locus-tag class description ACU11_00005 PF08299 Bacterial dnaA protein helix-turn-helix ACU11_00005 PF11638 DnaA N-terminal domain ACU11_00005 PF00308 Bacterial dnaA protein ACU11_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain ACU11_00010 PF02767 DNA polymerase III beta subunit, central domain ACU11_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain ACU11_00015 PF02463 RecF/RecN/SMC N terminal domain ACU11_00020 PF00986 DNA gyrase B subunit, carboxyl terminus ACU11_00020 PF18053 DNA gyrase B subunit insert domain ACU11_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU11_00020 PF01751 Toprim domain ACU11_00020 PF00204 DNA gyrase B ACU11_00030 PF01435 Peptidase family M48 ACU11_00040 PF03544 Gram-negative bacterial TonB protein C-terminal ACU11_00045 PF01618 MotA/TolQ/ExbB proton channel family ACU11_00050 PF02472 Biopolymer transport protein ExbD/TolR ACU11_00055 PF02472 Biopolymer transport protein ExbD/TolR ACU11_00060 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ACU11_00070 PF13396 Phospholipase_D-nuclease N-terminal ACU11_00070 PF13091 PLD-like domain ACU11_00100 PF04717 Type VI secretion system, phage-baseplate injector ACU11_00100 PF16671 Actin cross-linking domain ACU11_00140 PF05598 Transposase domain (DUF772) ACU11_00175 PF03412 Peptidase C39 family ACU11_00175 PF00664 ABC transporter transmembrane region ACU11_00175 PF00005 ABC transporter ACU11_00180 PF13276 HTH-like domain ACU11_00185 PF05598 Transposase domain (DUF772) ACU11_00215 PF08240 Alcohol dehydrogenase GroES-like domain ACU11_00215 PF00107 Zinc-binding dehydrogenase ACU11_00220 PF00150 Cellulase (glycosyl hydrolase family 5) ACU11_00225 PF00150 Cellulase (glycosyl hydrolase family 5) ACU11_00230 PF00150 Cellulase (glycosyl hydrolase family 5) ACU11_00240 PF04389 Peptidase family M28 ACU11_00250 PF01551 Peptidase family M23 ACU11_00255 PF03572 Peptidase family S41 ACU11_00255 PF13180 PDZ domain ACU11_00260 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ACU11_00260 PF01842 ACT domain ACU11_00260 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ACU11_00275 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) ACU11_00285 PF04055 Radical SAM superfamily ACU11_00305 PF06827 Zinc finger found in FPG and IleRS ACU11_00305 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ACU11_00305 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ACU11_00315 PF05598 Transposase domain (DUF772) ACU11_00315 PF01609 Transposase DDE domain ACU11_00325 PF01609 Transposase DDE domain ACU11_00325 PF05598 Transposase domain (DUF772) ACU11_00330 PF01070 FMN-dependent dehydrogenase ACU11_00345 PF00348 Polyprenyl synthetase ACU11_00350 PF00067 Cytochrome P450 ACU11_00365 PF00067 Cytochrome P450 ACU11_00370 PF00067 Cytochrome P450 ACU11_00375 PF00067 Cytochrome P450 ACU11_00445 PF01381 Helix-turn-helix ACU11_00450 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB ACU11_00455 PF13538 UvrD-like helicase C-terminal domain ACU11_00460 PF12705 PD-(D/E)XK nuclease superfamily ACU11_00460 PF13361 UvrD-like helicase C-terminal domain ACU11_00460 PF00580 UvrD/REP helicase N-terminal domain ACU11_00465 PF17946 RecC C-terminal domain ACU11_00490 PF00005 ABC transporter ACU11_00495 PF02405 Permease MlaE ACU11_00500 PF02470 MlaD protein ACU11_00505 PF05494 MlaC protein ACU11_00515 PF04333 MlaA lipoprotein ACU11_00520 PF00255 Glutathione peroxidase ACU11_00530 PF02646 RmuC family ACU11_00540 PF13520 Amino acid permease ACU11_00550 PF05598 Transposase domain (DUF772) ACU11_00570 PF00665 Integrase core domain ACU11_00570 PF13936 Helix-turn-helix domain ACU11_00575 PF05598 Transposase domain (DUF772) ACU11_00580 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACU11_00580 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ACU11_00585 PF01493 GXGXG motif ACU11_00585 PF01645 Conserved region in glutamate synthase ACU11_00585 PF00310 Glutamine amidotransferases class-II ACU11_00585 PF04898 Glutamate synthase central domain ACU11_00635 PF00271 Helicase conserved C-terminal domain ACU11_00635 PF09369 Domain of unknown function (DUF1998) ACU11_00635 PF00270 DEAD/DEAH box helicase ACU11_00640 PF03006 Haemolysin-III related ACU11_00660 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain ACU11_00665 PF00155 Aminotransferase class I and II ACU11_00670 PF00593 TonB dependent receptor ACU11_00670 PF07715 TonB-dependent Receptor Plug Domain ACU11_00680 PF01609 Transposase DDE domain ACU11_00680 PF05598 Transposase domain (DUF772) ACU11_00685 PF01070 FMN-dependent dehydrogenase ACU11_00690 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family ACU11_00705 PF12241 Trans-2-enoyl-CoA reductase catalytic region ACU11_00705 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase ACU11_00705 PF07055 Enoyl reductase FAD binding domain ACU11_00710 PF00294 pfkB family carbohydrate kinase ACU11_00725 PF05598 Transposase domain (DUF772) ACU11_00725 PF01609 Transposase DDE domain ACU11_00745 PF08946 Osmosensory transporter coiled coil ACU11_00745 PF00083 Sugar (and other) transporter ACU11_00770 PF00293 NUDIX domain ACU11_00770 PF13344 Haloacid dehalogenase-like hydrolase ACU11_00775 PF05598 Transposase domain (DUF772) ACU11_00780 PF16485 Protealysin propeptide ACU11_00780 PF02868 Thermolysin metallopeptidase, alpha-helical domain ACU11_00780 PF01447 Thermolysin metallopeptidase, catalytic domain ACU11_00800 PF05532 CsbD-like ACU11_00825 PF01609 Transposase DDE domain ACU11_00825 PF05598 Transposase domain (DUF772) ACU11_00850 PF00083 Sugar (and other) transporter ACU11_00875 PF01227 GTP cyclohydrolase I ACU11_00910 PF01925 Sulfite exporter TauE/SafE ACU11_00915 PF02810 SEC-C motif ACU11_00925 PF01263 Aldose 1-epimerase ACU11_00930 PF07690 Major Facilitator Superfamily ACU11_00935 PF01126 Heme oxygenase ACU11_00940 PF00360 Phytochrome region ACU11_00940 PF13426 PAS domain ACU11_00940 PF08446 PAS fold ACU11_00940 PF01590 GAF domain ACU11_00945 PF03594 Benzoate membrane transport protein ACU11_00980 PF01527 Transposase ACU11_00990 PF05598 Transposase domain (DUF772) ACU11_01000 PF05598 Transposase domain (DUF772) ACU11_01010 PF05598 Transposase domain (DUF772) ACU11_01015 PF05598 Transposase domain (DUF772) ACU11_01015 PF01609 Transposase DDE domain ACU11_01025 PF05598 Transposase domain (DUF772) ACU11_01030 PF05598 Transposase domain (DUF772) ACU11_01035 PF00128 Alpha amylase, catalytic domain ACU11_01035 PF11896 Domain of unknown function (DUF3416) ACU11_01040 PF00128 Alpha amylase, catalytic domain ACU11_01040 PF16657 Maltogenic Amylase, C-terminal domain ACU11_01045 PF00128 Alpha amylase, catalytic domain ACU11_01045 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ACU11_01045 PF02806 Alpha amylase, C-terminal all-beta domain ACU11_01060 PF00356 Bacterial regulatory proteins, lacI family ACU11_01080 PF00351 Biopterin-dependent aromatic amino acid hydroxylase ACU11_01085 PF01037 Lrp/AsnC ligand binding domain ACU11_01090 PF07715 TonB-dependent Receptor Plug Domain ACU11_01090 PF00593 TonB dependent receptor ACU11_01095 PF01734 Patatin-like phospholipase ACU11_01100 PF07687 Peptidase dimerisation domain ACU11_01100 PF01546 Peptidase family M20/M25/M40 ACU11_01110 PF00005 ABC transporter ACU11_01125 PF00571 CBS domain ACU11_01125 PF00005 ABC transporter ACU11_01130 PF00528 Binding-protein-dependent transport system inner membrane component ACU11_01140 PF03781 Sulfatase-modifying factor enzyme 1 ACU11_01140 PF12867 DinB superfamily ACU11_01145 PF10017 Histidine-specific methyltransferase, SAM-dependent ACU11_01150 PF07804 HipA-like C-terminal domain ACU11_01150 PF13657 HipA N-terminal domain ACU11_01155 PF01381 Helix-turn-helix ACU11_01175 PF01883 Iron-sulfur cluster assembly protein ACU11_01175 PF10609 NUBPL iron-transfer P-loop NTPase ACU11_01190 PF13091 PLD-like domain ACU11_01195 PF03061 Thioesterase superfamily ACU11_01235 PF02673 Bacitracin resistance protein BacA ACU11_01240 PF03951 Glutamine synthetase, beta-Grasp domain ACU11_01240 PF00120 Glutamine synthetase, catalytic domain ACU11_01245 PF00543 Nitrogen regulatory protein P-II ACU11_01250 PF00909 Ammonium Transporter Family ACU11_01255 PF00989 PAS fold ACU11_01255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU11_01255 PF00512 His Kinase A (phospho-acceptor) domain ACU11_01260 PF02954 Bacterial regulatory protein, Fis family ACU11_01260 PF00072 Response regulator receiver domain ACU11_01260 PF00158 Sigma-54 interaction domain ACU11_01265 PF00080 Copper/zinc superoxide dismutase (SODC) ACU11_01270 PF00080 Copper/zinc superoxide dismutase (SODC) ACU11_01310 PF02803 Thiolase, C-terminal domain ACU11_01310 PF00108 Thiolase, N-terminal domain ACU11_01350 PF00581 Rhodanese-like domain ACU11_01355 PF02556 Preprotein translocase subunit SecB ACU11_01360 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ACU11_01360 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ACU11_01370 PF00205 Thiamine pyrophosphate enzyme, central domain ACU11_01370 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ACU11_01370 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ACU11_01375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU11_01380 PF00072 Response regulator receiver domain ACU11_01380 PF00158 Sigma-54 interaction domain ACU11_01380 PF02954 Bacterial regulatory protein, Fis family ACU11_01395 PF07690 Major Facilitator Superfamily ACU11_01400 PF00588 SpoU rRNA Methylase family ACU11_01415 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ACU11_01415 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ACU11_01420 PF13784 Fic/DOC family N-terminal ACU11_01420 PF02661 Fic/DOC family ACU11_01425 PF00561 alpha/beta hydrolase fold ACU11_01430 PF03692 Putative zinc- or iron-chelating domain ACU11_01435 PF00501 AMP-binding enzyme ACU11_01440 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family ACU11_01455 PF07478 D-ala D-ala ligase C-terminus ACU11_01455 PF01820 D-ala D-ala ligase N-terminus ACU11_01470 PF03109 ABC1 family ACU11_01485 PF00849 RNA pseudouridylate synthase ACU11_01495 PF00472 RF-1 domain ACU11_01510 PF01432 Peptidase family M3 ACU11_01530 PF01011 PQQ enzyme repeat ACU11_01530 PF13570 PQQ-like domain ACU11_01530 PF13360 PQQ-like domain ACU11_01545 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain ACU11_01545 PF06165 Glycosyltransferase family 36 ACU11_01560 PF00512 His Kinase A (phospho-acceptor) domain ACU11_01560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU11_01565 PF02659 Putative manganese efflux pump ACU11_01570 PF09339 IclR helix-turn-helix domain ACU11_01570 PF01614 Bacterial transcriptional regulator ACU11_01590 PF00196 Bacterial regulatory proteins, luxR family ACU11_01590 PF00072 Response regulator receiver domain ACU11_01595 PF00501 AMP-binding enzyme ACU11_01595 PF16177 Acetyl-coenzyme A synthetase N-terminus ACU11_01595 PF13193 AMP-binding enzyme C-terminal domain ACU11_01605 PF04341 Protein of unknown function, DUF485 ACU11_01610 PF00474 Sodium:solute symporter family ACU11_01620 PF03372 Endonuclease/Exonuclease/phosphatase family ACU11_01630 PF04226 Transglycosylase associated protein ACU11_01635 PF01648 4'-phosphopantetheinyl transferase superfamily ACU11_01640 PF09423 PhoD-like phosphatase ACU11_01640 PF16655 PhoD-like phosphatase, N-terminal domain ACU11_01645 PF09423 PhoD-like phosphatase ACU11_01645 PF16655 PhoD-like phosphatase, N-terminal domain ACU11_01650 PF02527 rRNA small subunit methyltransferase G ACU11_01665 PF00830 Ribosomal L28 family ACU11_01670 PF00471 Ribosomal protein L33 ACU11_01675 PF04909 Amidohydrolase ACU11_01680 PF04303 PrpF protein ACU11_01685 PF03737 Aldolase/RraA ACU11_01690 PF03466 LysR substrate binding domain ACU11_01690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACU11_01695 PF13396 Phospholipase_D-nuclease N-terminal ACU11_01695 PF13091 PLD-like domain ACU11_01710 PF13361 UvrD-like helicase C-terminal domain ACU11_01710 PF00580 UvrD/REP helicase N-terminal domain ACU11_01720 PF14602 Hexapeptide repeat of succinyl-transferase ACU11_01720 PF12464 Maltose acetyltransferase ACU11_01765 PF00476 DNA polymerase family A ACU11_01765 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ACU11_01765 PF01612 3'-5' exonuclease ACU11_01765 PF01367 5'-3' exonuclease, C-terminal SAM fold ACU11_01825 PF07977 FabA-like domain ACU11_01830 PF01553 Acyltransferase ACU11_01840 PF00550 Phosphopantetheine attachment site ACU11_01845 PF04820 Tryptophan halogenase ACU11_01880 PF01218 Coproporphyrinogen III oxidase ACU11_01895 PF00535 Glycosyl transferase family 2 ACU11_01905 PF02801 Beta-ketoacyl synthase, C-terminal domain ACU11_01905 PF00109 Beta-ketoacyl synthase, N-terminal domain ACU11_01910 PF05166 YcgL domain ACU11_01925 PF00723 Glycosyl hydrolases family 15 ACU11_01930 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ACU11_01930 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ACU11_01935 PF01609 Transposase DDE domain ACU11_01935 PF05598 Transposase domain (DUF772) ACU11_01955 PF02254 TrkA-N domain ACU11_01955 PF00999 Sodium/hydrogen exchanger family ACU11_01960 PF00571 CBS domain ACU11_01960 PF01769 Divalent cation transporter ACU11_01960 PF03448 MgtE intracellular N domain ACU11_01970 PF13607 Succinyl-CoA ligase like flavodoxin domain ACU11_01970 PF13380 CoA binding domain ACU11_01970 PF00583 Acetyltransferase (GNAT) family ACU11_01980 PF00317 Ribonucleotide reductase, all-alpha domain ACU11_01980 PF03477 ATP cone domain ACU11_01980 PF02867 Ribonucleotide reductase, barrel domain ACU11_01985 PF00268 Ribonucleotide reductase, small chain ACU11_02005 PF13683 Integrase core domain ACU11_02005 PF13276 HTH-like domain ACU11_02010 PF01527 Transposase ACU11_02015 PF03377 TAL effector repeat ACU11_02020 PF03377 TAL effector repeat ACU11_02035 PF05598 Transposase domain (DUF772) ACU11_02045 PF00106 short chain dehydrogenase ACU11_02055 PF06903 VirK protein ACU11_02065 PF00270 DEAD/DEAH box helicase ACU11_02065 PF00271 Helicase conserved C-terminal domain ACU11_02075 PF01609 Transposase DDE domain ACU11_02075 PF05598 Transposase domain (DUF772) ACU11_02090 PF02817 e3 binding domain ACU11_02090 PF00364 Biotin-requiring enzyme ACU11_02090 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ACU11_02100 PF02780 Transketolase, C-terminal domain ACU11_02100 PF02779 Transketolase, pyrimidine binding domain ACU11_02105 PF00676 Dehydrogenase E1 component ACU11_02115 PF03301 Tryptophan 2,3-dioxygenase ACU11_02120 PF00854 POT family ACU11_02130 PF01047 MarR family ACU11_02135 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ACU11_02140 PF01527 Transposase ACU11_02150 PF04209 homogentisate 1,2-dioxygenase ACU11_02155 PF03334 Na+/H+ antiporter subunit ACU11_02160 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) ACU11_02170 PF00361 Proton-conducting membrane transporter ACU11_02175 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ACU11_02180 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ACU11_02180 PF00361 Proton-conducting membrane transporter ACU11_02180 PF13244 Domain of unknown function (DUF4040) ACU11_02180 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter ACU11_02195 PF01447 Thermolysin metallopeptidase, catalytic domain ACU11_02195 PF07504 Fungalysin/Thermolysin Propeptide Motif ACU11_02195 PF02868 Thermolysin metallopeptidase, alpha-helical domain ACU11_02195 PF01483 Proprotein convertase P-domain ACU11_02220 PF03372 Endonuclease/Exonuclease/phosphatase family ACU11_02225 PF07690 Major Facilitator Superfamily ACU11_02235 PF03702 Anhydro-N-acetylmuramic acid kinase ACU11_02245 PF04225 Opacity-associated protein A LysM-like domain ACU11_02245 PF01551 Peptidase family M23 ACU11_02250 PF00579 tRNA synthetases class I (W and Y) ACU11_02280 PF01527 Transposase ACU11_02295 PF00171 Aldehyde dehydrogenase family ACU11_02295 PF01619 Proline dehydrogenase ACU11_02295 PF14850 DNA-binding domain of Proline dehydrogenase ACU11_02295 PF18327 Proline utilization A proline dehydrogenase N-terminal domain ACU11_02305 PF02790 Cytochrome C oxidase subunit II, transmembrane domain ACU11_02305 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ACU11_02310 PF00115 Cytochrome C and Quinol oxidase polypeptide I ACU11_02320 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 ACU11_02325 PF00510 Cytochrome c oxidase subunit III ACU11_02350 PF01040 UbiA prenyltransferase family ACU11_02360 PF13593 SBF-like CPA transporter family (DUF4137) ACU11_02370 PF08278 DNA primase DnaG DnaB-binding ACU11_02370 PF10410 DnaB-helicase binding domain of primase ACU11_02370 PF08275 DNA primase catalytic core, N-terminal domain ACU11_02370 PF01807 CHC2 zinc finger ACU11_02375 PF03631 Virulence factor BrkB ACU11_02380 PF09424 Yqey-like protein ACU11_02385 PF01165 Ribosomal protein S21 ACU11_02390 PF00814 Glycoprotease family ACU11_02395 PF02152 Dihydroneopterin aldolase ACU11_02400 PF01915 Glycosyl hydrolase family 3 C-terminal domain ACU11_02400 PF00933 Glycosyl hydrolase family 3 N terminal domain ACU11_02400 PF14310 Fibronectin type III-like domain ACU11_02410 PF07995 Glucose / Sorbosone dehydrogenase ACU11_02415 PF05360 yiaA/B two helix domain ACU11_02430 PF13520 Amino acid permease ACU11_02440 PF13378 Enolase C-terminal domain-like ACU11_02440 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ACU11_02450 PF01510 N-acetylmuramoyl-L-alanine amidase ACU11_02455 PF01427 D-ala-D-ala dipeptidase ACU11_02495 PF07063 Domain of unknown function (DUF1338) ACU11_02520 PF00873 AcrB/AcrD/AcrF family ACU11_02525 PF00873 AcrB/AcrD/AcrF family ACU11_02530 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ACU11_02535 PF07687 Peptidase dimerisation domain ACU11_02535 PF01546 Peptidase family M20/M25/M40 ACU11_02545 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term ACU11_02545 PF14489 QueF-like protein ACU11_02560 PF03971 Monomeric isocitrate dehydrogenase ACU11_02575 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ACU11_02575 PF07498 Rho termination factor, N-terminal domain ACU11_02575 PF07497 Rho termination factor, RNA-binding domain ACU11_02580 PF00085 Thioredoxin ACU11_02585 PF00271 Helicase conserved C-terminal domain ACU11_02585 PF00270 DEAD/DEAH box helicase ACU11_02585 PF12300 ATP-dependent RNA helicase RhlB ACU11_02590 PF00005 ABC transporter ACU11_02595 PF18075 FtsX extracellular domain ACU11_02600 PF01339 CheB methylesterase ACU11_02600 PF00072 Response regulator receiver domain ACU11_02605 PF03167 Uracil DNA glycosylase superfamily ACU11_02610 PF04542 Sigma-70 region 2 ACU11_02610 PF04545 Sigma-70, region 4 ACU11_02615 PF03458 UPF0126 domain ACU11_02645 PF00166 Chaperonin 10 Kd subunit ACU11_02650 PF00118 TCP-1/cpn60 chaperonin family ACU11_02660 PF00593 TonB dependent receptor ACU11_02660 PF07715 TonB-dependent Receptor Plug Domain ACU11_02665 PF00793 DAHP synthetase I family ACU11_02685 PF01527 Transposase ACU11_02690 PF13683 Integrase core domain ACU11_02690 PF13276 HTH-like domain ACU11_02700 PF00106 short chain dehydrogenase ACU11_02735 PF07759 Protein of unknown function (DUF1615) ACU11_02745 PF00892 EamA-like transporter family ACU11_02750 PF03330 Lytic transglycolase ACU11_02765 PF05598 Transposase domain (DUF772) ACU11_02770 PF05598 Transposase domain (DUF772) ACU11_02775 PF05598 Transposase domain (DUF772) ACU11_02780 PF00324 Amino acid permease ACU11_02790 PF01544 CorA-like Mg2+ transporter protein ACU11_02815 PF01204 Trehalase ACU11_02845 PF00563 EAL domain ACU11_02845 PF00990 Diguanylate cyclase, GGDEF domain ACU11_02845 PF03707 Bacterial signalling protein N terminal repeat ACU11_02860 PF00916 Sulfate permease family ACU11_02860 PF01740 STAS domain ACU11_02875 PF13632 Glycosyl transferase family group 2 ACU11_02885 PF07694 5TMR of 5TMR-LYT ACU11_02885 PF06580 Histidine kinase ACU11_02890 PF00072 Response regulator receiver domain ACU11_02890 PF04397 LytTr DNA-binding domain ACU11_02895 PF03900 Porphobilinogen deaminase, C-terminal domain ACU11_02895 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ACU11_02920 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ACU11_02920 PF00326 Prolyl oligopeptidase family ACU11_02930 PF00155 Aminotransferase class I and II ACU11_02935 PF00326 Prolyl oligopeptidase family ACU11_02935 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ACU11_02940 PF04304 Protein of unknown function (DUF454) ACU11_02950 PF01678 Diaminopimelate epimerase ACU11_02960 PF00589 Phage integrase family ACU11_02960 PF02899 Phage integrase, N-terminal SAM-like domain ACU11_02965 PF00227 Proteasome subunit ACU11_02970 PF00004 ATPase family associated with various cellular activities (AAA) ACU11_02970 PF10431 C-terminal, D2-small domain, of ClpB protein ACU11_02970 PF07724 AAA domain (Cdc48 subfamily) ACU11_02980 PF13673 Acetyltransferase (GNAT) domain ACU11_02985 PF13533 Biotin-lipoyl like ACU11_02995 PF01209 ubiE/COQ5 methyltransferase family ACU11_03000 PF00563 EAL domain ACU11_03000 PF00990 Diguanylate cyclase, GGDEF domain ACU11_03000 PF03707 Bacterial signalling protein N terminal repeat ACU11_03005 PF01433 Peptidase family M1 domain ACU11_03005 PF11838 ERAP1-like C-terminal domain ACU11_03020 PF00294 pfkB family carbohydrate kinase ACU11_03050 PF00905 Penicillin binding protein transpeptidase domain ACU11_03050 PF03717 Penicillin-binding Protein dimerisation domain ACU11_03055 PF01098 Cell cycle protein ACU11_03070 PF13406 Transglycosylase SLT domain ACU11_03075 PF03330 Lytic transglycolase ACU11_03075 PF05036 Sporulation related domain ACU11_03085 PF00768 D-alanyl-D-alanine carboxypeptidase ACU11_03085 PF07943 Penicillin-binding protein 5, C-terminal domain ACU11_03095 PF04359 Protein of unknown function (DUF493) ACU11_03100 PF03099 Biotin/lipoate A/B protein ligase family ACU11_03105 PF04055 Radical SAM superfamily ACU11_03105 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family ACU11_03110 PF11818 C-terminal domain of tail specific protease (DUF3340) ACU11_03110 PF17804 Tail specific protease N-terminal domain ACU11_03110 PF03572 Peptidase family S41 ACU11_03110 PF00595 PDZ domain ACU11_03120 PF01467 Cytidylyltransferase-like ACU11_03120 PF00293 NUDIX domain ACU11_03160 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ACU11_03160 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ACU11_03170 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ACU11_03170 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ACU11_03175 PF04972 BON domain ACU11_03180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU11_03180 PF00360 Phytochrome region ACU11_03180 PF08446 PAS fold ACU11_03180 PF00512 His Kinase A (phospho-acceptor) domain ACU11_03180 PF01590 GAF domain ACU11_03185 PF00072 Response regulator receiver domain ACU11_03190 PF00512 His Kinase A (phospho-acceptor) domain ACU11_03190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU11_03195 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ACU11_03225 PF02837 Glycosyl hydrolases family 2, sugar binding domain ACU11_03225 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ACU11_03225 PF00703 Glycosyl hydrolases family 2 ACU11_03225 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 ACU11_03225 PF16355 Domain of unknown function (DUF4982) ACU11_03245 PF07690 Major Facilitator Superfamily ACU11_03250 PF00356 Bacterial regulatory proteins, lacI family ACU11_03255 PF01380 SIS domain ACU11_03260 PF01979 Amidohydrolase family ACU11_03270 PF00535 Glycosyl transferase family 2 ACU11_03275 PF14883 Hypothetical glycosyl hydrolase family 13 ACU11_03275 PF01522 Polysaccharide deacetylase ACU11_03285 PF00665 Integrase core domain ACU11_03285 PF13936 Helix-turn-helix domain ACU11_03290 PF01966 HD domain ACU11_03290 PF12627 Probable RNA and SrmB- binding site of polymerase A ACU11_03290 PF01743 Poly A polymerase head domain ACU11_03300 PF00171 Aldehyde dehydrogenase family ACU11_03325 PF00034 Cytochrome c ACU11_03330 PF01926 50S ribosome-binding GTPase ACU11_03340 PF04107 Glutamate-cysteine ligase family 2(GCS2) ACU11_03350 PF05598 Transposase domain (DUF772) ACU11_03370 PF05598 Transposase domain (DUF772) ACU11_03370 PF01609 Transposase DDE domain ACU11_03380 PF00672 HAMP domain ACU11_03380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU11_03380 PF00512 His Kinase A (phospho-acceptor) domain ACU11_03380 PF16527 Two-component sensor protein CpxA, periplasmic domain ACU11_03385 PF00486 Transcriptional regulatory protein, C terminal ACU11_03385 PF00072 Response regulator receiver domain ACU11_03395 PF02583 Metal-sensitive transcriptional repressor ACU11_03400 PF08240 Alcohol dehydrogenase GroES-like domain ACU11_03400 PF00107 Zinc-binding dehydrogenase ACU11_03410 PF00756 Putative esterase ACU11_03430 PF12848 ABC transporter ACU11_03430 PF00005 ABC transporter ACU11_03450 PF00464 Serine hydroxymethyltransferase ACU11_03460 PF03477 ATP cone domain ACU11_03470 PF01872 RibD C-terminal domain ACU11_03470 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ACU11_03475 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ACU11_03475 PF01872 RibD C-terminal domain ACU11_03485 PF00677 Lumazine binding domain ACU11_03490 PF00925 GTP cyclohydrolase II ACU11_03490 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ACU11_03495 PF00885 6,7-dimethyl-8-ribityllumazine synthase ACU11_03500 PF01029 NusB family ACU11_03505 PF00586 AIR synthase related protein, N-terminal domain ACU11_03505 PF02769 AIR synthase related protein, C-terminal domain ACU11_03530 PF03814 Potassium-transporting ATPase A subunit ACU11_03540 PF02669 K+-transporting ATPase, c chain ACU11_03545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU11_03545 PF13493 Domain of unknown function (DUF4118) ACU11_03545 PF13492 GAF domain ACU11_03545 PF02702 Osmosensitive K+ channel His kinase sensor domain ACU11_03545 PF00512 His Kinase A (phospho-acceptor) domain ACU11_03550 PF00486 Transcriptional regulatory protein, C terminal ACU11_03550 PF00072 Response regulator receiver domain ACU11_03555 PF01565 FAD binding domain ACU11_03555 PF02913 FAD linked oxidases, C-terminal domain ACU11_03560 PF04307 LexA-binding, inner membrane-associated putative hydrolase ACU11_03565 PF02021 Uncharacterised protein family UPF0102 ACU11_03575 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ACU11_03595 PF02381 MraZ protein, putative antitoxin-like ACU11_03600 PF01795 MraW methylase family ACU11_03605 PF04999 Cell division protein FtsL ACU11_03610 PF00905 Penicillin binding protein transpeptidase domain ACU11_03610 PF03717 Penicillin-binding Protein dimerisation domain ACU11_03615 PF08245 Mur ligase middle domain ACU11_03615 PF02875 Mur ligase family, glutamate ligase domain ACU11_03615 PF01225 Mur ligase family, catalytic domain ACU11_03620 PF08245 Mur ligase middle domain ACU11_03620 PF01225 Mur ligase family, catalytic domain ACU11_03620 PF02875 Mur ligase family, glutamate ligase domain ACU11_03625 PF00953 Glycosyl transferase family 4 ACU11_03630 PF01098 Cell cycle protein ACU11_03635 PF04101 Glycosyltransferase family 28 C-terminal domain ACU11_03635 PF03033 Glycosyltransferase family 28 N-terminal domain ACU11_03640 PF08245 Mur ligase middle domain ACU11_03640 PF02875 Mur ligase family, glutamate ligase domain ACU11_03640 PF01225 Mur ligase family, catalytic domain ACU11_03645 PF01820 D-ala D-ala ligase N-terminus ACU11_03645 PF07478 D-ala D-ala ligase C-terminus ACU11_03650 PF03799 Cell division protein FtsQ ACU11_03650 PF08478 POTRA domain, FtsQ-type ACU11_03655 PF02491 SHS2 domain inserted in FTSA ACU11_03660 PF12327 FtsZ family, C-terminal domain ACU11_03660 PF00091 Tubulin/FtsZ family, GTPase domain ACU11_03665 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ACU11_03675 PF01551 Peptidase family M23 ACU11_03675 PF01476 LysM domain ACU11_03680 PF07516 SecA Wing and Scaffold domain ACU11_03680 PF02810 SEC-C motif ACU11_03680 PF01043 SecA preprotein cross-linking domain ACU11_03680 PF07517 SecA DEAD-like domain ACU11_03690 PF00293 NUDIX domain ACU11_03700 PF02219 Methylenetetrahydrofolate reductase ACU11_03710 PF08240 Alcohol dehydrogenase GroES-like domain ACU11_03710 PF00698 Acyl transferase domain ACU11_03710 PF00109 Beta-ketoacyl synthase, N-terminal domain ACU11_03710 PF02801 Beta-ketoacyl synthase, C-terminal domain ACU11_03710 PF08659 KR domain ACU11_03710 PF00550 Phosphopantetheine attachment site ACU11_03710 PF14765 Polyketide synthase dehydratase ACU11_03710 PF16197 Ketoacyl-synthetase C-terminal extension ACU11_03710 PF00107 Zinc-binding dehydrogenase ACU11_03715 PF09286 Pro-kumamolisin, activation domain ACU11_03715 PF00082 Subtilase family ACU11_03725 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ACU11_03755 PF13649 Methyltransferase domain ACU11_03760 PF05221 S-adenosyl-L-homocysteine hydrolase ACU11_03760 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ACU11_03770 PF00311 Phosphoenolpyruvate carboxylase ACU11_03795 PF00328 Histidine phosphatase superfamily (branch 2) ACU11_03800 PF02773 S-adenosylmethionine synthetase, C-terminal domain ACU11_03800 PF02772 S-adenosylmethionine synthetase, central domain ACU11_03800 PF00438 S-adenosylmethionine synthetase, N-terminal domain ACU11_03815 PF01207 Dihydrouridine synthase (Dus) ACU11_03830 PF00294 pfkB family carbohydrate kinase ACU11_03835 PF01773 Na+ dependent nucleoside transporter N-terminus ACU11_03835 PF07662 Na+ dependent nucleoside transporter C-terminus ACU11_03835 PF07670 Nucleoside recognition ACU11_03850 PF00248 Aldo/keto reductase family ACU11_03885 PF02668 Taurine catabolism dioxygenase TauD, TfdA family ACU11_03895 PF00005 ABC transporter ACU11_03900 PF13472 GDSL-like Lipase/Acylhydrolase family ACU11_03905 PF00486 Transcriptional regulatory protein, C terminal ACU11_03905 PF00072 Response regulator receiver domain ACU11_03910 PF08521 Two-component sensor kinase N-terminal ACU11_03910 PF00512 His Kinase A (phospho-acceptor) domain ACU11_03910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU11_03920 PF01219 Prokaryotic diacylglycerol kinase ACU11_03940 PF01790 Prolipoprotein diacylglyceryl transferase ACU11_03945 PF00303 Thymidylate synthase ACU11_03955 PF00186 Dihydrofolate reductase ACU11_03960 PF00149 Calcineurin-like phosphoesterase ACU11_03965 PF04379 ApaG domain ACU11_03970 PF00398 Ribosomal RNA adenine dimethylase ACU11_03975 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ACU11_03980 PF09312 SurA N-terminal domain ACU11_03980 PF00639 PPIC-type PPIASE domain ACU11_03985 PF03968 OstA-like protein ACU11_03985 PF04453 LPS transport system D ACU11_03990 PF00850 Histone deacetylase domain ACU11_03995 PF01923 Cobalamin adenosyltransferase ACU11_04005 PF01494 FAD binding domain ACU11_04010 PF01494 FAD binding domain ACU11_04035 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ACU11_04040 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit ACU11_04040 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ACU11_04045 PF03466 LysR substrate binding domain ACU11_04045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACU11_04050 PF13193 AMP-binding enzyme C-terminal domain ACU11_04050 PF00501 AMP-binding enzyme ACU11_04055 PF00171 Aldehyde dehydrogenase family ACU11_04060 PF00378 Enoyl-CoA hydratase/isomerase ACU11_04080 PF08450 SMP-30/Gluconolactonase/LRE-like region ACU11_04085 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ACU11_04085 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ACU11_04090 PF18125 RlmM ferredoxin-like domain ACU11_04090 PF01728 FtsJ-like methyltransferase ACU11_04105 PF00892 EamA-like transporter family ACU11_04110 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ACU11_04110 PF00749 tRNA synthetases class I (E and Q), catalytic domain ACU11_04130 PF00990 Diguanylate cyclase, GGDEF domain ACU11_04130 PF00072 Response regulator receiver domain ACU11_04135 PF00196 Bacterial regulatory proteins, luxR family ACU11_04135 PF00072 Response regulator receiver domain ACU11_04145 PF01625 Peptide methionine sulfoxide reductase ACU11_04150 PF00923 Transaldolase/Fructose-6-phosphate aldolase ACU11_04160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACU11_04160 PF03466 LysR substrate binding domain ACU11_04165 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACU11_04165 PF13192 Thioredoxin domain ACU11_04170 PF10417 C-terminal domain of 1-Cys peroxiredoxin ACU11_04170 PF00578 AhpC/TSA family ACU11_04175 PF05175 Methyltransferase small domain ACU11_04175 PF17827 PrmC N-terminal domain ACU11_04190 PF00561 alpha/beta hydrolase fold ACU11_04200 PF00293 NUDIX domain ACU11_04205 PF01612 3'-5' exonuclease ACU11_04205 PF01367 5'-3' exonuclease, C-terminal SAM fold ACU11_04205 PF00476 DNA polymerase family A ACU11_04205 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ACU11_04220 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch ACU11_04220 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ACU11_04220 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ACU11_04240 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch ACU11_04245 PF02233 NAD(P) transhydrogenase beta subunit ACU11_04260 PF01063 Amino-transferase class IV ACU11_04265 PF04151 Bacterial pre-peptidase C-terminal domain ACU11_04265 PF00082 Subtilase family ACU11_04270 PF04073 Aminoacyl-tRNA editing domain ACU11_04290 PF03358 NADPH-dependent FMN reductase ACU11_04295 PF03631 Virulence factor BrkB ACU11_04300 PF08534 Redoxin ACU11_04305 PF00708 Acylphosphatase ACU11_04315 PF03976 Polyphosphate kinase 2 (PPK2) ACU11_04320 PF00994 Probable molybdopterin binding domain ACU11_04330 PF03462 PCRF domain ACU11_04330 PF00472 RF-1 domain ACU11_04335 PF01488 Shikimate / quinate 5-dehydrogenase ACU11_04335 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ACU11_04335 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ACU11_04345 PF03550 Outer membrane lipoprotein LolB ACU11_04350 PF08544 GHMP kinases C terminal ACU11_04350 PF00288 GHMP kinases N terminal domain ACU11_04360 PF14572 Phosphoribosyl synthetase-associated domain ACU11_04360 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ACU11_04365 PF01386 Ribosomal L25p family ACU11_04365 PF14693 Ribosomal protein TL5, C-terminal domain ACU11_04370 PF01195 Peptidyl-tRNA hydrolase ACU11_04375 PF06071 Protein of unknown function (DUF933) ACU11_04375 PF01926 50S ribosome-binding GTPase ACU11_04395 PF03143 Elongation factor Tu C-terminal domain ACU11_04395 PF03144 Elongation factor Tu domain 2 ACU11_04395 PF00009 Elongation factor Tu GTP binding domain ACU11_04405 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ACU11_04410 PF02357 Transcription termination factor nusG ACU11_04410 PF00467 KOW motif ACU11_04415 PF00298 Ribosomal protein L11, RNA binding domain ACU11_04415 PF03946 Ribosomal protein L11, N-terminal domain ACU11_04420 PF00687 Ribosomal protein L1p/L10e family ACU11_04425 PF00466 Ribosomal protein L10 ACU11_04430 PF16320 Ribosomal protein L7/L12 dimerisation domain ACU11_04430 PF00542 Ribosomal protein L7/L12 C-terminal domain ACU11_04435 PF00562 RNA polymerase Rpb2, domain 6 ACU11_04435 PF04560 RNA polymerase Rpb2, domain 7 ACU11_04435 PF10385 RNA polymerase beta subunit external 1 domain ACU11_04435 PF04565 RNA polymerase Rpb2, domain 3 ACU11_04435 PF04561 RNA polymerase Rpb2, domain 2 ACU11_04435 PF04563 RNA polymerase beta subunit ACU11_04440 PF00623 RNA polymerase Rpb1, domain 2 ACU11_04440 PF04998 RNA polymerase Rpb1, domain 5 ACU11_04440 PF05000 RNA polymerase Rpb1, domain 4 ACU11_04440 PF04983 RNA polymerase Rpb1, domain 3 ACU11_04440 PF04997 RNA polymerase Rpb1, domain 1 ACU11_04445 PF00164 Ribosomal protein S12/S23 ACU11_04450 PF00177 Ribosomal protein S7p/S5e ACU11_04455 PF00679 Elongation factor G C-terminus ACU11_04455 PF03144 Elongation factor Tu domain 2 ACU11_04455 PF00009 Elongation factor Tu GTP binding domain ACU11_04455 PF03764 Elongation factor G, domain IV ACU11_04455 PF14492 Elongation Factor G, domain II ACU11_04460 PF00009 Elongation factor Tu GTP binding domain ACU11_04460 PF03143 Elongation factor Tu C-terminal domain ACU11_04460 PF03144 Elongation factor Tu domain 2 ACU11_04470 PF00338 Ribosomal protein S10p/S20e ACU11_04475 PF00297 Ribosomal protein L3 ACU11_04480 PF00573 Ribosomal protein L4/L1 family ACU11_04485 PF00276 Ribosomal protein L23 ACU11_04490 PF00181 Ribosomal Proteins L2, RNA binding domain ACU11_04490 PF03947 Ribosomal Proteins L2, C-terminal domain ACU11_04495 PF00203 Ribosomal protein S19 ACU11_04500 PF00237 Ribosomal protein L22p/L17e ACU11_04505 PF00189 Ribosomal protein S3, C-terminal domain ACU11_04505 PF07650 KH domain ACU11_04510 PF00252 Ribosomal protein L16p/L10e ACU11_04515 PF00831 Ribosomal L29 protein ACU11_04520 PF00366 Ribosomal protein S17 ACU11_04525 PF00238 Ribosomal protein L14p/L23e ACU11_04530 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ACU11_04530 PF00467 KOW motif ACU11_04535 PF00281 Ribosomal protein L5 ACU11_04535 PF00673 ribosomal L5P family C-terminus ACU11_04540 PF00253 Ribosomal protein S14p/S29e ACU11_04545 PF00410 Ribosomal protein S8 ACU11_04550 PF00347 Ribosomal protein L6 ACU11_04555 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ACU11_04560 PF03719 Ribosomal protein S5, C-terminal domain ACU11_04560 PF00333 Ribosomal protein S5, N-terminal domain ACU11_04565 PF00327 Ribosomal protein L30p/L7e ACU11_04570 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ACU11_04575 PF00344 SecY translocase ACU11_04580 PF00416 Ribosomal protein S13/S18 ACU11_04585 PF00411 Ribosomal protein S11 ACU11_04590 PF01479 S4 domain ACU11_04590 PF00163 Ribosomal protein S4/S9 N-terminal domain ACU11_04595 PF01000 RNA polymerase Rpb3/RpoA insert domain ACU11_04595 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ACU11_04595 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ACU11_04600 PF01196 Ribosomal protein L17 ACU11_04605 PF02600 Disulfide bond formation protein DsbB ACU11_04620 PF01474 Class-II DAHP synthetase family ACU11_04645 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ACU11_04650 PF00056 lactate/malate dehydrogenase, NAD binding domain ACU11_04650 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ACU11_04655 PF13333 Integrase core domain ACU11_04655 PF13276 HTH-like domain ACU11_04655 PF00665 Integrase core domain ACU11_04660 PF01527 Transposase ACU11_04675 PF05598 Transposase domain (DUF772) ACU11_04675 PF01609 Transposase DDE domain ACU11_04685 PF03009 Glycerophosphoryl diester phosphodiesterase family ACU11_04695 PF00480 ROK family ACU11_04705 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACU11_04705 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ACU11_04710 PF00107 Zinc-binding dehydrogenase ACU11_04710 PF08240 Alcohol dehydrogenase GroES-like domain ACU11_04715 PF05736 OprF membrane domain ACU11_04715 PF00691 OmpA family ACU11_04725 PF00849 RNA pseudouridylate synthase ACU11_04735 PF00155 Aminotransferase class I and II ACU11_04745 PF00528 Binding-protein-dependent transport system inner membrane component ACU11_04750 PF00528 Binding-protein-dependent transport system inner membrane component ACU11_04755 PF17850 CysA C-terminal regulatory domain ACU11_04755 PF00005 ABC transporter ACU11_04755 PF12857 TOBE-like domain ACU11_04765 PF08240 Alcohol dehydrogenase GroES-like domain ACU11_04765 PF00107 Zinc-binding dehydrogenase ACU11_04775 PF04185 Phosphoesterase family ACU11_04775 PF05506 Domain of unknown function (DUF756) ACU11_04785 PF10459 Peptidase S46 ACU11_04790 PF00300 Histidine phosphatase superfamily (branch 1) ACU11_04795 PF08245 Mur ligase middle domain ACU11_04795 PF02875 Mur ligase family, glutamate ligase domain ACU11_04810 PF00156 Phosphoribosyl transferase domain ACU11_04815 PF04305 Protein of unknown function (DUF455) ACU11_04835 PF00149 Calcineurin-like phosphoesterase ACU11_04840 PF01569 PAP2 superfamily ACU11_04845 PF00534 Glycosyl transferases group 1 ACU11_04845 PF13439 Glycosyltransferase Family 4 ACU11_04850 PF02541 Ppx/GppA phosphatase family ACU11_04855 PF17941 Polyphosphate kinase C-terminal domain 1 ACU11_04855 PF02503 Polyphosphate kinase middle domain ACU11_04855 PF13090 Polyphosphate kinase C-terminal domain 2 ACU11_04855 PF13089 Polyphosphate kinase N-terminal domain ACU11_04860 PF00989 PAS fold ACU11_04860 PF11808 Phosphate regulon sensor protein PhoR ACU11_04860 PF00512 His Kinase A (phospho-acceptor) domain ACU11_04860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU11_04865 PF00486 Transcriptional regulatory protein, C terminal ACU11_04865 PF00072 Response regulator receiver domain ACU11_04870 PF01435 Peptidase family M48 ACU11_04870 PF13181 Tetratricopeptide repeat ACU11_04875 PF00462 Glutaredoxin ACU11_04885 PF18324 Hypothetical protein TT1725 ACU11_04885 PF00180 Isocitrate/isopropylmalate dehydrogenase ACU11_04915 PF13276 HTH-like domain ACU11_04915 PF13683 Integrase core domain ACU11_04920 PF01527 Transposase ACU11_04935 PF05697 Bacterial trigger factor protein (TF) ACU11_04935 PF05698 Bacterial trigger factor protein (TF) C-terminus ACU11_04940 PF00574 Clp protease ACU11_04945 PF07724 AAA domain (Cdc48 subfamily) ACU11_04945 PF10431 C-terminal, D2-small domain, of ClpB protein ACU11_04945 PF06689 ClpX C4-type zinc finger ACU11_04950 PF00004 ATPase family associated with various cellular activities (AAA) ACU11_04950 PF05362 Lon protease (S16) C-terminal proteolytic domain ACU11_04950 PF02190 ATP-dependent protease La (LON) substrate-binding domain ACU11_04955 PF00216 Bacterial DNA-binding protein ACU11_04980 PF01476 LysM domain ACU11_04980 PF05257 CHAP domain ACU11_04985 PF16123 Hydroxyacylglutathione hydrolase C-terminus ACU11_04985 PF00753 Metallo-beta-lactamase superfamily ACU11_04995 PF00075 RNase H ACU11_05000 PF00929 Exonuclease ACU11_05055 PF00772 DnaB-like helicase N terminal domain ACU11_05055 PF03796 DnaB-like helicase C terminal domain ACU11_05110 PF03354 Phage Terminase ACU11_05115 PF04860 Phage portal protein ACU11_05120 PF00574 Clp protease ACU11_05210 PF04717 Type VI secretion system, phage-baseplate injector ACU11_05210 PF16671 Actin cross-linking domain ACU11_05245 PF00589 Phage integrase family ACU11_05245 PF13356 Arm DNA-binding domain ACU11_05255 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ACU11_05265 PF00753 Metallo-beta-lactamase superfamily ACU11_05265 PF12706 Beta-lactamase superfamily domain ACU11_05270 PF04055 Radical SAM superfamily ACU11_05270 PF06463 Molybdenum Cofactor Synthesis C ACU11_05280 PF01967 MoaC family ACU11_05285 PF02597 ThiS family ACU11_05290 PF02391 MoaE protein ACU11_05300 PF12169 DNA polymerase III subunits gamma and tau domain III ACU11_05300 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding ACU11_05300 PF12170 DNA polymerase III tau subunit V interacting with alpha ACU11_05305 PF02575 YbaB/EbfC DNA-binding family ACU11_05310 PF02132 RecR protein ACU11_05310 PF13662 Toprim domain ACU11_05315 PF01230 HIT domain ACU11_05325 PF11992 Domain of unknown function (DUF3488) ACU11_05325 PF01841 Transglutaminase-like superfamily ACU11_05325 PF13559 Domain of unknown function (DUF4129) ACU11_05335 PF07726 ATPase family associated with various cellular activities (AAA) ACU11_05335 PF17863 AAA lid domain ACU11_05350 PF02545 Maf-like protein ACU11_05355 PF02620 Large ribosomal RNA subunit accumulation protein YceD ACU11_05360 PF01783 Ribosomal L32p protein family ACU11_05365 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ACU11_05365 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ACU11_05375 PF00698 Acyl transferase domain ACU11_05385 PF00550 Phosphopantetheine attachment site ACU11_05390 PF02801 Beta-ketoacyl synthase, C-terminal domain ACU11_05390 PF00109 Beta-ketoacyl synthase, N-terminal domain ACU11_05395 PF00425 chorismate binding enzyme ACU11_05395 PF04715 Anthranilate synthase component I, N terminal region ACU11_05400 PF02618 YceG-like family ACU11_05405 PF09115 DNA polymerase III, delta subunit, C terminal ACU11_05430 PF02954 Bacterial regulatory protein, Fis family ACU11_05430 PF06506 Propionate catabolism activator ACU11_05430 PF00158 Sigma-54 interaction domain ACU11_05440 PF00285 Citrate synthase, C-terminal domain ACU11_05445 PF00330 Aconitase family (aconitate hydratase) ACU11_05445 PF00694 Aconitase C-terminal domain ACU11_05450 PF04303 PrpF protein ACU11_05455 PF07715 TonB-dependent Receptor Plug Domain ACU11_05455 PF00593 TonB dependent receptor ACU11_05490 PF08534 Redoxin ACU11_05500 PF01556 DnaJ C terminal domain ACU11_05500 PF00226 DnaJ domain ACU11_05505 PF00072 Response regulator receiver domain ACU11_05510 PF12221 Bacterial membrane protein N terminal ACU11_05510 PF01145 SPFH domain / Band 7 family ACU11_05515 PF01145 SPFH domain / Band 7 family ACU11_05525 PF00709 Adenylosuccinate synthetase ACU11_05530 PF01433 Peptidase family M1 domain ACU11_05530 PF11838 ERAP1-like C-terminal domain ACU11_05545 PF00440 Bacterial regulatory proteins, tetR family ACU11_05560 PF01420 Type I restriction modification DNA specificity domain ACU11_05565 PF02384 N-6 DNA Methylase ACU11_05575 PF00271 Helicase conserved C-terminal domain ACU11_05575 PF04851 Type III restriction enzyme, res subunit ACU11_05575 PF08463 EcoEI R protein C-terminal ACU11_05575 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) ACU11_05590 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) ACU11_05590 PF00271 Helicase conserved C-terminal domain ACU11_05590 PF08463 EcoEI R protein C-terminal ACU11_05590 PF04851 Type III restriction enzyme, res subunit ACU11_05605 PF12161 HsdM N-terminal domain