABM06_01020 PF12697 Alpha/beta hydrolase family ABM06_01030 PF13683 Integrase core domain ABM06_01030 PF13276 HTH-like domain ABM06_01040 PF04349 Periplasmic glucan biosynthesis protein, MdoG ABM06_01050 PF00265 Thymidine kinase ABM06_01055 PF13361 UvrD-like helicase C-terminal domain ABM06_01055 PF00580 UvrD/REP helicase N-terminal domain ABM06_01065 PF04337 Protein of unknown function, DUF480 ABM06_01070 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) ABM06_01075 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ABM06_01080 PF04820 Tryptophan halogenase ABM06_01095 PF00356 Bacterial regulatory proteins, lacI family ABM06_01105 PF01553 Acyltransferase ABM06_01125 PF01527 Transposase ABM06_01140 PF00657 GDSL-like Lipase/Acylhydrolase ABM06_01150 PF00351 Biopterin-dependent aromatic amino acid hydroxylase ABM06_01155 PF01037 Lrp/AsnC ligand binding domain ABM06_01165 PF07660 Secretin and TonB N terminus short domain ABM06_01165 PF07715 TonB-dependent Receptor Plug Domain ABM06_01165 PF00593 TonB dependent receptor ABM06_01170 PF00593 TonB dependent receptor ABM06_01170 PF07715 TonB-dependent Receptor Plug Domain ABM06_01180 PF05598 Transposase domain (DUF772) ABM06_01210 PF08240 Alcohol dehydrogenase GroES-like domain ABM06_01210 PF00107 Zinc-binding dehydrogenase ABM06_01215 PF00150 Cellulase (glycosyl hydrolase family 5) ABM06_01220 PF00150 Cellulase (glycosyl hydrolase family 5) ABM06_01225 PF00150 Cellulase (glycosyl hydrolase family 5) ABM06_01235 PF02810 SEC-C motif ABM06_01245 PF05598 Transposase domain (DUF772) ABM06_01245 PF01609 Transposase DDE domain ABM06_01250 PF01263 Aldose 1-epimerase ABM06_01255 PF07690 Major Facilitator Superfamily ABM06_01260 PF01126 Heme oxygenase ABM06_01265 PF00360 Phytochrome region ABM06_01265 PF13426 PAS domain ABM06_01265 PF08446 PAS fold ABM06_01265 PF01590 GAF domain ABM06_01270 PF03594 Benzoate membrane transport protein ABM06_01275 PF03594 Benzoate membrane transport protein ABM06_01310 PF01527 Transposase ABM06_01320 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ABM06_01320 PF06827 Zinc finger found in FPG and IleRS ABM06_01320 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ABM06_01330 PF13340 Putative transposase of IS4/5 family (DUF4096) ABM06_01340 PF05598 Transposase domain (DUF772) ABM06_01350 PF04333 MlaA lipoprotein ABM06_01360 PF05494 MlaC protein ABM06_01365 PF02470 MlaD protein ABM06_01370 PF02405 Permease MlaE ABM06_01375 PF00005 ABC transporter ABM06_01405 PF13340 Putative transposase of IS4/5 family (DUF4096) ABM06_01435 PF13683 Integrase core domain ABM06_01435 PF13276 HTH-like domain ABM06_01440 PF01527 Transposase ABM06_01460 PF13570 PQQ-like domain ABM06_01460 PF13360 PQQ-like domain ABM06_01460 PF01011 PQQ enzyme repeat ABM06_01465 PF13340 Putative transposase of IS4/5 family (DUF4096) ABM06_01485 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain ABM06_01485 PF06165 Glycosyltransferase family 36 ABM06_01500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABM06_01500 PF00512 His Kinase A (phospho-acceptor) domain ABM06_01505 PF02659 Putative manganese efflux pump ABM06_01510 PF09339 IclR helix-turn-helix domain ABM06_01510 PF01614 Bacterial transcriptional regulator ABM06_01515 PF07690 Major Facilitator Superfamily ABM06_01520 PF05336 L-rhamnose mutarotase ABM06_01545 PF01432 Peptidase family M3 ABM06_01560 PF00472 RF-1 domain ABM06_01570 PF00849 RNA pseudouridylate synthase ABM06_01580 PF03109 ABC1 family ABM06_01625 PF13340 Putative transposase of IS4/5 family (DUF4096) ABM06_01630 PF01527 Transposase ABM06_01670 PF02558 Ketopantoate reductase PanE/ApbA ABM06_01670 PF08546 Ketopantoate reductase PanE/ApbA C terminal ABM06_01680 PF01061 ABC-2 type transporter ABM06_01685 PF00005 ABC transporter ABM06_01690 PF01383 CpcD/allophycocyanin linker domain ABM06_01690 PF00175 Oxidoreductase NAD-binding domain ABM06_01695 PF01545 Cation efflux family ABM06_01700 PF02583 Metal-sensitive transcriptional repressor ABM06_01710 PF01381 Helix-turn-helix ABM06_01720 PF00005 ABC transporter ABM06_01735 PF04820 Tryptophan halogenase ABM06_01755 PF13340 Putative transposase of IS4/5 family (DUF4096) ABM06_01765 PF02798 Glutathione S-transferase, N-terminal domain ABM06_01765 PF00043 Glutathione S-transferase, C-terminal domain ABM06_01770 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region ABM06_01770 PF00326 Prolyl oligopeptidase family ABM06_01790 PF00490 Delta-aminolevulinic acid dehydratase ABM06_01800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABM06_01800 PF03466 LysR substrate binding domain ABM06_01810 PF00667 FAD binding domain ABM06_01810 PF00258 Flavodoxin ABM06_01810 PF00175 Oxidoreductase NAD-binding domain ABM06_01820 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ABM06_01820 PF08501 Shikimate dehydrogenase substrate binding domain ABM06_01820 PF01488 Shikimate / quinate 5-dehydrogenase ABM06_01830 PF13307 Helicase C-terminal domain ABM06_01830 PF06733 DEAD_2 ABM06_01835 PF13340 Putative transposase of IS4/5 family (DUF4096) ABM06_01860 PF13533 Biotin-lipoyl like ABM06_01865 PF06628 Catalase-related immune-responsive ABM06_01865 PF00199 Catalase ABM06_01885 PF01207 Dihydrouridine synthase (Dus) ABM06_01895 PF00072 Response regulator receiver domain ABM06_01895 PF00486 Transcriptional regulatory protein, C terminal ABM06_01900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABM06_01900 PF00512 His Kinase A (phospho-acceptor) domain ABM06_01900 PF00672 HAMP domain ABM06_01915 PF06167 Glucose-regulated metallo-peptidase M90 ABM06_01925 PF03099 Biotin/lipoate A/B protein ligase family ABM06_01925 PF08279 HTH domain ABM06_01925 PF02237 Biotin protein ligase C terminal domain ABM06_01930 PF03309 Type III pantothenate kinase ABM06_01945 PF02223 Thymidylate kinase ABM06_01965 PF00491 Arginase family ABM06_01980 PF05532 CsbD-like ABM06_01985 PF00579 tRNA synthetases class I (W and Y) ABM06_01990 PF00753 Metallo-beta-lactamase superfamily ABM06_02015 PF00892 EamA-like transporter family ABM06_02035 PF00199 Catalase ABM06_02040 PF08281 Sigma-70, region 4 ABM06_02040 PF04542 Sigma-70 region 2 ABM06_02050 PF00883 Cytosol aminopeptidase family, catalytic domain ABM06_02050 PF02789 Cytosol aminopeptidase family, N-terminal domain ABM06_02060 PF01594 AI-2E family transporter ABM06_02070 PF01040 UbiA prenyltransferase family ABM06_02080 PF06968 Biotin and Thiamin Synthesis associated domain ABM06_02080 PF04055 Radical SAM superfamily ABM06_02085 PF00155 Aminotransferase class I and II ABM06_02105 PF05598 Transposase domain (DUF772) ABM06_02105 PF01609 Transposase DDE domain ABM06_02115 PF00535 Glycosyl transferase family 2 ABM06_02125 PF02801 Beta-ketoacyl synthase, C-terminal domain ABM06_02125 PF00109 Beta-ketoacyl synthase, N-terminal domain ABM06_02130 PF05166 YcgL domain ABM06_02145 PF00723 Glycosyl hydrolases family 15 ABM06_02150 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ABM06_02150 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ABM06_02160 PF00999 Sodium/hydrogen exchanger family ABM06_02160 PF02254 TrkA-N domain ABM06_02165 PF01769 Divalent cation transporter ABM06_02165 PF00571 CBS domain ABM06_02165 PF03448 MgtE intracellular N domain ABM06_02175 PF00583 Acetyltransferase (GNAT) family ABM06_02175 PF13380 CoA binding domain ABM06_02175 PF13607 Succinyl-CoA ligase like flavodoxin domain ABM06_02185 PF00317 Ribonucleotide reductase, all-alpha domain ABM06_02185 PF02867 Ribonucleotide reductase, barrel domain ABM06_02185 PF03477 ATP cone domain ABM06_02190 PF00268 Ribonucleotide reductase, small chain ABM06_02210 PF01527 Transposase ABM06_02215 PF13276 HTH-like domain ABM06_02215 PF13683 Integrase core domain ABM06_02225 PF00108 Thiolase, N-terminal domain ABM06_02225 PF02803 Thiolase, C-terminal domain ABM06_02230 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal ABM06_02230 PF00775 Dioxygenase ABM06_02240 PF10397 Adenylosuccinate lyase C-terminus ABM06_02240 PF00206 Lyase ABM06_02245 PF12146 Serine aminopeptidase, S33 ABM06_02250 PF02627 Carboxymuconolactone decarboxylase family ABM06_02260 PF09339 IclR helix-turn-helix domain ABM06_02260 PF01614 Bacterial transcriptional regulator ABM06_02270 PF13936 Helix-turn-helix domain ABM06_02270 PF00665 Integrase core domain ABM06_02275 PF00106 short chain dehydrogenase ABM06_02290 PF00750 tRNA synthetases class I (R) ABM06_02290 PF05746 DALR anticodon binding domain ABM06_02290 PF03485 Arginyl tRNA synthetase N terminal domain ABM06_02295 PF04002 RadC-like JAB domain ABM06_02300 PF04127 DNA / pantothenate metabolism flavoprotein ABM06_02300 PF02441 Flavoprotein ABM06_02305 PF00692 dUTPase ABM06_02310 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ABM06_02310 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ABM06_02310 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ABM06_02310 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ABM06_02325 PF00535 Glycosyl transferase family 2 ABM06_02330 PF01370 NAD dependent epimerase/dehydratase family ABM06_02340 PF02195 ParB-like nuclease domain ABM06_02340 PF17762 HTH domain found in ParB protein ABM06_02345 PF13614 AAA domain ABM06_02355 PF00156 Phosphoribosyl transferase domain ABM06_02360 PF03372 Endonuclease/Exonuclease/phosphatase family ABM06_02365 PF07690 Major Facilitator Superfamily ABM06_02375 PF03702 Anhydro-N-acetylmuramic acid kinase ABM06_02380 PF01551 Peptidase family M23 ABM06_02380 PF04225 Opacity-associated protein A LysM-like domain ABM06_02385 PF00579 tRNA synthetases class I (W and Y) ABM06_02420 PF01527 Transposase ABM06_02425 PF00672 HAMP domain ABM06_02425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABM06_02425 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ABM06_02425 PF00072 Response regulator receiver domain ABM06_02425 PF00512 His Kinase A (phospho-acceptor) domain ABM06_02425 PF01627 Hpt domain ABM06_02430 PF00072 Response regulator receiver domain ABM06_02430 PF00486 Transcriptional regulatory protein, C terminal ABM06_02455 PF01521 Iron-sulphur cluster biosynthesis ABM06_02465 PF09297 NADH pyrophosphatase zinc ribbon domain ABM06_02465 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain ABM06_02465 PF00293 NUDIX domain ABM06_02470 PF17113 Regulatory signalling modulator protein AmpE ABM06_02470 PF03186 CobD/Cbib protein ABM06_02490 PF07690 Major Facilitator Superfamily ABM06_02505 PF12805 FUSC-like inner membrane protein yccS ABM06_02515 PF00005 ABC transporter ABM06_02515 PF02687 FtsX-like permease family ABM06_02515 PF12704 MacB-like periplasmic core domain ABM06_02520 PF01609 Transposase DDE domain ABM06_02520 PF05598 Transposase domain (DUF772) ABM06_02525 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ABM06_02525 PF02843 Phosphoribosylglycinamide synthetase, C domain ABM06_02525 PF02844 Phosphoribosylglycinamide synthetase, N domain ABM06_02535 PF02142 MGS-like domain ABM06_02535 PF01808 AICARFT/IMPCHase bienzyme ABM06_02545 PF12147 Putative methyltransferase ABM06_02545 PF12146 Serine aminopeptidase, S33 ABM06_02555 PF12147 Putative methyltransferase ABM06_02555 PF12146 Serine aminopeptidase, S33 ABM06_02560 PF00782 Dual specificity phosphatase, catalytic domain ABM06_02570 PF02954 Bacterial regulatory protein, Fis family ABM06_02580 PF01381 Helix-turn-helix ABM06_02605 PF02785 Biotin carboxylase C-terminal domain ABM06_02605 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABM06_02605 PF00289 Biotin carboxylase, N-terminal domain ABM06_02615 PF00364 Biotin-requiring enzyme ABM06_02620 PF01220 Dehydroquinase class II ABM06_02630 PF11412 Disulphide bond corrector protein DsbC ABM06_02630 PF02683 Cytochrome C biogenesis protein transmembrane region ABM06_02635 PF03091 CutA1 divalent ion tolerance protein ABM06_02640 PF18074 Primosomal protein N C-terminal domain ABM06_02640 PF00271 Helicase conserved C-terminal domain ABM06_02640 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ABM06_02640 PF00270 DEAD/DEAH box helicase ABM06_02640 PF17764 3′ DNA-binding domain (3′BD) ABM06_02660 PF01554 MatE ABM06_02665 PF01343 Peptidase family S49 ABM06_02690 PF01300 Telomere recombination ABM06_02695 PF01751 Toprim domain ABM06_02695 PF01131 DNA topoisomerase ABM06_02695 PF13368 Topoisomerase C-terminal repeat ABM06_02705 PF00114 Pilin (bacterial filament) ABM06_02705 PF07963 Prokaryotic N-terminal methylation motif ABM06_02710 PF04361 Protein of unknown function (DUF494) ABM06_02715 PF17782 DprA winged helix domain ABM06_02715 PF02481 DNA recombination-mediator protein A ABM06_02720 PF01476 LysM domain ABM06_02725 PF01327 Polypeptide deformylase ABM06_02730 PF00551 Formyl transferase ABM06_02730 PF02911 Formyl transferase, C-terminal domain ABM06_02735 PF01029 NusB family ABM06_02735 PF01189 16S rRNA methyltransferase RsmB/F ABM06_02750 PF00535 Glycosyl transferase family 2 ABM06_02770 PF00925 GTP cyclohydrolase II ABM06_02780 PF03279 Bacterial lipid A biosynthesis acyltransferase ABM06_02785 PF02580 D-Tyr-tRNA(Tyr) deacylase ABM06_02790 PF04545 Sigma-70, region 4 ABM06_02790 PF04542 Sigma-70 region 2 ABM06_02790 PF00140 Sigma-70 factor, region 1.2 ABM06_02790 PF03979 Sigma-70 factor, region 1.1 ABM06_02790 PF04546 Sigma-70, non-essential region ABM06_02790 PF04539 Sigma-70 region 3 ABM06_02830 PF01527 Transposase ABM06_02870 PF00005 ABC transporter ABM06_02885 PF07715 TonB-dependent Receptor Plug Domain ABM06_02885 PF00593 TonB dependent receptor ABM06_02935 PF02322 Cytochrome bd terminal oxidase subunit II ABM06_02940 PF01654 Cytochrome bd terminal oxidase subunit I ABM06_02945 PF00158 Sigma-54 interaction domain ABM06_02945 PF02954 Bacterial regulatory protein, Fis family ABM06_02945 PF00072 Response regulator receiver domain ABM06_02960 PF03705 CheR methyltransferase, all-alpha domain ABM06_02960 PF01739 CheR methyltransferase, SAM binding domain ABM06_02960 PF01339 CheB methylesterase ABM06_02960 PF08448 PAS fold ABM06_02975 PF00672 HAMP domain ABM06_02975 PF02743 Cache domain ABM06_02975 PF06580 Histidine kinase ABM06_02975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABM06_02980 PF04397 LytTr DNA-binding domain ABM06_02980 PF00072 Response regulator receiver domain ABM06_02985 PF04397 LytTr DNA-binding domain ABM06_02985 PF00072 Response regulator receiver domain ABM06_02995 PF13520 Amino acid permease ABM06_03010 PF05649 Peptidase family M13 ABM06_03010 PF01431 Peptidase family M13 ABM06_03025 PF00248 Aldo/keto reductase family ABM06_03040 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ABM06_03050 PF03167 Uracil DNA glycosylase superfamily ABM06_03055 PF02469 Fasciclin domain ABM06_03070 PF00999 Sodium/hydrogen exchanger family ABM06_03075 PF00005 ABC transporter ABM06_03080 PF01061 ABC-2 type transporter ABM06_03100 PF00082 Subtilase family ABM06_03100 PF04151 Bacterial pre-peptidase C-terminal domain ABM06_03110 PF08448 PAS fold ABM06_03110 PF13188 PAS domain ABM06_03110 PF00512 His Kinase A (phospho-acceptor) domain ABM06_03110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABM06_03110 PF00072 Response regulator receiver domain ABM06_03115 PF00072 Response regulator receiver domain ABM06_03115 PF00486 Transcriptional regulatory protein, C terminal ABM06_03135 PF13677 Membrane MotB of proton-channel complex MotA/MotB ABM06_03135 PF00691 OmpA family ABM06_03140 PF01618 MotA/TolQ/ExbB proton channel family ABM06_03150 PF01641 SelR domain ABM06_03160 PF01037 Lrp/AsnC ligand binding domain ABM06_03165 PF01266 FAD dependent oxidoreductase ABM06_03170 PF01168 Alanine racemase, N-terminal domain ABM06_03170 PF00842 Alanine racemase, C-terminal domain ABM06_03190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABM06_03190 PF00512 His Kinase A (phospho-acceptor) domain ABM06_03190 PF00989 PAS fold ABM06_03200 PF07995 Glucose / Sorbosone dehydrogenase ABM06_03215 PF08468 Methyltransferase small domain N-terminal ABM06_03215 PF05175 Methyltransferase small domain ABM06_03220 PF01479 S4 domain ABM06_03220 PF00849 RNA pseudouridylate synthase ABM06_03225 PF13419 Haloacid dehalogenase-like hydrolase ABM06_03255 PF04461 Protein of unknown function (DUF520) ABM06_03260 PF00892 EamA-like transporter family ABM06_03270 PF00528 Binding-protein-dependent transport system inner membrane component ABM06_03275 PF03180 NLPA lipoprotein ABM06_03300 PF02817 e3 binding domain ABM06_03300 PF00364 Biotin-requiring enzyme ABM06_03300 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ABM06_03310 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABM06_03310 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABM06_03330 PF00119 ATP synthase A chain ABM06_03335 PF00137 ATP synthase subunit C ABM06_03340 PF00430 ATP synthase B/B' CF(0) ABM06_03345 PF00213 ATP synthase delta (OSCP) subunit ABM06_03350 PF02874 ATP synthase alpha/beta family, beta-barrel domain ABM06_03350 PF00306 ATP synthase alpha/beta chain, C terminal domain ABM06_03350 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABM06_03355 PF00231 ATP synthase ABM06_03360 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABM06_03360 PF02874 ATP synthase alpha/beta family, beta-barrel domain ABM06_03365 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ABM06_03370 PF01817 Chorismate mutase type II ABM06_03380 PF00132 Bacterial transferase hexapeptide (six repeats) ABM06_03380 PF14602 Hexapeptide repeat of succinyl-transferase ABM06_03380 PF12804 MobA-like NTP transferase domain ABM06_03385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABM06_03385 PF13426 PAS domain ABM06_03385 PF00512 His Kinase A (phospho-acceptor) domain ABM06_03385 PF00672 HAMP domain ABM06_03415 PF08402 TOBE domain ABM06_03415 PF00005 ABC transporter ABM06_03420 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABM06_03425 PF01380 SIS domain ABM06_03440 PF13340 Putative transposase of IS4/5 family (DUF4096) ABM06_03455 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABM06_03460 PF05275 Copper resistance protein B precursor (CopB) ABM06_03465 PF07731 Multicopper oxidase ABM06_03465 PF00394 Multicopper oxidase ABM06_03465 PF07732 Multicopper oxidase ABM06_03480 PF01432 Peptidase family M3 ABM06_03490 PF00109 Beta-ketoacyl synthase, N-terminal domain ABM06_03490 PF02801 Beta-ketoacyl synthase, C-terminal domain ABM06_03495 PF07977 FabA-like domain ABM06_03500 PF00817 impB/mucB/samB family ABM06_03500 PF11799 impB/mucB/samB family C-terminal domain ABM06_03505 PF13419 Haloacid dehalogenase-like hydrolase ABM06_03515 PF13185 GAF domain ABM06_03530 PF01242 6-pyruvoyl tetrahydropterin synthase ABM06_03540 PF00271 Helicase conserved C-terminal domain ABM06_03540 PF00270 DEAD/DEAH box helicase ABM06_03550 PF02798 Glutathione S-transferase, N-terminal domain ABM06_03550 PF14497 Glutathione S-transferase, C-terminal domain ABM06_03555 PF00437 Type II/IV secretion system protein ABM06_03575 PF00571 CBS domain ABM06_03575 PF00291 Pyridoxal-phosphate dependent enzyme ABM06_03580 PF01053 Cys/Met metabolism PLP-dependent enzyme ABM06_03590 PF01370 NAD dependent epimerase/dehydratase family ABM06_03620 PF00872 Transposase, Mutator family ABM06_03630 PF00005 ABC transporter ABM06_03640 PF00766 Electron transfer flavoprotein FAD-binding domain ABM06_03640 PF01012 Electron transfer flavoprotein domain ABM06_03645 PF01012 Electron transfer flavoprotein domain ABM06_03650 PF16363 GDP-mannose 4,6 dehydratase ABM06_03655 PF00483 Nucleotidyl transferase ABM06_03660 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase ABM06_03665 PF04321 RmlD substrate binding domain ABM06_03670 PF00483 Nucleotidyl transferase ABM06_03670 PF01050 Mannose-6-phosphate isomerase ABM06_03675 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ABM06_03675 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ABM06_03675 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ABM06_03675 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ABM06_03680 PF01144 Coenzyme A transferase ABM06_03685 PF01144 Coenzyme A transferase ABM06_03690 PF14307 Glycosyltransferase WbsX ABM06_03690 PF05045 Rhamnan synthesis protein F ABM06_03710 PF03886 ABC-type transport auxiliary lipoprotein component ABM06_03710 PF02470 MlaD protein ABM06_03715 PF00005 ABC transporter ABM06_03720 PF02405 Permease MlaE ABM06_03730 PF00816 H-NS histone family ABM06_03735 PF03129 Anticodon binding domain ABM06_03735 PF04073 Aminoacyl-tRNA editing domain ABM06_03735 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABM06_03745 PF01066 CDP-alcohol phosphatidyltransferase ABM06_03770 PF05598 Transposase domain (DUF772) ABM06_03770 PF01609 Transposase DDE domain ABM06_03780 PF01464 Transglycosylase SLT domain ABM06_03780 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain ABM06_03785 PF00544 Pectate lyase ABM06_03810 PF13683 Integrase core domain ABM06_03810 PF13276 HTH-like domain ABM06_03815 PF01527 Transposase ABM06_03825 PF08264 Anticodon-binding domain of tRNA ABM06_03825 PF00133 tRNA synthetases class I (I, L, M and V) ABM06_03825 PF10458 Valyl tRNA synthetase tRNA binding arm ABM06_03840 PF02789 Cytosol aminopeptidase family, N-terminal domain ABM06_03840 PF00883 Cytosol aminopeptidase family, catalytic domain ABM06_03850 PF03739 Lipopolysaccharide export system permease LptF/LptG ABM06_03860 PF02899 Phage integrase, N-terminal SAM-like domain ABM06_03860 PF00589 Phage integrase family ABM06_03865 PF13098 Thioredoxin-like domain ABM06_03865 PF10411 Disulfide bond isomerase protein N-terminus ABM06_03870 PF02769 AIR synthase related protein, C-terminal domain ABM06_03870 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal ABM06_03870 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ABM06_03875 PF05658 Head domain of trimeric autotransporter adhesin ABM06_03875 PF05662 Coiled stalk of trimeric autotransporter adhesin ABM06_03875 PF13018 Extended Signal Peptide of Type V secretion system ABM06_03875 PF03895 YadA-like membrane anchor domain ABM06_03895 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ABM06_03895 