locus-tag class description XOC_0002 PF11638 DnaA N-terminal domain XOC_0002 PF08299 Bacterial dnaA protein helix-turn-helix XOC_0002 PF00308 Bacterial dnaA protein XOC_0003 PF02768 DNA polymerase III beta subunit, C-terminal domain XOC_0003 PF02767 DNA polymerase III beta subunit, central domain XOC_0003 PF00712 DNA polymerase III beta subunit, N-terminal domain XOC_0005 PF02463 RecF/RecN/SMC N terminal domain XOC_0006 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XOC_0006 PF00204 DNA gyrase B XOC_0006 PF00986 DNA gyrase B subunit, carboxyl terminus XOC_0006 PF18053 DNA gyrase B subunit insert domain XOC_0006 PF01751 Toprim domain XOC_0008 PF01435 Peptidase family M48 XOC_0010 PF03544 Gram-negative bacterial TonB protein C-terminal XOC_0011 PF01618 MotA/TolQ/ExbB proton channel family XOC_0012 PF02472 Biopolymer transport protein ExbD/TolR XOC_0013 PF02472 Biopolymer transport protein ExbD/TolR XOC_0014 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ XOC_0016 PF13396 Phospholipase_D-nuclease N-terminal XOC_0016 PF13091 PLD-like domain XOC_0022 PF04717 Type VI secretion system, phage-baseplate injector XOC_0022 PF16671 Actin cross-linking domain XOC_0027 PF13614 AAA domain XOC_0032 PF05598 Transposase domain (DUF772) XOC_0040 PF00664 ABC transporter transmembrane region XOC_0040 PF00005 ABC transporter XOC_0040 PF03412 Peptidase C39 family XOC_0048 PF08240 Alcohol dehydrogenase GroES-like domain XOC_0048 PF00107 Zinc-binding dehydrogenase XOC_0050 PF00150 Cellulase (glycosyl hydrolase family 5) XOC_0051 PF00150 Cellulase (glycosyl hydrolase family 5) XOC_0053 PF00150 Cellulase (glycosyl hydrolase family 5) XOC_0056 PF04389 Peptidase family M28 XOC_0058 PF01551 Peptidase family M23 XOC_0059 PF03572 Peptidase family S41 XOC_0059 PF13180 PDZ domain XOC_0060 PF01842 ACT domain XOC_0060 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain XOC_0060 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain XOC_0063 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) XOC_0065 PF04055 Radical SAM superfamily XOC_0070 PF06827 Zinc finger found in FPG and IleRS XOC_0070 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain XOC_0070 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain XOC_0073 PF05598 Transposase domain (DUF772) XOC_0073 PF01609 Transposase DDE domain XOC_0075 PF01609 Transposase DDE domain XOC_0075 PF05598 Transposase domain (DUF772) XOC_0076 PF01070 FMN-dependent dehydrogenase XOC_0079 PF00348 Polyprenyl synthetase XOC_0080 PF00067 Cytochrome P450 XOC_0083 PF00067 Cytochrome P450 XOC_0084 PF00067 Cytochrome P450 XOC_0085 PF00067 Cytochrome P450 XOC_0101 PF01381 Helix-turn-helix XOC_0102 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB XOC_0103 PF13538 UvrD-like helicase C-terminal domain XOC_0105 PF12705 PD-(D/E)XK nuclease superfamily XOC_0105 PF00580 UvrD/REP helicase N-terminal domain XOC_0105 PF13361 UvrD-like helicase C-terminal domain XOC_0106 PF17946 RecC C-terminal domain XOC_0113 PF00005 ABC transporter XOC_0114 PF02405 Permease MlaE XOC_0115 PF02470 MlaD protein XOC_0116 PF05494 MlaC protein XOC_0118 PF04333 MlaA lipoprotein XOC_0120 PF00255 Glutathione peroxidase XOC_0122 PF02646 RmuC family XOC_0125 PF13520 Amino acid permease XOC_0131 PF00665 Integrase core domain XOC_0131 PF13936 Helix-turn-helix domain XOC_0134 PF07992 Pyridine nucleotide-disulphide oxidoreductase XOC_0134 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster XOC_0135 PF01493 GXGXG motif XOC_0135 PF04898 Glutamate synthase central domain XOC_0135 PF00310 Glutamine amidotransferases class-II XOC_0135 PF01645 Conserved region in glutamate synthase XOC_0149 PF00270 DEAD/DEAH box helicase XOC_0149 PF09369 Domain of unknown function (DUF1998) XOC_0149 PF00271 Helicase conserved C-terminal domain XOC_0150 PF03006 Haemolysin-III related XOC_0154 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain XOC_0156 PF00155 Aminotransferase class I and II XOC_0157 PF00593 TonB dependent receptor XOC_0157 PF07715 TonB-dependent Receptor Plug Domain XOC_0160 PF01070 FMN-dependent dehydrogenase XOC_0161 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family XOC_0163 PF00486 Transcriptional regulatory protein, C terminal XOC_0167 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase XOC_0167 PF12241 Trans-2-enoyl-CoA reductase catalytic region XOC_0167 PF07055 Enoyl reductase FAD binding domain XOC_0170 PF00294 pfkB family carbohydrate kinase XOC_0179 PF08946 Osmosensory transporter coiled coil XOC_0179 PF00083 Sugar (and other) transporter XOC_0186 PF00293 NUDIX domain XOC_0186 PF13344 Haloacid dehalogenase-like hydrolase XOC_0189 PF16485 Protealysin propeptide XOC_0189 PF02868 Thermolysin metallopeptidase, alpha-helical domain XOC_0189 PF01447 Thermolysin metallopeptidase, catalytic domain XOC_0195 PF05532 CsbD-like XOC_0201 PF01609 Transposase DDE domain XOC_0201 PF05598 Transposase domain (DUF772) XOC_0208 PF00083 Sugar (and other) transporter XOC_0214 PF01227 GTP cyclohydrolase I XOC_0221 PF01925 Sulfite exporter TauE/SafE XOC_0222 PF02810 SEC-C motif XOC_0225 PF01263 Aldose 1-epimerase XOC_0226 PF07690 Major Facilitator Superfamily XOC_0227 PF01126 Heme oxygenase XOC_0228 PF13426 PAS domain XOC_0228 PF01590 GAF domain XOC_0228 PF00360 Phytochrome region XOC_0228 PF08446 PAS fold XOC_0229 PF03594 Benzoate membrane transport protein XOC_0237 PF05598 Transposase domain (DUF772) XOC_0239 PF05598 Transposase domain (DUF772) XOC_0242 PF05598 Transposase domain (DUF772) XOC_0242 PF01609 Transposase DDE domain XOC_0245 PF05598 Transposase domain (DUF772) XOC_0249 PF00128 Alpha amylase, catalytic domain XOC_0249 PF11896 Domain of unknown function (DUF3416) XOC_0250 PF16657 Maltogenic Amylase, C-terminal domain XOC_0250 PF00128 Alpha amylase, catalytic domain XOC_0251 PF02806 Alpha amylase, C-terminal all-beta domain XOC_0251 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) XOC_0251 PF00128 Alpha amylase, catalytic domain XOC_0255 PF00356 Bacterial regulatory proteins, lacI family XOC_0256 PF04962 KduI/IolB family XOC_0257 PF04962 KduI/IolB family XOC_0260 PF00351 Biopterin-dependent aromatic amino acid hydroxylase XOC_0261 PF01037 Lrp/AsnC ligand binding domain XOC_0262 PF07715 TonB-dependent Receptor Plug Domain XOC_0262 PF00593 TonB dependent receptor XOC_0263 PF01734 Patatin-like phospholipase XOC_0264 PF01546 Peptidase family M20/M25/M40 XOC_0264 PF07687 Peptidase dimerisation domain XOC_0266 PF00005 ABC transporter XOC_0269 PF00571 CBS domain XOC_0269 PF00005 ABC transporter XOC_0270 PF00528 Binding-protein-dependent transport system inner membrane component XOC_0272 PF03781 Sulfatase-modifying factor enzyme 1 XOC_0272 PF12867 DinB superfamily XOC_0273 PF10017 Histidine-specific methyltransferase, SAM-dependent XOC_0274 PF07804 HipA-like C-terminal domain XOC_0274 PF13657 HipA N-terminal domain XOC_0275 PF01381 Helix-turn-helix XOC_0279 PF10609 NUBPL iron-transfer P-loop NTPase XOC_0279 PF01883 Iron-sulfur cluster assembly protein XOC_0282 PF13091 PLD-like domain XOC_0283 PF03061 Thioesterase superfamily XOC_0292 PF02673 Bacitracin resistance protein BacA XOC_0293 PF00120 Glutamine synthetase, catalytic domain XOC_0293 PF03951 Glutamine synthetase, beta-Grasp domain XOC_0294 PF00543 Nitrogen regulatory protein P-II XOC_0295 PF00909 Ammonium Transporter Family XOC_0296 PF00989 PAS fold XOC_0296 PF00512 His Kinase A (phospho-acceptor) domain XOC_0296 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XOC_0297 PF00072 Response regulator receiver domain XOC_0297 PF02954 Bacterial regulatory protein, Fis family XOC_0297 PF00158 Sigma-54 interaction domain XOC_0298 PF00080 Copper/zinc superoxide dismutase (SODC) XOC_0299 PF00080 Copper/zinc superoxide dismutase (SODC) XOC_0301 PF01609 Transposase DDE domain XOC_0301 PF05598 Transposase domain (DUF772) XOC_0306 PF00108 Thiolase, N-terminal domain XOC_0306 PF02803 Thiolase, C-terminal domain XOC_0316 PF00581 Rhodanese-like domain XOC_0317 PF02556 Preprotein translocase subunit SecB XOC_0318 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus XOC_0318 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus XOC_0320 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain XOC_0320 PF00205 Thiamine pyrophosphate enzyme, central domain XOC_0320 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain XOC_0321 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XOC_0322 PF00158 Sigma-54 interaction domain XOC_0322 PF00072 Response regulator receiver domain XOC_0322 PF02954 Bacterial regulatory protein, Fis family XOC_0325 PF07690 Major Facilitator Superfamily XOC_0326 PF00588 SpoU rRNA Methylase family XOC_0329 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III XOC_0329 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal XOC_0330 PF13784 Fic/DOC family N-terminal XOC_0330 PF02661 Fic/DOC family XOC_0331 PF00561 alpha/beta hydrolase fold XOC_0332 PF03692 Putative zinc- or iron-chelating domain XOC_0333 PF00501 AMP-binding enzyme XOC_0334 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family XOC_0337 PF07478 D-ala D-ala ligase C-terminus XOC_0337 PF01820 D-ala D-ala ligase N-terminus XOC_0340 PF03109 ABC1 family XOC_0344 PF00849 RNA pseudouridylate synthase XOC_0346 PF00472 RF-1 domain XOC_0349 PF01432 Peptidase family M3 XOC_0353 PF13570 PQQ-like domain XOC_0353 PF13360 PQQ-like domain XOC_0353 PF01011 PQQ enzyme repeat XOC_0356 PF06165 Glycosyltransferase family 36 XOC_0356 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain XOC_0359 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XOC_0359 PF00512 His Kinase A (phospho-acceptor) domain XOC_0360 PF02659 Putative manganese efflux pump XOC_0361 PF01614 Bacterial transcriptional regulator XOC_0361 PF09339 IclR helix-turn-helix domain XOC_0362 PF07690 Major Facilitator Superfamily XOC_0365 PF00196 Bacterial regulatory proteins, luxR family XOC_0365 PF00072 Response regulator receiver domain XOC_0366 PF16177 Acetyl-coenzyme A synthetase N-terminus XOC_0366 PF00501 AMP-binding enzyme XOC_0366 PF13193 AMP-binding enzyme C-terminal domain XOC_0368 PF04341 Protein of unknown function, DUF485 XOC_0369 PF00474 Sodium:solute symporter family XOC_0371 PF03372 Endonuclease/Exonuclease/phosphatase family XOC_0373 PF04226 Transglycosylase associated protein XOC_0374 PF01648 4'-phosphopantetheinyl transferase superfamily XOC_0375 PF16655 PhoD-like phosphatase, N-terminal domain XOC_0375 PF09423 PhoD-like phosphatase XOC_0376 PF16655 PhoD-like phosphatase, N-terminal domain XOC_0376 PF09423 PhoD-like phosphatase XOC_0377 PF02527 rRNA small subunit methyltransferase G XOC_0381 PF00830 Ribosomal L28 family XOC_0382 PF00471 Ribosomal protein L33 XOC_0383 PF04909 Amidohydrolase XOC_0385 PF04303 PrpF protein XOC_0386 PF03737 Aldolase/RraA XOC_0387 PF03466 LysR substrate binding domain XOC_0387 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XOC_0388 PF13091 PLD-like domain XOC_0388 PF13396 Phospholipase_D-nuclease N-terminal XOC_0391 PF00580 UvrD/REP helicase N-terminal domain XOC_0391 PF13361 UvrD-like helicase C-terminal domain XOC_0393 PF12464 Maltose acetyltransferase XOC_0393 PF14602 Hexapeptide repeat of succinyl-transferase XOC_0405 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain XOC_0405 PF01367 5'-3' exonuclease, C-terminal SAM fold XOC_0405 PF01612 3'-5' exonuclease XOC_0405 PF00476 DNA polymerase family A XOC_0419 PF07977 FabA-like domain XOC_0420 PF01553 Acyltransferase XOC_0422 PF00550 Phosphopantetheine attachment site XOC_0423 PF04820 Tryptophan halogenase XOC_0432 PF01218 Coproporphyrinogen III oxidase XOC_0435 PF00535 Glycosyl transferase family 2 XOC_0437 PF02801 Beta-ketoacyl synthase, C-terminal domain XOC_0437 PF00109 Beta-ketoacyl synthase, N-terminal domain XOC_0438 PF05166 YcgL domain XOC_0441 PF00723 Glycosyl hydrolases family 15 XOC_0442 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain XOC_0442 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain XOC_0443 PF01609 Transposase DDE domain XOC_0443 PF05598 Transposase domain (DUF772) XOC_0446 PF00999 Sodium/hydrogen exchanger family XOC_0446 PF02254 TrkA-N domain XOC_0448 PF03448 MgtE intracellular N domain XOC_0448 PF01769 Divalent cation transporter XOC_0448 PF00571 CBS domain XOC_0450 PF00583 Acetyltransferase (GNAT) family XOC_0450 PF13380 CoA binding domain XOC_0450 PF13607 Succinyl-CoA ligase like flavodoxin domain XOC_0454 PF00317 Ribonucleotide reductase, all-alpha domain XOC_0454 PF02867 Ribonucleotide reductase, barrel domain XOC_0454 PF03477 ATP cone domain XOC_0455 PF00268 Ribonucleotide reductase, small chain XOC_0458 PF13276 HTH-like domain XOC_0458 PF13683 Integrase core domain XOC_0459 PF01527 Transposase XOC_0460 PF03377 TAL effector repeat XOC_0463 PF03377 TAL effector repeat XOC_0470 PF05598 Transposase domain (DUF772) XOC_0473 PF03377 TAL effector repeat XOC_0479 PF00106 short chain dehydrogenase XOC_0483 PF06903 VirK protein XOC_0485 PF00271 Helicase conserved C-terminal domain XOC_0485 PF00270 DEAD/DEAH box helicase XOC_0487 PF05598 Transposase domain (DUF772) XOC_0487 PF01609 Transposase DDE domain XOC_0489 PF02817 e3 binding domain XOC_0489 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) XOC_0489 PF00364 Biotin-requiring enzyme XOC_0491 PF02779 Transketolase, pyrimidine binding domain XOC_0491 PF02780 Transketolase, C-terminal domain XOC_0492 PF00676 Dehydrogenase E1 component XOC_0494 PF03301 Tryptophan 2,3-dioxygenase XOC_0495 PF00854 POT family XOC_0498 PF01047 MarR family XOC_0499 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XOC_0504 PF04209 homogentisate 1,2-dioxygenase XOC_0506 PF03334 Na+/H+ antiporter subunit XOC_0507 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) XOC_0509 PF00361 Proton-conducting membrane transporter XOC_0510 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L XOC_0511 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus XOC_0511 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter XOC_0511 PF00361 Proton-conducting membrane transporter XOC_0511 PF13244 Domain of unknown function (DUF4040) XOC_0514 PF07504 Fungalysin/Thermolysin Propeptide Motif XOC_0514 PF01447 Thermolysin metallopeptidase, catalytic domain XOC_0514 PF02868 Thermolysin metallopeptidase, alpha-helical domain XOC_0514 PF01483 Proprotein convertase P-domain XOC_0518 PF03372 Endonuclease/Exonuclease/phosphatase family XOC_0519 PF07690 Major Facilitator Superfamily XOC_0521 PF03702 Anhydro-N-acetylmuramic acid kinase XOC_0523 PF01551 Peptidase family M23 XOC_0523 PF04225 Opacity-associated protein A LysM-like domain XOC_0524 PF00579 tRNA synthetases class I (W and Y) XOC_0527 PF01527 Transposase XOC_0529 PF13276 HTH-like domain XOC_0529 PF13683 Integrase core domain XOC_0531 PF00171 Aldehyde dehydrogenase family XOC_0531 PF14850 DNA-binding domain of Proline dehydrogenase XOC_0531 PF01619 Proline dehydrogenase XOC_0531 PF18327 Proline utilization A proline dehydrogenase N-terminal domain XOC_0533 PF02790 Cytochrome C oxidase subunit II, transmembrane domain XOC_0533 PF00116 Cytochrome C oxidase subunit II, periplasmic domain XOC_0534 PF00115 Cytochrome C and Quinol oxidase polypeptide I XOC_0536 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 XOC_0537 PF00510 Cytochrome c oxidase subunit III XOC_0542 PF01040 UbiA prenyltransferase family XOC_0544 PF13593 SBF-like CPA transporter family (DUF4137) XOC_0546 PF08275 DNA primase catalytic core, N-terminal domain XOC_0546 PF08278 DNA primase DnaG DnaB-binding XOC_0546 PF10410 DnaB-helicase binding domain of primase XOC_0546 PF01807 CHC2 zinc finger XOC_0547 PF03631 Virulence factor BrkB XOC_0548 PF09424 Yqey-like protein XOC_0549 PF01165 Ribosomal protein S21 XOC_0550 PF00814 Glycoprotease family XOC_0551 PF02152 Dihydroneopterin aldolase XOC_0552 PF00933 Glycosyl hydrolase family 3 N terminal domain XOC_0552 PF01915 Glycosyl hydrolase family 3 C-terminal domain XOC_0552 PF14310 Fibronectin type III-like domain XOC_0558 PF07995 Glucose / Sorbosone dehydrogenase XOC_0559 PF05360 yiaA/B two helix domain XOC_0562 PF13520 Amino acid permease XOC_0564 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain XOC_0564 PF13378 Enolase C-terminal domain-like XOC_0566 PF01510 N-acetylmuramoyl-L-alanine amidase XOC_0567 PF01427 D-ala-D-ala dipeptidase XOC_0578 PF07063 Domain of unknown function (DUF1338) XOC_0583 PF00873 AcrB/AcrD/AcrF family XOC_0584 PF00873 AcrB/AcrD/AcrF family XOC_0585 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XOC_0587 PF07687 Peptidase dimerisation domain XOC_0587 PF01546 Peptidase family M20/M25/M40 XOC_0589 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term XOC_0589 PF14489 QueF-like protein XOC_0592 PF03971 Monomeric isocitrate dehydrogenase XOC_0595 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) XOC_0596 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) XOC_0597 PF07497 Rho termination factor, RNA-binding domain XOC_0597 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XOC_0597 PF07498 Rho termination factor, N-terminal domain XOC_0599 PF00085 Thioredoxin XOC_0600 PF12300 ATP-dependent RNA helicase RhlB XOC_0600 PF00270 DEAD/DEAH box helicase XOC_0600 PF00271 Helicase conserved C-terminal domain XOC_0601 PF00005 ABC transporter XOC_0602 PF18075 FtsX extracellular domain XOC_0603 PF00072 Response regulator receiver domain XOC_0603 PF01339 CheB methylesterase XOC_0604 PF03167 Uracil DNA glycosylase superfamily XOC_0605 PF04542 Sigma-70 region 2 XOC_0605 PF04545 Sigma-70, region 4 XOC_0606 PF03458 UPF0126 domain XOC_0607 PF07992 Pyridine nucleotide-disulphide oxidoreductase XOC_0615 PF00166 Chaperonin 10 Kd subunit XOC_0616 PF00118 TCP-1/cpn60 chaperonin family XOC_0619 PF00593 TonB dependent receptor XOC_0619 PF07715 TonB-dependent Receptor Plug Domain XOC_0620 PF00793 DAHP synthetase I family XOC_0624 PF08450 SMP-30/Gluconolactonase/LRE-like region XOC_0625 PF01527 Transposase XOC_0626 PF13683 Integrase core domain XOC_0626 PF13276 HTH-like domain XOC_0628 PF00106 short chain dehydrogenase XOC_0639 PF07759 Protein of unknown function (DUF1615) XOC_0641 PF00892 EamA-like transporter family XOC_0642 PF03330 Lytic transglycolase XOC_0644 PF00553 Cellulose binding domain XOC_0644 PF00041 Fibronectin type III domain XOC_0644 PF01341 Glycosyl hydrolases family 6 XOC_0647 PF05598 Transposase domain (DUF772) XOC_0648 PF00324 Amino acid permease XOC_0651 PF01544 CorA-like Mg2+ transporter protein XOC_0659 PF01204 Trehalase XOC_0662 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain XOC_0662 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain XOC_0666 PF00563 EAL domain XOC_0666 PF00990 Diguanylate cyclase, GGDEF domain XOC_0666 PF03707 Bacterial signalling protein N terminal repeat XOC_0668 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XOC_0668 PF00672 HAMP domain XOC_0668 PF02203 Tar ligand binding domain homologue XOC_0671 PF00150 Cellulase (glycosyl hydrolase family 5) XOC_0671 PF00553 Cellulose binding domain XOC_0672 PF00150 Cellulase (glycosyl hydrolase family 5) XOC_0672 PF00553 Cellulose binding domain XOC_0674 PF01740 STAS domain XOC_0674 PF00916 Sulfate permease family XOC_0675 PF17158 Membrane-associated sensor, integral membrane domain XOC_0675 PF00990 Diguanylate cyclase, GGDEF domain XOC_0678 PF13632 Glycosyl transferase family group 2 XOC_0680 PF07694 5TMR of 5TMR-LYT XOC_0680 PF06580 Histidine kinase XOC_0681 PF04397 LytTr DNA-binding domain XOC_0681 PF00072 Response regulator receiver domain XOC_0682 PF03900 Porphobilinogen deaminase, C-terminal domain XOC_0682 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain XOC_0687 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain XOC_0687 PF00326 Prolyl oligopeptidase family XOC_0689 PF00155 Aminotransferase class I and II XOC_0691 PF00326 Prolyl oligopeptidase family XOC_0691 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain XOC_0692 PF04304 Protein of unknown function (DUF454) XOC_0694 PF01678 Diaminopimelate epimerase XOC_0696 PF00589 Phage integrase family XOC_0696 PF02899 Phage integrase, N-terminal SAM-like domain XOC_0697 PF00227 Proteasome subunit XOC_0698 PF10431 C-terminal, D2-small domain, of ClpB protein XOC_0698 PF07724 AAA domain (Cdc48 subfamily) XOC_0698 PF00004 ATPase family associated with various cellular activities (AAA) XOC_0701 PF13673 Acetyltransferase (GNAT) domain XOC_0702 PF13533 Biotin-lipoyl like XOC_0704 PF01209 ubiE/COQ5 methyltransferase family XOC_0705 PF00563 EAL domain XOC_0705 PF00990 Diguanylate cyclase, GGDEF domain XOC_0705 PF03707 Bacterial signalling protein N terminal repeat XOC_0707 PF11838 ERAP1-like C-terminal domain XOC_0707 PF01433 Peptidase family M1 domain XOC_0710 PF00294 pfkB family carbohydrate kinase XOC_0712 PF04085 rod shape-determining protein MreC XOC_0714 PF00905 Penicillin binding protein transpeptidase domain XOC_0714 PF03717 Penicillin-binding Protein dimerisation domain XOC_0715 PF01098 Cell cycle protein XOC_0719 PF13406 Transglycosylase SLT domain XOC_0720 PF03330 Lytic transglycolase XOC_0720 PF05036 Sporulation related domain XOC_0722 PF07943 Penicillin-binding protein 5, C-terminal domain XOC_0722 PF00768 D-alanyl-D-alanine carboxypeptidase XOC_0725 PF04359 Protein of unknown function (DUF493) XOC_0726 PF03099 Biotin/lipoate A/B protein ligase family XOC_0727 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family XOC_0727 PF04055 Radical SAM superfamily XOC_0728 PF11818 C-terminal domain of tail specific protease (DUF3340) XOC_0728 PF00595 PDZ domain XOC_0728 PF03572 Peptidase family S41 XOC_0728 PF17804 Tail specific protease N-terminal domain XOC_0730 PF01467 Cytidylyltransferase-like XOC_0730 PF00293 NUDIX domain XOC_0738 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase XOC_0738 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain XOC_0740 PF01609 Transposase DDE domain XOC_0740 PF05598 Transposase domain (DUF772) XOC_0741 PF01408 Oxidoreductase family, NAD-binding Rossmann fold XOC_0741 PF02894 Oxidoreductase family, C-terminal alpha/beta domain XOC_0742 PF04972 BON domain XOC_0743 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XOC_0743 PF01590 GAF domain XOC_0743 PF00360 Phytochrome region XOC_0743 PF08446 PAS fold XOC_0743 PF00512 His Kinase A (phospho-acceptor) domain XOC_0744 PF00072 Response regulator receiver domain XOC_0745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XOC_0745 PF00512 His Kinase A (phospho-acceptor) domain XOC_0746 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) XOC_0749 PF13333 Integrase core domain XOC_0749 PF00665 Integrase core domain XOC_0749 PF13276 HTH-like domain XOC_0750 PF01527 Transposase XOC_0755 PF16355 Domain of unknown function (DUF4982) XOC_0755 PF02837 Glycosyl