locus-tag class description ACU13_00005 PF11638 DnaA N-terminal domain ACU13_00005 PF00308 Bacterial dnaA protein ACU13_00005 PF08299 Bacterial dnaA protein helix-turn-helix ACU13_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain ACU13_00010 PF02767 DNA polymerase III beta subunit, central domain ACU13_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain ACU13_00015 PF02463 RecF/RecN/SMC N terminal domain ACU13_00020 PF01751 Toprim domain ACU13_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU13_00020 PF18053 DNA gyrase B subunit insert domain ACU13_00020 PF00986 DNA gyrase B subunit, carboxyl terminus ACU13_00020 PF00204 DNA gyrase B ACU13_00030 PF01435 Peptidase family M48 ACU13_00040 PF03544 Gram-negative bacterial TonB protein C-terminal ACU13_00045 PF01618 MotA/TolQ/ExbB proton channel family ACU13_00050 PF02472 Biopolymer transport protein ExbD/TolR ACU13_00055 PF02472 Biopolymer transport protein ExbD/TolR ACU13_00060 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ACU13_00070 PF13091 PLD-like domain ACU13_00070 PF13396 Phospholipase_D-nuclease N-terminal ACU13_00075 PF05598 Transposase domain (DUF772) ACU13_00075 PF01609 Transposase DDE domain ACU13_00090 PF08240 Alcohol dehydrogenase GroES-like domain ACU13_00090 PF00107 Zinc-binding dehydrogenase ACU13_00095 PF00150 Cellulase (glycosyl hydrolase family 5) ACU13_00100 PF00150 Cellulase (glycosyl hydrolase family 5) ACU13_00105 PF00150 Cellulase (glycosyl hydrolase family 5) ACU13_00115 PF04389 Peptidase family M28 ACU13_00125 PF01551 Peptidase family M23 ACU13_00130 PF03572 Peptidase family S41 ACU13_00130 PF13180 PDZ domain ACU13_00135 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ACU13_00135 PF01842 ACT domain ACU13_00135 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ACU13_00150 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) ACU13_00160 PF04055 Radical SAM superfamily ACU13_00165 PF05598 Transposase domain (DUF772) ACU13_00175 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ACU13_00175 PF06827 Zinc finger found in FPG and IleRS ACU13_00175 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ACU13_00200 PF04349 Periplasmic glucan biosynthesis protein, MdoG ACU13_00210 PF00265 Thymidine kinase ACU13_00215 PF00580 UvrD/REP helicase N-terminal domain ACU13_00215 PF13361 UvrD-like helicase C-terminal domain ACU13_00235 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) ACU13_00240 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ACU13_00245 PF04820 Tryptophan halogenase ACU13_00260 PF00356 Bacterial regulatory proteins, lacI family ACU13_00270 PF01553 Acyltransferase ACU13_00275 PF00550 Phosphopantetheine attachment site ACU13_00275 PF14765 Polyketide synthase dehydratase ACU13_00275 PF08659 KR domain ACU13_00275 PF02801 Beta-ketoacyl synthase, C-terminal domain ACU13_00275 PF00698 Acyl transferase domain ACU13_00275 PF00109 Beta-ketoacyl synthase, N-terminal domain ACU13_00275 PF08240 Alcohol dehydrogenase GroES-like domain ACU13_00275 PF16197 Ketoacyl-synthetase C-terminal extension ACU13_00300 PF07687 Peptidase dimerisation domain ACU13_00300 PF01546 Peptidase family M20/M25/M40 ACU13_00305 PF00266 Aminotransferase class-V ACU13_00330 PF00576 HIUase/Transthyretin family ACU13_00335 PF07308 Protein of unknown function (DUF1456) ACU13_00345 PF00270 DEAD/DEAH box helicase ACU13_00345 PF04408 Helicase associated domain (HA2) ACU13_00345 PF00271 Helicase conserved C-terminal domain ACU13_00345 PF08482 ATP-dependent helicase C-terminal ACU13_00355 PF00849 RNA pseudouridylate synthase ACU13_00365 PF00248 Aldo/keto reductase family ACU13_00370 PF00107 Zinc-binding dehydrogenase ACU13_00370 PF16884 N-terminal domain of oxidoreductase ACU13_00375 PF00248 Aldo/keto reductase family ACU13_00390 PF13340 Putative transposase of IS4/5 family (DUF4096) ACU13_00410 PF02566 OsmC-like protein ACU13_00415 PF01047 MarR family ACU13_00420 PF03969 AFG1-like ATPase ACU13_00445 PF07683 Cobalamin synthesis protein cobW C-terminal domain ACU13_00445 PF02492 CobW/HypB/UreG, nucleotide-binding domain ACU13_00490 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACU13_00490 PF02770 Acyl-CoA dehydrogenase, middle domain ACU13_00490 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACU13_00495 PF01039 Carboxyl transferase domain ACU13_00500 PF00364 Biotin-requiring enzyme ACU13_00500 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ACU13_00500 PF00289 Biotin carboxylase, N-terminal domain ACU13_00500 PF02785 Biotin carboxylase C-terminal domain ACU13_00505 PF00326 Prolyl oligopeptidase family ACU13_00520 PF05598 Transposase domain (DUF772) ACU13_00530 PF02614 Glucuronate isomerase ACU13_00535 PF00331 Glycosyl hydrolase family 10 ACU13_00535 PF03422 Carbohydrate binding module (family 6) ACU13_00535 PF00553 Cellulose binding domain ACU13_00540 PF00331 Glycosyl hydrolase family 10 ACU13_00540 PF00553 Cellulose binding domain ACU13_00540 PF03422 Carbohydrate binding module (family 6) ACU13_00565 PF04616 Glycosyl hydrolases family 43 ACU13_00590 PF00665 Integrase core domain ACU13_00590 PF13936 Helix-turn-helix domain ACU13_00595 PF00920 Dehydratase family ACU13_00600 PF03692 Putative zinc- or iron-chelating domain ACU13_00605 PF00132 Bacterial transferase hexapeptide (six repeats) ACU13_00610 PF07690 Major Facilitator Superfamily ACU13_00615 PF11871 Domain of unknown function (DUF3391) ACU13_00615 PF01966 HD domain ACU13_00635 PF00171 Aldehyde dehydrogenase family ACU13_00645 PF01494 FAD binding domain ACU13_00670 PF00355 Rieske [2Fe-2S] domain ACU13_00675 PF01144 Coenzyme A transferase ACU13_00680 PF01144 Coenzyme A transferase ACU13_00685 PF02803 Thiolase, C-terminal domain ACU13_00685 PF00108 Thiolase, N-terminal domain ACU13_00690 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal ACU13_00690 PF00775 Dioxygenase ACU13_00700 PF10397 Adenylosuccinate lyase C-terminus ACU13_00700 PF00206 Lyase ACU13_00705 PF12146 Serine aminopeptidase, S33 ACU13_00710 PF02627 Carboxymuconolactone decarboxylase family ACU13_00720 PF09339 IclR helix-turn-helix domain ACU13_00720 PF01614 Bacterial transcriptional regulator ACU13_00730 PF07859 alpha/beta hydrolase fold ACU13_00745 PF05598 Transposase domain (DUF772) ACU13_00760 PF03377 TAL effector repeat ACU13_00770 PF05598 Transposase domain (DUF772) ACU13_00790 PF01134 Glucose inhibited division protein A ACU13_00790 PF13932 GidA associated domain ACU13_00800 PF00291 Pyridoxal-phosphate dependent enzyme ACU13_00820 PF13649 Methyltransferase domain ACU13_00830 PF12697 Alpha/beta hydrolase family ACU13_00840 PF00155 Aminotransferase class I and II ACU13_00845 PF04055 Radical SAM superfamily ACU13_00845 PF06968 Biotin and Thiamin Synthesis associated domain ACU13_00850 PF00156 Phosphoribosyl transferase domain ACU13_00855 PF01040 UbiA prenyltransferase family ACU13_00870 PF05598 Transposase domain (DUF772) ACU13_00880 PF04357 TamB, inner membrane protein subunit of TAM complex ACU13_00885 PF17243 POTRA domain TamA domain 1 ACU13_00885 PF01103 Surface antigen ACU13_00890 PF00593 TonB dependent receptor ACU13_00890 PF07715 TonB-dependent Receptor Plug Domain ACU13_00895 PF05598 Transposase domain (DUF772) ACU13_00900 PF13181 Tetratricopeptide repeat ACU13_00905 PF05746 DALR anticodon binding domain ACU13_00905 PF02092 Glycyl-tRNA synthetase beta subunit ACU13_00910 PF02091 Glycyl-tRNA synthetase alpha subunit ACU13_00915 PF00437 Type II/IV secretion system protein ACU13_00915 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ACU13_00925 PF00958 GMP synthase C terminal domain ACU13_00925 PF00117 Glutamine amidotransferase class-I ACU13_00935 PF00902 Sec-independent protein translocase protein (TatC) ACU13_00940 PF02416 mttA/Hcf106 family ACU13_00945 PF02416 mttA/Hcf106 family ACU13_00955 PF00762 Ferrochelatase ACU13_00960 PF12697 Alpha/beta hydrolase family ACU13_00975 PF04381 Putative exonuclease, RdgC ACU13_00980 PF01171 PP-loop family ACU13_00990 PF00356 Bacterial regulatory proteins, lacI family ACU13_00995 PF07477 Glycosyl hydrolase family 67 C-terminus ACU13_00995 PF07488 Glycosyl hydrolase family 67 middle domain ACU13_00995 PF03648 Glycosyl hydrolase family 67 N-terminus ACU13_01005 PF13378 Enolase C-terminal domain-like ACU13_01005 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ACU13_01010 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain ACU13_01010 PF04616 Glycosyl hydrolases family 43 ACU13_01015 PF14310 Fibronectin type III-like domain ACU13_01015 PF01915 Glycosyl hydrolase family 3 C-terminal domain ACU13_01015 PF07691 PA14 domain ACU13_01015 PF00933 Glycosyl hydrolase family 3 N terminal domain ACU13_01020 PF08125 Mannitol dehydrogenase C-terminal domain ACU13_01020 PF01232 Mannitol dehydrogenase Rossmann domain ACU13_01030 PF05598 Transposase domain (DUF772) ACU13_01045 PF05819 NolX protein ACU13_01095 PF01313 Bacterial export proteins, family 3 ACU13_01100 PF00813 FliP family ACU13_01115 PF00771 FHIPEP family ACU13_01120 PF01312 FlhB HrpN YscU SpaS Family ACU13_01135 PF01514 Secretory protein of YscJ/FliF family ACU13_01150 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ACU13_01150 PF02874 ATP synthase alpha/beta family, beta-barrel domain ACU13_01150 PF18269 T3SS EscN ATPase C-terminal domain ACU13_01160 PF01311 Bacterial export proteins, family 1 ACU13_01175 PF01464 Transglycosylase SLT domain ACU13_01190 PF00924 Mechanosensitive ion channel ACU13_01190 PF12795 Mechanosensitive ion channel porin domain ACU13_01190 PF12794 Mechanosensitive ion channel inner membrane domain 1 ACU13_01205 PF03109 ABC1 family ACU13_01210 PF05661 Protein of unknown function (DUF808) ACU13_01220 PF00072 Response regulator receiver domain ACU13_01220 PF00990 Diguanylate cyclase, GGDEF domain ACU13_01225 PF08323 Starch synthase catalytic domain ACU13_01225 PF00534 Glycosyl transferases group 1 ACU13_01230 PF00128 Alpha amylase, catalytic domain ACU13_01230 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ACU13_01230 PF02806 Alpha amylase, C-terminal all-beta domain ACU13_01235 PF11941 Domain of unknown function (DUF3459) ACU13_01235 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ACU13_01235 PF00128 Alpha amylase, catalytic domain ACU13_01240 PF02446 4-alpha-glucanotransferase ACU13_01245 PF00128 Alpha amylase, catalytic domain ACU13_01255 PF00128 Alpha amylase, catalytic domain ACU13_01255 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ACU13_01260 PF13460 NAD(P)H-binding ACU13_01270 PF00665 Integrase core domain ACU13_01270 PF13936 Helix-turn-helix domain ACU13_01280 PF01609 Transposase DDE domain ACU13_01280 PF05598 Transposase domain (DUF772) ACU13_01305 PF13276 HTH-like domain ACU13_01305 PF00665 Integrase core domain ACU13_01305 PF13333 Integrase core domain ACU13_01315 PF03377 TAL effector repeat ACU13_01320 PF00665 Integrase core domain ACU13_01320 PF13333 Integrase core domain ACU13_01320 PF13276 HTH-like domain ACU13_01335 PF03377 TAL effector repeat ACU13_01365 PF13276 HTH-like domain ACU13_01365 PF13683 Integrase core domain ACU13_01370 PF01527 Transposase ACU13_01375 PF03377 TAL effector repeat ACU13_01415 PF01026 TatD related DNase ACU13_01425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACU13_01425 PF03466 LysR substrate binding domain ACU13_01430 PF07690 Major Facilitator Superfamily ACU13_01440 PF02146 Sir2 family ACU13_01450 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ACU13_01450 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ACU13_01460 PF00551 Formyl transferase ACU13_01465 PF00486 Transcriptional regulatory protein, C terminal ACU13_01465 PF00072 Response regulator receiver domain ACU13_01470 PF00512 His Kinase A (phospho-acceptor) domain ACU13_01470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU13_01470 PF00672 HAMP domain ACU13_01475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU13_01475 PF00512 His Kinase A (phospho-acceptor) domain ACU13_01475 PF00672 HAMP domain ACU13_01485 PF02677 Epoxyqueuosine reductase QueH ACU13_01490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACU13_01490 PF03466 LysR substrate binding domain ACU13_01495 PF03358 NADPH-dependent FMN reductase ACU13_01505 PF08267 Cobalamin-independent synthase, N-terminal domain ACU13_01505 PF01717 Cobalamin-independent synthase, Catalytic domain ACU13_01515 PF01638 HxlR-like helix-turn-helix ACU13_01520 PF05368 NmrA-like family ACU13_01545 PF00490 Delta-aminolevulinic acid dehydratase ACU13_01565 PF00667 FAD binding domain ACU13_01565 PF00258 Flavodoxin ACU13_01565 PF00175 Oxidoreductase NAD-binding domain ACU13_01575 PF08501 Shikimate dehydrogenase substrate binding domain ACU13_01575 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ACU13_01575 PF01488 Shikimate / quinate 5-dehydrogenase ACU13_01590 PF13307 Helicase C-terminal domain ACU13_01590 PF06733 DEAD_2 ACU13_01610 PF00199 Catalase ACU13_01610 PF06628 Catalase-related immune-responsive ACU13_01630 PF01207 Dihydrouridine synthase (Dus) ACU13_01640 PF00072 Response regulator receiver domain ACU13_01640 PF00486 Transcriptional regulatory protein, C terminal ACU13_01645 PF00672 HAMP domain ACU13_01645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU13_01645 PF00512 His Kinase A (phospho-acceptor) domain ACU13_01660 PF06167 Glucose-regulated metallo-peptidase M90 ACU13_01670 PF03099 Biotin/lipoate A/B protein ligase family ACU13_01670 PF08279 HTH domain ACU13_01670 PF02237 Biotin protein ligase C terminal domain ACU13_01675 PF03309 Type III pantothenate kinase ACU13_01690 PF02223 Thymidylate kinase ACU13_01705 PF00491 Arginase family ACU13_01720 PF05532 CsbD-like ACU13_01725 PF00579 tRNA synthetases class I (W and Y) ACU13_01730 PF00753 Metallo-beta-lactamase superfamily ACU13_01750 PF00892 EamA-like transporter family ACU13_01770 PF00199 Catalase ACU13_01785 PF02789 Cytosol aminopeptidase family, N-terminal domain ACU13_01785 PF00883 Cytosol aminopeptidase family, catalytic domain ACU13_01795 PF01594 AI-2E family transporter ACU13_01815 PF00595 PDZ domain ACU13_01825 PF00512 His Kinase A (phospho-acceptor) domain ACU13_01825 PF08521 Two-component sensor kinase N-terminal ACU13_01825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU13_01830 PF08338 Domain of unknown function (DUF1731) ACU13_01830 PF01370 NAD dependent epimerase/dehydratase family ACU13_01860 PF00440 Bacterial regulatory proteins, tetR family ACU13_01865 PF00175 Oxidoreductase NAD-binding domain ACU13_01865 PF00111 2Fe-2S iron-sulfur cluster binding domain ACU13_01865 PF00970 Oxidoreductase FAD-binding domain ACU13_01870 PF00487 Fatty acid desaturase ACU13_01875 PF00563 EAL domain ACU13_01875 PF12792 CSS motif domain associated with EAL ACU13_01885 PF13335 Magnesium chelatase, subunit ChlI C-terminal ACU13_01885 PF01078 Magnesium chelatase, subunit ChlI ACU13_01890 PF04380 Membrane fusogenic activity ACU13_01895 PF00543 Nitrogen regulatory protein P-II ACU13_01915 PF05598 Transposase domain (DUF772) ACU13_01930 PF03377 TAL effector repeat ACU13_01935 PF03377 TAL effector repeat ACU13_01940 PF01527 Transposase ACU13_01945 PF13276 HTH-like domain ACU13_01945 PF13683 Integrase core domain ACU13_01965 PF17284 Spermidine synthase tetramerisation domain ACU13_01970 PF17944 Arginine decarboxylase C-terminal helical extension ACU13_01970 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ACU13_01970 PF17810 Arginine decarboxylase helical bundle domain ACU13_01975 PF05598 Transposase domain (DUF772) ACU13_01975 PF01609 Transposase DDE domain ACU13_01985 PF01757 Acyltransferase family ACU13_01990 PF00106 short chain dehydrogenase ACU13_02005 PF03485 Arginyl tRNA synthetase N terminal domain ACU13_02005 PF05746 DALR anticodon binding domain ACU13_02005 PF00750 tRNA synthetases class I (R) ACU13_02010 PF04002 RadC-like JAB domain ACU13_02015 PF02441 Flavoprotein ACU13_02015 PF04127 DNA / pantothenate metabolism flavoprotein ACU13_02020 PF00692 dUTPase ACU13_02025 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ACU13_02025 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ACU13_02025 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ACU13_02025 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ACU13_02040 PF00535 Glycosyl transferase family 2 ACU13_02045 PF01370 NAD dependent epimerase/dehydratase family ACU13_02055 PF02195 ParB-like nuclease domain ACU13_02055 PF17762 HTH domain found in ParB protein ACU13_02060 PF13614 AAA domain ACU13_02070 PF00156 Phosphoribosyl transferase domain ACU13_02080 PF01259 SAICAR synthetase ACU13_02085 PF00226 DnaJ domain ACU13_02085 PF05099 Tellurite resistance protein TerB ACU13_02090 PF00834 Ribulose-phosphate 3 epimerase family ACU13_02095 PF00583 Acetyltransferase (GNAT) family ACU13_02100 PF00781 Diacylglycerol kinase catalytic domain ACU13_02105 PF04715 Anthranilate synthase component I, N terminal region ACU13_02105 PF00425 chorismate binding enzyme ACU13_02120 PF00117 Glutamine amidotransferase class-I ACU13_02135 PF02885 Glycosyl transferase family, helical bundle domain ACU13_02135 PF00591 Glycosyl transferase family, a/b domain ACU13_02140 PF00218 Indole-3-glycerol phosphate synthase ACU13_02150 PF00027 Cyclic nucleotide-binding domain ACU13_02150 PF00325 Bacterial regulatory proteins, crp family ACU13_02155 PF02675 S-adenosylmethionine decarboxylase ACU13_02160 PF00893 Small Multidrug Resistance protein ACU13_02165 PF03232 Ubiquinone biosynthesis protein COQ7 ACU13_02170 PF00572 Ribosomal protein L13 ACU13_02175 PF00380 Ribosomal protein S9/S16 ACU13_02190 PF00293 NUDIX domain ACU13_02200 PF00210 Ferritin-like domain ACU13_02205 PF00072 Response regulator receiver domain ACU13_02205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU13_02205 PF00672 HAMP domain ACU13_02205 PF01627 Hpt domain ACU13_02205 PF00512 His Kinase A (phospho-acceptor) domain ACU13_02205 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ACU13_02210 PF00990 Diguanylate cyclase, GGDEF domain ACU13_02210 PF03707 Bacterial signalling protein N terminal repeat ACU13_02210 PF00563 EAL domain ACU13_02230 PF01521 Iron-sulphur cluster biosynthesis ACU13_02240 PF09297 NADH pyrophosphatase zinc ribbon domain ACU13_02240 PF00293 NUDIX domain ACU13_02240 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain ACU13_02245 PF03186 CobD/Cbib protein ACU13_02245 PF17113 Regulatory signalling modulator protein AmpE ACU13_02260 PF07690 Major Facilitator Superfamily ACU13_02275 PF12805 FUSC-like inner membrane protein yccS ACU13_02285 PF00005 ABC transporter ACU13_02285 PF02687 FtsX-like permease family ACU13_02285 PF12704 MacB-like periplasmic core domain ACU13_02290 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ACU13_02290 PF02843 Phosphoribosylglycinamide synthetase, C domain ACU13_02290 PF02844 Phosphoribosylglycinamide synthetase, N domain ACU13_02295 PF01808 AICARFT/IMPCHase bienzyme ACU13_02295 PF02142 MGS-like domain ACU13_02305 PF00818 Ice nucleation protein repeat ACU13_02310 PF02954 Bacterial regulatory protein, Fis family ACU13_02320 PF01381 Helix-turn-helix ACU13_02345 PF02785 Biotin carboxylase C-terminal domain ACU13_02345 PF00289 Biotin carboxylase, N-terminal domain ACU13_02345 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ACU13_02355 PF00364 Biotin-requiring enzyme ACU13_02360 PF01220 Dehydroquinase class II ACU13_02370 PF11412 Disulphide bond corrector protein DsbC ACU13_02370 PF02683 Cytochrome C biogenesis protein transmembrane region ACU13_02375 PF03091 CutA1 divalent ion tolerance protein ACU13_02380 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ACU13_02380 PF00270 DEAD/DEAH box helicase ACU13_02380 PF17764 3′ DNA-binding domain (3′BD) ACU13_02380 PF18074 Primosomal protein N C-terminal domain ACU13_02380 PF00271 Helicase conserved C-terminal domain ACU13_02400 PF01554 MatE ACU13_02405 PF01343 Peptidase family S49 ACU13_02430 PF01300 Telomere recombination ACU13_02435 PF13368 Topoisomerase C-terminal repeat ACU13_02435 PF01131 DNA topoisomerase ACU13_02435 PF01751 Toprim domain ACU13_02445 PF07963 Prokaryotic N-terminal methylation motif ACU13_02445 PF00114 Pilin (bacterial filament) ACU13_02450 PF04361 Protein of unknown function (DUF494) ACU13_02455 PF17782 DprA winged helix domain ACU13_02455 PF02481 DNA recombination-mediator protein A ACU13_02460 PF01476 LysM domain ACU13_02465 PF01327 Polypeptide deformylase ACU13_02470 PF02911 Formyl transferase, C-terminal domain ACU13_02470 PF00551 Formyl transferase ACU13_02475 PF01029 NusB family ACU13_02475 PF01189 16S rRNA methyltransferase RsmB/F ACU13_02490 PF00535 Glycosyl transferase family 2 ACU13_02510 PF00925 GTP cyclohydrolase II ACU13_02520 PF03279 Bacterial lipid A biosynthesis acyltransferase ACU13_02525 PF02580 D-Tyr-tRNA(Tyr) deacylase ACU13_02530 PF00140 Sigma-70 factor, region 1.2 ACU13_02530 PF04545 Sigma-70, region 4 ACU13_02530 PF04546 Sigma-70, non-essential region ACU13_02530 PF03979 Sigma-70 factor, region 1.1 ACU13_02530 PF04539 Sigma-70 region 3 ACU13_02530 PF04542 Sigma-70 region 2 ACU13_02555 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region ACU13_02555 PF00326 Prolyl oligopeptidase family ACU13_02560 PF02798 Glutathione S-transferase, N-terminal domain ACU13_02560 PF00043 Glutathione S-transferase, C-terminal domain ACU13_02595 PF00005 ABC transporter ACU13_02605 PF01381 Helix-turn-helix ACU13_02615 PF02583 Metal-sensitive transcriptional repressor ACU13_02620 PF01545 Cation efflux family ACU13_02625 PF01383 CpcD/allophycocyanin linker domain ACU13_02625 PF00175 Oxidoreductase NAD-binding domain ACU13_02630 PF00005 ABC transporter ACU13_02635 PF01061 ABC-2 type transporter ACU13_02645 PF08546 Ketopantoate reductase PanE/ApbA C terminal ACU13_02645 PF02558 Ketopantoate reductase PanE/ApbA ACU13_02670 PF05598 Transposase domain (DUF772) ACU13_02670 PF01609 Transposase DDE domain ACU13_02710 PF02687 FtsX-like permease family ACU13_02710 PF12704 MacB-like periplasmic core domain ACU13_02725 PF01527 Transposase ACU13_02730 PF13406 Transglycosylase SLT domain ACU13_02745 PF05598 Transposase domain (DUF772) ACU13_02760 PF01609 Transposase DDE domain ACU13_02760 PF05598 Transposase domain (DUF772) ACU13_02765 PF05598 Transposase domain (DUF772) ACU13_02775 PF05593 RHS Repeat ACU13_02775 PF03527 RHS protein ACU13_02785 PF13683 Integrase core domain ACU13_02785 PF13276 HTH-like domain ACU13_02790 PF05598 Transposase domain (DUF772) ACU13_02800 PF08479 POTRA domain, ShlB-type ACU13_02800 PF17287 POTRA domain ACU13_02800 