locus-tag class description BO993_00110 PF01609 Transposase DDE domain BO993_00110 PF05598 Transposase domain (DUF772) BO993_00150 PF05598 Transposase domain (DUF772) BO993_00150 PF01609 Transposase DDE domain BO993_00155 PF01555 DNA methylase BO993_00210 PF00182 Chitinase class I BO993_00375 PF07963 Prokaryotic N-terminal methylation motif BO993_00375 PF00114 Pilin (bacterial filament) BO993_00380 PF05567 Neisseria PilC beta-propeller domain BO993_00400 PF12019 Type II transport protein GspH BO993_00400 PF07963 Prokaryotic N-terminal methylation motif BO993_00405 PF11892 Domain of unknown function (DUF3412) BO993_00405 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases BO993_00405 PF03641 Possible lysine decarboxylase BO993_00410 PF00593 TonB dependent receptor BO993_00420 PF01914 MarC family integral membrane protein BO993_00430 PF00462 Glutaredoxin BO993_00435 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BO993_00435 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BO993_00440 PF02222 ATP-grasp domain BO993_00440 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BO993_00445 PF00731 AIR carboxylase BO993_00455 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BO993_00455 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BO993_00465 PF00575 S1 RNA binding domain BO993_00465 PF03725 3' exoribonuclease family, domain 2 BO993_00465 PF01138 3' exoribonuclease family, domain 1 BO993_00465 PF00013 KH domain BO993_00465 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BO993_00470 PF00312 Ribosomal protein S15 BO993_00475 PF16198 tRNA pseudouridylate synthase B C-terminal domain BO993_00475 PF09157 Pseudouridine synthase II TruB, C-terminal BO993_00475 PF01509 TruB family pseudouridylate synthase (N terminal domain) BO993_00480 PF02033 Ribosome-binding factor A BO993_00485 PF00009 Elongation factor Tu GTP binding domain BO993_00485 PF11987 Translation-initiation factor 2 BO993_00485 PF08364 Bacterial translation initiation factor IF-2 associated region BO993_00485 PF04760 Translation initiation factor IF-2, N-terminal region BO993_00490 PF00575 S1 RNA binding domain BO993_00490 PF08529 NusA N-terminal domain BO993_00490 PF13184 NusA-like KH domain BO993_00495 PF17384 RimP C-terminal SH3 domain BO993_00495 PF02576 RimP N-terminal domain BO993_00505 PF00361 Proton-conducting membrane transporter BO993_00510 PF00361 Proton-conducting membrane transporter BO993_00510 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus BO993_00515 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BO993_00515 PF00361 Proton-conducting membrane transporter BO993_00520 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BO993_00525 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 BO993_00530 PF12838 4Fe-4S dicluster domain BO993_00535 PF00146 NADH dehydrogenase BO993_00540 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal BO993_00540 PF00384 Molybdopterin oxidoreductase BO993_00540 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BO993_00545 PF10531 SLBB domain BO993_00545 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BO993_00545 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BO993_00555 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BO993_00560 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BO993_00565 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BO993_00570 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 BO993_00585 PF00121 Triosephosphate isomerase BO993_00610 PF13340 Putative transposase of IS4/5 family (DUF4096) BO993_00625 PF00990 Diguanylate cyclase, GGDEF domain BO993_00625 PF03707 Bacterial signalling protein N terminal repeat BO993_00625 PF00563 EAL domain BO993_00640 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BO993_00640 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BO993_00640 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BO993_00640 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BO993_00645 PF17848 Acetyl-coA carboxylase zinc finger domain BO993_00645 PF01039 Carboxyl transferase domain BO993_00655 PF00290 Tryptophan synthase alpha chain BO993_00665 PF00291 Pyridoxal-phosphate dependent enzyme BO993_00670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BO993_00670 PF03466 LysR substrate binding domain BO993_00675 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BO993_00680 PF01416 tRNA pseudouridine synthase BO993_00700 PF02774 Semialdehyde dehydrogenase, dimerisation domain BO993_00700 PF01118 Semialdehyde dehydrogenase, NAD binding domain BO993_00705 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BO993_00705 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BO993_00710 PF01264 Chorismate synthase BO993_00715 PF05175 Methyltransferase small domain BO993_00720 PF02630 SCO1/SenC BO993_00725 PF02666 Phosphatidylserine decarboxylase BO993_00740 PF05872 Bacterial protein of unknown function (DUF853) BO993_00760 PF01272 Transcription elongation factor, GreA/GreB, C-term BO993_00760 PF03449 Transcription elongation factor, N-terminal BO993_00765 PF04055 Radical SAM superfamily BO993_00765 PF00919 Uncharacterized protein family UPF0004 BO993_00765 PF18693 TRAM domain BO993_00770 PF01738 Dienelactone hydrolase family BO993_00785 PF00692 dUTPase BO993_00790 PF10609 NUBPL iron-transfer P-loop NTPase BO993_00825 PF01266 FAD dependent oxidoreductase BO993_00830 PF04235 Protein of unknown function (DUF418) BO993_00835 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BO993_00840 PF00877 NlpC/P60 family BO993_00845 PF00877 NlpC/P60 family BO993_00860 PF00375 Sodium:dicarboxylate symporter family BO993_00865 PF00245 Alkaline phosphatase BO993_00870 PF11734 TilS substrate C-terminal domain BO993_00870 PF09179 TilS substrate binding domain BO993_00870 PF01171 PP-loop family BO993_00875 PF02609 Exonuclease VII small subunit BO993_00880 PF00348 Polyprenyl synthetase BO993_00900 PF01523 Putative modulator of DNA gyrase BO993_00905 PF04751 Protein of unknown function (DUF615) BO993_00910 PF01523 Putative modulator of DNA gyrase BO993_00920 PF13116 Protein of unknown function BO993_00920 PF13502 AsmA-like C-terminal region BO993_00925 PF00575 S1 RNA binding domain BO993_00925 PF10150 Ribonuclease E/G family BO993_00930 PF02545 Maf-like protein BO993_00935 PF04402 Protein of unknown function (DUF541) BO993_00965 PF02590 Predicted SPOUT methyltransferase BO993_00985 PF01467 Cytidylyltransferase-like BO993_01000 PF00133 tRNA synthetases class I (I, L, M and V) BO993_01000 PF13603 Leucyl-tRNA synthetase, Domain 2 BO993_01000 PF08264 Anticodon-binding domain of tRNA BO993_01010 PF00085 Thioredoxin BO993_01055 PF13340 Putative transposase of IS4/5 family (DUF4096) BO993_01070 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BO993_01070 PF00128 Alpha amylase, catalytic domain BO993_01110 PF13683 Integrase core domain BO993_01110 PF13276 HTH-like domain BO993_01115 PF01527 Transposase BO993_01140 PF00657 GDSL-like Lipase/Acylhydrolase BO993_01140 PF03797 Autotransporter beta-domain BO993_01150 PF05690 Thiazole biosynthesis protein ThiG BO993_01155 PF02390 Putative methyltransferase BO993_01160 PF03600 Citrate transporter BO993_01160 PF02080 TrkA-C domain BO993_01175 PF05598 Transposase domain (DUF772) BO993_01190 PF01557 Fumarylacetoacetate (FAA) hydrolase family BO993_01195 PF01741 Large-conductance mechanosensitive channel, MscL BO993_01210 PF00135 Carboxylesterase family BO993_01215 PF08032 RNA 2'-O ribose methyltransferase substrate binding BO993_01215 PF00588 SpoU rRNA Methylase family BO993_01245 PF01433 Peptidase family M1 domain BO993_01245 PF11838 ERAP1-like C-terminal domain BO993_01250 PF00873 AcrB/AcrD/AcrF family BO993_01255 PF00529 HlyD membrane-fusion protein of T1SS BO993_01255 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BO993_01260 PF01609 Transposase DDE domain BO993_01260 PF05598 Transposase domain (DUF772) BO993_01270 PF00009 Elongation factor Tu GTP binding domain BO993_01275 PF01507 Phosphoadenosine phosphosulfate reductase family BO993_01280 PF00175 Oxidoreductase NAD-binding domain BO993_01280 PF00258 Flavodoxin BO993_01280 PF00667 FAD binding domain BO993_01285 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BO993_01285 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BO993_01290 PF01507 Phosphoadenosine phosphosulfate reductase family BO993_01310 PF01627 Hpt domain BO993_01310 PF00512 His Kinase A (phospho-acceptor) domain BO993_01310 PF00672 HAMP domain BO993_01310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BO993_01310 PF00072 Response regulator receiver domain BO993_01335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BO993_01335 PF03466 LysR substrate binding domain BO993_01340 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BO993_01340 PF10414 Sirohaem synthase dimerisation region BO993_01340 PF14824 Sirohaem biosynthesis protein central BO993_01345 PF00291 Pyridoxal-phosphate dependent enzyme BO993_01355 PF01661 Macro domain BO993_01360 PF00274 Fructose-bisphosphate aldolase class-I BO993_01365 PF00224 Pyruvate kinase, barrel domain BO993_01365 PF02887 Pyruvate kinase, alpha/beta domain BO993_01375 PF00162 Phosphoglycerate kinase BO993_01405 PF06628 Catalase-related immune-responsive BO993_01405 PF18011 C-terminal domain found in long catalases BO993_01405 PF00199 Catalase BO993_01430 PF02311 AraC-like ligand binding domain BO993_01430 PF12833 Helix-turn-helix domain BO993_01455 PF07676 WD40-like Beta Propeller Repeat BO993_01455 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region BO993_01455 PF00326 Prolyl oligopeptidase family BO993_01480 PF03169 OPT oligopeptide transporter protein BO993_01495 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BO993_01495 PF14579 Helix-hairpin-helix motif BO993_01495 PF02811 PHP domain BO993_01495 PF07733 Bacterial DNA polymerase III alpha NTPase domain BO993_01510 PF01726 LexA DNA binding domain BO993_01510 PF00717 Peptidase S24-like BO993_01540 PF00300 Histidine phosphatase superfamily (branch 1) BO993_01540 PF13456 Reverse transcriptase-like BO993_01580 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) BO993_01580 PF18766 SWI2/SNF2 ATPase BO993_01580 PF11867 Domain of unknown function (DUF3387) BO993_01595 PF01909 Nucleotidyltransferase domain BO993_01600 PF08780 Nucleotidyltransferase substrate binding protein like BO993_01605 PF02384 N-6 DNA Methylase BO993_01625 PF00271 Helicase conserved C-terminal domain BO993_01625 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) BO993_01625 PF04851 Type III restriction enzyme, res subunit BO993_01625 PF08463 EcoEI R protein C-terminal BO993_01635 PF02384 N-6 DNA Methylase BO993_01640 PF01420 Type I restriction modification DNA specificity domain BO993_01680 PF01609 Transposase DDE domain BO993_01680 PF05598 Transposase domain (DUF772) BO993_01690 PF01609 Transposase DDE domain BO993_01690 PF05598 Transposase domain (DUF772) BO993_01730 PF16671 Actin cross-linking domain BO993_01730 PF04717 Type VI secretion system, phage-baseplate injector BO993_01740 PF00004 ATPase family associated with various cellular activities (AAA) BO993_01740 PF10431 C-terminal, D2-small domain, of ClpB protein BO993_01740 PF07724 AAA domain (Cdc48 subfamily) BO993_01740 PF17871 AAA lid domain BO993_01800 PF00182 Chitinase class I BO993_01805 PF05598 Transposase domain (DUF772) BO993_01820 PF04717 Type VI secretion system, phage-baseplate injector BO993_01820 PF16671 Actin cross-linking domain BO993_01860 PF03781 Sulfatase-modifying factor enzyme 1 BO993_01870 PF03781 Sulfatase-modifying factor enzyme 1 BO993_01880 PF03781 Sulfatase-modifying factor enzyme 1 BO993_01945 PF00691 OmpA family BO993_01945 PF04972 BON domain BO993_01985 PF02222 ATP-grasp domain BO993_02010 PF00730 HhH-GPD superfamily base excision DNA repair protein BO993_02025 PF00196 Bacterial regulatory proteins, luxR family BO993_02025 PF00072 Response regulator receiver domain BO993_02030 PF07730 Histidine kinase BO993_02040 PF05209 Septum formation inhibitor MinC, N-terminal domain BO993_02040 PF03775 Septum formation inhibitor MinC, C-terminal domain BO993_02045 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BO993_02050 PF03776 Septum formation topological specificity factor MinE BO993_02060 PF08521 Two-component sensor kinase N-terminal BO993_02060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BO993_02060 PF00512 His Kinase A (phospho-acceptor) domain BO993_02065 PF00072 Response regulator receiver domain BO993_02065 PF00486 Transcriptional regulatory protein, C terminal BO993_02070 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase BO993_02080 PF00884 Sulfatase BO993_02080 PF08019 Phosphoethanolamine transferase EptA/EptB BO993_02100 PF00664 ABC transporter transmembrane region BO993_02100 PF00005 ABC transporter BO993_02100 PF03412 Peptidase C39 family BO993_02120 PF02347 Glycine cleavage system P-protein BO993_02150 PF13276 HTH-like domain BO993_02150 PF13683 Integrase core domain BO993_02180 PF01196 Ribosomal protein L17 BO993_02185 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BO993_02185 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BO993_02185 PF01000 RNA polymerase Rpb3/RpoA insert domain BO993_02190 PF00163 Ribosomal protein S4/S9 N-terminal domain BO993_02190 PF01479 S4 domain BO993_02195 PF00411 Ribosomal protein S11 BO993_02200 PF00416 Ribosomal protein S13/S18 BO993_02205 PF00344 SecY translocase BO993_02210 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BO993_02215 PF00327 Ribosomal protein L30p/L7e BO993_02220 PF00333 Ribosomal protein S5, N-terminal domain BO993_02220 PF03719 Ribosomal protein S5, C-terminal domain BO993_02225 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BO993_02230 PF00347 Ribosomal protein L6 BO993_02235 PF00410 Ribosomal protein S8 BO993_02240 PF00253 Ribosomal protein S14p/S29e BO993_02245 PF00673 ribosomal L5P family C-terminus BO993_02245 PF00281 Ribosomal protein L5 BO993_02250 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BO993_02250 PF00467 KOW motif BO993_02255 PF00238 Ribosomal protein L14p/L23e BO993_02260 PF00366 Ribosomal protein S17 BO993_02265 PF00831 Ribosomal L29 protein BO993_02270 PF00252 Ribosomal protein L16p/L10e BO993_02275 PF00189 Ribosomal protein S3, C-terminal domain BO993_02275 PF07650 KH domain BO993_02280 PF00237 Ribosomal protein L22p/L17e BO993_02285 PF00203 Ribosomal protein S19 BO993_02290 PF03947 Ribosomal Proteins L2, C-terminal domain BO993_02290 PF00181 Ribosomal Proteins L2, RNA binding domain BO993_02295 PF00276 Ribosomal protein L23 BO993_02300 PF00573 Ribosomal protein L4/L1 family BO993_02305 PF00297 Ribosomal protein L3 BO993_02310 PF00338 Ribosomal protein S10p/S20e BO993_02320 PF00009 Elongation factor Tu GTP binding domain BO993_02320 PF03144 Elongation factor Tu domain 2 BO993_02320 PF03143 Elongation factor Tu C-terminal domain BO993_02325 PF00679 Elongation factor G C-terminus BO993_02325 PF00009 Elongation factor Tu GTP binding domain BO993_02325 PF03764 Elongation factor G, domain IV BO993_02325 PF14492 Elongation Factor G, domain II BO993_02325 PF03144 Elongation factor Tu domain 2 BO993_02330 PF00177 Ribosomal protein S7p/S5e BO993_02335 PF00164 Ribosomal protein S12/S23 BO993_02340 PF05000 RNA polymerase Rpb1, domain 4 BO993_02340 PF04998 RNA polymerase Rpb1, domain 5 BO993_02340 PF00623 RNA polymerase Rpb1, domain 2 BO993_02340 PF04997 RNA polymerase Rpb1, domain 1 BO993_02340 PF04983 RNA polymerase Rpb1, domain 3 BO993_02345 PF00562 RNA polymerase Rpb2, domain 6 BO993_02345 PF04563 RNA polymerase beta subunit BO993_02345 PF04565 RNA polymerase Rpb2, domain 3 BO993_02345 PF04561 RNA polymerase Rpb2, domain 2 BO993_02345 PF10385 RNA polymerase beta subunit external 1 domain BO993_02345 PF04560 RNA polymerase Rpb2, domain 7 BO993_02350 PF16320 Ribosomal protein L7/L12 dimerisation domain BO993_02350 PF00542 Ribosomal protein L7/L12 C-terminal domain BO993_02355 PF00466 Ribosomal protein L10 BO993_02360 PF00687 Ribosomal protein L1p/L10e family BO993_02365 PF03946 Ribosomal protein L11, N-terminal domain BO993_02365 PF00298 Ribosomal protein L11, RNA binding domain BO993_02370 PF00467 KOW motif BO993_02370 PF02357 Transcription termination factor nusG BO993_02375 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BO993_02385 PF03143 Elongation factor Tu C-terminal domain BO993_02385 PF00009 Elongation factor Tu GTP binding domain BO993_02385 PF03144 Elongation factor Tu domain 2 BO993_02405 PF01926 50S ribosome-binding GTPase BO993_02405 PF06071 Protein of unknown function (DUF933) BO993_02410 PF01195 Peptidyl-tRNA hydrolase BO993_02415 PF01386 Ribosomal L25p family BO993_02415 PF14693 Ribosomal protein TL5, C-terminal domain BO993_02420 PF14572 Phosphoribosyl synthetase-associated domain BO993_02420 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BO993_02430 PF08544 GHMP kinases C terminal BO993_02430 PF00288 GHMP kinases N terminal domain BO993_02435 PF03550 Outer membrane lipoprotein LolB BO993_02445 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BO993_02445 PF01488 Shikimate / quinate 5-dehydrogenase BO993_02445 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BO993_02450 PF00472 RF-1 domain BO993_02450 PF03462 PCRF domain BO993_02460 PF00994 Probable molybdopterin binding domain BO993_02465 PF03976 Polyphosphate kinase 2 (PPK2) BO993_02475 PF00708 Acylphosphatase BO993_02480 PF08534 Redoxin BO993_02485 PF03631 Virulence factor BrkB BO993_02490 PF03358 NADPH-dependent FMN reductase BO993_02505 PF17189 Glycosyl hydrolase family 30 beta sandwich domain BO993_02505 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain BO993_02515 PF04073 Aminoacyl-tRNA editing domain BO993_02525 PF01063 Amino-transferase class IV BO993_02550 PF02233 NAD(P) transhydrogenase beta subunit BO993_02555 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch BO993_02575 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BO993_02575 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch BO993_02575 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BO993_02590 PF01612 3'-5' exonuclease BO993_02590 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BO993_02590 PF01367 5'-3' exonuclease, C-terminal SAM fold BO993_02590 PF00476 DNA polymerase family A BO993_02595 PF00293 NUDIX domain BO993_02605 PF00561 alpha/beta hydrolase fold BO993_02630 PF17827 PrmC N-terminal domain BO993_02630 PF05175 Methyltransferase small domain BO993_02635 PF00578 AhpC/TSA family BO993_02635 PF10417 C-terminal domain of 1-Cys peroxiredoxin BO993_02640 PF07992 Pyridine nucleotide-disulphide oxidoreductase BO993_02640 PF13192 Thioredoxin domain BO993_02645 PF03466 LysR substrate binding domain BO993_02645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BO993_02650 PF03449 Transcription elongation factor, N-terminal BO993_02650 PF01272 Transcription elongation factor, GreA/GreB, C-term BO993_02655 PF00923 Transaldolase/Fructose-6-phosphate aldolase BO993_02685 PF01625 Peptide methionine sulfoxide reductase BO993_02720 PF03009 Glycerophosphoryl diester phosphodiesterase family BO993_02725 PF13340 Putative transposase of IS4/5 family (DUF4096) BO993_02765 PF00043 Glutathione S-transferase, C-terminal domain BO993_02765 PF02798 Glutathione S-transferase, N-terminal domain BO993_02795 PF01474 Class-II DAHP synthetase family BO993_02805 PF02600 Disulfide bond formation protein DsbB BO993_02865 PF05598 Transposase domain (DUF772) BO993_02905 PF13340 Putative transposase of IS4/5 family (DUF4096) BO993_02940 PF01062 Bestrophin, RFP-TM, chloride channel BO993_02950 PF08245 Mur ligase middle domain BO993_02950 PF02875 Mur ligase family, glutamate ligase domain BO993_02950 PF01225 Mur ligase family, catalytic domain BO993_02960 PF00365 Phosphofructokinase BO993_02995 PF00719 Inorganic pyrophosphatase BO993_03010 PF07715 TonB-dependent Receptor Plug Domain BO993_03010 PF00593 TonB dependent receptor BO993_03015 PF12833 Helix-turn-helix domain BO993_03020 PF18500 CadC C-terminal domain 1 BO993_03020 PF00486 Transcriptional regulatory protein, C terminal BO993_03025 PF13667 ThiC-associated domain BO993_03025 PF01964 Radical SAM ThiC family BO993_03035 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BO993_03035 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BO993_03040 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BO993_03040 PF00205 Thiamine pyrophosphate enzyme, central domain BO993_03040 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BO993_03050 PF00291 Pyridoxal-phosphate dependent enzyme BO993_03055 PF00682 HMGL-like BO993_03055 PF08502 LeuA allosteric (dimerisation) domain BO993_03060 PF00180 Isocitrate/isopropylmalate dehydrogenase BO993_03065 PF08241 Methyltransferase domain BO993_03070 PF00694 Aconitase C-terminal domain BO993_03075 PF00330 Aconitase family (aconitate hydratase) BO993_03080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BO993_03115 PF02321 Outer membrane efflux protein BO993_03120 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) BO993_03125 PF03279 Bacterial lipid A biosynthesis acyltransferase BO993_03145 PF13276 HTH-like domain BO993_03170 PF05598 Transposase domain (DUF772) BO993_03180 PF01433 Peptidase family M1 domain BO993_03180 PF11838 ERAP1-like C-terminal domain BO993_03185 PF00709 Adenylosuccinate synthetase BO993_03195 PF01145 SPFH domain / Band 7 family BO993_03200 PF12221 Bacterial membrane protein N terminal BO993_03200 PF01145 SPFH domain / Band 7 family BO993_03205 PF00072 Response regulator receiver domain BO993_03210 PF00226 DnaJ domain BO993_03210 PF01556 DnaJ C terminal domain BO993_03220 PF08534 Redoxin BO993_03230 PF00665 Integrase core domain BO993_03230 PF13936 Helix-turn-helix domain BO993_03275 PF07715 TonB-dependent Receptor Plug Domain BO993_03275 PF00593 TonB dependent receptor BO993_03285 PF04303 PrpF protein BO993_03290 PF00330 Aconitase family (aconitate hydratase) BO993_03290 PF00694 Aconitase C-terminal domain BO993_03295 PF00285 Citrate synthase, C-terminal domain BO993_03305 PF00158 