hydrolases family 2, sugar binding domain XOC_0755 PF00703 Glycosyl hydrolases family 2 XOC_0755 PF02836 Glycosyl hydrolases family 2, TIM barrel domain XOC_0755 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 XOC_0760 PF07690 Major Facilitator Superfamily XOC_0761 PF00356 Bacterial regulatory proteins, lacI family XOC_0762 PF01380 SIS domain XOC_0763 PF01979 Amidohydrolase family XOC_0765 PF00535 Glycosyl transferase family 2 XOC_0766 PF01522 Polysaccharide deacetylase XOC_0766 PF14883 Hypothetical glycosyl hydrolase family 13 XOC_0768 PF13936 Helix-turn-helix domain XOC_0768 PF00665 Integrase core domain XOC_0769 PF12627 Probable RNA and SrmB- binding site of polymerase A XOC_0769 PF01743 Poly A polymerase head domain XOC_0769 PF01966 HD domain XOC_0770 PF00732 GMC oxidoreductase XOC_0770 PF05199 GMC oxidoreductase XOC_0771 PF00171 Aldehyde dehydrogenase family XOC_0772 PF02028 BCCT, betaine/carnitine/choline family transporter XOC_0773 PF02028 BCCT, betaine/carnitine/choline family transporter XOC_0777 PF00034 Cytochrome c XOC_0778 PF01926 50S ribosome-binding GTPase XOC_0780 PF04107 Glutamate-cysteine ligase family 2(GCS2) XOC_0782 PF05598 Transposase domain (DUF772) XOC_0783 PF00512 His Kinase A (phospho-acceptor) domain XOC_0783 PF00672 HAMP domain XOC_0783 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XOC_0786 PF05598 Transposase domain (DUF772) XOC_0786 PF01609 Transposase DDE domain XOC_0788 PF00512 His Kinase A (phospho-acceptor) domain XOC_0788 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XOC_0788 PF00672 HAMP domain XOC_0788 PF16527 Two-component sensor protein CpxA, periplasmic domain XOC_0789 PF00486 Transcriptional regulatory protein, C terminal XOC_0789 PF00072 Response regulator receiver domain XOC_0793 PF02583 Metal-sensitive transcriptional repressor XOC_0794 PF00107 Zinc-binding dehydrogenase XOC_0794 PF08240 Alcohol dehydrogenase GroES-like domain XOC_0796 PF04828 Glutathione-dependent formaldehyde-activating enzyme XOC_0797 PF00756 Putative esterase XOC_0802 PF00005 ABC transporter XOC_0802 PF12848 ABC transporter XOC_0806 PF00464 Serine hydroxymethyltransferase XOC_0808 PF03477 ATP cone domain XOC_0810 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region XOC_0810 PF01872 RibD C-terminal domain XOC_0811 PF01872 RibD C-terminal domain XOC_0811 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region XOC_0813 PF00677 Lumazine binding domain XOC_0814 PF00925 GTP cyclohydrolase II XOC_0814 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase XOC_0815 PF00885 6,7-dimethyl-8-ribityllumazine synthase XOC_0816 PF01029 NusB family XOC_0818 PF02769 AIR synthase related protein, C-terminal domain XOC_0818 PF00586 AIR synthase related protein, N-terminal domain XOC_0822 PF03814 Potassium-transporting ATPase A subunit XOC_0824 PF02669 K+-transporting ATPase, c chain XOC_0825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XOC_0825 PF02702 Osmosensitive K+ channel His kinase sensor domain XOC_0825 PF00512 His Kinase A (phospho-acceptor) domain XOC_0825 PF13492 GAF domain XOC_0825 PF13493 Domain of unknown function (DUF4118) XOC_0826 PF00072 Response regulator receiver domain XOC_0826 PF00486 Transcriptional regulatory protein, C terminal XOC_0827 PF02913 FAD linked oxidases, C-terminal domain XOC_0827 PF01565 FAD binding domain XOC_0828 PF04307 LexA-binding, inner membrane-associated putative hydrolase XOC_0829 PF02021 Uncharacterised protein family UPF0102 XOC_0831 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases XOC_0834 PF02381 MraZ protein, putative antitoxin-like XOC_0835 PF01795 MraW methylase family XOC_0836 PF04999 Cell division protein FtsL XOC_0838 PF03717 Penicillin-binding Protein dimerisation domain XOC_0838 PF00905 Penicillin binding protein transpeptidase domain XOC_0839 PF01225 Mur ligase family, catalytic domain XOC_0839 PF08245 Mur ligase middle domain XOC_0839 PF02875 Mur ligase family, glutamate ligase domain XOC_0840 PF08245 Mur ligase middle domain XOC_0840 PF02875 Mur ligase family, glutamate ligase domain XOC_0840 PF01225 Mur ligase family, catalytic domain XOC_0841 PF00953 Glycosyl transferase family 4 XOC_0842 PF01098 Cell cycle protein XOC_0843 PF04101 Glycosyltransferase family 28 C-terminal domain XOC_0843 PF03033 Glycosyltransferase family 28 N-terminal domain XOC_0844 PF08245 Mur ligase middle domain XOC_0844 PF01225 Mur ligase family, catalytic domain XOC_0844 PF02875 Mur ligase family, glutamate ligase domain XOC_0845 PF07478 D-ala D-ala ligase C-terminus XOC_0845 PF01820 D-ala D-ala ligase N-terminus XOC_0846 PF08478 POTRA domain, FtsQ-type XOC_0846 PF03799 Cell division protein FtsQ XOC_0847 PF02491 SHS2 domain inserted in FTSA XOC_0849 PF00091 Tubulin/FtsZ family, GTPase domain XOC_0849 PF12327 FtsZ family, C-terminal domain XOC_0850 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase XOC_0851 PF01476 LysM domain XOC_0851 PF01551 Peptidase family M23 XOC_0852 PF07517 SecA DEAD-like domain XOC_0852 PF02810 SEC-C motif XOC_0852 PF07516 SecA Wing and Scaffold domain XOC_0852 PF01043 SecA preprotein cross-linking domain XOC_0855 PF00293 NUDIX domain XOC_0857 PF02219 Methylenetetrahydrofolate reductase XOC_0859 PF00109 Beta-ketoacyl synthase, N-terminal domain XOC_0859 PF00107 Zinc-binding dehydrogenase XOC_0859 PF08240 Alcohol dehydrogenase GroES-like domain XOC_0859 PF00698 Acyl transferase domain XOC_0859 PF02801 Beta-ketoacyl synthase, C-terminal domain XOC_0859 PF16197 Ketoacyl-synthetase C-terminal extension XOC_0859 PF00550 Phosphopantetheine attachment site XOC_0859 PF14765 Polyketide synthase dehydratase XOC_0859 PF08659 KR domain XOC_0860 PF00082 Subtilase family XOC_0860 PF09286 Pro-kumamolisin, activation domain XOC_0862 PF01408 Oxidoreductase family, NAD-binding Rossmann fold XOC_0869 PF13649 Methyltransferase domain XOC_0870 PF05221 S-adenosyl-L-homocysteine hydrolase XOC_0870 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain XOC_0872 PF00311 Phosphoenolpyruvate carboxylase XOC_0877 PF00328 Histidine phosphatase superfamily (branch 2) XOC_0878 PF02772 S-adenosylmethionine synthetase, central domain XOC_0878 PF02773 S-adenosylmethionine synthetase, C-terminal domain XOC_0878 PF00438 S-adenosylmethionine synthetase, N-terminal domain XOC_0881 PF01207 Dihydrouridine synthase (Dus) XOC_0884 PF00294 pfkB family carbohydrate kinase XOC_0885 PF07662 Na+ dependent nucleoside transporter C-terminus XOC_0885 PF07670 Nucleoside recognition XOC_0885 PF01773 Na+ dependent nucleoside transporter N-terminus XOC_0888 PF00248 Aldo/keto reductase family XOC_0893 PF00528 Binding-protein-dependent transport system inner membrane component XOC_0894 PF00005 ABC transporter XOC_0895 PF00005 ABC transporter XOC_0897 PF02668 Taurine catabolism dioxygenase TauD, TfdA family XOC_0899 PF00005 ABC transporter XOC_0900 PF13472 GDSL-like Lipase/Acylhydrolase family XOC_0901 PF00072 Response regulator receiver domain XOC_0901 PF00486 Transcriptional regulatory protein, C terminal XOC_0902 PF08521 Two-component sensor kinase N-terminal XOC_0902 PF00512 His Kinase A (phospho-acceptor) domain XOC_0902 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XOC_0904 PF01219 Prokaryotic diacylglycerol kinase XOC_0908 PF01790 Prolipoprotein diacylglyceryl transferase XOC_0909 PF00303 Thymidylate synthase XOC_0911 PF00186 Dihydrofolate reductase XOC_0912 PF00149 Calcineurin-like phosphoesterase XOC_0913 PF04379 ApaG domain XOC_0914 PF00398 Ribosomal RNA adenine dimethylase XOC_0915 PF04166 Pyridoxal phosphate biosynthetic protein PdxA XOC_0916 PF00639 PPIC-type PPIASE domain XOC_0916 PF09312 SurA N-terminal domain XOC_0918 PF03968 OstA-like protein XOC_0918 PF04453 LPS transport system D XOC_0919 PF00850 Histone deacetylase domain XOC_0920 PF01923 Cobalamin adenosyltransferase XOC_0922 PF01494 FAD binding domain XOC_0923 PF01494 FAD binding domain XOC_0928 PF07729 FCD domain XOC_0928 PF00392 Bacterial regulatory proteins, gntR family XOC_0929 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase XOC_0930 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit XOC_0930 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase XOC_0931 PF03466 LysR substrate binding domain XOC_0931 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XOC_0932 PF00501 AMP-binding enzyme XOC_0932 PF13193 AMP-binding enzyme C-terminal domain XOC_0933 PF00171 Aldehyde dehydrogenase family XOC_0934 PF00378 Enoyl-CoA hydratase/isomerase XOC_0939 PF08450 SMP-30/Gluconolactonase/LRE-like region XOC_0940 PF01408 Oxidoreductase family, NAD-binding Rossmann fold XOC_0940 PF02894 Oxidoreductase family, C-terminal alpha/beta domain XOC_0941 PF01728 FtsJ-like methyltransferase XOC_0941 PF18125 RlmM ferredoxin-like domain XOC_0944 PF00892 EamA-like transporter family XOC_0946 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain XOC_0946 PF00749 tRNA synthetases class I (E and Q), catalytic domain XOC_0950 PF00072 Response regulator receiver domain XOC_0950 PF00990 Diguanylate cyclase, GGDEF domain XOC_0951 PF00072 Response regulator receiver domain XOC_0951 PF00196 Bacterial regulatory proteins, luxR family XOC_0953 PF01625 Peptide methionine sulfoxide reductase XOC_0954 PF00923 Transaldolase/Fructose-6-phosphate aldolase XOC_0957 PF03466 LysR substrate binding domain XOC_0957 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XOC_0958 PF07992 Pyridine nucleotide-disulphide oxidoreductase XOC_0958 PF13192 Thioredoxin domain XOC_0959 PF00578 AhpC/TSA family XOC_0959 PF10417 C-terminal domain of 1-Cys peroxiredoxin XOC_0960 PF05175 Methyltransferase small domain XOC_0960 PF17827 PrmC N-terminal domain XOC_0963 PF00561 alpha/beta hydrolase fold XOC_0965 PF00293 NUDIX domain XOC_0966 PF01612 3'-5' exonuclease XOC_0966 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain XOC_0966 PF01367 5'-3' exonuclease, C-terminal SAM fold XOC_0966 PF00476 DNA polymerase family A XOC_0971 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch XOC_0971 PF01262 Alanine dehydrogenase/PNT, C-terminal domain XOC_0971 PF05222 Alanine dehydrogenase/PNT, N-terminal domain XOC_0977 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch XOC_0978 PF02233 NAD(P) transhydrogenase beta subunit XOC_0982 PF01063 Amino-transferase class IV XOC_0983 PF00082 Subtilase family XOC_0983 PF04151 Bacterial pre-peptidase C-terminal domain XOC_0984 PF04073 Aminoacyl-tRNA editing domain XOC_0987 PF17189 Glycosyl hydrolase family 30 beta sandwich domain XOC_0987 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain XOC_0989 PF03358 NADPH-dependent FMN reductase XOC_0990 PF03631 Virulence factor BrkB XOC_0991 PF08534 Redoxin XOC_0992 PF00708 Acylphosphatase XOC_0993 PF03976 Polyphosphate kinase 2 (PPK2) XOC_0995 PF00994 Probable molybdopterin binding domain XOC_0997 PF00472 RF-1 domain XOC_0997 PF03462 PCRF domain XOC_0998 PF01488 Shikimate / quinate 5-dehydrogenase XOC_0998 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain XOC_0998 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain XOC_1001 PF03550 Outer membrane lipoprotein LolB XOC_1002 PF08544 GHMP kinases C terminal XOC_1002 PF00288 GHMP kinases N terminal domain XOC_1005 PF14572 Phosphoribosyl synthetase-associated domain XOC_1005 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase XOC_1006 PF01386 Ribosomal L25p family XOC_1006 PF14693 Ribosomal protein TL5, C-terminal domain XOC_1007 PF01195 Peptidyl-tRNA hydrolase XOC_1008 PF01926 50S ribosome-binding GTPase XOC_1008 PF06071 Protein of unknown function (DUF933) XOC_1012 PF00009 Elongation factor Tu GTP binding domain XOC_1012 PF03144 Elongation factor Tu domain 2 XOC_1012 PF03143 Elongation factor Tu C-terminal domain XOC_1014 PF00584 SecE/Sec61-gamma subunits of protein translocation complex XOC_1015 PF00467 KOW motif XOC_1015 PF02357 Transcription termination factor nusG XOC_1017 PF03946 Ribosomal protein L11, N-terminal domain XOC_1017 PF00298 Ribosomal protein L11, RNA binding domain XOC_1018 PF00687 Ribosomal protein L1p/L10e family XOC_1019 PF00466 Ribosomal protein L10 XOC_1020 PF16320 Ribosomal protein L7/L12 dimerisation domain XOC_1020 PF00542 Ribosomal protein L7/L12 C-terminal domain XOC_1021 PF04563 RNA polymerase beta subunit XOC_1021 PF04561 RNA polymerase Rpb2, domain 2 XOC_1021 PF04565 RNA polymerase Rpb2, domain 3 XOC_1021 PF10385 RNA polymerase beta subunit external 1 domain XOC_1021 PF00562 RNA polymerase Rpb2, domain 6 XOC_1021 PF04560 RNA polymerase Rpb2, domain 7 XOC_1022 PF00623 RNA polymerase Rpb1, domain 2 XOC_1022 PF04997 RNA polymerase Rpb1, domain 1 XOC_1022 PF04998 RNA polymerase Rpb1, domain 5 XOC_1022 PF05000 RNA polymerase Rpb1, domain 4 XOC_1022 PF04983 RNA polymerase Rpb1, domain 3 XOC_1023 PF00164 Ribosomal protein S12/S23 XOC_1025 PF00177 Ribosomal protein S7p/S5e XOC_1026 PF00679 Elongation factor G C-terminus XOC_1026 PF14492 Elongation Factor G, domain II XOC_1026 PF03764 Elongation factor G, domain IV XOC_1026 PF00009 Elongation factor Tu GTP binding domain XOC_1026 PF03144 Elongation factor Tu domain 2 XOC_1027 PF03143 Elongation factor Tu C-terminal domain XOC_1027 PF00009 Elongation factor Tu GTP binding domain XOC_1027 PF03144 Elongation factor Tu domain 2 XOC_1028 PF13333 Integrase core domain XOC_1028 PF00665 Integrase core domain XOC_1028 PF13276 HTH-like domain XOC_1029 PF00338 Ribosomal protein S10p/S20e XOC_1030 PF00297 Ribosomal protein L3 XOC_1031 PF00573 Ribosomal protein L4/L1 family XOC_1032 PF00276 Ribosomal protein L23 XOC_1033 PF03947 Ribosomal Proteins L2, C-terminal domain XOC_1033 PF00181 Ribosomal Proteins L2, RNA binding domain XOC_1034 PF00203 Ribosomal protein S19 XOC_1035 PF00237 Ribosomal protein L22p/L17e XOC_1036 PF00189 Ribosomal protein S3, C-terminal domain XOC_1036 PF07650 KH domain XOC_1037 PF00252 Ribosomal protein L16p/L10e XOC_1038 PF00831 Ribosomal L29 protein XOC_1039 PF00366 Ribosomal protein S17 XOC_1040 PF00238 Ribosomal protein L14p/L23e XOC_1041 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 XOC_1041 PF00467 KOW motif XOC_1042 PF00281 Ribosomal protein L5 XOC_1042 PF00673 ribosomal L5P family C-terminus XOC_1043 PF00253 Ribosomal protein S14p/S29e XOC_1045 PF00410 Ribosomal protein S8 XOC_1046 PF00347 Ribosomal protein L6 XOC_1047 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast XOC_1048 PF03719 Ribosomal protein S5, C-terminal domain XOC_1048 PF00333 Ribosomal protein S5, N-terminal domain XOC_1049 PF00327 Ribosomal protein L30p/L7e XOC_1050 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A XOC_1051 PF00344 SecY translocase XOC_1052 PF00416 Ribosomal protein S13/S18 XOC_1053 PF00411 Ribosomal protein S11 XOC_1054 PF01479 S4 domain XOC_1054 PF00163 Ribosomal protein S4/S9 N-terminal domain XOC_1055 PF01000 RNA polymerase Rpb3/RpoA insert domain XOC_1055 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain XOC_1055 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain XOC_1056 PF01196 Ribosomal protein L17 XOC_1057 PF02600 Disulfide bond formation protein DsbB XOC_1062 PF01474 Class-II DAHP synthetase family XOC_1064 PF01425 Amidase XOC_1068 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD XOC_1069 PF00056 lactate/malate dehydrogenase, NAD binding domain XOC_1069 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain XOC_1070 PF00665 Integrase core domain XOC_1070 PF13333 Integrase core domain XOC_1070 PF13276 HTH-like domain XOC_1071 PF01527 Transposase XOC_1075 PF01609 Transposase DDE domain XOC_1075 PF05598 Transposase domain (DUF772) XOC_1077 PF03009 Glycerophosphoryl diester phosphodiesterase family XOC_1082 PF00480 ROK family XOC_1083 PF07992 Pyridine nucleotide-disulphide oxidoreductase XOC_1083 PF00724 NADH:flavin oxidoreductase / NADH oxidase family XOC_1084 PF08240 Alcohol dehydrogenase GroES-like domain XOC_1084 PF00107 Zinc-binding dehydrogenase XOC_1085 PF05736 OprF membrane domain XOC_1085 PF00691 OmpA family XOC_1088 PF00849 RNA pseudouridylate synthase XOC_1089 PF00155 Aminotransferase class I and II XOC_1091 PF00528 Binding-protein-dependent transport system inner membrane component XOC_1092 PF00528 Binding-protein-dependent transport system inner membrane component XOC_1093 PF12857 TOBE-like domain XOC_1093 PF00005 ABC transporter XOC_1093 PF17850 CysA C-terminal regulatory domain XOC_1095 PF08240 Alcohol dehydrogenase GroES-like domain XOC_1095 PF00107 Zinc-binding dehydrogenase XOC_1097 PF05506 Domain of unknown function (DUF756) XOC_1097 PF04185 Phosphoesterase family XOC_1099 PF10459 Peptidase S46 XOC_1100 PF00300 Histidine phosphatase superfamily (branch 1) XOC_1102 PF08245 Mur ligase middle domain XOC_1102 PF02875 Mur ligase family, glutamate ligase domain XOC_1105 PF00156 Phosphoribosyl transferase domain XOC_1106 PF04305 Protein of unknown function (DUF455) XOC_1110 PF00149 Calcineurin-like phosphoesterase XOC_1111 PF01569 PAP2 superfamily XOC_1112 PF13439 Glycosyltransferase Family 4 XOC_1112 PF00534 Glycosyl transferases group 1 XOC_1113 PF02541 Ppx/GppA phosphatase family XOC_1114 PF13089 Polyphosphate kinase N-terminal domain XOC_1114 PF02503 Polyphosphate kinase middle domain XOC_1114 PF13090 Polyphosphate kinase C-terminal domain 2 XOC_1114 PF17941 Polyphosphate kinase C-terminal domain 1 XOC_1116 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XOC_1116 PF00512 His Kinase A (phospho-acceptor) domain XOC_1116 PF00989 PAS fold XOC_1116 PF11808 Phosphate regulon sensor protein PhoR XOC_1117 PF00072 Response regulator receiver domain XOC_1117 PF00486 Transcriptional regulatory protein, C terminal XOC_1118 PF13181 Tetratricopeptide repeat XOC_1118 PF01435 Peptidase family M48 XOC_1119 PF00462 Glutaredoxin XOC_1121 PF18324 Hypothetical protein TT1725 XOC_1121 PF00180 Isocitrate/isopropylmalate dehydrogenase XOC_1127 PF13683 Integrase core domain XOC_1127 PF13276 HTH-like domain XOC_1128 PF01527 Transposase XOC_1132 PF05697 Bacterial trigger factor protein (TF) XOC_1132 PF05698 Bacterial trigger factor protein (TF) C-terminus XOC_1133 PF00574 Clp protease XOC_1134 PF06689 ClpX C4-type zinc finger XOC_1134 PF10431 C-terminal, D2-small domain, of ClpB protein XOC_1134 PF07724 AAA domain (Cdc48 subfamily) XOC_1135 PF02190 ATP-dependent protease La (LON) substrate-binding domain XOC_1135 PF05362 Lon protease (S16) C-terminal proteolytic domain XOC_1135 PF00004 ATPase family associated with various cellular activities (AAA) XOC_1136 PF00216 Bacterial DNA-binding protein XOC_1141 PF05257 CHAP domain XOC_1141 PF01476 LysM domain XOC_1142 PF16123 Hydroxyacylglutathione hydrolase C-terminus XOC_1142 PF00753 Metallo-beta-lactamase superfamily XOC_1144 PF00075 RNase H XOC_1145 PF00929 Exonuclease XOC_1149 PF01075 Glycosyltransferase family 9 (heptosyltransferase) XOC_1151 PF12706 Beta-lactamase superfamily domain XOC_1151 PF00753 Metallo-beta-lactamase superfamily XOC_1152 PF06463 Molybdenum Cofactor Synthesis C XOC_1152 PF04055 Radical SAM superfamily XOC_1154 PF01967 MoaC family XOC_1155 PF02597 ThiS family XOC_1156 PF02391 MoaE protein XOC_1159 PF12169 DNA polymerase III subunits gamma and tau domain III XOC_1159 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding XOC_1159 PF12170 DNA polymerase III tau subunit V interacting with alpha XOC_1160 PF02575 YbaB/EbfC DNA-binding family XOC_1161 PF02132 RecR protein XOC_1161 PF13662 Toprim domain XOC_1162 PF01230 HIT domain XOC_1164 PF01841 Transglutaminase-like superfamily XOC_1164 PF13559 Domain of unknown function (DUF4129) XOC_1164 PF11992 Domain of unknown function (DUF3488) XOC_1166 PF17863 AAA lid domain XOC_1166 PF07726 ATPase family associated with various cellular activities (AAA) XOC_1169 PF02545 Maf-like protein XOC_1170 PF02620 Large ribosomal RNA subunit accumulation protein YceD XOC_1171 PF01783 Ribosomal L32p protein family XOC_1172 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal XOC_1172 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III XOC_1174 PF00698 Acyl transferase domain XOC_1176 PF00550 Phosphopantetheine attachment site XOC_1177 PF00109 Beta-ketoacyl synthase, N-terminal domain XOC_1177 PF02801 Beta-ketoacyl synthase, C-terminal domain XOC_1178 PF04715 Anthranilate synthase component I, N terminal region XOC_1178 PF00425 chorismate binding enzyme XOC_1179 PF02618 YceG-like family XOC_1180 PF09115 DNA polymerase III, delta subunit, C terminal XOC_1185 PF06506 Propionate catabolism activator XOC_1185 PF00158 Sigma-54 interaction domain XOC_1185 PF02954 Bacterial regulatory protein, Fis family XOC_1187 PF00285 Citrate synthase, C-terminal domain XOC_1188 PF00330 Aconitase family (aconitate hydratase) XOC_1188 PF00694 Aconitase C-terminal domain XOC_1193 PF04303 PrpF protein XOC_1195 PF00593 TonB dependent receptor XOC_1195 PF07715 TonB-dependent Receptor Plug Domain XOC_1204 PF08534 Redoxin XOC_1207 PF01556 DnaJ C terminal domain XOC_1207 PF00226 DnaJ domain XOC_1208 PF00072 Response regulator receiver domain XOC_1210 PF12221 Bacterial membrane protein N terminal XOC_1210 PF01145 SPFH domain / Band 7 family XOC_1211 PF01145 SPFH domain / Band 7 family XOC_1213 PF00709 Adenylosuccinate synthetase XOC_1215 PF01433 Peptidase family M1 domain XOC_1215 PF11838 ERAP1-like C-terminal domain XOC_1216 PF00440 Bacterial regulatory proteins, tetR family XOC_1222 PF01420 Type I restriction modification DNA specificity domain XOC_1223 PF02384 N-6 DNA Methylase XOC_1225 PF04851 Type III restriction enzyme, res subunit XOC_1225 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) XOC_1225 PF08463 EcoEI R protein C-terminal XOC_1225 PF00271 Helicase conserved C-terminal domain XOC_1229 PF04851 Type III restriction enzyme, res subunit XOC_1229 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) XOC_1229 PF00271 Helicase conserved C-terminal domain XOC_1229 PF08463 EcoEI R protein C-terminal XOC_1232 PF12161 HsdM N-terminal domain XOC_1232 PF02384 N-6 DNA Methylase XOC_1233 PF01420 Type I restriction modification DNA specificity domain XOC_1243 PF00300 Histidine phosphatase superfamily (branch 1) XOC_1243 PF13456 Reverse transcriptase-like XOC_1244 PF01256 Carbohydrate kinase XOC_1247 PF00717 Peptidase S24-like XOC_1247 PF01726 LexA DNA binding domain XOC_1251 PF17657 Bacterial DNA polymerase III alpha subunit finger domain XOC_1251 PF07733 Bacterial DNA polymerase III alpha NTPase domain XOC_1251 PF14579 Helix-hairpin-helix motif XOC_1251 PF02811 PHP domain XOC_1254 PF03169 OPT oligopeptide transporter protein XOC_1257 PF05598 Transposase domain (DUF772) XOC_1258 PF07676 WD40-like Beta Propeller Repeat XOC_1258 PF00326 Prolyl oligopeptidase family XOC_1258 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region XOC_1261 PF12833 Helix-turn-helix domain XOC_1261 PF02311 AraC-like ligand binding