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ACU13_02840 PF05598 Transposase domain (DUF772) ACU13_02865 PF05598 Transposase domain (DUF772) ACU13_02875 PF01527 Transposase ACU13_02880 PF13683 Integrase core domain ACU13_02880 PF13276 HTH-like domain ACU13_02890 PF00106 short chain dehydrogenase ACU13_02925 PF07759 Protein of unknown function (DUF1615) ACU13_02935 PF00892 EamA-like transporter family ACU13_02940 PF03330 Lytic transglycolase ACU13_02955 PF05598 Transposase domain (DUF772) ACU13_02965 PF00324 Amino acid permease ACU13_02975 PF01544 CorA-like Mg2+ transporter protein ACU13_03000 PF01204 Trehalase ACU13_03030 PF03707 Bacterial signalling protein N terminal repeat ACU13_03030 PF00563 EAL domain ACU13_03030 PF00990 Diguanylate cyclase, GGDEF domain ACU13_03045 PF00916 Sulfate permease family ACU13_03045 PF01740 STAS domain ACU13_03060 PF13632 Glycosyl transferase family group 2 ACU13_03070 PF07694 5TMR of 5TMR-LYT ACU13_03070 PF06580 Histidine kinase ACU13_03075 PF04397 LytTr DNA-binding domain ACU13_03075 PF00072 Response regulator receiver domain ACU13_03080 PF03900 Porphobilinogen deaminase, C-terminal domain ACU13_03080 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ACU13_03105 PF00326 Prolyl oligopeptidase family ACU13_03105 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ACU13_03115 PF00155 Aminotransferase class I and II ACU13_03120 PF00326 Prolyl oligopeptidase family ACU13_03120 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ACU13_03125 PF04304 Protein of unknown function (DUF454) ACU13_03135 PF01678 Diaminopimelate epimerase ACU13_03145 PF00589 Phage integrase family ACU13_03145 PF02899 Phage integrase, N-terminal SAM-like domain ACU13_03150 PF00227 Proteasome subunit ACU13_03155 PF00004 ATPase family associated with various cellular activities (AAA) ACU13_03155 PF07724 AAA domain (Cdc48 subfamily) ACU13_03155 PF10431 C-terminal, D2-small domain, of ClpB protein ACU13_03170 PF13673 Acetyltransferase (GNAT) domain ACU13_03175 PF13533 Biotin-lipoyl like ACU13_03185 PF01209 ubiE/COQ5 methyltransferase family ACU13_03190 PF03707 Bacterial signalling protein N terminal repeat ACU13_03190 PF00990 Diguanylate cyclase, GGDEF domain ACU13_03190 PF00563 EAL domain ACU13_03195 PF11838 ERAP1-like C-terminal domain ACU13_03195 PF01433 Peptidase family M1 domain ACU13_03210 PF00294 pfkB family carbohydrate kinase ACU13_03220 PF04085 rod shape-determining protein MreC ACU13_03230 PF03717 Penicillin-binding Protein dimerisation domain ACU13_03230 PF00905 Penicillin binding protein transpeptidase domain ACU13_03235 PF01098 Cell cycle protein ACU13_03245 PF04717 Type VI secretion system, phage-baseplate injector ACU13_03245 PF16671 Actin cross-linking domain ACU13_03255 PF13936 Helix-turn-helix domain ACU13_03255 PF00665 Integrase core domain ACU13_03260 PF05598 Transposase domain (DUF772) ACU13_03275 PF13406 Transglycosylase SLT domain ACU13_03280 PF03330 Lytic transglycolase ACU13_03280 PF05036 Sporulation related domain ACU13_03290 PF07943 Penicillin-binding protein 5, C-terminal domain ACU13_03290 PF00768 D-alanyl-D-alanine carboxypeptidase ACU13_03300 PF04359 Protein of unknown function (DUF493) ACU13_03305 PF03099 Biotin/lipoate A/B protein ligase family ACU13_03310 PF04055 Radical SAM superfamily ACU13_03310 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family ACU13_03315 PF11818 C-terminal domain of tail specific protease (DUF3340) ACU13_03315 PF00595 PDZ domain ACU13_03315 PF03572 Peptidase family S41 ACU13_03315 PF17804 Tail specific protease N-terminal domain ACU13_03325 PF01467 Cytidylyltransferase-like ACU13_03325 PF00293 NUDIX domain ACU13_03365 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ACU13_03365 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ACU13_03370 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ACU13_03370 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ACU13_03375 PF04972 BON domain ACU13_03380 PF00360 Phytochrome region ACU13_03380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU13_03380 PF01590 GAF domain ACU13_03380 PF08446 PAS fold ACU13_03380 PF00512 His Kinase A (phospho-acceptor) domain ACU13_03385 PF00072 Response regulator receiver domain ACU13_03390 PF00512 His Kinase A (phospho-acceptor) domain ACU13_03390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU13_03395 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ACU13_03425 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ACU13_03425 PF00703 Glycosyl hydrolases family 2 ACU13_03425 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 ACU13_03425 PF16355 Domain of unknown function (DUF4982) ACU13_03425 PF02837 Glycosyl hydrolases family 2, sugar binding domain ACU13_03445 PF07690 Major Facilitator Superfamily ACU13_03450 PF00356 Bacterial regulatory proteins, lacI family ACU13_03455 PF01380 SIS domain ACU13_03460 PF01979 Amidohydrolase family ACU13_03470 PF00535 Glycosyl transferase family 2 ACU13_03475 PF14883 Hypothetical glycosyl hydrolase family 13 ACU13_03475 PF01522 Polysaccharide deacetylase ACU13_03485 PF00665 Integrase core domain ACU13_03485 PF13936 Helix-turn-helix domain ACU13_03490 PF01966 HD domain ACU13_03490 PF01743 Poly A polymerase head domain ACU13_03490 PF12627 Probable RNA and SrmB- binding site of polymerase A ACU13_03500 PF00171 Aldehyde dehydrogenase family ACU13_03525 PF00034 Cytochrome c ACU13_03530 PF01926 50S ribosome-binding GTPase ACU13_03540 PF04107 Glutamate-cysteine ligase family 2(GCS2) ACU13_03545 PF05598 Transposase domain (DUF772) ACU13_03565 PF05598 Transposase domain (DUF772) ACU13_03565 PF01609 Transposase DDE domain ACU13_03580 PF00512 His Kinase A (phospho-acceptor) domain ACU13_03580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU13_03580 PF16527 Two-component sensor protein CpxA, periplasmic domain ACU13_03580 PF00672 HAMP domain ACU13_03585 PF00486 Transcriptional regulatory protein, C terminal ACU13_03585 PF00072 Response regulator receiver domain ACU13_03595 PF02583 Metal-sensitive transcriptional repressor ACU13_03600 PF08240 Alcohol dehydrogenase GroES-like domain ACU13_03600 PF00107 Zinc-binding dehydrogenase ACU13_03610 PF00756 Putative esterase ACU13_03625 PF00005 ABC transporter ACU13_03625 PF12848 ABC transporter ACU13_03645 PF00464 Serine hydroxymethyltransferase ACU13_03655 PF03477 ATP cone domain ACU13_03665 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ACU13_03665 PF01872 RibD C-terminal domain ACU13_03670 PF01872 RibD C-terminal domain ACU13_03670 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ACU13_03680 PF00677 Lumazine binding domain ACU13_03685 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ACU13_03685 PF00925 GTP cyclohydrolase II ACU13_03690 PF00885 6,7-dimethyl-8-ribityllumazine synthase ACU13_03695 PF01029 NusB family ACU13_03700 PF00586 AIR synthase related protein, N-terminal domain ACU13_03700 PF02769 AIR synthase related protein, C-terminal domain ACU13_03720 PF03814 Potassium-transporting ATPase A subunit ACU13_03730 PF02669 K+-transporting ATPase, c chain ACU13_03735 PF00512 His Kinase A (phospho-acceptor) domain ACU13_03735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU13_03735 PF13492 GAF domain ACU13_03735 PF13493 Domain of unknown function (DUF4118) ACU13_03735 PF02702 Osmosensitive K+ channel His kinase sensor domain ACU13_03740 PF00486 Transcriptional regulatory protein, C terminal ACU13_03740 PF00072 Response regulator receiver domain ACU13_03745 PF02913 FAD linked oxidases, C-terminal domain ACU13_03745 PF01565 FAD binding domain ACU13_03750 PF04307 LexA-binding, inner membrane-associated putative hydrolase ACU13_03755 PF02021 Uncharacterised protein family UPF0102 ACU13_03765 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ACU13_03785 PF02381 MraZ protein, putative antitoxin-like ACU13_03790 PF01795 MraW methylase family ACU13_03795 PF04999 Cell division protein FtsL ACU13_03800 PF00905 Penicillin binding protein transpeptidase domain ACU13_03800 PF03717 Penicillin-binding Protein dimerisation domain ACU13_03805 PF02875 Mur ligase family, glutamate ligase domain ACU13_03805 PF08245 Mur ligase middle domain ACU13_03805 PF01225 Mur ligase family, catalytic domain ACU13_03810 PF08245 Mur ligase middle domain ACU13_03810 PF01225 Mur ligase family, catalytic domain ACU13_03810 PF02875 Mur ligase family, glutamate ligase domain ACU13_03815 PF00953 Glycosyl transferase family 4 ACU13_03820 PF01098 Cell cycle protein ACU13_03825 PF04101 Glycosyltransferase family 28 C-terminal domain ACU13_03825 PF03033 Glycosyltransferase family 28 N-terminal domain ACU13_03830 PF02875 Mur ligase family, glutamate ligase domain ACU13_03830 PF08245 Mur ligase middle domain ACU13_03830 PF01225 Mur ligase family, catalytic domain ACU13_03835 PF07478 D-ala D-ala ligase C-terminus ACU13_03835 PF01820 D-ala D-ala ligase N-terminus ACU13_03840 PF08478 POTRA domain, FtsQ-type ACU13_03840 PF03799 Cell division protein FtsQ ACU13_03845 PF02491 SHS2 domain inserted in FTSA ACU13_03850 PF12327 FtsZ family, C-terminal domain ACU13_03850 PF00091 Tubulin/FtsZ family, GTPase domain ACU13_03855 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ACU13_03865 PF01476 LysM domain ACU13_03865 PF01551 Peptidase family M23 ACU13_03870 PF07517 SecA DEAD-like domain ACU13_03870 PF07516 SecA Wing and Scaffold domain ACU13_03870 PF01043 SecA preprotein cross-linking domain ACU13_03870 PF02810 SEC-C motif ACU13_03880 PF00293 NUDIX domain ACU13_03890 PF02219 Methylenetetrahydrofolate reductase ACU13_03900 PF16197 Ketoacyl-synthetase C-terminal extension ACU13_03900 PF08240 Alcohol dehydrogenase GroES-like domain ACU13_03900 PF00109 Beta-ketoacyl synthase, N-terminal domain ACU13_03900 PF02801 Beta-ketoacyl synthase, C-terminal domain ACU13_03900 PF00698 Acyl transferase domain ACU13_03900 PF08659 KR domain ACU13_03900 PF00550 Phosphopantetheine attachment site ACU13_03900 PF14765 Polyketide synthase dehydratase ACU13_03900 PF00107 Zinc-binding dehydrogenase ACU13_03905 PF09286 Pro-kumamolisin, activation domain ACU13_03905 PF00082 Subtilase family ACU13_03915 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ACU13_03950 PF13649 Methyltransferase domain ACU13_03955 PF05221 S-adenosyl-L-homocysteine hydrolase ACU13_03955 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ACU13_03965 PF00311 Phosphoenolpyruvate carboxylase ACU13_03975 PF01389 OmpA-like transmembrane domain ACU13_03975 PF00691 OmpA family ACU13_03990 PF00328 Histidine phosphatase superfamily (branch 2) ACU13_03995 PF02773 S-adenosylmethionine synthetase, C-terminal domain ACU13_03995 PF02772 S-adenosylmethionine synthetase, central domain ACU13_03995 PF00438 S-adenosylmethionine synthetase, N-terminal domain ACU13_04010 PF01207 Dihydrouridine synthase (Dus) ACU13_04025 PF00294 pfkB family carbohydrate kinase ACU13_04030 PF07670 Nucleoside recognition ACU13_04030 PF01773 Na+ dependent nucleoside transporter N-terminus ACU13_04030 PF07662 Na+ dependent nucleoside transporter C-terminus ACU13_04045 PF00248 Aldo/keto reductase family ACU13_04080 PF02668 Taurine catabolism dioxygenase TauD, TfdA family ACU13_04090 PF00005 ABC transporter ACU13_04095 PF13472 GDSL-like Lipase/Acylhydrolase family ACU13_04100 PF00486 Transcriptional regulatory protein, C terminal ACU13_04100 PF00072 Response regulator receiver domain ACU13_04105 PF00512 His Kinase A (phospho-acceptor) domain ACU13_04105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU13_04105 PF08521 Two-component sensor kinase N-terminal ACU13_04115 PF01219 Prokaryotic diacylglycerol kinase ACU13_04135 PF01790 Prolipoprotein diacylglyceryl transferase ACU13_04140 PF00303 Thymidylate synthase ACU13_04150 PF00186 Dihydrofolate reductase ACU13_04155 PF00149 Calcineurin-like phosphoesterase ACU13_04160 PF04379 ApaG domain ACU13_04165 PF00398 Ribosomal RNA adenine dimethylase ACU13_04170 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ACU13_04175 PF00639 PPIC-type PPIASE domain ACU13_04175 PF09312 SurA N-terminal domain ACU13_04180 PF03968 OstA-like protein ACU13_04180 PF04453 LPS transport system D ACU13_04185 PF00850 Histone deacetylase domain ACU13_04190 PF01923 Cobalamin adenosyltransferase ACU13_04200 PF01494 FAD binding domain ACU13_04205 PF01494 FAD binding domain ACU13_04230 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ACU13_04235 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit ACU13_04235 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ACU13_04240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACU13_04240 PF03466 LysR substrate binding domain ACU13_04245 PF00501 AMP-binding enzyme ACU13_04245 PF13193 AMP-binding enzyme C-terminal domain ACU13_04250 PF00171 Aldehyde dehydrogenase family ACU13_04255 PF00378 Enoyl-CoA hydratase/isomerase ACU13_04275 PF08450 SMP-30/Gluconolactonase/LRE-like region ACU13_04280 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ACU13_04280 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ACU13_04285 PF01728 FtsJ-like methyltransferase ACU13_04285 PF18125 RlmM ferredoxin-like domain ACU13_04300 PF00892 EamA-like transporter family ACU13_04305 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ACU13_04305 PF00749 tRNA synthetases class I (E and Q), catalytic domain ACU13_04325 PF00072 Response regulator receiver domain ACU13_04325 PF00990 Diguanylate cyclase, GGDEF domain ACU13_04330 PF00196 Bacterial regulatory proteins, luxR family ACU13_04330 PF00072 Response regulator receiver domain ACU13_04340 PF01625 Peptide methionine sulfoxide reductase ACU13_04345 PF00923 Transaldolase/Fructose-6-phosphate aldolase ACU13_04355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACU13_04355 PF03466 LysR substrate binding domain ACU13_04360 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACU13_04360 PF13192 Thioredoxin domain ACU13_04365 PF00578 AhpC/TSA family ACU13_04365 PF10417 C-terminal domain of 1-Cys peroxiredoxin ACU13_04370 PF05175 Methyltransferase small domain ACU13_04370 PF17827 PrmC N-terminal domain ACU13_04385 PF00561 alpha/beta hydrolase fold ACU13_04395 PF00293 NUDIX domain ACU13_04400 PF01367 5'-3' exonuclease, C-terminal SAM fold ACU13_04400 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ACU13_04400 PF01612 3'-5' exonuclease ACU13_04400 PF00476 DNA polymerase family A ACU13_04415 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch ACU13_04415 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ACU13_04415 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ACU13_04440 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch ACU13_04445 PF02233 NAD(P) transhydrogenase beta subunit ACU13_04465 PF01063 Amino-transferase class IV ACU13_04470 PF00082 Subtilase family ACU13_04470 PF04151 Bacterial pre-peptidase C-terminal domain ACU13_04475 PF04073 Aminoacyl-tRNA editing domain ACU13_04500 PF03358 NADPH-dependent FMN reductase ACU13_04505 PF03631 Virulence factor BrkB ACU13_04510 PF08534 Redoxin ACU13_04515 PF00708 Acylphosphatase ACU13_04525 PF03976 Polyphosphate kinase 2 (PPK2) ACU13_04530 PF00994 Probable molybdopterin binding domain ACU13_04540 PF03462 PCRF domain ACU13_04540 PF00472 RF-1 domain ACU13_04545 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ACU13_04545 PF01488 Shikimate / quinate 5-dehydrogenase ACU13_04545 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ACU13_04555 PF03550 Outer membrane lipoprotein LolB ACU13_04560 PF00288 GHMP kinases N terminal domain ACU13_04560 PF08544 GHMP kinases C terminal ACU13_04570 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ACU13_04570 PF14572 Phosphoribosyl synthetase-associated domain ACU13_04575 PF14693 Ribosomal protein TL5, C-terminal domain ACU13_04575 PF01386 Ribosomal L25p family ACU13_04580 PF01195 Peptidyl-tRNA hydrolase ACU13_04585 PF06071 Protein of unknown function (DUF933) ACU13_04585 PF01926 50S ribosome-binding GTPase ACU13_04605 PF03144 Elongation factor Tu domain 2 ACU13_04605 PF00009 Elongation factor Tu GTP binding domain ACU13_04605 PF03143 Elongation factor Tu C-terminal domain ACU13_04615 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ACU13_04620 PF02357 Transcription termination factor nusG ACU13_04620 PF00467 KOW motif ACU13_04625 PF00298 Ribosomal protein L11, RNA binding domain ACU13_04625 PF03946 Ribosomal protein L11, N-terminal domain ACU13_04630 PF00687 Ribosomal protein L1p/L10e family ACU13_04635 PF00466 Ribosomal protein L10 ACU13_04640 PF16320 Ribosomal protein L7/L12 dimerisation domain ACU13_04640 PF00542 Ribosomal protein L7/L12 C-terminal domain ACU13_04645 PF10385 RNA polymerase beta subunit external 1 domain ACU13_04645 PF00562 RNA polymerase Rpb2, domain 6 ACU13_04645 PF04565 RNA polymerase Rpb2, domain 3 ACU13_04645 PF04561 RNA polymerase Rpb2, domain 2 ACU13_04645 PF04563 RNA polymerase beta subunit ACU13_04645 PF04560 RNA polymerase Rpb2, domain 7 ACU13_04650 PF04997 RNA polymerase Rpb1, domain 1 ACU13_04650 PF04998 RNA polymerase Rpb1, domain 5 ACU13_04650 PF00623 RNA polymerase Rpb1, domain 2 ACU13_04650 PF04983 RNA polymerase Rpb1, domain 3 ACU13_04650 PF05000 RNA polymerase Rpb1, domain 4 ACU13_04655 PF00164 Ribosomal protein S12/S23 ACU13_04660 PF00177 Ribosomal protein S7p/S5e ACU13_04665 PF03764 Elongation factor G, domain IV ACU13_04665 PF00009 Elongation factor Tu GTP binding domain ACU13_04665 PF00679 Elongation factor G C-terminus ACU13_04665 PF03144 Elongation factor Tu domain 2 ACU13_04665 PF14492 Elongation Factor G, domain II ACU13_04670 PF00009 Elongation factor Tu GTP binding domain ACU13_04670 PF03144 Elongation factor Tu domain 2 ACU13_04670 PF03143 Elongation factor Tu C-terminal domain ACU13_04680 PF00338 Ribosomal protein S10p/S20e ACU13_04685 PF00297 Ribosomal protein L3 ACU13_04690 PF00573 Ribosomal protein L4/L1 family ACU13_04695 PF00276 Ribosomal protein L23 ACU13_04700 PF00181 Ribosomal Proteins L2, RNA binding domain ACU13_04700 PF03947 Ribosomal Proteins L2, C-terminal domain ACU13_04705 PF00203 Ribosomal protein S19 ACU13_04710 PF00237 Ribosomal protein L22p/L17e ACU13_04715 PF07650 KH domain ACU13_04715 PF00189 Ribosomal protein S3, C-terminal domain ACU13_04720 PF00252 Ribosomal protein L16p/L10e ACU13_04725 PF00831 Ribosomal L29 protein ACU13_04730 PF00366 Ribosomal protein S17 ACU13_04735 PF00238 Ribosomal protein L14p/L23e ACU13_04740 PF00467 KOW motif ACU13_04740 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ACU13_04745 PF00673 ribosomal L5P family C-terminus ACU13_04745 PF00281 Ribosomal protein L5 ACU13_04750 PF00253 Ribosomal protein S14p/S29e ACU13_04755 PF00410 Ribosomal protein S8 ACU13_04760 PF00347 Ribosomal protein L6 ACU13_04765 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ACU13_04770 PF03719 Ribosomal protein S5, C-terminal domain ACU13_04770 PF00333 Ribosomal protein S5, N-terminal domain ACU13_04775 PF00327 Ribosomal protein L30p/L7e ACU13_04780 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ACU13_04785 PF00344 SecY translocase ACU13_04790 PF00416 Ribosomal protein S13/S18 ACU13_04795 PF00411 Ribosomal protein S11 ACU13_04800 PF00163 Ribosomal protein S4/S9 N-terminal domain ACU13_04800 PF01479 S4 domain ACU13_04805 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ACU13_04805 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ACU13_04805 PF01000 RNA polymerase Rpb3/RpoA insert domain ACU13_04810 PF01196 Ribosomal protein L17 ACU13_04815 PF02600 Disulfide bond formation protein DsbB ACU13_04825 PF01474 Class-II DAHP synthetase family ACU13_04850 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ACU13_04855 PF00056 lactate/malate dehydrogenase, NAD binding domain ACU13_04855 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ACU13_04860 PF13276 HTH-like domain ACU13_04860 PF00665 Integrase core domain ACU13_04860 PF13333 Integrase core domain ACU13_04865 PF01527 Transposase ACU13_04880 PF03009 Glycerophosphoryl diester phosphodiesterase family ACU13_04890 PF00480 ROK family ACU13_04900 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACU13_04900 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ACU13_04905 PF00107 Zinc-binding dehydrogenase ACU13_04905 PF08240 Alcohol dehydrogenase GroES-like domain ACU13_04910 PF05736 OprF membrane domain ACU13_04910 PF00691 OmpA family ACU13_04920 PF00849 RNA pseudouridylate synthase ACU13_04930 PF00155 Aminotransferase class I and II ACU13_04940 PF00528 Binding-protein-dependent transport system inner membrane component ACU13_04945 PF00528 Binding-protein-dependent transport system inner membrane component ACU13_04950 PF00005 ABC transporter ACU13_04950 PF12857 TOBE-like domain ACU13_04950 PF17850 CysA C-terminal regulatory domain ACU13_04960 PF00107 Zinc-binding dehydrogenase ACU13_04960 PF08240 Alcohol dehydrogenase GroES-like domain ACU13_04970 PF05506 Domain of unknown function (DUF756) ACU13_04970 PF04185 Phosphoesterase family ACU13_04980 PF10459 Peptidase S46 ACU13_04985 PF00300 Histidine phosphatase superfamily (branch 1) ACU13_04990 PF02875 Mur ligase family, glutamate ligase domain ACU13_04990 PF08245 Mur ligase middle domain ACU13_05005 PF00156 Phosphoribosyl transferase domain ACU13_05010 PF04305 Protein of unknown function (DUF455) ACU13_05030 PF00149 Calcineurin-like phosphoesterase ACU13_05035 PF01569 PAP2 superfamily ACU13_05040 PF13439 Glycosyltransferase Family 4 ACU13_05040 PF00534 Glycosyl transferases group 1 ACU13_05045 PF02541 Ppx/GppA phosphatase family ACU13_05050 PF02503 Polyphosphate kinase middle domain ACU13_05050 PF13090 Polyphosphate kinase C-terminal domain 2 ACU13_05050 PF17941 Polyphosphate kinase C-terminal domain 1 ACU13_05050 PF13089 Polyphosphate kinase N-terminal domain ACU13_05055 PF00989 PAS fold ACU13_05055 PF00512 His Kinase A (phospho-acceptor) domain ACU13_05055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU13_05055 PF11808 Phosphate regulon sensor protein PhoR ACU13_05060 PF00486 Transcriptional regulatory protein, C terminal ACU13_05060 PF00072 Response regulator receiver domain ACU13_05065 PF01435 Peptidase family M48 ACU13_05065 PF13181 Tetratricopeptide repeat ACU13_05070 PF00462 Glutaredoxin ACU13_05080 PF18324 Hypothetical protein TT1725 ACU13_05080 PF00180 Isocitrate/isopropylmalate dehydrogenase ACU13_05115 PF01527 Transposase ACU13_05130 PF05698 Bacterial trigger factor protein (TF) C-terminus ACU13_05130 PF05697 Bacterial trigger factor protein (TF) ACU13_05135 PF00574 Clp protease ACU13_05140 PF07724 AAA domain (Cdc48 