Sigma-54 interaction domain BO993_03305 PF06506 Propionate catabolism activator BO993_03305 PF02954 Bacterial regulatory protein, Fis family BO993_03325 PF09115 DNA polymerase III, delta subunit, C terminal BO993_03330 PF02618 YceG-like family BO993_03335 PF04715 Anthranilate synthase component I, N terminal region BO993_03335 PF00425 chorismate binding enzyme BO993_03340 PF00109 Beta-ketoacyl synthase, N-terminal domain BO993_03340 PF02801 Beta-ketoacyl synthase, C-terminal domain BO993_03345 PF00550 Phosphopantetheine attachment site BO993_03355 PF00698 Acyl transferase domain BO993_03365 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BO993_03365 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BO993_03370 PF01783 Ribosomal L32p protein family BO993_03375 PF02620 Large ribosomal RNA subunit accumulation protein YceD BO993_03380 PF02545 Maf-like protein BO993_03390 PF05598 Transposase domain (DUF772) BO993_03390 PF01609 Transposase DDE domain BO993_03405 PF09704 CRISPR-associated protein (Cas_Cas5) BO993_03425 PF01867 CRISPR associated protein Cas1 BO993_03430 PF09827 CRISPR associated protein Cas2 BO993_03455 PF00593 TonB dependent receptor BO993_03455 PF07715 TonB-dependent Receptor Plug Domain BO993_03470 PF07702 UTRA domain BO993_03470 PF00392 Bacterial regulatory proteins, gntR family BO993_03485 PF00263 Bacterial type II and III secretion system protein BO993_03485 PF03958 Bacterial type II/III secretion system short domain BO993_03495 PF10741 Type II secretion system (T2SS), protein M subtype b BO993_03500 PF05137 Fimbrial assembly protein (PilN) BO993_03505 PF03934 Type II secretion system (T2SS), protein K BO993_03515 PF07963 Prokaryotic N-terminal methylation motif BO993_03520 PF12019 Type II transport protein GspH BO993_03525 PF08334 Type II secretion system (T2SS), protein G BO993_03530 PF00482 Type II secretion system (T2SS), protein F BO993_03540 PF00437 Type II/IV secretion system protein BO993_03540 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BO993_03550 PF05662 Coiled stalk of trimeric autotransporter adhesin BO993_03550 PF05658 Head domain of trimeric autotransporter adhesin BO993_03550 PF03895 YadA-like membrane anchor domain BO993_03550 PF13018 Extended Signal Peptide of Type V secretion system BO993_03555 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal BO993_03555 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BO993_03555 PF02769 AIR synthase related protein, C-terminal domain BO993_03565 PF13098 Thioredoxin-like domain BO993_03565 PF10411 Disulfide bond isomerase protein N-terminus BO993_03570 PF00589 Phage integrase family BO993_03570 PF02899 Phage integrase, N-terminal SAM-like domain BO993_03585 PF03739 Lipopolysaccharide export system permease LptF/LptG BO993_03595 PF02789 Cytosol aminopeptidase family, N-terminal domain BO993_03595 PF00883 Cytosol aminopeptidase family, catalytic domain BO993_03610 PF08264 Anticodon-binding domain of tRNA BO993_03610 PF00133 tRNA synthetases class I (I, L, M and V) BO993_03610 PF10458 Valyl tRNA synthetase tRNA binding arm BO993_03630 PF13683 Integrase core domain BO993_03630 PF13276 HTH-like domain BO993_03660 PF00544 Pectate lyase BO993_03665 PF01464 Transglycosylase SLT domain BO993_03665 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain BO993_03710 PF01066 CDP-alcohol phosphatidyltransferase BO993_03720 PF03129 Anticodon binding domain BO993_03720 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BO993_03720 PF04073 Aminoacyl-tRNA editing domain BO993_03725 PF00816 H-NS histone family BO993_03735 PF02405 Permease MlaE BO993_03740 PF00005 ABC transporter BO993_03745 PF02470 MlaD protein BO993_03745 PF03886 ABC-type transport auxiliary lipoprotein component BO993_03765 PF14307 Glycosyltransferase WbsX BO993_03765 PF05045 Rhamnan synthesis protein F BO993_03770 PF01144 Coenzyme A transferase BO993_03775 PF01144 Coenzyme A transferase BO993_03780 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BO993_03780 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BO993_03780 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BO993_03780 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BO993_03785 PF00483 Nucleotidyl transferase BO993_03785 PF01050 Mannose-6-phosphate isomerase BO993_03790 PF04321 RmlD substrate binding domain BO993_03795 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase BO993_03800 PF00483 Nucleotidyl transferase BO993_03805 PF16363 GDP-mannose 4,6 dehydratase BO993_03810 PF01012 Electron transfer flavoprotein domain BO993_03815 PF01012 Electron transfer flavoprotein domain BO993_03815 PF00766 Electron transfer flavoprotein FAD-binding domain BO993_03825 PF01040 UbiA prenyltransferase family BO993_03830 PF04030 D-arabinono-1,4-lactone oxidase BO993_03830 PF01565 FAD binding domain BO993_03835 PF00106 short chain dehydrogenase BO993_03840 PF13847 Methyltransferase domain BO993_03840 PF03551 Transcriptional regulator PadR-like family BO993_03845 PF01370 NAD dependent epimerase/dehydratase family BO993_03850 PF01593 Flavin containing amine oxidoreductase BO993_03885 PF00535 Glycosyl transferase family 2 BO993_03900 PF14524 Wzt C-terminal domain BO993_03900 PF00005 ABC transporter BO993_03910 PF01053 Cys/Met metabolism PLP-dependent enzyme BO993_03915 PF00571 CBS domain BO993_03915 PF00291 Pyridoxal-phosphate dependent enzyme BO993_03935 PF00437 Type II/IV secretion system protein BO993_03940 PF14497 Glutathione S-transferase, C-terminal domain BO993_03940 PF02798 Glutathione S-transferase, N-terminal domain BO993_03950 PF00271 Helicase conserved C-terminal domain BO993_03950 PF00270 DEAD/DEAH box helicase BO993_03960 PF01242 6-pyruvoyl tetrahydropterin synthase BO993_03975 PF13185 GAF domain BO993_03985 PF13419 Haloacid dehalogenase-like hydrolase BO993_03990 PF11799 impB/mucB/samB family C-terminal domain BO993_03990 PF00817 impB/mucB/samB family BO993_03995 PF07977 FabA-like domain BO993_04000 PF00109 Beta-ketoacyl synthase, N-terminal domain BO993_04000 PF02801 Beta-ketoacyl synthase, C-terminal domain BO993_04010 PF01432 Peptidase family M3 BO993_04025 PF00394 Multicopper oxidase BO993_04025 PF07731 Multicopper oxidase BO993_04025 PF07732 Multicopper oxidase BO993_04030 PF05275 Copper resistance protein B precursor (CopB) BO993_04035 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BO993_04050 PF13340 Putative transposase of IS4/5 family (DUF4096) BO993_04065 PF01380 SIS domain BO993_04070 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BO993_04075 PF08402 TOBE domain BO993_04075 PF00005 ABC transporter BO993_04105 PF00512 His Kinase A (phospho-acceptor) domain BO993_04105 PF13426 PAS domain BO993_04105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BO993_04105 PF00672 HAMP domain BO993_04110 PF14602 Hexapeptide repeat of succinyl-transferase BO993_04110 PF00132 Bacterial transferase hexapeptide (six repeats) BO993_04110 PF12804 MobA-like NTP transferase domain BO993_04120 PF01817 Chorismate mutase type II BO993_04125 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BO993_04130 PF02874 ATP synthase alpha/beta family, beta-barrel domain BO993_04130 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BO993_04135 PF00231 ATP synthase BO993_04140 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BO993_04140 PF00306 ATP synthase alpha/beta chain, C terminal domain BO993_04140 PF02874 ATP synthase alpha/beta family, beta-barrel domain BO993_04145 PF00213 ATP synthase delta (OSCP) subunit BO993_04150 PF00430 ATP synthase B/B' CF(0) BO993_04155 PF00137 ATP synthase subunit C BO993_04160 PF00119 ATP synthase A chain BO993_04180 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BO993_04180 PF07992 Pyridine nucleotide-disulphide oxidoreductase BO993_04190 PF00364 Biotin-requiring enzyme BO993_04190 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BO993_04190 PF02817 e3 binding domain BO993_04215 PF03180 NLPA lipoprotein BO993_04220 PF00528 Binding-protein-dependent transport system inner membrane component BO993_04225 PF09383 NIL domain BO993_04225 PF00005 ABC transporter BO993_04230 PF00892 EamA-like transporter family BO993_04235 PF04461 Protein of unknown function (DUF520) BO993_04265 PF13419 Haloacid dehalogenase-like hydrolase BO993_04270 PF01479 S4 domain BO993_04270 PF00849 RNA pseudouridylate synthase BO993_04275 PF05175 Methyltransferase small domain BO993_04275 PF08468 Methyltransferase small domain N-terminal BO993_04290 PF07995 Glucose / Sorbosone dehydrogenase BO993_04305 PF00989 PAS fold BO993_04305 PF00512 His Kinase A (phospho-acceptor) domain BO993_04305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BO993_04325 PF00842 Alanine racemase, C-terminal domain BO993_04325 PF01168 Alanine racemase, N-terminal domain BO993_04330 PF01266 FAD dependent oxidoreductase BO993_04335 PF01037 Lrp/AsnC ligand binding domain BO993_04345 PF01641 SelR domain BO993_04355 PF01618 MotA/TolQ/ExbB proton channel family BO993_04360 PF13677 Membrane MotB of proton-channel complex MotA/MotB BO993_04360 PF00691 OmpA family BO993_04380 PF00486 Transcriptional regulatory protein, C terminal BO993_04380 PF00072 Response regulator receiver domain BO993_04385 PF13188 PAS domain BO993_04385 PF08448 PAS fold BO993_04385 PF00512 His Kinase A (phospho-acceptor) domain BO993_04385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BO993_04385 PF00072 Response regulator receiver domain BO993_04395 PF00082 Subtilase family BO993_04395 PF04151 Bacterial pre-peptidase C-terminal domain BO993_04410 PF01061 ABC-2 type transporter BO993_04415 PF00005 ABC transporter BO993_04420 PF00999 Sodium/hydrogen exchanger family BO993_04435 PF02469 Fasciclin domain BO993_04445 PF03167 Uracil DNA glycosylase superfamily BO993_04455 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BO993_04465 PF03358 NADPH-dependent FMN reductase BO993_04470 PF00248 Aldo/keto reductase family BO993_04485 PF05649 Peptidase family M13 BO993_04485 PF01431 Peptidase family M13 BO993_04505 PF13520 Amino acid permease BO993_04515 PF00072 Response regulator receiver domain BO993_04515 PF04397 LytTr DNA-binding domain BO993_04560 PF08448 PAS fold BO993_04560 PF03705 CheR methyltransferase, all-alpha domain BO993_04560 PF01739 CheR methyltransferase, SAM binding domain BO993_04560 PF01339 CheB methylesterase BO993_04575 PF02954 Bacterial regulatory protein, Fis family BO993_04575 PF00072 Response regulator receiver domain BO993_04575 PF00158 Sigma-54 interaction domain BO993_04580 PF01654 Cytochrome bd terminal oxidase subunit I BO993_04635 PF00593 TonB dependent receptor BO993_04635 PF07715 TonB-dependent Receptor Plug Domain BO993_04650 PF00005 ABC transporter BO993_04725 PF04546 Sigma-70, non-essential region BO993_04725 PF03979 Sigma-70 factor, region 1.1 BO993_04725 PF00140 Sigma-70 factor, region 1.2 BO993_04725 PF04542 Sigma-70 region 2 BO993_04725 PF04539 Sigma-70 region 3 BO993_04725 PF04545 Sigma-70, region 4 BO993_04730 PF02580 D-Tyr-tRNA(Tyr) deacylase BO993_04735 PF03279 Bacterial lipid A biosynthesis acyltransferase BO993_04750 PF00925 GTP cyclohydrolase II BO993_04770 PF00535 Glycosyl transferase family 2 BO993_04785 PF01029 NusB family BO993_04785 PF01189 16S rRNA methyltransferase RsmB/F BO993_04790 PF00551 Formyl transferase BO993_04790 PF02911 Formyl transferase, C-terminal domain BO993_04795 PF01327 Polypeptide deformylase BO993_04800 PF01476 LysM domain BO993_04805 PF02481 DNA recombination-mediator protein A BO993_04805 PF17782 DprA winged helix domain BO993_04810 PF04361 Protein of unknown function (DUF494) BO993_04815 PF07963 Prokaryotic N-terminal methylation motif BO993_04815 PF00114 Pilin (bacterial filament) BO993_04825 PF01131 DNA topoisomerase BO993_04825 PF01751 Toprim domain BO993_04825 PF13368 Topoisomerase C-terminal repeat BO993_04830 PF01300 Telomere recombination BO993_04855 PF01343 Peptidase family S49 BO993_04860 PF01554 MatE BO993_04885 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BO993_04885 PF18074 Primosomal protein N C-terminal domain BO993_04885 PF17764 3′ DNA-binding domain (3′BD) BO993_04885 PF00271 Helicase conserved C-terminal domain BO993_04885 PF00270 DEAD/DEAH box helicase BO993_04915 PF03091 CutA1 divalent ion tolerance protein BO993_04920 PF02683 Cytochrome C biogenesis protein transmembrane region BO993_04920 PF11412 Disulphide bond corrector protein DsbC BO993_04930 PF01220 Dehydroquinase class II BO993_04935 PF00364 Biotin-requiring enzyme BO993_04945 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BO993_04945 PF02785 Biotin carboxylase C-terminal domain BO993_04945 PF00289 Biotin carboxylase, N-terminal domain BO993_04975 PF01381 Helix-turn-helix BO993_04985 PF02954 Bacterial regulatory protein, Fis family BO993_04995 PF00782 Dual specificity phosphatase, catalytic domain BO993_05000 PF12146 Serine aminopeptidase, S33 BO993_05000 PF12147 Putative methyltransferase BO993_05010 PF12146 Serine aminopeptidase, S33 BO993_05010 PF12147 Putative methyltransferase BO993_05015 PF05598 Transposase domain (DUF772) BO993_05015 PF01609 Transposase DDE domain BO993_05025 PF02142 MGS-like domain BO993_05025 PF01808 AICARFT/IMPCHase bienzyme BO993_05030 PF02844 Phosphoribosylglycinamide synthetase, N domain BO993_05030 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BO993_05030 PF02843 Phosphoribosylglycinamide synthetase, C domain BO993_05055 PF12805 FUSC-like inner membrane protein yccS BO993_05070 PF07690 Major Facilitator Superfamily BO993_05090 PF17113 Regulatory signalling modulator protein AmpE BO993_05090 PF03186 CobD/Cbib protein BO993_05095 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain BO993_05095 PF09297 NADH pyrophosphatase zinc ribbon domain BO993_05095 PF00293 NUDIX domain BO993_05105 PF01521 Iron-sulphur cluster biosynthesis BO993_05130 PF00486 Transcriptional regulatory protein, C terminal BO993_05130 PF00072 Response regulator receiver domain BO993_05135 PF00512 His Kinase A (phospho-acceptor) domain BO993_05135 PF01627 Hpt domain BO993_05135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BO993_05135 PF00672 HAMP domain BO993_05135 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BO993_05135 PF00072 Response regulator receiver domain BO993_05175 PF00579 tRNA synthetases class I (W and Y) BO993_05180 PF04225 Opacity-associated protein A LysM-like domain BO993_05180 PF01551 Peptidase family M23 BO993_05185 PF03702 Anhydro-N-acetylmuramic acid kinase BO993_05195 PF07690 Major Facilitator Superfamily BO993_05200 PF03372 Endonuclease/Exonuclease/phosphatase family BO993_05205 PF00156 Phosphoribosyl transferase domain BO993_05215 PF13614 AAA domain BO993_05220 PF17762 HTH domain found in ParB protein BO993_05220 PF02195 ParB-like nuclease domain BO993_05230 PF01370 NAD dependent epimerase/dehydratase family BO993_05235 PF00535 Glycosyl transferase family 2 BO993_05250 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BO993_05250 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BO993_05250 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BO993_05250 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BO993_05255 PF00692 dUTPase BO993_05260 PF02441 Flavoprotein BO993_05260 PF04127 DNA / pantothenate metabolism flavoprotein BO993_05265 PF04002 RadC-like JAB domain BO993_05270 PF00750 tRNA synthetases class I (R) BO993_05270 PF05746 DALR anticodon binding domain BO993_05270 PF03485 Arginyl tRNA synthetase N terminal domain BO993_05285 PF00106 short chain dehydrogenase BO993_05300 PF01614 Bacterial transcriptional regulator BO993_05300 PF09339 IclR helix-turn-helix domain BO993_05310 PF02627 Carboxymuconolactone decarboxylase family BO993_05315 PF12146 Serine aminopeptidase, S33 BO993_05320 PF00206 Lyase BO993_05320 PF10397 Adenylosuccinate lyase C-terminus BO993_05335 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal BO993_05335 PF00775 Dioxygenase BO993_05340 PF00108 Thiolase, N-terminal domain BO993_05340 PF02803 Thiolase, C-terminal domain BO993_05355 PF13683 Integrase core domain BO993_05355 PF13276 HTH-like domain BO993_05380 PF00268 Ribonucleotide reductase, small chain BO993_05385 PF00317 Ribonucleotide reductase, all-alpha domain BO993_05385 PF02867 Ribonucleotide reductase, barrel domain BO993_05385 PF03477 ATP cone domain BO993_05395 PF00583 Acetyltransferase (GNAT) family BO993_05395 PF13607 Succinyl-CoA ligase like flavodoxin domain BO993_05395 PF13380 CoA binding domain BO993_05405 PF01769 Divalent cation transporter BO993_05405 PF03448 MgtE intracellular N domain BO993_05405 PF00571 CBS domain BO993_05410 PF02254 TrkA-N domain BO993_05410 PF00999 Sodium/hydrogen exchanger family BO993_05420 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BO993_05420 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BO993_05425 PF00723 Glycosyl hydrolases family 15 BO993_05440 PF05166 YcgL domain BO993_05445 PF00109 Beta-ketoacyl synthase, N-terminal domain BO993_05445 PF02801 Beta-ketoacyl synthase, C-terminal domain BO993_05455 PF00535 Glycosyl transferase family 2 BO993_05480 PF00155 Aminotransferase class I and II BO993_05485 PF04055 Radical SAM superfamily BO993_05485 PF06968 Biotin and Thiamin Synthesis associated domain BO993_05495 PF01040 UbiA prenyltransferase family BO993_05505 PF01594 AI-2E family transporter BO993_05515 PF02789 Cytosol aminopeptidase family, N-terminal domain BO993_05515 PF00883 Cytosol aminopeptidase family, catalytic domain BO993_05530 PF00199 Catalase BO993_05550 PF00892 EamA-like transporter family BO993_05580 PF00753 Metallo-beta-lactamase superfamily BO993_05585 PF00579 tRNA synthetases class I (W and Y) BO993_05590 PF05532 CsbD-like BO993_05605 PF00491 Arginase family BO993_05625 PF02223 Thymidylate kinase BO993_05640 PF03309 Type III pantothenate kinase BO993_05645 PF03099 Biotin/lipoate A/B protein ligase family BO993_05645 PF08279 HTH domain BO993_05645 PF02237 Biotin protein ligase C terminal domain BO993_05670 PF00672 HAMP domain BO993_05670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BO993_05670 PF00512 His Kinase A (phospho-acceptor) domain BO993_05675 PF00486 Transcriptional regulatory protein, C terminal BO993_05675 PF00072 Response regulator receiver domain BO993_05685 PF01207 Dihydrouridine synthase (Dus) BO993_05705 PF00199 Catalase BO993_05705 PF06628 Catalase-related immune-responsive BO993_05710 PF13533 Biotin-lipoyl like BO993_05730 PF06733 DEAD_2 BO993_05730 PF13307 Helicase C-terminal domain BO993_05740 PF01488 Shikimate / quinate 5-dehydrogenase BO993_05740 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BO993_05740 PF08501 Shikimate dehydrogenase substrate binding domain BO993_05755 PF00175 Oxidoreductase NAD-binding domain BO993_05755 PF00258 Flavodoxin BO993_05755 PF00667 FAD binding domain BO993_05765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BO993_05765 PF03466 LysR substrate binding domain BO993_05780 PF00490 Delta-aminolevulinic acid dehydratase BO993_05805 PF00326 Prolyl oligopeptidase family BO993_05805 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region BO993_05810 PF02798 Glutathione S-transferase, N-terminal domain BO993_05810 PF00043 Glutathione S-transferase, C-terminal domain BO993_05830 PF04820 Tryptophan halogenase BO993_05845 PF00005 ABC transporter BO993_05855 PF01381 Helix-turn-helix BO993_05865 PF02583 Metal-sensitive transcriptional repressor BO993_05870 PF01545 Cation efflux family BO993_05875 PF00111 2Fe-2S iron-sulfur cluster binding domain BO993_05875 PF00970 Oxidoreductase FAD-binding domain BO993_05875 PF00175 Oxidoreductase NAD-binding domain BO993_05880 PF00005 ABC transporter BO993_05885 PF01061 ABC-2 type transporter BO993_05895 PF08546 Ketopantoate reductase PanE/ApbA C terminal BO993_05895 PF02558 Ketopantoate reductase PanE/ApbA BO993_05930 PF13683 Integrase core domain BO993_05930 PF13276 HTH-like domain BO993_05935 PF13340 Putative transposase of IS4/5 family (DUF4096) BO993_05970 PF07478 D-ala D-ala ligase C-terminus BO993_05970 PF01820 D-ala D-ala ligase N-terminus BO993_05985 PF03109 ABC1 family BO993_05995 PF00849 RNA pseudouridylate synthase BO993_06005 PF00472 RF-1 domain BO993_06020 PF01432 Peptidase family M3 BO993_06045 PF05336 L-rhamnose mutarotase BO993_06050 PF07690 Major Facilitator Superfamily BO993_06055 PF09339 IclR helix-turn-helix domain BO993_06055 PF01614 Bacterial transcriptional regulator BO993_06060 PF02659 Putative manganese efflux pump BO993_06065 PF00512 His Kinase A (phospho-acceptor) domain BO993_06065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BO993_06080 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain BO993_06080 PF06165 Glycosyltransferase family 36 BO993_06100 PF13340 Putative transposase of IS4/5 family (DUF4096) BO993_06110 PF13360 PQQ-like domain BO993_06110 PF01011 PQQ enzyme repeat BO993_06110 PF13570 PQQ-like domain BO993_06130 PF01527 Transposase BO993_06135 PF13683 Integrase core domain BO993_06135 PF13276 HTH-like domain BO993_06165 PF13340 Putative transposase of IS4/5 family (DUF4096) BO993_06195 PF00005 ABC transporter BO993_06200 PF02405 Permease MlaE BO993_06205 PF02470 MlaD protein BO993_06210 PF05494 MlaC protein BO993_06220 PF04333 MlaA lipoprotein BO993_06230 PF05598 Transposase domain (DUF772) BO993_06240 PF13340 Putative transposase of IS4/5 family (DUF4096) BO993_06255 PF06827 Zinc finger found in FPG and IleRS BO993_06255 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BO993_06255 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BO993_06300 PF03594 Benzoate membrane transport protein BO993_06305 PF03594 Benzoate membrane transport protein BO993_06310 PF13426 PAS domain BO993_06310 PF00360 Phytochrome region BO993_06310 PF08446 PAS fold BO993_06310 PF01590 GAF domain BO993_06315 PF01126 Heme oxygenase BO993_06320 PF07690 Major Facilitator Superfamily BO993_06325 PF01263 Aldose 1-epimerase BO993_06335 PF02810 SEC-C motif BO993_06345 PF00150 Cellulase (glycosyl hydrolase family 5) BO993_06355 PF00150 Cellulase (glycosyl hydrolase family 5) BO993_06360 PF00150 Cellulase (glycosyl