domain XOC_1265 PF00199 Catalase XOC_1265 PF06628 Catalase-related immune-responsive XOC_1265 PF18011 C-terminal domain found in long catalases XOC_1268 PF01609 Transposase DDE domain XOC_1268 PF05598 Transposase domain (DUF772) XOC_1274 PF02347 Glycine cleavage system P-protein XOC_1278 PF03412 Peptidase C39 family XOC_1278 PF00005 ABC transporter XOC_1278 PF00664 ABC transporter transmembrane region XOC_1283 PF00884 Sulfatase XOC_1283 PF08019 Phosphoethanolamine transferase EptA/EptB XOC_1285 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase XOC_1286 PF00072 Response regulator receiver domain XOC_1286 PF00486 Transcriptional regulatory protein, C terminal XOC_1287 PF08521 Two-component sensor kinase N-terminal XOC_1287 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XOC_1287 PF00512 His Kinase A (phospho-acceptor) domain XOC_1289 PF03776 Septum formation topological specificity factor MinE XOC_1290 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain XOC_1291 PF05209 Septum formation inhibitor MinC, N-terminal domain XOC_1291 PF03775 Septum formation inhibitor MinC, C-terminal domain XOC_1294 PF07730 Histidine kinase XOC_1295 PF00196 Bacterial regulatory proteins, luxR family XOC_1295 PF00072 Response regulator receiver domain XOC_1298 PF00730 HhH-GPD superfamily base excision DNA repair protein XOC_1303 PF02222 ATP-grasp domain XOC_1311 PF00691 OmpA family XOC_1311 PF04972 BON domain XOC_1315 PF04717 Type VI secretion system, phage-baseplate injector XOC_1326 PF04717 Type VI secretion system, phage-baseplate injector XOC_1327 PF04717 Type VI secretion system, phage-baseplate injector XOC_1327 PF16671 Actin cross-linking domain XOC_1334 PF05598 Transposase domain (DUF772) XOC_1335 PF05598 Transposase domain (DUF772) XOC_1335 PF01609 Transposase DDE domain XOC_1336 PF00182 Chitinase class I XOC_1337 PF04717 Type VI secretion system, phage-baseplate injector XOC_1337 PF16671 Actin cross-linking domain XOC_1342 PF04717 Type VI secretion system, phage-baseplate injector XOC_1342 PF16671 Actin cross-linking domain XOC_1343 PF05598 Transposase domain (DUF772) XOC_1345 PF13276 HTH-like domain XOC_1345 PF13683 Integrase core domain XOC_1346 PF01527 Transposase XOC_1348 PF16671 Actin cross-linking domain XOC_1348 PF04717 Type VI secretion system, phage-baseplate injector XOC_1360 PF07724 AAA domain (Cdc48 subfamily) XOC_1360 PF00004 ATPase family associated with various cellular activities (AAA) XOC_1360 PF17871 AAA lid domain XOC_1360 PF10431 C-terminal, D2-small domain, of ClpB protein XOC_1362 PF04717 Type VI secretion system, phage-baseplate injector XOC_1362 PF16671 Actin cross-linking domain XOC_1368 PF05598 Transposase domain (DUF772) XOC_1370 PF04717 Type VI secretion system, phage-baseplate injector XOC_1370 PF16671 Actin cross-linking domain XOC_1376 PF05598 Transposase domain (DUF772) XOC_1387 PF01208 Uroporphyrinogen decarboxylase (URO-D) XOC_1389 PF01761 3-dehydroquinate synthase XOC_1390 PF01202 Shikimate kinase XOC_1391 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region XOC_1391 PF01243 Pyridoxamine 5'-phosphate oxidase XOC_1393 PF04012 PspA/IM30 family XOC_1398 PF03738 Glutathionylspermidine synthase preATP-grasp XOC_1405 PF00376 MerR family regulatory protein XOC_1405 PF09278 MerR, DNA binding XOC_1413 PF12706 Beta-lactamase superfamily domain XOC_1421 PF00324 Amino acid permease XOC_1422 PF00196 Bacterial regulatory proteins, luxR family XOC_1423 PF00561 alpha/beta hydrolase fold XOC_1425 PF00324 Amino acid permease XOC_1426 PF01654 Cytochrome bd terminal oxidase subunit I XOC_1427 PF02322 Cytochrome bd terminal oxidase subunit II XOC_1428 PF00756 Putative esterase XOC_1429 PF00571 CBS domain XOC_1429 PF01769 Divalent cation transporter XOC_1429 PF03448 MgtE intracellular N domain XOC_1431 PF05524 PEP-utilising enzyme, N-terminal XOC_1431 PF02896 PEP-utilising enzyme, TIM barrel domain XOC_1431 PF00391 PEP-utilising enzyme, mobile domain XOC_1432 PF00381 PTS HPr component phosphorylation site XOC_1435 PF03668 P-loop ATPase protein family XOC_1436 PF07475 HPr Serine kinase C-terminal domain XOC_1436 PF02603 HPr Serine kinase N terminus XOC_1437 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 XOC_1438 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein XOC_1439 PF00309 Sigma-54 factor, Activator interacting domain (AID) XOC_1439 PF04963 Sigma-54 factor, core binding domain XOC_1439 PF04552 Sigma-54, DNA binding domain XOC_1440 PF00005 ABC transporter XOC_1441 PF03968 OstA-like protein XOC_1444 PF01380 SIS domain XOC_1444 PF00571 CBS domain XOC_1445 PF01722 BolA-like protein XOC_1447 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) XOC_1451 PF00551 Formyl transferase XOC_1454 PF00586 AIR synthase related protein, N-terminal domain XOC_1454 PF02769 AIR synthase related protein, C-terminal domain XOC_1456 PF01594 AI-2E family transporter XOC_1457 PF00308 Bacterial dnaA protein XOC_1458 PF00483 Nucleotidyl transferase XOC_1459 PF01636 Phosphotransferase enzyme family XOC_1465 PF01546 Peptidase family M20/M25/M40 XOC_1465 PF07687 Peptidase dimerisation domain XOC_1468 PF05598 Transposase domain (DUF772) XOC_1468 PF01609 Transposase DDE domain XOC_1470 PF00355 Rieske [2Fe-2S] domain XOC_1472 PF00266 Aminotransferase class-V XOC_1473 PF01458 Uncharacterized protein family (UPF0051) XOC_1474 PF00005 ABC transporter XOC_1475 PF01458 Uncharacterized protein family (UPF0051) XOC_1476 PF02082 Transcriptional regulator XOC_1479 PF01965 DJ-1/PfpI family XOC_1485 PF14748 Pyrroline-5-carboxylate reductase dimerisation XOC_1485 PF03807 NADP oxidoreductase coenzyme F420-dependent XOC_1486 PF01168 Alanine racemase, N-terminal domain XOC_1487 PF00437 Type II/IV secretion system protein XOC_1488 PF00437 Type II/IV secretion system protein XOC_1491 PF00958 GMP synthase C terminal domain XOC_1491 PF00117 Glutamine amidotransferase class-I XOC_1491 PF03352 Methyladenine glycosylase XOC_1491 PF13302 Acetyltransferase (GNAT) domain XOC_1491 PF13673 Acetyltransferase (GNAT) domain XOC_1495 PF02622 Uncharacterized ACR, COG1678 XOC_1496 PF03652 Holliday junction resolvase XOC_1497 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain XOC_1497 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain XOC_1499 PF02566 OsmC-like protein XOC_1502 PF02567 Phenazine biosynthesis-like protein XOC_1503 PF02567 Phenazine biosynthesis-like protein XOC_1504 PF00696 Amino acid kinase family XOC_1504 PF01842 ACT domain XOC_1508 PF08245 Mur ligase middle domain XOC_1510 PF05598 Transposase domain (DUF772) XOC_1512 PF00348 Polyprenyl synthetase XOC_1514 PF00436 Single-strand binding protein family XOC_1515 PF00563 EAL domain XOC_1515 PF00990 Diguanylate cyclase, GGDEF domain XOC_1515 PF00360 Phytochrome region XOC_1515 PF01590 GAF domain XOC_1516 PF00698 Acyl transferase domain XOC_1516 PF16197 Ketoacyl-synthetase C-terminal extension XOC_1516 PF08240 Alcohol dehydrogenase GroES-like domain XOC_1516 PF02801 Beta-ketoacyl synthase, C-terminal domain XOC_1516 PF14765 Polyketide synthase dehydratase XOC_1516 PF00550 Phosphopantetheine attachment site XOC_1516 PF00107 Zinc-binding dehydrogenase XOC_1516 PF00109 Beta-ketoacyl synthase, N-terminal domain XOC_1516 PF08659 KR domain XOC_1518 PF00111 2Fe-2S iron-sulfur cluster binding domain XOC_1518 PF10518 TAT (twin-arginine translocation) pathway signal sequence XOC_1518 PF01799 [2Fe-2S] binding domain XOC_1519 PF03450 CO dehydrogenase flavoprotein C-terminal domain XOC_1519 PF00941 FAD binding domain in molybdopterin dehydrogenase XOC_1520 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain XOC_1520 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase XOC_1521 PF02625 XdhC and CoxI family XOC_1521 PF13478 XdhC Rossmann domain XOC_1531 PF04328 Selenoprotein, putative XOC_1532 PF13722 5TM C-terminal transporter carbon starvation CstA XOC_1532 PF02554 Carbon starvation protein CstA XOC_1533 PF02678 Pirin XOC_1533 PF05726 Pirin C-terminal cupin domain XOC_1535 PF04717 Type VI secretion system, phage-baseplate injector XOC_1540 PF04717 Type VI secretion system, phage-baseplate injector XOC_1553 PF04493 Endonuclease V XOC_1554 PF00300 Histidine phosphatase superfamily (branch 1) XOC_1555 PF13276 HTH-like domain XOC_1555 PF13683 Integrase core domain XOC_1556 PF01527 Transposase XOC_1557 PF03377 TAL effector repeat XOC_1560 PF04717 Type VI secretion system, phage-baseplate injector XOC_1560 PF16671 Actin cross-linking domain XOC_1561a PF13333 Integrase core domain XOC_1561a PF13276 HTH-like domain XOC_1561a PF00665 Integrase core domain XOC_1565 PF03377 TAL effector repeat XOC_1566 PF03377 TAL effector repeat XOC_1567 PF03377 TAL effector repeat XOC_1570 PF03377 TAL effector repeat XOC_1572 PF03377 TAL effector repeat XOC_1575 PF03377 TAL effector repeat XOC_1578 PF16671 Actin cross-linking domain XOC_1578 PF04717 Type VI secretion system, phage-baseplate injector XOC_1580 PF01527 Transposase XOC_1581 PF01527 Transposase XOC_1582 PF13276 HTH-like domain XOC_1582 PF00665 Integrase core domain XOC_1582 PF13333 Integrase core domain XOC_1583 PF03377 TAL effector repeat XOC_1584 PF16671 Actin cross-linking domain XOC_1584 PF04717 Type VI secretion system, phage-baseplate injector XOC_1586 PF01527 Transposase XOC_1587 PF01527 Transposase XOC_1588 PF00072 Response regulator receiver domain XOC_1588 PF01339 CheB methylesterase XOC_1589 PF03705 CheR methyltransferase, all-alpha domain XOC_1589 PF01739 CheR methyltransferase, SAM binding domain XOC_1590 PF13426 PAS domain XOC_1590 PF00563 EAL domain XOC_1590 PF00990 Diguanylate cyclase, GGDEF domain XOC_1591 PF01584 CheW-like domain XOC_1592 PF02203 Tar ligand binding domain homologue XOC_1592 PF00672 HAMP domain XOC_1592 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XOC_1593 PF01627 Hpt domain XOC_1593 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XOC_1593 PF02895 Signal transducing histidine kinase, homodimeric domain XOC_1593 PF09078 CheY binding XOC_1593 PF01584 CheW-like domain XOC_1597 PF17757 UvrB interaction domain XOC_1597 PF02559 CarD-like/TRCF domain XOC_1597 PF00270 DEAD/DEAH box helicase XOC_1597 PF00271 Helicase conserved C-terminal domain XOC_1597 PF03461 TRCF domain XOC_1599 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ XOC_1600 PF00512 His Kinase A (phospho-acceptor) domain XOC_1600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XOC_1600 PF00672 HAMP domain XOC_1604 PF00795 Carbon-nitrogen hydrolase XOC_1606 PF00749 tRNA synthetases class I (E and Q), catalytic domain XOC_1607 PF01475 Ferric uptake regulator family XOC_1616 PF07715 TonB-dependent Receptor Plug Domain XOC_1616 PF00593 TonB dependent receptor XOC_1619 PF00107 Zinc-binding dehydrogenase XOC_1619 PF08240 Alcohol dehydrogenase GroES-like domain XOC_1620 PF00654 Voltage gated chloride channel XOC_1624 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain XOC_1624 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain XOC_1631 PF04539 Sigma-70 region 3 XOC_1631 PF04545 Sigma-70, region 4 XOC_1631 PF04542 Sigma-70 region 2 XOC_1632 PF00270 DEAD/DEAH box helicase XOC_1632 PF00271 Helicase conserved C-terminal domain XOC_1632 PF03880 DbpA RNA binding domain XOC_1633 PF00563 EAL domain XOC_1633 PF08448 PAS fold XOC_1633 PF00990 Diguanylate cyclase, GGDEF domain XOC_1634 PF01479 S4 domain XOC_1634 PF00849 RNA pseudouridylate synthase XOC_1638 PF03737 Aldolase/RraA XOC_1639 PF00144 Beta-lactamase XOC_1640 PF00999 Sodium/hydrogen exchanger family XOC_1641 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XOC_1641 PF00512 His Kinase A (phospho-acceptor) domain XOC_1641 PF00672 HAMP domain XOC_1642 PF00486 Transcriptional regulatory protein, C terminal XOC_1642 PF00072 Response regulator receiver domain XOC_1643 PF02321 Outer membrane efflux protein XOC_1646 PF00873 AcrB/AcrD/AcrF family XOC_1648 PF00005 ABC transporter XOC_1648 PF00664 ABC transporter transmembrane region XOC_1652 PF00665 Integrase core domain XOC_1652 PF13936 Helix-turn-helix domain XOC_1664 PF00085 Thioredoxin XOC_1666 PF13603 Leucyl-tRNA synthetase, Domain 2 XOC_1666 PF00133 tRNA synthetases class I (I, L, M and V) XOC_1666 PF08264 Anticodon-binding domain of tRNA XOC_1669 PF01467 Cytidylyltransferase-like XOC_1673 PF02590 Predicted SPOUT methyltransferase XOC_1676 PF04402 Protein of unknown function (DUF541) XOC_1677 PF02545 Maf-like protein XOC_1678 PF10150 Ribonuclease E/G family XOC_1678 PF00575 S1 RNA binding domain XOC_1679 PF13116 Protein of unknown function XOC_1679 PF13502 AsmA-like C-terminal region XOC_1681 PF01523 Putative modulator of DNA gyrase XOC_1682 PF04751 Protein of unknown function (DUF615) XOC_1683 PF01523 Putative modulator of DNA gyrase XOC_1688 PF14521 Lysine-specific metallo-endopeptidase XOC_1689 PF00348 Polyprenyl synthetase XOC_1690 PF02609 Exonuclease VII small subunit XOC_1691 PF09179 TilS substrate binding domain XOC_1691 PF11734 TilS substrate C-terminal domain XOC_1691 PF01171 PP-loop family XOC_1692 PF00245 Alkaline phosphatase XOC_1693 PF00375 Sodium:dicarboxylate symporter family XOC_1697 PF00877 NlpC/P60 family XOC_1698 PF00877 NlpC/P60 family XOC_1699 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XOC_1700 PF04235 Protein of unknown function (DUF418) XOC_1701 PF01266 FAD dependent oxidoreductase XOC_1702 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain XOC_1702 PF07992 Pyridine nucleotide-disulphide oxidoreductase XOC_1704 PF03377 TAL effector repeat XOC_1706 PF01527 Transposase XOC_1707 PF13276 HTH-like domain XOC_1707 PF13683 Integrase core domain XOC_1709 PF03377 TAL effector repeat XOC_1710 PF13333 Integrase core domain XOC_1710 PF13276 HTH-like domain XOC_1710 PF00665 Integrase core domain XOC_1711 PF01527 Transposase XOC_1712 PF01527 Transposase XOC_1714 PF04717 Type VI secretion system, phage-baseplate injector XOC_1714 PF16671 Actin cross-linking domain XOC_1716 PF03377 TAL effector repeat XOC_1718 PF01527 Transposase XOC_1721 PF05598 Transposase domain (DUF772) XOC_1727 PF01431 Peptidase family M13 XOC_1727 PF05649 Peptidase family M13 XOC_1728 PF05598 Transposase domain (DUF772) XOC_1730 PF00082 Subtilase family XOC_1731 PF01668 SmpB protein XOC_1732 PF03364 Polyketide cyclase / dehydrase and lipid transport XOC_1734 PF03658 RnfH family Ubiquitin XOC_1735 PF04355 SmpA / OmlA family XOC_1736 PF01475 Ferric uptake regulator family XOC_1737 PF02463 RecF/RecN/SMC N terminal domain XOC_1738 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding XOC_1738 PF01628 HrcA protein C terminal domain XOC_1739 PF01025 GrpE XOC_1740 PF00012 Hsp70 protein XOC_1741 PF00684 DnaJ central domain XOC_1741 PF01556 DnaJ C terminal domain XOC_1741 PF00226 DnaJ domain XOC_1742 PF08543 Phosphomethylpyrimidine kinase XOC_1746 PF03466 LysR substrate binding domain XOC_1746 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XOC_1747 PF00664 ABC transporter transmembrane region XOC_1747 PF00005 ABC transporter XOC_1749 PF01205 Uncharacterized protein family UPF0029 XOC_1750 PF03641 Possible lysine decarboxylase XOC_1751 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain XOC_1751 PF07992 Pyridine nucleotide-disulphide oxidoreductase XOC_1752 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) XOC_1752 PF00364 Biotin-requiring enzyme XOC_1752 PF02817 e3 binding domain XOC_1753 PF16870 2-oxoglutarate dehydrogenase C-terminal XOC_1753 PF00676 Dehydrogenase E1 component XOC_1753 PF16078 2-oxoglutarate dehydrogenase N-terminus XOC_1753 PF02779 Transketolase, pyrimidine binding domain XOC_1755 PF08007 Cupin superfamily protein XOC_1758 PF00206 Lyase XOC_1758 PF08328 Adenylosuccinate lyase C-terminal XOC_1760 PF03471 Transporter associated domain XOC_1760 PF00571 CBS domain XOC_1761 PF01595 Cyclin M transmembrane N-terminal domain XOC_1761 PF03471 Transporter associated domain XOC_1761 PF00571 CBS domain XOC_1763 PF00206 Lyase XOC_1763 PF10415 Fumarase C C-terminus XOC_1769 PF00005 ABC transporter XOC_1770 PF00392 Bacterial regulatory proteins, gntR family XOC_1771 PF00255 Glutathione peroxidase XOC_1773 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase XOC_1773 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XOC_1774 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain XOC_1774 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain XOC_1774 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain XOC_1775 PF04102 SlyX XOC_1779 PF07690 Major Facilitator Superfamily XOC_1780 PF00294 pfkB family carbohydrate kinase XOC_1782 PF02310 B12 binding domain XOC_1782 PF02607 B12 binding domain XOC_1782 PF00809 Pterin binding enzyme XOC_1782 PF02574 Homocysteine S-methyltransferase XOC_1782 PF02965 Vitamin B12 dependent methionine synthase, activation domain XOC_1783 PF02574 Homocysteine S-methyltransferase XOC_1783 PF00809 Pterin binding enzyme XOC_1783 PF02310 B12 binding domain XOC_1783 PF02607 B12 binding domain XOC_1783 PF02965 Vitamin B12 dependent methionine synthase, activation domain XOC_1784 PF02574 Homocysteine S-methyltransferase XOC_1784 PF00809 Pterin binding enzyme XOC_1784 PF02310 B12 binding domain XOC_1784 PF02607 B12 binding domain XOC_1784 PF02965 Vitamin B12 dependent methionine synthase, activation domain XOC_1785 PF02574 Homocysteine S-methyltransferase XOC_1785 PF00809 Pterin binding enzyme XOC_1786 PF02574 Homocysteine S-methyltransferase XOC_1786 PF00809 Pterin binding enzyme XOC_1787 PF01209 ubiE/COQ5 methyltransferase family XOC_1788 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XOC_1788 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XOC_1788 PF02770 Acyl-CoA dehydrogenase, middle domain XOC_1792 PF17876 Cold shock domain XOC_1792 PF00575 S1 RNA binding domain XOC_1792 PF00773 RNB domain XOC_1792 PF08206 Ribonuclease B OB domain XOC_1792 PF08461 Ribonuclease R winged-helix domain XOC_1794 PF00588 SpoU rRNA Methylase family XOC_1794 PF08032 RNA 2'-O ribose methyltransferase substrate binding XOC_1795 PF07694 5TMR of 5TMR-LYT XOC_1795 PF00990 Diguanylate cyclase, GGDEF domain XOC_1796 PF00929 Exonuclease XOC_1798 PF01895 PhoU domain XOC_1799 PF00005 ABC transporter XOC_1801 PF00528 Binding-protein-dependent transport system inner membrane component XOC_1802 PF00528 Binding-protein-dependent transport system inner membrane component XOC_1803 PF12849 PBP superfamily domain XOC_1804 PF12849 PBP superfamily domain XOC_1807 PF00484 Carbonic anhydrase XOC_1808 PF00916 Sulfate permease family XOC_1808 PF01740 STAS domain XOC_1809 PF00730 HhH-GPD superfamily base excision DNA repair protein XOC_1809 PF10576 Iron-sulfur binding domain of endonuclease III XOC_1809 PF00633 Helix-hairpin-helix motif XOC_1811 PF00378 Enoyl-CoA hydratase/isomerase XOC_1813 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XOC_1813 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase XOC_1814 PF00293 NUDIX domain XOC_1815 PF00581 Rhodanese-like domain XOC_1822 PF00005 ABC transporter XOC_1823 PF01170 Putative RNA methylase family UPF0020 XOC_1823 PF10672 S-adenosylmethionine-dependent methyltransferase XOC_1823 PF02926 THUMP domain XOC_1824 PF01513 ATP-NAD kinase XOC_1827 PF00248 Aldo/keto reductase family XOC_1829 PF00929 Exonuclease XOC_1829 PF08411 Exonuclease C-terminal XOC_1830 PF01494 FAD binding domain XOC_1831 PF00266 Aminotransferase class-V XOC_1833 PF06052 3-hydroxyanthranilic acid dioxygenase XOC_1834 PF00484 Carbonic anhydrase XOC_1839 PF00152 tRNA synthetases class II (D, K and N) XOC_1839 PF01336 OB-fold nucleic acid binding domain XOC_1840 PF01521 Iron-sulphur cluster biosynthesis XOC_1841 PF01250 Ribosomal protein S6 XOC_1842 PF01084 Ribosomal protein S18 XOC_1843 PF01281 Ribosomal protein L9, N-terminal domain XOC_1843 PF03948 Ribosomal protein L9, C-terminal domain XOC_1844 PF02463 RecF/RecN/SMC N terminal domain XOC_1845 PF04354 ZipA, C-terminal FtsZ-binding domain XOC_1849 PF00533 BRCA1 C Terminus (BRCT) domain XOC_1849 PF03120 NAD-dependent DNA ligase OB-fold domain XOC_1849 PF01653 NAD-dependent DNA ligase adenylation domain XOC_1849 PF03119 NAD-dependent DNA ligase C4 zinc finger domain XOC_1849 PF12826 Helix-hairpin-helix motif XOC_1850 PF00152 tRNA synthetases class II (D, K and N) XOC_1852 PF01008 Initiation factor 2 subunit family XOC_1853 PF00521 DNA gyrase/topoisomerase IV, subunit A XOC_1853 PF03989 DNA gyrase C-terminal domain, beta-propeller XOC_1854 PF05598 Transposase domain (DUF772) XOC_1858 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) XOC_1858 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain XOC_1858 PF02824 TGS domain XOC_1858 PF03129 Anticodon binding domain XOC_1859 PF05198 Translation initiation factor IF-3, N-terminal domain XOC_1859 PF00707 Translation initiation factor IF-3, C-terminal domain XOC_1860 PF01632 Ribosomal protein L35 XOC_1861 PF00453 Ribosomal protein L20 XOC_1862 PF01409 tRNA synthetases class II core domain (F) XOC_1862 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain XOC_1863 PF03483 B3/4 domain XOC_1863 PF03484 tRNA synthetase B5 domain XOC_1863 PF03147 Ferredoxin-fold anticodon binding domain XOC_1863 PF01588 Putative tRNA binding domain XOC_1863 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain XOC_1864 PF00216 Bacterial DNA-binding protein XOC_1865 PF13411 MerR HTH family regulatory protein XOC_1869 PF02397 Bacterial sugar transferase XOC_1873 PF13439 Glycosyltransferase Family 4 XOC_1873 PF00534 Glycosyl transferases group 1 XOC_1875 PF14667 Polysaccharide biosynthesis C-terminal domain XOC_1878 PF03808 Glycosyl transferase WecB/TagA/CpsF family XOC_1883 PF02779 Transketolase, pyrimidine binding domain XOC_1883 PF02780 Transketolase, C-terminal domain XOC_1883 PF13292 1-deoxy-D-xylulose-5-phosphate synthase XOC_1885 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XOC_1885 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XOC_1885 PF02770 Acyl-CoA dehydrogenase, middle domain XOC_1885 PF12806 Acetyl-CoA dehydrogenase C-terminal like XOC_1887 PF08212 Lipocalin-like domain XOC_1897 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XOC_1897 PF00072 Response regulator receiver domain XOC_1897 PF13426 PAS domain XOC_1900 PF04362 Bacterial Fe(2+) trafficking XOC_1901 PF10576 Iron-sulfur binding domain of endonuclease III XOC_1901 PF14815 NUDIX domain XOC_1901 PF00730 HhH-GPD superfamily base excision DNA repair protein XOC_1901 PF00633 Helix-hairpin-helix motif XOC_1903 PF02881 SRP54-type protein, helical bundle domain XOC_1903 PF00448 SRP54-type protein, GTPase domain XOC_1905 PF05544 Proline racemase XOC_1906 PF01266 FAD dependent oxidoreductase XOC_1908 PF04324 BFD-like [2Fe-2S] binding domain XOC_1908 PF07992 Pyridine nucleotide-disulphide oxidoreductase XOC_1909 PF00701 Dihydrodipicolinate synthetase family XOC_1910 