subfamily) ACU13_05140 PF10431 C-terminal, D2-small domain, of ClpB protein ACU13_05140 PF06689 ClpX C4-type zinc finger ACU13_05145 PF00004 ATPase family associated with various cellular activities (AAA) ACU13_05145 PF02190 ATP-dependent protease La (LON) substrate-binding domain ACU13_05145 PF05362 Lon protease (S16) C-terminal proteolytic domain ACU13_05150 PF00216 Bacterial DNA-binding protein ACU13_05175 PF05257 CHAP domain ACU13_05175 PF01476 LysM domain ACU13_05180 PF00753 Metallo-beta-lactamase superfamily ACU13_05180 PF16123 Hydroxyacylglutathione hydrolase C-terminus ACU13_05190 PF00075 RNase H ACU13_05195 PF00929 Exonuclease ACU13_05215 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ACU13_05225 PF00753 Metallo-beta-lactamase superfamily ACU13_05225 PF12706 Beta-lactamase superfamily domain ACU13_05230 PF06463 Molybdenum Cofactor Synthesis C ACU13_05230 PF04055 Radical SAM superfamily ACU13_05240 PF01967 MoaC family ACU13_05245 PF02597 ThiS family ACU13_05250 PF02391 MoaE protein ACU13_05260 PF12170 DNA polymerase III tau subunit V interacting with alpha ACU13_05260 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding ACU13_05260 PF12169 DNA polymerase III subunits gamma and tau domain III ACU13_05265 PF02575 YbaB/EbfC DNA-binding family ACU13_05270 PF13662 Toprim domain ACU13_05270 PF02132 RecR protein ACU13_05275 PF01230 HIT domain ACU13_05285 PF11992 Domain of unknown function (DUF3488) ACU13_05285 PF13559 Domain of unknown function (DUF4129) ACU13_05285 PF01841 Transglutaminase-like superfamily ACU13_05295 PF17863 AAA lid domain ACU13_05295 PF07726 ATPase family associated with various cellular activities (AAA) ACU13_05310 PF02545 Maf-like protein ACU13_05315 PF02620 Large ribosomal RNA subunit accumulation protein YceD ACU13_05320 PF01783 Ribosomal L32p protein family ACU13_05325 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ACU13_05325 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ACU13_05335 PF00698 Acyl transferase domain ACU13_05345 PF00550 Phosphopantetheine attachment site ACU13_05350 PF00109 Beta-ketoacyl synthase, N-terminal domain ACU13_05350 PF02801 Beta-ketoacyl synthase, C-terminal domain ACU13_05355 PF00425 chorismate binding enzyme ACU13_05355 PF04715 Anthranilate synthase component I, N terminal region ACU13_05360 PF02618 YceG-like family ACU13_05365 PF09115 DNA polymerase III, delta subunit, C terminal ACU13_05390 PF02954 Bacterial regulatory protein, Fis family ACU13_05390 PF06506 Propionate catabolism activator ACU13_05390 PF00158 Sigma-54 interaction domain ACU13_05400 PF00285 Citrate synthase, C-terminal domain ACU13_05405 PF00330 Aconitase family (aconitate hydratase) ACU13_05405 PF00694 Aconitase C-terminal domain ACU13_05410 PF04303 PrpF protein ACU13_05415 PF00593 TonB dependent receptor ACU13_05415 PF07715 TonB-dependent Receptor Plug Domain ACU13_05450 PF08534 Redoxin ACU13_05460 PF01556 DnaJ C terminal domain ACU13_05460 PF00226 DnaJ domain ACU13_05465 PF00072 Response regulator receiver domain ACU13_05470 PF01145 SPFH domain / Band 7 family ACU13_05470 PF12221 Bacterial membrane protein N terminal ACU13_05475 PF01145 SPFH domain / Band 7 family ACU13_05485 PF00709 Adenylosuccinate synthetase ACU13_05490 PF11838 ERAP1-like C-terminal domain ACU13_05490 PF01433 Peptidase family M1 domain ACU13_05505 PF16671 Actin cross-linking domain ACU13_05505 PF04717 Type VI secretion system, phage-baseplate injector ACU13_05540 PF01420 Type I restriction modification DNA specificity domain ACU13_05545 PF02384 N-6 DNA Methylase ACU13_05555 PF00271 Helicase conserved C-terminal domain ACU13_05555 PF08463 EcoEI R protein C-terminal ACU13_05555 PF04851 Type III restriction enzyme, res subunit ACU13_05555 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) ACU13_05570 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) ACU13_05570 PF04851 Type III restriction enzyme, res subunit ACU13_05570 PF00271 Helicase conserved C-terminal domain ACU13_05570 PF08463 EcoEI R protein C-terminal ACU13_05585 PF12161 HsdM N-terminal domain ACU13_05585 PF02384 N-6 DNA Methylase ACU13_05590 PF01420 Type I restriction modification DNA specificity domain ACU13_05625 PF00300 Histidine phosphatase superfamily (branch 1) ACU13_05625 PF13456 Reverse transcriptase-like ACU13_05630 PF01256 Carbohydrate kinase ACU13_05650 PF00717 Peptidase S24-like ACU13_05650 PF01726 LexA DNA binding domain ACU13_05665 PF07733 Bacterial DNA polymerase III alpha NTPase domain ACU13_05665 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ACU13_05665 PF14579 Helix-hairpin-helix motif ACU13_05665 PF02811 PHP domain ACU13_05680 PF03169 OPT oligopeptide transporter protein ACU13_05690 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region ACU13_05690 PF00326 Prolyl oligopeptidase family ACU13_05690 PF07676 WD40-like Beta Propeller Repeat ACU13_05700 PF12833 Helix-turn-helix domain ACU13_05700 PF02311 AraC-like ligand binding domain ACU13_05720 PF06628 Catalase-related immune-responsive ACU13_05720 PF18011 C-terminal domain found in long catalases ACU13_05720 PF00199 Catalase ACU13_05745 PF02347 Glycine cleavage system P-protein ACU13_05765 PF00664 ABC transporter transmembrane region ACU13_05765 PF00005 ABC transporter ACU13_05765 PF03412 Peptidase C39 family ACU13_05790 PF08019 Phosphoethanolamine transferase EptA/EptB ACU13_05790 PF00884 Sulfatase ACU13_05800 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase ACU13_05805 PF00072 Response regulator receiver domain ACU13_05805 PF00486 Transcriptional regulatory protein, C terminal ACU13_05810 PF00512 His Kinase A (phospho-acceptor) domain ACU13_05810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU13_05810 PF08521 Two-component sensor kinase N-terminal ACU13_05820 PF03776 Septum formation topological specificity factor MinE ACU13_05825 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ACU13_05830 PF05209 Septum formation inhibitor MinC, N-terminal domain ACU13_05830 PF03775 Septum formation inhibitor MinC, C-terminal domain ACU13_05840 PF07730 Histidine kinase ACU13_05845 PF00196 Bacterial regulatory proteins, luxR family ACU13_05845 PF00072 Response regulator receiver domain ACU13_05860 PF00730 HhH-GPD superfamily base excision DNA repair protein ACU13_05885 PF02222 ATP-grasp domain ACU13_05890 PF01527 Transposase ACU13_05925 PF04972 BON domain ACU13_05925 PF00691 OmpA family ACU13_05940 PF04717 Type VI secretion system, phage-baseplate injector ACU13_05955 PF04717 Type VI secretion system, phage-baseplate injector ACU13_06005 PF04717 Type VI secretion system, phage-baseplate injector ACU13_06005 PF16671 Actin cross-linking domain ACU13_06010 PF13276 HTH-like domain ACU13_06010 PF13683 Integrase core domain ACU13_06015 PF01527 Transposase ACU13_06030 PF16671 Actin cross-linking domain ACU13_06030 PF04717 Type VI secretion system, phage-baseplate injector ACU13_06055 PF16671 Actin cross-linking domain ACU13_06055 PF04717 Type VI secretion system, phage-baseplate injector ACU13_06110 PF07724 AAA domain (Cdc48 subfamily) ACU13_06110 PF17871 AAA lid domain ACU13_06110 PF00004 ATPase family associated with various cellular activities (AAA) ACU13_06110 PF10431 C-terminal, D2-small domain, of ClpB protein ACU13_06120 PF04717 Type VI secretion system, phage-baseplate injector ACU13_06120 PF16671 Actin cross-linking domain ACU13_06145 PF01609 Transposase DDE domain ACU13_06145 PF05598 Transposase domain (DUF772) ACU13_06160 PF05598 Transposase domain (DUF772) ACU13_06180 PF01208 Uroporphyrinogen decarboxylase (URO-D) ACU13_06190 PF01761 3-dehydroquinate synthase ACU13_06195 PF01202 Shikimate kinase ACU13_06200 PF01243 Pyridoxamine 5'-phosphate oxidase ACU13_06200 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ACU13_06210 PF04012 PspA/IM30 family ACU13_06235 PF03738 Glutathionylspermidine synthase preATP-grasp ACU13_06265 PF00376 MerR family regulatory protein ACU13_06265 PF09278 MerR, DNA binding ACU13_06300 PF12706 Beta-lactamase superfamily domain ACU13_06305 PF05598 Transposase domain (DUF772) ACU13_06305 PF01609 Transposase DDE domain ACU13_06320 PF00324 Amino acid permease ACU13_06325 PF00196 Bacterial regulatory proteins, luxR family ACU13_06330 PF00561 alpha/beta hydrolase fold ACU13_06335 PF00324 Amino acid permease ACU13_06340 PF01654 Cytochrome bd terminal oxidase subunit I ACU13_06345 PF02322 Cytochrome bd terminal oxidase subunit II ACU13_06350 PF00756 Putative esterase ACU13_06355 PF03448 MgtE intracellular N domain ACU13_06355 PF01769 Divalent cation transporter ACU13_06355 PF00571 CBS domain ACU13_06360 PF05524 PEP-utilising enzyme, N-terminal ACU13_06360 PF00391 PEP-utilising enzyme, mobile domain ACU13_06360 PF02896 PEP-utilising enzyme, TIM barrel domain ACU13_06365 PF00381 PTS HPr component phosphorylation site ACU13_06375 PF03668 P-loop ATPase protein family ACU13_06380 PF07475 HPr Serine kinase C-terminal domain ACU13_06380 PF02603 HPr Serine kinase N terminus ACU13_06385 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ACU13_06390 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ACU13_06395 PF00309 Sigma-54 factor, Activator interacting domain (AID) ACU13_06395 PF04963 Sigma-54 factor, core binding domain ACU13_06395 PF04552 Sigma-54, DNA binding domain ACU13_06400 PF00005 ABC transporter ACU13_06405 PF03968 OstA-like protein ACU13_06420 PF00571 CBS domain ACU13_06420 PF01380 SIS domain ACU13_06425 PF01722 BolA-like protein ACU13_06430 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ACU13_06450 PF00551 Formyl transferase ACU13_06465 PF02769 AIR synthase related protein, C-terminal domain ACU13_06465 PF00586 AIR synthase related protein, N-terminal domain ACU13_06475 PF01594 AI-2E family transporter ACU13_06480 PF00308 Bacterial dnaA protein ACU13_06485 PF00483 Nucleotidyl transferase ACU13_06490 PF01636 Phosphotransferase enzyme family ACU13_06510 PF07687 Peptidase dimerisation domain ACU13_06510 PF01546 Peptidase family M20/M25/M40 ACU13_06535 PF00355 Rieske [2Fe-2S] domain ACU13_06545 PF00266 Aminotransferase class-V ACU13_06550 PF01458 Uncharacterized protein family (UPF0051) ACU13_06555 PF00005 ABC transporter ACU13_06560 PF01458 Uncharacterized protein family (UPF0051) ACU13_06565 PF02082 Transcriptional regulator ACU13_06610 PF03807 NADP oxidoreductase coenzyme F420-dependent ACU13_06610 PF14748 Pyrroline-5-carboxylate reductase dimerisation ACU13_06615 PF01168 Alanine racemase, N-terminal domain ACU13_06620 PF00437 Type II/IV secretion system protein ACU13_06625 PF00437 Type II/IV secretion system protein ACU13_06640 PF13302 Acetyltransferase (GNAT) domain ACU13_06640 PF03352 Methyladenine glycosylase ACU13_06640 PF00117 Glutamine amidotransferase class-I ACU13_06640 PF13673 Acetyltransferase (GNAT) domain ACU13_06640 PF00958 GMP synthase C terminal domain ACU13_06655 PF02622 Uncharacterized ACR, COG1678 ACU13_06660 PF03652 Holliday junction resolvase ACU13_06665 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ACU13_06665 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ACU13_06670 PF02566 OsmC-like protein ACU13_06680 PF02567 Phenazine biosynthesis-like protein ACU13_06690 PF01842 ACT domain ACU13_06690 PF00696 Amino acid kinase family ACU13_06705 PF08245 Mur ligase middle domain ACU13_06720 PF05598 Transposase domain (DUF772) ACU13_06730 PF00348 Polyprenyl synthetase ACU13_06735 PF00436 Single-strand binding protein family ACU13_06740 PF00563 EAL domain ACU13_06740 PF01590 GAF domain ACU13_06740 PF00990 Diguanylate cyclase, GGDEF domain ACU13_06740 PF00360 Phytochrome region ACU13_06745 PF00109 Beta-ketoacyl synthase, N-terminal domain ACU13_06745 PF16197 Ketoacyl-synthetase C-terminal extension ACU13_06745 PF00698 Acyl transferase domain ACU13_06745 PF02801 Beta-ketoacyl synthase, C-terminal domain ACU13_06745 PF08659 KR domain ACU13_06745 PF14765 Polyketide synthase dehydratase ACU13_06745 PF08240 Alcohol dehydrogenase GroES-like domain ACU13_06745 PF00107 Zinc-binding dehydrogenase ACU13_06745 PF00550 Phosphopantetheine attachment site ACU13_06755 PF00111 2Fe-2S iron-sulfur cluster binding domain ACU13_06755 PF10518 TAT (twin-arginine translocation) pathway signal sequence ACU13_06755 PF01799 [2Fe-2S] binding domain ACU13_06760 PF03450 CO dehydrogenase flavoprotein C-terminal domain ACU13_06760 PF00941 FAD binding domain in molybdopterin dehydrogenase ACU13_06765 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ACU13_06765 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ACU13_06770 PF02625 XdhC and CoxI family ACU13_06770 PF13478 XdhC Rossmann domain ACU13_06795 PF04328 Selenoprotein, putative ACU13_06800 PF13722 5TM C-terminal transporter carbon starvation CstA ACU13_06800 PF02554 Carbon starvation protein CstA ACU13_06805 PF02678 Pirin ACU13_06805 PF05726 Pirin C-terminal cupin domain ACU13_06815 PF04717 Type VI secretion system, phage-baseplate injector ACU13_06850 PF16671 Actin cross-linking domain ACU13_06850 PF04717 Type VI secretion system, phage-baseplate injector ACU13_06895 PF02678 Pirin ACU13_06895 PF05726 Pirin C-terminal cupin domain ACU13_06905 PF04493 Endonuclease V ACU13_06910 PF00300 Histidine phosphatase superfamily (branch 1) ACU13_06915 PF13683 Integrase core domain ACU13_06915 PF13276 HTH-like domain ACU13_06920 PF01527 Transposase ACU13_06925 PF03377 TAL effector repeat ACU13_06930 PF16671 Actin cross-linking domain ACU13_06930 PF04717 Type VI secretion system, phage-baseplate injector ACU13_06940 PF13276 HTH-like domain ACU13_06940 PF00665 Integrase core domain ACU13_06940 PF13333 Integrase core domain ACU13_06945 PF03377 TAL effector repeat ACU13_06950 PF03377 TAL effector repeat ACU13_06955 PF03377 TAL effector repeat ACU13_06960 PF03377 TAL effector repeat ACU13_06965 PF03377 TAL effector repeat ACU13_06970 PF03377 TAL effector repeat ACU13_06975 PF03377 TAL effector repeat ACU13_06990 PF13333 Integrase core domain ACU13_06990 PF13276 HTH-like domain ACU13_06990 PF00665 Integrase core domain ACU13_06995 PF03377 TAL effector repeat ACU13_07010 PF01339 CheB methylesterase ACU13_07010 PF00072 Response regulator receiver domain ACU13_07015 PF03705 CheR methyltransferase, all-alpha domain ACU13_07015 PF01739 CheR methyltransferase, SAM binding domain ACU13_07020 PF00563 EAL domain ACU13_07020 PF13426 PAS domain ACU13_07020 PF00990 Diguanylate cyclase, GGDEF domain ACU13_07025 PF01584 CheW-like domain ACU13_07030 PF02203 Tar ligand binding domain homologue ACU13_07030 PF00672 HAMP domain ACU13_07030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACU13_07035 PF09078 CheY binding ACU13_07035 PF02895 Signal transducing histidine kinase, homodimeric domain ACU13_07035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU13_07035 PF01584 CheW-like domain ACU13_07035 PF01627 Hpt domain ACU13_07045 PF00270 DEAD/DEAH box helicase ACU13_07045 PF00271 Helicase conserved C-terminal domain ACU13_07045 PF03461 TRCF domain ACU13_07045 PF17757 UvrB interaction domain ACU13_07045 PF02559 CarD-like/TRCF domain ACU13_07055 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ ACU13_07080 PF00795 Carbon-nitrogen hydrolase ACU13_07090 PF00749 tRNA synthetases class I (E and Q), catalytic domain ACU13_07095 PF01475 Ferric uptake regulator family ACU13_07130 PF07715 TonB-dependent Receptor Plug Domain ACU13_07130 PF00593 TonB dependent receptor ACU13_07145 PF08240 Alcohol dehydrogenase GroES-like domain ACU13_07145 PF00107 Zinc-binding dehydrogenase ACU13_07150 PF00654 Voltage gated chloride channel ACU13_07160 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ACU13_07160 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ACU13_07210 PF00271 Helicase conserved C-terminal domain ACU13_07210 PF00270 DEAD/DEAH box helicase ACU13_07210 PF03880 DbpA RNA binding domain ACU13_07215 PF00563 EAL domain ACU13_07215 PF08448 PAS fold ACU13_07215 PF00990 Diguanylate cyclase, GGDEF domain ACU13_07220 PF00849 RNA pseudouridylate synthase ACU13_07220 PF01479 S4 domain ACU13_07235 PF03737 Aldolase/RraA ACU13_07240 PF00144 Beta-lactamase ACU13_07245 PF00999 Sodium/hydrogen exchanger family ACU13_07250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU13_07250 PF00512 His Kinase A (phospho-acceptor) domain ACU13_07250 PF00672 HAMP domain ACU13_07255 PF00072 Response regulator receiver domain ACU13_07255 PF00486 Transcriptional regulatory protein, C terminal ACU13_07260 PF02321 Outer membrane efflux protein ACU13_07275 PF00873 AcrB/AcrD/AcrF family ACU13_07285 PF00005 ABC transporter ACU13_07285 PF00664 ABC transporter transmembrane region ACU13_07305 PF00665 Integrase core domain ACU13_07305 PF13936 Helix-turn-helix domain ACU13_07345 PF00085 Thioredoxin ACU13_07355 PF00133 tRNA synthetases class I (I, L, M and V) ACU13_07355 PF08264 Anticodon-binding domain of tRNA ACU13_07355 PF13603 Leucyl-tRNA synthetase, Domain 2 ACU13_07370 PF01467 Cytidylyltransferase-like ACU13_07390 PF02590 Predicted SPOUT methyltransferase ACU13_07405 PF04402 Protein of unknown function (DUF541) ACU13_07410 PF02545 Maf-like protein ACU13_07415 PF00575 S1 RNA binding domain ACU13_07415 PF10150 Ribonuclease E/G family ACU13_07420 PF13116 Protein of unknown function ACU13_07420 PF13502 AsmA-like C-terminal region ACU13_07430 PF01523 Putative modulator of DNA gyrase ACU13_07435 PF04751 Protein of unknown function (DUF615) ACU13_07440 PF01523 Putative modulator of DNA gyrase ACU13_07455 PF05598 Transposase domain (DUF772) ACU13_07465 PF14521 Lysine-specific metallo-endopeptidase ACU13_07470 PF00348 Polyprenyl synthetase ACU13_07475 PF02609 Exonuclease VII small subunit ACU13_07480 PF09179 TilS substrate binding domain ACU13_07480 PF11734 TilS substrate C-terminal domain ACU13_07480 PF01171 PP-loop family ACU13_07485 PF00245 Alkaline phosphatase ACU13_07490 PF00375 Sodium:dicarboxylate symporter family ACU13_07510 PF00877 NlpC/P60 family ACU13_07515 PF00877 NlpC/P60 family ACU13_07520 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ACU13_07525 PF04235 Protein of unknown function (DUF418) ACU13_07530 PF01266 FAD dependent oxidoreductase ACU13_07535 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACU13_07535 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ACU13_07540 PF03377 TAL effector repeat ACU13_07550 PF01527 Transposase ACU13_07555 PF13683 Integrase core domain ACU13_07555 PF13276 HTH-like domain ACU13_07560 PF03377 TAL effector repeat ACU13_07565 PF13276 HTH-like domain ACU13_07565 PF13333 Integrase core domain ACU13_07565 PF00665 Integrase core domain ACU13_07575 PF04717 Type VI secretion system, phage-baseplate injector ACU13_07575 PF16671 Actin cross-linking domain ACU13_07580 PF03377 TAL effector repeat ACU13_07595 PF05598 Transposase domain (DUF772) ACU13_07635 PF00082 Subtilase family ACU13_07640 PF01668 SmpB protein ACU13_07645 PF03364 Polyketide cyclase / dehydrase and lipid transport ACU13_07650 PF03658 RnfH family Ubiquitin ACU13_07655 PF04355 SmpA / OmlA family ACU13_07660 PF01475 Ferric uptake regulator family ACU13_07665 PF02463 RecF/RecN/SMC N terminal domain ACU13_07670 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding ACU13_07670 PF01628 HrcA protein C terminal domain ACU13_07675 PF01025 GrpE ACU13_07680 PF00012 Hsp70 protein ACU13_07685 PF01556 DnaJ C terminal domain ACU13_07685 PF00684 DnaJ central domain ACU13_07685 PF00226 DnaJ domain ACU13_07690 PF08543 Phosphomethylpyrimidine kinase ACU13_07705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACU13_07705 PF03466 LysR substrate binding domain ACU13_07710 PF00664 ABC transporter transmembrane region ACU13_07710 PF00005 ABC transporter ACU13_07715 PF01205 Uncharacterized protein family UPF0029 ACU13_07720 PF03641 Possible lysine decarboxylase ACU13_07725 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ACU13_07725 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACU13_07730 PF02817 e3 binding domain ACU13_07730 PF00364 Biotin-requiring enzyme ACU13_07730 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ACU13_07735 PF16078 2-oxoglutarate dehydrogenase N-terminus ACU13_07735 PF16870 2-oxoglutarate dehydrogenase C-terminal ACU13_07735 PF00676 Dehydrogenase E1 component ACU13_07735 PF02779 Transketolase, pyrimidine binding domain ACU13_07745 PF08007 Cupin superfamily protein ACU13_07760 PF08328 Adenylosuccinate lyase C-terminal ACU13_07760 PF00206 Lyase ACU13_07775 PF10415 Fumarase C C-terminus ACU13_07775 PF00206 Lyase ACU13_07805 PF00005 ABC transporter ACU13_07810 PF00392 Bacterial regulatory proteins, gntR family ACU13_07820 PF00255 Glutathione peroxidase ACU13_07825 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ACU13_07825 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ACU13_07830 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ACU13_07830 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ACU13_07830 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ACU13_07835 PF04102 SlyX ACU13_07855 PF07690 Major Facilitator Superfamily ACU13_07860 PF00294 pfkB family carbohydrate kinase ACU13_07880 PF01209 ubiE/COQ5 methyltransferase family ACU13_07885 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACU13_07885 PF02770 Acyl-CoA dehydrogenase, middle domain ACU13_07885 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACU13_07905 PF17876 Cold shock domain ACU13_07905 PF08461 Ribonuclease R winged-helix domain ACU13_07905 PF08206 Ribonuclease B OB domain ACU13_07905 PF00575 S1 RNA binding domain ACU13_07905 PF00773 RNB domain ACU13_07915 PF00588 SpoU rRNA Methylase family ACU13_07915 PF08032 RNA 2'-O ribose methyltransferase substrate binding ACU13_07920 PF07694 5TMR of 5TMR-LYT ACU13_07920 PF00990 Diguanylate cyclase, GGDEF domain ACU13_07925 PF00929 Exonuclease ACU13_07935 PF01895 PhoU domain ACU13_07940 PF00005 ABC transporter ACU13_07945 PF00528 Binding-protein-dependent transport system inner membrane component ACU13_07950 PF00528 Binding-protein-dependent transport system inner membrane component ACU13_07955 PF12849 PBP superfamily domain ACU13_07960 PF12849 PBP superfamily domain ACU13_07975 PF00484 Carbonic anhydrase ACU13_07980 PF00916 Sulfate permease family ACU13_07980 PF01740 STAS domain ACU13_07985 PF00730 HhH-GPD superfamily base excision DNA repair protein ACU13_07985 PF00633 Helix-hairpin-helix motif ACU13_07985 PF10576 Iron-sulfur binding domain of endonuclease III ACU13_07995 PF00378 Enoyl-CoA hydratase/isomerase ACU13_08000 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ACU13_08000 