locus-tag class description IYN96_00005 PF00308 Bacterial dnaA protein IYN96_00005 PF08299 Bacterial dnaA protein helix-turn-helix IYN96_00005 PF11638 DnaA N-terminal domain IYN96_00015 PF02463 RecF/RecN/SMC N terminal domain IYN96_00020 PF00204 DNA gyrase B IYN96_00020 PF00986 DNA gyrase B subunit, carboxyl terminus IYN96_00020 PF18053 DNA gyrase B subunit insert domain IYN96_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IYN96_00020 PF01751 Toprim domain IYN96_00030 PF01435 Peptidase family M48 IYN96_00040 PF03544 Gram-negative bacterial TonB protein C-terminal IYN96_00045 PF01618 MotA/TolQ/ExbB proton channel family IYN96_00050 PF02472 Biopolymer transport protein ExbD/TolR IYN96_00055 PF02472 Biopolymer transport protein ExbD/TolR IYN96_00060 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ IYN96_00070 PF13091 PLD-like domain IYN96_00070 PF13396 Phospholipase_D-nuclease N-terminal IYN96_00085 PF08240 Alcohol dehydrogenase GroES-like domain IYN96_00085 PF00107 Zinc-binding dehydrogenase IYN96_00090 PF00150 Cellulase (glycosyl hydrolase family 5) IYN96_00100 PF00150 Cellulase (glycosyl hydrolase family 5) IYN96_00115 PF00150 Cellulase (glycosyl hydrolase family 5) IYN96_00125 PF04389 Peptidase family M28 IYN96_00135 PF01551 Peptidase family M23 IYN96_00140 PF03572 Peptidase family S41 IYN96_00140 PF13180 PDZ domain IYN96_00145 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IYN96_00145 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IYN96_00160 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) IYN96_00170 PF04055 Radical SAM superfamily IYN96_00185 PF06827 Zinc finger found in FPG and IleRS IYN96_00185 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain IYN96_00185 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain IYN96_00205 PF04349 Periplasmic glucan biosynthesis protein, MdoG IYN96_00215 PF00265 Thymidine kinase IYN96_00220 PF00580 UvrD/REP helicase N-terminal domain IYN96_00220 PF13361 UvrD-like helicase C-terminal domain IYN96_00240 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) IYN96_00245 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family IYN96_00250 PF04820 Tryptophan halogenase IYN96_00265 PF00356 Bacterial regulatory proteins, lacI family IYN96_00275 PF01553 Acyltransferase IYN96_00280 PF00550 Phosphopantetheine attachment site IYN96_00280 PF00698 Acyl transferase domain IYN96_00280 PF08240 Alcohol dehydrogenase GroES-like domain IYN96_00280 PF16197 Ketoacyl-synthetase C-terminal extension IYN96_00280 PF00109 Beta-ketoacyl synthase, N-terminal domain IYN96_00280 PF02801 Beta-ketoacyl synthase, C-terminal domain IYN96_00280 PF08659 KR domain IYN96_00280 PF14765 Polyketide synthase dehydratase IYN96_00315 PF04616 Glycosyl hydrolases family 43 IYN96_00340 PF03422 Carbohydrate binding module (family 6) IYN96_00340 PF00553 Cellulose binding domain IYN96_00340 PF00331 Glycosyl hydrolase family 10 IYN96_00345 PF02614 Glucuronate isomerase IYN96_00370 PF00326 Prolyl oligopeptidase family IYN96_00375 PF02785 Biotin carboxylase C-terminal domain IYN96_00375 PF00289 Biotin carboxylase, N-terminal domain IYN96_00375 PF00364 Biotin-requiring enzyme IYN96_00375 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IYN96_00375 PF18140 Propionyl-coenzyme A carboxylase BT domain IYN96_00380 PF01039 Carboxyl transferase domain IYN96_00385 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IYN96_00385 PF02770 Acyl-CoA dehydrogenase, middle domain IYN96_00385 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IYN96_00435 PF02492 CobW/HypB/UreG, nucleotide-binding domain IYN96_00435 PF07683 Cobalamin synthesis protein cobW C-terminal domain IYN96_00460 PF03969 AFG1-like ATPase IYN96_00465 PF01047 MarR family IYN96_00470 PF02566 OsmC-like protein IYN96_00500 PF00248 Aldo/keto reductase family IYN96_00505 PF00107 Zinc-binding dehydrogenase IYN96_00505 PF16884 N-terminal domain of oxidoreductase IYN96_00510 PF00248 Aldo/keto reductase family IYN96_00520 PF00849 RNA pseudouridylate synthase IYN96_00530 PF04408 Helicase associated domain (HA2) IYN96_00530 PF08482 ATP-dependent helicase C-terminal IYN96_00530 PF00270 DEAD/DEAH box helicase IYN96_00530 PF00271 Helicase conserved C-terminal domain IYN96_00540 PF07308 Protein of unknown function (DUF1456) IYN96_00545 PF13454 FAD-NAD(P)-binding IYN96_00565 PF00266 Aminotransferase class-V IYN96_00570 PF07687 Peptidase dimerisation domain IYN96_00570 PF01546 Peptidase family M20/M25/M40 IYN96_00590 PF00920 Dehydratase family IYN96_00595 PF03692 Putative zinc- or iron-chelating domain IYN96_00600 PF00132 Bacterial transferase hexapeptide (six repeats) IYN96_00605 PF07690 Major Facilitator Superfamily IYN96_00610 PF01966 HD domain IYN96_00610 PF11871 Domain of unknown function (DUF3391) IYN96_00630 PF00171 Aldehyde dehydrogenase family IYN96_00640 PF01494 FAD binding domain IYN96_00660 PF00970 Oxidoreductase FAD-binding domain IYN96_00660 PF00111 2Fe-2S iron-sulfur cluster binding domain IYN96_00665 PF00355 Rieske [2Fe-2S] domain IYN96_00670 PF01144 Coenzyme A transferase IYN96_00675 PF01144 Coenzyme A transferase IYN96_00680 PF00108 Thiolase, N-terminal domain IYN96_00680 PF02803 Thiolase, C-terminal domain IYN96_00685 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal IYN96_00685 PF00775 Dioxygenase IYN96_00700 PF10397 Adenylosuccinate lyase C-terminus IYN96_00700 PF00206 Lyase IYN96_00705 PF12146 Serine aminopeptidase, S33 IYN96_00710 PF02627 Carboxymuconolactone decarboxylase family IYN96_00725 PF01614 Bacterial transcriptional regulator IYN96_00725 PF09339 IclR helix-turn-helix domain IYN96_00735 PF07859 alpha/beta hydrolase fold IYN96_00765 PF03377 TAL effector repeat IYN96_00790 PF01134 Glucose inhibited division protein A IYN96_00790 PF13932 GidA associated domain IYN96_00805 PF00291 Pyridoxal-phosphate dependent enzyme IYN96_00825 PF13649 Methyltransferase domain IYN96_00835 PF12697 Alpha/beta hydrolase family IYN96_00845 PF00155 Aminotransferase class I and II IYN96_00850 PF06968 Biotin and Thiamin Synthesis associated domain IYN96_00850 PF04055 Radical SAM superfamily IYN96_00855 PF00156 Phosphoribosyl transferase domain IYN96_00860 PF01040 UbiA prenyltransferase family IYN96_00885 PF04357 TamB, inner membrane protein subunit of TAM complex IYN96_00890 PF01103 Surface antigen IYN96_00890 PF17243 POTRA domain TamA domain 1 IYN96_00895 PF00593 TonB dependent receptor IYN96_00895 PF07715 TonB-dependent Receptor Plug Domain IYN96_00905 PF13181 Tetratricopeptide repeat IYN96_00910 PF05746 DALR anticodon binding domain IYN96_00910 PF02092 Glycyl-tRNA synthetase beta subunit IYN96_00915 PF02091 Glycyl-tRNA synthetase alpha subunit IYN96_00920 PF00437 Type II/IV secretion system protein IYN96_00920 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain IYN96_00930 PF00117 Glutamine amidotransferase class-I IYN96_00930 PF00958 GMP synthase C terminal domain IYN96_00940 PF00902 Sec-independent protein translocase protein (TatC) IYN96_00945 PF02416 mttA/Hcf106 family IYN96_00950 PF02416 mttA/Hcf106 family IYN96_00960 PF00762 Ferrochelatase IYN96_00965 PF12697 Alpha/beta hydrolase family IYN96_00985 PF04381 Putative exonuclease, RdgC IYN96_00990 PF01171 PP-loop family IYN96_01000 PF00356 Bacterial regulatory proteins, lacI family IYN96_01005 PF07477 Glycosyl hydrolase family 67 C-terminus IYN96_01005 PF03648 Glycosyl hydrolase family 67 N-terminus IYN96_01005 PF07488 Glycosyl hydrolase family 67 middle domain IYN96_01015 PF13378 Enolase C-terminal domain-like IYN96_01015 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IYN96_01020 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain IYN96_01020 PF04616 Glycosyl hydrolases family 43 IYN96_01025 PF07691 PA14 domain IYN96_01025 PF01915 Glycosyl hydrolase family 3 C-terminal domain IYN96_01025 PF14310 Fibronectin type III-like domain IYN96_01025 PF00933 Glycosyl hydrolase family 3 N terminal domain IYN96_01030 PF01232 Mannitol dehydrogenase Rossmann domain IYN96_01030 PF08125 Mannitol dehydrogenase C-terminal domain IYN96_01045 PF05819 NolX protein IYN96_01095 PF01313 Bacterial export proteins, family 3 IYN96_01100 PF00813 FliP family IYN96_01115 PF00771 FHIPEP family IYN96_01120 PF01312 FlhB HrpN YscU SpaS Family IYN96_01135 PF01514 Secretory protein of YscJ/FliF family IYN96_01150 PF18269 T3SS EscN ATPase C-terminal domain IYN96_01150 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IYN96_01150 PF02874 ATP synthase alpha/beta family, beta-barrel domain IYN96_01160 PF01311 Bacterial export proteins, family 1 IYN96_01165 PF00263 Bacterial type II and III secretion system protein IYN96_01165 PF03958 Bacterial type II/III secretion system short domain IYN96_01175 PF01464 Transglycosylase SLT domain IYN96_01195 PF00924 Mechanosensitive ion channel IYN96_01195 PF12795 Mechanosensitive ion channel porin domain IYN96_01195 PF12794 Mechanosensitive ion channel inner membrane domain 1 IYN96_01210 PF03109 ABC1 family IYN96_01215 PF05661 Protein of unknown function (DUF808) IYN96_01220 PF02638 Glycosyl hydrolase-like 10 IYN96_01225 PF00990 Diguanylate cyclase, GGDEF domain IYN96_01230 PF08323 Starch synthase catalytic domain IYN96_01230 PF00534 Glycosyl transferases group 1 IYN96_01235 PF02806 Alpha amylase, C-terminal all-beta domain IYN96_01235 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IYN96_01235 PF00128 Alpha amylase, catalytic domain IYN96_01240 PF00128 Alpha amylase, catalytic domain IYN96_01240 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IYN96_01240 PF11941 Domain of unknown function (DUF3459) IYN96_01245 PF02446 4-alpha-glucanotransferase IYN96_01250 PF00128 Alpha amylase, catalytic domain IYN96_01260 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IYN96_01260 PF00128 Alpha amylase, catalytic domain IYN96_01265 PF13460 NAD(P)H-binding IYN96_01275 PF05598 Transposase domain (DUF772) IYN96_01275 PF01609 Transposase DDE domain IYN96_01280 PF13936 Helix-turn-helix domain IYN96_01280 PF00665 Integrase core domain IYN96_01295 PF05598 Transposase domain (DUF772) IYN96_01295 PF01609 Transposase DDE domain IYN96_01310 PF05598 Transposase domain (DUF772) IYN96_01310 PF01609 Transposase DDE domain IYN96_01330 PF03377 TAL effector repeat IYN96_01350 PF03377 TAL effector repeat IYN96_01375 PF04717 Type VI secretion system, phage-baseplate injector IYN96_01415 PF01026 TatD related DNase IYN96_01435 PF07690 Major Facilitator Superfamily IYN96_01445 PF02146 Sir2 family IYN96_01450 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IYN96_01455 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IYN96_01455 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IYN96_01475 PF00551 Formyl transferase IYN96_01480 PF00072 Response regulator receiver domain IYN96_01480 PF00486 Transcriptional regulatory protein, C terminal IYN96_01500 PF02677 Epoxyqueuosine reductase QueH IYN96_01505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IYN96_01505 PF03466 LysR substrate binding domain IYN96_01510 PF03358 NADPH-dependent FMN reductase IYN96_01520 PF01717 Cobalamin-independent synthase, Catalytic domain IYN96_01520 PF08267 Cobalamin-independent synthase, N-terminal domain IYN96_01530 PF01638 HxlR-like helix-turn-helix IYN96_01535 PF05368 NmrA-like family IYN96_01560 PF00490 Delta-aminolevulinic acid dehydratase IYN96_01575 PF03466 LysR substrate binding domain IYN96_01575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IYN96_01585 PF00175 Oxidoreductase NAD-binding domain IYN96_01585 PF00258 Flavodoxin IYN96_01585 PF00667 FAD binding domain IYN96_01600 PF01488 Shikimate / quinate 5-dehydrogenase IYN96_01600 PF18317 Shikimate 5'-dehydrogenase C-terminal domain IYN96_01600 PF08501 Shikimate dehydrogenase substrate binding domain IYN96_01615 PF13307 Helicase C-terminal domain IYN96_01615 PF06733 DEAD_2 IYN96_01625 PF13533 Biotin-lipoyl like IYN96_01630 PF00199 Catalase IYN96_01630 PF06628 Catalase-related immune-responsive IYN96_01645 PF01207 Dihydrouridine synthase (Dus) IYN96_01655 PF00072 Response regulator receiver domain IYN96_01655 PF00486 Transcriptional regulatory protein, C terminal IYN96_01660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IYN96_01675 PF06167 Glucose-regulated metallo-peptidase M90 IYN96_01685 PF03099 Biotin/lipoate A/B protein ligase family IYN96_01685 PF08279 HTH domain IYN96_01685 PF02237 Biotin protein ligase C terminal domain IYN96_01690 PF03309 Type III pantothenate kinase IYN96_01705 PF02223 Thymidylate kinase IYN96_01725 PF00491 Arginase family IYN96_01745 PF00579 tRNA synthetases class I (W and Y) IYN96_01750 PF00753 Metallo-beta-lactamase superfamily IYN96_01775 PF00892 EamA-like transporter family IYN96_01795 PF00199 Catalase IYN96_01810 PF02789 Cytosol aminopeptidase family, N-terminal domain IYN96_01810 PF00883 Cytosol aminopeptidase family, catalytic domain IYN96_01820 PF01594 AI-2E family transporter IYN96_01845 PF00595 PDZ domain IYN96_01855 PF08521 Two-component sensor kinase N-terminal IYN96_01855 PF00512 His Kinase A (phospho-acceptor) domain IYN96_01855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IYN96_01865 PF08338 Domain of unknown function (DUF1731) IYN96_01865 PF01370 NAD dependent epimerase/dehydratase family IYN96_01895 PF13936 Helix-turn-helix domain IYN96_01895 PF00665 Integrase core domain IYN96_01900 PF00440 Bacterial regulatory proteins, tetR family IYN96_01905 PF00111 2Fe-2S iron-sulfur cluster binding domain IYN96_01905 PF00175 Oxidoreductase NAD-binding domain IYN96_01905 PF00970 Oxidoreductase FAD-binding domain IYN96_01910 PF00487 Fatty acid desaturase IYN96_01915 PF12792 CSS motif domain associated with EAL IYN96_01915 PF00563 EAL domain IYN96_01935 PF01078 Magnesium chelatase, subunit ChlI IYN96_01935 PF13335 Magnesium chelatase, subunit ChlI C-terminal IYN96_01940 PF04380 Membrane fusogenic activity IYN96_01945 PF00543 Nitrogen regulatory protein P-II IYN96_01985 PF04717 Type VI secretion system, phage-baseplate injector IYN96_01995 PF03377 TAL effector repeat IYN96_02020 PF17284 Spermidine synthase tetramerisation domain IYN96_02025 PF17944 Arginine decarboxylase C-terminal helical extension IYN96_02025 PF17810 Arginine decarboxylase helical bundle domain IYN96_02025 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain IYN96_02045 PF01757 Acyltransferase family IYN96_02050 PF00106 short chain dehydrogenase IYN96_02065 PF05746 DALR anticodon binding domain IYN96_02065 PF00750 tRNA synthetases class I (R) IYN96_02065 PF03485 Arginyl tRNA synthetase N terminal domain IYN96_02070 PF04002 RadC-like JAB domain IYN96_02075 PF02441 Flavoprotein IYN96_02075 PF04127 DNA / pantothenate metabolism flavoprotein IYN96_02080 PF00692 dUTPase IYN96_02085 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IYN96_02085 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IYN96_02085 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IYN96_02085 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IYN96_02100 PF00535 Glycosyl transferase family 2 IYN96_02105 PF01370 NAD dependent epimerase/dehydratase family IYN96_02115 PF17762 HTH domain found in ParB protein IYN96_02115 PF02195 ParB-like nuclease domain IYN96_02120 PF13614 AAA domain IYN96_02130 PF00156 Phosphoribosyl transferase domain IYN96_02145 PF01259 SAICAR synthetase IYN96_02150 PF05099 Tellurite resistance protein TerB IYN96_02150 PF00226 DnaJ domain IYN96_02155 PF00834 Ribulose-phosphate 3 epimerase family IYN96_02160 PF00583 Acetyltransferase (GNAT) family IYN96_02165 PF00781 Diacylglycerol kinase catalytic domain IYN96_02170 PF04715 Anthranilate synthase component I, N terminal region IYN96_02170 PF00425 chorismate binding enzyme IYN96_02185 PF00117 Glutamine amidotransferase class-I IYN96_02195 PF02885 Glycosyl transferase family, helical bundle domain IYN96_02195 PF00591 Glycosyl transferase family, a/b domain IYN96_02200 PF00218 Indole-3-glycerol phosphate synthase IYN96_02210 PF00027 Cyclic nucleotide-binding domain IYN96_02210 PF00325 Bacterial regulatory proteins, crp family IYN96_02215 PF02675 S-adenosylmethionine decarboxylase IYN96_02220 PF00893 Small Multidrug Resistance protein IYN96_02225 PF03232 Ubiquinone biosynthesis protein COQ7 IYN96_02230 PF00572 Ribosomal protein L13 IYN96_02235 PF00380 Ribosomal protein S9/S16 IYN96_02250 PF00293 NUDIX domain IYN96_02260 PF00210 Ferritin-like domain IYN96_02265 PF00672 HAMP domain IYN96_02265 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IYN96_02265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IYN96_02265 PF01627 Hpt domain IYN96_02265 PF00512 His Kinase A (phospho-acceptor) domain IYN96_02265 PF00072 Response regulator receiver domain IYN96_02290 PF01521 Iron-sulphur cluster biosynthesis IYN96_02300 PF00293 NUDIX domain IYN96_02300 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain IYN96_02300 PF09297 NADH pyrophosphatase zinc ribbon domain IYN96_02305 PF17113 Regulatory signalling modulator protein AmpE IYN96_02305 PF03186 CobD/Cbib protein IYN96_02320 PF07690 Major Facilitator Superfamily IYN96_02335 PF12805 FUSC-like inner membrane protein yccS IYN96_02345 PF12704 MacB-like periplasmic core domain IYN96_02345 PF00005 ABC transporter IYN96_02345 PF02687 FtsX-like permease family IYN96_02350 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain IYN96_02350 PF02843 Phosphoribosylglycinamide synthetase, C domain IYN96_02350 PF02844 Phosphoribosylglycinamide synthetase, N domain IYN96_02355 PF01808 AICARFT/IMPCHase bienzyme IYN96_02355 PF02142 MGS-like domain IYN96_02385 PF02954 Bacterial regulatory protein, Fis family IYN96_02395 PF01381 Helix-turn-helix IYN96_02425 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IYN96_02425 PF00289 Biotin carboxylase, N-terminal domain IYN96_02425 PF02785 Biotin carboxylase C-terminal domain IYN96_02435 PF00364 Biotin-requiring enzyme IYN96_02440 PF01220 Dehydroquinase class II IYN96_02450 PF02683 Cytochrome C biogenesis protein transmembrane region IYN96_02450 PF11412 Disulphide bond corrector protein DsbC IYN96_02455 PF03091 CutA1 divalent ion tolerance protein IYN96_02460 PF00270 DEAD/DEAH box helicase IYN96_02460 PF00271 Helicase conserved C-terminal domain IYN96_02460 PF17764 3′ DNA-binding domain (3′BD) IYN96_02460 PF18074 Primosomal protein N C-terminal domain IYN96_02460 PF18319 PriA DNA helicase Cys-rich region (CRR) domain IYN96_02480 PF01554 MatE IYN96_02485 PF01343 Peptidase family S49 IYN96_02510 PF01300 Telomere recombination IYN96_02515 PF13368 Topoisomerase C-terminal repeat IYN96_02515 PF01131 DNA topoisomerase IYN96_02515 PF01751 Toprim domain IYN96_02525 PF07963 Prokaryotic N-terminal methylation motif IYN96_02525 PF00114 Pilin (bacterial filament) IYN96_02530 PF04361 Protein of unknown function (DUF494) IYN96_02535 PF02481 DNA recombination-mediator protein A IYN96_02535 PF17782 DprA winged helix domain IYN96_02540 PF01476 LysM domain IYN96_02545 PF01327 Polypeptide deformylase IYN96_02550 PF02911 Formyl transferase, C-terminal domain IYN96_02550 PF00551 Formyl transferase IYN96_02555 PF01029 NusB family IYN96_02555 PF01189 16S rRNA methyltransferase RsmB/F IYN96_02570 PF00535 Glycosyl transferase family 2 IYN96_02590 PF00925 GTP cyclohydrolase II IYN96_02600 PF03279 Bacterial lipid A biosynthesis acyltransferase IYN96_02605 PF02580 D-Tyr-tRNA(Tyr) deacylase IYN96_02610 PF04546 Sigma-70, non-essential region IYN96_02610 PF03979 Sigma-70 factor, region 1.1 IYN96_02610 PF00140 Sigma-70 factor, region 1.2 IYN96_02610 PF04542 Sigma-70 region 2 IYN96_02610 PF04539 Sigma-70 region 3 IYN96_02610 PF04545 Sigma-70, region 4 IYN96_02625 PF00589 Phage integrase family IYN96_02660 PF04610 TrbL/VirB6 plasmid conjugal transfer protein IYN96_02685 PF02384 N-6 DNA Methylase IYN96_02715 PF00326 Prolyl oligopeptidase family IYN96_02715 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region IYN96_02720 PF00043 Glutathione S-transferase, C-terminal domain IYN96_02720 PF02798 Glutathione S-transferase, N-terminal domain IYN96_02755 PF00005 ABC transporter IYN96_02765 PF01381 Helix-turn-helix IYN96_02775 PF02583 Metal-sensitive transcriptional repressor IYN96_02785 PF01383 CpcD/allophycocyanin linker domain IYN96_02785 PF00175 Oxidoreductase NAD-binding domain IYN96_02790 PF00005 ABC transporter IYN96_02795 PF01061 ABC-2 type transporter IYN96_02805 PF08546 Ketopantoate reductase PanE/ApbA C terminal IYN96_02805 PF02558 Ketopantoate reductase PanE/ApbA IYN96_02825 PF05598 Transposase domain (DUF772) IYN96_02825 PF01609 Transposase DDE domain IYN96_02835 PF13406 Transglycosylase SLT domain IYN96_02855 PF13936 Helix-turn-helix domain IYN96_02855 PF00665 Integrase core domain IYN96_02870 PF01609 Transposase DDE domain IYN96_02870 PF05598 Transposase domain (DUF772) IYN96_02955 PF04264 YceI-like domain IYN96_02960 PF00881 Nitroreductase family IYN96_02985 PF02592 Putative vitamin uptake transporter IYN96_02990 PF08335 GlnD PII-uridylyltransferase IYN96_02990 PF03710 Glutamate-ammonia ligase adenylyltransferase IYN96_03020 PF03377 TAL effector repeat IYN96_03025 PF00005 ABC transporter IYN96_03040 PF07715 TonB-dependent Receptor Plug Domain IYN96_03040 PF00593 TonB dependent receptor IYN96_03085 PF00107 Zinc-binding dehydrogenase IYN96_03085 PF08240 Alcohol dehydrogenase GroES-like domain IYN96_03085 PF13823 Alcohol dehydrogenase GroES-associated IYN96_03115 PF02322 Cytochrome bd terminal oxidase subunit II IYN96_03120 PF01654 Cytochrome bd terminal oxidase subunit I IYN96_03130 PF00072 Response regulator receiver domain IYN96_03130 PF00158 Sigma-54 interaction domain IYN96_03130 PF02954 Bacterial regulatory protein, Fis family IYN96_03155 