locus-tag class description NO935_00005 PF00308 Bacterial dnaA protein NO935_00005 PF08299 Bacterial dnaA protein helix-turn-helix NO935_00005 PF11638 DnaA N-terminal domain NO935_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain NO935_00010 PF02767 DNA polymerase III beta subunit, central domain NO935_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain NO935_00015 PF02463 RecF/RecN/SMC N terminal domain NO935_00020 PF00204 DNA gyrase B NO935_00020 PF00986 DNA gyrase B subunit, carboxyl terminus NO935_00020 PF18053 DNA gyrase B subunit insert domain NO935_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NO935_00020 PF01751 Toprim domain NO935_00030 PF01435 Peptidase family M48 NO935_00040 PF03544 Gram-negative bacterial TonB protein C-terminal NO935_00045 PF01618 MotA/TolQ/ExbB proton channel family NO935_00050 PF02472 Biopolymer transport protein ExbD/TolR NO935_00055 PF02472 Biopolymer transport protein ExbD/TolR NO935_00060 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ NO935_00070 PF13091 PLD-like domain NO935_00070 PF13396 Phospholipase_D-nuclease N-terminal NO935_00080 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain NO935_00085 PF00155 Aminotransferase class I and II NO935_00090 PF07715 TonB-dependent Receptor Plug Domain NO935_00090 PF00593 TonB dependent receptor NO935_00105 PF05598 Transposase domain (DUF772) NO935_00105 PF01609 Transposase DDE domain NO935_00110 PF01070 FMN-dependent dehydrogenase NO935_00130 PF07055 Enoyl reductase FAD binding domain NO935_00130 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase NO935_00130 PF12241 Trans-2-enoyl-CoA reductase catalytic region NO935_00140 PF00294 pfkB family carbohydrate kinase NO935_00215 PF13344 Haloacid dehalogenase-like hydrolase NO935_00215 PF00293 NUDIX domain NO935_00235 PF13936 Helix-turn-helix domain NO935_00235 PF00665 Integrase core domain NO935_00260 PF05598 Transposase domain (DUF772) NO935_00260 PF01609 Transposase DDE domain NO935_00270 PF08338 Domain of unknown function (DUF1731) NO935_00270 PF01370 NAD dependent epimerase/dehydratase family NO935_00290 PF00595 PDZ domain NO935_00325 PF05819 NolX protein NO935_00375 PF01313 Bacterial export proteins, family 3 NO935_00380 PF00813 FliP family NO935_00395 PF00771 FHIPEP family NO935_00400 PF01312 FlhB HrpN YscU SpaS Family NO935_00415 PF01514 Secretory protein of YscJ/FliF family NO935_00430 PF02874 ATP synthase alpha/beta family, beta-barrel domain NO935_00430 PF18269 T3SS EscN ATPase C-terminal domain NO935_00430 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NO935_00440 PF01311 Bacterial export proteins, family 1 NO935_00445 PF00263 Bacterial type II and III secretion system protein NO935_00445 PF03958 Bacterial type II/III secretion system short domain NO935_00460 PF01464 Transglycosylase SLT domain NO935_00480 PF00924 Mechanosensitive ion channel NO935_00480 PF12795 Mechanosensitive ion channel porin domain NO935_00480 PF12794 Mechanosensitive ion channel inner membrane domain 1 NO935_00495 PF03109 ABC1 family NO935_00500 PF05661 Protein of unknown function (DUF808) NO935_00505 PF02638 Glycosyl hydrolase-like 10 NO935_00510 PF00990 Diguanylate cyclase, GGDEF domain NO935_00515 PF08323 Starch synthase catalytic domain NO935_00515 PF00534 Glycosyl transferases group 1 NO935_00520 PF00128 Alpha amylase, catalytic domain NO935_00520 PF02806 Alpha amylase, C-terminal all-beta domain NO935_00520 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NO935_00525 PF00128 Alpha amylase, catalytic domain NO935_00525 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NO935_00525 PF11941 Domain of unknown function (DUF3459) NO935_00530 PF02446 4-alpha-glucanotransferase NO935_00535 PF00128 Alpha amylase, catalytic domain NO935_00545 PF00128 Alpha amylase, catalytic domain NO935_00545 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NO935_00550 PF13460 NAD(P)H-binding NO935_00565 PF03150 Di-haem cytochrome c peroxidase NO935_00625 PF06903 VirK protein NO935_00635 PF00271 Helicase conserved C-terminal domain NO935_00635 PF00270 DEAD/DEAH box helicase NO935_00640 PF01609 Transposase DDE domain NO935_00640 PF05598 Transposase domain (DUF772) NO935_00685 PF00005 ABC transporter NO935_00710 PF01609 Transposase DDE domain NO935_00710 PF05598 Transposase domain (DUF772) NO935_00715 PF13533 Biotin-lipoyl like NO935_00725 PF00005 ABC transporter NO935_00750 PF08845 Toxin SymE, type I toxin-antitoxin system NO935_00765 PF03006 Haemolysin-III related NO935_00770 PF00271 Helicase conserved C-terminal domain NO935_00770 PF09369 Domain of unknown function (DUF1998) NO935_00770 PF00270 DEAD/DEAH box helicase NO935_00830 PF01645 Conserved region in glutamate synthase NO935_00830 PF01493 GXGXG motif NO935_00830 PF00310 Glutamine amidotransferases class-II NO935_00830 PF04898 Glutamate synthase central domain NO935_00835 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NO935_00835 PF07992 Pyridine nucleotide-disulphide oxidoreductase NO935_00875 PF05598 Transposase domain (DUF772) NO935_00885 PF00356 Bacterial regulatory proteins, lacI family NO935_00905 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NO935_00905 PF02806 Alpha amylase, C-terminal all-beta domain NO935_00905 PF00128 Alpha amylase, catalytic domain NO935_00910 PF16657 Maltogenic Amylase, C-terminal domain NO935_00910 PF00128 Alpha amylase, catalytic domain NO935_00915 PF11896 Domain of unknown function (DUF3416) NO935_00915 PF00128 Alpha amylase, catalytic domain NO935_00960 PF13335 Magnesium chelatase, subunit ChlI C-terminal NO935_00960 PF01078 Magnesium chelatase, subunit ChlI NO935_00965 PF04380 Membrane fusogenic activity NO935_00970 PF00543 Nitrogen regulatory protein P-II NO935_01005 PF17284 Spermidine synthase tetramerisation domain NO935_01010 PF17810 Arginine decarboxylase helical bundle domain NO935_01010 PF17944 Arginine decarboxylase C-terminal helical extension NO935_01010 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NO935_01020 PF13296 Putative type VI secretion system Rhs element Vgr NO935_01020 PF04717 Type VI secretion system, phage-baseplate injector NO935_01020 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) NO935_01060 PF01134 Glucose inhibited division protein A NO935_01060 PF13932 GidA associated domain NO935_01075 PF00291 Pyridoxal-phosphate dependent enzyme NO935_01095 PF13649 Methyltransferase domain NO935_01105 PF12697 Alpha/beta hydrolase family NO935_01125 PF04349 Periplasmic glucan biosynthesis protein, MdoG NO935_01135 PF00265 Thymidine kinase NO935_01140 PF00580 UvrD/REP helicase N-terminal domain NO935_01140 PF13361 UvrD-like helicase C-terminal domain NO935_01155 PF04337 Protein of unknown function, DUF480 NO935_01160 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) NO935_01165 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NO935_01170 PF04820 Tryptophan halogenase NO935_01185 PF00356 Bacterial regulatory proteins, lacI family NO935_01200 PF01553 Acyltransferase NO935_01205 PF08659 KR domain NO935_01205 PF00550 Phosphopantetheine attachment site NO935_01205 PF14765 Polyketide synthase dehydratase NO935_01205 PF00109 Beta-ketoacyl synthase, N-terminal domain NO935_01205 PF16197 Ketoacyl-synthetase C-terminal extension NO935_01205 PF08240 Alcohol dehydrogenase GroES-like domain NO935_01205 PF00698 Acyl transferase domain NO935_01205 PF02801 Beta-ketoacyl synthase, C-terminal domain NO935_01240 PF01734 Patatin-like phospholipase NO935_01250 PF00005 ABC transporter NO935_01265 PF00005 ABC transporter NO935_01265 PF00571 CBS domain NO935_01270 PF00528 Binding-protein-dependent transport system inner membrane component NO935_01280 PF03781 Sulfatase-modifying factor enzyme 1 NO935_01280 PF12867 DinB superfamily NO935_01285 PF10017 Histidine-specific methyltransferase, SAM-dependent NO935_01290 PF07804 HipA-like C-terminal domain NO935_01290 PF13657 HipA N-terminal domain NO935_01295 PF01381 Helix-turn-helix NO935_01315 PF10609 NUBPL iron-transfer P-loop NTPase NO935_01315 PF01883 Iron-sulfur cluster assembly protein NO935_01330 PF13091 PLD-like domain NO935_01335 PF03061 Thioesterase superfamily NO935_01370 PF02673 Bacitracin resistance protein BacA NO935_01375 PF03951 Glutamine synthetase, beta-Grasp domain NO935_01375 PF00120 Glutamine synthetase, catalytic domain NO935_01380 PF00543 Nitrogen regulatory protein P-II NO935_01385 PF00909 Ammonium Transporter Family NO935_01390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NO935_01390 PF00512 His Kinase A (phospho-acceptor) domain NO935_01390 PF00989 PAS fold NO935_01395 PF00072 Response regulator receiver domain NO935_01395 PF00158 Sigma-54 interaction domain NO935_01395 PF02954 Bacterial regulatory protein, Fis family NO935_01400 PF00080 Copper/zinc superoxide dismutase (SODC) NO935_01410 PF00080 Copper/zinc superoxide dismutase (SODC) NO935_01450 PF02463 RecF/RecN/SMC N terminal domain NO935_01450 PF06470 SMC proteins Flexible Hinge Domain NO935_01460 PF17946 RecC C-terminal domain NO935_01465 PF00580 UvrD/REP helicase N-terminal domain NO935_01465 PF13361 UvrD-like helicase C-terminal domain NO935_01465 PF12705 PD-(D/E)XK nuclease superfamily NO935_01470 PF13538 UvrD-like helicase C-terminal domain NO935_01475 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB NO935_01480 PF01381 Helix-turn-helix NO935_01560 PF02566 OsmC-like protein NO935_01565 PF01047 MarR family NO935_01595 PF00440 Bacterial regulatory proteins, tetR family NO935_01600 PF00175 Oxidoreductase NAD-binding domain NO935_01600 PF00111 2Fe-2S iron-sulfur cluster binding domain NO935_01600 PF00970 Oxidoreductase FAD-binding domain NO935_01605 PF00487 Fatty acid desaturase NO935_01650 PF04616 Glycosyl hydrolases family 43 NO935_01680 PF00553 Cellulose binding domain NO935_01680 PF00331 Glycosyl hydrolase family 10 NO935_01680 PF03422 Carbohydrate binding module (family 6) NO935_01685 PF02614 Glucuronate isomerase NO935_01705 PF01232 Mannitol dehydrogenase Rossmann domain NO935_01705 PF08125 Mannitol dehydrogenase C-terminal domain NO935_01710 PF14310 Fibronectin type III-like domain NO935_01710 PF01915 Glycosyl hydrolase family 3 C-terminal domain NO935_01710 PF07691 PA14 domain NO935_01710 PF00933 Glycosyl hydrolase family 3 N terminal domain NO935_01715 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain NO935_01715 PF04616 Glycosyl hydrolases family 43 NO935_01720 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NO935_01720 PF13378 Enolase C-terminal domain-like NO935_01730 PF07477 Glycosyl hydrolase family 67 C-terminus NO935_01730 PF07488 Glycosyl hydrolase family 67 middle domain NO935_01730 PF03648 Glycosyl hydrolase family 67 N-terminus NO935_01740 PF00356 Bacterial regulatory proteins, lacI family NO935_01750 PF01171 PP-loop family NO935_01755 PF04381 Putative exonuclease, RdgC NO935_01780 PF00762 Ferrochelatase NO935_01790 PF02416 mttA/Hcf106 family NO935_01795 PF02416 mttA/Hcf106 family NO935_01800 PF00902 Sec-independent protein translocase protein (TatC) NO935_01810 PF00958 GMP synthase C terminal domain NO935_01810 PF00117 Glutamine amidotransferase class-I NO935_01825 PF00437 Type II/IV secretion system protein NO935_01825 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NO935_01830 PF02091 Glycyl-tRNA synthetase alpha subunit NO935_01835 PF05746 DALR anticodon binding domain NO935_01835 PF02092 Glycyl-tRNA synthetase beta subunit NO935_01840 PF13181 Tetratricopeptide repeat NO935_01845 PF07715 TonB-dependent Receptor Plug Domain NO935_01845 PF00593 TonB dependent receptor NO935_01865 PF00664 ABC transporter transmembrane region NO935_01865 PF00005 ABC transporter NO935_01865 PF03412 Peptidase C39 family NO935_01875 PF03969 AFG1-like ATPase NO935_01895 PF07683 Cobalamin synthesis protein cobW C-terminal domain NO935_01895 PF02492 CobW/HypB/UreG, nucleotide-binding domain NO935_01955 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NO935_01955 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NO935_01955 PF02770 Acyl-CoA dehydrogenase, middle domain NO935_01960 PF01039 Carboxyl transferase domain NO935_01965 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NO935_01965 PF02785 Biotin carboxylase C-terminal domain NO935_01965 PF00289 Biotin carboxylase, N-terminal domain NO935_01965 PF00364 Biotin-requiring enzyme NO935_01965 PF18140 Propionyl-coenzyme A carboxylase BT domain NO935_01970 PF00326 Prolyl oligopeptidase family NO935_02025 PF00576 HIUase/Transthyretin family NO935_02050 PF00266 Aminotransferase class-V NO935_02095 PF01026 TatD related DNase NO935_02115 PF07690 Major Facilitator Superfamily NO935_02125 PF02146 Sir2 family NO935_02130 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NO935_02135 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NO935_02135 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NO935_02155 PF00551 Formyl transferase NO935_02160 PF00072 Response regulator receiver domain NO935_02160 PF00486 Transcriptional regulatory protein, C terminal NO935_02180 PF02677 Epoxyqueuosine reductase QueH NO935_02185 PF03466 LysR substrate binding domain NO935_02185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NO935_02190 PF03358 NADPH-dependent FMN reductase NO935_02200 PF08267 Cobalamin-independent synthase, N-terminal domain NO935_02200 PF01717 Cobalamin-independent synthase, Catalytic domain NO935_02205 PF03812 2-keto-3-deoxygluconate permease NO935_02215 PF05368 NmrA-like family NO935_02220 PF01638 HxlR-like helix-turn-helix NO935_02265 PF04820 Tryptophan halogenase NO935_02270 PF00550 Phosphopantetheine attachment site NO935_02280 PF01553 Acyltransferase NO935_02320 PF04357 TamB, inner membrane protein subunit of TAM complex NO935_02325 PF01103 Surface antigen NO935_02325 PF17243 POTRA domain TamA domain 1 NO935_02340 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NO935_02340 PF07498 Rho termination factor, N-terminal domain NO935_02340 PF07497 Rho termination factor, RNA-binding domain NO935_02345 PF00085 Thioredoxin NO935_02350 PF00270 DEAD/DEAH box helicase NO935_02350 PF00271 Helicase conserved C-terminal domain NO935_02350 PF12300 ATP-dependent RNA helicase RhlB NO935_02355 PF00005 ABC transporter NO935_02360 PF18075 FtsX extracellular domain NO935_02365 PF01339 CheB methylesterase NO935_02365 PF00072 Response regulator receiver domain NO935_02370 PF03167 Uracil DNA glycosylase superfamily NO935_02375 PF04542 Sigma-70 region 2 NO935_02375 PF04545 Sigma-70, region 4 NO935_02385 PF07992 Pyridine nucleotide-disulphide oxidoreductase NO935_02405 PF00166 Chaperonin 10 Kd subunit NO935_02410 PF00118 TCP-1/cpn60 chaperonin family NO935_02430 PF00793 DAHP synthetase I family NO935_02460 PF08450 SMP-30/Gluconolactonase/LRE-like region NO935_02470 PF08335 GlnD PII-uridylyltransferase NO935_02470 PF03710 Glutamate-ammonia ligase adenylyltransferase NO935_02475 PF02592 Putative vitamin uptake transporter NO935_02500 PF00881 Nitroreductase family NO935_02505 PF04264 YceI-like domain NO935_02545 PF03377 TAL effector repeat NO935_02565 PF00456 Transketolase, thiamine diphosphate binding domain NO935_02565 PF17831 Pyruvate dehydrogenase E1 component middle domain NO935_02590 PF01367 5'-3' exonuclease, C-terminal SAM fold NO935_02590 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NO935_02590 PF00476 DNA polymerase family A NO935_02590 PF01612 3'-5' exonuclease NO935_02595 PF01218 Coproporphyrinogen III oxidase NO935_02625 PF13495 Phage integrase, N-terminal SAM-like domain NO935_02625 PF00589 Phage integrase family NO935_02630 PF00920 Dehydratase family NO935_02635 PF03692 Putative zinc- or iron-chelating domain NO935_02640 PF00132 Bacterial transferase hexapeptide (six repeats) NO935_02645 PF07690 Major Facilitator Superfamily NO935_02650 PF01966 HD domain NO935_02650 PF11871 Domain of unknown function (DUF3391) NO935_02660 PF05598 Transposase domain (DUF772) NO935_02670 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family NO935_02675 PF00501 AMP-binding enzyme NO935_02680 PF03692 Putative zinc- or iron-chelating domain NO935_02685 PF00561 alpha/beta hydrolase fold NO935_02710 PF13784 Fic/DOC family N-terminal NO935_02710 PF02661 Fic/DOC family NO935_02715 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NO935_02715 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NO935_02730 PF00588 SpoU rRNA Methylase family NO935_02735 PF07690 Major Facilitator Superfamily NO935_02750 PF02954 Bacterial regulatory protein, Fis family NO935_02750 PF00072 Response regulator receiver domain NO935_02750 PF00158 Sigma-54 interaction domain NO935_02755 PF00512 His Kinase A (phospho-acceptor) domain NO935_02755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NO935_02760 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NO935_02760 PF00205 Thiamine pyrophosphate enzyme, central domain NO935_02760 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NO935_02770 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NO935_02770 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NO935_02775 PF02556 Preprotein translocase subunit SecB NO935_02780 PF00581 Rhodanese-like domain NO935_02815 PF07063 Domain of unknown function (DUF1338) NO935_02820 PF00873 AcrB/AcrD/AcrF family NO935_02825 PF00873 AcrB/AcrD/AcrF family NO935_02830 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NO935_02835 PF01546 Peptidase family M20/M25/M40 NO935_02835 PF07687 Peptidase dimerisation domain NO935_02845 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term NO935_02845 PF14489 QueF-like protein NO935_02875 PF05598 Transposase domain (DUF772) NO935_02885 PF03971 Monomeric isocitrate dehydrogenase NO935_02910 PF00117 Glutamine amidotransferase class-I NO935_02920 PF02885 Glycosyl transferase family, helical bundle domain NO935_02920 PF00591 Glycosyl transferase family, a/b domain NO935_02925 PF00218 Indole-3-glycerol phosphate synthase NO935_02935 PF00325 Bacterial regulatory proteins, crp family NO935_02935 PF00027 Cyclic nucleotide-binding domain NO935_02940 PF02675 S-adenosylmethionine decarboxylase NO935_02945 PF00893 Small Multidrug Resistance protein NO935_02950 PF03232 Ubiquinone biosynthesis protein COQ7 NO935_02955 PF00572 Ribosomal protein L13 NO935_02960 PF00380 Ribosomal protein S9/S16 NO935_02975 PF00293 NUDIX domain NO935_02985 PF00210 Ferritin-like domain NO935_03000 PF18327 Proline utilization A proline dehydrogenase N-terminal domain NO935_03000 PF00171 Aldehyde dehydrogenase family NO935_03000 PF14850 DNA-binding domain of Proline dehydrogenase NO935_03000 PF01619 Proline dehydrogenase NO935_03010 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NO935_03010 PF02790 Cytochrome C oxidase subunit II, transmembrane domain NO935_03015 PF00115 Cytochrome C and Quinol oxidase polypeptide I NO935_03025 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 NO935_03030 PF00510 Cytochrome c oxidase subunit III NO935_03055 PF01040 UbiA prenyltransferase family NO935_03070 PF13593 SBF-like CPA transporter family (DUF4137) NO935_03090 PF01609 Transposase DDE domain NO935_03090 PF05598 Transposase domain (DUF772) NO935_03115 PF18319 PriA DNA helicase Cys-rich region (CRR) domain NO935_03115 PF17764 3′ DNA-binding domain (3′BD) NO935_03115 PF00271 Helicase conserved C-terminal domain NO935_03115 PF00270 DEAD/DEAH box helicase NO935_03115 PF18074 Primosomal protein N C-terminal domain NO935_03135 PF01554 MatE NO935_03140 PF01343 Peptidase family S49 NO935_03170 PF01300 Telomere recombination NO935_03175 PF01751 Toprim domain NO935_03175 PF01131 DNA topoisomerase NO935_03175 PF13368 Topoisomerase C-terminal repeat NO935_03185 PF00114 Pilin (bacterial filament) NO935_03185 PF07963 Prokaryotic N-terminal methylation motif NO935_03190 PF04361 Protein of unknown function (DUF494) NO935_03195 PF02481 DNA recombination-mediator protein A NO935_03195 PF17782 DprA winged helix domain NO935_03200 PF01476 LysM domain NO935_03205 PF01327 Polypeptide deformylase NO935_03210 PF02911 Formyl transferase, C-terminal domain NO935_03210 PF00551 Formyl transferase NO935_03215 PF01189 16S rRNA methyltransferase RsmB/F NO935_03215 PF01029 NusB family NO935_03230 PF00535 Glycosyl transferase family 2 NO935_03250 PF00925 GTP cyclohydrolase II NO935_03265 PF03279 Bacterial lipid A biosynthesis acyltransferase NO935_03270 PF02580 D-Tyr-tRNA(Tyr) deacylase NO935_03275 PF04546 Sigma-70, non-essential region NO935_03275 PF03979 Sigma-70 factor, region 1.1 NO935_03275 PF00140 Sigma-70 factor, region 1.2 NO935_03275 PF04542 Sigma-70 region 2 NO935_03275 PF04539 Sigma-70 region 3 NO935_03275 PF04545 Sigma-70, region 4 NO935_03350 PF00005 ABC transporter NO935_03365 PF00593 TonB dependent receptor NO935_03365 PF07715 TonB-dependent Receptor Plug Domain NO935_03410 PF10410 DnaB-helicase binding domain of primase NO935_03410 PF08278 DNA primase DnaG DnaB-binding NO935_03410 PF08275 DNA primase catalytic core, N-terminal domain NO935_03410 PF01807 CHC2 zinc finger NO935_03415 PF03631 Virulence factor BrkB NO935_03425 PF13340 Putative transposase of IS4/5 family (DUF4096) NO935_03430 PF09424 Yqey-like protein NO935_03435 PF01165 Ribosomal protein S21 NO935_03440 PF00814 Glycoprotease family NO935_03445 PF02152 Dihydroneopterin aldolase NO935_03450 PF01915 Glycosyl hydrolase family 3 C-terminal domain NO935_03450 PF14310 Fibronectin type III-like domain NO935_03450 PF00933 Glycosyl hydrolase family 3 N terminal domain NO935_03490 PF07995 Glucose / Sorbosone dehydrogenase NO935_03495 PF05360 yiaA/B two helix domain NO935_03525 PF13520 Amino acid permease NO935_03555 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NO935_03555 PF13378 