hydrolase family 5) BO993_06365 PF00107 Zinc-binding dehydrogenase BO993_06365 PF08240 Alcohol dehydrogenase GroES-like domain BO993_06395 PF05598 Transposase domain (DUF772) BO993_06400 PF13936 Helix-turn-helix domain BO993_06400 PF00665 Integrase core domain BO993_06405 PF07715 TonB-dependent Receptor Plug Domain BO993_06405 PF00593 TonB dependent receptor BO993_06410 PF00593 TonB dependent receptor BO993_06410 PF07715 TonB-dependent Receptor Plug Domain BO993_06420 PF01037 Lrp/AsnC ligand binding domain BO993_06425 PF00351 Biopterin-dependent aromatic amino acid hydroxylase BO993_06435 PF00657 GDSL-like Lipase/Acylhydrolase BO993_06470 PF01553 Acyltransferase BO993_06480 PF00356 Bacterial regulatory proteins, lacI family BO993_06495 PF04820 Tryptophan halogenase BO993_06500 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BO993_06505 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) BO993_06510 PF04337 Protein of unknown function, DUF480 BO993_06525 PF00580 UvrD/REP helicase N-terminal domain BO993_06525 PF13361 UvrD-like helicase C-terminal domain BO993_06530 PF00265 Thymidine kinase BO993_06540 PF04349 Periplasmic glucan biosynthesis protein, MdoG BO993_06550 PF13683 Integrase core domain BO993_06550 PF13276 HTH-like domain BO993_06560 PF12697 Alpha/beta hydrolase family BO993_06570 PF13649 Methyltransferase domain BO993_06590 PF00291 Pyridoxal-phosphate dependent enzyme BO993_06600 PF13932 GidA associated domain BO993_06600 PF01134 Glucose inhibited division protein A BO993_06655 PF17810 Arginine decarboxylase helical bundle domain BO993_06655 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BO993_06655 PF17944 Arginine decarboxylase C-terminal helical extension BO993_06660 PF17284 Spermidine synthase tetramerisation domain BO993_06685 PF00543 Nitrogen regulatory protein P-II BO993_06690 PF04380 Membrane fusogenic activity BO993_06695 PF13335 Magnesium chelatase, subunit ChlI C-terminal BO993_06695 PF01078 Magnesium chelatase, subunit ChlI BO993_06720 PF00872 Transposase, Mutator family BO993_06735 PF13276 HTH-like domain BO993_06735 PF13683 Integrase core domain BO993_06740 PF00128 Alpha amylase, catalytic domain BO993_06740 PF11896 Domain of unknown function (DUF3416) BO993_06745 PF00128 Alpha amylase, catalytic domain BO993_06745 PF16657 Maltogenic Amylase, C-terminal domain BO993_06750 PF00128 Alpha amylase, catalytic domain BO993_06750 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BO993_06750 PF02806 Alpha amylase, C-terminal all-beta domain BO993_06770 PF00356 Bacterial regulatory proteins, lacI family BO993_06775 PF04962 KduI/IolB family BO993_06780 PF04962 KduI/IolB family BO993_06815 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BO993_06815 PF07992 Pyridine nucleotide-disulphide oxidoreductase BO993_06820 PF01645 Conserved region in glutamate synthase BO993_06820 PF00310 Glutamine amidotransferases class-II BO993_06820 PF01493 GXGXG motif BO993_06820 PF04898 Glutamate synthase central domain BO993_06875 PF00271 Helicase conserved C-terminal domain BO993_06875 PF09369 Domain of unknown function (DUF1998) BO993_06875 PF00270 DEAD/DEAH box helicase BO993_06880 PF03006 Haemolysin-III related BO993_06895 PF08845 Toxin SymE, type I toxin-antitoxin system BO993_06920 PF00005 ABC transporter BO993_06945 PF13533 Biotin-lipoyl like BO993_06965 PF00005 ABC transporter BO993_06975 PF05598 Transposase domain (DUF772) BO993_06985 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BO993_06985 PF00364 Biotin-requiring enzyme BO993_07005 PF05598 Transposase domain (DUF772) BO993_07005 PF01609 Transposase DDE domain BO993_07015 PF00271 Helicase conserved C-terminal domain BO993_07015 PF00270 DEAD/DEAH box helicase BO993_07025 PF06903 VirK protein BO993_07085 PF03150 Di-haem cytochrome c peroxidase BO993_07095 PF13460 NAD(P)H-binding BO993_07100 PF00128 Alpha amylase, catalytic domain BO993_07100 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BO993_07110 PF00128 Alpha amylase, catalytic domain BO993_07115 PF02446 4-alpha-glucanotransferase BO993_07120 PF11941 Domain of unknown function (DUF3459) BO993_07120 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BO993_07120 PF00128 Alpha amylase, catalytic domain BO993_07125 PF02806 Alpha amylase, C-terminal all-beta domain BO993_07125 PF00128 Alpha amylase, catalytic domain BO993_07125 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BO993_07130 PF08323 Starch synthase catalytic domain BO993_07130 PF00534 Glycosyl transferases group 1 BO993_07135 PF00072 Response regulator receiver domain BO993_07135 PF00990 Diguanylate cyclase, GGDEF domain BO993_07145 PF05661 Protein of unknown function (DUF808) BO993_07150 PF03109 ABC1 family BO993_07160 PF13340 Putative transposase of IS4/5 family (DUF4096) BO993_07170 PF12795 Mechanosensitive ion channel porin domain BO993_07170 PF12794 Mechanosensitive ion channel inner membrane domain 1 BO993_07170 PF00924 Mechanosensitive ion channel BO993_07200 PF01464 Transglycosylase SLT domain BO993_07215 PF01311 Bacterial export proteins, family 1 BO993_07225 PF18269 T3SS EscN ATPase C-terminal domain BO993_07225 PF02874 ATP synthase alpha/beta family, beta-barrel domain BO993_07225 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BO993_07240 PF01514 Secretory protein of YscJ/FliF family BO993_07255 PF01312 FlhB HrpN YscU SpaS Family BO993_07260 PF00771 FHIPEP family BO993_07275 PF00813 FliP family BO993_07280 PF01313 Bacterial export proteins, family 3 BO993_07330 PF05819 NolX protein BO993_07360 PF00595 PDZ domain BO993_07370 PF00512 His Kinase A (phospho-acceptor) domain BO993_07370 PF08521 Two-component sensor kinase N-terminal BO993_07370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BO993_07375 PF01370 NAD dependent epimerase/dehydratase family BO993_07375 PF08338 Domain of unknown function (DUF1731) BO993_07410 PF13936 Helix-turn-helix domain BO993_07410 PF00665 Integrase core domain BO993_07425 PF13344 Haloacid dehalogenase-like hydrolase BO993_07425 PF00293 NUDIX domain BO993_07475 PF01609 Transposase DDE domain BO993_07475 PF05598 Transposase domain (DUF772) BO993_07495 PF00294 pfkB family carbohydrate kinase BO993_07500 PF07055 Enoyl reductase FAD binding domain BO993_07500 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase BO993_07500 PF12241 Trans-2-enoyl-CoA reductase catalytic region BO993_07520 PF01070 FMN-dependent dehydrogenase BO993_07540 PF00593 TonB dependent receptor BO993_07540 PF07715 TonB-dependent Receptor Plug Domain BO993_07545 PF00155 Aminotransferase class I and II BO993_07550 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain BO993_07560 PF13091 PLD-like domain BO993_07560 PF13396 Phospholipase_D-nuclease N-terminal BO993_07570 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ BO993_07575 PF02472 Biopolymer transport protein ExbD/TolR BO993_07580 PF02472 Biopolymer transport protein ExbD/TolR BO993_07585 PF01618 MotA/TolQ/ExbB proton channel family BO993_07590 PF03544 Gram-negative bacterial TonB protein C-terminal BO993_07600 PF01435 Peptidase family M48 BO993_07610 PF01751 Toprim domain BO993_07610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BO993_07610 PF00986 DNA gyrase B subunit, carboxyl terminus BO993_07610 PF18053 DNA gyrase B subunit insert domain BO993_07610 PF00204 DNA gyrase B BO993_07615 PF02463 RecF/RecN/SMC N terminal domain BO993_07620 PF02767 DNA polymerase III beta subunit, central domain BO993_07620 PF02768 DNA polymerase III beta subunit, C-terminal domain BO993_07620 PF00712 DNA polymerase III beta subunit, N-terminal domain BO993_07625 PF08299 Bacterial dnaA protein helix-turn-helix BO993_07625 PF00308 Bacterial dnaA protein BO993_07625 PF11638 DnaA N-terminal domain BO993_07630 PF00468 Ribosomal protein L34 BO993_07635 PF00825 Ribonuclease P BO993_07640 PF14849 YidC periplasmic domain BO993_07640 PF02096 60Kd inner membrane protein BO993_07645 PF01522 Polysaccharide deacetylase BO993_07650 PF10396 GTP-binding protein TrmE N-terminus BO993_07650 PF12631 MnmE helical domain BO993_07650 PF01926 50S ribosome-binding GTPase BO993_07655 PF01569 PAP2 superfamily BO993_07665 PF03009 Glycerophosphoryl diester phosphodiesterase family BO993_07675 PF01694 Rhomboid family BO993_07680 PF03741 Integral membrane protein TerC family BO993_07685 PF17785 PUA-like domain BO993_07685 PF10672 S-adenosylmethionine-dependent methyltransferase BO993_07700 PF07690 Major Facilitator Superfamily BO993_07705 PF02595 Glycerate kinase family BO993_07730 PF00872 Transposase, Mutator family BO993_07755 PF13396 Phospholipase_D-nuclease N-terminal BO993_07755 PF13091 PLD-like domain BO993_07765 PF00083 Sugar (and other) transporter BO993_07785 PF01227 GTP cyclohydrolase I BO993_07790 PF02463 RecF/RecN/SMC N terminal domain BO993_07825 PF05598 Transposase domain (DUF772) BO993_07840 PF04389 Peptidase family M28 BO993_07850 PF01551 Peptidase family M23 BO993_07855 PF03572 Peptidase family S41 BO993_07855 PF13180 PDZ domain BO993_07865 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BO993_07865 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BO993_07880 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) BO993_07890 PF04055 Radical SAM superfamily BO993_07905 PF05598 Transposase domain (DUF772) BO993_07920 PF00255 Glutathione peroxidase BO993_07930 PF02646 RmuC family BO993_07935 PF13520 Amino acid permease BO993_07950 PF13361 UvrD-like helicase C-terminal domain BO993_07950 PF00580 UvrD/REP helicase N-terminal domain BO993_07965 PF13396 Phospholipase_D-nuclease N-terminal BO993_07965 PF13091 PLD-like domain BO993_07970 PF03466 LysR substrate binding domain BO993_07970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BO993_07975 PF03737 Aldolase/RraA BO993_07980 PF04303 PrpF protein BO993_07985 PF04909 Amidohydrolase BO993_07990 PF00471 Ribosomal protein L33 BO993_07995 PF00830 Ribosomal L28 family BO993_08010 PF02527 rRNA small subunit methyltransferase G BO993_08015 PF16655 PhoD-like phosphatase, N-terminal domain BO993_08015 PF09423 PhoD-like phosphatase BO993_08020 PF16655 PhoD-like phosphatase, N-terminal domain BO993_08020 PF09423 PhoD-like phosphatase BO993_08025 PF01648 4'-phosphopantetheinyl transferase superfamily BO993_08030 PF04226 Transglycosylase associated protein BO993_08040 PF03372 Endonuclease/Exonuclease/phosphatase family BO993_08055 PF00474 Sodium:solute symporter family BO993_08060 PF04341 Protein of unknown function, DUF485 BO993_08075 PF16177 Acetyl-coenzyme A synthetase N-terminus BO993_08075 PF13193 AMP-binding enzyme C-terminal domain BO993_08075 PF00501 AMP-binding enzyme BO993_08080 PF00196 Bacterial regulatory proteins, luxR family BO993_08080 PF00072 Response regulator receiver domain BO993_08105 PF04616 Glycosyl hydrolases family 43 BO993_08105 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain BO993_08115 PF00248 Aldo/keto reductase family BO993_08130 PF01557 Fumarylacetoacetate (FAA) hydrolase family BO993_08135 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BO993_08135 PF13378 Enolase C-terminal domain-like BO993_08140 PF07308 Protein of unknown function (DUF1456) BO993_08145 PF08482 ATP-dependent helicase C-terminal BO993_08145 PF00271 Helicase conserved C-terminal domain BO993_08145 PF04408 Helicase associated domain (HA2) BO993_08145 PF00270 DEAD/DEAH box helicase BO993_08160 PF00849 RNA pseudouridylate synthase BO993_08170 PF00248 Aldo/keto reductase family BO993_08175 PF16884 N-terminal domain of oxidoreductase BO993_08175 PF00107 Zinc-binding dehydrogenase BO993_08180 PF00248 Aldo/keto reductase family BO993_08200 PF13683 Integrase core domain BO993_08200 PF13276 HTH-like domain BO993_08205 PF05598 Transposase domain (DUF772) BO993_08205 PF01609 Transposase DDE domain BO993_08220 PF01734 Patatin-like phospholipase BO993_08230 PF00005 ABC transporter BO993_08245 PF00005 ABC transporter BO993_08245 PF00571 CBS domain BO993_08250 PF00528 Binding-protein-dependent transport system inner membrane component BO993_08260 PF12867 DinB superfamily BO993_08260 PF03781 Sulfatase-modifying factor enzyme 1 BO993_08265 PF10017 Histidine-specific methyltransferase, SAM-dependent BO993_08270 PF13657 HipA N-terminal domain BO993_08270 PF07804 HipA-like C-terminal domain BO993_08275 PF01381 Helix-turn-helix BO993_08295 PF10609 NUBPL iron-transfer P-loop NTPase BO993_08295 PF01883 Iron-sulfur cluster assembly protein BO993_08310 PF13091 PLD-like domain BO993_08315 PF03061 Thioesterase superfamily BO993_08355 PF02673 Bacitracin resistance protein BacA BO993_08360 PF03951 Glutamine synthetase, beta-Grasp domain BO993_08360 PF00120 Glutamine synthetase, catalytic domain BO993_08365 PF00543 Nitrogen regulatory protein P-II BO993_08370 PF00909 Ammonium Transporter Family BO993_08375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BO993_08375 PF00989 PAS fold BO993_08375 PF00512 His Kinase A (phospho-acceptor) domain BO993_08380 PF00158 Sigma-54 interaction domain BO993_08380 PF02954 Bacterial regulatory protein, Fis family BO993_08380 PF00072 Response regulator receiver domain BO993_08385 PF00080 Copper/zinc superoxide dismutase (SODC) BO993_08390 PF00080 Copper/zinc superoxide dismutase (SODC) BO993_08430 PF17946 RecC C-terminal domain BO993_08435 PF13361 UvrD-like helicase C-terminal domain BO993_08435 PF00580 UvrD/REP helicase N-terminal domain BO993_08435 PF12705 PD-(D/E)XK nuclease superfamily BO993_08440 PF13538 UvrD-like helicase C-terminal domain BO993_08445 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB BO993_08450 PF01381 Helix-turn-helix BO993_08520 PF02566 OsmC-like protein BO993_08525 PF01047 MarR family BO993_08560 PF00440 Bacterial regulatory proteins, tetR family BO993_08565 PF00175 Oxidoreductase NAD-binding domain BO993_08565 PF00111 2Fe-2S iron-sulfur cluster binding domain BO993_08565 PF00970 Oxidoreductase FAD-binding domain BO993_08570 PF00487 Fatty acid desaturase BO993_08585 PF13340 Putative transposase of IS4/5 family (DUF4096) BO993_08615 PF04616 Glycosyl hydrolases family 43 BO993_08640 PF00553 Cellulose binding domain BO993_08640 PF03422 Carbohydrate binding module (family 6) BO993_08640 PF00331 Glycosyl hydrolase family 10 BO993_08645 PF00331 Glycosyl hydrolase family 10 BO993_08645 PF03422 Carbohydrate binding module (family 6) BO993_08645 PF00553 Cellulose binding domain BO993_08650 PF02614 Glucuronate isomerase BO993_08670 PF08125 Mannitol dehydrogenase C-terminal domain BO993_08670 PF01232 Mannitol dehydrogenase Rossmann domain BO993_08675 PF00933 Glycosyl hydrolase family 3 N terminal domain BO993_08675 PF07691 PA14 domain BO993_08675 PF14310 Fibronectin type III-like domain BO993_08675 PF01915 Glycosyl hydrolase family 3 C-terminal domain BO993_08680 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain BO993_08680 PF04616 Glycosyl hydrolases family 43 BO993_08685 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BO993_08685 PF13378 Enolase C-terminal domain-like BO993_08695 PF03648 Glycosyl hydrolase family 67 N-terminus BO993_08695 PF07477 Glycosyl hydrolase family 67 C-terminus BO993_08695 PF07488 Glycosyl hydrolase family 67 middle domain BO993_08700 PF00356 Bacterial regulatory proteins, lacI family BO993_08710 PF01171 PP-loop family BO993_08715 PF04381 Putative exonuclease, RdgC BO993_08735 PF12697 Alpha/beta hydrolase family BO993_08740 PF00762 Ferrochelatase BO993_08750 PF02416 mttA/Hcf106 family BO993_08755 PF02416 mttA/Hcf106 family BO993_08760 PF00902 Sec-independent protein translocase protein (TatC) BO993_08770 PF00958 GMP synthase C terminal domain BO993_08770 PF00117 Glutamine amidotransferase class-I BO993_08790 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BO993_08790 PF00437 Type II/IV secretion system protein BO993_08795 PF02091 Glycyl-tRNA synthetase alpha subunit BO993_08800 PF05746 DALR anticodon binding domain BO993_08800 PF02092 Glycyl-tRNA synthetase beta subunit BO993_08805 PF13181 Tetratricopeptide repeat BO993_08810 PF00593 TonB dependent receptor BO993_08810 PF07715 TonB-dependent Receptor Plug Domain BO993_08825 PF03969 AFG1-like ATPase BO993_08845 PF07683 Cobalamin synthesis protein cobW C-terminal domain BO993_08845 PF02492 CobW/HypB/UreG, nucleotide-binding domain BO993_08905 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BO993_08905 PF02770 Acyl-CoA dehydrogenase, middle domain BO993_08905 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BO993_08910 PF01039 Carboxyl transferase domain BO993_08915 PF02785 Biotin carboxylase C-terminal domain BO993_08915 PF00289 Biotin carboxylase, N-terminal domain BO993_08915 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BO993_08915 PF00364 Biotin-requiring enzyme BO993_08920 PF00326 Prolyl oligopeptidase family BO993_08950 PF13276 HTH-like domain BO993_08950 PF13683 Integrase core domain BO993_08975 PF00576 HIUase/Transthyretin family BO993_08980 PF01014 Uricase BO993_08980 PF09349 OHCU decarboxylase BO993_08995 PF00266 Aminotransferase class-V BO993_09040 PF01026 TatD related DNase BO993_09055 PF03466 LysR substrate binding domain BO993_09055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BO993_09060 PF07690 Major Facilitator Superfamily BO993_09070 PF02146 Sir2 family BO993_09075 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BO993_09080 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BO993_09080 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BO993_09100 PF00551 Formyl transferase BO993_09105 PF00072 Response regulator receiver domain BO993_09105 PF00486 Transcriptional regulatory protein, C terminal BO993_09110 PF00512 His Kinase A (phospho-acceptor) domain BO993_09110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BO993_09110 PF00672 HAMP domain BO993_09115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BO993_09115 PF00512 His Kinase A (phospho-acceptor) domain BO993_09115 PF00672 HAMP domain BO993_09130 PF02677 Epoxyqueuosine reductase QueH BO993_09135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BO993_09135 PF03466 LysR substrate binding domain BO993_09140 PF03358 NADPH-dependent FMN reductase BO993_09150 PF08267 Cobalamin-independent synthase, N-terminal domain BO993_09150 PF01717 Cobalamin-independent synthase, Catalytic domain BO993_09155 PF03812 2-keto-3-deoxygluconate permease BO993_09165 PF05368 NmrA-like family BO993_09170 PF01638 HxlR-like helix-turn-helix BO993_09225 PF04820 Tryptophan halogenase BO993_09230 PF00550 Phosphopantetheine attachment site BO993_09240 PF01553 Acyltransferase BO993_09245 PF07977 FabA-like domain BO993_09285 PF04357 TamB, inner membrane protein subunit of TAM complex BO993_09290 PF17243 POTRA domain TamA domain 1 BO993_09290 PF01103 Surface antigen BO993_09310 PF07498 Rho termination factor, N-terminal domain BO993_09310 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BO993_09310 PF07497 Rho termination factor, RNA-binding domain BO993_09315 PF00085 Thioredoxin BO993_09320 PF00271 Helicase conserved C-terminal domain BO993_09320 PF00270 DEAD/DEAH box helicase BO993_09320 PF12300 ATP-dependent RNA helicase RhlB BO993_09325 PF00005 ABC transporter BO993_09330 PF18075 FtsX extracellular domain BO993_09335 PF01339 CheB methylesterase BO993_09335 PF00072 Response regulator receiver domain BO993_09340 PF03167 Uracil DNA glycosylase superfamily BO993_09345 PF04542 Sigma-70 region 2 BO993_09345 PF04545 Sigma-70, region 4 BO993_09355 PF07992 Pyridine nucleotide-disulphide oxidoreductase BO993_09380 PF00166 Chaperonin 10 Kd subunit BO993_09385 PF00118 TCP-1/cpn60 chaperonin family BO993_09395 PF07715 TonB-dependent Receptor Plug Domain BO993_09395 PF00593 TonB dependent receptor BO993_09410 PF00793 DAHP synthetase I family BO993_09450 PF08450 SMP-30/Gluconolactonase/LRE-like region BO993_09460 PF08335 GlnD PII-uridylyltransferase BO993_09460 PF03710 Glutamate-ammonia ligase adenylyltransferase BO993_09465 PF02592 Putative vitamin uptake transporter BO993_09470 PF13340 Putative transposase of IS4/5 family (DUF4096) BO993_09515 PF00881 Nitroreductase family BO993_09520 PF04264 YceI-like domain BO993_09560 PF05598 Transposase domain (DUF772) BO993_09600 PF00456 Transketolase, thiamine diphosphate binding domain BO993_09600 PF17831 Pyruvate dehydrogenase E1 component middle domain BO993_09605 PF13286 Phosphohydrolase-associated domain BO993_09605 PF01966 HD domain BO993_09640 PF01612 3'-5' exonuclease BO993_09640 PF00476 DNA polymerase family A BO993_09640 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BO993_09640 PF01367 5'-3' exonuclease, C-terminal SAM fold BO993_09645 PF01218 Coproporphyrinogen III oxidase BO993_09660 PF05598 Transposase domain (DUF772) BO993_09660 PF01609 Transposase DDE domain BO993_09670 PF05598 Transposase domain (DUF772) BO993_09675 PF00589 Phage integrase family BO993_09675 PF13495 Phage integrase, N-terminal SAM-like domain BO993_09680 PF00920 Dehydratase family BO993_09685 PF03692 Putative zinc- or iron-chelating domain BO993_09690 PF00132 Bacterial transferase hexapeptide (six repeats) BO993_09720 PF07690 Major Facilitator Superfamily BO993_09725 PF01966 HD domain BO993_09725 PF11871 Domain of unknown function (DUF3391) BO993_09745 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family BO993_09750 PF00501 AMP-binding enzyme BO993_09755 PF03692 Putative zinc- or iron-chelating domain BO993_09760 PF00561 alpha/beta hydrolase fold BO993_09770 PF01555 DNA methylase BO993_09775 PF13784 Fic/DOC family N-terminal BO993_09775 PF02661 Fic/DOC family BO993_09780 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BO993_09780 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BO993_09795 PF00588 SpoU rRNA Methylase family BO993_09800 PF07690 Major Facilitator Superfamily BO993_09815 PF00158 Sigma-54 interaction domain BO993_09815 PF02954 Bacterial regulatory protein, Fis family BO993_09815 PF00072 Response regulator receiver domain BO993_09820 PF00512 His Kinase A (phospho-acceptor) domain BO993_09820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BO993_09825 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BO993_09825 PF00205 