ACU11_00005 SM00382 ATPases associated with a variety of cellular activities ACU11_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain ACU11_00010 SM00480 DNA polymerase III beta subunit ACU11_00020 SM00387 Histidine kinase-like ATPases ACU11_00020 SM00433 TopoisomeraseII ACU11_00035 SM00028 Tetratricopeptide repeats ACU11_00070 SM00155 Phospholipase D. Active site motifs. ACU11_00175 SM00382 ATPases associated with a variety of cellular activities ACU11_00210 SM01126 ACU11_00210 ACU11_00215 SM00829 Enoylreductase ACU11_00255 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ACU11_00255 SM00245 tail specific protease ACU11_00285 SM00729 Elongator protein 3, MiaB family, Radical SAM ACU11_00305 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain ACU11_00305 SM01232 ACU11_00305 ACU11_00355 SM00822 ACU11_00355 ACU11_00445 SM00530 Helix-turn-helix XRE-family like proteins ACU11_00470 SM00869 Autotransporter beta-domain ACU11_00490 SM00382 ATPases associated with a variety of cellular activities ACU11_00635 SM00487 DEAD-like helicases superfamily ACU11_00635 SM00490 helicase superfamily c-terminal domain ACU11_00655 SM01126 ACU11_00655 ACU11_00870 SM00347 helix_turn_helix multiple antibiotic resistance protein ACU11_00940 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACU11_00940 SM00091 PAS domain ACU11_01035 SM00642 Alpha-amylase domain ACU11_01040 SM00642 Alpha-amylase domain ACU11_01045 SM00642 Alpha-amylase domain ACU11_01060 SM00354 helix_turn _helix lactose operon repressor ACU11_01085 SM00344 helix_turn_helix ASNC type ACU11_01110 SM00382 ATPases associated with a variety of cellular activities ACU11_01125 SM00382 ATPases associated with a variety of cellular activities ACU11_01155 SM00530 Helix-turn-helix XRE-family like proteins ACU11_01180 SM00855 Phosphoglycerate mutase family ACU11_01185 SM00867 YceI-like domain ACU11_01190 SM00155 Phospholipase D. Active site motifs. ACU11_01200 SM00563 Phosphate acyltransferases ACU11_01215 SM00028 Tetratricopeptide repeats ACU11_01240 SM01230 ACU11_01240 ACU11_01245 SM00938 Nitrogen regulatory protein P-II ACU11_01255 SM00387 Histidine kinase-like ATPases ACU11_01255 SM00388 His Kinase A (phosphoacceptor) domain ACU11_01260 SM00382 ATPases associated with a variety of cellular activities ACU11_01260 SM00448 cheY-homologous receiver domain ACU11_01280 SM01126 ACU11_01280 ACU11_01350 SM00450 Rhodanese Homology Domain ACU11_01375 SM00387 Histidine kinase-like ATPases ACU11_01375 SM00388 His Kinase A (phosphoacceptor) domain ACU11_01380 SM00382 ATPases associated with a variety of cellular activities ACU11_01380 SM00448 cheY-homologous receiver domain ACU11_01500 SM00563 Phosphate acyltransferases ACU11_01520 SM01321 ACU11_01520 ACU11_01530 SM00564 beta-propeller repeat ACU11_01560 SM00091 PAS domain ACU11_01560 SM00387 Histidine kinase-like ATPases ACU11_01560 SM00388 His Kinase A (phosphoacceptor) domain ACU11_01560 SM00448 cheY-homologous receiver domain ACU11_01570 SM00346 helix_turn_helix isocitrate lyase regulation ACU11_01590 SM00421 helix_turn_helix, Lux Regulon ACU11_01590 SM00448 cheY-homologous receiver domain ACU11_01695 SM00155 Phospholipase D. Active site motifs. ACU11_01735 SM00342 helix_turn_helix, arabinose operon control protein ACU11_01765 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs ACU11_01765 SM00474 3'-5' exonuclease ACU11_01765 SM00475 5'-3' exonuclease ACU11_01765 SM00482 DNA polymerase A domain ACU11_01770 SM01126 ACU11_01770 ACU11_01780 SM00822 ACU11_01780 ACU11_01830 SM00563 Phosphate acyltransferases ACU11_01885 SM01126 ACU11_01885 ACU11_01905 SM00825 Beta-ketoacyl synthase ACU11_01915 SM00248 ankyrin repeats ACU11_01920 SM00226 Low molecular weight phosphatase family ACU11_01960 SM00116 Domain in cystathionine beta-synthase and other proteins. ACU11_01960 SM00924 MgtE intracellular N domain ACU11_01970 SM00881 CoA binding domain ACU11_02065 SM00487 DEAD-like helicases superfamily ACU11_02065 SM00490 helicase superfamily c-terminal domain ACU11_02095 SM00326 Src homology 3 domains ACU11_02100 SM00861 Transketolase, pyrimidine binding domain ACU11_02130 SM00347 helix_turn_helix multiple antibiotic resistance protein ACU11_02370 SM00400 zinc finger ACU11_02370 SM00493 ACU11_02370 ACU11_02370 SM00766 DNA primase DnaG DnaB-binding ACU11_02395 SM00905 Dihydroneopterin aldolase ACU11_02400 SM01217 ACU11_02400 ACU11_02440 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain ACU11_02450 SM00644 ACU11_02450 ACU11_02495 SM01150 ACU11_02495 ACU11_02500 SM01126 ACU11_02500 ACU11_02575 SM00357 Cold shock protein domain ACU11_02575 SM00382 ATPases associated with a variety of cellular activities ACU11_02575 SM00959 Rho termination factor, N-terminal domain ACU11_02585 SM00487 DEAD-like helicases superfamily ACU11_02585 SM00490 helicase superfamily c-terminal domain ACU11_02590 SM00382 ATPases associated with a variety of cellular activities ACU11_02600 SM00448 cheY-homologous receiver domain ACU11_02605 SM00986 Uracil DNA glycosylase superfamily ACU11_02605 SM00987 UreE urease accessory protein, C-terminal domain ACU11_02645 SM00883 Chaperonin 10 Kd subunit ACU11_02760 SM01126 ACU11_02760 ACU11_02835 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACU11_02845 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACU11_02845 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ACU11_02845 SM00091 PAS domain ACU11_02845 SM00267 diguanylate cyclase ACU11_02890 SM00448 cheY-homologous receiver domain ACU11_02890 SM00850 LytTr DNA-binding domain ACU11_02970 SM00382 ATPases associated with a variety of cellular activities ACU11_02970 SM01086 C-terminal, D2-small domain, of ClpB protein ACU11_03000 SM00267 diguanylate cyclase ACU11_03005 SM01263 ACU11_03005 ACU11_03025 SM00268 Actin ACU11_03085 SM00936 Penicillin-binding protein 5, C-terminal domain ACU11_03105 SM00729 Elongator protein 3, MiaB family, Radical SAM ACU11_03110 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ACU11_03110 SM00245 tail specific protease ACU11_03160 SM01350 ACU11_03160 ACU11_03175 SM00749 bacterial OsmY and nodulation domain ACU11_03180 SM00387 Histidine kinase-like ATPases