ACU11_05605 PF02384 N-6 DNA Methylase ACU11_05610 PF01420 Type I restriction modification DNA specificity domain ACU11_05645 PF13456 Reverse transcriptase-like ACU11_05645 PF00300 Histidine phosphatase superfamily (branch 1) ACU11_05650 PF01256 Carbohydrate kinase ACU11_05670 PF01726 LexA DNA binding domain ACU11_05670 PF00717 Peptidase S24-like ACU11_05685 PF02811 PHP domain ACU11_05685 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ACU11_05685 PF07733 Bacterial DNA polymerase III alpha NTPase domain ACU11_05685 PF14579 Helix-hairpin-helix motif ACU11_05700 PF03169 OPT oligopeptide transporter protein ACU11_05710 PF05598 Transposase domain (DUF772) ACU11_05715 PF07676 WD40-like Beta Propeller Repeat ACU11_05715 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region ACU11_05715 PF00326 Prolyl oligopeptidase family ACU11_05725 PF12833 Helix-turn-helix domain ACU11_05725 PF02311 AraC-like ligand binding domain ACU11_05745 PF00199 Catalase ACU11_05745 PF06628 Catalase-related immune-responsive ACU11_05745 PF18011 C-terminal domain found in long catalases ACU11_05770 PF02347 Glycine cleavage system P-protein ACU11_05785 PF00664 ABC transporter transmembrane region ACU11_05785 PF00005 ABC transporter ACU11_05785 PF03412 Peptidase C39 family ACU11_05810 PF08019 Phosphoethanolamine transferase EptA/EptB ACU11_05810 PF00884 Sulfatase ACU11_05820 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase ACU11_05825 PF00486 Transcriptional regulatory protein, C terminal ACU11_05825 PF00072 Response regulator receiver domain ACU11_05830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU11_05830 PF08521 Two-component sensor kinase N-terminal ACU11_05830 PF00512 His Kinase A (phospho-acceptor) domain ACU11_05840 PF03776 Septum formation topological specificity factor MinE ACU11_05845 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ACU11_05850 PF05209 Septum formation inhibitor MinC, N-terminal domain ACU11_05850 PF03775 Septum formation inhibitor MinC, C-terminal domain ACU11_05860 PF07730 Histidine kinase ACU11_05865 PF00072 Response regulator receiver domain ACU11_05865 PF00196 Bacterial regulatory proteins, luxR family ACU11_05880 PF00730 HhH-GPD superfamily base excision DNA repair protein ACU11_05905 PF02222 ATP-grasp domain ACU11_05910 PF01527 Transposase ACU11_05945 PF00691 OmpA family ACU11_05945 PF04972 BON domain ACU11_05960 PF04717 Type VI secretion system, phage-baseplate injector ACU11_06025 PF04717 Type VI secretion system, phage-baseplate injector ACU11_06065 PF05598 Transposase domain (DUF772) ACU11_06070 PF05598 Transposase domain (DUF772) ACU11_06070 PF01609 Transposase DDE domain ACU11_06075 PF00182 Chitinase class I ACU11_06080 PF16671 Actin cross-linking domain ACU11_06080 PF04717 Type VI secretion system, phage-baseplate injector ACU11_06105 PF16671 Actin cross-linking domain ACU11_06105 PF04717 Type VI secretion system, phage-baseplate injector ACU11_06115 PF13276 HTH-like domain ACU11_06115 PF13683 Integrase core domain ACU11_06120 PF01527 Transposase ACU11_06135 PF16671 Actin cross-linking domain ACU11_06135 PF04717 Type VI secretion system, phage-baseplate injector ACU11_06190 PF00004 ATPase family associated with various cellular activities (AAA) ACU11_06190 PF10431 C-terminal, D2-small domain, of ClpB protein ACU11_06190 PF17871 AAA lid domain ACU11_06190 PF07724 AAA domain (Cdc48 subfamily) ACU11_06200 PF16671 Actin cross-linking domain ACU11_06200 PF04717 Type VI secretion system, phage-baseplate injector ACU11_06230 PF05598 Transposase domain (DUF772) ACU11_06315 PF01208 Uroporphyrinogen decarboxylase (URO-D) ACU11_06325 PF01761 3-dehydroquinate synthase ACU11_06330 PF01202 Shikimate kinase ACU11_06335 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ACU11_06335 PF01243 Pyridoxamine 5'-phosphate oxidase ACU11_06345 PF04012 PspA/IM30 family ACU11_06370 PF03738 Glutathionylspermidine synthase preATP-grasp ACU11_06400 PF00376 MerR family regulatory protein ACU11_06400 PF09278 MerR, DNA binding ACU11_06435 PF12706 Beta-lactamase superfamily domain ACU11_06455 PF00324 Amino acid permease ACU11_06460 PF00196 Bacterial regulatory proteins, luxR family ACU11_06465 PF00561 alpha/beta hydrolase fold ACU11_06470 PF00324 Amino acid permease ACU11_06475 PF01654 Cytochrome bd terminal oxidase subunit I ACU11_06480 PF02322 Cytochrome bd terminal oxidase subunit II ACU11_06485 PF00756 Putative esterase ACU11_06490 PF01769 Divalent cation transporter ACU11_06490 PF03448 MgtE intracellular N domain ACU11_06490 PF00571 CBS domain ACU11_06495 PF05524 PEP-utilising enzyme, N-terminal ACU11_06495 PF00391 PEP-utilising enzyme, mobile domain ACU11_06495 PF02896 PEP-utilising enzyme, TIM barrel domain ACU11_06500 PF00381 PTS HPr component phosphorylation site ACU11_06510 PF03668 P-loop ATPase protein family ACU11_06515 PF07475 HPr Serine kinase C-terminal domain ACU11_06515 PF02603 HPr Serine kinase N terminus ACU11_06520 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ACU11_06525 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ACU11_06530 PF04963 Sigma-54 factor, core binding domain ACU11_06530 PF04552 Sigma-54, DNA binding domain ACU11_06530 PF00309 Sigma-54 factor, Activator interacting domain (AID) ACU11_06535 PF00005 ABC transporter ACU11_06540 PF03968 OstA-like protein ACU11_06555 PF01380 SIS domain ACU11_06555 PF00571 CBS domain ACU11_06560 PF01722 BolA-like protein ACU11_06565 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ACU11_06585 PF00551 Formyl transferase ACU11_06600 PF00586 AIR synthase related protein, N-terminal domain ACU11_06600 PF02769 AIR synthase related protein, C-terminal domain ACU11_06610 PF01594 AI-2E family transporter ACU11_06615 PF00308 Bacterial dnaA protein ACU11_06620 PF00483 Nucleotidyl transferase ACU11_06625 PF01636 Phosphotransferase enzyme family ACU11_06650 PF07687 Peptidase dimerisation domain ACU11_06650 PF01546 Peptidase family M20/M25/M40 ACU11_06670 PF01609 Transposase DDE domain ACU11_06670 PF05598 Transposase domain (DUF772) ACU11_06675 PF00355 Rieske [2Fe-2S] domain ACU11_06685 PF00266 Aminotransferase class-V ACU11_06690 PF01458 Uncharacterized protein family (UPF0051) ACU11_06695 PF00005 ABC transporter ACU11_06700 PF01458 Uncharacterized protein family (UPF0051) ACU11_06705 PF02082 Transcriptional regulator ACU11_06750 PF03807 NADP oxidoreductase coenzyme F420-dependent ACU11_06750 PF14748 Pyrroline-5-carboxylate reductase dimerisation ACU11_06755 PF01168 Alanine racemase, N-terminal domain ACU11_06760 PF00437 Type II/IV secretion system protein ACU11_06765 PF00437 Type II/IV secretion system protein ACU11_06780 PF00117 Glutamine amidotransferase class-I ACU11_06780 PF00958 GMP synthase C terminal domain ACU11_06780 PF13302 Acetyltransferase (GNAT) domain ACU11_06780 PF13673 Acetyltransferase (GNAT) domain ACU11_06780 PF03352 Methyladenine glycosylase ACU11_06795 PF02622 Uncharacterized ACR, COG1678 ACU11_06800 PF03652 Holliday junction resolvase ACU11_06805 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ACU11_06805 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ACU11_06810 PF02566 OsmC-like protein ACU11_06820 PF02567 Phenazine biosynthesis-like protein ACU11_06830 PF01842 ACT domain ACU11_06830 PF00696 Amino acid kinase family ACU11_06845 PF08245 Mur ligase middle domain ACU11_06860 PF05598 Transposase domain (DUF772) ACU11_06870 PF00348 Polyprenyl synthetase ACU11_06875 PF00436 Single-strand binding protein family ACU11_06880 PF00563 EAL domain ACU11_06880 PF00360 Phytochrome region ACU11_06880 PF00990 Diguanylate cyclase, GGDEF domain ACU11_06880 PF01590 GAF domain ACU11_06885 PF14765 Polyketide synthase dehydratase ACU11_06885 PF00107 Zinc-binding dehydrogenase ACU11_06885 PF16197 Ketoacyl-synthetase C-terminal extension ACU11_06885 PF00109 Beta-ketoacyl synthase, N-terminal domain ACU11_06885 PF02801 Beta-ketoacyl synthase, C-terminal domain ACU11_06885 PF08659 KR domain ACU11_06885 PF08240 Alcohol dehydrogenase GroES-like domain ACU11_06885 PF00698 Acyl transferase domain ACU11_06885 PF00550 Phosphopantetheine attachment site ACU11_06895 PF10518 TAT (twin-arginine translocation) pathway signal sequence ACU11_06895 PF01799 [2Fe-2S] binding domain ACU11_06895 PF00111 2Fe-2S iron-sulfur cluster binding domain ACU11_06900 PF00941 FAD binding domain in molybdopterin dehydrogenase ACU11_06900 PF03450 CO dehydrogenase flavoprotein C-terminal domain ACU11_06905 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ACU11_06905 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ACU11_06935 PF04328 Selenoprotein, putative ACU11_06940 PF02554 Carbon starvation protein CstA ACU11_06940 PF13722 5TM C-terminal transporter carbon starvation CstA ACU11_06945 PF02678 Pirin ACU11_06945 PF05726 Pirin C-terminal cupin domain ACU11_06955 PF04717 Type VI secretion system, phage-baseplate injector ACU11_07020 PF02678 Pirin ACU11_07020 PF05726 Pirin C-terminal cupin domain ACU11_07030 PF04493 Endonuclease V ACU11_07035 PF00300 Histidine phosphatase superfamily (branch 1) ACU11_07040 PF13683 Integrase core domain ACU11_07040 PF13276 HTH-like domain ACU11_07045 PF01527 Transposase ACU11_07050 PF03377 TAL effector repeat ACU11_07055 PF04717 Type VI secretion system, phage-baseplate injector ACU11_07055 PF16671 Actin cross-linking domain ACU11_07065 PF13276 HTH-like domain ACU11_07065 PF13333 Integrase core domain ACU11_07065 PF00665 Integrase core domain ACU11_07070 PF03377 TAL effector repeat ACU11_07075 PF03377 TAL effector repeat ACU11_07080 PF03377 TAL effector repeat ACU11_07085 PF03377 TAL effector repeat ACU11_07090 PF03377 TAL effector repeat ACU11_07095 PF03377 TAL effector repeat ACU11_07100 PF03377 TAL effector repeat ACU11_07105 PF03377 TAL effector repeat ACU11_07120 PF13333 Integrase core domain ACU11_07120 PF13276 HTH-like domain ACU11_07120 PF00665 Integrase core domain ACU11_07125 PF03377 TAL effector repeat ACU11_07140 PF00072 Response regulator receiver domain ACU11_07140 PF01339 CheB methylesterase ACU11_07145 PF03705 CheR methyltransferase, all-alpha domain ACU11_07145 PF01739 CheR methyltransferase, SAM binding domain ACU11_07150 PF00990 Diguanylate cyclase, GGDEF domain ACU11_07150 PF13426 PAS domain ACU11_07150 PF00563 EAL domain ACU11_07155 PF01584 CheW-like domain ACU11_07160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACU11_07160 PF02203 Tar ligand binding domain homologue ACU11_07160 PF00672 HAMP domain ACU11_07165 PF02895 Signal transducing histidine kinase, homodimeric domain ACU11_07165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU11_07165 PF09078 CheY binding ACU11_07165 PF01584 CheW-like domain ACU11_07165 PF01627 Hpt domain ACU11_07175 PF03461 TRCF domain ACU11_07175 PF02559 CarD-like/TRCF domain ACU11_07175 PF00271 Helicase conserved C-terminal domain ACU11_07175 PF17757 UvrB interaction domain ACU11_07175 PF00270 DEAD/DEAH box helicase ACU11_07185 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ ACU11_07190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU11_07190 PF00672 HAMP domain ACU11_07190 PF00512 His Kinase A (phospho-acceptor) domain ACU11_07210 PF00795 Carbon-nitrogen hydrolase ACU11_07220 PF00749 tRNA synthetases class I (E and Q), catalytic domain ACU11_07225 PF01475 Ferric uptake regulator family ACU11_07260 PF00593 TonB dependent receptor ACU11_07260 PF07715 TonB-dependent Receptor Plug Domain ACU11_07275 PF00107 Zinc-binding dehydrogenase ACU11_07275 PF08240 Alcohol dehydrogenase GroES-like domain ACU11_07280 PF00654 Voltage gated chloride channel ACU11_07290 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ACU11_07290 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ACU11_07335 PF00271 Helicase conserved C-terminal domain ACU11_07335 PF00270 DEAD/DEAH box helicase ACU11_07335 PF03880 DbpA RNA binding domain ACU11_07340 PF08448 PAS fold ACU11_07340 PF00990 Diguanylate cyclase, GGDEF domain ACU11_07340 PF00563 EAL domain ACU11_07345 PF01479 S4 domain ACU11_07345 PF00849 RNA pseudouridylate synthase ACU11_07360 PF03737 Aldolase/RraA ACU11_07365 PF00144 Beta-lactamase ACU11_07370 PF00999 Sodium/hydrogen exchanger family ACU11_07375 PF00672 HAMP domain ACU11_07375 PF00512 His Kinase A (phospho-acceptor) domain ACU11_07375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU11_07380 PF00072 Response regulator receiver domain ACU11_07380 PF00486 Transcriptional regulatory protein, C terminal ACU11_07385 PF02321 Outer membrane efflux protein ACU11_07400 PF00873 AcrB/AcrD/AcrF family ACU11_07410 PF00005 ABC transporter ACU11_07410 PF00664 ABC transporter transmembrane region ACU11_07430 PF00665 Integrase core domain ACU11_07430 PF13936 Helix-turn-helix domain ACU11_07470 PF00085 Thioredoxin ACU11_07480 PF13603 Leucyl-tRNA synthetase, Domain 2 ACU11_07480 PF08264 Anticodon-binding domain of tRNA ACU11_07480 PF00133 tRNA synthetases class I (I, L, M and V) ACU11_07495 PF01467 Cytidylyltransferase-like ACU11_07515 PF02590 Predicted SPOUT methyltransferase ACU11_07530 PF04402 Protein of unknown function (DUF541) ACU11_07535 PF02545 Maf-like protein ACU11_07540 PF10150 Ribonuclease E/G family ACU11_07540 PF00575 S1 RNA binding domain ACU11_07545 PF13502 AsmA-like C-terminal region ACU11_07545 PF13116 Protein of unknown function ACU11_07555 PF01523 Putative modulator of DNA gyrase ACU11_07560 PF04751 Protein of unknown function (DUF615) ACU11_07565 PF01523 Putative modulator of DNA gyrase ACU11_07585 PF14521 Lysine-specific metallo-endopeptidase ACU11_07590 PF00348 Polyprenyl synthetase ACU11_07595 PF02609 Exonuclease VII small subunit ACU11_07600 PF11734 TilS substrate C-terminal domain ACU11_07600 PF01171 PP-loop family ACU11_07600 PF09179 TilS substrate binding domain ACU11_07605 PF00245 Alkaline phosphatase ACU11_07610 PF00375 Sodium:dicarboxylate symporter family ACU11_07625 PF00877 NlpC/P60 family ACU11_07630 PF00877 NlpC/P60 family ACU11_07635 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ACU11_07640 PF04235 Protein of unknown function (DUF418) ACU11_07645 PF01266 FAD dependent oxidoreductase ACU11_07650 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACU11_07650 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ACU11_07655 PF03377 TAL effector repeat ACU11_07665 PF01527 Transposase ACU11_07670 PF13276 HTH-like domain ACU11_07670 PF13683 Integrase core domain ACU11_07675 PF03377 TAL effector repeat ACU11_07680 PF13276 HTH-like domain ACU11_07680 PF00665 Integrase core domain ACU11_07680 PF13333 Integrase core domain ACU11_07690 PF04717 Type VI secretion system, phage-baseplate injector ACU11_07690 PF16671 Actin cross-linking domain ACU11_07695 PF03377 TAL effector repeat ACU11_07710 PF05598 Transposase domain (DUF772) ACU11_07735 PF05649 Peptidase family M13 ACU11_07735 PF01431 Peptidase family M13 ACU11_07740 PF05598 Transposase domain (DUF772) ACU11_07750 PF00082 Subtilase family ACU11_07755 PF01668 SmpB protein ACU11_07760 PF03364 Polyketide cyclase / dehydrase and lipid transport ACU11_07765 PF03658 RnfH family Ubiquitin ACU11_07770 PF04355 SmpA / OmlA family ACU11_07775 PF01475 Ferric uptake regulator family ACU11_07780 PF02463 RecF/RecN/SMC N terminal domain ACU11_07785 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding ACU11_07785 PF01628 HrcA protein C terminal domain ACU11_07790 PF01025 GrpE ACU11_07795 PF00012 Hsp70 protein ACU11_07800 PF01556 DnaJ C terminal domain ACU11_07800 PF00684 DnaJ central domain ACU11_07800 PF00226 DnaJ domain ACU11_07805 PF08543 Phosphomethylpyrimidine kinase ACU11_07820 PF03466 LysR substrate binding domain ACU11_07820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACU11_07825 PF00664 ABC transporter transmembrane region ACU11_07825 PF00005 ABC transporter ACU11_07830 PF01205 Uncharacterized protein family UPF0029 ACU11_07835 PF03641 Possible lysine decarboxylase ACU11_07840 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ACU11_07840 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACU11_07845 PF02817 e3 binding domain ACU11_07845 PF00364 Biotin-requiring enzyme ACU11_07845 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ACU11_07850 PF02779 Transketolase, pyrimidine binding domain ACU11_07850 PF16870 2-oxoglutarate dehydrogenase C-terminal ACU11_07850 PF00676 Dehydrogenase E1 component ACU11_07850 PF16078 2-oxoglutarate dehydrogenase N-terminus ACU11_07860 PF08007 Cupin superfamily protein ACU11_07875 PF08328 Adenylosuccinate lyase C-terminal ACU11_07875 PF00206 Lyase ACU11_07890 PF00206 Lyase ACU11_07890 PF10415 Fumarase C C-terminus ACU11_07920 PF00005 ABC transporter ACU11_07925 PF00392 Bacterial regulatory proteins, gntR family ACU11_07935 PF00255 Glutathione peroxidase ACU11_07940 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ACU11_07940 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ACU11_07945 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ACU11_07945 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ACU11_07945 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ACU11_07950 PF04102 SlyX ACU11_07970 PF07690 Major Facilitator Superfamily ACU11_07975 PF00294 pfkB family carbohydrate kinase ACU11_07995 PF01209 ubiE/COQ5 methyltransferase family ACU11_08000 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACU11_08000 PF02770 Acyl-CoA dehydrogenase, middle domain ACU11_08000 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACU11_08020 PF00773 RNB domain ACU11_08020 PF08206 Ribonuclease B OB domain ACU11_08020 PF00575 S1 RNA binding domain ACU11_08020 PF08461 Ribonuclease R winged-helix domain ACU11_08020 PF17876 Cold shock domain ACU11_08030 PF08032 RNA 2'-O ribose methyltransferase substrate binding ACU11_08030 PF00588 SpoU rRNA Methylase family ACU11_08050 PF00929 Exonuclease ACU11_08060 PF01895 PhoU domain ACU11_08065 PF00005 ABC transporter ACU11_08070 PF00528 Binding-protein-dependent transport system inner membrane component ACU11_08075 PF00528 Binding-protein-dependent transport system inner membrane component ACU11_08080 PF12849 PBP superfamily domain ACU11_08085 PF12849 PBP superfamily domain ACU11_08100 PF00484 Carbonic anhydrase ACU11_08105 PF01740 STAS domain ACU11_08105 PF00916 Sulfate permease family ACU11_08110 PF00730 HhH-GPD superfamily base excision DNA repair protein ACU11_08110 PF00633 Helix-hairpin-helix motif ACU11_08110 PF10576 Iron-sulfur binding domain of endonuclease III ACU11_08120 PF00378 Enoyl-CoA hydratase/isomerase ACU11_08125 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ACU11_08125 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ACU11_08130 PF00293 NUDIX domain ACU11_08135 PF00581 Rhodanese-like domain ACU11_08175 PF10672 S-adenosylmethionine-dependent methyltransferase ACU11_08175 PF01170 Putative RNA methylase family UPF0020 ACU11_08175 PF02926 THUMP domain ACU11_08180 PF01513 ATP-NAD kinase ACU11_08195 PF00248 Aldo/keto reductase family ACU11_08205 PF08411 Exonuclease C-terminal ACU11_08205 PF00929 Exonuclease ACU11_08210 PF01494 FAD binding domain ACU11_08215 PF00266 Aminotransferase class-V ACU11_08225 PF06052 3-hydroxyanthranilic acid dioxygenase ACU11_08230 PF00484 Carbonic anhydrase ACU11_08255 PF01336 OB-fold nucleic acid binding domain ACU11_08255 PF00152 tRNA synthetases class II (D, K and N) ACU11_08260 PF01521 Iron-sulphur cluster biosynthesis ACU11_08265 PF01250 Ribosomal protein S6 ACU11_08270 PF01084 Ribosomal protein S18 ACU11_08275 PF01281 Ribosomal protein L9, N-terminal domain ACU11_08275 PF03948 Ribosomal protein L9, C-terminal domain ACU11_08280 PF02463 RecF/RecN/SMC N terminal domain ACU11_08285 PF04354 ZipA, C-terminal FtsZ-binding domain ACU11_08295 PF01653 NAD-dependent DNA ligase adenylation domain ACU11_08295 PF03120 NAD-dependent DNA ligase OB-fold domain ACU11_08295 PF00533 BRCA1 C Terminus (BRCT) domain ACU11_08295 PF12826 Helix-hairpin-helix motif ACU11_08295 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ACU11_08300 PF00152 tRNA synthetases class II (D, K and N) ACU11_08310 PF01008 Initiation factor 2 subunit family ACU11_08315 PF00521 DNA gyrase/topoisomerase IV, subunit A ACU11_08315 PF03989 DNA gyrase C-terminal domain, beta-propeller ACU11_08320 PF05598 Transposase domain (DUF772) ACU11_08335 PF01527 Transposase ACU11_08340 PF02824 TGS domain ACU11_08340 PF03129 Anticodon binding domain ACU11_08340 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ACU11_08340 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ACU11_08345 PF05198 Translation initiation factor IF-3, N-terminal domain ACU11_08345 PF00707 Translation initiation factor IF-3, C-terminal domain ACU11_08350 PF01632 Ribosomal protein L35 ACU11_08355 PF00453 Ribosomal protein L20 ACU11_08360 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ACU11_08360 PF01409 tRNA synthetases class II core domain (F) ACU11_08365 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ACU11_08365 PF01588 Putative tRNA binding domain ACU11_08365 PF03484 tRNA synthetase B5 domain ACU11_08365 PF03483 B3/4 domain ACU11_08365 PF03147 Ferredoxin-fold anticodon binding domain ACU11_08370 PF00216 Bacterial DNA-binding protein ACU11_08375 PF13411 MerR HTH family regulatory protein ACU11_08395 PF02397 Bacterial sugar transferase ACU11_08415 PF13439 Glycosyltransferase Family 4 ACU11_08415 PF00534 Glycosyl transferases group 1 ACU11_08425 PF14667 Polysaccharide biosynthesis C-terminal domain ACU11_08440 PF03808 Glycosyl transferase WecB/TagA/CpsF family ACU11_08460 PF02779 Transketolase, pyrimidine binding domain ACU11_08460 PF02780 Transketolase, C-terminal domain ACU11_08460 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ACU11_08470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACU11_08470 PF02770 Acyl-CoA dehydrogenase, middle domain ACU11_08470 PF12806 Acetyl-CoA dehydrogenase C-terminal like ACU11_08470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACU11_08480 PF08212 Lipocalin-like domain ACU11_08510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU11_08510 PF13426 PAS domain ACU11_08510 PF00072 Response regulator receiver domain ACU11_08515 PF04362 Bacterial Fe(2+) trafficking ACU11_08520 PF10576 Iron-sulfur binding domain of endonuclease III ACU11_08520 PF14815 NUDIX domain ACU11_08520 PF00633 Helix-hairpin-helix motif ACU11_08520 PF00730 HhH-GPD superfamily base excision DNA repair protein ACU11_08530 PF02881 SRP54-type protein, helical bundle domain ACU11_08530 PF00448 SRP54-type protein, GTPase domain ACU11_08540 PF05544 Proline racemase ACU11_08545 PF01266 FAD dependent oxidoreductase ACU11_08555 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACU11_08555 PF04324 BFD-like [2Fe-2S] binding domain ACU11_08560 PF00701 Dihydrodipicolinate synthetase family ACU11_08565 PF00171 Aldehyde