Thiamine pyrophosphate enzyme, central domain BO993_09825 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BO993_09835 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BO993_09835 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BO993_09840 PF02556 Preprotein translocase subunit SecB BO993_09845 PF00581 Rhodanese-like domain BO993_09875 PF07063 Domain of unknown function (DUF1338) BO993_09880 PF00873 AcrB/AcrD/AcrF family BO993_09885 PF00873 AcrB/AcrD/AcrF family BO993_09890 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BO993_09895 PF01546 Peptidase family M20/M25/M40 BO993_09895 PF07687 Peptidase dimerisation domain BO993_09905 PF14489 QueF-like protein BO993_09905 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term BO993_09925 PF01609 Transposase DDE domain BO993_09925 PF05598 Transposase domain (DUF772) BO993_09940 PF01609 Transposase DDE domain BO993_09940 PF05598 Transposase domain (DUF772) BO993_09955 PF05598 Transposase domain (DUF772) BO993_09970 PF03971 Monomeric isocitrate dehydrogenase BO993_09980 PF13683 Integrase core domain BO993_09980 PF13276 HTH-like domain BO993_09995 PF00117 Glutamine amidotransferase class-I BO993_10010 PF00591 Glycosyl transferase family, a/b domain BO993_10010 PF02885 Glycosyl transferase family, helical bundle domain BO993_10015 PF00218 Indole-3-glycerol phosphate synthase BO993_10025 PF00325 Bacterial regulatory proteins, crp family BO993_10025 PF00027 Cyclic nucleotide-binding domain BO993_10030 PF02675 S-adenosylmethionine decarboxylase BO993_10035 PF00893 Small Multidrug Resistance protein BO993_10040 PF03232 Ubiquinone biosynthesis protein COQ7 BO993_10045 PF00572 Ribosomal protein L13 BO993_10050 PF00380 Ribosomal protein S9/S16 BO993_10065 PF00293 NUDIX domain BO993_10075 PF00210 Ferritin-like domain BO993_10095 PF14850 DNA-binding domain of Proline dehydrogenase BO993_10095 PF01619 Proline dehydrogenase BO993_10095 PF18327 Proline utilization A proline dehydrogenase N-terminal domain BO993_10095 PF00171 Aldehyde dehydrogenase family BO993_10105 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BO993_10105 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BO993_10110 PF00115 Cytochrome C and Quinol oxidase polypeptide I BO993_10115 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 BO993_10120 PF00510 Cytochrome c oxidase subunit III BO993_10145 PF01040 UbiA prenyltransferase family BO993_10160 PF13593 SBF-like CPA transporter family (DUF4137) BO993_10180 PF08275 DNA primase catalytic core, N-terminal domain BO993_10180 PF10410 DnaB-helicase binding domain of primase BO993_10180 PF01807 CHC2 zinc finger BO993_10180 PF08278 DNA primase DnaG DnaB-binding BO993_10185 PF03631 Virulence factor BrkB BO993_10195 PF09424 Yqey-like protein BO993_10200 PF01165 Ribosomal protein S21 BO993_10205 PF00814 Glycoprotease family BO993_10210 PF02152 Dihydroneopterin aldolase BO993_10215 PF01915 Glycosyl hydrolase family 3 C-terminal domain BO993_10215 PF14310 Fibronectin type III-like domain BO993_10215 PF00933 Glycosyl hydrolase family 3 N terminal domain BO993_10250 PF07995 Glucose / Sorbosone dehydrogenase BO993_10255 PF05360 yiaA/B two helix domain BO993_10275 PF13340 Putative transposase of IS4/5 family (DUF4096) BO993_10285 PF13520 Amino acid permease BO993_10295 PF13340 Putative transposase of IS4/5 family (DUF4096) BO993_10325 PF13378 Enolase C-terminal domain-like BO993_10325 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BO993_10335 PF01510 N-acetylmuramoyl-L-alanine amidase BO993_10340 PF01427 D-ala-D-ala dipeptidase BO993_10410 PF02803 Thiolase, C-terminal domain BO993_10410 PF00108 Thiolase, N-terminal domain BO993_10420 PF13340 Putative transposase of IS4/5 family (DUF4096) BO993_10460 PF03301 Tryptophan 2,3-dioxygenase BO993_10465 PF00854 POT family BO993_10475 PF01047 MarR family BO993_10480 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BO993_10485 PF04209 homogentisate 1,2-dioxygenase BO993_10495 PF03334 Na+/H+ antiporter subunit BO993_10500 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) BO993_10510 PF00361 Proton-conducting membrane transporter BO993_10515 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BO993_10520 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BO993_10520 PF13244 Domain of unknown function (DUF4040) BO993_10520 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter BO993_10520 PF00361 Proton-conducting membrane transporter BO993_10535 PF03413 Peptidase propeptide and YPEB domain BO993_10535 PF02868 Thermolysin metallopeptidase, alpha-helical domain BO993_10535 PF07504 Fungalysin/Thermolysin Propeptide Motif BO993_10535 PF01447 Thermolysin metallopeptidase, catalytic domain BO993_10540 PF01447 Thermolysin metallopeptidase, catalytic domain BO993_10540 PF01483 Proprotein convertase P-domain BO993_10540 PF02868 Thermolysin metallopeptidase, alpha-helical domain BO993_10540 PF07504 Fungalysin/Thermolysin Propeptide Motif BO993_10565 PF01259 SAICAR synthetase BO993_10570 PF05099 Tellurite resistance protein TerB BO993_10570 PF00226 DnaJ domain BO993_10575 PF00834 Ribulose-phosphate 3 epimerase family BO993_10580 PF00583 Acetyltransferase (GNAT) family BO993_10585 PF00781 Diacylglycerol kinase catalytic domain BO993_10590 PF00425 chorismate binding enzyme BO993_10590 PF04715 Anthranilate synthase component I, N terminal region BO993_10615 PF00106 short chain dehydrogenase BO993_10660 PF07759 Protein of unknown function (DUF1615) BO993_10680 PF00892 EamA-like transporter family BO993_10685 PF03330 Lytic transglycolase BO993_10690 PF01341 Glycosyl hydrolases family 6 BO993_10690 PF00041 Fibronectin type III domain BO993_10690 PF00553 Cellulose binding domain BO993_10695 PF00324 Amino acid permease BO993_10705 PF01544 CorA-like Mg2+ transporter protein BO993_10725 PF01204 Trehalase BO993_10745 PF13340 Putative transposase of IS4/5 family (DUF4096) BO993_10775 PF00563 EAL domain BO993_10775 PF00990 Diguanylate cyclase, GGDEF domain BO993_10775 PF03707 Bacterial signalling protein N terminal repeat BO993_10785 PF00672 HAMP domain BO993_10785 PF02203 Tar ligand binding domain homologue BO993_10785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BO993_10795 PF00150 Cellulase (glycosyl hydrolase family 5) BO993_10795 PF00553 Cellulose binding domain BO993_10800 PF00916 Sulfate permease family BO993_10800 PF01740 STAS domain BO993_10810 PF00990 Diguanylate cyclase, GGDEF domain BO993_10810 PF08448 PAS fold BO993_10825 PF13340 Putative transposase of IS4/5 family (DUF4096) BO993_10835 PF13632 Glycosyl transferase family group 2 BO993_10845 PF06580 Histidine kinase BO993_10845 PF07694 5TMR of 5TMR-LYT BO993_10850 PF04397 LytTr DNA-binding domain BO993_10850 PF00072 Response regulator receiver domain BO993_10855 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BO993_10855 PF03900 Porphobilinogen deaminase, C-terminal domain BO993_10880 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BO993_10880 PF00326 Prolyl oligopeptidase family BO993_10895 PF13340 Putative transposase of IS4/5 family (DUF4096) BO993_10905 PF05598 Transposase domain (DUF772) BO993_10905 PF01609 Transposase DDE domain BO993_10910 PF00155 Aminotransferase class I and II BO993_10915 PF00326 Prolyl oligopeptidase family BO993_10915 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BO993_10930 PF01678 Diaminopimelate epimerase BO993_10940 PF02899 Phage integrase, N-terminal SAM-like domain BO993_10940 PF00589 Phage integrase family BO993_10950 PF00227 Proteasome subunit BO993_10955 PF10431 C-terminal, D2-small domain, of ClpB protein BO993_10955 PF07724 AAA domain (Cdc48 subfamily) BO993_10955 PF00004 ATPase family associated with various cellular activities (AAA) BO993_10970 PF01433 Peptidase family M1 domain BO993_10970 PF11838 ERAP1-like C-terminal domain BO993_10975 PF00990 Diguanylate cyclase, GGDEF domain BO993_10975 PF17152 Periplasmic sensor domain BO993_10980 PF01209 ubiE/COQ5 methyltransferase family BO993_10990 PF13533 Biotin-lipoyl like BO993_11015 PF13673 Acetyltransferase (GNAT) domain BO993_11035 PF00294 pfkB family carbohydrate kinase BO993_11045 PF04085 rod shape-determining protein MreC BO993_11055 PF00905 Penicillin binding protein transpeptidase domain BO993_11055 PF03717 Penicillin-binding Protein dimerisation domain BO993_11060 PF01098 Cell cycle protein BO993_11085 PF16671 Actin cross-linking domain BO993_11085 PF04717 Type VI secretion system, phage-baseplate injector BO993_11120 PF13406 Transglycosylase SLT domain BO993_11125 PF05036 Sporulation related domain BO993_11125 PF03330 Lytic transglycolase BO993_11135 PF00768 D-alanyl-D-alanine carboxypeptidase BO993_11135 PF07943 Penicillin-binding protein 5, C-terminal domain BO993_11145 PF04359 Protein of unknown function (DUF493) BO993_11150 PF03099 Biotin/lipoate A/B protein ligase family BO993_11155 PF04055 Radical SAM superfamily BO993_11155 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family BO993_11160 PF11818 C-terminal domain of tail specific protease (DUF3340) BO993_11160 PF00595 PDZ domain BO993_11160 PF03572 Peptidase family S41 BO993_11160 PF17804 Tail specific protease N-terminal domain BO993_11170 PF01467 Cytidylyltransferase-like BO993_11170 PF00293 NUDIX domain BO993_11210 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BO993_11210 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BO993_11215 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BO993_11215 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BO993_11220 PF04972 BON domain BO993_11225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BO993_11225 PF00512 His Kinase A (phospho-acceptor) domain BO993_11225 PF08446 PAS fold BO993_11225 PF01590 GAF domain BO993_11225 PF00360 Phytochrome region BO993_11230 PF00072 Response regulator receiver domain BO993_11235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BO993_11235 PF00512 His Kinase A (phospho-acceptor) domain BO993_11240 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BO993_11260 PF13683 Integrase core domain BO993_11260 PF13276 HTH-like domain BO993_11270 PF01527 Transposase BO993_11280 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 BO993_11280 PF02837 Glycosyl hydrolases family 2, sugar binding domain BO993_11280 PF00703 Glycosyl hydrolases family 2 BO993_11280 PF16355 Domain of unknown function (DUF4982) BO993_11280 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BO993_11300 PF07690 Major Facilitator Superfamily BO993_11305 PF00356 Bacterial regulatory proteins, lacI family BO993_11310 PF01380 SIS domain BO993_11315 PF01979 Amidohydrolase family BO993_11325 PF00535 Glycosyl transferase family 2 BO993_11330 PF01522 Polysaccharide deacetylase BO993_11330 PF14883 Hypothetical glycosyl hydrolase family 13 BO993_11375 PF01966 HD domain BO993_11375 PF01743 Poly A polymerase head domain BO993_11375 PF12627 Probable RNA and SrmB- binding site of polymerase A BO993_11405 PF01527 Transposase BO993_11410 PF01609 Transposase DDE domain BO993_11410 PF05598 Transposase domain (DUF772) BO993_11435 PF01609 Transposase DDE domain BO993_11435 PF05598 Transposase domain (DUF772) BO993_11445 PF02028 BCCT, betaine/carnitine/choline family transporter BO993_11465 PF00034 Cytochrome c BO993_11470 PF01926 50S ribosome-binding GTPase BO993_11480 PF04107 Glutamate-cysteine ligase family 2(GCS2) BO993_11525 PF00512 His Kinase A (phospho-acceptor) domain BO993_11525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BO993_11525 PF00672 HAMP domain BO993_11525 PF16527 Two-component sensor protein CpxA, periplasmic domain BO993_11530 PF00072 Response regulator receiver domain BO993_11530 PF00486 Transcriptional regulatory protein, C terminal BO993_11545 PF02583 Metal-sensitive transcriptional repressor BO993_11550 PF00107 Zinc-binding dehydrogenase BO993_11550 PF08240 Alcohol dehydrogenase GroES-like domain BO993_11560 PF00756 Putative esterase BO993_11575 PF05598 Transposase domain (DUF772) BO993_11575 PF01609 Transposase DDE domain BO993_11585 PF00005 ABC transporter BO993_11585 PF12848 ABC transporter BO993_11605 PF00464 Serine hydroxymethyltransferase BO993_11615 PF03477 ATP cone domain BO993_11625 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BO993_11625 PF01872 RibD C-terminal domain BO993_11635 PF00677 Lumazine binding domain BO993_11640 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BO993_11640 PF00925 GTP cyclohydrolase II BO993_11645 PF00885 6,7-dimethyl-8-ribityllumazine synthase BO993_11650 PF01029 NusB family BO993_11655 PF02769 AIR synthase related protein, C-terminal domain BO993_11655 PF00586 AIR synthase related protein, N-terminal domain BO993_11680 PF03814 Potassium-transporting ATPase A subunit BO993_11690 PF02669 K+-transporting ATPase, c chain BO993_11695 PF13493 Domain of unknown function (DUF4118) BO993_11695 PF00512 His Kinase A (phospho-acceptor) domain BO993_11695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BO993_11695 PF13492 GAF domain BO993_11695 PF02702 Osmosensitive K+ channel His kinase sensor domain BO993_11700 PF00486 Transcriptional regulatory protein, C terminal BO993_11700 PF00072 Response regulator receiver domain BO993_11705 PF02913 FAD linked oxidases, C-terminal domain BO993_11705 PF01565 FAD binding domain BO993_11710 PF04307 LexA-binding, inner membrane-associated putative hydrolase BO993_11715 PF02021 Uncharacterised protein family UPF0102 BO993_11725 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BO993_11745 PF02381 MraZ protein, putative antitoxin-like BO993_11750 PF01795 MraW methylase family BO993_11755 PF04999 Cell division protein FtsL BO993_11760 PF00905 Penicillin binding protein transpeptidase domain BO993_11760 PF03717 Penicillin-binding Protein dimerisation domain BO993_11765 PF01225 Mur ligase family, catalytic domain BO993_11765 PF08245 Mur ligase middle domain BO993_11765 PF02875 Mur ligase family, glutamate ligase domain BO993_11770 PF02875 Mur ligase family, glutamate ligase domain BO993_11770 PF01225 Mur ligase family, catalytic domain BO993_11770 PF08245 Mur ligase middle domain BO993_11775 PF00953 Glycosyl transferase family 4 BO993_11780 PF01098 Cell cycle protein BO993_11785 PF03033 Glycosyltransferase family 28 N-terminal domain BO993_11785 PF04101 Glycosyltransferase family 28 C-terminal domain BO993_11790 PF08245 Mur ligase middle domain BO993_11790 PF02875 Mur ligase family, glutamate ligase domain BO993_11790 PF01225 Mur ligase family, catalytic domain BO993_11795 PF01820 D-ala D-ala ligase N-terminus BO993_11795 PF07478 D-ala D-ala ligase C-terminus BO993_11800 PF03799 Cell division protein FtsQ BO993_11800 PF08478 POTRA domain, FtsQ-type BO993_11805 PF02491 SHS2 domain inserted in FTSA BO993_11810 PF00091 Tubulin/FtsZ family, GTPase domain BO993_11810 PF12327 FtsZ family, C-terminal domain BO993_11815 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase BO993_11825 PF01551 Peptidase family M23 BO993_11825 PF01476 LysM domain BO993_11830 PF02810 SEC-C motif BO993_11830 PF01043 SecA preprotein cross-linking domain BO993_11830 PF07516 SecA Wing and Scaffold domain BO993_11830 PF07517 SecA DEAD-like domain BO993_11840 PF00293 NUDIX domain BO993_11855 PF02219 Methylenetetrahydrofolate reductase BO993_11865 PF08659 KR domain BO993_11865 PF02801 Beta-ketoacyl synthase, C-terminal domain BO993_11865 PF00550 Phosphopantetheine attachment site BO993_11865 PF14765 Polyketide synthase dehydratase BO993_11865 PF00698 Acyl transferase domain BO993_11865 PF00109 Beta-ketoacyl synthase, N-terminal domain BO993_11865 PF16197 Ketoacyl-synthetase C-terminal extension BO993_11865 PF00107 Zinc-binding dehydrogenase BO993_11865 PF08240 Alcohol dehydrogenase GroES-like domain BO993_11870 PF09286 Pro-kumamolisin, activation domain BO993_11870 PF00082 Subtilase family BO993_11885 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BO993_11920 PF13649 Methyltransferase domain BO993_11925 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BO993_11925 PF05221 S-adenosyl-L-homocysteine hydrolase BO993_11935 PF00311 Phosphoenolpyruvate carboxylase BO993_11970 PF00328 Histidine phosphatase superfamily (branch 2) BO993_11975 PF00438 S-adenosylmethionine synthetase, N-terminal domain BO993_11975 PF02772 S-adenosylmethionine synthetase, central domain BO993_11975 PF02773 S-adenosylmethionine synthetase, C-terminal domain BO993_11985 PF13649 Methyltransferase domain BO993_11990 PF01207 Dihydrouridine synthase (Dus) BO993_12005 PF00294 pfkB family carbohydrate kinase BO993_12010 PF07662 Na+ dependent nucleoside transporter C-terminus BO993_12010 PF07670 Nucleoside recognition BO993_12010 PF01773 Na+ dependent nucleoside transporter N-terminus BO993_12020 PF05598 Transposase domain (DUF772) BO993_12020 PF01609 Transposase DDE domain BO993_12030 PF00248 Aldo/keto reductase family BO993_12045 PF13340 Putative transposase of IS4/5 family (DUF4096) BO993_12090 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BO993_12100 PF00005 ABC transporter BO993_12105 PF13472 GDSL-like Lipase/Acylhydrolase family BO993_12110 PF00072 Response regulator receiver domain BO993_12110 PF00486 Transcriptional regulatory protein, C terminal BO993_12115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BO993_12115 PF08521 Two-component sensor kinase N-terminal BO993_12115 PF00512 His Kinase A (phospho-acceptor) domain BO993_12140 PF01219 Prokaryotic diacylglycerol kinase BO993_12165 PF01790 Prolipoprotein diacylglyceryl transferase BO993_12170 PF00303 Thymidylate synthase BO993_12180 PF00186 Dihydrofolate reductase BO993_12185 PF00149 Calcineurin-like phosphoesterase BO993_12190 PF04379 ApaG domain BO993_12195 PF00398 Ribosomal RNA adenine dimethylase BO993_12205 PF04166 Pyridoxal phosphate biosynthetic protein PdxA BO993_12210 PF09312 SurA N-terminal domain BO993_12210 PF00639 PPIC-type PPIASE domain BO993_12215 PF04453 LPS transport system D BO993_12215 PF03968 OstA-like protein BO993_12220 PF00850 Histone deacetylase domain BO993_12225 PF01923 Cobalamin adenosyltransferase BO993_12235 PF01494 FAD binding domain BO993_12240 PF01494 FAD binding domain BO993_12270 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BO993_12280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BO993_12280 PF03466 LysR substrate binding domain BO993_12285 PF00501 AMP-binding enzyme BO993_12285 PF13193 AMP-binding enzyme C-terminal domain BO993_12290 PF00171 Aldehyde dehydrogenase family BO993_12295 PF00378 Enoyl-CoA hydratase/isomerase BO993_12315 PF08450 SMP-30/Gluconolactonase/LRE-like region BO993_12320 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BO993_12320 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BO993_12325 PF18125 RlmM ferredoxin-like domain BO993_12325 PF01728 FtsJ-like methyltransferase BO993_12375 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain BO993_12375 PF00749 tRNA synthetases class I (E and Q), catalytic domain BO993_12395 PF00990 Diguanylate cyclase, GGDEF domain BO993_12395 PF00072 Response regulator receiver domain BO993_12400 PF00072 Response regulator receiver domain BO993_12400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BO993_12400 PF00672 HAMP domain BO993_12400 PF01627 Hpt domain BO993_12400 PF00512 His Kinase A (phospho-acceptor) domain BO993_12400 PF17149 Periplasmic sensor domain found in signal transduction proteins BO993_12440 PF07992 Pyridine nucleotide-disulphide oxidoreductase BO993_12440 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BO993_12445 PF08240 Alcohol dehydrogenase GroES-like domain BO993_12445 PF00107 Zinc-binding dehydrogenase BO993_12450 PF05736 OprF membrane domain BO993_12450 PF00691 OmpA family BO993_12460 PF00849 RNA pseudouridylate synthase BO993_12470 PF00155 Aminotransferase class I and II BO993_12480 PF00528 Binding-protein-dependent transport system inner membrane component BO993_12485 PF00528 Binding-protein-dependent transport system inner membrane component BO993_12490 PF12857 TOBE-like domain BO993_12490 PF17850 CysA C-terminal regulatory domain BO993_12490 PF00005 ABC transporter BO993_12500 PF00107 Zinc-binding dehydrogenase BO993_12500 PF08240 Alcohol dehydrogenase GroES-like domain BO993_12510 PF05506 Domain of unknown function (DUF756) BO993_12510 PF04185 Phosphoesterase family BO993_12515 PF10459 Peptidase S46 BO993_12520 PF00300 Histidine phosphatase superfamily (branch 1) BO993_12530 PF02875 Mur ligase family, glutamate ligase domain BO993_12530 PF08245 Mur ligase middle domain BO993_12545 PF00156 Phosphoribosyl transferase domain BO993_12550 PF04305 Protein of unknown function (DUF455) BO993_12565 PF00149 Calcineurin-like phosphoesterase BO993_12570 PF01569 PAP2 superfamily BO993_12575 PF00534 Glycosyl transferases group 1 BO993_12575 PF13439 Glycosyltransferase Family 4 BO993_12580 PF02541 Ppx/GppA phosphatase family BO993_12585 PF13089 Polyphosphate kinase N-terminal domain BO993_12585 PF17941 Polyphosphate kinase C-terminal domain 1 BO993_12585 PF02503 Polyphosphate kinase middle domain BO993_12585 PF13090 Polyphosphate kinase C-terminal domain 2 BO993_12590 PF11808 Phosphate regulon sensor protein PhoR BO993_12590 PF00989 PAS fold BO993_12590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BO993_12590 PF00512 His Kinase A (phospho-acceptor) domain BO993_12595 PF00072 Response regulator receiver domain BO993_12595 PF00486 Transcriptional regulatory protein, C terminal BO993_12600 PF01435 Peptidase family M48 BO993_12600 PF13181 Tetratricopeptide repeat BO993_12605 PF00462 Glutaredoxin BO993_12630 PF00180 Isocitrate/isopropylmalate dehydrogenase BO993_12630 PF18324 Hypothetical protein TT1725 BO993_12685 PF05697 Bacterial trigger factor protein (TF) BO993_12685 PF05698 Bacterial trigger factor protein (TF) C-terminus BO993_12690 PF00574 Clp protease BO993_12695 PF06689 ClpX C4-type zinc finger BO993_12695 PF10431 C-terminal, D2-small domain, of ClpB protein BO993_12695 PF07724 AAA domain (Cdc48 subfamily) BO993_12700 PF05362 Lon protease (S16) C-terminal proteolytic domain BO993_12700 PF02190 ATP-dependent protease La (LON) substrate-binding domain BO993_12700 PF00004 ATPase family associated with various cellular activities (AAA) BO993_12705 PF00216 Bacterial DNA-binding protein BO993_12730 PF01476 LysM domain BO993_12730 PF05257 CHAP domain BO993_12735 PF16123 Hydroxyacylglutathione hydrolase C-terminus BO993_12735 PF00753 Metallo-beta-lactamase superfamily BO993_12745 PF00075 RNase H BO993_12750 PF00929 Exonuclease BO993_12810 PF00589 Phage integrase family BO993_12810 PF13356 Arm DNA-binding domain BO993_12820 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BO993_12830 PF00753 Metallo-beta-lactamase superfamily BO993_12830 PF12706 Beta-lactamase superfamily domain BO993_12835 PF06463 Molybdenum Cofactor Synthesis C BO993_12835 PF04055 Radical SAM superfamily BO993_12845 PF01967 MoaC family BO993_12850 PF02597 ThiS family BO993_12855 PF02391 MoaE protein BO993_12870 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding BO993_12870 PF12169 DNA polymerase III subunits gamma and tau domain III BO993_12870 PF12170 DNA polymerase III tau subunit V interacting with alpha BO993_12875 PF02575 YbaB/EbfC DNA-binding family BO993_12880 PF13662 Toprim domain BO993_12880 PF02132 RecR protein BO993_12885 PF01230 HIT domain BO993_12895 PF01841 Transglutaminase-like superfamily BO993_12895 PF11992 Domain of unknown function (DUF3488) BO993_12895 PF13559 Domain of unknown function (DUF4129) BO993_12905 PF17863 AAA lid domain BO993_12905 PF07726 ATPase family associated with various cellular activities (AAA) BO993_12920 PF03960 ArsC family BO993_12925 PF01327 Polypeptide deformylase BO993_12970 PF01609 Transposase DDE domain BO993_12970 PF05598 Transposase domain (DUF772) BO993_12995 PF00462 Glutaredoxin BO993_13000 PF01522 Polysaccharide deacetylase BO993_13025 PF03193 RsgA GTPase BO993_13040 PF00128 Alpha amylase, catalytic domain BO993_13060 PF00356 Bacterial regulatory proteins, lacI family BO993_13065 PF00106 short chain dehydrogenase BO993_13070 PF03600 Citrate transporter BO993_13080 PF00072 Response regulator receiver domain BO993_13080 PF00486 Transcriptional regulatory protein, C terminal BO993_13085 PF08521 Two-component sensor kinase N-terminal BO993_13085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BO993_13085 PF00512 His Kinase A (phospho-acceptor) domain BO993_13095 PF00196 Bacterial regulatory proteins, luxR family BO993_13095 PF00072 Response regulator receiver domain BO993_13120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BO993_13120 PF03466 LysR substrate binding domain BO993_13130 PF07690 Major Facilitator Superfamily BO993_13135 PF00512 His Kinase A (phospho-acceptor) domain BO993_13135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BO993_13150 PF00375 Sodium:dicarboxylate symporter family BO993_13155 PF01515 Phosphate acetyl/butaryl transferase BO993_13155 PF03949 Malic enzyme, NAD binding domain BO993_13155 PF00390 Malic enzyme, N-terminal domain BO993_13205 PF05598 Transposase domain (DUF772) BO993_13215 PF13276 HTH-like domain BO993_13215 PF00665 Integrase core domain BO993_13215 PF13333 Integrase core domain BO993_13230 PF02581 Thiamine monophosphate synthase BO993_13235 PF00301 Rubredoxin BO993_13240 PF13369 Transglutaminase-like superfamily BO993_13250 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BO993_13260 PF01812 5-formyltetrahydrofolate cyclo-ligase family BO993_13270 PF05164 Cell division protein ZapA BO993_13280 PF03695 Uncharacterised protein family (UPF0149) BO993_13285 PF00557 Metallopeptidase family M24 BO993_13285 PF05195 Aminopeptidase P, N-terminal domain BO993_13300 PF00557 Metallopeptidase family M24 BO993_13315 PF06969 HemN C-terminal domain BO993_13315 PF04055 Radical SAM superfamily BO993_13320 PF01725 Ham1 family BO993_13330 PF03725 3' exoribonuclease family, domain 2 BO993_13330 PF01138 3' exoribonuclease family, domain 1 BO993_13335 PF03755 YicC-like family, N-terminal region BO993_13335 PF08340 Domain of unknown function (DUF1732) BO993_13340 PF00625 Guanylate kinase BO993_13355 PF01192 RNA polymerase Rpb6 BO993_13360 PF04607 Region found in RelA / SpoT proteins BO993_13360 PF13291 ACT domain BO993_13360 PF02824 TGS domain BO993_13365 PF01042 Endoribonuclease L-PSP BO993_13370 PF00271 Helicase conserved C-terminal domain BO993_13370 PF17191 RecG wedge domain BO993_13370 PF00270 DEAD/DEAH box helicase BO993_13375 PF01156 Inosine-uridine preferring nucleoside hydrolase BO993_13380 PF01197 Ribosomal protein L31 BO993_13385 PF00285 Citrate synthase, C-terminal domain BO993_13395 PF17092 Penicillin-binding protein OB-like domain BO993_13395 PF00912 Transglycosylase BO993_13395 PF00905 Penicillin binding protein transpeptidase domain BO993_13420 PF11741 AMIN domain BO993_13420 PF00263 Bacterial type II and III secretion system protein BO993_13420 PF03958 Bacterial type II/III secretion system short domain BO993_13420 PF07660 Secretin and TonB N terminus short domain BO993_13435 PF07726 ATPase family associated with various cellular activities (AAA) BO993_13435 PF17863 AAA lid domain BO993_13455 PF00092 von Willebrand factor type A domain BO993_13455 PF07584 Aerotolerance regulator N-terminal BO993_13475 PF00375 Sodium:dicarboxylate symporter family BO993_13480 PF02779 Transketolase, pyrimidine binding domain BO993_13480 PF02780 Transketolase, C-terminal domain BO993_13480 PF00456 Transketolase, thiamine diphosphate binding domain BO993_13485 PF07715 TonB-dependent Receptor Plug Domain BO993_13485 PF00593 TonB dependent receptor BO993_13490 PF04225 Opacity-associated protein A LysM-like domain BO993_13490 PF01551 Peptidase family M23 BO993_13495 PF01476 LysM domain BO993_13495 PF03734 L,D-transpeptidase catalytic domain BO993_13520 PF00501 AMP-binding enzyme BO993_13540 PF00486 Transcriptional regulatory protein, C terminal BO993_13540 PF00072 Response regulator receiver domain BO993_13545 PF00512 His Kinase A (phospho-acceptor) domain BO993_13545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BO993_13545 PF08521 Two-component sensor kinase N-terminal BO993_13565 PF00005 ABC transporter BO993_13565 PF03459 TOBE domain BO993_13570 PF00528 Binding-protein-dependent transport system inner membrane component BO993_13580 PF04273 Putative phosphatase (DUF442) BO993_13580 PF00753 Metallo-beta-lactamase superfamily BO993_13615 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BO993_13615 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BO993_13620 PF13340 Putative transposase of IS4/5 family (DUF4096) BO993_13635 PF00672 HAMP domain BO993_13635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BO993_13635 PF00512 His Kinase A (phospho-acceptor) domain BO993_13640 PF00486 Transcriptional regulatory protein, C terminal BO993_13640 PF00072 Response regulator receiver domain BO993_13650 PF08443 RimK-like ATP-grasp domain BO993_13650 PF18030 RimK PreATP-grasp domain BO993_13655 PF01609 Transposase DDE domain BO993_13655 PF05598 Transposase domain (DUF772) BO993_13690 PF00520 Ion transport protein BO993_13690 PF00027 Cyclic nucleotide-binding domain BO993_13695 PF00202 Aminotransferase class-III BO993_13715 PF00034 Cytochrome c BO993_13715 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BO993_13730 PF00155 Aminotransferase class I and II BO993_13740 PF00127 Copper binding proteins, plastocyanin/azurin family BO993_13750 PF00202 Aminotransferase class-III BO993_13840 PF01208 Uroporphyrinogen decarboxylase (URO-D) BO993_13850 PF01761 3-dehydroquinate synthase BO993_13855 PF01202 Shikimate kinase BO993_13860 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region BO993_13860 PF01243 Pyridoxamine 5'-phosphate oxidase BO993_13870 PF04012 PspA/IM30 family BO993_13895 PF03738 Glutathionylspermidine synthase preATP-grasp BO993_13905 PF09278 MerR, DNA binding BO993_13905 PF00376 MerR family regulatory protein BO993_13940 PF12706 Beta-lactamase superfamily domain BO993_13960 PF00324 Amino acid permease BO993_13965 PF00196 Bacterial regulatory proteins, luxR family BO993_13970 PF00561 alpha/beta hydrolase fold BO993_13980 PF00324 Amino acid permease BO993_13990 PF01654 Cytochrome bd terminal oxidase subunit I BO993_13995 PF02322 Cytochrome bd terminal oxidase subunit II BO993_14000 PF00756 Putative esterase BO993_14005 PF00571 CBS domain BO993_14005 PF03448 MgtE intracellular N domain BO993_14005 PF01769 Divalent cation transporter BO993_14010 PF02896 PEP-utilising enzyme, TIM barrel domain BO993_14010 PF05524 PEP-utilising enzyme, N-terminal BO993_14010 PF00391 PEP-utilising enzyme, mobile domain BO993_14015 PF00381 PTS HPr component phosphorylation site BO993_14025 PF03668 P-loop ATPase protein family BO993_14030 PF02603 HPr Serine kinase N terminus BO993_14030 PF07475 HPr Serine kinase C-terminal domain BO993_14035 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BO993_14040 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BO993_14045 PF04552 Sigma-54, DNA binding domain BO993_14045 PF04963 Sigma-54 factor, core binding domain BO993_14045 PF00309 Sigma-54 factor, Activator interacting domain (AID) BO993_14050 PF00005 ABC transporter BO993_14055 PF03968 OstA-like protein BO993_14070 PF01380 SIS domain BO993_14070 PF00571 CBS domain BO993_14075 PF01722 BolA-like protein BO993_14080 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BO993_14100 PF00551 Formyl transferase BO993_14115 PF02769 AIR synthase related protein, C-terminal domain BO993_14115 PF00586 AIR synthase related protein, N-terminal domain BO993_14125 PF01594 AI-2E family transporter BO993_14130 PF00308 Bacterial dnaA protein BO993_14135 PF00483 Nucleotidyl transferase BO993_14140 PF01636 Phosphotransferase enzyme family BO993_14160 PF07687 Peptidase dimerisation domain BO993_14160 PF01546 Peptidase family M20/M25/M40 BO993_14200 PF06964 Alpha-L-arabinofuranosidase C-terminal domain BO993_14205 PF01263 Aldose 1-epimerase BO993_14210 PF01578 Cytochrome C assembly protein BO993_14220 PF00448 SRP54-type protein, GTPase domain BO993_14220 PF02881 SRP54-type protein, helical bundle domain BO993_14220 PF02978 Signal peptide binding domain BO993_14235 PF03060 Nitronate monooxygenase BO993_14245 PF00886 Ribosomal protein S16 BO993_14250 PF01782 RimM N-terminal domain BO993_14250 PF05239 PRC-barrel domain BO993_14255 PF01746 tRNA (Guanine-1)-methyltransferase BO993_14260 PF01245 Ribosomal protein L19 BO993_14270 PF01554 MatE BO993_14275 PF01479 S4 domain BO993_14305 PF01541 GIY-YIG catalytic domain BO993_14310 PF17871 AAA lid domain BO993_14310 PF10431 C-terminal, D2-small domain, of ClpB protein BO993_14310 PF07724 AAA domain (Cdc48 subfamily) BO993_14310 PF02861 Clp amino terminal domain, pathogenicity island component BO993_14310 PF00004 ATPase family associated with various cellular activities (AAA) BO993_14325 PF01527 Transposase BO993_14340 PF07715 TonB-dependent Receptor Plug Domain BO993_14340 PF00593 TonB dependent receptor BO993_14365 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP BO993_14365 PF12557 Cob(I)alamin adenosyltransferase N terminal BO993_14375 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase BO993_14380 PF02277 Phosphoribosyltransferase BO993_14390 PF02654 Cobalamin-5-phosphate synthase BO993_14400 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BO993_14400 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BO993_14410 PF07690 Major Facilitator Superfamily BO993_14415 PF06276 Ferric iron reductase FhuF-like transporter BO993_14415 PF04183 IucA / IucC family BO993_14425 PF00593 TonB dependent receptor BO993_14425 PF07660 Secretin and TonB N terminus short domain BO993_14425 PF07715 TonB-dependent Receptor Plug Domain BO993_14435 PF13276 HTH-like domain BO993_14435 PF13683 Integrase core domain BO993_14440 PF00999 Sodium/hydrogen exchanger family BO993_14440 PF02254 TrkA-N domain BO993_14450 PF00593 TonB dependent receptor BO993_14450 PF07715 TonB-dependent Receptor Plug Domain BO993_14460 PF07715 TonB-dependent Receptor Plug Domain BO993_14460 PF00593 TonB dependent receptor BO993_14475 PF07715 TonB-dependent Receptor Plug Domain BO993_14475 PF00593 TonB dependent receptor BO993_14480 PF00005 ABC transporter BO993_14480 PF12848 ABC transporter BO993_14495 PF03466 LysR substrate binding domain BO993_14495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BO993_14505 PF07859 alpha/beta hydrolase fold BO993_14505 PF13472 GDSL-like Lipase/Acylhydrolase family BO993_14535 PF12833 Helix-turn-helix domain BO993_14540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BO993_14540 PF00183 Hsp90 protein BO993_14555 PF13276 HTH-like domain BO993_14585 PF01053 Cys/Met metabolism PLP-dependent enzyme BO993_14590 PF00266 Aminotransferase class-V BO993_14595 PF13683 Integrase core domain BO993_14595 PF13276 HTH-like domain BO993_14605 PF01609 Transposase DDE domain BO993_14605 PF05598 Transposase domain (DUF772) BO993_14610 PF00355 Rieske [2Fe-2S] domain BO993_14620 PF00266 Aminotransferase class-V BO993_14625 PF01458 Uncharacterized protein family (UPF0051) BO993_14630 PF00005 ABC transporter BO993_14635 PF01458 Uncharacterized protein family (UPF0051) BO993_14640 PF02082 Transcriptional regulator BO993_14695 PF14748 Pyrroline-5-carboxylate reductase dimerisation BO993_14695 PF03807 NADP oxidoreductase coenzyme F420-dependent BO993_14700 PF01168 Alanine racemase, N-terminal domain BO993_14705 PF00437 Type II/IV secretion system protein BO993_14710 PF00437 Type II/IV secretion system protein BO993_14730 PF13302 Acetyltransferase (GNAT) domain BO993_14730 PF03352 Methyladenine glycosylase BO993_14730 PF00117 Glutamine amidotransferase class-I BO993_14730 PF00958 GMP synthase C terminal domain BO993_14730 PF13673 Acetyltransferase (GNAT) domain BO993_14745 PF02622 Uncharacterized ACR, COG1678 BO993_14750 PF03652 Holliday junction resolvase BO993_14755 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BO993_14755 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BO993_14765 PF02566 OsmC-like protein BO993_14775 PF02567 Phenazine biosynthesis-like protein BO993_14780 PF02567 Phenazine biosynthesis-like protein BO993_14785 PF02567 Phenazine biosynthesis-like protein BO993_14790 PF00696 Amino acid kinase family BO993_14790 PF01842 ACT domain BO993_14805 PF08245 Mur ligase middle domain BO993_14820 PF00348 Polyprenyl synthetase BO993_14825 PF00436 Single-strand binding protein family BO993_14835 PF00360 Phytochrome region BO993_14835 PF00990 Diguanylate cyclase, GGDEF domain BO993_14835 PF00563 EAL domain BO993_14835 PF01590 GAF domain BO993_14850 PF08659 KR domain BO993_14850 PF02801 Beta-ketoacyl synthase, C-terminal domain BO993_14850 PF00550 Phosphopantetheine attachment site BO993_14850 PF14765 Polyketide synthase dehydratase BO993_14850 PF08240 Alcohol dehydrogenase GroES-like domain BO993_14850 PF00698 Acyl transferase domain BO993_14850 PF16197 Ketoacyl-synthetase C-terminal extension BO993_14850 PF00107 Zinc-binding dehydrogenase BO993_14850 PF00109 Beta-ketoacyl synthase, N-terminal domain BO993_14885 PF04328 Selenoprotein, putative BO993_14890 PF13722 5TM C-terminal transporter carbon starvation CstA BO993_14890 PF02554 Carbon starvation protein CstA BO993_14895 PF02678 Pirin BO993_14895 PF05726 Pirin C-terminal cupin domain BO993_14950 PF02678 Pirin BO993_14950 PF05726 Pirin C-terminal cupin domain BO993_14960 PF04493 Endonuclease V BO993_14965 PF00300 Histidine phosphatase superfamily (branch 1) BO993_14985 PF05649 Peptidase family M13 BO993_14985 PF01431 Peptidase family M13 BO993_14995 PF01339 CheB methylesterase BO993_14995 PF00072 Response regulator receiver domain BO993_15000 PF03705 CheR methyltransferase, all-alpha domain BO993_15000 PF01739 CheR methyltransferase, SAM binding domain BO993_15005 PF13426 PAS domain BO993_15005 PF00563 EAL domain BO993_15005 PF00990 Diguanylate cyclase, GGDEF domain BO993_15010 PF01584 CheW-like domain BO993_15015 PF02203 Tar ligand binding domain homologue BO993_15015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BO993_15015 PF00672 HAMP domain BO993_15020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BO993_15020 PF01627 Hpt domain BO993_15020 PF09078 CheY binding BO993_15020 PF02895 Signal transducing histidine kinase, homodimeric domain BO993_15020 PF01584 CheW-like domain BO993_15030 PF03461 TRCF domain BO993_15030 PF17757 UvrB interaction domain BO993_15030 PF00270 DEAD/DEAH box helicase BO993_15030 PF00271 Helicase conserved C-terminal domain BO993_15030 PF02559 CarD-like/TRCF domain BO993_15040 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ BO993_15055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BO993_15055 PF00512 His Kinase A (phospho-acceptor) domain BO993_15055 PF00672 HAMP domain BO993_15095 PF05598 Transposase domain (DUF772) BO993_15095 PF01609 Transposase DDE domain BO993_15130 PF00749 tRNA synthetases class I (E and Q), catalytic domain BO993_15135 PF01475 Ferric uptake regulator family BO993_15165 PF00313 'Cold-shock' DNA-binding domain BO993_15180 PF00899 ThiF family BO993_15185 PF01026 TatD related DNase BO993_15200 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BO993_15200 PF02770 Acyl-CoA dehydrogenase, middle domain BO993_15200 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BO993_15220 PF13417 Glutathione S-transferase, N-terminal domain BO993_15225 PF13537 Glutamine amidotransferase domain BO993_15225 PF00733 Asparagine synthase BO993_15230 PF03358 NADPH-dependent FMN reductase BO993_15235 PF00772 DnaB-like helicase N terminal domain BO993_15235 PF03796 DnaB-like helicase C terminal domain BO993_15240 PF03441 FAD binding domain of DNA photolyase BO993_15240 PF00875 DNA photolyase BO993_15255 PF00691 OmpA family BO993_15255 PF05736 OprF membrane domain BO993_15280 PF07715 TonB-dependent Receptor Plug Domain BO993_15280 PF00593 TonB dependent receptor BO993_15300 PF00107 Zinc-binding dehydrogenase BO993_15300 PF08240 Alcohol dehydrogenase GroES-like domain BO993_15305 PF00654 Voltage gated chloride channel BO993_15315 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BO993_15315 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BO993_15320 PF02805 Metal binding domain of Ada BO993_15320 PF12833 Helix-turn-helix domain BO993_15320 PF00730 HhH-GPD superfamily base excision DNA repair protein BO993_15320 PF06029 AlkA N-terminal domain BO993_15370 PF03880 DbpA RNA binding domain BO993_15370 PF00270 DEAD/DEAH box helicase BO993_15370 PF00271 Helicase conserved C-terminal domain BO993_15375 PF08448 PAS fold BO993_15375 PF00990 Diguanylate cyclase, GGDEF domain BO993_15375 PF00563 EAL domain BO993_15380 PF00849 RNA pseudouridylate synthase BO993_15380 PF01479 S4 domain BO993_15400 PF03737 Aldolase/RraA BO993_15405 PF00144 Beta-lactamase BO993_15410 PF00999 Sodium/hydrogen exchanger family BO993_15415 PF00672 HAMP domain BO993_15415 PF00512 His Kinase A (phospho-acceptor) domain BO993_15415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BO993_15420 PF00486 Transcriptional regulatory protein, C terminal BO993_15420 PF00072 Response regulator receiver domain BO993_15425 PF02321 Outer membrane efflux protein BO993_15440 PF00873 AcrB/AcrD/AcrF family BO993_15450 PF00005 ABC transporter BO993_15450 PF00664 ABC transporter transmembrane region BO993_15460 PF13340 Putative transposase of IS4/5 family (DUF4096) BO993_15475 PF05598 Transposase domain (DUF772) BO993_15475 PF01609 Transposase DDE domain BO993_15480 PF01609 Transposase DDE domain BO993_15480 PF05598 Transposase domain (DUF772) BO993_15495 PF05598 Transposase domain (DUF772) BO993_15495 PF01609 Transposase DDE domain BO993_15510 PF01121 Dephospho-CoA kinase BO993_15515 PF01478 Type IV leader peptidase family BO993_15515 PF06750 Bacterial Peptidase A24 N-terminal domain BO993_15520 PF00482 Type II secretion system (T2SS), protein F BO993_15525 PF07963 Prokaryotic N-terminal methylation motif BO993_15525 PF00114 Pilin (bacterial filament) BO993_15530 PF08019 Phosphoethanolamine transferase EptA/EptB BO993_15530 PF00884 Sulfatase BO993_15545 PF00437 Type II/IV secretion system protein BO993_15545 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BO993_15550 PF02661 Fic/DOC family BO993_15550 PF18543 Intracellular delivery domain BO993_15560 PF02954 Bacterial regulatory protein, Fis family BO993_15560 PF00072 Response regulator receiver domain BO993_15560 PF00158 Sigma-54 interaction domain BO993_15565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BO993_15565 PF00512 His Kinase A (phospho-acceptor) domain BO993_15570 PF00549 CoA-ligase BO993_15570 PF08442 ATP-grasp domain BO993_15575 PF00549 CoA-ligase BO993_15575 PF02629 CoA binding domain BO993_15585 PF00795 Carbon-nitrogen hydrolase BO993_15585 PF02540 NAD synthase BO993_15590 PF13525 Outer membrane lipoprotein BO993_15595 PF00849 RNA pseudouridylate synthase BO993_15615 PF00982 Glycosyltransferase family 20 BO993_15620 PF00723 Glycosyl hydrolases family 15 BO993_15625 PF02358 Trehalose-phosphatase BO993_15635 PF07715 TonB-dependent Receptor Plug Domain BO993_15635 PF00593 TonB dependent receptor BO993_15665 PF04376 Arginine-tRNA-protein transferase, N terminus BO993_15665 PF04377 Arginine-tRNA-protein transferase, C terminus BO993_15680 PF04542 Sigma-70 region 2 BO993_15680 PF08281 Sigma-70, region 4 BO993_15695 PF00378 Enoyl-CoA hydratase/isomerase BO993_15710 PF17760 UvrA interaction domain BO993_15710 PF00005 ABC transporter BO993_15710 PF17755 UvrA DNA-binding domain BO993_15715 PF00829 Ribosomal prokaryotic L21 protein BO993_15720 PF01016 Ribosomal L27 protein BO993_15725 PF01018 GTP1/OBG BO993_15725 PF01926 50S ribosome-binding GTPase BO993_15730 PF01649 Ribosomal protein S20 BO993_15735 PF03023 Lipid II flippase MurJ BO993_15740 PF06574 FAD synthetase BO993_15740 PF01687 Riboflavin kinase BO993_15745 PF00133 tRNA synthetases class I (I, L, M and V) BO993_15745 PF06827 Zinc finger found in FPG and IleRS BO993_15745 PF08264 Anticodon-binding domain of tRNA BO993_15750 PF01252 Signal peptidase (SPase) II BO993_15755 PF02401 LytB protein BO993_15765 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BO993_15765 PF06481 