PF02743 Cache domain IYN96_03155 PF00672 HAMP domain IYN96_03155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IYN96_03155 PF06580 Histidine kinase IYN96_03160 PF04397 LytTr DNA-binding domain IYN96_03160 PF00072 Response regulator receiver domain IYN96_03170 PF13520 Amino acid permease IYN96_03190 PF05649 Peptidase family M13 IYN96_03190 PF01431 Peptidase family M13 IYN96_03200 PF00248 Aldo/keto reductase family IYN96_03215 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase IYN96_03225 PF03167 Uracil DNA glycosylase superfamily IYN96_03235 PF02469 Fasciclin domain IYN96_03240 PF00999 Sodium/hydrogen exchanger family IYN96_03245 PF00005 ABC transporter IYN96_03250 PF01061 ABC-2 type transporter IYN96_03265 PF00082 Subtilase family IYN96_03265 PF04151 Bacterial pre-peptidase C-terminal domain IYN96_03275 PF00072 Response regulator receiver domain IYN96_03275 PF13188 PAS domain IYN96_03275 PF08448 PAS fold IYN96_03275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IYN96_03275 PF00512 His Kinase A (phospho-acceptor) domain IYN96_03280 PF00072 Response regulator receiver domain IYN96_03280 PF00486 Transcriptional regulatory protein, C terminal IYN96_03300 PF13677 Membrane MotB of proton-channel complex MotA/MotB IYN96_03300 PF00691 OmpA family IYN96_03305 PF01618 MotA/TolQ/ExbB proton channel family IYN96_03315 PF01641 SelR domain IYN96_03325 PF01037 Lrp/AsnC ligand binding domain IYN96_03330 PF01266 FAD dependent oxidoreductase IYN96_03335 PF00842 Alanine racemase, C-terminal domain IYN96_03335 PF01168 Alanine racemase, N-terminal domain IYN96_03355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IYN96_03355 PF00989 PAS fold IYN96_03355 PF00512 His Kinase A (phospho-acceptor) domain IYN96_03370 PF07995 Glucose / Sorbosone dehydrogenase IYN96_03390 PF05175 Methyltransferase small domain IYN96_03390 PF08468 Methyltransferase small domain N-terminal IYN96_03395 PF00849 RNA pseudouridylate synthase IYN96_03395 PF01479 S4 domain IYN96_03400 PF13419 Haloacid dehalogenase-like hydrolase IYN96_03430 PF04461 Protein of unknown function (DUF520) IYN96_03435 PF00892 EamA-like transporter family IYN96_03440 PF09383 NIL domain IYN96_03440 PF00005 ABC transporter IYN96_03445 PF00528 Binding-protein-dependent transport system inner membrane component IYN96_03450 PF03180 NLPA lipoprotein IYN96_03480 PF02817 e3 binding domain IYN96_03480 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IYN96_03480 PF00364 Biotin-requiring enzyme IYN96_03490 PF07992 Pyridine nucleotide-disulphide oxidoreductase IYN96_03490 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IYN96_03510 PF00119 ATP synthase A chain IYN96_03515 PF00137 ATP synthase subunit C IYN96_03520 PF00430 ATP synthase B/B' CF(0) IYN96_03525 PF00213 ATP synthase delta (OSCP) subunit IYN96_03530 PF00306 ATP synthase alpha/beta chain, C terminal domain IYN96_03530 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IYN96_03530 PF02874 ATP synthase alpha/beta family, beta-barrel domain IYN96_03535 PF00231 ATP synthase IYN96_03540 PF02874 ATP synthase alpha/beta family, beta-barrel domain IYN96_03540 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IYN96_03545 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain IYN96_03550 PF01817 Chorismate mutase type II IYN96_03560 PF12804 MobA-like NTP transferase domain IYN96_03560 PF00132 Bacterial transferase hexapeptide (six repeats) IYN96_03560 PF14602 Hexapeptide repeat of succinyl-transferase IYN96_03565 PF00512 His Kinase A (phospho-acceptor) domain IYN96_03565 PF00989 PAS fold IYN96_03565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IYN96_03570 PF00072 Response regulator receiver domain IYN96_03570 PF00158 Sigma-54 interaction domain IYN96_03570 PF02954 Bacterial regulatory protein, Fis family IYN96_03575 PF12704 MacB-like periplasmic core domain IYN96_03575 PF00005 ABC transporter IYN96_03575 PF02687 FtsX-like permease family IYN96_03580 PF00005 ABC transporter IYN96_03580 PF02687 FtsX-like permease family IYN96_03580 PF12704 MacB-like periplasmic core domain IYN96_03585 PF12704 MacB-like periplasmic core domain IYN96_03585 PF00005 ABC transporter IYN96_03585 PF02687 FtsX-like permease family IYN96_03595 PF00005 ABC transporter IYN96_03600 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IYN96_03605 PF01380 SIS domain IYN96_03630 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IYN96_03640 PF00394 Multicopper oxidase IYN96_03640 PF07731 Multicopper oxidase IYN96_03640 PF07732 Multicopper oxidase IYN96_03655 PF01432 Peptidase family M3 IYN96_03665 PF00109 Beta-ketoacyl synthase, N-terminal domain IYN96_03665 PF02801 Beta-ketoacyl synthase, C-terminal domain IYN96_03670 PF07977 FabA-like domain IYN96_03675 PF11799 impB/mucB/samB family C-terminal domain IYN96_03675 PF00817 impB/mucB/samB family IYN96_03680 PF13419 Haloacid dehalogenase-like hydrolase IYN96_03690 PF13185 GAF domain IYN96_03705 PF01242 6-pyruvoyl tetrahydropterin synthase IYN96_03710 PF00271 Helicase conserved C-terminal domain IYN96_03710 PF00270 DEAD/DEAH box helicase IYN96_03720 PF02798 Glutathione S-transferase, N-terminal domain IYN96_03720 PF14497 Glutathione S-transferase, C-terminal domain IYN96_03725 PF00437 Type II/IV secretion system protein IYN96_03745 PF00571 CBS domain IYN96_03745 PF00291 Pyridoxal-phosphate dependent enzyme IYN96_03750 PF01053 Cys/Met metabolism PLP-dependent enzyme IYN96_03760 PF00005 ABC transporter IYN96_03765 PF00132 Bacterial transferase hexapeptide (six repeats) IYN96_03770 PF00535 Glycosyl transferase family 2 IYN96_03775 PF05045 Rhamnan synthesis protein F IYN96_03775 PF14307 Glycosyltransferase WbsX IYN96_03785 PF01209 ubiE/COQ5 methyltransferase family IYN96_03800 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IYN96_03800 PF07992 Pyridine nucleotide-disulphide oxidoreductase IYN96_03805 PF01370 NAD dependent epimerase/dehydratase family IYN96_03815 PF00106 short chain dehydrogenase IYN96_03820 PF01565 FAD binding domain IYN96_03820 PF04030 D-arabinono-1,4-lactone oxidase IYN96_03825 PF01040 UbiA prenyltransferase family IYN96_03835 PF00766 Electron transfer flavoprotein FAD-binding domain IYN96_03835 PF01012 Electron transfer flavoprotein domain IYN96_03840 PF01012 Electron transfer flavoprotein domain IYN96_03845 PF16363 GDP-mannose 4,6 dehydratase IYN96_03850 PF00483 Nucleotidyl transferase IYN96_03855 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase IYN96_03860 PF04321 RmlD substrate binding domain IYN96_03865 PF00483 Nucleotidyl transferase IYN96_03865 PF01050 Mannose-6-phosphate isomerase IYN96_03870 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IYN96_03870 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IYN96_03870 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IYN96_03870 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IYN96_03875 PF01144 Coenzyme A transferase IYN96_03880 PF01144 Coenzyme A transferase IYN96_03885 PF14307 Glycosyltransferase WbsX IYN96_03885 PF05045 Rhamnan synthesis protein F IYN96_03905 PF02470 MlaD protein IYN96_03905 PF03886 ABC-type transport auxiliary lipoprotein component IYN96_03910 PF00005 ABC transporter IYN96_03915 PF02405 Permease MlaE IYN96_03925 PF00816 H-NS histone family IYN96_03930 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IYN96_03930 PF04073 Aminoacyl-tRNA editing domain IYN96_03930 PF03129 Anticodon binding domain IYN96_03940 PF01066 CDP-alcohol phosphatidyltransferase IYN96_03955 PF00544 Pectate lyase IYN96_03960 PF01464 Transglycosylase SLT domain IYN96_03960 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain IYN96_03970 PF08264 Anticodon-binding domain of tRNA IYN96_03970 PF10458 Valyl tRNA synthetase tRNA binding arm IYN96_03970 PF00133 tRNA synthetases class I (I, L, M and V) IYN96_03985 PF00883 Cytosol aminopeptidase family, catalytic domain IYN96_03985 PF02789 Cytosol aminopeptidase family, N-terminal domain IYN96_03995 PF03739 Lipopolysaccharide export system permease LptF/LptG IYN96_04010 PF02899 Phage integrase, N-terminal SAM-like domain IYN96_04010 PF00589 Phage integrase family IYN96_04015 PF13098 Thioredoxin-like domain IYN96_04015 PF10411 Disulfide bond isomerase protein N-terminus IYN96_04020 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain IYN96_04020 PF02769 AIR synthase related protein, C-terminal domain IYN96_04020 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal IYN96_04025 PF13018 Extended Signal Peptide of Type V secretion system IYN96_04025 PF05658 Head domain of trimeric autotransporter adhesin IYN96_04025 PF05662 Coiled stalk of trimeric autotransporter adhesin IYN96_04025 PF03895 YadA-like membrane anchor domain IYN96_04030 PF04151 Bacterial pre-peptidase C-terminal domain IYN96_04030 PF00082 Subtilase family IYN96_04035 PF00437 Type II/IV secretion system protein IYN96_04035 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain IYN96_04045 PF00482 Type II secretion system (T2SS), protein F IYN96_04050 PF08334 Type II secretion system (T2SS), protein G IYN96_04055 PF12019 Type II transport protein GspH IYN96_04060 PF07963 Prokaryotic N-terminal methylation motif IYN96_04070 PF03934 Type II secretion system (T2SS), protein K IYN96_04075 PF05137 Fimbrial assembly protein (PilN) IYN96_04080 PF10741 Type II secretion system (T2SS), protein M subtype b IYN96_04090 PF00263 Bacterial type II and III secretion system protein IYN96_04090 PF03958 Bacterial type II/III secretion system short domain IYN96_04105 PF07702 UTRA domain IYN96_04105 PF00392 Bacterial regulatory proteins, gntR family IYN96_04115 PF07715 TonB-dependent Receptor Plug Domain IYN96_04115 PF00593 TonB dependent receptor IYN96_04155 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family IYN96_04155 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain IYN96_04170 PF03960 ArsC family IYN96_04175 PF01327 Polypeptide deformylase IYN96_04210 PF01979 Amidohydrolase family IYN96_04215 PF01979 Amidohydrolase family IYN96_04235 PF00462 Glutaredoxin IYN96_04240 PF01522 Polysaccharide deacetylase IYN96_04260 PF00155 Aminotransferase class I and II IYN96_04265 PF03193 RsgA GTPase IYN96_04280 PF00128 Alpha amylase, catalytic domain IYN96_04300 PF00356 Bacterial regulatory proteins, lacI family IYN96_04305 PF00106 short chain dehydrogenase IYN96_04310 PF03600 Citrate transporter IYN96_04320 PF00072 Response regulator receiver domain IYN96_04320 PF00486 Transcriptional regulatory protein, C terminal IYN96_04325 PF08521 Two-component sensor kinase N-terminal IYN96_04325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IYN96_04325 PF00512 His Kinase A (phospho-acceptor) domain IYN96_04335 PF00196 Bacterial regulatory proteins, luxR family IYN96_04335 PF00072 Response regulator receiver domain IYN96_04350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IYN96_04350 PF03466 LysR substrate binding domain IYN96_04360 PF07690 Major Facilitator Superfamily IYN96_04365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IYN96_04365 PF00512 His Kinase A (phospho-acceptor) domain IYN96_04380 PF00375 Sodium:dicarboxylate symporter family IYN96_04385 PF01515 Phosphate acetyl/butaryl transferase IYN96_04385 PF00390 Malic enzyme, N-terminal domain IYN96_04385 PF03949 Malic enzyme, NAD binding domain IYN96_04410 PF03279 Bacterial lipid A biosynthesis acyltransferase IYN96_04415 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) IYN96_04420 PF05598 Transposase domain (DUF772) IYN96_04420 PF01609 Transposase DDE domain IYN96_04425 PF02321 Outer membrane efflux protein IYN96_04445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IYN96_04450 PF00330 Aconitase family (aconitate hydratase) IYN96_04455 PF00694 Aconitase C-terminal domain IYN96_04460 PF08241 Methyltransferase domain IYN96_04465 PF00180 Isocitrate/isopropylmalate dehydrogenase IYN96_04470 PF00682 HMGL-like IYN96_04470 PF08502 LeuA allosteric (dimerisation) domain IYN96_04475 PF00291 Pyridoxal-phosphate dependent enzyme IYN96_04485 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IYN96_04485 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IYN96_04485 PF00205 Thiamine pyrophosphate enzyme, central domain IYN96_04490 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain IYN96_04490 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain IYN96_04505 PF18500 CadC C-terminal domain 1 IYN96_04505 PF00486 Transcriptional regulatory protein, C terminal IYN96_04510 PF12833 Helix-turn-helix domain IYN96_04515 PF07715 TonB-dependent Receptor Plug Domain IYN96_04515 PF00593 TonB dependent receptor IYN96_04530 PF00719 Inorganic pyrophosphatase IYN96_04540 PF03030 Inorganic H+ pyrophosphatase IYN96_04565 PF00365 Phosphofructokinase IYN96_04575 PF02875 Mur ligase family, glutamate ligase domain IYN96_04575 PF08245 Mur ligase middle domain IYN96_04575 PF01225 Mur ligase family, catalytic domain IYN96_04585 PF01062 Bestrophin, RFP-TM, chloride channel IYN96_04625 PF00520 Ion transport protein IYN96_04625 PF00027 Cyclic nucleotide-binding domain IYN96_04630 PF00202 Aminotransferase class-III IYN96_04655 PF01593 Flavin containing amine oxidoreductase IYN96_04660 PF00034 Cytochrome c IYN96_04660 PF13442 Cytochrome C oxidase, cbb3-type, subunit III IYN96_04675 PF00127 Copper binding proteins, plastocyanin/azurin family IYN96_04685 PF00202 Aminotransferase class-III IYN96_04695 PF02581 Thiamine monophosphate synthase IYN96_04700 PF00301 Rubredoxin IYN96_04705 PF13369 Transglutaminase-like superfamily IYN96_04715 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) IYN96_04725 PF01812 5-formyltetrahydrofolate cyclo-ligase family IYN96_04735 PF05164 Cell division protein ZapA IYN96_04750 PF05195 Aminopeptidase P, N-terminal domain IYN96_04750 PF00557 Metallopeptidase family M24 IYN96_04770 PF00557 Metallopeptidase family M24 IYN96_04785 PF06969 HemN C-terminal domain IYN96_04785 PF04055 Radical SAM superfamily IYN96_04790 PF01725 Ham1 family IYN96_04795 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IYN96_04800 PF01138 3' exoribonuclease family, domain 1 IYN96_04800 PF03725 3' exoribonuclease family, domain 2 IYN96_04805 PF08340 Domain of unknown function (DUF1732) IYN96_04805 PF03755 YicC-like family, N-terminal region IYN96_04810 PF00625 Guanylate kinase IYN96_04820 PF01192 RNA polymerase Rpb6 IYN96_04825 PF13291 ACT domain IYN96_04825 PF04607 Region found in RelA / SpoT proteins IYN96_04825 PF02824 TGS domain IYN96_04830 PF01042 Endoribonuclease L-PSP IYN96_04835 PF00271 Helicase conserved C-terminal domain IYN96_04835 PF17191 RecG wedge domain IYN96_04835 PF00270 DEAD/DEAH box helicase IYN96_04840 PF01156 Inosine-uridine preferring nucleoside hydrolase IYN96_04845 PF01197 Ribosomal protein L31 IYN96_04850 PF00285 Citrate synthase, C-terminal domain IYN96_04865 PF00905 Penicillin binding protein transpeptidase domain IYN96_04865 PF00912 Transglycosylase IYN96_04865 PF17092 Penicillin-binding protein OB-like domain IYN96_04870 PF11104 Type IV pilus assembly protein PilM; IYN96_04875 PF05137 Fimbrial assembly protein (PilN) IYN96_04880 PF04350 Pilus assembly protein, PilO IYN96_04885 PF04351 Pilus assembly protein, PilP IYN96_04890 PF11741 AMIN domain IYN96_04890 PF00263 Bacterial type II and III secretion system protein IYN96_04890 PF03958 Bacterial type II/III secretion system short domain IYN96_04890 PF07660 Secretin and TonB N terminus short domain IYN96_04900 PF07726 ATPase family associated with various cellular activities (AAA) IYN96_04900 PF17863 AAA lid domain IYN96_04920 PF07584 Aerotolerance regulator N-terminal IYN96_04920 PF00092 von Willebrand factor type A domain IYN96_04955 PF00456 Transketolase, thiamine diphosphate binding domain IYN96_04955 PF02780 Transketolase, C-terminal domain IYN96_04955 PF02779 Transketolase, pyrimidine binding domain IYN96_05055 PF00005 ABC transporter IYN96_05055 PF03459 TOBE domain IYN96_05060 PF00528 Binding-protein-dependent transport system inner membrane component IYN96_05070 PF00753 Metallo-beta-lactamase superfamily IYN96_05070 PF04273 Putative phosphatase (DUF442) IYN96_05080 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IYN96_05080 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IYN96_05095 PF00162 Phosphoglycerate kinase IYN96_05100 PF13419 Haloacid dehalogenase-like hydrolase IYN96_05105 PF00224 Pyruvate kinase, barrel domain IYN96_05105 PF02887 Pyruvate kinase, alpha/beta domain IYN96_05110 PF00274 Fructose-bisphosphate aldolase class-I IYN96_05115 PF01661 Macro domain IYN96_05125 PF00291 Pyridoxal-phosphate dependent enzyme IYN96_05130 PF10414 Sirohaem synthase dimerisation region IYN96_05130 PF14824 Sirohaem biosynthesis protein central IYN96_05130 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IYN96_05135 PF03466 LysR substrate binding domain IYN96_05135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IYN96_05155 PF00672 HAMP domain IYN96_05155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IYN96_05155 PF00512 His Kinase A (phospho-acceptor) domain IYN96_05155 PF01627 Hpt domain IYN96_05155 PF00072 Response regulator receiver domain IYN96_05175 PF01507 Phosphoadenosine phosphosulfate reductase family IYN96_05180 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IYN96_05180 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IYN96_05185 PF00175 Oxidoreductase NAD-binding domain IYN96_05185 PF00667 FAD binding domain IYN96_05185 PF00258 Flavodoxin IYN96_05190 PF01507 Phosphoadenosine phosphosulfate reductase family IYN96_05195 PF00009 Elongation factor Tu GTP binding domain IYN96_05200 PF00529 HlyD membrane-fusion protein of T1SS IYN96_05200 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IYN96_05205 PF00873 AcrB/AcrD/AcrF family IYN96_05210 PF11838 ERAP1-like C-terminal domain IYN96_05210 PF01433 Peptidase family M1 domain IYN96_05235 PF00588 SpoU rRNA Methylase family IYN96_05235 PF08032 RNA 2'-O ribose methyltransferase substrate binding IYN96_05260 PF01741 Large-conductance mechanosensitive channel, MscL IYN96_05265 PF01557 Fumarylacetoacetate (FAA) hydrolase family IYN96_05285 PF03600 Citrate transporter IYN96_05285 PF02080 TrkA-C domain IYN96_05290 PF02390 Putative methyltransferase IYN96_05295 PF05690 Thiazole biosynthesis protein ThiG IYN96_05305 PF00657 GDSL-like Lipase/Acylhydrolase IYN96_05305 PF03797 Autotransporter beta-domain IYN96_05315 PF05598 Transposase domain (DUF772) IYN96_05315 PF01609 Transposase DDE domain IYN96_05335 PF00709 Adenylosuccinate synthetase IYN96_05345 PF04002 RadC-like JAB domain IYN96_05380 PF01026 TatD related DNase IYN96_05400 PF05598 Transposase domain (DUF772) IYN96_05400 PF01609 Transposase DDE domain IYN96_05440 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IYN96_05440 PF00128 Alpha amylase, catalytic domain IYN96_05445 PF08443 RimK-like ATP-grasp domain IYN96_05445 PF18030 RimK PreATP-grasp domain IYN96_05455 PF00486 Transcriptional regulatory protein, C terminal IYN96_05455 PF00072 Response regulator receiver domain IYN96_05460 PF00989 PAS fold IYN96_05460 PF00512 His Kinase A (phospho-acceptor) domain IYN96_05460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IYN96_05460 PF11808 Phosphate regulon sensor protein PhoR IYN96_05480 PF01121 Dephospho-CoA kinase IYN96_05485 PF01478 Type IV leader peptidase family IYN96_05485 PF06750 Bacterial Peptidase A24 N-terminal domain IYN96_05490 PF00482 Type II secretion system (T2SS), protein F IYN96_05495 PF07963 Prokaryotic N-terminal methylation motif IYN96_05495 PF00114 Pilin (bacterial filament) IYN96_05500 PF00884 Sulfatase IYN96_05500 PF08019 Phosphoethanolamine transferase EptA/EptB IYN96_05515 PF00437 Type II/IV secretion system protein IYN96_05515 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain IYN96_05520 PF02661 Fic/DOC family IYN96_05520 PF17841 BID domain of Bartonella effector protein (Bep) IYN96_05530 PF00158 Sigma-54 interaction domain IYN96_05530 PF00072 Response regulator receiver domain IYN96_05530 PF02954 Bacterial regulatory protein, Fis family IYN96_05535 PF00512 His Kinase A (phospho-acceptor) domain IYN96_05535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IYN96_05540 PF00549 CoA-ligase IYN96_05540 PF08442 ATP-grasp domain IYN96_05545 PF02629 CoA binding domain IYN96_05545 PF00549 CoA-ligase IYN96_05560 PF00795 Carbon-nitrogen hydrolase IYN96_05560 PF02540 NAD synthase IYN96_05565 PF13525 Outer membrane lipoprotein IYN96_05570 PF00849 RNA pseudouridylate synthase IYN96_05575 PF02578 Multi-copper polyphenol oxidoreductase laccase IYN96_05585 PF04134 Protein of unknown function, DUF393 IYN96_05590 PF02203 Tar ligand binding domain homologue IYN96_05590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IYN96_05590 PF00672 HAMP domain IYN96_05595 PF01011 PQQ enzyme repeat IYN96_05600 PF00982 Glycosyltransferase family 20 IYN96_05605 PF00723 Glycosyl hydrolases family 15 IYN96_05610 PF02358 Trehalose-phosphatase IYN96_05620 PF07715 TonB-dependent Receptor Plug Domain IYN96_05620 PF00593 TonB dependent receptor IYN96_05650 PF04377 Arginine-tRNA-protein transferase, C terminus IYN96_05650 PF04376 Arginine-tRNA-protein transferase, N terminus IYN96_05665 PF04542 Sigma-70 region 2 IYN96_05665 PF08281 Sigma-70, region 4 IYN96_05680 PF00378 Enoyl-CoA hydratase/isomerase IYN96_05695 PF00005 ABC transporter IYN96_05695 PF17755 UvrA DNA-binding domain IYN96_05695 PF17760 UvrA interaction domain IYN96_05700 PF00829 Ribosomal prokaryotic L21 protein IYN96_05705 PF01016 Ribosomal L27 protein IYN96_05710 PF01018 GTP1/OBG IYN96_05710 PF01926 50S ribosome-binding GTPase IYN96_05715 PF01649 Ribosomal protein S20 IYN96_05720 PF03023 Lipid II flippase