ACU11_03180 SM00388 His Kinase A (phosphoacceptor) domain ACU11_03185 SM00448 cheY-homologous receiver domain ACU11_03190 SM00387 Histidine kinase-like ATPases ACU11_03190 SM00388 His Kinase A (phosphoacceptor) domain ACU11_03190 SM00448 cheY-homologous receiver domain ACU11_03240 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACU11_03240 SM00866 ACU11_03240 ACU11_03250 SM00354 helix_turn _helix lactose operon repressor ACU11_03380 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACU11_03380 SM00387 Histidine kinase-like ATPases ACU11_03380 SM00388 His Kinase A (phosphoacceptor) domain ACU11_03385 SM00448 cheY-homologous receiver domain ACU11_03385 SM00862 Transcriptional regulatory protein, C terminal ACU11_03400 SM00829 Enoylreductase ACU11_03430 SM00382 ATPases associated with a variety of cellular activities ACU11_03515 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain ACU11_03545 SM00387 Histidine kinase-like ATPases ACU11_03545 SM00388 His Kinase A (phosphoacceptor) domain ACU11_03550 SM00448 cheY-homologous receiver domain ACU11_03550 SM00862 Transcriptional regulatory protein, C terminal ACU11_03655 SM00842 Cell division protein FtsA ACU11_03660 SM00864 Tubulin/FtsZ family, GTPase domain ACU11_03660 SM00865 Tubulin/FtsZ family, C-terminal domain ACU11_03680 SM00957 SecA DEAD-like domain ACU11_03680 SM00958 SecA preprotein cross-linking domain ACU11_03710 SM00829 Enoylreductase ACU11_03715 SM00944 Pro-kumamolisin, activation domain ACU11_03760 SM00996 S-adenosyl-L-homocysteine hydrolase ACU11_03760 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ACU11_03895 SM00382 ATPases associated with a variety of cellular activities ACU11_03905 SM00448 cheY-homologous receiver domain ACU11_03905 SM00862 Transcriptional regulatory protein, C terminal ACU11_03910 SM00387 Histidine kinase-like ATPases ACU11_03910 SM00388 His Kinase A (phosphoacceptor) domain ACU11_03970 SM00650 Ribosomal RNA adenine dimethylases ACU11_04065 SM00347 helix_turn_helix multiple antibiotic resistance protein ACU11_04130 SM00448 cheY-homologous receiver domain ACU11_04135 SM00421 helix_turn_helix, Lux Regulon ACU11_04205 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs ACU11_04205 SM00475 5'-3' exonuclease ACU11_04220 SM01002 Alanine dehydrogenase/PNT, C-terminal domain ACU11_04220 SM01003 Alanine dehydrogenase/PNT, N-terminal domain ACU11_04320 SM00852 Probable molybdopterin binding domain ACU11_04325 SM00028 Tetratricopeptide repeats ACU11_04330 SM00937 ACU11_04330 ACU11_04340 SM00028 Tetratricopeptide repeats ACU11_04360 SM01400 ACU11_04360 ACU11_04410 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. ACU11_04410 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. ACU11_04415 SM00649 Ribosomal protein L11/L12 ACU11_04440 SM00663 RNA polymerase I subunit A N-terminus ACU11_04455 SM00838 Elongation factor G C-terminus ACU11_04455 SM00889 Elongation factor G, domain IV ACU11_04470 SM01403 ACU11_04470 ACU11_04490 SM01382 ACU11_04490 ACU11_04490 SM01383 ACU11_04490 ACU11_04505 SM00322 K homology RNA-binding domain ACU11_04525 SM01374 ACU11_04525 ACU11_04530 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. ACU11_04590 SM00363 S4 RNA-binding domain ACU11_04590 SM01390 ACU11_04590 ACU11_04595 SM00662 RNA polymerases D ACU11_04610 SM01126 ACU11_04610 ACU11_04640 SM00838 Elongation factor G C-terminus ACU11_04710 SM00829 Enoylreductase ACU11_04755 SM00382 ATPases associated with a variety of cellular activities ACU11_04765 SM00829 Enoylreductase ACU11_04790 SM00855 Phosphoglycerate mutase family ACU11_04840 SM00014 Acid phosphatase homologues ACU11_04860 SM00387 Histidine kinase-like ATPases ACU11_04860 SM00388 His Kinase A (phosphoacceptor) domain ACU11_04865 SM00448 cheY-homologous receiver domain ACU11_04865 SM00862 Transcriptional regulatory protein, C terminal ACU11_04885 SM01329 ACU11_04885 ACU11_04945 SM00382 ATPases associated with a variety of cellular activities ACU11_04945 SM00994 ClpX C4-type zinc finger ACU11_04945 SM01086 C-terminal, D2-small domain, of ClpB protein ACU11_04950 SM00382 ATPases associated with a variety of cellular activities ACU11_04950 SM00464 Found in ATP-dependent protease La (LON) ACU11_04955 SM00411 bacterial (prokaryotic) histone like domain ACU11_04980 SM00257 Lysin motif ACU11_04985 SM00849 Metallo-beta-lactamase superfamily ACU11_05000 SM00479 ACU11_05000 ACU11_05005 SM00331 Sigma factor PP2C-like phosphatases ACU11_05005 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain ACU11_05100 SM00507 HNH nucleases ACU11_05265 SM00849 Metallo-beta-lactamase superfamily ACU11_05270 SM00729 Elongator protein 3, MiaB family, Radical SAM ACU11_05300 SM00382 ATPases associated with a variety of cellular activities ACU11_05310 SM00493 ACU11_05310 ACU11_05325 SM00460 Transglutaminase/protease-like homologues ACU11_05335 SM00382 ATPases associated with a variety of cellular activities ACU11_05375 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. ACU11_05380 SM00822 ACU11_05380 ACU11_05390 SM00825 Beta-ketoacyl synthase ACU11_05430 SM00382 ATPases associated with a variety of cellular activities ACU11_05500 SM00271 DnaJ molecular chaperone homology domain ACU11_05505 SM00448 cheY-homologous receiver domain ACU11_05510 SM00244 prohibitin homologues ACU11_05515 SM00244 prohibitin homologues ACU11_05525 SM00788 Adenylosuccinate synthetase ACU11_05575 SM00487 DEAD-like helicases superfamily ACU11_05575 SM00490 helicase superfamily c-terminal domain ACU11_05590 SM00487 DEAD-like helicases superfamily ACU11_05620 SM00220 Serine/Threonine protein kinases, catalytic domain ACU11_05645 SM00855 Phosphoglycerate mutase family ACU11_05665 SM00966 SpoVT / AbrB like domain ACU11_05685 SM00481 DNA polymerase alpha chain like domain ACU11_05690 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ACU11_05725 SM00091 PAS domain ACU11_05725 SM00342 helix_turn_helix, arabinose operon control protein ACU11_05745 SM01060 ACU11_05745 ACU11_05760 SM00990 ACU11_05760 ACU11_05785 SM00382 ATPases associated with a variety of cellular activities ACU11_05825 SM00448 cheY-homologous receiver domain ACU11_05825 SM00862 Transcriptional