Enolase C-terminal domain-like NO935_03565 PF01510 N-acetylmuramoyl-L-alanine amidase NO935_03570 PF01427 D-ala-D-ala dipeptidase NO935_03640 PF02803 Thiolase, C-terminal domain NO935_03640 PF00108 Thiolase, N-terminal domain NO935_03685 PF03301 Tryptophan 2,3-dioxygenase NO935_03690 PF00854 POT family NO935_03700 PF01047 MarR family NO935_03705 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NO935_03710 PF04209 homogentisate 1,2-dioxygenase NO935_03720 PF03334 Na+/H+ antiporter subunit NO935_03725 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) NO935_03735 PF00361 Proton-conducting membrane transporter NO935_03740 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NO935_03745 PF13244 Domain of unknown function (DUF4040) NO935_03745 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter NO935_03745 PF00361 Proton-conducting membrane transporter NO935_03745 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NO935_03785 PF01259 SAICAR synthetase NO935_03790 PF00226 DnaJ domain NO935_03790 PF05099 Tellurite resistance protein TerB NO935_03795 PF00834 Ribulose-phosphate 3 epimerase family NO935_03800 PF00583 Acetyltransferase (GNAT) family NO935_03805 PF00781 Diacylglycerol kinase catalytic domain NO935_03810 PF04715 Anthranilate synthase component I, N terminal region NO935_03810 PF00425 chorismate binding enzyme NO935_03820 PF13276 HTH-like domain NO935_03820 PF13683 Integrase core domain NO935_03830 PF00106 short chain dehydrogenase NO935_03870 PF07759 Protein of unknown function (DUF1615) NO935_03890 PF00892 EamA-like transporter family NO935_03895 PF03330 Lytic transglycolase NO935_03900 PF01341 Glycosyl hydrolases family 6 NO935_03900 PF00041 Fibronectin type III domain NO935_03900 PF00553 Cellulose binding domain NO935_03910 PF00324 Amino acid permease NO935_03920 PF01544 CorA-like Mg2+ transporter protein NO935_03940 PF01204 Trehalase NO935_03975 PF03707 Bacterial signalling protein N terminal repeat NO935_03975 PF00563 EAL domain NO935_03975 PF00990 Diguanylate cyclase, GGDEF domain NO935_03990 PF00553 Cellulose binding domain NO935_03990 PF00150 Cellulase (glycosyl hydrolase family 5) NO935_03995 PF00916 Sulfate permease family NO935_03995 PF01740 STAS domain NO935_04025 PF13632 Glycosyl transferase family group 2 NO935_04035 PF06580 Histidine kinase NO935_04035 PF07694 5TMR of 5TMR-LYT NO935_04040 PF00072 Response regulator receiver domain NO935_04040 PF04397 LytTr DNA-binding domain NO935_04045 PF03900 Porphobilinogen deaminase, C-terminal domain NO935_04045 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain NO935_04070 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NO935_04070 PF00326 Prolyl oligopeptidase family NO935_04085 PF05598 Transposase domain (DUF772) NO935_04085 PF01609 Transposase DDE domain NO935_04090 PF00155 Aminotransferase class I and II NO935_04095 PF00326 Prolyl oligopeptidase family NO935_04095 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NO935_04110 PF01678 Diaminopimelate epimerase NO935_04120 PF00589 Phage integrase family NO935_04120 PF02899 Phage integrase, N-terminal SAM-like domain NO935_04130 PF00227 Proteasome subunit NO935_04135 PF00004 ATPase family associated with various cellular activities (AAA) NO935_04135 PF07724 AAA domain (Cdc48 subfamily) NO935_04135 PF10431 C-terminal, D2-small domain, of ClpB protein NO935_04150 PF11838 ERAP1-like C-terminal domain NO935_04150 PF01433 Peptidase family M1 domain NO935_04155 PF00990 Diguanylate cyclase, GGDEF domain NO935_04155 PF08448 PAS fold NO935_04160 PF01209 ubiE/COQ5 methyltransferase family NO935_04170 PF13533 Biotin-lipoyl like NO935_04180 PF13673 Acetyltransferase (GNAT) domain NO935_04200 PF00294 pfkB family carbohydrate kinase NO935_04210 PF04085 rod shape-determining protein MreC NO935_04220 PF03717 Penicillin-binding Protein dimerisation domain NO935_04220 PF00905 Penicillin binding protein transpeptidase domain NO935_04225 PF01098 Cell cycle protein NO935_04235 PF04717 Type VI secretion system, phage-baseplate injector NO935_04260 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) NO935_04260 PF13296 Putative type VI secretion system Rhs element Vgr NO935_04260 PF04717 Type VI secretion system, phage-baseplate injector NO935_04265 PF01471 Putative peptidoglycan binding domain NO935_04265 PF01476 LysM domain NO935_04265 PF01510 N-acetylmuramoyl-L-alanine amidase NO935_04290 PF13406 Transglycosylase SLT domain NO935_04295 PF05036 Sporulation related domain NO935_04295 PF03330 Lytic transglycolase NO935_04300 PF00768 D-alanyl-D-alanine carboxypeptidase NO935_04300 PF07943 Penicillin-binding protein 5, C-terminal domain NO935_04315 PF04359 Protein of unknown function (DUF493) NO935_04320 PF03099 Biotin/lipoate A/B protein ligase family NO935_04325 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family NO935_04325 PF04055 Radical SAM superfamily NO935_04330 PF11818 C-terminal domain of tail specific protease (DUF3340) NO935_04330 PF17804 Tail specific protease N-terminal domain NO935_04330 PF03572 Peptidase family S41 NO935_04330 PF00595 PDZ domain NO935_04340 PF00293 NUDIX domain NO935_04340 PF01467 Cytidylyltransferase-like NO935_04375 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NO935_04375 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain NO935_04380 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NO935_04380 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NO935_04385 PF04972 BON domain NO935_04390 PF01590 GAF domain NO935_04390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NO935_04390 PF00512 His Kinase A (phospho-acceptor) domain NO935_04390 PF00360 Phytochrome region NO935_04390 PF08446 PAS fold NO935_04395 PF00072 Response regulator receiver domain NO935_04400 PF00512 His Kinase A (phospho-acceptor) domain NO935_04400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NO935_04405 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NO935_04455 PF00703 Glycosyl hydrolases family 2 NO935_04455 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 NO935_04455 PF16355 Domain of unknown function (DUF4982) NO935_04455 PF02837 Glycosyl hydrolases family 2, sugar binding domain NO935_04455 PF02836 Glycosyl hydrolases family 2, TIM barrel domain NO935_04470 PF00392 Bacterial regulatory proteins, gntR family NO935_04470 PF07702 UTRA domain NO935_04475 PF07690 Major Facilitator Superfamily NO935_04480 PF00356 Bacterial regulatory proteins, lacI family NO935_04485 PF01380 SIS domain NO935_04490 PF01979 Amidohydrolase family NO935_04500 PF00535 Glycosyl transferase family 2 NO935_04505 PF01522 Polysaccharide deacetylase NO935_04505 PF14883 Hypothetical glycosyl hydrolase family 13 NO935_04540 PF05598 Transposase domain (DUF772) NO935_04540 PF01609 Transposase DDE domain NO935_04550 PF12627 Probable RNA and SrmB- binding site of polymerase A NO935_04550 PF01743 Poly A polymerase head domain NO935_04550 PF01966 HD domain NO935_04585 PF05598 Transposase domain (DUF772) NO935_04585 PF01609 Transposase DDE domain NO935_04590 PF00291 Pyridoxal-phosphate dependent enzyme NO935_04590 PF13291 ACT domain NO935_04600 PF05598 Transposase domain (DUF772) NO935_04600 PF01609 Transposase DDE domain NO935_04630 PF00034 Cytochrome c NO935_04635 PF01926 50S ribosome-binding GTPase NO935_04645 PF04107 Glutamate-cysteine ligase family 2(GCS2) NO935_04675 PF16527 Two-component sensor protein CpxA, periplasmic domain NO935_04675 PF00512 His Kinase A (phospho-acceptor) domain NO935_04675 PF00672 HAMP domain NO935_04675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NO935_04680 PF00486 Transcriptional regulatory protein, C terminal NO935_04680 PF00072 Response regulator receiver domain NO935_04695 PF02583 Metal-sensitive transcriptional repressor NO935_04700 PF00107 Zinc-binding dehydrogenase NO935_04700 PF08240 Alcohol dehydrogenase GroES-like domain NO935_04705 PF04828 Glutathione-dependent formaldehyde-activating enzyme NO935_04710 PF00756 Putative esterase NO935_04730 PF00005 ABC transporter NO935_04730 PF12848 ABC transporter NO935_04750 PF00464 Serine hydroxymethyltransferase NO935_04760 PF03477 ATP cone domain NO935_04770 PF01872 RibD C-terminal domain NO935_04770 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NO935_04780 PF00677 Lumazine binding domain NO935_04785 PF00925 GTP cyclohydrolase II NO935_04785 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NO935_04790 PF00885 6,7-dimethyl-8-ribityllumazine synthase NO935_04795 PF01029 NusB family NO935_04800 PF00586 AIR synthase related protein, N-terminal domain NO935_04800 PF02769 AIR synthase related protein, C-terminal domain NO935_04820 PF03814 Potassium-transporting ATPase A subunit NO935_04830 PF02669 K+-transporting ATPase, c chain NO935_04835 PF13493 Domain of unknown function (DUF4118) NO935_04835 PF13492 GAF domain NO935_04835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NO935_04835 PF00512 His Kinase A (phospho-acceptor) domain NO935_04835 PF02702 Osmosensitive K+ channel His kinase sensor domain NO935_04840 PF00486 Transcriptional regulatory protein, C terminal NO935_04840 PF00072 Response regulator receiver domain NO935_04845 PF02913 FAD linked oxidases, C-terminal domain NO935_04845 PF01565 FAD binding domain NO935_04850 PF04307 LexA-binding, inner membrane-associated putative hydrolase NO935_04855 PF02021 Uncharacterised protein family UPF0102 NO935_04865 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NO935_04885 PF02381 MraZ protein, putative antitoxin-like NO935_04890 PF01795 MraW methylase family NO935_04895 PF04999 Cell division protein FtsL NO935_04900 PF03717 Penicillin-binding Protein dimerisation domain NO935_04900 PF00905 Penicillin binding protein transpeptidase domain NO935_04905 PF08245 Mur ligase middle domain NO935_04905 PF02875 Mur ligase family, glutamate ligase domain NO935_04905 PF01225 Mur ligase family, catalytic domain NO935_04910 PF02875 Mur ligase family, glutamate ligase domain NO935_04910 PF08245 Mur ligase middle domain NO935_04910 PF01225 Mur ligase family, catalytic domain NO935_04915 PF00953 Glycosyl transferase family 4 NO935_04920 PF01098 Cell cycle protein NO935_04925 PF04101 Glycosyltransferase family 28 C-terminal domain NO935_04925 PF03033 Glycosyltransferase family 28 N-terminal domain NO935_04930 PF01225 Mur ligase family, catalytic domain NO935_04930 PF02875 Mur ligase family, glutamate ligase domain NO935_04930 PF08245 Mur ligase middle domain NO935_04935 PF01820 D-ala D-ala ligase N-terminus NO935_04935 PF07478 D-ala D-ala ligase C-terminus NO935_04940 PF03799 Cell division protein FtsQ NO935_04940 PF08478 POTRA domain, FtsQ-type NO935_04945 PF02491 SHS2 domain inserted in FTSA NO935_04950 PF12327 FtsZ family, C-terminal domain NO935_04950 PF00091 Tubulin/FtsZ family, GTPase domain NO935_04955 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase NO935_04965 PF01476 LysM domain NO935_04965 PF01551 Peptidase family M23 NO935_04970 PF01043 SecA preprotein cross-linking domain NO935_04970 PF07517 SecA DEAD-like domain NO935_04970 PF07516 SecA Wing and Scaffold domain NO935_04970 PF02810 SEC-C motif NO935_04980 PF00293 NUDIX domain NO935_05000 PF02219 Methylenetetrahydrofolate reductase NO935_05010 PF00698 Acyl transferase domain NO935_05010 PF00550 Phosphopantetheine attachment site NO935_05010 PF08240 Alcohol dehydrogenase GroES-like domain NO935_05010 PF00107 Zinc-binding dehydrogenase NO935_05010 PF16197 Ketoacyl-synthetase C-terminal extension NO935_05010 PF00109 Beta-ketoacyl synthase, N-terminal domain NO935_05010 PF02801 Beta-ketoacyl synthase, C-terminal domain NO935_05010 PF08659 KR domain NO935_05010 PF14765 Polyketide synthase dehydratase NO935_05025 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NO935_05055 PF13649 Methyltransferase domain NO935_05060 PF05221 S-adenosyl-L-homocysteine hydrolase NO935_05060 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NO935_05070 PF00311 Phosphoenolpyruvate carboxylase NO935_05095 PF00328 Histidine phosphatase superfamily (branch 2) NO935_05100 PF00438 S-adenosylmethionine synthetase, N-terminal domain NO935_05100 PF02773 S-adenosylmethionine synthetase, C-terminal domain NO935_05100 PF02772 S-adenosylmethionine synthetase, central domain NO935_05115 PF01207 Dihydrouridine synthase (Dus) NO935_05125 PF00294 pfkB family carbohydrate kinase NO935_05130 PF07662 Na+ dependent nucleoside transporter C-terminus NO935_05130 PF07670 Nucleoside recognition NO935_05130 PF01773 Na+ dependent nucleoside transporter N-terminus NO935_05140 PF00248 Aldo/keto reductase family NO935_05180 PF00005 ABC transporter NO935_05185 PF00005 ABC transporter NO935_05195 PF02668 Taurine catabolism dioxygenase TauD, TfdA family NO935_05205 PF00005 ABC transporter NO935_05210 PF13472 GDSL-like Lipase/Acylhydrolase family NO935_05215 PF00072 Response regulator receiver domain NO935_05215 PF00486 Transcriptional regulatory protein, C terminal NO935_05220 PF08521 Two-component sensor kinase N-terminal NO935_05220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NO935_05220 PF00512 His Kinase A (phospho-acceptor) domain NO935_05240 PF01219 Prokaryotic diacylglycerol kinase NO935_05260 PF01790 Prolipoprotein diacylglyceryl transferase NO935_05265 PF00303 Thymidylate synthase NO935_05275 PF00186 Dihydrofolate reductase NO935_05280 PF00149 Calcineurin-like phosphoesterase NO935_05285 PF04379 ApaG domain NO935_05290 PF00398 Ribosomal RNA adenine dimethylase NO935_05300 PF04166 Pyridoxal phosphate biosynthetic protein PdxA NO935_05305 PF00639 PPIC-type PPIASE domain NO935_05305 PF09312 SurA N-terminal domain NO935_05310 PF04453 LPS transport system D NO935_05310 PF03968 OstA-like protein NO935_05315 PF00850 Histone deacetylase domain NO935_05320 PF01923 Cobalamin adenosyltransferase NO935_05330 PF01494 FAD binding domain NO935_05335 PF01494 FAD binding domain NO935_05365 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase NO935_05375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NO935_05375 PF03466 LysR substrate binding domain NO935_05380 PF00501 AMP-binding enzyme NO935_05380 PF13193 AMP-binding enzyme C-terminal domain NO935_05385 PF00171 Aldehyde dehydrogenase family NO935_05390 PF00378 Enoyl-CoA hydratase/isomerase NO935_05410 PF08450 SMP-30/Gluconolactonase/LRE-like region NO935_05415 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NO935_05415 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NO935_05475 PF00749 tRNA synthetases class I (E and Q), catalytic domain NO935_05475 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain NO935_05490 PF00990 Diguanylate cyclase, GGDEF domain NO935_05490 PF00072 Response regulator receiver domain NO935_05520 PF00196 Bacterial regulatory proteins, luxR family NO935_05520 PF00072 Response regulator receiver domain NO935_05530 PF01625 Peptide methionine sulfoxide reductase NO935_05550 PF00255 Glutathione peroxidase NO935_05565 PF00923 Transaldolase/Fructose-6-phosphate aldolase NO935_05570 PF01272 Transcription elongation factor, GreA/GreB, C-term NO935_05570 PF03449 Transcription elongation factor, N-terminal NO935_05575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NO935_05575 PF03466 LysR substrate binding domain NO935_05580 PF07992 Pyridine nucleotide-disulphide oxidoreductase NO935_05580 PF13192 Thioredoxin domain NO935_05585 PF10417 C-terminal domain of 1-Cys peroxiredoxin NO935_05585 PF00578 AhpC/TSA family NO935_05590 PF17827 PrmC N-terminal domain NO935_05590 PF05175 Methyltransferase small domain NO935_05615 PF00561 alpha/beta hydrolase fold NO935_05625 PF00293 NUDIX domain NO935_05630 PF01367 5'-3' exonuclease, C-terminal SAM fold NO935_05630 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NO935_05630 PF00476 DNA polymerase family A NO935_05630 PF01612 3'-5' exonuclease NO935_05645 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NO935_05645 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NO935_05645 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch NO935_05665 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch NO935_05670 PF02233 NAD(P) transhydrogenase beta subunit NO935_05695 PF01063 Amino-transferase class IV NO935_05705 PF00082 Subtilase family NO935_05705 PF04151 Bacterial pre-peptidase C-terminal domain NO935_05710 PF04151 Bacterial pre-peptidase C-terminal domain NO935_05710 PF00082 Subtilase family NO935_05715 PF04073 Aminoacyl-tRNA editing domain NO935_05725 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain NO935_05725 PF17189 Glycosyl hydrolase family 30 beta sandwich domain NO935_05740 PF03358 NADPH-dependent FMN reductase NO935_05745 PF03631 Virulence factor BrkB NO935_05750 PF08534 Redoxin NO935_05755 PF00708 Acylphosphatase NO935_05765 PF03976 Polyphosphate kinase 2 (PPK2) NO935_05770 PF00994 Probable molybdopterin binding domain NO935_05780 PF03462 PCRF domain NO935_05780 PF00472 RF-1 domain NO935_05785 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain NO935_05785 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain NO935_05785 PF01488 Shikimate / quinate 5-dehydrogenase NO935_05795 PF03550 Outer membrane lipoprotein LolB NO935_05800 PF08544 GHMP kinases C terminal NO935_05800 PF00288 GHMP kinases N terminal domain NO935_05810 PF14572 Phosphoribosyl synthetase-associated domain NO935_05810 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NO935_05815 PF01386 Ribosomal L25p family NO935_05815 PF14693 Ribosomal protein TL5, C-terminal domain NO935_05820 PF01195 Peptidyl-tRNA hydrolase NO935_05825 PF01926 50S ribosome-binding GTPase NO935_05825 PF06071 Protein of unknown function (DUF933) NO935_05845 PF03144 Elongation factor Tu domain 2 NO935_05845 PF00009 Elongation factor Tu GTP binding domain NO935_05845 PF03143 Elongation factor Tu C-terminal domain NO935_05855 PF00584 SecE/Sec61-gamma subunits of protein translocation complex NO935_05860 PF02357 Transcription termination factor nusG NO935_05860 PF00467 KOW motif NO935_05865 PF03946 Ribosomal protein L11, N-terminal domain NO935_05865 PF00298 Ribosomal protein L11, RNA binding domain NO935_05870 PF00687 Ribosomal protein L1p/L10e family NO935_05875 PF00466 Ribosomal protein L10 NO935_05880 PF00542 Ribosomal protein L7/L12 C-terminal domain NO935_05880 PF16320 Ribosomal protein L7/L12 dimerisation domain NO935_05885 PF04565 RNA polymerase Rpb2, domain 3 NO935_05885 PF04563 RNA polymerase beta subunit NO935_05885 PF04561 RNA polymerase Rpb2, domain 2 NO935_05885 PF10385 RNA polymerase beta subunit external 1 domain NO935_05885 PF00562 RNA polymerase Rpb2, domain 6 NO935_05885 PF04560 RNA polymerase Rpb2, domain 7 NO935_05890 PF04998 RNA polymerase Rpb1, domain 5 NO935_05890 PF05000 RNA polymerase Rpb1, domain 4 NO935_05890 PF04983 RNA polymerase Rpb1, domain 3 NO935_05890 PF04997 RNA polymerase Rpb1, domain 1 NO935_05890 PF00623 RNA polymerase Rpb1, domain 2 NO935_05895 PF00164 Ribosomal protein S12/S23 NO935_05900 PF00177 Ribosomal protein S7p/S5e NO935_05905 PF00009 Elongation factor Tu GTP binding domain NO935_05905 PF00679 Elongation factor G C-terminus NO935_05905 PF14492 Elongation Factor G, domain II NO935_05905 PF03764 Elongation factor G, domain IV NO935_05905 PF03144 Elongation factor Tu domain 2 NO935_05910 PF03143 Elongation factor Tu C-terminal domain NO935_05910 PF03144 Elongation factor Tu domain 2 NO935_05910 PF00009 Elongation factor Tu GTP binding domain NO935_05920 PF00338 Ribosomal protein S10p/S20e NO935_05925 PF00297 Ribosomal protein L3 NO935_05930 PF00573 Ribosomal protein L4/L1 family NO935_05935 PF00276 Ribosomal protein L23 NO935_05940 PF03947 Ribosomal Proteins L2, C-terminal domain NO935_05940 PF00181 Ribosomal Proteins L2, RNA binding domain NO935_05945 PF00203 Ribosomal protein S19 NO935_05950 PF00237 Ribosomal protein L22p/L17e NO935_05955 PF07650 KH domain NO935_05955 PF00189 Ribosomal protein S3, C-terminal domain NO935_05960 PF00252 Ribosomal protein L16p/L10e NO935_05965 PF00831 Ribosomal L29 protein NO935_05970 PF00366 Ribosomal protein S17 NO935_05975 PF00238 Ribosomal protein L14p/L23e NO935_05980 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 NO935_05980 PF00467 KOW motif NO935_05985 PF00281 Ribosomal protein L5 NO935_05985 PF00673 ribosomal L5P family C-terminus NO935_05990 PF00253 Ribosomal protein S14p/S29e NO935_05995 PF00410 Ribosomal protein S8 NO935_06000 PF00347 Ribosomal protein L6 NO935_06005 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast NO935_06010 PF00333 Ribosomal protein S5, N-terminal domain NO935_06010 PF03719 Ribosomal protein S5, C-terminal domain NO935_06015 PF00327 Ribosomal protein L30p/L7e NO935_06020 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A NO935_06025 PF00344 SecY translocase NO935_06030 PF00416 Ribosomal protein S13/S18 NO935_06035 PF00411 Ribosomal protein S11 NO935_06040 PF00163 Ribosomal protein S4/S9 N-terminal domain NO935_06040 PF01479 S4 domain NO935_06045 PF01000 RNA polymerase Rpb3/RpoA insert domain NO935_06045 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain NO935_06045 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain NO935_06050 PF01196 Ribosomal protein L17 NO935_06100 PF02347 Glycine cleavage system P-protein NO935_06120 PF03412 Peptidase C39 family NO935_06120 PF00005 ABC transporter NO935_06120 PF00664 ABC transporter transmembrane region NO935_06140 PF08019 Phosphoethanolamine transferase EptA/EptB NO935_06140 PF00884 Sulfatase NO935_06150 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase NO935_06155 PF00486 Transcriptional regulatory protein, C terminal NO935_06155 PF00072 Response regulator receiver domain NO935_06160 PF00512 