dehydrogenase family ACU11_08570 PF01321 Creatinase/Prolidase N-terminal domain ACU11_08570 PF00557 Metallopeptidase family M24 ACU11_08585 PF13520 Amino acid permease ACU11_08625 PF00082 Subtilase family ACU11_08625 PF09286 Pro-kumamolisin, activation domain ACU11_08635 PF07715 TonB-dependent Receptor Plug Domain ACU11_08635 PF00593 TonB dependent receptor ACU11_08640 PF07532 Bacterial Ig-like domain (group 4) ACU11_08645 PF04616 Glycosyl hydrolases family 43 ACU11_08650 PF00326 Prolyl oligopeptidase family ACU11_08650 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region ACU11_08680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU11_08680 PF00183 Hsp90 protein ACU11_08690 PF01467 Cytidylyltransferase-like ACU11_08705 PF00037 4Fe-4S binding domain ACU11_08755 PF02547 Queuosine biosynthesis protein ACU11_08760 PF01702 Queuine tRNA-ribosyltransferase ACU11_08765 PF02699 Preprotein translocase subunit ACU11_08770 PF07549 SecD/SecF GG Motif ACU11_08770 PF13721 SecD export protein N-terminal TM region ACU11_08770 PF02355 Protein export membrane protein ACU11_08775 PF02355 Protein export membrane protein ACU11_08775 PF07549 SecD/SecF GG Motif ACU11_08790 PF01527 Transposase ACU11_08795 PF13276 HTH-like domain ACU11_08795 PF13683 Integrase core domain ACU11_08815 PF01593 Flavin containing amine oxidoreductase ACU11_08820 PF01609 Transposase DDE domain ACU11_08820 PF05598 Transposase domain (DUF772) ACU11_08830 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ACU11_08835 PF00294 pfkB family carbohydrate kinase ACU11_08840 PF00391 PEP-utilising enzyme, mobile domain ACU11_08840 PF00381 PTS HPr component phosphorylation site ACU11_08840 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ACU11_08840 PF05524 PEP-utilising enzyme, N-terminal ACU11_08840 PF02896 PEP-utilising enzyme, TIM barrel domain ACU11_08845 PF00356 Bacterial regulatory proteins, lacI family ACU11_08850 PF13006 Insertion element 4 transposase N-terminal ACU11_08850 PF01609 Transposase DDE domain ACU11_08855 PF00873 AcrB/AcrD/AcrF family ACU11_08860 PF00529 HlyD membrane-fusion protein of T1SS ACU11_08860 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ACU11_08870 PF05088 Bacterial NAD-glutamate dehydrogenase ACU11_08880 PF07690 Major Facilitator Superfamily ACU11_08885 PF00072 Response regulator receiver domain ACU11_08890 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ACU11_08890 PF00072 Response regulator receiver domain ACU11_08890 PF01627 Hpt domain ACU11_08890 PF00512 His Kinase A (phospho-acceptor) domain ACU11_08890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU11_08890 PF00672 HAMP domain ACU11_08895 PF04286 Protein of unknown function (DUF445) ACU11_08905 PF00005 ABC transporter ACU11_08910 PF00202 Aminotransferase class-III ACU11_08920 PF02634 FdhD/NarQ family ACU11_08925 PF00384 Molybdopterin oxidoreductase ACU11_08930 PF07690 Major Facilitator Superfamily ACU11_08930 PF00083 Sugar (and other) transporter ACU11_08935 PF00072 Response regulator receiver domain ACU11_08935 PF00990 Diguanylate cyclase, GGDEF domain ACU11_08940 PF01266 FAD dependent oxidoreductase ACU11_08945 PF00120 Glutamine synthetase, catalytic domain ACU11_08950 PF07722 Peptidase C26 ACU11_08955 PF00120 Glutamine synthetase, catalytic domain ACU11_08990 PF04717 Type VI secretion system, phage-baseplate injector ACU11_08990 PF16671 Actin cross-linking domain ACU11_09000 PF13276 HTH-like domain ACU11_09000 PF13683 Integrase core domain ACU11_09005 PF03377 TAL effector repeat ACU11_09010 PF03377 TAL effector repeat ACU11_09025 PF00202 Aminotransferase class-III ACU11_09030 PF13416 Bacterial extracellular solute-binding protein ACU11_09035 PF13533 Biotin-lipoyl like ACU11_09040 PF07690 Major Facilitator Superfamily ACU11_09045 PF02321 Outer membrane efflux protein ACU11_09050 PF00005 ABC transporter ACU11_09050 PF08402 TOBE domain ACU11_09055 PF00528 Binding-protein-dependent transport system inner membrane component ACU11_09060 PF00528 Binding-protein-dependent transport system inner membrane component ACU11_09065 PF00171 Aldehyde dehydrogenase family ACU11_09080 PF00571 CBS domain ACU11_09080 PF03471 Transporter associated domain ACU11_09090 PF02130 Uncharacterized protein family UPF0054 ACU11_09100 PF02562 PhoH-like protein ACU11_09105 PF01938 TRAM domain ACU11_09105 PF00919 Uncharacterized protein family UPF0004 ACU11_09105 PF04055 Radical SAM superfamily ACU11_09120 PF01464 Transglycosylase SLT domain ACU11_09125 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal ACU11_09125 PF00355 Rieske [2Fe-2S] domain ACU11_09130 PF00033 Cytochrome b/b6/petB ACU11_09130 PF00032 Cytochrome b(C-terminal)/b6/petD ACU11_09135 PF02167 Cytochrome C1 family ACU11_09140 PF00043 Glutathione S-transferase, C-terminal domain ACU11_09140 PF02798 Glutathione S-transferase, N-terminal domain ACU11_09145 PF04386 Stringent starvation protein B ACU11_09170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACU11_09170 PF00672 HAMP domain ACU11_09170 PF02743 Cache domain ACU11_09175 PF01584 CheW-like domain ACU11_09230 PF03328 HpcH/HpaI aldolase/citrate lyase family ACU11_09285 PF00291 Pyridoxal-phosphate dependent enzyme ACU11_09335 PF01612 3'-5' exonuclease ACU11_09335 PF00570 HRDC domain ACU11_09340 PF03781 Sulfatase-modifying factor enzyme 1 ACU11_09350 PF02601 Exonuclease VII, large subunit ACU11_09350 PF13742 OB-fold nucleic acid binding domain ACU11_09355 PF08331 Domain of unknown function (DUF1730) ACU11_09360 PF03853 YjeF-related protein N-terminus ACU11_09360 PF01256 Carbohydrate kinase ACU11_09365 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ACU11_09370 PF01520 N-acetylmuramoyl-L-alanine amidase ACU11_09370 PF11741 AMIN domain ACU11_09375 PF01119 DNA mismatch repair protein, C-terminal domain ACU11_09375 PF08676 MutL C terminal dimerisation domain ACU11_09390 PF07879 PHB/PHA accumulation regulator DNA-binding domain ACU11_09390 PF05233 PHB accumulation regulatory domain ACU11_09395 PF00106 short chain dehydrogenase ACU11_09400 PF00749 tRNA synthetases class I (E and Q), catalytic domain ACU11_09405 PF01435 Peptidase family M48 ACU11_09410 PF00072 Response regulator receiver domain ACU11_09410 PF00990 Diguanylate cyclase, GGDEF domain ACU11_09410 PF00563 EAL domain ACU11_09420 PF07152 YaeQ protein ACU11_09425 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 ACU11_09430 PF00313 'Cold-shock' DNA-binding domain ACU11_09435 PF02798 Glutathione S-transferase, N-terminal domain ACU11_09435 PF14497 Glutathione S-transferase, C-terminal domain ACU11_09445 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ACU11_09450 PF00156 Phosphoribosyl transferase domain ACU11_09455 PF00271 Helicase conserved C-terminal domain ACU11_09455 PF03880 DbpA RNA binding domain ACU11_09455 PF00270 DEAD/DEAH box helicase ACU11_09475 PF00545 ribonuclease ACU11_09480 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ACU11_09480 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ACU11_09485 PF00459 Inositol monophosphatase family ACU11_09490 PF00588 SpoU rRNA Methylase family ACU11_09500 PF00990 Diguanylate cyclase, GGDEF domain ACU11_09500 PF00563 EAL domain ACU11_09500 PF13188 PAS domain ACU11_09500 PF03707 Bacterial signalling protein N terminal repeat ACU11_09505 PF04055 Radical SAM superfamily ACU11_09510 PF09285 Elongation factor P, C-terminal ACU11_09510 PF08207 Elongation factor P (EF-P) KOW-like domain ACU11_09510 PF01132 Elongation factor P (EF-P) OB domain ACU11_09520 PF01979 Amidohydrolase family ACU11_09530 PF13419 Haloacid dehalogenase-like hydrolase ACU11_09540 PF00295 Glycosyl hydrolases family 28 ACU11_09545 PF13276 HTH-like domain ACU11_09545 PF00665 Integrase core domain ACU11_09545 PF13333 Integrase core domain ACU11_09550 PF01527 Transposase ACU11_09565 PF17954 Quercetinase C-terminal cupin domain ACU11_09565 PF02678 Pirin ACU11_09570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACU11_09570 PF03466 LysR substrate binding domain ACU11_09595 PF08543 Phosphomethylpyrimidine kinase ACU11_09595 PF02581 Thiamine monophosphate synthase ACU11_09605 PF02562 PhoH-like protein ACU11_09605 PF13638 PIN domain ACU11_09610 PF00578 AhpC/TSA family ACU11_09625 PF00701 Dihydrodipicolinate synthetase family ACU11_09635 PF11953 Domain of unknown function (DUF3470) ACU11_09635 PF00037 4Fe-4S binding domain ACU11_09640 PF05035 2-keto-3-deoxy-galactonokinase ACU11_09645 PF08450 SMP-30/Gluconolactonase/LRE-like region ACU11_09650 PF13378 Enolase C-terminal domain-like ACU11_09650 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ACU11_09655 PF01081 KDPG and KHG aldolase ACU11_09660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACU11_09660 PF03466 LysR substrate binding domain ACU11_09680 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ACU11_09680 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ACU11_09690 PF00083 Sugar (and other) transporter ACU11_09695 PF01520 N-acetylmuramoyl-L-alanine amidase ACU11_09700 PF02649 Type I GTP cyclohydrolase folE2 ACU11_09710 PF01743 Poly A polymerase head domain ACU11_09710 PF12626 Polymerase A arginine-rich C-terminus ACU11_09710 PF12627 Probable RNA and SrmB- binding site of polymerase A ACU11_09715 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ACU11_09720 PF02548 Ketopantoate hydroxymethyltransferase ACU11_09725 PF02569 Pantoate-beta-alanine ligase ACU11_09730 PF02261 Aspartate decarboxylase ACU11_09735 PF00342 Phosphoglucose isomerase ACU11_09755 PF00933 Glycosyl hydrolase family 3 N terminal domain ACU11_09755 PF01915 Glycosyl hydrolase family 3 C-terminal domain ACU11_09755 PF14310 Fibronectin type III-like domain ACU11_09760 PF00474 Sodium:solute symporter family ACU11_09765 PF00990 Diguanylate cyclase, GGDEF domain ACU11_09765 PF00360 Phytochrome region ACU11_09765 PF00563 EAL domain ACU11_09765 PF01590 GAF domain ACU11_09770 PF02013 Cellulose or protein binding domain ACU11_09770 PF00150 Cellulase (glycosyl hydrolase family 5) ACU11_09775 PF00072 Response regulator receiver domain ACU11_09785 PF04551 GcpE protein ACU11_09790 PF01569 PAP2 superfamily ACU11_09795 PF07690 Major Facilitator Superfamily ACU11_09800 PF01177 Asp/Glu/Hydantoin racemase ACU11_09805 PF00892 EamA-like transporter family ACU11_09810 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ACU11_09810 PF01565 FAD binding domain ACU11_09815 PF01180 Dihydroorotate dehydrogenase ACU11_09830 PF00171 Aldehyde dehydrogenase family ACU11_09840 PF03073 TspO/MBR family ACU11_09845 PF01842 ACT domain ACU11_09845 PF00696 Amino acid kinase family ACU11_09845 PF03447 Homoserine dehydrogenase, NAD binding domain ACU11_09845 PF13840 ACT domain ACU11_09845 PF00742 Homoserine dehydrogenase ACU11_09850 PF00288 GHMP kinases N terminal domain ACU11_09850 PF08544 GHMP kinases C terminal ACU11_09855 PF01527 Transposase ACU11_09895 PF14821 Threonine synthase N terminus ACU11_09895 PF00291 Pyridoxal-phosphate dependent enzyme ACU11_09910 PF03129 Anticodon binding domain ACU11_09910 PF13393 Histidyl-tRNA synthetase ACU11_09920 PF01634 ATP phosphoribosyltransferase ACU11_09920 PF08029 HisG, C-terminal domain ACU11_09925 PF00815 Histidinol dehydrogenase ACU11_09930 PF00155 Aminotransferase class I and II ACU11_09935 PF00475 Imidazoleglycerol-phosphate dehydratase ACU11_09940 PF00117 Glutamine amidotransferase class-I ACU11_09945 PF00977 Histidine biosynthesis protein ACU11_09950 PF00977 Histidine biosynthesis protein ACU11_09955 PF01502 Phosphoribosyl-AMP cyclohydrolase ACU11_09955 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ACU11_09980 PF03079 ARD/ARD' family ACU11_09985 PF00596 Class II Aldolase and Adducin N-terminal domain ACU11_09990 PF13520 Amino acid permease ACU11_09995 PF13520 Amino acid permease ACU11_10005 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ACU11_10005 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ACU11_10010 PF01565 FAD binding domain ACU11_10010 PF02913 FAD linked oxidases, C-terminal domain ACU11_10030 PF01132 Elongation factor P (EF-P) OB domain ACU11_10030 PF08207 Elongation factor P (EF-P) KOW-like domain ACU11_10030 PF09285 Elongation factor P, C-terminal ACU11_10035 PF00106 short chain dehydrogenase ACU11_10040 PF00682 HMGL-like ACU11_10050 PF00378 Enoyl-CoA hydratase/isomerase ACU11_10060 PF07670 Nucleoside recognition ACU11_10060 PF02421 Ferrous iron transport protein B ACU11_10060 PF07664 Ferrous iron transport protein B C terminus ACU11_10080 PF00155 Aminotransferase class I and II ACU11_10085 PF03473 MOSC domain ACU11_10085 PF03475 3-alpha domain ACU11_10090 PF05173 Dihydrodipicolinate reductase, C-terminus ACU11_10090 PF01113 Dihydrodipicolinate reductase, N-terminus ACU11_10095 PF00117 Glutamine amidotransferase class-I ACU11_10095 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ACU11_10105 PF02142 MGS-like domain ACU11_10105 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ACU11_10105 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ACU11_10110 PF03449 Transcription elongation factor, N-terminal ACU11_10110 PF01272 Transcription elongation factor, GreA/GreB, C-term ACU11_10120 PF01368 DHH family ACU11_10120 PF17768 RecJ OB domain ACU11_10120 PF02272 DHHA1 domain ACU11_10140 PF03462 PCRF domain ACU11_10140 PF00472 RF-1 domain ACU11_10145 PF01336 OB-fold nucleic acid binding domain ACU11_10145 PF00152 tRNA synthetases class II (D, K and N) ACU11_10150 PF00072 Response regulator receiver domain ACU11_10155 PF00072 Response regulator receiver domain ACU11_10155 PF01627 Hpt domain ACU11_10155 PF00512 His Kinase A (phospho-acceptor) domain ACU11_10155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU11_10160 PF00378 Enoyl-CoA hydratase/isomerase ACU11_10165 PF13193 AMP-binding enzyme C-terminal domain ACU11_10165 PF00501 AMP-binding enzyme ACU11_10175 PF00330 Aconitase family (aconitate hydratase) ACU11_10175 PF00694 Aconitase C-terminal domain ACU11_10190 PF11791 Aconitate B N-terminal domain ACU11_10190 PF00330 Aconitase family (aconitate hydratase) ACU11_10190 PF06434 Aconitate hydratase 2 N-terminus ACU11_10195 PF00561 alpha/beta hydrolase fold ACU11_10200 PF03707 Bacterial signalling protein N terminal repeat ACU11_10200 PF00563 EAL domain ACU11_10200 PF00990 Diguanylate cyclase, GGDEF domain ACU11_10205 PF01339 CheB methylesterase ACU11_10205 PF00072 Response regulator receiver domain ACU11_10210 PF03975 CheD chemotactic sensory transduction ACU11_10215 PF01739 CheR methyltransferase, SAM binding domain ACU11_10215 PF03705 CheR methyltransferase, all-alpha domain ACU11_10220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACU11_10220 PF02203 Tar ligand binding domain homologue ACU11_10220 PF00672 HAMP domain ACU11_10230 PF01584 CheW-like domain ACU11_10235 PF07317 Flagellar regulator YcgR ACU11_10235 PF07238 PilZ domain ACU11_10240 PF02203 Tar ligand binding domain homologue ACU11_10240 PF00672 HAMP domain ACU11_10240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACU11_10245 PF00672 HAMP domain ACU11_10245 PF02203 Tar ligand binding domain homologue ACU11_10245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACU11_10250 PF00672 HAMP domain ACU11_10250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACU11_10250 PF02203 Tar ligand binding domain homologue ACU11_10255 PF00672 HAMP domain ACU11_10255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACU11_10255 PF02203 Tar ligand binding domain homologue ACU11_10260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACU11_10260 PF02203 Tar ligand binding domain homologue ACU11_10260 PF00672 HAMP domain ACU11_10265 PF02203 Tar ligand binding domain homologue ACU11_10265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACU11_10265 PF00672 HAMP domain ACU11_10270 PF00672 HAMP domain ACU11_10270 PF02203 Tar ligand binding domain homologue ACU11_10270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACU11_10275 PF02203 Tar ligand binding domain homologue ACU11_10275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACU11_10275 PF00672 HAMP domain ACU11_10285 PF02203 Tar ligand binding domain homologue ACU11_10285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACU11_10285 PF00672 HAMP domain ACU11_10290 PF00672 HAMP domain ACU11_10290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACU11_10290 PF02203 Tar ligand binding domain homologue ACU11_10300 PF02203 Tar ligand binding domain homologue ACU11_10300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACU11_10300 PF00672 HAMP domain ACU11_10305 PF09078 CheY binding ACU11_10305 PF02895 Signal transducing histidine kinase, homodimeric domain ACU11_10305 PF01584 CheW-like domain ACU11_10305 PF01627 Hpt domain ACU11_10305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU11_10310 PF00072 Response regulator receiver domain ACU11_10320 PF01584 CheW-like domain ACU11_10325 PF13614 AAA domain ACU11_10330 PF00691 OmpA family ACU11_10330 PF13677 Membrane MotB of proton-channel complex MotA/MotB ACU11_10335 PF01618 MotA/TolQ/ExbB proton channel family ACU11_10355 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ACU11_10355 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ACU11_10365 PF00593 TonB dependent receptor ACU11_10365 PF07715 TonB-dependent Receptor Plug Domain ACU11_10405 PF18273 Type III R-M EcoP15I C-terminal domain ACU11_10405 PF01555 DNA methylase ACU11_10415 PF08774 VRR-NUC domain ACU11_10415 PF04851 Type III restriction enzyme, res subunit ACU11_10435 PF07194 P2 response regulator binding domain ACU11_10435 PF01584 CheW-like domain ACU11_10435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU11_10435 PF02895 Signal transducing histidine kinase, homodimeric domain ACU11_10435 PF01627 Hpt domain ACU11_10440 PF04344 Chemotaxis phosphatase, CheZ ACU11_10445 PF00072 Response regulator receiver domain ACU11_10450 PF04545 Sigma-70, region 4 ACU11_10450 PF04542 Sigma-70 region 2 ACU11_10450 PF04539 Sigma-70 region 3 ACU11_10455 PF10609 NUBPL iron-transfer P-loop NTPase ACU11_10460 PF00448 SRP54-type protein, GTPase domain ACU11_10465 PF00771 FHIPEP family ACU11_10470 PF01312 FlhB HrpN YscU SpaS Family ACU11_10475 PF00990 Diguanylate cyclase, GGDEF domain ACU11_10475 PF00563 EAL domain ACU11_10475 PF03707 Bacterial signalling protein N terminal repeat ACU11_10480 PF13188 PAS domain ACU11_10480 PF03707 Bacterial signalling protein N terminal repeat ACU11_10480 PF00990 Diguanylate cyclase, GGDEF domain ACU11_10480 PF00563 EAL domain ACU11_10485 PF01609 Transposase DDE domain ACU11_10485 PF05598 Transposase domain (DUF772) ACU11_10490 PF13188 PAS domain ACU11_10490 PF03707 Bacterial signalling protein N terminal repeat ACU11_10490 PF00990 Diguanylate cyclase, GGDEF domain ACU11_10490 PF00563 EAL domain ACU11_10495 PF01311 Bacterial export proteins, family 1 ACU11_10500 PF01313 Bacterial export proteins, family 3 ACU11_10505 PF00813 FliP family ACU11_10510 PF04347 Flagellar biosynthesis protein, FliO ACU11_10515 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ACU11_10520 PF02154 Flagellar motor switch protein FliM ACU11_10520 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ACU11_10540 PF18269 T3SS EscN ATPase C-terminal domain ACU11_10540 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ACU11_10550 PF01706 FliG C-terminal domain ACU11_10550 PF14841 FliG middle domain ACU11_10550 PF14842 FliG N-terminal domain ACU11_10555 PF08345 Flagellar M-ring protein C-terminal ACU11_10555 PF01514 Secretory protein of YscJ/FliF family ACU11_10560 PF02049 Flagellar hook-basal body complex protein FliE ACU11_10565 PF00534 Glycosyl transferases group 1 ACU11_10565 PF00535 Glycosyl transferase family 2 ACU11_10595 PF00106 short chain dehydrogenase ACU11_10600 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ACU11_10600 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ACU11_10610 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ACU11_10615 PF00072 Response regulator receiver domain ACU11_10615 PF00158 Sigma-54 interaction domain ACU11_10615 PF02954 Bacterial regulatory protein, Fis family ACU11_10620 PF01339 CheB methylesterase ACU11_10620 PF00072 Response regulator receiver domain ACU11_10625 PF04552 Sigma-54, DNA binding domain ACU11_10625 PF00309 Sigma-54 factor, Activator interacting domain (AID) ACU11_10625 PF04963 Sigma-54 factor, core binding domain ACU11_10630 PF00196 Bacterial regulatory proteins, luxR family ACU11_10630 PF00072 Response regulator receiver domain ACU11_10645 PF02561 Flagellar protein FliS ACU11_10650 PF07195 Flagellar hook-associated protein 2 C-terminus ACU11_10650 PF07196 Flagellin hook IN motif ACU11_10650 PF02465 Flagellar hook-associated protein 2 N-terminus ACU11_10655 PF00669 Bacterial flagellin N-terminal helical region ACU11_10655 PF00700 Bacterial flagellin C-terminal helical region ACU11_10665 PF07196 Flagellin hook IN motif ACU11_10665 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ACU11_10670 PF10135 Rod binding protein ACU11_10670 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ACU11_10675 PF02119 Flagellar P-ring protein ACU11_10680 PF02107 Flagellar L-ring protein ACU11_10685 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ACU11_10685 PF00460 Flagella basal body rod protein ACU11_10690 PF00460 Flagella basal body rod protein ACU11_10690 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ACU11_10695 PF00460 Flagella basal body rod protein ACU11_10695 PF07559 Flagellar basal body protein FlaE ACU11_10695 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ACU11_10700 PF03963 Flagellar hook capping protein - N-terminal region ACU11_10705 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ACU11_10705 PF00460 Flagella basal body rod protein ACU11_10715 PF01584 CheW-like domain ACU11_10715 PF00072 Response regulator receiver domain ACU11_10735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU11_10735 PF00512 His Kinase A (phospho-acceptor) domain ACU11_10740 PF00990 Diguanylate cyclase, GGDEF domain ACU11_10740 PF00563 EAL domain ACU11_10740 PF03707 Bacterial signalling protein N terminal repeat ACU11_10745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU11_10745 PF07730 Histidine kinase ACU11_10750 PF00990 Diguanylate cyclase, GGDEF domain ACU11_10750 PF03707 Bacterial signalling protein N terminal repeat ACU11_10750 PF00563 EAL domain ACU11_10760 PF05598 Transposase domain (DUF772) ACU11_10775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACU11_10775 PF00672 HAMP domain ACU11_10775 PF12729 Four helix bundle sensory module for signal transduction ACU11_10780 PF04356 Protein of unknown function (DUF489) ACU11_10790 PF00293 NUDIX domain ACU11_10795 PF02617 ATP-dependent Clp protease adaptor protein ClpS ACU11_10800 PF00004 ATPase family associated with