PF00437 Type II/IV secretion system protein ABM06_03905 PF00482 Type II secretion system (T2SS), protein F ABM06_03910 PF08334 Type II secretion system (T2SS), protein G ABM06_03915 PF12019 Type II transport protein GspH ABM06_03920 PF07963 Prokaryotic N-terminal methylation motif ABM06_03930 PF03934 Type II secretion system (T2SS), protein K ABM06_03935 PF05137 Fimbrial assembly protein (PilN) ABM06_03940 PF10741 Type II secretion system (T2SS), protein M subtype b ABM06_03950 PF00263 Bacterial type II and III secretion system protein ABM06_03950 PF03958 Bacterial type II/III secretion system short domain ABM06_03960 PF00392 Bacterial regulatory proteins, gntR family ABM06_03960 PF07702 UTRA domain ABM06_03970 PF00593 TonB dependent receptor ABM06_03970 PF07715 TonB-dependent Receptor Plug Domain ABM06_03995 PF09827 CRISPR associated protein Cas2 ABM06_04000 PF01867 CRISPR associated protein Cas1 ABM06_04020 PF09704 CRISPR-associated protein (Cas_Cas5) ABM06_04035 PF02545 Maf-like protein ABM06_04040 PF02620 Large ribosomal RNA subunit accumulation protein YceD ABM06_04045 PF01783 Ribosomal L32p protein family ABM06_04050 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ABM06_04050 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ABM06_04060 PF00698 Acyl transferase domain ABM06_04070 PF00550 Phosphopantetheine attachment site ABM06_04075 PF00109 Beta-ketoacyl synthase, N-terminal domain ABM06_04075 PF02801 Beta-ketoacyl synthase, C-terminal domain ABM06_04080 PF04715 Anthranilate synthase component I, N terminal region ABM06_04080 PF00425 chorismate binding enzyme ABM06_04085 PF02618 YceG-like family ABM06_04090 PF09115 DNA polymerase III, delta subunit, C terminal ABM06_04125 PF02954 Bacterial regulatory protein, Fis family ABM06_04125 PF00158 Sigma-54 interaction domain ABM06_04125 PF06506 Propionate catabolism activator ABM06_04135 PF00285 Citrate synthase, C-terminal domain ABM06_04140 PF00330 Aconitase family (aconitate hydratase) ABM06_04140 PF00694 Aconitase C-terminal domain ABM06_04145 PF04303 PrpF protein ABM06_04150 PF05598 Transposase domain (DUF772) ABM06_04150 PF01609 Transposase DDE domain ABM06_04155 PF07715 TonB-dependent Receptor Plug Domain ABM06_04155 PF00593 TonB dependent receptor ABM06_04190 PF00665 Integrase core domain ABM06_04190 PF13936 Helix-turn-helix domain ABM06_04200 PF08534 Redoxin ABM06_04210 PF00226 DnaJ domain ABM06_04210 PF01556 DnaJ C terminal domain ABM06_04215 PF00072 Response regulator receiver domain ABM06_04220 PF01145 SPFH domain / Band 7 family ABM06_04220 PF12221 Bacterial membrane protein N terminal ABM06_04225 PF01145 SPFH domain / Band 7 family ABM06_04235 PF00709 Adenylosuccinate synthetase ABM06_04240 PF01433 Peptidase family M1 domain ABM06_04240 PF11838 ERAP1-like C-terminal domain ABM06_04280 PF03279 Bacterial lipid A biosynthesis acyltransferase ABM06_04285 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ABM06_04290 PF02321 Outer membrane efflux protein ABM06_04320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABM06_04325 PF00330 Aconitase family (aconitate hydratase) ABM06_04330 PF00694 Aconitase C-terminal domain ABM06_04340 PF00180 Isocitrate/isopropylmalate dehydrogenase ABM06_04345 PF08502 LeuA allosteric (dimerisation) domain ABM06_04345 PF00682 HMGL-like ABM06_04350 PF00291 Pyridoxal-phosphate dependent enzyme ABM06_04360 PF00205 Thiamine pyrophosphate enzyme, central domain ABM06_04360 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABM06_04360 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABM06_04365 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ABM06_04365 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ABM06_04370 PF01964 Radical SAM ThiC family ABM06_04370 PF13667 ThiC-associated domain ABM06_04375 PF18500 CadC C-terminal domain 1 ABM06_04375 PF00486 Transcriptional regulatory protein, C terminal ABM06_04380 PF12833 Helix-turn-helix domain ABM06_04385 PF00593 TonB dependent receptor ABM06_04385 PF07715 TonB-dependent Receptor Plug Domain ABM06_04395 PF00719 Inorganic pyrophosphatase ABM06_04430 PF00365 Phosphofructokinase ABM06_04440 PF02875 Mur ligase family, glutamate ligase domain ABM06_04440 PF01225 Mur ligase family, catalytic domain ABM06_04440 PF08245 Mur ligase middle domain ABM06_04450 PF01062 Bestrophin, RFP-TM, chloride channel ABM06_04465 PF02798 Glutathione S-transferase, N-terminal domain ABM06_04465 PF00043 Glutathione S-transferase, C-terminal domain ABM06_04470 PF00056 lactate/malate dehydrogenase, NAD binding domain ABM06_04470 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ABM06_04475 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ABM06_04500 PF01474 Class-II DAHP synthetase family ABM06_04510 PF02600 Disulfide bond formation protein DsbB ABM06_04520 PF01527 Transposase ABM06_04525 PF13276 HTH-like domain ABM06_04525 PF13683 Integrase core domain ABM06_04570 PF00665 Integrase core domain ABM06_04570 PF13936 Helix-turn-helix domain ABM06_04600 PF01527 Transposase ABM06_04630 PF13340 Putative transposase of IS4/5 family (DUF4096) ABM06_04650 PF05598 Transposase domain (DUF772) ABM06_04650 PF01609 Transposase DDE domain ABM06_04670 PF13340 Putative transposase of IS4/5 family (DUF4096) ABM06_04675 PF03009 Glycerophosphoryl diester phosphodiesterase family ABM06_04705 PF18324 Hypothetical protein TT1725 ABM06_04705 PF00180 Isocitrate/isopropylmalate dehydrogenase ABM06_04735 PF01527 Transposase ABM06_04760 PF05698 Bacterial trigger factor protein (TF) C-terminus ABM06_04760 PF05697 Bacterial trigger factor protein (TF) ABM06_04765 PF00574 Clp protease ABM06_04770 PF07724 AAA domain (Cdc48 subfamily) ABM06_04770 PF10431 C-terminal, D2-small domain, of ClpB protein ABM06_04770 PF06689 ClpX C4-type zinc finger ABM06_04775 PF02190 ATP-dependent protease La (LON) substrate-binding domain ABM06_04775 PF05362 Lon protease (S16) C-terminal proteolytic domain ABM06_04775 PF00004 ATPase family associated with various cellular activities (AAA) ABM06_04780 PF00216 Bacterial DNA-binding protein ABM06_04805 PF05257 CHAP domain ABM06_04805 PF01476 LysM domain ABM06_04810 PF00753 Metallo-beta-lactamase superfamily ABM06_04810 PF16123 Hydroxyacylglutathione hydrolase C-terminus ABM06_04820 PF00075 RNase H ABM06_04825 PF00929 Exonuclease ABM06_04855 PF04717 Type VI secretion system, phage-baseplate injector ABM06_04855 PF16671 Actin cross-linking domain ABM06_04900 PF00589 Phage integrase family ABM06_04900 PF13356 Arm DNA-binding domain ABM06_04910 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ABM06_04920 PF00753 Metallo-beta-lactamase superfamily ABM06_04920 PF12706 Beta-lactamase superfamily domain ABM06_04925 PF04055 Radical SAM superfamily ABM06_04925 PF06463 Molybdenum Cofactor Synthesis C ABM06_04935 PF01967 MoaC family ABM06_04940 PF02597 ThiS family ABM06_04945 PF02391 MoaE protein ABM06_04955 PF12170 DNA polymerase III tau subunit V interacting with alpha ABM06_04955 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding ABM06_04955 PF12169 DNA polymerase III subunits gamma and tau domain III ABM06_04960 PF02575 YbaB/EbfC DNA-binding family ABM06_04965 PF13662 Toprim domain ABM06_04965 PF02132 RecR protein ABM06_04970 PF01230 HIT domain ABM06_04980 PF01841 Transglutaminase-like superfamily ABM06_04980 PF13559 Domain of unknown function (DUF4129) ABM06_04980 PF11992 Domain of unknown function (DUF3488) ABM06_04990 PF17863 AAA lid domain ABM06_04990 PF07726 ATPase family associated with various cellular activities (AAA) ABM06_05010 PF01327 Polypeptide deformylase ABM06_05045 PF05598 Transposase domain (DUF772) ABM06_05045 PF01609 Transposase DDE domain ABM06_05065 PF00462 Glutaredoxin ABM06_05070 PF01522 Polysaccharide deacetylase ABM06_05090 PF03193 RsgA GTPase ABM06_05105 PF00128 Alpha amylase, catalytic domain ABM06_05120 PF00356 Bacterial regulatory proteins, lacI family ABM06_05125 PF00106 short chain dehydrogenase ABM06_05130 PF03600 Citrate transporter ABM06_05140 PF00072 Response regulator receiver domain ABM06_05140 PF00486 Transcriptional regulatory protein, C terminal ABM06_05145 PF08521 Two-component sensor kinase N-terminal ABM06_05145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABM06_05145 PF00512 His Kinase A (phospho-acceptor) domain ABM06_05155 PF00072 Response regulator receiver domain ABM06_05155 PF00196 Bacterial regulatory proteins, luxR family ABM06_05180 PF03466 LysR substrate binding domain ABM06_05180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABM06_05190 PF07690 Major Facilitator Superfamily ABM06_05195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABM06_05195 PF00512 His Kinase A (phospho-acceptor) domain ABM06_05205 PF00375 Sodium:dicarboxylate symporter family ABM06_05210 PF00390 Malic enzyme, N-terminal domain ABM06_05210 PF01515 Phosphate acetyl/butaryl transferase ABM06_05210 PF03949 Malic enzyme, NAD binding domain ABM06_05220 PF01527 Transposase ABM06_05225 PF13683 Integrase core domain ABM06_05225 PF13276 HTH-like domain ABM06_05235 PF01527 Transposase ABM06_05250 PF02581 Thiamine monophosphate synthase ABM06_05255 PF00301 Rubredoxin ABM06_05260 PF13369 Transglutaminase-like superfamily ABM06_05270 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ABM06_05280 PF01812 5-formyltetrahydrofolate cyclo-ligase family ABM06_05285 PF05164 Cell division protein ZapA ABM06_05295 PF03695 Uncharacterised protein family (UPF0149) ABM06_05300 PF00557 Metallopeptidase family M24 ABM06_05300 PF05195 Aminopeptidase P, N-terminal domain ABM06_05310 PF00557 Metallopeptidase family M24 ABM06_05325 PF04055 Radical SAM superfamily ABM06_05325 PF06969 HemN C-terminal domain ABM06_05330 PF01725 Ham1 family ABM06_05340 PF01138 3' exoribonuclease family, domain 1 ABM06_05340 PF03725 3' exoribonuclease family, domain 2 ABM06_05345 PF03755 YicC-like family, N-terminal region ABM06_05345 PF08340 Domain of unknown function (DUF1732) ABM06_05350 PF00625 Guanylate kinase ABM06_05360 PF01192 RNA polymerase Rpb6 ABM06_05365 PF13291 ACT domain ABM06_05365 PF02824 TGS domain ABM06_05365 PF04607 Region found in RelA / SpoT proteins ABM06_05370 PF01042 Endoribonuclease L-PSP ABM06_05375 PF00271 Helicase conserved C-terminal domain ABM06_05375 PF00270 DEAD/DEAH box helicase ABM06_05375 PF17191 RecG wedge domain ABM06_05380 PF01156 Inosine-uridine preferring nucleoside hydrolase ABM06_05385 PF01197 Ribosomal protein L31 ABM06_05390 PF00285 Citrate synthase, C-terminal domain ABM06_05400 PF00912 Transglycosylase ABM06_05400 PF17092 Penicillin-binding protein OB-like domain ABM06_05400 PF00905 Penicillin binding protein transpeptidase domain ABM06_05425 PF11741 AMIN domain ABM06_05425 PF00263 Bacterial type II and III secretion system protein ABM06_05425 PF03958 Bacterial type II/III secretion system short domain ABM06_05425 PF07660 Secretin and TonB N terminus short domain ABM06_05445 PF07726 ATPase family associated with various cellular activities (AAA) ABM06_05445 PF17863 AAA lid domain ABM06_05465 PF07584 Aerotolerance regulator N-terminal ABM06_05465 PF00092 von Willebrand factor type A domain ABM06_05480 PF00375 Sodium:dicarboxylate symporter family ABM06_05485 PF00456 Transketolase, thiamine diphosphate binding domain ABM06_05485 PF02780 Transketolase, C-terminal domain ABM06_05485 PF02779 Transketolase, pyrimidine binding domain ABM06_05490 PF00593 TonB dependent receptor ABM06_05490 PF07715 TonB-dependent Receptor Plug Domain ABM06_05495 PF01551 Peptidase family M23 ABM06_05495 PF04225 Opacity-associated protein A LysM-like domain ABM06_05500 PF03734 L,D-transpeptidase catalytic domain ABM06_05500 PF01476 LysM domain ABM06_05525 PF00501 AMP-binding enzyme ABM06_05545 PF00486 Transcriptional regulatory protein, C terminal ABM06_05545 PF00072 Response regulator receiver domain ABM06_05550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABM06_05550 PF08521 Two-component sensor kinase N-terminal ABM06_05550 PF00512 His Kinase A (phospho-acceptor) domain ABM06_05570 PF00005 ABC transporter ABM06_05570 PF03459 TOBE domain ABM06_05575 PF00528 Binding-protein-dependent transport system inner membrane component ABM06_05585 PF00753 Metallo-beta-lactamase superfamily ABM06_05585 PF04273 Putative phosphatase (DUF442) ABM06_05620 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ABM06_05620 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ABM06_05625 PF13340 Putative transposase of IS4/5 family (DUF4096) ABM06_05640 PF00672 HAMP domain ABM06_05640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABM06_05640 PF00512 His Kinase A (phospho-acceptor) domain ABM06_05645 PF00486 Transcriptional regulatory protein, C terminal ABM06_05645 PF00072 Response regulator receiver domain ABM06_05655 PF08443 RimK-like ATP-grasp domain ABM06_05655 PF18030 RimK PreATP-grasp domain ABM06_05695 PF00027 Cyclic nucleotide-binding domain ABM06_05695 PF00520 Ion transport protein ABM06_05700 PF00202 Aminotransferase class-III ABM06_05715 PF01593 Flavin containing amine oxidoreductase ABM06_05720 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ABM06_05720 PF00034 Cytochrome c ABM06_05735 PF00155 Aminotransferase class I and II ABM06_05745 PF00127 Copper binding proteins, plastocyanin/azurin family ABM06_05755 PF00202 Aminotransferase class-III ABM06_05780 PF03377 TAL effector repeat ABM06_05795 PF03377 TAL effector repeat ABM06_05810 PF03377 TAL effector repeat ABM06_05825 PF03377 TAL effector repeat ABM06_05845 PF01208 Uroporphyrinogen decarboxylase (URO-D) ABM06_05855 PF01761 3-dehydroquinate synthase ABM06_05860 PF01202 Shikimate kinase ABM06_05865 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ABM06_05865 PF01243 Pyridoxamine 5'-phosphate oxidase ABM06_05875 PF04012 PspA/IM30 family ABM06_05900 PF03738 Glutathionylspermidine synthase preATP-grasp ABM06_05925 PF09278 MerR, DNA binding ABM06_05925 PF00376 MerR family regulatory protein ABM06_05960 PF12706 Beta-lactamase superfamily domain ABM06_05980 PF00324 Amino acid permease ABM06_05985 PF00196 Bacterial regulatory proteins, luxR family ABM06_05990 PF00561 alpha/beta hydrolase fold ABM06_05995 PF00324 Amino acid permease ABM06_06005 PF01654 Cytochrome bd terminal oxidase subunit I ABM06_06010 PF02322 Cytochrome bd terminal oxidase subunit II ABM06_06015 PF00756 Putative esterase ABM06_06020 PF00571 CBS domain ABM06_06020 PF03448 MgtE intracellular N domain ABM06_06020 PF01769 Divalent cation transporter ABM06_06025 PF00391 PEP-utilising enzyme, mobile domain ABM06_06025 PF02896 PEP-utilising enzyme, TIM barrel domain ABM06_06025 PF05524 PEP-utilising enzyme, N-terminal ABM06_06030 PF00381 PTS HPr component phosphorylation site ABM06_06040 PF03668 P-loop ATPase protein family ABM06_06045 PF07475 HPr Serine kinase C-terminal domain ABM06_06045 PF02603 HPr Serine kinase N terminus ABM06_06050 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ABM06_06055 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ABM06_06060 PF04552 Sigma-54, DNA binding domain ABM06_06060 PF04963 Sigma-54 factor, core binding domain ABM06_06060 PF00309 Sigma-54 factor, Activator interacting domain (AID) ABM06_06065 PF00005 ABC transporter ABM06_06070 PF03968 OstA-like protein ABM06_06085 PF00571 CBS domain ABM06_06085 PF01380 SIS domain ABM06_06090 PF01722 BolA-like protein ABM06_06095 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ABM06_06115 PF00551 Formyl transferase ABM06_06130 PF00586 AIR synthase related protein, N-terminal domain ABM06_06130 PF02769 AIR synthase related protein, C-terminal domain ABM06_06140 PF01594 AI-2E family transporter ABM06_06145 PF00308 Bacterial dnaA protein ABM06_06150 PF00483 Nucleotidyl transferase ABM06_06155 PF01636 Phosphotransferase enzyme family ABM06_06175 PF07687 Peptidase dimerisation domain ABM06_06175 PF01546 Peptidase family M20/M25/M40 ABM06_06190 PF01527 Transposase ABM06_06205 PF05598 Transposase domain (DUF772) ABM06_06220 PF06964 Alpha-L-arabinofuranosidase C-terminal domain ABM06_06225 PF01263 Aldose 1-epimerase ABM06_06230 PF01578 Cytochrome C assembly protein ABM06_06240 PF02881 SRP54-type protein, helical bundle domain ABM06_06240 PF00448 SRP54-type protein, GTPase domain ABM06_06240 PF02978 Signal peptide binding domain ABM06_06250 PF03060 Nitronate monooxygenase ABM06_06260 PF00886 Ribosomal protein S16 ABM06_06265 PF01782 RimM N-terminal domain ABM06_06265 PF05239 PRC-barrel domain ABM06_06270 PF01746 tRNA (Guanine-1)-methyltransferase ABM06_06275 PF01245 Ribosomal protein L19 ABM06_06280 PF01554 MatE ABM06_06285 PF01479 S4 domain ABM06_06310 PF01541 GIY-YIG catalytic domain ABM06_06315 PF10431 C-terminal, D2-small domain, of ClpB protein ABM06_06315 PF02861 Clp amino terminal domain, pathogenicity island component ABM06_06315 PF17871 AAA lid domain ABM06_06315 PF07724 AAA domain (Cdc48 subfamily) ABM06_06315 PF00004 ATPase family associated with various cellular activities (AAA) ABM06_06330 PF01527 Transposase ABM06_06345 PF00593 TonB dependent receptor ABM06_06345 PF07715 TonB-dependent Receptor Plug Domain ABM06_06365 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP ABM06_06365 PF12557 Cob(I)alamin adenosyltransferase N terminal ABM06_06375 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase ABM06_06380 PF02277 Phosphoribosyltransferase ABM06_06390 PF02654 Cobalamin-5-phosphate synthase ABM06_06395 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ABM06_06395 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ABM06_06405 PF07690 Major Facilitator Superfamily ABM06_06410 PF06276 Ferric iron reductase FhuF-like transporter ABM06_06410 PF04183 IucA / IucC family ABM06_06420 PF07715 TonB-dependent Receptor Plug Domain ABM06_06420 PF07660 Secretin and TonB N terminus short domain ABM06_06420 PF00593 TonB dependent receptor ABM06_06430 PF13683 Integrase core domain ABM06_06430 PF13276 HTH-like domain ABM06_06435 PF02254 TrkA-N domain ABM06_06435 PF00999 Sodium/hydrogen exchanger family ABM06_06445 PF07715 TonB-dependent Receptor Plug Domain ABM06_06445 PF00593 TonB dependent receptor ABM06_06450 PF07715 TonB-dependent Receptor Plug Domain ABM06_06450 PF00593 TonB dependent receptor ABM06_06460 PF07715 TonB-dependent Receptor Plug Domain ABM06_06460 PF00593 TonB dependent receptor ABM06_06465 PF00005 ABC transporter ABM06_06465 PF12848 ABC transporter ABM06_06475 PF03466 LysR substrate binding domain ABM06_06475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABM06_06485 PF07859 alpha/beta hydrolase fold ABM06_06485 PF13472 GDSL-like Lipase/Acylhydrolase family ABM06_06510 PF12833 Helix-turn-helix domain ABM06_06515 PF00183 Hsp90 protein ABM06_06515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABM06_06530 PF13276 HTH-like domain ABM06_06535 PF01527 Transposase ABM06_06545 PF00872 Transposase, Mutator family ABM06_06560 PF01053 Cys/Met metabolism PLP-dependent enzyme ABM06_06575 PF13276 HTH-like domain ABM06_06575 PF13683 Integrase core domain ABM06_06580 PF01527 Transposase ABM06_06585 PF05598 Transposase domain (DUF772) ABM06_06585 PF01609 Transposase DDE domain ABM06_06590 PF00355 Rieske [2Fe-2S] domain ABM06_06600 PF00266 Aminotransferase class-V ABM06_06605 PF01458 Uncharacterized protein family (UPF0051) ABM06_06610 PF00005 ABC transporter ABM06_06615 PF01458 Uncharacterized protein family (UPF0051) ABM06_06620 PF02082 Transcriptional regulator ABM06_06670 PF03807 NADP oxidoreductase coenzyme F420-dependent ABM06_06670 PF14748 Pyrroline-5-carboxylate reductase dimerisation ABM06_06675 PF01168 Alanine racemase, N-terminal domain ABM06_06685 PF00437 Type II/IV secretion system protein ABM06_06700 PF00958 GMP synthase C terminal domain ABM06_06700 PF00117 Glutamine amidotransferase class-I ABM06_06700 PF03352 Methyladenine glycosylase ABM06_06700 PF13302 Acetyltransferase (GNAT) domain ABM06_06700 PF13673 Acetyltransferase (GNAT) domain ABM06_06715 PF02622 Uncharacterized ACR, COG1678 ABM06_06720 PF03652 Holliday junction resolvase ABM06_06725 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ABM06_06725 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ABM06_06730 PF02566 OsmC-like protein ABM06_06740 PF02567 Phenazine biosynthesis-like protein ABM06_06745 PF02567 Phenazine biosynthesis-like protein ABM06_06750 PF02567 Phenazine biosynthesis-like protein ABM06_06755 PF00696 Amino acid kinase family ABM06_06755 PF01842 ACT domain ABM06_06770 PF08245 Mur ligase middle domain ABM06_06785 PF00348 Polyprenyl synthetase ABM06_06790 PF00436 Single-strand binding protein family ABM06_06795 PF00563 EAL domain ABM06_06795 PF01590 GAF domain ABM06_06795 PF00990 Diguanylate cyclase, GGDEF domain ABM06_06795 PF00360 Phytochrome region ABM06_06800 PF00109 Beta-ketoacyl synthase, N-terminal domain ABM06_06800 PF02801 Beta-ketoacyl synthase, C-terminal domain ABM06_06800 PF16197 Ketoacyl-synthetase C-terminal extension ABM06_06800 PF08659 KR domain ABM06_06800 PF08240 Alcohol dehydrogenase GroES-like domain ABM06_06800 PF00698 Acyl transferase domain ABM06_06800 PF00107 Zinc-binding dehydrogenase ABM06_06800 PF14765 Polyketide synthase dehydratase ABM06_06800 PF00550 Phosphopantetheine attachment site ABM06_06825 PF04328 Selenoprotein, putative ABM06_06830 PF13722 5TM C-terminal transporter carbon starvation CstA ABM06_06830 PF02554 Carbon starvation protein CstA ABM06_06835 PF05726 Pirin C-terminal cupin domain ABM06_06835 PF02678 Pirin ABM06_06845 PF04717 Type VI secretion system, phage-baseplate injector ABM06_06860 PF04717 Type VI secretion system, phage-baseplate injector ABM06_06870 PF05598 Transposase domain (DUF772) ABM06_06870 PF01609 Transposase DDE domain ABM06_06895 PF04717 Type VI secretion system, phage-baseplate injector ABM06_06930 PF02678 Pirin ABM06_06930 PF05726 Pirin C-terminal cupin domain ABM06_06940 PF04493 Endonuclease V ABM06_06945 PF00300 Histidine phosphatase superfamily (branch 1) ABM06_06955 PF05649 Peptidase family M13 ABM06_06955 PF01431 Peptidase family M13 