His Kinase A (phospho-acceptor) domain NO935_06160 PF08521 Two-component sensor kinase N-terminal NO935_06160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NO935_06170 PF03776 Septum formation topological specificity factor MinE NO935_06175 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NO935_06180 PF05209 Septum formation inhibitor MinC, N-terminal domain NO935_06180 PF03775 Septum formation inhibitor MinC, C-terminal domain NO935_06195 PF07730 Histidine kinase NO935_06200 PF00072 Response regulator receiver domain NO935_06200 PF00196 Bacterial regulatory proteins, luxR family NO935_06215 PF00730 HhH-GPD superfamily base excision DNA repair protein NO935_06240 PF02222 ATP-grasp domain NO935_06280 PF06761 Intracellular multiplication and human macrophage-killing NO935_06280 PF14331 ImcF-related N-terminal domain NO935_06280 PF06744 Type VI secretion protein IcmF C-terminal NO935_06290 PF04972 BON domain NO935_06290 PF00691 OmpA family NO935_06305 PF06715 Gp5 C-terminal repeat (3 copies) NO935_06305 PF04717 Type VI secretion system, phage-baseplate injector NO935_06315 PF03781 Sulfatase-modifying factor enzyme 1 NO935_06325 PF03781 Sulfatase-modifying factor enzyme 1 NO935_06330 PF04717 Type VI secretion system, phage-baseplate injector NO935_06350 PF05598 Transposase domain (DUF772) NO935_06350 PF01609 Transposase DDE domain NO935_06365 PF05598 Transposase domain (DUF772) NO935_06365 PF01609 Transposase DDE domain NO935_06380 PF05598 Transposase domain (DUF772) NO935_06380 PF01609 Transposase DDE domain NO935_06410 PF02678 Pirin NO935_06410 PF05726 Pirin C-terminal cupin domain NO935_06420 PF04493 Endonuclease V NO935_06425 PF00300 Histidine phosphatase superfamily (branch 1) NO935_06440 PF01431 Peptidase family M13 NO935_06440 PF05649 Peptidase family M13 NO935_06450 PF00072 Response regulator receiver domain NO935_06450 PF01339 CheB methylesterase NO935_06455 PF01739 CheR methyltransferase, SAM binding domain NO935_06455 PF03705 CheR methyltransferase, all-alpha domain NO935_06460 PF13426 PAS domain NO935_06460 PF00563 EAL domain NO935_06460 PF00990 Diguanylate cyclase, GGDEF domain NO935_06465 PF01584 CheW-like domain NO935_06470 PF00672 HAMP domain NO935_06470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NO935_06470 PF02203 Tar ligand binding domain homologue NO935_06475 PF01584 CheW-like domain NO935_06475 PF01627 Hpt domain NO935_06475 PF02895 Signal transducing histidine kinase, homodimeric domain NO935_06475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NO935_06475 PF09078 CheY binding NO935_06490 PF02559 CarD-like/TRCF domain NO935_06490 PF00270 DEAD/DEAH box helicase NO935_06490 PF03461 TRCF domain NO935_06490 PF17757 UvrB interaction domain NO935_06490 PF00271 Helicase conserved C-terminal domain NO935_06500 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ NO935_06540 PF05598 Transposase domain (DUF772) NO935_06540 PF01609 Transposase DDE domain NO935_06545 PF00145 C-5 cytosine-specific DNA methylase NO935_06590 PF00795 Carbon-nitrogen hydrolase NO935_06600 PF00749 tRNA synthetases class I (E and Q), catalytic domain NO935_06605 PF01475 Ferric uptake regulator family NO935_06650 PF00313 'Cold-shock' DNA-binding domain NO935_06665 PF00899 ThiF family NO935_06670 PF01026 TatD related DNase NO935_06685 PF02770 Acyl-CoA dehydrogenase, middle domain NO935_06685 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NO935_06685 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NO935_06695 PF13417 Glutathione S-transferase, N-terminal domain NO935_06700 PF13537 Glutamine amidotransferase domain NO935_06700 PF00733 Asparagine synthase NO935_06705 PF03358 NADPH-dependent FMN reductase NO935_06710 PF00772 DnaB-like helicase N terminal domain NO935_06710 PF03796 DnaB-like helicase C terminal domain NO935_06715 PF00875 DNA photolyase NO935_06715 PF03441 FAD binding domain of DNA photolyase NO935_06725 PF00691 OmpA family NO935_06725 PF05736 OprF membrane domain NO935_06765 PF08240 Alcohol dehydrogenase GroES-like domain NO935_06765 PF00107 Zinc-binding dehydrogenase NO935_06770 PF00654 Voltage gated chloride channel NO935_06780 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NO935_06780 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NO935_06785 PF02805 Metal binding domain of Ada NO935_06785 PF06029 AlkA N-terminal domain NO935_06785 PF00730 HhH-GPD superfamily base excision DNA repair protein NO935_06785 PF12833 Helix-turn-helix domain NO935_06840 PF00271 Helicase conserved C-terminal domain NO935_06840 PF00270 DEAD/DEAH box helicase NO935_06840 PF03880 DbpA RNA binding domain NO935_06845 PF00563 EAL domain NO935_06845 PF00990 Diguanylate cyclase, GGDEF domain NO935_06845 PF08448 PAS fold NO935_06850 PF00849 RNA pseudouridylate synthase NO935_06850 PF01479 S4 domain NO935_06870 PF03737 Aldolase/RraA NO935_06875 PF00144 Beta-lactamase NO935_06880 PF00999 Sodium/hydrogen exchanger family NO935_06885 PF00672 HAMP domain NO935_06885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NO935_06885 PF00512 His Kinase A (phospho-acceptor) domain NO935_06890 PF00072 Response regulator receiver domain NO935_06890 PF00486 Transcriptional regulatory protein, C terminal NO935_06895 PF02321 Outer membrane efflux protein NO935_06910 PF00873 AcrB/AcrD/AcrF family NO935_06920 PF00005 ABC transporter NO935_06920 PF00664 ABC transporter transmembrane region NO935_06945 PF01121 Dephospho-CoA kinase NO935_06950 PF06750 Bacterial Peptidase A24 N-terminal domain NO935_06950 PF01478 Type IV leader peptidase family NO935_06955 PF00482 Type II secretion system (T2SS), protein F NO935_06960 PF07963 Prokaryotic N-terminal methylation motif NO935_06960 PF00114 Pilin (bacterial filament) NO935_06965 PF08019 Phosphoethanolamine transferase EptA/EptB NO935_06965 PF00884 Sulfatase NO935_06975 PF17284 Spermidine synthase tetramerisation domain NO935_06980 PF00437 Type II/IV secretion system protein NO935_06980 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NO935_06985 PF02661 Fic/DOC family NO935_06985 PF18543 Intracellular delivery domain NO935_07000 PF00158 Sigma-54 interaction domain NO935_07000 PF00072 Response regulator receiver domain NO935_07000 PF02954 Bacterial regulatory protein, Fis family NO935_07005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NO935_07005 PF00512 His Kinase A (phospho-acceptor) domain NO935_07010 PF08442 ATP-grasp domain NO935_07010 PF00549 CoA-ligase NO935_07015 PF02629 CoA binding domain NO935_07015 PF00549 CoA-ligase NO935_07025 PF00795 Carbon-nitrogen hydrolase NO935_07025 PF02540 NAD synthase NO935_07030 PF13525 Outer membrane lipoprotein NO935_07035 PF00849 RNA pseudouridylate synthase NO935_07040 PF02578 Multi-copper polyphenol oxidoreductase laccase NO935_07055 PF00982 Glycosyltransferase family 20 NO935_07060 PF00723 Glycosyl hydrolases family 15 NO935_07065 PF02358 Trehalose-phosphatase NO935_07075 PF07715 TonB-dependent Receptor Plug Domain NO935_07075 PF00593 TonB dependent receptor NO935_07105 PF04376 Arginine-tRNA-protein transferase, N terminus NO935_07105 PF04377 Arginine-tRNA-protein transferase, C terminus NO935_07135 PF00378 Enoyl-CoA hydratase/isomerase NO935_07150 PF00005 ABC transporter NO935_07150 PF17755 UvrA DNA-binding domain NO935_07150 PF17760 UvrA interaction domain NO935_07155 PF00829 Ribosomal prokaryotic L21 protein NO935_07160 PF01016 Ribosomal L27 protein NO935_07165 PF01926 50S ribosome-binding GTPase NO935_07165 PF01018 GTP1/OBG NO935_07170 PF01649 Ribosomal protein S20 NO935_07175 PF03023 Lipid II flippase MurJ NO935_07180 PF06574 FAD synthetase NO935_07180 PF01687 Riboflavin kinase NO935_07185 PF06827 Zinc finger found in FPG and IleRS NO935_07185 PF00133 tRNA synthetases class I (I, L, M and V) NO935_07185 PF08264 Anticodon-binding domain of tRNA NO935_07190 PF01252 Signal peptidase (SPase) II NO935_07195 PF02401 LytB protein NO935_07205 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NO935_07205 PF06481 COX Aromatic Rich Motif NO935_07210 PF00115 Cytochrome C and Quinol oxidase polypeptide I NO935_07215 PF00510 Cytochrome c oxidase subunit III NO935_07220 PF03626 Prokaryotic Cytochrome C oxidase subunit IV NO935_07230 PF06715 Gp5 C-terminal repeat (3 copies) NO935_07230 PF04717 Type VI secretion system, phage-baseplate injector NO935_07245 PF05593 RHS Repeat NO935_07245 PF03527 RHS protein NO935_07260 PF00872 Transposase, Mutator family NO935_07280 PF14220 Domain of unknown function (DUF4329) NO935_07280 PF05593 RHS Repeat NO935_07280 PF03527 RHS protein NO935_07280 PF05593 RHS Repeat NO935_07280 PF03527 RHS protein NO935_07280 PF14220 Domain of unknown function (DUF4329) NO935_07305 PF01609 Transposase DDE domain NO935_07305 PF05598 Transposase domain (DUF772) NO935_07345 PF01624 MutS domain I NO935_07345 PF05188 MutS domain II NO935_07345 PF05192 MutS domain III NO935_07345 PF00488 MutS domain V NO935_07345 PF05190 MutS family domain IV NO935_07360 PF18073 Rubredoxin metal binding domain NO935_07395 PF01336 OB-fold nucleic acid binding domain NO935_07395 PF02938 GAD domain NO935_07395 PF00152 tRNA synthetases class II (D, K and N) NO935_07410 PF01709 Transcriptional regulator NO935_07415 PF02075 Crossover junction endodeoxyribonuclease RuvC NO935_07420 PF07499 RuvA, C-terminal domain NO935_07420 PF01330 RuvA N terminal domain NO935_07425 PF02705 K+ potassium transporter NO935_07430 PF05491 RuvB C-terminal winged helix domain NO935_07430 PF05496 Holliday junction DNA helicase RuvB P-loop domain NO935_07430 PF17864 RuvB AAA lid domain NO935_07435 PF03061 Thioesterase superfamily NO935_07440 PF01618 MotA/TolQ/ExbB proton channel family NO935_07445 PF02472 Biopolymer transport protein ExbD/TolR NO935_07455 PF07676 WD40-like Beta Propeller Repeat NO935_07455 PF04052 TolB amino-terminal domain NO935_07460 PF00691 OmpA family NO935_07470 PF04055 Radical SAM superfamily NO935_07490 PF05598 Transposase domain (DUF772) NO935_07500 PF06508 Queuosine biosynthesis protein QueC NO935_07525 PF00270 DEAD/DEAH box helicase NO935_07525 PF00570 HRDC domain NO935_07525 PF16124 RecQ zinc-binding NO935_07525 PF09382 RQC domain NO935_07525 PF00271 Helicase conserved C-terminal domain NO935_07530 PF00210 Ferritin-like domain NO935_07535 PF00270 DEAD/DEAH box helicase NO935_07535 PF11898 Domain of unknown function (DUF3418) NO935_07535 PF04408 Helicase associated domain (HA2) NO935_07535 PF00271 Helicase conserved C-terminal domain NO935_07535 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold NO935_07560 PF04055 Radical SAM superfamily NO935_07560 PF13186 Iron-sulfur cluster-binding domain NO935_07565 PF05402 Coenzyme PQQ synthesis protein D (PqqD) NO935_07570 PF03070 TENA/THI-4/PQQC family NO935_07575 PF12706 Beta-lactamase superfamily domain NO935_07580 PF08042 PqqA family NO935_07585 PF13291 ACT domain NO935_07585 PF04607 Region found in RelA / SpoT proteins NO935_07585 PF02824 TGS domain NO935_07595 PF00535 Glycosyl transferase family 2 NO935_07600 PF14814 Bifunctional transglycosylase second domain NO935_07600 PF00905 Penicillin binding protein transpeptidase domain NO935_07600 PF00912 Transglycosylase NO935_07610 PF13307 Helicase C-terminal domain NO935_07610 PF04851 Type III restriction enzyme, res subunit NO935_07615 PF00814 Glycoprotease family NO935_07630 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain NO935_07630 PF02951 Prokaryotic glutathione synthetase, N-terminal domain NO935_07635 PF00072 Response regulator receiver domain NO935_07640 PF00072 Response regulator receiver domain NO935_07645 PF01584 CheW-like domain NO935_07650 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term NO935_07650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NO935_07655 PF01584 CheW-like domain NO935_07655 PF02895 Signal transducing histidine kinase, homodimeric domain NO935_07655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NO935_07655 PF01627 Hpt domain NO935_07655 PF00072 Response regulator receiver domain NO935_07670 PF13302 Acetyltransferase (GNAT) domain NO935_07685 PF00092 von Willebrand factor type A domain NO935_07685 PF12034 Domain of unknown function (DUF3520) NO935_07685 PF12450 von Willebrand factor NO935_07690 PF00092 von Willebrand factor type A domain NO935_07690 PF12034 Domain of unknown function (DUF3520) NO935_07690 PF12450 von Willebrand factor NO935_07700 PF01112 Asparaginase NO935_07705 PF03932 CutC family NO935_07735 PF01301 Glycosyl hydrolases family 35 NO935_07745 PF17678 Glycosyl hydrolase family 92 N-terminal domain NO935_07745 PF07971 Glycosyl hydrolase family 92 NO935_07820 PF00005 ABC transporter NO935_07820 PF00664 ABC transporter transmembrane region NO935_07820 PF03412 Peptidase C39 family NO935_07825 PF14310 Fibronectin type III-like domain NO935_07825 PF01915 Glycosyl hydrolase family 3 C-terminal domain NO935_07825 PF07691 PA14 domain NO935_07825 PF00933 Glycosyl hydrolase family 3 N terminal domain NO935_07835 PF00728 Glycosyl hydrolase family 20, catalytic domain NO935_07835 PF02838 Glycosyl hydrolase family 20, domain 2 NO935_07835 PF07691 PA14 domain NO935_07845 PF00704 Glycosyl hydrolases family 18 NO935_07845 PF01476 LysM domain NO935_07860 PF02685 Glucokinase NO935_07865 PF04452 RNA methyltransferase NO935_07870 PF00202 Aminotransferase class-III NO935_07875 PF00293 NUDIX domain NO935_07880 PF00459 Inositol monophosphatase family NO935_07885 PF03819 MazG nucleotide pyrophosphohydrolase domain NO935_07900 PF01145 SPFH domain / Band 7 family NO935_07900 PF16200 C-terminal region of band_7 NO935_07910 PF01571 Aminomethyltransferase folate-binding domain NO935_07910 PF08669 Glycine cleavage T-protein C-terminal barrel domain NO935_07915 PF01597 Glycine cleavage H-protein NO935_07945 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NO935_07945 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NO935_07945 PF09317 Domain of unknown function (DUF1974) NO935_07955 PF00440 Bacterial regulatory proteins, tetR family NO935_07960 PF07715 TonB-dependent Receptor Plug Domain NO935_07960 PF00593 TonB dependent receptor NO935_07970 PF01430 Hsp33 protein NO935_07975 PF00912 Transglycosylase NO935_07980 PF00535 Glycosyl transferase family 2 NO935_08005 PF03006 Haemolysin-III related NO935_08010 PF00009 Elongation factor Tu GTP binding domain NO935_08010 PF16658 Class II release factor RF3, C-terminal domain NO935_08015 PF01476 LysM domain NO935_08015 PF08525 Opacity-associated protein A N-terminal motif NO935_08015 PF01551 Peptidase family M23 NO935_08020 PF00561 alpha/beta hydrolase fold NO935_08025 PF01053 Cys/Met metabolism PLP-dependent enzyme NO935_08035 PF03313 Serine dehydratase alpha chain NO935_08035 PF03315 Serine dehydratase beta chain NO935_08050 PF04264 YceI-like domain NO935_08060 PF04264 YceI-like domain NO935_08065 PF00072 Response regulator receiver domain NO935_08065 PF01627 Hpt domain NO935_08065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NO935_08065 PF00512 His Kinase A (phospho-acceptor) domain NO935_08065 PF17149 Periplasmic sensor domain found in signal transduction proteins NO935_08065 PF00672 HAMP domain NO935_08070 PF00512 His Kinase A (phospho-acceptor) domain NO935_08070 PF17149 Periplasmic sensor domain found in signal transduction proteins NO935_08070 PF00672 HAMP domain NO935_08070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NO935_08070 PF00072 Response regulator receiver domain NO935_08070 PF01627 Hpt domain NO935_08075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NO935_08075 PF00672 HAMP domain NO935_08075 PF17149 Periplasmic sensor domain found in signal transduction proteins NO935_08075 PF01627 Hpt domain NO935_08075 PF00072 Response regulator receiver domain NO935_08075 PF00512 His Kinase A (phospho-acceptor) domain NO935_08120 PF01381 Helix-turn-helix NO935_08120 PF06114 IrrE N-terminal-like domain NO935_08120 PF09856 Predicted transcriptional regulator (DUF2083) NO935_08125 PF00171 Aldehyde dehydrogenase family NO935_08130 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NO935_08130 PF02770 Acyl-CoA dehydrogenase, middle domain NO935_08130 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NO935_08135 PF00378 Enoyl-CoA hydratase/isomerase NO935_08140 PF00378 Enoyl-CoA hydratase/isomerase NO935_08140 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NO935_08140 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NO935_08145 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NO935_08145 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NO935_08150 PF01545 Cation efflux family NO935_08155 PF00378 Enoyl-CoA hydratase/isomerase NO935_08155 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NO935_08155 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NO935_08160 PF04542 Sigma-70 region 2 NO935_08160 PF08281 Sigma-70, region 4 NO935_08170 PF13180 PDZ domain NO935_08175 PF06421 GTP-binding protein LepA C-terminus NO935_08175 PF00009 Elongation factor Tu GTP binding domain NO935_08175 PF00679 Elongation factor G C-terminus NO935_08175 PF03144 Elongation factor Tu domain 2 NO935_08180 PF10502 Signal peptidase, peptidase S26 NO935_08190 PF14622 Ribonuclease-III-like NO935_08190 PF00035 Double-stranded RNA binding motif NO935_08195 PF01926 50S ribosome-binding GTPase NO935_08195 PF07650 KH domain NO935_08200 PF11967 Recombination protein O N terminal NO935_08200 PF02565 Recombination protein O C terminal NO935_08210 PF05958 tRNA (Uracil-5-)-methyltransferase NO935_08215 PF01928 CYTH domain NO935_08235 PF01593 Flavin containing amine oxidoreductase NO935_08240 PF04244 Deoxyribodipyrimidine photo-lyase-related protein NO935_08245 PF00933 Glycosyl hydrolase family 3 N terminal domain NO935_08250 PF00156 Phosphoribosyl transferase domain NO935_08255 PF01048 Phosphorylase superfamily NO935_08260 PF00313 'Cold-shock' DNA-binding domain NO935_08265 PF01494 FAD binding domain NO935_08270 PF01494 FAD binding domain NO935_08285 PF00270 DEAD/DEAH box helicase NO935_08285 PF08494 DEAD/H associated NO935_08285 PF00271 Helicase conserved C-terminal domain NO935_08290 PF01068 ATP dependent DNA ligase domain NO935_08290 PF04675 DNA ligase N terminus NO935_08290 PF04679 ATP dependent DNA ligase C terminal region NO935_08300 PF04675 DNA ligase N terminus NO935_08300 PF01068 ATP dependent DNA ligase domain NO935_08300 PF04679 ATP dependent DNA ligase C terminal region NO935_08315 PF00990 Diguanylate cyclase, GGDEF domain NO935_08315 PF00072 Response regulator receiver domain NO935_08330 PF02803 Thiolase, C-terminal domain NO935_08330 PF00108 Thiolase, N-terminal domain NO935_08335 PF00082 Subtilase family NO935_08335 PF12951 Passenger-associated-transport-repeat NO935_08335 PF03797 Autotransporter beta-domain NO935_08340 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NO935_08340 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NO935_08350 PF01863 Protein of unknown function DUF45 NO935_08355 PF07043 Protein of unknown function (DUF1328) NO935_08365 PF01258 Prokaryotic dksA/traR C4-type zinc finger NO935_08375 PF01609 Transposase DDE domain NO935_08375 PF05598 Transposase domain (DUF772) NO935_08410 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NO935_08430 PF03831 PhnA domain NO935_08430 PF08274 PhnA Zinc-Ribbon NO935_08440 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NO935_08445 PF07690 Major Facilitator Superfamily NO935_08480 PF09924 Uncharacterised conserved protein (DUF2156) NO935_08480 PF03706 Lysylphosphatidylglycerol synthase TM region NO935_08490 PF01042 Endoribonuclease L-PSP NO935_08535 PF04545 Sigma-70, region 4 NO935_08535 PF04542 Sigma-70 region 2 NO935_08550 PF04060 Putative Fe-S cluster NO935_08560 PF01588 Putative tRNA binding domain NO935_08560 PF09334 tRNA synthetases class I (M) NO935_08580 PF00324 Amino acid permease NO935_08585 PF02574 Homocysteine S-methyltransferase NO935_08605 PF02592 Putative vitamin uptake transporter NO935_08625 PF05598 Transposase domain (DUF772) NO935_08645 PF00009 Elongation factor Tu GTP binding domain NO935_08690 PF03653 Uncharacterised protein family (UPF0093) NO935_08715 PF00005 ABC transporter NO935_08720 PF07715 TonB-dependent Receptor Plug Domain NO935_08720 PF00593 TonB dependent receptor NO935_08730 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit NO935_08735 PF07733 Bacterial DNA polymerase III alpha NTPase domain NO935_08735 PF02811 PHP domain NO935_08735 PF01336 OB-fold nucleic acid binding domain NO935_08735 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NO935_08735 PF14579 Helix-hairpin-helix motif NO935_08740 PF01351 Ribonuclease HII NO935_08745 PF02684 Lipid-A-disaccharide synthetase NO935_08750 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 NO935_08750 PF00132 Bacterial transferase hexapeptide (six repeats) NO935_08755 PF07977 FabA-like domain NO935_08760 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD NO935_08760 PF00132 Bacterial transferase hexapeptide (six repeats) NO935_08775 PF07244 Surface antigen variable number repeat NO935_08775 PF01103 Surface antigen NO935_08780 PF02163 Peptidase family M50 NO935_08780 PF17820 PDZ domain NO935_08785 PF13288 DXP reductoisomerase C-terminal domain NO935_08785 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain NO935_08785 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase NO935_08795 PF01255 Putative undecaprenyl diphosphate synthase NO935_08800 PF01765 Ribosome recycling factor NO935_08805 PF00696 Amino acid kinase family NO935_08815 PF00889 Elongation factor TS NO935_08820 PF00318 Ribosomal protein S2 NO935_08855 PF00557 Metallopeptidase family M24 NO935_08860 PF01966 HD domain NO935_08860 PF01909 