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ACU13_08005 PF00293 NUDIX domain ACU13_08010 PF00581 Rhodanese-like domain ACU13_08050 PF02926 THUMP domain ACU13_08050 PF10672 S-adenosylmethionine-dependent methyltransferase ACU13_08050 PF01170 Putative RNA methylase family UPF0020 ACU13_08055 PF01513 ATP-NAD kinase ACU13_08070 PF00248 Aldo/keto reductase family ACU13_08080 PF00929 Exonuclease ACU13_08080 PF08411 Exonuclease C-terminal ACU13_08085 PF01494 FAD binding domain ACU13_08090 PF00266 Aminotransferase class-V ACU13_08100 PF06052 3-hydroxyanthranilic acid dioxygenase ACU13_08105 PF00484 Carbonic anhydrase ACU13_08130 PF00152 tRNA synthetases class II (D, K and N) ACU13_08130 PF01336 OB-fold nucleic acid binding domain ACU13_08135 PF01521 Iron-sulphur cluster biosynthesis ACU13_08140 PF01250 Ribosomal protein S6 ACU13_08145 PF01084 Ribosomal protein S18 ACU13_08150 PF03948 Ribosomal protein L9, C-terminal domain ACU13_08150 PF01281 Ribosomal protein L9, N-terminal domain ACU13_08155 PF02463 RecF/RecN/SMC N terminal domain ACU13_08160 PF04354 ZipA, C-terminal FtsZ-binding domain ACU13_08170 PF00533 BRCA1 C Terminus (BRCT) domain ACU13_08170 PF03120 NAD-dependent DNA ligase OB-fold domain ACU13_08170 PF01653 NAD-dependent DNA ligase adenylation domain ACU13_08170 PF12826 Helix-hairpin-helix motif ACU13_08170 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ACU13_08175 PF00152 tRNA synthetases class II (D, K and N) ACU13_08185 PF01008 Initiation factor 2 subunit family ACU13_08190 PF03989 DNA gyrase C-terminal domain, beta-propeller ACU13_08190 PF00521 DNA gyrase/topoisomerase IV, subunit A ACU13_08195 PF05598 Transposase domain (DUF772) ACU13_08215 PF05598 Transposase domain (DUF772) ACU13_08220 PF05598 Transposase domain (DUF772) ACU13_08230 PF01609 Transposase DDE domain ACU13_08230 PF05598 Transposase domain (DUF772) ACU13_08235 PF05598 Transposase domain (DUF772) ACU13_08245 PF03466 LysR substrate binding domain ACU13_08245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACU13_08280 PF05598 Transposase domain (DUF772) ACU13_08280 PF01609 Transposase DDE domain ACU13_08290 PF13936 Helix-turn-helix domain ACU13_08290 PF00665 Integrase core domain ACU13_08305 PF03377 TAL effector repeat ACU13_08310 PF13683 Integrase core domain ACU13_08310 PF13276 HTH-like domain ACU13_08320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACU13_08320 PF00672 HAMP domain ACU13_08320 PF02203 Tar ligand binding domain homologue ACU13_08335 PF01609 Transposase DDE domain ACU13_08335 PF05598 Transposase domain (DUF772) ACU13_08355 PF03918 Cytochrome C biogenesis protein ACU13_08360 PF08534 Redoxin ACU13_08365 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal ACU13_08365 PF01578 Cytochrome C assembly protein ACU13_08370 PF03100 CcmE ACU13_08375 PF04995 Heme exporter protein D (CcmD) ACU13_08380 PF01578 Cytochrome C assembly protein ACU13_08385 PF00082 Subtilase family ACU13_08395 PF04542 Sigma-70 region 2 ACU13_08395 PF08281 Sigma-70, region 4 ACU13_08405 PF00034 Cytochrome c ACU13_08420 PF05523 WxcM-like, C-terminal ACU13_08440 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ACU13_08445 PF01943 Polysaccharide biosynthesis protein ACU13_08450 PF00535 Glycosyl transferase family 2 ACU13_08465 PF08241 Methyltransferase domain ACU13_08485 PF00534 Glycosyl transferases group 1 ACU13_08485 PF13579 Glycosyl transferase 4-like domain ACU13_08500 PF00005 ABC transporter ACU13_08505 PF00664 ABC transporter transmembrane region ACU13_08505 PF00005 ABC transporter ACU13_08510 PF00083 Sugar (and other) transporter ACU13_08515 PF00296 Luciferase-like monooxygenase ACU13_08530 PF03471 Transporter associated domain ACU13_08530 PF01595 Cyclin M transmembrane N-terminal domain ACU13_08530 PF00571 CBS domain ACU13_08540 PF01384 Phosphate transporter family ACU13_08555 PF00204 DNA gyrase B ACU13_08555 PF01751 Toprim domain ACU13_08555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU13_08555 PF00986 DNA gyrase B subunit, carboxyl terminus ACU13_08565 PF06418 CTP synthase N-terminus ACU13_08565 PF00117 Glutamine amidotransferase class-I ACU13_08570 PF00793 DAHP synthetase I family ACU13_08580 PF03952 Enolase, N-terminal domain ACU13_08580 PF00113 Enolase, C-terminal TIM barrel domain ACU13_08585 PF04977 Septum formation initiator ACU13_08590 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ACU13_08595 PF02542 YgbB family ACU13_08600 PF01142 tRNA pseudouridine synthase D (TruD) ACU13_08605 PF01713 Smr domain ACU13_08610 PF01975 Survival protein SurE ACU13_08620 PF09335 SNARE associated Golgi protein ACU13_08625 PF01551 Peptidase family M23 ACU13_08625 PF01476 LysM domain ACU13_08630 PF04430 Protein of unknown function (DUF498/DUF598) ACU13_08635 PF01985 CRS1 / YhbY (CRM) domain ACU13_08640 PF01728 FtsJ-like methyltransferase ACU13_08645 PF06480 FtsH Extracellular ACU13_08645 PF17862 AAA+ lid domain ACU13_08645 PF01434 Peptidase family M41 ACU13_08645 PF00004 ATPase family associated with various cellular activities (AAA) ACU13_08650 PF00809 Pterin binding enzyme ACU13_08660 PF17209 Hfq protein ACU13_08665 PF16360 GTP-binding GTPase Middle Region ACU13_08665 PF01926 50S ribosome-binding GTPase ACU13_08665 PF13167 GTP-binding GTPase N-terminal ACU13_08670 PF02464 Competence-damaged protein ACU13_08675 PF03109 ABC1 family ACU13_08680 PF01726 LexA DNA binding domain ACU13_08680 PF00717 Peptidase S24-like ACU13_08685 PF00154 recA bacterial DNA recombination protein ACU13_08690 PF02631 RecX family ACU13_08695 PF02272 DHHA1 domain ACU13_08695 PF01411 tRNA synthetases class II (A) ACU13_08695 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ACU13_08700 PF02599 Global regulator protein family ACU13_08740 PF08460 Bacterial SH3 domain ACU13_08740 PF01551 Peptidase family M23 ACU13_08745 PF01979 Amidohydrolase family ACU13_08750 PF01809 Putative membrane protein insertion efficiency factor ACU13_08760 PF01258 Prokaryotic dksA/traR C4-type zinc finger ACU13_08775 PF02657 Fe-S metabolism associated domain ACU13_08780 PF01406 tRNA synthetases class I (C) catalytic domain ACU13_08780 PF09190 DALR domain ACU13_08790 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ACU13_08790 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ACU13_08795 PF00764 Arginosuccinate synthase ACU13_08805 PF01546 Peptidase family M20/M25/M40 ACU13_08805 PF07687 Peptidase dimerisation domain ACU13_08810 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase ACU13_08810 PF00696 Amino acid kinase family ACU13_08820 PF01118 Semialdehyde dehydrogenase, NAD binding domain ACU13_08825 PF00206 Lyase ACU13_08840 PF00696 Amino acid kinase family ACU13_08840 PF01472 PUA domain ACU13_08845 PF00171 Aldehyde dehydrogenase family ACU13_08850 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain ACU13_08850 PF02129 X-Pro dipeptidyl-peptidase (S15 family) ACU13_08870 PF02322 Cytochrome bd terminal oxidase subunit II ACU13_08875 PF01654 Cytochrome bd terminal oxidase subunit I ACU13_08880 PF01654 Cytochrome bd terminal oxidase subunit I ACU13_08885 PF00664 ABC transporter transmembrane region ACU13_08885 PF00005 ABC transporter ACU13_08890 PF00664 ABC transporter transmembrane region ACU13_08890 PF00005 ABC transporter ACU13_08900 PF00561 alpha/beta hydrolase fold ACU13_08910 PF03918 Cytochrome C biogenesis protein ACU13_08915 PF08534 Redoxin ACU13_08920 PF01578 Cytochrome C assembly protein ACU13_08920 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal ACU13_08925 PF03100 CcmE ACU13_08935 PF01578 Cytochrome C assembly protein ACU13_08940 PF03379 CcmB protein ACU13_08945 PF00005 ABC transporter ACU13_08950 PF00155 Aminotransferase class I and II ACU13_08955 PF00795 Carbon-nitrogen hydrolase ACU13_08970 PF01479 S4 domain ACU13_08970 PF00849 RNA pseudouridylate synthase ACU13_08975 PF04079 Segregation and condensation complex subunit ScpB ACU13_08980 PF02616 Segregation and condensation protein ScpA ACU13_08985 PF03795 YCII-related domain ACU13_08995 PF00356 Bacterial regulatory proteins, lacI family ACU13_09015 PF00528 Binding-protein-dependent transport system inner membrane component ACU13_09020 PF00528 Binding-protein-dependent transport system inner membrane component ACU13_09040 PF00795 Carbon-nitrogen hydrolase ACU13_09045 PF04371 Porphyromonas-type peptidyl-arginine deiminase ACU13_09055 PF00444 Ribosomal protein L36 ACU13_09060 PF02224 Cytidylate kinase ACU13_09065 PF00575 S1 RNA binding domain ACU13_09070 PF00216 Bacterial DNA-binding protein ACU13_09080 PF18073 Rubredoxin metal binding domain ACU13_09085 PF00953 Glycosyl transferase family 4 ACU13_09090 PF02719 Polysaccharide biosynthesis protein ACU13_09095 PF00483 Nucleotidyl transferase ACU13_09100 PF00999 Sodium/hydrogen exchanger family ACU13_09100 PF02254 TrkA-N domain ACU13_09115 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ACU13_09115 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ACU13_09120 PF00571 CBS domain ACU13_09120 PF00478 IMP dehydrogenase / GMP reductase domain ACU13_09125 PF00117 Glutamine amidotransferase class-I ACU13_09125 PF00958 GMP synthase C terminal domain ACU13_09125 PF02540 NAD synthase ACU13_09130 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) ACU13_09135 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus ACU13_09135 PF00361 Proton-conducting membrane transporter ACU13_09135 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ACU13_09140 PF03466 LysR substrate binding domain ACU13_09140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACU13_09155 PF03601 Conserved hypothetical protein 698 ACU13_09160 PF03466 LysR substrate binding domain ACU13_09160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACU13_09165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACU13_09165 PF03466 LysR substrate binding domain ACU13_09185 PF01566 Natural resistance-associated macrophage protein ACU13_09190 PF01325 Iron dependent repressor, N-terminal DNA binding domain ACU13_09190 PF02742 Iron dependent repressor, metal binding and dimerisation domain ACU13_09195 PF14437 MafB19-like deaminase ACU13_09200 PF00929 Exonuclease ACU13_09205 PF00924 Mechanosensitive ion channel ACU13_09205 PF05552 Conserved TM helix ACU13_09210 PF02896 PEP-utilising enzyme, TIM barrel domain ACU13_09210 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ACU13_09210 PF00391 PEP-utilising enzyme, mobile domain ACU13_09215 PF03618 Kinase/pyrophosphorylase ACU13_09235 PF01066 CDP-alcohol phosphatidyltransferase ACU13_09245 PF00561 alpha/beta hydrolase fold ACU13_09260 PF01266 FAD dependent oxidoreductase ACU13_09260 PF00355 Rieske [2Fe-2S] domain ACU13_09270 PF16921 Tex protein YqgF-like domain ACU13_09270 PF09371 Tex-like protein N-terminal domain ACU13_09270 PF17674 HHH domain ACU13_09270 PF00575 S1 RNA binding domain ACU13_09275 PF09308 LuxQ, periplasmic ACU13_09275 PF00072 Response regulator receiver domain ACU13_09275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU13_09275 PF00512 His Kinase A (phospho-acceptor) domain ACU13_09320 PF05598 Transposase domain (DUF772) ACU13_09360 PF00034 Cytochrome c ACU13_09370 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ACU13_09375 PF00873 AcrB/AcrD/AcrF family ACU13_09380 PF00873 AcrB/AcrD/AcrF family ACU13_09385 PF13936 Helix-turn-helix domain ACU13_09385 PF00665 Integrase core domain ACU13_09395 PF01081 KDPG and KHG aldolase ACU13_09400 PF00920 Dehydratase family ACU13_09405 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ACU13_09410 PF02685 Glucokinase ACU13_09415 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ACU13_09415 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ACU13_09420 PF00005 ABC transporter ACU13_09420 PF17912 MalK OB fold domain ACU13_09425 PF01571 Aminomethyltransferase folate-binding domain ACU13_09430 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ACU13_09435 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ACU13_09440 PF02910 Fumarate reductase flavoprotein C-term ACU13_09440 PF00890 FAD binding domain ACU13_09450 PF13085 2Fe-2S iron-sulfur cluster binding domain ACU13_09455 PF03937 Flavinator of succinate dehydrogenase ACU13_09465 PF02687 FtsX-like permease family ACU13_09465 PF12704 MacB-like periplasmic core domain ACU13_09470 PF00005 ABC transporter ACU13_09485 PF00753 Metallo-beta-lactamase superfamily ACU13_09485 PF03772 Competence protein ACU13_09490 PF01618 MotA/TolQ/ExbB proton channel family ACU13_09500 PF00664 ABC transporter transmembrane region ACU13_09500 PF00005 ABC transporter ACU13_09505 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ACU13_09510 PF02348 Cytidylyltransferase ACU13_09515 PF01451 Low molecular weight phosphotyrosine protein phosphatase ACU13_09525 PF02151 UvrB/uvrC motif ACU13_09525 PF01541 GIY-YIG catalytic domain ACU13_09525 PF08459 UvrC Helix-hairpin-helix N-terminal ACU13_09530 PF01066 CDP-alcohol phosphatidyltransferase ACU13_09570 PF00501 AMP-binding enzyme ACU13_09570 PF00668 Condensation domain ACU13_09570 PF00550 Phosphopantetheine attachment site ACU13_09570 PF00975 Thioesterase domain ACU13_09570 PF13193 AMP-binding enzyme C-terminal domain ACU13_09575 PF00975 Thioesterase domain ACU13_09575 PF00550 Phosphopantetheine attachment site ACU13_09575 PF00668 Condensation domain ACU13_09575 PF13193 AMP-binding enzyme C-terminal domain ACU13_09575 PF00501 AMP-binding enzyme ACU13_09580 PF01648 4'-phosphopantetheinyl transferase superfamily ACU13_09580 PF17837 4'-phosphopantetheinyl transferase N-terminal domain ACU13_09590 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ACU13_09590 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ACU13_09590 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ACU13_09600 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ACU13_09615 PF00072 Response regulator receiver domain ACU13_09615 PF00196 Bacterial regulatory proteins, luxR family ACU13_09620 PF00575 S1 RNA binding domain ACU13_09620 PF12111 Polyribonucleotide phosphorylase C terminal ACU13_09620 PF10150 Ribonuclease E/G family ACU13_09625 PF01479 S4 domain ACU13_09625 PF00849 RNA pseudouridylate synthase ACU13_09630 PF11737 Protein of unknown function (DUF3300) ACU13_09645 PF01329 Pterin 4 alpha carbinolamine dehydratase ACU13_09650 PF01106 NifU-like domain ACU13_09660 PF01527 Transposase ACU13_09670 PF05598 Transposase domain (DUF772) ACU13_09695 PF16671 Actin cross-linking domain ACU13_09695 PF04717 Type VI secretion system, phage-baseplate injector ACU13_09710 PF05638 Type VI secretion system effector, Hcp ACU13_09735 PF00004 ATPase family associated with various cellular activities (AAA) ACU13_09735 PF17871 AAA lid domain ACU13_09735 PF10431 C-terminal, D2-small domain, of ClpB protein ACU13_09735 PF07724 AAA domain (Cdc48 subfamily) ACU13_09745 PF05598 Transposase domain (DUF772) ACU13_09745 PF01609 Transposase DDE domain ACU13_09755 PF04717 Type VI secretion system, phage-baseplate injector ACU13_09755 PF16671 Actin cross-linking domain ACU13_09795 PF00069 Protein kinase domain ACU13_09810 PF03466 LysR substrate binding domain ACU13_09810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACU13_09815 PF00512 His Kinase A (phospho-acceptor) domain ACU13_09815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU13_09820 PF03150 Di-haem cytochrome c peroxidase ACU13_09820 PF00034 Cytochrome c ACU13_09825 PF00486 Transcriptional regulatory protein, C terminal ACU13_09825 PF00072 Response regulator receiver domain ACU13_09840 PF13276 HTH-like domain ACU13_09845 PF01527 Transposase ACU13_09875 PF00529 HlyD membrane-fusion protein of T1SS ACU13_09875 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ACU13_09880 PF00873 AcrB/AcrD/AcrF family ACU13_09955 PF14226 non-haem dioxygenase in morphine synthesis N-terminal ACU13_09955 PF03171 2OG-Fe(II) oxygenase superfamily ACU13_09970 PF05598 Transposase domain (DUF772) ACU13_09970 PF01609 Transposase DDE domain ACU13_09980 PF13936 Helix-turn-helix domain ACU13_09980 PF00665 Integrase core domain ACU13_09995 PF05598 Transposase domain (DUF772) ACU13_10015 PF03377 TAL effector repeat ACU13_10035 PF13276 HTH-like domain ACU13_10035 PF13683 Integrase core domain ACU13_10040 PF01527 Transposase ACU13_10045 PF03377 TAL effector repeat ACU13_10060 PF05598 Transposase domain (DUF772) ACU13_10060 PF01609 Transposase DDE domain ACU13_10065 PF00082 Subtilase family ACU13_10065 PF03797 Autotransporter beta-domain ACU13_10070 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ACU13_10075 PF00873 AcrB/AcrD/AcrF family ACU13_10080 PF02321 Outer membrane efflux protein ACU13_10085 PF00072 Response regulator receiver domain ACU13_10085 PF00512 His Kinase A (phospho-acceptor) domain ACU13_10085 PF13426 PAS domain ACU13_10085 PF08448 PAS fold ACU13_10085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU13_10090 PF00072 Response regulator receiver domain ACU13_10090 PF00196 Bacterial regulatory proteins, luxR family ACU13_10095 PF12951 Passenger-associated-transport-repeat ACU13_10105 PF00990 Diguanylate cyclase, GGDEF domain ACU13_10105 PF08448 PAS fold ACU13_10105 PF00563 EAL domain ACU13_10105 PF08447 PAS fold ACU13_10150 PF10414 Sirohaem synthase dimerisation region ACU13_10150 PF14824 Sirohaem biosynthesis protein central ACU13_10150 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ACU13_10175 PF12804 MobA-like NTP transferase domain ACU13_10180 PF03454 MoeA C-terminal region (domain IV) ACU13_10180 PF00994 Probable molybdopterin binding domain ACU13_10180 PF03453 MoeA N-terminal region (domain I and II) ACU13_10215 PF00899 ThiF family ACU13_10225 PF03454 MoeA C-terminal region (domain IV) ACU13_10225 PF00994 Probable molybdopterin binding domain ACU13_10225 PF03453 MoeA N-terminal region (domain I and II) ACU13_10230 PF01926 50S ribosome-binding GTPase ACU13_10230 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ACU13_10235 PF01011 PQQ enzyme repeat ACU13_10235 PF13360 PQQ-like domain ACU13_10245 PF13464 Domain of unknown function (DUF4115) ACU13_10255 PF04055 Radical SAM superfamily ACU13_10260 PF00334 Nucleoside diphosphate kinase ACU13_10270 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ACU13_10270 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ACU13_10270 PF00378 Enoyl-CoA hydratase/isomerase ACU13_10275 PF02803 Thiolase, C-terminal domain ACU13_10275 PF00108 Thiolase, N-terminal domain ACU13_10280 PF00654 Voltage gated chloride channel ACU13_10290 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ACU13_10300 PF12002 MgsA AAA+ ATPase C terminal ACU13_10300 PF16193 AAA C-terminal domain ACU13_10300 PF00004 ATPase family associated with various cellular activities (AAA) ACU13_10310 PF03548 Outer membrane lipoprotein carrier protein LolA ACU13_10320 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ACU13_10320 PF17854 FtsK alpha domain ACU13_10320 PF09397 Ftsk gamma domain ACU13_10320 PF01580 FtsK/SpoIIIE family ACU13_10325 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACU13_10345 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ACU13_10350 PF01176 Translation initiation factor 1A / IF-1 ACU13_10355 PF00004 ATPase family associated with various cellular activities (AAA) ACU13_10355 PF07724 AAA domain (Cdc48 subfamily) ACU13_10355 PF17871 AAA lid domain ACU13_10355 PF02861 Clp amino terminal domain, pathogenicity island component ACU13_10355 PF10431 C-terminal, D2-small domain, of ClpB protein ACU13_10360 PF02617 ATP-dependent Clp protease adaptor protein ClpS ACU13_10365 PF00293 NUDIX domain ACU13_10375 PF04356 Protein of unknown function (DUF489) ACU13_10380 PF12729 Four helix bundle sensory module for signal transduction ACU13_10380 PF00672 HAMP domain ACU13_10380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACU13_10395 PF03707 Bacterial signalling protein N terminal repeat ACU13_10395 PF00563 EAL domain ACU13_10395 PF00990 Diguanylate cyclase, GGDEF domain ACU13_10400 PF07730 Histidine kinase ACU13_10400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU13_10405 PF03707 Bacterial signalling protein N terminal repeat ACU13_10405 PF00990 Diguanylate cyclase, GGDEF domain ACU13_10405 PF00563 EAL domain ACU13_10410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU13_10410 PF00512 His Kinase A (phospho-acceptor) domain ACU13_10430 PF01584 CheW-like domain ACU13_10430 PF00072 Response regulator receiver domain ACU13_10440 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ACU13_10440 PF00460 Flagella basal body rod protein ACU13_10445 PF03963 Flagellar hook capping protein - N-terminal region ACU13_10450 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ACU13_10450 PF00460 Flagella basal body rod protein ACU13_10450 PF07559 Flagellar basal body protein FlaE ACU13_10455 PF00460 Flagella basal body rod protein ACU13_10455 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ACU13_10460 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ACU13_10460 PF00460 Flagella basal body rod protein ACU13_10465 PF02107 Flagellar L-ring protein ACU13_10470 PF02119 Flagellar P-ring protein ACU13_10475 PF10135 Rod binding protein ACU13_10475 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ACU13_10480 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ACU13_10480 PF07196 Flagellin hook IN motif ACU13_10490 PF00700 Bacterial flagellin C-terminal helical region ACU13_10490 PF00669 Bacterial flagellin N-terminal helical region ACU13_10495 PF07196 Flagellin hook IN motif ACU13_10495 PF07195 Flagellar hook-associated protein 2 C-terminus ACU13_10495 PF02465 Flagellar hook-associated protein 2 N-terminus ACU13_10500 PF02561 Flagellar protein FliS ACU13_10515 PF00072 Response regulator receiver domain ACU13_10515 PF00196 Bacterial regulatory proteins, luxR family ACU13_10520 PF00309 Sigma-54 factor, Activator interacting domain (AID) ACU13_10520 PF04552 Sigma-54, DNA binding domain ACU13_10520 PF04963 Sigma-54 factor, core binding domain ACU13_10525 PF00072 Response regulator receiver domain ACU13_10525 PF01339 CheB methylesterase ACU13_10530 PF00158 Sigma-54 interaction domain ACU13_10530 PF02954 Bacterial regulatory protein, Fis family ACU13_10530 PF00072 Response regulator receiver domain ACU13_10535 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ACU13_10545 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ACU13_10545 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ACU13_10550 PF00106 short chain dehydrogenase ACU13_10580 PF00535 Glycosyl transferase family 2 ACU13_10580 PF00534 Glycosyl transferases