regulatory protein, C terminal ACU11_05830 SM00387 Histidine kinase-like ATPases ACU11_05830 SM00388 His Kinase A (phosphoacceptor) domain ACU11_05865 SM00421 helix_turn_helix, Lux Regulon ACU11_05865 SM00448 cheY-homologous receiver domain ACU11_05880 SM00478 endonuclease III ACU11_06190 SM00382 ATPases associated with a variety of cellular activities ACU11_06190 SM01086 C-terminal, D2-small domain, of ClpB protein ACU11_06400 SM00422 helix_turn_helix, mercury resistance ACU11_06425 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. ACU11_06435 SM00849 Metallo-beta-lactamase superfamily ACU11_06460 SM00421 helix_turn_helix, Lux Regulon ACU11_06490 SM00924 MgtE intracellular N domain ACU11_06535 SM00382 ATPases associated with a variety of cellular activities ACU11_06555 SM00116 Domain in cystathionine beta-synthase and other proteins. ACU11_06695 SM00382 ATPases associated with a variety of cellular activities ACU11_06710 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain ACU11_06745 SM00411 bacterial (prokaryotic) histone like domain ACU11_06760 SM00382 ATPases associated with a variety of cellular activities ACU11_06800 SM00732 Likely ribonuclease with RNase H fold. ACU11_06880 SM00267 diguanylate cyclase ACU11_06885 SM00829 Enoylreductase ACU11_06900 SM01092 CO dehydrogenase flavoprotein C-terminal domain ACU11_06905 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ACU11_07035 SM00855 Phosphoglycerate mutase family ACU11_07140 SM00448 cheY-homologous receiver domain ACU11_07145 SM00138 Methyltransferase, chemotaxis proteins ACU11_07150 SM00052 Putative diguanylate phosphodiesterase ACU11_07150 SM00448 cheY-homologous receiver domain ACU11_07155 SM00260 Two component signalling adaptor domain ACU11_07160 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACU11_07160 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACU11_07165 SM00073 Histidine Phosphotransfer domain ACU11_07165 SM00260 Two component signalling adaptor domain ACU11_07165 SM00387 Histidine kinase-like ATPases ACU11_07165 SM01231 ACU11_07165 ACU11_07175 SM00487 DEAD-like helicases superfamily ACU11_07175 SM00490 helicase superfamily c-terminal domain ACU11_07175 SM00982 ACU11_07175 ACU11_07175 SM01058 CarD-like/TRCF domain ACU11_07190 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACU11_07190 SM00387 Histidine kinase-like ATPases ACU11_07190 SM00388 His Kinase A (phosphoacceptor) domain ACU11_07195 SM00645 Papain family cysteine protease ACU11_07275 SM00829 Enoylreductase ACU11_07335 SM00487 DEAD-like helicases superfamily ACU11_07335 SM00490 helicase superfamily c-terminal domain ACU11_07340 SM00052 Putative diguanylate phosphodiesterase ACU11_07340 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ACU11_07340 SM00091 PAS domain ACU11_07340 SM00267 diguanylate cyclase ACU11_07345 SM00363 S4 RNA-binding domain ACU11_07375 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACU11_07375 SM00387 Histidine kinase-like ATPases ACU11_07375 SM00388 His Kinase A (phosphoacceptor) domain ACU11_07380 SM00448 cheY-homologous receiver domain ACU11_07380 SM00862 Transcriptional regulatory protein, C terminal ACU11_07410 SM00382 ATPases associated with a variety of cellular activities ACU11_07540 SM00316 Ribosomal protein S1-like RNA-binding domain ACU11_07585 SM01351 ACU11_07585 ACU11_07600 SM00977 TilS substrate C-terminal domain ACU11_07605 SM00098 Alkaline phosphatase homologues ACU11_07705 SM01160 ACU11_07705 ACU11_07715 SM01126 ACU11_07715 ACU11_07800 SM00271 DnaJ molecular chaperone homology domain ACU11_07825 SM00382 ATPases associated with a variety of cellular activities ACU11_07850 SM00861 Transketolase, pyrimidine binding domain ACU11_07860 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. ACU11_07865 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ACU11_07920 SM00382 ATPases associated with a variety of cellular activities ACU11_07925 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACU11_07945 SM00984 UDP binding domain ACU11_07965 SM00354 helix_turn _helix lactose operon repressor ACU11_07995 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ACU11_08020 SM00316 Ribosomal protein S1-like RNA-binding domain ACU11_08020 SM00357 Cold shock protein domain ACU11_08020 SM00955 ACU11_08020 ACU11_08030 SM00967 RNA 2'-O ribose methyltransferase substrate binding ACU11_08050 SM00479 ACU11_08050 ACU11_08065 SM00382 ATPases associated with a variety of cellular activities ACU11_08100 SM00947 Carbonic anhydrase ACU11_08110 SM00478 endonuclease III ACU11_08135 SM00450 Rhodanese Homology Domain ACU11_08145 SM00644 ACU11_08145 ACU11_08175 SM00981 ACU11_08175 ACU11_08205 SM00479 ACU11_08205 ACU11_08230 SM00947 Carbonic anhydrase ACU11_08280 SM00968 SMC proteins Flexible Hinge Domain ACU11_08285 SM00771 ZipA, C-terminal domain (FtsZ-binding) ACU11_08295 SM00292 breast cancer carboxy-terminal domain ACU11_08295 SM00532 Ligase N family ACU11_08315 SM00434 DNA Topoisomerase IV ACU11_08340 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain ACU11_08365 SM00873 B3/4 domain ACU11_08365 SM00874 tRNA synthetase B5 domain ACU11_08365 SM00896 Ferredoxin-fold anticodon binding domain ACU11_08370 SM00411 bacterial (prokaryotic) histone like domain ACU11_08375 SM00422 helix_turn_helix, mercury resistance ACU11_08460 SM00861 Transketolase, pyrimidine binding domain ACU11_08465 SM00507 HNH nucleases ACU11_08510 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ACU11_08510 SM00091 PAS domain ACU11_08510 SM00387 Histidine kinase-like ATPases ACU11_08510 SM00388 His Kinase A (phosphoacceptor) domain ACU11_08510 SM00448 cheY-homologous receiver domain ACU11_08520 SM00478 endonuclease III ACU11_08530 SM00382 ATPases associated with a variety of cellular activities ACU11_08530 SM00962 SRP54-type protein, GTPase domain ACU11_08530 SM00963 SRP54-type protein, helical bundle domain ACU11_08535 SM00342 helix_turn_helix, arabinose operon control protein ACU11_08560 SM01130 ACU11_08560 ACU11_08625 SM00944 Pro-kumamolisin, activation domain ACU11_08680 SM00387 Histidine kinase-like ATPases ACU11_08750 SM00344 helix_turn_helix ASNC type ACU11_08765 SM01323 ACU11_08765 