MurJ IYN96_05725 PF06574 FAD synthetase IYN96_05725 PF01687 Riboflavin kinase IYN96_05730 PF00133 tRNA synthetases class I (I, L, M and V) IYN96_05730 PF06827 Zinc finger found in FPG and IleRS IYN96_05730 PF08264 Anticodon-binding domain of tRNA IYN96_05735 PF01252 Signal peptidase (SPase) II IYN96_05740 PF02401 LytB protein IYN96_05750 PF00116 Cytochrome C oxidase subunit II, periplasmic domain IYN96_05750 PF06481 COX Aromatic Rich Motif IYN96_05755 PF00115 Cytochrome C and Quinol oxidase polypeptide I IYN96_05760 PF00510 Cytochrome c oxidase subunit III IYN96_05765 PF03626 Prokaryotic Cytochrome C oxidase subunit IV IYN96_05775 PF06715 Gp5 C-terminal repeat (3 copies) IYN96_05775 PF04717 Type VI secretion system, phage-baseplate injector IYN96_05830 PF00665 Integrase core domain IYN96_05830 PF13936 Helix-turn-helix domain IYN96_05840 PF01609 Transposase DDE domain IYN96_05840 PF05598 Transposase domain (DUF772) IYN96_05855 PF18073 Rubredoxin metal binding domain IYN96_05885 PF12833 Helix-turn-helix domain IYN96_05890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IYN96_05890 PF00183 Hsp90 protein IYN96_05900 PF08678 Rsbr N terminal IYN96_05900 PF01740 STAS domain IYN96_05905 PF01740 STAS domain IYN96_05910 PF13581 Histidine kinase-like ATPase domain IYN96_05920 PF17149 Periplasmic sensor domain found in signal transduction proteins IYN96_05920 PF00672 HAMP domain IYN96_05920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IYN96_05920 PF00512 His Kinase A (phospho-acceptor) domain IYN96_05920 PF01627 Hpt domain IYN96_05920 PF00072 Response regulator receiver domain IYN96_05925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IYN96_05925 PF00512 His Kinase A (phospho-acceptor) domain IYN96_05925 PF08448 PAS fold IYN96_05925 PF13188 PAS domain IYN96_05925 PF00072 Response regulator receiver domain IYN96_05940 PF06964 Alpha-L-arabinofuranosidase C-terminal domain IYN96_05945 PF01263 Aldose 1-epimerase IYN96_05950 PF01578 Cytochrome C assembly protein IYN96_05955 PF00448 SRP54-type protein, GTPase domain IYN96_05955 PF02978 Signal peptide binding domain IYN96_05955 PF02881 SRP54-type protein, helical bundle domain IYN96_05965 PF03060 Nitronate monooxygenase IYN96_05975 PF00886 Ribosomal protein S16 IYN96_05980 PF05239 PRC-barrel domain IYN96_05980 PF01782 RimM N-terminal domain IYN96_05985 PF01746 tRNA (Guanine-1)-methyltransferase IYN96_05990 PF01245 Ribosomal protein L19 IYN96_06000 PF01554 MatE IYN96_06005 PF01479 S4 domain IYN96_06010 PF00141 Peroxidase IYN96_06020 PF01624 MutS domain I IYN96_06020 PF05188 MutS domain II IYN96_06020 PF05192 MutS domain III IYN96_06020 PF05190 MutS family domain IV IYN96_06020 PF00488 MutS domain V IYN96_06030 PF01541 GIY-YIG catalytic domain IYN96_06035 PF17871 AAA lid domain IYN96_06035 PF00004 ATPase family associated with various cellular activities (AAA) IYN96_06035 PF07724 AAA domain (Cdc48 subfamily) IYN96_06035 PF10431 C-terminal, D2-small domain, of ClpB protein IYN96_06035 PF02861 Clp amino terminal domain, pathogenicity island component IYN96_06065 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase IYN96_06070 PF02277 Phosphoribosyltransferase IYN96_06080 PF02654 Cobalamin-5-phosphate synthase IYN96_06090 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain IYN96_06090 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain IYN96_06095 PF06276 Ferric iron reductase FhuF-like transporter IYN96_06095 PF04183 IucA / IucC family IYN96_06100 PF07690 Major Facilitator Superfamily IYN96_06105 PF06276 Ferric iron reductase FhuF-like transporter IYN96_06105 PF04183 IucA / IucC family IYN96_06115 PF07715 TonB-dependent Receptor Plug Domain IYN96_06115 PF07660 Secretin and TonB N terminus short domain IYN96_06115 PF00593 TonB dependent receptor IYN96_06130 PF00999 Sodium/hydrogen exchanger family IYN96_06130 PF02254 TrkA-N domain IYN96_06140 PF07715 TonB-dependent Receptor Plug Domain IYN96_06140 PF00593 TonB dependent receptor IYN96_06145 PF00593 TonB dependent receptor IYN96_06145 PF07715 TonB-dependent Receptor Plug Domain IYN96_06155 PF00593 TonB dependent receptor IYN96_06155 PF07715 TonB-dependent Receptor Plug Domain IYN96_06160 PF00005 ABC transporter IYN96_06160 PF12848 ABC transporter IYN96_06175 PF03466 LysR substrate binding domain IYN96_06175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IYN96_06185 PF13472 GDSL-like Lipase/Acylhydrolase family IYN96_06185 PF07859 alpha/beta hydrolase fold IYN96_06195 PF05506 Domain of unknown function (DUF756) IYN96_06195 PF04185 Phosphoesterase family IYN96_06200 PF07690 Major Facilitator Superfamily IYN96_06215 PF00152 tRNA synthetases class II (D, K and N) IYN96_06215 PF01336 OB-fold nucleic acid binding domain IYN96_06215 PF02938 GAD domain IYN96_06230 PF01709 Transcriptional regulator IYN96_06235 PF02075 Crossover junction endodeoxyribonuclease RuvC IYN96_06240 PF01330 RuvA N terminal domain IYN96_06240 PF07499 RuvA, C-terminal domain IYN96_06245 PF02705 K+ potassium transporter IYN96_06250 PF17864 RuvB AAA lid domain IYN96_06250 PF05491 RuvB C-terminal winged helix domain IYN96_06250 PF05496 Holliday junction DNA helicase RuvB P-loop domain IYN96_06255 PF03061 Thioesterase superfamily IYN96_06260 PF01618 MotA/TolQ/ExbB proton channel family IYN96_06265 PF02472 Biopolymer transport protein ExbD/TolR IYN96_06275 PF04052 TolB amino-terminal domain IYN96_06275 PF07676 WD40-like Beta Propeller Repeat IYN96_06280 PF00691 OmpA family IYN96_06290 PF04055 Radical SAM superfamily IYN96_06300 PF06508 Queuosine biosynthesis protein QueC IYN96_06330 PF00849 RNA pseudouridylate synthase IYN96_06330 PF01479 S4 domain IYN96_06345 PF16124 RecQ zinc-binding IYN96_06345 PF00270 DEAD/DEAH box helicase IYN96_06345 PF00271 Helicase conserved C-terminal domain IYN96_06345 PF00570 HRDC domain IYN96_06345 PF09382 RQC domain IYN96_06350 PF00210 Ferritin-like domain IYN96_06355 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold IYN96_06355 PF00271 Helicase conserved C-terminal domain IYN96_06355 PF00270 DEAD/DEAH box helicase IYN96_06355 PF11898 Domain of unknown function (DUF3418) IYN96_06355 PF04408 Helicase associated domain (HA2) IYN96_06365 PF02685 Glucokinase IYN96_06370 PF02685 Glucokinase IYN96_06390 PF04055 Radical SAM superfamily IYN96_06390 PF13186 Iron-sulfur cluster-binding domain IYN96_06395 PF03070 TENA/THI-4/PQQC family IYN96_06400 PF12706 Beta-lactamase superfamily domain IYN96_06405 PF08042 PqqA family IYN96_06410 PF02824 TGS domain IYN96_06410 PF04607 Region found in RelA / SpoT proteins IYN96_06410 PF13291 ACT domain IYN96_06420 PF00535 Glycosyl transferase family 2 IYN96_06425 PF00912 Transglycosylase IYN96_06425 PF14814 Bifunctional transglycosylase second domain IYN96_06425 PF00905 Penicillin binding protein transpeptidase domain IYN96_06435 PF04851 Type III restriction enzyme, res subunit IYN96_06435 PF13307 Helicase C-terminal domain IYN96_06440 PF00814 Glycoprotease family IYN96_06455 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain IYN96_06455 PF02951 Prokaryotic glutathione synthetase, N-terminal domain IYN96_06460 PF00072 Response regulator receiver domain IYN96_06465 PF00072 Response regulator receiver domain IYN96_06470 PF01584 CheW-like domain IYN96_06475 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term IYN96_06475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IYN96_06480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IYN96_06480 PF01627 Hpt domain IYN96_06480 PF00072 Response regulator receiver domain IYN96_06480 PF02895 Signal transducing histidine kinase, homodimeric domain IYN96_06480 PF01584 CheW-like domain IYN96_06495 PF13302 Acetyltransferase (GNAT) domain IYN96_06505 PF00092 von Willebrand factor type A domain IYN96_06505 PF12450 von Willebrand factor IYN96_06505 PF12034 Domain of unknown function (DUF3520) IYN96_06510 PF01112 Asparaginase IYN96_06515 PF03932 CutC family IYN96_06545 PF01301 Glycosyl hydrolases family 35 IYN96_06555 PF07971 Glycosyl hydrolase family 92 IYN96_06555 PF17678 Glycosyl hydrolase family 92 N-terminal domain IYN96_06570 PF00665 Integrase core domain IYN96_06570 PF13936 Helix-turn-helix domain IYN96_06580 PF00664 ABC transporter transmembrane region IYN96_06580 PF00005 ABC transporter IYN96_06580 PF03412 Peptidase C39 family IYN96_06585 PF07691 PA14 domain IYN96_06585 PF00933 Glycosyl hydrolase family 3 N terminal domain IYN96_06585 PF14310 Fibronectin type III-like domain IYN96_06585 PF01915 Glycosyl hydrolase family 3 C-terminal domain IYN96_06595 PF07691 PA14 domain IYN96_06595 PF02838 Glycosyl hydrolase family 20, domain 2 IYN96_06595 PF00728 Glycosyl hydrolase family 20, catalytic domain IYN96_06600 PF01476 LysM domain IYN96_06600 PF00704 Glycosyl hydrolases family 18 IYN96_06615 PF02685 Glucokinase IYN96_06620 PF04452 RNA methyltransferase IYN96_06625 PF00202 Aminotransferase class-III IYN96_06630 PF00293 NUDIX domain IYN96_06635 PF00459 Inositol monophosphatase family IYN96_06640 PF03819 MazG nucleotide pyrophosphohydrolase domain IYN96_06645 PF02694 Uncharacterised BCR, YnfA/UPF0060 family IYN96_06655 PF01145 SPFH domain / Band 7 family IYN96_06655 PF16200 C-terminal region of band_7 IYN96_06665 PF01571 Aminomethyltransferase folate-binding domain IYN96_06665 PF08669 Glycine cleavage T-protein C-terminal barrel domain IYN96_06670 PF01597 Glycine cleavage H-protein IYN96_06685 PF01609 Transposase DDE domain IYN96_06685 PF05598 Transposase domain (DUF772) IYN96_06700 PF05598 Transposase domain (DUF772) IYN96_06700 PF01609 Transposase DDE domain IYN96_06715 PF09317 Domain of unknown function (DUF1974) IYN96_06715 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IYN96_06715 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IYN96_06725 PF00440 Bacterial regulatory proteins, tetR family IYN96_06730 PF07715 TonB-dependent Receptor Plug Domain IYN96_06730 PF00593 TonB dependent receptor IYN96_06740 PF01430 Hsp33 protein IYN96_06745 PF00912 Transglycosylase IYN96_06750 PF00535 Glycosyl transferase family 2 IYN96_06755 PF00478 IMP dehydrogenase / GMP reductase domain IYN96_06755 PF00571 CBS domain IYN96_06765 PF03006 Haemolysin-III related IYN96_06770 PF16658 Class II release factor RF3, C-terminal domain IYN96_06770 PF00009 Elongation factor Tu GTP binding domain IYN96_06775 PF01551 Peptidase family M23 IYN96_06775 PF08525 Opacity-associated protein A N-terminal motif IYN96_06775 PF01476 LysM domain IYN96_06780 PF00561 alpha/beta hydrolase fold IYN96_06785 PF01053 Cys/Met metabolism PLP-dependent enzyme IYN96_06795 PF03313 Serine dehydratase alpha chain IYN96_06795 PF03315 Serine dehydratase beta chain IYN96_06820 PF04264 YceI-like domain IYN96_06825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IYN96_06825 PF01627 Hpt domain IYN96_06825 PF00512 His Kinase A (phospho-acceptor) domain IYN96_06825 PF00072 Response regulator receiver domain IYN96_06830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IYN96_06830 PF00512 His Kinase A (phospho-acceptor) domain IYN96_06830 PF09308 LuxQ, periplasmic IYN96_06830 PF00072 Response regulator receiver domain IYN96_06835 PF00072 Response regulator receiver domain IYN96_06835 PF01627 Hpt domain IYN96_06835 PF00512 His Kinase A (phospho-acceptor) domain IYN96_06835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IYN96_06835 PF00672 HAMP domain IYN96_06835 PF17149 Periplasmic sensor domain found in signal transduction proteins IYN96_06845 PF01627 Hpt domain IYN96_06845 PF00072 Response regulator receiver domain IYN96_06845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IYN96_06845 PF17149 Periplasmic sensor domain found in signal transduction proteins IYN96_06845 PF00672 HAMP domain IYN96_06845 PF00512 His Kinase A (phospho-acceptor) domain IYN96_06870 PF07745 Glycosyl hydrolase family 53 IYN96_06880 PF01381 Helix-turn-helix IYN96_06880 PF09856 Predicted transcriptional regulator (DUF2083) IYN96_06880 PF06114 IrrE N-terminal-like domain IYN96_06885 PF00171 Aldehyde dehydrogenase family IYN96_06890 PF02770 Acyl-CoA dehydrogenase, middle domain IYN96_06890 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IYN96_06890 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IYN96_06895 PF00378 Enoyl-CoA hydratase/isomerase IYN96_06900 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IYN96_06900 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IYN96_06900 PF00378 Enoyl-CoA hydratase/isomerase IYN96_06905 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IYN96_06905 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IYN96_06910 PF01545 Cation efflux family IYN96_06915 PF00378 Enoyl-CoA hydratase/isomerase IYN96_06915 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IYN96_06915 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IYN96_06920 PF08281 Sigma-70, region 4 IYN96_06920 PF04542 Sigma-70 region 2 IYN96_06930 PF13180 PDZ domain IYN96_06935 PF06421 GTP-binding protein LepA C-terminus IYN96_06935 PF03144 Elongation factor Tu domain 2 IYN96_06935 PF00009 Elongation factor Tu GTP binding domain IYN96_06935 PF00679 Elongation factor G C-terminus IYN96_06940 PF10502 Signal peptidase, peptidase S26 IYN96_06950 PF14622 Ribonuclease-III-like IYN96_06950 PF00035 Double-stranded RNA binding motif IYN96_06955 PF07650 KH domain IYN96_06955 PF01926 50S ribosome-binding GTPase IYN96_06960 PF11967 Recombination protein O N terminal IYN96_06960 PF02565 Recombination protein O C terminal IYN96_06970 PF05958 tRNA (Uracil-5-)-methyltransferase IYN96_06975 PF01928 CYTH domain IYN96_06980 PF01323 DSBA-like thioredoxin domain IYN96_06985 PF01593 Flavin containing amine oxidoreductase IYN96_06990 PF04244 Deoxyribodipyrimidine photo-lyase-related protein IYN96_06995 PF00933 Glycosyl hydrolase family 3 N terminal domain IYN96_07000 PF00156 Phosphoribosyl transferase domain IYN96_07005 PF01048 Phosphorylase superfamily IYN96_07010 PF00313 'Cold-shock' DNA-binding domain IYN96_07030 PF00270 DEAD/DEAH box helicase IYN96_07030 PF08494 DEAD/H associated IYN96_07030 PF00271 Helicase conserved C-terminal domain IYN96_07035 PF04679 ATP dependent DNA ligase C terminal region IYN96_07035 PF01068 ATP dependent DNA ligase domain IYN96_07035 PF04675 DNA ligase N terminus IYN96_07045 PF04675 DNA ligase N terminus IYN96_07045 PF04679 ATP dependent DNA ligase C terminal region IYN96_07045 PF01068 ATP dependent DNA ligase domain IYN96_07060 PF00990 Diguanylate cyclase, GGDEF domain IYN96_07075 PF00108 Thiolase, N-terminal domain IYN96_07075 PF02803 Thiolase, C-terminal domain IYN96_07080 PF12951 Passenger-associated-transport-repeat IYN96_07080 PF00082 Subtilase family IYN96_07080 PF03797 Autotransporter beta-domain IYN96_07085 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase IYN96_07085 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain IYN96_07095 PF01863 Protein of unknown function DUF45 IYN96_07100 PF07043 Protein of unknown function (DUF1328) IYN96_07110 PF01258 Prokaryotic dksA/traR C4-type zinc finger IYN96_07150 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IYN96_07160 PF03831 PhnA domain IYN96_07160 PF08274 PhnA Zinc-Ribbon IYN96_07170 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IYN96_07175 PF07690 Major Facilitator Superfamily IYN96_07210 PF09924 Uncharacterised conserved protein (DUF2156) IYN96_07210 PF03706 Lysylphosphatidylglycerol synthase TM region IYN96_07220 PF01042 Endoribonuclease L-PSP IYN96_07265 PF04542 Sigma-70 region 2 IYN96_07265 PF04545 Sigma-70, region 4 IYN96_07280 PF04060 Putative Fe-S cluster IYN96_07290 PF09334 tRNA synthetases class I (M) IYN96_07290 PF01588 Putative tRNA binding domain IYN96_07300 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IYN96_07305 PF00324 Amino acid permease IYN96_07310 PF02574 Homocysteine S-methyltransferase IYN96_07325 PF02592 Putative vitamin uptake transporter IYN96_07345 PF03551 Transcriptional regulator PadR-like family IYN96_07370 PF03653 Uncharacterised protein family (UPF0093) IYN96_07395 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit IYN96_07400 PF01336 OB-fold nucleic acid binding domain IYN96_07400 PF02811 PHP domain IYN96_07400 PF14579 Helix-hairpin-helix motif IYN96_07400 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IYN96_07400 PF07733 Bacterial DNA polymerase III alpha NTPase domain IYN96_07405 PF01351 Ribonuclease HII IYN96_07410 PF02684 Lipid-A-disaccharide synthetase IYN96_07415 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 IYN96_07415 PF00132 Bacterial transferase hexapeptide (six repeats) IYN96_07420 PF07977 FabA-like domain IYN96_07425 PF00132 Bacterial transferase hexapeptide (six repeats) IYN96_07425 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD IYN96_07430 PF05598 Transposase domain (DUF772) IYN96_07430 PF01609 Transposase DDE domain IYN96_07435 PF01103 Surface antigen IYN96_07435 PF07244 Surface antigen variable number repeat IYN96_07445 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain IYN96_07445 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase IYN96_07445 PF13288 DXP reductoisomerase C-terminal domain IYN96_07455 PF01255 Putative undecaprenyl diphosphate synthase IYN96_07460 PF01765 Ribosome recycling factor IYN96_07465 PF00696 Amino acid kinase family IYN96_07470 PF00990 Diguanylate cyclase, GGDEF domain IYN96_07470 PF00072 Response regulator receiver domain IYN96_07475 PF00889 Elongation factor TS IYN96_07480 PF00318 Ribosomal protein S2 IYN96_07515 PF00557 Metallopeptidase family M24 IYN96_07520 PF08335 GlnD PII-uridylyltransferase IYN96_07520 PF01966 HD domain IYN96_07520 PF01909 Nucleotidyltransferase domain IYN96_07525 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal IYN96_07525 PF00132 Bacterial transferase hexapeptide (six repeats) IYN96_07525 PF14602 Hexapeptide repeat of succinyl-transferase IYN96_07535 PF03960 ArsC family IYN96_07545 PF07687 Peptidase dimerisation domain IYN96_07545 PF01546 Peptidase family M20/M25/M40 IYN96_07550 PF00733 Asparagine synthase IYN96_07550 PF13537 Glutamine amidotransferase domain IYN96_07560 PF07715 TonB-dependent Receptor Plug Domain IYN96_07560 PF00593 TonB dependent receptor IYN96_07565 PF01804 Penicillin amidase IYN96_07570 PF00210 Ferritin-like domain IYN96_07575 PF03989 DNA gyrase C-terminal domain, beta-propeller IYN96_07575 PF00521 DNA gyrase/topoisomerase IV, subunit A IYN96_07580 PF12833 Helix-turn-helix domain IYN96_07590 PF02321 Outer membrane efflux protein IYN96_07595 PF00529 HlyD membrane-fusion protein of T1SS IYN96_07595 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IYN96_07600 PF07690 Major Facilitator Superfamily IYN96_07630 PF14310 Fibronectin type III-like domain IYN96_07630 PF00933 Glycosyl hydrolase family 3 N terminal domain IYN96_07630 PF01915 Glycosyl hydrolase family 3 C-terminal domain IYN96_07665 PF12802 MarR family IYN96_07705 PF00255 Glutathione peroxidase IYN96_07710 PF00175 Oxidoreductase NAD-binding domain IYN96_07710 PF00970 Oxidoreductase FAD-binding domain IYN96_07715 PF00005 ABC transporter IYN96_07720 PF05681 Fumarate hydratase (Fumerase) IYN96_07720 PF05683 Fumarase C-terminus IYN96_07735 PF02253 Phospholipase A1 IYN96_07755 PF00313 'Cold-shock' DNA-binding domain IYN96_07770 PF00899 ThiF family IYN96_07775 PF01026 TatD related DNase IYN96_07790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IYN96_07790 PF02770 Acyl-CoA dehydrogenase, middle domain IYN96_07790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IYN96_07800 PF00043 Glutathione S-transferase, C-terminal domain IYN96_07800 PF02798 Glutathione S-transferase, N-terminal domain IYN96_07805 PF00733 Asparagine synthase IYN96_07805 PF13537 Glutamine amidotransferase domain IYN96_07810 PF03358 NADPH-dependent FMN reductase IYN96_07815 PF03796 DnaB-like helicase C terminal domain IYN96_07815 PF00772 DnaB-like helicase N terminal domain IYN96_07820 PF03441 FAD binding domain of DNA photolyase IYN96_07820 PF00875 DNA photolyase IYN96_07830 PF05736 OprF membrane domain IYN96_07830 PF00691 OmpA family IYN96_07845 PF00990 Diguanylate cyclase, GGDEF domain IYN96_07855 PF00990 Diguanylate cyclase, GGDEF domain IYN96_07870 PF10609 NUBPL iron-transfer P-loop NTPase IYN96_07875 PF00692 dUTPase IYN96_07895 PF01738 Dienelactone hydrolase family IYN96_07900 PF00919 Uncharacterized protein family UPF0004 IYN96_07900 PF18693 TRAM domain IYN96_07900 PF04055 Radical SAM superfamily IYN96_07915 PF01272 Transcription elongation factor, GreA/GreB, C-term IYN96_07915 PF03449 Transcription elongation factor, N-terminal IYN96_07935 PF05872 Bacterial protein of unknown function (DUF853) IYN96_07950 PF02666 Phosphatidylserine decarboxylase IYN96_07955 PF02630 SCO1/SenC IYN96_07960 PF05175 Methyltransferase small domain IYN96_07965 PF01264 Chorismate synthase IYN96_07970 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IYN96_07970 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IYN96_07975 PF01118 Semialdehyde dehydrogenase, NAD binding domain IYN96_07975 PF02774 Semialdehyde dehydrogenase, dimerisation domain IYN96_07995 PF01416 tRNA pseudouridine synthase IYN96_08000 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase IYN96_08005 PF03466 LysR substrate binding domain IYN96_08005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IYN96_08010 PF00291 Pyridoxal-phosphate dependent enzyme IYN96_08020 PF00290 Tryptophan synthase alpha chain IYN96_08025 PF01039 Carboxyl transferase domain IYN96_08025 PF17848 Acetyl-coA carboxylase zinc finger domain IYN96_08030 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IYN96_08030 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IYN96_08030 