PF00171 Aldehyde dehydrogenase family XOC_1911 PF01321 Creatinase/Prolidase N-terminal domain XOC_1911 PF00557 Metallopeptidase family M24 XOC_1914 PF13520 Amino acid permease XOC_1923 PF09286 Pro-kumamolisin, activation domain XOC_1923 PF00082 Subtilase family XOC_1927 PF00593 TonB dependent receptor XOC_1927 PF07715 TonB-dependent Receptor Plug Domain XOC_1928 PF07532 Bacterial Ig-like domain (group 4) XOC_1929 PF04616 Glycosyl hydrolases family 43 XOC_1931 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region XOC_1931 PF00326 Prolyl oligopeptidase family XOC_1935 PF07715 TonB-dependent Receptor Plug Domain XOC_1935 PF00593 TonB dependent receptor XOC_1939 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XOC_1939 PF00183 Hsp90 protein XOC_1941 PF01467 Cytidylyltransferase-like XOC_1943 PF00037 4Fe-4S binding domain XOC_1956 PF02547 Queuosine biosynthesis protein XOC_1957 PF01702 Queuine tRNA-ribosyltransferase XOC_1958 PF02699 Preprotein translocase subunit XOC_1961 PF13721 SecD export protein N-terminal TM region XOC_1961 PF02355 Protein export membrane protein XOC_1961 PF07549 SecD/SecF GG Motif XOC_1962 PF07549 SecD/SecF GG Motif XOC_1962 PF02355 Protein export membrane protein XOC_1965 PF01527 Transposase XOC_1967 PF13276 HTH-like domain XOC_1967 PF13683 Integrase core domain XOC_1970 PF01593 Flavin containing amine oxidoreductase XOC_1971 PF05598 Transposase domain (DUF772) XOC_1971 PF01609 Transposase DDE domain XOC_1973 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit XOC_1974 PF00294 pfkB family carbohydrate kinase XOC_1975 PF05524 PEP-utilising enzyme, N-terminal XOC_1975 PF02896 PEP-utilising enzyme, TIM barrel domain XOC_1975 PF00381 PTS HPr component phosphorylation site XOC_1975 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 XOC_1975 PF00391 PEP-utilising enzyme, mobile domain XOC_1976 PF00356 Bacterial regulatory proteins, lacI family XOC_1977 PF01609 Transposase DDE domain XOC_1977 PF13006 Insertion element 4 transposase N-terminal XOC_1978 PF00873 AcrB/AcrD/AcrF family XOC_1979 PF00529 HlyD membrane-fusion protein of T1SS XOC_1979 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XOC_1981 PF05088 Bacterial NAD-glutamate dehydrogenase XOC_1983 PF07690 Major Facilitator Superfamily XOC_1984 PF00072 Response regulator receiver domain XOC_1985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XOC_1985 PF00512 His Kinase A (phospho-acceptor) domain XOC_1985 PF00672 HAMP domain XOC_1985 PF01627 Hpt domain XOC_1985 PF00072 Response regulator receiver domain XOC_1985 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) XOC_1986 PF04286 Protein of unknown function (DUF445) XOC_1988 PF00005 ABC transporter XOC_1989 PF00202 Aminotransferase class-III XOC_1990 PF07690 Major Facilitator Superfamily XOC_1991 PF02634 FdhD/NarQ family XOC_1992 PF00384 Molybdopterin oxidoreductase XOC_1993 PF07690 Major Facilitator Superfamily XOC_1993 PF00083 Sugar (and other) transporter XOC_1994 PF00072 Response regulator receiver domain XOC_1994 PF00990 Diguanylate cyclase, GGDEF domain XOC_1995 PF01266 FAD dependent oxidoreductase XOC_1996 PF00120 Glutamine synthetase, catalytic domain XOC_1997 PF07722 Peptidase C26 XOC_1999 PF00120 Glutamine synthetase, catalytic domain XOC_2004 PF04717 Type VI secretion system, phage-baseplate injector XOC_2004 PF16671 Actin cross-linking domain XOC_2007 PF03377 TAL effector repeat XOC_2009 PF03377 TAL effector repeat XOC_2010 PF03377 TAL effector repeat XOC_2012 PF16671 Actin cross-linking domain XOC_2012 PF04717 Type VI secretion system, phage-baseplate injector XOC_2015 PF00202 Aminotransferase class-III XOC_2016 PF13416 Bacterial extracellular solute-binding protein XOC_2017 PF13533 Biotin-lipoyl like XOC_2018 PF07690 Major Facilitator Superfamily XOC_2019 PF02321 Outer membrane efflux protein XOC_2020 PF08402 TOBE domain XOC_2020 PF00005 ABC transporter XOC_2021 PF00528 Binding-protein-dependent transport system inner membrane component XOC_2022 PF00528 Binding-protein-dependent transport system inner membrane component XOC_2024 PF00171 Aldehyde dehydrogenase family XOC_2027 PF00571 CBS domain XOC_2027 PF03471 Transporter associated domain XOC_2029 PF02130 Uncharacterized protein family UPF0054 XOC_2031 PF02562 PhoH-like protein XOC_2032 PF04055 Radical SAM superfamily XOC_2032 PF01938 TRAM domain XOC_2032 PF00919 Uncharacterized protein family UPF0004 XOC_2035 PF01464 Transglycosylase SLT domain XOC_2037 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal XOC_2037 PF00355 Rieske [2Fe-2S] domain XOC_2038 PF00032 Cytochrome b(C-terminal)/b6/petD XOC_2038 PF00033 Cytochrome b/b6/petB XOC_2039 PF02167 Cytochrome C1 family XOC_2040 PF02798 Glutathione S-transferase, N-terminal domain XOC_2040 PF00043 Glutathione S-transferase, C-terminal domain XOC_2041 PF04386 Stringent starvation protein B XOC_2045 PF00271 Helicase conserved C-terminal domain XOC_2045 PF08494 DEAD/H associated XOC_2045 PF00270 DEAD/DEAH box helicase XOC_2048 PF00672 HAMP domain XOC_2048 PF02743 Cache domain XOC_2048 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XOC_2049 PF01584 CheW-like domain XOC_2061 PF03328 HpcH/HpaI aldolase/citrate lyase family XOC_2066 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase XOC_2071 PF00291 Pyridoxal-phosphate dependent enzyme XOC_2081 PF01068 ATP dependent DNA ligase domain XOC_2081 PF04679 ATP dependent DNA ligase C terminal region XOC_2081 PF13298 DNA polymerase Ligase (LigD) XOC_2083 PF13298 DNA polymerase Ligase (LigD) XOC_2083 PF04679 ATP dependent DNA ligase C terminal region XOC_2083 PF01068 ATP dependent DNA ligase domain XOC_2085 PF01068 ATP dependent DNA ligase domain XOC_2085 PF13298 DNA polymerase Ligase (LigD) XOC_2085 PF04679 ATP dependent DNA ligase C terminal region XOC_2086 PF01612 3'-5' exonuclease XOC_2086 PF00570 HRDC domain XOC_2088 PF03781 Sulfatase-modifying factor enzyme 1 XOC_2090 PF13742 OB-fold nucleic acid binding domain XOC_2090 PF02601 Exonuclease VII, large subunit XOC_2091 PF08331 Domain of unknown function (DUF1730) XOC_2092 PF03853 YjeF-related protein N-terminus XOC_2092 PF01256 Carbohydrate kinase XOC_2093 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE XOC_2094 PF01520 N-acetylmuramoyl-L-alanine amidase XOC_2094 PF11741 AMIN domain XOC_2095 PF01119 DNA mismatch repair protein, C-terminal domain XOC_2095 PF08676 MutL C terminal dimerisation domain XOC_2098 PF07879 PHB/PHA accumulation regulator DNA-binding domain XOC_2098 PF05233 PHB accumulation regulatory domain XOC_2099 PF00106 short chain dehydrogenase XOC_2100 PF00749 tRNA synthetases class I (E and Q), catalytic domain XOC_2101 PF01435 Peptidase family M48 XOC_2102 PF00072 Response regulator receiver domain XOC_2102 PF00990 Diguanylate cyclase, GGDEF domain XOC_2102 PF00563 EAL domain XOC_2104 PF07152 YaeQ protein XOC_2105 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 XOC_2106 PF00313 'Cold-shock' DNA-binding domain XOC_2107 PF14497 Glutathione S-transferase, C-terminal domain XOC_2107 PF02798 Glutathione S-transferase, N-terminal domain XOC_2109 PF02696 Uncharacterized ACR, YdiU/UPF0061 family XOC_2110 PF00156 Phosphoribosyl transferase domain XOC_2111 PF00271 Helicase conserved C-terminal domain XOC_2111 PF00270 DEAD/DEAH box helicase XOC_2111 PF03880 DbpA RNA binding domain XOC_2115 PF00545 ribonuclease XOC_2116 PF02777 Iron/manganese superoxide dismutases, C-terminal domain XOC_2116 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain XOC_2117 PF00459 Inositol monophosphatase family XOC_2118 PF00588 SpoU rRNA Methylase family XOC_2120 PF00563 EAL domain XOC_2120 PF00990 Diguanylate cyclase, GGDEF domain XOC_2120 PF03707 Bacterial signalling protein N terminal repeat XOC_2120 PF13188 PAS domain XOC_2121 PF04055 Radical SAM superfamily XOC_2122 PF09285 Elongation factor P, C-terminal XOC_2122 PF01132 Elongation factor P (EF-P) OB domain XOC_2122 PF08207 Elongation factor P (EF-P) KOW-like domain XOC_2124 PF01979 Amidohydrolase family XOC_2126 PF13419 Haloacid dehalogenase-like hydrolase XOC_2128 PF00295 Glycosyl hydrolases family 28 XOC_2136 PF03466 LysR substrate binding domain XOC_2136 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XOC_2141 PF08543 Phosphomethylpyrimidine kinase XOC_2141 PF02581 Thiamine monophosphate synthase XOC_2143 PF02562 PhoH-like protein XOC_2143 PF13638 PIN domain XOC_2144 PF00578 AhpC/TSA family XOC_2147 PF00701 Dihydrodipicolinate synthetase family XOC_2149 PF00037 4Fe-4S binding domain XOC_2149 PF11953 Domain of unknown function (DUF3470) XOC_2150 PF05035 2-keto-3-deoxy-galactonokinase XOC_2151 PF08450 SMP-30/Gluconolactonase/LRE-like region XOC_2152 PF13378 Enolase C-terminal domain-like XOC_2152 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain XOC_2153 PF01081 KDPG and KHG aldolase XOC_2154 PF03466 LysR substrate binding domain XOC_2154 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XOC_2156 PF16338 Domain of unknown function (DUF4968) XOC_2156 PF17137 Domain of unknown function (DUF5110) XOC_2156 PF01055 Glycosyl hydrolases family 31 XOC_2157 PF16338 Domain of unknown function (DUF4968) XOC_2157 PF01055 Glycosyl hydrolases family 31 XOC_2157 PF17137 Domain of unknown function (DUF5110) XOC_2158 PF17137 Domain of unknown function (DUF5110) XOC_2158 PF01055 Glycosyl hydrolases family 31 XOC_2158 PF16338 Domain of unknown function (DUF4968) XOC_2160 PF00370 FGGY family of carbohydrate kinases, N-terminal domain XOC_2160 PF02782 FGGY family of carbohydrate kinases, C-terminal domain XOC_2162 PF00083 Sugar (and other) transporter XOC_2163 PF01520 N-acetylmuramoyl-L-alanine amidase XOC_2164 PF02649 Type I GTP cyclohydrolase folE2 XOC_2167 PF01743 Poly A polymerase head domain XOC_2167 PF12627 Probable RNA and SrmB- binding site of polymerase A XOC_2167 PF12626 Polymerase A arginine-rich C-terminus XOC_2168 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) XOC_2169 PF02548 Ketopantoate hydroxymethyltransferase XOC_2170 PF02569 Pantoate-beta-alanine ligase XOC_2171 PF02261 Aspartate decarboxylase XOC_2172 PF00342 Phosphoglucose isomerase XOC_2177 PF14310 Fibronectin type III-like domain XOC_2177 PF01915 Glycosyl hydrolase family 3 C-terminal domain XOC_2177 PF00933 Glycosyl hydrolase family 3 N terminal domain XOC_2178 PF00474 Sodium:solute symporter family XOC_2179 PF01590 GAF domain XOC_2179 PF00360 Phytochrome region XOC_2179 PF00563 EAL domain XOC_2179 PF00990 Diguanylate cyclase, GGDEF domain XOC_2180 PF00150 Cellulase (glycosyl hydrolase family 5) XOC_2180 PF02013 Cellulose or protein binding domain XOC_2181 PF00072 Response regulator receiver domain XOC_2183 PF04551 GcpE protein XOC_2184 PF01569 PAP2 superfamily XOC_2185 PF07690 Major Facilitator Superfamily XOC_2188 PF00892 EamA-like transporter family XOC_2189 PF01565 FAD binding domain XOC_2189 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain XOC_2190 PF01180 Dihydroorotate dehydrogenase XOC_2193 PF00171 Aldehyde dehydrogenase family XOC_2195 PF03073 TspO/MBR family XOC_2197 PF13840 ACT domain XOC_2197 PF01842 ACT domain XOC_2197 PF00742 Homoserine dehydrogenase XOC_2197 PF00696 Amino acid kinase family XOC_2197 PF03447 Homoserine dehydrogenase, NAD binding domain XOC_2198 PF08544 GHMP kinases C terminal XOC_2198 PF00288 GHMP kinases N terminal domain XOC_2200 PF01527 Transposase XOC_2201 PF13683 Integrase core domain XOC_2201 PF13276 HTH-like domain XOC_2205 PF07519 Tannase and feruloyl esterase XOC_2208 PF14821 Threonine synthase N terminus XOC_2208 PF00291 Pyridoxal-phosphate dependent enzyme XOC_2210 PF00027 Cyclic nucleotide-binding domain XOC_2210 PF13545 Crp-like helix-turn-helix domain XOC_2213 PF13393 Histidyl-tRNA synthetase XOC_2213 PF03129 Anticodon binding domain XOC_2215 PF08029 HisG, C-terminal domain XOC_2215 PF01634 ATP phosphoribosyltransferase XOC_2216 PF00815 Histidinol dehydrogenase XOC_2217 PF00155 Aminotransferase class I and II XOC_2218 PF00475 Imidazoleglycerol-phosphate dehydratase XOC_2219 PF00117 Glutamine amidotransferase class-I XOC_2220 PF00977 Histidine biosynthesis protein XOC_2221 PF00977 Histidine biosynthesis protein XOC_2222 PF01502 Phosphoribosyl-AMP cyclohydrolase XOC_2222 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase XOC_2227 PF03079 ARD/ARD' family XOC_2228 PF00596 Class II Aldolase and Adducin N-terminal domain XOC_2229 PF13520 Amino acid permease XOC_2230 PF13520 Amino acid permease XOC_2232 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain XOC_2232 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain XOC_2233 PF01565 FAD binding domain XOC_2233 PF02913 FAD linked oxidases, C-terminal domain XOC_2237 PF01132 Elongation factor P (EF-P) OB domain XOC_2237 PF09285 Elongation factor P, C-terminal XOC_2237 PF08207 Elongation factor P (EF-P) KOW-like domain XOC_2238 PF00106 short chain dehydrogenase XOC_2239 PF00682 HMGL-like XOC_2241 PF00378 Enoyl-CoA hydratase/isomerase XOC_2243 PF07670 Nucleoside recognition XOC_2243 PF02421 Ferrous iron transport protein B XOC_2243 PF07664 Ferrous iron transport protein B C terminus XOC_2247 PF00155 Aminotransferase class I and II XOC_2248 PF03475 3-alpha domain XOC_2248 PF03473 MOSC domain XOC_2249 PF01113 Dihydrodipicolinate reductase, N-terminus XOC_2249 PF05173 Dihydrodipicolinate reductase, C-terminus XOC_2251 PF00117 Glutamine amidotransferase class-I XOC_2251 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain XOC_2253 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain XOC_2253 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain XOC_2253 PF02142 MGS-like domain XOC_2254 PF01272 Transcription elongation factor, GreA/GreB, C-term XOC_2254 PF03449 Transcription elongation factor, N-terminal XOC_2256 PF01368 DHH family XOC_2256 PF17768 RecJ OB domain XOC_2256 PF02272 DHHA1 domain XOC_2260 PF00072 Response regulator receiver domain XOC_2260 PF04397 LytTr DNA-binding domain XOC_2262 PF00152 tRNA synthetases class II (D, K and N) XOC_2262 PF01336 OB-fold nucleic acid binding domain XOC_2264 PF00072 Response regulator receiver domain XOC_2265 PF01627 Hpt domain XOC_2265 PF00072 Response regulator receiver domain XOC_2265 PF00512 His Kinase A (phospho-acceptor) domain XOC_2265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XOC_2266 PF00378 Enoyl-CoA hydratase/isomerase XOC_2267 PF00501 AMP-binding enzyme XOC_2267 PF13193 AMP-binding enzyme C-terminal domain XOC_2270 PF00694 Aconitase C-terminal domain XOC_2270 PF00330 Aconitase family (aconitate hydratase) XOC_2273 PF00330 Aconitase family (aconitate hydratase) XOC_2273 PF06434 Aconitate hydratase 2 N-terminus XOC_2273 PF11791 Aconitate B N-terminal domain XOC_2275 PF00561 alpha/beta hydrolase fold XOC_2277 PF03707 Bacterial signalling protein N terminal repeat XOC_2277 PF00990 Diguanylate cyclase, GGDEF domain XOC_2277 PF00563 EAL domain XOC_2278 PF00072 Response regulator receiver domain XOC_2278 PF01339 CheB methylesterase XOC_2279 PF03975 CheD chemotactic sensory transduction XOC_2280 PF03705 CheR methyltransferase, all-alpha domain XOC_2280 PF01739 CheR methyltransferase, SAM binding domain XOC_2282 PF00672 HAMP domain XOC_2282 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XOC_2282 PF02203 Tar ligand binding domain homologue XOC_2284 PF01584 CheW-like domain XOC_2285 PF07238 PilZ domain XOC_2285 PF07317 Flagellar regulator YcgR XOC_2286 PF00672 HAMP domain XOC_2286 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XOC_2286 PF02203 Tar ligand binding domain homologue XOC_2287 PF02203 Tar ligand binding domain homologue XOC_2287 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XOC_2287 PF00672 HAMP domain XOC_2289 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XOC_2289 PF00672 HAMP domain XOC_2289 PF02203 Tar ligand binding domain homologue XOC_2290 PF00672 HAMP domain XOC_2290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XOC_2290 PF02203 Tar ligand binding domain homologue XOC_2291 PF00672 HAMP domain XOC_2291 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XOC_2291 PF02203 Tar ligand binding domain homologue XOC_2293 PF00672 HAMP domain XOC_2293 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XOC_2293 PF02203 Tar ligand binding domain homologue XOC_2294 PF00672 HAMP domain XOC_2294 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XOC_2294 PF02203 Tar ligand binding domain homologue XOC_2295 PF00672 HAMP domain XOC_2295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XOC_2295 PF02203 Tar ligand binding domain homologue XOC_2297 PF00672 HAMP domain XOC_2297 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XOC_2297 PF02203 Tar ligand binding domain homologue XOC_2298 PF00672 HAMP domain XOC_2298 PF02203 Tar ligand binding domain homologue XOC_2298 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XOC_2300 PF00672 HAMP domain XOC_2300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XOC_2300 PF02203 Tar ligand binding domain homologue XOC_2303 PF01627 Hpt domain XOC_2303 PF09078 CheY binding XOC_2303 PF02895 Signal transducing histidine kinase, homodimeric domain XOC_2303 PF01584 CheW-like domain XOC_2303 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XOC_2304 PF00072 Response regulator receiver domain XOC_2306 PF01584 CheW-like domain XOC_2307 PF13614 AAA domain XOC_2308 PF00691 OmpA family XOC_2308 PF13677 Membrane MotB of proton-channel complex MotA/MotB XOC_2309 PF01618 MotA/TolQ/ExbB proton channel family XOC_2312 PF02777 Iron/manganese superoxide dismutases, C-terminal domain XOC_2312 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain XOC_2314 PF00593 TonB dependent receptor XOC_2314 PF07715 TonB-dependent Receptor Plug Domain XOC_2321 PF01555 DNA methylase XOC_2321 PF18273 Type III R-M EcoP15I C-terminal domain XOC_2322 PF04851 Type III restriction enzyme, res subunit XOC_2322 PF08774 VRR-NUC domain XOC_2326 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XOC_2326 PF07194 P2 response regulator binding domain XOC_2326 PF01627 Hpt domain XOC_2326 PF02895 Signal transducing histidine kinase, homodimeric domain XOC_2326 PF01584 CheW-like domain XOC_2327 PF04344 Chemotaxis phosphatase, CheZ XOC_2328 PF00072 Response regulator receiver domain XOC_2329 PF04545 Sigma-70, region 4 XOC_2329 PF04539 Sigma-70 region 3 XOC_2329 PF04542 Sigma-70 region 2 XOC_2330 PF10609 NUBPL iron-transfer P-loop NTPase XOC_2331 PF00448 SRP54-type protein, GTPase domain XOC_2333 PF00771 FHIPEP family XOC_2334 PF01312 FlhB HrpN YscU SpaS Family XOC_2335 PF03707 Bacterial signalling protein N terminal repeat XOC_2335 PF00563 EAL domain XOC_2335 PF00990 Diguanylate cyclase, GGDEF domain XOC_2336 PF00990 Diguanylate cyclase, GGDEF domain XOC_2336 PF13188 PAS domain XOC_2336 PF03707 Bacterial signalling protein N terminal repeat XOC_2336 PF00563 EAL domain XOC_2339 PF03707 Bacterial signalling protein N terminal repeat XOC_2339 PF00990 Diguanylate cyclase, GGDEF domain XOC_2339 PF00563 EAL domain XOC_2339 PF13188 PAS domain XOC_2340 PF01311 Bacterial export proteins, family 1 XOC_2341 PF01313 Bacterial export proteins, family 3 XOC_2342 PF00813 FliP family XOC_2343 PF04347 Flagellar biosynthesis protein, FliO XOC_2344 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term XOC_2345 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term XOC_2345 PF02154 Flagellar motor switch protein FliM XOC_2349 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XOC_2349 PF18269 T3SS EscN ATPase C-terminal domain XOC_2351 PF14842 FliG N-terminal domain XOC_2351 PF01706 FliG C-terminal domain XOC_2351 PF14841 FliG middle domain XOC_2352 PF01514 Secretory protein of YscJ/FliF family XOC_2352 PF08345 Flagellar M-ring protein C-terminal XOC_2353 PF02049 Flagellar hook-basal body complex protein FliE XOC_2354 PF00534 Glycosyl transferases group 1 XOC_2354 PF00535 Glycosyl transferase family 2 XOC_2362 PF00106 short chain dehydrogenase XOC_2363 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal XOC_2363 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III XOC_2365 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family XOC_2366 PF00158 Sigma-54 interaction domain XOC_2366 PF00072 Response regulator receiver domain XOC_2366 PF02954 Bacterial regulatory protein, Fis family XOC_2367 PF00072 Response regulator receiver domain XOC_2367 PF01339 CheB methylesterase XOC_2368 PF00309 Sigma-54 factor, Activator interacting domain (AID) XOC_2368 PF04963 Sigma-54 factor, core binding domain XOC_2368 PF04552 Sigma-54, DNA binding domain XOC_2369 PF00196 Bacterial regulatory proteins, luxR family XOC_2369 PF00072 Response regulator receiver domain XOC_2372 PF02561 Flagellar protein FliS XOC_2373 PF07195 Flagellar hook-associated protein 2 C-terminus XOC_2373 PF07196 Flagellin hook IN motif XOC_2373 PF02465 Flagellar hook-associated protein 2 N-terminus XOC_2374 PF00669 Bacterial flagellin N-terminal helical region XOC_2374 PF00700 Bacterial flagellin C-terminal helical region XOC_2376 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XOC_2376 PF07196 Flagellin hook IN motif XOC_2377 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase XOC_2377 PF10135 Rod binding protein XOC_2378 PF02119 Flagellar P-ring protein XOC_2379 PF02107 Flagellar L-ring protein XOC_2380 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XOC_2380 PF00460 Flagella basal body rod protein XOC_2381 PF00460 Flagella basal body rod protein XOC_2381 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XOC_2382 PF00460 Flagella basal body rod protein XOC_2382 PF07559 Flagellar basal body protein FlaE XOC_2382 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XOC_2384 PF03963 Flagellar hook capping protein - N-terminal region XOC_2385 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XOC_2385 PF00460 Flagella basal body rod protein XOC_2387 PF01584 CheW-like domain XOC_2387 PF00072 Response regulator receiver domain XOC_2392 PF00512 His Kinase A (phospho-acceptor) domain XOC_2392 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XOC_2393 PF03707 Bacterial signalling protein N terminal repeat XOC_2393 PF00990 Diguanylate cyclase, GGDEF domain XOC_2393 PF00563 EAL domain XOC_2394 PF07730 Histidine kinase XOC_2394 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XOC_2395 PF00563 EAL domain XOC_2395 PF00990 Diguanylate cyclase, GGDEF domain XOC_2395 PF03707 Bacterial signalling protein N terminal repeat XOC_2397 PF05598 Transposase domain (DUF772) XOC_2399 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XOC_2399 PF00672 HAMP domain XOC_2399 PF12729 Four helix bundle sensory module for signal transduction XOC_2400 PF04356 Protein of unknown function (DUF489) XOC_2402 PF00293 NUDIX domain XOC_2404 PF02617 ATP-dependent Clp protease adaptor protein ClpS XOC_2405 