ABM06_06965 PF01339 CheB methylesterase ABM06_06965 PF00072 Response regulator receiver domain ABM06_06970 PF01739 CheR methyltransferase, SAM binding domain ABM06_06970 PF03705 CheR methyltransferase, all-alpha domain ABM06_06975 PF00563 EAL domain ABM06_06975 PF00990 Diguanylate cyclase, GGDEF domain ABM06_06975 PF13426 PAS domain ABM06_06980 PF01584 CheW-like domain ABM06_06985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABM06_06985 PF00672 HAMP domain ABM06_06985 PF02203 Tar ligand binding domain homologue ABM06_06990 PF01627 Hpt domain ABM06_06990 PF02895 Signal transducing histidine kinase, homodimeric domain ABM06_06990 PF01584 CheW-like domain ABM06_06990 PF09078 CheY binding ABM06_06990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABM06_07000 PF17757 UvrB interaction domain ABM06_07000 PF00271 Helicase conserved C-terminal domain ABM06_07000 PF00270 DEAD/DEAH box helicase ABM06_07000 PF02559 CarD-like/TRCF domain ABM06_07000 PF03461 TRCF domain ABM06_07010 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ ABM06_07020 PF00512 His Kinase A (phospho-acceptor) domain ABM06_07020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABM06_07020 PF00672 HAMP domain ABM06_07045 PF01609 Transposase DDE domain ABM06_07045 PF05598 Transposase domain (DUF772) ABM06_07065 PF01609 Transposase DDE domain ABM06_07065 PF05598 Transposase domain (DUF772) ABM06_07080 PF05598 Transposase domain (DUF772) ABM06_07080 PF01609 Transposase DDE domain ABM06_07110 PF00749 tRNA synthetases class I (E and Q), catalytic domain ABM06_07115 PF01475 Ferric uptake regulator family ABM06_07140 PF00313 'Cold-shock' DNA-binding domain ABM06_07155 PF00899 ThiF family ABM06_07160 PF01026 TatD related DNase ABM06_07175 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABM06_07175 PF02770 Acyl-CoA dehydrogenase, middle domain ABM06_07175 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABM06_07195 PF13417 Glutathione S-transferase, N-terminal domain ABM06_07200 PF00733 Asparagine synthase ABM06_07200 PF13537 Glutamine amidotransferase domain ABM06_07205 PF03358 NADPH-dependent FMN reductase ABM06_07210 PF03796 DnaB-like helicase C terminal domain ABM06_07210 PF00772 DnaB-like helicase N terminal domain ABM06_07215 PF03441 FAD binding domain of DNA photolyase ABM06_07215 PF00875 DNA photolyase ABM06_07225 PF00691 OmpA family ABM06_07225 PF05736 OprF membrane domain ABM06_07245 PF00593 TonB dependent receptor ABM06_07245 PF07715 TonB-dependent Receptor Plug Domain ABM06_07265 PF08240 Alcohol dehydrogenase GroES-like domain ABM06_07265 PF00107 Zinc-binding dehydrogenase ABM06_07270 PF00654 Voltage gated chloride channel ABM06_07280 PF05598 Transposase domain (DUF772) ABM06_07280 PF01609 Transposase DDE domain ABM06_07285 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ABM06_07285 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ABM06_07290 PF00730 HhH-GPD superfamily base excision DNA repair protein ABM06_07290 PF02805 Metal binding domain of Ada ABM06_07290 PF06029 AlkA N-terminal domain ABM06_07290 PF12833 Helix-turn-helix domain ABM06_07340 PF00270 DEAD/DEAH box helicase ABM06_07340 PF03880 DbpA RNA binding domain ABM06_07340 PF00271 Helicase conserved C-terminal domain ABM06_07345 PF08448 PAS fold ABM06_07345 PF00990 Diguanylate cyclase, GGDEF domain ABM06_07345 PF00563 EAL domain ABM06_07350 PF01479 S4 domain ABM06_07350 PF00849 RNA pseudouridylate synthase ABM06_07365 PF03737 Aldolase/RraA ABM06_07370 PF00144 Beta-lactamase ABM06_07375 PF00999 Sodium/hydrogen exchanger family ABM06_07380 PF00512 His Kinase A (phospho-acceptor) domain ABM06_07380 PF00672 HAMP domain ABM06_07380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABM06_07385 PF00486 Transcriptional regulatory protein, C terminal ABM06_07385 PF00072 Response regulator receiver domain ABM06_07390 PF02321 Outer membrane efflux protein ABM06_07405 PF00873 AcrB/AcrD/AcrF family ABM06_07415 PF00664 ABC transporter transmembrane region ABM06_07415 PF00005 ABC transporter ABM06_07425 PF13340 Putative transposase of IS4/5 family (DUF4096) ABM06_07435 PF05598 Transposase domain (DUF772) ABM06_07435 PF01609 Transposase DDE domain ABM06_07445 PF01609 Transposase DDE domain ABM06_07445 PF05598 Transposase domain (DUF772) ABM06_07455 PF01609 Transposase DDE domain ABM06_07455 PF05598 Transposase domain (DUF772) ABM06_07475 PF01121 Dephospho-CoA kinase ABM06_07480 PF01478 Type IV leader peptidase family ABM06_07480 PF06750 Bacterial Peptidase A24 N-terminal domain ABM06_07485 PF00482 Type II secretion system (T2SS), protein F ABM06_07490 PF00114 Pilin (bacterial filament) ABM06_07490 PF07963 Prokaryotic N-terminal methylation motif ABM06_07495 PF00884 Sulfatase ABM06_07495 PF08019 Phosphoethanolamine transferase EptA/EptB ABM06_07510 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ABM06_07510 PF00437 Type II/IV secretion system protein ABM06_07515 PF18543 Intracellular delivery domain ABM06_07515 PF02661 Fic/DOC family ABM06_07520 PF00072 Response regulator receiver domain ABM06_07520 PF02954 Bacterial regulatory protein, Fis family ABM06_07520 PF00158 Sigma-54 interaction domain ABM06_07525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABM06_07525 PF00512 His Kinase A (phospho-acceptor) domain ABM06_07530 PF00549 CoA-ligase ABM06_07530 PF08442 ATP-grasp domain ABM06_07535 PF00549 CoA-ligase ABM06_07535 PF02629 CoA binding domain ABM06_07545 PF00795 Carbon-nitrogen hydrolase ABM06_07545 PF02540 NAD synthase ABM06_07550 PF13525 Outer membrane lipoprotein ABM06_07555 PF00849 RNA pseudouridylate synthase ABM06_07575 PF00982 Glycosyltransferase family 20 ABM06_07580 PF00723 Glycosyl hydrolases family 15 ABM06_07585 PF02358 Trehalose-phosphatase ABM06_07595 PF07715 TonB-dependent Receptor Plug Domain ABM06_07595 PF00593 TonB dependent receptor ABM06_07625 PF04376 Arginine-tRNA-protein transferase, N terminus ABM06_07625 PF04377 Arginine-tRNA-protein transferase, C terminus ABM06_07645 PF04542 Sigma-70 region 2 ABM06_07645 PF08281 Sigma-70, region 4 ABM06_07660 PF00378 Enoyl-CoA hydratase/isomerase ABM06_07675 PF17755 UvrA DNA-binding domain ABM06_07675 PF17760 UvrA interaction domain ABM06_07675 PF00005 ABC transporter ABM06_07680 PF00829 Ribosomal prokaryotic L21 protein ABM06_07685 PF01016 Ribosomal L27 protein ABM06_07690 PF01018 GTP1/OBG ABM06_07690 PF01926 50S ribosome-binding GTPase ABM06_07695 PF01649 Ribosomal protein S20 ABM06_07700 PF03023 Lipid II flippase MurJ ABM06_07705 PF01687 Riboflavin kinase ABM06_07705 PF06574 FAD synthetase ABM06_07710 PF08264 Anticodon-binding domain of tRNA ABM06_07710 PF00133 tRNA synthetases class I (I, L, M and V) ABM06_07710 PF06827 Zinc finger found in FPG and IleRS ABM06_07715 PF01252 Signal peptidase (SPase) II ABM06_07720 PF02401 LytB protein ABM06_07730 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ABM06_07730 PF06481 COX Aromatic Rich Motif ABM06_07735 PF00115 Cytochrome C and Quinol oxidase polypeptide I ABM06_07740 PF00510 Cytochrome c oxidase subunit III ABM06_07745 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ABM06_07755 PF04717 Type VI secretion system, phage-baseplate injector ABM06_07780 PF01527 Transposase ABM06_07785 PF13276 HTH-like domain ABM06_07785 PF13683 Integrase core domain ABM06_07800 PF01624 MutS domain I ABM06_07800 PF05192 MutS domain III ABM06_07800 PF00488 MutS domain V ABM06_07800 PF05190 MutS family domain IV ABM06_07800 PF05188 MutS domain II ABM06_07810 PF13276 HTH-like domain ABM06_07810 PF13683 Integrase core domain ABM06_07815 PF01527 Transposase ABM06_07825 PF18073 Rubredoxin metal binding domain ABM06_07835 PF01527 Transposase ABM06_07845 PF04185 Phosphoesterase family ABM06_07845 PF05506 Domain of unknown function (DUF756) ABM06_07850 PF05506 Domain of unknown function (DUF756) ABM06_07850 PF04185 Phosphoesterase family ABM06_07855 PF05506 Domain of unknown function (DUF756) ABM06_07855 PF04185 Phosphoesterase family ABM06_07875 PF00152 tRNA synthetases class II (D, K and N) ABM06_07875 PF01336 OB-fold nucleic acid binding domain ABM06_07875 PF02938 GAD domain ABM06_07890 PF01709 Transcriptional regulator ABM06_07895 PF02075 Crossover junction endodeoxyribonuclease RuvC ABM06_07900 PF07499 RuvA, C-terminal domain ABM06_07900 PF01330 RuvA N terminal domain ABM06_07905 PF02705 K+ potassium transporter ABM06_07910 PF05496 Holliday junction DNA helicase RuvB P-loop domain ABM06_07910 PF17864 RuvB AAA lid domain ABM06_07910 PF05491 RuvB C-terminal winged helix domain ABM06_07915 PF03061 Thioesterase superfamily ABM06_07920 PF01618 MotA/TolQ/ExbB proton channel family ABM06_07925 PF02472 Biopolymer transport protein ExbD/TolR ABM06_07935 PF07676 WD40-like Beta Propeller Repeat ABM06_07935 PF04052 TolB amino-terminal domain ABM06_07940 PF00691 OmpA family ABM06_07950 PF04055 Radical SAM superfamily ABM06_07955 PF00849 RNA pseudouridylate synthase ABM06_07955 PF01479 S4 domain ABM06_07985 PF01609 Transposase DDE domain ABM06_07985 PF05598 Transposase domain (DUF772) ABM06_08010 PF13340 Putative transposase of IS4/5 family (DUF4096) ABM06_08015 PF05598 Transposase domain (DUF772) ABM06_08020 PF06508 Queuosine biosynthesis protein QueC ABM06_08040 PF09382 RQC domain ABM06_08040 PF16124 RecQ zinc-binding ABM06_08040 PF00570 HRDC domain ABM06_08040 PF00271 Helicase conserved C-terminal domain ABM06_08040 PF00270 DEAD/DEAH box helicase ABM06_08045 PF00210 Ferritin-like domain ABM06_08050 PF00270 DEAD/DEAH box helicase ABM06_08050 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ABM06_08050 PF00271 Helicase conserved C-terminal domain ABM06_08050 PF11898 Domain of unknown function (DUF3418) ABM06_08050 PF04408 Helicase associated domain (HA2) ABM06_08060 PF02685 Glucokinase ABM06_08065 PF02685 Glucokinase ABM06_08070 PF02685 Glucokinase ABM06_08080 PF13340 Putative transposase of IS4/5 family (DUF4096) ABM06_08095 PF13186 Iron-sulfur cluster-binding domain ABM06_08095 PF04055 Radical SAM superfamily ABM06_08100 PF05402 Coenzyme PQQ synthesis protein D (PqqD) ABM06_08105 PF03070 TENA/THI-4/PQQC family ABM06_08110 PF12706 Beta-lactamase superfamily domain ABM06_08115 PF02824 TGS domain ABM06_08115 PF13291 ACT domain ABM06_08115 PF04607 Region found in RelA / SpoT proteins ABM06_08125 PF00535 Glycosyl transferase family 2 ABM06_08130 PF14814 Bifunctional transglycosylase second domain ABM06_08130 PF00912 Transglycosylase ABM06_08130 PF00905 Penicillin binding protein transpeptidase domain ABM06_08140 PF13307 Helicase C-terminal domain ABM06_08140 PF04851 Type III restriction enzyme, res subunit ABM06_08145 PF00814 Glycoprotease family ABM06_08150 PF03747 ADP-ribosylglycohydrolase ABM06_08160 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ABM06_08160 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ABM06_08165 PF00072 Response regulator receiver domain ABM06_08170 PF00072 Response regulator receiver domain ABM06_08175 PF01584 CheW-like domain ABM06_08180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABM06_08180 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term ABM06_08185 PF01584 CheW-like domain ABM06_08185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABM06_08185 PF00072 Response regulator receiver domain ABM06_08185 PF01627 Hpt domain ABM06_08200 PF13302 Acetyltransferase (GNAT) domain ABM06_08215 PF12034 Domain of unknown function (DUF3520) ABM06_08215 PF12450 von Willebrand factor ABM06_08215 PF00092 von Willebrand factor type A domain ABM06_08230 PF01112 Asparaginase ABM06_08235 PF03932 CutC family ABM06_08280 PF01301 Glycosyl hydrolases family 35 ABM06_08285 PF07971 Glycosyl hydrolase family 92 ABM06_08285 PF17678 Glycosyl hydrolase family 92 N-terminal domain ABM06_08340 PF03412 Peptidase C39 family ABM06_08340 PF00005 ABC transporter ABM06_08340 PF00664 ABC transporter transmembrane region ABM06_08345 PF00933 Glycosyl hydrolase family 3 N terminal domain ABM06_08345 PF01915 Glycosyl hydrolase family 3 C-terminal domain ABM06_08345 PF07691 PA14 domain ABM06_08345 PF14310 Fibronectin type III-like domain ABM06_08355 PF07691 PA14 domain ABM06_08355 PF00728 Glycosyl hydrolase family 20, catalytic domain ABM06_08355 PF02838 Glycosyl hydrolase family 20, domain 2 ABM06_08360 PF01476 LysM domain ABM06_08360 PF00704 Glycosyl hydrolases family 18 ABM06_08375 PF02685 Glucokinase ABM06_08380 PF04452 RNA methyltransferase ABM06_08385 PF00202 Aminotransferase class-III ABM06_08390 PF00293 NUDIX domain ABM06_08395 PF00459 Inositol monophosphatase family ABM06_08400 PF03819 MazG nucleotide pyrophosphohydrolase domain ABM06_08410 PF16200 C-terminal region of band_7 ABM06_08410 PF01145 SPFH domain / Band 7 family ABM06_08420 PF01571 Aminomethyltransferase folate-binding domain ABM06_08420 PF08669 Glycine cleavage T-protein C-terminal barrel domain ABM06_08425 PF01597 Glycine cleavage H-protein ABM06_08450 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABM06_08450 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABM06_08450 PF09317 Domain of unknown function (DUF1974) ABM06_08460 PF00440 Bacterial regulatory proteins, tetR family ABM06_08465 PF07715 TonB-dependent Receptor Plug Domain ABM06_08465 PF00593 TonB dependent receptor ABM06_08475 PF01430 Hsp33 protein ABM06_08480 PF00912 Transglycosylase ABM06_08485 PF00535 Glycosyl transferase family 2 ABM06_08490 PF00571 CBS domain ABM06_08490 PF00478 IMP dehydrogenase / GMP reductase domain ABM06_08500 PF03006 Haemolysin-III related ABM06_08505 PF16658 Class II release factor RF3, C-terminal domain ABM06_08505 PF00009 Elongation factor Tu GTP binding domain ABM06_08510 PF01476 LysM domain ABM06_08510 PF08525 Opacity-associated protein A N-terminal motif ABM06_08510 PF01551 Peptidase family M23 ABM06_08515 PF00561 alpha/beta hydrolase fold ABM06_08520 PF01053 Cys/Met metabolism PLP-dependent enzyme ABM06_08530 PF03313 Serine dehydratase alpha chain ABM06_08530 PF03315 Serine dehydratase beta chain ABM06_08540 PF04264 YceI-like domain ABM06_08550 PF04264 YceI-like domain ABM06_08555 PF01627 Hpt domain ABM06_08555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABM06_08555 PF00512 His Kinase A (phospho-acceptor) domain ABM06_08555 PF17149 Periplasmic sensor domain found in signal transduction proteins ABM06_08555 PF00072 Response regulator receiver domain ABM06_08555 PF00672 HAMP domain ABM06_08560 PF17149 Periplasmic sensor domain found in signal transduction proteins ABM06_08560 PF00672 HAMP domain ABM06_08560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABM06_08560 PF00512 His Kinase A (phospho-acceptor) domain ABM06_08560 PF00072 Response regulator receiver domain ABM06_08560 PF01627 Hpt domain ABM06_08565 PF17149 Periplasmic sensor domain found in signal transduction proteins ABM06_08565 PF00672 HAMP domain ABM06_08565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABM06_08565 PF00512 His Kinase A (phospho-acceptor) domain ABM06_08565 PF01627 Hpt domain ABM06_08565 PF00072 Response regulator receiver domain ABM06_08600 PF07745 Glycosyl hydrolase family 53 ABM06_08615 PF06114 IrrE N-terminal-like domain ABM06_08615 PF09856 Predicted transcriptional regulator (DUF2083) ABM06_08615 PF01381 Helix-turn-helix ABM06_08620 PF00171 Aldehyde dehydrogenase family ABM06_08625 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABM06_08625 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABM06_08625 PF02770 Acyl-CoA dehydrogenase, middle domain ABM06_08630 PF00378 Enoyl-CoA hydratase/isomerase ABM06_08635 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABM06_08635 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABM06_08635 PF00378 Enoyl-CoA hydratase/isomerase ABM06_08640 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ABM06_08640 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ABM06_08645 PF01545 Cation efflux family ABM06_08650 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABM06_08650 PF00378 Enoyl-CoA hydratase/isomerase ABM06_08650 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABM06_08655 PF04542 Sigma-70 region 2 ABM06_08655 PF08281 Sigma-70, region 4 ABM06_08665 PF13180 PDZ domain ABM06_08670 PF06421 GTP-binding protein LepA C-terminus ABM06_08670 PF03144 Elongation factor Tu domain 2 ABM06_08670 PF00009 Elongation factor Tu GTP binding domain ABM06_08670 PF00679 Elongation factor G C-terminus ABM06_08675 PF10502 Signal peptidase, peptidase S26 ABM06_08685 PF14622 Ribonuclease-III-like ABM06_08685 PF00035 Double-stranded RNA binding motif ABM06_08690 PF01926 50S ribosome-binding GTPase ABM06_08690 PF07650 KH domain ABM06_08695 PF02565 Recombination protein O C terminal ABM06_08695 PF11967 Recombination protein O N terminal ABM06_08705 PF05958 tRNA (Uracil-5-)-methyltransferase ABM06_08720 PF05598 Transposase domain (DUF772) ABM06_08725 PF01323 DSBA-like thioredoxin domain ABM06_08730 PF01593 Flavin containing amine oxidoreductase ABM06_08735 PF04244 Deoxyribodipyrimidine photo-lyase-related protein ABM06_08740 PF00933 Glycosyl hydrolase family 3 N terminal domain ABM06_08750 PF01048 Phosphorylase superfamily ABM06_08755 PF00313 'Cold-shock' DNA-binding domain ABM06_08760 PF01494 FAD binding domain ABM06_08770 PF01494 FAD binding domain ABM06_08780 PF00270 DEAD/DEAH box helicase ABM06_08780 PF00271 Helicase conserved C-terminal domain ABM06_08780 PF08494 DEAD/H associated ABM06_08785 PF04679 ATP dependent DNA ligase C terminal region ABM06_08785 PF04675 DNA ligase N terminus ABM06_08785 PF01068 ATP dependent DNA ligase domain ABM06_08795 PF04675 DNA ligase N terminus ABM06_08795 PF01068 ATP dependent DNA ligase domain ABM06_08795 PF04679 ATP dependent DNA ligase C terminal region ABM06_08810 PF00072 Response regulator receiver domain ABM06_08810 PF00990 Diguanylate cyclase, GGDEF domain ABM06_08825 PF02803 Thiolase, C-terminal domain ABM06_08825 PF00108 Thiolase, N-terminal domain ABM06_08830 PF03797 Autotransporter beta-domain ABM06_08830 PF00082 Subtilase family ABM06_08830 PF12951 Passenger-associated-transport-repeat ABM06_08835 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABM06_08835 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ABM06_08840 PF01863 Protein of unknown function DUF45 ABM06_08845 PF07043 Protein of unknown function (DUF1328) ABM06_08855 PF01258 Prokaryotic dksA/traR C4-type zinc finger ABM06_08890 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABM06_08905 PF08274 PhnA Zinc-Ribbon ABM06_08905 PF03831 PhnA domain ABM06_08920 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABM06_08925 PF07690 Major Facilitator Superfamily ABM06_08975 PF03706 Lysylphosphatidylglycerol synthase TM region ABM06_08975 PF09924 Uncharacterised conserved protein (DUF2156) ABM06_08985 PF01042 Endoribonuclease L-PSP ABM06_09030 PF04545 Sigma-70, region 4 ABM06_09030 PF04542 Sigma-70 region 2 ABM06_09060 PF01588 Putative tRNA binding domain ABM06_09060 PF09334 tRNA synthetases class I (M) ABM06_09080 PF00324 Amino acid permease ABM06_09085 PF02574 Homocysteine S-methyltransferase ABM06_09095 PF02592 Putative vitamin uptake transporter ABM06_09110 PF05598 Transposase domain (DUF772) ABM06_09185 PF13732 Domain of unknown function (DUF4162) ABM06_09185 PF00005 ABC transporter ABM06_09190 PF07715 TonB-dependent Receptor Plug Domain ABM06_09190 PF00593 TonB dependent receptor ABM06_09200 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ABM06_09205 PF14579 Helix-hairpin-helix motif ABM06_09205 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ABM06_09205 PF07733 Bacterial DNA polymerase III alpha NTPase domain ABM06_09205 PF01336 OB-fold nucleic acid binding domain ABM06_09205 PF02811 PHP domain ABM06_09210 PF01351 Ribonuclease HII ABM06_09215 PF02684 Lipid-A-disaccharide synthetase ABM06_09220 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ABM06_09220 PF00132 Bacterial transferase hexapeptide (six repeats) ABM06_09225 PF07977 FabA-like domain ABM06_09230 PF00132 Bacterial transferase hexapeptide (six repeats) ABM06_09230 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ABM06_09235 PF07244 Surface antigen variable number repeat ABM06_09235 PF01103 Surface antigen ABM06_09240 PF17820 PDZ domain ABM06_09240 PF02163 Peptidase family M50 ABM06_09245 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ABM06_09245 PF13288 DXP reductoisomerase C-terminal domain ABM06_09245 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ABM06_09255 PF01255 Putative undecaprenyl diphosphate synthase ABM06_09260 PF01765 Ribosome recycling factor ABM06_09265 PF00696 Amino acid kinase family ABM06_09275 PF00889 Elongation factor TS ABM06_09280 PF00318 Ribosomal protein S2 ABM06_09315 PF00557 Metallopeptidase family M24 ABM06_09320 PF08335 GlnD PII-uridylyltransferase ABM06_09320 PF01966 HD domain ABM06_09320 PF01909 Nucleotidyltransferase domain ABM06_09325 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal ABM06_09325 PF14602 Hexapeptide repeat of succinyl-transferase ABM06_09325 PF00132 Bacterial transferase hexapeptide (six repeats) ABM06_09335 PF03960 ArsC family ABM06_09345 PF01546 Peptidase family M20/M25/M40 ABM06_09345 PF07687 Peptidase dimerisation domain ABM06_09350 PF00733 Asparagine synthase ABM06_09350 PF13537 Glutamine amidotransferase domain ABM06_09365 PF07715 TonB-dependent Receptor Plug Domain ABM06_09365 PF00593 TonB dependent receptor ABM06_09370 PF01804 Penicillin amidase ABM06_09375 PF00210 Ferritin-like domain ABM06_09380 PF00521 DNA gyrase/topoisomerase IV, subunit A ABM06_09380 PF03989 DNA gyrase C-terminal domain, beta-propeller ABM06_09395 PF02321 Outer membrane efflux protein ABM06_09400 PF00529 HlyD membrane-fusion protein of T1SS ABM06_09400 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABM06_09405 PF07690 Major Facilitator Superfamily ABM06_09440 PF00665 Integrase core domain ABM06_09440 PF13936 Helix-turn-helix domain ABM06_09460 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ABM06_09460 PF02780 Transketolase, C-terminal domain ABM06_09460 PF02779 