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IYN96_08030 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IYN96_08045 PF00563 EAL domain IYN96_08045 PF00990 Diguanylate cyclase, GGDEF domain IYN96_08045 PF03707 Bacterial signalling protein N terminal repeat IYN96_08070 PF00121 Triosephosphate isomerase IYN96_08075 PF03840 Preprotein translocase SecG subunit IYN96_08085 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 IYN96_08090 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit IYN96_08095 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit IYN96_08100 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit IYN96_08110 PF10531 SLBB domain IYN96_08110 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region IYN96_08110 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit IYN96_08115 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region IYN96_08115 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal IYN96_08115 PF00384 Molybdopterin oxidoreductase IYN96_08120 PF00146 NADH dehydrogenase IYN96_08125 PF12838 4Fe-4S dicluster domain IYN96_08130 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 IYN96_08135 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L IYN96_08140 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus IYN96_08140 PF00361 Proton-conducting membrane transporter IYN96_08145 PF00361 Proton-conducting membrane transporter IYN96_08145 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus IYN96_08150 PF00361 Proton-conducting membrane transporter IYN96_08160 PF02576 RimP N-terminal domain IYN96_08160 PF17384 RimP C-terminal SH3 domain IYN96_08165 PF13184 NusA-like KH domain IYN96_08165 PF08529 NusA N-terminal domain IYN96_08165 PF00575 S1 RNA binding domain IYN96_08170 PF00009 Elongation factor Tu GTP binding domain IYN96_08170 PF11987 Translation-initiation factor 2 IYN96_08170 PF08364 Bacterial translation initiation factor IF-2 associated region IYN96_08170 PF04760 Translation initiation factor IF-2, N-terminal region IYN96_08175 PF02033 Ribosome-binding factor A IYN96_08180 PF16198 tRNA pseudouridylate synthase B C-terminal domain IYN96_08180 PF01509 TruB family pseudouridylate synthase (N terminal domain) IYN96_08180 PF09157 Pseudouridine synthase II TruB, C-terminal IYN96_08185 PF00312 Ribosomal protein S15 IYN96_08190 PF00575 S1 RNA binding domain IYN96_08190 PF03725 3' exoribonuclease family, domain 2 IYN96_08190 PF00013 KH domain IYN96_08190 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain IYN96_08190 PF01138 3' exoribonuclease family, domain 1 IYN96_08200 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain IYN96_08200 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain IYN96_08210 PF00731 AIR carboxylase IYN96_08215 PF02222 ATP-grasp domain IYN96_08215 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain IYN96_08220 PF02777 Iron/manganese superoxide dismutases, C-terminal domain IYN96_08220 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain IYN96_08225 PF00462 Glutaredoxin IYN96_08235 PF01914 MarC family integral membrane protein IYN96_08245 PF00593 TonB dependent receptor IYN96_08250 PF11892 Domain of unknown function (DUF3412) IYN96_08250 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases IYN96_08250 PF03641 Possible lysine decarboxylase IYN96_08255 PF07963 Prokaryotic N-terminal methylation motif IYN96_08255 PF12019 Type II transport protein GspH IYN96_08275 PF05567 Neisseria PilC beta-propeller domain IYN96_08280 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor IYN96_08280 PF07963 Prokaryotic N-terminal methylation motif IYN96_08345 PF00589 Phage integrase family IYN96_08345 PF02899 Phage integrase, N-terminal SAM-like domain IYN96_08350 PF07963 Prokaryotic N-terminal methylation motif IYN96_08350 PF00114 Pilin (bacterial filament) IYN96_08355 PF00271 Helicase conserved C-terminal domain IYN96_08355 PF04851 Type III restriction enzyme, res subunit IYN96_08355 PF02151 UvrB/uvrC motif IYN96_08355 PF12344 Ultra-violet resistance protein B IYN96_08355 PF17757 UvrB interaction domain IYN96_08370 PF03377 TAL effector repeat IYN96_08390 PF17392 Urocanase C-terminal domain IYN96_08390 PF17391 Urocanase N-terminal domain IYN96_08390 PF01175 Urocanase Rossmann-like domain IYN96_08400 PF00221 Aromatic amino acid lyase IYN96_08405 PF07969 Amidohydrolase family IYN96_08415 PF07702 UTRA domain IYN96_08415 PF00392 Bacterial regulatory proteins, gntR family IYN96_08440 PF01794 Ferric reductase like transmembrane component IYN96_08445 PF00174 Oxidoreductase molybdopterin binding domain IYN96_08450 PF00266 Aminotransferase class-V IYN96_08455 PF01842 ACT domain IYN96_08455 PF00800 Prephenate dehydratase IYN96_08455 PF01817 Chorismate mutase type II IYN96_08460 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IYN96_08475 PF03544 Gram-negative bacterial TonB protein C-terminal IYN96_08480 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IYN96_08480 PF02403 Seryl-tRNA synthetase N-terminal domain IYN96_08485 PF02525 Flavodoxin-like fold IYN96_08490 PF03466 LysR substrate binding domain IYN96_08490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IYN96_08530 PF05598 Transposase domain (DUF772) IYN96_08530 PF01609 Transposase DDE domain IYN96_08545 PF03377 TAL effector repeat IYN96_08560 PF00672 HAMP domain IYN96_08560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IYN96_08560 PF02203 Tar ligand binding domain homologue IYN96_08575 PF01627 Hpt domain IYN96_08575 PF00072 Response regulator receiver domain IYN96_08575 PF00672 HAMP domain IYN96_08575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IYN96_08575 PF00512 His Kinase A (phospho-acceptor) domain IYN96_08575 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IYN96_08580 PF06745 KaiC IYN96_08590 PF13426 PAS domain IYN96_08590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IYN96_08590 PF00072 Response regulator receiver domain IYN96_08605 PF03918 Cytochrome C biogenesis protein IYN96_08610 PF08534 Redoxin IYN96_08615 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal IYN96_08615 PF01578 Cytochrome C assembly protein IYN96_08620 PF03100 CcmE IYN96_08625 PF04995 Heme exporter protein D (CcmD) IYN96_08630 PF01578 Cytochrome C assembly protein IYN96_08635 PF00082 Subtilase family IYN96_08645 PF04542 Sigma-70 region 2 IYN96_08645 PF08281 Sigma-70, region 4 IYN96_08655 PF00034 Cytochrome c IYN96_08670 PF05523 WxcM-like, C-terminal IYN96_08690 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family IYN96_08695 PF01943 Polysaccharide biosynthesis protein IYN96_08700 PF00535 Glycosyl transferase family 2 IYN96_08715 PF08241 Methyltransferase domain IYN96_08735 PF13579 Glycosyl transferase 4-like domain IYN96_08735 PF00534 Glycosyl transferases group 1 IYN96_08755 PF00005 ABC transporter IYN96_08755 PF00664 ABC transporter transmembrane region IYN96_08765 PF00083 Sugar (and other) transporter IYN96_08775 PF00296 Luciferase-like monooxygenase IYN96_08790 PF03471 Transporter associated domain IYN96_08790 PF00571 CBS domain IYN96_08790 PF01595 Cyclin M transmembrane N-terminal domain IYN96_08800 PF01384 Phosphate transporter family IYN96_08815 PF00204 DNA gyrase B IYN96_08815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IYN96_08815 PF00986 DNA gyrase B subunit, carboxyl terminus IYN96_08815 PF01751 Toprim domain IYN96_08825 PF06418 CTP synthase N-terminus IYN96_08825 PF00117 Glutamine amidotransferase class-I IYN96_08830 PF00793 DAHP synthetase I family IYN96_08840 PF03952 Enolase, N-terminal domain IYN96_08840 PF00113 Enolase, C-terminal TIM barrel domain IYN96_08845 PF04977 Septum formation initiator IYN96_08850 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase IYN96_08860 PF02542 YgbB family IYN96_08865 PF01142 tRNA pseudouridine synthase D (TruD) IYN96_08875 PF01975 Survival protein SurE IYN96_08885 PF09335 SNARE associated Golgi protein IYN96_08890 PF01551 Peptidase family M23 IYN96_08890 PF01476 LysM domain IYN96_08900 PF01985 CRS1 / YhbY (CRM) domain IYN96_08905 PF01728 FtsJ-like methyltransferase IYN96_08910 PF00004 ATPase family associated with various cellular activities (AAA) IYN96_08910 PF06480 FtsH Extracellular IYN96_08910 PF01434 Peptidase family M41 IYN96_08910 PF17862 AAA+ lid domain IYN96_08915 PF00809 Pterin binding enzyme IYN96_08925 PF17209 Hfq protein IYN96_08930 PF01926 50S ribosome-binding GTPase IYN96_08930 PF16360 GTP-binding GTPase Middle Region IYN96_08930 PF13167 GTP-binding GTPase N-terminal IYN96_08935 PF02464 Competence-damaged protein IYN96_08940 PF03109 ABC1 family IYN96_08945 PF00717 Peptidase S24-like IYN96_08945 PF01726 LexA DNA binding domain IYN96_08950 PF00154 recA bacterial DNA recombination protein IYN96_08955 PF02631 RecX family IYN96_08960 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IYN96_08960 PF01411 tRNA synthetases class II (A) IYN96_08960 PF02272 DHHA1 domain IYN96_08965 PF02599 Global regulator protein family IYN96_09005 PF08460 Bacterial SH3 domain IYN96_09005 PF01551 Peptidase family M23 IYN96_09010 PF01979 Amidohydrolase family IYN96_09015 PF01809 Putative membrane protein insertion efficiency factor IYN96_09020 PF01258 Prokaryotic dksA/traR C4-type zinc finger IYN96_09035 PF02657 Fe-S metabolism associated domain IYN96_09040 PF01406 tRNA synthetases class I (C) catalytic domain IYN96_09040 PF09190 DALR domain IYN96_09050 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IYN96_09050 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IYN96_09055 PF00764 Arginosuccinate synthase IYN96_09065 PF07687 Peptidase dimerisation domain IYN96_09065 PF01546 Peptidase family M20/M25/M40 IYN96_09070 PF00696 Amino acid kinase family IYN96_09070 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase IYN96_09080 PF01118 Semialdehyde dehydrogenase, NAD binding domain IYN96_09085 PF00206 Lyase IYN96_09100 PF00696 Amino acid kinase family IYN96_09100 PF01472 PUA domain IYN96_09105 PF00171 Aldehyde dehydrogenase family IYN96_09110 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain IYN96_09110 PF02129 X-Pro dipeptidyl-peptidase (S15 family) IYN96_09135 PF01654 Cytochrome bd terminal oxidase subunit I IYN96_09145 PF00664 ABC transporter transmembrane region IYN96_09145 PF00005 ABC transporter IYN96_09150 PF00664 ABC transporter transmembrane region IYN96_09150 PF00005 ABC transporter IYN96_09165 PF00561 alpha/beta hydrolase fold IYN96_09175 PF03918 Cytochrome C biogenesis protein IYN96_09180 PF08534 Redoxin IYN96_09185 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal IYN96_09185 PF01578 Cytochrome C assembly protein IYN96_09190 PF03100 CcmE IYN96_09200 PF01578 Cytochrome C assembly protein IYN96_09205 PF03379 CcmB protein IYN96_09210 PF00005 ABC transporter IYN96_09215 PF00155 Aminotransferase class I and II IYN96_09220 PF00795 Carbon-nitrogen hydrolase IYN96_09235 PF00849 RNA pseudouridylate synthase IYN96_09235 PF01479 S4 domain IYN96_09240 PF04079 Segregation and condensation complex subunit ScpB IYN96_09245 PF02616 Segregation and condensation protein ScpA IYN96_09250 PF03795 YCII-related domain IYN96_09260 PF00356 Bacterial regulatory proteins, lacI family IYN96_09280 PF00528 Binding-protein-dependent transport system inner membrane component IYN96_09285 PF00528 Binding-protein-dependent transport system inner membrane component IYN96_09310 PF00795 Carbon-nitrogen hydrolase IYN96_09320 PF04371 Porphyromonas-type peptidyl-arginine deiminase IYN96_09330 PF00444 Ribosomal protein L36 IYN96_09335 PF02224 Cytidylate kinase IYN96_09340 PF00575 S1 RNA binding domain IYN96_09345 PF00216 Bacterial DNA-binding protein IYN96_09355 PF18073 Rubredoxin metal binding domain IYN96_09360 PF00953 Glycosyl transferase family 4 IYN96_09365 PF02719 Polysaccharide biosynthesis protein IYN96_09370 PF00483 Nucleotidyl transferase IYN96_09385 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain IYN96_09385 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain IYN96_09390 PF00571 CBS domain IYN96_09390 PF00478 IMP dehydrogenase / GMP reductase domain IYN96_09395 PF00117 Glutamine amidotransferase class-I IYN96_09395 PF00958 GMP synthase C terminal domain IYN96_09395 PF02540 NAD synthase IYN96_09400 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) IYN96_09405 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus IYN96_09405 PF00361 Proton-conducting membrane transporter IYN96_09405 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus IYN96_09410 PF03466 LysR substrate binding domain IYN96_09410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IYN96_09430 PF03601 Conserved hypothetical protein 698 IYN96_09435 PF03466 LysR substrate binding domain IYN96_09435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IYN96_09440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IYN96_09440 PF03466 LysR substrate binding domain IYN96_09455 PF00072 Response regulator receiver domain IYN96_09455 PF00196 Bacterial regulatory proteins, luxR family IYN96_09460 PF01566 Natural resistance-associated macrophage protein IYN96_09465 PF02742 Iron dependent repressor, metal binding and dimerisation domain IYN96_09465 PF01325 Iron dependent repressor, N-terminal DNA binding domain IYN96_09470 PF14437 MafB19-like deaminase IYN96_09475 PF00929 Exonuclease IYN96_09480 PF00924 Mechanosensitive ion channel IYN96_09480 PF05552 Conserved TM helix IYN96_09485 PF00391 PEP-utilising enzyme, mobile domain IYN96_09485 PF02896 PEP-utilising enzyme, TIM barrel domain IYN96_09485 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain IYN96_09490 PF03618 Kinase/pyrophosphorylase IYN96_09510 PF01066 CDP-alcohol phosphatidyltransferase IYN96_09520 PF00561 alpha/beta hydrolase fold IYN96_09535 PF01266 FAD dependent oxidoreductase IYN96_09535 PF00355 Rieske [2Fe-2S] domain IYN96_09545 PF00575 S1 RNA binding domain IYN96_09545 PF09371 Tex-like protein N-terminal domain IYN96_09545 PF16921 Tex protein YqgF-like domain IYN96_09545 PF17674 HHH domain IYN96_09555 PF09308 LuxQ, periplasmic IYN96_09555 PF00512 His Kinase A (phospho-acceptor) domain IYN96_09555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IYN96_09555 PF00072 Response regulator receiver domain IYN96_09645 PF00034 Cytochrome c IYN96_09655 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IYN96_09660 PF00873 AcrB/AcrD/AcrF family IYN96_09665 PF00873 AcrB/AcrD/AcrF family IYN96_09670 PF01609 Transposase DDE domain IYN96_09670 PF05598 Transposase domain (DUF772) IYN96_09675 PF01081 KDPG and KHG aldolase IYN96_09680 PF00920 Dehydratase family IYN96_09685 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase IYN96_09690 PF02685 Glucokinase IYN96_09695 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain IYN96_09695 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain IYN96_09700 PF00005 ABC transporter IYN96_09700 PF17912 MalK OB fold domain IYN96_09710 PF01571 Aminomethyltransferase folate-binding domain IYN96_09720 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit IYN96_09725 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit IYN96_09730 PF00890 FAD binding domain IYN96_09730 PF02910 Fumarate reductase flavoprotein C-term IYN96_09740 PF13085 2Fe-2S iron-sulfur cluster binding domain IYN96_09745 PF03937 Flavinator of succinate dehydrogenase IYN96_09755 PF02687 FtsX-like permease family IYN96_09755 PF12704 MacB-like periplasmic core domain IYN96_09760 PF00005 ABC transporter IYN96_09775 PF00753 Metallo-beta-lactamase superfamily IYN96_09775 PF03772 Competence protein IYN96_09780 PF01618 MotA/TolQ/ExbB proton channel family IYN96_09790 PF00664 ABC transporter transmembrane region IYN96_09790 PF00005 ABC transporter IYN96_09795 PF02606 Tetraacyldisaccharide-1-P 4'-kinase IYN96_09800 PF02348 Cytidylyltransferase IYN96_09805 PF01451 Low molecular weight phosphotyrosine protein phosphatase IYN96_09815 PF01541 GIY-YIG catalytic domain IYN96_09815 PF02151 UvrB/uvrC motif IYN96_09815 PF08459 UvrC Helix-hairpin-helix N-terminal IYN96_09820 PF01066 CDP-alcohol phosphatidyltransferase IYN96_09845 PF13936 Helix-turn-helix domain IYN96_09845 PF00665 Integrase core domain IYN96_09870 PF05598 Transposase domain (DUF772) IYN96_09870 PF01609 Transposase DDE domain IYN96_09890 PF00550 Phosphopantetheine attachment site IYN96_09890 PF00668 Condensation domain IYN96_09890 PF13193 AMP-binding enzyme C-terminal domain IYN96_09890 PF00975 Thioesterase domain IYN96_09890 PF00501 AMP-binding enzyme IYN96_09895 PF13193 AMP-binding enzyme C-terminal domain IYN96_09895 PF00668 Condensation domain IYN96_09895 PF00550 Phosphopantetheine attachment site IYN96_09895 PF00501 AMP-binding enzyme IYN96_09900 PF17837 4'-phosphopantetheinyl transferase N-terminal domain IYN96_09900 PF01648 4'-phosphopantetheinyl transferase superfamily IYN96_09910 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IYN96_09910 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IYN96_09910 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IYN96_09920 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IYN96_09930 PF00581 Rhodanese-like domain IYN96_09930 PF17773 UPF0176 acylphosphatase like domain IYN96_09935 PF00196 Bacterial regulatory proteins, luxR family IYN96_09935 PF00072 Response regulator receiver domain IYN96_09940 PF00575 S1 RNA binding domain IYN96_09940 PF12111 Polyribonucleotide phosphorylase C terminal IYN96_09940 PF10150 Ribonuclease E/G family IYN96_09945 PF00849 RNA pseudouridylate synthase IYN96_09945 PF01479 S4 domain IYN96_09950 PF11737 Protein of unknown function (DUF3300) IYN96_09970 PF01329 Pterin 4 alpha carbinolamine dehydratase IYN96_09975 PF01106 NifU-like domain IYN96_10030 PF06715 Gp5 C-terminal repeat (3 copies) IYN96_10030 PF04717 Type VI secretion system, phage-baseplate injector IYN96_10050 PF04717 Type VI secretion system, phage-baseplate injector IYN96_10055 PF05598 Transposase domain (DUF772) IYN96_10055 PF01609 Transposase DDE domain IYN96_10115 PF04717 Type VI secretion system, phage-baseplate injector IYN96_10115 PF06715 Gp5 C-terminal repeat (3 copies) IYN96_10120 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 IYN96_10125 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath IYN96_10130 PF05638 Type VI secretion system effector, Hcp IYN96_10135 PF07024 ImpE protein IYN96_10140 PF04965 Gene 25-like lysozyme IYN96_10145 PF05947 Type VI secretion system, TssF IYN96_10155 PF10431 C-terminal, D2-small domain, of ClpB protein IYN96_10155 PF17871 AAA lid domain IYN96_10155 PF07724 AAA domain (Cdc48 subfamily) IYN96_10155 PF00004 ATPase family associated with various cellular activities (AAA) IYN96_10180 PF06715 Gp5 C-terminal repeat (3 copies) IYN96_10180 PF04717 Type VI secretion system, phage-baseplate injector IYN96_10195 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE IYN96_10205 PF06761 Intracellular multiplication and human macrophage-killing IYN96_10205 PF14331 ImcF-related N-terminal domain IYN96_10205 PF06744 Type VI secretion protein IcmF C-terminal IYN96_10220 PF00069 Protein kinase domain IYN96_10235 PF06812 ImpA, N-terminal, type VI secretion system IYN96_10240 PF03466 LysR substrate binding domain IYN96_10240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IYN96_10245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IYN96_10245 PF00512 His Kinase A (phospho-acceptor) domain IYN96_10250 PF03150 Di-haem cytochrome c peroxidase IYN96_10250 PF00034 Cytochrome c IYN96_10255 PF00072 Response regulator receiver domain IYN96_10255 PF00486 Transcriptional regulatory protein, C terminal IYN96_10300 PF00529 HlyD membrane-fusion protein of T1SS IYN96_10300 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IYN96_10305 PF00873 AcrB/AcrD/AcrF family IYN96_10325 PF03377 TAL effector repeat IYN96_10330 PF04717 Type VI secretion system, phage-baseplate injector IYN96_10360 PF03377 TAL effector repeat IYN96_10375 PF00082 Subtilase family IYN96_10375 PF03797 Autotransporter beta-domain IYN96_10380 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IYN96_10385 PF00873 AcrB/AcrD/AcrF family IYN96_10390 PF02321 Outer membrane efflux protein IYN96_10395 PF00072 Response regulator receiver domain IYN96_10395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IYN96_10395 PF00512 His Kinase A (phospho-acceptor) domain IYN96_10395 PF08448 PAS fold IYN96_10395 PF13426 PAS domain IYN96_10400 PF00196 Bacterial regulatory proteins, luxR family IYN96_10400 PF00072 Response regulator receiver domain IYN96_10405 PF12951 Passenger-associated-transport-repeat IYN96_10410 PF00563 EAL domain IYN96_10410 PF08448 PAS fold IYN96_10410 PF08447 PAS fold IYN96_10410 PF00990 Diguanylate cyclase, GGDEF domain IYN96_10460 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IYN96_10460 PF10414 Sirohaem synthase dimerisation region IYN96_10460 PF14824 Sirohaem biosynthesis protein central IYN96_10485 PF12804 MobA-like NTP transferase domain IYN96_10490 PF03453 MoeA N-terminal region (domain I and II) IYN96_10490 PF03454 MoeA C-terminal region (domain IV) IYN96_10490 PF00994 Probable molybdopterin binding domain IYN96_10515 PF00899 ThiF family IYN96_10530 PF03453 MoeA N-terminal region (domain I and II) IYN96_10530 PF03454 MoeA C-terminal region (domain IV) IYN96_10530 PF00994 Probable molybdopterin binding domain IYN96_10535 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal IYN96_10535 PF01926 50S ribosome-binding GTPase IYN96_10540 PF01011 PQQ enzyme repeat IYN96_10540 PF13360 PQQ-like domain IYN96_10550 PF13464 Domain of unknown function (DUF4115) IYN96_10560 PF04055 Radical SAM superfamily IYN96_10565 PF00334 Nucleoside diphosphate kinase IYN96_10575 