ACU11_08845 SM00354 helix_turn _helix lactose operon repressor ACU11_08885 SM00448 cheY-homologous receiver domain ACU11_08885 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ACU11_08890 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ACU11_08890 SM00091 PAS domain ACU11_08890 SM00387 Histidine kinase-like ATPases ACU11_08890 SM00388 His Kinase A (phosphoacceptor) domain ACU11_08890 SM00448 cheY-homologous receiver domain ACU11_08890 SM01079 ACU11_08890 ACU11_08935 SM00267 diguanylate cyclase ACU11_08935 SM00448 cheY-homologous receiver domain ACU11_08945 SM01230 ACU11_08945 ACU11_08955 SM01230 ACU11_08955 ACU11_09020 SM01126 ACU11_09020 ACU11_09050 SM00382 ATPases associated with a variety of cellular activities ACU11_09080 SM00116 Domain in cystathionine beta-synthase and other proteins. ACU11_09080 SM01091 Transporter associated domain ACU11_09105 SM00729 Elongator protein 3, MiaB family, Radical SAM ACU11_09170 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACU11_09170 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACU11_09175 SM00260 Two component signalling adaptor domain ACU11_09180 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACU11_09180 SM00267 diguanylate cyclase ACU11_09320 SM00528 Domain in histone-like proteins of HNS family ACU11_09335 SM00474 3'-5' exonuclease ACU11_09370 SM00646 ACU11_09370 ACU11_09375 SM00853 MutL C terminal dimerisation domain ACU11_09375 SM01340 ACU11_09375 ACU11_09395 SM00822 ACU11_09395 ACU11_09410 SM00052 Putative diguanylate phosphodiesterase ACU11_09410 SM00267 diguanylate cyclase ACU11_09420 SM01322 ACU11_09420 ACU11_09430 SM00357 Cold shock protein domain ACU11_09455 SM00382 ATPases associated with a variety of cellular activities ACU11_09455 SM00487 DEAD-like helicases superfamily ACU11_09455 SM00490 helicase superfamily c-terminal domain ACU11_09460 SM00382 ATPases associated with a variety of cellular activities ACU11_09500 SM00052 Putative diguanylate phosphodiesterase ACU11_09500 SM00267 diguanylate cyclase ACU11_09500 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACU11_09510 SM00841 Elongation factor P, C-terminal ACU11_09510 SM01185 ACU11_09510 ACU11_09560 SM00507 HNH nucleases ACU11_09605 SM00670 Large family of predicted nucleotide-binding domains ACU11_09625 SM01130 ACU11_09625 ACU11_09650 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain ACU11_09695 SM00646 ACU11_09695 ACU11_09765 SM00052 Putative diguanylate phosphodiesterase ACU11_09765 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACU11_09765 SM00267 diguanylate cyclase ACU11_09775 SM00448 cheY-homologous receiver domain ACU11_09780 SM00387 Histidine kinase-like ATPases ACU11_09790 SM00014 Acid phosphatase homologues ACU11_09985 SM01007 Class II Aldolase and Adducin N-terminal domain ACU11_10030 SM00841 Elongation factor P, C-terminal ACU11_10030 SM01185 ACU11_10030 ACU11_10035 SM00822 ACU11_10035 ACU11_10055 SM00899 ACU11_10055 ACU11_10095 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain ACU11_10105 SM00851 MGS-like domain ACU11_10105 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ACU11_10140 SM00937 ACU11_10140 ACU11_10150 SM00448 cheY-homologous receiver domain ACU11_10150 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ACU11_10155 SM00073 Histidine Phosphotransfer domain ACU11_10155 SM00387 Histidine kinase-like ATPases ACU11_10155 SM00388 His Kinase A (phosphoacceptor) domain ACU11_10155 SM00448 cheY-homologous receiver domain ACU11_10180 SM00966 SpoVT / AbrB like domain ACU11_10200 SM00052 Putative diguanylate phosphodiesterase ACU11_10200 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACU11_10200 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ACU11_10200 SM00091 PAS domain ACU11_10200 SM00267 diguanylate cyclase ACU11_10205 SM00448 cheY-homologous receiver domain ACU11_10215 SM00138 Methyltransferase, chemotaxis proteins ACU11_10220 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACU11_10220 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACU11_10230 SM00260 Two component signalling adaptor domain ACU11_10240 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACU11_10240 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACU11_10245 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACU11_10245 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACU11_10250 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACU11_10250 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACU11_10255 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACU11_10255 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACU11_10260 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACU11_10260 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACU11_10265 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACU11_10265 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACU11_10270 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACU11_10270 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACU11_10275 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACU11_10285 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACU11_10285 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACU11_10300 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACU11_10300 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACU11_10305 SM00073 Histidine Phosphotransfer domain ACU11_10305 SM00260 Two component signalling adaptor domain ACU11_10305 SM00387 Histidine kinase-like ATPases ACU11_10305 SM01231 ACU11_10305 ACU11_10310 SM00448 cheY-homologous receiver domain ACU11_10320 SM00260 Two component signalling adaptor domain ACU11_10435 SM00073 Histidine Phosphotransfer domain ACU11_10435 SM00260 Two component signalling adaptor domain ACU11_10435 SM00387 Histidine kinase-like ATPases ACU11_10435 SM01231 ACU11_10435 ACU11_10445 SM00448 cheY-homologous receiver domain ACU11_10460 SM00382 ATPases associated with a variety of cellular activities ACU11_10460 SM00962 SRP54-type protein, GTPase domain ACU11_10475 SM00052 Putative diguanylate phosphodiesterase ACU11_10475 SM00267 diguanylate cyclase ACU11_10480 SM00267 diguanylate cyclase ACU11_10490 SM00267 diguanylate