PF17871 AAA lid domain XOC_2405 PF02861 Clp amino terminal domain, pathogenicity island component XOC_2405 PF07724 AAA domain (Cdc48 subfamily) XOC_2405 PF10431 C-terminal, D2-small domain, of ClpB protein XOC_2405 PF00004 ATPase family associated with various cellular activities (AAA) XOC_2406 PF01176 Translation initiation factor 1A / IF-1 XOC_2407 PF03588 Leucyl/phenylalanyl-tRNA protein transferase XOC_2411 PF07992 Pyridine nucleotide-disulphide oxidoreductase XOC_2412 PF09397 Ftsk gamma domain XOC_2412 PF13491 4TM region of DNA translocase FtsK/SpoIIIE XOC_2412 PF17854 FtsK alpha domain XOC_2412 PF01580 FtsK/SpoIIIE family XOC_2414 PF03548 Outer membrane lipoprotein carrier protein LolA XOC_2417 PF16193 AAA C-terminal domain XOC_2417 PF12002 MgsA AAA+ ATPase C terminal XOC_2417 PF00004 ATPase family associated with various cellular activities (AAA) XOC_2419 PF02537 CrcB-like protein, Camphor Resistance (CrcB) XOC_2422 PF00654 Voltage gated chloride channel XOC_2423 PF00108 Thiolase, N-terminal domain XOC_2423 PF02803 Thiolase, C-terminal domain XOC_2424 PF00378 Enoyl-CoA hydratase/isomerase XOC_2424 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain XOC_2424 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain XOC_2427 PF00334 Nucleoside diphosphate kinase XOC_2428 PF04055 Radical SAM superfamily XOC_2430 PF13464 Domain of unknown function (DUF4115) XOC_2432 PF13360 PQQ-like domain XOC_2432 PF01011 PQQ enzyme repeat XOC_2433 PF01926 50S ribosome-binding GTPase XOC_2433 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal XOC_2434 PF00994 Probable molybdopterin binding domain XOC_2434 PF03453 MoeA N-terminal region (domain I and II) XOC_2434 PF03454 MoeA C-terminal region (domain IV) XOC_2436 PF00899 ThiF family XOC_2441 PF05598 Transposase domain (DUF772) XOC_2441 PF01609 Transposase DDE domain XOC_2443 PF01609 Transposase DDE domain XOC_2443 PF05598 Transposase domain (DUF772) XOC_2445 PF05598 Transposase domain (DUF772) XOC_2445 PF01609 Transposase DDE domain XOC_2448 PF03453 MoeA N-terminal region (domain I and II) XOC_2448 PF03454 MoeA C-terminal region (domain IV) XOC_2448 PF00994 Probable molybdopterin binding domain XOC_2449 PF12804 MobA-like NTP transferase domain XOC_2454 PF14824 Sirohaem biosynthesis protein central XOC_2454 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases XOC_2454 PF10414 Sirohaem synthase dimerisation region XOC_2457 PF00072 Response regulator receiver domain XOC_2457 PF03861 ANTAR domain XOC_2466 PF00563 EAL domain XOC_2466 PF00990 Diguanylate cyclase, GGDEF domain XOC_2466 PF08447 PAS fold XOC_2466 PF08448 PAS fold XOC_2467 PF12951 Passenger-associated-transport-repeat XOC_2469 PF00196 Bacterial regulatory proteins, luxR family XOC_2469 PF00072 Response regulator receiver domain XOC_2470 PF13426 PAS domain XOC_2470 PF00512 His Kinase A (phospho-acceptor) domain XOC_2470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XOC_2470 PF00072 Response regulator receiver domain XOC_2470 PF08448 PAS fold XOC_2471 PF02321 Outer membrane efflux protein XOC_2472 PF00873 AcrB/AcrD/AcrF family XOC_2473 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XOC_2475 PF00082 Subtilase family XOC_2475 PF03797 Autotransporter beta-domain XOC_2477 PF05598 Transposase domain (DUF772) XOC_2478 PF16671 Actin cross-linking domain XOC_2478 PF04717 Type VI secretion system, phage-baseplate injector XOC_2480 PF03377 TAL effector repeat XOC_2485 PF03377 TAL effector repeat XOC_2491 PF05598 Transposase domain (DUF772) XOC_2494 PF05598 Transposase domain (DUF772) XOC_2494 PF01609 Transposase DDE domain XOC_2495 PF01609 Transposase DDE domain XOC_2495 PF05598 Transposase domain (DUF772) XOC_2496 PF05598 Transposase domain (DUF772) XOC_2496 PF01609 Transposase DDE domain XOC_2500 PF14226 non-haem dioxygenase in morphine synthesis N-terminal XOC_2500 PF03171 2OG-Fe(II) oxygenase superfamily XOC_2507 PF00873 AcrB/AcrD/AcrF family XOC_2508 PF00529 HlyD membrane-fusion protein of T1SS XOC_2508 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XOC_2514 PF01527 Transposase XOC_2516 PF13276 HTH-like domain XOC_2517 PF00872 Transposase, Mutator family XOC_2519 PF00072 Response regulator receiver domain XOC_2519 PF00486 Transcriptional regulatory protein, C terminal XOC_2520 PF00034 Cytochrome c XOC_2520 PF03150 Di-haem cytochrome c peroxidase XOC_2521 PF00512 His Kinase A (phospho-acceptor) domain XOC_2521 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XOC_2522 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XOC_2522 PF03466 LysR substrate binding domain XOC_2525 PF00069 Protein kinase domain XOC_2533 PF04717 Type VI secretion system, phage-baseplate injector XOC_2533 PF16671 Actin cross-linking domain XOC_2535 PF01609 Transposase DDE domain XOC_2535 PF05598 Transposase domain (DUF772) XOC_2536 PF13936 Helix-turn-helix domain XOC_2536 PF00665 Integrase core domain XOC_2537 PF17871 AAA lid domain XOC_2537 PF00004 ATPase family associated with various cellular activities (AAA) XOC_2537 PF07724 AAA domain (Cdc48 subfamily) XOC_2537 PF10431 C-terminal, D2-small domain, of ClpB protein XOC_2542 PF05638 Type VI secretion system effector, Hcp XOC_2545 PF16671 Actin cross-linking domain XOC_2545 PF04717 Type VI secretion system, phage-baseplate injector XOC_2554 PF05598 Transposase domain (DUF772) XOC_2557 PF01527 Transposase XOC_2559 PF01106 NifU-like domain XOC_2560 PF01329 Pterin 4 alpha carbinolamine dehydratase XOC_2562 PF02535 ZIP Zinc transporter XOC_2563 PF11737 Protein of unknown function (DUF3300) XOC_2564 PF00849 RNA pseudouridylate synthase XOC_2564 PF01479 S4 domain XOC_2565 PF00575 S1 RNA binding domain XOC_2565 PF10150 Ribonuclease E/G family XOC_2565 PF12111 Polyribonucleotide phosphorylase C terminal XOC_2566 PF00072 Response regulator receiver domain XOC_2566 PF00196 Bacterial regulatory proteins, luxR family XOC_2569 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XOC_2570 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain XOC_2570 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain XOC_2570 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain XOC_2573 PF01648 4'-phosphopantetheinyl transferase superfamily XOC_2573 PF17837 4'-phosphopantetheinyl transferase N-terminal domain XOC_2574 PF00501 AMP-binding enzyme XOC_2574 PF13193 AMP-binding enzyme C-terminal domain XOC_2574 PF00668 Condensation domain XOC_2574 PF00550 Phosphopantetheine attachment site XOC_2574 PF00975 Thioesterase domain XOC_2575 PF13193 AMP-binding enzyme C-terminal domain XOC_2575 PF00501 AMP-binding enzyme XOC_2575 PF00550 Phosphopantetheine attachment site XOC_2575 PF00668 Condensation domain XOC_2575 PF00975 Thioesterase domain XOC_2578 PF13683 Integrase core domain XOC_2578 PF13276 HTH-like domain XOC_2579 PF00589 Phage integrase family XOC_2579 PF13356 Arm DNA-binding domain XOC_2583 PF01066 CDP-alcohol phosphatidyltransferase XOC_2584 PF02151 UvrB/uvrC motif XOC_2584 PF01541 GIY-YIG catalytic domain XOC_2584 PF08459 UvrC Helix-hairpin-helix N-terminal XOC_2586 PF01451 Low molecular weight phosphotyrosine protein phosphatase XOC_2587 PF02348 Cytidylyltransferase XOC_2588 PF02606 Tetraacyldisaccharide-1-P 4'-kinase XOC_2589 PF00664 ABC transporter transmembrane region XOC_2589 PF00005 ABC transporter XOC_2591 PF01618 MotA/TolQ/ExbB proton channel family XOC_2592 PF00753 Metallo-beta-lactamase superfamily XOC_2592 PF03772 Competence protein XOC_2596 PF00005 ABC transporter XOC_2597 PF02687 FtsX-like permease family XOC_2597 PF12704 MacB-like periplasmic core domain XOC_2599 PF03937 Flavinator of succinate dehydrogenase XOC_2600 PF13085 2Fe-2S iron-sulfur cluster binding domain XOC_2602 PF00890 FAD binding domain XOC_2602 PF02910 Fumarate reductase flavoprotein C-term XOC_2603 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit XOC_2604 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit XOC_2605 PF01571 Aminomethyltransferase folate-binding domain XOC_2606 PF17912 MalK OB fold domain XOC_2606 PF00005 ABC transporter XOC_2607 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain XOC_2607 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain XOC_2608 PF02685 Glucokinase XOC_2609 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase XOC_2610 PF00920 Dehydratase family XOC_2611 PF01081 KDPG and KHG aldolase XOC_2613 PF00665 Integrase core domain XOC_2613 PF13936 Helix-turn-helix domain XOC_2614 PF00873 AcrB/AcrD/AcrF family XOC_2615 PF00873 AcrB/AcrD/AcrF family XOC_2616 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XOC_2618 PF00034 Cytochrome c XOC_2624 PF00589 Phage integrase family XOC_2628 PF01609 Transposase DDE domain XOC_2628 PF05598 Transposase domain (DUF772) XOC_2629 PF05598 Transposase domain (DUF772) XOC_2629 PF01609 Transposase DDE domain XOC_2632 PF05598 Transposase domain (DUF772) XOC_2633 PF05598 Transposase domain (DUF772) XOC_2634 PF00664 ABC transporter transmembrane region XOC_2634 PF03412 Peptidase C39 family XOC_2634 PF00005 ABC transporter XOC_2648 PF00072 Response regulator receiver domain XOC_2648 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XOC_2648 PF00512 His Kinase A (phospho-acceptor) domain XOC_2648 PF09308 LuxQ, periplasmic XOC_2649 PF00575 S1 RNA binding domain XOC_2649 PF09371 Tex-like protein N-terminal domain XOC_2649 PF17674 HHH domain XOC_2649 PF16921 Tex protein YqgF-like domain XOC_2652 PF01266 FAD dependent oxidoreductase XOC_2652 PF00355 Rieske [2Fe-2S] domain XOC_2654 PF00561 alpha/beta hydrolase fold XOC_2656 PF01066 CDP-alcohol phosphatidyltransferase XOC_2660 PF03618 Kinase/pyrophosphorylase XOC_2661 PF00391 PEP-utilising enzyme, mobile domain XOC_2661 PF02896 PEP-utilising enzyme, TIM barrel domain XOC_2661 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain XOC_2662 PF00924 Mechanosensitive ion channel XOC_2662 PF05552 Conserved TM helix XOC_2663 PF00929 Exonuclease XOC_2664 PF14437 MafB19-like deaminase XOC_2665 PF02742 Iron dependent repressor, metal binding and dimerisation domain XOC_2665 PF01325 Iron dependent repressor, N-terminal DNA binding domain XOC_2666 PF01566 Natural resistance-associated macrophage protein XOC_2668 PF00072 Response regulator receiver domain XOC_2668 PF00196 Bacterial regulatory proteins, luxR family XOC_2671 PF03466 LysR substrate binding domain XOC_2671 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XOC_2672 PF03466 LysR substrate binding domain XOC_2672 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XOC_2673 PF03601 Conserved hypothetical protein 698 XOC_2675 PF00106 short chain dehydrogenase XOC_2676 PF03466 LysR substrate binding domain XOC_2676 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XOC_2677 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus XOC_2677 PF00361 Proton-conducting membrane transporter XOC_2677 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus XOC_2678 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) XOC_2679 PF00117 Glutamine amidotransferase class-I XOC_2679 PF00958 GMP synthase C terminal domain XOC_2679 PF02540 NAD synthase XOC_2680 PF00478 IMP dehydrogenase / GMP reductase domain XOC_2680 PF00571 CBS domain XOC_2681 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain XOC_2681 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain XOC_2684 PF00999 Sodium/hydrogen exchanger family XOC_2684 PF02254 TrkA-N domain XOC_2685 PF02254 TrkA-N domain XOC_2685 PF00999 Sodium/hydrogen exchanger family XOC_2687 PF00483 Nucleotidyl transferase XOC_2688 PF02719 Polysaccharide biosynthesis protein XOC_2689 PF00953 Glycosyl transferase family 4 XOC_2690 PF18073 Rubredoxin metal binding domain XOC_2692 PF00216 Bacterial DNA-binding protein XOC_2693 PF00575 S1 RNA binding domain XOC_2694 PF02224 Cytidylate kinase XOC_2697 PF04371 Porphyromonas-type peptidyl-arginine deiminase XOC_2698 PF00795 Carbon-nitrogen hydrolase XOC_2703 PF00528 Binding-protein-dependent transport system inner membrane component XOC_2704 PF00528 Binding-protein-dependent transport system inner membrane component XOC_2708 PF00356 Bacterial regulatory proteins, lacI family XOC_2711 PF03795 YCII-related domain XOC_2712 PF02616 Segregation and condensation protein ScpA XOC_2713 PF04079 Segregation and condensation complex subunit ScpB XOC_2714 PF00849 RNA pseudouridylate synthase XOC_2714 PF01479 S4 domain XOC_2717 PF00795 Carbon-nitrogen hydrolase XOC_2718 PF00155 Aminotransferase class I and II XOC_2719 PF00005 ABC transporter XOC_2720 PF03379 CcmB protein XOC_2721 PF01578 Cytochrome C assembly protein XOC_2723 PF03100 CcmE XOC_2724 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal XOC_2724 PF01578 Cytochrome C assembly protein XOC_2725 PF08534 Redoxin XOC_2726 PF03918 Cytochrome C biogenesis protein XOC_2728 PF00561 alpha/beta hydrolase fold XOC_2731 PF00664 ABC transporter transmembrane region XOC_2731 PF00005 ABC transporter XOC_2732 PF00664 ABC transporter transmembrane region XOC_2732 PF00005 ABC transporter XOC_2733 PF01654 Cytochrome bd terminal oxidase subunit I XOC_2734 PF01654 Cytochrome bd terminal oxidase subunit I XOC_2735 PF02322 Cytochrome bd terminal oxidase subunit II XOC_2737 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain XOC_2737 PF02129 X-Pro dipeptidyl-peptidase (S15 family) XOC_2740 PF00171 Aldehyde dehydrogenase family XOC_2741 PF01472 PUA domain XOC_2741 PF00696 Amino acid kinase family XOC_2744 PF00206 Lyase XOC_2745 PF01118 Semialdehyde dehydrogenase, NAD binding domain XOC_2747 PF00696 Amino acid kinase family XOC_2747 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase XOC_2748 PF07687 Peptidase dimerisation domain XOC_2748 PF01546 Peptidase family M20/M25/M40 XOC_2750 PF00764 Arginosuccinate synthase XOC_2751 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain XOC_2751 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain XOC_2754 PF01406 tRNA synthetases class I (C) catalytic domain XOC_2754 PF09190 DALR domain XOC_2755 PF02657 Fe-S metabolism associated domain XOC_2759 PF01258 Prokaryotic dksA/traR C4-type zinc finger XOC_2760 PF01809 Putative membrane protein insertion efficiency factor XOC_2761 PF01979 Amidohydrolase family XOC_2762 PF01551 Peptidase family M23 XOC_2762 PF08460 Bacterial SH3 domain XOC_2763 PF05985 Ethanolamine ammonia-lyase light chain (EutC) XOC_2767 PF03796 DnaB-like helicase C terminal domain XOC_2767 PF00772 DnaB-like helicase N terminal domain XOC_2769 PF02599 Global regulator protein family XOC_2770 PF01411 tRNA synthetases class II (A) XOC_2770 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain XOC_2770 PF02272 DHHA1 domain XOC_2771 PF02631 RecX family XOC_2772 PF00154 recA bacterial DNA recombination protein XOC_2773 PF00717 Peptidase S24-like XOC_2773 PF01726 LexA DNA binding domain XOC_2774 PF03109 ABC1 family XOC_2776 PF02464 Competence-damaged protein XOC_2777 PF13167 GTP-binding GTPase N-terminal XOC_2777 PF01926 50S ribosome-binding GTPase XOC_2777 PF16360 GTP-binding GTPase Middle Region XOC_2778 PF17209 Hfq protein XOC_2780 PF00809 Pterin binding enzyme XOC_2781 PF01434 Peptidase family M41 XOC_2781 PF06480 FtsH Extracellular XOC_2781 PF17862 AAA+ lid domain XOC_2781 PF00004 ATPase family associated with various cellular activities (AAA) XOC_2782 PF01728 FtsJ-like methyltransferase XOC_2783 PF01985 CRS1 / YhbY (CRM) domain XOC_2784 PF04430 Protein of unknown function (DUF498/DUF598) XOC_2785 PF01551 Peptidase family M23 XOC_2785 PF01476 LysM domain XOC_2786 PF09335 SNARE associated Golgi protein XOC_2788 PF01975 Survival protein SurE XOC_2789 PF01713 Smr domain XOC_2790 PF01142 tRNA pseudouridine synthase D (TruD) XOC_2791 PF02542 YgbB family XOC_2792 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase XOC_2793 PF04977 Septum formation initiator XOC_2794 PF00113 Enolase, C-terminal TIM barrel domain XOC_2794 PF03952 Enolase, N-terminal domain XOC_2796 PF00793 DAHP synthetase I family XOC_2797 PF06418 CTP synthase N-terminus XOC_2797 PF00117 Glutamine amidotransferase class-I XOC_2800 PF00986 DNA gyrase B subunit, carboxyl terminus XOC_2800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XOC_2800 PF00204 DNA gyrase B XOC_2800 PF01751 Toprim domain XOC_2804 PF01384 Phosphate transporter family XOC_2806 PF03471 Transporter associated domain XOC_2806 PF01595 Cyclin M transmembrane N-terminal domain XOC_2806 PF00571 CBS domain XOC_2809 PF00296 Luciferase-like monooxygenase XOC_2811 PF00083 Sugar (and other) transporter XOC_2812 PF00005 ABC transporter XOC_2812 PF00664 ABC transporter transmembrane region XOC_2813 PF00005 ABC transporter XOC_2816 PF13579 Glycosyl transferase 4-like domain XOC_2816 PF00534 Glycosyl transferases group 1 XOC_2820 PF08241 Methyltransferase domain XOC_2823 PF00535 Glycosyl transferase family 2 XOC_2824 PF01943 Polysaccharide biosynthesis protein XOC_2825 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family XOC_2829 PF05523 WxcM-like, C-terminal XOC_2832 PF00034 Cytochrome c XOC_2834 PF04542 Sigma-70 region 2 XOC_2834 PF08281 Sigma-70, region 4 XOC_2836 PF00082 Subtilase family XOC_2837 PF01578 Cytochrome C assembly protein XOC_2838 PF04995 Heme exporter protein D (CcmD) XOC_2839 PF03100 CcmE XOC_2840 PF01578 Cytochrome C assembly protein XOC_2840 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal XOC_2841 PF08534 Redoxin XOC_2842 PF03918 Cytochrome C biogenesis protein XOC_2844 PF13426 PAS domain XOC_2844 PF00072 Response regulator receiver domain XOC_2844 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XOC_2845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XOC_2845 PF13426 PAS domain XOC_2845 PF00072 Response regulator receiver domain XOC_2848 PF05598 Transposase domain (DUF772) XOC_2848 PF01609 Transposase DDE domain XOC_2854 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XOC_2854 PF02203 Tar ligand binding domain homologue XOC_2854 PF00672 HAMP domain XOC_2856 PF13683 Integrase core domain XOC_2856 PF13276 HTH-like domain XOC_2857 PF03377 TAL effector repeat XOC_2859 PF13936 Helix-turn-helix domain XOC_2859 PF00665 Integrase core domain XOC_2860 PF13936 Helix-turn-helix domain XOC_2860 PF00665 Integrase core domain XOC_2861 PF13936 Helix-turn-helix domain XOC_2861 PF00665 Integrase core domain XOC_2865 PF05598 Transposase domain (DUF772) XOC_2865 PF01609 Transposase DDE domain XOC_2870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XOC_2870 PF03466 LysR substrate binding domain XOC_2872 PF02525 Flavodoxin-like fold XOC_2873 PF02403 Seryl-tRNA synthetase N-terminal domain XOC_2873 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) XOC_2874 PF03544 Gram-negative bacterial TonB protein C-terminal XOC_2876 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) XOC_2877 PF00800 Prephenate dehydratase XOC_2877 PF01842 ACT domain XOC_2877 PF01817 Chorismate mutase type II XOC_2878 PF00266 Aminotransferase class-V XOC_2879 PF00174 Oxidoreductase molybdopterin binding domain XOC_2884 PF00392 Bacterial regulatory proteins, gntR family XOC_2884 PF07702 UTRA domain XOC_2886 PF07969 Amidohydrolase family XOC_2887 PF00221 Aromatic amino acid lyase XOC_2889 PF01175 Urocanase Rossmann-like domain XOC_2889 PF17392 Urocanase C-terminal domain XOC_2889 PF17391 Urocanase N-terminal domain XOC_2892 PF03377 TAL effector repeat XOC_2893 PF01527 Transposase XOC_2894 PF13276 HTH-like domain XOC_2894 PF13683 Integrase core domain XOC_2896 PF00271 Helicase conserved C-terminal domain XOC_2896 PF17757 UvrB interaction domain XOC_2896 PF12344 Ultra-violet resistance protein B XOC_2896 PF02151 UvrB/uvrC motif XOC_2896 PF04851 Type III restriction enzyme, res subunit XOC_2898 PF07963 Prokaryotic N-terminal methylation motif XOC_2898 PF00114 Pilin (bacterial filament) XOC_2899 PF05567 Neisseria PilC beta-propeller domain XOC_2903 PF12019 Type II transport protein GspH XOC_2903 PF07963 Prokaryotic N-terminal methylation motif XOC_2904 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases XOC_2904 PF03641 Possible lysine decarboxylase XOC_2904 PF11892 Domain of unknown function (DUF3412) XOC_2905 PF00593 TonB dependent receptor XOC_2906 PF01914 MarC family integral membrane protein XOC_2908 PF00462 Glutaredoxin XOC_2909 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain XOC_2909 PF02777 Iron/manganese superoxide dismutases, C-terminal domain XOC_2910 PF02222 ATP-grasp domain XOC_2910 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain XOC_2911 PF00731 AIR carboxylase XOC_2913 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain XOC_2913 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain XOC_2915 PF03725 3' exoribonuclease family, domain 2 XOC_2915 PF01138 3' exoribonuclease family, domain 1 XOC_2915 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain XOC_2915 PF00013 KH domain XOC_2915 PF00575 S1 RNA binding domain XOC_2917 PF00312 Ribosomal protein S15 XOC_2918 PF09157 Pseudouridine synthase II TruB, C-terminal XOC_2918 PF16198 tRNA pseudouridylate synthase B C-terminal domain XOC_2918 PF01509 TruB family pseudouridylate synthase (N terminal domain) XOC_2919 PF02033 Ribosome-binding factor A XOC_2920 PF04760 Translation initiation factor IF-2, N-terminal region XOC_2920 PF08364 Bacterial translation initiation factor IF-2 associated region XOC_2920 PF11987 Translation-initiation factor 2 XOC_2920 PF00009 Elongation factor Tu GTP binding domain XOC_2921 PF08529 NusA N-terminal domain XOC_2921 PF13184 NusA-like KH domain XOC_2921 PF00575 S1 RNA binding domain XOC_2922 PF02576 RimP N-terminal domain XOC_2922 PF17384 RimP C-terminal SH3 domain XOC_2924 PF00361 Proton-conducting membrane transporter XOC_2925 PF00361 Proton-conducting membrane transporter XOC_2925 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus XOC_2926 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus XOC_2926 PF00361 Proton-conducting membrane transporter XOC_2927 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L XOC_2928 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 XOC_2929 PF12838 4Fe-4S dicluster domain XOC_2930 PF00146 NADH dehydrogenase XOC_2931 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region XOC_2931 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal XOC_2931 PF00384 Molybdopterin oxidoreductase XOC_2932 PF10531 SLBB domain XOC_2932 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit XOC_2932 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region XOC_2934 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit XOC_2935 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit XOC_2936 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit XOC_2937 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 XOC_2939 PF03840 Preprotein translocase SecG subunit XOC_2940 PF00121 Triosephosphate