group 1 ACU13_10585 PF02049 Flagellar hook-basal body complex protein FliE ACU13_10590 PF08345 Flagellar M-ring protein C-terminal ACU13_10590 PF01514 Secretory protein of YscJ/FliF family ACU13_10595 PF01706 FliG C-terminal domain ACU13_10595 PF14842 FliG N-terminal domain ACU13_10595 PF14841 FliG middle domain ACU13_10605 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ACU13_10605 PF18269 T3SS EscN ATPase C-terminal domain ACU13_10625 PF02154 Flagellar motor switch protein FliM ACU13_10625 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ACU13_10630 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ACU13_10635 PF04347 Flagellar biosynthesis protein, FliO ACU13_10640 PF00813 FliP family ACU13_10645 PF01313 Bacterial export proteins, family 3 ACU13_10650 PF01311 Bacterial export proteins, family 1 ACU13_10655 PF00563 EAL domain ACU13_10655 PF00990 Diguanylate cyclase, GGDEF domain ACU13_10655 PF03707 Bacterial signalling protein N terminal repeat ACU13_10655 PF13188 PAS domain ACU13_10660 PF03707 Bacterial signalling protein N terminal repeat ACU13_10660 PF00563 EAL domain ACU13_10660 PF13188 PAS domain ACU13_10660 PF00990 Diguanylate cyclase, GGDEF domain ACU13_10665 PF00990 Diguanylate cyclase, GGDEF domain ACU13_10665 PF03707 Bacterial signalling protein N terminal repeat ACU13_10665 PF00563 EAL domain ACU13_10670 PF01312 FlhB HrpN YscU SpaS Family ACU13_10675 PF00771 FHIPEP family ACU13_10680 PF00448 SRP54-type protein, GTPase domain ACU13_10685 PF10609 NUBPL iron-transfer P-loop NTPase ACU13_10690 PF04545 Sigma-70, region 4 ACU13_10690 PF04539 Sigma-70 region 3 ACU13_10690 PF04542 Sigma-70 region 2 ACU13_10695 PF00072 Response regulator receiver domain ACU13_10700 PF04344 Chemotaxis phosphatase, CheZ ACU13_10705 PF07194 P2 response regulator binding domain ACU13_10705 PF01584 CheW-like domain ACU13_10705 PF01627 Hpt domain ACU13_10705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU13_10705 PF02895 Signal transducing histidine kinase, homodimeric domain ACU13_10755 PF07715 TonB-dependent Receptor Plug Domain ACU13_10755 PF00593 TonB dependent receptor ACU13_10760 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ACU13_10760 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ACU13_10780 PF01618 MotA/TolQ/ExbB proton channel family ACU13_10785 PF13677 Membrane MotB of proton-channel complex MotA/MotB ACU13_10785 PF00691 OmpA family ACU13_10790 PF13614 AAA domain ACU13_10795 PF01584 CheW-like domain ACU13_10805 PF00072 Response regulator receiver domain ACU13_10810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU13_10810 PF01627 Hpt domain ACU13_10810 PF02895 Signal transducing histidine kinase, homodimeric domain ACU13_10810 PF09078 CheY binding ACU13_10810 PF01584 CheW-like domain ACU13_10815 PF02203 Tar ligand binding domain homologue ACU13_10815 PF00672 HAMP domain ACU13_10815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACU13_10825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACU13_10825 PF02203 Tar ligand binding domain homologue ACU13_10825 PF00672 HAMP domain ACU13_10830 PF00672 HAMP domain ACU13_10830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACU13_10830 PF02203 Tar ligand binding domain homologue ACU13_10840 PF02203 Tar ligand binding domain homologue ACU13_10840 PF00672 HAMP domain ACU13_10840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACU13_10845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACU13_10845 PF02203 Tar ligand binding domain homologue ACU13_10845 PF00672 HAMP domain ACU13_10850 PF00672 HAMP domain ACU13_10850 PF02203 Tar ligand binding domain homologue ACU13_10850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACU13_10855 PF00672 HAMP domain ACU13_10855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACU13_10855 PF02203 Tar ligand binding domain homologue ACU13_10860 PF02203 Tar ligand binding domain homologue ACU13_10860 PF00672 HAMP domain ACU13_10860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACU13_10865 PF02203 Tar ligand binding domain homologue ACU13_10865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACU13_10865 PF00672 HAMP domain ACU13_10870 PF00672 HAMP domain ACU13_10870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACU13_10870 PF02203 Tar ligand binding domain homologue ACU13_10875 PF00672 HAMP domain ACU13_10875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACU13_10875 PF02203 Tar ligand binding domain homologue ACU13_10880 PF07238 PilZ domain ACU13_10880 PF07317 Flagellar regulator YcgR ACU13_10885 PF01584 CheW-like domain ACU13_10895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACU13_10895 PF00672 HAMP domain ACU13_10895 PF02203 Tar ligand binding domain homologue ACU13_10900 PF03705 CheR methyltransferase, all-alpha domain ACU13_10900 PF01739 CheR methyltransferase, SAM binding domain ACU13_10905 PF03975 CheD chemotactic sensory transduction ACU13_10910 PF00072 Response regulator receiver domain ACU13_10910 PF01339 CheB methylesterase ACU13_10915 PF00563 EAL domain ACU13_10915 PF00990 Diguanylate cyclase, GGDEF domain ACU13_10915 PF03707 Bacterial signalling protein N terminal repeat ACU13_10920 PF00561 alpha/beta hydrolase fold ACU13_10925 PF06434 Aconitate hydratase 2 N-terminus ACU13_10925 PF00330 Aconitase family (aconitate hydratase) ACU13_10925 PF11791 Aconitate B N-terminal domain ACU13_10940 PF00330 Aconitase family (aconitate hydratase) ACU13_10940 PF00694 Aconitase C-terminal domain ACU13_10950 PF00501 AMP-binding enzyme ACU13_10950 PF13193 AMP-binding enzyme C-terminal domain ACU13_10955 PF00378 Enoyl-CoA hydratase/isomerase ACU13_10960 PF00512 His Kinase A (phospho-acceptor) domain ACU13_10960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU13_10960 PF00072 Response regulator receiver domain ACU13_10960 PF01627 Hpt domain ACU13_10965 PF00072 Response regulator receiver domain ACU13_10970 PF00152 tRNA synthetases class II (D, K and N) ACU13_10970 PF01336 OB-fold nucleic acid binding domain ACU13_10975 PF03462 PCRF domain ACU13_10975 PF00472 RF-1 domain ACU13_10995 PF17768 RecJ OB domain ACU13_10995 PF02272 DHHA1 domain ACU13_10995 PF01368 DHH family ACU13_11005 PF01272 Transcription elongation factor, GreA/GreB, C-term ACU13_11005 PF03449 Transcription elongation factor, N-terminal ACU13_11010 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ACU13_11010 PF02142 MGS-like domain ACU13_11010 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ACU13_11020 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ACU13_11020 PF00117 Glutamine amidotransferase class-I ACU13_11025 PF01113 Dihydrodipicolinate reductase, N-terminus ACU13_11025 PF05173 Dihydrodipicolinate reductase, C-terminus ACU13_11030 PF03475 3-alpha domain ACU13_11030 PF03473 MOSC domain ACU13_11035 PF00155 Aminotransferase class I and II ACU13_11055 PF07664 Ferrous iron transport protein B C terminus ACU13_11055 PF07670 Nucleoside recognition ACU13_11055 PF02421 Ferrous iron transport protein B ACU13_11065 PF00378 Enoyl-CoA hydratase/isomerase ACU13_11075 PF00682 HMGL-like ACU13_11080 PF00106 short chain dehydrogenase ACU13_11085 PF08207 Elongation factor P (EF-P) KOW-like domain ACU13_11085 PF01132 Elongation factor P (EF-P) OB domain ACU13_11085 PF09285 Elongation factor P, C-terminal ACU13_11110 PF01565 FAD binding domain ACU13_11110 PF02913 FAD linked oxidases, C-terminal domain ACU13_11115 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ACU13_11115 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ACU13_11125 PF13520 Amino acid permease ACU13_11130 PF13520 Amino acid permease ACU13_11135 PF00596 Class II Aldolase and Adducin N-terminal domain ACU13_11140 PF03079 ARD/ARD' family ACU13_11165 PF01502 Phosphoribosyl-AMP cyclohydrolase ACU13_11165 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ACU13_11170 PF00977 Histidine biosynthesis protein ACU13_11175 PF00977 Histidine biosynthesis protein ACU13_11180 PF00117 Glutamine amidotransferase class-I ACU13_11185 PF00475 Imidazoleglycerol-phosphate dehydratase ACU13_11190 PF00155 Aminotransferase class I and II ACU13_11195 PF00815 Histidinol dehydrogenase ACU13_11200 PF01634 ATP phosphoribosyltransferase ACU13_11200 PF08029 HisG, C-terminal domain ACU13_11210 PF13393 Histidyl-tRNA synthetase ACU13_11210 PF03129 Anticodon binding domain ACU13_11225 PF00291 Pyridoxal-phosphate dependent enzyme ACU13_11225 PF14821 Threonine synthase N terminus ACU13_11240 PF01527 Transposase ACU13_11245 PF13683 Integrase core domain ACU13_11245 PF13276 HTH-like domain ACU13_11265 PF01527 Transposase ACU13_11270 PF00288 GHMP kinases N terminal domain ACU13_11270 PF08544 GHMP kinases C terminal ACU13_11275 PF03447 Homoserine dehydrogenase, NAD binding domain ACU13_11275 PF13840 ACT domain ACU13_11275 PF01842 ACT domain ACU13_11275 PF00696 Amino acid kinase family ACU13_11275 PF00742 Homoserine dehydrogenase ACU13_11280 PF03073 TspO/MBR family ACU13_11290 PF00171 Aldehyde dehydrogenase family ACU13_11305 PF01180 Dihydroorotate dehydrogenase ACU13_11310 PF01565 FAD binding domain ACU13_11310 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ACU13_11315 PF00892 EamA-like transporter family ACU13_11320 PF01177 Asp/Glu/Hydantoin racemase ACU13_11325 PF07690 Major Facilitator Superfamily ACU13_11330 PF01569 PAP2 superfamily ACU13_11335 PF04551 GcpE protein ACU13_11345 PF00072 Response regulator receiver domain ACU13_11350 PF02013 Cellulose or protein binding domain ACU13_11350 PF00150 Cellulase (glycosyl hydrolase family 5) ACU13_11355 PF00563 EAL domain ACU13_11355 PF01590 GAF domain ACU13_11355 PF00360 Phytochrome region ACU13_11355 PF00990 Diguanylate cyclase, GGDEF domain ACU13_11360 PF00474 Sodium:solute symporter family ACU13_11365 PF01915 Glycosyl hydrolase family 3 C-terminal domain ACU13_11365 PF14310 Fibronectin type III-like domain ACU13_11365 PF00933 Glycosyl hydrolase family 3 N terminal domain ACU13_11385 PF00342 Phosphoglucose isomerase ACU13_11390 PF02261 Aspartate decarboxylase ACU13_11395 PF02569 Pantoate-beta-alanine ligase ACU13_11400 PF02548 Ketopantoate hydroxymethyltransferase ACU13_11405 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ACU13_11410 PF01743 Poly A polymerase head domain ACU13_11410 PF12626 Polymerase A arginine-rich C-terminus ACU13_11410 PF12627 Probable RNA and SrmB- binding site of polymerase A ACU13_11420 PF02649 Type I GTP cyclohydrolase folE2 ACU13_11425 PF01520 N-acetylmuramoyl-L-alanine amidase ACU13_11430 PF00083 Sugar (and other) transporter ACU13_11440 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ACU13_11440 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ACU13_11460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACU13_11460 PF03466 LysR substrate binding domain ACU13_11465 PF01081 KDPG and KHG aldolase ACU13_11470 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ACU13_11470 PF13378 Enolase C-terminal domain-like ACU13_11475 PF08450 SMP-30/Gluconolactonase/LRE-like region ACU13_11480 PF05035 2-keto-3-deoxy-galactonokinase ACU13_11485 PF11953 Domain of unknown function (DUF3470) ACU13_11485 PF00037 4Fe-4S binding domain ACU13_11495 PF00701 Dihydrodipicolinate synthetase family ACU13_11510 PF00578 AhpC/TSA family ACU13_11515 PF02562 PhoH-like protein ACU13_11515 PF13638 PIN domain ACU13_11525 PF02581 Thiamine monophosphate synthase ACU13_11525 PF08543 Phosphomethylpyrimidine kinase ACU13_11550 PF03466 LysR substrate binding domain ACU13_11550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACU13_11555 PF17954 Quercetinase C-terminal cupin domain ACU13_11555 PF02678 Pirin ACU13_11570 PF01527 Transposase ACU13_11575 PF13333 Integrase core domain ACU13_11575 PF13276 HTH-like domain ACU13_11575 PF00665 Integrase core domain ACU13_11580 PF00295 Glycosyl hydrolases family 28 ACU13_11590 PF13419 Haloacid dehalogenase-like hydrolase ACU13_11600 PF01979 Amidohydrolase family ACU13_11610 PF09285 Elongation factor P, C-terminal ACU13_11610 PF08207 Elongation factor P (EF-P) KOW-like domain ACU13_11610 PF01132 Elongation factor P (EF-P) OB domain ACU13_11615 PF04055 Radical SAM superfamily ACU13_11620 PF00563 EAL domain ACU13_11620 PF13188 PAS domain ACU13_11620 PF03707 Bacterial signalling protein N terminal repeat ACU13_11620 PF00990 Diguanylate cyclase, GGDEF domain ACU13_11630 PF00588 SpoU rRNA Methylase family ACU13_11635 PF00459 Inositol monophosphatase family ACU13_11640 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ACU13_11640 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ACU13_11645 PF00545 ribonuclease ACU13_11665 PF03880 DbpA RNA binding domain ACU13_11665 PF00270 DEAD/DEAH box helicase ACU13_11665 PF00271 Helicase conserved C-terminal domain ACU13_11670 PF00156 Phosphoribosyl transferase domain ACU13_11675 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ACU13_11685 PF02798 Glutathione S-transferase, N-terminal domain ACU13_11685 PF14497 Glutathione S-transferase, C-terminal domain ACU13_11690 PF00313 'Cold-shock' DNA-binding domain ACU13_11695 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 ACU13_11700 PF07152 YaeQ protein ACU13_11710 PF00563 EAL domain ACU13_11710 PF00990 Diguanylate cyclase, GGDEF domain ACU13_11710 PF00072 Response regulator receiver domain ACU13_11715 PF01435 Peptidase family M48 ACU13_11720 PF00749 tRNA synthetases class I (E and Q), catalytic domain ACU13_11725 PF00106 short chain dehydrogenase ACU13_11730 PF07879 PHB/PHA accumulation regulator DNA-binding domain ACU13_11730 PF05233 PHB accumulation regulatory domain ACU13_11745 PF01119 DNA mismatch repair protein, C-terminal domain ACU13_11745 PF08676 MutL C terminal dimerisation domain ACU13_11750 PF11741 AMIN domain ACU13_11750 PF01520 N-acetylmuramoyl-L-alanine amidase ACU13_11755 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ACU13_11760 PF01256 Carbohydrate kinase ACU13_11760 PF03853 YjeF-related protein N-terminus ACU13_11765 PF08331 Domain of unknown function (DUF1730) ACU13_11770 PF13742 OB-fold nucleic acid binding domain ACU13_11770 PF02601 Exonuclease VII, large subunit ACU13_11780 PF03781 Sulfatase-modifying factor enzyme 1 ACU13_11785 PF01612 3'-5' exonuclease ACU13_11785 PF00570 HRDC domain ACU13_11835 PF00291 Pyridoxal-phosphate dependent enzyme ACU13_11890 PF03328 HpcH/HpaI aldolase/citrate lyase family ACU13_11945 PF01584 CheW-like domain ACU13_11950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACU13_11950 PF00672 HAMP domain ACU13_11950 PF02743 Cache domain ACU13_11970 PF04386 Stringent starvation protein B ACU13_11975 PF00043 Glutathione S-transferase, C-terminal domain ACU13_11975 PF02798 Glutathione S-transferase, N-terminal domain ACU13_11980 PF02167 Cytochrome C1 family ACU13_11985 PF00033 Cytochrome b/b6/petB ACU13_11985 PF00032 Cytochrome b(C-terminal)/b6/petD ACU13_11990 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal ACU13_11990 PF00355 Rieske [2Fe-2S] domain ACU13_11995 PF01464 Transglycosylase SLT domain ACU13_12010 PF04055 Radical SAM superfamily ACU13_12010 PF01938 TRAM domain ACU13_12010 PF00919 Uncharacterized protein family UPF0004 ACU13_12015 PF02562 PhoH-like protein ACU13_12025 PF02130 Uncharacterized protein family UPF0054 ACU13_12035 PF00571 CBS domain ACU13_12035 PF03471 Transporter associated domain ACU13_12050 PF00171 Aldehyde dehydrogenase family ACU13_12055 PF00528 Binding-protein-dependent transport system inner membrane component ACU13_12060 PF00528 Binding-protein-dependent transport system inner membrane component ACU13_12065 PF08402 TOBE domain ACU13_12065 PF00005 ABC transporter ACU13_12070 PF02321 Outer membrane efflux protein ACU13_12075 PF07690 Major Facilitator Superfamily ACU13_12080 PF13533 Biotin-lipoyl like ACU13_12085 PF13416 Bacterial extracellular solute-binding protein ACU13_12090 PF00202 Aminotransferase class-III ACU13_12100 PF04717 Type VI secretion system, phage-baseplate injector ACU13_12100 PF16671 Actin cross-linking domain ACU13_12105 PF03377 TAL effector repeat ACU13_12110 PF03377 TAL effector repeat ACU13_12115 PF03377 TAL effector repeat ACU13_12120 PF13683 Integrase core domain ACU13_12120 PF13276 HTH-like domain ACU13_12125 PF16671 Actin cross-linking domain ACU13_12125 PF04717 Type VI secretion system, phage-baseplate injector ACU13_12155 PF00120 Glutamine synthetase, catalytic domain ACU13_12160 PF07722 Peptidase C26 ACU13_12165 PF00120 Glutamine synthetase, catalytic domain ACU13_12170 PF01266 FAD dependent oxidoreductase ACU13_12175 PF00072 Response regulator receiver domain ACU13_12175 PF00990 Diguanylate cyclase, GGDEF domain ACU13_12180 PF00083 Sugar (and other) transporter ACU13_12180 PF07690 Major Facilitator Superfamily ACU13_12185 PF00384 Molybdopterin oxidoreductase ACU13_12190 PF02634 FdhD/NarQ family ACU13_12200 PF00202 Aminotransferase class-III ACU13_12205 PF00005 ABC transporter ACU13_12215 PF04286 Protein of unknown function (DUF445) ACU13_12220 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ACU13_12220 PF00672 HAMP domain ACU13_12220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU13_12220 PF00512 His Kinase A (phospho-acceptor) domain ACU13_12220 PF01627 Hpt domain ACU13_12220 PF00072 Response regulator receiver domain ACU13_12225 PF00072 Response regulator receiver domain ACU13_12230 PF07690 Major Facilitator Superfamily ACU13_12240 PF05088 Bacterial NAD-glutamate dehydrogenase ACU13_12250 PF00529 HlyD membrane-fusion protein of T1SS ACU13_12250 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ACU13_12255 PF00873 AcrB/AcrD/AcrF family ACU13_12260 PF13006 Insertion element 4 transposase N-terminal ACU13_12260 PF01609 Transposase DDE domain ACU13_12265 PF00356 Bacterial regulatory proteins, lacI family ACU13_12270 PF05524 PEP-utilising enzyme, N-terminal ACU13_12270 PF00381 PTS HPr component phosphorylation site ACU13_12270 PF02896 PEP-utilising enzyme, TIM barrel domain ACU13_12270 PF00391 PEP-utilising enzyme, mobile domain ACU13_12270 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ACU13_12275 PF00294 pfkB family carbohydrate kinase ACU13_12280 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ACU13_12290 PF01609 Transposase DDE domain ACU13_12290 PF05598 Transposase domain (DUF772) ACU13_12295 PF01593 Flavin containing amine oxidoreductase ACU13_12315 PF13683 Integrase core domain ACU13_12315 PF13276 HTH-like domain ACU13_12335 PF07549 SecD/SecF GG Motif ACU13_12335 PF02355 Protein export membrane protein ACU13_12340 PF07549 SecD/SecF GG Motif ACU13_12340 PF13721 SecD export protein N-terminal TM region ACU13_12340 PF02355 Protein export membrane protein ACU13_12345 PF02699 Preprotein translocase subunit ACU13_12350 PF01702 Queuine tRNA-ribosyltransferase ACU13_12355 PF02547 Queuosine biosynthesis protein ACU13_12410 PF00037 4Fe-4S binding domain ACU13_12425 PF01467 Cytidylyltransferase-like ACU13_12435 PF00183 Hsp90 protein ACU13_12435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU13_12445 PF05598 Transposase domain (DUF772) ACU13_12455 PF05598 Transposase domain (DUF772) ACU13_12480 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region ACU13_12480 PF00326 Prolyl oligopeptidase family ACU13_12485 PF04616 Glycosyl hydrolases family 43 ACU13_12490 PF07532 Bacterial Ig-like domain (group 4) ACU13_12495 PF00593 TonB dependent receptor ACU13_12495 PF07715 TonB-dependent Receptor Plug Domain ACU13_12505 PF09286 Pro-kumamolisin, activation domain ACU13_12505 PF00082 Subtilase family ACU13_12545 PF13520 Amino acid permease ACU13_12560 PF01321 Creatinase/Prolidase N-terminal domain ACU13_12560 PF00557 Metallopeptidase family M24 ACU13_12565 PF00171 Aldehyde dehydrogenase family ACU13_12570 PF00701 Dihydrodipicolinate synthetase family ACU13_12575 PF04324 BFD-like [2Fe-2S] binding domain ACU13_12575 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACU13_12585 PF01266 FAD dependent oxidoreductase ACU13_12590 PF05544 Proline racemase ACU13_12600 PF02881 SRP54-type protein, helical bundle domain ACU13_12600 PF00448 SRP54-type protein, GTPase domain ACU13_12610 PF00730 HhH-GPD superfamily base excision DNA repair protein ACU13_12610 PF14815 NUDIX domain ACU13_12610 PF00633 Helix-hairpin-helix motif ACU13_12610 PF10576 Iron-sulfur binding domain of endonuclease III ACU13_12615 PF04362 Bacterial Fe(2+) trafficking ACU13_12620 PF13426 PAS domain ACU13_12620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU13_12620 PF00072 Response regulator receiver domain ACU13_12650 PF08212 Lipocalin-like domain ACU13_12660 PF12806 Acetyl-CoA dehydrogenase C-terminal like ACU13_12660 PF02770 Acyl-CoA dehydrogenase, middle domain ACU13_12660 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACU13_12660 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACU13_12670 PF02780 Transketolase, C-terminal domain ACU13_12670 PF02779 Transketolase, pyrimidine binding domain ACU13_12670 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ACU13_12690 PF03808 Glycosyl transferase WecB/TagA/CpsF family ACU13_12705 PF14667 Polysaccharide biosynthesis C-terminal domain ACU13_12715 PF00534 Glycosyl transferases group 1 ACU13_12715 PF13439 Glycosyltransferase Family 4 ACU13_12735 PF02397 Bacterial sugar transferase ACU13_12755 PF13411 MerR HTH family regulatory protein ACU13_12760 PF00216 Bacterial DNA-binding protein ACU13_12765 PF03147 Ferredoxin-fold anticodon binding domain ACU13_12765 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ACU13_12765 PF03483 B3/4 domain ACU13_12765 PF03484 tRNA synthetase B5 domain ACU13_12765 PF01588 Putative tRNA binding domain ACU13_12770 PF01409 tRNA synthetases class II core domain (F) ACU13_12770 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ACU13_12775 PF00453 Ribosomal protein L20 ACU13_12780 PF01632 Ribosomal protein L35 ACU13_12785 PF00707 Translation initiation factor IF-3, C-terminal domain ACU13_12785 PF05198 Translation initiation factor IF-3, N-terminal domain ACU13_12790 PF03129 Anticodon binding domain ACU13_12790 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ACU13_12790 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ACU13_12790 PF02824 TGS domain ACU13_12795 PF01527 Transposase ACU13_12805 PF05598 Transposase domain (DUF772) ACU13_12810 PF05598 Transposase domain (DUF772) ACU13_12820 PF02403 Seryl-tRNA synthetase N-terminal domain ACU13_12820 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ACU13_12835 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ACU13_12840 PF01842 ACT domain ACU13_12840 PF01817 Chorismate