Nucleotidyltransferase domain NO935_08860 PF08335 GlnD PII-uridylyltransferase NO935_08865 PF00132 Bacterial transferase hexapeptide (six repeats) NO935_08865 PF14602 Hexapeptide repeat of succinyl-transferase NO935_08865 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal NO935_08875 PF03960 ArsC family NO935_08885 PF07687 Peptidase dimerisation domain NO935_08885 PF01546 Peptidase family M20/M25/M40 NO935_08890 PF13537 Glutamine amidotransferase domain NO935_08890 PF00733 Asparagine synthase NO935_08900 PF00593 TonB dependent receptor NO935_08900 PF07715 TonB-dependent Receptor Plug Domain NO935_08910 PF01804 Penicillin amidase NO935_08915 PF00210 Ferritin-like domain NO935_08920 PF03989 DNA gyrase C-terminal domain, beta-propeller NO935_08920 PF00521 DNA gyrase/topoisomerase IV, subunit A NO935_08925 PF12833 Helix-turn-helix domain NO935_08935 PF02321 Outer membrane efflux protein NO935_08940 PF00529 HlyD membrane-fusion protein of T1SS NO935_08940 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NO935_08945 PF07690 Major Facilitator Superfamily NO935_08990 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NO935_08990 PF02779 Transketolase, pyrimidine binding domain NO935_08990 PF02780 Transketolase, C-terminal domain NO935_09000 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NO935_09000 PF02770 Acyl-CoA dehydrogenase, middle domain NO935_09000 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NO935_09000 PF12806 Acetyl-CoA dehydrogenase C-terminal like NO935_09015 PF01668 SmpB protein NO935_09020 PF03364 Polyketide cyclase / dehydrase and lipid transport NO935_09025 PF03658 RnfH family Ubiquitin NO935_09030 PF04355 SmpA / OmlA family NO935_09035 PF01475 Ferric uptake regulator family NO935_09040 PF02463 RecF/RecN/SMC N terminal domain NO935_09045 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding NO935_09045 PF01628 HrcA protein C terminal domain NO935_09050 PF01025 GrpE NO935_09055 PF00012 Hsp70 protein NO935_09060 PF00684 DnaJ central domain NO935_09060 PF01556 DnaJ C terminal domain NO935_09060 PF00226 DnaJ domain NO935_09065 PF08543 Phosphomethylpyrimidine kinase NO935_09070 PF02153 Prephenate dehydrogenase NO935_09070 PF01817 Chorismate mutase type II NO935_09095 PF00664 ABC transporter transmembrane region NO935_09095 PF00005 ABC transporter NO935_09100 PF01205 Uncharacterized protein family UPF0029 NO935_09105 PF03641 Possible lysine decarboxylase NO935_09110 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NO935_09110 PF07992 Pyridine nucleotide-disulphide oxidoreductase NO935_09115 PF02817 e3 binding domain NO935_09115 PF00364 Biotin-requiring enzyme NO935_09115 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NO935_09120 PF02779 Transketolase, pyrimidine binding domain NO935_09120 PF00676 Dehydrogenase E1 component NO935_09120 PF16078 2-oxoglutarate dehydrogenase N-terminus NO935_09120 PF16870 2-oxoglutarate dehydrogenase C-terminal NO935_09130 PF08007 Cupin superfamily protein NO935_09150 PF00206 Lyase NO935_09150 PF08328 Adenylosuccinate lyase C-terminal NO935_09180 PF10415 Fumarase C C-terminus NO935_09180 PF00206 Lyase NO935_09210 PF00005 ABC transporter NO935_09215 PF00392 Bacterial regulatory proteins, gntR family NO935_09225 PF00255 Glutathione peroxidase NO935_09235 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NO935_09235 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NO935_09240 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NO935_09240 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NO935_09240 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NO935_09245 PF04102 SlyX NO935_09260 PF00356 Bacterial regulatory proteins, lacI family NO935_09265 PF07690 Major Facilitator Superfamily NO935_09270 PF00294 pfkB family carbohydrate kinase NO935_09280 PF02965 Vitamin B12 dependent methionine synthase, activation domain NO935_09280 PF02574 Homocysteine S-methyltransferase NO935_09280 PF00809 Pterin binding enzyme NO935_09280 PF02607 B12 binding domain NO935_09280 PF02310 B12 binding domain NO935_09285 PF02574 Homocysteine S-methyltransferase NO935_09285 PF00809 Pterin binding enzyme NO935_09290 PF01209 ubiE/COQ5 methyltransferase family NO935_09295 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NO935_09295 PF02770 Acyl-CoA dehydrogenase, middle domain NO935_09295 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NO935_09320 PF00773 RNB domain NO935_09320 PF17876 Cold shock domain NO935_09320 PF00575 S1 RNA binding domain NO935_09320 PF08206 Ribonuclease B OB domain NO935_09320 PF08461 Ribonuclease R winged-helix domain NO935_09335 PF00588 SpoU rRNA Methylase family NO935_09335 PF08032 RNA 2'-O ribose methyltransferase substrate binding NO935_09345 PF05598 Transposase domain (DUF772) NO935_09345 PF01609 Transposase DDE domain NO935_09370 PF00872 Transposase, Mutator family NO935_09385 PF00561 alpha/beta hydrolase fold NO935_09435 PF03544 Gram-negative bacterial TonB protein C-terminal NO935_09440 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NO935_09440 PF02403 Seryl-tRNA synthetase N-terminal domain NO935_09460 PF05598 Transposase domain (DUF772) NO935_09460 PF01609 Transposase DDE domain NO935_09465 PF02525 Flavodoxin-like fold NO935_09470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NO935_09470 PF03466 LysR substrate binding domain NO935_09490 PF03377 TAL effector repeat NO935_09530 PF05593 RHS Repeat NO935_09530 PF03527 RHS protein NO935_09565 PF01627 Hpt domain NO935_09565 PF00072 Response regulator receiver domain NO935_09565 PF01584 CheW-like domain NO935_09565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NO935_09565 PF02895 Signal transducing histidine kinase, homodimeric domain NO935_09570 PF04344 Chemotaxis phosphatase, CheZ NO935_09575 PF00072 Response regulator receiver domain NO935_09580 PF04542 Sigma-70 region 2 NO935_09580 PF04539 Sigma-70 region 3 NO935_09580 PF04545 Sigma-70, region 4 NO935_09585 PF10609 NUBPL iron-transfer P-loop NTPase NO935_09590 PF00448 SRP54-type protein, GTPase domain NO935_09595 PF00771 FHIPEP family NO935_09600 PF01312 FlhB HrpN YscU SpaS Family NO935_09605 PF00990 Diguanylate cyclase, GGDEF domain NO935_09605 PF03707 Bacterial signalling protein N terminal repeat NO935_09605 PF00563 EAL domain NO935_09610 PF00990 Diguanylate cyclase, GGDEF domain NO935_09615 PF00990 Diguanylate cyclase, GGDEF domain NO935_09620 PF01311 Bacterial export proteins, family 1 NO935_09625 PF01313 Bacterial export proteins, family 3 NO935_09630 PF00813 FliP family NO935_09635 PF04347 Flagellar biosynthesis protein, FliO NO935_09640 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NO935_09645 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NO935_09645 PF02154 Flagellar motor switch protein FliM NO935_09665 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NO935_09665 PF18269 T3SS EscN ATPase C-terminal domain NO935_09675 PF14842 FliG N-terminal domain NO935_09675 PF01706 FliG C-terminal domain NO935_09675 PF14841 FliG middle domain NO935_09680 PF01514 Secretory protein of YscJ/FliF family NO935_09680 PF08345 Flagellar M-ring protein C-terminal NO935_09685 PF02049 Flagellar hook-basal body complex protein FliE NO935_09690 PF00534 Glycosyl transferases group 1 NO935_09690 PF00535 Glycosyl transferase family 2 NO935_09725 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NO935_09725 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NO935_09735 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NO935_09740 PF06490 Flagellar regulatory protein FleQ NO935_09740 PF02954 Bacterial regulatory protein, Fis family NO935_09740 PF00158 Sigma-54 interaction domain NO935_09745 PF01339 CheB methylesterase NO935_09745 PF00072 Response regulator receiver domain NO935_09750 PF00309 Sigma-54 factor, Activator interacting domain (AID) NO935_09750 PF04963 Sigma-54 factor, core binding domain NO935_09750 PF04552 Sigma-54, DNA binding domain NO935_09755 PF00196 Bacterial regulatory proteins, luxR family NO935_09755 PF00072 Response regulator receiver domain NO935_09775 PF02561 Flagellar protein FliS NO935_09780 PF02465 Flagellar hook-associated protein 2 N-terminus NO935_09780 PF07195 Flagellar hook-associated protein 2 C-terminus NO935_09780 PF07196 Flagellin hook IN motif NO935_09785 PF00700 Bacterial flagellin C-terminal helical region NO935_09785 PF00669 Bacterial flagellin N-terminal helical region NO935_09795 PF07196 Flagellin hook IN motif NO935_09795 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NO935_09800 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase NO935_09800 PF10135 Rod binding protein NO935_09805 PF02119 Flagellar P-ring protein NO935_09810 PF02107 Flagellar L-ring protein NO935_09815 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NO935_09815 PF00460 Flagella basal body rod protein NO935_09820 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NO935_09820 PF00460 Flagella basal body rod protein NO935_09825 PF07559 Flagellar basal body protein FlaE NO935_09825 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NO935_09825 PF00460 Flagella basal body rod protein NO935_09830 PF03963 Flagellar hook capping protein - N-terminal region NO935_09835 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NO935_09835 PF00460 Flagella basal body rod protein NO935_09845 PF01584 CheW-like domain NO935_09845 PF00072 Response regulator receiver domain NO935_09865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NO935_09865 PF00989 PAS fold NO935_09865 PF13188 PAS domain NO935_09865 PF13426 PAS domain NO935_09865 PF00512 His Kinase A (phospho-acceptor) domain NO935_09870 PF00563 EAL domain NO935_09870 PF00990 Diguanylate cyclase, GGDEF domain NO935_09870 PF03707 Bacterial signalling protein N terminal repeat NO935_09875 PF07730 Histidine kinase NO935_09875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NO935_09880 PF08448 PAS fold NO935_09880 PF08447 PAS fold NO935_09880 PF00990 Diguanylate cyclase, GGDEF domain NO935_09880 PF00563 EAL domain NO935_09895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NO935_09895 PF12729 Four helix bundle sensory module for signal transduction NO935_09895 PF00672 HAMP domain NO935_09900 PF04356 Protein of unknown function (DUF489) NO935_09910 PF00293 NUDIX domain NO935_09915 PF02617 ATP-dependent Clp protease adaptor protein ClpS NO935_09920 PF17871 AAA lid domain NO935_09920 PF02861 Clp amino terminal domain, pathogenicity island component NO935_09920 PF10431 C-terminal, D2-small domain, of ClpB protein NO935_09920 PF00004 ATPase family associated with various cellular activities (AAA) NO935_09920 PF07724 AAA domain (Cdc48 subfamily) NO935_09925 PF01176 Translation initiation factor 1A / IF-1 NO935_09930 PF03588 Leucyl/phenylalanyl-tRNA protein transferase NO935_09955 PF07992 Pyridine nucleotide-disulphide oxidoreductase NO935_09960 PF13491 4TM region of DNA translocase FtsK/SpoIIIE NO935_09960 PF17854 FtsK alpha domain NO935_09960 PF09397 Ftsk gamma domain NO935_09960 PF01580 FtsK/SpoIIIE family NO935_09970 PF03548 Outer membrane lipoprotein carrier protein LolA NO935_09980 PF00004 ATPase family associated with various cellular activities (AAA) NO935_09980 PF12002 MgsA AAA+ ATPase C terminal NO935_09980 PF16193 AAA C-terminal domain NO935_09990 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NO935_10000 PF00654 Voltage gated chloride channel NO935_10005 PF00108 Thiolase, N-terminal domain NO935_10005 PF02803 Thiolase, C-terminal domain NO935_10010 PF00378 Enoyl-CoA hydratase/isomerase NO935_10010 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NO935_10010 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NO935_10020 PF00334 Nucleoside diphosphate kinase NO935_10025 PF04055 Radical SAM superfamily NO935_10035 PF13464 Domain of unknown function (DUF4115) NO935_10045 PF13360 PQQ-like domain NO935_10045 PF01011 PQQ enzyme repeat NO935_10050 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NO935_10050 PF01926 50S ribosome-binding GTPase NO935_10055 PF00994 Probable molybdopterin binding domain NO935_10055 PF03454 MoeA C-terminal region (domain IV) NO935_10055 PF03453 MoeA N-terminal region (domain I and II) NO935_10125 PF00899 ThiF family NO935_10135 PF05598 Transposase domain (DUF772) NO935_10135 PF01609 Transposase DDE domain NO935_10170 PF03079 ARD/ARD' family NO935_10175 PF00596 Class II Aldolase and Adducin N-terminal domain NO935_10180 PF13520 Amino acid permease NO935_10185 PF13520 Amino acid permease NO935_10195 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NO935_10195 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NO935_10200 PF01565 FAD binding domain NO935_10200 PF02913 FAD linked oxidases, C-terminal domain NO935_10225 PF03918 Cytochrome C biogenesis protein NO935_10230 PF08534 Redoxin NO935_10235 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal NO935_10235 PF01578 Cytochrome C assembly protein NO935_10240 PF03100 CcmE NO935_10250 PF01578 Cytochrome C assembly protein NO935_10255 PF03379 CcmB protein NO935_10260 PF00005 ABC transporter NO935_10265 PF00155 Aminotransferase class I and II NO935_10270 PF00795 Carbon-nitrogen hydrolase NO935_10290 PF00849 RNA pseudouridylate synthase NO935_10290 PF01479 S4 domain NO935_10295 PF04079 Segregation and condensation complex subunit ScpB NO935_10300 PF02616 Segregation and condensation protein ScpA NO935_10305 PF03795 YCII-related domain NO935_10335 PF00528 Binding-protein-dependent transport system inner membrane component NO935_10340 PF00528 Binding-protein-dependent transport system inner membrane component NO935_10365 PF00795 Carbon-nitrogen hydrolase NO935_10375 PF04371 Porphyromonas-type peptidyl-arginine deiminase NO935_10385 PF00444 Ribosomal protein L36 NO935_10390 PF02224 Cytidylate kinase NO935_10395 PF00575 S1 RNA binding domain NO935_10400 PF00216 Bacterial DNA-binding protein NO935_10410 PF18073 Rubredoxin metal binding domain NO935_10415 PF00953 Glycosyl transferase family 4 NO935_10420 PF02719 Polysaccharide biosynthesis protein NO935_10425 PF00483 Nucleotidyl transferase NO935_10445 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NO935_10445 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NO935_10450 PF00571 CBS domain NO935_10450 PF00478 IMP dehydrogenase / GMP reductase domain NO935_10455 PF00117 Glutamine amidotransferase class-I NO935_10455 PF00958 GMP synthase C terminal domain NO935_10455 PF02540 NAD synthase NO935_10460 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) NO935_10465 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NO935_10465 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus NO935_10465 PF00361 Proton-conducting membrane transporter NO935_10470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NO935_10470 PF03466 LysR substrate binding domain NO935_10495 PF03601 Conserved hypothetical protein 698 NO935_10520 PF01566 Natural resistance-associated macrophage protein NO935_10525 PF02742 Iron dependent repressor, metal binding and dimerisation domain NO935_10525 PF01325 Iron dependent repressor, N-terminal DNA binding domain NO935_10530 PF14437 MafB19-like deaminase NO935_10535 PF00929 Exonuclease NO935_10540 PF00924 Mechanosensitive ion channel NO935_10540 PF05552 Conserved TM helix NO935_10545 PF02896 PEP-utilising enzyme, TIM barrel domain NO935_10545 PF00391 PEP-utilising enzyme, mobile domain NO935_10545 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NO935_10550 PF03618 Kinase/pyrophosphorylase NO935_10580 PF01609 Transposase DDE domain NO935_10580 PF05598 Transposase domain (DUF772) NO935_10595 PF01066 CDP-alcohol phosphatidyltransferase NO935_10605 PF00561 alpha/beta hydrolase fold NO935_10620 PF01266 FAD dependent oxidoreductase NO935_10620 PF00355 Rieske [2Fe-2S] domain NO935_10630 PF17674 HHH domain NO935_10630 PF00575 S1 RNA binding domain NO935_10630 PF09371 Tex-like protein N-terminal domain NO935_10630 PF16921 Tex protein YqgF-like domain NO935_10645 PF00072 Response regulator receiver domain NO935_10655 PF04551 GcpE protein NO935_10660 PF01569 PAP2 superfamily NO935_10685 PF00892 EamA-like transporter family NO935_10690 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain NO935_10690 PF01565 FAD binding domain NO935_10695 PF01180 Dihydroorotate dehydrogenase NO935_10715 PF00171 Aldehyde dehydrogenase family NO935_10730 PF00742 Homoserine dehydrogenase NO935_10730 PF13840 ACT domain NO935_10730 PF01842 ACT domain NO935_10730 PF03447 Homoserine dehydrogenase, NAD binding domain NO935_10730 PF00696 Amino acid kinase family NO935_10735 PF08544 GHMP kinases C terminal NO935_10735 PF00288 GHMP kinases N terminal domain NO935_10750 PF00291 Pyridoxal-phosphate dependent enzyme NO935_10750 PF14821 Threonine synthase N terminus NO935_10765 PF13393 Histidyl-tRNA synthetase NO935_10765 PF03129 Anticodon binding domain NO935_10795 PF01634 ATP phosphoribosyltransferase NO935_10795 PF08029 HisG, C-terminal domain NO935_10800 PF00815 Histidinol dehydrogenase NO935_10805 PF00155 Aminotransferase class I and II NO935_10810 PF00475 Imidazoleglycerol-phosphate dehydratase NO935_10815 PF00117 Glutamine amidotransferase class-I NO935_10820 PF00977 Histidine biosynthesis protein NO935_10825 PF00977 Histidine biosynthesis protein NO935_10830 PF01502 Phosphoribosyl-AMP cyclohydrolase NO935_10830 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase NO935_10840 PF03377 TAL effector repeat NO935_10855 PF03377 TAL effector repeat NO935_10985 PF03377 TAL effector repeat NO935_11000 PF03377 TAL effector repeat NO935_11030 PF00872 Transposase, Mutator family NO935_11040 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NO935_11060 PF01066 CDP-alcohol phosphatidyltransferase NO935_11065 PF01541 GIY-YIG catalytic domain NO935_11065 PF02151 UvrB/uvrC motif NO935_11065 PF08459 UvrC Helix-hairpin-helix N-terminal NO935_11075 PF01451 Low molecular weight phosphotyrosine protein phosphatase NO935_11080 PF02348 Cytidylyltransferase NO935_11085 PF02606 Tetraacyldisaccharide-1-P 4'-kinase NO935_11090 PF00664 ABC transporter transmembrane region NO935_11090 PF00005 ABC transporter NO935_11100 PF01618 MotA/TolQ/ExbB proton channel family NO935_11120 PF00005 ABC transporter NO935_11125 PF02687 FtsX-like permease family NO935_11125 PF12704 MacB-like periplasmic core domain NO935_11135 PF03937 Flavinator of succinate dehydrogenase NO935_11140 PF13085 2Fe-2S iron-sulfur cluster binding domain NO935_11150 PF00890 FAD binding domain NO935_11150 PF02910 Fumarate reductase flavoprotein C-term NO935_11155 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NO935_11160 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NO935_11170 PF01571 Aminomethyltransferase folate-binding domain NO935_11180 PF17912 MalK OB fold domain NO935_11180 PF00005 ABC transporter NO935_11185 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain NO935_11185 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain NO935_11190 PF02685 Glucokinase NO935_11195 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NO935_11200 PF00920 Dehydratase family NO935_11205 PF01081 KDPG and KHG aldolase NO935_11245 PF00672 HAMP domain NO935_11245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NO935_11245 PF00512 His Kinase A (phospho-acceptor) domain NO935_11245 PF01627 Hpt domain NO935_11245 PF00072 Response regulator receiver domain NO935_11245 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NO935_11260 PF01526 Tn3 transposase DDE domain NO935_11260 PF13700 Domain of unknown function (DUF4158) NO935_11270 PF00581 Rhodanese-like domain NO935_11275 PF02040 Arsenical pump membrane protein NO935_11280 PF03358 NADPH-dependent FMN reductase NO935_11285 PF03960 ArsC family NO935_11290 PF01451 Low molecular weight phosphotyrosine protein phosphatase NO935_11310 PF13175 AAA ATPase domain NO935_11335 PF05598 Transposase domain (DUF772) NO935_11335 PF01609 Transposase DDE domain NO935_11345 PF00004 ATPase family associated with various cellular activities (AAA) NO935_11345 PF17862 AAA+ lid domain NO935_11345 PF06480 FtsH Extracellular NO935_11345 PF01434 Peptidase family M41 NO935_11390 PF00990 Diguanylate cyclase, GGDEF domain NO935_11415 PF02253 Phospholipase A1 NO935_11430 PF05681 Fumarate hydratase (Fumerase) NO935_11430 PF05683 Fumarase C-terminus NO935_11435 PF00005 ABC transporter NO935_11440 PF00970 Oxidoreductase FAD-binding domain NO935_11440 PF00175 Oxidoreductase NAD-binding domain NO935_11445 PF00255 Glutathione peroxidase NO935_11465 PF00082 Subtilase family NO935_11470 PF04542 Sigma-70 region 2 NO935_11470 PF08281 Sigma-70, region 4 NO935_11480 PF12802 MarR family NO935_11515 PF14310 Fibronectin type III-like domain NO935_11515 PF00933 Glycosyl hydrolase family 3 N terminal domain NO935_11515 PF01915 Glycosyl hydrolase family 3 C-terminal domain NO935_11530 PF01590 GAF domain NO935_11530 PF00360 Phytochrome region NO935_11530 PF00990 Diguanylate cyclase, GGDEF domain NO935_11530 PF00563 EAL domain NO935_11540 PF00474 Sodium:solute symporter family NO935_11545 PF00933 Glycosyl hydrolase family 3 N terminal domain NO935_11545 PF14310 Fibronectin type III-like domain NO935_11545 PF01915 Glycosyl hydrolase family 3 C-terminal domain NO935_11565 PF00342 Phosphoglucose isomerase NO935_11570 PF02261 Aspartate decarboxylase NO935_11575 PF02569 Pantoate-beta-alanine ligase NO935_11580 PF02548 Ketopantoate hydroxymethyltransferase NO935_11585 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NO935_11590 PF01743 Poly A polymerase head domain NO935_11590 PF12626 Polymerase A arginine-rich C-terminus NO935_11590 PF12627 Probable RNA and SrmB- binding site of polymerase A