cyclase ACU11_10540 SM00382 ATPases associated with a variety of cellular activities ACU11_10570 SM01126 ACU11_10570 ACU11_10595 SM00822 ACU11_10595 ACU11_10615 SM00382 ATPases associated with a variety of cellular activities ACU11_10620 SM00448 cheY-homologous receiver domain ACU11_10630 SM00421 helix_turn_helix, Lux Regulon ACU11_10630 SM00448 cheY-homologous receiver domain ACU11_10670 SM00047 Lysozyme subfamily 2 ACU11_10715 SM00260 Two component signalling adaptor domain ACU11_10715 SM00448 cheY-homologous receiver domain ACU11_10720 SM00858 ACU11_10720 ACU11_10735 SM00387 Histidine kinase-like ATPases ACU11_10740 SM00052 Putative diguanylate phosphodiesterase ACU11_10740 SM00267 diguanylate cyclase ACU11_10740 SM00448 cheY-homologous receiver domain ACU11_10745 SM00091 PAS domain ACU11_10745 SM00387 Histidine kinase-like ATPases ACU11_10750 SM00052 Putative diguanylate phosphodiesterase ACU11_10750 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ACU11_10750 SM00091 PAS domain ACU11_10750 SM00267 diguanylate cyclase ACU11_10775 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACU11_10800 SM00382 ATPases associated with a variety of cellular activities ACU11_10800 SM01086 C-terminal, D2-small domain, of ClpB protein ACU11_10805 SM00316 Ribosomal protein S1-like RNA-binding domain ACU11_10835 SM00382 ATPases associated with a variety of cellular activities ACU11_10835 SM00843 ACU11_10835 ACU11_10855 SM00382 ATPases associated with a variety of cellular activities ACU11_10895 SM00562 ACU11_10895 ACU11_10905 SM00028 Tetratricopeptide repeats ACU11_10920 SM00564 beta-propeller repeat ACU11_10925 SM00382 ATPases associated with a variety of cellular activities ACU11_10930 SM00852 Probable molybdopterin binding domain ACU11_10940 SM00450 Rhodanese Homology Domain ACU11_11000 SM00852 Probable molybdopterin binding domain ACU11_11075 SM00052 Putative diguanylate phosphodiesterase ACU11_11085 SM00869 Autotransporter beta-domain ACU11_11090 SM00421 helix_turn_helix, Lux Regulon ACU11_11090 SM00448 cheY-homologous receiver domain ACU11_11095 SM00387 Histidine kinase-like ATPases ACU11_11095 SM00388 His Kinase A (phosphoacceptor) domain ACU11_11115 SM00869 Autotransporter beta-domain ACU11_11225 SM01126 ACU11_11225 ACU11_11300 SM00448 cheY-homologous receiver domain ACU11_11300 SM00862 Transcriptional regulatory protein, C terminal ACU11_11310 SM00387 Histidine kinase-like ATPases ACU11_11335 SM00331 Sigma factor PP2C-like phosphatases ACU11_11335 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain ACU11_11360 SM00240 Forkhead associated domain ACU11_11390 SM00382 ATPases associated with a variety of cellular activities ACU11_11390 SM01086 C-terminal, D2-small domain, of ClpB protein ACU11_11515 SM00363 S4 RNA-binding domain ACU11_11520 SM00316 Ribosomal protein S1-like RNA-binding domain ACU11_11525 SM00421 helix_turn_helix, Lux Regulon ACU11_11525 SM00448 cheY-homologous receiver domain ACU11_11530 SM00450 Rhodanese Homology Domain ACU11_11550 SM00984 UDP binding domain ACU11_11565 SM00823 Phosphopantetheine attachment site ACU11_11565 SM00824 Thioesterase ACU11_11570 SM00823 Phosphopantetheine attachment site ACU11_11575 SM01126 ACU11_11575 ACU11_11615 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ACU11_11615 SM00465 GIY-YIG type nucleases (URI domain) ACU11_11625 SM00226 Low molecular weight phosphatase family ACU11_11640 SM00382 ATPases associated with a variety of cellular activities ACU11_11655 SM00849 Metallo-beta-lactamase superfamily ACU11_11670 SM00382 ATPases associated with a variety of cellular activities ACU11_11720 SM00382 ATPases associated with a variety of cellular activities ACU11_11825 SM01126 ACU11_11825 ACU11_11880 SM00220 Serine/Threonine protein kinases, catalytic domain ACU11_11880 SM01260 ACU11_11880 ACU11_11925 SM00448 cheY-homologous receiver domain ACU11_11930 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACU11_11930 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ACU11_11930 SM00091 PAS domain ACU11_11930 SM00387 Histidine kinase-like ATPases ACU11_11930 SM00388 His Kinase A (phosphoacceptor) domain ACU11_11930 SM00448 cheY-homologous receiver domain ACU11_11935 SM00316 Ribosomal protein S1-like RNA-binding domain ACU11_11935 SM00732 Likely ribonuclease with RNase H fold. ACU11_12005 SM00479 ACU11_12005 ACU11_12015 SM00529 Helix-turn-helix diphteria tox regulatory element ACU11_12030 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACU11_12085 SM00116 Domain in cystathionine beta-synthase and other proteins. ACU11_12085 SM01240 ACU11_12085 ACU11_12115 SM00822 ACU11_12115 ACU11_12135 SM00411 bacterial (prokaryotic) histone like domain ACU11_12140 SM00316 Ribosomal protein S1-like RNA-binding domain ACU11_12215 SM00354 helix_turn _helix lactose operon repressor ACU11_12240 SM00363 S4 RNA-binding domain ACU11_12265 SM00382 ATPases associated with a variety of cellular activities ACU11_12325 SM00382 ATPases associated with a variety of cellular activities ACU11_12330 SM00382 ATPases associated with a variety of cellular activities ACU11_12365 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain ACU11_12375 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase ACU11_12395 SM00859 Semialdehyde dehydrogenase, NAD binding domain ACU11_12435 SM00840 ACU11_12435 ACU11_12465 SM01234 ACU11_12465 ACU11_12515 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain ACU11_12525 SM00382 ATPases associated with a variety of cellular activities ACU11_12565 SM00382 ATPases associated with a variety of cellular activities ACU11_12575 SM01103 ACU11_12575 ACU11_12585 SM00257 Lysin motif ACU11_12605 SM00463 Small MutS-related domain ACU11_12630 SM01192 ACU11_12630 ACU11_12630 SM01193 ACU11_12630 ACU11_12655 SM00387 Histidine kinase-like ATPases ACU11_12655 SM00433 TopoisomeraseII ACU11_12680 SM01091 Transporter associated domain ACU11_12705 SM00382 ATPases associated with a variety of cellular activities ACU11_12715 SM00729 Elongator protein 3, MiaB family, Radical SAM ACU11_12890 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACU11_12890 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACU11_12995 