COX Aromatic Rich Motif BO993_15770 PF00115 Cytochrome C and Quinol oxidase polypeptide I BO993_15775 PF00510 Cytochrome c oxidase subunit III BO993_15780 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BO993_15790 PF04717 Type VI secretion system, phage-baseplate injector BO993_15855 PF01527 Transposase BO993_15860 PF13683 Integrase core domain BO993_15860 PF13276 HTH-like domain BO993_15885 PF13276 HTH-like domain BO993_15885 PF13683 Integrase core domain BO993_15890 PF01527 Transposase BO993_15900 PF18073 Rubredoxin metal binding domain BO993_15920 PF04185 Phosphoesterase family BO993_15920 PF05506 Domain of unknown function (DUF756) BO993_15925 PF05506 Domain of unknown function (DUF756) BO993_15925 PF04185 Phosphoesterase family BO993_15930 PF05506 Domain of unknown function (DUF756) BO993_15930 PF04185 Phosphoesterase family BO993_15950 PF01336 OB-fold nucleic acid binding domain BO993_15950 PF00152 tRNA synthetases class II (D, K and N) BO993_15950 PF02938 GAD domain BO993_15965 PF01709 Transcriptional regulator BO993_15970 PF02075 Crossover junction endodeoxyribonuclease RuvC BO993_15975 PF01330 RuvA N terminal domain BO993_15975 PF07499 RuvA, C-terminal domain BO993_15980 PF02705 K+ potassium transporter BO993_15985 PF17864 RuvB AAA lid domain BO993_15985 PF05491 RuvB C-terminal winged helix domain BO993_15985 PF05496 Holliday junction DNA helicase RuvB P-loop domain BO993_15990 PF03061 Thioesterase superfamily BO993_15995 PF01618 MotA/TolQ/ExbB proton channel family BO993_16000 PF02472 Biopolymer transport protein ExbD/TolR BO993_16010 PF04052 TolB amino-terminal domain BO993_16010 PF07676 WD40-like Beta Propeller Repeat BO993_16015 PF00691 OmpA family BO993_16025 PF04055 Radical SAM superfamily BO993_16030 PF01479 S4 domain BO993_16030 PF00849 RNA pseudouridylate synthase BO993_16080 PF13340 Putative transposase of IS4/5 family (DUF4096) BO993_16095 PF06508 Queuosine biosynthesis protein QueC BO993_16115 PF00271 Helicase conserved C-terminal domain BO993_16115 PF09382 RQC domain BO993_16115 PF16124 RecQ zinc-binding BO993_16115 PF00270 DEAD/DEAH box helicase BO993_16115 PF00570 HRDC domain BO993_16120 PF00210 Ferritin-like domain BO993_16125 PF00271 Helicase conserved C-terminal domain BO993_16125 PF04408 Helicase associated domain (HA2) BO993_16125 PF11898 Domain of unknown function (DUF3418) BO993_16125 PF00270 DEAD/DEAH box helicase BO993_16125 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold BO993_16135 PF02685 Glucokinase BO993_16140 PF02685 Glucokinase BO993_16145 PF02685 Glucokinase BO993_16160 PF13186 Iron-sulfur cluster-binding domain BO993_16160 PF04055 Radical SAM superfamily BO993_16165 PF05402 Coenzyme PQQ synthesis protein D (PqqD) BO993_16170 PF03070 TENA/THI-4/PQQC family BO993_16175 PF12706 Beta-lactamase superfamily domain BO993_16180 PF04607 Region found in RelA / SpoT proteins BO993_16180 PF02824 TGS domain BO993_16180 PF13291 ACT domain BO993_16190 PF00535 Glycosyl transferase family 2 BO993_16195 PF00912 Transglycosylase BO993_16195 PF00905 Penicillin binding protein transpeptidase domain BO993_16195 PF14814 Bifunctional transglycosylase second domain BO993_16205 PF04851 Type III restriction enzyme, res subunit BO993_16205 PF13307 Helicase C-terminal domain BO993_16210 PF00814 Glycoprotease family BO993_16215 PF03747 ADP-ribosylglycohydrolase BO993_16225 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain BO993_16225 PF02951 Prokaryotic glutathione synthetase, N-terminal domain BO993_16230 PF00072 Response regulator receiver domain BO993_16235 PF00072 Response regulator receiver domain BO993_16240 PF01584 CheW-like domain BO993_16245 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term BO993_16245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BO993_16250 PF01584 CheW-like domain BO993_16250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BO993_16250 PF01627 Hpt domain BO993_16250 PF00072 Response regulator receiver domain BO993_16265 PF13302 Acetyltransferase (GNAT) domain BO993_16270 PF01609 Transposase DDE domain BO993_16270 PF05598 Transposase domain (DUF772) BO993_16290 PF12034 Domain of unknown function (DUF3520) BO993_16290 PF00092 von Willebrand factor type A domain BO993_16290 PF12450 von Willebrand factor BO993_16305 PF01112 Asparaginase BO993_16310 PF03932 CutC family BO993_16345 PF01301 Glycosyl hydrolases family 35 BO993_16355 PF17678 Glycosyl hydrolase family 92 N-terminal domain BO993_16355 PF07971 Glycosyl hydrolase family 92 BO993_16395 PF00664 ABC transporter transmembrane region BO993_16395 PF03412 Peptidase C39 family BO993_16395 PF00005 ABC transporter BO993_16400 PF14310 Fibronectin type III-like domain BO993_16400 PF00933 Glycosyl hydrolase family 3 N terminal domain BO993_16400 PF01915 Glycosyl hydrolase family 3 C-terminal domain BO993_16400 PF07691 PA14 domain BO993_16410 PF07691 PA14 domain BO993_16410 PF00728 Glycosyl hydrolase family 20, catalytic domain BO993_16410 PF02838 Glycosyl hydrolase family 20, domain 2 BO993_16420 PF00704 Glycosyl hydrolases family 18 BO993_16420 PF01476 LysM domain BO993_16435 PF02685 Glucokinase BO993_16440 PF04452 RNA methyltransferase BO993_16445 PF00202 Aminotransferase class-III BO993_16450 PF00293 NUDIX domain BO993_16455 PF00459 Inositol monophosphatase family BO993_16460 PF03819 MazG nucleotide pyrophosphohydrolase domain BO993_16475 PF01145 SPFH domain / Band 7 family BO993_16475 PF16200 C-terminal region of band_7 BO993_16485 PF01571 Aminomethyltransferase folate-binding domain BO993_16485 PF08669 Glycine cleavage T-protein C-terminal barrel domain BO993_16490 PF01597 Glycine cleavage H-protein BO993_16515 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BO993_16515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BO993_16515 PF09317 Domain of unknown function (DUF1974) BO993_16520 PF00561 alpha/beta hydrolase fold BO993_16525 PF00440 Bacterial regulatory proteins, tetR family BO993_16530 PF07715 TonB-dependent Receptor Plug Domain BO993_16530 PF00593 TonB dependent receptor BO993_16540 PF01430 Hsp33 protein BO993_16545 PF00912 Transglycosylase BO993_16550 PF00535 Glycosyl transferase family 2 BO993_16555 PF00478 IMP dehydrogenase / GMP reductase domain BO993_16555 PF00571 CBS domain BO993_16565 PF03006 Haemolysin-III related BO993_16570 PF16658 Class II release factor RF3, C-terminal domain BO993_16570 PF00009 Elongation factor Tu GTP binding domain BO993_16575 PF01476 LysM domain BO993_16575 PF08525 Opacity-associated protein A N-terminal motif BO993_16575 PF01551 Peptidase family M23 BO993_16580 PF00561 alpha/beta hydrolase fold BO993_16585 PF01053 Cys/Met metabolism PLP-dependent enzyme BO993_16595 PF03315 Serine dehydratase beta chain BO993_16595 PF03313 Serine dehydratase alpha chain BO993_16605 PF04264 YceI-like domain BO993_16615 PF04264 YceI-like domain BO993_16620 PF00072 Response regulator receiver domain BO993_16620 PF01627 Hpt domain BO993_16620 PF00512 His Kinase A (phospho-acceptor) domain BO993_16620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BO993_16620 PF00672 HAMP domain BO993_16620 PF17149 Periplasmic sensor domain found in signal transduction proteins BO993_16625 PF00672 HAMP domain BO993_16625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BO993_16625 PF01627 Hpt domain BO993_16625 PF00512 His Kinase A (phospho-acceptor) domain BO993_16625 PF00072 Response regulator receiver domain BO993_16625 PF17149 Periplasmic sensor domain found in signal transduction proteins BO993_16630 PF00072 Response regulator receiver domain BO993_16630 PF00672 HAMP domain BO993_16630 PF17149 Periplasmic sensor domain found in signal transduction proteins BO993_16630 PF00512 His Kinase A (phospho-acceptor) domain BO993_16630 PF01627 Hpt domain BO993_16630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BO993_16650 PF01527 Transposase BO993_16685 PF06114 IrrE N-terminal-like domain BO993_16685 PF09856 Predicted transcriptional regulator (DUF2083) BO993_16685 PF01381 Helix-turn-helix BO993_16690 PF00171 Aldehyde dehydrogenase family BO993_16695 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BO993_16695 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BO993_16695 PF02770 Acyl-CoA dehydrogenase, middle domain BO993_16700 PF00378 Enoyl-CoA hydratase/isomerase BO993_16705 PF00378 Enoyl-CoA hydratase/isomerase BO993_16705 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BO993_16705 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BO993_16710 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BO993_16710 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BO993_16715 PF01545 Cation efflux family BO993_16720 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BO993_16720 PF00378 Enoyl-CoA hydratase/isomerase BO993_16720 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BO993_16725 PF08281 Sigma-70, region 4 BO993_16725 PF04542 Sigma-70 region 2 BO993_16735 PF13180 PDZ domain BO993_16740 PF06421 GTP-binding protein LepA C-terminus BO993_16740 PF03144 Elongation factor Tu domain 2 BO993_16740 PF00009 Elongation factor Tu GTP binding domain BO993_16740 PF00679 Elongation factor G C-terminus BO993_16745 PF10502 Signal peptidase, peptidase S26 BO993_16755 PF00035 Double-stranded RNA binding motif BO993_16755 PF14622 Ribonuclease-III-like BO993_16760 PF01926 50S ribosome-binding GTPase BO993_16760 PF07650 KH domain BO993_16765 PF02565 Recombination protein O C terminal BO993_16765 PF11967 Recombination protein O N terminal BO993_16775 PF05958 tRNA (Uracil-5-)-methyltransferase BO993_16790 PF01609 Transposase DDE domain BO993_16790 PF05598 Transposase domain (DUF772) BO993_16815 PF01323 DSBA-like thioredoxin domain BO993_16825 PF04244 Deoxyribodipyrimidine photo-lyase-related protein BO993_16830 PF00933 Glycosyl hydrolase family 3 N terminal domain BO993_16840 PF01048 Phosphorylase superfamily BO993_16845 PF00313 'Cold-shock' DNA-binding domain BO993_16850 PF01494 FAD binding domain BO993_16870 PF08494 DEAD/H associated BO993_16870 PF00271 Helicase conserved C-terminal domain BO993_16870 PF00270 DEAD/DEAH box helicase BO993_16875 PF04679 ATP dependent DNA ligase C terminal region BO993_16875 PF01068 ATP dependent DNA ligase domain BO993_16875 PF04675 DNA ligase N terminus BO993_16885 PF01068 ATP dependent DNA ligase domain BO993_16885 PF04679 ATP dependent DNA ligase C terminal region BO993_16885 PF04675 DNA ligase N terminus BO993_16900 PF00072 Response regulator receiver domain BO993_16900 PF00990 Diguanylate cyclase, GGDEF domain BO993_16915 PF00108 Thiolase, N-terminal domain BO993_16915 PF02803 Thiolase, C-terminal domain BO993_16920 PF00082 Subtilase family BO993_16920 PF03797 Autotransporter beta-domain BO993_16920 PF12951 Passenger-associated-transport-repeat BO993_16925 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BO993_16925 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BO993_16935 PF01863 Protein of unknown function DUF45 BO993_16940 PF07043 Protein of unknown function (DUF1328) BO993_16950 PF01258 Prokaryotic dksA/traR C4-type zinc finger BO993_17000 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BO993_17015 PF08274 PhnA Zinc-Ribbon BO993_17015 PF03831 PhnA domain BO993_17025 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BO993_17030 PF07690 Major Facilitator Superfamily BO993_17040 PF01609 Transposase DDE domain BO993_17040 PF05598 Transposase domain (DUF772) BO993_17070 PF03706 Lysylphosphatidylglycerol synthase TM region BO993_17070 PF09924 Uncharacterised conserved protein (DUF2156) BO993_17080 PF01042 Endoribonuclease L-PSP BO993_17125 PF04542 Sigma-70 region 2 BO993_17125 PF04545 Sigma-70, region 4 BO993_17145 PF04060 Putative Fe-S cluster BO993_17155 PF01588 Putative tRNA binding domain BO993_17155 PF09334 tRNA synthetases class I (M) BO993_17175 PF00324 Amino acid permease BO993_17180 PF02574 Homocysteine S-methyltransferase BO993_17195 PF02592 Putative vitamin uptake transporter BO993_17315 PF13732 Domain of unknown function (DUF4162) BO993_17315 PF00005 ABC transporter BO993_17320 PF00593 TonB dependent receptor BO993_17320 PF07715 TonB-dependent Receptor Plug Domain BO993_17330 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BO993_17335 PF07733 Bacterial DNA polymerase III alpha NTPase domain BO993_17335 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BO993_17335 PF14579 Helix-hairpin-helix motif BO993_17335 PF02811 PHP domain BO993_17335 PF01336 OB-fold nucleic acid binding domain BO993_17340 PF01351 Ribonuclease HII BO993_17345 PF02684 Lipid-A-disaccharide synthetase BO993_17350 PF00132 Bacterial transferase hexapeptide (six repeats) BO993_17350 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 BO993_17355 PF07977 FabA-like domain BO993_17360 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD BO993_17360 PF00132 Bacterial transferase hexapeptide (six repeats) BO993_17365 PF01103 Surface antigen BO993_17365 PF07244 Surface antigen variable number repeat BO993_17370 PF02163 Peptidase family M50 BO993_17370 PF17820 PDZ domain BO993_17375 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BO993_17375 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BO993_17375 PF13288 DXP reductoisomerase C-terminal domain BO993_17385 PF01255 Putative undecaprenyl diphosphate synthase BO993_17390 PF01765 Ribosome recycling factor BO993_17395 PF00696 Amino acid kinase family BO993_17405 PF00889 Elongation factor TS BO993_17410 PF00318 Ribosomal protein S2 BO993_17445 PF00557 Metallopeptidase family M24 BO993_17450 PF01909 Nucleotidyltransferase domain BO993_17450 PF08335 GlnD PII-uridylyltransferase BO993_17450 PF01966 HD domain BO993_17455 PF01609 Transposase DDE domain BO993_17455 PF05598 Transposase domain (DUF772) BO993_17460 PF00132 Bacterial transferase hexapeptide (six repeats) BO993_17460 PF14602 Hexapeptide repeat of succinyl-transferase BO993_17460 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal BO993_17470 PF03960 ArsC family BO993_17480 PF01546 Peptidase family M20/M25/M40 BO993_17480 PF07687 Peptidase dimerisation domain BO993_17485 PF13537 Glutamine amidotransferase domain BO993_17485 PF00733 Asparagine synthase BO993_17500 PF00593 TonB dependent receptor BO993_17500 PF07715 TonB-dependent Receptor Plug Domain BO993_17515 PF01804 Penicillin amidase BO993_17520 PF00210 Ferritin-like domain BO993_17525 PF00521 DNA gyrase/topoisomerase IV, subunit A BO993_17525 PF03989 DNA gyrase C-terminal domain, beta-propeller BO993_17530 PF12833 Helix-turn-helix domain BO993_17540 PF02321 Outer membrane efflux protein BO993_17545 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BO993_17545 PF00529 HlyD membrane-fusion protein of T1SS BO993_17550 PF07690 Major Facilitator Superfamily BO993_17585 PF13683 Integrase core domain BO993_17585 PF13276 HTH-like domain BO993_17610 PF02779 Transketolase, pyrimidine binding domain BO993_17610 PF02780 Transketolase, C-terminal domain BO993_17610 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BO993_17620 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BO993_17620 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BO993_17620 PF02770 Acyl-CoA dehydrogenase, middle domain BO993_17620 PF12806 Acetyl-CoA dehydrogenase C-terminal like BO993_17640 PF01668 SmpB protein BO993_17645 PF03364 Polyketide cyclase / dehydrase and lipid transport BO993_17650 PF03658 RnfH family Ubiquitin BO993_17655 PF04355 SmpA / OmlA family BO993_17660 PF01475 Ferric uptake regulator family BO993_17665 PF02463 RecF/RecN/SMC N terminal domain BO993_17670 PF01628 HrcA protein C terminal domain BO993_17670 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding BO993_17675 PF01025 GrpE BO993_17680 PF00012 Hsp70 protein BO993_17685 PF00226 DnaJ domain BO993_17685 PF01556 DnaJ C terminal domain BO993_17685 PF00684 DnaJ central domain BO993_17690 PF08543 Phosphomethylpyrimidine kinase BO993_17695 PF01817 Chorismate mutase type II BO993_17695 PF02153 Prephenate dehydrogenase BO993_17710 PF03466 LysR substrate binding domain BO993_17710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BO993_17720 PF00005 ABC transporter BO993_17720 PF00664 ABC transporter transmembrane region BO993_17725 PF01205 Uncharacterized protein family UPF0029 BO993_17730 PF03641 Possible lysine decarboxylase BO993_17735 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BO993_17735 PF07992 Pyridine nucleotide-disulphide oxidoreductase BO993_17740 PF00364 Biotin-requiring enzyme BO993_17740 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BO993_17740 PF02817 e3 binding domain BO993_17745 PF00676 Dehydrogenase E1 component BO993_17745 PF16870 2-oxoglutarate dehydrogenase C-terminal BO993_17745 PF02779 Transketolase, pyrimidine binding domain BO993_17745 PF16078 2-oxoglutarate dehydrogenase N-terminus BO993_17755 PF08007 Cupin superfamily protein BO993_17775 PF00206 Lyase BO993_17775 PF08328 Adenylosuccinate lyase C-terminal BO993_17790 PF10415 Fumarase C C-terminus BO993_17790 PF00206 Lyase BO993_17820 PF00005 ABC transporter BO993_17825 PF00392 Bacterial regulatory proteins, gntR family BO993_17835 PF00255 Glutathione peroxidase BO993_17840 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BO993_17840 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BO993_17845 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BO993_17845 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BO993_17845 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BO993_17850 PF04102 SlyX BO993_17870 PF07690 Major Facilitator Superfamily BO993_17875 PF00294 pfkB family carbohydrate kinase BO993_17885 PF02574 Homocysteine S-methyltransferase BO993_17885 PF00809 Pterin binding enzyme BO993_17885 PF02965 Vitamin B12 dependent methionine synthase, activation domain BO993_17885 PF02607 B12 binding domain BO993_17885 PF02310 B12 binding domain BO993_17890 PF00809 Pterin binding enzyme BO993_17890 PF02574 Homocysteine S-methyltransferase BO993_17895 PF01209 ubiE/COQ5 methyltransferase family BO993_17900 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BO993_17900 PF02770 Acyl-CoA dehydrogenase, middle domain BO993_17900 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BO993_17925 PF00575 S1 RNA binding domain BO993_17925 PF17876 Cold shock domain BO993_17925 PF08461 Ribonuclease R winged-helix domain BO993_17925 PF08206 Ribonuclease B OB domain BO993_17925 PF00773 RNB domain BO993_17950 PF08032 RNA 2'-O ribose methyltransferase substrate binding BO993_17950 PF00588 SpoU rRNA Methylase family BO993_17960 PF05598 Transposase domain (DUF772) BO993_17960 PF01609 Transposase DDE domain BO993_17975 PF00561 alpha/beta hydrolase fold BO993_18025 PF13683 Integrase core domain BO993_18025 PF13276 HTH-like domain BO993_18040 PF03544 Gram-negative bacterial TonB protein C-terminal BO993_18045 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BO993_18045 PF02403 Seryl-tRNA synthetase N-terminal domain BO993_18075 PF02525 Flavodoxin-like fold BO993_18080 PF03466 LysR substrate binding domain BO993_18080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BO993_18100 PF03377 TAL effector repeat BO993_18125 PF13333 Integrase core domain BO993_18125 PF13276 HTH-like domain BO993_18125 PF00665 Integrase core domain BO993_18165 PF03079 ARD/ARD' family BO993_18170 PF00596 Class II Aldolase and Adducin N-terminal domain BO993_18175 PF13520 Amino acid permease BO993_18180 PF13520 Amino acid permease BO993_18190 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BO993_18190 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BO993_18195 PF02913 FAD linked oxidases, C-terminal domain BO993_18195 PF01565 FAD binding domain BO993_18215 PF03918 Cytochrome C biogenesis protein BO993_18220 PF08534 Redoxin BO993_18225 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal BO993_18225 PF01578 Cytochrome C assembly protein BO993_18230 PF03100 CcmE BO993_18240 PF01578 Cytochrome C assembly protein BO993_18245 PF03379 CcmB protein BO993_18250 PF00005 ABC transporter BO993_18255 PF00155 Aminotransferase class I and II BO993_18260 PF00795 Carbon-nitrogen hydrolase BO993_18280 PF00849 RNA pseudouridylate synthase BO993_18280 PF01479 S4 domain BO993_18285 PF04079 Segregation and condensation complex subunit ScpB BO993_18290 PF02616 Segregation and condensation protein ScpA BO993_18295 PF03795 YCII-related domain BO993_18325 PF00528 Binding-protein-dependent transport system inner membrane component BO993_18330 PF00528 Binding-protein-dependent transport system inner membrane component BO993_18355 PF00795 Carbon-nitrogen hydrolase BO993_18365 PF04371 Porphyromonas-type peptidyl-arginine deiminase BO993_18375 PF00444 Ribosomal protein L36 BO993_18380 PF02224 Cytidylate kinase BO993_18385 PF00575 S1 RNA binding domain BO993_18390 PF00216 Bacterial DNA-binding protein BO993_18400 PF18073 Rubredoxin metal binding domain BO993_18405 PF00953 Glycosyl transferase family 4 BO993_18410 PF02719 Polysaccharide biosynthesis protein BO993_18415 PF00483 Nucleotidyl transferase BO993_18420 PF02254 TrkA-N domain BO993_18420 PF00999 Sodium/hydrogen exchanger family BO993_18450 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BO993_18450 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BO993_18455 PF00571 CBS domain BO993_18455 PF00478 IMP dehydrogenase / GMP reductase domain BO993_18460 PF02540 NAD synthase BO993_18460 PF00958 GMP synthase C terminal domain BO993_18460 PF00117 Glutamine amidotransferase class-I BO993_18465 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) BO993_18470 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus BO993_18470 PF00361 Proton-conducting membrane transporter BO993_18470 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BO993_18475 PF03466 LysR substrate binding domain BO993_18475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BO993_18500 PF03601 Conserved hypothetical protein 698 BO993_18505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BO993_18505 PF03466 LysR substrate binding domain BO993_18510 PF03466 LysR substrate binding domain