isomerase XOC_2944 PF03707 Bacterial signalling protein N terminal repeat XOC_2944 PF00990 Diguanylate cyclase, GGDEF domain XOC_2944 PF00563 EAL domain XOC_2948 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II XOC_2948 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I XOC_2948 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III XOC_2948 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain XOC_2949 PF17848 Acetyl-coA carboxylase zinc finger domain XOC_2949 PF01039 Carboxyl transferase domain XOC_2950 PF00290 Tryptophan synthase alpha chain XOC_2952 PF00291 Pyridoxal-phosphate dependent enzyme XOC_2953 PF03466 LysR substrate binding domain XOC_2953 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XOC_2954 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase XOC_2955 PF01416 tRNA pseudouridine synthase XOC_2959 PF02774 Semialdehyde dehydrogenase, dimerisation domain XOC_2959 PF01118 Semialdehyde dehydrogenase, NAD binding domain XOC_2960 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain XOC_2960 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain XOC_2961 PF01264 Chorismate synthase XOC_2962 PF05175 Methyltransferase small domain XOC_2963 PF02630 SCO1/SenC XOC_2964 PF02666 Phosphatidylserine decarboxylase XOC_2967 PF05872 Bacterial protein of unknown function (DUF853) XOC_2970 PF13683 Integrase core domain XOC_2970 PF13276 HTH-like domain XOC_2971 PF01527 Transposase XOC_2972 PF01527 Transposase XOC_2975 PF01272 Transcription elongation factor, GreA/GreB, C-term XOC_2975 PF03449 Transcription elongation factor, N-terminal XOC_2977 PF04055 Radical SAM superfamily XOC_2977 PF18693 TRAM domain XOC_2977 PF00919 Uncharacterized protein family UPF0004 XOC_2978 PF01738 Dienelactone hydrolase family XOC_2982 PF00692 dUTPase XOC_2983 PF10609 NUBPL iron-transfer P-loop NTPase XOC_2984 PF13340 Putative transposase of IS4/5 family (DUF4096) XOC_2986 PF00990 Diguanylate cyclase, GGDEF domain XOC_2989 PF08448 PAS fold XOC_2989 PF00990 Diguanylate cyclase, GGDEF domain XOC_2990 PF02321 Outer membrane efflux protein XOC_2992 PF05598 Transposase domain (DUF772) XOC_2992 PF01609 Transposase DDE domain XOC_2993 PF00691 OmpA family XOC_2993 PF05736 OprF membrane domain XOC_2996 PF00875 DNA photolyase XOC_2996 PF03441 FAD binding domain of DNA photolyase XOC_2997 PF03796 DnaB-like helicase C terminal domain XOC_2997 PF00772 DnaB-like helicase N terminal domain XOC_2998 PF03358 NADPH-dependent FMN reductase XOC_2999 PF00733 Asparagine synthase XOC_2999 PF13537 Glutamine amidotransferase domain XOC_3000 PF02798 Glutathione S-transferase, N-terminal domain XOC_3000 PF00043 Glutathione S-transferase, C-terminal domain XOC_3003 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XOC_3003 PF02770 Acyl-CoA dehydrogenase, middle domain XOC_3003 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XOC_3007 PF01026 TatD related DNase XOC_3008 PF00899 ThiF family XOC_3011 PF00313 'Cold-shock' DNA-binding domain XOC_3017 PF02253 Phospholipase A1 XOC_3019 PF05681 Fumarate hydratase (Fumerase) XOC_3019 PF05683 Fumarase C-terminus XOC_3020 PF00005 ABC transporter XOC_3021 PF00175 Oxidoreductase NAD-binding domain XOC_3021 PF00970 Oxidoreductase FAD-binding domain XOC_3022 PF00255 Glutathione peroxidase XOC_3024 PF01432 Peptidase family M3 XOC_3026 PF00082 Subtilase family XOC_3029 PF08281 Sigma-70, region 4 XOC_3029 PF04542 Sigma-70 region 2 XOC_3030 PF12802 MarR family XOC_3037 PF00854 POT family XOC_3039 PF14310 Fibronectin type III-like domain XOC_3039 PF00933 Glycosyl hydrolase family 3 N terminal domain XOC_3039 PF01915 Glycosyl hydrolase family 3 C-terminal domain XOC_3042 PF00144 Beta-lactamase XOC_3043 PF07690 Major Facilitator Superfamily XOC_3044 PF00529 HlyD membrane-fusion protein of T1SS XOC_3044 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XOC_3045 PF02321 Outer membrane efflux protein XOC_3048 PF00521 DNA gyrase/topoisomerase IV, subunit A XOC_3048 PF03989 DNA gyrase C-terminal domain, beta-propeller XOC_3049 PF00210 Ferritin-like domain XOC_3050 PF01804 Penicillin amidase XOC_3051 PF00593 TonB dependent receptor XOC_3051 PF07715 TonB-dependent Receptor Plug Domain XOC_3054 PF13537 Glutamine amidotransferase domain XOC_3054 PF00733 Asparagine synthase XOC_3055 PF01546 Peptidase family M20/M25/M40 XOC_3055 PF07687 Peptidase dimerisation domain XOC_3057 PF03960 ArsC family XOC_3059 PF14602 Hexapeptide repeat of succinyl-transferase XOC_3059 PF00132 Bacterial transferase hexapeptide (six repeats) XOC_3059 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal XOC_3060 PF08335 GlnD PII-uridylyltransferase XOC_3060 PF01966 HD domain XOC_3060 PF01909 Nucleotidyltransferase domain XOC_3061 PF00557 Metallopeptidase family M24 XOC_3068 PF00318 Ribosomal protein S2 XOC_3070 PF00889 Elongation factor TS XOC_3071 PF00990 Diguanylate cyclase, GGDEF domain XOC_3071 PF00072 Response regulator receiver domain XOC_3072 PF00696 Amino acid kinase family XOC_3073 PF01765 Ribosome recycling factor XOC_3074 PF01255 Putative undecaprenyl diphosphate synthase XOC_3076 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain XOC_3076 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase XOC_3076 PF13288 DXP reductoisomerase C-terminal domain XOC_3077 PF02163 Peptidase family M50 XOC_3077 PF17820 PDZ domain XOC_3078 PF07244 Surface antigen variable number repeat XOC_3078 PF01103 Surface antigen XOC_3079 PF05598 Transposase domain (DUF772) XOC_3079 PF01609 Transposase DDE domain XOC_3080 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD XOC_3080 PF00132 Bacterial transferase hexapeptide (six repeats) XOC_3081 PF07977 FabA-like domain XOC_3082 PF00132 Bacterial transferase hexapeptide (six repeats) XOC_3082 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 XOC_3083 PF02684 Lipid-A-disaccharide synthetase XOC_3084 PF01351 Ribonuclease HII XOC_3085 PF01336 OB-fold nucleic acid binding domain XOC_3085 PF14579 Helix-hairpin-helix motif XOC_3085 PF02811 PHP domain XOC_3085 PF17657 Bacterial DNA polymerase III alpha subunit finger domain XOC_3085 PF07733 Bacterial DNA polymerase III alpha NTPase domain XOC_3086 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit XOC_3089 PF05598 Transposase domain (DUF772) XOC_3095 PF03551 Transcriptional regulator PadR-like family XOC_3097 PF05598 Transposase domain (DUF772) XOC_3101 PF02592 Putative vitamin uptake transporter XOC_3103 PF02574 Homocysteine S-methyltransferase XOC_3104 PF00324 Amino acid permease XOC_3106 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XOC_3108 PF01588 Putative tRNA binding domain XOC_3108 PF09334 tRNA synthetases class I (M) XOC_3110 PF04060 Putative Fe-S cluster XOC_3114 PF04542 Sigma-70 region 2 XOC_3114 PF04545 Sigma-70, region 4 XOC_3123 PF01042 Endoribonuclease L-PSP XOC_3126 PF09924 Uncharacterised conserved protein (DUF2156) XOC_3126 PF03706 Lysylphosphatidylglycerol synthase TM region XOC_3132 PF07690 Major Facilitator Superfamily XOC_3133 PF00724 NADH:flavin oxidoreductase / NADH oxidase family XOC_3139 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XOC_3148 PF01258 Prokaryotic dksA/traR C4-type zinc finger XOC_3151 PF07043 Protein of unknown function (DUF1328) XOC_3152 PF01863 Protein of unknown function DUF45 XOC_3153 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase XOC_3153 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain XOC_3154 PF00082 Subtilase family XOC_3154 PF03797 Autotransporter beta-domain XOC_3154 PF12951 Passenger-associated-transport-repeat XOC_3155 PF00108 Thiolase, N-terminal domain XOC_3155 PF02803 Thiolase, C-terminal domain XOC_3158 PF00990 Diguanylate cyclase, GGDEF domain XOC_3161 PF01068 ATP dependent DNA ligase domain XOC_3161 PF04675 DNA ligase N terminus XOC_3161 PF04679 ATP dependent DNA ligase C terminal region XOC_3163 PF04675 DNA ligase N terminus XOC_3163 PF04679 ATP dependent DNA ligase C terminal region XOC_3163 PF01068 ATP dependent DNA ligase domain XOC_3164 PF08494 DEAD/H associated XOC_3164 PF00271 Helicase conserved C-terminal domain XOC_3164 PF00270 DEAD/DEAH box helicase XOC_3167 PF01494 FAD binding domain XOC_3168 PF01494 FAD binding domain XOC_3169 PF00313 'Cold-shock' DNA-binding domain XOC_3170 PF01048 Phosphorylase superfamily XOC_3172 PF00933 Glycosyl hydrolase family 3 N terminal domain XOC_3173 PF04244 Deoxyribodipyrimidine photo-lyase-related protein XOC_3174 PF01593 Flavin containing amine oxidoreductase XOC_3175 PF01323 DSBA-like thioredoxin domain XOC_3177 PF05958 tRNA (Uracil-5-)-methyltransferase XOC_3180 PF02565 Recombination protein O C terminal XOC_3180 PF11967 Recombination protein O N terminal XOC_3181 PF01926 50S ribosome-binding GTPase XOC_3181 PF07650 KH domain XOC_3182 PF00035 Double-stranded RNA binding motif XOC_3182 PF14622 Ribonuclease-III-like XOC_3184 PF10502 Signal peptidase, peptidase S26 XOC_3185 PF00009 Elongation factor Tu GTP binding domain XOC_3185 PF03144 Elongation factor Tu domain 2 XOC_3185 PF00679 Elongation factor G C-terminus XOC_3185 PF06421 GTP-binding protein LepA C-terminus XOC_3186 PF13180 PDZ domain XOC_3188 PF04542 Sigma-70 region 2 XOC_3188 PF08281 Sigma-70, region 4 XOC_3189 PF00378 Enoyl-CoA hydratase/isomerase XOC_3189 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain XOC_3189 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain XOC_3190 PF01545 Cation efflux family XOC_3192 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase XOC_3192 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase XOC_3193 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain XOC_3193 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain XOC_3193 PF00378 Enoyl-CoA hydratase/isomerase XOC_3194 PF00378 Enoyl-CoA hydratase/isomerase XOC_3195 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XOC_3195 PF02770 Acyl-CoA dehydrogenase, middle domain XOC_3195 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XOC_3196 PF00171 Aldehyde dehydrogenase family XOC_3197 PF01381 Helix-turn-helix XOC_3197 PF09856 Predicted transcriptional regulator (DUF2083) XOC_3197 PF06114 IrrE N-terminal-like domain XOC_3201 PF07745 Glycosyl hydrolase family 53 XOC_3206 PF01627 Hpt domain XOC_3206 PF00072 Response regulator receiver domain XOC_3206 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XOC_3206 PF00672 HAMP domain XOC_3206 PF17149 Periplasmic sensor domain found in signal transduction proteins XOC_3206 PF00512 His Kinase A (phospho-acceptor) domain XOC_3207 PF00072 Response regulator receiver domain XOC_3207 PF00672 HAMP domain XOC_3207 PF01627 Hpt domain XOC_3207 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XOC_3207 PF17149 Periplasmic sensor domain found in signal transduction proteins XOC_3207 PF00512 His Kinase A (phospho-acceptor) domain XOC_3208 PF00072 Response regulator receiver domain XOC_3208 PF09308 LuxQ, periplasmic XOC_3208 PF00512 His Kinase A (phospho-acceptor) domain XOC_3208 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XOC_3209 PF00672 HAMP domain XOC_3209 PF17149 Periplasmic sensor domain found in signal transduction proteins XOC_3209 PF00072 Response regulator receiver domain XOC_3209 PF01627 Hpt domain XOC_3209 PF00512 His Kinase A (phospho-acceptor) domain XOC_3209 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XOC_3210 PF04264 YceI-like domain XOC_3215 PF03315 Serine dehydratase beta chain XOC_3215 PF03313 Serine dehydratase alpha chain XOC_3216 PF03447 Homoserine dehydrogenase, NAD binding domain XOC_3216 PF00742 Homoserine dehydrogenase XOC_3216 PF00696 Amino acid kinase family XOC_3218 PF01053 Cys/Met metabolism PLP-dependent enzyme XOC_3219 PF00561 alpha/beta hydrolase fold XOC_3220 PF01551 Peptidase family M23 XOC_3220 PF08525 Opacity-associated protein A N-terminal motif XOC_3220 PF01476 LysM domain XOC_3221 PF00009 Elongation factor Tu GTP binding domain XOC_3221 PF16658 Class II release factor RF3, C-terminal domain XOC_3222 PF03006 Haemolysin-III related XOC_3225 PF05170 AsmA family XOC_3226 PF00571 CBS domain XOC_3226 PF00478 IMP dehydrogenase / GMP reductase domain XOC_3227 PF00535 Glycosyl transferase family 2 XOC_3228 PF00912 Transglycosylase XOC_3230 PF01430 Hsp33 protein XOC_3232 PF07715 TonB-dependent Receptor Plug Domain XOC_3232 PF00593 TonB dependent receptor XOC_3233 PF00440 Bacterial regulatory proteins, tetR family XOC_3235 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XOC_3235 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XOC_3235 PF09317 Domain of unknown function (DUF1974) XOC_3245 PF01597 Glycine cleavage H-protein XOC_3246 PF08669 Glycine cleavage T-protein C-terminal barrel domain XOC_3246 PF01571 Aminomethyltransferase folate-binding domain XOC_3248 PF01145 SPFH domain / Band 7 family XOC_3248 PF16200 C-terminal region of band_7 XOC_3249 PF02694 Uncharacterised BCR, YnfA/UPF0060 family XOC_3250 PF03819 MazG nucleotide pyrophosphohydrolase domain XOC_3251 PF00459 Inositol monophosphatase family XOC_3252 PF00293 NUDIX domain XOC_3253 PF00202 Aminotransferase class-III XOC_3254 PF04452 RNA methyltransferase XOC_3255 PF02685 Glucokinase XOC_3258 PF00704 Glycosyl hydrolases family 18 XOC_3258 PF01476 LysM domain XOC_3259 PF02838 Glycosyl hydrolase family 20, domain 2 XOC_3259 PF07691 PA14 domain XOC_3259 PF00728 Glycosyl hydrolase family 20, catalytic domain XOC_3261 PF07691 PA14 domain XOC_3261 PF14310 Fibronectin type III-like domain XOC_3261 PF00933 Glycosyl hydrolase family 3 N terminal domain XOC_3261 PF01915 Glycosyl hydrolase family 3 C-terminal domain XOC_3262 PF03412 Peptidase C39 family XOC_3262 PF00005 ABC transporter XOC_3262 PF00664 ABC transporter transmembrane region XOC_3271 PF17678 Glycosyl hydrolase family 92 N-terminal domain XOC_3271 PF07971 Glycosyl hydrolase family 92 XOC_3273 PF01301 Glycosyl hydrolases family 35 XOC_3280 PF03932 CutC family XOC_3281 PF01112 Asparaginase XOC_3283 PF12450 von Willebrand factor XOC_3283 PF12034 Domain of unknown function (DUF3520) XOC_3283 PF00092 von Willebrand factor type A domain XOC_3284 PF12450 von Willebrand factor XOC_3284 PF00092 von Willebrand factor type A domain XOC_3284 PF12034 Domain of unknown function (DUF3520) XOC_3290 PF04717 Type VI secretion system, phage-baseplate injector XOC_3290 PF16671 Actin cross-linking domain XOC_3299 PF13302 Acetyltransferase (GNAT) domain XOC_3303 PF01627 Hpt domain XOC_3303 PF00072 Response regulator receiver domain XOC_3303 PF01584 CheW-like domain XOC_3303 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XOC_3304 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XOC_3304 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term XOC_3305 PF01584 CheW-like domain XOC_3306 PF00072 Response regulator receiver domain XOC_3307 PF00072 Response regulator receiver domain XOC_3308 PF02951 Prokaryotic glutathione synthetase, N-terminal domain XOC_3308 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain XOC_3310 PF03747 ADP-ribosylglycohydrolase XOC_3311 PF00814 Glycoprotease family XOC_3312 PF04851 Type III restriction enzyme, res subunit XOC_3312 PF13307 Helicase C-terminal domain XOC_3314 PF14814 Bifunctional transglycosylase second domain XOC_3314 PF00905 Penicillin binding protein transpeptidase domain XOC_3314 PF00912 Transglycosylase XOC_3315 PF00535 Glycosyl transferase family 2 XOC_3317 PF04607 Region found in RelA / SpoT proteins XOC_3317 PF02824 TGS domain XOC_3317 PF13291 ACT domain XOC_3317a PF08042 PqqA family XOC_3318 PF12706 Beta-lactamase superfamily domain XOC_3319 PF03070 TENA/THI-4/PQQC family XOC_3320 PF05402 Coenzyme PQQ synthesis protein D (PqqD) XOC_3321 PF13186 Iron-sulfur cluster-binding domain XOC_3321 PF04055 Radical SAM superfamily XOC_3327 PF02685 Glucokinase XOC_3329 PF00270 DEAD/DEAH box helicase XOC_3329 PF04408 Helicase associated domain (HA2) XOC_3329 PF11898 Domain of unknown function (DUF3418) XOC_3329 PF00271 Helicase conserved C-terminal domain XOC_3329 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold XOC_3330 PF00210 Ferritin-like domain XOC_3331 PF16124 RecQ zinc-binding XOC_3331 PF00570 HRDC domain XOC_3331 PF00271 Helicase conserved C-terminal domain XOC_3331 PF00270 DEAD/DEAH box helicase XOC_3331 PF09382 RQC domain XOC_3336 PF00849 RNA pseudouridylate synthase XOC_3336 PF01479 S4 domain XOC_3338 PF00672 HAMP domain XOC_3338 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XOC_3338 PF02203 Tar ligand binding domain homologue XOC_3340 PF01810 LysE type translocator XOC_3346 PF06508 Queuosine biosynthesis protein QueC XOC_3348 PF04055 Radical SAM superfamily XOC_3350 PF00691 OmpA family XOC_3351 PF07676 WD40-like Beta Propeller Repeat XOC_3351 PF04052 TolB amino-terminal domain XOC_3353 PF02472 Biopolymer transport protein ExbD/TolR XOC_3354 PF01618 MotA/TolQ/ExbB proton channel family XOC_3355 PF03061 Thioesterase superfamily XOC_3356 PF17864 RuvB AAA lid domain XOC_3356 PF05496 Holliday junction DNA helicase RuvB P-loop domain XOC_3356 PF05491 RuvB C-terminal winged helix domain XOC_3357 PF02705 K+ potassium transporter XOC_3358 PF01330 RuvA N terminal domain XOC_3358 PF07499 RuvA, C-terminal domain XOC_3359 PF02075 Crossover junction endodeoxyribonuclease RuvC XOC_3360 PF01709 Transcriptional regulator XOC_3364 PF00152 tRNA synthetases class II (D, K and N) XOC_3364 PF01336 OB-fold nucleic acid binding domain XOC_3364 PF02938 GAD domain XOC_3368 PF07690 Major Facilitator Superfamily XOC_3369 PF04185 Phosphoesterase family XOC_3369 PF05506 Domain of unknown function (DUF756) XOC_3371 PF13472 GDSL-like Lipase/Acylhydrolase family XOC_3371 PF07859 alpha/beta hydrolase fold XOC_3373 PF03466 LysR substrate binding domain XOC_3373 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XOC_3375 PF12848 ABC transporter XOC_3375 PF00005 ABC transporter XOC_3376 PF07715 TonB-dependent Receptor Plug Domain XOC_3376 PF00593 TonB dependent receptor XOC_3378 PF07715 TonB-dependent Receptor Plug Domain XOC_3378 PF00593 TonB dependent receptor XOC_3379 PF07715 TonB-dependent Receptor Plug Domain XOC_3379 PF00593 TonB dependent receptor XOC_3383 PF02254 TrkA-N domain XOC_3383 PF00999 Sodium/hydrogen exchanger family XOC_3384 PF13276 HTH-like domain XOC_3384 PF13683 Integrase core domain XOC_3386 PF07715 TonB-dependent Receptor Plug Domain XOC_3386 PF07660 Secretin and TonB N terminus short domain XOC_3386 PF00593 TonB dependent receptor XOC_3388 PF04183 IucA / IucC family XOC_3388 PF06276 Ferric iron reductase FhuF-like transporter XOC_3389 PF07690 Major Facilitator Superfamily XOC_3391 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain XOC_3391 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain XOC_3392 PF02654 Cobalamin-5-phosphate synthase XOC_3394 PF02277 Phosphoribosyltransferase XOC_3395 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase XOC_3396 PF00155 Aminotransferase class I and II XOC_3397 PF12557 Cob(I)alamin adenosyltransferase N terminal XOC_3397 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP XOC_3401 PF00593 TonB dependent receptor XOC_3401 PF07715 TonB-dependent Receptor Plug Domain XOC_3402 PF13276 HTH-like domain XOC_3402 PF13683 Integrase core domain XOC_3403 PF01527 Transposase XOC_3404 PF02861 Clp amino terminal domain, pathogenicity island component XOC_3404 PF10431 C-terminal, D2-small domain, of ClpB protein XOC_3404 PF07724 AAA domain (Cdc48 subfamily) XOC_3404 PF00004 ATPase family associated with various cellular activities (AAA) XOC_3404 PF17871 AAA lid domain XOC_3405 PF01541 GIY-YIG catalytic domain XOC_3407 PF00488 MutS domain V XOC_3407 PF05190 MutS family domain IV XOC_3407 PF05192 MutS domain III XOC_3407 PF05188 MutS domain II XOC_3407 PF01624 MutS domain I XOC_3410 PF00141 Peroxidase XOC_3411 PF01479 S4 domain XOC_3412 PF00665 Integrase core domain XOC_3412 PF13936 Helix-turn-helix domain XOC_3413 PF01554 MatE XOC_3415 PF01245 Ribosomal protein L19 XOC_3416 PF01746 tRNA (Guanine-1)-methyltransferase XOC_3417 PF01782 RimM N-terminal domain XOC_3417 PF05239 PRC-barrel domain XOC_3418 PF00886 Ribosomal protein S16 XOC_3420 PF03060 Nitronate monooxygenase XOC_3422 PF00448 SRP54-type protein, GTPase domain XOC_3422 PF02978 Signal peptide binding domain XOC_3422 PF02881 SRP54-type protein, helical bundle domain XOC_3424 PF01578 Cytochrome C assembly protein XOC_3425 PF01263 Aldose 1-epimerase XOC_3426 PF06964 Alpha-L-arabinofuranosidase C-terminal domain XOC_3428 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain XOC_3428 PF04616 Glycosyl hydrolases family 43 XOC_3430 PF13188 PAS domain XOC_3430 PF08448 PAS fold XOC_3430 PF00072 Response regulator receiver domain XOC_3430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XOC_3430 PF00512 His Kinase A (phospho-acceptor) domain XOC_3431 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XOC_3431 PF00672 HAMP domain XOC_3431 PF17149 Periplasmic sensor domain found in signal transduction proteins XOC_3431 PF01627 Hpt domain XOC_3431 PF00072 Response regulator receiver domain XOC_3431 PF00512 His Kinase A (phospho-acceptor) domain XOC_3433 PF13581 Histidine kinase-like ATPase domain XOC_3434 PF01740 STAS domain XOC_3435 PF01740 STAS domain XOC_3435 PF08678 Rsbr N terminal XOC_3438 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XOC_3438 PF00183 Hsp90 protein XOC_3439 PF12833 Helix-turn-helix domain XOC_3444 PF18073 Rubredoxin metal binding domain XOC_3445 PF01527 Transposase XOC_3448 PF13276 HTH-like domain XOC_3448 PF13683 Integrase core domain XOC_3452 PF04717 Type VI secretion system, phage-baseplate injector XOC_3454 PF03626 Prokaryotic Cytochrome C oxidase subunit IV XOC_3455 PF00510 Cytochrome c oxidase subunit III XOC_3456 PF00115 Cytochrome C and Quinol oxidase polypeptide I XOC_3457 PF00116 Cytochrome C oxidase subunit II, periplasmic domain XOC_3457 PF06481 COX Aromatic Rich Motif XOC_3460 PF02401 LytB protein XOC_3461 PF01252 Signal peptidase (SPase) II XOC_3462 PF06827 Zinc finger found in FPG and IleRS XOC_3462 PF00133 tRNA synthetases class I (I, L, M and V) XOC_3462 PF08264 Anticodon-binding domain of tRNA XOC_3463 PF06574 FAD synthetase XOC_3463 PF01687 Riboflavin kinase XOC_3464 PF03023 Lipid II flippase MurJ XOC_3465 PF01649 Ribosomal protein S20 XOC_3466 PF01926 50S ribosome-binding GTPase XOC_3466 PF01018 GTP1/OBG XOC_3467 PF01016 Ribosomal L27 protein XOC_3468 PF00829 Ribosomal prokaryotic L21 protein XOC_3469 PF17760 UvrA interaction domain XOC_3469 PF00005 ABC transporter XOC_3469 PF17755 UvrA DNA-binding domain XOC_3472 PF00378 Enoyl-CoA hydratase/isomerase XOC_3475 PF04542 Sigma-70 region 2 XOC_3475 PF08281 Sigma-70, region 4 XOC_3478 PF04376 Arginine-tRNA-protein transferase, N terminus XOC_3478 PF04377 Arginine-tRNA-protein transferase, C terminus XOC_3481 PF13340 Putative transposase of IS4/5 