SM00830 Chorismate mutase type II ACU11_13015 SM00240 Forkhead associated domain ACU11_13035 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACU11_13035 SM00866 ACU11_13035 ACU11_13095 SM00487 DEAD-like helicases superfamily ACU11_13095 SM00490 helicase superfamily c-terminal domain ACU11_13290 SM00530 Helix-turn-helix XRE-family like proteins ACU11_13430 SM01001 AIR carboxylase ACU11_13450 SM00316 Ribosomal protein S1-like RNA-binding domain ACU11_13450 SM00322 K homology RNA-binding domain ACU11_13455 SM01387 ACU11_13455 ACU11_13475 SM00316 Ribosomal protein S1-like RNA-binding domain ACU11_13475 SM00322 K homology RNA-binding domain ACU11_13525 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ACU11_13530 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ACU11_13575 SM00822 ACU11_13575 ACU11_13590 SM00052 Putative diguanylate phosphodiesterase ACU11_13590 SM00267 diguanylate cyclase ACU11_13590 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACU11_13655 SM00859 Semialdehyde dehydrogenase, NAD binding domain ACU11_13685 SM00257 Lysin motif ACU11_13730 SM00729 Elongator protein 3, MiaB family, Radical SAM ACU11_13775 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACU11_13775 SM00267 diguanylate cyclase ACU11_13785 SM00267 diguanylate cyclase ACU11_13880 SM00357 Cold shock protein domain ACU11_13910 SM00382 ATPases associated with a variety of cellular activities ACU11_13960 SM00347 helix_turn_helix multiple antibiotic resistance protein ACU11_13990 SM00631 ACU11_13990 ACU11_13995 SM01217 ACU11_13995 ACU11_14030 SM00347 helix_turn_helix multiple antibiotic resistance protein ACU11_14035 SM00342 helix_turn_helix, arabinose operon control protein ACU11_14040 SM00434 DNA Topoisomerase IV ACU11_14065 SM00710 Parallel beta-helix repeats ACU11_14065 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses ACU11_14070 SM01172 ACU11_14070 ACU11_14100 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ACU11_14110 SM00972 Spore Coat Protein U domain ACU11_14125 SM00972 Spore Coat Protein U domain ACU11_14150 SM00267 diguanylate cyclase ACU11_14180 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ACU11_14220 SM00481 DNA polymerase alpha chain like domain ACU11_14525 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ACU11_14530 SM00869 Autotransporter beta-domain ACU11_14580 SM00487 DEAD-like helicases superfamily ACU11_14580 SM00490 helicase superfamily c-terminal domain ACU11_14595 SM00357 Cold shock protein domain ACU11_14630 SM01118 ACU11_14630 ACU11_14640 SM00448 cheY-homologous receiver domain ACU11_14655 SM00358 Double-stranded RNA binding motif ACU11_14655 SM00535 Ribonuclease III family ACU11_14670 SM00838 Elongation factor G C-terminus ACU11_14675 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ACU11_14725 SM00530 Helix-turn-helix XRE-family like proteins ACU11_14750 SM00812 Alpha-L-fucosidase ACU11_14765 SM00387 Histidine kinase-like ATPases ACU11_14765 SM00388 His Kinase A (phosphoacceptor) domain ACU11_14765 SM00448 cheY-homologous receiver domain ACU11_14770 SM00387 Histidine kinase-like ATPases ACU11_14770 SM00388 His Kinase A (phosphoacceptor) domain ACU11_14770 SM00448 cheY-homologous receiver domain ACU11_14775 SM00387 Histidine kinase-like ATPases ACU11_14775 SM00388 His Kinase A (phosphoacceptor) domain ACU11_14775 SM00448 cheY-homologous receiver domain ACU11_14780 SM00387 Histidine kinase-like ATPases ACU11_14780 SM00388 His Kinase A (phosphoacceptor) domain ACU11_14780 SM00448 cheY-homologous receiver domain ACU11_14785 SM00867 YceI-like domain ACU11_14795 SM00867 YceI-like domain ACU11_14855 SM00116 Domain in cystathionine beta-synthase and other proteins. ACU11_14935 SM00244 prohibitin homologues ACU11_14980 SM00812 Alpha-L-fucosidase ACU11_14985 SM00636 ACU11_14985 ACU11_15000 SM00758 ACU11_15000 ACU11_15000 SM01217 ACU11_15000 ACU11_15005 SM00382 ATPases associated with a variety of cellular activities ACU11_15020 SM01149 ACU11_15020 ACU11_15060 SM00369 Leucine-rich repeats, typical (most populated) subfamily ACU11_15085 SM01126 ACU11_15085 ACU11_15140 SM01126 ACU11_15140 ACU11_15150 SM00260 Two component signalling adaptor domain ACU11_15160 SM00073 Histidine Phosphotransfer domain ACU11_15160 SM00260 Two component signalling adaptor domain ACU11_15160 SM00387 Histidine kinase-like ATPases ACU11_15160 SM00448 cheY-homologous receiver domain ACU11_15160 SM01231 ACU11_15160 ACU11_15165 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACU11_15170 SM00260 Two component signalling adaptor domain ACU11_15175 SM00448 cheY-homologous receiver domain ACU11_15180 SM00448 cheY-homologous receiver domain ACU11_15205 SM00491 ACU11_15205 ACU11_15230 SM00954 Region found in RelA / SpoT proteins ACU11_15285 SM00382 ATPases associated with a variety of cellular activities ACU11_15285 SM00487 DEAD-like helicases superfamily ACU11_15285 SM00490 helicase superfamily c-terminal domain ACU11_15285 SM00847 Helicase associated domain (HA2) Add an annotation ACU11_15295 SM00341 Helicase and RNase D C-terminal ACU11_15295 SM00487 DEAD-like helicases superfamily ACU11_15295 SM00490 helicase superfamily c-terminal domain ACU11_15295 SM00956 ACU11_15295 ACU11_15305 SM00448 cheY-homologous receiver domain ACU11_15320 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACU11_15335 SM00091 PAS domain ACU11_15335 SM00911 HWE histidine kinase ACU11_15425 SM00530 Helix-turn-helix XRE-family like proteins ACU11_15660 SM00382 ATPases associated with a variety of cellular activities ACU11_15670 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ACU11_15705 SM00834 Putative regulatory protein ACU11_15745 SM00382 ATPases associated with a variety of cellular activities ACU11_15875 SM00382 ATPases associated with a variety of cellular activities ACU11_15875 SM01086 C-terminal, D2-small domain, of ClpB protein ACU11_15890 SM00533 DNA-binding domain of DNA mismatch repair MUTS family ACU11_15890 SM00534 ATPase domain of DNA mismatch repair MUTS family ACU11_15905 SM00363 S4 RNA-binding domain ACU11_15960 SM00382 ATPases associated with a variety of cellular activities ACU11_15960 SM00962 SRP54-type protein, GTPase