BO993_18510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BO993_18525 PF01566 Natural resistance-associated macrophage protein BO993_18530 PF01325 Iron dependent repressor, N-terminal DNA binding domain BO993_18530 PF02742 Iron dependent repressor, metal binding and dimerisation domain BO993_18535 PF14437 MafB19-like deaminase BO993_18540 PF00929 Exonuclease BO993_18545 PF05552 Conserved TM helix BO993_18545 PF00924 Mechanosensitive ion channel BO993_18550 PF02896 PEP-utilising enzyme, TIM barrel domain BO993_18550 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BO993_18550 PF00391 PEP-utilising enzyme, mobile domain BO993_18555 PF03618 Kinase/pyrophosphorylase BO993_18575 PF01066 CDP-alcohol phosphatidyltransferase BO993_18585 PF00561 alpha/beta hydrolase fold BO993_18600 PF00355 Rieske [2Fe-2S] domain BO993_18600 PF01266 FAD dependent oxidoreductase BO993_18610 PF17674 HHH domain BO993_18610 PF16921 Tex protein YqgF-like domain BO993_18610 PF09371 Tex-like protein N-terminal domain BO993_18610 PF00575 S1 RNA binding domain BO993_18625 PF00072 Response regulator receiver domain BO993_18635 PF04551 GcpE protein BO993_18640 PF01569 PAP2 superfamily BO993_18650 PF07690 Major Facilitator Superfamily BO993_18660 PF01177 Asp/Glu/Hydantoin racemase BO993_18665 PF00892 EamA-like transporter family BO993_18670 PF01565 FAD binding domain BO993_18670 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BO993_18675 PF01180 Dihydroorotate dehydrogenase BO993_18690 PF00171 Aldehyde dehydrogenase family BO993_18700 PF03073 TspO/MBR family BO993_18705 PF03447 Homoserine dehydrogenase, NAD binding domain BO993_18705 PF00742 Homoserine dehydrogenase BO993_18705 PF01842 ACT domain BO993_18705 PF00696 Amino acid kinase family BO993_18705 PF13840 ACT domain BO993_18710 PF08544 GHMP kinases C terminal BO993_18710 PF00288 GHMP kinases N terminal domain BO993_18725 PF00291 Pyridoxal-phosphate dependent enzyme BO993_18725 PF14821 Threonine synthase N terminus BO993_18740 PF13393 Histidyl-tRNA synthetase BO993_18740 PF03129 Anticodon binding domain BO993_18765 PF08029 HisG, C-terminal domain BO993_18765 PF01634 ATP phosphoribosyltransferase BO993_18770 PF00815 Histidinol dehydrogenase BO993_18775 PF00155 Aminotransferase class I and II BO993_18780 PF00475 Imidazoleglycerol-phosphate dehydratase BO993_18785 PF00117 Glutamine amidotransferase class-I BO993_18790 PF00977 Histidine biosynthesis protein BO993_18795 PF00977 Histidine biosynthesis protein BO993_18800 PF01502 Phosphoribosyl-AMP cyclohydrolase BO993_18800 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BO993_18955 PF13340 Putative transposase of IS4/5 family (DUF4096) BO993_18975 PF03377 TAL effector repeat BO993_19005 PF01609 Transposase DDE domain BO993_19005 PF05598 Transposase domain (DUF772) BO993_19030 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BO993_19050 PF01066 CDP-alcohol phosphatidyltransferase BO993_19055 PF02151 UvrB/uvrC motif BO993_19055 PF01541 GIY-YIG catalytic domain BO993_19055 PF08459 UvrC Helix-hairpin-helix N-terminal BO993_19065 PF01451 Low molecular weight phosphotyrosine protein phosphatase BO993_19070 PF02348 Cytidylyltransferase BO993_19075 PF02606 Tetraacyldisaccharide-1-P 4'-kinase BO993_19080 PF00664 ABC transporter transmembrane region BO993_19080 PF00005 ABC transporter BO993_19090 PF01618 MotA/TolQ/ExbB proton channel family BO993_19095 PF03772 Competence protein BO993_19095 PF00753 Metallo-beta-lactamase superfamily BO993_19110 PF00005 ABC transporter BO993_19115 PF12704 MacB-like periplasmic core domain BO993_19115 PF02687 FtsX-like permease family BO993_19125 PF03937 Flavinator of succinate dehydrogenase BO993_19130 PF13085 2Fe-2S iron-sulfur cluster binding domain BO993_19140 PF00890 FAD binding domain BO993_19140 PF02910 Fumarate reductase flavoprotein C-term BO993_19145 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BO993_19150 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BO993_19155 PF01571 Aminomethyltransferase folate-binding domain BO993_19165 PF00005 ABC transporter BO993_19165 PF17912 MalK OB fold domain BO993_19170 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BO993_19170 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BO993_19175 PF02685 Glucokinase BO993_19180 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BO993_19185 PF00920 Dehydratase family BO993_19190 PF01081 KDPG and KHG aldolase BO993_19195 PF05598 Transposase domain (DUF772) BO993_19210 PF13340 Putative transposase of IS4/5 family (DUF4096) BO993_19235 PF00672 HAMP domain BO993_19235 PF00072 Response regulator receiver domain BO993_19235 PF01627 Hpt domain BO993_19235 PF00512 His Kinase A (phospho-acceptor) domain BO993_19235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BO993_19235 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BO993_19250 PF01609 Transposase DDE domain BO993_19250 PF05598 Transposase domain (DUF772) BO993_19275 PF00990 Diguanylate cyclase, GGDEF domain BO993_19275 PF08448 PAS fold BO993_19300 PF02253 Phospholipase A1 BO993_19315 PF05681 Fumarate hydratase (Fumerase) BO993_19315 PF05683 Fumarase C-terminus BO993_19320 PF00005 ABC transporter BO993_19325 PF00175 Oxidoreductase NAD-binding domain BO993_19325 PF00970 Oxidoreductase FAD-binding domain BO993_19330 PF00255 Glutathione peroxidase BO993_19350 PF00082 Subtilase family BO993_19355 PF08281 Sigma-70, region 4 BO993_19355 PF04542 Sigma-70 region 2 BO993_19365 PF12802 MarR family BO993_19390 PF00854 POT family BO993_19400 PF14310 Fibronectin type III-like domain BO993_19400 PF01915 Glycosyl hydrolase family 3 C-terminal domain BO993_19400 PF00933 Glycosyl hydrolase family 3 N terminal domain BO993_19415 PF01590 GAF domain BO993_19415 PF00563 EAL domain BO993_19415 PF00990 Diguanylate cyclase, GGDEF domain BO993_19415 PF00360 Phytochrome region BO993_19425 PF00474 Sodium:solute symporter family BO993_19430 PF00933 Glycosyl hydrolase family 3 N terminal domain BO993_19430 PF14310 Fibronectin type III-like domain BO993_19430 PF01915 Glycosyl hydrolase family 3 C-terminal domain BO993_19450 PF00342 Phosphoglucose isomerase BO993_19455 PF02261 Aspartate decarboxylase BO993_19460 PF02569 Pantoate-beta-alanine ligase BO993_19465 PF02548 Ketopantoate hydroxymethyltransferase BO993_19470 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BO993_19475 PF01743 Poly A polymerase head domain BO993_19475 PF12626 Polymerase A arginine-rich C-terminus BO993_19475 PF12627 Probable RNA and SrmB- binding site of polymerase A BO993_19485 PF02649 Type I GTP cyclohydrolase folE2 BO993_19490 PF01520 N-acetylmuramoyl-L-alanine amidase BO993_19515 PF03797 Autotransporter beta-domain BO993_19515 PF00082 Subtilase family BO993_19520 PF13533 Biotin-lipoyl like BO993_19525 PF00873 AcrB/AcrD/AcrF family BO993_19530 PF02321 Outer membrane efflux protein BO993_19535 PF08448 PAS fold BO993_19535 PF13426 PAS domain BO993_19535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BO993_19535 PF00512 His Kinase A (phospho-acceptor) domain BO993_19535 PF00072 Response regulator receiver domain BO993_19540 PF00072 Response regulator receiver domain BO993_19540 PF00196 Bacterial regulatory proteins, luxR family BO993_19545 PF12951 Passenger-associated-transport-repeat BO993_19550 PF01527 Transposase BO993_19560 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BO993_19565 PF00800 Prephenate dehydratase BO993_19565 PF01842 ACT domain BO993_19565 PF01817 Chorismate mutase type II BO993_19570 PF00266 Aminotransferase class-V BO993_19575 PF00174 Oxidoreductase molybdopterin binding domain BO993_19585 PF01794 Ferric reductase like transmembrane component BO993_19610 PF07702 UTRA domain BO993_19610 PF00392 Bacterial regulatory proteins, gntR family BO993_19620 PF07969 Amidohydrolase family BO993_19625 PF00221 Aromatic amino acid lyase BO993_19635 PF01175 Urocanase Rossmann-like domain BO993_19635 PF17391 Urocanase N-terminal domain BO993_19635 PF17392 Urocanase C-terminal domain BO993_19650 PF13276 HTH-like domain BO993_19655 PF01527 Transposase BO993_19660 PF00521 DNA gyrase/topoisomerase IV, subunit A BO993_19660 PF03989 DNA gyrase C-terminal domain, beta-propeller BO993_19665 PF01008 Initiation factor 2 subunit family BO993_19690 PF00152 tRNA synthetases class II (D, K and N) BO993_19695 PF00533 BRCA1 C Terminus (BRCT) domain BO993_19695 PF12826 Helix-hairpin-helix motif BO993_19695 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BO993_19695 PF03120 NAD-dependent DNA ligase OB-fold domain BO993_19695 PF01653 NAD-dependent DNA ligase adenylation domain BO993_19705 PF04354 ZipA, C-terminal FtsZ-binding domain BO993_19710 PF02463 RecF/RecN/SMC N terminal domain BO993_19715 PF01281 Ribosomal protein L9, N-terminal domain BO993_19715 PF03948 Ribosomal protein L9, C-terminal domain BO993_19720 PF01084 Ribosomal protein S18 BO993_19725 PF01250 Ribosomal protein S6 BO993_19730 PF01521 Iron-sulphur cluster biosynthesis BO993_19735 PF01336 OB-fold nucleic acid binding domain BO993_19735 PF00152 tRNA synthetases class II (D, K and N) BO993_19765 PF00484 Carbonic anhydrase BO993_19770 PF06052 3-hydroxyanthranilic acid dioxygenase BO993_19780 PF00266 Aminotransferase class-V BO993_19785 PF01494 FAD binding domain BO993_19790 PF00929 Exonuclease BO993_19790 PF08411 Exonuclease C-terminal BO993_19800 PF00248 Aldo/keto reductase family BO993_19815 PF01513 ATP-NAD kinase BO993_19825 PF02926 THUMP domain BO993_19825 PF10672 S-adenosylmethionine-dependent methyltransferase BO993_19825 PF01170 Putative RNA methylase family UPF0020 BO993_19835 PF00005 ABC transporter BO993_19835 PF12848 ABC transporter BO993_19840 PF00005 ABC transporter BO993_19845 PF00005 ABC transporter BO993_19875 PF00581 Rhodanese-like domain BO993_19880 PF00293 NUDIX domain BO993_19885 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BO993_19885 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BO993_19890 PF00378 Enoyl-CoA hydratase/isomerase BO993_19900 PF00633 Helix-hairpin-helix motif BO993_19900 PF10576 Iron-sulfur binding domain of endonuclease III BO993_19900 PF00730 HhH-GPD superfamily base excision DNA repair protein BO993_19910 PF00484 Carbonic anhydrase BO993_19925 PF13340 Putative transposase of IS4/5 family (DUF4096) BO993_19940 PF12849 PBP superfamily domain BO993_19945 PF12849 PBP superfamily domain BO993_19950 PF00528 Binding-protein-dependent transport system inner membrane component BO993_19955 PF00528 Binding-protein-dependent transport system inner membrane component BO993_19960 PF00005 ABC transporter BO993_19965 PF01895 PhoU domain BO993_19975 PF00929 Exonuclease BO993_20010 PF00589 Phage integrase family BO993_20010 PF13495 Phage integrase, N-terminal SAM-like domain BO993_20015 PF02355 Protein export membrane protein BO993_20015 PF07549 SecD/SecF GG Motif BO993_20020 PF02355 Protein export membrane protein BO993_20020 PF13721 SecD export protein N-terminal TM region BO993_20020 PF07549 SecD/SecF GG Motif BO993_20025 PF02699 Preprotein translocase subunit BO993_20030 PF01702 Queuine tRNA-ribosyltransferase BO993_20035 PF02547 Queuosine biosynthesis protein BO993_20070 PF05598 Transposase domain (DUF772) BO993_20125 PF05598 Transposase domain (DUF772) BO993_20125 PF01609 Transposase DDE domain BO993_20135 PF13340 Putative transposase of IS4/5 family (DUF4096) BO993_20155 PF00037 4Fe-4S binding domain BO993_20170 PF01467 Cytidylyltransferase-like BO993_20180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BO993_20180 PF00183 Hsp90 protein BO993_20220 PF00899 ThiF family BO993_20235 PF05598 Transposase domain (DUF772) BO993_20255 PF00665 Integrase core domain BO993_20255 PF13936 Helix-turn-helix domain BO993_20290 PF00994 Probable molybdopterin binding domain BO993_20290 PF03454 MoeA C-terminal region (domain IV) BO993_20290 PF03453 MoeA N-terminal region (domain I and II) BO993_20295 PF01926 50S ribosome-binding GTPase BO993_20295 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BO993_20300 PF01011 PQQ enzyme repeat BO993_20300 PF13360 PQQ-like domain BO993_20310 PF13464 Domain of unknown function (DUF4115) BO993_20320 PF04055 Radical SAM superfamily BO993_20325 PF00334 Nucleoside diphosphate kinase BO993_20335 PF00378 Enoyl-CoA hydratase/isomerase BO993_20335 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BO993_20335 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BO993_20340 PF02803 Thiolase, C-terminal domain BO993_20340 PF00108 Thiolase, N-terminal domain BO993_20345 PF00654 Voltage gated chloride channel BO993_20355 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BO993_20365 PF12002 MgsA AAA+ ATPase C terminal BO993_20365 PF16193 AAA C-terminal domain BO993_20365 PF00004 ATPase family associated with various cellular activities (AAA) BO993_20375 PF03548 Outer membrane lipoprotein carrier protein LolA BO993_20385 PF09397 Ftsk gamma domain BO993_20385 PF17854 FtsK alpha domain BO993_20385 PF01580 FtsK/SpoIIIE family BO993_20385 PF13491 4TM region of DNA translocase FtsK/SpoIIIE BO993_20390 PF07992 Pyridine nucleotide-disulphide oxidoreductase BO993_20410 PF03588 Leucyl/phenylalanyl-tRNA protein transferase BO993_20415 PF01176 Translation initiation factor 1A / IF-1 BO993_20420 PF02861 Clp amino terminal domain, pathogenicity island component BO993_20420 PF10431 C-terminal, D2-small domain, of ClpB protein BO993_20420 PF00004 ATPase family associated with various cellular activities (AAA) BO993_20420 PF07724 AAA domain (Cdc48 subfamily) BO993_20420 PF17871 AAA lid domain BO993_20425 PF02617 ATP-dependent Clp protease adaptor protein ClpS BO993_20430 PF00293 NUDIX domain BO993_20440 PF04356 Protein of unknown function (DUF489) BO993_20445 PF00672 HAMP domain BO993_20445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BO993_20445 PF12729 Four helix bundle sensory module for signal transduction BO993_20460 PF00563 EAL domain BO993_20460 PF08447 PAS fold BO993_20460 PF08448 PAS fold BO993_20460 PF00990 Diguanylate cyclase, GGDEF domain BO993_20465 PF07730 Histidine kinase BO993_20465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BO993_20470 PF00990 Diguanylate cyclase, GGDEF domain BO993_20470 PF03707 Bacterial signalling protein N terminal repeat BO993_20470 PF00563 EAL domain BO993_20475 PF13188 PAS domain BO993_20475 PF00989 PAS fold BO993_20475 PF00512 His Kinase A (phospho-acceptor) domain BO993_20475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BO993_20475 PF13426 PAS domain BO993_20495 PF01584 CheW-like domain BO993_20495 PF00072 Response regulator receiver domain BO993_20505 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BO993_20505 PF00460 Flagella basal body rod protein BO993_20510 PF03963 Flagellar hook capping protein - N-terminal region BO993_20515 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BO993_20515 PF00460 Flagella basal body rod protein BO993_20515 PF07559 Flagellar basal body protein FlaE BO993_20520 PF00460 Flagella basal body rod protein BO993_20520 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BO993_20525 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BO993_20525 PF00460 Flagella basal body rod protein BO993_20530 PF02107 Flagellar L-ring protein BO993_20535 PF02119 Flagellar P-ring protein BO993_20540 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BO993_20540 PF10135 Rod binding protein BO993_20545 PF07196 Flagellin hook IN motif BO993_20545 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BO993_20555 PF00700 Bacterial flagellin C-terminal helical region BO993_20555 PF00669 Bacterial flagellin N-terminal helical region BO993_20560 PF07195 Flagellar hook-associated protein 2 C-terminus BO993_20560 PF07196 Flagellin hook IN motif BO993_20560 PF02465 Flagellar hook-associated protein 2 N-terminus BO993_20565 PF02561 Flagellar protein FliS BO993_20580 PF00072 Response regulator receiver domain BO993_20580 PF00196 Bacterial regulatory proteins, luxR family BO993_20585 PF04552 Sigma-54, DNA binding domain BO993_20585 PF04963 Sigma-54 factor, core binding domain BO993_20585 PF00309 Sigma-54 factor, Activator interacting domain (AID) BO993_20590 PF00072 Response regulator receiver domain BO993_20590 PF01339 CheB methylesterase BO993_20595 PF02954 Bacterial regulatory protein, Fis family BO993_20595 PF00158 Sigma-54 interaction domain BO993_20595 PF00072 Response regulator receiver domain BO993_20600 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BO993_20610 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BO993_20610 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BO993_20645 PF00535 Glycosyl transferase family 2 BO993_20645 PF00534 Glycosyl transferases group 1 BO993_20650 PF02049 Flagellar hook-basal body complex protein FliE BO993_20655 PF08345 Flagellar M-ring protein C-terminal BO993_20655 PF01514 Secretory protein of YscJ/FliF family BO993_20660 PF01706 FliG C-terminal domain BO993_20660 PF14842 FliG N-terminal domain BO993_20660 PF14841 FliG middle domain BO993_20670 PF18269 T3SS EscN ATPase C-terminal domain BO993_20670 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BO993_20690 PF02154 Flagellar motor switch protein FliM BO993_20690 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BO993_20695 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BO993_20700 PF04347 Flagellar biosynthesis protein, FliO BO993_20705 PF00813 FliP family BO993_20710 PF01313 Bacterial export proteins, family 3 BO993_20715 PF01311 Bacterial export proteins, family 1 BO993_20720 PF00563 EAL domain BO993_20720 PF13188 PAS domain BO993_20720 PF03707 Bacterial signalling protein N terminal repeat BO993_20720 PF00990 Diguanylate cyclase, GGDEF domain BO993_20725 PF00563 EAL domain BO993_20725 PF03707 Bacterial signalling protein N terminal repeat BO993_20725 PF13188 PAS domain BO993_20725 PF00990 Diguanylate cyclase, GGDEF domain BO993_20730 PF00563 EAL domain BO993_20730 PF03707 Bacterial signalling protein N terminal repeat BO993_20730 PF00990 Diguanylate cyclase, GGDEF domain BO993_20735 PF01312 FlhB HrpN YscU SpaS Family BO993_20740 PF00771 FHIPEP family BO993_20745 PF00448 SRP54-type protein, GTPase domain BO993_20750 PF10609 NUBPL iron-transfer P-loop NTPase BO993_20755 PF04542 Sigma-70 region 2 BO993_20755 PF04539 Sigma-70 region 3 BO993_20755 PF04545 Sigma-70, region 4 BO993_20760 PF00072 Response regulator receiver domain BO993_20765 PF04344 Chemotaxis phosphatase, CheZ BO993_20770 PF07194 P2 response regulator binding domain BO993_20770 PF01627 Hpt domain BO993_20770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BO993_20770 PF02895 Signal transducing histidine kinase, homodimeric domain BO993_20770 PF01584 CheW-like domain BO993_20810 PF13340 Putative transposase of IS4/5 family (DUF4096) BO993_20815 PF01609 Transposase DDE domain BO993_20815 PF05598 Transposase domain (DUF772) BO993_20820 PF03527 RHS protein BO993_20820 PF05593 RHS Repeat BO993_20840 PF05598 Transposase domain (DUF772) BO993_20840 PF01609 Transposase DDE domain BO993_20860 PF00873 AcrB/AcrD/AcrF family BO993_20865 PF00873 AcrB/AcrD/AcrF family BO993_20875 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BO993_20880 PF13340 Putative transposase of IS4/5 family (DUF4096) BO993_20900 PF00034 Cytochrome c BO993_20955 PF01609 Transposase DDE domain BO993_20955 PF05598 Transposase domain (DUF772) BO993_20960 PF00005 ABC transporter BO993_20960 PF00664 ABC transporter transmembrane region BO993_20965 PF00005 ABC transporter BO993_20965 PF00664 ABC transporter transmembrane region BO993_20970 PF01654 Cytochrome bd terminal oxidase subunit I BO993_20985 PF01654 Cytochrome bd terminal oxidase subunit I BO993_20990 PF02322 Cytochrome bd terminal oxidase subunit II BO993_21010 PF02129 X-Pro dipeptidyl-peptidase (S15 family) BO993_21010 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain BO993_21015 PF00171 Aldehyde dehydrogenase family BO993_21020 PF01472 PUA domain BO993_21020 PF00696 Amino acid kinase family BO993_21035 PF00206 Lyase BO993_21040 PF01118 Semialdehyde dehydrogenase, NAD binding domain BO993_21050 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase BO993_21050 PF00696 Amino acid kinase family BO993_21055 PF07687 Peptidase dimerisation domain BO993_21055 PF01546 Peptidase family M20/M25/M40 BO993_21065 PF00764 Arginosuccinate synthase BO993_21070 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BO993_21070 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BO993_21080 PF01406 tRNA synthetases class I (C) catalytic domain BO993_21080 PF09190 DALR domain BO993_21085 PF02657 Fe-S metabolism associated domain BO993_21100 PF01258 Prokaryotic dksA/traR C4-type zinc finger BO993_21110 PF01809 Putative membrane protein insertion efficiency factor BO993_21115 PF01979 Amidohydrolase family BO993_21120 PF08460 Bacterial SH3 domain BO993_21120 PF01551 Peptidase family M23 BO993_21125 PF05985 Ethanolamine ammonia-lyase light chain (EutC) BO993_21140 PF01095 Pectinesterase BO993_21155 PF00295 Glycosyl hydrolases family 28 BO993_21165 PF13419 Haloacid dehalogenase-like hydrolase BO993_21175 PF01979 Amidohydrolase family BO993_21185 PF01132 Elongation factor P (EF-P) OB domain BO993_21185 PF09285 Elongation factor P, C-terminal BO993_21185 PF08207 Elongation factor P (EF-P) KOW-like domain BO993_21190 PF04055 Radical SAM superfamily BO993_21195 PF00563 EAL domain BO993_21195 PF00990 Diguanylate cyclase, GGDEF domain BO993_21195 PF13188 PAS domain BO993_21195 PF03707 Bacterial signalling protein N terminal repeat BO993_21205 PF00588 SpoU rRNA Methylase family BO993_21210 PF00459 Inositol monophosphatase family BO993_21215 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BO993_21215 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BO993_21220 PF00545 ribonuclease BO993_21245 PF03880 DbpA RNA binding domain BO993_21245 PF00270 DEAD/DEAH box helicase BO993_21245 PF00271 Helicase conserved C-terminal domain BO993_21250 PF00156 Phosphoribosyl transferase domain BO993_21255 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BO993_21265 PF02798 Glutathione S-transferase, N-terminal domain BO993_21265 