family (DUF4096) XOC_3486 PF00593 TonB dependent receptor XOC_3486 PF07715 TonB-dependent Receptor Plug Domain XOC_3487 PF02358 Trehalose-phosphatase XOC_3488 PF00723 Glycosyl hydrolases family 15 XOC_3489 PF00982 Glycosyltransferase family 20 XOC_3491 PF01011 PQQ enzyme repeat XOC_3493 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XOC_3493 PF02203 Tar ligand binding domain homologue XOC_3493 PF00672 HAMP domain XOC_3494 PF04134 Protein of unknown function, DUF393 XOC_3498 PF00849 RNA pseudouridylate synthase XOC_3499 PF13525 Outer membrane lipoprotein XOC_3501 PF02540 NAD synthase XOC_3501 PF00795 Carbon-nitrogen hydrolase XOC_3503 PF00549 CoA-ligase XOC_3503 PF02629 CoA binding domain XOC_3504 PF00549 CoA-ligase XOC_3504 PF08442 ATP-grasp domain XOC_3505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XOC_3505 PF00512 His Kinase A (phospho-acceptor) domain XOC_3506 PF02954 Bacterial regulatory protein, Fis family XOC_3506 PF00072 Response regulator receiver domain XOC_3506 PF00158 Sigma-54 interaction domain XOC_3507 PF17841 BID domain of Bartonella effector protein (Bep) XOC_3507 PF02661 Fic/DOC family XOC_3508 PF00437 Type II/IV secretion system protein XOC_3508 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain XOC_3511 PF08019 Phosphoethanolamine transferase EptA/EptB XOC_3511 PF00884 Sulfatase XOC_3512 PF00114 Pilin (bacterial filament) XOC_3512 PF07963 Prokaryotic N-terminal methylation motif XOC_3513 PF00482 Type II secretion system (T2SS), protein F XOC_3514 PF06750 Bacterial Peptidase A24 N-terminal domain XOC_3514 PF01478 Type IV leader peptidase family XOC_3515 PF01121 Dephospho-CoA kinase XOC_3516 PF05598 Transposase domain (DUF772) XOC_3516 PF01609 Transposase DDE domain XOC_3517 PF03527 RHS protein XOC_3518 PF05598 Transposase domain (DUF772) XOC_3519 PF05598 Transposase domain (DUF772) XOC_3520 PF05598 Transposase domain (DUF772) XOC_3522 PF00512 His Kinase A (phospho-acceptor) domain XOC_3522 PF11808 Phosphate regulon sensor protein PhoR XOC_3522 PF00989 PAS fold XOC_3522 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XOC_3523 PF00486 Transcriptional regulatory protein, C terminal XOC_3523 PF00072 Response regulator receiver domain XOC_3525 PF08443 RimK-like ATP-grasp domain XOC_3525 PF18030 RimK PreATP-grasp domain XOC_3526 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) XOC_3526 PF00128 Alpha amylase, catalytic domain XOC_3532 PF01609 Transposase DDE domain XOC_3532 PF05598 Transposase domain (DUF772) XOC_3538 PF16671 Actin cross-linking domain XOC_3538 PF04717 Type VI secretion system, phage-baseplate injector XOC_3543 PF03797 Autotransporter beta-domain XOC_3543 PF00657 GDSL-like Lipase/Acylhydrolase XOC_3545 PF05690 Thiazole biosynthesis protein ThiG XOC_3546 PF02390 Putative methyltransferase XOC_3547 PF02080 TrkA-C domain XOC_3547 PF03600 Citrate transporter XOC_3551 PF01557 Fumarylacetoacetate (FAA) hydrolase family XOC_3552 PF01741 Large-conductance mechanosensitive channel, MscL XOC_3553 PF13276 HTH-like domain XOC_3553 PF13683 Integrase core domain XOC_3554 PF00872 Transposase, Mutator family XOC_3555 PF01527 Transposase XOC_3556 PF00135 Carboxylesterase family XOC_3557 PF00588 SpoU rRNA Methylase family XOC_3557 PF08032 RNA 2'-O ribose methyltransferase substrate binding XOC_3565 PF11838 ERAP1-like C-terminal domain XOC_3565 PF01433 Peptidase family M1 domain XOC_3566 PF00873 AcrB/AcrD/AcrF family XOC_3567 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XOC_3567 PF00529 HlyD membrane-fusion protein of T1SS XOC_3568 PF00009 Elongation factor Tu GTP binding domain XOC_3569 PF01507 Phosphoadenosine phosphosulfate reductase family XOC_3570 PF00258 Flavodoxin XOC_3570 PF00667 FAD binding domain XOC_3570 PF00175 Oxidoreductase NAD-binding domain XOC_3571 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain XOC_3571 PF01077 Nitrite and sulphite reductase 4Fe-4S domain XOC_3572 PF01507 Phosphoadenosine phosphosulfate reductase family XOC_3576 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XOC_3576 PF00072 Response regulator receiver domain XOC_3576 PF01627 Hpt domain XOC_3576 PF00512 His Kinase A (phospho-acceptor) domain XOC_3576 PF00672 HAMP domain XOC_3579 PF03466 LysR substrate binding domain XOC_3579 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XOC_3580 PF10414 Sirohaem synthase dimerisation region XOC_3580 PF14824 Sirohaem biosynthesis protein central XOC_3580 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases XOC_3581 PF00291 Pyridoxal-phosphate dependent enzyme XOC_3584 PF01661 Macro domain XOC_3585 PF00274 Fructose-bisphosphate aldolase class-I XOC_3587 PF02887 Pyruvate kinase, alpha/beta domain XOC_3587 PF00224 Pyruvate kinase, barrel domain XOC_3589 PF00162 Phosphoglycerate kinase XOC_3592 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain XOC_3592 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain XOC_3596 PF04273 Putative phosphatase (DUF442) XOC_3596 PF00753 Metallo-beta-lactamase superfamily XOC_3598 PF00528 Binding-protein-dependent transport system inner membrane component XOC_3599 PF03459 TOBE domain XOC_3599 PF00005 ABC transporter XOC_3605 PF00072 Response regulator receiver domain XOC_3605 PF00486 Transcriptional regulatory protein, C terminal XOC_3609 PF00501 AMP-binding enzyme XOC_3617 PF05598 Transposase domain (DUF772) XOC_3619 PF03734 L,D-transpeptidase catalytic domain XOC_3619 PF01476 LysM domain XOC_3622 PF07715 TonB-dependent Receptor Plug Domain XOC_3622 PF00593 TonB dependent receptor XOC_3623 PF07715 TonB-dependent Receptor Plug Domain XOC_3623 PF00593 TonB dependent receptor XOC_3624 PF02780 Transketolase, C-terminal domain XOC_3624 PF02779 Transketolase, pyrimidine binding domain XOC_3624 PF00456 Transketolase, thiamine diphosphate binding domain XOC_3625 PF00375 Sodium:dicarboxylate symporter family XOC_3626 PF01527 Transposase XOC_3627 PF13276 HTH-like domain XOC_3628 PF13683 Integrase core domain XOC_3628 PF13276 HTH-like domain XOC_3629 PF05598 Transposase domain (DUF772) XOC_3631 PF00092 von Willebrand factor type A domain XOC_3631 PF07584 Aerotolerance regulator N-terminal XOC_3635 PF17863 AAA lid domain XOC_3635 PF07726 ATPase family associated with various cellular activities (AAA) XOC_3636 PF03958 Bacterial type II/III secretion system short domain XOC_3636 PF00263 Bacterial type II and III secretion system protein XOC_3636 PF07660 Secretin and TonB N terminus short domain XOC_3636 PF11741 AMIN domain XOC_3641 PF00905 Penicillin binding protein transpeptidase domain XOC_3641 PF17092 Penicillin-binding protein OB-like domain XOC_3641 PF00912 Transglycosylase XOC_3645 PF00285 Citrate synthase, C-terminal domain XOC_3646 PF01197 Ribosomal protein L31 XOC_3647 PF01156 Inosine-uridine preferring nucleoside hydrolase XOC_3648 PF17191 RecG wedge domain XOC_3648 PF00270 DEAD/DEAH box helicase XOC_3648 PF00271 Helicase conserved C-terminal domain XOC_3649 PF01042 Endoribonuclease L-PSP XOC_3650 PF13291 ACT domain XOC_3650 PF04607 Region found in RelA / SpoT proteins XOC_3650 PF02824 TGS domain XOC_3651 PF01192 RNA polymerase Rpb6 XOC_3652 PF00625 Guanylate kinase XOC_3653 PF03755 YicC-like family, N-terminal region XOC_3653 PF08340 Domain of unknown function (DUF1732) XOC_3654 PF01138 3' exoribonuclease family, domain 1 XOC_3654 PF03725 3' exoribonuclease family, domain 2 XOC_3655 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XOC_3656 PF01725 Ham1 family XOC_3657 PF04055 Radical SAM superfamily XOC_3657 PF06969 HemN C-terminal domain XOC_3660 PF00557 Metallopeptidase family M24 XOC_3662 PF05195 Aminopeptidase P, N-terminal domain XOC_3662 PF00557 Metallopeptidase family M24 XOC_3663 PF03695 Uncharacterised protein family (UPF0149) XOC_3665 PF05164 Cell division protein ZapA XOC_3666 PF01812 5-formyltetrahydrofolate cyclo-ligase family XOC_3668 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) XOC_3670 PF13369 Transglutaminase-like superfamily XOC_3671 PF00301 Rubredoxin XOC_3672 PF02581 Thiamine monophosphate synthase XOC_3674 PF00202 Aminotransferase class-III XOC_3677 PF00196 Bacterial regulatory proteins, luxR family XOC_3677 PF17874 MalT-like TPR region XOC_3678 PF00196 Bacterial regulatory proteins, luxR family XOC_3678 PF17874 MalT-like TPR region XOC_3679 PF00127 Copper binding proteins, plastocyanin/azurin family XOC_3681 PF00155 Aminotransferase class I and II XOC_3684 PF13442 Cytochrome C oxidase, cbb3-type, subunit III XOC_3684 PF00034 Cytochrome c XOC_3685 PF01593 Flavin containing amine oxidoreductase XOC_3688 PF00202 Aminotransferase class-III XOC_3689 PF00520 Ion transport protein XOC_3689 PF00027 Cyclic nucleotide-binding domain XOC_3696 PF01062 Bestrophin, RFP-TM, chloride channel XOC_3698 PF01225 Mur ligase family, catalytic domain XOC_3698 PF02875 Mur ligase family, glutamate ligase domain XOC_3698 PF08245 Mur ligase middle domain XOC_3700 PF00365 Phosphofructokinase XOC_3702 PF05598 Transposase domain (DUF772) XOC_3704 PF00665 Integrase core domain XOC_3704 PF13936 Helix-turn-helix domain XOC_3705 PF03030 Inorganic H+ pyrophosphatase XOC_3707 PF00719 Inorganic pyrophosphatase XOC_3709 PF00593 TonB dependent receptor XOC_3709 PF07715 TonB-dependent Receptor Plug Domain XOC_3710 PF12833 Helix-turn-helix domain XOC_3711 PF00486 Transcriptional regulatory protein, C terminal XOC_3711 PF18500 CadC C-terminal domain 1 XOC_3712 PF13667 ThiC-associated domain XOC_3712 PF01964 Radical SAM ThiC family XOC_3713 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain XOC_3713 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain XOC_3714 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain XOC_3714 PF00205 Thiamine pyrophosphate enzyme, central domain XOC_3714 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain XOC_3716 PF00291 Pyridoxal-phosphate dependent enzyme XOC_3717 PF00682 HMGL-like XOC_3717 PF08502 LeuA allosteric (dimerisation) domain XOC_3718 PF00180 Isocitrate/isopropylmalate dehydrogenase XOC_3719 PF08241 Methyltransferase domain XOC_3720 PF00694 Aconitase C-terminal domain XOC_3721 PF00330 Aconitase family (aconitate hydratase) XOC_3722 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XOC_3723 PF17158 Membrane-associated sensor, integral membrane domain XOC_3723 PF00990 Diguanylate cyclase, GGDEF domain XOC_3726 PF02321 Outer membrane efflux protein XOC_3727 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) XOC_3728 PF03279 Bacterial lipid A biosynthesis acyltransferase XOC_3735 PF03949 Malic enzyme, NAD binding domain XOC_3735 PF00390 Malic enzyme, N-terminal domain XOC_3735 PF01515 Phosphate acetyl/butaryl transferase XOC_3737 PF00375 Sodium:dicarboxylate symporter family XOC_3739 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XOC_3739 PF00512 His Kinase A (phospho-acceptor) domain XOC_3740 PF07690 Major Facilitator Superfamily XOC_3741 PF03466 LysR substrate binding domain XOC_3741 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XOC_3745 PF00196 Bacterial regulatory proteins, luxR family XOC_3745 PF00072 Response regulator receiver domain XOC_3747 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XOC_3747 PF00512 His Kinase A (phospho-acceptor) domain XOC_3747 PF08521 Two-component sensor kinase N-terminal XOC_3748 PF00486 Transcriptional regulatory protein, C terminal XOC_3748 PF00072 Response regulator receiver domain XOC_3751 PF03600 Citrate transporter XOC_3753 PF00106 short chain dehydrogenase XOC_3754 PF00356 Bacterial regulatory proteins, lacI family XOC_3755 PF05598 Transposase domain (DUF772) XOC_3758 PF00128 Alpha amylase, catalytic domain XOC_3761 PF03193 RsgA GTPase XOC_3765 PF01522 Polysaccharide deacetylase XOC_3766 PF00462 Glutaredoxin XOC_3771 PF01979 Amidohydrolase family XOC_3772 PF01979 Amidohydrolase family XOC_3776 PF01327 Polypeptide deformylase XOC_3777 PF03960 ArsC family XOC_3781 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family XOC_3781 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain XOC_3788 PF07715 TonB-dependent Receptor Plug Domain XOC_3788 PF00593 TonB dependent receptor XOC_3790 PF07702 UTRA domain XOC_3790 PF00392 Bacterial regulatory proteins, gntR family XOC_3794 PF00263 Bacterial type II and III secretion system protein XOC_3794 PF03958 Bacterial type II/III secretion system short domain XOC_3796 PF10741 Type II secretion system (T2SS), protein M subtype b XOC_3797 PF05137 Fimbrial assembly protein (PilN) XOC_3798 PF03934 Type II secretion system (T2SS), protein K XOC_3800 PF07963 Prokaryotic N-terminal methylation motif XOC_3801 PF12019 Type II transport protein GspH XOC_3802 PF08334 Type II secretion system (T2SS), protein G XOC_3803 PF00482 Type II secretion system (T2SS), protein F XOC_3805 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain XOC_3805 PF00437 Type II/IV secretion system protein XOC_3806 PF04151 Bacterial pre-peptidase C-terminal domain XOC_3806 PF00082 Subtilase family XOC_3808 PF03895 YadA-like membrane anchor domain XOC_3808 PF05658 Head domain of trimeric autotransporter adhesin XOC_3808 PF05662 Coiled stalk of trimeric autotransporter adhesin XOC_3808 PF13018 Extended Signal Peptide of Type V secretion system XOC_3809 PF02769 AIR synthase related protein, C-terminal domain XOC_3809 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal XOC_3809 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain XOC_3811 PF13098 Thioredoxin-like domain XOC_3811 PF10411 Disulfide bond isomerase protein N-terminus XOC_3812 PF00589 Phage integrase family XOC_3812 PF02899 Phage integrase, N-terminal SAM-like domain XOC_3815 PF03739 Lipopolysaccharide export system permease LptF/LptG XOC_3817 PF00883 Cytosol aminopeptidase family, catalytic domain XOC_3817 PF02789 Cytosol aminopeptidase family, N-terminal domain XOC_3820 PF00133 tRNA synthetases class I (I, L, M and V) XOC_3820 PF10458 Valyl tRNA synthetase tRNA binding arm XOC_3820 PF08264 Anticodon-binding domain of tRNA XOC_3822 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain XOC_3822 PF01464 Transglycosylase SLT domain XOC_3823 PF00544 Pectate lyase XOC_3827 PF01066 CDP-alcohol phosphatidyltransferase XOC_3829 PF04073 Aminoacyl-tRNA editing domain XOC_3829 PF03129 Anticodon binding domain XOC_3829 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) XOC_3830 PF00816 H-NS histone family XOC_3832 PF02405 Permease MlaE XOC_3833 PF00005 ABC transporter XOC_3834 PF02470 MlaD protein XOC_3834 PF03886 ABC-type transport auxiliary lipoprotein component XOC_3838 PF05045 Rhamnan synthesis protein F XOC_3838 PF14307 Glycosyltransferase WbsX XOC_3839 PF01144 Coenzyme A transferase XOC_3840 PF01144 Coenzyme A transferase XOC_3841 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain XOC_3841 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II XOC_3841 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I XOC_3841 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III XOC_3842 PF01050 Mannose-6-phosphate isomerase XOC_3842 PF00483 Nucleotidyl transferase XOC_3843 PF04321 RmlD substrate binding domain XOC_3844 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase XOC_3845 PF00483 Nucleotidyl transferase XOC_3846 PF16363 GDP-mannose 4,6 dehydratase XOC_3847 PF01012 Electron transfer flavoprotein domain XOC_3848 PF01012 Electron transfer flavoprotein domain XOC_3848 PF00766 Electron transfer flavoprotein FAD-binding domain XOC_3850 PF01040 UbiA prenyltransferase family XOC_3851 PF04030 D-arabinono-1,4-lactone oxidase XOC_3851 PF01565 FAD binding domain XOC_3852 PF00106 short chain dehydrogenase XOC_3854 PF01370 NAD dependent epimerase/dehydratase family XOC_3855 PF07992 Pyridine nucleotide-disulphide oxidoreductase XOC_3855 PF00724 NADH:flavin oxidoreductase / NADH oxidase family XOC_3861 PF05598 Transposase domain (DUF772) XOC_3863 PF01209 ubiE/COQ5 methyltransferase family XOC_3865 PF14307 Glycosyltransferase WbsX XOC_3865 PF05045 Rhamnan synthesis protein F XOC_3866 PF00535 Glycosyl transferase family 2 XOC_3867 PF00132 Bacterial transferase hexapeptide (six repeats) XOC_3868 PF00005 ABC transporter XOC_3870 PF01053 Cys/Met metabolism PLP-dependent enzyme XOC_3871 PF00291 Pyridoxal-phosphate dependent enzyme XOC_3871 PF00571 CBS domain XOC_3876 PF00437 Type II/IV secretion system protein XOC_3877 PF02798 Glutathione S-transferase, N-terminal domain XOC_3877 PF14497 Glutathione S-transferase, C-terminal domain XOC_3880 PF00271 Helicase conserved C-terminal domain XOC_3880 PF00270 DEAD/DEAH box helicase XOC_3882 PF01242 6-pyruvoyl tetrahydropterin synthase XOC_3885 PF13185 GAF domain XOC_3887 PF13419 Haloacid dehalogenase-like hydrolase XOC_3888 PF11799 impB/mucB/samB family C-terminal domain XOC_3888 PF00817 impB/mucB/samB family XOC_3889 PF07977 FabA-like domain XOC_3890 PF00109 Beta-ketoacyl synthase, N-terminal domain XOC_3890 PF02801 Beta-ketoacyl synthase, C-terminal domain XOC_3892 PF01432 Peptidase family M3 XOC_3895 PF07731 Multicopper oxidase XOC_3895 PF07732 Multicopper oxidase XOC_3895 PF00394 Multicopper oxidase XOC_3896 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XOC_3898 PF05598 Transposase domain (DUF772) XOC_3901 PF01380 SIS domain XOC_3902 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XOC_3903 PF00005 ABC transporter XOC_3905 PF00005 ABC transporter XOC_3905 PF02687 FtsX-like permease family XOC_3905 PF12704 MacB-like periplasmic core domain XOC_3906 PF00005 ABC transporter XOC_3906 PF02687 FtsX-like permease family XOC_3906 PF12704 MacB-like periplasmic core domain XOC_3907 PF00005 ABC transporter XOC_3907 PF12704 MacB-like periplasmic core domain XOC_3907 PF02687 FtsX-like permease family XOC_3908 PF02954 Bacterial regulatory protein, Fis family XOC_3908 PF00072 Response regulator receiver domain XOC_3908 PF00158 Sigma-54 interaction domain XOC_3909 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XOC_3909 PF00512 His Kinase A (phospho-acceptor) domain XOC_3909 PF00989 PAS fold XOC_3910 PF14602 Hexapeptide repeat of succinyl-transferase XOC_3910 PF12804 MobA-like NTP transferase domain XOC_3910 PF00132 Bacterial transferase hexapeptide (six repeats) XOC_3912 PF01817 Chorismate mutase type II XOC_3914 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain XOC_3915 PF02874 ATP synthase alpha/beta family, beta-barrel domain XOC_3915 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XOC_3916 PF00231 ATP synthase XOC_3917 PF00306 ATP synthase alpha/beta chain, C terminal domain XOC_3917 PF02874 ATP synthase alpha/beta family, beta-barrel domain XOC_3917 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XOC_3918 PF00213 ATP synthase delta (OSCP) subunit XOC_3919 PF00430 ATP synthase B/B' CF(0) XOC_3920 PF00137 ATP synthase subunit C XOC_3921 PF00119 ATP synthase A chain XOC_3925 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain XOC_3925 PF07992 Pyridine nucleotide-disulphide oxidoreductase XOC_3927 PF02817 e3 binding domain XOC_3927 PF00364 Biotin-requiring enzyme XOC_3927 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) XOC_3935 PF03180 NLPA lipoprotein XOC_3936 PF00528 Binding-protein-dependent transport system inner membrane component XOC_3937 PF00005 ABC transporter XOC_3937 PF09383 NIL domain XOC_3938 PF00892 EamA-like transporter family XOC_3939 PF04461 Protein of unknown function (DUF520) XOC_3944 PF00072 Response regulator receiver domain XOC_3944 PF00486 Transcriptional regulatory protein, C terminal XOC_3948 PF13419 Haloacid dehalogenase-like hydrolase XOC_3949 PF00849 RNA pseudouridylate synthase XOC_3949 PF01479 S4 domain XOC_3950 PF05175 Methyltransferase small domain XOC_3950 PF08468 Methyltransferase small domain N-terminal XOC_3952 PF07995 Glucose / Sorbosone dehydrogenase XOC_3954 PF00512 His Kinase A (phospho-acceptor) domain XOC_3954 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XOC_3954 PF00989 PAS fold XOC_3958 PF00842 Alanine racemase, C-terminal domain XOC_3958 PF01168 Alanine racemase, N-terminal domain XOC_3959 PF01266 FAD dependent oxidoreductase XOC_3960 PF01037 Lrp/AsnC ligand binding domain XOC_3962 PF01641 SelR domain XOC_3964 PF01618 MotA/TolQ/ExbB proton channel family XOC_3965 PF00691 OmpA family XOC_3965 PF13677 Membrane MotB of proton-channel complex MotA/MotB XOC_3968 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XOC_3968 PF00512 His Kinase A (phospho-acceptor) domain XOC_3968 PF08448 PAS fold XOC_3968 PF00072 Response regulator receiver domain XOC_3968 PF13188 PAS domain XOC_3969 PF00486 Transcriptional regulatory protein, C terminal XOC_3969 PF00072 Response regulator receiver domain XOC_3972 PF00082 Subtilase family XOC_3972 PF04151 Bacterial pre-peptidase C-terminal domain XOC_3975 PF01061 ABC-2 type transporter XOC_3976 PF00005 ABC transporter XOC_3977 PF00999 Sodium/hydrogen exchanger family XOC_3980 PF02469 Fasciclin domain XOC_3981 PF03167 Uracil DNA glycosylase superfamily XOC_3983 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase XOC_3987 PF00248 Aldo/keto reductase family XOC_3990 PF05649 Peptidase family M13 XOC_3990 PF01431 Peptidase family M13 XOC_3993 PF01609 Transposase DDE domain XOC_3993 PF05598 Transposase domain (DUF772) XOC_3994 PF13520 Amino acid permease XOC_3996 PF00072 Response regulator receiver domain XOC_3996 PF04397 LytTr DNA-binding domain XOC_3997 PF02743 Cache domain XOC_3997 PF00672 HAMP domain XOC_3997 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XOC_3997 PF06580 Histidine kinase XOC_4001 PF01739 CheR methyltransferase, SAM binding domain XOC_4001 PF03705 CheR methyltransferase, all-alpha domain XOC_4001 PF08448 PAS fold XOC_4001 PF01339 CheB methylesterase XOC_4004 PF00158 Sigma-54 interaction domain XOC_4004 PF02954 Bacterial regulatory protein, Fis family XOC_4004 PF00072 Response regulator receiver domain XOC_4006 PF01654 Cytochrome bd terminal oxidase subunit I XOC_4007 PF02322 Cytochrome bd terminal oxidase subunit II XOC_4010 PF00107 Zinc-binding dehydrogenase XOC_4010 PF13823 Alcohol dehydrogenase GroES-associated XOC_4010 PF08240 Alcohol dehydrogenase GroES-like domain XOC_4021 PF00593 TonB dependent receptor XOC_4021 PF07715 TonB-dependent Receptor Plug Domain XOC_4024 PF00005 ABC transporter XOC_4025 PF03377 TAL effector repeat XOC_4027 PF05598 Transposase domain (DUF772) XOC_4028 PF13276 HTH-like domain XOC_4029 PF01527 Transposase XOC_4032 PF08335 GlnD PII-uridylyltransferase XOC_4032 PF03710 Glutamate-ammonia ligase adenylyltransferase XOC_4033 PF02592 Putative vitamin uptake transporter XOC_4041 PF00881 Nitroreductase family XOC_4042 PF04264 YceI-like domain XOC_4043 PF13276 HTH-like domain XOC_4043 PF13683 Integrase core domain XOC_4044 PF00456 Transketolase, thiamine diphosphate binding domain XOC_4044 PF17831 Pyruvate dehydrogenase E1 component middle