mutase type II ACU13_12840 PF00800 Prephenate dehydratase ACU13_12845 PF00266 Aminotransferase class-V ACU13_12850 PF00174 Oxidoreductase molybdopterin binding domain ACU13_12860 PF01794 Ferric reductase like transmembrane component ACU13_12885 PF00392 Bacterial regulatory proteins, gntR family ACU13_12885 PF07702 UTRA domain ACU13_12895 PF07969 Amidohydrolase family ACU13_12900 PF00221 Aromatic amino acid lyase ACU13_12910 PF01175 Urocanase Rossmann-like domain ACU13_12910 PF17391 Urocanase N-terminal domain ACU13_12910 PF17392 Urocanase C-terminal domain ACU13_12925 PF03377 TAL effector repeat ACU13_12930 PF01527 Transposase ACU13_12935 PF13276 HTH-like domain ACU13_12935 PF13683 Integrase core domain ACU13_12945 PF12344 Ultra-violet resistance protein B ACU13_12945 PF02151 UvrB/uvrC motif ACU13_12945 PF17757 UvrB interaction domain ACU13_12945 PF00271 Helicase conserved C-terminal domain ACU13_12945 PF04851 Type III restriction enzyme, res subunit ACU13_12950 PF00114 Pilin (bacterial filament) ACU13_12950 PF07963 Prokaryotic N-terminal methylation motif ACU13_13005 PF01555 DNA methylase ACU13_13060 PF00182 Chitinase class I ACU13_13085 PF05598 Transposase domain (DUF772) ACU13_13155 PF13614 AAA domain ACU13_13235 PF00114 Pilin (bacterial filament) ACU13_13235 PF07963 Prokaryotic N-terminal methylation motif ACU13_13240 PF05567 Neisseria PilC beta-propeller domain ACU13_13260 PF12019 Type II transport protein GspH ACU13_13260 PF07963 Prokaryotic N-terminal methylation motif ACU13_13265 PF03641 Possible lysine decarboxylase ACU13_13265 PF11892 Domain of unknown function (DUF3412) ACU13_13265 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases ACU13_13270 PF00593 TonB dependent receptor ACU13_13275 PF01914 MarC family integral membrane protein ACU13_13285 PF00462 Glutaredoxin ACU13_13290 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ACU13_13290 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ACU13_13295 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ACU13_13295 PF02222 ATP-grasp domain ACU13_13300 PF00731 AIR carboxylase ACU13_13310 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ACU13_13310 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ACU13_13320 PF00575 S1 RNA binding domain ACU13_13320 PF03725 3' exoribonuclease family, domain 2 ACU13_13320 PF01138 3' exoribonuclease family, domain 1 ACU13_13320 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ACU13_13320 PF00013 KH domain ACU13_13325 PF00312 Ribosomal protein S15 ACU13_13330 PF09157 Pseudouridine synthase II TruB, C-terminal ACU13_13330 PF01509 TruB family pseudouridylate synthase (N terminal domain) ACU13_13330 PF16198 tRNA pseudouridylate synthase B C-terminal domain ACU13_13335 PF02033 Ribosome-binding factor A ACU13_13340 PF00009 Elongation factor Tu GTP binding domain ACU13_13340 PF11987 Translation-initiation factor 2 ACU13_13340 PF04760 Translation initiation factor IF-2, N-terminal region ACU13_13340 PF08364 Bacterial translation initiation factor IF-2 associated region ACU13_13345 PF00575 S1 RNA binding domain ACU13_13345 PF13184 NusA-like KH domain ACU13_13345 PF08529 NusA N-terminal domain ACU13_13350 PF02576 RimP N-terminal domain ACU13_13350 PF17384 RimP C-terminal SH3 domain ACU13_13360 PF00361 Proton-conducting membrane transporter ACU13_13365 PF00361 Proton-conducting membrane transporter ACU13_13365 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus ACU13_13370 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ACU13_13370 PF00361 Proton-conducting membrane transporter ACU13_13375 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ACU13_13380 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ACU13_13385 PF12838 4Fe-4S dicluster domain ACU13_13390 PF00146 NADH dehydrogenase ACU13_13395 PF00384 Molybdopterin oxidoreductase ACU13_13395 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal ACU13_13395 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ACU13_13400 PF10531 SLBB domain ACU13_13400 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ACU13_13400 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ACU13_13410 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ACU13_13415 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ACU13_13420 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ACU13_13425 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ACU13_13435 PF03840 Preprotein translocase SecG subunit ACU13_13440 PF00121 Triosephosphate isomerase ACU13_13450 PF05598 Transposase domain (DUF772) ACU13_13450 PF01609 Transposase DDE domain ACU13_13465 PF03707 Bacterial signalling protein N terminal repeat ACU13_13465 PF00990 Diguanylate cyclase, GGDEF domain ACU13_13465 PF00563 EAL domain ACU13_13480 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ACU13_13480 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ACU13_13480 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ACU13_13480 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ACU13_13485 PF01039 Carboxyl transferase domain ACU13_13485 PF17848 Acetyl-coA carboxylase zinc finger domain ACU13_13490 PF00290 Tryptophan synthase alpha chain ACU13_13500 PF00291 Pyridoxal-phosphate dependent enzyme ACU13_13505 PF03466 LysR substrate binding domain ACU13_13505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACU13_13510 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ACU13_13515 PF01416 tRNA pseudouridine synthase ACU13_13530 PF01118 Semialdehyde dehydrogenase, NAD binding domain ACU13_13530 PF02774 Semialdehyde dehydrogenase, dimerisation domain ACU13_13535 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ACU13_13535 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ACU13_13540 PF01264 Chorismate synthase ACU13_13545 PF05175 Methyltransferase small domain ACU13_13550 PF02630 SCO1/SenC ACU13_13555 PF02666 Phosphatidylserine decarboxylase ACU13_13565 PF05872 Bacterial protein of unknown function (DUF853) ACU13_13580 PF13683 Integrase core domain ACU13_13580 PF13276 HTH-like domain ACU13_13595 PF03449 Transcription elongation factor, N-terminal ACU13_13595 PF01272 Transcription elongation factor, GreA/GreB, C-term ACU13_13605 PF04055 Radical SAM superfamily ACU13_13605 PF00919 Uncharacterized protein family UPF0004 ACU13_13605 PF18693 TRAM domain ACU13_13610 PF01738 Dienelactone hydrolase family ACU13_13630 PF00692 dUTPase ACU13_13635 PF10609 NUBPL iron-transfer P-loop NTPase ACU13_13640 PF13340 Putative transposase of IS4/5 family (DUF4096) ACU13_13650 PF00990 Diguanylate cyclase, GGDEF domain ACU13_13660 PF00990 Diguanylate cyclase, GGDEF domain ACU13_13660 PF08448 PAS fold ACU13_13665 PF01609 Transposase DDE domain ACU13_13665 PF05598 Transposase domain (DUF772) ACU13_13680 PF00691 OmpA family ACU13_13680 PF05736 OprF membrane domain ACU13_13690 PF03441 FAD binding domain of DNA photolyase ACU13_13690 PF00875 DNA photolyase ACU13_13695 PF00772 DnaB-like helicase N terminal domain ACU13_13695 PF03796 DnaB-like helicase C terminal domain ACU13_13700 PF03358 NADPH-dependent FMN reductase ACU13_13705 PF00733 Asparagine synthase ACU13_13705 PF13537 Glutamine amidotransferase domain ACU13_13710 PF00043 Glutathione S-transferase, C-terminal domain ACU13_13710 PF02798 Glutathione S-transferase, N-terminal domain ACU13_13720 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACU13_13720 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACU13_13720 PF02770 Acyl-CoA dehydrogenase, middle domain ACU13_13735 PF01026 TatD related DNase ACU13_13740 PF00899 ThiF family ACU13_13755 PF00313 'Cold-shock' DNA-binding domain ACU13_13770 PF02253 Phospholipase A1 ACU13_13780 PF05681 Fumarate hydratase (Fumerase) ACU13_13780 PF05683 Fumarase C-terminus ACU13_13785 PF00005 ABC transporter ACU13_13790 PF00175 Oxidoreductase NAD-binding domain ACU13_13790 PF00970 Oxidoreductase FAD-binding domain ACU13_13795 PF00255 Glutathione peroxidase ACU13_13815 PF00082 Subtilase family ACU13_13835 PF12802 MarR family ACU13_13860 PF00854 POT family ACU13_13870 PF14310 Fibronectin type III-like domain ACU13_13870 PF00933 Glycosyl hydrolase family 3 N terminal domain ACU13_13870 PF01915 Glycosyl hydrolase family 3 C-terminal domain ACU13_13890 PF07690 Major Facilitator Superfamily ACU13_13895 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ACU13_13895 PF00529 HlyD membrane-fusion protein of T1SS ACU13_13900 PF02321 Outer membrane efflux protein ACU13_13910 PF12833 Helix-turn-helix domain ACU13_13915 PF00521 DNA gyrase/topoisomerase IV, subunit A ACU13_13915 PF03989 DNA gyrase C-terminal domain, beta-propeller ACU13_13920 PF00210 Ferritin-like domain ACU13_13925 PF01804 Penicillin amidase ACU13_13940 PF00733 Asparagine synthase ACU13_13940 PF13537 Glutamine amidotransferase domain ACU13_13945 PF07687 Peptidase dimerisation domain ACU13_13945 PF01546 Peptidase family M20/M25/M40 ACU13_13955 PF03960 ArsC family ACU13_13965 PF00132 Bacterial transferase hexapeptide (six repeats) ACU13_13965 PF14602 Hexapeptide repeat of succinyl-transferase ACU13_13965 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal ACU13_13970 PF08335 GlnD PII-uridylyltransferase ACU13_13970 PF01909 Nucleotidyltransferase domain ACU13_13970 PF01966 HD domain ACU13_13975 PF00557 Metallopeptidase family M24 ACU13_14010 PF00318 Ribosomal protein S2 ACU13_14015 PF00889 Elongation factor TS ACU13_14020 PF00072 Response regulator receiver domain ACU13_14020 PF00990 Diguanylate cyclase, GGDEF domain ACU13_14025 PF00696 Amino acid kinase family ACU13_14030 PF01765 Ribosome recycling factor ACU13_14035 PF01255 Putative undecaprenyl diphosphate synthase ACU13_14045 PF13288 DXP reductoisomerase C-terminal domain ACU13_14045 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ACU13_14045 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ACU13_14050 PF17820 PDZ domain ACU13_14050 PF02163 Peptidase family M50 ACU13_14055 PF07244 Surface antigen variable number repeat ACU13_14055 PF01103 Surface antigen ACU13_14060 PF01609 Transposase DDE domain ACU13_14060 PF05598 Transposase domain (DUF772) ACU13_14065 PF00132 Bacterial transferase hexapeptide (six repeats) ACU13_14065 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ACU13_14070 PF07977 FabA-like domain ACU13_14075 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ACU13_14075 PF00132 Bacterial transferase hexapeptide (six repeats) ACU13_14080 PF02684 Lipid-A-disaccharide synthetase ACU13_14085 PF01351 Ribonuclease HII ACU13_14090 PF01336 OB-fold nucleic acid binding domain ACU13_14090 PF02811 PHP domain ACU13_14090 PF07733 Bacterial DNA polymerase III alpha NTPase domain ACU13_14090 PF14579 Helix-hairpin-helix motif ACU13_14090 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ACU13_14095 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ACU13_14115 PF05598 Transposase domain (DUF772) ACU13_14140 PF03551 Transcriptional regulator PadR-like family ACU13_14150 PF05598 Transposase domain (DUF772) ACU13_14170 PF02592 Putative vitamin uptake transporter ACU13_14180 PF02574 Homocysteine S-methyltransferase ACU13_14185 PF00324 Amino acid permease ACU13_14190 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ACU13_14200 PF09334 tRNA synthetases class I (M) ACU13_14200 PF01588 Putative tRNA binding domain ACU13_14230 PF04545 Sigma-70, region 4 ACU13_14230 PF04542 Sigma-70 region 2 ACU13_14275 PF01042 Endoribonuclease L-PSP ACU13_14285 PF09924 Uncharacterised conserved protein (DUF2156) ACU13_14285 PF03706 Lysylphosphatidylglycerol synthase TM region ACU13_14315 PF07690 Major Facilitator Superfamily ACU13_14320 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ACU13_14335 PF03831 PhnA domain ACU13_14335 PF08274 PhnA Zinc-Ribbon ACU13_14345 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ACU13_14380 PF01258 Prokaryotic dksA/traR C4-type zinc finger ACU13_14390 PF07043 Protein of unknown function (DUF1328) ACU13_14400 PF01863 Protein of unknown function DUF45 ACU13_14405 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ACU13_14405 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ACU13_14410 PF12951 Passenger-associated-transport-repeat ACU13_14410 PF00082 Subtilase family ACU13_14410 PF03797 Autotransporter beta-domain ACU13_14415 PF02803 Thiolase, C-terminal domain ACU13_14415 PF00108 Thiolase, N-terminal domain ACU13_14445 PF01068 ATP dependent DNA ligase domain ACU13_14445 PF04679 ATP dependent DNA ligase C terminal region ACU13_14445 PF04675 DNA ligase N terminus ACU13_14455 PF04679 ATP dependent DNA ligase C terminal region ACU13_14455 PF04675 DNA ligase N terminus ACU13_14455 PF01068 ATP dependent DNA ligase domain ACU13_14460 PF00271 Helicase conserved C-terminal domain ACU13_14460 PF08494 DEAD/H associated ACU13_14460 PF00270 DEAD/DEAH box helicase ACU13_14475 PF00313 'Cold-shock' DNA-binding domain ACU13_14480 PF01048 Phosphorylase superfamily ACU13_14490 PF00933 Glycosyl hydrolase family 3 N terminal domain ACU13_14495 PF04244 Deoxyribodipyrimidine photo-lyase-related protein ACU13_14500 PF01593 Flavin containing amine oxidoreductase ACU13_14505 PF01323 DSBA-like thioredoxin domain ACU13_14515 PF05958 tRNA (Uracil-5-)-methyltransferase ACU13_14525 PF11967 Recombination protein O N terminal ACU13_14525 PF02565 Recombination protein O C terminal ACU13_14530 PF01926 50S ribosome-binding GTPase ACU13_14530 PF07650 KH domain ACU13_14535 PF14622 Ribonuclease-III-like ACU13_14535 PF00035 Double-stranded RNA binding motif ACU13_14545 PF10502 Signal peptidase, peptidase S26 ACU13_14550 PF03144 Elongation factor Tu domain 2 ACU13_14550 PF06421 GTP-binding protein LepA C-terminus ACU13_14550 PF00009 Elongation factor Tu GTP binding domain ACU13_14550 PF00679 Elongation factor G C-terminus ACU13_14555 PF13180 PDZ domain ACU13_14565 PF04542 Sigma-70 region 2 ACU13_14565 PF08281 Sigma-70, region 4 ACU13_14570 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ACU13_14570 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ACU13_14570 PF00378 Enoyl-CoA hydratase/isomerase ACU13_14575 PF01545 Cation efflux family ACU13_14580 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ACU13_14580 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ACU13_14585 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ACU13_14585 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ACU13_14585 PF00378 Enoyl-CoA hydratase/isomerase ACU13_14590 PF00378 Enoyl-CoA hydratase/isomerase ACU13_14595 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACU13_14595 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACU13_14595 PF02770 Acyl-CoA dehydrogenase, middle domain ACU13_14600 PF00171 Aldehyde dehydrogenase family ACU13_14605 PF06114 IrrE N-terminal-like domain ACU13_14605 PF09856 Predicted transcriptional regulator (DUF2083) ACU13_14605 PF01381 Helix-turn-helix ACU13_14645 PF01627 Hpt domain ACU13_14645 PF00512 His Kinase A (phospho-acceptor) domain ACU13_14645 PF17149 Periplasmic sensor domain found in signal transduction proteins ACU13_14645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU13_14645 PF00672 HAMP domain ACU13_14645 PF00072 Response regulator receiver domain ACU13_14650 PF17149 Periplasmic sensor domain found in signal transduction proteins ACU13_14650 PF00672 HAMP domain ACU13_14650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU13_14650 PF01627 Hpt domain ACU13_14650 PF00512 His Kinase A (phospho-acceptor) domain ACU13_14650 PF00072 Response regulator receiver domain ACU13_14655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU13_14655 PF00512 His Kinase A (phospho-acceptor) domain ACU13_14655 PF09308 LuxQ, periplasmic ACU13_14655 PF00072 Response regulator receiver domain ACU13_14660 PF00665 Integrase core domain ACU13_14660 PF13936 Helix-turn-helix domain ACU13_14665 PF00072 Response regulator receiver domain ACU13_14665 PF17149 Periplasmic sensor domain found in signal transduction proteins ACU13_14665 PF00672 HAMP domain ACU13_14665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU13_14665 PF00512 His Kinase A (phospho-acceptor) domain ACU13_14665 PF01627 Hpt domain ACU13_14670 PF04264 YceI-like domain ACU13_14700 PF03315 Serine dehydratase beta chain ACU13_14700 PF03313 Serine dehydratase alpha chain ACU13_14710 PF01053 Cys/Met metabolism PLP-dependent enzyme ACU13_14715 PF00561 alpha/beta hydrolase fold ACU13_14720 PF08525 Opacity-associated protein A N-terminal motif ACU13_14720 PF01476 LysM domain ACU13_14720 PF01551 Peptidase family M23 ACU13_14725 PF16658 Class II release factor RF3, C-terminal domain ACU13_14725 PF00009 Elongation factor Tu GTP binding domain ACU13_14730 PF03006 Haemolysin-III related ACU13_14740 PF05598 Transposase domain (DUF772) ACU13_14750 PF00478 IMP dehydrogenase / GMP reductase domain ACU13_14750 PF00571 CBS domain ACU13_14755 PF00535 Glycosyl transferase family 2 ACU13_14760 PF00912 Transglycosylase ACU13_14765 PF01430 Hsp33 protein ACU13_14775 PF00593 TonB dependent receptor ACU13_14775 PF07715 TonB-dependent Receptor Plug Domain ACU13_14780 PF00440 Bacterial regulatory proteins, tetR family ACU13_14790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACU13_14790 PF09317 Domain of unknown function (DUF1974) ACU13_14790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACU13_14815 PF01597 Glycine cleavage H-protein ACU13_14820 PF01571 Aminomethyltransferase folate-binding domain ACU13_14820 PF08669 Glycine cleavage T-protein C-terminal barrel domain ACU13_14830 PF01145 SPFH domain / Band 7 family ACU13_14830 PF16200 C-terminal region of band_7 ACU13_14835 PF02694 Uncharacterised BCR, YnfA/UPF0060 family ACU13_14840 PF03819 MazG nucleotide pyrophosphohydrolase domain ACU13_14845 PF00459 Inositol monophosphatase family ACU13_14850 PF00293 NUDIX domain ACU13_14855 PF00202 Aminotransferase class-III ACU13_14860 PF04452 RNA methyltransferase ACU13_14865 PF02685 Glucokinase ACU13_14880 PF00704 Glycosyl hydrolases family 18 ACU13_14880 PF01476 LysM domain ACU13_14885 PF00728 Glycosyl hydrolase family 20, catalytic domain ACU13_14885 PF02838 Glycosyl hydrolase family 20, domain 2 ACU13_14885 PF07691 PA14 domain ACU13_14895 PF01915 Glycosyl hydrolase family 3 C-terminal domain ACU13_14895 PF07691 PA14 domain ACU13_14895 PF14310 Fibronectin type III-like domain ACU13_14895 PF00933 Glycosyl hydrolase family 3 N terminal domain ACU13_14900 PF03412 Peptidase C39 family ACU13_14900 PF00664 ABC transporter transmembrane region ACU13_14900 PF00005 ABC transporter ACU13_14905 PF00665 Integrase core domain ACU13_14905 PF13936 Helix-turn-helix domain ACU13_14915 PF07971 Glycosyl hydrolase family 92 ACU13_14915 PF17678 Glycosyl hydrolase family 92 N-terminal domain ACU13_14920 PF01301 Glycosyl hydrolases family 35 ACU13_14955 PF03932 CutC family ACU13_14960 PF01112 Asparaginase ACU13_14980 PF13302 Acetyltransferase (GNAT) domain ACU13_14995 PF01627 Hpt domain ACU13_14995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU13_14995 PF00072 Response regulator receiver domain ACU13_14995 PF01584 CheW-like domain ACU13_15000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACU13_15000 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term ACU13_15005 PF01584 CheW-like domain ACU13_15010 PF00072 Response regulator receiver domain ACU13_15015 PF00072 Response regulator receiver domain ACU13_15020 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ACU13_15020 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ACU13_15030 PF03747 ADP-ribosylglycohydrolase ACU13_15035 PF00814 Glycoprotease family ACU13_15040 PF04851 Type III restriction enzyme, res subunit ACU13_15040 PF13307 Helicase C-terminal domain ACU13_15050 PF00912 Transglycosylase ACU13_15050 PF14814 Bifunctional transglycosylase second domain ACU13_15050 PF00905 Penicillin binding protein transpeptidase domain ACU13_15055 PF00535 Glycosyl transferase family 2 ACU13_15065 PF13291 ACT domain ACU13_15065 PF02824 TGS domain ACU13_15065 PF04607 Region found in RelA / SpoT proteins ACU13_15070 PF12706 Beta-lactamase superfamily domain ACU13_15075 PF03070 TENA/THI-4/PQQC family ACU13_15080 PF05402 Coenzyme PQQ synthesis protein D (PqqD) ACU13_15085 PF13186 Iron-sulfur cluster-binding domain ACU13_15085 PF04055 Radical SAM superfamily ACU13_15105 PF02685 Glucokinase ACU13_15110 PF02685 Glucokinase ACU13_15120 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ACU13_15120 PF00271 Helicase conserved C-terminal domain ACU13_15120 PF04408 Helicase associated domain (HA2) ACU13_15120 PF11898 Domain of unknown function (DUF3418) ACU13_15120 PF00270 DEAD/DEAH box helicase ACU13_15125 PF00210 Ferritin-like domain ACU13_15130 PF00270 DEAD/DEAH box helicase ACU13_15130 PF00271 Helicase conserved C-terminal domain ACU13_15130 PF00570 HRDC domain ACU13_15130 PF16124 RecQ zinc-binding ACU13_15130 PF09382 RQC domain ACU13_15145 PF00849 RNA pseudouridylate synthase ACU13_15145 PF01479 S4 domain ACU13_15155 PF02203 Tar ligand binding domain homologue ACU13_15155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACU13_15155 PF00672 HAMP domain ACU13_15180 PF06508 Queuosine biosynthesis protein QueC ACU13_15190 PF04055 Radical SAM superfamily ACU13_15200 PF00691 OmpA family ACU13_15205 PF07676 WD40-like Beta Propeller Repeat ACU13_15205 PF04052 TolB amino-terminal domain ACU13_15215 PF02472 Biopolymer transport protein ExbD/TolR ACU13_15220 PF01618 MotA/TolQ/ExbB proton channel family ACU13_15225 PF03061 Thioesterase superfamily ACU13_15230 PF05496 Holliday junction DNA helicase RuvB P-loop domain ACU13_15230 PF05491 RuvB C-terminal winged helix domain ACU13_15230 PF17864 RuvB AAA lid domain ACU13_15235 PF02705 K+ potassium transporter ACU13_15240 PF07499 RuvA, C-terminal domain ACU13_15240 PF01330 RuvA N terminal domain ACU13_15245 PF02075 Crossover junction endodeoxyribonuclease RuvC ACU13_15250 PF01709 Transcriptional regulator ACU13_15265 PF00152 tRNA synthetases class II (D, K and N) ACU13_15265 PF01336 OB-fold nucleic acid binding domain ACU13_15265 PF02938 GAD domain ACU13_15280 PF07690 Major Facilitator Superfamily ACU13_15285 PF05506 Domain of unknown function (DUF756) ACU13_15285 PF04185 Phosphoesterase family ACU13_15295 PF13472 GDSL-like Lipase/Acylhydrolase family ACU13_15295 PF07859 alpha/beta hydrolase fold ACU13_15305 PF03466 LysR substrate binding domain ACU13_15305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACU13_15315 PF00005 ABC transporter ACU13_15315 PF12848 ABC transporter ACU13_15320 PF07715 TonB-dependent Receptor Plug Domain