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IYN96_10575 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IYN96_10575 PF00378 Enoyl-CoA hydratase/isomerase IYN96_10580 PF02803 Thiolase, C-terminal domain IYN96_10580 PF00108 Thiolase, N-terminal domain IYN96_10585 PF00654 Voltage gated chloride channel IYN96_10595 PF02537 CrcB-like protein, Camphor Resistance (CrcB) IYN96_10605 PF12002 MgsA AAA+ ATPase C terminal IYN96_10605 PF00004 ATPase family associated with various cellular activities (AAA) IYN96_10605 PF16193 AAA C-terminal domain IYN96_10615 PF03548 Outer membrane lipoprotein carrier protein LolA IYN96_10625 PF13491 4TM region of DNA translocase FtsK/SpoIIIE IYN96_10625 PF17854 FtsK alpha domain IYN96_10625 PF09397 Ftsk gamma domain IYN96_10625 PF01580 FtsK/SpoIIIE family IYN96_10630 PF07992 Pyridine nucleotide-disulphide oxidoreductase IYN96_10645 PF03588 Leucyl/phenylalanyl-tRNA protein transferase IYN96_10650 PF01176 Translation initiation factor 1A / IF-1 IYN96_10655 PF10431 C-terminal, D2-small domain, of ClpB protein IYN96_10655 PF02861 Clp amino terminal domain, pathogenicity island component IYN96_10655 PF00004 ATPase family associated with various cellular activities (AAA) IYN96_10655 PF07724 AAA domain (Cdc48 subfamily) IYN96_10655 PF17871 AAA lid domain IYN96_10660 PF02617 ATP-dependent Clp protease adaptor protein ClpS IYN96_10665 PF00293 NUDIX domain IYN96_10675 PF04356 Protein of unknown function (DUF489) IYN96_10680 PF12729 Four helix bundle sensory module for signal transduction IYN96_10680 PF00672 HAMP domain IYN96_10680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IYN96_10695 PF03707 Bacterial signalling protein N terminal repeat IYN96_10695 PF00990 Diguanylate cyclase, GGDEF domain IYN96_10695 PF00563 EAL domain IYN96_10700 PF07730 Histidine kinase IYN96_10700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IYN96_10710 PF00512 His Kinase A (phospho-acceptor) domain IYN96_10710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IYN96_10730 PF01584 CheW-like domain IYN96_10730 PF00072 Response regulator receiver domain IYN96_10740 PF00460 Flagella basal body rod protein IYN96_10740 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IYN96_10745 PF03963 Flagellar hook capping protein - N-terminal region IYN96_10750 PF07559 Flagellar basal body protein FlaE IYN96_10750 PF00460 Flagella basal body rod protein IYN96_10750 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IYN96_10755 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IYN96_10755 PF00460 Flagella basal body rod protein IYN96_10760 PF00460 Flagella basal body rod protein IYN96_10760 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IYN96_10765 PF02107 Flagellar L-ring protein IYN96_10770 PF02119 Flagellar P-ring protein IYN96_10775 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase IYN96_10775 PF10135 Rod binding protein IYN96_10780 PF07196 Flagellin hook IN motif IYN96_10780 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IYN96_10790 PF00700 Bacterial flagellin C-terminal helical region IYN96_10790 PF00669 Bacterial flagellin N-terminal helical region IYN96_10795 PF07195 Flagellar hook-associated protein 2 C-terminus IYN96_10795 PF02465 Flagellar hook-associated protein 2 N-terminus IYN96_10795 PF07196 Flagellin hook IN motif IYN96_10800 PF02561 Flagellar protein FliS IYN96_10815 PF00196 Bacterial regulatory proteins, luxR family IYN96_10815 PF00072 Response regulator receiver domain IYN96_10820 PF00309 Sigma-54 factor, Activator interacting domain (AID) IYN96_10820 PF04963 Sigma-54 factor, core binding domain IYN96_10820 PF04552 Sigma-54, DNA binding domain IYN96_10825 PF01339 CheB methylesterase IYN96_10825 PF00072 Response regulator receiver domain IYN96_10830 PF00158 Sigma-54 interaction domain IYN96_10830 PF02954 Bacterial regulatory protein, Fis family IYN96_10830 PF06490 Flagellar regulatory protein FleQ IYN96_10835 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family IYN96_10845 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IYN96_10845 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IYN96_10850 PF00106 short chain dehydrogenase IYN96_10885 PF00534 Glycosyl transferases group 1 IYN96_10885 PF00535 Glycosyl transferase family 2 IYN96_10890 PF02049 Flagellar hook-basal body complex protein FliE IYN96_10895 PF08345 Flagellar M-ring protein C-terminal IYN96_10895 PF01514 Secretory protein of YscJ/FliF family IYN96_10900 PF14841 FliG middle domain IYN96_10900 PF14842 FliG N-terminal domain IYN96_10900 PF01706 FliG C-terminal domain IYN96_10910 PF18269 T3SS EscN ATPase C-terminal domain IYN96_10910 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IYN96_10930 PF02154 Flagellar motor switch protein FliM IYN96_10930 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term IYN96_10935 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term IYN96_10940 PF04347 Flagellar biosynthesis protein, FliO IYN96_10945 PF00813 FliP family IYN96_10950 PF01313 Bacterial export proteins, family 3 IYN96_10955 PF01311 Bacterial export proteins, family 1 IYN96_10960 PF00990 Diguanylate cyclase, GGDEF domain IYN96_10965 PF00990 Diguanylate cyclase, GGDEF domain IYN96_10975 PF01312 FlhB HrpN YscU SpaS Family IYN96_10980 PF00771 FHIPEP family IYN96_10985 PF00448 SRP54-type protein, GTPase domain IYN96_10990 PF10609 NUBPL iron-transfer P-loop NTPase IYN96_10995 PF04539 Sigma-70 region 3 IYN96_10995 PF04542 Sigma-70 region 2 IYN96_10995 PF04545 Sigma-70, region 4 IYN96_11000 PF00072 Response regulator receiver domain IYN96_11005 PF04344 Chemotaxis phosphatase, CheZ IYN96_11010 PF00072 Response regulator receiver domain IYN96_11010 PF01627 Hpt domain IYN96_11010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IYN96_11010 PF02895 Signal transducing histidine kinase, homodimeric domain IYN96_11010 PF01584 CheW-like domain IYN96_11115 PF07715 TonB-dependent Receptor Plug Domain IYN96_11115 PF00593 TonB dependent receptor IYN96_11125 PF02777 Iron/manganese superoxide dismutases, C-terminal domain IYN96_11125 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain IYN96_11135 PF07715 TonB-dependent Receptor Plug Domain IYN96_11135 PF00593 TonB dependent receptor IYN96_11140 PF01618 MotA/TolQ/ExbB proton channel family IYN96_11145 PF13677 Membrane MotB of proton-channel complex MotA/MotB IYN96_11145 PF00691 OmpA family IYN96_11150 PF13614 AAA domain IYN96_11155 PF01584 CheW-like domain IYN96_11165 PF00072 Response regulator receiver domain IYN96_11170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IYN96_11170 PF01627 Hpt domain IYN96_11170 PF02895 Signal transducing histidine kinase, homodimeric domain IYN96_11170 PF01584 CheW-like domain IYN96_11170 PF09078 CheY binding IYN96_11175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IYN96_11175 PF00672 HAMP domain IYN96_11175 PF02203 Tar ligand binding domain homologue IYN96_11200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IYN96_11200 PF02203 Tar ligand binding domain homologue IYN96_11200 PF00672 HAMP domain IYN96_11205 PF02203 Tar ligand binding domain homologue IYN96_11205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IYN96_11205 PF00672 HAMP domain IYN96_11210 PF02203 Tar ligand binding domain homologue IYN96_11210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IYN96_11210 PF00672 HAMP domain IYN96_11220 PF00672 HAMP domain IYN96_11220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IYN96_11220 PF02203 Tar ligand binding domain homologue IYN96_11225 PF02203 Tar ligand binding domain homologue IYN96_11225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IYN96_11225 PF00672 HAMP domain IYN96_11230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IYN96_11230 PF00672 HAMP domain IYN96_11230 PF02203 Tar ligand binding domain homologue IYN96_11235 PF02203 Tar ligand binding domain homologue IYN96_11235 PF00672 HAMP domain IYN96_11235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IYN96_11240 PF00672 HAMP domain IYN96_11240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IYN96_11240 PF02203 Tar ligand binding domain homologue IYN96_11250 PF07317 Flagellar regulator YcgR IYN96_11250 PF07238 PilZ domain IYN96_11255 PF01584 CheW-like domain IYN96_11265 PF02203 Tar ligand binding domain homologue IYN96_11265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IYN96_11265 PF00672 HAMP domain IYN96_11270 PF03705 CheR methyltransferase, all-alpha domain IYN96_11270 PF01739 CheR methyltransferase, SAM binding domain IYN96_11275 PF03975 CheD chemotactic sensory transduction IYN96_11280 PF00072 Response regulator receiver domain IYN96_11280 PF01339 CheB methylesterase IYN96_11285 PF03707 Bacterial signalling protein N terminal repeat IYN96_11285 PF00990 Diguanylate cyclase, GGDEF domain IYN96_11285 PF00563 EAL domain IYN96_11295 PF00561 alpha/beta hydrolase fold IYN96_11300 PF06434 Aconitate hydratase 2 N-terminus IYN96_11300 PF00330 Aconitase family (aconitate hydratase) IYN96_11300 PF11791 Aconitate B N-terminal domain IYN96_11315 PF00330 Aconitase family (aconitate hydratase) IYN96_11315 PF00694 Aconitase C-terminal domain IYN96_11325 PF13193 AMP-binding enzyme C-terminal domain IYN96_11325 PF00501 AMP-binding enzyme IYN96_11330 PF00378 Enoyl-CoA hydratase/isomerase IYN96_11335 PF00512 His Kinase A (phospho-acceptor) domain IYN96_11335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IYN96_11335 PF00072 Response regulator receiver domain IYN96_11335 PF01627 Hpt domain IYN96_11340 PF00072 Response regulator receiver domain IYN96_11345 PF00152 tRNA synthetases class II (D, K and N) IYN96_11345 PF01336 OB-fold nucleic acid binding domain IYN96_11355 PF00072 Response regulator receiver domain IYN96_11355 PF04397 LytTr DNA-binding domain IYN96_11370 PF01368 DHH family IYN96_11370 PF17768 RecJ OB domain IYN96_11370 PF02272 DHHA1 domain IYN96_11380 PF01272 Transcription elongation factor, GreA/GreB, C-term IYN96_11380 PF03449 Transcription elongation factor, N-terminal IYN96_11385 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IYN96_11385 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain IYN96_11385 PF02142 MGS-like domain IYN96_11395 PF00117 Glutamine amidotransferase class-I IYN96_11395 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain IYN96_11400 PF01113 Dihydrodipicolinate reductase, N-terminus IYN96_11400 PF05173 Dihydrodipicolinate reductase, C-terminus IYN96_11405 PF03475 3-alpha domain IYN96_11405 PF03473 MOSC domain IYN96_11410 PF00155 Aminotransferase class I and II IYN96_11430 PF07664 Ferrous iron transport protein B C terminus IYN96_11430 PF02421 Ferrous iron transport protein B IYN96_11430 PF07670 Nucleoside recognition IYN96_11440 PF00378 Enoyl-CoA hydratase/isomerase IYN96_11450 PF00682 HMGL-like IYN96_11455 PF00106 short chain dehydrogenase IYN96_11460 PF09285 Elongation factor P, C-terminal IYN96_11460 PF08207 Elongation factor P (EF-P) KOW-like domain IYN96_11460 PF01132 Elongation factor P (EF-P) OB domain IYN96_11480 PF02913 FAD linked oxidases, C-terminal domain IYN96_11480 PF01565 FAD binding domain IYN96_11485 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IYN96_11485 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IYN96_11495 PF13520 Amino acid permease IYN96_11500 PF13520 Amino acid permease IYN96_11505 PF00596 Class II Aldolase and Adducin N-terminal domain IYN96_11510 PF03079 ARD/ARD' family IYN96_11530 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase IYN96_11530 PF01502 Phosphoribosyl-AMP cyclohydrolase IYN96_11535 PF00977 Histidine biosynthesis protein IYN96_11540 PF00977 Histidine biosynthesis protein IYN96_11545 PF00117 Glutamine amidotransferase class-I IYN96_11550 PF00475 Imidazoleglycerol-phosphate dehydratase IYN96_11555 PF00155 Aminotransferase class I and II IYN96_11560 PF00815 Histidinol dehydrogenase IYN96_11565 PF01634 ATP phosphoribosyltransferase IYN96_11565 PF08029 HisG, C-terminal domain IYN96_11580 PF03129 Anticodon binding domain IYN96_11580 PF13393 Histidyl-tRNA synthetase IYN96_11595 PF00291 Pyridoxal-phosphate dependent enzyme IYN96_11595 PF14821 Threonine synthase N terminus IYN96_11630 PF08544 GHMP kinases C terminal IYN96_11630 PF00288 GHMP kinases N terminal domain IYN96_11635 PF03447 Homoserine dehydrogenase, NAD binding domain IYN96_11635 PF00742 Homoserine dehydrogenase IYN96_11635 PF01842 ACT domain IYN96_11635 PF00696 Amino acid kinase family IYN96_11635 PF13840 ACT domain IYN96_11650 PF00171 Aldehyde dehydrogenase family IYN96_11665 PF01180 Dihydroorotate dehydrogenase IYN96_11670 PF01565 FAD binding domain IYN96_11670 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain IYN96_11675 PF00892 EamA-like transporter family IYN96_11680 PF01177 Asp/Glu/Hydantoin racemase IYN96_11685 PF07690 Major Facilitator Superfamily IYN96_11695 PF01569 PAP2 superfamily IYN96_11700 PF04551 GcpE protein IYN96_11710 PF00072 Response regulator receiver domain IYN96_11715 PF00150 Cellulase (glycosyl hydrolase family 5) IYN96_11715 PF02013 Cellulose or protein binding domain IYN96_11725 PF01590 GAF domain IYN96_11725 PF00563 EAL domain IYN96_11725 PF00360 Phytochrome region IYN96_11725 PF00990 Diguanylate cyclase, GGDEF domain IYN96_11735 PF00474 Sodium:solute symporter family IYN96_11740 PF00933 Glycosyl hydrolase family 3 N terminal domain IYN96_11740 PF01915 Glycosyl hydrolase family 3 C-terminal domain IYN96_11740 PF14310 Fibronectin type III-like domain IYN96_11760 PF00342 Phosphoglucose isomerase IYN96_11765 PF02261 Aspartate decarboxylase IYN96_11770 PF02569 Pantoate-beta-alanine ligase IYN96_11775 PF02548 Ketopantoate hydroxymethyltransferase IYN96_11780 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) IYN96_11785 PF12626 Polymerase A arginine-rich C-terminus IYN96_11785 PF12627 Probable RNA and SrmB- binding site of polymerase A IYN96_11785 PF01743 Poly A polymerase head domain IYN96_11795 PF02649 Type I GTP cyclohydrolase folE2 IYN96_11800 PF01520 N-acetylmuramoyl-L-alanine amidase IYN96_11810 PF00083 Sugar (and other) transporter IYN96_11820 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IYN96_11820 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IYN96_11840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IYN96_11840 PF03466 LysR substrate binding domain IYN96_11845 PF01081 KDPG and KHG aldolase IYN96_11850 PF13378 Enolase C-terminal domain-like IYN96_11850 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IYN96_11855 PF08450 SMP-30/Gluconolactonase/LRE-like region IYN96_11860 PF05035 2-keto-3-deoxy-galactonokinase IYN96_11865 PF11953 Domain of unknown function (DUF3470) IYN96_11865 PF00037 4Fe-4S binding domain IYN96_11875 PF00701 Dihydrodipicolinate synthetase family IYN96_11890 PF00578 AhpC/TSA family IYN96_11895 PF02562 PhoH-like protein IYN96_11895 PF13638 PIN domain IYN96_11905 PF08543 Phosphomethylpyrimidine kinase IYN96_11905 PF02581 Thiamine monophosphate synthase IYN96_11930 PF03466 LysR substrate binding domain IYN96_11930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IYN96_11935 PF02678 Pirin IYN96_11935 PF17954 Quercetinase C-terminal cupin domain IYN96_11960 PF00295 Glycosyl hydrolases family 28 IYN96_11975 PF13419 Haloacid dehalogenase-like hydrolase IYN96_11985 PF01979 Amidohydrolase family IYN96_11995 PF09285 Elongation factor P, C-terminal IYN96_11995 PF08207 Elongation factor P (EF-P) KOW-like domain IYN96_11995 PF01132 Elongation factor P (EF-P) OB domain IYN96_12000 PF04055 Radical SAM superfamily IYN96_12005 PF00990 Diguanylate cyclase, GGDEF domain IYN96_12005 PF00563 EAL domain IYN96_12005 PF03707 Bacterial signalling protein N terminal repeat IYN96_12005 PF13188 PAS domain IYN96_12015 PF00588 SpoU rRNA Methylase family IYN96_12020 PF00459 Inositol monophosphatase family IYN96_12025 PF02777 Iron/manganese superoxide dismutases, C-terminal domain IYN96_12025 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain IYN96_12030 PF00545 ribonuclease IYN96_12050 PF16326 ABC transporter C-terminal domain IYN96_12050 PF00005 ABC transporter IYN96_12050 PF12848 ABC transporter IYN96_12055 PF03880 DbpA RNA binding domain IYN96_12055 PF00270 DEAD/DEAH box helicase IYN96_12055 PF00271 Helicase conserved C-terminal domain IYN96_12060 PF00156 Phosphoribosyl transferase domain IYN96_12065 PF02696 Uncharacterized ACR, YdiU/UPF0061 family IYN96_12075 PF14497 Glutathione S-transferase, C-terminal domain IYN96_12075 PF02798 Glutathione S-transferase, N-terminal domain IYN96_12080 PF00313 'Cold-shock' DNA-binding domain IYN96_12085 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 IYN96_12090 PF07152 YaeQ protein IYN96_12100 PF00072 Response regulator receiver domain IYN96_12100 PF00563 EAL domain IYN96_12100 PF00990 Diguanylate cyclase, GGDEF domain IYN96_12105 PF01435 Peptidase family M48 IYN96_12110 PF00749 tRNA synthetases class I (E and Q), catalytic domain IYN96_12115 PF00106 short chain dehydrogenase IYN96_12120 PF05233 PHB accumulation regulatory domain IYN96_12120 PF07879 PHB/PHA accumulation regulator DNA-binding domain IYN96_12135 PF01119 DNA mismatch repair protein, C-terminal domain IYN96_12135 PF08676 MutL C terminal dimerisation domain IYN96_12140 PF01520 N-acetylmuramoyl-L-alanine amidase IYN96_12140 PF11741 AMIN domain IYN96_12145 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE IYN96_12150 PF01256 Carbohydrate kinase IYN96_12150 PF03853 YjeF-related protein N-terminus IYN96_12155 PF08331 Domain of unknown function (DUF1730) IYN96_12160 PF13742 OB-fold nucleic acid binding domain IYN96_12160 PF02601 Exonuclease VII, large subunit IYN96_12175 PF03781 Sulfatase-modifying factor enzyme 1 IYN96_12185 PF01612 3'-5' exonuclease IYN96_12185 PF00570 HRDC domain IYN96_12190 PF04679 ATP dependent DNA ligase C terminal region IYN96_12190 PF01068 ATP dependent DNA ligase domain IYN96_12190 PF13298 DNA polymerase Ligase (LigD) IYN96_12245 PF00291 Pyridoxal-phosphate dependent enzyme IYN96_12275 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase IYN96_12300 PF03328 HpcH/HpaI aldolase/citrate lyase family IYN96_12355 PF01584 CheW-like domain IYN96_12360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IYN96_12360 PF00672 HAMP domain IYN96_12360 PF02743 Cache domain IYN96_12385 PF04386 Stringent starvation protein B IYN96_12390 PF02798 Glutathione S-transferase, N-terminal domain IYN96_12390 PF00043 Glutathione S-transferase, C-terminal domain IYN96_12395 PF02167 Cytochrome C1 family IYN96_12400 PF00032 Cytochrome b(C-terminal)/b6/petD IYN96_12400 PF00033 Cytochrome b/b6/petB IYN96_12405 PF00355 Rieske [2Fe-2S] domain IYN96_12405 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal IYN96_12410 PF01464 Transglycosylase SLT domain IYN96_12430 PF00919 Uncharacterized protein family UPF0004 IYN96_12430 PF01938 TRAM domain IYN96_12430 PF04055 Radical SAM superfamily IYN96_12435 PF02562 PhoH-like protein IYN96_12445 PF02130 Uncharacterized protein family UPF0054 IYN96_12455 PF00571 CBS domain IYN96_12455 PF03471 Transporter associated domain IYN96_12470 PF00171 Aldehyde dehydrogenase family IYN96_12475 PF00528 Binding-protein-dependent transport system inner membrane component IYN96_12480 PF00528 Binding-protein-dependent transport system inner membrane component IYN96_12490 PF00005 ABC transporter IYN96_12490 PF08402 TOBE domain IYN96_12495 PF02321 Outer membrane efflux protein IYN96_12500 PF07690 Major Facilitator Superfamily IYN96_12505 PF13533 Biotin-lipoyl like IYN96_12510 PF13416 Bacterial extracellular solute-binding protein IYN96_12515 PF00202 Aminotransferase class-III IYN96_12530 PF04717 Type VI secretion system, phage-baseplate injector IYN96_12560 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) IYN96_12560 PF04717 Type VI secretion system, phage-baseplate injector IYN96_12560 PF13296 Putative type VI secretion system Rhs element Vgr IYN96_12585 PF00120 Glutamine synthetase, catalytic domain IYN96_12590 PF07722 Peptidase C26 IYN96_12595 PF00120 Glutamine synthetase, catalytic domain IYN96_12600 PF01266 FAD dependent oxidoreductase IYN96_12605 PF00990 Diguanylate cyclase, GGDEF domain IYN96_12605 PF00072 Response regulator receiver domain IYN96_12610 PF00083 Sugar (and other) transporter IYN96_12610 PF07690 Major Facilitator Superfamily IYN96_12620 PF00384 Molybdopterin oxidoreductase IYN96_12625 PF02634 FdhD/NarQ family IYN96_12640 PF00202 Aminotransferase class-III IYN96_12645 PF00005 ABC transporter IYN96_12655 PF04286 Protein of unknown function (DUF445) IYN96_12660 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IYN96_12660 PF00072 Response regulator receiver domain IYN96_12660 PF01627 Hpt domain IYN96_12660 PF00512 His Kinase A (phospho-acceptor) domain IYN96_12660 PF00672 HAMP domain IYN96_12660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IYN96_12665 PF00072 Response regulator receiver domain IYN96_12675 PF07690 Major Facilitator Superfamily IYN96_12685 PF05088 Bacterial NAD-glutamate dehydrogenase IYN96_12695 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IYN96_12695 PF00529 HlyD membrane-fusion protein of T1SS IYN96_12700 PF00873 AcrB/AcrD/AcrF family IYN96_12705 PF01609 Transposase DDE domain IYN96_12705 PF13006 Insertion element 4 transposase N-terminal IYN96_12710 PF00356 Bacterial regulatory proteins, lacI family IYN96_12715 PF05524 PEP-utilising enzyme, N-terminal IYN96_12715 PF00391 PEP-utilising enzyme, mobile domain IYN96_12715 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IYN96_12715 PF00381 PTS HPr component phosphorylation site IYN96_12715 PF02896 PEP-utilising enzyme, TIM barrel domain IYN96_12720 PF00294 pfkB family carbohydrate kinase