NO935_11600 PF02649 Type I GTP cyclohydrolase folE2 NO935_11605 PF01520 N-acetylmuramoyl-L-alanine amidase NO935_11620 PF05598 Transposase domain (DUF772) NO935_11625 PF03797 Autotransporter beta-domain NO935_11625 PF00082 Subtilase family NO935_11630 PF13533 Biotin-lipoyl like NO935_11635 PF00873 AcrB/AcrD/AcrF family NO935_11640 PF02321 Outer membrane efflux protein NO935_11645 PF00512 His Kinase A (phospho-acceptor) domain NO935_11645 PF08448 PAS fold NO935_11645 PF13426 PAS domain NO935_11645 PF00072 Response regulator receiver domain NO935_11645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NO935_11650 PF00072 Response regulator receiver domain NO935_11650 PF00196 Bacterial regulatory proteins, luxR family NO935_11655 PF12951 Passenger-associated-transport-repeat NO935_11680 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NO935_11685 PF01842 ACT domain NO935_11685 PF01817 Chorismate mutase type II NO935_11685 PF00800 Prephenate dehydratase NO935_11690 PF00266 Aminotransferase class-V NO935_11695 PF00174 Oxidoreductase molybdopterin binding domain NO935_11700 PF01794 Ferric reductase like transmembrane component NO935_11725 PF07702 UTRA domain NO935_11725 PF00392 Bacterial regulatory proteins, gntR family NO935_11735 PF07969 Amidohydrolase family NO935_11740 PF00221 Aromatic amino acid lyase NO935_11750 PF17391 Urocanase N-terminal domain NO935_11750 PF17392 Urocanase C-terminal domain NO935_11750 PF01175 Urocanase Rossmann-like domain NO935_11770 PF03989 DNA gyrase C-terminal domain, beta-propeller NO935_11770 PF00521 DNA gyrase/topoisomerase IV, subunit A NO935_11775 PF01008 Initiation factor 2 subunit family NO935_11790 PF00152 tRNA synthetases class II (D, K and N) NO935_11795 PF00533 BRCA1 C Terminus (BRCT) domain NO935_11795 PF01653 NAD-dependent DNA ligase adenylation domain NO935_11795 PF03119 NAD-dependent DNA ligase C4 zinc finger domain NO935_11795 PF12826 Helix-hairpin-helix motif NO935_11795 PF03120 NAD-dependent DNA ligase OB-fold domain NO935_11810 PF04354 ZipA, C-terminal FtsZ-binding domain NO935_11815 PF02463 RecF/RecN/SMC N terminal domain NO935_11820 PF03948 Ribosomal protein L9, C-terminal domain NO935_11820 PF01281 Ribosomal protein L9, N-terminal domain NO935_11825 PF01084 Ribosomal protein S18 NO935_11830 PF01250 Ribosomal protein S6 NO935_11835 PF01521 Iron-sulphur cluster biosynthesis NO935_11840 PF00152 tRNA synthetases class II (D, K and N) NO935_11840 PF01336 OB-fold nucleic acid binding domain NO935_11865 PF05598 Transposase domain (DUF772) NO935_11865 PF01609 Transposase DDE domain NO935_11875 PF00484 Carbonic anhydrase NO935_11880 PF06052 3-hydroxyanthranilic acid dioxygenase NO935_11890 PF00266 Aminotransferase class-V NO935_11895 PF01494 FAD binding domain NO935_11900 PF08411 Exonuclease C-terminal NO935_11900 PF00929 Exonuclease NO935_11910 PF00248 Aldo/keto reductase family NO935_11925 PF01513 ATP-NAD kinase NO935_11935 PF02926 THUMP domain NO935_11935 PF01170 Putative RNA methylase family UPF0020 NO935_11935 PF10672 S-adenosylmethionine-dependent methyltransferase NO935_11975 PF00581 Rhodanese-like domain NO935_11980 PF00293 NUDIX domain NO935_11990 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NO935_11990 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NO935_11995 PF00378 Enoyl-CoA hydratase/isomerase NO935_12005 PF00633 Helix-hairpin-helix motif NO935_12005 PF10576 Iron-sulfur binding domain of endonuclease III NO935_12005 PF00730 HhH-GPD superfamily base excision DNA repair protein NO935_12035 PF12849 PBP superfamily domain NO935_12040 PF12849 PBP superfamily domain NO935_12045 PF00528 Binding-protein-dependent transport system inner membrane component NO935_12050 PF00528 Binding-protein-dependent transport system inner membrane component NO935_12055 PF00005 ABC transporter NO935_12060 PF01895 PhoU domain NO935_12070 PF00929 Exonuclease NO935_12105 PF05598 Transposase domain (DUF772) NO935_12105 PF01609 Transposase DDE domain NO935_12110 PF00589 Phage integrase family NO935_12110 PF13495 Phage integrase, N-terminal SAM-like domain NO935_12115 PF07549 SecD/SecF GG Motif NO935_12115 PF02355 Protein export membrane protein NO935_12120 PF07549 SecD/SecF GG Motif NO935_12120 PF13721 SecD export protein N-terminal TM region NO935_12120 PF02355 Protein export membrane protein NO935_12125 PF02699 Preprotein translocase subunit NO935_12130 PF01702 Queuine tRNA-ribosyltransferase NO935_12135 PF02547 Queuosine biosynthesis protein NO935_12165 PF05598 Transposase domain (DUF772) NO935_12165 PF01609 Transposase DDE domain NO935_12220 PF00037 4Fe-4S binding domain NO935_12230 PF01467 Cytidylyltransferase-like NO935_12240 PF00183 Hsp90 protein NO935_12240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NO935_12255 PF03377 TAL effector repeat NO935_12265 PF03150 Di-haem cytochrome c peroxidase NO935_12295 PF00034 Cytochrome c NO935_12340 PF00664 ABC transporter transmembrane region NO935_12340 PF00005 ABC transporter NO935_12345 PF00664 ABC transporter transmembrane region NO935_12345 PF00005 ABC transporter NO935_12375 PF02129 X-Pro dipeptidyl-peptidase (S15 family) NO935_12375 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain NO935_12380 PF00171 Aldehyde dehydrogenase family NO935_12385 PF00696 Amino acid kinase family NO935_12385 PF01472 PUA domain NO935_12400 PF00206 Lyase NO935_12405 PF01118 Semialdehyde dehydrogenase, NAD binding domain NO935_12415 PF00696 Amino acid kinase family NO935_12415 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase NO935_12420 PF07687 Peptidase dimerisation domain NO935_12420 PF01546 Peptidase family M20/M25/M40 NO935_12430 PF00764 Arginosuccinate synthase NO935_12435 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NO935_12435 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NO935_12445 PF09190 DALR domain NO935_12445 PF01406 tRNA synthetases class I (C) catalytic domain NO935_12450 PF02657 Fe-S metabolism associated domain NO935_12465 PF01258 Prokaryotic dksA/traR C4-type zinc finger NO935_12475 PF01809 Putative membrane protein insertion efficiency factor NO935_12480 PF01979 Amidohydrolase family NO935_12485 PF01551 Peptidase family M23 NO935_12485 PF08460 Bacterial SH3 domain NO935_12510 PF01609 Transposase DDE domain NO935_12510 PF05598 Transposase domain (DUF772) NO935_12530 PF01095 Pectinesterase NO935_12545 PF00295 Glycosyl hydrolases family 28 NO935_12555 PF13419 Haloacid dehalogenase-like hydrolase NO935_12565 PF01979 Amidohydrolase family NO935_12575 PF01132 Elongation factor P (EF-P) OB domain NO935_12575 PF08207 Elongation factor P (EF-P) KOW-like domain NO935_12575 PF09285 Elongation factor P, C-terminal NO935_12580 PF04055 Radical SAM superfamily NO935_12585 PF03707 Bacterial signalling protein N terminal repeat NO935_12585 PF00990 Diguanylate cyclase, GGDEF domain NO935_12585 PF13188 PAS domain NO935_12585 PF00563 EAL domain NO935_12595 PF00588 SpoU rRNA Methylase family NO935_12600 PF00459 Inositol monophosphatase family NO935_12605 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NO935_12605 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NO935_12610 PF00545 ribonuclease NO935_12625 PF00005 ABC transporter NO935_12625 PF16326 ABC transporter C-terminal domain NO935_12625 PF12848 ABC transporter NO935_12630 PF03880 DbpA RNA binding domain NO935_12630 PF00270 DEAD/DEAH box helicase NO935_12630 PF00271 Helicase conserved C-terminal domain NO935_12635 PF00156 Phosphoribosyl transferase domain NO935_12640 PF02696 Uncharacterized ACR, YdiU/UPF0061 family NO935_12650 PF02798 Glutathione S-transferase, N-terminal domain NO935_12650 PF14497 Glutathione S-transferase, C-terminal domain NO935_12655 PF00313 'Cold-shock' DNA-binding domain NO935_12660 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 NO935_12665 PF07152 YaeQ protein NO935_12675 PF00563 EAL domain NO935_12675 PF00990 Diguanylate cyclase, GGDEF domain NO935_12675 PF00072 Response regulator receiver domain NO935_12680 PF01435 Peptidase family M48 NO935_12685 PF00749 tRNA synthetases class I (E and Q), catalytic domain NO935_12690 PF00106 short chain dehydrogenase NO935_12695 PF07879 PHB/PHA accumulation regulator DNA-binding domain NO935_12695 PF05233 PHB accumulation regulatory domain NO935_12710 PF01119 DNA mismatch repair protein, C-terminal domain NO935_12710 PF08676 MutL C terminal dimerisation domain NO935_12715 PF01520 N-acetylmuramoyl-L-alanine amidase NO935_12715 PF11741 AMIN domain NO935_12720 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE NO935_12725 PF03853 YjeF-related protein N-terminus NO935_12725 PF01256 Carbohydrate kinase NO935_12730 PF08331 Domain of unknown function (DUF1730) NO935_12735 PF13742 OB-fold nucleic acid binding domain NO935_12735 PF02601 Exonuclease VII, large subunit NO935_12750 PF03781 Sulfatase-modifying factor enzyme 1 NO935_12760 PF00570 HRDC domain NO935_12760 PF01612 3'-5' exonuclease NO935_12820 PF14850 DNA-binding domain of Proline dehydrogenase NO935_12820 PF00171 Aldehyde dehydrogenase family NO935_12820 PF18327 Proline utilization A proline dehydrogenase N-terminal domain NO935_12820 PF01619 Proline dehydrogenase NO935_12830 PF01609 Transposase DDE domain NO935_12830 PF05598 Transposase domain (DUF772) NO935_12845 PF02245 Methylpurine-DNA glycosylase (MPG) NO935_12870 PF04386 Stringent starvation protein B NO935_12875 PF00043 Glutathione S-transferase, C-terminal domain NO935_12875 PF02798 Glutathione S-transferase, N-terminal domain NO935_12880 PF02167 Cytochrome C1 family NO935_12885 PF00033 Cytochrome b/b6/petB NO935_12885 PF00032 Cytochrome b(C-terminal)/b6/petD NO935_12890 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal NO935_12890 PF00355 Rieske [2Fe-2S] domain NO935_12895 PF01464 Transglycosylase SLT domain NO935_12915 PF04055 Radical SAM superfamily NO935_12915 PF00919 Uncharacterized protein family UPF0004 NO935_12915 PF01938 TRAM domain NO935_12920 PF02562 PhoH-like protein NO935_12930 PF02130 Uncharacterized protein family UPF0054 NO935_12940 PF03471 Transporter associated domain NO935_12940 PF00571 CBS domain NO935_12955 PF00171 Aldehyde dehydrogenase family NO935_12975 PF00005 ABC transporter NO935_12975 PF08402 TOBE domain NO935_12980 PF02321 Outer membrane efflux protein NO935_12985 PF07690 Major Facilitator Superfamily NO935_12990 PF13533 Biotin-lipoyl like NO935_13000 PF00120 Glutamine synthetase, catalytic domain NO935_13010 PF00120 Glutamine synthetase, catalytic domain NO935_13015 PF01266 FAD dependent oxidoreductase NO935_13020 PF00072 Response regulator receiver domain NO935_13020 PF00990 Diguanylate cyclase, GGDEF domain NO935_13025 PF00083 Sugar (and other) transporter NO935_13025 PF07690 Major Facilitator Superfamily NO935_13035 PF00384 Molybdopterin oxidoreductase NO935_13040 PF02634 FdhD/NarQ family NO935_13045 PF07690 Major Facilitator Superfamily NO935_13050 PF00202 Aminotransferase class-III NO935_13055 PF00005 ABC transporter NO935_13065 PF04286 Protein of unknown function (DUF445) NO935_13070 PF00672 HAMP domain NO935_13070 PF01627 Hpt domain NO935_13070 PF00072 Response regulator receiver domain NO935_13070 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NO935_13070 PF00512 His Kinase A (phospho-acceptor) domain NO935_13070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NO935_13075 PF00072 Response regulator receiver domain NO935_13100 PF01609 Transposase DDE domain NO935_13100 PF05598 Transposase domain (DUF772) NO935_13105 PF05088 Bacterial NAD-glutamate dehydrogenase NO935_13115 PF00529 HlyD membrane-fusion protein of T1SS NO935_13115 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NO935_13120 PF00873 AcrB/AcrD/AcrF family NO935_13145 PF00356 Bacterial regulatory proteins, lacI family NO935_13150 PF00391 PEP-utilising enzyme, mobile domain NO935_13150 PF05524 PEP-utilising enzyme, N-terminal NO935_13150 PF00381 PTS HPr component phosphorylation site NO935_13150 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NO935_13150 PF02896 PEP-utilising enzyme, TIM barrel domain NO935_13155 PF00294 pfkB family carbohydrate kinase NO935_13160 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NO935_13170 PF05598 Transposase domain (DUF772) NO935_13170 PF01609 Transposase DDE domain NO935_13185 PF01609 Transposase DDE domain NO935_13185 PF05598 Transposase domain (DUF772) NO935_13210 PF01609 Transposase DDE domain NO935_13210 PF05598 Transposase domain (DUF772) NO935_13250 PF06715 Gp5 C-terminal repeat (3 copies) NO935_13250 PF04717 Type VI secretion system, phage-baseplate injector NO935_13270 PF01471 Putative peptidoglycan binding domain NO935_13270 PF04717 Type VI secretion system, phage-baseplate injector NO935_13310 PF05598 Transposase domain (DUF772) NO935_13310 PF01609 Transposase DDE domain NO935_13360 PF00593 TonB dependent receptor NO935_13360 PF07715 TonB-dependent Receptor Plug Domain NO935_13370 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NO935_13370 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NO935_13390 PF01618 MotA/TolQ/ExbB proton channel family NO935_13395 PF13677 Membrane MotB of proton-channel complex MotA/MotB NO935_13395 PF00691 OmpA family NO935_13400 PF13614 AAA domain NO935_13405 PF01584 CheW-like domain NO935_13415 PF00072 Response regulator receiver domain NO935_13420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NO935_13420 PF02895 Signal transducing histidine kinase, homodimeric domain NO935_13420 PF09078 CheY binding NO935_13420 PF01584 CheW-like domain NO935_13420 PF01627 Hpt domain NO935_13445 PF00672 HAMP domain NO935_13445 PF02203 Tar ligand binding domain homologue NO935_13445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NO935_13455 PF02203 Tar ligand binding domain homologue NO935_13455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NO935_13455 PF00672 HAMP domain NO935_13465 PF02203 Tar ligand binding domain homologue NO935_13465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NO935_13465 PF00672 HAMP domain NO935_13470 PF00672 HAMP domain NO935_13470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NO935_13470 PF02203 Tar ligand binding domain homologue NO935_13475 PF00672 HAMP domain NO935_13475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NO935_13475 PF02203 Tar ligand binding domain homologue NO935_13480 PF02203 Tar ligand binding domain homologue NO935_13480 PF00672 HAMP domain NO935_13480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NO935_13495 PF07317 Flagellar regulator YcgR NO935_13495 PF07238 PilZ domain NO935_13500 PF01584 CheW-like domain NO935_13515 PF05598 Transposase domain (DUF772) NO935_13515 PF01609 Transposase DDE domain NO935_13545 PF01739 CheR methyltransferase, SAM binding domain NO935_13545 PF03705 CheR methyltransferase, all-alpha domain NO935_13550 PF03975 CheD chemotactic sensory transduction NO935_13555 PF01339 CheB methylesterase NO935_13555 PF00072 Response regulator receiver domain NO935_13560 PF03707 Bacterial signalling protein N terminal repeat NO935_13560 PF00563 EAL domain NO935_13560 PF00990 Diguanylate cyclase, GGDEF domain NO935_13570 PF00561 alpha/beta hydrolase fold NO935_13575 PF00330 Aconitase family (aconitate hydratase) NO935_13575 PF06434 Aconitate hydratase 2 N-terminus NO935_13575 PF11791 Aconitate B N-terminal domain NO935_13590 PF00694 Aconitase C-terminal domain NO935_13590 PF00330 Aconitase family (aconitate hydratase) NO935_13600 PF00501 AMP-binding enzyme NO935_13600 PF13193 AMP-binding enzyme C-terminal domain NO935_13605 PF00378 Enoyl-CoA hydratase/isomerase NO935_13610 PF01627 Hpt domain NO935_13610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NO935_13610 PF00512 His Kinase A (phospho-acceptor) domain NO935_13610 PF00072 Response regulator receiver domain NO935_13615 PF00072 Response regulator receiver domain NO935_13620 PF01336 OB-fold nucleic acid binding domain NO935_13620 PF00152 tRNA synthetases class II (D, K and N) NO935_13675 PF17768 RecJ OB domain NO935_13675 PF02272 DHHA1 domain NO935_13675 PF01368 DHH family NO935_13685 PF01272 Transcription elongation factor, GreA/GreB, C-term NO935_13685 PF03449 Transcription elongation factor, N-terminal NO935_13690 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NO935_13690 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NO935_13690 PF02142 MGS-like domain NO935_13700 PF00117 Glutamine amidotransferase class-I NO935_13700 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain NO935_13705 PF05173 Dihydrodipicolinate reductase, C-terminus NO935_13705 PF01113 Dihydrodipicolinate reductase, N-terminus NO935_13715 PF03473 MOSC domain NO935_13715 PF03475 3-alpha domain NO935_13720 PF00155 Aminotransferase class I and II NO935_13735 PF07664 Ferrous iron transport protein B C terminus NO935_13735 PF02421 Ferrous iron transport protein B NO935_13735 PF07670 Nucleoside recognition NO935_13745 PF00378 Enoyl-CoA hydratase/isomerase NO935_13755 PF00682 HMGL-like NO935_13760 PF00106 short chain dehydrogenase NO935_13765 PF09285 Elongation factor P, C-terminal NO935_13765 PF08207 Elongation factor P (EF-P) KOW-like domain NO935_13765 PF01132 Elongation factor P (EF-P) OB domain NO935_13785 PF00083 Sugar (and other) transporter NO935_13795 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NO935_13795 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NO935_13805 PF16338 Domain of unknown function (DUF4968) NO935_13805 PF17137 Domain of unknown function (DUF5110) NO935_13805 PF01055 Glycosyl hydrolases family 31 NO935_13815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NO935_13815 PF03466 LysR substrate binding domain NO935_13820 PF01081 KDPG and KHG aldolase NO935_13825 PF13378 Enolase C-terminal domain-like NO935_13825 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NO935_13830 PF08450 SMP-30/Gluconolactonase/LRE-like region NO935_13835 PF05035 2-keto-3-deoxy-galactonokinase NO935_13840 PF00037 4Fe-4S binding domain NO935_13840 PF11953 Domain of unknown function (DUF3470) NO935_13850 PF00701 Dihydrodipicolinate synthetase family NO935_13865 PF00578 AhpC/TSA family NO935_13870 PF02562 PhoH-like protein NO935_13870 PF13638 PIN domain NO935_13880 PF08543 Phosphomethylpyrimidine kinase NO935_13905 PF03466 LysR substrate binding domain NO935_13905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NO935_13910 PF02678 Pirin NO935_13910 PF17954 Quercetinase C-terminal cupin domain NO935_13940 PF00772 DnaB-like helicase N terminal domain NO935_13940 PF03796 DnaB-like helicase C terminal domain NO935_13960 PF02599 Global regulator protein family NO935_13965 PF01411 tRNA synthetases class II (A) NO935_13965 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NO935_13965 PF02272 DHHA1 domain NO935_13970 PF02631 RecX family NO935_13975 PF00154 recA bacterial DNA recombination protein NO935_13980 PF01726 LexA DNA binding domain NO935_13980 PF00717 Peptidase S24-like NO935_13985 PF03109 ABC1 family NO935_13990 PF02464 Competence-damaged protein NO935_13995 PF16360 GTP-binding GTPase Middle Region NO935_13995 PF13167 GTP-binding GTPase N-terminal NO935_13995 PF01926 50S ribosome-binding GTPase NO935_14000 PF17209 Hfq protein NO935_14010 PF00809 Pterin binding enzyme NO935_14015 PF01434 Peptidase family M41 NO935_14015 PF00004 ATPase family associated with various cellular activities (AAA) NO935_14015 PF17862 AAA+ lid domain NO935_14015 PF06480 FtsH Extracellular NO935_14020 PF01728 FtsJ-like methyltransferase NO935_14025 PF01985 CRS1 / YhbY (CRM) domain NO935_14035 PF01476 LysM domain NO935_14035 PF01551 Peptidase family M23 NO935_14040 PF09335 SNARE associated Golgi protein NO935_14050 PF01975 Survival protein SurE NO935_14055 PF01713 Smr domain NO935_14060 PF01142 tRNA pseudouridine synthase D (TruD) NO935_14065 PF02542 YgbB family NO935_14075 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NO935_14080 PF04977 Septum formation initiator NO935_14085 PF00113 Enolase, C-terminal TIM barrel domain NO935_14085 PF03952 Enolase, N-terminal domain NO935_14095 PF00793 DAHP synthetase I family NO935_14100 PF06418 CTP synthase N-terminus NO935_14100 PF00117 Glutamine amidotransferase class-I NO935_14110 PF01751 Toprim domain NO935_14110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NO935_14110 PF00204 DNA gyrase B NO935_14110 PF00986 DNA gyrase B subunit, carboxyl terminus NO935_14130 PF01384 Phosphate transporter family NO935_14140 PF00571 CBS domain NO935_14140 PF01595 Cyclin M transmembrane N-terminal domain NO935_14140 PF03471 Transporter associated domain NO935_14155 PF00296 Luciferase-like monooxygenase NO935_14165 PF07690 Major Facilitator Superfamily NO935_14175 PF00664 ABC transporter transmembrane region NO935_14175 PF00005 ABC transporter NO935_14180 PF00005 ABC transporter NO935_14195 PF00534 Glycosyl transferases group 1 NO935_14195 PF13579 Glycosyl transferase 4-like domain NO935_14215 PF08241 Methyltransferase domain NO935_14230 PF00535 Glycosyl transferase family 2 NO935_14235 PF01943 Polysaccharide biosynthesis protein NO935_14240 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NO935_14260 PF05523 WxcM-like, C-terminal NO935_14275 PF00034 Cytochrome c NO935_14285 PF04542 Sigma-70 region 2 NO935_14285 PF08281 Sigma-70, region 4 NO935_14295 PF00082 Subtilase family NO935_14300 PF01578 Cytochrome C assembly protein NO935_14305 PF04995 Heme exporter protein D (CcmD) NO935_14310 PF03100 CcmE NO935_14315 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal NO935_14315 PF01578 Cytochrome C assembly protein NO935_14320 PF08534 Redoxin NO935_14325 PF03918 Cytochrome C biogenesis protein NO935_14350 PF03377 TAL effector repeat NO935_14365 