Transketolase, pyrimidine binding domain ABM06_09470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABM06_09470 PF12806 Acetyl-CoA dehydrogenase C-terminal like ABM06_09470 PF02770 Acyl-CoA dehydrogenase, middle domain ABM06_09470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABM06_09490 PF01668 SmpB protein ABM06_09495 PF03364 Polyketide cyclase / dehydrase and lipid transport ABM06_09500 PF03658 RnfH family Ubiquitin ABM06_09505 PF04355 SmpA / OmlA family ABM06_09510 PF01475 Ferric uptake regulator family ABM06_09515 PF02463 RecF/RecN/SMC N terminal domain ABM06_09520 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding ABM06_09520 PF01628 HrcA protein C terminal domain ABM06_09525 PF01025 GrpE ABM06_09530 PF00012 Hsp70 protein ABM06_09535 PF01556 DnaJ C terminal domain ABM06_09535 PF00226 DnaJ domain ABM06_09535 PF00684 DnaJ central domain ABM06_09540 PF08543 Phosphomethylpyrimidine kinase ABM06_09545 PF02153 Prephenate dehydrogenase ABM06_09545 PF01817 Chorismate mutase type II ABM06_09560 PF03466 LysR substrate binding domain ABM06_09560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABM06_09565 PF00005 ABC transporter ABM06_09565 PF00664 ABC transporter transmembrane region ABM06_09570 PF01205 Uncharacterized protein family UPF0029 ABM06_09575 PF03641 Possible lysine decarboxylase ABM06_09580 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABM06_09580 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABM06_09585 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ABM06_09585 PF00364 Biotin-requiring enzyme ABM06_09585 PF02817 e3 binding domain ABM06_09590 PF16870 2-oxoglutarate dehydrogenase C-terminal ABM06_09590 PF02779 Transketolase, pyrimidine binding domain ABM06_09590 PF00676 Dehydrogenase E1 component ABM06_09590 PF16078 2-oxoglutarate dehydrogenase N-terminus ABM06_09600 PF08007 Cupin superfamily protein ABM06_09615 PF08328 Adenylosuccinate lyase C-terminal ABM06_09615 PF00206 Lyase ABM06_09635 PF13340 Putative transposase of IS4/5 family (DUF4096) ABM06_09645 PF13936 Helix-turn-helix domain ABM06_09645 PF00665 Integrase core domain ABM06_09655 PF00206 Lyase ABM06_09655 PF10415 Fumarase C C-terminus ABM06_09685 PF00005 ABC transporter ABM06_09690 PF00392 Bacterial regulatory proteins, gntR family ABM06_09695 PF00255 Glutathione peroxidase ABM06_09700 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABM06_09700 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ABM06_09705 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ABM06_09705 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ABM06_09705 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ABM06_09710 PF04102 SlyX ABM06_09730 PF07690 Major Facilitator Superfamily ABM06_09735 PF00294 pfkB family carbohydrate kinase ABM06_09745 PF00809 Pterin binding enzyme ABM06_09745 PF02574 Homocysteine S-methyltransferase ABM06_09745 PF02607 B12 binding domain ABM06_09745 PF02310 B12 binding domain ABM06_09745 PF02965 Vitamin B12 dependent methionine synthase, activation domain ABM06_09750 PF00809 Pterin binding enzyme ABM06_09750 PF02574 Homocysteine S-methyltransferase ABM06_09755 PF01209 ubiE/COQ5 methyltransferase family ABM06_09760 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABM06_09760 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABM06_09760 PF02770 Acyl-CoA dehydrogenase, middle domain ABM06_09780 PF08461 Ribonuclease R winged-helix domain ABM06_09780 PF17876 Cold shock domain ABM06_09780 PF00773 RNB domain ABM06_09780 PF08206 Ribonuclease B OB domain ABM06_09780 PF00575 S1 RNA binding domain ABM06_09800 PF00588 SpoU rRNA Methylase family ABM06_09800 PF08032 RNA 2'-O ribose methyltransferase substrate binding ABM06_09810 PF05598 Transposase domain (DUF772) ABM06_09810 PF01609 Transposase DDE domain ABM06_09825 PF00872 Transposase, Mutator family ABM06_09835 PF00313 'Cold-shock' DNA-binding domain ABM06_09840 PF00561 alpha/beta hydrolase fold ABM06_09860 PF01609 Transposase DDE domain ABM06_09860 PF05598 Transposase domain (DUF772) ABM06_09870 PF05598 Transposase domain (DUF772) ABM06_09875 PF13276 HTH-like domain ABM06_09875 PF13683 Integrase core domain ABM06_09880 PF01527 Transposase ABM06_09890 PF03544 Gram-negative bacterial TonB protein C-terminal ABM06_09895 PF02403 Seryl-tRNA synthetase N-terminal domain ABM06_09895 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABM06_09910 PF05598 Transposase domain (DUF772) ABM06_09910 PF01609 Transposase DDE domain ABM06_09915 PF02525 Flavodoxin-like fold ABM06_09920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABM06_09920 PF03466 LysR substrate binding domain ABM06_09935 PF03377 TAL effector repeat ABM06_09950 PF03377 TAL effector repeat ABM06_09960 PF13276 HTH-like domain ABM06_09960 PF00665 Integrase core domain ABM06_09960 PF13333 Integrase core domain ABM06_09970 PF03377 TAL effector repeat ABM06_09995 PF03079 ARD/ARD' family ABM06_10000 PF00596 Class II Aldolase and Adducin N-terminal domain ABM06_10005 PF13520 Amino acid permease ABM06_10010 PF13520 Amino acid permease ABM06_10020 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABM06_10020 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABM06_10025 PF01565 FAD binding domain ABM06_10025 PF02913 FAD linked oxidases, C-terminal domain ABM06_10050 PF03918 Cytochrome C biogenesis protein ABM06_10055 PF08534 Redoxin ABM06_10060 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal ABM06_10060 PF01578 Cytochrome C assembly protein ABM06_10065 PF03100 CcmE ABM06_10075 PF01578 Cytochrome C assembly protein ABM06_10080 PF03379 CcmB protein ABM06_10085 PF00005 ABC transporter ABM06_10090 PF00155 Aminotransferase class I and II ABM06_10095 PF00795 Carbon-nitrogen hydrolase ABM06_10115 PF01479 S4 domain ABM06_10115 PF00849 RNA pseudouridylate synthase ABM06_10120 PF04079 Segregation and condensation complex subunit ScpB ABM06_10125 PF02616 Segregation and condensation protein ScpA ABM06_10130 PF03795 YCII-related domain ABM06_10140 PF00356 Bacterial regulatory proteins, lacI family ABM06_10160 PF00528 Binding-protein-dependent transport system inner membrane component ABM06_10165 PF00528 Binding-protein-dependent transport system inner membrane component ABM06_10190 PF00795 Carbon-nitrogen hydrolase ABM06_10195 PF04371 Porphyromonas-type peptidyl-arginine deiminase ABM06_10205 PF00444 Ribosomal protein L36 ABM06_10210 PF02224 Cytidylate kinase ABM06_10215 PF00575 S1 RNA binding domain ABM06_10220 PF00216 Bacterial DNA-binding protein ABM06_10230 PF18073 Rubredoxin metal binding domain ABM06_10235 PF00953 Glycosyl transferase family 4 ABM06_10240 PF02719 Polysaccharide biosynthesis protein ABM06_10245 PF00483 Nucleotidyl transferase ABM06_10250 PF00999 Sodium/hydrogen exchanger family ABM06_10250 PF02254 TrkA-N domain ABM06_10285 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ABM06_10285 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ABM06_10290 PF00478 IMP dehydrogenase / GMP reductase domain ABM06_10290 PF00571 CBS domain ABM06_10295 PF00958 GMP synthase C terminal domain ABM06_10295 PF00117 Glutamine amidotransferase class-I ABM06_10295 PF02540 NAD synthase ABM06_10300 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) ABM06_10305 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus ABM06_10305 PF00361 Proton-conducting membrane transporter ABM06_10305 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ABM06_10310 PF03466 LysR substrate binding domain ABM06_10310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABM06_10325 PF03601 Conserved hypothetical protein 698 ABM06_10330 PF03466 LysR substrate binding domain ABM06_10330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABM06_10350 PF01566 Natural resistance-associated macrophage protein ABM06_10355 PF02742 Iron dependent repressor, metal binding and dimerisation domain ABM06_10355 PF01325 Iron dependent repressor, N-terminal DNA binding domain ABM06_10360 PF14437 MafB19-like deaminase ABM06_10365 PF00929 Exonuclease ABM06_10370 PF05552 Conserved TM helix ABM06_10370 PF00924 Mechanosensitive ion channel ABM06_10375 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ABM06_10375 PF00391 PEP-utilising enzyme, mobile domain ABM06_10375 PF02896 PEP-utilising enzyme, TIM barrel domain ABM06_10380 PF03618 Kinase/pyrophosphorylase ABM06_10415 PF01066 CDP-alcohol phosphatidyltransferase ABM06_10425 PF00561 alpha/beta hydrolase fold ABM06_10440 PF01266 FAD dependent oxidoreductase ABM06_10440 PF00355 Rieske [2Fe-2S] domain ABM06_10450 PF09371 Tex-like protein N-terminal domain ABM06_10450 PF00575 S1 RNA binding domain ABM06_10450 PF17674 HHH domain ABM06_10450 PF16921 Tex protein YqgF-like domain ABM06_10460 PF00072 Response regulator receiver domain ABM06_10470 PF04551 GcpE protein ABM06_10475 PF01569 PAP2 superfamily ABM06_10480 PF07690 Major Facilitator Superfamily ABM06_10490 PF01177 Asp/Glu/Hydantoin racemase ABM06_10495 PF00892 EamA-like transporter family ABM06_10500 PF01565 FAD binding domain ABM06_10500 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ABM06_10505 PF01180 Dihydroorotate dehydrogenase ABM06_10520 PF00171 Aldehyde dehydrogenase family ABM06_10530 PF03073 TspO/MBR family ABM06_10535 PF13840 ACT domain ABM06_10535 PF01842 ACT domain ABM06_10535 PF00696 Amino acid kinase family ABM06_10535 PF00742 Homoserine dehydrogenase ABM06_10535 PF03447 Homoserine dehydrogenase, NAD binding domain ABM06_10540 PF00288 GHMP kinases N terminal domain ABM06_10540 PF08544 GHMP kinases C terminal ABM06_10555 PF00291 Pyridoxal-phosphate dependent enzyme ABM06_10555 PF14821 Threonine synthase N terminus ABM06_10570 PF13393 Histidyl-tRNA synthetase ABM06_10570 PF03129 Anticodon binding domain ABM06_10585 PF08029 HisG, C-terminal domain ABM06_10585 PF01634 ATP phosphoribosyltransferase ABM06_10590 PF00815 Histidinol dehydrogenase ABM06_10595 PF00155 Aminotransferase class I and II ABM06_10600 PF00475 Imidazoleglycerol-phosphate dehydratase ABM06_10605 PF00117 Glutamine amidotransferase class-I ABM06_10610 PF00977 Histidine biosynthesis protein ABM06_10615 PF00977 Histidine biosynthesis protein ABM06_10620 PF01502 Phosphoribosyl-AMP cyclohydrolase ABM06_10620 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ABM06_10630 PF03377 TAL effector repeat ABM06_10735 PF17091 Inovirus G7P protein ABM06_10805 PF02303 Helix-destabilising protein ABM06_10840 PF13340 Putative transposase of IS4/5 family (DUF4096) ABM06_10860 PF13340 Putative transposase of IS4/5 family (DUF4096) ABM06_10870 PF03377 TAL effector repeat ABM06_10885 PF03377 TAL effector repeat ABM06_10890 PF13340 Putative transposase of IS4/5 family (DUF4096) ABM06_10910 PF03377 TAL effector repeat ABM06_10940 PF01609 Transposase DDE domain ABM06_10940 PF05598 Transposase domain (DUF772) ABM06_10955 PF00872 Transposase, Mutator family ABM06_10965 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABM06_10985 PF01066 CDP-alcohol phosphatidyltransferase ABM06_10990 PF01541 GIY-YIG catalytic domain ABM06_10990 PF02151 UvrB/uvrC motif ABM06_10990 PF08459 UvrC Helix-hairpin-helix N-terminal ABM06_11000 PF01451 Low molecular weight phosphotyrosine protein phosphatase ABM06_11005 PF02348 Cytidylyltransferase ABM06_11010 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ABM06_11015 PF00664 ABC transporter transmembrane region ABM06_11015 PF00005 ABC transporter ABM06_11025 PF01618 MotA/TolQ/ExbB proton channel family ABM06_11030 PF00753 Metallo-beta-lactamase superfamily ABM06_11030 PF03772 Competence protein ABM06_11045 PF00005 ABC transporter ABM06_11050 PF02687 FtsX-like permease family ABM06_11050 PF12704 MacB-like periplasmic core domain ABM06_11060 PF03937 Flavinator of succinate dehydrogenase ABM06_11065 PF13085 2Fe-2S iron-sulfur cluster binding domain ABM06_11075 PF00890 FAD binding domain ABM06_11075 PF02910 Fumarate reductase flavoprotein C-term ABM06_11080 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ABM06_11085 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ABM06_11090 PF01571 Aminomethyltransferase folate-binding domain ABM06_11095 PF17912 MalK OB fold domain ABM06_11095 PF00005 ABC transporter ABM06_11100 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ABM06_11100 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ABM06_11105 PF02685 Glucokinase ABM06_11110 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ABM06_11115 PF00920 Dehydratase family ABM06_11120 PF01081 KDPG and KHG aldolase ABM06_11125 PF05598 Transposase domain (DUF772) ABM06_11155 PF00672 HAMP domain ABM06_11155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABM06_11155 PF00512 His Kinase A (phospho-acceptor) domain ABM06_11155 PF01627 Hpt domain ABM06_11155 PF00072 Response regulator receiver domain ABM06_11155 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ABM06_11165 PF13340 Putative transposase of IS4/5 family (DUF4096) ABM06_11185 PF00990 Diguanylate cyclase, GGDEF domain ABM06_11185 PF08448 PAS fold ABM06_11215 PF02253 Phospholipase A1 ABM06_11225 PF05683 Fumarase C-terminus ABM06_11225 PF05681 Fumarate hydratase (Fumerase) ABM06_11230 PF00005 ABC transporter ABM06_11235 PF00175 Oxidoreductase NAD-binding domain ABM06_11235 PF00970 Oxidoreductase FAD-binding domain ABM06_11240 PF00255 Glutathione peroxidase ABM06_11260 PF00082 Subtilase family ABM06_11265 PF08281 Sigma-70, region 4 ABM06_11265 PF04542 Sigma-70 region 2 ABM06_11275 PF12802 MarR family ABM06_11300 PF00854 POT family ABM06_11310 PF01915 Glycosyl hydrolase family 3 C-terminal domain ABM06_11310 PF14310 Fibronectin type III-like domain ABM06_11310 PF00933 Glycosyl hydrolase family 3 N terminal domain ABM06_11325 PF00563 EAL domain ABM06_11325 PF01590 GAF domain ABM06_11325 PF00360 Phytochrome region ABM06_11325 PF00990 Diguanylate cyclase, GGDEF domain ABM06_11330 PF00474 Sodium:solute symporter family ABM06_11335 PF01915 Glycosyl hydrolase family 3 C-terminal domain ABM06_11335 PF14310 Fibronectin type III-like domain ABM06_11335 PF00933 Glycosyl hydrolase family 3 N terminal domain ABM06_11355 PF00342 Phosphoglucose isomerase ABM06_11360 PF02261 Aspartate decarboxylase ABM06_11365 PF02569 Pantoate-beta-alanine ligase ABM06_11370 PF02548 Ketopantoate hydroxymethyltransferase ABM06_11375 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ABM06_11380 PF01743 Poly A polymerase head domain ABM06_11380 PF12627 Probable RNA and SrmB- binding site of polymerase A ABM06_11380 PF12626 Polymerase A arginine-rich C-terminus ABM06_11390 PF02649 Type I GTP cyclohydrolase folE2 ABM06_11395 PF01520 N-acetylmuramoyl-L-alanine amidase ABM06_11415 PF05598 Transposase domain (DUF772) ABM06_11420 PF00082 Subtilase family ABM06_11420 PF03797 Autotransporter beta-domain ABM06_11425 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABM06_11430 PF00873 AcrB/AcrD/AcrF family ABM06_11435 PF02321 Outer membrane efflux protein ABM06_11440 PF08448 PAS fold ABM06_11440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABM06_11440 PF00512 His Kinase A (phospho-acceptor) domain ABM06_11440 PF00072 Response regulator receiver domain ABM06_11440 PF13426 PAS domain ABM06_11445 PF00196 Bacterial regulatory proteins, luxR family ABM06_11445 PF00072 Response regulator receiver domain ABM06_11450 PF12951 Passenger-associated-transport-repeat ABM06_11455 PF01527 Transposase ABM06_11465 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ABM06_11470 PF01842 ACT domain ABM06_11470 PF01817 Chorismate mutase type II ABM06_11470 PF00800 Prephenate dehydratase ABM06_11475 PF00266 Aminotransferase class-V ABM06_11480 PF00174 Oxidoreductase molybdopterin binding domain ABM06_11490 PF01794 Ferric reductase like transmembrane component ABM06_11515 PF07702 UTRA domain ABM06_11515 PF00392 Bacterial regulatory proteins, gntR family ABM06_11525 PF07969 Amidohydrolase family ABM06_11530 PF00221 Aromatic amino acid lyase ABM06_11540 PF17391 Urocanase N-terminal domain ABM06_11540 PF01175 Urocanase Rossmann-like domain ABM06_11540 PF17392 Urocanase C-terminal domain ABM06_11555 PF13276 HTH-like domain ABM06_11560 PF01527 Transposase ABM06_11565 PF00521 DNA gyrase/topoisomerase IV, subunit A ABM06_11565 PF03989 DNA gyrase C-terminal domain, beta-propeller ABM06_11570 PF01008 Initiation factor 2 subunit family ABM06_11580 PF00152 tRNA synthetases class II (D, K and N) ABM06_11585 PF01653 NAD-dependent DNA ligase adenylation domain ABM06_11585 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ABM06_11585 PF00533 BRCA1 C Terminus (BRCT) domain ABM06_11585 PF12826 Helix-hairpin-helix motif ABM06_11585 PF03120 NAD-dependent DNA ligase OB-fold domain ABM06_11595 PF04354 ZipA, C-terminal FtsZ-binding domain ABM06_11600 PF02463 RecF/RecN/SMC N terminal domain ABM06_11605 PF01281 Ribosomal protein L9, N-terminal domain ABM06_11605 PF03948 Ribosomal protein L9, C-terminal domain ABM06_11610 PF01084 Ribosomal protein S18 ABM06_11615 PF01250 Ribosomal protein S6 ABM06_11620 PF01521 Iron-sulphur cluster biosynthesis ABM06_11625 PF00152 tRNA synthetases class II (D, K and N) ABM06_11625 PF01336 OB-fold nucleic acid binding domain ABM06_11655 PF00484 Carbonic anhydrase ABM06_11660 PF06052 3-hydroxyanthranilic acid dioxygenase ABM06_11670 PF00266 Aminotransferase class-V ABM06_11675 PF01494 FAD binding domain ABM06_11680 PF08411 Exonuclease C-terminal ABM06_11680 PF00929 Exonuclease ABM06_11690 PF00248 Aldo/keto reductase family ABM06_11705 PF01513 ATP-NAD kinase ABM06_11710 PF01170 Putative RNA methylase family UPF0020 ABM06_11710 PF10672 S-adenosylmethionine-dependent methyltransferase ABM06_11710 PF02926 THUMP domain ABM06_11715 PF12848 ABC transporter ABM06_11715 PF00005 ABC transporter ABM06_11720 PF00005 ABC transporter ABM06_11725 PF00005 ABC transporter ABM06_11755 PF00581 Rhodanese-like domain ABM06_11760 PF00293 NUDIX domain ABM06_11765 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABM06_11765 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ABM06_11770 PF00378 Enoyl-CoA hydratase/isomerase ABM06_11780 PF10576 Iron-sulfur binding domain of endonuclease III ABM06_11780 PF00633 Helix-hairpin-helix motif ABM06_11780 PF00730 HhH-GPD superfamily base excision DNA repair protein ABM06_11790 PF00484 Carbonic anhydrase ABM06_11795 PF05598 Transposase domain (DUF772) ABM06_11795 PF01609 Transposase DDE domain ABM06_11810 PF13340 Putative transposase of IS4/5 family (DUF4096) ABM06_11825 PF12849 PBP superfamily domain ABM06_11830 PF12849 PBP superfamily domain ABM06_11835 PF00528 Binding-protein-dependent transport system inner membrane component ABM06_11840 PF00528 Binding-protein-dependent transport system inner membrane component ABM06_11845 PF00005 ABC transporter ABM06_11850 PF01895 PhoU domain ABM06_11860 PF00929 Exonuclease ABM06_11875 PF00872 Transposase, Mutator family ABM06_11900 PF13495 Phage integrase, N-terminal SAM-like domain ABM06_11900 PF00589 Phage integrase family ABM06_11905 PF02355 Protein export membrane protein ABM06_11905 PF07549 SecD/SecF GG Motif ABM06_11910 PF02355 Protein export membrane protein ABM06_11910 PF13721 SecD export protein N-terminal TM region ABM06_11910 PF07549 SecD/SecF GG Motif ABM06_11915 PF02699 Preprotein translocase subunit ABM06_11920 PF01702 Queuine tRNA-ribosyltransferase ABM06_11925 PF02547 Queuosine biosynthesis protein ABM06_11960 PF05598 Transposase domain (DUF772) ABM06_11990 PF13340 Putative transposase of IS4/5 family (DUF4096) ABM06_12010 PF00037 4Fe-4S binding domain ABM06_12025 PF01467 Cytidylyltransferase-like ABM06_12035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABM06_12035 PF00183 Hsp90 protein ABM06_12055 PF00899 ThiF family ABM06_12070 PF05598 Transposase domain (DUF772) ABM06_12090 PF00665 Integrase core domain ABM06_12090 PF13936 Helix-turn-helix domain ABM06_12095 PF01609 Transposase DDE domain ABM06_12095 PF05598 Transposase domain (DUF772) ABM06_12120 PF03454 MoeA C-terminal region (domain IV) ABM06_12120 PF00994 Probable molybdopterin binding domain ABM06_12120 PF03453 MoeA N-terminal region (domain I and II) ABM06_12125 PF01926 50S ribosome-binding GTPase ABM06_12125 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ABM06_12130 PF01011 PQQ enzyme repeat ABM06_12130 PF13360 PQQ-like domain ABM06_12140 PF13464 Domain of unknown function (DUF4115) ABM06_12150 PF04055 Radical SAM superfamily ABM06_12155 PF00334 Nucleoside diphosphate kinase ABM06_12165 PF00378 Enoyl-CoA hydratase/isomerase ABM06_12165 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABM06_12165 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABM06_12170 PF00108 Thiolase, N-terminal domain ABM06_12170 PF02803 Thiolase, C-terminal domain ABM06_12175 PF00654 Voltage gated chloride channel ABM06_12185 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ABM06_12195 PF12002 MgsA AAA+ ATPase C terminal ABM06_12195 PF00004 ATPase family associated with various cellular activities (AAA) ABM06_12195 PF16193 AAA C-terminal domain ABM06_12205 PF03548 Outer membrane lipoprotein carrier protein LolA ABM06_12215 PF17854 FtsK alpha domain ABM06_12215 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ABM06_12215 PF01580 FtsK/SpoIIIE family ABM06_12215 PF09397 Ftsk gamma domain ABM06_12220 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABM06_12240 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ABM06_12245 PF01176 Translation initiation factor 1A / IF-1 ABM06_12250 PF10431 C-terminal, D2-small domain, of ClpB protein ABM06_12250 PF07724 AAA domain (Cdc48 subfamily) ABM06_12250 PF02861 Clp amino terminal domain, pathogenicity island component ABM06_12250 PF00004 ATPase family associated with various cellular activities (AAA) ABM06_12250 PF17871 AAA lid domain ABM06_12255 PF02617 ATP-dependent Clp protease adaptor protein ClpS ABM06_12260 PF00293 NUDIX domain ABM06_12270 PF04356 Protein of unknown function (DUF489) ABM06_12275 PF00672 HAMP domain ABM06_12275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABM06_12275 PF12729 