IYN96_12725 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IYN96_12735 PF05598 Transposase domain (DUF772) IYN96_12735 PF01609 Transposase DDE domain IYN96_12740 PF01593 Flavin containing amine oxidoreductase IYN96_12775 PF07549 SecD/SecF GG Motif IYN96_12775 PF02355 Protein export membrane protein IYN96_12780 PF07549 SecD/SecF GG Motif IYN96_12780 PF02355 Protein export membrane protein IYN96_12780 PF13721 SecD export protein N-terminal TM region IYN96_12785 PF02699 Preprotein translocase subunit IYN96_12790 PF01702 Queuine tRNA-ribosyltransferase IYN96_12795 PF02547 Queuosine biosynthesis protein IYN96_12850 PF00037 4Fe-4S binding domain IYN96_12860 PF01467 Cytidylyltransferase-like IYN96_12870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IYN96_12870 PF00183 Hsp90 protein IYN96_12900 PF04616 Glycosyl hydrolases family 43 IYN96_12905 PF07532 Bacterial Ig-like domain (group 4) IYN96_12910 PF07715 TonB-dependent Receptor Plug Domain IYN96_12910 PF00593 TonB dependent receptor IYN96_12920 PF00082 Subtilase family IYN96_12920 PF09286 Pro-kumamolisin, activation domain IYN96_12960 PF13520 Amino acid permease IYN96_12975 PF01321 Creatinase/Prolidase N-terminal domain IYN96_12975 PF00557 Metallopeptidase family M24 IYN96_12980 PF00171 Aldehyde dehydrogenase family IYN96_12985 PF00701 Dihydrodipicolinate synthetase family IYN96_12990 PF04324 BFD-like [2Fe-2S] binding domain IYN96_12990 PF07992 Pyridine nucleotide-disulphide oxidoreductase IYN96_13000 PF01266 FAD dependent oxidoreductase IYN96_13005 PF05544 Proline racemase IYN96_13015 PF00448 SRP54-type protein, GTPase domain IYN96_13015 PF02881 SRP54-type protein, helical bundle domain IYN96_13025 PF10576 Iron-sulfur binding domain of endonuclease III IYN96_13025 PF00633 Helix-hairpin-helix motif IYN96_13025 PF00730 HhH-GPD superfamily base excision DNA repair protein IYN96_13025 PF14815 NUDIX domain IYN96_13030 PF04362 Bacterial Fe(2+) trafficking IYN96_13035 PF13426 PAS domain IYN96_13035 PF00072 Response regulator receiver domain IYN96_13035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IYN96_13040 PF05598 Transposase domain (DUF772) IYN96_13040 PF01609 Transposase DDE domain IYN96_13065 PF08212 Lipocalin-like domain IYN96_13075 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IYN96_13075 PF12806 Acetyl-CoA dehydrogenase C-terminal like IYN96_13075 PF02770 Acyl-CoA dehydrogenase, middle domain IYN96_13075 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IYN96_13085 PF02780 Transketolase, C-terminal domain IYN96_13085 PF13292 1-deoxy-D-xylulose-5-phosphate synthase IYN96_13085 PF02779 Transketolase, pyrimidine binding domain IYN96_13105 PF03808 Glycosyl transferase WecB/TagA/CpsF family IYN96_13120 PF14667 Polysaccharide biosynthesis C-terminal domain IYN96_13130 PF13439 Glycosyltransferase Family 4 IYN96_13130 PF00534 Glycosyl transferases group 1 IYN96_13150 PF02397 Bacterial sugar transferase IYN96_13170 PF13411 MerR HTH family regulatory protein IYN96_13175 PF00216 Bacterial DNA-binding protein IYN96_13180 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain IYN96_13180 PF03483 B3/4 domain IYN96_13180 PF03147 Ferredoxin-fold anticodon binding domain IYN96_13180 PF03484 tRNA synthetase B5 domain IYN96_13180 PF01588 Putative tRNA binding domain IYN96_13185 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain IYN96_13185 PF01409 tRNA synthetases class II core domain (F) IYN96_13190 PF00453 Ribosomal protein L20 IYN96_13195 PF01632 Ribosomal protein L35 IYN96_13200 PF00707 Translation initiation factor IF-3, C-terminal domain IYN96_13200 PF05198 Translation initiation factor IF-3, N-terminal domain IYN96_13205 PF03129 Anticodon binding domain IYN96_13205 PF02824 TGS domain IYN96_13205 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IYN96_13205 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IYN96_13215 PF03989 DNA gyrase C-terminal domain, beta-propeller IYN96_13215 PF00521 DNA gyrase/topoisomerase IV, subunit A IYN96_13220 PF01008 Initiation factor 2 subunit family IYN96_13235 PF00152 tRNA synthetases class II (D, K and N) IYN96_13240 PF00533 BRCA1 C Terminus (BRCT) domain IYN96_13240 PF01653 NAD-dependent DNA ligase adenylation domain IYN96_13240 PF03120 NAD-dependent DNA ligase OB-fold domain IYN96_13240 PF03119 NAD-dependent DNA ligase C4 zinc finger domain IYN96_13240 PF12826 Helix-hairpin-helix motif IYN96_13255 PF04354 ZipA, C-terminal FtsZ-binding domain IYN96_13260 PF02463 RecF/RecN/SMC N terminal domain IYN96_13265 PF03948 Ribosomal protein L9, C-terminal domain IYN96_13265 PF01281 Ribosomal protein L9, N-terminal domain IYN96_13270 PF01084 Ribosomal protein S18 IYN96_13275 PF01250 Ribosomal protein S6 IYN96_13280 PF01521 Iron-sulphur cluster biosynthesis IYN96_13285 PF01336 OB-fold nucleic acid binding domain IYN96_13285 PF00152 tRNA synthetases class II (D, K and N) IYN96_13310 PF00484 Carbonic anhydrase IYN96_13315 PF06052 3-hydroxyanthranilic acid dioxygenase IYN96_13325 PF00266 Aminotransferase class-V IYN96_13330 PF01494 FAD binding domain IYN96_13335 PF08411 Exonuclease C-terminal IYN96_13335 PF00929 Exonuclease IYN96_13345 PF00248 Aldo/keto reductase family IYN96_13360 PF01513 ATP-NAD kinase IYN96_13370 PF10672 S-adenosylmethionine-dependent methyltransferase IYN96_13370 PF02926 THUMP domain IYN96_13370 PF01170 Putative RNA methylase family UPF0020 IYN96_13410 PF00581 Rhodanese-like domain IYN96_13415 PF00293 NUDIX domain IYN96_13420 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IYN96_13420 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase IYN96_13425 PF00378 Enoyl-CoA hydratase/isomerase IYN96_13435 PF00730 HhH-GPD superfamily base excision DNA repair protein IYN96_13435 PF10576 Iron-sulfur binding domain of endonuclease III IYN96_13435 PF00633 Helix-hairpin-helix motif IYN96_13445 PF00484 Carbonic anhydrase IYN96_13460 PF12849 PBP superfamily domain IYN96_13465 PF12849 PBP superfamily domain IYN96_13470 PF00528 Binding-protein-dependent transport system inner membrane component IYN96_13475 PF00528 Binding-protein-dependent transport system inner membrane component IYN96_13480 PF00005 ABC transporter IYN96_13485 PF01895 PhoU domain IYN96_13495 PF00929 Exonuclease IYN96_13505 PF08032 RNA 2'-O ribose methyltransferase substrate binding IYN96_13505 PF00588 SpoU rRNA Methylase family IYN96_13520 PF17876 Cold shock domain IYN96_13520 PF00575 S1 RNA binding domain IYN96_13520 PF00773 RNB domain IYN96_13520 PF08206 Ribonuclease B OB domain IYN96_13520 PF08461 Ribonuclease R winged-helix domain IYN96_13545 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IYN96_13545 PF02770 Acyl-CoA dehydrogenase, middle domain IYN96_13545 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IYN96_13550 PF01209 ubiE/COQ5 methyltransferase family IYN96_13570 PF00294 pfkB family carbohydrate kinase IYN96_13575 PF07690 Major Facilitator Superfamily IYN96_13580 PF00356 Bacterial regulatory proteins, lacI family IYN96_13595 PF04102 SlyX IYN96_13600 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IYN96_13600 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IYN96_13600 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IYN96_13605 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IYN96_13605 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase IYN96_13610 PF00255 Glutathione peroxidase IYN96_13620 PF00392 Bacterial regulatory proteins, gntR family IYN96_13625 PF00005 ABC transporter IYN96_13650 PF00206 Lyase IYN96_13650 PF10415 Fumarase C C-terminus IYN96_13665 PF08328 Adenylosuccinate lyase C-terminal IYN96_13665 PF00206 Lyase IYN96_13685 PF08007 Cupin superfamily protein IYN96_13695 PF16078 2-oxoglutarate dehydrogenase N-terminus IYN96_13695 PF00676 Dehydrogenase E1 component IYN96_13695 PF16870 2-oxoglutarate dehydrogenase C-terminal IYN96_13695 PF02779 Transketolase, pyrimidine binding domain IYN96_13700 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IYN96_13700 PF00364 Biotin-requiring enzyme IYN96_13700 PF02817 e3 binding domain IYN96_13705 PF07992 Pyridine nucleotide-disulphide oxidoreductase IYN96_13705 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IYN96_13715 PF03641 Possible lysine decarboxylase IYN96_13720 PF01205 Uncharacterized protein family UPF0029 IYN96_13725 PF00664 ABC transporter transmembrane region IYN96_13725 PF00005 ABC transporter IYN96_13735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IYN96_13735 PF03466 LysR substrate binding domain IYN96_13760 PF08543 Phosphomethylpyrimidine kinase IYN96_13765 PF00226 DnaJ domain IYN96_13765 PF00684 DnaJ central domain IYN96_13765 PF01556 DnaJ C terminal domain IYN96_13770 PF00012 Hsp70 protein IYN96_13775 PF01025 GrpE IYN96_13780 PF01628 HrcA protein C terminal domain IYN96_13780 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding IYN96_13785 PF02463 RecF/RecN/SMC N terminal domain IYN96_13790 PF01475 Ferric uptake regulator family IYN96_13795 PF04355 SmpA / OmlA family IYN96_13800 PF03658 RnfH family Ubiquitin IYN96_13805 PF03364 Polyketide cyclase / dehydrase and lipid transport IYN96_13810 PF01668 SmpB protein IYN96_13815 PF00082 Subtilase family IYN96_13870 PF03377 TAL effector repeat IYN96_13880 PF03377 TAL effector repeat IYN96_13885 PF07992 Pyridine nucleotide-disulphide oxidoreductase IYN96_13885 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IYN96_13890 PF01266 FAD dependent oxidoreductase IYN96_13895 PF04235 Protein of unknown function (DUF418) IYN96_13900 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IYN96_13905 PF00877 NlpC/P60 family IYN96_13910 PF00877 NlpC/P60 family IYN96_13930 PF00375 Sodium:dicarboxylate symporter family IYN96_13935 PF00245 Alkaline phosphatase IYN96_13940 PF01171 PP-loop family IYN96_13940 PF09179 TilS substrate binding domain IYN96_13940 PF11734 TilS substrate C-terminal domain IYN96_13945 PF02609 Exonuclease VII small subunit IYN96_13950 PF00348 Polyprenyl synthetase IYN96_13955 PF14521 Lysine-specific metallo-endopeptidase IYN96_13975 PF01523 Putative modulator of DNA gyrase IYN96_13980 PF04751 Protein of unknown function (DUF615) IYN96_13985 PF01523 Putative modulator of DNA gyrase IYN96_13995 PF13116 Protein of unknown function IYN96_13995 PF13502 AsmA-like C-terminal region IYN96_14000 PF10150 Ribonuclease E/G family IYN96_14000 PF00575 S1 RNA binding domain IYN96_14005 PF02545 Maf-like protein IYN96_14010 PF04402 Protein of unknown function (DUF541) IYN96_14035 PF02590 Predicted SPOUT methyltransferase IYN96_14055 PF01467 Cytidylyltransferase-like IYN96_14070 PF13603 Leucyl-tRNA synthetase, Domain 2 IYN96_14070 PF08264 Anticodon-binding domain of tRNA IYN96_14070 PF00133 tRNA synthetases class I (I, L, M and V) IYN96_14080 PF00085 Thioredoxin IYN96_14145 PF00005 ABC transporter IYN96_14145 PF00664 ABC transporter transmembrane region IYN96_14155 PF00873 AcrB/AcrD/AcrF family IYN96_14170 PF02321 Outer membrane efflux protein IYN96_14175 PF00072 Response regulator receiver domain IYN96_14175 PF00486 Transcriptional regulatory protein, C terminal IYN96_14180 PF00512 His Kinase A (phospho-acceptor) domain IYN96_14180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IYN96_14180 PF00672 HAMP domain IYN96_14185 PF00999 Sodium/hydrogen exchanger family IYN96_14190 PF00144 Beta-lactamase IYN96_14195 PF03737 Aldolase/RraA IYN96_14215 PF00849 RNA pseudouridylate synthase IYN96_14215 PF01479 S4 domain IYN96_14220 PF00563 EAL domain IYN96_14220 PF00990 Diguanylate cyclase, GGDEF domain IYN96_14220 PF08448 PAS fold IYN96_14225 PF03880 DbpA RNA binding domain IYN96_14225 PF00270 DEAD/DEAH box helicase IYN96_14225 PF00271 Helicase conserved C-terminal domain IYN96_14270 PF06029 AlkA N-terminal domain IYN96_14270 PF00730 HhH-GPD superfamily base excision DNA repair protein IYN96_14275 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain IYN96_14275 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IYN96_14285 PF00654 Voltage gated chloride channel IYN96_14290 PF00107 Zinc-binding dehydrogenase IYN96_14290 PF08240 Alcohol dehydrogenase GroES-like domain IYN96_14305 PF07715 TonB-dependent Receptor Plug Domain IYN96_14305 PF00593 TonB dependent receptor IYN96_14345 PF01475 Ferric uptake regulator family IYN96_14350 PF00749 tRNA synthetases class I (E and Q), catalytic domain IYN96_14360 PF00795 Carbon-nitrogen hydrolase IYN96_14395 PF17757 UvrB interaction domain IYN96_14395 PF03461 TRCF domain IYN96_14395 PF00271 Helicase conserved C-terminal domain IYN96_14395 PF02559 CarD-like/TRCF domain IYN96_14395 PF00270 DEAD/DEAH box helicase IYN96_14410 PF01584 CheW-like domain IYN96_14410 PF09078 CheY binding IYN96_14410 PF02895 Signal transducing histidine kinase, homodimeric domain IYN96_14410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IYN96_14410 PF01627 Hpt domain IYN96_14415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IYN96_14415 PF02203 Tar ligand binding domain homologue IYN96_14415 PF00672 HAMP domain IYN96_14420 PF01584 CheW-like domain IYN96_14425 PF13426 PAS domain IYN96_14425 PF00990 Diguanylate cyclase, GGDEF domain IYN96_14425 PF00563 EAL domain IYN96_14430 PF01739 CheR methyltransferase, SAM binding domain IYN96_14430 PF03705 CheR methyltransferase, all-alpha domain IYN96_14435 PF01339 CheB methylesterase IYN96_14435 PF00072 Response regulator receiver domain IYN96_14445 PF04717 Type VI secretion system, phage-baseplate injector IYN96_14450 PF03377 TAL effector repeat IYN96_14455 PF03377 TAL effector repeat IYN96_14465 PF03377 TAL effector repeat IYN96_14470 PF03377 TAL effector repeat IYN96_14475 PF03377 TAL effector repeat IYN96_14480 PF03377 TAL effector repeat IYN96_14495 PF04717 Type VI secretion system, phage-baseplate injector IYN96_14500 PF03377 TAL effector repeat IYN96_14510 PF00300 Histidine phosphatase superfamily (branch 1) IYN96_14515 PF04493 Endonuclease V IYN96_14525 PF05726 Pirin C-terminal cupin domain IYN96_14525 PF02678 Pirin IYN96_14595 PF04717 Type VI secretion system, phage-baseplate injector IYN96_14595 PF13296 Putative type VI secretion system Rhs element Vgr IYN96_14595 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) IYN96_14620 PF04717 Type VI secretion system, phage-baseplate injector IYN96_14630 PF02678 Pirin IYN96_14630 PF05726 Pirin C-terminal cupin domain IYN96_14635 PF02554 Carbon starvation protein CstA IYN96_14635 PF13722 5TM C-terminal transporter carbon starvation CstA IYN96_14640 PF04328 Selenoprotein, putative IYN96_14700 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase IYN96_14700 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain IYN96_14705 PF00941 FAD binding domain in molybdopterin dehydrogenase IYN96_14705 PF03450 CO dehydrogenase flavoprotein C-terminal domain IYN96_14710 PF10518 TAT (twin-arginine translocation) pathway signal sequence IYN96_14710 PF01799 [2Fe-2S] binding domain IYN96_14710 PF00111 2Fe-2S iron-sulfur cluster binding domain IYN96_14720 PF00360 Phytochrome region IYN96_14720 PF00990 Diguanylate cyclase, GGDEF domain IYN96_14720 PF01590 GAF domain IYN96_14720 PF00563 EAL domain IYN96_14725 PF00436 Single-strand binding protein family IYN96_14730 PF00348 Polyprenyl synthetase IYN96_14740 PF08245 Mur ligase middle domain IYN96_14755 PF00696 Amino acid kinase family IYN96_14755 PF01842 ACT domain IYN96_14765 PF02567 Phenazine biosynthesis-like protein IYN96_14775 PF02566 OsmC-like protein IYN96_14785 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IYN96_14785 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IYN96_14790 PF03652 Holliday junction resolvase IYN96_14795 PF02622 Uncharacterized ACR, COG1678 IYN96_14805 PF13673 Acetyltransferase (GNAT) domain IYN96_14805 PF13302 Acetyltransferase (GNAT) domain IYN96_14805 PF03352 Methyladenine glycosylase IYN96_14805 PF00117 Glutamine amidotransferase class-I IYN96_14805 PF00958 GMP synthase C terminal domain IYN96_14825 PF00437 Type II/IV secretion system protein IYN96_14830 PF00437 Type II/IV secretion system protein IYN96_14835 PF01168 Alanine racemase, N-terminal domain IYN96_14840 PF14748 Pyrroline-5-carboxylate reductase dimerisation IYN96_14840 PF03807 NADP oxidoreductase coenzyme F420-dependent IYN96_14890 PF02082 Transcriptional regulator IYN96_14895 PF01458 Uncharacterized protein family (UPF0051) IYN96_14900 PF00005 ABC transporter IYN96_14905 PF01458 Uncharacterized protein family (UPF0051) IYN96_14910 PF00266 Aminotransferase class-V IYN96_14920 PF00355 Rieske [2Fe-2S] domain IYN96_14940 PF07687 Peptidase dimerisation domain IYN96_14940 PF01546 Peptidase family M20/M25/M40 IYN96_14955 PF01636 Phosphotransferase enzyme family IYN96_14960 PF00483 Nucleotidyl transferase IYN96_14965 PF00308 Bacterial dnaA protein IYN96_14970 PF01594 AI-2E family transporter IYN96_14980 PF00586 AIR synthase related protein, N-terminal domain IYN96_14980 PF02769 AIR synthase related protein, C-terminal domain IYN96_14995 PF00551 Formyl transferase IYN96_15015 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IYN96_15020 PF01722 BolA-like protein IYN96_15025 PF01380 SIS domain IYN96_15025 PF00571 CBS domain IYN96_15040 PF03968 OstA-like protein IYN96_15045 PF00005 ABC transporter IYN96_15050 PF04963 Sigma-54 factor, core binding domain IYN96_15050 PF00309 Sigma-54 factor, Activator interacting domain (AID) IYN96_15050 PF04552 Sigma-54, DNA binding domain IYN96_15055 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein IYN96_15060 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IYN96_15065 PF07475 HPr Serine kinase C-terminal domain IYN96_15065 PF02603 HPr Serine kinase N terminus IYN96_15070 PF03668 P-loop ATPase protein family IYN96_15080 PF00381 PTS HPr component phosphorylation site IYN96_15085 PF02896 PEP-utilising enzyme, TIM barrel domain IYN96_15085 PF00391 PEP-utilising enzyme, mobile domain IYN96_15085 PF05524 PEP-utilising enzyme, N-terminal IYN96_15095 PF00756 Putative esterase IYN96_15100 PF02322 Cytochrome bd terminal oxidase subunit II IYN96_15105 PF01654 Cytochrome bd terminal oxidase subunit I IYN96_15115 PF00324 Amino acid permease IYN96_15125 PF00561 alpha/beta hydrolase fold IYN96_15130 PF00196 Bacterial regulatory proteins, luxR family IYN96_15135 PF00324 Amino acid permease IYN96_15150 PF12706 Beta-lactamase superfamily domain IYN96_15155 PF04820 Tryptophan halogenase IYN96_15180 PF09278 MerR, DNA binding IYN96_15180 PF00376 MerR family regulatory protein IYN96_15190 PF03738 Glutathionylspermidine synthase preATP-grasp IYN96_15215 PF04012 PspA/IM30 family IYN96_15225 PF01243 Pyridoxamine 5'-phosphate oxidase IYN96_15225 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region IYN96_15230 PF01202 Shikimate kinase IYN96_15235 PF01761 3-dehydroquinate synthase IYN96_15245 PF01208 Uroporphyrinogen decarboxylase (URO-D) IYN96_15290 PF06715 Gp5 C-terminal repeat (3 copies) IYN96_15290 PF04717 Type VI secretion system, phage-baseplate injector IYN96_15300 PF10431 C-terminal, D2-small domain, of ClpB protein IYN96_15300 PF17871 AAA lid domain IYN96_15300 PF07724 AAA domain (Cdc48 subfamily) IYN96_15300 PF00004 ATPase family associated with various cellular activities (AAA) IYN96_15310 PF05947 Type VI secretion system, TssF IYN96_15325 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath IYN96_15330 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 IYN96_15355 PF13296 Putative type VI secretion system Rhs element Vgr IYN96_15355 PF04717 Type VI secretion system, phage-baseplate injector IYN96_15355 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) IYN96_15370 PF04717 Type VI secretion system, phage-baseplate injector IYN96_15370 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) IYN96_15370 PF13296 Putative type VI secretion system Rhs element Vgr IYN96_15485 PF13296 Putative type VI secretion system Rhs element Vgr IYN96_15485 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) IYN96_15485 PF04717 Type VI secretion system, phage-baseplate injector IYN96_15505 PF04717 Type VI secretion system, phage-baseplate injector IYN96_15520 PF04972 BON domain IYN96_15520 PF00691 OmpA family IYN96_15530 PF06761 Intracellular multiplication and human macrophage-killing IYN96_15530 PF14331 ImcF-related N-terminal domain IYN96_15530 PF06744 Type VI secretion protein IcmF C-terminal IYN96_15565 PF02222 ATP-grasp domain IYN96_15590 PF00730 HhH-GPD superfamily base excision DNA repair protein IYN96_15605 PF00072 Response regulator receiver domain IYN96_15605 PF00196 Bacterial regulatory proteins, luxR family IYN96_15610 PF07730 Histidine kinase IYN96_15620 PF05209 Septum formation inhibitor MinC, N-terminal domain IYN96_15620 PF03775 Septum formation inhibitor MinC, C-terminal domain IYN96_15625 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IYN96_15630 PF03776 Septum formation topological specificity factor MinE IYN96_15640 PF00512 His Kinase A (phospho-acceptor) domain IYN96_15640 PF08521 Two-component sensor kinase N-terminal IYN96_15640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IYN96_15645 PF00072 Response regulator receiver domain IYN96_15645 PF00486 Transcriptional regulatory protein, C terminal IYN96_15650 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase IYN96_15660 PF08019 Phosphoethanolamine transferase EptA/EptB IYN96_15660 PF00884 Sulfatase IYN96_15680 PF03412 Peptidase C39 family IYN96_15680 PF00005 ABC transporter IYN96_15680 PF00664 ABC transporter transmembrane region IYN96_15700 PF02347 Glycine cleavage system P-protein IYN96_15725 PF18011 C-terminal domain found in long catalases IYN96_15725 PF06628 Catalase-related immune-responsive IYN96_15725 PF00199 Catalase IYN96_15760 