PF03377 TAL effector repeat NO935_14390 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NO935_14390 PF00529 HlyD membrane-fusion protein of T1SS NO935_14440 PF00072 Response regulator receiver domain NO935_14440 PF00486 Transcriptional regulatory protein, C terminal NO935_14445 PF03150 Di-haem cytochrome c peroxidase NO935_14445 PF00034 Cytochrome c NO935_14450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NO935_14450 PF00512 His Kinase A (phospho-acceptor) domain NO935_14455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NO935_14455 PF03466 LysR substrate binding domain NO935_14460 PF06812 ImpA, N-terminal, type VI secretion system NO935_14475 PF00069 Protein kinase domain NO935_14490 PF06761 Intracellular multiplication and human macrophage-killing NO935_14490 PF14331 ImcF-related N-terminal domain NO935_14490 PF06744 Type VI secretion protein IcmF C-terminal NO935_14500 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE NO935_14515 PF06715 Gp5 C-terminal repeat (3 copies) NO935_14515 PF04717 Type VI secretion system, phage-baseplate injector NO935_14540 PF00004 ATPase family associated with various cellular activities (AAA) NO935_14540 PF07724 AAA domain (Cdc48 subfamily) NO935_14540 PF17871 AAA lid domain NO935_14540 PF10431 C-terminal, D2-small domain, of ClpB protein NO935_14550 PF05947 Type VI secretion system, TssF NO935_14555 PF04965 Gene 25-like lysozyme NO935_14560 PF07024 ImpE protein NO935_14565 PF05638 Type VI secretion system effector, Hcp NO935_14570 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath NO935_14575 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 NO935_14580 PF05598 Transposase domain (DUF772) NO935_14580 PF01609 Transposase DDE domain NO935_14625 PF01106 NifU-like domain NO935_14630 PF01329 Pterin 4 alpha carbinolamine dehydratase NO935_14645 PF11737 Protein of unknown function (DUF3300) NO935_14650 PF00849 RNA pseudouridylate synthase NO935_14650 PF01479 S4 domain NO935_14655 PF00575 S1 RNA binding domain NO935_14655 PF10150 Ribonuclease E/G family NO935_14655 PF12111 Polyribonucleotide phosphorylase C terminal NO935_14665 PF00072 Response regulator receiver domain NO935_14665 PF00196 Bacterial regulatory proteins, luxR family NO935_14670 PF00581 Rhodanese-like domain NO935_14670 PF17773 UPF0176 acylphosphatase like domain NO935_14680 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NO935_14690 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NO935_14690 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NO935_14690 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NO935_14700 PF01648 4'-phosphopantetheinyl transferase superfamily NO935_14700 PF17837 4'-phosphopantetheinyl transferase N-terminal domain NO935_14725 PF01609 Transposase DDE domain NO935_14725 PF05598 Transposase domain (DUF772) NO935_14730 PF05598 Transposase domain (DUF772) NO935_14730 PF01609 Transposase DDE domain NO935_14765 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NO935_14765 PF14824 Sirohaem biosynthesis protein central NO935_14765 PF10414 Sirohaem synthase dimerisation region NO935_14790 PF12804 MobA-like NTP transferase domain NO935_14795 PF00994 Probable molybdopterin binding domain NO935_14795 PF03454 MoeA C-terminal region (domain IV) NO935_14795 PF03453 MoeA N-terminal region (domain I and II) NO935_14840 PF00872 Transposase, Mutator family NO935_14855 PF04616 Glycosyl hydrolases family 43 NO935_14860 PF07532 Bacterial Ig-like domain (group 4) NO935_14865 PF07715 TonB-dependent Receptor Plug Domain NO935_14865 PF00593 TonB dependent receptor NO935_14875 PF00082 Subtilase family NO935_14875 PF09286 Pro-kumamolisin, activation domain NO935_14895 PF13520 Amino acid permease NO935_14910 PF01321 Creatinase/Prolidase N-terminal domain NO935_14910 PF00557 Metallopeptidase family M24 NO935_14915 PF00171 Aldehyde dehydrogenase family NO935_14920 PF00701 Dihydrodipicolinate synthetase family NO935_14925 PF04324 BFD-like [2Fe-2S] binding domain NO935_14925 PF07992 Pyridine nucleotide-disulphide oxidoreductase NO935_14935 PF01266 FAD dependent oxidoreductase NO935_14940 PF05544 Proline racemase NO935_14950 PF02881 SRP54-type protein, helical bundle domain NO935_14950 PF00448 SRP54-type protein, GTPase domain NO935_14960 PF00633 Helix-hairpin-helix motif NO935_14960 PF00730 HhH-GPD superfamily base excision DNA repair protein NO935_14960 PF14815 NUDIX domain NO935_14965 PF04362 Bacterial Fe(2+) trafficking NO935_14970 PF00072 Response regulator receiver domain NO935_14970 PF13426 PAS domain NO935_14970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NO935_14980 PF05598 Transposase domain (DUF772) NO935_15050 PF08212 Lipocalin-like domain NO935_15080 PF03808 Glycosyl transferase WecB/TagA/CpsF family NO935_15095 PF14667 Polysaccharide biosynthesis C-terminal domain NO935_15105 PF13439 Glycosyltransferase Family 4 NO935_15105 PF00534 Glycosyl transferases group 1 NO935_15125 PF02397 Bacterial sugar transferase NO935_15145 PF13411 MerR HTH family regulatory protein NO935_15150 PF00216 Bacterial DNA-binding protein NO935_15155 PF03484 tRNA synthetase B5 domain NO935_15155 PF03147 Ferredoxin-fold anticodon binding domain NO935_15155 PF03483 B3/4 domain NO935_15155 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain NO935_15155 PF01588 Putative tRNA binding domain NO935_15160 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain NO935_15160 PF01409 tRNA synthetases class II core domain (F) NO935_15165 PF00453 Ribosomal protein L20 NO935_15170 PF01632 Ribosomal protein L35 NO935_15175 PF05198 Translation initiation factor IF-3, N-terminal domain NO935_15175 PF00707 Translation initiation factor IF-3, C-terminal domain NO935_15180 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NO935_15180 PF02824 TGS domain NO935_15180 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NO935_15180 PF03129 Anticodon binding domain NO935_15210 PF04851 Type III restriction enzyme, res subunit NO935_15210 PF02151 UvrB/uvrC motif NO935_15210 PF12344 Ultra-violet resistance protein B NO935_15210 PF00271 Helicase conserved C-terminal domain NO935_15210 PF17757 UvrB interaction domain NO935_15215 PF00114 Pilin (bacterial filament) NO935_15215 PF07963 Prokaryotic N-terminal methylation motif NO935_15225 PF07963 Prokaryotic N-terminal methylation motif NO935_15225 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor NO935_15230 PF05567 Neisseria PilC beta-propeller domain NO935_15250 PF12019 Type II transport protein GspH NO935_15250 PF07963 Prokaryotic N-terminal methylation motif NO935_15255 PF11892 Domain of unknown function (DUF3412) NO935_15255 PF03641 Possible lysine decarboxylase NO935_15255 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases NO935_15260 PF00593 TonB dependent receptor NO935_15270 PF01914 MarC family integral membrane protein NO935_15280 PF00462 Glutaredoxin NO935_15285 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NO935_15285 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NO935_15290 PF02222 ATP-grasp domain NO935_15290 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain NO935_15295 PF00731 AIR carboxylase NO935_15305 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain NO935_15305 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain NO935_15315 PF03725 3' exoribonuclease family, domain 2 NO935_15315 PF00575 S1 RNA binding domain NO935_15315 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain NO935_15315 PF00013 KH domain NO935_15315 PF01138 3' exoribonuclease family, domain 1 NO935_15320 PF00312 Ribosomal protein S15 NO935_15325 PF16198 tRNA pseudouridylate synthase B C-terminal domain NO935_15325 PF01509 TruB family pseudouridylate synthase (N terminal domain) NO935_15325 PF09157 Pseudouridine synthase II TruB, C-terminal NO935_15330 PF02033 Ribosome-binding factor A NO935_15335 PF04760 Translation initiation factor IF-2, N-terminal region NO935_15335 PF00009 Elongation factor Tu GTP binding domain NO935_15335 PF11987 Translation-initiation factor 2 NO935_15335 PF08364 Bacterial translation initiation factor IF-2 associated region NO935_15340 PF13184 NusA-like KH domain NO935_15340 PF08529 NusA N-terminal domain NO935_15340 PF00575 S1 RNA binding domain NO935_15345 PF02576 RimP N-terminal domain NO935_15345 PF17384 RimP C-terminal SH3 domain NO935_15355 PF00361 Proton-conducting membrane transporter NO935_15360 PF00361 Proton-conducting membrane transporter NO935_15360 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus NO935_15365 PF00361 Proton-conducting membrane transporter NO935_15365 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NO935_15370 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NO935_15375 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 NO935_15380 PF12838 4Fe-4S dicluster domain NO935_15385 PF00146 NADH dehydrogenase NO935_15390 PF00384 Molybdopterin oxidoreductase NO935_15390 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NO935_15390 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal NO935_15395 PF10531 SLBB domain NO935_15395 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NO935_15395 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region NO935_15405 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NO935_15410 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit NO935_15415 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit NO935_15420 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 NO935_15435 PF00121 Triosephosphate isomerase NO935_15460 PF03707 Bacterial signalling protein N terminal repeat NO935_15460 PF00990 Diguanylate cyclase, GGDEF domain NO935_15460 PF00563 EAL domain NO935_15475 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NO935_15475 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NO935_15475 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NO935_15475 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NO935_15480 PF01039 Carboxyl transferase domain NO935_15480 PF17848 Acetyl-coA carboxylase zinc finger domain NO935_15485 PF00290 Tryptophan synthase alpha chain NO935_15495 PF00291 Pyridoxal-phosphate dependent enzyme NO935_15500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NO935_15500 PF03466 LysR substrate binding domain NO935_15505 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase NO935_15510 PF01416 tRNA pseudouridine synthase NO935_15530 PF02774 Semialdehyde dehydrogenase, dimerisation domain NO935_15530 PF01118 Semialdehyde dehydrogenase, NAD binding domain NO935_15535 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NO935_15535 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NO935_15540 PF01264 Chorismate synthase NO935_15545 PF05175 Methyltransferase small domain NO935_15550 PF02630 SCO1/SenC NO935_15555 PF02666 Phosphatidylserine decarboxylase NO935_15585 PF01272 Transcription elongation factor, GreA/GreB, C-term NO935_15585 PF03449 Transcription elongation factor, N-terminal NO935_15590 PF18693 TRAM domain NO935_15590 PF04055 Radical SAM superfamily NO935_15590 PF00919 Uncharacterized protein family UPF0004 NO935_15615 PF00692 dUTPase NO935_15620 PF10609 NUBPL iron-transfer P-loop NTPase NO935_15660 PF01266 FAD dependent oxidoreductase NO935_15665 PF04235 Protein of unknown function (DUF418) NO935_15670 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NO935_15675 PF00877 NlpC/P60 family NO935_15680 PF00877 NlpC/P60 family NO935_15700 PF00245 Alkaline phosphatase NO935_15705 PF11734 TilS substrate C-terminal domain NO935_15705 PF09179 TilS substrate binding domain NO935_15705 PF01171 PP-loop family NO935_15710 PF02609 Exonuclease VII small subunit NO935_15715 PF00348 Polyprenyl synthetase NO935_15735 PF01523 Putative modulator of DNA gyrase NO935_15740 PF04751 Protein of unknown function (DUF615) NO935_15745 PF01523 Putative modulator of DNA gyrase NO935_15755 PF13502 AsmA-like C-terminal region NO935_15755 PF13116 Protein of unknown function NO935_15760 PF10150 Ribonuclease E/G family NO935_15760 PF00575 S1 RNA binding domain NO935_15765 PF02545 Maf-like protein NO935_15770 PF04402 Protein of unknown function (DUF541) NO935_15800 PF02590 Predicted SPOUT methyltransferase NO935_15825 PF01467 Cytidylyltransferase-like NO935_15840 PF08264 Anticodon-binding domain of tRNA NO935_15840 PF00133 tRNA synthetases class I (I, L, M and V) NO935_15840 PF13603 Leucyl-tRNA synthetase, Domain 2 NO935_15850 PF00085 Thioredoxin NO935_15910 PF00128 Alpha amylase, catalytic domain NO935_15910 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NO935_15915 PF01609 Transposase DDE domain NO935_15915 PF05598 Transposase domain (DUF772) NO935_15985 PF00657 GDSL-like Lipase/Acylhydrolase NO935_15985 PF03797 Autotransporter beta-domain NO935_15995 PF05690 Thiazole biosynthesis protein ThiG NO935_16000 PF02390 Putative methyltransferase NO935_16005 PF03600 Citrate transporter NO935_16005 PF02080 TrkA-C domain NO935_16030 PF01557 Fumarylacetoacetate (FAA) hydrolase family NO935_16035 PF01741 Large-conductance mechanosensitive channel, MscL NO935_16055 PF00135 Carboxylesterase family NO935_16060 PF00588 SpoU rRNA Methylase family NO935_16060 PF08032 RNA 2'-O ribose methyltransferase substrate binding NO935_16080 PF01433 Peptidase family M1 domain NO935_16080 PF11838 ERAP1-like C-terminal domain NO935_16085 PF00873 AcrB/AcrD/AcrF family NO935_16090 PF00529 HlyD membrane-fusion protein of T1SS NO935_16090 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NO935_16095 PF00009 Elongation factor Tu GTP binding domain NO935_16100 PF01507 Phosphoadenosine phosphosulfate reductase family NO935_16105 PF00175 Oxidoreductase NAD-binding domain NO935_16105 PF00258 Flavodoxin NO935_16105 PF00667 FAD binding domain NO935_16110 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NO935_16110 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NO935_16115 PF01507 Phosphoadenosine phosphosulfate reductase family NO935_16135 PF00672 HAMP domain NO935_16135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NO935_16135 PF00512 His Kinase A (phospho-acceptor) domain NO935_16135 PF01627 Hpt domain NO935_16135 PF00072 Response regulator receiver domain NO935_16160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NO935_16160 PF03466 LysR substrate binding domain NO935_16165 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NO935_16165 PF14824 Sirohaem biosynthesis protein central NO935_16165 PF10414 Sirohaem synthase dimerisation region NO935_16170 PF00291 Pyridoxal-phosphate dependent enzyme NO935_16180 PF01661 Macro domain NO935_16185 PF00274 Fructose-bisphosphate aldolase class-I NO935_16190 PF00224 Pyruvate kinase, barrel domain NO935_16190 PF02887 Pyruvate kinase, alpha/beta domain NO935_16195 PF13419 Haloacid dehalogenase-like hydrolase NO935_16200 PF00162 Phosphoglycerate kinase NO935_16230 PF18011 C-terminal domain found in long catalases NO935_16230 PF00199 Catalase NO935_16230 PF06628 Catalase-related immune-responsive NO935_16255 PF12833 Helix-turn-helix domain NO935_16255 PF02311 AraC-like ligand binding domain NO935_16275 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region NO935_16275 PF07676 WD40-like Beta Propeller Repeat NO935_16275 PF00326 Prolyl oligopeptidase family NO935_16295 PF03169 OPT oligopeptide transporter protein NO935_16310 PF07733 Bacterial DNA polymerase III alpha NTPase domain NO935_16310 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NO935_16310 PF14579 Helix-hairpin-helix motif NO935_16310 PF02811 PHP domain NO935_16330 PF01726 LexA DNA binding domain NO935_16330 PF00717 Peptidase S24-like NO935_16355 PF00300 Histidine phosphatase superfamily (branch 1) NO935_16355 PF13456 Reverse transcriptase-like NO935_16385 PF18766 SWI2/SNF2 ATPase NO935_16385 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) NO935_16385 PF11867 Domain of unknown function (DUF3387) NO935_16400 PF01909 Nucleotidyltransferase domain NO935_16405 PF08780 Nucleotidyltransferase substrate binding protein like NO935_16410 PF02384 N-6 DNA Methylase NO935_16430 PF04851 Type III restriction enzyme, res subunit NO935_16430 PF08463 EcoEI R protein C-terminal NO935_16430 PF00271 Helicase conserved C-terminal domain NO935_16430 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) NO935_16440 PF02384 N-6 DNA Methylase NO935_16445 PF01420 Type I restriction modification DNA specificity domain NO935_16450 PF05598 Transposase domain (DUF772) NO935_16450 PF01609 Transposase DDE domain NO935_16455 PF01420 Type I restriction modification DNA specificity domain NO935_16540 PF00004 ATPase family associated with various cellular activities (AAA) NO935_16540 PF17871 AAA lid domain NO935_16540 PF10431 C-terminal, D2-small domain, of ClpB protein NO935_16540 PF07724 AAA domain (Cdc48 subfamily) NO935_16550 PF05947 Type VI secretion system, TssF NO935_16565 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath NO935_16570 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 NO935_16595 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) NO935_16595 PF04717 Type VI secretion system, phage-baseplate injector NO935_16595 PF13296 Putative type VI secretion system Rhs element Vgr NO935_16650 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) NO935_16650 PF04717 Type VI secretion system, phage-baseplate injector NO935_16650 PF13296 Putative type VI secretion system Rhs element Vgr NO935_16660 PF00182 Chitinase class I NO935_16670 PF04717 Type VI secretion system, phage-baseplate injector NO935_16670 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) NO935_16670 PF13296 Putative type VI secretion system Rhs element Vgr NO935_16685 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) NO935_16685 PF13296 Putative type VI secretion system Rhs element Vgr NO935_16685 PF04717 Type VI secretion system, phage-baseplate injector NO935_16720 PF06715 Gp5 C-terminal repeat (3 copies) NO935_16720 PF04717 Type VI secretion system, phage-baseplate injector NO935_16730 PF02678 Pirin NO935_16730 PF05726 Pirin C-terminal cupin domain NO935_16735 PF13722 5TM C-terminal transporter carbon starvation CstA NO935_16735 PF02554 Carbon starvation protein CstA NO935_16740 PF04328 Selenoprotein, putative NO935_16765 PF05598 Transposase domain (DUF772) NO935_16765 PF01609 Transposase DDE domain NO935_16785 PF00563 EAL domain NO935_16785 PF00360 Phytochrome region NO935_16785 PF01590 GAF domain NO935_16785 PF00990 Diguanylate cyclase, GGDEF domain NO935_16790 PF00436 Single-strand binding protein family NO935_16795 PF00348 Polyprenyl synthetase NO935_16805 PF08245 Mur ligase middle domain NO935_16820 PF01842 ACT domain NO935_16820 PF00696 Amino acid kinase family NO935_16830 PF02567 Phenazine biosynthesis-like protein NO935_16840 PF02566 OsmC-like protein NO935_16850 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NO935_16850 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NO935_16855 PF03652 Holliday junction resolvase NO935_16860 PF02622 Uncharacterized ACR, COG1678 NO935_16875 PF00958 GMP synthase C terminal domain NO935_16875 PF13673 Acetyltransferase (GNAT) domain NO935_16875 PF13302 Acetyltransferase (GNAT) domain NO935_16875 PF03352 Methyladenine glycosylase NO935_16875 PF00117 Glutamine amidotransferase class-I NO935_16895 PF00437 Type II/IV secretion system protein NO935_16900 PF00437 Type II/IV secretion system protein NO935_16905 PF01168 Alanine racemase, N-terminal domain NO935_16910 PF14748 Pyrroline-5-carboxylate reductase dimerisation NO935_16910 PF03807 NADP oxidoreductase coenzyme F420-dependent NO935_16965 PF02082 Transcriptional regulator NO935_16970 PF01458 Uncharacterized protein family (UPF0051) NO935_16975 PF00005 ABC transporter NO935_16980 PF01458 Uncharacterized protein family (UPF0051) NO935_16985 PF00266 Aminotransferase class-V NO935_17000 PF00355 Rieske [2Fe-2S] domain NO935_17035 PF00266 Aminotransferase class-V NO935_17040 PF01053 Cys/Met metabolism PLP-dependent enzyme NO935_17050 PF07722 Peptidase C26 NO935_17055 PF01810 LysE type translocator NO935_17060 PF04204 Homoserine O-succinyltransferase NO935_17065 PF00120 Glutamine synthetase, catalytic domain NO935_17070 PF00872 Transposase, Mutator family NO935_17095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NO935_17095 PF00183 Hsp90 protein NO935_17100 PF12833 Helix-turn-helix domain NO935_17125 PF13472 GDSL-like Lipase/Acylhydrolase family NO935_17125 PF07859 alpha/beta hydrolase fold NO935_17135 PF03466 LysR substrate binding domain NO935_17135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NO935_17150 PF00005 ABC transporter NO935_17150 PF12848 ABC transporter NO935_17155 PF00593 TonB dependent receptor NO935_17155 PF07715 TonB-dependent Receptor Plug Domain NO935_17170 PF07715 TonB-dependent Receptor Plug Domain NO935_17170 PF00593 TonB dependent receptor NO935_17175 PF00593 TonB dependent receptor NO935_17175 PF07715 TonB-dependent Receptor Plug Domain NO935_17185 PF00999 Sodium/hydrogen exchanger family NO935_17185 PF02254 TrkA-N domain NO935_17200 PF07660 Secretin and TonB N terminus short domain NO935_17200 PF00593 TonB dependent receptor NO935_17200 PF07715 TonB-dependent Receptor Plug Domain NO935_17210 PF06276 Ferric iron reductase FhuF-like transporter NO935_17210 PF04183 IucA / IucC family NO935_17215 PF07690 Major Facilitator Superfamily NO935_17220 PF04183 IucA / IucC family NO935_17220 PF06276 Ferric iron reductase FhuF-like transporter NO935_17225 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NO935_17225 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NO935_17235 PF02654 Cobalamin-5-phosphate synthase NO935_17245 PF02277 Phosphoribosyltransferase