Four helix bundle sensory module for signal transduction ABM06_12290 PF00563 EAL domain ABM06_12290 PF08447 PAS fold ABM06_12290 PF08448 PAS fold ABM06_12290 PF00990 Diguanylate cyclase, GGDEF domain ABM06_12295 PF07730 Histidine kinase ABM06_12295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABM06_12300 PF00990 Diguanylate cyclase, GGDEF domain ABM06_12300 PF00563 EAL domain ABM06_12300 PF03707 Bacterial signalling protein N terminal repeat ABM06_12305 PF13426 PAS domain ABM06_12305 PF13188 PAS domain ABM06_12305 PF00512 His Kinase A (phospho-acceptor) domain ABM06_12305 PF00989 PAS fold ABM06_12305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABM06_12325 PF01584 CheW-like domain ABM06_12325 PF00072 Response regulator receiver domain ABM06_12335 PF00460 Flagella basal body rod protein ABM06_12335 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ABM06_12340 PF03963 Flagellar hook capping protein - N-terminal region ABM06_12345 PF00460 Flagella basal body rod protein ABM06_12345 PF07559 Flagellar basal body protein FlaE ABM06_12345 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ABM06_12350 PF00460 Flagella basal body rod protein ABM06_12350 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ABM06_12355 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ABM06_12355 PF00460 Flagella basal body rod protein ABM06_12360 PF02107 Flagellar L-ring protein ABM06_12365 PF02119 Flagellar P-ring protein ABM06_12370 PF10135 Rod binding protein ABM06_12370 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ABM06_12375 PF07196 Flagellin hook IN motif ABM06_12375 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ABM06_12385 PF00669 Bacterial flagellin N-terminal helical region ABM06_12385 PF00700 Bacterial flagellin C-terminal helical region ABM06_12390 PF07196 Flagellin hook IN motif ABM06_12390 PF07195 Flagellar hook-associated protein 2 C-terminus ABM06_12390 PF02465 Flagellar hook-associated protein 2 N-terminus ABM06_12395 PF02561 Flagellar protein FliS ABM06_12410 PF00196 Bacterial regulatory proteins, luxR family ABM06_12410 PF00072 Response regulator receiver domain ABM06_12415 PF04552 Sigma-54, DNA binding domain ABM06_12415 PF00309 Sigma-54 factor, Activator interacting domain (AID) ABM06_12415 PF04963 Sigma-54 factor, core binding domain ABM06_12420 PF00072 Response regulator receiver domain ABM06_12420 PF01339 CheB methylesterase ABM06_12425 PF00158 Sigma-54 interaction domain ABM06_12425 PF00072 Response regulator receiver domain ABM06_12425 PF02954 Bacterial regulatory protein, Fis family ABM06_12430 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ABM06_12440 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ABM06_12440 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ABM06_12475 PF00534 Glycosyl transferases group 1 ABM06_12475 PF00535 Glycosyl transferase family 2 ABM06_12480 PF02049 Flagellar hook-basal body complex protein FliE ABM06_12485 PF08345 Flagellar M-ring protein C-terminal ABM06_12485 PF01514 Secretory protein of YscJ/FliF family ABM06_12490 PF01706 FliG C-terminal domain ABM06_12490 PF14842 FliG N-terminal domain ABM06_12490 PF14841 FliG middle domain ABM06_12500 PF18269 T3SS EscN ATPase C-terminal domain ABM06_12500 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABM06_12520 PF02154 Flagellar motor switch protein FliM ABM06_12520 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ABM06_12525 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ABM06_12530 PF04347 Flagellar biosynthesis protein, FliO ABM06_12535 PF00813 FliP family ABM06_12540 PF01313 Bacterial export proteins, family 3 ABM06_12545 PF01311 Bacterial export proteins, family 1 ABM06_12550 PF00563 EAL domain ABM06_12550 PF00990 Diguanylate cyclase, GGDEF domain ABM06_12550 PF03707 Bacterial signalling protein N terminal repeat ABM06_12550 PF13188 PAS domain ABM06_12555 PF03707 Bacterial signalling protein N terminal repeat ABM06_12555 PF00563 EAL domain ABM06_12555 PF13188 PAS domain ABM06_12555 PF00990 Diguanylate cyclase, GGDEF domain ABM06_12560 PF03707 Bacterial signalling protein N terminal repeat ABM06_12560 PF00563 EAL domain ABM06_12560 PF00990 Diguanylate cyclase, GGDEF domain ABM06_12565 PF01312 FlhB HrpN YscU SpaS Family ABM06_12570 PF00771 FHIPEP family ABM06_12575 PF00448 SRP54-type protein, GTPase domain ABM06_12580 PF10609 NUBPL iron-transfer P-loop NTPase ABM06_12585 PF04542 Sigma-70 region 2 ABM06_12585 PF04545 Sigma-70, region 4 ABM06_12585 PF04539 Sigma-70 region 3 ABM06_12590 PF00072 Response regulator receiver domain ABM06_12595 PF04344 Chemotaxis phosphatase, CheZ ABM06_12600 PF01627 Hpt domain ABM06_12600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABM06_12600 PF01584 CheW-like domain ABM06_12600 PF07194 P2 response regulator binding domain ABM06_12600 PF02895 Signal transducing histidine kinase, homodimeric domain ABM06_12615 PF00665 Integrase core domain ABM06_12615 PF13936 Helix-turn-helix domain ABM06_12630 PF01609 Transposase DDE domain ABM06_12630 PF05598 Transposase domain (DUF772) ABM06_12635 PF03527 RHS protein ABM06_12635 PF05593 RHS Repeat ABM06_12645 PF05598 Transposase domain (DUF772) ABM06_12645 PF01609 Transposase DDE domain ABM06_12665 PF00873 AcrB/AcrD/AcrF family ABM06_12670 PF00873 AcrB/AcrD/AcrF family ABM06_12690 PF00034 Cytochrome c ABM06_12740 PF00005 ABC transporter ABM06_12740 PF00664 ABC transporter transmembrane region ABM06_12745 PF00005 ABC transporter ABM06_12745 PF00664 ABC transporter transmembrane region ABM06_12750 PF01654 Cytochrome bd terminal oxidase subunit I ABM06_12765 PF01654 Cytochrome bd terminal oxidase subunit I ABM06_12775 PF02322 Cytochrome bd terminal oxidase subunit II ABM06_12795 PF02129 X-Pro dipeptidyl-peptidase (S15 family) ABM06_12795 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain ABM06_12800 PF00171 Aldehyde dehydrogenase family ABM06_12805 PF00696 Amino acid kinase family ABM06_12805 PF01472 PUA domain ABM06_12820 PF00206 Lyase ABM06_12825 PF01118 Semialdehyde dehydrogenase, NAD binding domain ABM06_12835 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase ABM06_12835 PF00696 Amino acid kinase family ABM06_12840 PF01546 Peptidase family M20/M25/M40 ABM06_12840 PF07687 Peptidase dimerisation domain ABM06_12850 PF00764 Arginosuccinate synthase ABM06_12855 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ABM06_12855 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ABM06_12865 PF09190 DALR domain ABM06_12865 PF01406 tRNA synthetases class I (C) catalytic domain ABM06_12870 PF02657 Fe-S metabolism associated domain ABM06_12885 PF01258 Prokaryotic dksA/traR C4-type zinc finger ABM06_12895 PF01809 Putative membrane protein insertion efficiency factor ABM06_12900 PF01979 Amidohydrolase family ABM06_12905 PF01551 Peptidase family M23 ABM06_12905 PF08460 Bacterial SH3 domain ABM06_12910 PF05985 Ethanolamine ammonia-lyase light chain (EutC) ABM06_12950 PF05598 Transposase domain (DUF772) ABM06_12950 PF01609 Transposase DDE domain ABM06_12960 PF01095 Pectinesterase ABM06_12980 PF00295 Glycosyl hydrolases family 28 ABM06_12990 PF13419 Haloacid dehalogenase-like hydrolase ABM06_13000 PF01979 Amidohydrolase family ABM06_13010 PF01132 Elongation factor P (EF-P) OB domain ABM06_13010 PF08207 Elongation factor P (EF-P) KOW-like domain ABM06_13010 PF09285 Elongation factor P, C-terminal ABM06_13015 PF04055 Radical SAM superfamily ABM06_13020 PF03707 Bacterial signalling protein N terminal repeat ABM06_13020 PF00563 EAL domain ABM06_13020 PF00990 Diguanylate cyclase, GGDEF domain ABM06_13020 PF13188 PAS domain ABM06_13030 PF00588 SpoU rRNA Methylase family ABM06_13035 PF00459 Inositol monophosphatase family ABM06_13040 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ABM06_13040 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ABM06_13045 PF00545 ribonuclease ABM06_13065 PF00270 DEAD/DEAH box helicase ABM06_13065 PF03880 DbpA RNA binding domain ABM06_13065 PF00271 Helicase conserved C-terminal domain ABM06_13070 PF00156 Phosphoribosyl transferase domain ABM06_13075 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ABM06_13085 PF14497 Glutathione S-transferase, C-terminal domain ABM06_13085 PF02798 Glutathione S-transferase, N-terminal domain ABM06_13090 PF00313 'Cold-shock' DNA-binding domain ABM06_13095 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 ABM06_13100 PF07152 YaeQ protein ABM06_13110 PF00072 Response regulator receiver domain ABM06_13110 PF00990 Diguanylate cyclase, GGDEF domain ABM06_13110 PF00563 EAL domain ABM06_13115 PF01435 Peptidase family M48 ABM06_13120 PF00749 tRNA synthetases class I (E and Q), catalytic domain ABM06_13125 PF00106 short chain dehydrogenase ABM06_13130 PF07879 PHB/PHA accumulation regulator DNA-binding domain ABM06_13130 PF05233 PHB accumulation regulatory domain ABM06_13145 PF08676 MutL C terminal dimerisation domain ABM06_13145 PF01119 DNA mismatch repair protein, C-terminal domain ABM06_13150 PF01520 N-acetylmuramoyl-L-alanine amidase ABM06_13150 PF11741 AMIN domain ABM06_13155 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ABM06_13160 PF01256 Carbohydrate kinase ABM06_13160 PF03853 YjeF-related protein N-terminus ABM06_13165 PF08331 Domain of unknown function (DUF1730) ABM06_13180 PF13742 OB-fold nucleic acid binding domain ABM06_13180 PF02601 Exonuclease VII, large subunit ABM06_13200 PF00295 Glycosyl hydrolases family 28 ABM06_13210 PF13419 Haloacid dehalogenase-like hydrolase ABM06_13220 PF01979 Amidohydrolase family ABM06_13230 PF01132 Elongation factor P (EF-P) OB domain ABM06_13230 PF08207 Elongation factor P (EF-P) KOW-like domain ABM06_13230 PF09285 Elongation factor P, C-terminal ABM06_13235 PF04055 Radical SAM superfamily ABM06_13240 PF13188 PAS domain ABM06_13240 PF00563 EAL domain ABM06_13240 PF00990 Diguanylate cyclase, GGDEF domain ABM06_13240 PF03707 Bacterial signalling protein N terminal repeat ABM06_13250 PF00588 SpoU rRNA Methylase family ABM06_13255 PF00459 Inositol monophosphatase family ABM06_13260 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ABM06_13260 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ABM06_13265 PF00545 ribonuclease ABM06_13285 PF00270 DEAD/DEAH box helicase ABM06_13285 PF03880 DbpA RNA binding domain ABM06_13285 PF00271 Helicase conserved C-terminal domain ABM06_13290 PF00156 Phosphoribosyl transferase domain ABM06_13295 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ABM06_13305 PF14497 Glutathione S-transferase, C-terminal domain ABM06_13305 PF02798 Glutathione S-transferase, N-terminal domain ABM06_13310 PF00313 'Cold-shock' DNA-binding domain ABM06_13315 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 ABM06_13320 PF07152 YaeQ protein ABM06_13330 PF00563 EAL domain ABM06_13330 PF00990 Diguanylate cyclase, GGDEF domain ABM06_13330 PF00072 Response regulator receiver domain ABM06_13335 PF01435 Peptidase family M48 ABM06_13340 PF00749 tRNA synthetases class I (E and Q), catalytic domain ABM06_13345 PF00106 short chain dehydrogenase ABM06_13350 PF05233 PHB accumulation regulatory domain ABM06_13350 PF07879 PHB/PHA accumulation regulator DNA-binding domain ABM06_13365 PF01119 DNA mismatch repair protein, C-terminal domain ABM06_13365 PF08676 MutL C terminal dimerisation domain ABM06_13370 PF11741 AMIN domain ABM06_13370 PF01520 N-acetylmuramoyl-L-alanine amidase ABM06_13375 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ABM06_13380 PF03853 YjeF-related protein N-terminus ABM06_13380 PF01256 Carbohydrate kinase ABM06_13385 PF08331 Domain of unknown function (DUF1730) ABM06_13400 PF02601 Exonuclease VII, large subunit ABM06_13400 PF13742 OB-fold nucleic acid binding domain ABM06_13415 PF03781 Sulfatase-modifying factor enzyme 1 ABM06_13420 PF00570 HRDC domain ABM06_13420 PF01612 3'-5' exonuclease ABM06_13460 PF14850 DNA-binding domain of Proline dehydrogenase ABM06_13460 PF18327 Proline utilization A proline dehydrogenase N-terminal domain ABM06_13460 PF01619 Proline dehydrogenase ABM06_13460 PF00171 Aldehyde dehydrogenase family ABM06_13465 PF00872 Transposase, Mutator family ABM06_13495 PF04386 Stringent starvation protein B ABM06_13500 PF00043 Glutathione S-transferase, C-terminal domain ABM06_13500 PF02798 Glutathione S-transferase, N-terminal domain ABM06_13505 PF02167 Cytochrome C1 family ABM06_13510 PF00032 Cytochrome b(C-terminal)/b6/petD ABM06_13510 PF00033 Cytochrome b/b6/petB ABM06_13515 PF00355 Rieske [2Fe-2S] domain ABM06_13515 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal ABM06_13520 PF01464 Transglycosylase SLT domain ABM06_13540 PF00919 Uncharacterized protein family UPF0004 ABM06_13540 PF04055 Radical SAM superfamily ABM06_13540 PF01938 TRAM domain ABM06_13545 PF02562 PhoH-like protein ABM06_13555 PF02130 Uncharacterized protein family UPF0054 ABM06_13565 PF03471 Transporter associated domain ABM06_13565 PF00571 CBS domain ABM06_13580 PF00171 Aldehyde dehydrogenase family ABM06_13590 PF00528 Binding-protein-dependent transport system inner membrane component ABM06_13605 PF02321 Outer membrane efflux protein ABM06_13610 PF07690 Major Facilitator Superfamily ABM06_13615 PF13533 Biotin-lipoyl like ABM06_13625 PF00120 Glutamine synthetase, catalytic domain ABM06_13635 PF00120 Glutamine synthetase, catalytic domain ABM06_13640 PF01266 FAD dependent oxidoreductase ABM06_13645 PF00990 Diguanylate cyclase, GGDEF domain ABM06_13645 PF00072 Response regulator receiver domain ABM06_13650 PF00083 Sugar (and other) transporter ABM06_13650 PF07690 Major Facilitator Superfamily ABM06_13660 PF00384 Molybdopterin oxidoreductase ABM06_13665 PF02634 FdhD/NarQ family ABM06_13670 PF07690 Major Facilitator Superfamily ABM06_13675 PF13340 Putative transposase of IS4/5 family (DUF4096) ABM06_13685 PF00202 Aminotransferase class-III ABM06_13690 PF00005 ABC transporter ABM06_13700 PF04286 Protein of unknown function (DUF445) ABM06_13705 PF00672 HAMP domain ABM06_13705 PF00072 Response regulator receiver domain ABM06_13705 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ABM06_13705 PF00512 His Kinase A (phospho-acceptor) domain ABM06_13705 PF01627 Hpt domain ABM06_13705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABM06_13710 PF00072 Response regulator receiver domain ABM06_13715 PF01609 Transposase DDE domain ABM06_13715 PF05598 Transposase domain (DUF772) ABM06_13720 PF05088 Bacterial NAD-glutamate dehydrogenase ABM06_13730 PF00529 HlyD membrane-fusion protein of T1SS ABM06_13730 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABM06_13735 PF00873 AcrB/AcrD/AcrF family ABM06_13750 PF01609 Transposase DDE domain ABM06_13750 PF13006 Insertion element 4 transposase N-terminal ABM06_13755 PF00356 Bacterial regulatory proteins, lacI family ABM06_13760 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ABM06_13760 PF00381 PTS HPr component phosphorylation site ABM06_13760 PF02896 PEP-utilising enzyme, TIM barrel domain ABM06_13760 PF00391 PEP-utilising enzyme, mobile domain ABM06_13760 PF05524 PEP-utilising enzyme, N-terminal ABM06_13765 PF00294 pfkB family carbohydrate kinase ABM06_13770 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ABM06_13785 PF05598 Transposase domain (DUF772) ABM06_13785 PF01609 Transposase DDE domain ABM06_13830 PF04717 Type VI secretion system, phage-baseplate injector ABM06_13830 PF16671 Actin cross-linking domain ABM06_13840 PF00665 Integrase core domain ABM06_13840 PF13333 Integrase core domain ABM06_13840 PF13276 HTH-like domain ABM06_13850 PF16671 Actin cross-linking domain ABM06_13850 PF04717 Type VI secretion system, phage-baseplate injector ABM06_13885 PF05598 Transposase domain (DUF772) ABM06_13885 PF01609 Transposase DDE domain ABM06_13915 PF00593 TonB dependent receptor ABM06_13915 PF07715 TonB-dependent Receptor Plug Domain ABM06_13925 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ABM06_13925 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ABM06_13945 PF01618 MotA/TolQ/ExbB proton channel family ABM06_13950 PF00691 OmpA family ABM06_13950 PF13677 Membrane MotB of proton-channel complex MotA/MotB ABM06_13955 PF13614 AAA domain ABM06_13960 PF01584 CheW-like domain ABM06_13970 PF00072 Response regulator receiver domain ABM06_13975 PF01627 Hpt domain ABM06_13975 PF01584 CheW-like domain ABM06_13975 PF09078 CheY binding ABM06_13975 PF02895 Signal transducing histidine kinase, homodimeric domain ABM06_13975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABM06_14000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABM06_14000 PF02203 Tar ligand binding domain homologue ABM06_14000 PF00672 HAMP domain ABM06_14015 PF02203 Tar ligand binding domain homologue ABM06_14015 PF00672 HAMP domain ABM06_14015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABM06_14020 PF02203 Tar ligand binding domain homologue ABM06_14020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABM06_14020 PF00672 HAMP domain ABM06_14025 PF02203 Tar ligand binding domain homologue ABM06_14025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABM06_14025 PF00672 HAMP domain ABM06_14030 PF00672 HAMP domain ABM06_14030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABM06_14030 PF02203 Tar ligand binding domain homologue ABM06_14035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABM06_14035 PF00672 HAMP domain ABM06_14035 PF02203 Tar ligand binding domain homologue ABM06_14040 PF07317 Flagellar regulator YcgR ABM06_14040 PF07238 PilZ domain ABM06_14045 PF01584 CheW-like domain ABM06_14065 PF00672 HAMP domain ABM06_14065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABM06_14065 PF02203 Tar ligand binding domain homologue ABM06_14070 PF01739 CheR methyltransferase, SAM binding domain ABM06_14070 PF03705 CheR methyltransferase, all-alpha domain ABM06_14075 PF03975 CheD chemotactic sensory transduction ABM06_14080 PF00072 Response regulator receiver domain ABM06_14080 PF01339 CheB methylesterase ABM06_14085 PF03707 Bacterial signalling protein N terminal repeat ABM06_14085 PF00990 Diguanylate cyclase, GGDEF domain ABM06_14085 PF00563 EAL domain ABM06_14090 PF00561 alpha/beta hydrolase fold ABM06_14095 PF11791 Aconitate B N-terminal domain ABM06_14095 PF00330 Aconitase family (aconitate hydratase) ABM06_14095 PF06434 Aconitate hydratase 2 N-terminus ABM06_14110 PF00694 Aconitase C-terminal domain ABM06_14110 PF00330 Aconitase family (aconitate hydratase) ABM06_14120 PF13193 AMP-binding enzyme C-terminal domain ABM06_14120 PF00501 AMP-binding enzyme ABM06_14125 PF00378 Enoyl-CoA hydratase/isomerase ABM06_14130 PF01627 Hpt domain ABM06_14130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABM06_14130 PF00072 Response regulator receiver domain ABM06_14130 PF00512 His Kinase A (phospho-acceptor) domain ABM06_14140 PF00072 Response regulator receiver domain ABM06_14145 PF00152 tRNA synthetases class II (D, K and N) ABM06_14145 PF01336 OB-fold nucleic acid binding domain ABM06_14150 PF03462 PCRF domain ABM06_14150 PF00472 RF-1 domain ABM06_14165 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 ABM06_14165 PF13542 Helix-turn-helix domain of transposase family ISL3 ABM06_14165 PF01610 Transposase ABM06_14180 PF17768 RecJ OB domain ABM06_14180 PF02272 DHHA1 domain ABM06_14180 PF01368 DHH family ABM06_14190 PF01272 Transcription elongation factor, GreA/GreB, C-term ABM06_14190 PF03449 Transcription elongation factor, N-terminal ABM06_14195 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ABM06_14195 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABM06_14195 PF02142 MGS-like domain ABM06_14205 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ABM06_14205 PF00117 Glutamine amidotransferase class-I ABM06_14210 PF05173 Dihydrodipicolinate reductase, C-terminus ABM06_14210 PF01113 Dihydrodipicolinate reductase, N-terminus ABM06_14225 PF03473 MOSC domain ABM06_14225 PF03475 3-alpha domain ABM06_14230 PF00155 Aminotransferase class I and II ABM06_14250 PF07670 Nucleoside recognition ABM06_14250 PF07664 Ferrous iron transport protein B C terminus ABM06_14250 PF02421 Ferrous iron transport protein B ABM06_14260 PF00378 Enoyl-CoA hydratase/isomerase ABM06_14270 PF00682 HMGL-like ABM06_14275 PF00106 short chain dehydrogenase ABM06_14280 PF01132 Elongation factor P (EF-P) OB domain ABM06_14280 PF08207 Elongation factor P (EF-P) KOW-like domain ABM06_14280 PF09285 Elongation factor P, C-terminal ABM06_14295 PF13936 Helix-turn-helix domain ABM06_14295 PF00665 Integrase core domain ABM06_14305 PF00083 Sugar (and other) transporter ABM06_14315 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ABM06_14315 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ABM06_14330 PF17137 Domain of unknown function (DUF5110) ABM06_14330 PF01055 Glycosyl hydrolases family 31 ABM06_14330 PF16338 Domain of unknown function (DUF4968) ABM06_14340 PF03466 LysR substrate binding domain ABM06_14340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABM06_14345 PF01081 KDPG and KHG aldolase ABM06_14350 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ABM06_14350 PF13378 Enolase C-terminal domain-like ABM06_14355 PF08450 SMP-30/Gluconolactonase/LRE-like region ABM06_14360 PF05035 2-keto-3-deoxy-galactonokinase ABM06_14365 PF11953 Domain of unknown function (DUF3470) ABM06_14365 PF00037 4Fe-4S binding domain ABM06_14375 PF00701 Dihydrodipicolinate synthetase family ABM06_14390 PF00578 AhpC/TSA family ABM06_14395 PF13638 PIN domain ABM06_14395 PF02562 PhoH-like protein ABM06_14405 PF08543 Phosphomethylpyrimidine kinase ABM06_14435 PF03466 LysR substrate binding domain ABM06_14435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABM06_14440 PF17954 Quercetinase C-terminal cupin domain ABM06_14440 PF02678 Pirin ABM06_14465 PF03796 DnaB-like helicase C terminal domain ABM06_14465 PF00772 DnaB-like helicase N terminal domain ABM06_14485 PF02599 Global regulator protein family ABM06_14490 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ABM06_14490 PF01411 tRNA synthetases class II (A) ABM06_14490 