PF02311 AraC-like ligand binding domain IYN96_15760 PF12833 Helix-turn-helix domain IYN96_15770 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region IYN96_15770 PF07676 WD40-like Beta Propeller Repeat IYN96_15770 PF00326 Prolyl oligopeptidase family IYN96_15785 PF03169 OPT oligopeptide transporter protein IYN96_15800 PF14579 Helix-hairpin-helix motif IYN96_15800 PF07733 Bacterial DNA polymerase III alpha NTPase domain IYN96_15800 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IYN96_15800 PF02811 PHP domain IYN96_15815 PF00717 Peptidase S24-like IYN96_15815 PF01726 LexA DNA binding domain IYN96_15840 PF13456 Reverse transcriptase-like IYN96_15840 PF00300 Histidine phosphatase superfamily (branch 1) IYN96_15870 PF01420 Type I restriction modification DNA specificity domain IYN96_15875 PF12161 HsdM N-terminal domain IYN96_15875 PF02384 N-6 DNA Methylase IYN96_15890 PF08463 EcoEI R protein C-terminal IYN96_15890 PF00271 Helicase conserved C-terminal domain IYN96_15890 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) IYN96_15890 PF04851 Type III restriction enzyme, res subunit IYN96_15905 PF08463 EcoEI R protein C-terminal IYN96_15905 PF00271 Helicase conserved C-terminal domain IYN96_15905 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) IYN96_15905 PF04851 Type III restriction enzyme, res subunit IYN96_15910 PF02661 Fic/DOC family IYN96_15915 PF02384 N-6 DNA Methylase IYN96_15920 PF01420 Type I restriction modification DNA specificity domain IYN96_15945 PF00440 Bacterial regulatory proteins, tetR family IYN96_15960 PF11838 ERAP1-like C-terminal domain IYN96_15960 PF01433 Peptidase family M1 domain IYN96_15965 PF00709 Adenylosuccinate synthetase IYN96_15975 PF01145 SPFH domain / Band 7 family IYN96_15980 PF01145 SPFH domain / Band 7 family IYN96_15980 PF12221 Bacterial membrane protein N terminal IYN96_15985 PF00072 Response regulator receiver domain IYN96_15990 PF00226 DnaJ domain IYN96_15990 PF01556 DnaJ C terminal domain IYN96_16000 PF08534 Redoxin IYN96_16040 PF00593 TonB dependent receptor IYN96_16040 PF07715 TonB-dependent Receptor Plug Domain IYN96_16045 PF04303 PrpF protein IYN96_16060 PF00694 Aconitase C-terminal domain IYN96_16060 PF00330 Aconitase family (aconitate hydratase) IYN96_16065 PF00285 Citrate synthase, C-terminal domain IYN96_16075 PF00158 Sigma-54 interaction domain IYN96_16075 PF06506 Propionate catabolism activator IYN96_16075 PF02954 Bacterial regulatory protein, Fis family IYN96_16100 PF09115 DNA polymerase III, delta subunit, C terminal IYN96_16105 PF02618 YceG-like family IYN96_16110 PF00425 chorismate binding enzyme IYN96_16110 PF04715 Anthranilate synthase component I, N terminal region IYN96_16115 PF00109 Beta-ketoacyl synthase, N-terminal domain IYN96_16115 PF02801 Beta-ketoacyl synthase, C-terminal domain IYN96_16120 PF00550 Phosphopantetheine attachment site IYN96_16130 PF00698 Acyl transferase domain IYN96_16140 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IYN96_16140 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IYN96_16145 PF01783 Ribosomal L32p protein family IYN96_16150 PF02620 Large ribosomal RNA subunit accumulation protein YceD IYN96_16155 PF02545 Maf-like protein IYN96_16170 PF17863 AAA lid domain IYN96_16170 PF07726 ATPase family associated with various cellular activities (AAA) IYN96_16180 PF11992 Domain of unknown function (DUF3488) IYN96_16180 PF13559 Domain of unknown function (DUF4129) IYN96_16180 PF01841 Transglutaminase-like superfamily IYN96_16190 PF01230 HIT domain IYN96_16195 PF02132 RecR protein IYN96_16195 PF13662 Toprim domain IYN96_16200 PF02575 YbaB/EbfC DNA-binding family IYN96_16205 PF12169 DNA polymerase III subunits gamma and tau domain III IYN96_16205 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding IYN96_16205 PF12170 DNA polymerase III tau subunit V interacting with alpha IYN96_16220 PF02391 MoaE protein IYN96_16225 PF02597 ThiS family IYN96_16230 PF01967 MoaC family IYN96_16240 PF06463 Molybdenum Cofactor Synthesis C IYN96_16240 PF04055 Radical SAM superfamily IYN96_16245 PF12706 Beta-lactamase superfamily domain IYN96_16245 PF00753 Metallo-beta-lactamase superfamily IYN96_16255 PF01075 Glycosyltransferase family 9 (heptosyltransferase) IYN96_16275 PF00929 Exonuclease IYN96_16280 PF00075 RNase H IYN96_16290 PF16123 Hydroxyacylglutathione hydrolase C-terminus IYN96_16290 PF00753 Metallo-beta-lactamase superfamily IYN96_16295 PF05257 CHAP domain IYN96_16295 PF01476 LysM domain IYN96_16320 PF00216 Bacterial DNA-binding protein IYN96_16325 PF02190 ATP-dependent protease La (LON) substrate-binding domain IYN96_16325 PF00004 ATPase family associated with various cellular activities (AAA) IYN96_16325 PF05362 Lon protease (S16) C-terminal proteolytic domain IYN96_16330 PF07724 AAA domain (Cdc48 subfamily) IYN96_16330 PF06689 ClpX C4-type zinc finger IYN96_16330 PF10431 C-terminal, D2-small domain, of ClpB protein IYN96_16335 PF00574 Clp protease IYN96_16340 PF05698 Bacterial trigger factor protein (TF) C-terminus IYN96_16340 PF05697 Bacterial trigger factor protein (TF) IYN96_16385 PF00180 Isocitrate/isopropylmalate dehydrogenase IYN96_16385 PF18324 Hypothetical protein TT1725 IYN96_16395 PF00462 Glutaredoxin IYN96_16400 PF01435 Peptidase family M48 IYN96_16400 PF13181 Tetratricopeptide repeat IYN96_16405 PF00072 Response regulator receiver domain IYN96_16405 PF00486 Transcriptional regulatory protein, C terminal IYN96_16410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IYN96_16410 PF11808 Phosphate regulon sensor protein PhoR IYN96_16410 PF00989 PAS fold IYN96_16410 PF00512 His Kinase A (phospho-acceptor) domain IYN96_16415 PF13089 Polyphosphate kinase N-terminal domain IYN96_16415 PF17941 Polyphosphate kinase C-terminal domain 1 IYN96_16415 PF13090 Polyphosphate kinase C-terminal domain 2 IYN96_16415 PF02503 Polyphosphate kinase middle domain IYN96_16420 PF02541 Ppx/GppA phosphatase family IYN96_16425 PF13439 Glycosyltransferase Family 4 IYN96_16425 PF00534 Glycosyl transferases group 1 IYN96_16430 PF01569 PAP2 superfamily IYN96_16435 PF00149 Calcineurin-like phosphoesterase IYN96_16460 PF04305 Protein of unknown function (DUF455) IYN96_16465 PF00156 Phosphoribosyl transferase domain IYN96_16480 PF08245 Mur ligase middle domain IYN96_16480 PF02875 Mur ligase family, glutamate ligase domain IYN96_16485 PF00300 Histidine phosphatase superfamily (branch 1) IYN96_16500 PF04185 Phosphoesterase family IYN96_16500 PF05506 Domain of unknown function (DUF756) IYN96_16510 PF00107 Zinc-binding dehydrogenase IYN96_16510 PF08240 Alcohol dehydrogenase GroES-like domain IYN96_16520 PF12857 TOBE-like domain IYN96_16520 PF00005 ABC transporter IYN96_16520 PF17850 CysA C-terminal regulatory domain IYN96_16525 PF00528 Binding-protein-dependent transport system inner membrane component IYN96_16530 PF00528 Binding-protein-dependent transport system inner membrane component IYN96_16540 PF00155 Aminotransferase class I and II IYN96_16550 PF00849 RNA pseudouridylate synthase IYN96_16560 PF05736 OprF membrane domain IYN96_16560 PF00691 OmpA family IYN96_16565 PF08240 Alcohol dehydrogenase GroES-like domain IYN96_16565 PF00107 Zinc-binding dehydrogenase IYN96_16570 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IYN96_16570 PF07992 Pyridine nucleotide-disulphide oxidoreductase IYN96_16580 PF00480 ROK family IYN96_16600 PF03009 Glycerophosphoryl diester phosphodiesterase family IYN96_16625 PF00056 lactate/malate dehydrogenase, NAD binding domain IYN96_16625 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain IYN96_16630 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IYN96_16635 PF00009 Elongation factor Tu GTP binding domain IYN96_16635 PF03144 Elongation factor Tu domain 2 IYN96_16635 PF00679 Elongation factor G C-terminus IYN96_16655 PF01474 Class-II DAHP synthetase family IYN96_16670 PF02600 Disulfide bond formation protein DsbB IYN96_16675 PF01196 Ribosomal protein L17 IYN96_16680 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain IYN96_16680 PF01000 RNA polymerase Rpb3/RpoA insert domain IYN96_16680 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain IYN96_16685 PF01479 S4 domain IYN96_16685 PF00163 Ribosomal protein S4/S9 N-terminal domain IYN96_16690 PF00411 Ribosomal protein S11 IYN96_16695 PF00416 Ribosomal protein S13/S18 IYN96_16700 PF00344 SecY translocase IYN96_16705 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A IYN96_16710 PF00327 Ribosomal protein L30p/L7e IYN96_16715 PF03719 Ribosomal protein S5, C-terminal domain IYN96_16715 PF00333 Ribosomal protein S5, N-terminal domain IYN96_16720 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast IYN96_16725 PF00347 Ribosomal protein L6 IYN96_16730 PF00410 Ribosomal protein S8 IYN96_16735 PF00253 Ribosomal protein S14p/S29e IYN96_16740 PF00281 Ribosomal protein L5 IYN96_16740 PF00673 ribosomal L5P family C-terminus IYN96_16745 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 IYN96_16745 PF00467 KOW motif IYN96_16750 PF00238 Ribosomal protein L14p/L23e IYN96_16755 PF00366 Ribosomal protein S17 IYN96_16760 PF00831 Ribosomal L29 protein IYN96_16765 PF00252 Ribosomal protein L16p/L10e IYN96_16770 PF00189 Ribosomal protein S3, C-terminal domain IYN96_16770 PF07650 KH domain IYN96_16775 PF00237 Ribosomal protein L22p/L17e IYN96_16780 PF00203 Ribosomal protein S19 IYN96_16785 PF03947 Ribosomal Proteins L2, C-terminal domain IYN96_16785 PF00181 Ribosomal Proteins L2, RNA binding domain IYN96_16790 PF00276 Ribosomal protein L23 IYN96_16795 PF00573 Ribosomal protein L4/L1 family IYN96_16800 PF00297 Ribosomal protein L3 IYN96_16805 PF00338 Ribosomal protein S10p/S20e IYN96_16815 PF00009 Elongation factor Tu GTP binding domain IYN96_16815 PF03144 Elongation factor Tu domain 2 IYN96_16815 PF03143 Elongation factor Tu C-terminal domain IYN96_16820 PF00679 Elongation factor G C-terminus IYN96_16820 PF14492 Elongation Factor G, domain II IYN96_16820 PF03764 Elongation factor G, domain IV IYN96_16820 PF00009 Elongation factor Tu GTP binding domain IYN96_16820 PF03144 Elongation factor Tu domain 2 IYN96_16825 PF00177 Ribosomal protein S7p/S5e IYN96_16830 PF00164 Ribosomal protein S12/S23 IYN96_16835 PF00623 RNA polymerase Rpb1, domain 2 IYN96_16835 PF04997 RNA polymerase Rpb1, domain 1 IYN96_16835 PF04983 RNA polymerase Rpb1, domain 3 IYN96_16835 PF05000 RNA polymerase Rpb1, domain 4 IYN96_16835 PF04998 RNA polymerase Rpb1, domain 5 IYN96_16840 PF04563 RNA polymerase beta subunit IYN96_16840 PF04561 RNA polymerase Rpb2, domain 2 IYN96_16840 PF04565 RNA polymerase Rpb2, domain 3 IYN96_16840 PF10385 RNA polymerase beta subunit external 1 domain IYN96_16840 PF00562 RNA polymerase Rpb2, domain 6 IYN96_16840 PF04560 RNA polymerase Rpb2, domain 7 IYN96_16845 PF00542 Ribosomal protein L7/L12 C-terminal domain IYN96_16845 PF16320 Ribosomal protein L7/L12 dimerisation domain IYN96_16850 PF00466 Ribosomal protein L10 IYN96_16855 PF00687 Ribosomal protein L1p/L10e family IYN96_16860 PF00298 Ribosomal protein L11, RNA binding domain IYN96_16860 PF03946 Ribosomal protein L11, N-terminal domain IYN96_16865 PF00467 KOW motif IYN96_16865 PF02357 Transcription termination factor nusG IYN96_16870 PF00584 SecE/Sec61-gamma subunits of protein translocation complex IYN96_16880 PF03144 Elongation factor Tu domain 2 IYN96_16880 PF00009 Elongation factor Tu GTP binding domain IYN96_16880 PF03143 Elongation factor Tu C-terminal domain IYN96_16900 PF01926 50S ribosome-binding GTPase IYN96_16900 PF06071 Protein of unknown function (DUF933) IYN96_16905 PF01195 Peptidyl-tRNA hydrolase IYN96_16910 PF14693 Ribosomal protein TL5, C-terminal domain IYN96_16910 PF01386 Ribosomal L25p family IYN96_16915 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase IYN96_16915 PF14572 Phosphoribosyl synthetase-associated domain IYN96_16925 PF00288 GHMP kinases N terminal domain IYN96_16925 PF08544 GHMP kinases C terminal IYN96_16930 PF03550 Outer membrane lipoprotein LolB IYN96_16940 PF01488 Shikimate / quinate 5-dehydrogenase IYN96_16940 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain IYN96_16940 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain IYN96_16945 PF03462 PCRF domain IYN96_16945 PF00472 RF-1 domain IYN96_16955 PF00994 Probable molybdopterin binding domain IYN96_16960 PF03976 Polyphosphate kinase 2 (PPK2) IYN96_16970 PF00708 Acylphosphatase IYN96_16975 PF08534 Redoxin IYN96_16980 PF03631 Virulence factor BrkB IYN96_16985 PF03358 NADPH-dependent FMN reductase IYN96_17015 PF04073 Aminoacyl-tRNA editing domain IYN96_17025 PF01063 Amino-transferase class IV IYN96_17050 PF02233 NAD(P) transhydrogenase beta subunit IYN96_17055 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch IYN96_17080 PF01262 Alanine dehydrogenase/PNT, C-terminal domain IYN96_17080 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch IYN96_17080 PF05222 Alanine dehydrogenase/PNT, N-terminal domain IYN96_17095 PF01367 5'-3' exonuclease, C-terminal SAM fold IYN96_17095 PF00476 DNA polymerase family A IYN96_17095 PF01612 3'-5' exonuclease IYN96_17095 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain IYN96_17100 PF00293 NUDIX domain IYN96_17110 PF00561 alpha/beta hydrolase fold IYN96_17125 PF05175 Methyltransferase small domain IYN96_17125 PF17827 PrmC N-terminal domain IYN96_17130 PF10417 C-terminal domain of 1-Cys peroxiredoxin IYN96_17130 PF00578 AhpC/TSA family IYN96_17135 PF07992 Pyridine nucleotide-disulphide oxidoreductase IYN96_17135 PF13192 Thioredoxin domain IYN96_17140 PF03466 LysR substrate binding domain IYN96_17140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IYN96_17150 PF00923 Transaldolase/Fructose-6-phosphate aldolase IYN96_17155 PF01625 Peptide methionine sulfoxide reductase IYN96_17165 PF00196 Bacterial regulatory proteins, luxR family IYN96_17165 PF00072 Response regulator receiver domain IYN96_17170 PF00990 Diguanylate cyclase, GGDEF domain IYN96_17170 PF00072 Response regulator receiver domain IYN96_17185 PF00749 tRNA synthetases class I (E and Q), catalytic domain IYN96_17185 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain IYN96_17195 PF00892 EamA-like transporter family IYN96_17215 PF01728 FtsJ-like methyltransferase IYN96_17215 PF18125 RlmM ferredoxin-like domain IYN96_17220 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IYN96_17220 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IYN96_17225 PF08450 SMP-30/Gluconolactonase/LRE-like region IYN96_17245 PF00378 Enoyl-CoA hydratase/isomerase IYN96_17250 PF00171 Aldehyde dehydrogenase family IYN96_17260 PF03466 LysR substrate binding domain IYN96_17260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IYN96_17265 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit IYN96_17265 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase IYN96_17270 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase IYN96_17295 PF01494 FAD binding domain IYN96_17300 PF01494 FAD binding domain IYN96_17310 PF01923 Cobalamin adenosyltransferase IYN96_17315 PF00850 Histone deacetylase domain IYN96_17320 PF04453 LPS transport system D IYN96_17320 PF03968 OstA-like protein IYN96_17325 PF09312 SurA N-terminal domain IYN96_17325 PF00639 PPIC-type PPIASE domain IYN96_17330 PF04166 Pyridoxal phosphate biosynthetic protein PdxA IYN96_17340 PF00398 Ribosomal RNA adenine dimethylase IYN96_17345 PF04379 ApaG domain IYN96_17350 PF00149 Calcineurin-like phosphoesterase IYN96_17355 PF00186 Dihydrofolate reductase IYN96_17365 PF00303 Thymidylate synthase IYN96_17370 PF01790 Prolipoprotein diacylglyceryl transferase IYN96_17390 PF01219 Prokaryotic diacylglycerol kinase IYN96_17405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IYN96_17405 PF00512 His Kinase A (phospho-acceptor) domain IYN96_17405 PF08521 Two-component sensor kinase N-terminal IYN96_17410 PF00072 Response regulator receiver domain IYN96_17410 PF00486 Transcriptional regulatory protein, C terminal IYN96_17415 PF13472 GDSL-like Lipase/Acylhydrolase family IYN96_17420 PF00005 ABC transporter IYN96_17430 PF02668 Taurine catabolism dioxygenase TauD, TfdA family IYN96_17445 PF00528 Binding-protein-dependent transport system inner membrane component IYN96_17465 PF00248 Aldo/keto reductase family IYN96_17475 PF07670 Nucleoside recognition IYN96_17475 PF07662 Na+ dependent nucleoside transporter C-terminus IYN96_17475 PF01773 Na+ dependent nucleoside transporter N-terminus IYN96_17480 PF00294 pfkB family carbohydrate kinase IYN96_17490 PF01207 Dihydrouridine synthase (Dus) IYN96_17505 PF00438 S-adenosylmethionine synthetase, N-terminal domain IYN96_17505 PF02773 S-adenosylmethionine synthetase, C-terminal domain IYN96_17505 PF02772 S-adenosylmethionine synthetase, central domain IYN96_17510 PF00328 Histidine phosphatase superfamily (branch 2) IYN96_17535 PF00311 Phosphoenolpyruvate carboxylase IYN96_17545 PF05221 S-adenosyl-L-homocysteine hydrolase IYN96_17545 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain IYN96_17550 PF13649 Methyltransferase domain IYN96_17580 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IYN96_17590 PF09286 Pro-kumamolisin, activation domain IYN96_17590 PF00082 Subtilase family IYN96_17595 PF00698 Acyl transferase domain IYN96_17595 PF00107 Zinc-binding dehydrogenase IYN96_17595 PF16197 Ketoacyl-synthetase C-terminal extension IYN96_17595 PF00109 Beta-ketoacyl synthase, N-terminal domain IYN96_17595 PF02801 Beta-ketoacyl synthase, C-terminal domain IYN96_17595 PF08659 KR domain IYN96_17595 PF00550 Phosphopantetheine attachment site IYN96_17595 PF14765 Polyketide synthase dehydratase IYN96_17595 PF08240 Alcohol dehydrogenase GroES-like domain IYN96_17605 PF02219 Methylenetetrahydrofolate reductase IYN96_17620 PF00293 NUDIX domain IYN96_17630 PF02810 SEC-C motif IYN96_17630 PF07517 SecA DEAD-like domain IYN96_17630 PF01043 SecA preprotein cross-linking domain IYN96_17630 PF07516 SecA Wing and Scaffold domain IYN96_17635 PF01476 LysM domain IYN96_17635 PF01551 Peptidase family M23 IYN96_17645 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase IYN96_17650 PF12327 FtsZ family, C-terminal domain IYN96_17650 PF00091 Tubulin/FtsZ family, GTPase domain IYN96_17660 PF02491 SHS2 domain inserted in FTSA IYN96_17665 PF03799 Cell division protein FtsQ IYN96_17665 PF08478 POTRA domain, FtsQ-type IYN96_17670 PF07478 D-ala D-ala ligase C-terminus IYN96_17670 PF01820 D-ala D-ala ligase N-terminus IYN96_17675 PF01225 Mur ligase family, catalytic domain IYN96_17675 PF02875 Mur ligase family, glutamate ligase domain IYN96_17675 PF08245 Mur ligase middle domain IYN96_17680 PF04101 Glycosyltransferase family 28 C-terminal domain IYN96_17680 PF03033 Glycosyltransferase family 28 N-terminal domain IYN96_17685 PF01098 Cell cycle protein IYN96_17690 PF00953 Glycosyl transferase family 4 IYN96_17695 PF08245 Mur ligase middle domain IYN96_17695 PF01225 Mur ligase family, catalytic domain IYN96_17695 PF02875 Mur ligase family, glutamate ligase domain IYN96_17700 PF08245 Mur ligase middle domain IYN96_17700 PF01225 Mur ligase family, catalytic domain IYN96_17700 PF02875 Mur ligase family, glutamate ligase domain IYN96_17705 PF00905 Penicillin binding protein transpeptidase domain IYN96_17705 PF03717 Penicillin-binding Protein dimerisation domain IYN96_17710 PF04999 Cell division protein FtsL IYN96_17715 PF01795 MraW methylase family IYN96_17720 PF02381 MraZ protein, putative antitoxin-like IYN96_17745 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IYN96_17755 PF02021 Uncharacterised protein family UPF0102 IYN96_17760 PF04307 LexA-binding, inner membrane-associated putative hydrolase IYN96_17765 PF01565 FAD binding domain IYN96_17765 PF02913 FAD linked oxidases, C-terminal domain IYN96_17770 PF00072 Response regulator receiver domain IYN96_17770 PF00486 Transcriptional regulatory protein, C terminal IYN96_17775 PF13493 Domain of unknown function (DUF4118) IYN96_17775 PF13492 GAF domain IYN96_17775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IYN96_17775 PF00512 His Kinase A (phospho-acceptor) domain IYN96_17775 PF02702 Osmosensitive K+ channel His kinase sensor domain IYN96_17780 PF02669 K+-transporting ATPase, c chain IYN96_17790 PF03814 Potassium-transporting ATPase A subunit IYN96_17810 PF00586 AIR synthase related protein, N-terminal domain IYN96_17810 PF02769 AIR synthase related protein, C-terminal domain IYN96_17815 PF01029 NusB family IYN96_17820 PF00885 6,7-dimethyl-8-ribityllumazine synthase IYN96_17825 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase IYN96_17825 PF00925 GTP cyclohydrolase II IYN96_17830 PF00677 Lumazine binding domain IYN96_17840 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IYN96_17840 PF01872 RibD C-terminal domain IYN96_17855 PF03477 ATP cone domain IYN96_17865 PF00464 Serine hydroxymethyltransferase IYN96_17885 PF00005 ABC transporter IYN96_17885 PF12848 ABC transporter IYN96_17905 PF00756 Putative esterase IYN96_17915 PF08240 Alcohol dehydrogenase GroES-like domain IYN96_17915 PF00107 Zinc-binding dehydrogenase IYN96_17920 PF02583 Metal-sensitive transcriptional repressor IYN96_17930 PF00072 Response regulator receiver domain IYN96_17930 PF00486 Transcriptional regulatory protein, C terminal IYN96_17935 PF00512 His Kinase A (phospho-acceptor) domain IYN96_17935 PF16527 Two-component sensor protein CpxA, periplasmic domain IYN96_17935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IYN96_17935 PF00672 HAMP domain IYN96_17965 PF04107 Glutamate-cysteine ligase family 2(GCS2) IYN96_17975 PF01926 50S ribosome-binding GTPase IYN96_17980 PF00034 Cytochrome c IYN96_18020 PF12627 Probable RNA and SrmB- binding