domain ACU11_15960 SM00963 SRP54-type protein, helical bundle domain ACU11_15980 SM00813 Alpha-L-arabinofuranosidase C-terminus ACU11_15995 SM00387 Histidine kinase-like ATPases ACU11_15995 SM00388 His Kinase A (phosphoacceptor) domain ACU11_15995 SM00448 cheY-homologous receiver domain ACU11_16000 SM00387 Histidine kinase-like ATPases ACU11_16000 SM00388 His Kinase A (phosphoacceptor) domain ACU11_16035 SM00342 helix_turn_helix, arabinose operon control protein ACU11_16040 SM00862 Transcriptional regulatory protein, C terminal ACU11_16050 SM01126 ACU11_16050 ACU11_16055 SM00382 ATPases associated with a variety of cellular activities ACU11_16095 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ACU11_16140 SM00904 Riboflavin kinase ACU11_16275 SM00564 beta-propeller repeat ACU11_16280 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACU11_16320 SM00881 CoA binding domain ACU11_16330 SM00387 Histidine kinase-like ATPases ACU11_16330 SM00388 His Kinase A (phosphoacceptor) domain ACU11_16335 SM00382 ATPases associated with a variety of cellular activities ACU11_16335 SM00448 cheY-homologous receiver domain ACU11_16415 SM00387 Histidine kinase-like ATPases ACU11_16415 SM00388 His Kinase A (phosphoacceptor) domain ACU11_16420 SM00448 cheY-homologous receiver domain ACU11_16420 SM00862 Transcriptional regulatory protein, C terminal ACU11_16435 SM00642 Alpha-amylase domain ACU11_16450 SM00528 Domain in histone-like proteins of HNS family ACU11_16505 SM00869 Autotransporter beta-domain ACU11_16570 SM00967 RNA 2'-O ribose methyltransferase substrate binding ACU11_16645 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACU11_16645 SM00387 Histidine kinase-like ATPases ACU11_16675 SM00506 Appr-1"-p processing enzyme ACU11_16705 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ACU11_16720 SM00849 Metallo-beta-lactamase superfamily ACU11_16735 SM00382 ATPases associated with a variety of cellular activities ACU11_16830 SM00861 Transketolase, pyrimidine binding domain ACU11_16865 SM00028 Tetratricopeptide repeats ACU11_16865 SM00327 von Willebrand factor (vWF) type A domain ACU11_16870 SM00327 von Willebrand factor (vWF) type A domain ACU11_16885 SM00382 ATPases associated with a variety of cellular activities ACU11_16890 SM00965 Secretin and TonB N terminus short domain ACU11_16940 SM00487 DEAD-like helicases superfamily ACU11_16940 SM00490 helicase superfamily c-terminal domain ACU11_16950 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ACU11_16950 SM00954 Region found in RelA / SpoT proteins ACU11_16955 SM01409 ACU11_16955 ACU11_16960 SM00072 Guanylate kinase homologues. ACU11_16985 SM00729 Elongator protein 3, MiaB family, Radical SAM ACU11_17010 SM01011 Aminopeptidase P, N-terminal domain ACU11_17175 SM00464 Found in ATP-dependent protease La (LON) ACU11_17240 SM00342 helix_turn_helix, arabinose operon control protein ACU11_17245 SM00862 Transcriptional regulatory protein, C terminal ACU11_17275 SM00917 LeuA allosteric (dimerisation) domain ACU11_17280 SM01329 ACU11_17280 ACU11_17305 SM00267 diguanylate cyclase ACU11_17360 SM00919 Malic enzyme, NAD binding domain ACU11_17360 SM01274 ACU11_17360 ACU11_17375 SM00387 Histidine kinase-like ATPases ACU11_17375 SM00388 His Kinase A (phosphoacceptor) domain ACU11_17375 SM00448 cheY-homologous receiver domain ACU11_17415 SM00421 helix_turn_helix, Lux Regulon ACU11_17415 SM00448 cheY-homologous receiver domain ACU11_17425 SM00387 Histidine kinase-like ATPases ACU11_17425 SM00388 His Kinase A (phosphoacceptor) domain ACU11_17430 SM00448 cheY-homologous receiver domain ACU11_17430 SM00862 Transcriptional regulatory protein, C terminal ACU11_17445 SM00822 ACU11_17445 ACU11_17450 SM00354 helix_turn _helix lactose operon repressor ACU11_17470 SM00642 Alpha-amylase domain ACU11_17480 SM01154 ACU11_17480 ACU11_17510 SM00450 Rhodanese Homology Domain ACU11_17520 SM00506 Appr-1"-p processing enzyme ACU11_17570 SM01126 ACU11_17570 ACU11_17625 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACU11_17625 SM00866 ACU11_17625 ACU11_17690 SM00382 ATPases associated with a variety of cellular activities ACU11_17705 SM01211 ACU11_17705 ACU11_17765 SM00656 ACU11_17765 ACU11_17795 SM00528 Domain in histone-like proteins of HNS family ACU11_17810 SM00382 ATPases associated with a variety of cellular activities ACU11_17840 SM00882 Coenzyme A transferase ACU11_17845 SM00882 Coenzyme A transferase ACU11_17880 SM00893 Electron transfer flavoprotein domain ACU11_17885 SM00893 Electron transfer flavoprotein domain ACU11_17985 SM00382 ATPases associated with a variety of cellular activities ACU11_18000 SM00116 Domain in cystathionine beta-synthase and other proteins. ACU11_18035 SM00487 DEAD-like helicases superfamily ACU11_18035 SM00490 helicase superfamily c-terminal domain ACU11_18055 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACU11_18080 SM00825 Beta-ketoacyl synthase ACU11_18145 SM00382 ATPases associated with a variety of cellular activities ACU11_18170 SM00382 ATPases associated with a variety of cellular activities ACU11_18170 SM00448 cheY-homologous receiver domain ACU11_18175 SM00387 Histidine kinase-like ATPases ACU11_18190 SM00830 Chorismate mutase type II ACU11_18200 SM00382 ATPases associated with a variety of cellular activities ACU11_18270 SM00986 Uracil DNA glycosylase superfamily ACU11_18270 SM00987 UreE urease accessory protein, C-terminal domain ACU11_18300 SM00382 ATPases associated with a variety of cellular activities ACU11_18300 SM00930 ACU11_18300 ACU11_18375 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ACU11_18375 SM00091 PAS domain ACU11_18375 SM00387 Histidine kinase-like ATPases ACU11_18375 SM00388 His Kinase A (phosphoacceptor) domain ACU11_18375 SM00448 cheY-homologous receiver domain ACU11_18395 SM01005 Alanine racemase, C-terminal domain ACU11_18405 SM00344 helix_turn_helix ASNC type ACU11_18445 SM00448 cheY-homologous receiver domain ACU11_18445 SM00862 Transcriptional regulatory protein, C terminal ACU11_18450 SM00387 Histidine kinase-like ATPases ACU11_18450 SM00388 His Kinase A (phosphoacceptor) domain ACU11_18480 SM00382 ATPases associated with a variety of