PF02272 DHHA1 domain ABM06_14495 PF02631 RecX family ABM06_14500 PF00154 recA bacterial DNA recombination protein ABM06_14505 PF01726 LexA DNA binding domain ABM06_14505 PF00717 Peptidase S24-like ABM06_14510 PF03109 ABC1 family ABM06_14515 PF02464 Competence-damaged protein ABM06_14520 PF01926 50S ribosome-binding GTPase ABM06_14520 PF13167 GTP-binding GTPase N-terminal ABM06_14520 PF16360 GTP-binding GTPase Middle Region ABM06_14525 PF17209 Hfq protein ABM06_14535 PF00809 Pterin binding enzyme ABM06_14540 PF17862 AAA+ lid domain ABM06_14540 PF00004 ATPase family associated with various cellular activities (AAA) ABM06_14540 PF06480 FtsH Extracellular ABM06_14540 PF01434 Peptidase family M41 ABM06_14545 PF01728 FtsJ-like methyltransferase ABM06_14550 PF01985 CRS1 / YhbY (CRM) domain ABM06_14560 PF01551 Peptidase family M23 ABM06_14560 PF01476 LysM domain ABM06_14565 PF09335 SNARE associated Golgi protein ABM06_14575 PF01975 Survival protein SurE ABM06_14580 PF01713 Smr domain ABM06_14585 PF01142 tRNA pseudouridine synthase D (TruD) ABM06_14590 PF02542 YgbB family ABM06_14595 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ABM06_14600 PF04977 Septum formation initiator ABM06_14605 PF00113 Enolase, C-terminal TIM barrel domain ABM06_14605 PF03952 Enolase, N-terminal domain ABM06_14615 PF00793 DAHP synthetase I family ABM06_14620 PF00117 Glutamine amidotransferase class-I ABM06_14620 PF06418 CTP synthase N-terminus ABM06_14630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABM06_14630 PF00204 DNA gyrase B ABM06_14630 PF01751 Toprim domain ABM06_14630 PF00986 DNA gyrase B subunit, carboxyl terminus ABM06_14650 PF02698 DUF218 domain ABM06_14655 PF01384 Phosphate transporter family ABM06_14665 PF00571 CBS domain ABM06_14665 PF03471 Transporter associated domain ABM06_14665 PF01595 Cyclin M transmembrane N-terminal domain ABM06_14680 PF00296 Luciferase-like monooxygenase ABM06_14685 PF07690 Major Facilitator Superfamily ABM06_14690 PF00005 ABC transporter ABM06_14690 PF00664 ABC transporter transmembrane region ABM06_14695 PF00005 ABC transporter ABM06_14715 PF00534 Glycosyl transferases group 1 ABM06_14715 PF13579 Glycosyl transferase 4-like domain ABM06_14735 PF08241 Methyltransferase domain ABM06_14750 PF01501 Glycosyl transferase family 8 ABM06_14750 PF00535 Glycosyl transferase family 2 ABM06_14755 PF01943 Polysaccharide biosynthesis protein ABM06_14760 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ABM06_14780 PF05523 WxcM-like, C-terminal ABM06_14795 PF00034 Cytochrome c ABM06_14805 PF08281 Sigma-70, region 4 ABM06_14805 PF04542 Sigma-70 region 2 ABM06_14815 PF00082 Subtilase family ABM06_14820 PF01578 Cytochrome C assembly protein ABM06_14825 PF04995 Heme exporter protein D (CcmD) ABM06_14830 PF03100 CcmE ABM06_14835 PF01578 Cytochrome C assembly protein ABM06_14835 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal ABM06_14840 PF08534 Redoxin ABM06_14845 PF03918 Cytochrome C biogenesis protein ABM06_14855 PF03377 TAL effector repeat ABM06_14870 PF03377 TAL effector repeat ABM06_14885 PF03377 TAL effector repeat ABM06_14890 PF00873 AcrB/AcrD/AcrF family ABM06_14900 PF00873 AcrB/AcrD/AcrF family ABM06_14905 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABM06_14905 PF00529 HlyD membrane-fusion protein of T1SS ABM06_14935 PF01527 Transposase ABM06_14940 PF13276 HTH-like domain ABM06_14950 PF13700 Domain of unknown function (DUF4158) ABM06_14950 PF01526 Tn3 transposase DDE domain ABM06_14955 PF00072 Response regulator receiver domain ABM06_14955 PF00486 Transcriptional regulatory protein, C terminal ABM06_14960 PF03150 Di-haem cytochrome c peroxidase ABM06_14960 PF00034 Cytochrome c ABM06_14965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABM06_14965 PF00512 His Kinase A (phospho-acceptor) domain ABM06_14970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABM06_14970 PF03466 LysR substrate binding domain ABM06_15000 PF00069 Protein kinase domain ABM06_15040 PF16671 Actin cross-linking domain ABM06_15040 PF04717 Type VI secretion system, phage-baseplate injector ABM06_15050 PF01609 Transposase DDE domain ABM06_15050 PF05598 Transposase domain (DUF772) ABM06_15060 PF17871 AAA lid domain ABM06_15060 PF07724 AAA domain (Cdc48 subfamily) ABM06_15060 PF00004 ATPase family associated with various cellular activities (AAA) ABM06_15060 PF10431 C-terminal, D2-small domain, of ClpB protein ABM06_15085 PF05638 Type VI secretion system effector, Hcp ABM06_15105 PF01609 Transposase DDE domain ABM06_15105 PF05598 Transposase domain (DUF772) ABM06_15125 PF01609 Transposase DDE domain ABM06_15125 PF05598 Transposase domain (DUF772) ABM06_15160 PF05598 Transposase domain (DUF772) ABM06_15160 PF01609 Transposase DDE domain ABM06_15170 PF13276 HTH-like domain ABM06_15170 PF13683 Integrase core domain ABM06_15180 PF01106 NifU-like domain ABM06_15185 PF01329 Pterin 4 alpha carbinolamine dehydratase ABM06_15195 PF02535 ZIP Zinc transporter ABM06_15200 PF02535 ZIP Zinc transporter ABM06_15205 PF11737 Protein of unknown function (DUF3300) ABM06_15210 PF00849 RNA pseudouridylate synthase ABM06_15210 PF01479 S4 domain ABM06_15215 PF00575 S1 RNA binding domain ABM06_15215 PF10150 Ribonuclease E/G family ABM06_15215 PF12111 Polyribonucleotide phosphorylase C terminal ABM06_15225 PF13340 Putative transposase of IS4/5 family (DUF4096) ABM06_15230 PF00196 Bacterial regulatory proteins, luxR family ABM06_15230 PF00072 Response regulator receiver domain ABM06_15240 PF05598 Transposase domain (DUF772) ABM06_15240 PF01609 Transposase DDE domain ABM06_15250 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABM06_15260 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ABM06_15260 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ABM06_15260 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ABM06_15270 PF01648 4'-phosphopantetheinyl transferase superfamily ABM06_15270 PF17837 4'-phosphopantetheinyl transferase N-terminal domain ABM06_15300 PF01609 Transposase DDE domain ABM06_15300 PF05598 Transposase domain (DUF772) ABM06_15325 PF00072 Response regulator receiver domain ABM06_15325 PF03861 ANTAR domain ABM06_15335 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ABM06_15335 PF10414 Sirohaem synthase dimerisation region ABM06_15335 PF14824 Sirohaem biosynthesis protein central ABM06_15360 PF12804 MobA-like NTP transferase domain ABM06_15365 PF00994 Probable molybdopterin binding domain ABM06_15365 PF03454 MoeA C-terminal region (domain IV) ABM06_15365 PF03453 MoeA N-terminal region (domain I and II) ABM06_15420 PF00872 Transposase, Mutator family ABM06_15425 PF00593 TonB dependent receptor ABM06_15425 PF07715 TonB-dependent Receptor Plug Domain ABM06_15445 PF04616 Glycosyl hydrolases family 43 ABM06_15450 PF07532 Bacterial Ig-like domain (group 4) ABM06_15455 PF00593 TonB dependent receptor ABM06_15455 PF07715 TonB-dependent Receptor Plug Domain ABM06_15465 PF09286 Pro-kumamolisin, activation domain ABM06_15465 PF00082 Subtilase family ABM06_15505 PF13520 Amino acid permease ABM06_15520 PF00557 Metallopeptidase family M24 ABM06_15520 PF01321 Creatinase/Prolidase N-terminal domain ABM06_15525 PF00171 Aldehyde dehydrogenase family ABM06_15530 PF00701 Dihydrodipicolinate synthetase family ABM06_15535 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABM06_15535 PF04324 BFD-like [2Fe-2S] binding domain ABM06_15545 PF01266 FAD dependent oxidoreductase ABM06_15550 PF05544 Proline racemase ABM06_15560 PF02881 SRP54-type protein, helical bundle domain ABM06_15560 PF00448 SRP54-type protein, GTPase domain ABM06_15570 PF14815 NUDIX domain ABM06_15570 PF00633 Helix-hairpin-helix motif ABM06_15570 PF00730 HhH-GPD superfamily base excision DNA repair protein ABM06_15575 PF04362 Bacterial Fe(2+) trafficking ABM06_15580 PF00072 Response regulator receiver domain ABM06_15580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABM06_15580 PF13426 PAS domain ABM06_15590 PF05598 Transposase domain (DUF772) ABM06_15690 PF03808 Glycosyl transferase WecB/TagA/CpsF family ABM06_15705 PF14667 Polysaccharide biosynthesis C-terminal domain ABM06_15715 PF13439 Glycosyltransferase Family 4 ABM06_15715 PF00534 Glycosyl transferases group 1 ABM06_15735 PF02397 Bacterial sugar transferase ABM06_15755 PF13411 MerR HTH family regulatory protein ABM06_15760 PF00216 Bacterial DNA-binding protein ABM06_15765 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ABM06_15765 PF03483 B3/4 domain ABM06_15765 PF01588 Putative tRNA binding domain ABM06_15765 PF03484 tRNA synthetase B5 domain ABM06_15765 PF03147 Ferredoxin-fold anticodon binding domain ABM06_15770 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ABM06_15770 PF01409 tRNA synthetases class II core domain (F) ABM06_15775 PF00453 Ribosomal protein L20 ABM06_15780 PF01632 Ribosomal protein L35 ABM06_15785 PF00707 Translation initiation factor IF-3, C-terminal domain ABM06_15785 PF05198 Translation initiation factor IF-3, N-terminal domain ABM06_15790 PF02824 TGS domain ABM06_15790 PF03129 Anticodon binding domain ABM06_15790 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ABM06_15790 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABM06_15800 PF01527 Transposase ABM06_15820 PF04851 Type III restriction enzyme, res subunit ABM06_15820 PF17757 UvrB interaction domain ABM06_15820 PF12344 Ultra-violet resistance protein B ABM06_15820 PF02151 UvrB/uvrC motif ABM06_15820 PF00271 Helicase conserved C-terminal domain ABM06_15825 PF07963 Prokaryotic N-terminal methylation motif ABM06_15825 PF00114 Pilin (bacterial filament) ABM06_15835 PF00114 Pilin (bacterial filament) ABM06_15835 PF07963 Prokaryotic N-terminal methylation motif ABM06_15840 PF05567 Neisseria PilC beta-propeller domain ABM06_15860 PF07963 Prokaryotic N-terminal methylation motif ABM06_15860 PF12019 Type II transport protein GspH ABM06_15865 PF11892 Domain of unknown function (DUF3412) ABM06_15865 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases ABM06_15865 PF03641 Possible lysine decarboxylase ABM06_15870 PF00593 TonB dependent receptor ABM06_15875 PF01914 MarC family integral membrane protein ABM06_15885 PF00462 Glutaredoxin ABM06_15890 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ABM06_15890 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ABM06_15895 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ABM06_15895 PF02222 ATP-grasp domain ABM06_15900 PF00731 AIR carboxylase ABM06_15910 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ABM06_15910 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ABM06_15920 PF01138 3' exoribonuclease family, domain 1 ABM06_15920 PF00575 S1 RNA binding domain ABM06_15920 PF03725 3' exoribonuclease family, domain 2 ABM06_15920 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ABM06_15920 PF00013 KH domain ABM06_15925 PF00312 Ribosomal protein S15 ABM06_15930 PF16198 tRNA pseudouridylate synthase B C-terminal domain ABM06_15930 PF01509 TruB family pseudouridylate synthase (N terminal domain) ABM06_15930 PF09157 Pseudouridine synthase II TruB, C-terminal ABM06_15935 PF02033 Ribosome-binding factor A ABM06_15940 PF00009 Elongation factor Tu GTP binding domain ABM06_15940 PF11987 Translation-initiation factor 2 ABM06_15940 PF04760 Translation initiation factor IF-2, N-terminal region ABM06_15940 PF08364 Bacterial translation initiation factor IF-2 associated region ABM06_15945 PF13184 NusA-like KH domain ABM06_15945 PF08529 NusA N-terminal domain ABM06_15945 PF00575 S1 RNA binding domain ABM06_15950 PF17384 RimP C-terminal SH3 domain ABM06_15950 PF02576 RimP N-terminal domain ABM06_15960 PF00361 Proton-conducting membrane transporter ABM06_15965 PF00361 Proton-conducting membrane transporter ABM06_15965 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus ABM06_15970 PF00361 Proton-conducting membrane transporter ABM06_15970 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ABM06_15975 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ABM06_15980 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ABM06_15985 PF12838 4Fe-4S dicluster domain ABM06_15990 PF00146 NADH dehydrogenase ABM06_15995 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ABM06_15995 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal ABM06_15995 PF00384 Molybdopterin oxidoreductase ABM06_16000 PF10531 SLBB domain ABM06_16000 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ABM06_16000 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ABM06_16010 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ABM06_16015 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ABM06_16020 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ABM06_16025 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ABM06_16040 PF00121 Triosephosphate isomerase ABM06_16060 PF13340 Putative transposase of IS4/5 family (DUF4096) ABM06_16075 PF03707 Bacterial signalling protein N terminal repeat ABM06_16075 PF00563 EAL domain ABM06_16075 PF00990 Diguanylate cyclase, GGDEF domain ABM06_16090 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ABM06_16090 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ABM06_16090 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ABM06_16090 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ABM06_16095 PF01039 Carboxyl transferase domain ABM06_16095 PF17848 Acetyl-coA carboxylase zinc finger domain ABM06_16100 PF00290 Tryptophan synthase alpha chain ABM06_16110 PF00291 Pyridoxal-phosphate dependent enzyme ABM06_16115 PF03466 LysR substrate binding domain ABM06_16115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABM06_16120 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ABM06_16125 PF01416 tRNA pseudouridine synthase ABM06_16140 PF01118 Semialdehyde dehydrogenase, NAD binding domain ABM06_16140 PF02774 Semialdehyde dehydrogenase, dimerisation domain ABM06_16145 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABM06_16145 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABM06_16150 PF01264 Chorismate synthase ABM06_16155 PF05175 Methyltransferase small domain ABM06_16160 PF02630 SCO1/SenC ABM06_16165 PF02666 Phosphatidylserine decarboxylase ABM06_16175 PF05872 Bacterial protein of unknown function (DUF853) ABM06_16180 PF13936 Helix-turn-helix domain ABM06_16180 PF00665 Integrase core domain ABM06_16195 PF01272 Transcription elongation factor, GreA/GreB, C-term ABM06_16195 PF03449 Transcription elongation factor, N-terminal ABM06_16200 PF18693 TRAM domain ABM06_16200 PF04055 Radical SAM superfamily ABM06_16200 PF00919 Uncharacterized protein family UPF0004 ABM06_16205 PF01738 Dienelactone hydrolase family ABM06_16225 PF00692 dUTPase ABM06_16230 PF10609 NUBPL iron-transfer P-loop NTPase ABM06_16265 PF01266 FAD dependent oxidoreductase ABM06_16270 PF04235 Protein of unknown function (DUF418) ABM06_16275 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABM06_16280 PF00877 NlpC/P60 family ABM06_16285 PF00877 NlpC/P60 family ABM06_16300 PF00375 Sodium:dicarboxylate symporter family ABM06_16305 PF00245 Alkaline phosphatase ABM06_16310 PF11734 TilS substrate C-terminal domain ABM06_16310 PF01171 PP-loop family ABM06_16310 PF09179 TilS substrate binding domain ABM06_16315 PF02609 Exonuclease VII small subunit ABM06_16320 PF00348 Polyprenyl synthetase ABM06_16340 PF01523 Putative modulator of DNA gyrase ABM06_16345 PF04751 Protein of unknown function (DUF615) ABM06_16350 PF01523 Putative modulator of DNA gyrase ABM06_16360 PF13502 AsmA-like C-terminal region ABM06_16360 PF13116 Protein of unknown function ABM06_16365 PF10150 Ribonuclease E/G family ABM06_16365 PF00575 S1 RNA binding domain ABM06_16370 PF02545 Maf-like protein ABM06_16375 PF04402 Protein of unknown function (DUF541) ABM06_16390 PF02590 Predicted SPOUT methyltransferase ABM06_16410 PF01467 Cytidylyltransferase-like ABM06_16425 PF00133 tRNA synthetases class I (I, L, M and V) ABM06_16425 PF08264 Anticodon-binding domain of tRNA ABM06_16425 PF13603 Leucyl-tRNA synthetase, Domain 2 ABM06_16435 PF00085 Thioredoxin ABM06_16450 PF13340 Putative transposase of IS4/5 family (DUF4096) ABM06_16500 PF13340 Putative transposase of IS4/5 family (DUF4096) ABM06_16510 PF00128 Alpha amylase, catalytic domain ABM06_16510 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ABM06_16515 PF05598 Transposase domain (DUF772) ABM06_16515 PF01609 Transposase DDE domain ABM06_16520 PF01609 Transposase DDE domain ABM06_16520 PF05598 Transposase domain (DUF772) ABM06_16540 PF13340 Putative transposase of IS4/5 family (DUF4096) ABM06_16545 PF13936 Helix-turn-helix domain ABM06_16545 PF00665 Integrase core domain ABM06_16570 PF13683 Integrase core domain ABM06_16570 PF13276 HTH-like domain ABM06_16595 PF00657 GDSL-like Lipase/Acylhydrolase ABM06_16595 PF03797 Autotransporter beta-domain ABM06_16605 PF05690 Thiazole biosynthesis protein ThiG ABM06_16610 PF02390 Putative methyltransferase ABM06_16615 PF02080 TrkA-C domain ABM06_16615 PF03600 Citrate transporter ABM06_16645 PF13936 Helix-turn-helix domain ABM06_16645 PF00665 Integrase core domain ABM06_16650 PF01557 Fumarylacetoacetate (FAA) hydrolase family ABM06_16655 PF01741 Large-conductance mechanosensitive channel, MscL ABM06_16665 PF13340 Putative transposase of IS4/5 family (DUF4096) ABM06_16675 PF00135 Carboxylesterase family ABM06_16680 PF00588 SpoU rRNA Methylase family ABM06_16680 PF08032 RNA 2'-O ribose methyltransferase substrate binding ABM06_16710 PF11838 ERAP1-like C-terminal domain ABM06_16710 PF01433 Peptidase family M1 domain ABM06_16715 PF00873 AcrB/AcrD/AcrF family ABM06_16720 PF00529 HlyD membrane-fusion protein of T1SS ABM06_16720 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABM06_16725 PF00009 Elongation factor Tu GTP binding domain ABM06_16730 PF01507 Phosphoadenosine phosphosulfate reductase family ABM06_16735 PF00667 FAD binding domain ABM06_16735 PF00175 Oxidoreductase NAD-binding domain ABM06_16735 PF00258 Flavodoxin ABM06_16740 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ABM06_16740 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ABM06_16745 PF01507 Phosphoadenosine phosphosulfate reductase family ABM06_16765 PF00512 His Kinase A (phospho-acceptor) domain ABM06_16765 PF00072 Response regulator receiver domain ABM06_16765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABM06_16765 PF01627 Hpt domain ABM06_16765 PF00672 HAMP domain ABM06_16775 PF03466 LysR substrate binding domain ABM06_16775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABM06_16780 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ABM06_16780 PF14824 Sirohaem biosynthesis protein central ABM06_16780 PF10414 Sirohaem synthase dimerisation region ABM06_16785 PF00291 Pyridoxal-phosphate dependent enzyme ABM06_16795 PF01661 Macro domain ABM06_16800 PF00274 Fructose-bisphosphate aldolase class-I ABM06_16805 PF02887 Pyruvate kinase, alpha/beta domain ABM06_16805 PF00224 Pyruvate kinase, barrel domain ABM06_16815 PF00162 Phosphoglycerate kinase ABM06_16845 PF18011 C-terminal domain found in long catalases ABM06_16845 PF06628 Catalase-related immune-responsive ABM06_16845 PF00199 Catalase ABM06_16860 PF01609 Transposase DDE domain ABM06_16860 PF05598 Transposase domain (DUF772) ABM06_16880 PF02311 AraC-like ligand binding domain ABM06_16880 PF12833 Helix-turn-helix domain ABM06_16900 PF05598 Transposase domain (DUF772) ABM06_16915 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region ABM06_16915 PF07676 WD40-like Beta Propeller Repeat ABM06_16915 PF00326 Prolyl oligopeptidase family ABM06_16930 PF01609 Transposase DDE domain ABM06_16930 PF05598 Transposase domain (DUF772) ABM06_16935 PF03169 OPT oligopeptide transporter protein ABM06_16950 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ABM06_16950 PF02811 PHP domain ABM06_16950 PF07733 Bacterial DNA polymerase III alpha NTPase domain ABM06_16950 PF14579 Helix-hairpin-helix motif ABM06_16965 PF01726 LexA DNA binding domain ABM06_16965 PF00717 Peptidase S24-like ABM06_16995 PF00300 Histidine phosphatase superfamily (branch 1) ABM06_16995 PF13456 Reverse transcriptase-like ABM06_17035 PF11867 Domain of unknown function (DUF3387) ABM06_17035 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) ABM06_17035 PF18766 SWI2/SNF2 ATPase ABM06_17050 PF01420 Type I restriction modification DNA specificity domain ABM06_17055 PF08780 Nucleotidyltransferase substrate binding protein like ABM06_17060 PF02384 N-6 DNA Methylase ABM06_17080 PF08463 EcoEI R protein C-terminal ABM06_17080 PF04851 Type III restriction enzyme, res subunit ABM06_17080 PF00271 Helicase conserved C-terminal domain ABM06_17080 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) ABM06_17090 PF02384 N-6 DNA Methylase ABM06_17095 PF01420 Type I restriction modification DNA specificity domain ABM06_17175 PF16671 Actin cross-linking domain ABM06_17175 PF04717 Type VI secretion system, phage-baseplate injector ABM06_17185 PF10431 C-terminal, D2-small domain, of ClpB protein ABM06_17185 PF17871 AAA lid domain ABM06_17185 PF07724 AAA domain (Cdc48 subfamily) ABM06_17185 PF00004 ATPase family associated with various cellular activities (AAA) ABM06_17240 PF16671 Actin cross-linking domain ABM06_17240 PF04717 Type VI secretion system, phage-baseplate injector ABM06_17265 PF16671 Actin cross-linking domain ABM06_17265 PF04717 Type VI secretion system, phage-baseplate injector ABM06_17275 PF04717 Type VI secretion system, phage-baseplate injector ABM06_17275 PF16671 Actin cross-linking domain ABM06_17280 PF00182 Chitinase class I ABM06_17285 PF04717 Type VI secretion system, phage-baseplate injector ABM06_17285 PF16671 Actin cross-linking domain ABM06_17310 PF04717 Type VI secretion system, phage-baseplate injector ABM06_17320 PF05598 Transposase domain (DUF772) ABM06_17320 PF01609 Transposase DDE domain ABM06_17370 PF04717 Type VI secretion system, phage-baseplate injector ABM06_17385 PF00691 OmpA family ABM06_17385 PF04972 BON domain ABM06_17420 PF01527 Transposase