NO935_17250 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase NO935_17265 PF12557 Cob(I)alamin adenosyltransferase N terminal NO935_17265 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP NO935_17290 PF07715 TonB-dependent Receptor Plug Domain NO935_17290 PF00593 TonB dependent receptor NO935_17315 PF05598 Transposase domain (DUF772) NO935_17315 PF01609 Transposase DDE domain NO935_17330 PF07724 AAA domain (Cdc48 subfamily) NO935_17330 PF00004 ATPase family associated with various cellular activities (AAA) NO935_17330 PF10431 C-terminal, D2-small domain, of ClpB protein NO935_17330 PF17871 AAA lid domain NO935_17330 PF02861 Clp amino terminal domain, pathogenicity island component NO935_17335 PF01541 GIY-YIG catalytic domain NO935_17360 PF01479 S4 domain NO935_17375 PF01245 Ribosomal protein L19 NO935_17380 PF01746 tRNA (Guanine-1)-methyltransferase NO935_17385 PF01782 RimM N-terminal domain NO935_17385 PF05239 PRC-barrel domain NO935_17390 PF00886 Ribosomal protein S16 NO935_17400 PF03060 Nitronate monooxygenase NO935_17410 PF02881 SRP54-type protein, helical bundle domain NO935_17410 PF00448 SRP54-type protein, GTPase domain NO935_17410 PF02978 Signal peptide binding domain NO935_17420 PF01578 Cytochrome C assembly protein NO935_17425 PF01263 Aldose 1-epimerase NO935_17430 PF06964 Alpha-L-arabinofuranosidase C-terminal domain NO935_17470 PF07687 Peptidase dimerisation domain NO935_17470 PF01546 Peptidase family M20/M25/M40 NO935_17485 PF01636 Phosphotransferase enzyme family NO935_17490 PF00483 Nucleotidyl transferase NO935_17495 PF00308 Bacterial dnaA protein NO935_17500 PF01594 AI-2E family transporter NO935_17510 PF00586 AIR synthase related protein, N-terminal domain NO935_17510 PF02769 AIR synthase related protein, C-terminal domain NO935_17525 PF00551 Formyl transferase NO935_17545 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NO935_17550 PF01722 BolA-like protein NO935_17555 PF00571 CBS domain NO935_17555 PF01380 SIS domain NO935_17570 PF03968 OstA-like protein NO935_17575 PF00005 ABC transporter NO935_17580 PF04552 Sigma-54, DNA binding domain NO935_17580 PF04963 Sigma-54 factor, core binding domain NO935_17580 PF00309 Sigma-54 factor, Activator interacting domain (AID) NO935_17585 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NO935_17590 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NO935_17595 PF07475 HPr Serine kinase C-terminal domain NO935_17595 PF02603 HPr Serine kinase N terminus NO935_17600 PF03668 P-loop ATPase protein family NO935_17615 PF00381 PTS HPr component phosphorylation site NO935_17620 PF05524 PEP-utilising enzyme, N-terminal NO935_17620 PF00391 PEP-utilising enzyme, mobile domain NO935_17620 PF02896 PEP-utilising enzyme, TIM barrel domain NO935_17625 PF00571 CBS domain NO935_17625 PF01769 Divalent cation transporter NO935_17625 PF03448 MgtE intracellular N domain NO935_17630 PF00756 Putative esterase NO935_17635 PF02322 Cytochrome bd terminal oxidase subunit II NO935_17640 PF01654 Cytochrome bd terminal oxidase subunit I NO935_17655 PF00324 Amino acid permease NO935_17665 PF00561 alpha/beta hydrolase fold NO935_17670 PF00196 Bacterial regulatory proteins, luxR family NO935_17675 PF00324 Amino acid permease NO935_17690 PF12706 Beta-lactamase superfamily domain NO935_17695 PF04820 Tryptophan halogenase NO935_17720 PF00376 MerR family regulatory protein NO935_17720 PF09278 MerR, DNA binding NO935_17735 PF03738 Glutathionylspermidine synthase preATP-grasp NO935_17760 PF04012 PspA/IM30 family NO935_17770 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region NO935_17770 PF01243 Pyridoxamine 5'-phosphate oxidase NO935_17775 PF01202 Shikimate kinase NO935_17780 PF01761 3-dehydroquinate synthase NO935_17790 PF01208 Uroporphyrinogen decarboxylase (URO-D) NO935_17805 PF03377 TAL effector repeat NO935_17820 PF03377 TAL effector repeat NO935_17835 PF03377 TAL effector repeat NO935_17850 PF03377 TAL effector repeat NO935_17865 PF03377 TAL effector repeat NO935_17885 PF00202 Aminotransferase class-III NO935_17895 PF00127 Copper binding proteins, plastocyanin/azurin family NO935_17910 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NO935_17910 PF00034 Cytochrome c NO935_17915 PF01593 Flavin containing amine oxidoreductase NO935_17945 PF00202 Aminotransferase class-III NO935_17950 PF00520 Ion transport protein NO935_17950 PF00027 Cyclic nucleotide-binding domain NO935_17980 PF05598 Transposase domain (DUF772) NO935_17980 PF01609 Transposase DDE domain NO935_17985 PF18030 RimK PreATP-grasp domain NO935_17985 PF08443 RimK-like ATP-grasp domain NO935_17995 PF00072 Response regulator receiver domain NO935_17995 PF00486 Transcriptional regulatory protein, C terminal NO935_18000 PF00672 HAMP domain NO935_18000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NO935_18000 PF00512 His Kinase A (phospho-acceptor) domain NO935_18020 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NO935_18020 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NO935_18050 PF00753 Metallo-beta-lactamase superfamily NO935_18050 PF04273 Putative phosphatase (DUF442) NO935_18060 PF00528 Binding-protein-dependent transport system inner membrane component NO935_18065 PF00005 ABC transporter NO935_18065 PF03459 TOBE domain NO935_18085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NO935_18085 PF00512 His Kinase A (phospho-acceptor) domain NO935_18085 PF08521 Two-component sensor kinase N-terminal NO935_18090 PF00072 Response regulator receiver domain NO935_18090 PF00486 Transcriptional regulatory protein, C terminal NO935_18115 PF00501 AMP-binding enzyme NO935_18140 PF01476 LysM domain NO935_18140 PF03734 L,D-transpeptidase catalytic domain NO935_18145 PF04225 Opacity-associated protein A LysM-like domain NO935_18145 PF01551 Peptidase family M23 NO935_18155 PF02780 Transketolase, C-terminal domain NO935_18155 PF00456 Transketolase, thiamine diphosphate binding domain NO935_18155 PF02779 Transketolase, pyrimidine binding domain NO935_18160 PF00375 Sodium:dicarboxylate symporter family NO935_18180 PF00092 von Willebrand factor type A domain NO935_18180 PF07584 Aerotolerance regulator N-terminal NO935_18200 PF07726 ATPase family associated with various cellular activities (AAA) NO935_18200 PF17863 AAA lid domain NO935_18215 PF11741 AMIN domain NO935_18215 PF00263 Bacterial type II and III secretion system protein NO935_18215 PF03958 Bacterial type II/III secretion system short domain NO935_18215 PF07660 Secretin and TonB N terminus short domain NO935_18220 PF04351 Pilus assembly protein, PilP NO935_18225 PF04350 Pilus assembly protein, PilO NO935_18230 PF05137 Fimbrial assembly protein (PilN) NO935_18235 PF11104 Type IV pilus assembly protein PilM; NO935_18240 PF17092 Penicillin-binding protein OB-like domain NO935_18240 PF00912 Transglycosylase NO935_18240 PF00905 Penicillin binding protein transpeptidase domain NO935_18250 PF00285 Citrate synthase, C-terminal domain NO935_18255 PF01197 Ribosomal protein L31 NO935_18260 PF01156 Inosine-uridine preferring nucleoside hydrolase NO935_18265 PF17191 RecG wedge domain NO935_18265 PF00271 Helicase conserved C-terminal domain NO935_18265 PF00270 DEAD/DEAH box helicase NO935_18270 PF01042 Endoribonuclease L-PSP NO935_18275 PF13291 ACT domain NO935_18275 PF04607 Region found in RelA / SpoT proteins NO935_18275 PF02824 TGS domain NO935_18280 PF01192 RNA polymerase Rpb6 NO935_18295 PF00625 Guanylate kinase NO935_18300 PF03755 YicC-like family, N-terminal region NO935_18300 PF08340 Domain of unknown function (DUF1732) NO935_18305 PF03725 3' exoribonuclease family, domain 2 NO935_18305 PF01138 3' exoribonuclease family, domain 1 NO935_18315 PF01725 Ham1 family NO935_18320 PF06969 HemN C-terminal domain NO935_18320 PF04055 Radical SAM superfamily NO935_18335 PF00557 Metallopeptidase family M24 NO935_18355 PF05195 Aminopeptidase P, N-terminal domain NO935_18355 PF00557 Metallopeptidase family M24 NO935_18360 PF03695 Uncharacterised protein family (UPF0149) NO935_18370 PF05164 Cell division protein ZapA NO935_18380 PF01812 5-formyltetrahydrofolate cyclo-ligase family NO935_18390 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) NO935_18400 PF13369 Transglutaminase-like superfamily NO935_18405 PF00301 Rubredoxin NO935_18410 PF02581 Thiamine monophosphate synthase NO935_18435 PF03949 Malic enzyme, NAD binding domain NO935_18435 PF00390 Malic enzyme, N-terminal domain NO935_18435 PF01515 Phosphate acetyl/butaryl transferase NO935_18440 PF00375 Sodium:dicarboxylate symporter family NO935_18455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NO935_18455 PF00512 His Kinase A (phospho-acceptor) domain NO935_18460 PF07690 Major Facilitator Superfamily NO935_18470 PF03466 LysR substrate binding domain NO935_18470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NO935_18490 PF00196 Bacterial regulatory proteins, luxR family NO935_18490 PF00072 Response regulator receiver domain NO935_18500 PF08521 Two-component sensor kinase N-terminal NO935_18500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NO935_18500 PF00512 His Kinase A (phospho-acceptor) domain NO935_18505 PF00486 Transcriptional regulatory protein, C terminal NO935_18505 PF00072 Response regulator receiver domain NO935_18515 PF03600 Citrate transporter NO935_18520 PF00106 short chain dehydrogenase NO935_18525 PF00356 Bacterial regulatory proteins, lacI family NO935_18545 PF00128 Alpha amylase, catalytic domain NO935_18560 PF03193 RsgA GTPase NO935_18565 PF00155 Aminotransferase class I and II NO935_18585 PF01522 Polysaccharide deacetylase NO935_18590 PF00462 Glutaredoxin NO935_18650 PF01327 Polypeptide deformylase NO935_18655 PF03960 ArsC family NO935_18670 PF07726 ATPase family associated with various cellular activities (AAA) NO935_18670 PF17863 AAA lid domain NO935_18680 PF11992 Domain of unknown function (DUF3488) NO935_18680 PF13559 Domain of unknown function (DUF4129) NO935_18680 PF01841 Transglutaminase-like superfamily NO935_18690 PF01230 HIT domain NO935_18695 PF13662 Toprim domain NO935_18695 PF02132 RecR protein NO935_18700 PF02575 YbaB/EbfC DNA-binding family NO935_18705 PF12169 DNA polymerase III subunits gamma and tau domain III NO935_18705 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding NO935_18705 PF12170 DNA polymerase III tau subunit V interacting with alpha NO935_18720 PF02391 MoaE protein NO935_18725 PF02597 ThiS family NO935_18730 PF01967 MoaC family NO935_18740 PF06463 Molybdenum Cofactor Synthesis C NO935_18740 PF04055 Radical SAM superfamily NO935_18745 PF00753 Metallo-beta-lactamase superfamily NO935_18745 PF12706 Beta-lactamase superfamily domain NO935_18755 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NO935_18765 PF00589 Phage integrase family NO935_18765 PF13356 Arm DNA-binding domain NO935_18800 PF13296 Putative type VI secretion system Rhs element Vgr NO935_18800 PF04717 Type VI secretion system, phage-baseplate injector NO935_18800 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) NO935_18835 PF00929 Exonuclease NO935_18840 PF00075 RNase H NO935_18850 PF16123 Hydroxyacylglutathione hydrolase C-terminus NO935_18850 PF00753 Metallo-beta-lactamase superfamily NO935_18855 PF05257 CHAP domain NO935_18855 PF01476 LysM domain NO935_18880 PF00216 Bacterial DNA-binding protein NO935_18885 PF00004 ATPase family associated with various cellular activities (AAA) NO935_18885 PF05362 Lon protease (S16) C-terminal proteolytic domain NO935_18885 PF02190 ATP-dependent protease La (LON) substrate-binding domain NO935_18890 PF07724 AAA domain (Cdc48 subfamily) NO935_18890 PF10431 C-terminal, D2-small domain, of ClpB protein NO935_18890 PF06689 ClpX C4-type zinc finger NO935_18895 PF00574 Clp protease NO935_18900 PF05697 Bacterial trigger factor protein (TF) NO935_18900 PF05698 Bacterial trigger factor protein (TF) C-terminus NO935_18950 PF00180 Isocitrate/isopropylmalate dehydrogenase NO935_18950 PF18324 Hypothetical protein TT1725 NO935_18970 PF00462 Glutaredoxin NO935_18975 PF01435 Peptidase family M48 NO935_18975 PF13181 Tetratricopeptide repeat NO935_18980 PF00072 Response regulator receiver domain NO935_18980 PF00486 Transcriptional regulatory protein, C terminal NO935_18985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NO935_18985 PF11808 Phosphate regulon sensor protein PhoR NO935_18985 PF00989 PAS fold NO935_18985 PF00512 His Kinase A (phospho-acceptor) domain NO935_18990 PF02503 Polyphosphate kinase middle domain NO935_18990 PF13090 Polyphosphate kinase C-terminal domain 2 NO935_18990 PF17941 Polyphosphate kinase C-terminal domain 1 NO935_18990 PF13089 Polyphosphate kinase N-terminal domain NO935_18995 PF02541 Ppx/GppA phosphatase family NO935_19000 PF13439 Glycosyltransferase Family 4 NO935_19000 PF00534 Glycosyl transferases group 1 NO935_19005 PF01569 PAP2 superfamily NO935_19010 PF00149 Calcineurin-like phosphoesterase NO935_19035 PF04305 Protein of unknown function (DUF455) NO935_19040 PF00156 Phosphoribosyl transferase domain NO935_19055 PF02875 Mur ligase family, glutamate ligase domain NO935_19055 PF08245 Mur ligase middle domain NO935_19065 PF00300 Histidine phosphatase superfamily (branch 1) NO935_19070 PF10459 Peptidase S46 NO935_19085 PF08240 Alcohol dehydrogenase GroES-like domain NO935_19085 PF00107 Zinc-binding dehydrogenase NO935_19095 PF17850 CysA C-terminal regulatory domain NO935_19095 PF12857 TOBE-like domain NO935_19095 PF00005 ABC transporter NO935_19100 PF00528 Binding-protein-dependent transport system inner membrane component NO935_19105 PF00528 Binding-protein-dependent transport system inner membrane component NO935_19115 PF00155 Aminotransferase class I and II NO935_19125 PF00849 RNA pseudouridylate synthase NO935_19135 PF05736 OprF membrane domain NO935_19135 PF00691 OmpA family NO935_19140 PF08240 Alcohol dehydrogenase GroES-like domain NO935_19140 PF00107 Zinc-binding dehydrogenase NO935_19145 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NO935_19145 PF07992 Pyridine nucleotide-disulphide oxidoreductase NO935_19180 PF03009 Glycerophosphoryl diester phosphodiesterase family NO935_19205 PF01609 Transposase DDE domain NO935_19205 PF05598 Transposase domain (DUF772) NO935_19220 PF00043 Glutathione S-transferase, C-terminal domain NO935_19220 PF02798 Glutathione S-transferase, N-terminal domain NO935_19225 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NO935_19225 PF00056 lactate/malate dehydrogenase, NAD binding domain NO935_19230 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NO935_19235 PF03144 Elongation factor Tu domain 2 NO935_19235 PF00679 Elongation factor G C-terminus NO935_19235 PF00009 Elongation factor Tu GTP binding domain NO935_19255 PF01474 Class-II DAHP synthetase family NO935_19265 PF02600 Disulfide bond formation protein DsbB NO935_19400 PF01062 Bestrophin, RFP-TM, chloride channel NO935_19410 PF08245 Mur ligase middle domain NO935_19410 PF01225 Mur ligase family, catalytic domain NO935_19410 PF02875 Mur ligase family, glutamate ligase domain NO935_19420 PF00365 Phosphofructokinase NO935_19440 PF03030 Inorganic H+ pyrophosphatase NO935_19450 PF00719 Inorganic pyrophosphatase NO935_19465 PF07715 TonB-dependent Receptor Plug Domain NO935_19465 PF00593 TonB dependent receptor NO935_19470 PF12833 Helix-turn-helix domain NO935_19475 PF18500 CadC C-terminal domain 1 NO935_19475 PF00486 Transcriptional regulatory protein, C terminal NO935_19480 PF13667 ThiC-associated domain NO935_19480 PF01964 Radical SAM ThiC family NO935_19490 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain NO935_19490 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain NO935_19495 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NO935_19495 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NO935_19495 PF00205 Thiamine pyrophosphate enzyme, central domain NO935_19505 PF00291 Pyridoxal-phosphate dependent enzyme NO935_19510 PF00682 HMGL-like NO935_19510 PF08502 LeuA allosteric (dimerisation) domain NO935_19515 PF00180 Isocitrate/isopropylmalate dehydrogenase NO935_19525 PF00694 Aconitase C-terminal domain NO935_19530 PF00330 Aconitase family (aconitate hydratase) NO935_19535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NO935_19565 PF02321 Outer membrane efflux protein NO935_19570 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) NO935_19575 PF03279 Bacterial lipid A biosynthesis acyltransferase NO935_19610 PF05598 Transposase domain (DUF772) NO935_19625 PF01433 Peptidase family M1 domain NO935_19625 PF11838 ERAP1-like C-terminal domain NO935_19630 PF00709 Adenylosuccinate synthetase NO935_19640 PF01145 SPFH domain / Band 7 family NO935_19645 PF01145 SPFH domain / Band 7 family NO935_19645 PF12221 Bacterial membrane protein N terminal NO935_19650 PF00072 Response regulator receiver domain NO935_19655 PF00226 DnaJ domain NO935_19655 PF01556 DnaJ C terminal domain NO935_19665 PF08534 Redoxin NO935_19675 PF00665 Integrase core domain NO935_19675 PF13936 Helix-turn-helix domain NO935_19740 PF07715 TonB-dependent Receptor Plug Domain NO935_19740 PF00593 TonB dependent receptor NO935_19745 PF04303 PrpF protein NO935_19755 PF00330 Aconitase family (aconitate hydratase) NO935_19755 PF00694 Aconitase C-terminal domain NO935_19760 PF00285 Citrate synthase, C-terminal domain NO935_19770 PF00158 Sigma-54 interaction domain NO935_19770 PF06506 Propionate catabolism activator NO935_19770 PF02954 Bacterial regulatory protein, Fis family NO935_19800 PF09115 DNA polymerase III, delta subunit, C terminal NO935_19805 PF02618 YceG-like family NO935_19810 PF00425 chorismate binding enzyme NO935_19810 PF04715 Anthranilate synthase component I, N terminal region NO935_19815 PF02801 Beta-ketoacyl synthase, C-terminal domain NO935_19815 PF00109 Beta-ketoacyl synthase, N-terminal domain NO935_19820 PF00550 Phosphopantetheine attachment site NO935_19830 PF00698 Acyl transferase domain NO935_19840 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NO935_19840 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NO935_19845 PF01783 Ribosomal L32p protein family NO935_19850 PF02620 Large ribosomal RNA subunit accumulation protein YceD NO935_19855 PF02545 Maf-like protein NO935_19870 PF09704 CRISPR-associated protein (Cas_Cas5) NO935_19890 PF01867 CRISPR associated protein Cas1 NO935_19895 PF09827 CRISPR associated protein Cas2 NO935_19925 PF07715 TonB-dependent Receptor Plug Domain NO935_19925 PF00593 TonB dependent receptor NO935_19940 PF00392 Bacterial regulatory proteins, gntR family NO935_19940 PF07702 UTRA domain NO935_19955 PF00263 Bacterial type II and III secretion system protein NO935_19955 PF03958 Bacterial type II/III secretion system short domain NO935_19965 PF10741 Type II secretion system (T2SS), protein M subtype b NO935_19970 PF05137 Fimbrial assembly protein (PilN) NO935_19975 PF03934 Type II secretion system (T2SS), protein K NO935_19985 PF07963 Prokaryotic N-terminal methylation motif NO935_19990 PF12019 Type II transport protein GspH NO935_19995 PF08334 Type II secretion system (T2SS), protein G NO935_20000 PF00482 Type II secretion system (T2SS), protein F NO935_20010 PF00437 Type II/IV secretion system protein NO935_20010 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NO935_20020 PF13018 Extended Signal Peptide of Type V secretion system NO935_20020 PF05658 Head domain of trimeric autotransporter adhesin NO935_20020 PF05662 Coiled stalk of trimeric autotransporter adhesin NO935_20020 PF03895 YadA-like membrane anchor domain NO935_20025 PF02769 AIR synthase related protein, C-terminal domain NO935_20025 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain NO935_20025 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal NO935_20030 PF10411 Disulfide bond isomerase protein N-terminus NO935_20030 PF13098 Thioredoxin-like domain NO935_20035 PF02899 Phage integrase, N-terminal SAM-like domain NO935_20035 PF00589 Phage integrase family NO935_20050 PF03739 Lipopolysaccharide export system permease LptF/LptG NO935_20060 PF02789 Cytosol aminopeptidase family, N-terminal domain NO935_20060 PF00883 Cytosol aminopeptidase family, catalytic domain NO935_20075 PF08264 Anticodon-binding domain of tRNA NO935_20075 PF10458 Valyl tRNA synthetase tRNA binding arm NO935_20075 PF00133 tRNA synthetases class I (I, L, M and V) NO935_20105 PF05598 Transposase domain (DUF772) NO935_20105 PF01609 Transposase DDE domain NO935_20120 PF01464 Transglycosylase SLT domain NO935_20120 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain NO935_20130 PF01609 Transposase DDE domain NO935_20130 PF05598 Transposase domain (DUF772) NO935_20160 PF01066 CDP-alcohol phosphatidyltransferase NO935_20170 PF03129 Anticodon binding domain NO935_20170 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NO935_20170 PF04073 Aminoacyl-tRNA editing domain NO935_20175 PF00816 H-NS histone family NO935_20185 PF02405 Permease MlaE NO935_20190 PF00005 ABC transporter NO935_20195 PF03886 ABC-type transport auxiliary lipoprotein component NO935_20195 PF02470 MlaD protein NO935_20215 PF14307 Glycosyltransferase WbsX NO935_20215 PF05045 Rhamnan synthesis protein F NO935_20220 PF01144 Coenzyme A transferase NO935_20225 PF01144 Coenzyme A transferase NO935_20230 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NO935_20230 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NO935_20230 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NO935_20230 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NO935_20235 PF00483 Nucleotidyl transferase NO935_20235 PF01050 Mannose-6-phosphate isomerase NO935_20240 PF04321 RmlD substrate binding domain NO935_20245 