domain XOC_4047 PF05598 Transposase domain (DUF772) XOC_4049 PF05598 Transposase domain (DUF772) XOC_4051 PF05598 Transposase domain (DUF772) XOC_4053 PF01609 Transposase DDE domain XOC_4053 PF05598 Transposase domain (DUF772) XOC_4054 PF04829 Pre-toxin domain with VENN motif XOC_4054 PF05594 Haemagluttinin repeat XOC_4054 PF13332 Hemagglutinin repeat XOC_4059 PF04829 Pre-toxin domain with VENN motif XOC_4059 PF05860 haemagglutination activity domain XOC_4059 PF13332 Hemagglutinin repeat XOC_4061 PF13332 Hemagglutinin repeat XOC_4061 PF04829 Pre-toxin domain with VENN motif XOC_4061 PF05594 Haemagluttinin repeat XOC_4064 PF13332 Hemagglutinin repeat XOC_4064 PF13018 Extended Signal Peptide of Type V secretion system XOC_4064 PF04829 Pre-toxin domain with VENN motif XOC_4064 PF05860 haemagglutination activity domain XOC_4065 PF08479 POTRA domain, ShlB-type XOC_4065 PF17287 POTRA domain XOC_4065 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB XOC_4072 PF01609 Transposase DDE domain XOC_4072 PF05598 Transposase domain (DUF772) XOC_4074 PF00665 Integrase core domain XOC_4074 PF13936 Helix-turn-helix domain XOC_4076 PF13406 Transglycosylase SLT domain XOC_4077 PF01527 Transposase XOC_4078 PF13276 HTH-like domain XOC_4079 PF05598 Transposase domain (DUF772) XOC_4080 PF13276 HTH-like domain XOC_4080 PF13683 Integrase core domain XOC_4081 PF05598 Transposase domain (DUF772) XOC_4081 PF01609 Transposase DDE domain XOC_4082 PF13276 HTH-like domain XOC_4082 PF13683 Integrase core domain XOC_4085 PF12704 MacB-like periplasmic core domain XOC_4085 PF02687 FtsX-like permease family XOC_4094 PF02558 Ketopantoate reductase PanE/ApbA XOC_4094 PF08546 Ketopantoate reductase PanE/ApbA C terminal XOC_4096 PF01061 ABC-2 type transporter XOC_4097 PF00005 ABC transporter XOC_4098 PF00175 Oxidoreductase NAD-binding domain XOC_4098 PF01383 CpcD/allophycocyanin linker domain XOC_4099 PF01545 Cation efflux family XOC_4100 PF02583 Metal-sensitive transcriptional repressor XOC_4103 PF01381 Helix-turn-helix XOC_4105 PF00005 ABC transporter XOC_4114 PF02798 Glutathione S-transferase, N-terminal domain XOC_4114 PF00043 Glutathione S-transferase, C-terminal domain XOC_4115 PF00326 Prolyl oligopeptidase family XOC_4115 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region XOC_4120 PF04545 Sigma-70, region 4 XOC_4120 PF04542 Sigma-70 region 2 XOC_4120 PF00140 Sigma-70 factor, region 1.2 XOC_4120 PF04539 Sigma-70 region 3 XOC_4120 PF04546 Sigma-70, non-essential region XOC_4120 PF03979 Sigma-70 factor, region 1.1 XOC_4121 PF02580 D-Tyr-tRNA(Tyr) deacylase XOC_4122 PF03279 Bacterial lipid A biosynthesis acyltransferase XOC_4124 PF00925 GTP cyclohydrolase II XOC_4129 PF00535 Glycosyl transferase family 2 XOC_4132 PF01189 16S rRNA methyltransferase RsmB/F XOC_4132 PF01029 NusB family XOC_4133 PF00551 Formyl transferase XOC_4133 PF02911 Formyl transferase, C-terminal domain XOC_4134 PF01327 Polypeptide deformylase XOC_4135 PF01476 LysM domain XOC_4136 PF17782 DprA winged helix domain XOC_4136 PF02481 DNA recombination-mediator protein A XOC_4137 PF04361 Protein of unknown function (DUF494) XOC_4138 PF07963 Prokaryotic N-terminal methylation motif XOC_4138 PF00114 Pilin (bacterial filament) XOC_4140 PF01131 DNA topoisomerase XOC_4140 PF01751 Toprim domain XOC_4140 PF13368 Topoisomerase C-terminal repeat XOC_4141 PF01300 Telomere recombination XOC_4146 PF01343 Peptidase family S49 XOC_4147 PF01554 MatE XOC_4152 PF18319 PriA DNA helicase Cys-rich region (CRR) domain XOC_4152 PF18074 Primosomal protein N C-terminal domain XOC_4152 PF17764 3′ DNA-binding domain (3′BD) XOC_4152 PF00270 DEAD/DEAH box helicase XOC_4152 PF00271 Helicase conserved C-terminal domain XOC_4154 PF03091 CutA1 divalent ion tolerance protein XOC_4155 PF02683 Cytochrome C biogenesis protein transmembrane region XOC_4155 PF11412 Disulphide bond corrector protein DsbC XOC_4156 PF01220 Dehydroquinase class II XOC_4157 PF00364 Biotin-requiring enzyme XOC_4159 PF02785 Biotin carboxylase C-terminal domain XOC_4159 PF00289 Biotin carboxylase, N-terminal domain XOC_4159 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain XOC_4165 PF01381 Helix-turn-helix XOC_4167 PF02954 Bacterial regulatory protein, Fis family XOC_4170 PF00818 Ice nucleation protein repeat XOC_4172 PF01808 AICARFT/IMPCHase bienzyme XOC_4172 PF02142 MGS-like domain XOC_4173 PF02843 Phosphoribosylglycinamide synthetase, C domain XOC_4173 PF02844 Phosphoribosylglycinamide synthetase, N domain XOC_4173 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain XOC_4174 PF02687 FtsX-like permease family XOC_4174 PF12704 MacB-like periplasmic core domain XOC_4174 PF00005 ABC transporter XOC_4176 PF12805 FUSC-like inner membrane protein yccS XOC_4177 PF07690 Major Facilitator Superfamily XOC_4180 PF07690 Major Facilitator Superfamily XOC_4183 PF17113 Regulatory signalling modulator protein AmpE XOC_4183 PF03186 CobD/Cbib protein XOC_4184 PF00293 NUDIX domain XOC_4184 PF09297 NADH pyrophosphatase zinc ribbon domain XOC_4184 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain XOC_4186 PF01521 Iron-sulphur cluster biosynthesis XOC_4190 PF03707 Bacterial signalling protein N terminal repeat XOC_4190 PF00990 Diguanylate cyclase, GGDEF domain XOC_4190 PF00563 EAL domain XOC_4191 PF00512 His Kinase A (phospho-acceptor) domain XOC_4191 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XOC_4191 PF00672 HAMP domain XOC_4191 PF00072 Response regulator receiver domain XOC_4191 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) XOC_4191 PF01627 Hpt domain XOC_4192 PF00210 Ferritin-like domain XOC_4194 PF00293 NUDIX domain XOC_4197 PF00380 Ribosomal protein S9/S16 XOC_4198 PF00572 Ribosomal protein L13 XOC_4199 PF03232 Ubiquinone biosynthesis protein COQ7 XOC_4200 PF00893 Small Multidrug Resistance protein XOC_4201 PF02675 S-adenosylmethionine decarboxylase XOC_4202 PF00325 Bacterial regulatory proteins, crp family XOC_4202 PF00027 Cyclic nucleotide-binding domain XOC_4204 PF00218 Indole-3-glycerol phosphate synthase XOC_4205 PF00591 Glycosyl transferase family, a/b domain XOC_4205 PF02885 Glycosyl transferase family, helical bundle domain XOC_4208 PF00117 Glutamine amidotransferase class-I XOC_4211 PF00425 chorismate binding enzyme XOC_4211 PF04715 Anthranilate synthase component I, N terminal region XOC_4212 PF00781 Diacylglycerol kinase catalytic domain XOC_4213 PF00583 Acetyltransferase (GNAT) family XOC_4214 PF00834 Ribulose-phosphate 3 epimerase family XOC_4215 PF00226 DnaJ domain XOC_4215 PF05099 Tellurite resistance protein TerB XOC_4216 PF01259 SAICAR synthetase XOC_4220 PF00156 Phosphoribosyl transferase domain XOC_4222 PF13614 AAA domain XOC_4223 PF02195 ParB-like nuclease domain XOC_4223 PF17762 HTH domain found in ParB protein XOC_4226 PF01370 NAD dependent epimerase/dehydratase family XOC_4227 PF00535 Glycosyl transferase family 2 XOC_4230 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain XOC_4230 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I XOC_4230 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II XOC_4230 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III XOC_4231 PF00692 dUTPase XOC_4232 PF04127 DNA / pantothenate metabolism flavoprotein XOC_4232 PF02441 Flavoprotein XOC_4233 PF04002 RadC-like JAB domain XOC_4234 PF05746 DALR anticodon binding domain XOC_4234 PF00750 tRNA synthetases class I (R) XOC_4234 PF03485 Arginyl tRNA synthetase N terminal domain XOC_4237 PF00106 short chain dehydrogenase XOC_4238 PF01757 Acyltransferase family XOC_4240 PF05598 Transposase domain (DUF772) XOC_4240 PF01609 Transposase DDE domain XOC_4241 PF17810 Arginine decarboxylase helical bundle domain XOC_4241 PF17944 Arginine decarboxylase C-terminal helical extension XOC_4241 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain XOC_4242 PF17284 Spermidine synthase tetramerisation domain XOC_4245 PF05598 Transposase domain (DUF772) XOC_4246 PF13683 Integrase core domain XOC_4246 PF13276 HTH-like domain XOC_4247 PF01527 Transposase XOC_4248 PF03377 TAL effector repeat XOC_4250 PF03377 TAL effector repeat XOC_4254 PF13276 HTH-like domain XOC_4254 PF00665 Integrase core domain XOC_4254 PF13333 Integrase core domain XOC_4255 PF05598 Transposase domain (DUF772) XOC_4259 PF00543 Nitrogen regulatory protein P-II XOC_4260 PF04380 Membrane fusogenic activity XOC_4261 PF13335 Magnesium chelatase, subunit ChlI C-terminal XOC_4261 PF01078 Magnesium chelatase, subunit ChlI XOC_4265 PF12792 CSS motif domain associated with EAL XOC_4265 PF00563 EAL domain XOC_4266 PF00487 Fatty acid desaturase XOC_4267 PF00175 Oxidoreductase NAD-binding domain XOC_4267 PF00970 Oxidoreductase FAD-binding domain XOC_4267 PF00111 2Fe-2S iron-sulfur cluster binding domain XOC_4268 PF00440 Bacterial regulatory proteins, tetR family XOC_4276 PF01370 NAD dependent epimerase/dehydratase family XOC_4276 PF08338 Domain of unknown function (DUF1731) XOC_4279 PF00595 PDZ domain XOC_4285 PF01594 AI-2E family transporter XOC_4287 PF00883 Cytosol aminopeptidase family, catalytic domain XOC_4287 PF02789 Cytosol aminopeptidase family, N-terminal domain XOC_4289 PF08281 Sigma-70, region 4 XOC_4289 PF04542 Sigma-70 region 2 XOC_4290 PF00199 Catalase XOC_4294 PF00892 EamA-like transporter family XOC_4299 PF00753 Metallo-beta-lactamase superfamily XOC_4300 PF00579 tRNA synthetases class I (W and Y) XOC_4301 PF05532 CsbD-like XOC_4304 PF00491 Arginase family XOC_4308 PF02223 Thymidylate kinase XOC_4309 PF01609 Transposase DDE domain XOC_4309 PF05598 Transposase domain (DUF772) XOC_4312 PF03309 Type III pantothenate kinase XOC_4313 PF03099 Biotin/lipoate A/B protein ligase family XOC_4313 PF08279 HTH domain XOC_4313 PF02237 Biotin protein ligase C terminal domain XOC_4315 PF06167 Glucose-regulated metallo-peptidase M90 XOC_4318 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XOC_4318 PF00512 His Kinase A (phospho-acceptor) domain XOC_4318 PF00672 HAMP domain XOC_4319 PF00072 Response regulator receiver domain XOC_4319 PF00486 Transcriptional regulatory protein, C terminal XOC_4321 PF01207 Dihydrouridine synthase (Dus) XOC_4325 PF00199 Catalase XOC_4325 PF06628 Catalase-related immune-responsive XOC_4326 PF13533 Biotin-lipoyl like XOC_4329 PF13307 Helicase C-terminal domain XOC_4329 PF06733 DEAD_2 XOC_4333 PF01488 Shikimate / quinate 5-dehydrogenase XOC_4333 PF18317 Shikimate 5'-dehydrogenase C-terminal domain XOC_4333 PF08501 Shikimate dehydrogenase substrate binding domain XOC_4335 PF00175 Oxidoreductase NAD-binding domain XOC_4335 PF00258 Flavodoxin XOC_4335 PF00667 FAD binding domain XOC_4340 PF00490 Delta-aminolevulinic acid dehydratase XOC_4348 PF05368 NmrA-like family XOC_4349 PF01638 HxlR-like helix-turn-helix XOC_4351 PF08267 Cobalamin-independent synthase, N-terminal domain XOC_4351 PF01717 Cobalamin-independent synthase, Catalytic domain XOC_4353 PF03358 NADPH-dependent FMN reductase XOC_4354 PF03466 LysR substrate binding domain XOC_4354 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XOC_4355 PF02677 Epoxyqueuosine reductase QueH XOC_4357 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XOC_4357 PF00512 His Kinase A (phospho-acceptor) domain XOC_4357 PF00672 HAMP domain XOC_4358 PF00672 HAMP domain XOC_4358 PF00512 His Kinase A (phospho-acceptor) domain XOC_4358 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XOC_4359 PF00072 Response regulator receiver domain XOC_4359 PF00486 Transcriptional regulatory protein, C terminal XOC_4360 PF00551 Formyl transferase XOC_4362 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase XOC_4362 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase XOC_4364 PF02146 Sir2 family XOC_4368 PF07690 Major Facilitator Superfamily XOC_4369 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XOC_4369 PF03466 LysR substrate binding domain XOC_4372 PF01026 TatD related DNase XOC_4376 PF00561 alpha/beta hydrolase fold XOC_4378 PF13936 Helix-turn-helix domain XOC_4378 PF00665 Integrase core domain XOC_4380 PF13936 Helix-turn-helix domain XOC_4380 PF00665 Integrase core domain XOC_4382 PF04717 Type VI secretion system, phage-baseplate injector XOC_4382 PF16671 Actin cross-linking domain XOC_4384 PF03377 TAL effector repeat XOC_4385 PF01527 Transposase XOC_4386 PF13276 HTH-like domain XOC_4387 PF13683 Integrase core domain XOC_4387 PF13276 HTH-like domain XOC_4392 PF03377 TAL effector repeat XOC_4395 PF04717 Type VI secretion system, phage-baseplate injector XOC_4395 PF16671 Actin cross-linking domain XOC_4397 PF01527 Transposase XOC_4398 PF13276 HTH-like domain XOC_4398 PF13333 Integrase core domain XOC_4398 PF00665 Integrase core domain XOC_4399 PF03377 TAL effector repeat XOC_4403 PF13276 HTH-like domain XOC_4403 PF00665 Integrase core domain XOC_4403 PF13333 Integrase core domain XOC_4405 PF05598 Transposase domain (DUF772) XOC_4407 PF05598 Transposase domain (DUF772) XOC_4407 PF01609 Transposase DDE domain XOC_4408 PF00665 Integrase core domain XOC_4408 PF13936 Helix-turn-helix domain XOC_4410 PF13460 NAD(P)H-binding XOC_4411 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) XOC_4411 PF00128 Alpha amylase, catalytic domain XOC_4413 PF00128 Alpha amylase, catalytic domain XOC_4414 PF02446 4-alpha-glucanotransferase XOC_4415 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) XOC_4415 PF11941 Domain of unknown function (DUF3459) XOC_4415 PF00128 Alpha amylase, catalytic domain XOC_4416 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) XOC_4416 PF02806 Alpha amylase, C-terminal all-beta domain XOC_4416 PF00128 Alpha amylase, catalytic domain XOC_4417 PF08323 Starch synthase catalytic domain XOC_4417 PF00534 Glycosyl transferases group 1 XOC_4420 PF00990 Diguanylate cyclase, GGDEF domain XOC_4420 PF00072 Response regulator receiver domain XOC_4421 PF05661 Protein of unknown function (DUF808) XOC_4422 PF03109 ABC1 family XOC_4425 PF12794 Mechanosensitive ion channel inner membrane domain 1 XOC_4425 PF12795 Mechanosensitive ion channel porin domain XOC_4425 PF00924 Mechanosensitive ion channel XOC_4430 PF01464 Transglycosylase SLT domain XOC_4435 PF01311 Bacterial export proteins, family 1 XOC_4437 PF02874 ATP synthase alpha/beta family, beta-barrel domain XOC_4437 PF18269 T3SS EscN ATPase C-terminal domain XOC_4437 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XOC_4440 PF01514 Secretory protein of YscJ/FliF family XOC_4443 PF01312 FlhB HrpN YscU SpaS Family XOC_4444 PF00771 FHIPEP family XOC_4448 PF00813 FliP family XOC_4449 PF01313 Bacterial export proteins, family 3 XOC_4457 PF05819 NolX protein XOC_4465 PF01232 Mannitol dehydrogenase Rossmann domain XOC_4465 PF08125 Mannitol dehydrogenase C-terminal domain XOC_4466 PF07691 PA14 domain XOC_4466 PF01915 Glycosyl hydrolase family 3 C-terminal domain XOC_4466 PF00933 Glycosyl hydrolase family 3 N terminal domain XOC_4466 PF14310 Fibronectin type III-like domain XOC_4467 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain XOC_4467 PF04616 Glycosyl hydrolases family 43 XOC_4468 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain XOC_4468 PF13378 Enolase C-terminal domain-like XOC_4470 PF03648 Glycosyl hydrolase family 67 N-terminus XOC_4470 PF07477 Glycosyl hydrolase family 67 C-terminus XOC_4470 PF07488 Glycosyl hydrolase family 67 middle domain XOC_4473 PF00356 Bacterial regulatory proteins, lacI family XOC_4476 PF01171 PP-loop family XOC_4477 PF04381 Putative exonuclease, RdgC XOC_4480 PF12697 Alpha/beta hydrolase family XOC_4481 PF00762 Ferrochelatase XOC_4483 PF02416 mttA/Hcf106 family XOC_4484 PF02416 mttA/Hcf106 family XOC_4485 PF00902 Sec-independent protein translocase protein (TatC) XOC_4487 PF00117 Glutamine amidotransferase class-I XOC_4487 PF00958 GMP synthase C terminal domain XOC_4491 PF00437 Type II/IV secretion system protein XOC_4491 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain XOC_4492 PF02091 Glycyl-tRNA synthetase alpha subunit XOC_4494 PF05746 DALR anticodon binding domain XOC_4494 PF02092 Glycyl-tRNA synthetase beta subunit XOC_4495 PF13181 Tetratricopeptide repeat XOC_4496 PF05598 Transposase domain (DUF772) XOC_4498 PF00593 TonB dependent receptor XOC_4498 PF07715 TonB-dependent Receptor Plug Domain XOC_4499 PF01103 Surface antigen XOC_4499 PF17243 POTRA domain TamA domain 1 XOC_4500 PF04357 TamB, inner membrane protein subunit of TAM complex XOC_4502 PF05598 Transposase domain (DUF772) XOC_4503 PF05598 Transposase domain (DUF772) XOC_4505 PF13356 Arm DNA-binding domain XOC_4505 PF00589 Phage integrase family XOC_4508 PF01040 UbiA prenyltransferase family XOC_4509 PF00156 Phosphoribosyl transferase domain XOC_4511 PF04055 Radical SAM superfamily XOC_4511 PF06968 Biotin and Thiamin Synthesis associated domain XOC_4512 PF00155 Aminotransferase class I and II XOC_4515 PF12697 Alpha/beta hydrolase family XOC_4517 PF13649 Methyltransferase domain XOC_4521 PF00291 Pyridoxal-phosphate dependent enzyme XOC_4521 PF13291 ACT domain XOC_4523 PF01134 Glucose inhibited division protein A XOC_4523 PF13932 GidA associated domain XOC_4524 PF10127 RNA repair pathway DNA polymerase beta family XOC_4525 PF10127 RNA repair pathway DNA polymerase beta family XOC_4528 PF05598 Transposase domain (DUF772) XOC_4529 PF13276 HTH-like domain XOC_4530 PF01527 Transposase XOC_4531 PF03377 TAL effector repeat XOC_4534 PF00665 Integrase core domain XOC_4534 PF13333 Integrase core domain XOC_4534 PF13276 HTH-like domain XOC_4535 PF05598 Transposase domain (DUF772) XOC_4538 PF07859 alpha/beta hydrolase fold XOC_4540 PF09339 IclR helix-turn-helix domain XOC_4540 PF01614 Bacterial transcriptional regulator XOC_4541 PF02627 Carboxymuconolactone decarboxylase family XOC_4542 PF12146 Serine aminopeptidase, S33 XOC_4543 PF00206 Lyase XOC_4543 PF10397 Adenylosuccinate lyase C-terminus XOC_4545 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal XOC_4545 PF00775 Dioxygenase XOC_4546 PF00108 Thiolase, N-terminal domain XOC_4546 PF02803 Thiolase, C-terminal domain XOC_4547 PF01144 Coenzyme A transferase XOC_4548 PF01144 Coenzyme A transferase XOC_4549 PF00355 Rieske [2Fe-2S] domain XOC_4553 PF02782 FGGY family of carbohydrate kinases, C-terminal domain XOC_4553 PF00370 FGGY family of carbohydrate kinases, N-terminal domain XOC_4554 PF02782 FGGY family of carbohydrate kinases, C-terminal domain XOC_4554 PF00370 FGGY family of carbohydrate kinases, N-terminal domain XOC_4557 PF01494 FAD binding domain XOC_4559 PF00171 Aldehyde dehydrogenase family XOC_4564 PF11871 Domain of unknown function (DUF3391) XOC_4564 PF01966 HD domain XOC_4565 PF07690 Major Facilitator Superfamily XOC_4566 PF00132 Bacterial transferase hexapeptide (six repeats) XOC_4567 PF03692 Putative zinc- or iron-chelating domain XOC_4569 PF00920 Dehydratase family XOC_4570 PF13936 Helix-turn-helix domain XOC_4570 PF00665 Integrase core domain XOC_4575 PF04616 Glycosyl hydrolases family 43 XOC_4581 PF00331 Glycosyl hydrolase family 10 XOC_4581 PF03422 Carbohydrate binding module (family 6) XOC_4581 PF00553 Cellulose binding domain XOC_4582 PF00331 Glycosyl hydrolase family 10 XOC_4582 PF03422 Carbohydrate binding module (family 6) XOC_4582 PF00553 Cellulose binding domain XOC_4583 PF02614 Glucuronate isomerase XOC_4588 PF00326 Prolyl oligopeptidase family XOC_4589 PF02785 Biotin carboxylase C-terminal domain XOC_4589 PF00289 Biotin carboxylase, N-terminal domain XOC_4589 PF00364 Biotin-requiring enzyme XOC_4589 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain XOC_4590 PF01039 Carboxyl transferase domain XOC_4591 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XOC_4591 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XOC_4591 PF02770 Acyl-CoA dehydrogenase, middle domain XOC_4602 PF07683 Cobalamin synthesis protein cobW C-terminal domain XOC_4602 PF02492 CobW/HypB/UreG, nucleotide-binding domain XOC_4606 PF03969 AFG1-like ATPase XOC_4607 PF01047 MarR family XOC_4608 PF02566 OsmC-like protein XOC_4612 PF13340 Putative transposase of IS4/5 family (DUF4096) XOC_4615 PF00248 Aldo/keto reductase family XOC_4616 PF16884 N-terminal domain of oxidoreductase XOC_4616 PF00107 Zinc-binding dehydrogenase XOC_4617 PF00248 Aldo/keto reductase family XOC_4619 PF00849 RNA pseudouridylate synthase XOC_4621 PF00271 Helicase conserved C-terminal domain XOC_4621 PF08482 ATP-dependent helicase C-terminal XOC_4621 PF00270 DEAD/DEAH box helicase XOC_4621 PF04408 Helicase associated domain (HA2) XOC_4623 PF07308 Protein of unknown function (DUF1456) XOC_4624 PF13454 FAD-NAD(P)-binding XOC_4626 PF01014 Uricase XOC_4626 PF09349 OHCU decarboxylase XOC_4629 PF00266 Aminotransferase class-V XOC_4630 PF07687 Peptidase dimerisation domain XOC_4630 PF01546 Peptidase family M20/M25/M40 XOC_4631 PF03466 LysR substrate binding domain XOC_4631 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XOC_4635 PF16197 Ketoacyl-synthetase C-terminal extension XOC_4635 PF00109 Beta-ketoacyl synthase, N-terminal domain XOC_4635 PF00550 Phosphopantetheine attachment site XOC_4635 PF08240 Alcohol dehydrogenase GroES-like domain XOC_4635 PF00698 Acyl transferase domain XOC_4635 PF02801 Beta-ketoacyl synthase, C-terminal domain XOC_4635 PF08659 KR domain XOC_4635 PF14765 Polyketide synthase dehydratase XOC_4636 PF01553 Acyltransferase XOC_4639 PF00356 Bacterial regulatory proteins, lacI family XOC_4642 PF04820 Tryptophan halogenase XOC_4643 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family XOC_4644 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) XOC_4647 PF04337 Protein of unknown function, DUF480 XOC_4650 PF13361 UvrD-like helicase C-terminal domain XOC_4650 PF00580 UvrD/REP helicase N-terminal domain XOC_4651 PF00265 Thymidine kinase XOC_4653 PF04349 Periplasmic glucan biosynthesis protein, MdoG XOC_4658 PF05598 Transposase domain (DUF772) XOC_4658 PF01609 Transposase DDE domain XOC_4663 PF00849 RNA pseudouridylate synthase XOC_4667 PF05598 Transposase domain (DUF772) XOC_4669 PF00990 Diguanylate cyclase, GGDEF domain XOC_4670 PF05651 Putative sugar diacid recognition XOC_4670 PF17853 GGDEF-like domain XOC_4670 PF13556 PucR C-terminal helix-turn-helix domain XOC_4672 PF02595 Glycerate kinase family XOC_4673 PF07690 Major Facilitator Superfamily XOC_4678 PF17785 PUA-like domain XOC_4678 PF10672 S-adenosylmethionine-dependent methyltransferase XOC_4680 PF01694 Rhomboid family XOC_4681 PF03009 Glycerophosphoryl diester phosphodiesterase family XOC_4684 PF01569 PAP2 superfamily XOC_4685 PF01926 50S ribosome-binding GTPase XOC_4685 PF10396 GTP-binding protein TrmE N-terminus XOC_4685 PF12631 MnmE helical domain XOC_4686 PF01522 Polysaccharide deacetylase XOC_4687 PF02096 60Kd inner membrane protein XOC_4687 PF14849 YidC periplasmic domain XOC_4688 PF00825 Ribonuclease P XOC_4689 PF00468 Ribosomal protein L34