various cellular activities (AAA) ACU11_10800 PF02861 Clp amino terminal domain, pathogenicity island component ACU11_10800 PF07724 AAA domain (Cdc48 subfamily) ACU11_10800 PF17871 AAA lid domain ACU11_10800 PF10431 C-terminal, D2-small domain, of ClpB protein ACU11_10805 PF01176 Translation initiation factor 1A / IF-1 ACU11_10810 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ACU11_10830 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACU11_10835 PF17854 FtsK alpha domain ACU11_10835 PF09397 Ftsk gamma domain ACU11_10835 PF01580 FtsK/SpoIIIE family ACU11_10835 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ACU11_10845 PF03548 Outer membrane lipoprotein carrier protein LolA ACU11_10855 PF12002 MgsA AAA+ ATPase C terminal ACU11_10855 PF00004 ATPase family associated with various cellular activities (AAA) ACU11_10855 PF16193 AAA C-terminal domain ACU11_10865 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ACU11_10875 PF00654 Voltage gated chloride channel ACU11_10880 PF00108 Thiolase, N-terminal domain ACU11_10880 PF02803 Thiolase, C-terminal domain ACU11_10885 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ACU11_10885 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ACU11_10885 PF00378 Enoyl-CoA hydratase/isomerase ACU11_10895 PF00334 Nucleoside diphosphate kinase ACU11_10900 PF04055 Radical SAM superfamily ACU11_10910 PF13464 Domain of unknown function (DUF4115) ACU11_10920 PF13360 PQQ-like domain ACU11_10920 PF01011 PQQ enzyme repeat ACU11_10925 PF01926 50S ribosome-binding GTPase ACU11_10925 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ACU11_10930 PF00994 Probable molybdopterin binding domain ACU11_10930 PF03454 MoeA C-terminal region (domain IV) ACU11_10930 PF03453 MoeA N-terminal region (domain I and II) ACU11_10940 PF00899 ThiF family ACU11_10965 PF01609 Transposase DDE domain ACU11_10965 PF05598 Transposase domain (DUF772) ACU11_10975 PF01609 Transposase DDE domain ACU11_10975 PF05598 Transposase domain (DUF772) ACU11_10985 PF05598 Transposase domain (DUF772) ACU11_10985 PF01609 Transposase DDE domain ACU11_11000 PF03453 MoeA N-terminal region (domain I and II) ACU11_11000 PF03454 MoeA C-terminal region (domain IV) ACU11_11000 PF00994 Probable molybdopterin binding domain ACU11_11005 PF12804 MobA-like NTP transferase domain ACU11_11030 PF10414 Sirohaem synthase dimerisation region ACU11_11030 PF14824 Sirohaem biosynthesis protein central ACU11_11030 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ACU11_11065 PF01609 Transposase DDE domain ACU11_11065 PF05598 Transposase domain (DUF772) ACU11_11075 PF08447 PAS fold ACU11_11075 PF00990 Diguanylate cyclase, GGDEF domain ACU11_11075 PF08448 PAS fold ACU11_11075 PF00563 EAL domain ACU11_11085 PF12951 Passenger-associated-transport-repeat ACU11_11090 PF00072 Response regulator receiver domain ACU11_11090 PF00196 Bacterial regulatory proteins, luxR family ACU11_11095 PF00512 His Kinase A (phospho-acceptor) domain ACU11_11095 PF13426 PAS domain ACU11_11095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU11_11095 PF08448 PAS fold ACU11_11095 PF00072 Response regulator receiver domain ACU11_11100 PF02321 Outer membrane efflux protein ACU11_11105 PF00873 AcrB/AcrD/AcrF family ACU11_11110 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ACU11_11115 PF03797 Autotransporter beta-domain ACU11_11115 PF00082 Subtilase family ACU11_11130 PF03377 TAL effector repeat ACU11_11135 PF01527 Transposase ACU11_11150 PF03377 TAL effector repeat ACU11_11175 PF05598 Transposase domain (DUF772) ACU11_11190 PF05598 Transposase domain (DUF772) ACU11_11190 PF01609 Transposase DDE domain ACU11_11195 PF01609 Transposase DDE domain ACU11_11195 PF05598 Transposase domain (DUF772) ACU11_11200 PF01609 Transposase DDE domain ACU11_11200 PF05598 Transposase domain (DUF772) ACU11_11215 PF14226 non-haem dioxygenase in morphine synthesis N-terminal ACU11_11215 PF03171 2OG-Fe(II) oxygenase superfamily ACU11_11220 PF05598 Transposase domain (DUF772) ACU11_11220 PF01609 Transposase DDE domain ACU11_11245 PF00873 AcrB/AcrD/AcrF family ACU11_11250 PF00529 HlyD membrane-fusion protein of T1SS ACU11_11250 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ACU11_11280 PF01527 Transposase ACU11_11285 PF13276 HTH-like domain ACU11_11300 PF00486 Transcriptional regulatory protein, C terminal ACU11_11300 PF00072 Response regulator receiver domain ACU11_11305 PF00034 Cytochrome c ACU11_11305 PF03150 Di-haem cytochrome c peroxidase ACU11_11310 PF00512 His Kinase A (phospho-acceptor) domain ACU11_11310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU11_11315 PF03466 LysR substrate binding domain ACU11_11315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACU11_11330 PF00069 Protein kinase domain ACU11_11370 PF16671 Actin cross-linking domain ACU11_11370 PF04717 Type VI secretion system, phage-baseplate injector ACU11_11380 PF05598 Transposase domain (DUF772) ACU11_11380 PF01609 Transposase DDE domain ACU11_11390 PF07724 AAA domain (Cdc48 subfamily) ACU11_11390 PF10431 C-terminal, D2-small domain, of ClpB protein ACU11_11390 PF00004 ATPase family associated with various cellular activities (AAA) ACU11_11390 PF17871 AAA lid domain ACU11_11415 PF05638 Type VI secretion system effector, Hcp ACU11_11430 PF16671 Actin cross-linking domain ACU11_11430 PF04717 Type VI secretion system, phage-baseplate injector ACU11_11465 PF05598 Transposase domain (DUF772) ACU11_11480 PF01527 Transposase ACU11_11490 PF01106 NifU-like domain ACU11_11495 PF01329 Pterin 4 alpha carbinolamine dehydratase ACU11_11510 PF11737 Protein of unknown function (DUF3300) ACU11_11515 PF00849 RNA pseudouridylate synthase ACU11_11515 PF01479 S4 domain ACU11_11520 PF00575 S1 RNA binding domain ACU11_11520 PF10150 Ribonuclease E/G family ACU11_11520 PF12111 Polyribonucleotide phosphorylase C terminal ACU11_11525 PF00196 Bacterial regulatory proteins, luxR family ACU11_11525 PF00072 Response regulator receiver domain ACU11_11540 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ACU11_11550 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ACU11_11550 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ACU11_11550 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ACU11_11560 PF17837 4'-phosphopantetheinyl transferase N-terminal domain ACU11_11560 PF01648 4'-phosphopantetheinyl transferase superfamily ACU11_11565 PF00501 AMP-binding enzyme ACU11_11565 PF13193 AMP-binding enzyme C-terminal domain ACU11_11565 PF00668 Condensation domain ACU11_11565 PF00550 Phosphopantetheine attachment site ACU11_11565 PF00975 Thioesterase domain ACU11_11570 PF00668 Condensation domain ACU11_11570 PF00550 Phosphopantetheine attachment site ACU11_11570 PF00975 Thioesterase domain ACU11_11570 PF00501 AMP-binding enzyme ACU11_11570 PF13193 AMP-binding enzyme C-terminal domain ACU11_11610 PF01066 CDP-alcohol phosphatidyltransferase ACU11_11615 PF08459 UvrC Helix-hairpin-helix N-terminal ACU11_11615 PF01541 GIY-YIG catalytic domain ACU11_11615 PF02151 UvrB/uvrC motif ACU11_11625 PF01451 Low molecular weight phosphotyrosine protein phosphatase ACU11_11630 PF02348 Cytidylyltransferase ACU11_11635 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ACU11_11640 PF00005 ABC transporter ACU11_11640 PF00664 ABC transporter transmembrane region ACU11_11650 PF01618 MotA/TolQ/ExbB proton channel family ACU11_11655 PF00753 Metallo-beta-lactamase superfamily ACU11_11655 PF03772 Competence protein ACU11_11670 PF00005 ABC transporter ACU11_11675 PF12704 MacB-like periplasmic core domain ACU11_11675 PF02687 FtsX-like permease family ACU11_11685 PF03937 Flavinator of succinate dehydrogenase ACU11_11690 PF13085 2Fe-2S iron-sulfur cluster binding domain ACU11_11700 PF02910 Fumarate reductase flavoprotein C-term ACU11_11700 PF00890 FAD binding domain ACU11_11705 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ACU11_11710 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ACU11_11715 PF01571 Aminomethyltransferase folate-binding domain ACU11_11720 PF17912 MalK OB fold domain ACU11_11720 PF00005 ABC transporter ACU11_11725 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ACU11_11725 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ACU11_11730 PF02685 Glucokinase ACU11_11735 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ACU11_11740 PF00920 Dehydratase family ACU11_11745 PF01081 KDPG and KHG aldolase ACU11_11755 PF13936 Helix-turn-helix domain ACU11_11755 PF00665 Integrase core domain ACU11_11760 PF00873 AcrB/AcrD/AcrF family ACU11_11765 PF00873 AcrB/AcrD/AcrF family ACU11_11770 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ACU11_11780 PF00034 Cytochrome c ACU11_11835 PF05598 Transposase domain (DUF772) ACU11_11835 PF01609 Transposase DDE domain ACU11_11855 PF05598 Transposase domain (DUF772) ACU11_11860 PF05598 Transposase domain (DUF772) ACU11_11930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU11_11930 PF09308 LuxQ, periplasmic ACU11_11930 PF00072 Response regulator receiver domain ACU11_11930 PF00512 His Kinase A (phospho-acceptor) domain ACU11_11935 PF17674 HHH domain ACU11_11935 PF16921 Tex protein YqgF-like domain ACU11_11935 PF00575 S1 RNA binding domain ACU11_11935 PF09371 Tex-like protein N-terminal domain ACU11_11945 PF00355 Rieske [2Fe-2S] domain ACU11_11945 PF01266 FAD dependent oxidoreductase ACU11_11960 PF00561 alpha/beta hydrolase fold ACU11_11970 PF01066 CDP-alcohol phosphatidyltransferase ACU11_11990 PF03618 Kinase/pyrophosphorylase ACU11_11995 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ACU11_11995 PF02896 PEP-utilising enzyme, TIM barrel domain ACU11_11995 PF00391 PEP-utilising enzyme, mobile domain ACU11_12000 PF05552 Conserved TM helix ACU11_12000 PF00924 Mechanosensitive ion channel ACU11_12005 PF00929 Exonuclease ACU11_12010 PF14437 MafB19-like deaminase ACU11_12015 PF02742 Iron dependent repressor, metal binding and dimerisation domain ACU11_12015 PF01325 Iron dependent repressor, N-terminal DNA binding domain ACU11_12020 PF01566 Natural resistance-associated macrophage protein ACU11_12040 PF03466 LysR substrate binding domain ACU11_12040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACU11_12045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACU11_12045 PF03466 LysR substrate binding domain ACU11_12050 PF03601 Conserved hypothetical protein 698 ACU11_12065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACU11_12065 PF03466 LysR substrate binding domain ACU11_12070 PF00361 Proton-conducting membrane transporter ACU11_12070 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus ACU11_12070 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ACU11_12075 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) ACU11_12080 PF00117 Glutamine amidotransferase class-I ACU11_12080 PF02540 NAD synthase ACU11_12080 PF00958 GMP synthase C terminal domain ACU11_12085 PF00571 CBS domain ACU11_12085 PF00478 IMP dehydrogenase / GMP reductase domain ACU11_12090 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ACU11_12090 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ACU11_12105 PF02254 TrkA-N domain ACU11_12105 PF00999 Sodium/hydrogen exchanger family ACU11_12110 PF00483 Nucleotidyl transferase ACU11_12115 PF02719 Polysaccharide biosynthesis protein ACU11_12120 PF00953 Glycosyl transferase family 4 ACU11_12125 PF18073 Rubredoxin metal binding domain ACU11_12135 PF00216 Bacterial DNA-binding protein ACU11_12140 PF00575 S1 RNA binding domain ACU11_12145 PF02224 Cytidylate kinase ACU11_12150 PF00444 Ribosomal protein L36 ACU11_12160 PF04371 Porphyromonas-type peptidyl-arginine deiminase ACU11_12165 PF00795 Carbon-nitrogen hydrolase ACU11_12190 PF00528 Binding-protein-dependent transport system inner membrane component ACU11_12195 PF00528 Binding-protein-dependent transport system inner membrane component ACU11_12215 PF00356 Bacterial regulatory proteins, lacI family ACU11_12225 PF03795 YCII-related domain ACU11_12230 PF02616 Segregation and condensation protein ScpA ACU11_12235 PF04079 Segregation and condensation complex subunit ScpB ACU11_12240 PF01479 S4 domain ACU11_12240 PF00849 RNA pseudouridylate synthase ACU11_12255 PF00795 Carbon-nitrogen hydrolase ACU11_12260 PF00155 Aminotransferase class I and II ACU11_12265 PF00005 ABC transporter ACU11_12270 PF03379 CcmB protein ACU11_12275 PF01578 Cytochrome C assembly protein ACU11_12285 PF03100 CcmE ACU11_12290 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal ACU11_12290 PF01578 Cytochrome C assembly protein ACU11_12295 PF08534 Redoxin ACU11_12300 PF03918 Cytochrome C biogenesis protein ACU11_12310 PF00561 alpha/beta hydrolase fold ACU11_12325 PF00005 ABC transporter ACU11_12325 PF00664 ABC transporter transmembrane region ACU11_12330 PF00005 ABC transporter ACU11_12330 PF00664 ABC transporter transmembrane region ACU11_12335 PF01654 Cytochrome bd terminal oxidase subunit I ACU11_12340 PF01654 Cytochrome bd terminal oxidase subunit I ACU11_12345 PF02322 Cytochrome bd terminal oxidase subunit II ACU11_12365 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain ACU11_12365 PF02129 X-Pro dipeptidyl-peptidase (S15 family) ACU11_12370 PF00171 Aldehyde dehydrogenase family ACU11_12375 PF01472 PUA domain ACU11_12375 PF00696 Amino acid kinase family ACU11_12390 PF00206 Lyase ACU11_12395 PF01118 Semialdehyde dehydrogenase, NAD binding domain ACU11_12405 PF00696 Amino acid kinase family ACU11_12405 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase ACU11_12410 PF01546 Peptidase family M20/M25/M40 ACU11_12410 PF07687 Peptidase dimerisation domain ACU11_12420 PF00764 Arginosuccinate synthase ACU11_12425 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ACU11_12425 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ACU11_12435 PF01406 tRNA synthetases class I (C) catalytic domain ACU11_12435 PF09190 DALR domain ACU11_12440 PF02657 Fe-S metabolism associated domain ACU11_12455 PF01258 Prokaryotic dksA/traR C4-type zinc finger ACU11_12465 PF01809 Putative membrane protein insertion efficiency factor ACU11_12470 PF01979 Amidohydrolase family ACU11_12475 PF01551 Peptidase family M23 ACU11_12475 PF08460 Bacterial SH3 domain ACU11_12510 PF02599 Global regulator protein family ACU11_12515 PF02272 DHHA1 domain ACU11_12515 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ACU11_12515 PF01411 tRNA synthetases class II (A) ACU11_12520 PF02631 RecX family ACU11_12525 PF00154 recA bacterial DNA recombination protein ACU11_12530 PF00717 Peptidase S24-like ACU11_12530 PF01726 LexA DNA binding domain ACU11_12535 PF03109 ABC1 family ACU11_12540 PF02464 Competence-damaged protein ACU11_12545 PF01926 50S ribosome-binding GTPase ACU11_12545 PF13167 GTP-binding GTPase N-terminal ACU11_12545 PF16360 GTP-binding GTPase Middle Region ACU11_12550 PF17209 Hfq protein ACU11_12560 PF00809 Pterin binding enzyme ACU11_12565 PF17862 AAA+ lid domain ACU11_12565 PF01434 Peptidase family M41 ACU11_12565 PF00004 ATPase family associated with various cellular activities (AAA) ACU11_12565 PF06480 FtsH Extracellular ACU11_12570 PF01728 FtsJ-like methyltransferase ACU11_12575 PF01985 CRS1 / YhbY (CRM) domain ACU11_12580 PF04430 Protein of unknown function (DUF498/DUF598) ACU11_12585 PF01476 LysM domain ACU11_12585 PF01551 Peptidase family M23 ACU11_12590 PF09335 SNARE associated Golgi protein ACU11_12600 PF01975 Survival protein SurE ACU11_12605 PF01713 Smr domain ACU11_12610 PF01142 tRNA pseudouridine synthase D (TruD) ACU11_12615 PF02542 YgbB family ACU11_12620 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ACU11_12625 PF04977 Septum formation initiator ACU11_12630 PF00113 Enolase, C-terminal TIM barrel domain ACU11_12630 PF03952 Enolase, N-terminal domain ACU11_12640 PF00793 DAHP synthetase I family ACU11_12645 PF00117 Glutamine amidotransferase class-I ACU11_12645 PF06418 CTP synthase N-terminus ACU11_12655 PF00204 DNA gyrase B ACU11_12655 PF00986 DNA gyrase B subunit, carboxyl terminus ACU11_12655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU11_12655 PF01751 Toprim domain ACU11_12670 PF01384 Phosphate transporter family ACU11_12680 PF01595 Cyclin M transmembrane N-terminal domain ACU11_12680 PF00571 CBS domain ACU11_12680 PF03471 Transporter associated domain ACU11_12695 PF00296 Luciferase-like monooxygenase ACU11_12700 PF00083 Sugar (and other) transporter ACU11_12705 PF00664 ABC transporter transmembrane region ACU11_12705 PF00005 ABC transporter ACU11_12710 PF00005 ABC transporter ACU11_12725 PF00534 Glycosyl transferases group 1 ACU11_12725 PF13579 Glycosyl transferase 4-like domain ACU11_12745 PF08241 Methyltransferase domain ACU11_12760 PF00535 Glycosyl transferase family 2 ACU11_12765 PF01943 Polysaccharide biosynthesis protein ACU11_12770 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ACU11_12790 PF05523 WxcM-like, C-terminal ACU11_12805 PF00034 Cytochrome c ACU11_12815 PF08281 Sigma-70, region 4 ACU11_12815 PF04542 Sigma-70 region 2 ACU11_12825 PF00082 Subtilase family ACU11_12830 PF01578 Cytochrome C assembly protein ACU11_12835 PF04995 Heme exporter protein D (CcmD) ACU11_12840 PF03100 CcmE ACU11_12845 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal ACU11_12845 PF01578 Cytochrome C assembly protein ACU11_12850 PF08534 Redoxin ACU11_12855 PF03918 Cytochrome C biogenesis protein ACU11_12875 PF05598 Transposase domain (DUF772) ACU11_12875 PF01609 Transposase DDE domain ACU11_12890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACU11_12890 PF00672 HAMP domain ACU11_12890 PF02203 Tar ligand binding domain homologue ACU11_12900 PF13276 HTH-like domain ACU11_12900 PF13683 Integrase core domain ACU11_12905 PF03377 TAL effector repeat ACU11_12920 PF00665 Integrase core domain ACU11_12920 PF13936 Helix-turn-helix domain ACU11_12930 PF05598 Transposase domain (DUF772) ACU11_12930 PF01609 Transposase DDE domain ACU11_12965 PF03466 LysR substrate binding domain ACU11_12965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACU11_12975 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ACU11_12975 PF02403 Seryl-tRNA synthetase N-terminal domain ACU11_12980 PF03544 Gram-negative bacterial TonB protein C-terminal ACU11_12990 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ACU11_12995 PF00800 Prephenate dehydratase ACU11_12995 PF01842 ACT domain ACU11_12995 PF01817 Chorismate mutase type II ACU11_13000 PF00266 Aminotransferase class-V ACU11_13005 PF00174 Oxidoreductase molybdopterin binding domain ACU11_13010 PF01794 Ferric reductase like transmembrane component ACU11_13035 PF00392 Bacterial regulatory proteins, gntR family ACU11_13035 PF07702 UTRA domain ACU11_13045 PF07969 Amidohydrolase family ACU11_13050 PF00221 Aromatic amino acid lyase ACU11_13060 PF01175 Urocanase Rossmann-like domain ACU11_13060 PF17391 Urocanase N-terminal domain ACU11_13060 PF17392 Urocanase C-terminal domain ACU11_13075 PF03377 TAL effector repeat ACU11_13080 PF01527 Transposase ACU11_13085 PF13683 Integrase core domain ACU11_13085 PF13276 HTH-like domain ACU11_13095 PF02151 UvrB/uvrC motif ACU11_13095 PF00271 Helicase conserved C-terminal domain ACU11_13095 PF17757 UvrB interaction domain ACU11_13095 PF04851 Type III restriction enzyme, res subunit ACU11_13095 PF12344 Ultra-violet resistance protein B ACU11_13100 PF00114 Pilin (bacterial filament) ACU11_13100 PF07963 Prokaryotic N-terminal methylation motif ACU11_13145 PF01555 DNA methylase ACU11_13200 PF00182 Chitinase class I ACU11_13370 PF05567 Neisseria PilC beta-propeller domain ACU11_13390 PF07963 Prokaryotic N-terminal methylation motif ACU11_13390 PF12019 Type II transport protein GspH ACU11_13395 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases ACU11_13395 PF03641 Possible lysine decarboxylase ACU11_13395 PF11892 Domain of unknown function (DUF3412) ACU11_13400 PF00593 TonB dependent receptor ACU11_13405 PF01914 MarC family integral membrane protein ACU11_13415 PF00462 Glutaredoxin ACU11_13420 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ACU11_13420 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ACU11_13425 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ACU11_13425 PF02222 ATP-grasp domain ACU11_13430 PF00731 AIR carboxylase ACU11_13440 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ACU11_13440 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ACU11_13450 PF00013 KH domain ACU11_13450 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ACU11_13450 PF01138 3' exoribonuclease family, domain 1 ACU11_13450 PF03725 3' exoribonuclease family, domain 2 ACU11_13450 PF00575 S1 RNA binding domain ACU11_13455 PF00312 Ribosomal protein S15 ACU11_13460 PF01509 TruB family pseudouridylate synthase (N terminal domain) ACU11_13460 PF16198 tRNA pseudouridylate synthase B C-terminal domain ACU11_13460 PF09157 Pseudouridine synthase II TruB, C-terminal ACU11_13465 PF02033 Ribosome-binding factor A ACU11_13470 PF04760 Translation initiation factor IF-2, N-terminal region ACU11_13470 PF00009 Elongation factor Tu GTP binding domain ACU11_13470 PF08364 Bacterial translation initiation factor IF-2 associated region ACU11_13470 PF11987 Translation-initiation factor 2 ACU11_13475 PF13184 NusA-like KH domain ACU11_13475 PF00575 S1 RNA binding domain ACU11_13475 PF08529 NusA N-terminal domain ACU11_13480 PF17384 RimP C-terminal SH3 domain ACU11_13480 PF02576 RimP N-terminal domain ACU11_13490 PF00361 Proton-conducting membrane transporter ACU11_13495 PF00361 Proton-conducting membrane transporter ACU11_13495 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus ACU11_13500 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ACU11_13500 PF00361 Proton-conducting membrane transporter ACU11_13505 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ACU11_13510 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ACU11_13515 PF12838 4Fe-4S dicluster domain ACU11_13520 PF00146 NADH dehydrogenase ACU11_13525 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ACU11_13525 PF00384 Molybdopterin oxidoreductase ACU11_13525 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal ACU11_13530 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ACU11_13530 PF10531 SLBB domain ACU11_13530 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ACU11_13540 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ACU11_13545 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ACU11_13550 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ACU11_13555 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ACU11_13565 PF03840 Preprotein translocase SecG subunit ACU11_13570 PF00121 Triosephosphate isomerase ACU11_13590 PF00990 Diguanylate cyclase, GGDEF domain ACU11_13590 PF03707 Bacterial signalling protein N terminal repeat ACU11_13590 PF00563 EAL