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase NO935_20250 PF00483 Nucleotidyl transferase NO935_20255 PF16363 GDP-mannose 4,6 dehydratase NO935_20260 PF01012 Electron transfer flavoprotein domain NO935_20265 PF00766 Electron transfer flavoprotein FAD-binding domain NO935_20265 PF01012 Electron transfer flavoprotein domain NO935_20275 PF00005 ABC transporter NO935_20285 PF00872 Transposase, Mutator family NO935_20315 PF01370 NAD dependent epimerase/dehydratase family NO935_20325 PF01053 Cys/Met metabolism PLP-dependent enzyme NO935_20330 PF00291 Pyridoxal-phosphate dependent enzyme NO935_20330 PF00571 CBS domain NO935_20350 PF00437 Type II/IV secretion system protein NO935_20355 PF02798 Glutathione S-transferase, N-terminal domain NO935_20355 PF14497 Glutathione S-transferase, C-terminal domain NO935_20365 PF00270 DEAD/DEAH box helicase NO935_20365 PF00271 Helicase conserved C-terminal domain NO935_20370 PF01242 6-pyruvoyl tetrahydropterin synthase NO935_20385 PF13185 GAF domain NO935_20395 PF13419 Haloacid dehalogenase-like hydrolase NO935_20400 PF00817 impB/mucB/samB family NO935_20400 PF11799 impB/mucB/samB family C-terminal domain NO935_20405 PF07977 FabA-like domain NO935_20410 PF02801 Beta-ketoacyl synthase, C-terminal domain NO935_20410 PF00109 Beta-ketoacyl synthase, N-terminal domain NO935_20420 PF01432 Peptidase family M3 NO935_20435 PF07732 Multicopper oxidase NO935_20435 PF00394 Multicopper oxidase NO935_20435 PF07731 Multicopper oxidase NO935_20440 PF05275 Copper resistance protein B precursor (CopB) NO935_20445 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NO935_20470 PF01380 SIS domain NO935_20475 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NO935_20510 PF14602 Hexapeptide repeat of succinyl-transferase NO935_20510 PF00132 Bacterial transferase hexapeptide (six repeats) NO935_20510 PF12804 MobA-like NTP transferase domain NO935_20520 PF01817 Chorismate mutase type II NO935_20525 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain NO935_20530 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NO935_20530 PF02874 ATP synthase alpha/beta family, beta-barrel domain NO935_20535 PF00231 ATP synthase NO935_20540 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NO935_20540 PF02874 ATP synthase alpha/beta family, beta-barrel domain NO935_20540 PF00306 ATP synthase alpha/beta chain, C terminal domain NO935_20545 PF00213 ATP synthase delta (OSCP) subunit NO935_20550 PF00430 ATP synthase B/B' CF(0) NO935_20555 PF00137 ATP synthase subunit C NO935_20560 PF00119 ATP synthase A chain NO935_20580 PF07992 Pyridine nucleotide-disulphide oxidoreductase NO935_20580 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NO935_20590 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NO935_20590 PF00364 Biotin-requiring enzyme NO935_20590 PF02817 e3 binding domain NO935_20615 PF03180 NLPA lipoprotein NO935_20620 PF00528 Binding-protein-dependent transport system inner membrane component NO935_20625 PF00005 ABC transporter NO935_20625 PF09383 NIL domain NO935_20630 PF00892 EamA-like transporter family NO935_20635 PF04461 Protein of unknown function (DUF520) NO935_20665 PF13419 Haloacid dehalogenase-like hydrolase NO935_20670 PF00849 RNA pseudouridylate synthase NO935_20670 PF01479 S4 domain NO935_20675 PF05175 Methyltransferase small domain NO935_20675 PF08468 Methyltransferase small domain N-terminal NO935_20690 PF07995 Glucose / Sorbosone dehydrogenase NO935_20705 PF00989 PAS fold NO935_20705 PF00512 His Kinase A (phospho-acceptor) domain NO935_20705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NO935_20725 PF01168 Alanine racemase, N-terminal domain NO935_20725 PF00842 Alanine racemase, C-terminal domain NO935_20730 PF01266 FAD dependent oxidoreductase NO935_20745 PF01641 SelR domain NO935_20755 PF01618 MotA/TolQ/ExbB proton channel family NO935_20760 PF00691 OmpA family NO935_20760 PF13677 Membrane MotB of proton-channel complex MotA/MotB NO935_20780 PF00072 Response regulator receiver domain NO935_20780 PF00486 Transcriptional regulatory protein, C terminal NO935_20785 PF08448 PAS fold NO935_20785 PF13188 PAS domain NO935_20785 PF00072 Response regulator receiver domain NO935_20785 PF00512 His Kinase A (phospho-acceptor) domain NO935_20785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NO935_20795 PF00082 Subtilase family NO935_20795 PF04151 Bacterial pre-peptidase C-terminal domain NO935_20815 PF01061 ABC-2 type transporter NO935_20820 PF00005 ABC transporter NO935_20825 PF00999 Sodium/hydrogen exchanger family NO935_20835 PF02469 Fasciclin domain NO935_20845 PF03167 Uracil DNA glycosylase superfamily NO935_20855 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase NO935_20865 PF03358 NADPH-dependent FMN reductase NO935_20870 PF00248 Aldo/keto reductase family NO935_20880 PF01431 Peptidase family M13 NO935_20880 PF05649 Peptidase family M13 NO935_20900 PF13520 Amino acid permease NO935_20965 PF02954 Bacterial regulatory protein, Fis family NO935_20965 PF00072 Response regulator receiver domain NO935_20965 PF00158 Sigma-54 interaction domain NO935_20975 PF01654 Cytochrome bd terminal oxidase subunit I NO935_20980 PF02322 Cytochrome bd terminal oxidase subunit II NO935_21010 PF03091 CutA1 divalent ion tolerance protein NO935_21015 PF11412 Disulphide bond corrector protein DsbC NO935_21015 PF02683 Cytochrome C biogenesis protein transmembrane region NO935_21020 PF01220 Dehydroquinase class II NO935_21025 PF00364 Biotin-requiring enzyme NO935_21035 PF02785 Biotin carboxylase C-terminal domain NO935_21035 PF00289 Biotin carboxylase, N-terminal domain NO935_21035 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NO935_21065 PF01381 Helix-turn-helix NO935_21075 PF02954 Bacterial regulatory protein, Fis family NO935_21125 PF01609 Transposase DDE domain NO935_21125 PF05598 Transposase domain (DUF772) NO935_21145 PF01609 Transposase DDE domain NO935_21145 PF05598 Transposase domain (DUF772) NO935_21150 PF13018 Extended Signal Peptide of Type V secretion system NO935_21150 PF05594 Haemagluttinin repeat NO935_21150 PF13332 Hemagglutinin repeat NO935_21150 PF05860 haemagglutination activity domain NO935_21150 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain NO935_21155 PF08845 Toxin SymE, type I toxin-antitoxin system NO935_21165 PF15605 Bacterial toxin 28 NO935_21165 PF13332 Hemagglutinin repeat NO935_21165 PF05860 haemagglutination activity domain NO935_21165 PF04829 Pre-toxin domain with VENN motif NO935_21175 PF04829 Pre-toxin domain with VENN motif NO935_21175 PF13018 Extended Signal Peptide of Type V secretion system NO935_21175 PF13332 Hemagglutinin repeat NO935_21175 PF05860 haemagglutination activity domain NO935_21180 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB NO935_21180 PF17287 POTRA domain NO935_21180 PF08479 POTRA domain, ShlB-type NO935_21220 PF02142 MGS-like domain NO935_21220 PF01808 AICARFT/IMPCHase bienzyme NO935_21230 PF02844 Phosphoribosylglycinamide synthetase, N domain NO935_21230 PF02843 Phosphoribosylglycinamide synthetase, C domain NO935_21230 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NO935_21235 PF12704 MacB-like periplasmic core domain NO935_21235 PF02687 FtsX-like permease family NO935_21235 PF00005 ABC transporter NO935_21245 PF12805 FUSC-like inner membrane protein yccS NO935_21260 PF07690 Major Facilitator Superfamily NO935_21275 PF03186 CobD/Cbib protein NO935_21275 PF17113 Regulatory signalling modulator protein AmpE NO935_21280 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain NO935_21280 PF09297 NADH pyrophosphatase zinc ribbon domain NO935_21280 PF00293 NUDIX domain NO935_21290 PF01521 Iron-sulphur cluster biosynthesis NO935_21310 PF00072 Response regulator receiver domain NO935_21310 PF00486 Transcriptional regulatory protein, C terminal NO935_21315 PF00672 HAMP domain NO935_21315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NO935_21315 PF00512 His Kinase A (phospho-acceptor) domain NO935_21315 PF01627 Hpt domain NO935_21315 PF00072 Response regulator receiver domain NO935_21315 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NO935_21350 PF00579 tRNA synthetases class I (W and Y) NO935_21355 PF01551 Peptidase family M23 NO935_21355 PF04225 Opacity-associated protein A LysM-like domain NO935_21360 PF03702 Anhydro-N-acetylmuramic acid kinase NO935_21370 PF07690 Major Facilitator Superfamily NO935_21375 PF03372 Endonuclease/Exonuclease/phosphatase family NO935_21380 PF00156 Phosphoribosyl transferase domain NO935_21390 PF13614 AAA domain NO935_21395 PF02195 ParB-like nuclease domain NO935_21395 PF17762 HTH domain found in ParB protein NO935_21405 PF01370 NAD dependent epimerase/dehydratase family NO935_21410 PF00535 Glycosyl transferase family 2 NO935_21425 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NO935_21425 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NO935_21425 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NO935_21425 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NO935_21430 PF00692 dUTPase NO935_21435 PF04127 DNA / pantothenate metabolism flavoprotein NO935_21435 PF02441 Flavoprotein NO935_21440 PF04002 RadC-like JAB domain NO935_21445 PF00750 tRNA synthetases class I (R) NO935_21445 PF05746 DALR anticodon binding domain NO935_21445 PF03485 Arginyl tRNA synthetase N terminal domain NO935_21460 PF00106 short chain dehydrogenase NO935_21485 PF02627 Carboxymuconolactone decarboxylase family NO935_21490 PF12146 Serine aminopeptidase, S33 NO935_21495 PF00206 Lyase NO935_21495 PF10397 Adenylosuccinate lyase C-terminus NO935_21510 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal NO935_21510 PF00775 Dioxygenase NO935_21515 PF02803 Thiolase, C-terminal domain NO935_21515 PF00108 Thiolase, N-terminal domain NO935_21550 PF00268 Ribonucleotide reductase, small chain NO935_21555 PF00317 Ribonucleotide reductase, all-alpha domain NO935_21555 PF02867 Ribonucleotide reductase, barrel domain NO935_21555 PF03477 ATP cone domain NO935_21565 PF13607 Succinyl-CoA ligase like flavodoxin domain NO935_21565 PF13380 CoA binding domain NO935_21565 PF00583 Acetyltransferase (GNAT) family NO935_21575 PF03448 MgtE intracellular N domain NO935_21575 PF00571 CBS domain NO935_21575 PF01769 Divalent cation transporter NO935_21580 PF00999 Sodium/hydrogen exchanger family NO935_21580 PF02254 TrkA-N domain NO935_21590 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain NO935_21590 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain NO935_21595 PF00723 Glycosyl hydrolases family 15 NO935_21610 PF05166 YcgL domain NO935_21615 PF00109 Beta-ketoacyl synthase, N-terminal domain NO935_21615 PF02801 Beta-ketoacyl synthase, C-terminal domain NO935_21625 PF00535 Glycosyl transferase family 2 NO935_21650 PF00155 Aminotransferase class I and II NO935_21655 PF06968 Biotin and Thiamin Synthesis associated domain NO935_21655 PF04055 Radical SAM superfamily NO935_21665 PF01040 UbiA prenyltransferase family NO935_21675 PF01594 AI-2E family transporter NO935_21685 PF02789 Cytosol aminopeptidase family, N-terminal domain NO935_21685 PF00883 Cytosol aminopeptidase family, catalytic domain NO935_21695 PF08281 Sigma-70, region 4 NO935_21695 PF04542 Sigma-70 region 2 NO935_21700 PF00199 Catalase NO935_21720 PF00892 EamA-like transporter family NO935_21745 PF00753 Metallo-beta-lactamase superfamily NO935_21750 PF00579 tRNA synthetases class I (W and Y) NO935_21755 PF05532 CsbD-like NO935_21770 PF00491 Arginase family NO935_21790 PF02223 Thymidylate kinase NO935_21810 PF03309 Type III pantothenate kinase NO935_21815 PF08279 HTH domain NO935_21815 PF03099 Biotin/lipoate A/B protein ligase family NO935_21815 PF02237 Biotin protein ligase C terminal domain NO935_21845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NO935_21850 PF00486 Transcriptional regulatory protein, C terminal NO935_21850 PF00072 Response regulator receiver domain NO935_21860 PF01207 Dihydrouridine synthase (Dus) NO935_21880 PF06628 Catalase-related immune-responsive NO935_21880 PF00199 Catalase NO935_21900 PF06733 DEAD_2 NO935_21900 PF13307 Helicase C-terminal domain NO935_21915 PF08501 Shikimate dehydrogenase substrate binding domain NO935_21915 PF01488 Shikimate / quinate 5-dehydrogenase NO935_21915 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NO935_21930 PF00175 Oxidoreductase NAD-binding domain NO935_21930 PF00258 Flavodoxin NO935_21930 PF00667 FAD binding domain NO935_21940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NO935_21940 PF03466 LysR substrate binding domain NO935_21955 PF00490 Delta-aminolevulinic acid dehydratase NO935_21980 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region NO935_21980 PF00326 Prolyl oligopeptidase family NO935_21985 PF02798 Glutathione S-transferase, N-terminal domain NO935_21985 PF00043 Glutathione S-transferase, C-terminal domain NO935_22005 PF04820 Tryptophan halogenase NO935_22020 PF00005 ABC transporter NO935_22030 PF01381 Helix-turn-helix NO935_22045 PF02583 Metal-sensitive transcriptional repressor NO935_22050 PF01545 Cation efflux family NO935_22055 PF01383 CpcD/allophycocyanin linker domain NO935_22055 PF00175 Oxidoreductase NAD-binding domain NO935_22060 PF00005 ABC transporter NO935_22065 PF01061 ABC-2 type transporter NO935_22075 PF08546 Ketopantoate reductase PanE/ApbA C terminal NO935_22075 PF02558 Ketopantoate reductase PanE/ApbA NO935_22140 PF01820 D-ala D-ala ligase N-terminus NO935_22140 PF07478 D-ala D-ala ligase C-terminus NO935_22150 PF03109 ABC1 family NO935_22160 PF00849 RNA pseudouridylate synthase NO935_22170 PF00472 RF-1 domain NO935_22190 PF01432 Peptidase family M3 NO935_22220 PF05336 L-rhamnose mutarotase NO935_22225 PF07690 Major Facilitator Superfamily NO935_22230 PF09339 IclR helix-turn-helix domain NO935_22230 PF01614 Bacterial transcriptional regulator NO935_22240 PF02659 Putative manganese efflux pump NO935_22245 PF00512 His Kinase A (phospho-acceptor) domain NO935_22245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NO935_22255 PF06165 Glycosyltransferase family 36 NO935_22255 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain NO935_22270 PF01011 PQQ enzyme repeat NO935_22270 PF13360 PQQ-like domain NO935_22270 PF13570 PQQ-like domain NO935_22345 PF00005 ABC transporter NO935_22350 PF02405 Permease MlaE NO935_22355 PF02470 MlaD protein NO935_22360 PF05494 MlaC protein NO935_22370 PF04333 MlaA lipoprotein NO935_22390 PF06827 Zinc finger found in FPG and IleRS NO935_22390 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NO935_22390 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NO935_22440 PF13426 PAS domain NO935_22440 PF08446 PAS fold NO935_22440 PF00360 Phytochrome region NO935_22440 PF01590 GAF domain NO935_22445 PF01126 Heme oxygenase NO935_22455 PF01263 Aldose 1-epimerase NO935_22470 PF02810 SEC-C motif NO935_22480 PF00150 Cellulase (glycosyl hydrolase family 5) NO935_22490 PF00150 Cellulase (glycosyl hydrolase family 5) NO935_22500 PF00150 Cellulase (glycosyl hydrolase family 5) NO935_22505 PF00107 Zinc-binding dehydrogenase NO935_22505 PF08240 Alcohol dehydrogenase GroES-like domain NO935_22545 PF01037 Lrp/AsnC ligand binding domain NO935_22550 PF00351 Biopterin-dependent aromatic amino acid hydroxylase NO935_22590 PF00248 Aldo/keto reductase family NO935_22595 PF16884 N-terminal domain of oxidoreductase NO935_22595 PF00107 Zinc-binding dehydrogenase NO935_22600 PF00248 Aldo/keto reductase family NO935_22610 PF00849 RNA pseudouridylate synthase NO935_22620 PF08482 ATP-dependent helicase C-terminal NO935_22620 PF00270 DEAD/DEAH box helicase NO935_22620 PF04408 Helicase associated domain (HA2) NO935_22620 PF00271 Helicase conserved C-terminal domain NO935_22625 PF07308 Protein of unknown function (DUF1456) NO935_22630 PF13378 Enolase C-terminal domain-like NO935_22630 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NO935_22635 PF01557 Fumarylacetoacetate (FAA) hydrolase family NO935_22650 PF00248 Aldo/keto reductase family NO935_22685 PF00196 Bacterial regulatory proteins, luxR family NO935_22685 PF00072 Response regulator receiver domain NO935_22690 PF16177 Acetyl-coenzyme A synthetase N-terminus NO935_22690 PF00501 AMP-binding enzyme NO935_22690 PF13193 AMP-binding enzyme C-terminal domain NO935_22700 PF04341 Protein of unknown function, DUF485 NO935_22705 PF00474 Sodium:solute symporter family NO935_22720 PF03372 Endonuclease/Exonuclease/phosphatase family NO935_22730 PF01609 Transposase DDE domain NO935_22730 PF05598 Transposase domain (DUF772) NO935_22735 PF04226 Transglycosylase associated protein NO935_22740 PF01648 4'-phosphopantetheinyl transferase superfamily NO935_22745 PF09423 PhoD-like phosphatase NO935_22745 PF16655 PhoD-like phosphatase, N-terminal domain NO935_22750 PF16655 PhoD-like phosphatase, N-terminal domain NO935_22750 PF09423 PhoD-like phosphatase NO935_22755 PF02527 rRNA small subunit methyltransferase G NO935_22765 PF00830 Ribosomal L28 family NO935_22770 PF00471 Ribosomal protein L33 NO935_22775 PF04909 Amidohydrolase NO935_22780 PF04303 PrpF protein NO935_22785 PF03737 Aldolase/RraA NO935_22790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NO935_22790 PF03466 LysR substrate binding domain NO935_22795 PF13091 PLD-like domain NO935_22795 PF13396 Phospholipase_D-nuclease N-terminal NO935_22810 PF00580 UvrD/REP helicase N-terminal domain NO935_22810 PF13361 UvrD-like helicase C-terminal domain NO935_22825 PF13520 Amino acid permease NO935_22835 PF02646 RmuC family NO935_22845 PF00255 Glutathione peroxidase NO935_22860 PF04055 Radical SAM superfamily NO935_22870 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) NO935_22885 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NO935_22885 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NO935_22895 PF13180 PDZ domain NO935_22895 PF03572 Peptidase family S41 NO935_22900 PF01551 Peptidase family M23 NO935_22910 PF04389 Peptidase family M28 NO935_22955 PF02463 RecF/RecN/SMC N terminal domain NO935_22960 PF01227 GTP cyclohydrolase I NO935_22980 PF00083 Sugar (and other) transporter NO935_23055 PF05598 Transposase domain (DUF772) NO935_23065 PF13614 AAA domain NO935_23095 PF02595 Glycerate kinase family NO935_23100 PF07690 Major Facilitator Superfamily NO935_23115 PF10672 S-adenosylmethionine-dependent methyltransferase NO935_23115 PF17785 PUA-like domain NO935_23120 PF03741 Integral membrane protein TerC family NO935_23125 PF01694 Rhomboid family NO935_23130 PF03009 Glycerophosphoryl diester phosphodiesterase family NO935_23140 PF01569 PAP2 superfamily NO935_23145 PF01926 50S ribosome-binding GTPase NO935_23145 PF12631 MnmE helical domain NO935_23145 PF10396 GTP-binding protein TrmE N-terminus NO935_23150 PF01522 Polysaccharide deacetylase NO935_23155 PF02096 60Kd inner membrane protein NO935_23155 PF14849 YidC periplasmic domain NO935_23160 PF00825 Ribonuclease P NO935_23165 PF00468 Ribosomal protein L34 NO935_23190 PF12822 ECF transporter, substrate-specific component NO935_23205 PF12464 Maltose acetyltransferase NO935_23205 PF00132 Bacterial transferase hexapeptide (six repeats) NO935_23215 PF01433 Peptidase family M1 domain NO935_23215 PF11838 ERAP1-like C-terminal domain NO935_23220 PF01348 Type II intron maturase NO935_23220 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NO935_23240 PF07729 FCD domain NO935_23240 PF00392 Bacterial regulatory proteins, gntR family NO935_23270 PF00083 Sugar (and other) transporter NO935_23275 PF00083 Sugar (and other) transporter NO935_23320 PF02384 N-6 DNA Methylase NO935_23340 PF01022 Bacterial regulatory protein, arsR family NO935_23350 PF01451 Low molecular weight phosphotyrosine protein phosphatase NO935_23375 PF00589 Phage integrase family NO935_23375 PF13495 Phage integrase, N-terminal SAM-like domain NO935_23440 PF12323 Helix-turn-helix domain NO935_23440 PF01385 Probable transposase NO935_23440 PF07282 Putative transposase DNA-binding domain NO935_23495 PF00877 NlpC/P60 family NO935_23640 PF00271 Helicase conserved C-terminal domain NO935_23640 PF04851 Type III restriction enzyme, res subunit NO935_23685 PF01726 LexA DNA binding domain NO935_23685 PF00717 Peptidase S24-like NO935_23700 PF00589 Phage integrase family NO935_23700 PF14659 Phage integrase, N-terminal SAM-like domain NO935_23710 PF04226 Transglycosylase associated protein NO935_23715 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NO935_23715 PF07992 Pyridine nucleotide-disulphide oxidoreductase NO935_23725 PF07992 Pyridine nucleotide-disulphide oxidoreductase NO935_23725 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NO935_23730 PF13936 Helix-turn-helix domain NO935_23730 PF00665 Integrase core domain NO935_23740 PF01526 Tn3 transposase DDE domain NO935_23740 PF13700 Domain of unknown function (DUF4158) NO935_23750 PF00111 2Fe-2S iron-sulfur cluster binding domain NO935_23750 PF00175 Oxidoreductase NAD-binding domain NO935_23770 PF13614 AAA domain NO935_23785 PF00313 'Cold-shock' DNA-binding domain NO935_23800 PF00239 Resolvase, N terminal domain NO935_23800 PF02796 Helix-turn-helix domain of resolvase NO935_23815 PF00005 ABC transporter NO935_23815 PF02687 FtsX-like permease family NO935_23815 PF12704 MacB-like periplasmic core domain NO935_23825 PF00762 Ferrochelatase NO935_23835 PF06778 Chlorite dismutase NO935_23845 PF13936 Helix-turn-helix domain NO935_23850 PF13614 AAA domain NO935_23860 PF01555 DNA methylase NO935_23865 PF04851 Type III restriction enzyme, res subunit NO935_23900 PF00465 Iron-containing alcohol dehydrogenase NO935_23905 PF02796 Helix-turn-helix domain of resolvase NO935_23905 PF00239 Resolvase, N terminal domain