ACU13_15320 PF00593 TonB dependent receptor ACU13_15330 PF07715 TonB-dependent Receptor Plug Domain ACU13_15330 PF00593 TonB dependent receptor ACU13_15335 PF00593 TonB dependent receptor ACU13_15335 PF07715 TonB-dependent Receptor Plug Domain ACU13_15345 PF00999 Sodium/hydrogen exchanger family ACU13_15345 PF02254 TrkA-N domain ACU13_15365 PF07715 TonB-dependent Receptor Plug Domain ACU13_15365 PF07660 Secretin and TonB N terminus short domain ACU13_15365 PF00593 TonB dependent receptor ACU13_15375 PF04183 IucA / IucC family ACU13_15375 PF06276 Ferric iron reductase FhuF-like transporter ACU13_15380 PF07690 Major Facilitator Superfamily ACU13_15390 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ACU13_15390 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ACU13_15395 PF02654 Cobalamin-5-phosphate synthase ACU13_15405 PF02277 Phosphoribosyltransferase ACU13_15410 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase ACU13_15415 PF00155 Aminotransferase class I and II ACU13_15420 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP ACU13_15420 PF12557 Cob(I)alamin adenosyltransferase N terminal ACU13_15435 PF00593 TonB dependent receptor ACU13_15435 PF07715 TonB-dependent Receptor Plug Domain ACU13_15440 PF13276 HTH-like domain ACU13_15440 PF13683 Integrase core domain ACU13_15445 PF01527 Transposase ACU13_15450 PF10431 C-terminal, D2-small domain, of ClpB protein ACU13_15450 PF00004 ATPase family associated with various cellular activities (AAA) ACU13_15450 PF17871 AAA lid domain ACU13_15450 PF07724 AAA domain (Cdc48 subfamily) ACU13_15450 PF02861 Clp amino terminal domain, pathogenicity island component ACU13_15455 PF01541 GIY-YIG catalytic domain ACU13_15465 PF00488 MutS domain V ACU13_15465 PF05188 MutS domain II ACU13_15465 PF01624 MutS domain I ACU13_15465 PF05190 MutS family domain IV ACU13_15465 PF05192 MutS domain III ACU13_15475 PF00141 Peroxidase ACU13_15480 PF01479 S4 domain ACU13_15485 PF00665 Integrase core domain ACU13_15485 PF13936 Helix-turn-helix domain ACU13_15490 PF01554 MatE ACU13_15495 PF01245 Ribosomal protein L19 ACU13_15500 PF01746 tRNA (Guanine-1)-methyltransferase ACU13_15505 PF01782 RimM N-terminal domain ACU13_15505 PF05239 PRC-barrel domain ACU13_15510 PF00886 Ribosomal protein S16 ACU13_15520 PF03060 Nitronate monooxygenase ACU13_15535 PF02881 SRP54-type protein, helical bundle domain ACU13_15535 PF02978 Signal peptide binding domain ACU13_15535 PF00448 SRP54-type protein, GTPase domain ACU13_15540 PF01578 Cytochrome C assembly protein ACU13_15545 PF01263 Aldose 1-epimerase ACU13_15550 PF06964 Alpha-L-arabinofuranosidase C-terminal domain ACU13_15565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU13_15565 PF00512 His Kinase A (phospho-acceptor) domain ACU13_15565 PF08448 PAS fold ACU13_15565 PF13188 PAS domain ACU13_15565 PF00072 Response regulator receiver domain ACU13_15570 PF00512 His Kinase A (phospho-acceptor) domain ACU13_15570 PF01627 Hpt domain ACU13_15570 PF17149 Periplasmic sensor domain found in signal transduction proteins ACU13_15570 PF00072 Response regulator receiver domain ACU13_15570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU13_15570 PF00672 HAMP domain ACU13_15580 PF13581 Histidine kinase-like ATPase domain ACU13_15585 PF01740 STAS domain ACU13_15590 PF08678 Rsbr N terminal ACU13_15590 PF01740 STAS domain ACU13_15605 PF00183 Hsp90 protein ACU13_15605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU13_15610 PF12833 Helix-turn-helix domain ACU13_15630 PF18073 Rubredoxin metal binding domain ACU13_15635 PF01527 Transposase ACU13_15640 PF13683 Integrase core domain ACU13_15640 PF13276 HTH-like domain ACU13_15655 PF03527 RHS protein ACU13_15655 PF14220 Domain of unknown function (DUF4329) ACU13_15655 PF05593 RHS Repeat ACU13_15695 PF04717 Type VI secretion system, phage-baseplate injector ACU13_15705 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ACU13_15710 PF00510 Cytochrome c oxidase subunit III ACU13_15715 PF00115 Cytochrome C and Quinol oxidase polypeptide I ACU13_15720 PF06481 COX Aromatic Rich Motif ACU13_15720 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ACU13_15730 PF02401 LytB protein ACU13_15735 PF01252 Signal peptidase (SPase) II ACU13_15740 PF00133 tRNA synthetases class I (I, L, M and V) ACU13_15740 PF08264 Anticodon-binding domain of tRNA ACU13_15740 PF06827 Zinc finger found in FPG and IleRS ACU13_15745 PF01687 Riboflavin kinase ACU13_15745 PF06574 FAD synthetase ACU13_15750 PF03023 Lipid II flippase MurJ ACU13_15755 PF01649 Ribosomal protein S20 ACU13_15760 PF01926 50S ribosome-binding GTPase ACU13_15760 PF01018 GTP1/OBG ACU13_15765 PF01016 Ribosomal L27 protein ACU13_15770 PF00829 Ribosomal prokaryotic L21 protein ACU13_15775 PF00005 ABC transporter ACU13_15775 PF17755 UvrA DNA-binding domain ACU13_15775 PF17760 UvrA interaction domain ACU13_15790 PF00378 Enoyl-CoA hydratase/isomerase ACU13_15805 PF08281 Sigma-70, region 4 ACU13_15805 PF04542 Sigma-70 region 2 ACU13_15820 PF04377 Arginine-tRNA-protein transferase, C terminus ACU13_15820 PF04376 Arginine-tRNA-protein transferase, N terminus ACU13_15835 PF13340 Putative transposase of IS4/5 family (DUF4096) ACU13_15855 PF00593 TonB dependent receptor ACU13_15855 PF07715 TonB-dependent Receptor Plug Domain ACU13_15865 PF02358 Trehalose-phosphatase ACU13_15870 PF00723 Glycosyl hydrolases family 15 ACU13_15875 PF00982 Glycosyltransferase family 20 ACU13_15880 PF01011 PQQ enzyme repeat ACU13_15885 PF00672 HAMP domain ACU13_15885 PF02203 Tar ligand binding domain homologue ACU13_15885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACU13_15890 PF04134 Protein of unknown function, DUF393 ACU13_15905 PF00849 RNA pseudouridylate synthase ACU13_15910 PF13525 Outer membrane lipoprotein ACU13_15915 PF00795 Carbon-nitrogen hydrolase ACU13_15915 PF02540 NAD synthase ACU13_15925 PF02629 CoA binding domain ACU13_15925 PF00549 CoA-ligase ACU13_15930 PF08442 ATP-grasp domain ACU13_15930 PF00549 CoA-ligase ACU13_15935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU13_15935 PF00512 His Kinase A (phospho-acceptor) domain ACU13_15940 PF00072 Response regulator receiver domain ACU13_15940 PF02954 Bacterial regulatory protein, Fis family ACU13_15940 PF00158 Sigma-54 interaction domain ACU13_15945 PF02661 Fic/DOC family ACU13_15945 PF18543 Intracellular delivery domain ACU13_15950 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ACU13_15950 PF00437 Type II/IV secretion system protein ACU13_15965 PF08019 Phosphoethanolamine transferase EptA/EptB ACU13_15965 PF00884 Sulfatase ACU13_15970 PF00114 Pilin (bacterial filament) ACU13_15970 PF07963 Prokaryotic N-terminal methylation motif ACU13_15975 PF00482 Type II secretion system (T2SS), protein F ACU13_15980 PF01478 Type IV leader peptidase family ACU13_15980 PF06750 Bacterial Peptidase A24 N-terminal domain ACU13_15985 PF01121 Dephospho-CoA kinase ACU13_15990 PF01609 Transposase DDE domain ACU13_15990 PF05598 Transposase domain (DUF772) ACU13_16000 PF13936 Helix-turn-helix domain ACU13_16000 PF00665 Integrase core domain ACU13_16005 PF05598 Transposase domain (DUF772) ACU13_16015 PF01527 Transposase ACU13_16020 PF13276 HTH-like domain ACU13_16020 PF13683 Integrase core domain ACU13_16035 PF00512 His Kinase A (phospho-acceptor) domain ACU13_16035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU13_16035 PF00989 PAS fold ACU13_16035 PF11808 Phosphate regulon sensor protein PhoR ACU13_16040 PF00486 Transcriptional regulatory protein, C terminal ACU13_16040 PF00072 Response regulator receiver domain ACU13_16050 PF08443 RimK-like ATP-grasp domain ACU13_16050 PF18030 RimK PreATP-grasp domain ACU13_16055 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ACU13_16055 PF00128 Alpha amylase, catalytic domain ACU13_16085 PF05598 Transposase domain (DUF772) ACU13_16085 PF01609 Transposase DDE domain ACU13_16115 PF16671 Actin cross-linking domain ACU13_16115 PF04717 Type VI secretion system, phage-baseplate injector ACU13_16130 PF03797 Autotransporter beta-domain ACU13_16130 PF00657 GDSL-like Lipase/Acylhydrolase ACU13_16140 PF05690 Thiazole biosynthesis protein ThiG ACU13_16145 PF02390 Putative methyltransferase ACU13_16150 PF02080 TrkA-C domain ACU13_16150 PF03600 Citrate transporter ACU13_16165 PF01557 Fumarylacetoacetate (FAA) hydrolase family ACU13_16170 PF01741 Large-conductance mechanosensitive channel, MscL ACU13_16180 PF13276 HTH-like domain ACU13_16180 PF13683 Integrase core domain ACU13_16185 PF01527 Transposase ACU13_16195 PF08032 RNA 2'-O ribose methyltransferase substrate binding ACU13_16195 PF00588 SpoU rRNA Methylase family ACU13_16215 PF11838 ERAP1-like C-terminal domain ACU13_16215 PF01433 Peptidase family M1 domain ACU13_16220 PF00873 AcrB/AcrD/AcrF family ACU13_16225 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ACU13_16225 PF00529 HlyD membrane-fusion protein of T1SS ACU13_16230 PF00009 Elongation factor Tu GTP binding domain ACU13_16235 PF01507 Phosphoadenosine phosphosulfate reductase family ACU13_16240 PF00175 Oxidoreductase NAD-binding domain ACU13_16240 PF00258 Flavodoxin ACU13_16240 PF00667 FAD binding domain ACU13_16245 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ACU13_16245 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ACU13_16250 PF01507 Phosphoadenosine phosphosulfate reductase family ACU13_16270 PF00672 HAMP domain ACU13_16270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU13_16270 PF00512 His Kinase A (phospho-acceptor) domain ACU13_16270 PF01627 Hpt domain ACU13_16270 PF00072 Response regulator receiver domain ACU13_16285 PF03466 LysR substrate binding domain ACU13_16285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACU13_16290 PF10414 Sirohaem synthase dimerisation region ACU13_16290 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ACU13_16290 PF14824 Sirohaem biosynthesis protein central ACU13_16295 PF00291 Pyridoxal-phosphate dependent enzyme ACU13_16305 PF01661 Macro domain ACU13_16310 PF00274 Fructose-bisphosphate aldolase class-I ACU13_16315 PF00224 Pyruvate kinase, barrel domain ACU13_16315 PF02887 Pyruvate kinase, alpha/beta domain ACU13_16325 PF00162 Phosphoglycerate kinase ACU13_16335 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ACU13_16335 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ACU13_16350 PF04273 Putative phosphatase (DUF442) ACU13_16350 PF00753 Metallo-beta-lactamase superfamily ACU13_16360 PF00528 Binding-protein-dependent transport system inner membrane component ACU13_16365 PF03459 TOBE domain ACU13_16365 PF00005 ABC transporter ACU13_16465 PF00456 Transketolase, thiamine diphosphate binding domain ACU13_16465 PF02780 Transketolase, C-terminal domain ACU13_16465 PF02779 Transketolase, pyrimidine binding domain ACU13_16475 PF01527 Transposase ACU13_16480 PF13276 HTH-like domain ACU13_16480 PF13683 Integrase core domain ACU13_16485 PF05598 Transposase domain (DUF772) ACU13_16500 PF07584 Aerotolerance regulator N-terminal ACU13_16500 PF00092 von Willebrand factor type A domain ACU13_16520 PF07726 ATPase family associated with various cellular activities (AAA) ACU13_16520 PF17863 AAA lid domain ACU13_16525 PF07660 Secretin and TonB N terminus short domain ACU13_16525 PF03958 Bacterial type II/III secretion system short domain ACU13_16525 PF00263 Bacterial type II and III secretion system protein ACU13_16525 PF11741 AMIN domain ACU13_16550 PF00905 Penicillin binding protein transpeptidase domain ACU13_16550 PF00912 Transglycosylase ACU13_16550 PF17092 Penicillin-binding protein OB-like domain ACU13_16560 PF00285 Citrate synthase, C-terminal domain ACU13_16565 PF01197 Ribosomal protein L31 ACU13_16570 PF01156 Inosine-uridine preferring nucleoside hydrolase ACU13_16575 PF17191 RecG wedge domain ACU13_16575 PF00271 Helicase conserved C-terminal domain ACU13_16575 PF00270 DEAD/DEAH box helicase ACU13_16580 PF01042 Endoribonuclease L-PSP ACU13_16585 PF02824 TGS domain ACU13_16585 PF04607 Region found in RelA / SpoT proteins ACU13_16585 PF13291 ACT domain ACU13_16590 PF01192 RNA polymerase Rpb6 ACU13_16595 PF00625 Guanylate kinase ACU13_16600 PF03755 YicC-like family, N-terminal region ACU13_16600 PF08340 Domain of unknown function (DUF1732) ACU13_16605 PF03725 3' exoribonuclease family, domain 2 ACU13_16605 PF01138 3' exoribonuclease family, domain 1 ACU13_16610 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ACU13_16615 PF01725 Ham1 family ACU13_16620 PF06969 HemN C-terminal domain ACU13_16620 PF04055 Radical SAM superfamily ACU13_16635 PF00557 Metallopeptidase family M24 ACU13_16645 PF05195 Aminopeptidase P, N-terminal domain ACU13_16645 PF00557 Metallopeptidase family M24 ACU13_16650 PF03695 Uncharacterised protein family (UPF0149) ACU13_16660 PF05164 Cell division protein ZapA ACU13_16665 PF01812 5-formyltetrahydrofolate cyclo-ligase family ACU13_16675 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ACU13_16685 PF13369 Transglutaminase-like superfamily ACU13_16690 PF00301 Rubredoxin ACU13_16695 PF02581 Thiamine monophosphate synthase ACU13_16705 PF00202 Aminotransferase class-III ACU13_16715 PF00127 Copper binding proteins, plastocyanin/azurin family ACU13_16725 PF00155 Aminotransferase class I and II ACU13_16740 PF00034 Cytochrome c ACU13_16740 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ACU13_16745 PF01593 Flavin containing amine oxidoreductase ACU13_16760 PF00202 Aminotransferase class-III ACU13_16765 PF00520 Ion transport protein ACU13_16765 PF00027 Cyclic nucleotide-binding domain ACU13_16800 PF01062 Bestrophin, RFP-TM, chloride channel ACU13_16810 PF01225 Mur ligase family, catalytic domain ACU13_16810 PF08245 Mur ligase middle domain ACU13_16810 PF02875 Mur ligase family, glutamate ligase domain ACU13_16820 PF00365 Phosphofructokinase ACU13_16830 PF05598 Transposase domain (DUF772) ACU13_16850 PF03030 Inorganic H+ pyrophosphatase ACU13_16860 PF00719 Inorganic pyrophosphatase ACU13_16870 PF00593 TonB dependent receptor ACU13_16870 PF07715 TonB-dependent Receptor Plug Domain ACU13_16875 PF12833 Helix-turn-helix domain ACU13_16880 PF18500 CadC C-terminal domain 1 ACU13_16880 PF00486 Transcriptional regulatory protein, C terminal ACU13_16885 PF13667 ThiC-associated domain ACU13_16885 PF01964 Radical SAM ThiC family ACU13_16890 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ACU13_16890 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ACU13_16895 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ACU13_16895 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ACU13_16895 PF00205 Thiamine pyrophosphate enzyme, central domain ACU13_16905 PF00291 Pyridoxal-phosphate dependent enzyme ACU13_16910 PF00682 HMGL-like ACU13_16910 PF08502 LeuA allosteric (dimerisation) domain ACU13_16915 PF00180 Isocitrate/isopropylmalate dehydrogenase ACU13_16920 PF08241 Methyltransferase domain ACU13_16925 PF00694 Aconitase C-terminal domain ACU13_16930 PF00330 Aconitase family (aconitate hydratase) ACU13_16935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACU13_16940 PF00990 Diguanylate cyclase, GGDEF domain ACU13_16940 PF17158 Membrane-associated sensor, integral membrane domain ACU13_16955 PF02321 Outer membrane efflux protein ACU13_16960 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ACU13_16965 PF03279 Bacterial lipid A biosynthesis acyltransferase ACU13_16995 PF01515 Phosphate acetyl/butaryl transferase ACU13_16995 PF03949 Malic enzyme, NAD binding domain ACU13_16995 PF00390 Malic enzyme, N-terminal domain ACU13_17000 PF00375 Sodium:dicarboxylate symporter family ACU13_17010 PF00512 His Kinase A (phospho-acceptor) domain ACU13_17010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU13_17015 PF07690 Major Facilitator Superfamily ACU13_17025 PF03466 LysR substrate binding domain ACU13_17025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACU13_17045 PF00196 Bacterial regulatory proteins, luxR family ACU13_17045 PF00072 Response regulator receiver domain ACU13_17055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU13_17055 PF08521 Two-component sensor kinase N-terminal ACU13_17055 PF00512 His Kinase A (phospho-acceptor) domain ACU13_17060 PF00486 Transcriptional regulatory protein, C terminal ACU13_17060 PF00072 Response regulator receiver domain ACU13_17070 PF03600 Citrate transporter ACU13_17075 PF00106 short chain dehydrogenase ACU13_17080 PF00356 Bacterial regulatory proteins, lacI family ACU13_17095 PF00128 Alpha amylase, catalytic domain ACU13_17110 PF03193 RsgA GTPase ACU13_17115 PF00155 Aminotransferase class I and II ACU13_17130 PF01522 Polysaccharide deacetylase ACU13_17135 PF00462 Glutaredoxin ACU13_17155 PF01979 Amidohydrolase family ACU13_17160 PF01979 Amidohydrolase family ACU13_17180 PF01327 Polypeptide deformylase ACU13_17185 PF03960 ArsC family ACU13_17195 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ACU13_17195 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ACU13_17230 PF00593 TonB dependent receptor ACU13_17230 PF07715 TonB-dependent Receptor Plug Domain ACU13_17240 PF07702 UTRA domain ACU13_17240 PF00392 Bacterial regulatory proteins, gntR family ACU13_17250 PF03958 Bacterial type II/III secretion system short domain ACU13_17250 PF00263 Bacterial type II and III secretion system protein ACU13_17260 PF10741 Type II secretion system (T2SS), protein M subtype b ACU13_17265 PF05137 Fimbrial assembly protein (PilN) ACU13_17270 PF03934 Type II secretion system (T2SS), protein K ACU13_17280 PF07963 Prokaryotic N-terminal methylation motif ACU13_17285 PF12019 Type II transport protein GspH ACU13_17290 PF08334 Type II secretion system (T2SS), protein G ACU13_17295 PF00482 Type II secretion system (T2SS), protein F ACU13_17300 PF00437 Type II/IV secretion system protein ACU13_17300 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ACU13_17305 PF00082 Subtilase family ACU13_17305 PF04151 Bacterial pre-peptidase C-terminal domain ACU13_17310 PF03895 YadA-like membrane anchor domain ACU13_17310 PF13018 Extended Signal Peptide of Type V secretion system ACU13_17310 PF05658 Head domain of trimeric autotransporter adhesin ACU13_17310 PF05662 Coiled stalk of trimeric autotransporter adhesin ACU13_17315 PF02769 AIR synthase related protein, C-terminal domain ACU13_17315 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal ACU13_17315 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ACU13_17320 PF10411 Disulfide bond isomerase protein N-terminus ACU13_17320 PF13098 Thioredoxin-like domain ACU13_17325 PF00589 Phage integrase family ACU13_17325 PF02899 Phage integrase, N-terminal SAM-like domain ACU13_17340 PF03739 Lipopolysaccharide export system permease LptF/LptG ACU13_17350 PF02789 Cytosol aminopeptidase family, N-terminal domain ACU13_17350 PF00883 Cytosol aminopeptidase family, catalytic domain ACU13_17365 PF10458 Valyl tRNA synthetase tRNA binding arm ACU13_17365 PF00133 tRNA synthetases class I (I, L, M and V) ACU13_17365 PF08264 Anticodon-binding domain of tRNA ACU13_17370 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain ACU13_17370 PF01464 Transglycosylase SLT domain ACU13_17375 PF00544 Pectate lyase ACU13_17390 PF01066 CDP-alcohol phosphatidyltransferase ACU13_17400 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ACU13_17400 PF04073 Aminoacyl-tRNA editing domain ACU13_17400 PF03129 Anticodon binding domain ACU13_17405 PF00816 H-NS histone family ACU13_17415 PF02405 Permease MlaE ACU13_17420 PF00005 ABC transporter ACU13_17425 PF02470 MlaD protein ACU13_17425 PF03886 ABC-type transport auxiliary lipoprotein component ACU13_17445 PF05045 Rhamnan synthesis protein F ACU13_17445 PF14307 Glycosyltransferase WbsX ACU13_17450 PF01144 Coenzyme A transferase ACU13_17455 PF01144 Coenzyme A transferase ACU13_17460 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ACU13_17460 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ACU13_17460 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ACU13_17460 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ACU13_17465 PF00483 Nucleotidyl transferase ACU13_17465 PF01050 Mannose-6-phosphate isomerase ACU13_17470 PF04321 RmlD substrate binding domain ACU13_17475 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase ACU13_17480 PF00483 Nucleotidyl transferase ACU13_17485 PF16363 GDP-mannose 4,6 dehydratase ACU13_17490 PF01012 Electron transfer flavoprotein domain ACU13_17495 PF00766 Electron transfer flavoprotein FAD-binding domain ACU13_17495 PF01012 Electron transfer flavoprotein domain ACU13_17505 PF01040 UbiA prenyltransferase family ACU13_17510 PF04030 D-arabinono-1,4-lactone oxidase ACU13_17510 PF01565 FAD binding domain ACU13_17515 PF00106 short chain dehydrogenase ACU13_17525 PF01370 NAD dependent epimerase/dehydratase family ACU13_17530 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ACU13_17530 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACU13_17550 PF01209 ubiE/COQ5 methyltransferase family ACU13_17560 PF14307 Glycosyltransferase WbsX ACU13_17560 PF05045 Rhamnan synthesis protein F ACU13_17565 PF00535 Glycosyl transferase family 2 ACU13_17570 PF00132 Bacterial transferase hexapeptide (six repeats) ACU13_17575 PF00005 ABC transporter ACU13_17585 PF01053 Cys/Met metabolism PLP-dependent enzyme ACU13_17590 PF00571 CBS domain ACU13_17590 PF00291 Pyridoxal-phosphate dependent enzyme ACU13_17610 PF00437 Type II/IV secretion system protein ACU13_17620 PF14497 Glutathione S-transferase, C-terminal domain ACU13_17620 PF02798 Glutathione S-transferase, N-terminal domain ACU13_17630 PF00271 Helicase conserved C-terminal domain ACU13_17630 PF00270 DEAD/DEAH box helicase ACU13_17635 PF01242 6-pyruvoyl tetrahydropterin synthase ACU13_17650 PF13185 GAF domain ACU13_17660 PF13419 Haloacid dehalogenase-like hydrolase ACU13_17665 PF00817 impB/mucB/samB family ACU13_17665 PF11799 impB/mucB/samB family C-terminal domain ACU13_17670 PF07977 FabA-like domain ACU13_17675 PF02801 Beta-ketoacyl synthase, C-terminal domain ACU13_17675 PF00109 Beta-ketoacyl synthase, N-terminal domain ACU13_17685 PF01432 Peptidase family M3 ACU13_17710 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ACU13_17720 PF05598 Transposase domain (DUF772) ACU13_17725 PF01609 Transposase DDE domain ACU13_17725 PF05598 Transposase domain (DUF772) ACU13_17740 PF01380 SIS domain ACU13_17745 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ACU13_17750 PF00005 ABC transporter ACU13_17760 PF00005 ABC transporter ACU13_17760 PF02687 FtsX-like permease family ACU13_17760 