PF14497 Glutathione S-transferase, C-terminal domain BO993_21270 PF00313 'Cold-shock' DNA-binding domain BO993_21275 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BO993_21280 PF07152 YaeQ protein BO993_21290 PF00990 Diguanylate cyclase, GGDEF domain BO993_21290 PF00072 Response regulator receiver domain BO993_21290 PF00563 EAL domain BO993_21295 PF01435 Peptidase family M48 BO993_21300 PF00749 tRNA synthetases class I (E and Q), catalytic domain BO993_21305 PF00106 short chain dehydrogenase BO993_21310 PF05233 PHB accumulation regulatory domain BO993_21310 PF07879 PHB/PHA accumulation regulator DNA-binding domain BO993_21325 PF01119 DNA mismatch repair protein, C-terminal domain BO993_21325 PF08676 MutL C terminal dimerisation domain BO993_21330 PF01520 N-acetylmuramoyl-L-alanine amidase BO993_21330 PF11741 AMIN domain BO993_21335 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BO993_21340 PF03853 YjeF-related protein N-terminus BO993_21340 PF01256 Carbohydrate kinase BO993_21345 PF08331 Domain of unknown function (DUF1730) BO993_21350 PF02601 Exonuclease VII, large subunit BO993_21350 PF13742 OB-fold nucleic acid binding domain BO993_21365 PF03781 Sulfatase-modifying factor enzyme 1 BO993_21375 PF00570 HRDC domain BO993_21375 PF01612 3'-5' exonuclease BO993_21415 PF14850 DNA-binding domain of Proline dehydrogenase BO993_21415 PF18327 Proline utilization A proline dehydrogenase N-terminal domain BO993_21415 PF00171 Aldehyde dehydrogenase family BO993_21415 PF01619 Proline dehydrogenase BO993_21420 PF00872 Transposase, Mutator family BO993_21455 PF04386 Stringent starvation protein B BO993_21460 PF02798 Glutathione S-transferase, N-terminal domain BO993_21460 PF00043 Glutathione S-transferase, C-terminal domain BO993_21465 PF02167 Cytochrome C1 family BO993_21470 PF00033 Cytochrome b/b6/petB BO993_21470 PF00032 Cytochrome b(C-terminal)/b6/petD BO993_21475 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal BO993_21475 PF00355 Rieske [2Fe-2S] domain BO993_21480 PF01464 Transglycosylase SLT domain BO993_21505 PF01938 TRAM domain BO993_21505 PF04055 Radical SAM superfamily BO993_21505 PF00919 Uncharacterized protein family UPF0004 BO993_21510 PF02562 PhoH-like protein BO993_21520 PF02130 Uncharacterized protein family UPF0054 BO993_21530 PF00571 CBS domain BO993_21530 PF03471 Transporter associated domain BO993_21545 PF00171 Aldehyde dehydrogenase family BO993_21555 PF00528 Binding-protein-dependent transport system inner membrane component BO993_21570 PF02321 Outer membrane efflux protein BO993_21575 PF07690 Major Facilitator Superfamily BO993_21580 PF13533 Biotin-lipoyl like BO993_21590 PF00120 Glutamine synthetase, catalytic domain BO993_21595 PF07722 Peptidase C26 BO993_21600 PF00120 Glutamine synthetase, catalytic domain BO993_21605 PF01266 FAD dependent oxidoreductase BO993_21610 PF00072 Response regulator receiver domain BO993_21610 PF00990 Diguanylate cyclase, GGDEF domain BO993_21615 PF00083 Sugar (and other) transporter BO993_21615 PF07690 Major Facilitator Superfamily BO993_21625 PF00384 Molybdopterin oxidoreductase BO993_21630 PF02634 FdhD/NarQ family BO993_21635 PF07690 Major Facilitator Superfamily BO993_21645 PF00202 Aminotransferase class-III BO993_21650 PF00005 ABC transporter BO993_21660 PF04286 Protein of unknown function (DUF445) BO993_21665 PF00072 Response regulator receiver domain BO993_21665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BO993_21665 PF00512 His Kinase A (phospho-acceptor) domain BO993_21665 PF01627 Hpt domain BO993_21665 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BO993_21665 PF00672 HAMP domain BO993_21670 PF00072 Response regulator receiver domain BO993_21675 PF01609 Transposase DDE domain BO993_21675 PF05598 Transposase domain (DUF772) BO993_21680 PF01609 Transposase DDE domain BO993_21680 PF05598 Transposase domain (DUF772) BO993_21685 PF05088 Bacterial NAD-glutamate dehydrogenase BO993_21695 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BO993_21695 PF00529 HlyD membrane-fusion protein of T1SS BO993_21700 PF00873 AcrB/AcrD/AcrF family BO993_21715 PF13340 Putative transposase of IS4/5 family (DUF4096) BO993_21725 PF01609 Transposase DDE domain BO993_21725 PF13006 Insertion element 4 transposase N-terminal BO993_21730 PF00356 Bacterial regulatory proteins, lacI family BO993_21735 PF05524 PEP-utilising enzyme, N-terminal BO993_21735 PF00391 PEP-utilising enzyme, mobile domain BO993_21735 PF02896 PEP-utilising enzyme, TIM barrel domain BO993_21735 PF00381 PTS HPr component phosphorylation site BO993_21735 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BO993_21740 PF00294 pfkB family carbohydrate kinase BO993_21745 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BO993_21785 PF02463 RecF/RecN/SMC N terminal domain BO993_21790 PF00145 C-5 cytosine-specific DNA methylase BO993_21845 PF04717 Type VI secretion system, phage-baseplate injector BO993_21845 PF16671 Actin cross-linking domain BO993_21860 PF01527 Transposase BO993_21875 PF13276 HTH-like domain BO993_21875 PF00665 Integrase core domain BO993_21875 PF13333 Integrase core domain BO993_21880 PF01527 Transposase BO993_21885 PF04717 Type VI secretion system, phage-baseplate injector BO993_21885 PF16671 Actin cross-linking domain BO993_21935 PF05598 Transposase domain (DUF772) BO993_21935 PF01609 Transposase DDE domain BO993_21975 PF00593 TonB dependent receptor BO993_21975 PF07715 TonB-dependent Receptor Plug Domain BO993_21985 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BO993_21985 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BO993_22005 PF01618 MotA/TolQ/ExbB proton channel family BO993_22010 PF13677 Membrane MotB of proton-channel complex MotA/MotB BO993_22010 PF00691 OmpA family BO993_22015 PF13614 AAA domain BO993_22020 PF01584 CheW-like domain BO993_22030 PF00072 Response regulator receiver domain BO993_22035 PF01627 Hpt domain BO993_22035 PF09078 CheY binding BO993_22035 PF01584 CheW-like domain BO993_22035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BO993_22035 PF02895 Signal transducing histidine kinase, homodimeric domain BO993_22060 PF00672 HAMP domain BO993_22060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BO993_22060 PF02203 Tar ligand binding domain homologue BO993_22070 PF02203 Tar ligand binding domain homologue BO993_22070 PF00672 HAMP domain BO993_22070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BO993_22080 PF02203 Tar ligand binding domain homologue BO993_22080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BO993_22080 PF00672 HAMP domain BO993_22085 PF02203 Tar ligand binding domain homologue BO993_22085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BO993_22085 PF00672 HAMP domain BO993_22090 PF02203 Tar ligand binding domain homologue BO993_22090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BO993_22090 PF00672 HAMP domain BO993_22095 PF00672 HAMP domain BO993_22095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BO993_22095 PF02203 Tar ligand binding domain homologue BO993_22105 PF07238 PilZ domain BO993_22105 PF07317 Flagellar regulator YcgR BO993_22110 PF01584 CheW-like domain BO993_22120 PF05598 Transposase domain (DUF772) BO993_22120 PF01609 Transposase DDE domain BO993_22140 PF02203 Tar ligand binding domain homologue BO993_22140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BO993_22140 PF00672 HAMP domain BO993_22145 PF03705 CheR methyltransferase, all-alpha domain BO993_22145 PF01739 CheR methyltransferase, SAM binding domain BO993_22150 PF03975 CheD chemotactic sensory transduction BO993_22155 PF01339 CheB methylesterase BO993_22155 PF00072 Response regulator receiver domain BO993_22160 PF03707 Bacterial signalling protein N terminal repeat BO993_22160 PF00990 Diguanylate cyclase, GGDEF domain BO993_22160 PF00563 EAL domain BO993_22170 PF00561 alpha/beta hydrolase fold BO993_22175 PF00330 Aconitase family (aconitate hydratase) BO993_22175 PF06434 Aconitate hydratase 2 N-terminus BO993_22175 PF11791 Aconitate B N-terminal domain BO993_22190 PF00694 Aconitase C-terminal domain BO993_22190 PF00330 Aconitase family (aconitate hydratase) BO993_22200 PF00501 AMP-binding enzyme BO993_22200 PF13193 AMP-binding enzyme C-terminal domain BO993_22205 PF00378 Enoyl-CoA hydratase/isomerase BO993_22210 PF01627 Hpt domain BO993_22210 PF00512 His Kinase A (phospho-acceptor) domain BO993_22210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BO993_22210 PF00072 Response regulator receiver domain BO993_22220 PF00072 Response regulator receiver domain BO993_22225 PF00152 tRNA synthetases class II (D, K and N) BO993_22225 PF01336 OB-fold nucleic acid binding domain BO993_22230 PF03462 PCRF domain BO993_22230 PF00472 RF-1 domain BO993_22245 PF01610 Transposase BO993_22245 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 BO993_22245 PF13542 Helix-turn-helix domain of transposase family ISL3 BO993_22265 PF01368 DHH family BO993_22265 PF02272 DHHA1 domain BO993_22265 PF17768 RecJ OB domain BO993_22275 PF03449 Transcription elongation factor, N-terminal BO993_22275 PF01272 Transcription elongation factor, GreA/GreB, C-term BO993_22280 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BO993_22280 PF02142 MGS-like domain BO993_22280 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BO993_22290 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BO993_22290 PF00117 Glutamine amidotransferase class-I BO993_22295 PF01113 Dihydrodipicolinate reductase, N-terminus BO993_22295 PF05173 Dihydrodipicolinate reductase, C-terminus BO993_22305 PF13340 Putative transposase of IS4/5 family (DUF4096) BO993_22310 PF03473 MOSC domain BO993_22310 PF03475 3-alpha domain BO993_22315 PF00155 Aminotransferase class I and II BO993_22335 PF07664 Ferrous iron transport protein B C terminus BO993_22335 PF02421 Ferrous iron transport protein B BO993_22335 PF07670 Nucleoside recognition BO993_22345 PF00378 Enoyl-CoA hydratase/isomerase BO993_22355 PF00682 HMGL-like BO993_22360 PF00106 short chain dehydrogenase BO993_22365 PF01132 Elongation factor P (EF-P) OB domain BO993_22365 PF08207 Elongation factor P (EF-P) KOW-like domain BO993_22365 PF09285 Elongation factor P, C-terminal BO993_22385 PF00083 Sugar (and other) transporter BO993_22395 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BO993_22395 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BO993_22410 PF01055 Glycosyl hydrolases family 31 BO993_22410 PF17137 Domain of unknown function (DUF5110) BO993_22410 PF16338 Domain of unknown function (DUF4968) BO993_22420 PF03466 LysR substrate binding domain BO993_22420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BO993_22425 PF01081 KDPG and KHG aldolase BO993_22430 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BO993_22430 PF13378 Enolase C-terminal domain-like BO993_22435 PF08450 SMP-30/Gluconolactonase/LRE-like region BO993_22440 PF05035 2-keto-3-deoxy-galactonokinase BO993_22445 PF00037 4Fe-4S binding domain BO993_22445 PF11953 Domain of unknown function (DUF3470) BO993_22455 PF00701 Dihydrodipicolinate synthetase family BO993_22475 PF00578 AhpC/TSA family BO993_22480 PF02562 PhoH-like protein BO993_22480 PF13638 PIN domain BO993_22490 PF08543 Phosphomethylpyrimidine kinase BO993_22520 PF03466 LysR substrate binding domain BO993_22520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BO993_22525 PF17954 Quercetinase C-terminal cupin domain BO993_22525 PF02678 Pirin BO993_22555 PF03796 DnaB-like helicase C terminal domain BO993_22555 PF00772 DnaB-like helicase N terminal domain BO993_22575 PF02599 Global regulator protein family BO993_22580 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BO993_22580 PF01411 tRNA synthetases class II (A) BO993_22580 PF02272 DHHA1 domain BO993_22585 PF02631 RecX family BO993_22590 PF00154 recA bacterial DNA recombination protein BO993_22595 PF00717 Peptidase S24-like BO993_22595 PF01726 LexA DNA binding domain BO993_22600 PF03109 ABC1 family BO993_22605 PF02464 Competence-damaged protein BO993_22610 PF13167 GTP-binding GTPase N-terminal BO993_22610 PF16360 GTP-binding GTPase Middle Region BO993_22610 PF01926 50S ribosome-binding GTPase BO993_22615 PF17209 Hfq protein BO993_22625 PF00809 Pterin binding enzyme BO993_22630 PF00004 ATPase family associated with various cellular activities (AAA) BO993_22630 PF06480 FtsH Extracellular BO993_22630 PF17862 AAA+ lid domain BO993_22630 PF01434 Peptidase family M41 BO993_22635 PF01728 FtsJ-like methyltransferase BO993_22640 PF01985 CRS1 / YhbY (CRM) domain BO993_22650 PF01551 Peptidase family M23 BO993_22650 PF01476 LysM domain BO993_22655 PF09335 SNARE associated Golgi protein BO993_22665 PF01975 Survival protein SurE BO993_22670 PF01713 Smr domain BO993_22675 PF01142 tRNA pseudouridine synthase D (TruD) BO993_22680 PF02542 YgbB family BO993_22690 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BO993_22695 PF04977 Septum formation initiator BO993_22700 PF00113 Enolase, C-terminal TIM barrel domain BO993_22700 PF03952 Enolase, N-terminal domain BO993_22710 PF00793 DAHP synthetase I family BO993_22715 PF06418 CTP synthase N-terminus BO993_22715 PF00117 Glutamine amidotransferase class-I BO993_22725 PF01751 Toprim domain BO993_22725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BO993_22725 PF00204 DNA gyrase B BO993_22725 PF00986 DNA gyrase B subunit, carboxyl terminus BO993_22745 PF01384 Phosphate transporter family BO993_22755 PF03471 Transporter associated domain BO993_22755 PF01595 Cyclin M transmembrane N-terminal domain BO993_22755 PF00571 CBS domain BO993_22770 PF00296 Luciferase-like monooxygenase BO993_22780 PF07690 Major Facilitator Superfamily BO993_22790 PF00664 ABC transporter transmembrane region BO993_22790 PF00005 ABC transporter BO993_22795 PF00005 ABC transporter BO993_22810 PF13579 Glycosyl transferase 4-like domain BO993_22810 PF00534 Glycosyl transferases group 1 BO993_22830 PF08241 Methyltransferase domain BO993_22845 PF00535 Glycosyl transferase family 2 BO993_22850 PF01943 Polysaccharide biosynthesis protein BO993_22855 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BO993_22875 PF05523 WxcM-like, C-terminal BO993_22890 PF00034 Cytochrome c BO993_22900 PF04542 Sigma-70 region 2 BO993_22900 PF08281 Sigma-70, region 4 BO993_22910 PF00082 Subtilase family BO993_22915 PF01578 Cytochrome C assembly protein BO993_22920 PF04995 Heme exporter protein D (CcmD) BO993_22925 PF03100 CcmE BO993_22930 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal BO993_22930 PF01578 Cytochrome C assembly protein BO993_22935 PF08534 Redoxin BO993_22940 PF03918 Cytochrome C biogenesis protein BO993_22965 PF03377 TAL effector repeat BO993_22995 PF00873 AcrB/AcrD/AcrF family BO993_23005 PF00873 AcrB/AcrD/AcrF family BO993_23010 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BO993_23010 PF00529 HlyD membrane-fusion protein of T1SS BO993_23045 PF01527 Transposase BO993_23050 PF13276 HTH-like domain BO993_23060 PF13700 Domain of unknown function (DUF4158) BO993_23060 PF01526 Tn3 transposase DDE domain BO993_23065 PF00072 Response regulator receiver domain BO993_23065 PF00486 Transcriptional regulatory protein, C terminal BO993_23070 PF00034 Cytochrome c BO993_23070 PF03150 Di-haem cytochrome c peroxidase BO993_23075 PF00512 His Kinase A (phospho-acceptor) domain BO993_23075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BO993_23080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BO993_23080 PF03466 LysR substrate binding domain BO993_23100 PF00069 Protein kinase domain BO993_23140 PF04717 Type VI secretion system, phage-baseplate injector BO993_23140 PF16671 Actin cross-linking domain BO993_23150 PF01609 Transposase DDE domain BO993_23150 PF05598 Transposase domain (DUF772) BO993_23160 PF17871 AAA lid domain BO993_23160 PF10431 C-terminal, D2-small domain, of ClpB protein BO993_23160 PF07724 AAA domain (Cdc48 subfamily) BO993_23160 PF00004 ATPase family associated with various cellular activities (AAA) BO993_23185 PF05638 Type VI secretion system effector, Hcp BO993_23215 PF01609 Transposase DDE domain BO993_23215 PF05598 Transposase domain (DUF772) BO993_23245 PF13683 Integrase core domain BO993_23245 PF13276 HTH-like domain BO993_23255 PF01106 NifU-like domain BO993_23260 PF01329 Pterin 4 alpha carbinolamine dehydratase BO993_23270 PF02535 ZIP Zinc transporter BO993_23275 PF02535 ZIP Zinc transporter BO993_23280 PF11737 Protein of unknown function (DUF3300) BO993_23285 PF00849 RNA pseudouridylate synthase BO993_23285 PF01479 S4 domain BO993_23290 PF12111 Polyribonucleotide phosphorylase C terminal BO993_23290 PF00575 S1 RNA binding domain BO993_23290 PF10150 Ribonuclease E/G family BO993_23300 PF13340 Putative transposase of IS4/5 family (DUF4096) BO993_23305 PF00072 Response regulator receiver domain BO993_23305 PF00196 Bacterial regulatory proteins, luxR family BO993_23320 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BO993_23330 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BO993_23330 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BO993_23330 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BO993_23340 PF17837 4'-phosphopantetheinyl transferase N-terminal domain BO993_23340 PF01648 4'-phosphopantetheinyl transferase superfamily BO993_23360 PF13340 Putative transposase of IS4/5 family (DUF4096) BO993_23415 PF03861 ANTAR domain BO993_23415 PF00072 Response regulator receiver domain BO993_23425 PF10414 Sirohaem synthase dimerisation region BO993_23425 PF14824 Sirohaem biosynthesis protein central BO993_23425 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BO993_23450 PF12804 MobA-like NTP transferase domain BO993_23455 PF03454 MoeA C-terminal region (domain IV) BO993_23455 PF00994 Probable molybdopterin binding domain BO993_23455 PF03453 MoeA N-terminal region (domain I and II) BO993_23500 PF00872 Transposase, Mutator family BO993_23505 PF00593 TonB dependent receptor BO993_23505 PF07715 TonB-dependent Receptor Plug Domain BO993_23515 PF04616 Glycosyl hydrolases family 43 BO993_23520 PF07532 Bacterial Ig-like domain (group 4) BO993_23525 PF00593 TonB dependent receptor BO993_23525 PF07715 TonB-dependent Receptor Plug Domain BO993_23535 PF00082 Subtilase family BO993_23535 PF09286 Pro-kumamolisin, activation domain BO993_23575 PF13520 Amino acid permease BO993_23590 PF01321 Creatinase/Prolidase N-terminal domain BO993_23590 PF00557 Metallopeptidase family M24 BO993_23595 PF00171 Aldehyde dehydrogenase family BO993_23600 PF00701 Dihydrodipicolinate synthetase family BO993_23605 PF04324 BFD-like [2Fe-2S] binding domain BO993_23605 PF07992 Pyridine nucleotide-disulphide oxidoreductase BO993_23615 PF01266 FAD dependent oxidoreductase BO993_23620 PF05544 Proline racemase BO993_23630 PF02881 SRP54-type protein, helical bundle domain BO993_23630 PF00448 SRP54-type protein, GTPase domain BO993_23645 PF00730 HhH-GPD superfamily base excision DNA repair protein BO993_23645 PF00633 Helix-hairpin-helix motif BO993_23645 PF14815 NUDIX domain BO993_23650 PF04362 Bacterial Fe(2+) trafficking BO993_23655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BO993_23655 PF00072 Response regulator receiver domain BO993_23655 PF13426 PAS domain BO993_23670 PF05598 Transposase domain (DUF772) BO993_23775 PF03808 Glycosyl transferase WecB/TagA/CpsF family BO993_23790 PF14667 Polysaccharide biosynthesis C-terminal domain BO993_23800 PF13439 Glycosyltransferase Family 4 BO993_23800 PF00534 Glycosyl transferases group 1 BO993_23820 PF02397 Bacterial sugar transferase BO993_23840 PF13411 MerR HTH family regulatory protein BO993_23845 PF00216 Bacterial DNA-binding protein BO993_23850 PF03483 B3/4 domain BO993_23850 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BO993_23850 PF01588 Putative tRNA binding domain BO993_23850 PF03147 Ferredoxin-fold anticodon binding domain BO993_23850 PF03484 tRNA synthetase B5 domain BO993_23855 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BO993_23855 PF01409 tRNA synthetases class II core domain (F) BO993_23860 PF00453 Ribosomal protein L20 BO993_23865 PF01632 Ribosomal protein L35 BO993_23870 PF05198 Translation initiation factor IF-3, N-terminal domain BO993_23870 PF00707 Translation initiation factor IF-3, C-terminal domain BO993_23875 PF03129 Anticodon binding domain BO993_23875 PF02824 TGS domain BO993_23875 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BO993_23875 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BO993_23885 PF01527 Transposase BO993_23910 PF12344 Ultra-violet resistance protein B BO993_23910 PF00271 Helicase conserved C-terminal domain BO993_23910 PF17757 UvrB interaction domain BO993_23910 PF02151 UvrB/uvrC motif BO993_23910 PF04851 Type III restriction enzyme, res subunit BO993_23915 PF00114 Pilin (bacterial filament) BO993_23915 PF07963 Prokaryotic N-terminal methylation motif BO993_23965 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BO993_23970 PF11657 Transcriptional activator TraM BO993_24000 PF08535 KorB domain BO993_24000 PF06613 KorB C-terminal beta-barrel domain BO993_24000 PF02195 ParB-like nuclease domain BO993_24005 PF13614 AAA domain BO993_24010 PF16509 TrfB plasmid transcriptional repressor BO993_24015 PF17394 Uncharacterized KleE stable inheritance protein BO993_24025 PF03230 Antirestriction protein BO993_24040 PF07042 TrfA protein BO993_24045 PF00436 Single-strand binding protein family BO993_24055 PF00437 Type II/IV secretion system protein BO993_24070 PF03135 CagE, TrbE, VirB family, component of type IV transporter system BO993_24080 PF03524 Conjugal transfer protein BO993_24090 PF03743 Bacterial conjugation TrbI-like protein BO993_24125 PF00239 Resolvase, N terminal domain BO993_24125 PF02796 Helix-turn-helix domain of resolvase BO993_24135 PF08401 Domain of unknown function (DUF1738) BO993_24135 PF18818 Metallopeptidase superfamily domain BO993_24135 PF13362 Toprim domain BO993_24145 PF01751 Toprim domain BO993_24145 PF01131 DNA topoisomerase BO993_24150 PF10502 Signal peptidase, peptidase S26 BO993_24155 PF02534 Type IV secretory system Conjugative DNA transfer