ABM06_17425 PF02222 ATP-grasp domain ABM06_17450 PF00730 HhH-GPD superfamily base excision DNA repair protein ABM06_17465 PF00196 Bacterial regulatory proteins, luxR family ABM06_17465 PF00072 Response regulator receiver domain ABM06_17470 PF07730 Histidine kinase ABM06_17480 PF03775 Septum formation inhibitor MinC, C-terminal domain ABM06_17480 PF05209 Septum formation inhibitor MinC, N-terminal domain ABM06_17485 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ABM06_17490 PF03776 Septum formation topological specificity factor MinE ABM06_17500 PF00512 His Kinase A (phospho-acceptor) domain ABM06_17500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABM06_17500 PF08521 Two-component sensor kinase N-terminal ABM06_17505 PF00072 Response regulator receiver domain ABM06_17505 PF00486 Transcriptional regulatory protein, C terminal ABM06_17510 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase ABM06_17520 PF08019 Phosphoethanolamine transferase EptA/EptB ABM06_17520 PF00884 Sulfatase ABM06_17540 PF03412 Peptidase C39 family ABM06_17540 PF00664 ABC transporter transmembrane region ABM06_17540 PF00005 ABC transporter ABM06_17560 PF02347 Glycine cleavage system P-protein ABM06_17595 PF01527 Transposase ABM06_17605 PF13340 Putative transposase of IS4/5 family (DUF4096) ABM06_17620 PF01196 Ribosomal protein L17 ABM06_17625 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ABM06_17625 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ABM06_17625 PF01000 RNA polymerase Rpb3/RpoA insert domain ABM06_17630 PF00163 Ribosomal protein S4/S9 N-terminal domain ABM06_17630 PF01479 S4 domain ABM06_17635 PF00411 Ribosomal protein S11 ABM06_17640 PF00416 Ribosomal protein S13/S18 ABM06_17645 PF00344 SecY translocase ABM06_17650 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ABM06_17655 PF00327 Ribosomal protein L30p/L7e ABM06_17660 PF00333 Ribosomal protein S5, N-terminal domain ABM06_17660 PF03719 Ribosomal protein S5, C-terminal domain ABM06_17665 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ABM06_17670 PF00347 Ribosomal protein L6 ABM06_17675 PF00410 Ribosomal protein S8 ABM06_17680 PF00253 Ribosomal protein S14p/S29e ABM06_17685 PF00673 ribosomal L5P family C-terminus ABM06_17685 PF00281 Ribosomal protein L5 ABM06_17690 PF00467 KOW motif ABM06_17690 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ABM06_17695 PF00238 Ribosomal protein L14p/L23e ABM06_17700 PF00366 Ribosomal protein S17 ABM06_17705 PF00831 Ribosomal L29 protein ABM06_17710 PF00252 Ribosomal protein L16p/L10e ABM06_17715 PF07650 KH domain ABM06_17715 PF00189 Ribosomal protein S3, C-terminal domain ABM06_17720 PF00237 Ribosomal protein L22p/L17e ABM06_17725 PF00203 Ribosomal protein S19 ABM06_17730 PF00181 Ribosomal Proteins L2, RNA binding domain ABM06_17730 PF03947 Ribosomal Proteins L2, C-terminal domain ABM06_17735 PF00276 Ribosomal protein L23 ABM06_17740 PF00573 Ribosomal protein L4/L1 family ABM06_17745 PF00297 Ribosomal protein L3 ABM06_17750 PF00338 Ribosomal protein S10p/S20e ABM06_17760 PF03144 Elongation factor Tu domain 2 ABM06_17760 PF00009 Elongation factor Tu GTP binding domain ABM06_17760 PF03143 Elongation factor Tu C-terminal domain ABM06_17765 PF03764 Elongation factor G, domain IV ABM06_17765 PF14492 Elongation Factor G, domain II ABM06_17765 PF00009 Elongation factor Tu GTP binding domain ABM06_17765 PF03144 Elongation factor Tu domain 2 ABM06_17765 PF00679 Elongation factor G C-terminus ABM06_17770 PF00177 Ribosomal protein S7p/S5e ABM06_17775 PF00164 Ribosomal protein S12/S23 ABM06_17780 PF05000 RNA polymerase Rpb1, domain 4 ABM06_17780 PF04997 RNA polymerase Rpb1, domain 1 ABM06_17780 PF00623 RNA polymerase Rpb1, domain 2 ABM06_17780 PF04983 RNA polymerase Rpb1, domain 3 ABM06_17780 PF04998 RNA polymerase Rpb1, domain 5 ABM06_17785 PF04565 RNA polymerase Rpb2, domain 3 ABM06_17785 PF10385 RNA polymerase beta subunit external 1 domain ABM06_17785 PF04560 RNA polymerase Rpb2, domain 7 ABM06_17785 PF04561 RNA polymerase Rpb2, domain 2 ABM06_17785 PF00562 RNA polymerase Rpb2, domain 6 ABM06_17785 PF04563 RNA polymerase beta subunit ABM06_17790 PF16320 Ribosomal protein L7/L12 dimerisation domain ABM06_17790 PF00542 Ribosomal protein L7/L12 C-terminal domain ABM06_17795 PF00466 Ribosomal protein L10 ABM06_17800 PF00687 Ribosomal protein L1p/L10e family ABM06_17805 PF00298 Ribosomal protein L11, RNA binding domain ABM06_17805 PF03946 Ribosomal protein L11, N-terminal domain ABM06_17810 PF02357 Transcription termination factor nusG ABM06_17810 PF00467 KOW motif ABM06_17815 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ABM06_17825 PF03143 Elongation factor Tu C-terminal domain ABM06_17825 PF03144 Elongation factor Tu domain 2 ABM06_17825 PF00009 Elongation factor Tu GTP binding domain ABM06_17845 PF01926 50S ribosome-binding GTPase ABM06_17845 PF06071 Protein of unknown function (DUF933) ABM06_17850 PF01195 Peptidyl-tRNA hydrolase ABM06_17855 PF14693 Ribosomal protein TL5, C-terminal domain ABM06_17855 PF01386 Ribosomal L25p family ABM06_17860 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ABM06_17860 PF14572 Phosphoribosyl synthetase-associated domain ABM06_17870 PF08544 GHMP kinases C terminal ABM06_17870 PF00288 GHMP kinases N terminal domain ABM06_17875 PF03550 Outer membrane lipoprotein LolB ABM06_17885 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ABM06_17885 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ABM06_17885 PF01488 Shikimate / quinate 5-dehydrogenase ABM06_17890 PF03462 PCRF domain ABM06_17890 PF00472 RF-1 domain ABM06_17900 PF00994 Probable molybdopterin binding domain ABM06_17905 PF03976 Polyphosphate kinase 2 (PPK2) ABM06_17915 PF00708 Acylphosphatase ABM06_17920 PF08534 Redoxin ABM06_17925 PF03631 Virulence factor BrkB ABM06_17930 PF03358 NADPH-dependent FMN reductase ABM06_17940 PF17189 Glycosyl hydrolase family 30 beta sandwich domain ABM06_17940 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain ABM06_17950 PF04073 Aminoacyl-tRNA editing domain ABM06_17960 PF01063 Amino-transferase class IV ABM06_17990 PF02233 NAD(P) transhydrogenase beta subunit ABM06_17995 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch ABM06_18015 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ABM06_18015 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch ABM06_18015 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ABM06_18030 PF01367 5'-3' exonuclease, C-terminal SAM fold ABM06_18030 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ABM06_18030 PF00476 DNA polymerase family A ABM06_18030 PF01612 3'-5' exonuclease ABM06_18035 PF00293 NUDIX domain ABM06_18045 PF00561 alpha/beta hydrolase fold ABM06_18075 PF17827 PrmC N-terminal domain ABM06_18075 PF05175 Methyltransferase small domain ABM06_18080 PF10417 C-terminal domain of 1-Cys peroxiredoxin ABM06_18080 PF00578 AhpC/TSA family ABM06_18085 PF13192 Thioredoxin domain ABM06_18085 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABM06_18090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABM06_18090 PF03466 LysR substrate binding domain ABM06_18095 PF03449 Transcription elongation factor, N-terminal ABM06_18095 PF01272 Transcription elongation factor, GreA/GreB, C-term ABM06_18100 PF00923 Transaldolase/Fructose-6-phosphate aldolase ABM06_18120 PF01625 Peptide methionine sulfoxide reductase ABM06_18160 PF00462 Glutaredoxin ABM06_18165 PF13181 Tetratricopeptide repeat ABM06_18165 PF01435 Peptidase family M48 ABM06_18170 PF00072 Response regulator receiver domain ABM06_18170 PF00486 Transcriptional regulatory protein, C terminal ABM06_18175 PF00512 His Kinase A (phospho-acceptor) domain ABM06_18175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABM06_18175 PF11808 Phosphate regulon sensor protein PhoR ABM06_18175 PF00989 PAS fold ABM06_18180 PF17941 Polyphosphate kinase C-terminal domain 1 ABM06_18180 PF13090 Polyphosphate kinase C-terminal domain 2 ABM06_18180 PF13089 Polyphosphate kinase N-terminal domain ABM06_18180 PF02503 Polyphosphate kinase middle domain ABM06_18185 PF02541 Ppx/GppA phosphatase family ABM06_18190 PF13439 Glycosyltransferase Family 4 ABM06_18190 PF00534 Glycosyl transferases group 1 ABM06_18195 PF01569 PAP2 superfamily ABM06_18200 PF00149 Calcineurin-like phosphoesterase ABM06_18210 PF04305 Protein of unknown function (DUF455) ABM06_18215 PF00156 Phosphoribosyl transferase domain ABM06_18230 PF02875 Mur ligase family, glutamate ligase domain ABM06_18230 PF08245 Mur ligase middle domain ABM06_18235 PF00300 Histidine phosphatase superfamily (branch 1) ABM06_18240 PF10459 Peptidase S46 ABM06_18245 PF05506 Domain of unknown function (DUF756) ABM06_18245 PF04185 Phosphoesterase family ABM06_18255 PF00107 Zinc-binding dehydrogenase ABM06_18255 PF08240 Alcohol dehydrogenase GroES-like domain ABM06_18265 PF12857 TOBE-like domain ABM06_18265 PF17850 CysA C-terminal regulatory domain ABM06_18265 PF00005 ABC transporter ABM06_18270 PF00528 Binding-protein-dependent transport system inner membrane component ABM06_18275 PF00528 Binding-protein-dependent transport system inner membrane component ABM06_18285 PF00155 Aminotransferase class I and II ABM06_18295 PF00849 RNA pseudouridylate synthase ABM06_18305 PF00691 OmpA family ABM06_18305 PF05736 OprF membrane domain ABM06_18310 PF00107 Zinc-binding dehydrogenase ABM06_18310 PF08240 Alcohol dehydrogenase GroES-like domain ABM06_18315 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABM06_18315 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABM06_18325 PF01527 Transposase ABM06_18355 PF00072 Response regulator receiver domain ABM06_18355 PF01627 Hpt domain ABM06_18355 PF00512 His Kinase A (phospho-acceptor) domain ABM06_18355 PF00672 HAMP domain ABM06_18355 PF17149 Periplasmic sensor domain found in signal transduction proteins ABM06_18355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABM06_18360 PF00072 Response regulator receiver domain ABM06_18360 PF00990 Diguanylate cyclase, GGDEF domain ABM06_18380 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ABM06_18380 PF00749 tRNA synthetases class I (E and Q), catalytic domain ABM06_18385 PF13936 Helix-turn-helix domain ABM06_18385 PF00665 Integrase core domain ABM06_18395 PF13340 Putative transposase of IS4/5 family (DUF4096) ABM06_18425 PF01728 FtsJ-like methyltransferase ABM06_18425 PF18125 RlmM ferredoxin-like domain ABM06_18430 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ABM06_18430 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ABM06_18435 PF08450 SMP-30/Gluconolactonase/LRE-like region ABM06_18455 PF00378 Enoyl-CoA hydratase/isomerase ABM06_18460 PF00171 Aldehyde dehydrogenase family ABM06_18465 PF00501 AMP-binding enzyme ABM06_18465 PF13193 AMP-binding enzyme C-terminal domain ABM06_18470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABM06_18470 PF03466 LysR substrate binding domain ABM06_18480 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ABM06_18510 PF01494 FAD binding domain ABM06_18515 PF01494 FAD binding domain ABM06_18525 PF01923 Cobalamin adenosyltransferase ABM06_18530 PF00850 Histone deacetylase domain ABM06_18535 PF03968 OstA-like protein ABM06_18535 PF04453 LPS transport system D ABM06_18540 PF09312 SurA N-terminal domain ABM06_18540 PF00639 PPIC-type PPIASE domain ABM06_18545 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ABM06_18550 PF00398 Ribosomal RNA adenine dimethylase ABM06_18555 PF04379 ApaG domain ABM06_18560 PF00149 Calcineurin-like phosphoesterase ABM06_18565 PF00186 Dihydrofolate reductase ABM06_18575 PF00303 Thymidylate synthase ABM06_18580 PF01790 Prolipoprotein diacylglyceryl transferase ABM06_18600 PF01219 Prokaryotic diacylglycerol kinase ABM06_18610 PF08521 Two-component sensor kinase N-terminal ABM06_18610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABM06_18610 PF00512 His Kinase A (phospho-acceptor) domain ABM06_18615 PF00486 Transcriptional regulatory protein, C terminal ABM06_18615 PF00072 Response regulator receiver domain ABM06_18620 PF13472 GDSL-like Lipase/Acylhydrolase family ABM06_18625 PF00005 ABC transporter ABM06_18635 PF02668 Taurine catabolism dioxygenase TauD, TfdA family ABM06_18645 PF00005 ABC transporter ABM06_18670 PF00248 Aldo/keto reductase family ABM06_18680 PF01773 Na+ dependent nucleoside transporter N-terminus ABM06_18680 PF07662 Na+ dependent nucleoside transporter C-terminus ABM06_18680 PF07670 Nucleoside recognition ABM06_18685 PF00294 pfkB family carbohydrate kinase ABM06_18700 PF01207 Dihydrouridine synthase (Dus) ABM06_18705 PF13649 Methyltransferase domain ABM06_18715 PF02772 S-adenosylmethionine synthetase, central domain ABM06_18715 PF00438 S-adenosylmethionine synthetase, N-terminal domain ABM06_18715 PF02773 S-adenosylmethionine synthetase, C-terminal domain ABM06_18725 PF13340 Putative transposase of IS4/5 family (DUF4096) ABM06_18730 PF00328 Histidine phosphatase superfamily (branch 2) ABM06_18755 PF00311 Phosphoenolpyruvate carboxylase ABM06_18765 PF05221 S-adenosyl-L-homocysteine hydrolase ABM06_18765 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ABM06_18770 PF13649 Methyltransferase domain ABM06_18800 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ABM06_18815 PF00082 Subtilase family ABM06_18815 PF09286 Pro-kumamolisin, activation domain ABM06_18820 PF14765 Polyketide synthase dehydratase ABM06_18820 PF08240 Alcohol dehydrogenase GroES-like domain ABM06_18820 PF00107 Zinc-binding dehydrogenase ABM06_18820 PF16197 Ketoacyl-synthetase C-terminal extension ABM06_18820 PF00109 Beta-ketoacyl synthase, N-terminal domain ABM06_18820 PF08659 KR domain ABM06_18820 PF00550 Phosphopantetheine attachment site ABM06_18820 PF02801 Beta-ketoacyl synthase, C-terminal domain ABM06_18820 PF00698 Acyl transferase domain ABM06_18830 PF02219 Methylenetetrahydrofolate reductase ABM06_18845 PF00293 NUDIX domain ABM06_18855 PF07517 SecA DEAD-like domain ABM06_18855 PF07516 SecA Wing and Scaffold domain ABM06_18855 PF02810 SEC-C motif ABM06_18855 PF01043 SecA preprotein cross-linking domain ABM06_18860 PF01551 Peptidase family M23 ABM06_18860 PF01476 LysM domain ABM06_18870 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ABM06_18875 PF00091 Tubulin/FtsZ family, GTPase domain ABM06_18875 PF12327 FtsZ family, C-terminal domain ABM06_18880 PF02491 SHS2 domain inserted in FTSA ABM06_18885 PF03799 Cell division protein FtsQ ABM06_18885 PF08478 POTRA domain, FtsQ-type ABM06_18890 PF07478 D-ala D-ala ligase C-terminus ABM06_18890 PF01820 D-ala D-ala ligase N-terminus ABM06_18895 PF01225 Mur ligase family, catalytic domain ABM06_18895 PF02875 Mur ligase family, glutamate ligase domain ABM06_18895 PF08245 Mur ligase middle domain ABM06_18900 PF04101 Glycosyltransferase family 28 C-terminal domain ABM06_18900 PF03033 Glycosyltransferase family 28 N-terminal domain ABM06_18905 PF01098 Cell cycle protein ABM06_18910 PF00953 Glycosyl transferase family 4 ABM06_18915 PF08245 Mur ligase middle domain ABM06_18915 PF01225 Mur ligase family, catalytic domain ABM06_18915 PF02875 Mur ligase family, glutamate ligase domain ABM06_18920 PF08245 Mur ligase middle domain ABM06_18920 PF01225 Mur ligase family, catalytic domain ABM06_18920 PF02875 Mur ligase family, glutamate ligase domain ABM06_18925 PF00905 Penicillin binding protein transpeptidase domain ABM06_18925 PF03717 Penicillin-binding Protein dimerisation domain ABM06_18930 PF04999 Cell division protein FtsL ABM06_18935 PF01795 MraW methylase family ABM06_18940 PF02381 MraZ protein, putative antitoxin-like ABM06_18955 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ABM06_18965 PF02021 Uncharacterised protein family UPF0102 ABM06_18970 PF04307 LexA-binding, inner membrane-associated putative hydrolase ABM06_18975 PF02913 FAD linked oxidases, C-terminal domain ABM06_18975 PF01565 FAD binding domain ABM06_18980 PF00486 Transcriptional regulatory protein, C terminal ABM06_18980 PF00072 Response regulator receiver domain ABM06_18985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABM06_18985 PF00512 His Kinase A (phospho-acceptor) domain ABM06_18985 PF13492 GAF domain ABM06_18985 PF02702 Osmosensitive K+ channel His kinase sensor domain ABM06_18985 PF13493 Domain of unknown function (DUF4118) ABM06_18990 PF02669 K+-transporting ATPase, c chain ABM06_19000 PF03814 Potassium-transporting ATPase A subunit ABM06_19025 PF02769 AIR synthase related protein, C-terminal domain ABM06_19025 PF00586 AIR synthase related protein, N-terminal domain ABM06_19030 PF01029 NusB family ABM06_19035 PF00885 6,7-dimethyl-8-ribityllumazine synthase ABM06_19040 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ABM06_19040 PF00925 GTP cyclohydrolase II ABM06_19045 PF00677 Lumazine binding domain ABM06_19055 PF01872 RibD C-terminal domain ABM06_19055 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ABM06_19065 PF03477 ATP cone domain ABM06_19075 PF00464 Serine hydroxymethyltransferase ABM06_19095 PF00005 ABC transporter ABM06_19095 PF12848 ABC transporter ABM06_19115 PF00756 Putative esterase ABM06_19125 PF08240 Alcohol dehydrogenase GroES-like domain ABM06_19125 PF00107 Zinc-binding dehydrogenase ABM06_19130 PF02583 Metal-sensitive transcriptional repressor ABM06_19140 PF00486 Transcriptional regulatory protein, C terminal ABM06_19140 PF00072 Response regulator receiver domain ABM06_19145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABM06_19145 PF00512 His Kinase A (phospho-acceptor) domain ABM06_19145 PF00672 HAMP domain ABM06_19145 PF16527 Two-component sensor protein CpxA, periplasmic domain ABM06_19180 PF04107 Glutamate-cysteine ligase family 2(GCS2) ABM06_19195 PF01609 Transposase DDE domain ABM06_19195 PF05598 Transposase domain (DUF772) ABM06_19200 PF01926 50S ribosome-binding GTPase ABM06_19205 PF00034 Cytochrome c ABM06_19225 PF02028 BCCT, betaine/carnitine/choline family transporter ABM06_19235 PF01527 Transposase ABM06_19240 PF05598 Transposase domain (DUF772) ABM06_19240 PF01609 Transposase DDE domain ABM06_19245 PF13291 ACT domain ABM06_19245 PF00291 Pyridoxal-phosphate dependent enzyme ABM06_19250 PF13340 Putative transposase of IS4/5 family (DUF4096) ABM06_19260 PF05598 Transposase domain (DUF772) ABM06_19260 PF01609 Transposase DDE domain ABM06_19265 PF01527 Transposase ABM06_19285 PF01743 Poly A polymerase head domain ABM06_19285 PF12627 Probable RNA and SrmB- binding site of polymerase A ABM06_19285 PF01966 HD domain ABM06_19300 PF05598 Transposase domain (DUF772) ABM06_19300 PF01609 Transposase DDE domain ABM06_19305 PF13340 Putative transposase of IS4/5 family (DUF4096) ABM06_19335 PF01522 Polysaccharide deacetylase ABM06_19335 PF14883 Hypothetical glycosyl hydrolase family 13 ABM06_19340 PF00535 Glycosyl transferase family 2 ABM06_19350 PF01979 Amidohydrolase family ABM06_19355 PF01380 SIS domain ABM06_19360 PF00356 Bacterial regulatory proteins, lacI family ABM06_19365 PF07690 Major Facilitator Superfamily ABM06_19385 PF16355 Domain of unknown function (DUF4982) ABM06_19385 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 ABM06_19385 PF02837 Glycosyl hydrolases family 2, sugar binding domain ABM06_19385 PF00703 Glycosyl hydrolases family 2 ABM06_19385 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ABM06_19400 PF01527 Transposase ABM06_19410 PF13276 HTH-like domain ABM06_19410 PF13683 Integrase core domain ABM06_19430 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ABM06_19435 PF00512 His Kinase A (phospho-acceptor) domain ABM06_19435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABM06_19440 PF00072 Response regulator receiver domain ABM06_19445 PF00360 Phytochrome region ABM06_19445 PF01590 GAF domain ABM06_19445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABM06_19445 PF00512 His Kinase A (phospho-acceptor) domain ABM06_19445 PF08446 PAS fold ABM06_19450 PF04972 BON domain ABM06_19455 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ABM06_19455 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ABM06_19460 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ABM06_19460 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ABM06_19500 PF01467 Cytidylyltransferase-like ABM06_19500 PF00293 NUDIX domain ABM06_19510 PF17804 Tail specific protease N-terminal domain ABM06_19510 PF03572 Peptidase family S41 ABM06_19510 PF00595 PDZ domain ABM06_19510 PF11818 C-terminal domain of tail specific protease (DUF3340) ABM06_19520 PF12950 TaqI-like C-terminal specificity domain ABM06_19520 PF07669 Eco57I restriction-modification methylase ABM06_19525 PF04055 Radical SAM superfamily ABM06_19525 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family ABM06_19530 PF03099 Biotin/lipoate A/B protein ligase family ABM06_19535 PF04359 Protein of unknown function (DUF493) ABM06_19545 PF07943 Penicillin-binding protein 5, C-terminal domain ABM06_19545 PF00768 D-alanyl-D-alanine carboxypeptidase ABM06_19555 PF05036 Sporulation related domain ABM06_19555 PF03330 Lytic transglycolase ABM06_19560 PF13406 Transglycosylase SLT domain ABM06_19570 PF16671 Actin cross-linking domain ABM06_19570 PF04717 Type VI secretion system, phage-baseplate injector ABM06_19595 PF01098 Cell cycle protein ABM06_19600 PF00905 Penicillin binding protein transpeptidase domain ABM06_19600 PF03717 Penicillin-binding Protein dimerisation domain ABM06_19610 PF04085 rod shape-determining protein MreC ABM06_19620 PF00294 pfkB family carbohydrate kinase ABM06_19640 PF13673 Acetyltransferase (GNAT) domain ABM06_19655 PF13533 Biotin-lipoyl like ABM06_19665 PF01209 ubiE/COQ5 methyltransferase family ABM06_19670 PF00990 Diguanylate cyclase, GGDEF domain ABM06_19670 PF17152 Periplasmic sensor domain ABM06_19675 PF01433 Peptidase family M1 domain ABM06_19675 PF11838 ERAP1-like C-terminal domain ABM06_19690 PF00004 ATPase family associated with various cellular activities (AAA) ABM06_19690 PF07724 AAA domain (Cdc48 subfamily) ABM06_19690 PF10431 C-terminal, D2-small domain, of ClpB protein ABM06_19695 