PF12704 MacB-like periplasmic core domain ACU13_17770 PF12704 MacB-like periplasmic core domain ACU13_17770 PF00005 ABC transporter ACU13_17770 PF02687 FtsX-like permease family ACU13_17775 PF02954 Bacterial regulatory protein, Fis family ACU13_17775 PF00158 Sigma-54 interaction domain ACU13_17775 PF00072 Response regulator receiver domain ACU13_17780 PF00512 His Kinase A (phospho-acceptor) domain ACU13_17780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU13_17780 PF00989 PAS fold ACU13_17785 PF00132 Bacterial transferase hexapeptide (six repeats) ACU13_17785 PF14602 Hexapeptide repeat of succinyl-transferase ACU13_17785 PF12804 MobA-like NTP transferase domain ACU13_17795 PF01817 Chorismate mutase type II ACU13_17800 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ACU13_17805 PF02874 ATP synthase alpha/beta family, beta-barrel domain ACU13_17805 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ACU13_17810 PF00231 ATP synthase ACU13_17815 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ACU13_17815 PF00306 ATP synthase alpha/beta chain, C terminal domain ACU13_17815 PF02874 ATP synthase alpha/beta family, beta-barrel domain ACU13_17820 PF00213 ATP synthase delta (OSCP) subunit ACU13_17825 PF00430 ATP synthase B/B' CF(0) ACU13_17830 PF00137 ATP synthase subunit C ACU13_17835 PF00119 ATP synthase A chain ACU13_17855 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACU13_17855 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ACU13_17865 PF02817 e3 binding domain ACU13_17865 PF00364 Biotin-requiring enzyme ACU13_17865 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ACU13_17895 PF03180 NLPA lipoprotein ACU13_17900 PF00528 Binding-protein-dependent transport system inner membrane component ACU13_17905 PF00005 ABC transporter ACU13_17905 PF09383 NIL domain ACU13_17910 PF00892 EamA-like transporter family ACU13_17915 PF04461 Protein of unknown function (DUF520) ACU13_17945 PF13419 Haloacid dehalogenase-like hydrolase ACU13_17950 PF01479 S4 domain ACU13_17950 PF00849 RNA pseudouridylate synthase ACU13_17955 PF08468 Methyltransferase small domain N-terminal ACU13_17955 PF05175 Methyltransferase small domain ACU13_17970 PF07995 Glucose / Sorbosone dehydrogenase ACU13_17980 PF00989 PAS fold ACU13_17980 PF00512 His Kinase A (phospho-acceptor) domain ACU13_17980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU13_18000 PF01168 Alanine racemase, N-terminal domain ACU13_18000 PF00842 Alanine racemase, C-terminal domain ACU13_18005 PF01266 FAD dependent oxidoreductase ACU13_18010 PF01037 Lrp/AsnC ligand binding domain ACU13_18020 PF01641 SelR domain ACU13_18030 PF01618 MotA/TolQ/ExbB proton channel family ACU13_18035 PF00691 OmpA family ACU13_18035 PF13677 Membrane MotB of proton-channel complex MotA/MotB ACU13_18050 PF00486 Transcriptional regulatory protein, C terminal ACU13_18050 PF00072 Response regulator receiver domain ACU13_18055 PF00072 Response regulator receiver domain ACU13_18055 PF08448 PAS fold ACU13_18055 PF00512 His Kinase A (phospho-acceptor) domain ACU13_18055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU13_18055 PF13188 PAS domain ACU13_18065 PF04151 Bacterial pre-peptidase C-terminal domain ACU13_18065 PF00082 Subtilase family ACU13_18080 PF01061 ABC-2 type transporter ACU13_18085 PF00005 ABC transporter ACU13_18090 PF00999 Sodium/hydrogen exchanger family ACU13_18095 PF02469 Fasciclin domain ACU13_18100 PF03167 Uracil DNA glycosylase superfamily ACU13_18110 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ACU13_18125 PF00248 Aldo/keto reductase family ACU13_18140 PF01431 Peptidase family M13 ACU13_18140 PF05649 Peptidase family M13 ACU13_18155 PF13520 Amino acid permease ACU13_18165 PF00072 Response regulator receiver domain ACU13_18165 PF04397 LytTr DNA-binding domain ACU13_18170 PF02743 Cache domain ACU13_18170 PF00672 HAMP domain ACU13_18170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU13_18170 PF06580 Histidine kinase ACU13_18185 PF01339 CheB methylesterase ACU13_18185 PF08448 PAS fold ACU13_18185 PF03705 CheR methyltransferase, all-alpha domain ACU13_18185 PF01739 CheR methyltransferase, SAM binding domain ACU13_18200 PF00158 Sigma-54 interaction domain ACU13_18200 PF00072 Response regulator receiver domain ACU13_18200 PF02954 Bacterial regulatory protein, Fis family ACU13_18210 PF01654 Cytochrome bd terminal oxidase subunit I ACU13_18215 PF02322 Cytochrome bd terminal oxidase subunit II ACU13_18230 PF08240 Alcohol dehydrogenase GroES-like domain ACU13_18230 PF13823 Alcohol dehydrogenase GroES-associated ACU13_18230 PF00107 Zinc-binding dehydrogenase ACU13_18270 PF00593 TonB dependent receptor ACU13_18270 PF07715 TonB-dependent Receptor Plug Domain ACU13_18285 PF00005 ABC transporter ACU13_18290 PF03377 TAL effector repeat ACU13_18295 PF05598 Transposase domain (DUF772) ACU13_18300 PF00456 Transketolase, thiamine diphosphate binding domain ACU13_18300 PF17831 Pyruvate dehydrogenase E1 component middle domain ACU13_18310 PF13276 HTH-like domain ACU13_18310 PF13683 Integrase core domain ACU13_18315 PF04264 YceI-like domain ACU13_18320 PF00881 Nitroreductase family ACU13_18350 PF02592 Putative vitamin uptake transporter ACU13_18355 PF03710 Glutamate-ammonia ligase adenylyltransferase ACU13_18355 PF08335 GlnD PII-uridylyltransferase ACU13_18365 PF08450 SMP-30/Gluconolactonase/LRE-like region ACU13_18380 PF00793 DAHP synthetase I family ACU13_18385 PF07715 TonB-dependent Receptor Plug Domain ACU13_18385 PF00593 TonB dependent receptor ACU13_18395 PF00118 TCP-1/cpn60 chaperonin family ACU13_18400 PF00166 Chaperonin 10 Kd subunit ACU13_18430 PF03458 UPF0126 domain ACU13_18435 PF04542 Sigma-70 region 2 ACU13_18435 PF04545 Sigma-70, region 4 ACU13_18440 PF03167 Uracil DNA glycosylase superfamily ACU13_18445 PF01339 CheB methylesterase ACU13_18445 PF00072 Response regulator receiver domain ACU13_18450 PF18075 FtsX extracellular domain ACU13_18455 PF00005 ABC transporter ACU13_18460 PF12300 ATP-dependent RNA helicase RhlB ACU13_18460 PF00270 DEAD/DEAH box helicase ACU13_18460 PF00271 Helicase conserved C-terminal domain ACU13_18465 PF00085 Thioredoxin ACU13_18470 PF07497 Rho termination factor, RNA-binding domain ACU13_18470 PF07498 Rho termination factor, N-terminal domain ACU13_18470 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ACU13_18485 PF03971 Monomeric isocitrate dehydrogenase ACU13_18500 PF14489 QueF-like protein ACU13_18500 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term ACU13_18510 PF07687 Peptidase dimerisation domain ACU13_18510 PF01546 Peptidase family M20/M25/M40 ACU13_18515 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ACU13_18520 PF00873 AcrB/AcrD/AcrF family ACU13_18525 PF00873 AcrB/AcrD/AcrF family ACU13_18550 PF07063 Domain of unknown function (DUF1338) ACU13_18590 PF01427 D-ala-D-ala dipeptidase ACU13_18595 PF01510 N-acetylmuramoyl-L-alanine amidase ACU13_18605 PF13378 Enolase C-terminal domain-like ACU13_18605 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ACU13_18615 PF13520 Amino acid permease ACU13_18630 PF05360 yiaA/B two helix domain ACU13_18635 PF07995 Glucose / Sorbosone dehydrogenase ACU13_18645 PF14310 Fibronectin type III-like domain ACU13_18645 PF00933 Glycosyl hydrolase family 3 N terminal domain ACU13_18645 PF01915 Glycosyl hydrolase family 3 C-terminal domain ACU13_18650 PF02152 Dihydroneopterin aldolase ACU13_18655 PF00814 Glycoprotease family ACU13_18660 PF01165 Ribosomal protein S21 ACU13_18665 PF09424 Yqey-like protein ACU13_18670 PF03631 Virulence factor BrkB ACU13_18675 PF01807 CHC2 zinc finger ACU13_18675 PF10410 DnaB-helicase binding domain of primase ACU13_18675 PF08278 DNA primase DnaG DnaB-binding ACU13_18675 PF08275 DNA primase catalytic core, N-terminal domain ACU13_18685 PF13593 SBF-like CPA transporter family (DUF4137) ACU13_18695 PF01040 UbiA prenyltransferase family ACU13_18720 PF00510 Cytochrome c oxidase subunit III ACU13_18725 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 ACU13_18735 PF00115 Cytochrome C and Quinol oxidase polypeptide I ACU13_18740 PF02790 Cytochrome C oxidase subunit II, transmembrane domain ACU13_18740 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ACU13_18750 PF14850 DNA-binding domain of Proline dehydrogenase ACU13_18750 PF01619 Proline dehydrogenase ACU13_18750 PF00171 Aldehyde dehydrogenase family ACU13_18750 PF18327 Proline utilization A proline dehydrogenase N-terminal domain ACU13_18765 PF01527 Transposase ACU13_18795 PF00579 tRNA synthetases class I (W and Y) ACU13_18800 PF04225 Opacity-associated protein A LysM-like domain ACU13_18800 PF01551 Peptidase family M23 ACU13_18805 PF03702 Anhydro-N-acetylmuramic acid kinase ACU13_18815 PF07690 Major Facilitator Superfamily ACU13_18820 PF03372 Endonuclease/Exonuclease/phosphatase family ACU13_18845 PF01447 Thermolysin metallopeptidase, catalytic domain ACU13_18845 PF02868 Thermolysin metallopeptidase, alpha-helical domain ACU13_18845 PF07504 Fungalysin/Thermolysin Propeptide Motif ACU13_18845 PF01483 Proprotein convertase P-domain ACU13_18860 PF13244 Domain of unknown function (DUF4040) ACU13_18860 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter ACU13_18860 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ACU13_18860 PF00361 Proton-conducting membrane transporter ACU13_18865 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ACU13_18870 PF00361 Proton-conducting membrane transporter ACU13_18880 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) ACU13_18885 PF03334 Na+/H+ antiporter subunit ACU13_18890 PF04209 homogentisate 1,2-dioxygenase ACU13_18900 PF01527 Transposase ACU13_18905 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ACU13_18910 PF01047 MarR family ACU13_18920 PF00854 POT family ACU13_18925 PF03301 Tryptophan 2,3-dioxygenase ACU13_18935 PF00676 Dehydrogenase E1 component ACU13_18940 PF02780 Transketolase, C-terminal domain ACU13_18940 PF02779 Transketolase, pyrimidine binding domain ACU13_18950 PF02817 e3 binding domain ACU13_18950 PF00364 Biotin-requiring enzyme ACU13_18950 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ACU13_18960 PF05598 Transposase domain (DUF772) ACU13_18960 PF01609 Transposase DDE domain ACU13_18965 PF01609 Transposase DDE domain ACU13_18965 PF05598 Transposase domain (DUF772) ACU13_18975 PF00271 Helicase conserved C-terminal domain ACU13_18975 PF00270 DEAD/DEAH box helicase ACU13_18985 PF06903 VirK protein ACU13_19000 PF00106 short chain dehydrogenase ACU13_19010 PF05598 Transposase domain (DUF772) ACU13_19025 PF03377 TAL effector repeat ACU13_19030 PF03377 TAL effector repeat ACU13_19035 PF01527 Transposase ACU13_19040 PF13683 Integrase core domain ACU13_19040 PF13276 HTH-like domain ACU13_19060 PF00268 Ribonucleotide reductase, small chain ACU13_19065 PF02867 Ribonucleotide reductase, barrel domain ACU13_19065 PF00317 Ribonucleotide reductase, all-alpha domain ACU13_19065 PF03477 ATP cone domain ACU13_19075 PF00583 Acetyltransferase (GNAT) family ACU13_19075 PF13380 CoA binding domain ACU13_19075 PF13607 Succinyl-CoA ligase like flavodoxin domain ACU13_19085 PF01769 Divalent cation transporter ACU13_19085 PF00571 CBS domain ACU13_19085 PF03448 MgtE intracellular N domain ACU13_19090 PF00999 Sodium/hydrogen exchanger family ACU13_19090 PF02254 TrkA-N domain ACU13_19105 PF01609 Transposase DDE domain ACU13_19105 PF05598 Transposase domain (DUF772) ACU13_19110 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ACU13_19110 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ACU13_19115 PF00723 Glycosyl hydrolases family 15 ACU13_19130 PF05166 YcgL domain ACU13_19135 PF02801 Beta-ketoacyl synthase, C-terminal domain ACU13_19135 PF00109 Beta-ketoacyl synthase, N-terminal domain ACU13_19145 PF00535 Glycosyl transferase family 2 ACU13_19210 PF07977 FabA-like domain ACU13_19215 PF01553 Acyltransferase ACU13_19225 PF00550 Phosphopantetheine attachment site ACU13_19230 PF04820 Tryptophan halogenase ACU13_19245 PF00665 Integrase core domain ACU13_19245 PF13936 Helix-turn-helix domain ACU13_19270 PF01218 Coproporphyrinogen III oxidase ACU13_19280 PF01367 5'-3' exonuclease, C-terminal SAM fold ACU13_19280 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ACU13_19280 PF00476 DNA polymerase family A ACU13_19280 PF01612 3'-5' exonuclease ACU13_19325 PF14602 Hexapeptide repeat of succinyl-transferase ACU13_19325 PF12464 Maltose acetyltransferase ACU13_19335 PF00580 UvrD/REP helicase N-terminal domain ACU13_19335 PF13361 UvrD-like helicase C-terminal domain ACU13_19350 PF13091 PLD-like domain ACU13_19350 PF13396 Phospholipase_D-nuclease N-terminal ACU13_19355 PF03466 LysR substrate binding domain ACU13_19355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACU13_19360 PF03737 Aldolase/RraA ACU13_19365 PF04303 PrpF protein ACU13_19370 PF04909 Amidohydrolase ACU13_19375 PF00471 Ribosomal protein L33 ACU13_19380 PF00830 Ribosomal L28 family ACU13_19395 PF02527 rRNA small subunit methyltransferase G ACU13_19400 PF09423 PhoD-like phosphatase ACU13_19400 PF16655 PhoD-like phosphatase, N-terminal domain ACU13_19405 PF16655 PhoD-like phosphatase, N-terminal domain ACU13_19405 PF09423 PhoD-like phosphatase ACU13_19410 PF01648 4'-phosphopantetheinyl transferase superfamily ACU13_19415 PF04226 Transglycosylase associated protein ACU13_19425 PF03372 Endonuclease/Exonuclease/phosphatase family ACU13_19435 PF00474 Sodium:solute symporter family ACU13_19440 PF04341 Protein of unknown function, DUF485 ACU13_19450 PF16177 Acetyl-coenzyme A synthetase N-terminus ACU13_19450 PF00501 AMP-binding enzyme ACU13_19450 PF13193 AMP-binding enzyme C-terminal domain ACU13_19455 PF00196 Bacterial regulatory proteins, luxR family ACU13_19455 PF00072 Response regulator receiver domain ACU13_19475 PF09339 IclR helix-turn-helix domain ACU13_19475 PF01614 Bacterial transcriptional regulator ACU13_19480 PF02659 Putative manganese efflux pump ACU13_19485 PF00512 His Kinase A (phospho-acceptor) domain ACU13_19485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU13_19500 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain ACU13_19500 PF06165 Glycosyltransferase family 36 ACU13_19515 PF01011 PQQ enzyme repeat ACU13_19515 PF13360 PQQ-like domain ACU13_19515 PF13570 PQQ-like domain ACU13_19535 PF01432 Peptidase family M3 ACU13_19550 PF00472 RF-1 domain ACU13_19560 PF00849 RNA pseudouridylate synthase ACU13_19575 PF03109 ABC1 family ACU13_19590 PF01820 D-ala D-ala ligase N-terminus ACU13_19590 PF07478 D-ala D-ala ligase C-terminus ACU13_19605 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family ACU13_19610 PF00501 AMP-binding enzyme ACU13_19615 PF03692 Putative zinc- or iron-chelating domain ACU13_19620 PF00561 alpha/beta hydrolase fold ACU13_19625 PF02661 Fic/DOC family ACU13_19625 PF13784 Fic/DOC family N-terminal ACU13_19630 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ACU13_19630 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ACU13_19645 PF00588 SpoU rRNA Methylase family ACU13_19650 PF07690 Major Facilitator Superfamily ACU13_19665 PF00158 Sigma-54 interaction domain ACU13_19665 PF02954 Bacterial regulatory protein, Fis family ACU13_19665 PF00072 Response regulator receiver domain ACU13_19670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU13_19675 PF00205 Thiamine pyrophosphate enzyme, central domain ACU13_19675 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ACU13_19675 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ACU13_19685 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ACU13_19685 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ACU13_19690 PF02556 Preprotein translocase subunit SecB ACU13_19695 PF00581 Rhodanese-like domain ACU13_19735 PF02803 Thiolase, C-terminal domain ACU13_19735 PF00108 Thiolase, N-terminal domain ACU13_19750 PF05598 Transposase domain (DUF772) ACU13_19750 PF01609 Transposase DDE domain ACU13_19755 PF05598 Transposase domain (DUF772) ACU13_19755 PF01609 Transposase DDE domain ACU13_19770 PF00080 Copper/zinc superoxide dismutase (SODC) ACU13_19775 PF00080 Copper/zinc superoxide dismutase (SODC) ACU13_19780 PF00072 Response regulator receiver domain ACU13_19780 PF02954 Bacterial regulatory protein, Fis family ACU13_19780 PF00158 Sigma-54 interaction domain ACU13_19785 PF00989 PAS fold ACU13_19785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU13_19785 PF00512 His Kinase A (phospho-acceptor) domain ACU13_19790 PF00909 Ammonium Transporter Family ACU13_19795 PF00543 Nitrogen regulatory protein P-II ACU13_19800 PF03951 Glutamine synthetase, beta-Grasp domain ACU13_19800 PF00120 Glutamine synthetase, catalytic domain ACU13_19805 PF02673 Bacitracin resistance protein BacA ACU13_19845 PF03061 Thioesterase superfamily ACU13_19850 PF13091 PLD-like domain ACU13_19865 PF01883 Iron-sulfur cluster assembly protein ACU13_19865 PF10609 NUBPL iron-transfer P-loop NTPase ACU13_19885 PF01381 Helix-turn-helix ACU13_19890 PF07804 HipA-like C-terminal domain ACU13_19890 PF13657 HipA N-terminal domain ACU13_19895 PF10017 Histidine-specific methyltransferase, SAM-dependent ACU13_19900 PF03781 Sulfatase-modifying factor enzyme 1 ACU13_19900 PF12867 DinB superfamily ACU13_19910 PF00528 Binding-protein-dependent transport system inner membrane component ACU13_19915 PF00005 ABC transporter ACU13_19915 PF00571 CBS domain ACU13_19930 PF00005 ABC transporter ACU13_19940 PF01546 Peptidase family M20/M25/M40 ACU13_19940 PF07687 Peptidase dimerisation domain ACU13_19945 PF01734 Patatin-like phospholipase ACU13_19950 PF00593 TonB dependent receptor ACU13_19950 PF07715 TonB-dependent Receptor Plug Domain ACU13_19955 PF01037 Lrp/AsnC ligand binding domain ACU13_19960 PF00351 Biopterin-dependent aromatic amino acid hydroxylase ACU13_19980 PF00356 Bacterial regulatory proteins, lacI family ACU13_19995 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ACU13_19995 PF02806 Alpha amylase, C-terminal all-beta domain ACU13_19995 PF00128 Alpha amylase, catalytic domain ACU13_20000 PF00128 Alpha amylase, catalytic domain ACU13_20000 PF16657 Maltogenic Amylase, C-terminal domain ACU13_20005 PF11896 Domain of unknown function (DUF3416) ACU13_20005 PF00128 Alpha amylase, catalytic domain ACU13_20010 PF05598 Transposase domain (DUF772) ACU13_20015 PF05598 Transposase domain (DUF772) ACU13_20020 PF01609 Transposase DDE domain ACU13_20020 PF05598 Transposase domain (DUF772) ACU13_20030 PF01527 Transposase ACU13_20070 PF13426 PAS domain ACU13_20070 PF01590 GAF domain ACU13_20070 PF08446 PAS fold ACU13_20070 PF00360 Phytochrome region ACU13_20075 PF01126 Heme oxygenase ACU13_20080 PF07690 Major Facilitator Superfamily ACU13_20085 PF01263 Aldose 1-epimerase ACU13_20095 PF02810 SEC-C motif ACU13_20100 PF01925 Sulfite exporter TauE/SafE ACU13_20135 PF01227 GTP cyclohydrolase I ACU13_20160 PF00083 Sugar (and other) transporter ACU13_20220 PF05532 CsbD-like ACU13_20240 PF02868 Thermolysin metallopeptidase, alpha-helical domain ACU13_20240 PF01447 Thermolysin metallopeptidase, catalytic domain ACU13_20240 PF16485 Protealysin propeptide ACU13_20245 PF13344 Haloacid dehalogenase-like hydrolase ACU13_20245 PF00293 NUDIX domain ACU13_20270 PF08946 Osmosensory transporter coiled coil ACU13_20270 PF00083 Sugar (and other) transporter ACU13_20290 PF01609 Transposase DDE domain ACU13_20290 PF05598 Transposase domain (DUF772) ACU13_20295 PF01527 Transposase ACU13_20300 PF13276 HTH-like domain ACU13_20300 PF13683 Integrase core domain ACU13_20305 PF00294 pfkB family carbohydrate kinase ACU13_20315 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase ACU13_20315 PF12241 Trans-2-enoyl-CoA reductase catalytic region ACU13_20315 PF07055 Enoyl reductase FAD binding domain ACU13_20330 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family ACU13_20335 PF01070 FMN-dependent dehydrogenase ACU13_20340 PF05598 Transposase domain (DUF772) ACU13_20340 PF01609 Transposase DDE domain ACU13_20350 PF07715 TonB-dependent Receptor Plug Domain ACU13_20350 PF00593 TonB dependent receptor ACU13_20355 PF00155 Aminotransferase class I and II ACU13_20360 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain ACU13_20380 PF03006 Haemolysin-III related ACU13_20385 PF00271 Helicase conserved C-terminal domain ACU13_20385 PF00270 DEAD/DEAH box helicase ACU13_20385 PF09369 Domain of unknown function (DUF1998) ACU13_20435 PF01645 Conserved region in glutamate synthase ACU13_20435 PF04898 Glutamate synthase central domain ACU13_20435 PF01493 GXGXG motif ACU13_20435 PF00310 Glutamine amidotransferases class-II ACU13_20440 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ACU13_20440 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACU13_20450 PF05598 Transposase domain (DUF772) ACU13_20455 PF13520 Amino acid permease ACU13_20465 PF02646 RmuC family ACU13_20475 PF00255 Glutathione peroxidase ACU13_20480 PF04333 MlaA lipoprotein ACU13_20490 PF05494 MlaC protein ACU13_20495 PF02470 MlaD protein ACU13_20500 PF02405 Permease MlaE ACU13_20505 PF00005 ABC transporter ACU13_20530 PF17946 RecC C-terminal domain ACU13_20535 PF12705 PD-(D/E)XK nuclease superfamily ACU13_20535 PF00580 UvrD/REP helicase N-terminal domain ACU13_20535 PF13361 UvrD-like helicase C-terminal domain ACU13_20540 PF13538 UvrD-like helicase C-terminal domain ACU13_20545 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB ACU13_20550 PF01381 Helix-turn-helix ACU13_20635 PF00067 Cytochrome P450 ACU13_20640 PF00067 Cytochrome P450 ACU13_20645 PF00067 Cytochrome P450 ACU13_20660 PF00067 Cytochrome P450 ACU13_20665 PF00348 Polyprenyl synthetase ACU13_20680 PF01070 FMN-dependent dehydrogenase ACU13_20710 PF00849 RNA pseudouridylate synthase ACU13_20735 PF00990 Diguanylate cyclase, GGDEF domain ACU13_20745 PF02595 Glycerate kinase family ACU13_20750 PF07690 Major Facilitator Superfamily ACU13_20765 PF10672 S-adenosylmethionine-dependent methyltransferase ACU13_20765 PF17785 PUA-like domain ACU13_20770 PF03741 Integral membrane protein TerC family ACU13_20775 PF01694 Rhomboid family ACU13_20780 PF03009 Glycerophosphoryl diester phosphodiesterase family ACU13_20790 PF01569 PAP2 superfamily ACU13_20795 PF01926 50S ribosome-binding GTPase ACU13_20795 PF12631 MnmE helical domain ACU13_20795 PF10396 GTP-binding protein TrmE N-terminus ACU13_20800 PF01522 Polysaccharide deacetylase ACU13_20805 PF02096 60Kd inner membrane protein ACU13_20805 PF14849 YidC periplasmic domain ACU13_20810 PF00825 Ribonuclease P ACU13_20815 PF00468 Ribosomal protein L34