cellular activities ACU11_18490 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. ACU11_18495 SM00986 Uracil DNA glycosylase superfamily ACU11_18495 SM00987 UreE urease accessory protein, C-terminal domain ACU11_18565 SM00448 cheY-homologous receiver domain ACU11_18565 SM00850 LytTr DNA-binding domain ACU11_18570 SM00387 Histidine kinase-like ATPases ACU11_18585 SM00138 Methyltransferase, chemotaxis proteins ACU11_18590 SM00448 cheY-homologous receiver domain ACU11_18600 SM00382 ATPases associated with a variety of cellular activities ACU11_18600 SM00448 cheY-homologous receiver domain ACU11_18685 SM00382 ATPases associated with a variety of cellular activities ACU11_18765 SM00867 YceI-like domain ACU11_18900 SM00912 haemagglutination activity domain ACU11_19050 SM00382 ATPases associated with a variety of cellular activities ACU11_19075 SM00530 Helix-turn-helix XRE-family like proteins ACU11_19085 SM00382 ATPases associated with a variety of cellular activities ACU11_19105 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. ACU11_19225 SM00257 Lysin motif ACU11_19250 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain ACU11_19250 SM00437 Bacterial DNA topoisomerase I DNA-binding domain ACU11_19250 SM00493 ACU11_19250 ACU11_19305 SM00487 DEAD-like helicases superfamily ACU11_19305 SM00490 helicase superfamily c-terminal domain ACU11_19340 SM00878 Biotin carboxylase C-terminal domain ACU11_19365 SM00530 Helix-turn-helix XRE-family like proteins ACU11_19395 SM00798 AICARFT/IMPCHase bienzyme ACU11_19395 SM00851 MGS-like domain ACU11_19400 SM01209 ACU11_19400 ACU11_19400 SM01210 ACU11_19400 ACU11_19430 SM00563 Phosphate acyltransferases ACU11_19480 SM00052 Putative diguanylate phosphodiesterase ACU11_19480 SM00267 diguanylate cyclase ACU11_19480 SM00448 cheY-homologous receiver domain ACU11_19485 SM00073 Histidine Phosphotransfer domain ACU11_19485 SM00387 Histidine kinase-like ATPases ACU11_19485 SM00388 His Kinase A (phosphoacceptor) domain ACU11_19485 SM00448 cheY-homologous receiver domain ACU11_19540 SM00100 Cyclic nucleotide-monophosphate binding domain ACU11_19540 SM00419 helix_turn_helix, cAMP Regulatory protein ACU11_19560 SM00903 Flavin reductase like domain ACU11_19590 SM00046 Diacylglycerol kinase catalytic domain (presumed) ACU11_19605 SM00271 DnaJ molecular chaperone homology domain ACU11_19635 SM00470 ParB-like nuclease domain ACU11_19655 SM01259 ACU11_19655 ACU11_19685 SM00836 DALR anticodon binding domain ACU11_19685 SM01016 Arginyl tRNA synthetase N terminal dom ACU11_19800 SM00938 Nitrogen regulatory protein P-II ACU11_19810 SM00382 ATPases associated with a variety of cellular activities ACU11_19820 SM00052 Putative diguanylate phosphodiesterase ACU11_19880 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ACU11_19925 SM01060 ACU11_19925 ACU11_19965 SM00849 Metallo-beta-lactamase superfamily ACU11_20060 SM00387 Histidine kinase-like ATPases ACU11_20060 SM00388 His Kinase A (phosphoacceptor) domain ACU11_20065 SM00448 cheY-homologous receiver domain ACU11_20065 SM00862 Transcriptional regulatory protein, C terminal ACU11_20085 SM00248 ankyrin repeats ACU11_20090 SM01060 ACU11_20090 ACU11_20110 SM00491 ACU11_20110 ACU11_20140 SM00477 DNA/RNA non-specific endonuclease ACU11_20140 SM00892 DNA/RNA non-specific endonuclease ACU11_20155 SM01004 Delta-aminolevulinic acid dehydratase ACU11_20225 SM00388 His Kinase A (phosphoacceptor) domain ACU11_20230 SM00387 Histidine kinase-like ATPases ACU11_20235 SM00448 cheY-homologous receiver domain ACU11_20235 SM00862 Transcriptional regulatory protein, C terminal ACU11_20310 SM01126 ACU11_20310 ACU11_20435 SM00642 Alpha-amylase domain ACU11_20445 SM00642 Alpha-amylase domain ACU11_20455 SM00642 Alpha-amylase domain ACU11_20460 SM00642 Alpha-amylase domain ACU11_20470 SM00267 diguanylate cyclase ACU11_20540 SM00382 ATPases associated with a variety of cellular activities ACU11_20655 SM00369 Leucine-rich repeats, typical (most populated) subfamily ACU11_20680 SM00758 ACU11_20680 ACU11_20680 SM01217 ACU11_20680 ACU11_20690 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain ACU11_20705 SM00354 helix_turn _helix lactose operon repressor ACU11_20780 SM00382 ATPases associated with a variety of cellular activities ACU11_20790 SM00836 DALR anticodon binding domain ACU11_20860 SM00729 Elongator protein 3, MiaB family, Radical SAM ACU11_20860 SM00876 Biotin and Thiamin Synthesis associated domain ACU11_20915 SM01228 ACU11_20915 ACU11_20925 SM01126 ACU11_20925 ACU11_20985 SM00090 RIO-like kinase ACU11_20990 SM00346 helix_turn_helix isocitrate lyase regulation ACU11_21010 SM00998 Adenylosuccinate lyase C-terminus ACU11_21030 SM00882 Coenzyme A transferase ACU11_21035 SM00882 Coenzyme A transferase ACU11_21070 SM00342 helix_turn_helix, arabinose operon control protein ACU11_21090 SM00347 helix_turn_helix multiple antibiotic resistance protein ACU11_21095 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ACU11_21125 SM01126 ACU11_21125 ACU11_21170 SM00633 Glycosyl hydrolase family 10 ACU11_21175 SM00633 Glycosyl hydrolase family 10 ACU11_21210 SM00878 Biotin carboxylase C-terminal domain ACU11_21265 SM00833 Cobalamin synthesis protein cobW C-terminal domain ACU11_21295 SM00347 helix_turn_helix multiple antibiotic resistance protein ACU11_21340 SM00829 Enoylreductase ACU11_21365 SM00487 DEAD-like helicases superfamily ACU11_21365 SM00490 helicase superfamily c-terminal domain ACU11_21365 SM00847 Helicase associated domain (HA2) Add an annotation ACU11_21420 SM01126 ACU11_21420 ACU11_21435 SM00829 Enoylreductase ACU11_21440 SM00563 Phosphate acyltransferases ACU11_21450 SM00354 helix_turn _helix lactose operon repressor ACU11_21470 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family ACU11_21500 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACU11_21500 SM00388 His Kinase A (phosphoacceptor) domain ACU11_21565 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACU11_21565 SM00091 PAS domain ACU11_21565 SM00267 diguanylate cyclase ACU11_21620 SM00014 Acid phosphatase homologues ACU11_21630 SM00028 Tetratricopeptide repeats ACU11_21780 SM00857 Resolvase, N terminal domain