PF00227 Proteasome subunit ABM06_19700 PF02899 Phage integrase, N-terminal SAM-like domain ABM06_19700 PF00589 Phage integrase family ABM06_19710 PF01678 Diaminopimelate epimerase ABM06_19725 PF00326 Prolyl oligopeptidase family ABM06_19725 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ABM06_19730 PF00155 Aminotransferase class I and II ABM06_19745 PF00326 Prolyl oligopeptidase family ABM06_19745 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ABM06_19770 PF03900 Porphobilinogen deaminase, C-terminal domain ABM06_19770 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ABM06_19775 PF04397 LytTr DNA-binding domain ABM06_19775 PF00072 Response regulator receiver domain ABM06_19780 PF07694 5TMR of 5TMR-LYT ABM06_19780 PF06580 Histidine kinase ABM06_19790 PF13632 Glycosyl transferase family group 2 ABM06_19795 PF13340 Putative transposase of IS4/5 family (DUF4096) ABM06_19810 PF00990 Diguanylate cyclase, GGDEF domain ABM06_19810 PF08448 PAS fold ABM06_19820 PF00916 Sulfate permease family ABM06_19820 PF01740 STAS domain ABM06_19825 PF00553 Cellulose binding domain ABM06_19825 PF00150 Cellulase (glycosyl hydrolase family 5) ABM06_19835 PF00672 HAMP domain ABM06_19835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABM06_19835 PF02203 Tar ligand binding domain homologue ABM06_19840 PF03707 Bacterial signalling protein N terminal repeat ABM06_19840 PF00990 Diguanylate cyclase, GGDEF domain ABM06_19840 PF00563 EAL domain ABM06_19865 PF13340 Putative transposase of IS4/5 family (DUF4096) ABM06_19885 PF01204 Trehalase ABM06_19905 PF01544 CorA-like Mg2+ transporter protein ABM06_19915 PF00324 Amino acid permease ABM06_19920 PF00553 Cellulose binding domain ABM06_19920 PF00041 Fibronectin type III domain ABM06_19920 PF01341 Glycosyl hydrolases family 6 ABM06_19925 PF03330 Lytic transglycolase ABM06_19930 PF00892 EamA-like transporter family ABM06_19955 PF07759 Protein of unknown function (DUF1615) ABM06_19990 PF00106 short chain dehydrogenase ABM06_20005 PF01527 Transposase ABM06_20015 PF04715 Anthranilate synthase component I, N terminal region ABM06_20015 PF00425 chorismate binding enzyme ABM06_20020 PF00781 Diacylglycerol kinase catalytic domain ABM06_20025 PF00583 Acetyltransferase (GNAT) family ABM06_20030 PF00834 Ribulose-phosphate 3 epimerase family ABM06_20035 PF00226 DnaJ domain ABM06_20035 PF05099 Tellurite resistance protein TerB ABM06_20040 PF01259 SAICAR synthetase ABM06_20065 PF02868 Thermolysin metallopeptidase, alpha-helical domain ABM06_20065 PF01483 Proprotein convertase P-domain ABM06_20065 PF07504 Fungalysin/Thermolysin Propeptide Motif ABM06_20065 PF01447 Thermolysin metallopeptidase, catalytic domain ABM06_20070 PF02868 Thermolysin metallopeptidase, alpha-helical domain ABM06_20070 PF01447 Thermolysin metallopeptidase, catalytic domain ABM06_20070 PF07504 Fungalysin/Thermolysin Propeptide Motif ABM06_20070 PF03413 Peptidase propeptide and YPEB domain ABM06_20085 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ABM06_20085 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter ABM06_20085 PF13244 Domain of unknown function (DUF4040) ABM06_20085 PF00361 Proton-conducting membrane transporter ABM06_20090 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ABM06_20095 PF00361 Proton-conducting membrane transporter ABM06_20105 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) ABM06_20110 PF03334 Na+/H+ antiporter subunit ABM06_20115 PF04209 homogentisate 1,2-dioxygenase ABM06_20120 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABM06_20125 PF01047 MarR family ABM06_20135 PF00854 POT family ABM06_20140 PF03301 Tryptophan 2,3-dioxygenase ABM06_20180 PF02803 Thiolase, C-terminal domain ABM06_20180 PF00108 Thiolase, N-terminal domain ABM06_20230 PF01609 Transposase DDE domain ABM06_20230 PF05598 Transposase domain (DUF772) ABM06_20260 PF01427 D-ala-D-ala dipeptidase ABM06_20265 PF01510 N-acetylmuramoyl-L-alanine amidase ABM06_20275 PF13378 Enolase C-terminal domain-like ABM06_20275 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ABM06_20300 PF13340 Putative transposase of IS4/5 family (DUF4096) ABM06_20310 PF13520 Amino acid permease ABM06_20325 PF13340 Putative transposase of IS4/5 family (DUF4096) ABM06_20340 PF05360 yiaA/B two helix domain ABM06_20345 PF07995 Glucose / Sorbosone dehydrogenase ABM06_20375 PF00665 Integrase core domain ABM06_20375 PF13936 Helix-turn-helix domain ABM06_20380 PF00933 Glycosyl hydrolase family 3 N terminal domain ABM06_20380 PF01915 Glycosyl hydrolase family 3 C-terminal domain ABM06_20380 PF14310 Fibronectin type III-like domain ABM06_20385 PF02152 Dihydroneopterin aldolase ABM06_20390 PF00814 Glycoprotease family ABM06_20395 PF01165 Ribosomal protein S21 ABM06_20400 PF09424 Yqey-like protein ABM06_20405 PF03631 Virulence factor BrkB ABM06_20410 PF01807 CHC2 zinc finger ABM06_20410 PF08275 DNA primase catalytic core, N-terminal domain ABM06_20410 PF08278 DNA primase DnaG DnaB-binding ABM06_20410 PF10410 DnaB-helicase binding domain of primase ABM06_20430 PF13593 SBF-like CPA transporter family (DUF4137) ABM06_20440 PF01040 UbiA prenyltransferase family ABM06_20465 PF00510 Cytochrome c oxidase subunit III ABM06_20470 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 ABM06_20480 PF00115 Cytochrome C and Quinol oxidase polypeptide I ABM06_20485 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ABM06_20485 PF02790 Cytochrome C oxidase subunit II, transmembrane domain ABM06_20495 PF14850 DNA-binding domain of Proline dehydrogenase ABM06_20495 PF01619 Proline dehydrogenase ABM06_20495 PF00171 Aldehyde dehydrogenase family ABM06_20495 PF18327 Proline utilization A proline dehydrogenase N-terminal domain ABM06_20500 PF01527 Transposase ABM06_20505 PF13683 Integrase core domain ABM06_20505 PF13276 HTH-like domain ABM06_20515 PF00210 Ferritin-like domain ABM06_20525 PF00293 NUDIX domain ABM06_20540 PF00380 Ribosomal protein S9/S16 ABM06_20545 PF00572 Ribosomal protein L13 ABM06_20550 PF03232 Ubiquinone biosynthesis protein COQ7 ABM06_20555 PF00893 Small Multidrug Resistance protein ABM06_20560 PF02675 S-adenosylmethionine decarboxylase ABM06_20565 PF00027 Cyclic nucleotide-binding domain ABM06_20565 PF00325 Bacterial regulatory proteins, crp family ABM06_20575 PF00218 Indole-3-glycerol phosphate synthase ABM06_20580 PF00591 Glycosyl transferase family, a/b domain ABM06_20580 PF02885 Glycosyl transferase family, helical bundle domain ABM06_20595 PF00117 Glutamine amidotransferase class-I ABM06_20605 PF01527 Transposase ABM06_20610 PF13683 Integrase core domain ABM06_20610 PF13276 HTH-like domain ABM06_20620 PF03971 Monomeric isocitrate dehydrogenase ABM06_20630 PF05598 Transposase domain (DUF772) ABM06_20665 PF05598 Transposase domain (DUF772) ABM06_20665 PF01609 Transposase DDE domain ABM06_20675 PF00872 Transposase, Mutator family ABM06_20680 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term ABM06_20680 PF14489 QueF-like protein ABM06_20690 PF07687 Peptidase dimerisation domain ABM06_20690 PF01546 Peptidase family M20/M25/M40 ABM06_20695 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABM06_20700 PF00873 AcrB/AcrD/AcrF family ABM06_20705 PF00873 AcrB/AcrD/AcrF family ABM06_20710 PF07063 Domain of unknown function (DUF1338) ABM06_20740 PF00581 Rhodanese-like domain ABM06_20745 PF02556 Preprotein translocase subunit SecB ABM06_20750 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ABM06_20750 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ABM06_20760 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABM06_20760 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABM06_20760 PF00205 Thiamine pyrophosphate enzyme, central domain ABM06_20765 PF00512 His Kinase A (phospho-acceptor) domain ABM06_20765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABM06_20770 PF02954 Bacterial regulatory protein, Fis family ABM06_20770 PF00072 Response regulator receiver domain ABM06_20770 PF00158 Sigma-54 interaction domain ABM06_20785 PF07690 Major Facilitator Superfamily ABM06_20790 PF00588 SpoU rRNA Methylase family ABM06_20805 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ABM06_20805 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ABM06_20810 PF13784 Fic/DOC family N-terminal ABM06_20810 PF02661 Fic/DOC family ABM06_20815 PF01555 DNA methylase ABM06_20825 PF00561 alpha/beta hydrolase fold ABM06_20830 PF03692 Putative zinc- or iron-chelating domain ABM06_20835 PF00501 AMP-binding enzyme ABM06_20840 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family ABM06_20850 PF05598 Transposase domain (DUF772) ABM06_20855 PF13340 Putative transposase of IS4/5 family (DUF4096) ABM06_20870 PF01966 HD domain ABM06_20870 PF11871 Domain of unknown function (DUF3391) ABM06_20875 PF07690 Major Facilitator Superfamily ABM06_20905 PF00132 Bacterial transferase hexapeptide (six repeats) ABM06_20910 PF03692 Putative zinc- or iron-chelating domain ABM06_20915 PF00920 Dehydratase family ABM06_20920 PF00589 Phage integrase family ABM06_20920 PF13495 Phage integrase, N-terminal SAM-like domain ABM06_20925 PF05598 Transposase domain (DUF772) ABM06_20950 PF01218 Coproporphyrinogen III oxidase ABM06_20955 PF01612 3'-5' exonuclease ABM06_20955 PF01367 5'-3' exonuclease, C-terminal SAM fold ABM06_20955 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ABM06_20955 PF00476 DNA polymerase family A ABM06_20965 PF13683 Integrase core domain ABM06_20965 PF13276 HTH-like domain ABM06_20980 PF00456 Transketolase, thiamine diphosphate binding domain ABM06_20980 PF17831 Pyruvate dehydrogenase E1 component middle domain ABM06_21005 PF03377 TAL effector repeat ABM06_21015 PF05598 Transposase domain (DUF772) ABM06_21055 PF04264 YceI-like domain ABM06_21060 PF00881 Nitroreductase family ABM06_21090 PF02592 Putative vitamin uptake transporter ABM06_21095 PF03710 Glutamate-ammonia ligase adenylyltransferase ABM06_21095 PF08335 GlnD PII-uridylyltransferase ABM06_21105 PF08450 SMP-30/Gluconolactonase/LRE-like region ABM06_21150 PF00793 DAHP synthetase I family ABM06_21160 PF00593 TonB dependent receptor ABM06_21160 PF07715 TonB-dependent Receptor Plug Domain ABM06_21170 PF00118 TCP-1/cpn60 chaperonin family ABM06_21175 PF00166 Chaperonin 10 Kd subunit ABM06_21205 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABM06_21215 PF04542 Sigma-70 region 2 ABM06_21215 PF04545 Sigma-70, region 4 ABM06_21220 PF03167 Uracil DNA glycosylase superfamily ABM06_21225 PF00072 Response regulator receiver domain ABM06_21225 PF01339 CheB methylesterase ABM06_21230 PF18075 FtsX extracellular domain ABM06_21235 PF00005 ABC transporter ABM06_21240 PF00271 Helicase conserved C-terminal domain ABM06_21240 PF00270 DEAD/DEAH box helicase ABM06_21240 PF12300 ATP-dependent RNA helicase RhlB ABM06_21245 PF00085 Thioredoxin ABM06_21250 PF07497 Rho termination factor, RNA-binding domain ABM06_21250 PF07498 Rho termination factor, N-terminal domain ABM06_21250 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABM06_21270 PF17243 POTRA domain TamA domain 1 ABM06_21270 PF01103 Surface antigen ABM06_21275 PF04357 TamB, inner membrane protein subunit of TAM complex ABM06_21305 PF07977 FabA-like domain ABM06_21310 PF01553 Acyltransferase ABM06_21320 PF00550 Phosphopantetheine attachment site ABM06_21325 PF04820 Tryptophan halogenase ABM06_21375 PF01638 HxlR-like helix-turn-helix ABM06_21380 PF05368 NmrA-like family ABM06_21395 PF03812 2-keto-3-deoxygluconate permease ABM06_21400 PF08267 Cobalamin-independent synthase, N-terminal domain ABM06_21400 PF01717 Cobalamin-independent synthase, Catalytic domain ABM06_21410 PF03358 NADPH-dependent FMN reductase ABM06_21415 PF03466 LysR substrate binding domain ABM06_21415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABM06_21420 PF02677 Epoxyqueuosine reductase QueH ABM06_21430 PF00512 His Kinase A (phospho-acceptor) domain ABM06_21430 PF00672 HAMP domain ABM06_21430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABM06_21435 PF00672 HAMP domain ABM06_21435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABM06_21435 PF00512 His Kinase A (phospho-acceptor) domain ABM06_21440 PF00072 Response regulator receiver domain ABM06_21440 PF00486 Transcriptional regulatory protein, C terminal ABM06_21445 PF00551 Formyl transferase ABM06_21455 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ABM06_21455 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ABM06_21460 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABM06_21465 PF02146 Sir2 family ABM06_21475 PF07690 Major Facilitator Superfamily ABM06_21480 PF03466 LysR substrate binding domain ABM06_21480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABM06_21490 PF01026 TatD related DNase ABM06_21520 PF13340 Putative transposase of IS4/5 family (DUF4096) ABM06_21540 PF00266 Aminotransferase class-V ABM06_21555 PF09349 OHCU decarboxylase ABM06_21555 PF01014 Uricase ABM06_21595 PF13936 Helix-turn-helix domain ABM06_21595 PF00665 Integrase core domain ABM06_21600 PF00326 Prolyl oligopeptidase family ABM06_21605 PF00364 Biotin-requiring enzyme ABM06_21605 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABM06_21605 PF00289 Biotin carboxylase, N-terminal domain ABM06_21605 PF02785 Biotin carboxylase C-terminal domain ABM06_21610 PF01039 Carboxyl transferase domain ABM06_21615 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABM06_21615 PF02770 Acyl-CoA dehydrogenase, middle domain ABM06_21615 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABM06_21670 PF07683 Cobalamin synthesis protein cobW C-terminal domain ABM06_21670 PF02492 CobW/HypB/UreG, nucleotide-binding domain ABM06_21700 PF03969 AFG1-like ATPase ABM06_21705 PF03412 Peptidase C39 family ABM06_21705 PF00005 ABC transporter ABM06_21705 PF00664 ABC transporter transmembrane region ABM06_21715 PF07715 TonB-dependent Receptor Plug Domain ABM06_21715 PF00593 TonB dependent receptor ABM06_21720 PF13181 Tetratricopeptide repeat ABM06_21725 PF02092 Glycyl-tRNA synthetase beta subunit ABM06_21725 PF05746 DALR anticodon binding domain ABM06_21730 PF02091 Glycyl-tRNA synthetase alpha subunit ABM06_21735 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ABM06_21735 PF00437 Type II/IV secretion system protein ABM06_21750 PF00117 Glutamine amidotransferase class-I ABM06_21750 PF00958 GMP synthase C terminal domain ABM06_21760 PF00902 Sec-independent protein translocase protein (TatC) ABM06_21765 PF02416 mttA/Hcf106 family ABM06_21770 PF02416 mttA/Hcf106 family ABM06_21780 PF00762 Ferrochelatase ABM06_21785 PF12697 Alpha/beta hydrolase family ABM06_21800 PF04381 Putative exonuclease, RdgC ABM06_21805 PF01171 PP-loop family ABM06_21815 PF00356 Bacterial regulatory proteins, lacI family ABM06_21820 PF07488 Glycosyl hydrolase family 67 middle domain ABM06_21820 PF03648 Glycosyl hydrolase family 67 N-terminus ABM06_21820 PF07477 Glycosyl hydrolase family 67 C-terminus ABM06_21830 PF13378 Enolase C-terminal domain-like ABM06_21830 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ABM06_21835 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain ABM06_21835 PF04616 Glycosyl hydrolases family 43 ABM06_21840 PF14310 Fibronectin type III-like domain ABM06_21840 PF07691 PA14 domain ABM06_21840 PF01915 Glycosyl hydrolase family 3 C-terminal domain ABM06_21840 PF00933 Glycosyl hydrolase family 3 N terminal domain ABM06_21845 PF01232 Mannitol dehydrogenase Rossmann domain ABM06_21845 PF08125 Mannitol dehydrogenase C-terminal domain ABM06_21865 PF02614 Glucuronate isomerase ABM06_21870 PF00553 Cellulose binding domain ABM06_21870 PF03422 Carbohydrate binding module (family 6) ABM06_21870 PF00331 Glycosyl hydrolase family 10 ABM06_21875 PF00553 Cellulose binding domain ABM06_21875 PF03422 Carbohydrate binding module (family 6) ABM06_21875 PF00331 Glycosyl hydrolase family 10 ABM06_21900 PF04616 Glycosyl hydrolases family 43 ABM06_21925 PF13340 Putative transposase of IS4/5 family (DUF4096) ABM06_21940 PF00487 Fatty acid desaturase ABM06_21945 PF00970 Oxidoreductase FAD-binding domain ABM06_21945 PF00175 Oxidoreductase NAD-binding domain ABM06_21945 PF00111 2Fe-2S iron-sulfur cluster binding domain ABM06_21950 PF00440 Bacterial regulatory proteins, tetR family ABM06_21985 PF01047 MarR family ABM06_21990 PF02566 OsmC-like protein ABM06_22070 PF01381 Helix-turn-helix ABM06_22075 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB ABM06_22080 PF13538 UvrD-like helicase C-terminal domain ABM06_22085 PF13361 UvrD-like helicase C-terminal domain ABM06_22085 PF00580 UvrD/REP helicase N-terminal domain ABM06_22085 PF12705 PD-(D/E)XK nuclease superfamily ABM06_22090 PF17946 RecC C-terminal domain ABM06_22130 PF00080 Copper/zinc superoxide dismutase (SODC) ABM06_22135 PF00080 Copper/zinc superoxide dismutase (SODC) ABM06_22140 PF00158 Sigma-54 interaction domain ABM06_22140 PF02954 Bacterial regulatory protein, Fis family ABM06_22140 PF00072 Response regulator receiver domain ABM06_22145 PF00989 PAS fold ABM06_22145 PF00512 His Kinase A (phospho-acceptor) domain ABM06_22145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABM06_22150 PF00909 Ammonium Transporter Family ABM06_22155 PF00543 Nitrogen regulatory protein P-II ABM06_22160 PF00120 Glutamine synthetase, catalytic domain ABM06_22160 PF03951 Glutamine synthetase, beta-Grasp domain ABM06_22165 PF02673 Bacitracin resistance protein BacA ABM06_22205 PF03061 Thioesterase superfamily ABM06_22210 PF13091 PLD-like domain ABM06_22225 PF10609 NUBPL iron-transfer P-loop NTPase ABM06_22225 PF01883 Iron-sulfur cluster assembly protein ABM06_22250 PF01381 Helix-turn-helix ABM06_22255 PF13657 HipA N-terminal domain ABM06_22255 PF07804 HipA-like C-terminal domain ABM06_22260 PF10017 Histidine-specific methyltransferase, SAM-dependent ABM06_22265 PF03781 Sulfatase-modifying factor enzyme 1 ABM06_22265 PF12867 DinB superfamily ABM06_22280 PF00528 Binding-protein-dependent transport system inner membrane component ABM06_22285 PF00571 CBS domain ABM06_22285 PF00005 ABC transporter ABM06_22300 PF00005 ABC transporter ABM06_22310 PF01734 Patatin-like phospholipase ABM06_22325 PF01609 Transposase DDE domain ABM06_22325 PF05598 Transposase domain (DUF772) ABM06_22330 PF13683 Integrase core domain ABM06_22330 PF13276 HTH-like domain ABM06_22335 PF01527 Transposase ABM06_22350 PF00248 Aldo/keto reductase family ABM06_22355 PF16884 N-terminal domain of oxidoreductase ABM06_22355 PF00107 Zinc-binding dehydrogenase ABM06_22360 PF00248 Aldo/keto reductase family ABM06_22370 PF00849 RNA pseudouridylate synthase ABM06_22385 PF04408 Helicase associated domain (HA2) ABM06_22385 PF00270 DEAD/DEAH box helicase ABM06_22385 PF08482 ATP-dependent helicase C-terminal ABM06_22385 PF00271 Helicase conserved C-terminal domain ABM06_22390 PF07308 Protein of unknown function (DUF1456) ABM06_22395 PF13378 Enolase C-terminal domain-like ABM06_22395 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ABM06_22400 PF01557 Fumarylacetoacetate (FAA) hydrolase family ABM06_22415 PF00248 Aldo/keto reductase family ABM06_22425 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain ABM06_22425 PF04616 Glycosyl hydrolases family 43 ABM06_22445 PF00072 Response regulator receiver domain ABM06_22445 PF00196 Bacterial regulatory proteins, luxR family ABM06_22450 PF16177 Acetyl-coenzyme A synthetase N-terminus ABM06_22450 PF13193 AMP-binding enzyme C-terminal domain ABM06_22450 PF00501 AMP-binding enzyme ABM06_22465 PF04341 Protein of unknown function, DUF485 ABM06_22470 PF00474 Sodium:solute symporter family ABM06_22480 PF03372 Endonuclease/Exonuclease/phosphatase family ABM06_22490 PF04226 Transglycosylase associated protein ABM06_22495 PF01648 4'-phosphopantetheinyl transferase superfamily ABM06_22500 PF09423 PhoD-like phosphatase ABM06_22500 PF16655 PhoD-like phosphatase, N-terminal domain ABM06_22505 PF09423 PhoD-like phosphatase ABM06_22505 PF16655 PhoD-like phosphatase, N-terminal domain ABM06_22510 PF02527 rRNA small subunit methyltransferase G ABM06_22525 PF00830 Ribosomal L28 family ABM06_22530 PF00471 Ribosomal protein L33 ABM06_22550 PF04303 PrpF protein ABM06_22555 PF03737 Aldolase/RraA ABM06_22560 PF03466 LysR substrate binding domain ABM06_22560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABM06_22565 PF13396 Phospholipase_D-nuclease N-terminal ABM06_22565 PF13091 PLD-like domain ABM06_22580 PF00580 UvrD/REP helicase N-terminal domain ABM06_22580 PF13361 UvrD-like helicase C-terminal domain ABM06_22595 PF13520 Amino acid permease ABM06_22600 PF02646 RmuC family ABM06_22610 PF00255 Glutathione peroxidase ABM06_22620 PF05598 Transposase domain (DUF772) ABM06_22635 PF04055 Radical SAM superfamily ABM06_22645 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) ABM06_22660 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABM06_22660 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABM06_22665 PF03572 Peptidase family S41 ABM06_22665 PF13180 PDZ domain ABM06_22670 PF01551 Peptidase family M23 ABM06_22680 PF04389 Peptidase family M28 ABM06_22695 PF05598 Transposase domain (DUF772) ABM06_22730 PF02463 RecF/RecN/SMC N terminal domain ABM06_22735 PF01227 GTP cyclohydrolase I ABM06_22760 PF00083 Sugar (and other) transporter ABM06_22835 PF02595 Glycerate kinase family ABM06_22840 PF07690 Major Facilitator Superfamily ABM06_22855 PF17785 PUA-like domain ABM06_22855 PF10672 S-adenosylmethionine-dependent methyltransferase ABM06_22860 PF03741 Integral membrane protein TerC family ABM06_22865 PF01694 Rhomboid family ABM06_22870 PF03009 Glycerophosphoryl diester phosphodiesterase family ABM06_22880 PF01569 PAP2 superfamily ABM06_22885 PF10396 GTP-binding protein TrmE N-terminus ABM06_22885 PF01926 50S ribosome-binding GTPase ABM06_22885 PF12631 MnmE helical domain ABM06_22890 PF01522 Polysaccharide deacetylase ABM06_22895 PF14849 YidC periplasmic domain ABM06_22895 PF02096 60Kd inner membrane protein ABM06_22900 PF00825 Ribonuclease P ABM06_22905 PF00468 Ribosomal protein L34