domain ACU11_13605 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ACU11_13605 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ACU11_13605 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ACU11_13605 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ACU11_13610 PF17848 Acetyl-coA carboxylase zinc finger domain ACU11_13610 PF01039 Carboxyl transferase domain ACU11_13615 PF00290 Tryptophan synthase alpha chain ACU11_13625 PF00291 Pyridoxal-phosphate dependent enzyme ACU11_13630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACU11_13630 PF03466 LysR substrate binding domain ACU11_13635 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ACU11_13640 PF01416 tRNA pseudouridine synthase ACU11_13655 PF01118 Semialdehyde dehydrogenase, NAD binding domain ACU11_13655 PF02774 Semialdehyde dehydrogenase, dimerisation domain ACU11_13660 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ACU11_13660 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ACU11_13665 PF01264 Chorismate synthase ACU11_13670 PF05175 Methyltransferase small domain ACU11_13675 PF02630 SCO1/SenC ACU11_13680 PF02666 Phosphatidylserine decarboxylase ACU11_13690 PF05872 Bacterial protein of unknown function (DUF853) ACU11_13705 PF13276 HTH-like domain ACU11_13705 PF13683 Integrase core domain ACU11_13720 PF03449 Transcription elongation factor, N-terminal ACU11_13720 PF01272 Transcription elongation factor, GreA/GreB, C-term ACU11_13730 PF04055 Radical SAM superfamily ACU11_13730 PF18693 TRAM domain ACU11_13730 PF00919 Uncharacterized protein family UPF0004 ACU11_13735 PF01738 Dienelactone hydrolase family ACU11_13755 PF00692 dUTPase ACU11_13760 PF10609 NUBPL iron-transfer P-loop NTPase ACU11_13765 PF13340 Putative transposase of IS4/5 family (DUF4096) ACU11_13775 PF00990 Diguanylate cyclase, GGDEF domain ACU11_13785 PF00990 Diguanylate cyclase, GGDEF domain ACU11_13785 PF08448 PAS fold ACU11_13800 PF05598 Transposase domain (DUF772) ACU11_13800 PF01609 Transposase DDE domain ACU11_13805 PF00691 OmpA family ACU11_13805 PF05736 OprF membrane domain ACU11_13815 PF00875 DNA photolyase ACU11_13815 PF03441 FAD binding domain of DNA photolyase ACU11_13820 PF03796 DnaB-like helicase C terminal domain ACU11_13820 PF00772 DnaB-like helicase N terminal domain ACU11_13825 PF03358 NADPH-dependent FMN reductase ACU11_13830 PF13537 Glutamine amidotransferase domain ACU11_13830 PF00733 Asparagine synthase ACU11_13835 PF00043 Glutathione S-transferase, C-terminal domain ACU11_13835 PF02798 Glutathione S-transferase, N-terminal domain ACU11_13845 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACU11_13845 PF02770 Acyl-CoA dehydrogenase, middle domain ACU11_13845 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACU11_13860 PF01026 TatD related DNase ACU11_13865 PF00899 ThiF family ACU11_13880 PF00313 'Cold-shock' DNA-binding domain ACU11_13895 PF02253 Phospholipase A1 ACU11_13905 PF05681 Fumarate hydratase (Fumerase) ACU11_13905 PF05683 Fumarase C-terminus ACU11_13910 PF00005 ABC transporter ACU11_13915 PF00970 Oxidoreductase FAD-binding domain ACU11_13915 PF00175 Oxidoreductase NAD-binding domain ACU11_13920 PF00255 Glutathione peroxidase ACU11_13940 PF00082 Subtilase family ACU11_13960 PF12802 MarR family ACU11_13985 PF00854 POT family ACU11_13995 PF00933 Glycosyl hydrolase family 3 N terminal domain ACU11_13995 PF14310 Fibronectin type III-like domain ACU11_13995 PF01915 Glycosyl hydrolase family 3 C-terminal domain ACU11_14015 PF07690 Major Facilitator Superfamily ACU11_14020 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ACU11_14020 PF00529 HlyD membrane-fusion protein of T1SS ACU11_14025 PF02321 Outer membrane efflux protein ACU11_14040 PF03989 DNA gyrase C-terminal domain, beta-propeller ACU11_14040 PF00521 DNA gyrase/topoisomerase IV, subunit A ACU11_14045 PF00210 Ferritin-like domain ACU11_14050 PF01804 Penicillin amidase ACU11_14055 PF07715 TonB-dependent Receptor Plug Domain ACU11_14055 PF00593 TonB dependent receptor ACU11_14070 PF00733 Asparagine synthase ACU11_14070 PF13537 Glutamine amidotransferase domain ACU11_14075 PF07687 Peptidase dimerisation domain ACU11_14075 PF01546 Peptidase family M20/M25/M40 ACU11_14085 PF03960 ArsC family ACU11_14095 PF14602 Hexapeptide repeat of succinyl-transferase ACU11_14095 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal ACU11_14095 PF00132 Bacterial transferase hexapeptide (six repeats) ACU11_14100 PF01909 Nucleotidyltransferase domain ACU11_14100 PF08335 GlnD PII-uridylyltransferase ACU11_14100 PF01966 HD domain ACU11_14105 PF00557 Metallopeptidase family M24 ACU11_14140 PF00318 Ribosomal protein S2 ACU11_14145 PF00889 Elongation factor TS ACU11_14150 PF00072 Response regulator receiver domain ACU11_14150 PF00990 Diguanylate cyclase, GGDEF domain ACU11_14155 PF00696 Amino acid kinase family ACU11_14160 PF01765 Ribosome recycling factor ACU11_14165 PF01255 Putative undecaprenyl diphosphate synthase ACU11_14175 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ACU11_14175 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ACU11_14175 PF13288 DXP reductoisomerase C-terminal domain ACU11_14180 PF02163 Peptidase family M50 ACU11_14180 PF17820 PDZ domain ACU11_14185 PF01103 Surface antigen ACU11_14185 PF07244 Surface antigen variable number repeat ACU11_14190 PF01609 Transposase DDE domain ACU11_14190 PF05598 Transposase domain (DUF772) ACU11_14195 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ACU11_14195 PF00132 Bacterial transferase hexapeptide (six repeats) ACU11_14200 PF07977 FabA-like domain ACU11_14205 PF00132 Bacterial transferase hexapeptide (six repeats) ACU11_14205 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ACU11_14210 PF02684 Lipid-A-disaccharide synthetase ACU11_14215 PF01351 Ribonuclease HII ACU11_14220 PF07733 Bacterial DNA polymerase III alpha NTPase domain ACU11_14220 PF14579 Helix-hairpin-helix motif ACU11_14220 PF02811 PHP domain ACU11_14220 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ACU11_14220 PF01336 OB-fold nucleic acid binding domain ACU11_14225 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ACU11_14245 PF05598 Transposase domain (DUF772) ACU11_14270 PF03551 Transcriptional regulator PadR-like family ACU11_14280 PF05598 Transposase domain (DUF772) ACU11_14300 PF02592 Putative vitamin uptake transporter ACU11_14310 PF02574 Homocysteine S-methyltransferase ACU11_14315 PF00324 Amino acid permease ACU11_14320 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ACU11_14330 PF09334 tRNA synthetases class I (M) ACU11_14330 PF01588 Putative tRNA binding domain ACU11_14360 PF04545 Sigma-70, region 4 ACU11_14360 PF04542 Sigma-70 region 2 ACU11_14405 PF01042 Endoribonuclease L-PSP ACU11_14415 PF03706 Lysylphosphatidylglycerol synthase TM region ACU11_14415 PF09924 Uncharacterised conserved protein (DUF2156) ACU11_14445 PF07690 Major Facilitator Superfamily ACU11_14450 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ACU11_14460 PF03831 PhnA domain ACU11_14460 PF08274 PhnA Zinc-Ribbon ACU11_14470 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ACU11_14505 PF01258 Prokaryotic dksA/traR C4-type zinc finger ACU11_14515 PF07043 Protein of unknown function (DUF1328) ACU11_14520 PF01863 Protein of unknown function DUF45 ACU11_14525 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ACU11_14525 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ACU11_14530 PF03797 Autotransporter beta-domain ACU11_14530 PF00082 Subtilase family ACU11_14530 PF12951 Passenger-associated-transport-repeat ACU11_14535 PF00108 Thiolase, N-terminal domain ACU11_14535 PF02803 Thiolase, C-terminal domain ACU11_14565 PF04675 DNA ligase N terminus ACU11_14565 PF01068 ATP dependent DNA ligase domain ACU11_14565 PF04679 ATP dependent DNA ligase C terminal region ACU11_14575 PF04675 DNA ligase N terminus ACU11_14575 PF04679 ATP dependent DNA ligase C terminal region ACU11_14575 PF01068 ATP dependent DNA ligase domain ACU11_14580 PF00271 Helicase conserved C-terminal domain ACU11_14580 PF00270 DEAD/DEAH box helicase ACU11_14580 PF08494 DEAD/H associated ACU11_14595 PF00313 'Cold-shock' DNA-binding domain ACU11_14600 PF01048 Phosphorylase superfamily ACU11_14610 PF00933 Glycosyl hydrolase family 3 N terminal domain ACU11_14615 PF04244 Deoxyribodipyrimidine photo-lyase-related protein ACU11_14620 PF01593 Flavin containing amine oxidoreductase ACU11_14625 PF01323 DSBA-like thioredoxin domain ACU11_14635 PF05958 tRNA (Uracil-5-)-methyltransferase ACU11_14645 PF02565 Recombination protein O C terminal ACU11_14645 PF11967 Recombination protein O N terminal ACU11_14650 PF07650 KH domain ACU11_14650 PF01926 50S ribosome-binding GTPase ACU11_14655 PF14622 Ribonuclease-III-like ACU11_14655 PF00035 Double-stranded RNA binding motif ACU11_14665 PF10502 Signal peptidase, peptidase S26 ACU11_14670 PF00009 Elongation factor Tu GTP binding domain ACU11_14670 PF00679 Elongation factor G C-terminus ACU11_14670 PF03144 Elongation factor Tu domain 2 ACU11_14670 PF06421 GTP-binding protein LepA C-terminus ACU11_14675 PF13180 PDZ domain ACU11_14685 PF04542 Sigma-70 region 2 ACU11_14685 PF08281 Sigma-70, region 4 ACU11_14690 PF00378 Enoyl-CoA hydratase/isomerase ACU11_14690 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ACU11_14690 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ACU11_14695 PF01545 Cation efflux family ACU11_14700 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ACU11_14700 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ACU11_14705 PF00378 Enoyl-CoA hydratase/isomerase ACU11_14705 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ACU11_14705 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ACU11_14710 PF00378 Enoyl-CoA hydratase/isomerase ACU11_14715 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACU11_14715 PF02770 Acyl-CoA dehydrogenase, middle domain ACU11_14715 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACU11_14720 PF00171 Aldehyde dehydrogenase family ACU11_14725 PF09856 Predicted transcriptional regulator (DUF2083) ACU11_14725 PF06114 IrrE N-terminal-like domain ACU11_14725 PF01381 Helix-turn-helix ACU11_14765 PF17149 Periplasmic sensor domain found in signal transduction proteins ACU11_14765 PF00072 Response regulator receiver domain ACU11_14765 PF00512 His Kinase A (phospho-acceptor) domain ACU11_14765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU11_14765 PF00672 HAMP domain ACU11_14765 PF01627 Hpt domain ACU11_14770 PF00072 Response regulator receiver domain ACU11_14770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU11_14770 PF17149 Periplasmic sensor domain found in signal transduction proteins ACU11_14770 PF00512 His Kinase A (phospho-acceptor) domain ACU11_14770 PF00672 HAMP domain ACU11_14770 PF01627 Hpt domain ACU11_14775 PF00512 His Kinase A (phospho-acceptor) domain ACU11_14775 PF00072 Response regulator receiver domain ACU11_14775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU11_14775 PF09308 LuxQ, periplasmic ACU11_14780 PF17149 Periplasmic sensor domain found in signal transduction proteins ACU11_14780 PF00672 HAMP domain ACU11_14780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU11_14780 PF00512 His Kinase A (phospho-acceptor) domain ACU11_14780 PF01627 Hpt domain ACU11_14780 PF00072 Response regulator receiver domain ACU11_14785 PF04264 YceI-like domain ACU11_14815 PF03315 Serine dehydratase beta chain ACU11_14815 PF03313 Serine dehydratase alpha chain ACU11_14825 PF01053 Cys/Met metabolism PLP-dependent enzyme ACU11_14830 PF00561 alpha/beta hydrolase fold ACU11_14835 PF01476 LysM domain ACU11_14835 PF08525 Opacity-associated protein A N-terminal motif ACU11_14835 PF01551 Peptidase family M23 ACU11_14845 PF03006 Haemolysin-III related ACU11_14855 PF00571 CBS domain ACU11_14855 PF00478 IMP dehydrogenase / GMP reductase domain ACU11_14860 PF00535 Glycosyl transferase family 2 ACU11_14865 PF00912 Transglycosylase ACU11_14870 PF01430 Hsp33 protein ACU11_14880 PF07715 TonB-dependent Receptor Plug Domain ACU11_14880 PF00593 TonB dependent receptor ACU11_14885 PF00440 Bacterial regulatory proteins, tetR family ACU11_14895 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACU11_14895 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACU11_14895 PF09317 Domain of unknown function (DUF1974) ACU11_14920 PF01597 Glycine cleavage H-protein ACU11_14925 PF01571 Aminomethyltransferase folate-binding domain ACU11_14925 PF08669 Glycine cleavage T-protein C-terminal barrel domain ACU11_14935 PF01145 SPFH domain / Band 7 family ACU11_14935 PF16200 C-terminal region of band_7 ACU11_14940 PF02694 Uncharacterised BCR, YnfA/UPF0060 family ACU11_14945 PF03819 MazG nucleotide pyrophosphohydrolase domain ACU11_14950 PF00459 Inositol monophosphatase family ACU11_14955 PF00293 NUDIX domain ACU11_14960 PF00202 Aminotransferase class-III ACU11_14965 PF04452 RNA methyltransferase ACU11_14970 PF02685 Glucokinase ACU11_14985 PF00704 Glycosyl hydrolases family 18 ACU11_14985 PF01476 LysM domain ACU11_14990 PF07691 PA14 domain ACU11_14990 PF00728 Glycosyl hydrolase family 20, catalytic domain ACU11_14990 PF02838 Glycosyl hydrolase family 20, domain 2 ACU11_15000 PF14310 Fibronectin type III-like domain ACU11_15000 PF07691 PA14 domain ACU11_15000 PF00933 Glycosyl hydrolase family 3 N terminal domain ACU11_15000 PF01915 Glycosyl hydrolase family 3 C-terminal domain ACU11_15005 PF00664 ABC transporter transmembrane region ACU11_15005 PF00005 ABC transporter ACU11_15005 PF03412 Peptidase C39 family ACU11_15025 PF07971 Glycosyl hydrolase family 92 ACU11_15025 PF17678 Glycosyl hydrolase family 92 N-terminal domain ACU11_15030 PF01301 Glycosyl hydrolases family 35 ACU11_15065 PF03932 CutC family ACU11_15070 PF01112 Asparaginase ACU11_15100 PF04717 Type VI secretion system, phage-baseplate injector ACU11_15100 PF16671 Actin cross-linking domain ACU11_15145 PF13302 Acetyltransferase (GNAT) domain ACU11_15160 PF01584 CheW-like domain ACU11_15160 PF00072 Response regulator receiver domain ACU11_15160 PF01627 Hpt domain ACU11_15160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU11_15165 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term ACU11_15165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACU11_15170 PF01584 CheW-like domain ACU11_15175 PF00072 Response regulator receiver domain ACU11_15180 PF00072 Response regulator receiver domain ACU11_15185 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ACU11_15185 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ACU11_15195 PF03747 ADP-ribosylglycohydrolase ACU11_15200 PF00814 Glycoprotease family ACU11_15205 PF04851 Type III restriction enzyme, res subunit ACU11_15205 PF13307 Helicase C-terminal domain ACU11_15215 PF00912 Transglycosylase ACU11_15215 PF00905 Penicillin binding protein transpeptidase domain ACU11_15215 PF14814 Bifunctional transglycosylase second domain ACU11_15220 PF00535 Glycosyl transferase family 2 ACU11_15230 PF13291 ACT domain ACU11_15230 PF04607 Region found in RelA / SpoT proteins ACU11_15230 PF02824 TGS domain ACU11_15235 PF12706 Beta-lactamase superfamily domain ACU11_15240 PF03070 TENA/THI-4/PQQC family ACU11_15245 PF05402 Coenzyme PQQ synthesis protein D (PqqD) ACU11_15250 PF04055 Radical SAM superfamily ACU11_15250 PF13186 Iron-sulfur cluster-binding domain ACU11_15270 PF02685 Glucokinase ACU11_15275 PF02685 Glucokinase ACU11_15285 PF00270 DEAD/DEAH box helicase ACU11_15285 PF04408 Helicase associated domain (HA2) ACU11_15285 PF00271 Helicase conserved C-terminal domain ACU11_15285 PF11898 Domain of unknown function (DUF3418) ACU11_15285 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ACU11_15290 PF00210 Ferritin-like domain ACU11_15295 PF09382 RQC domain ACU11_15295 PF00570 HRDC domain ACU11_15295 PF00270 DEAD/DEAH box helicase ACU11_15295 PF16124 RecQ zinc-binding ACU11_15295 PF00271 Helicase conserved C-terminal domain ACU11_15310 PF01479 S4 domain ACU11_15310 PF00849 RNA pseudouridylate synthase ACU11_15320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACU11_15320 PF00672 HAMP domain ACU11_15320 PF02203 Tar ligand binding domain homologue ACU11_15345 PF06508 Queuosine biosynthesis protein QueC ACU11_15510 PF00182 Chitinase class I ACU11_15565 PF01555 DNA methylase ACU11_15620 PF04055 Radical SAM superfamily ACU11_15630 PF00691 OmpA family ACU11_15635 PF07676 WD40-like Beta Propeller Repeat ACU11_15635 PF04052 TolB amino-terminal domain ACU11_15645 PF02472 Biopolymer transport protein ExbD/TolR ACU11_15650 PF01618 MotA/TolQ/ExbB proton channel family ACU11_15655 PF03061 Thioesterase superfamily ACU11_15660 PF05491 RuvB C-terminal winged helix domain ACU11_15660 PF17864 RuvB AAA lid domain ACU11_15660 PF05496 Holliday junction DNA helicase RuvB P-loop domain ACU11_15665 PF02705 K+ potassium transporter ACU11_15670 PF07499 RuvA, C-terminal domain ACU11_15670 PF01330 RuvA N terminal domain ACU11_15675 PF02075 Crossover junction endodeoxyribonuclease RuvC ACU11_15680 PF01709 Transcriptional regulator ACU11_15695 PF02938 GAD domain ACU11_15695 PF00152 tRNA synthetases class II (D, K and N) ACU11_15695 PF01336 OB-fold nucleic acid binding domain ACU11_15710 PF07690 Major Facilitator Superfamily ACU11_15715 PF04185 Phosphoesterase family ACU11_15715 PF05506 Domain of unknown function (DUF756) ACU11_15725 PF07859 alpha/beta hydrolase fold ACU11_15725 PF13472 GDSL-like Lipase/Acylhydrolase family ACU11_15735 PF03466 LysR substrate binding domain ACU11_15735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACU11_15745 PF12848 ABC transporter ACU11_15745 PF00005 ABC transporter ACU11_15750 PF07715 TonB-dependent Receptor Plug Domain ACU11_15750 PF00593 TonB dependent receptor ACU11_15760 PF00593 TonB dependent receptor ACU11_15760 PF07715 TonB-dependent Receptor Plug Domain ACU11_15765 PF00593 TonB dependent receptor ACU11_15765 PF07715 TonB-dependent Receptor Plug Domain ACU11_15775 PF00999 Sodium/hydrogen exchanger family ACU11_15775 PF02254 TrkA-N domain ACU11_15790 PF00593 TonB dependent receptor ACU11_15790 PF07715 TonB-dependent Receptor Plug Domain ACU11_15790 PF07660 Secretin and TonB N terminus short domain ACU11_15800 PF06276 Ferric iron reductase FhuF-like transporter ACU11_15800 PF04183 IucA / IucC family ACU11_15805 PF07690 Major Facilitator Superfamily ACU11_15815 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ACU11_15815 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ACU11_15820 PF02654 Cobalamin-5-phosphate synthase ACU11_15830 PF02277 Phosphoribosyltransferase ACU11_15835 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase ACU11_15840 PF00155 Aminotransferase class I and II ACU11_15845 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP ACU11_15845 PF12557 Cob(I)alamin adenosyltransferase N terminal ACU11_15860 PF07715 TonB-dependent Receptor Plug Domain ACU11_15860 PF00593 TonB dependent receptor ACU11_15865 PF13683 Integrase core domain ACU11_15865 PF13276 HTH-like domain ACU11_15870 PF01527 Transposase ACU11_15875 PF00004 ATPase family associated with various cellular activities (AAA) ACU11_15875 PF02861 Clp amino terminal domain, pathogenicity island component ACU11_15875 PF17871 AAA lid domain ACU11_15875 PF10431 C-terminal, D2-small domain, of ClpB protein ACU11_15875 PF07724 AAA domain (Cdc48 subfamily) ACU11_15880 PF01541 GIY-YIG catalytic domain ACU11_15890 PF05190 MutS family domain IV ACU11_15890 PF05188 MutS domain II ACU11_15890 PF01624 MutS domain I ACU11_15890 PF00488 MutS domain V ACU11_15890 PF05192 MutS domain III ACU11_15900 PF00141 Peroxidase ACU11_15905 PF01479 S4 domain ACU11_15910 PF13936 Helix-turn-helix domain ACU11_15910 PF00665 Integrase core domain ACU11_15915 PF01554 MatE ACU11_15920 PF01245 Ribosomal protein L19 ACU11_15925 PF01746 tRNA (Guanine-1)-methyltransferase ACU11_15930 PF01782 RimM N-terminal domain ACU11_15930 PF05239 PRC-barrel domain ACU11_15935 PF00886 Ribosomal protein S16 ACU11_15945 PF03060 Nitronate monooxygenase ACU11_15960 PF00448 SRP54-type protein, GTPase domain ACU11_15960 PF02978 Signal peptide binding domain ACU11_15960 PF02881 SRP54-type protein, helical bundle domain ACU11_15970 PF01578 Cytochrome C assembly protein ACU11_15975 PF01263 Aldose 1-epimerase ACU11_15980 PF06964 Alpha-L-arabinofuranosidase C-terminal domain ACU11_15995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU11_15995 PF00512 His Kinase A (phospho-acceptor) domain ACU11_15995 PF08448 PAS fold ACU11_15995 PF13188 PAS domain ACU11_15995 PF00072 Response regulator receiver domain ACU11_16000 PF00072 Response regulator receiver domain ACU11_16000 PF01627 Hpt domain ACU11_16000 PF00512 His Kinase A (phospho-acceptor) domain ACU11_16000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU11_16000 PF00672 HAMP domain ACU11_16000 PF17149 Periplasmic sensor domain found in signal transduction proteins ACU11_16010 PF13581 Histidine kinase-like ATPase domain ACU11_16015 PF01740 STAS domain ACU11_16020 PF08678 Rsbr N terminal ACU11_16020 PF01740 STAS domain ACU11_16030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU11_16030 PF00183 Hsp90 protein ACU11_16035 PF12833 Helix-turn-helix domain ACU11_16055 PF18073 Rubredoxin metal binding domain ACU11_16060 PF01527 Transposase ACU11_16090 PF04717 Type VI secretion system, phage-baseplate injector ACU11_16100 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ACU11_16105 PF00510 Cytochrome c oxidase subunit III ACU11_16110 PF00115 Cytochrome C and Quinol oxidase polypeptide I ACU11_16115 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ACU11_16115 PF06481 COX Aromatic Rich Motif ACU11_16125 PF02401 LytB protein ACU11_16130 PF01252 Signal peptidase (SPase) II ACU11_16135 PF00133 tRNA synthetases class I (I, L, M and V) ACU11_16135 PF06827 Zinc finger found in FPG and IleRS ACU11_16135 PF08264 Anticodon-binding domain of tRNA ACU11_16140 PF01687 Riboflavin kinase ACU11_16140 PF06574 FAD synthetase ACU11_16145 PF03023 Lipid II flippase MurJ ACU11_16150 PF01649 Ribosomal protein S20 ACU11_16155 PF01926 50S ribosome-binding GTPase ACU11_16155 PF01018 GTP1/OBG ACU11_16160 PF01016 Ribosomal L27 protein ACU11_16165 PF00829 Ribosomal prokaryotic L21 protein ACU11_16170 PF17755 UvrA DNA-binding domain ACU11_16170 PF00005 ABC transporter ACU11_16170 PF17760 UvrA interaction domain ACU11_16185 PF00378 Enoyl-CoA hydratase/isomerase ACU11_16200 PF04542 Sigma-70 region 2 ACU11_16200 PF08281 Sigma-70, region 4 ACU11_16215 PF04377 Arginine-tRNA-protein transferase, C terminus ACU11_16215 PF04376 Arginine-tRNA-protein transferase, N terminus ACU11_16230 PF13340 Putative transposase of IS4/5 family (DUF4096) ACU11_16250 PF00593 TonB dependent receptor ACU11_16250 PF07715 TonB-dependent Receptor Plug Domain ACU11_16260 PF02358 Trehalose-phosphatase ACU11_16265 PF00723 Glycosyl hydrolases family 15 ACU11_16270 PF00982 Glycosyltransferase family 20 ACU11_16275 PF01011 PQQ enzyme repeat ACU11_16280 PF00672 HAMP domain ACU11_16280 PF02203 Tar ligand binding domain homologue ACU11_16280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACU11_16285 PF04134 Protein of unknown function, DUF393 ACU11_16300 PF00849 RNA pseudouridylate synthase ACU11_16305 PF13525 Outer membrane lipoprotein ACU11_16310 PF00795 Carbon-nitrogen hydrolase ACU11_16310 PF02540 NAD synthase ACU11_16320 PF02629 CoA binding domain ACU11_16320 PF00549 CoA-ligase ACU11_16325 PF00549 CoA-ligase ACU11_16325 PF08442 ATP-grasp domain ACU11_16330 PF00512 His Kinase A (phospho-acceptor) domain ACU11_16330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU11_16335 PF02954 Bacterial regulatory protein, Fis family ACU11_16335 PF00072 Response regulator receiver domain ACU11_16335 PF00158 Sigma-54 interaction domain ACU11_16340 PF02661 Fic/DOC family ACU11_16340 PF18543 Intracellular delivery domain ACU11_16345 PF00437 Type II/IV secretion system protein ACU11_16345 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ACU11_16360 PF00884 Sulfatase ACU11_16360 PF08019 Phosphoethanolamine transferase EptA/EptB ACU11_16365 PF00114 Pilin (bacterial filament) ACU11_16365 PF07963 Prokaryotic N-terminal methylation motif ACU11_16370 PF00482 Type II secretion system (T2SS), protein F ACU11_16375 PF01478 Type IV leader peptidase family ACU11_16375 PF06750 Bacterial Peptidase A24 N-terminal domain ACU11_16380 PF01121 Dephospho-CoA kinase ACU11_16385 PF05598 Transposase domain (DUF772) ACU11_16385 PF01609 Transposase DDE domain ACU11_16390 PF03527 RHS protein ACU11_16395 PF05598 Transposase domain (DUF772) ACU11_16400 PF05598 Transposase domain (DUF772) ACU11_16405 PF05598 Transposase domain (DUF772) ACU11_16415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU11_16415 PF00512 His Kinase A (phospho-acceptor) domain ACU11_16415 PF00989 PAS fold ACU11_16415 PF11808 Phosphate regulon sensor protein PhoR ACU11_16420 PF00072 Response regulator receiver domain ACU11_16420 PF00486 Transcriptional regulatory protein, C terminal ACU11_16430 PF18030 RimK PreATP-grasp domain ACU11_16430 PF08443 RimK-like ATP-grasp domain ACU11_16435 PF00128 Alpha amylase, catalytic domain ACU11_16435 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ACU11_16460 PF01609 Transposase DDE domain ACU11_16460 PF05598 Transposase domain (DUF772) ACU11_16490 PF16671 Actin cross-linking domain ACU11_16490 PF04717 Type VI secretion system, phage-baseplate injector ACU11_16505 PF03797 Autotransporter beta-domain ACU11_16505 PF00657 GDSL-like Lipase/Acylhydrolase ACU11_16515 PF05690 Thiazole biosynthesis protein ThiG ACU11_16520 PF02390 Putative methyltransferase ACU11_16525 PF03600 Citrate transporter ACU11_16525 PF02080 TrkA-C domain ACU11_16540 PF01557 Fumarylacetoacetate (FAA) hydrolase family ACU11_16545 PF01741 Large-conductance mechanosensitive channel, MscL ACU11_16555 PF13683 Integrase core domain ACU11_16555 PF13276 HTH-like domain ACU11_16560 PF01527 Transposase ACU11_16570 PF00588 SpoU rRNA Methylase family ACU11_16570 PF08032 RNA 2'-O ribose methyltransferase substrate binding ACU11_16590 PF11838 ERAP1-like C-terminal domain ACU11_16590 PF01433 Peptidase family M1 domain ACU11_16595 PF00873 AcrB/AcrD/AcrF family ACU11_16600 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ACU11_16600 PF00529 HlyD membrane-fusion protein of T1SS ACU11_16605 PF00009 Elongation factor Tu GTP binding domain ACU11_16610 PF01507 Phosphoadenosine phosphosulfate reductase family ACU11_16615 PF00175 Oxidoreductase NAD-binding domain ACU11_16615 PF00258 Flavodoxin ACU11_16615 PF00667 FAD binding domain ACU11_16620 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ACU11_16620 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ACU11_16625 PF01507 Phosphoadenosine phosphosulfate reductase family ACU11_16645 PF01627 Hpt domain ACU11_16645 PF00072 Response regulator receiver domain ACU11_16645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU11_16645 PF00512 His Kinase A (phospho-acceptor) domain ACU11_16645 PF00672 HAMP domain ACU11_16655 PF03466 LysR substrate binding domain ACU11_16655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACU11_16660 PF14824 Sirohaem biosynthesis protein central ACU11_16660 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ACU11_16660 PF10414 Sirohaem synthase dimerisation region ACU11_16665 PF00291 Pyridoxal-phosphate dependent enzyme ACU11_16675 PF01661 Macro domain ACU11_16680 PF00274 Fructose-bisphosphate aldolase class-I ACU11_16685 PF02887 Pyruvate kinase, alpha/beta domain ACU11_16685 PF00224 Pyruvate kinase, barrel domain ACU11_16695 PF00162 Phosphoglycerate kinase ACU11_16705 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ACU11_16705 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ACU11_16720 PF00753 Metallo-beta-lactamase superfamily ACU11_16720 PF04273 Putative phosphatase (DUF442) ACU11_16730 PF00528 Binding-protein-dependent transport system inner membrane component ACU11_16735 PF03459 TOBE domain ACU11_16735 PF00005 ABC transporter ACU11_16810 PF05598 Transposase domain (DUF772) ACU11_16830 PF02779 Transketolase, pyrimidine binding domain ACU11_16830 PF00456 Transketolase, thiamine diphosphate binding domain ACU11_16830 PF02780 Transketolase, C-terminal domain ACU11_16840 PF01527 Transposase ACU11_16850 PF05598 Transposase domain (DUF772) ACU11_16865 PF07584 Aerotolerance regulator N-terminal ACU11_16865 PF00092 von Willebrand factor type A domain ACU11_16885 PF07726 ATPase family associated with various cellular activities (AAA) ACU11_16885 PF17863 AAA lid domain ACU11_16890 PF07660 Secretin and TonB N terminus short domain ACU11_16890 PF00263 Bacterial type II and III secretion system protein ACU11_16890 PF03958 Bacterial type II/III secretion system short domain ACU11_16890 PF11741 AMIN domain ACU11_16915 PF00905 Penicillin binding protein transpeptidase domain ACU11_16915 PF00912 Transglycosylase ACU11_16915 PF17092 Penicillin-binding protein OB-like domain ACU11_16925 PF00285 Citrate synthase, C-terminal domain ACU11_16930 PF01197 Ribosomal protein L31 ACU11_16935 PF01156 Inosine-uridine preferring nucleoside hydrolase ACU11_16940 PF17191 RecG wedge domain ACU11_16940 PF00271 Helicase conserved C-terminal domain ACU11_16940 PF00270 DEAD/DEAH box helicase ACU11_16945 PF01042 Endoribonuclease L-PSP ACU11_16950 PF02824 TGS domain ACU11_16950 PF04607 Region found in RelA / SpoT proteins ACU11_16950 PF13291 ACT domain ACU11_16955 PF01192 RNA polymerase Rpb6 ACU11_16960 PF00625 Guanylate kinase ACU11_16965 PF08340 Domain of unknown function (DUF1732) ACU11_16965 PF03755 YicC-like family, N-terminal region ACU11_16970 PF03725 3' exoribonuclease family, domain 2 ACU11_16970 PF01138 3' exoribonuclease family, domain 1 ACU11_16975 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ACU11_16980 PF01725 Ham1 family ACU11_16985 PF04055 Radical SAM superfamily ACU11_16985 PF06969 HemN C-terminal domain ACU11_17000 PF00557 Metallopeptidase family M24 ACU11_17010 PF05195 Aminopeptidase P, N-terminal domain ACU11_17010 PF00557 Metallopeptidase family M24 ACU11_17015 PF03695 Uncharacterised protein family (UPF0149) ACU11_17025 PF05164 Cell division protein ZapA ACU11_17030 PF01812 5-formyltetrahydrofolate cyclo-ligase family ACU11_17040 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ACU11_17050 PF13369 Transglutaminase-like superfamily ACU11_17055 PF00301 Rubredoxin ACU11_17060 PF02581 Thiamine monophosphate synthase ACU11_17070 PF00202 Aminotransferase class-III ACU11_17085 PF00127 Copper binding proteins, plastocyanin/azurin family ACU11_17095 PF00155 Aminotransferase class I and II ACU11_17110 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ACU11_17110 PF00034 Cytochrome c ACU11_17115 PF01593 Flavin containing amine oxidoreductase ACU11_17130 PF00202 Aminotransferase class-III ACU11_17135 PF00027 Cyclic nucleotide-binding domain ACU11_17135 PF00520 Ion transport protein ACU11_17170 PF01062 Bestrophin, RFP-TM, chloride channel ACU11_17180 PF01225 Mur ligase family, catalytic domain ACU11_17180 PF02875 Mur ligase family, glutamate ligase domain ACU11_17180 PF08245 Mur ligase middle domain ACU11_17190 PF00365 Phosphofructokinase ACU11_17215 PF03030 Inorganic H+ pyrophosphatase ACU11_17225 PF00719 Inorganic pyrophosphatase ACU11_17235 PF07715 TonB-dependent Receptor Plug Domain ACU11_17235 PF00593 TonB dependent receptor ACU11_17240 PF12833 Helix-turn-helix domain ACU11_17245 PF18500 CadC C-terminal domain 1 ACU11_17245 PF00486 Transcriptional regulatory protein, C terminal ACU11_17250 PF13667 ThiC-associated domain ACU11_17250 PF01964 Radical SAM ThiC family ACU11_17255 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ACU11_17255 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ACU11_17260 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ACU11_17260 PF00205 Thiamine pyrophosphate enzyme, central domain ACU11_17260 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ACU11_17270 PF00291 Pyridoxal-phosphate dependent enzyme ACU11_17275 PF08502 LeuA allosteric (dimerisation) domain ACU11_17275 PF00682 HMGL-like ACU11_17280 PF00180 Isocitrate/isopropylmalate dehydrogenase ACU11_17285 PF08241 Methyltransferase domain ACU11_17290 PF00694 Aconitase C-terminal domain ACU11_17295 PF00330 Aconitase family (aconitate hydratase) ACU11_17300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACU11_17305 PF17158 Membrane-associated sensor, integral membrane domain ACU11_17305 PF00990 Diguanylate cyclase, GGDEF domain ACU11_17320 PF02321 Outer membrane efflux protein ACU11_17325 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ACU11_17330 PF03279 Bacterial lipid A biosynthesis acyltransferase ACU11_17360 PF03949 Malic enzyme, NAD binding domain ACU11_17360 PF00390 Malic enzyme, N-terminal domain ACU11_17360 PF01515 Phosphate acetyl/butaryl transferase ACU11_17365 PF00375 Sodium:dicarboxylate symporter family ACU11_17375 PF00512 His Kinase A (phospho-acceptor) domain ACU11_17375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU11_17380 PF07690 Major Facilitator Superfamily ACU11_17390 PF03466 LysR substrate binding domain ACU11_17390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACU11_17415 PF00196 Bacterial regulatory proteins, luxR family ACU11_17415 PF00072 Response regulator receiver domain ACU11_17425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU11_17425 PF00512 His Kinase A (phospho-acceptor) domain ACU11_17425 PF08521 Two-component sensor kinase N-terminal ACU11_17430 PF00486 Transcriptional regulatory protein, C terminal ACU11_17430 PF00072 Response regulator receiver domain ACU11_17440 PF03600 Citrate transporter ACU11_17445 PF00106 short chain dehydrogenase ACU11_17450 PF00356 Bacterial regulatory proteins, lacI family ACU11_17455 PF05598 Transposase domain (DUF772) ACU11_17470 PF00128 Alpha amylase, catalytic domain ACU11_17485 PF03193 RsgA GTPase ACU11_17490 PF00155 Aminotransferase class I and II ACU11_17505 PF01522 Polysaccharide deacetylase ACU11_17510 PF00462 Glutaredoxin ACU11_17530 PF01979 Amidohydrolase family ACU11_17535 PF01979 Amidohydrolase family ACU11_17555 PF01327 Polypeptide deformylase ACU11_17560 PF03960 ArsC family ACU11_17580 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ACU11_17580 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ACU11_17615 PF00593 TonB dependent receptor ACU11_17615 PF07715 TonB-dependent Receptor Plug Domain ACU11_17625 PF00392 Bacterial regulatory proteins, gntR family ACU11_17625 PF07702 UTRA domain ACU11_17640 PF00263 Bacterial type II and III secretion system protein ACU11_17640 PF03958 Bacterial type II/III secretion system short domain ACU11_17650 PF10741 Type II secretion system (T2SS), protein M subtype b ACU11_17655 PF05137 Fimbrial assembly protein (PilN) ACU11_17660 PF03934 Type II secretion system (T2SS), protein K ACU11_17670 PF07963 Prokaryotic N-terminal methylation motif ACU11_17675 PF12019 Type II transport protein GspH ACU11_17680 PF08334 Type II secretion system (T2SS), protein G ACU11_17685 PF00482 Type II secretion system (T2SS), protein F ACU11_17690 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ACU11_17690 PF00437 Type II/IV secretion system protein ACU11_17695 PF04151 Bacterial pre-peptidase C-terminal domain ACU11_17695 PF00082 Subtilase family ACU11_17700 PF03895 YadA-like membrane anchor domain ACU11_17700 PF13018 Extended Signal Peptide of Type V secretion system ACU11_17700 PF05662 Coiled stalk of trimeric autotransporter adhesin ACU11_17700 PF05658 Head domain of trimeric autotransporter adhesin ACU11_17705 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal ACU11_17705 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ACU11_17705 PF02769 AIR synthase related protein, C-terminal domain ACU11_17710 PF10411 Disulfide bond isomerase protein N-terminus ACU11_17710 PF13098 Thioredoxin-like domain ACU11_17715 PF02899 Phage integrase, N-terminal SAM-like domain ACU11_17715 PF00589 Phage integrase family ACU11_17730 PF03739 Lipopolysaccharide export system permease LptF/LptG ACU11_17740 PF02789 Cytosol aminopeptidase family, N-terminal domain ACU11_17740 PF00883 Cytosol aminopeptidase family, catalytic domain ACU11_17755 PF00133 tRNA synthetases class I (I, L, M and V) ACU11_17755 PF10458 Valyl tRNA synthetase tRNA binding arm ACU11_17755 PF08264 Anticodon-binding domain of tRNA ACU11_17760 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain ACU11_17760 PF01464 Transglycosylase SLT domain ACU11_17765 PF00544 Pectate lyase ACU11_17780 PF01066 CDP-alcohol phosphatidyltransferase ACU11_17790 PF03129 Anticodon binding domain ACU11_17790 PF04073 Aminoacyl-tRNA editing domain ACU11_17790 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ACU11_17795 PF00816 H-NS histone family ACU11_17805 PF02405 Permease MlaE ACU11_17810 PF00005 ABC transporter ACU11_17815 PF02470 MlaD protein ACU11_17815 PF03886 ABC-type transport auxiliary lipoprotein component ACU11_17835 PF05045 Rhamnan synthesis protein F ACU11_17835 PF14307 Glycosyltransferase WbsX ACU11_17840 PF01144 Coenzyme A transferase ACU11_17845 PF01144 Coenzyme A transferase ACU11_17850 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ACU11_17850 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ACU11_17850 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ACU11_17850 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ACU11_17855 PF00483 Nucleotidyl transferase ACU11_17855 PF01050 Mannose-6-phosphate isomerase ACU11_17860 PF04321 RmlD substrate binding domain ACU11_17865 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase ACU11_17870 PF00483 Nucleotidyl transferase ACU11_17875 PF16363 GDP-mannose 4,6 dehydratase ACU11_17880 PF01012 Electron transfer flavoprotein domain ACU11_17885 PF00766 Electron transfer flavoprotein FAD-binding domain ACU11_17885 PF01012 Electron transfer flavoprotein domain ACU11_17895 PF01040 UbiA prenyltransferase family ACU11_17900 PF01565 FAD binding domain ACU11_17900 PF04030 D-arabinono-1,4-lactone oxidase ACU11_17905 PF00106 short chain dehydrogenase ACU11_17915 PF01370 NAD dependent epimerase/dehydratase family ACU11_17920 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ACU11_17920 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACU11_17960 PF01209 ubiE/COQ5 methyltransferase family ACU11_17970 PF05045 Rhamnan synthesis protein F ACU11_17970 PF14307 Glycosyltransferase WbsX ACU11_17975 PF00535 Glycosyl transferase family 2 ACU11_17980 PF00132 Bacterial transferase hexapeptide (six repeats) ACU11_17985 PF00005 ABC transporter ACU11_17995 PF01053 Cys/Met metabolism PLP-dependent enzyme ACU11_18000 PF00291 Pyridoxal-phosphate dependent enzyme ACU11_18000 PF00571 CBS domain ACU11_18020 PF00437 Type II/IV secretion system protein ACU11_18025 PF02798 Glutathione S-transferase, N-terminal domain ACU11_18025 PF14497 Glutathione S-transferase, C-terminal domain ACU11_18035 PF00270 DEAD/DEAH box helicase ACU11_18035 PF00271 Helicase conserved C-terminal domain ACU11_18040 PF01242 6-pyruvoyl tetrahydropterin synthase ACU11_18055 PF13185 GAF domain ACU11_18065 PF13419 Haloacid dehalogenase-like hydrolase ACU11_18070 PF00817 impB/mucB/samB family ACU11_18070 PF11799 impB/mucB/samB family C-terminal domain ACU11_18075 PF07977 FabA-like domain ACU11_18080 PF02801 Beta-ketoacyl synthase, C-terminal domain ACU11_18080 PF00109 Beta-ketoacyl synthase, N-terminal domain ACU11_18090 PF01432 Peptidase family M3 ACU11_18110 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ACU11_18120 PF05598 Transposase domain (DUF772) ACU11_18135 PF01380 SIS domain ACU11_18140 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ACU11_18145 PF00005 ABC transporter ACU11_18155 PF12704 MacB-like periplasmic core domain ACU11_18155 PF00005 ABC transporter ACU11_18155 PF02687 FtsX-like permease family ACU11_18160 PF00005 ABC transporter ACU11_18160 PF02687 FtsX-like permease family ACU11_18160 PF12704 MacB-like periplasmic core domain ACU11_18165 PF12704 MacB-like periplasmic core domain ACU11_18165 PF00005 ABC transporter ACU11_18165 PF02687 FtsX-like permease family ACU11_18170 PF02954 Bacterial regulatory protein, Fis family ACU11_18170 PF00072 Response regulator receiver domain ACU11_18170 PF00158 Sigma-54 interaction domain ACU11_18175 PF00989 PAS fold ACU11_18175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU11_18175 PF00512 His Kinase A (phospho-acceptor) domain ACU11_18180 PF00132 Bacterial transferase hexapeptide (six repeats) ACU11_18180 PF14602 Hexapeptide repeat of succinyl-transferase ACU11_18180 PF12804 MobA-like NTP transferase domain ACU11_18190 PF01817 Chorismate mutase type II ACU11_18195 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ACU11_18200 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ACU11_18200 PF02874 ATP synthase alpha/beta family, beta-barrel domain ACU11_18205 PF00231 ATP synthase ACU11_18210 PF00306 ATP synthase alpha/beta chain, C terminal domain ACU11_18210 PF02874 ATP synthase alpha/beta family, beta-barrel domain ACU11_18210 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ACU11_18215 PF00213 ATP synthase delta (OSCP) subunit ACU11_18220 PF00430 ATP synthase B/B' CF(0) ACU11_18225 PF00137 ATP synthase subunit C ACU11_18230 PF00119 ATP synthase A chain ACU11_18250 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACU11_18250 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ACU11_18260 PF02817 e3 binding domain ACU11_18260 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ACU11_18260 PF00364 Biotin-requiring enzyme ACU11_18290 PF03180 NLPA lipoprotein ACU11_18295 PF00528 Binding-protein-dependent transport system inner membrane component ACU11_18300 PF09383 NIL domain ACU11_18300 PF00005 ABC transporter ACU11_18305 PF00892 EamA-like transporter family ACU11_18310 PF04461 Protein of unknown function (DUF520) ACU11_18340 PF13419 Haloacid dehalogenase-like hydrolase ACU11_18345 PF00849 RNA pseudouridylate synthase ACU11_18345 PF01479 S4 domain ACU11_18350 PF08468 Methyltransferase small domain N-terminal ACU11_18350 PF05175 Methyltransferase small domain ACU11_18365 PF07995 Glucose / Sorbosone dehydrogenase ACU11_18375 PF00989 PAS fold ACU11_18375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU11_18375 PF00512 His Kinase A (phospho-acceptor) domain ACU11_18395 PF00842 Alanine racemase, C-terminal domain ACU11_18395 PF01168 Alanine racemase, N-terminal domain ACU11_18400 PF01266 FAD dependent oxidoreductase ACU11_18405 PF01037 Lrp/AsnC ligand binding domain ACU11_18415 PF01641 SelR domain ACU11_18425 PF01618 MotA/TolQ/ExbB proton channel family ACU11_18430 PF13677 Membrane MotB of proton-channel complex MotA/MotB ACU11_18430 PF00691 OmpA family ACU11_18445 PF00072 Response regulator receiver domain ACU11_18445 PF00486 Transcriptional regulatory protein, C terminal ACU11_18450 PF08448 PAS fold ACU11_18450 PF00512 His Kinase A (phospho-acceptor) domain ACU11_18450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU11_18450 PF13188 PAS domain ACU11_18450 PF00072 Response regulator receiver domain ACU11_18460 PF00082 Subtilase family ACU11_18460 PF04151 Bacterial pre-peptidase C-terminal domain ACU11_18475 PF01061 ABC-2 type transporter ACU11_18480 PF00005 ABC transporter ACU11_18485 PF00999 Sodium/hydrogen exchanger family ACU11_18490 PF02469 Fasciclin domain ACU11_18495 PF03167 Uracil DNA glycosylase superfamily ACU11_18505 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ACU11_18520 PF00248 Aldo/keto reductase family ACU11_18535 PF05649 Peptidase family M13 ACU11_18535 PF01431 Peptidase family M13 ACU11_18550 PF01609 Transposase DDE domain ACU11_18550 PF05598 Transposase domain (DUF772) ACU11_18555 PF13520 Amino acid permease ACU11_18565 PF00072 Response regulator receiver domain ACU11_18565 PF04397 LytTr DNA-binding domain ACU11_18570 PF02743 Cache domain ACU11_18570 PF06580 Histidine kinase ACU11_18570 PF00672 HAMP domain ACU11_18570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU11_18585 PF01339 CheB methylesterase ACU11_18585 PF01739 CheR methyltransferase, SAM binding domain ACU11_18585 PF03705 CheR methyltransferase, all-alpha domain ACU11_18585 PF08448 PAS fold ACU11_18600 PF00158 Sigma-54 interaction domain ACU11_18600 PF00072 Response regulator receiver domain ACU11_18600 PF02954 Bacterial regulatory protein, Fis family ACU11_18610 PF01654 Cytochrome bd terminal oxidase subunit I ACU11_18615 PF02322 Cytochrome bd terminal oxidase subunit II ACU11_18630 PF00107 Zinc-binding dehydrogenase ACU11_18630 PF13823 Alcohol dehydrogenase GroES-associated ACU11_18630 PF08240 Alcohol dehydrogenase GroES-like domain ACU11_18670 PF07715 TonB-dependent Receptor Plug Domain ACU11_18670 PF00593 TonB dependent receptor ACU11_18685 PF00005 ABC transporter ACU11_18690 PF03377 TAL effector repeat ACU11_18700 PF05598 Transposase domain (DUF772) ACU11_18710 PF01527 Transposase ACU11_18725 PF08335 GlnD PII-uridylyltransferase ACU11_18725 PF03710 Glutamate-ammonia ligase adenylyltransferase ACU11_18730 PF02592 Putative vitamin uptake transporter ACU11_18760 PF00881 Nitroreductase family ACU11_18765 PF04264 YceI-like domain ACU11_18770 PF13276 HTH-like domain ACU11_18770 PF13683 Integrase core domain ACU11_18775 PF17831 Pyruvate dehydrogenase E1 component middle domain ACU11_18775 PF00456 Transketolase, thiamine diphosphate binding domain ACU11_18785 PF05598 Transposase domain (DUF772) ACU11_18790 PF05598 Transposase domain (DUF772) ACU11_18805 PF05598 Transposase domain (DUF772) ACU11_18810 PF05598 Transposase domain (DUF772) ACU11_18815 PF05598 Transposase domain (DUF772) ACU11_18825 PF05598 Transposase domain (DUF772) ACU11_18850 PF05598 Transposase domain (DUF772) ACU11_18900 PF13332 Hemagglutinin repeat ACU11_18900 PF04829 Pre-toxin domain with VENN motif ACU11_18900 PF13018 Extended Signal Peptide of Type V secretion system ACU11_18900 PF05860 haemagglutination activity domain ACU11_18905 PF08479 POTRA domain, ShlB-type ACU11_18905 PF17287 POTRA domain ACU11_18905 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ACU11_18925 PF01527 Transposase ACU11_18930 PF05593 RHS Repeat ACU11_18930 PF03527 RHS protein ACU11_18935 PF05598 Transposase domain (DUF772) ACU11_18935 PF01609 Transposase DDE domain ACU11_18945 PF13936 Helix-turn-helix domain ACU11_18945 PF00665 Integrase core domain ACU11_18955 PF13406 Transglycosylase SLT domain ACU11_18960 PF01527 Transposase ACU11_18965 PF13276 HTH-like domain ACU11_18970 PF05598 Transposase domain (DUF772) ACU11_18980 PF01609 Transposase DDE domain ACU11_18980 PF05598 Transposase domain (DUF772) ACU11_18995 PF12704 MacB-like periplasmic core domain ACU11_18995 PF02687 FtsX-like permease family ACU11_19035 PF02558 Ketopantoate reductase PanE/ApbA ACU11_19035 PF08546 Ketopantoate reductase PanE/ApbA C terminal ACU11_19045 PF01061 ABC-2 type transporter ACU11_19050 PF00005 ABC transporter ACU11_19055 PF00175 Oxidoreductase NAD-binding domain ACU11_19055 PF01383 CpcD/allophycocyanin linker domain ACU11_19060 PF01545 Cation efflux family ACU11_19065 PF02583 Metal-sensitive transcriptional repressor ACU11_19075 PF01381 Helix-turn-helix ACU11_19085 PF00005 ABC transporter ACU11_19120 PF02798 Glutathione S-transferase, N-terminal domain ACU11_19120 PF00043 Glutathione S-transferase, C-terminal domain ACU11_19125 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region ACU11_19125 PF00326 Prolyl oligopeptidase family ACU11_19155 PF03979 Sigma-70 factor, region 1.1 ACU11_19155 PF04545 Sigma-70, region 4 ACU11_19155 PF00140 Sigma-70 factor, region 1.2 ACU11_19155 PF04542 Sigma-70 region 2 ACU11_19155 PF04546 Sigma-70, non-essential region ACU11_19155 PF04539 Sigma-70 region 3 ACU11_19160 PF02580 D-Tyr-tRNA(Tyr) deacylase ACU11_19165 PF03279 Bacterial lipid A biosynthesis acyltransferase ACU11_19175 PF00925 GTP cyclohydrolase II ACU11_19195 PF00535 Glycosyl transferase family 2 ACU11_19210 PF01029 NusB family ACU11_19210 PF01189 16S rRNA methyltransferase RsmB/F ACU11_19215 PF00551 Formyl transferase ACU11_19215 PF02911 Formyl transferase, C-terminal domain ACU11_19220 PF01327 Polypeptide deformylase ACU11_19225 PF01476 LysM domain ACU11_19230 PF17782 DprA winged helix domain ACU11_19230 PF02481 DNA recombination-mediator protein A ACU11_19235 PF04361 Protein of unknown function (DUF494) ACU11_19240 PF07963 Prokaryotic N-terminal methylation motif ACU11_19240 PF00114 Pilin (bacterial filament) ACU11_19250 PF01751 Toprim domain ACU11_19250 PF13368 Topoisomerase C-terminal repeat ACU11_19250 PF01131 DNA topoisomerase ACU11_19255 PF01300 Telomere recombination ACU11_19280 PF01343 Peptidase family S49 ACU11_19285 PF01554 MatE ACU11_19305 PF17764 3′ DNA-binding domain (3′BD) ACU11_19305 PF00271 Helicase conserved C-terminal domain ACU11_19305 PF00270 DEAD/DEAH box helicase ACU11_19305 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ACU11_19305 PF18074 Primosomal protein N C-terminal domain ACU11_19310 PF03091 CutA1 divalent ion tolerance protein ACU11_19315 PF11412 Disulphide bond corrector protein DsbC ACU11_19315 PF02683 Cytochrome C biogenesis protein transmembrane region ACU11_19325 PF01220 Dehydroquinase class II ACU11_19330 PF00364 Biotin-requiring enzyme ACU11_19340 PF02785 Biotin carboxylase C-terminal domain ACU11_19340 PF00289 Biotin carboxylase, N-terminal domain ACU11_19340 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ACU11_19365 PF01381 Helix-turn-helix ACU11_19380 PF02954 Bacterial regulatory protein, Fis family ACU11_19385 PF00818 Ice nucleation protein repeat ACU11_19395 PF02142 MGS-like domain ACU11_19395 PF01808 AICARFT/IMPCHase bienzyme ACU11_19400 PF02844 Phosphoribosylglycinamide synthetase, N domain ACU11_19400 PF02843 Phosphoribosylglycinamide synthetase, C domain ACU11_19400 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ACU11_19405 PF02687 FtsX-like permease family ACU11_19405 PF00005 ABC transporter ACU11_19405 PF12704 MacB-like periplasmic core domain ACU11_19415 PF12805 FUSC-like inner membrane protein yccS ACU11_19430 PF07690 Major Facilitator Superfamily ACU11_19445 PF17113 Regulatory signalling modulator protein AmpE ACU11_19445 PF03186 CobD/Cbib protein ACU11_19450 PF09297 NADH pyrophosphatase zinc ribbon domain ACU11_19450 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain ACU11_19450 PF00293 NUDIX domain ACU11_19460 PF01521 Iron-sulphur cluster biosynthesis ACU11_19480 PF03707 Bacterial signalling protein N terminal repeat ACU11_19480 PF00990 Diguanylate cyclase, GGDEF domain ACU11_19480 PF00563 EAL domain ACU11_19485 PF00072 Response regulator receiver domain ACU11_19485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU11_19485 PF00512 His Kinase A (phospho-acceptor) domain ACU11_19485 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ACU11_19485 PF00672 HAMP domain ACU11_19485 PF01627 Hpt domain ACU11_19490 PF00210 Ferritin-like domain ACU11_19500 PF00293 NUDIX domain ACU11_19515 PF00380 Ribosomal protein S9/S16 ACU11_19520 PF00572 Ribosomal protein L13 ACU11_19525 PF03232 Ubiquinone biosynthesis protein COQ7 ACU11_19530 PF00893 Small Multidrug Resistance protein ACU11_19535 PF02675 S-adenosylmethionine decarboxylase ACU11_19540 PF00027 Cyclic nucleotide-binding domain ACU11_19540 PF00325 Bacterial regulatory proteins, crp family ACU11_19550 PF00218 Indole-3-glycerol phosphate synthase ACU11_19555 PF02885 Glycosyl transferase family, helical bundle domain ACU11_19555 PF00591 Glycosyl transferase family, a/b domain ACU11_19570 PF00117 Glutamine amidotransferase class-I ACU11_19585 PF00425 chorismate binding enzyme ACU11_19585 PF04715 Anthranilate synthase component I, N terminal region ACU11_19590 PF00781 Diacylglycerol kinase catalytic domain ACU11_19595 PF00583 Acetyltransferase (GNAT) family ACU11_19600 PF00834 Ribulose-phosphate 3 epimerase family ACU11_19605 PF00226 DnaJ domain ACU11_19605 PF05099 Tellurite resistance protein TerB ACU11_19610 PF01259 SAICAR synthetase ACU11_19620 PF00156 Phosphoribosyl transferase domain ACU11_19630 PF13614 AAA domain ACU11_19635 PF17762 HTH domain found in ParB protein ACU11_19635 PF02195 ParB-like nuclease domain ACU11_19645 PF01370 NAD dependent epimerase/dehydratase family ACU11_19650 PF00535 Glycosyl transferase family 2 ACU11_19665 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ACU11_19665 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ACU11_19665 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ACU11_19665 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ACU11_19670 PF00692 dUTPase ACU11_19675 PF04127 DNA / pantothenate metabolism flavoprotein ACU11_19675 PF02441 Flavoprotein ACU11_19680 PF04002 RadC-like JAB domain ACU11_19685 PF05746 DALR anticodon binding domain ACU11_19685 PF00750 tRNA synthetases class I (R) ACU11_19685 PF03485 Arginyl tRNA synthetase N terminal domain ACU11_19700 PF00106 short chain dehydrogenase ACU11_19705 PF01757 Acyltransferase family ACU11_19715 PF01609 Transposase DDE domain ACU11_19715 PF05598 Transposase domain (DUF772) ACU11_19720 PF17944 Arginine decarboxylase C-terminal helical extension ACU11_19720 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ACU11_19720 PF17810 Arginine decarboxylase helical bundle domain ACU11_19725 PF17284 Spermidine synthase tetramerisation domain ACU11_19750 PF01527 Transposase ACU11_19755 PF03377 TAL effector repeat ACU11_19760 PF03377 TAL effector repeat ACU11_19780 PF05598 Transposase domain (DUF772) ACU11_19800 PF00543 Nitrogen regulatory protein P-II ACU11_19805 PF04380 Membrane fusogenic activity ACU11_19810 PF13335 Magnesium chelatase, subunit ChlI C-terminal ACU11_19810 PF01078 Magnesium chelatase, subunit ChlI ACU11_19820 PF12792 CSS motif domain associated with EAL ACU11_19820 PF00563 EAL domain ACU11_19825 PF00487 Fatty acid desaturase ACU11_19830 PF00111 2Fe-2S iron-sulfur cluster binding domain ACU11_19830 PF00175 Oxidoreductase NAD-binding domain ACU11_19830 PF00970 Oxidoreductase FAD-binding domain ACU11_19835 PF00440 Bacterial regulatory proteins, tetR family ACU11_19865 PF08338 Domain of unknown function (DUF1731) ACU11_19865 PF01370 NAD dependent epimerase/dehydratase family ACU11_19870 PF00512 His Kinase A (phospho-acceptor) domain ACU11_19870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU11_19870 PF08521 Two-component sensor kinase N-terminal ACU11_19880 PF00595 PDZ domain ACU11_19900 PF01594 AI-2E family transporter ACU11_19910 PF00883 Cytosol aminopeptidase family, catalytic domain ACU11_19910 PF02789 Cytosol aminopeptidase family, N-terminal domain ACU11_19920 PF04542 Sigma-70 region 2 ACU11_19920 PF08281 Sigma-70, region 4 ACU11_19925 PF00199 Catalase ACU11_19945 PF00892 EamA-like transporter family ACU11_19965 PF00753 Metallo-beta-lactamase superfamily ACU11_19970 PF00579 tRNA synthetases class I (W and Y) ACU11_19975 PF05532 CsbD-like ACU11_19990 PF00491 Arginase family ACU11_20010 PF02223 Thymidylate kinase ACU11_20015 PF05598 Transposase domain (DUF772) ACU11_20015 PF01609 Transposase DDE domain ACU11_20030 PF03309 Type III pantothenate kinase ACU11_20035 PF08279 HTH domain ACU11_20035 PF03099 Biotin/lipoate A/B protein ligase family ACU11_20035 PF02237 Biotin protein ligase C terminal domain ACU11_20045 PF06167 Glucose-regulated metallo-peptidase M90 ACU11_20060 PF00512 His Kinase A (phospho-acceptor) domain ACU11_20060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU11_20060 PF00672 HAMP domain ACU11_20065 PF00072 Response regulator receiver domain ACU11_20065 PF00486 Transcriptional regulatory protein, C terminal ACU11_20075 PF01207 Dihydrouridine synthase (Dus) ACU11_20090 PF06628 Catalase-related immune-responsive ACU11_20090 PF00199 Catalase ACU11_20110 PF13307 Helicase C-terminal domain ACU11_20110 PF06733 DEAD_2 ACU11_20125 PF01488 Shikimate / quinate 5-dehydrogenase ACU11_20125 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ACU11_20125 PF08501 Shikimate dehydrogenase substrate binding domain ACU11_20135 PF00667 FAD binding domain ACU11_20135 PF00258 Flavodoxin ACU11_20135 PF00175 Oxidoreductase NAD-binding domain ACU11_20155 PF00490 Delta-aminolevulinic acid dehydratase ACU11_20180 PF05368 NmrA-like family ACU11_20185 PF01638 HxlR-like helix-turn-helix ACU11_20195 PF08267 Cobalamin-independent synthase, N-terminal domain ACU11_20195 PF01717 Cobalamin-independent synthase, Catalytic domain ACU11_20205 PF03358 NADPH-dependent FMN reductase ACU11_20210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACU11_20210 PF03466 LysR substrate binding domain ACU11_20215 PF02677 Epoxyqueuosine reductase QueH ACU11_20225 PF00672 HAMP domain ACU11_20225 PF00512 His Kinase A (phospho-acceptor) domain ACU11_20225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU11_20230 PF00672 HAMP domain ACU11_20230 PF00512 His Kinase A (phospho-acceptor) domain ACU11_20230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACU11_20235 PF00072 Response regulator receiver domain ACU11_20235 PF00486 Transcriptional regulatory protein, C terminal ACU11_20240 PF00551 Formyl transferase ACU11_20250 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ACU11_20250 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ACU11_20260 PF02146 Sir2 family ACU11_20270 PF07690 Major Facilitator Superfamily ACU11_20275 PF03466 LysR substrate binding domain ACU11_20275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACU11_20285 PF01026 TatD related DNase ACU11_20305 PF13936 Helix-turn-helix domain ACU11_20305 PF00665 Integrase core domain ACU11_20325 PF03377 TAL effector repeat ACU11_20330 PF01527 Transposase ACU11_20360 PF03377 TAL effector repeat ACU11_20375 PF13333 Integrase core domain ACU11_20375 PF13276 HTH-like domain ACU11_20375 PF00665 Integrase core domain ACU11_20380 PF03377 TAL effector repeat ACU11_20390 PF13333 Integrase core domain ACU11_20390 PF00665 Integrase core domain ACU11_20390 PF13276 HTH-like domain ACU11_20405 PF05598 Transposase domain (DUF772) ACU11_20415 PF05598 Transposase domain (DUF772) ACU11_20415 PF01609 Transposase DDE domain ACU11_20420 PF00665 Integrase core domain ACU11_20420 PF13936 Helix-turn-helix domain ACU11_20430 PF13460 NAD(P)H-binding ACU11_20435 PF00128 Alpha amylase, catalytic domain ACU11_20435 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ACU11_20445 PF00128 Alpha amylase, catalytic domain ACU11_20450 PF02446 4-alpha-glucanotransferase ACU11_20455 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ACU11_20455 PF00128 Alpha amylase, catalytic domain ACU11_20455 PF11941 Domain of unknown function (DUF3459) ACU11_20460 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ACU11_20460 PF02806 Alpha amylase, C-terminal all-beta domain ACU11_20460 PF00128 Alpha amylase, catalytic domain ACU11_20465 PF00534 Glycosyl transferases group 1 ACU11_20465 PF08323 Starch synthase catalytic domain ACU11_20470 PF00072 Response regulator receiver domain ACU11_20470 PF00990 Diguanylate cyclase, GGDEF domain ACU11_20480 PF05661 Protein of unknown function (DUF808) ACU11_20485 PF03109 ABC1 family ACU11_20500 PF00924 Mechanosensitive ion channel ACU11_20500 PF12795 Mechanosensitive ion channel porin domain ACU11_20500 PF12794 Mechanosensitive ion channel inner membrane domain 1 ACU11_20515 PF01464 Transglycosylase SLT domain ACU11_20530 PF01311 Bacterial export proteins, family 1 ACU11_20540 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ACU11_20540 PF02874 ATP synthase alpha/beta family, beta-barrel domain ACU11_20540 PF18269 T3SS EscN ATPase C-terminal domain ACU11_20555 PF01514 Secretory protein of YscJ/FliF family ACU11_20570 PF01312 FlhB HrpN YscU SpaS Family ACU11_20575 PF00771 FHIPEP family ACU11_20590 PF00813 FliP family ACU11_20595 PF01313 Bacterial export proteins, family 3 ACU11_20645 PF05819 NolX protein ACU11_20650 PF05598 Transposase domain (DUF772) ACU11_20665 PF05598 Transposase domain (DUF772) ACU11_20675 PF08125 Mannitol dehydrogenase C-terminal domain ACU11_20675 PF01232 Mannitol dehydrogenase Rossmann domain ACU11_20680 PF01915 Glycosyl hydrolase family 3 C-terminal domain ACU11_20680 PF00933 Glycosyl hydrolase family 3 N terminal domain ACU11_20680 PF14310 Fibronectin type III-like domain ACU11_20680 PF07691 PA14 domain ACU11_20685 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain ACU11_20685 PF04616 Glycosyl hydrolases family 43 ACU11_20690 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ACU11_20690 PF13378 Enolase C-terminal domain-like ACU11_20700 PF03648 Glycosyl hydrolase family 67 N-terminus ACU11_20700 PF07488 Glycosyl hydrolase family 67 middle domain ACU11_20700 PF07477 Glycosyl hydrolase family 67 C-terminus ACU11_20705 PF00356 Bacterial regulatory proteins, lacI family ACU11_20715 PF01171 PP-loop family ACU11_20720 PF04381 Putative exonuclease, RdgC ACU11_20735 PF12697 Alpha/beta hydrolase family ACU11_20740 PF00762 Ferrochelatase ACU11_20750 PF02416 mttA/Hcf106 family ACU11_20755 PF02416 mttA/Hcf106 family ACU11_20760 PF00902 Sec-independent protein translocase protein (TatC) ACU11_20770 PF00958 GMP synthase C terminal domain ACU11_20770 PF00117 Glutamine amidotransferase class-I ACU11_20780 PF00437 Type II/IV secretion system protein ACU11_20780 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ACU11_20785 PF02091 Glycyl-tRNA synthetase alpha subunit ACU11_20790 PF05746 DALR anticodon binding domain ACU11_20790 PF02092 Glycyl-tRNA synthetase beta subunit ACU11_20795 PF13181 Tetratricopeptide repeat ACU11_20800 PF05598 Transposase domain (DUF772) ACU11_20810 PF07715 TonB-dependent Receptor Plug Domain ACU11_20810 PF00593 TonB dependent receptor ACU11_20815 PF01103 Surface antigen ACU11_20815 PF17243 POTRA domain TamA domain 1 ACU11_20820 PF04357 TamB, inner membrane protein subunit of TAM complex ACU11_20830 PF05598 Transposase domain (DUF772) ACU11_20835 PF05598 Transposase domain (DUF772) ACU11_20850 PF01040 UbiA prenyltransferase family ACU11_20855 PF00156 Phosphoribosyl transferase domain ACU11_20860 PF04055 Radical SAM superfamily ACU11_20860 PF06968 Biotin and Thiamin Synthesis associated domain ACU11_20865 PF00155 Aminotransferase class I and II ACU11_20875 PF12697 Alpha/beta hydrolase family ACU11_20885 PF13649 Methyltransferase domain ACU11_20905 PF00291 Pyridoxal-phosphate dependent enzyme ACU11_20905 PF13291 ACT domain ACU11_20915 PF13932 GidA associated domain ACU11_20915 PF01134 Glucose inhibited division protein A ACU11_20935 PF05598 Transposase domain (DUF772) ACU11_20945 PF01527 Transposase ACU11_20950 PF03377 TAL effector repeat ACU11_20965 PF05598 Transposase domain (DUF772) ACU11_20980 PF07859 alpha/beta hydrolase fold ACU11_20990 PF01614 Bacterial transcriptional regulator ACU11_20990 PF09339 IclR helix-turn-helix domain ACU11_21000 PF02627 Carboxymuconolactone decarboxylase family ACU11_21005 PF12146 Serine aminopeptidase, S33 ACU11_21010 PF10397 Adenylosuccinate lyase C-terminus ACU11_21010 PF00206 Lyase ACU11_21020 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal ACU11_21020 PF00775 Dioxygenase ACU11_21025 PF00108 Thiolase, N-terminal domain ACU11_21025 PF02803 Thiolase, C-terminal domain ACU11_21030 PF01144 Coenzyme A transferase ACU11_21035 PF01144 Coenzyme A transferase ACU11_21040 PF00355 Rieske [2Fe-2S] domain ACU11_21065 PF01494 FAD binding domain ACU11_21075 PF00171 Aldehyde dehydrogenase family ACU11_21095 PF01966 HD domain ACU11_21095 PF11871 Domain of unknown function (DUF3391) ACU11_21100 PF07690 Major Facilitator Superfamily ACU11_21105 PF00132 Bacterial transferase hexapeptide (six repeats) ACU11_21110 PF03692 Putative zinc- or iron-chelating domain ACU11_21115 PF00920 Dehydratase family ACU11_21120 PF00665 Integrase core domain ACU11_21120 PF13936 Helix-turn-helix domain ACU11_21145 PF04616 Glycosyl hydrolases family 43 ACU11_21170 PF00553 Cellulose binding domain ACU11_21170 PF03422 Carbohydrate binding module (family 6) ACU11_21170 PF00331 Glycosyl hydrolase family 10 ACU11_21175 PF00553 Cellulose binding domain ACU11_21175 PF03422 Carbohydrate binding module (family 6) ACU11_21175 PF00331 Glycosyl hydrolase family 10 ACU11_21180 PF02614 Glucuronate isomerase ACU11_21205 PF00326 Prolyl oligopeptidase family ACU11_21210 PF02785 Biotin carboxylase C-terminal domain ACU11_21210 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ACU11_21210 PF00364 Biotin-requiring enzyme ACU11_21210 PF00289 Biotin carboxylase, N-terminal domain ACU11_21215 PF01039 Carboxyl transferase domain ACU11_21220 PF02770 Acyl-CoA dehydrogenase, middle domain ACU11_21220 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACU11_21220 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACU11_21265 PF02492 CobW/HypB/UreG, nucleotide-binding domain ACU11_21265 PF07683 Cobalamin synthesis protein cobW C-terminal domain ACU11_21290 PF03969 AFG1-like ATPase ACU11_21295 PF01047 MarR family ACU11_21300 PF02566 OsmC-like protein ACU11_21320 PF13340 Putative transposase of IS4/5 family (DUF4096) ACU11_21335 PF00248 Aldo/keto reductase family ACU11_21340 PF16884 N-terminal domain of oxidoreductase ACU11_21340 PF00107 Zinc-binding dehydrogenase ACU11_21345 PF00248 Aldo/keto reductase family ACU11_21355 PF00849 RNA pseudouridylate synthase ACU11_21365 PF00270 DEAD/DEAH box helicase ACU11_21365 PF08482 ATP-dependent helicase C-terminal ACU11_21365 PF00271 Helicase conserved C-terminal domain ACU11_21365 PF04408 Helicase associated domain (HA2) ACU11_21375 PF07308 Protein of unknown function (DUF1456) ACU11_21380 PF00576 HIUase/Transthyretin family ACU11_21405 PF00266 Aminotransferase class-V ACU11_21435 PF00109 Beta-ketoacyl synthase, N-terminal domain ACU11_21435 PF14765 Polyketide synthase dehydratase ACU11_21435 PF00550 Phosphopantetheine attachment site ACU11_21435 PF08659 KR domain ACU11_21435 PF00698 Acyl transferase domain ACU11_21435 PF08240 Alcohol dehydrogenase GroES-like domain ACU11_21435 PF16197 Ketoacyl-synthetase C-terminal extension ACU11_21435 PF02801 Beta-ketoacyl synthase, C-terminal domain ACU11_21440 PF01553 Acyltransferase ACU11_21450 PF00356 Bacterial regulatory proteins, lacI family ACU11_21465 PF04820 Tryptophan halogenase ACU11_21470 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ACU11_21475 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) ACU11_21490 PF00580 UvrD/REP helicase N-terminal domain ACU11_21490 PF13361 UvrD-like helicase C-terminal domain ACU11_21495 PF00265 Thymidine kinase ACU11_21505 PF04349 Periplasmic glucan biosynthesis protein, MdoG ACU11_21525 PF01609 Transposase DDE domain ACU11_21525 PF05598 Transposase domain (DUF772) ACU11_21540 PF00849 RNA pseudouridylate synthase ACU11_21565 PF00990 Diguanylate cyclase, GGDEF domain ACU11_21575 PF02595 Glycerate kinase family ACU11_21580 PF07690 Major Facilitator Superfamily ACU11_21595 PF17785 PUA-like domain ACU11_21595 PF10672 S-adenosylmethionine-dependent methyltransferase ACU11_21600 PF03741 Integral membrane protein TerC family ACU11_21605 PF01694 Rhomboid family ACU11_21610 PF03009 Glycerophosphoryl diester phosphodiesterase family ACU11_21620 PF01569 PAP2 superfamily ACU11_21625 PF10396 GTP-binding protein TrmE N-terminus ACU11_21625 PF12631 MnmE helical domain ACU11_21625 PF01926 50S ribosome-binding GTPase ACU11_21630 PF01522 Polysaccharide deacetylase ACU11_21635 PF02096 60Kd inner membrane protein ACU11_21635 PF14849 YidC periplasmic domain ACU11_21640 PF00825 Ribonuclease P ACU11_21645 PF00468 Ribosomal protein L34 ACU11_21690 PF08751 TrwC relaxase ACU11_21690 PF18272 single-stranded DNA binding TraI N-terminal subdomain ACU11_21690 PF07057 DNA helicase TraI ACU11_21690 PF18340 DNA relaxase TraI 2B/2B-like domain ACU11_21690 PF08751 TrwC relaxase ACU11_21690 PF18340 DNA relaxase TraI 2B/2B-like domain ACU11_21690 PF18272 single-stranded DNA binding TraI N-terminal subdomain ACU11_21690 PF07057 DNA helicase TraI ACU11_21710 PF01464 Transglycosylase SLT domain ACU11_21715 PF00437 Type II/IV secretion system protein ACU11_21720 PF03743 Bacterial conjugation TrbI-like protein ACU11_21725 PF03524 Conjugal transfer protein ACU11_21780 PF00239 Resolvase, N terminal domain ACU11_21780 PF02796 Helix-turn-helix domain of resolvase ACU11_21835 PF10609 NUBPL iron-transfer P-loop NTPase ACU11_21835 PF01883 Iron-sulfur cluster assembly protein