site of polymerase A IYN96_18020 PF01966 HD domain IYN96_18020 PF01743 Poly A polymerase head domain IYN96_18035 PF14883 Hypothetical glycosyl hydrolase family 13 IYN96_18035 PF01522 Polysaccharide deacetylase IYN96_18040 PF00535 Glycosyl transferase family 2 IYN96_18050 PF01979 Amidohydrolase family IYN96_18055 PF01380 SIS domain IYN96_18060 PF00356 Bacterial regulatory proteins, lacI family IYN96_18065 PF07690 Major Facilitator Superfamily IYN96_18070 PF00392 Bacterial regulatory proteins, gntR family IYN96_18070 PF07702 UTRA domain IYN96_18085 PF16355 Domain of unknown function (DUF4982) IYN96_18085 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 IYN96_18085 PF00703 Glycosyl hydrolases family 2 IYN96_18085 PF02836 Glycosyl hydrolases family 2, TIM barrel domain IYN96_18085 PF02837 Glycosyl hydrolases family 2, sugar binding domain IYN96_18120 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) IYN96_18125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IYN96_18125 PF00512 His Kinase A (phospho-acceptor) domain IYN96_18130 PF00072 Response regulator receiver domain IYN96_18135 PF00512 His Kinase A (phospho-acceptor) domain IYN96_18135 PF08446 PAS fold IYN96_18135 PF00360 Phytochrome region IYN96_18135 PF01590 GAF domain IYN96_18135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IYN96_18140 PF04972 BON domain IYN96_18145 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IYN96_18145 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IYN96_18150 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain IYN96_18150 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IYN96_18185 PF01467 Cytidylyltransferase-like IYN96_18185 PF00293 NUDIX domain IYN96_18195 PF11818 C-terminal domain of tail specific protease (DUF3340) IYN96_18195 PF03572 Peptidase family S41 IYN96_18195 PF17804 Tail specific protease N-terminal domain IYN96_18195 PF00595 PDZ domain IYN96_18200 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family IYN96_18200 PF04055 Radical SAM superfamily IYN96_18205 PF03099 Biotin/lipoate A/B protein ligase family IYN96_18210 PF04359 Protein of unknown function (DUF493) IYN96_18225 PF00768 D-alanyl-D-alanine carboxypeptidase IYN96_18225 PF07943 Penicillin-binding protein 5, C-terminal domain IYN96_18230 PF03330 Lytic transglycolase IYN96_18230 PF05036 Sporulation related domain IYN96_18235 PF13406 Transglycosylase SLT domain IYN96_18250 PF13276 HTH-like domain IYN96_18250 PF13683 Integrase core domain IYN96_18260 PF01476 LysM domain IYN96_18260 PF05257 CHAP domain IYN96_18265 PF04717 Type VI secretion system, phage-baseplate injector IYN96_18265 PF13296 Putative type VI secretion system Rhs element Vgr IYN96_18265 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) IYN96_18275 PF01471 Putative peptidoglycan binding domain IYN96_18275 PF01476 LysM domain IYN96_18275 PF01510 N-acetylmuramoyl-L-alanine amidase IYN96_18280 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) IYN96_18280 PF13296 Putative type VI secretion system Rhs element Vgr IYN96_18280 PF04717 Type VI secretion system, phage-baseplate injector IYN96_18290 PF01098 Cell cycle protein IYN96_18295 PF03717 Penicillin-binding Protein dimerisation domain IYN96_18295 PF00905 Penicillin binding protein transpeptidase domain IYN96_18305 PF04085 rod shape-determining protein MreC IYN96_18315 PF00294 pfkB family carbohydrate kinase IYN96_18330 PF11838 ERAP1-like C-terminal domain IYN96_18330 PF01433 Peptidase family M1 domain IYN96_18335 PF00563 EAL domain IYN96_18335 PF00990 Diguanylate cyclase, GGDEF domain IYN96_18335 PF03707 Bacterial signalling protein N terminal repeat IYN96_18340 PF01209 ubiE/COQ5 methyltransferase family IYN96_18350 PF13533 Biotin-lipoyl like IYN96_18355 PF13673 Acetyltransferase (GNAT) domain IYN96_18365 PF00004 ATPase family associated with various cellular activities (AAA) IYN96_18365 PF07724 AAA domain (Cdc48 subfamily) IYN96_18365 PF10431 C-terminal, D2-small domain, of ClpB protein IYN96_18370 PF00227 Proteasome subunit IYN96_18380 PF02899 Phage integrase, N-terminal SAM-like domain IYN96_18380 PF00589 Phage integrase family IYN96_18390 PF01678 Diaminopimelate epimerase IYN96_18400 PF04304 Protein of unknown function (DUF454) IYN96_18405 PF00326 Prolyl oligopeptidase family IYN96_18405 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain IYN96_18410 PF00155 Aminotransferase class I and II IYN96_18420 PF00326 Prolyl oligopeptidase family IYN96_18420 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain IYN96_18445 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain IYN96_18445 PF03900 Porphobilinogen deaminase, C-terminal domain IYN96_18450 PF04397 LytTr DNA-binding domain IYN96_18450 PF00072 Response regulator receiver domain IYN96_18455 PF07694 5TMR of 5TMR-LYT IYN96_18455 PF06580 Histidine kinase IYN96_18465 PF13632 Glycosyl transferase family group 2 IYN96_18470 PF01609 Transposase DDE domain IYN96_18470 PF05598 Transposase domain (DUF772) IYN96_18485 PF00990 Diguanylate cyclase, GGDEF domain IYN96_18490 PF01740 STAS domain IYN96_18490 PF00916 Sulfate permease family IYN96_18510 PF00563 EAL domain IYN96_18510 PF00990 Diguanylate cyclase, GGDEF domain IYN96_18510 PF03707 Bacterial signalling protein N terminal repeat IYN96_18540 PF01204 Trehalase IYN96_18570 PF01544 CorA-like Mg2+ transporter protein IYN96_18580 PF00324 Amino acid permease IYN96_18600 PF03330 Lytic transglycolase IYN96_18605 PF00892 EamA-like transporter family IYN96_18620 PF07759 Protein of unknown function (DUF1615) IYN96_18660 PF00106 short chain dehydrogenase IYN96_18675 PF17831 Pyruvate dehydrogenase E1 component middle domain IYN96_18675 PF00456 Transketolase, thiamine diphosphate binding domain IYN96_18700 PF00793 DAHP synthetase I family IYN96_18710 PF07715 TonB-dependent Receptor Plug Domain IYN96_18710 PF00593 TonB dependent receptor IYN96_18725 PF00118 TCP-1/cpn60 chaperonin family IYN96_18730 PF00166 Chaperonin 10 Kd subunit IYN96_18755 PF03458 UPF0126 domain IYN96_18760 PF04542 Sigma-70 region 2 IYN96_18760 PF04545 Sigma-70, region 4 IYN96_18765 PF03167 Uracil DNA glycosylase superfamily IYN96_18770 PF01339 CheB methylesterase IYN96_18770 PF00072 Response regulator receiver domain IYN96_18775 PF18075 FtsX extracellular domain IYN96_18780 PF00005 ABC transporter IYN96_18785 PF12300 ATP-dependent RNA helicase RhlB IYN96_18785 PF00271 Helicase conserved C-terminal domain IYN96_18785 PF00270 DEAD/DEAH box helicase IYN96_18790 PF00085 Thioredoxin IYN96_18795 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IYN96_18795 PF07497 Rho termination factor, RNA-binding domain IYN96_18795 PF07498 Rho termination factor, N-terminal domain IYN96_18815 PF03971 Monomeric isocitrate dehydrogenase IYN96_18830 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term IYN96_18830 PF14489 QueF-like protein IYN96_18840 PF07687 Peptidase dimerisation domain IYN96_18840 PF01546 Peptidase family M20/M25/M40 IYN96_18845 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IYN96_18850 PF00873 AcrB/AcrD/AcrF family IYN96_18855 PF00873 AcrB/AcrD/AcrF family IYN96_18880 PF07063 Domain of unknown function (DUF1338) IYN96_18920 PF01427 D-ala-D-ala dipeptidase IYN96_18925 PF01510 N-acetylmuramoyl-L-alanine amidase IYN96_18935 PF13378 Enolase C-terminal domain-like IYN96_18935 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IYN96_18950 PF13520 Amino acid permease IYN96_18970 PF05360 yiaA/B two helix domain IYN96_18980 PF07995 Glucose / Sorbosone dehydrogenase IYN96_18995 PF14310 Fibronectin type III-like domain IYN96_18995 PF00933 Glycosyl hydrolase family 3 N terminal domain IYN96_18995 PF01915 Glycosyl hydrolase family 3 C-terminal domain IYN96_19000 PF02152 Dihydroneopterin aldolase IYN96_19005 PF00814 Glycoprotease family IYN96_19015 PF01165 Ribosomal protein S21 IYN96_19020 PF09424 Yqey-like protein IYN96_19035 PF03631 Virulence factor BrkB IYN96_19040 PF08278 DNA primase DnaG DnaB-binding IYN96_19040 PF01807 CHC2 zinc finger IYN96_19040 PF08275 DNA primase catalytic core, N-terminal domain IYN96_19040 PF10410 DnaB-helicase binding domain of primase IYN96_19050 PF13593 SBF-like CPA transporter family (DUF4137) IYN96_19065 PF01040 UbiA prenyltransferase family IYN96_19090 PF00510 Cytochrome c oxidase subunit III IYN96_19095 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 IYN96_19105 PF00115 Cytochrome C and Quinol oxidase polypeptide I IYN96_19110 PF02790 Cytochrome C oxidase subunit II, transmembrane domain IYN96_19110 PF00116 Cytochrome C oxidase subunit II, periplasmic domain IYN96_19120 PF18327 Proline utilization A proline dehydrogenase N-terminal domain IYN96_19120 PF14850 DNA-binding domain of Proline dehydrogenase IYN96_19120 PF00171 Aldehyde dehydrogenase family IYN96_19120 PF01619 Proline dehydrogenase IYN96_19160 PF00579 tRNA synthetases class I (W and Y) IYN96_19165 PF01551 Peptidase family M23 IYN96_19165 PF04225 Opacity-associated protein A LysM-like domain IYN96_19170 PF03702 Anhydro-N-acetylmuramic acid kinase IYN96_19180 PF07690 Major Facilitator Superfamily IYN96_19185 PF03372 Endonuclease/Exonuclease/phosphatase family IYN96_19215 PF07504 Fungalysin/Thermolysin Propeptide Motif IYN96_19215 PF01483 Proprotein convertase P-domain IYN96_19215 PF01447 Thermolysin metallopeptidase, catalytic domain IYN96_19215 PF02868 Thermolysin metallopeptidase, alpha-helical domain IYN96_19230 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus IYN96_19230 PF13244 Domain of unknown function (DUF4040) IYN96_19230 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter IYN96_19230 PF00361 Proton-conducting membrane transporter IYN96_19235 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L IYN96_19240 PF00361 Proton-conducting membrane transporter IYN96_19250 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) IYN96_19255 PF03334 Na+/H+ antiporter subunit IYN96_19265 PF04209 homogentisate 1,2-dioxygenase IYN96_19275 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IYN96_19280 PF01047 MarR family IYN96_19290 PF00854 POT family IYN96_19295 PF03301 Tryptophan 2,3-dioxygenase IYN96_19305 PF00676 Dehydrogenase E1 component IYN96_19310 PF02779 Transketolase, pyrimidine binding domain IYN96_19310 PF02780 Transketolase, C-terminal domain IYN96_19320 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IYN96_19320 PF00364 Biotin-requiring enzyme IYN96_19320 PF02817 e3 binding domain IYN96_19335 PF01609 Transposase DDE domain IYN96_19335 PF05598 Transposase domain (DUF772) IYN96_19340 PF00270 DEAD/DEAH box helicase IYN96_19340 PF00271 Helicase conserved C-terminal domain IYN96_19350 PF06903 VirK protein IYN96_19385 PF03377 TAL effector repeat IYN96_19390 PF13276 HTH-like domain IYN96_19390 PF13683 Integrase core domain IYN96_19410 PF00268 Ribonucleotide reductase, small chain IYN96_19415 PF02867 Ribonucleotide reductase, barrel domain IYN96_19415 PF00317 Ribonucleotide reductase, all-alpha domain IYN96_19415 PF03477 ATP cone domain IYN96_19425 PF13607 Succinyl-CoA ligase like flavodoxin domain IYN96_19425 PF00583 Acetyltransferase (GNAT) family IYN96_19425 PF13380 CoA binding domain IYN96_19435 PF00571 CBS domain IYN96_19435 PF01769 Divalent cation transporter IYN96_19435 PF03448 MgtE intracellular N domain IYN96_19440 PF00999 Sodium/hydrogen exchanger family IYN96_19440 PF02254 TrkA-N domain IYN96_19455 PF01609 Transposase DDE domain IYN96_19455 PF05598 Transposase domain (DUF772) IYN96_19470 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain IYN96_19470 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain IYN96_19475 PF00723 Glycosyl hydrolases family 15 IYN96_19490 PF05166 YcgL domain IYN96_19495 PF00109 Beta-ketoacyl synthase, N-terminal domain IYN96_19495 PF02801 Beta-ketoacyl synthase, C-terminal domain IYN96_19505 PF00535 Glycosyl transferase family 2 IYN96_19565 PF07977 FabA-like domain IYN96_19570 PF01553 Acyltransferase IYN96_19580 PF00550 Phosphopantetheine attachment site IYN96_19585 PF04820 Tryptophan halogenase IYN96_19625 PF01218 Coproporphyrinogen III oxidase IYN96_19635 PF00476 DNA polymerase family A IYN96_19635 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain IYN96_19635 PF01612 3'-5' exonuclease IYN96_19635 PF01367 5'-3' exonuclease, C-terminal SAM fold IYN96_19685 PF12464 Maltose acetyltransferase IYN96_19685 PF14602 Hexapeptide repeat of succinyl-transferase IYN96_19695 PF13361 UvrD-like helicase C-terminal domain IYN96_19695 PF00580 UvrD/REP helicase N-terminal domain IYN96_19710 PF13396 Phospholipase_D-nuclease N-terminal IYN96_19710 PF13091 PLD-like domain IYN96_19715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IYN96_19715 PF03466 LysR substrate binding domain IYN96_19720 PF03737 Aldolase/RraA IYN96_19725 PF04303 PrpF protein IYN96_19730 PF04909 Amidohydrolase IYN96_19735 PF00471 Ribosomal protein L33 IYN96_19740 PF00830 Ribosomal L28 family IYN96_19755 PF02527 rRNA small subunit methyltransferase G IYN96_19760 PF16655 PhoD-like phosphatase, N-terminal domain IYN96_19760 PF09423 PhoD-like phosphatase IYN96_19765 PF09423 PhoD-like phosphatase IYN96_19765 PF16655 PhoD-like phosphatase, N-terminal domain IYN96_19770 PF01648 4'-phosphopantetheinyl transferase superfamily IYN96_19775 PF04226 Transglycosylase associated protein IYN96_19785 PF03372 Endonuclease/Exonuclease/phosphatase family IYN96_19800 PF00474 Sodium:solute symporter family IYN96_19805 PF04341 Protein of unknown function, DUF485 IYN96_19815 PF16177 Acetyl-coenzyme A synthetase N-terminus IYN96_19815 PF00501 AMP-binding enzyme IYN96_19815 PF13193 AMP-binding enzyme C-terminal domain IYN96_19820 PF00196 Bacterial regulatory proteins, luxR family IYN96_19820 PF00072 Response regulator receiver domain IYN96_19845 PF09339 IclR helix-turn-helix domain IYN96_19845 PF01614 Bacterial transcriptional regulator IYN96_19850 PF02659 Putative manganese efflux pump IYN96_19855 PF00512 His Kinase A (phospho-acceptor) domain IYN96_19855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IYN96_19865 PF06165 Glycosyltransferase family 36 IYN96_19865 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain IYN96_19880 PF13360 PQQ-like domain IYN96_19880 PF13570 PQQ-like domain IYN96_19880 PF01011 PQQ enzyme repeat IYN96_19885 PF05598 Transposase domain (DUF772) IYN96_19885 PF01609 Transposase DDE domain IYN96_19900 PF01432 Peptidase family M3 IYN96_19920 PF00472 RF-1 domain IYN96_19930 PF00849 RNA pseudouridylate synthase IYN96_19945 PF03109 ABC1 family IYN96_19955 PF07478 D-ala D-ala ligase C-terminus IYN96_19955 PF01820 D-ala D-ala ligase N-terminus IYN96_19965 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family IYN96_19970 PF00501 AMP-binding enzyme IYN96_19975 PF03692 Putative zinc- or iron-chelating domain IYN96_19980 PF00561 alpha/beta hydrolase fold IYN96_19985 PF13784 Fic/DOC family N-terminal IYN96_19985 PF02661 Fic/DOC family IYN96_19990 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IYN96_19990 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IYN96_20005 PF00588 SpoU rRNA Methylase family IYN96_20010 PF07690 Major Facilitator Superfamily IYN96_20025 PF02954 Bacterial regulatory protein, Fis family IYN96_20025 PF00158 Sigma-54 interaction domain IYN96_20025 PF00072 Response regulator receiver domain IYN96_20030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IYN96_20030 PF00512 His Kinase A (phospho-acceptor) domain IYN96_20035 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IYN96_20035 PF00205 Thiamine pyrophosphate enzyme, central domain IYN96_20035 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IYN96_20045 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus IYN96_20045 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus IYN96_20050 PF02556 Preprotein translocase subunit SecB IYN96_20055 PF00581 Rhodanese-like domain IYN96_20100 PF01609 Transposase DDE domain IYN96_20100 PF05598 Transposase domain (DUF772) IYN96_20110 PF00108 Thiolase, N-terminal domain IYN96_20110 PF02803 Thiolase, C-terminal domain IYN96_20135 PF05598 Transposase domain (DUF772) IYN96_20135 PF01609 Transposase DDE domain IYN96_20165 PF00080 Copper/zinc superoxide dismutase (SODC) IYN96_20170 PF00080 Copper/zinc superoxide dismutase (SODC) IYN96_20175 PF00158 Sigma-54 interaction domain IYN96_20175 PF00072 Response regulator receiver domain IYN96_20175 PF02954 Bacterial regulatory protein, Fis family IYN96_20180 PF00989 PAS fold IYN96_20180 PF00512 His Kinase A (phospho-acceptor) domain IYN96_20180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IYN96_20185 PF00909 Ammonium Transporter Family IYN96_20190 PF00543 Nitrogen regulatory protein P-II IYN96_20195 PF00120 Glutamine synthetase, catalytic domain IYN96_20195 PF03951 Glutamine synthetase, beta-Grasp domain IYN96_20200 PF02673 Bacitracin resistance protein BacA IYN96_20240 PF03061 Thioesterase superfamily IYN96_20245 PF13091 PLD-like domain IYN96_20260 PF10609 NUBPL iron-transfer P-loop NTPase IYN96_20260 PF01883 Iron-sulfur cluster assembly protein IYN96_20280 PF01381 Helix-turn-helix IYN96_20285 PF13657 HipA N-terminal domain IYN96_20285 PF07804 HipA-like C-terminal domain IYN96_20290 PF10017 Histidine-specific methyltransferase, SAM-dependent IYN96_20295 PF03781 Sulfatase-modifying factor enzyme 1 IYN96_20295 PF12867 DinB superfamily IYN96_20305 PF00528 Binding-protein-dependent transport system inner membrane component IYN96_20310 PF00005 ABC transporter IYN96_20310 PF00571 CBS domain IYN96_20325 PF00005 ABC transporter IYN96_20335 PF01546 Peptidase family M20/M25/M40 IYN96_20335 PF07687 Peptidase dimerisation domain IYN96_20340 PF01734 Patatin-like phospholipase IYN96_20350 PF01037 Lrp/AsnC ligand binding domain IYN96_20355 PF00351 Biopterin-dependent aromatic amino acid hydroxylase IYN96_20375 PF00356 Bacterial regulatory proteins, lacI family IYN96_20395 PF00128 Alpha amylase, catalytic domain IYN96_20395 PF02806 Alpha amylase, C-terminal all-beta domain IYN96_20395 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IYN96_20400 PF00128 Alpha amylase, catalytic domain IYN96_20400 PF16657 Maltogenic Amylase, C-terminal domain IYN96_20405 PF00128 Alpha amylase, catalytic domain IYN96_20405 PF11896 Domain of unknown function (DUF3416) IYN96_20415 PF08479 POTRA domain, ShlB-type IYN96_20415 PF17287 POTRA domain IYN96_20415 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB IYN96_20420 PF13332 Hemagglutinin repeat IYN96_20420 PF05860 haemagglutination activity domain IYN96_20420 PF04829 Pre-toxin domain with VENN motif IYN96_20420 PF13018 Extended Signal Peptide of Type V secretion system IYN96_20425 PF08845 Toxin SymE, type I toxin-antitoxin system IYN96_20465 PF03594 Benzoate membrane transport protein IYN96_20470 PF00360 Phytochrome region IYN96_20470 PF13426 PAS domain IYN96_20470 PF08446 PAS fold IYN96_20470 PF01590 GAF domain IYN96_20475 PF01126 Heme oxygenase IYN96_20480 PF07690 Major Facilitator Superfamily IYN96_20485 PF01263 Aldose 1-epimerase IYN96_20500 PF02810 SEC-C motif IYN96_20540 PF01227 GTP cyclohydrolase I IYN96_20570 PF00083 Sugar (and other) transporter IYN96_20580 PF13091 PLD-like domain IYN96_20580 PF13396 Phospholipase_D-nuclease N-terminal IYN96_20630 PF05532 CsbD-like IYN96_20650 PF16485 Protealysin propeptide IYN96_20650 PF01447 Thermolysin metallopeptidase, catalytic domain IYN96_20650 PF02868 Thermolysin metallopeptidase, alpha-helical domain IYN96_20660 PF00293 NUDIX domain IYN96_20660 PF13344 Haloacid dehalogenase-like hydrolase IYN96_20690 PF00083 Sugar (and other) transporter IYN96_20690 PF08946 Osmosensory transporter coiled coil IYN96_20720 PF00294 pfkB family carbohydrate kinase IYN96_20725 PF07055 Enoyl reductase FAD binding domain IYN96_20725 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase IYN96_20725 PF12241 Trans-2-enoyl-CoA reductase catalytic region IYN96_20745 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family IYN96_20750 PF01070 FMN-dependent dehydrogenase IYN96_20755 PF05598 Transposase domain (DUF772) IYN96_20755 PF01609 Transposase DDE domain IYN96_20765 PF07715 TonB-dependent Receptor Plug Domain IYN96_20765 PF00593 TonB dependent receptor IYN96_20770 PF00155 Aminotransferase class I and II IYN96_20775 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain IYN96_20800 PF03006 Haemolysin-III related IYN96_20805 PF00270 DEAD/DEAH box helicase IYN96_20805 PF00271 Helicase conserved C-terminal domain IYN96_20805 PF09369 Domain of unknown function (DUF1998) IYN96_20865 PF01493 GXGXG motif IYN96_20865 PF01645 Conserved region in glutamate synthase IYN96_20865 PF04898 Glutamate synthase central domain IYN96_20865 PF00310 Glutamine amidotransferases class-II IYN96_20870 PF07992 Pyridine nucleotide-disulphide oxidoreductase IYN96_20870 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster IYN96_20880 PF13520 Amino acid permease IYN96_20890 PF02646 RmuC family IYN96_20900 PF00255 Glutathione peroxidase IYN96_20905 PF04333 MlaA lipoprotein IYN96_20915 PF05494 MlaC protein IYN96_20920 PF02470 MlaD protein IYN96_20925 PF02405 Permease MlaE IYN96_20930 PF00005 ABC transporter IYN96_20965 PF17946 RecC C-terminal domain IYN96_20970 PF13361 UvrD-like helicase C-terminal domain IYN96_20970 PF00580 UvrD/REP helicase N-terminal domain IYN96_20970 PF12705 PD-(D/E)XK nuclease superfamily IYN96_20975 PF13538 UvrD-like helicase C-terminal domain IYN96_20985 PF01381 Helix-turn-helix IYN96_21030 PF00665 Integrase core domain IYN96_21030 PF13936 Helix-turn-helix domain IYN96_21050 PF01609 Transposase DDE domain IYN96_21050 PF05598 Transposase domain (DUF772) IYN96_21055 PF00067 Cytochrome P450 IYN96_21060 PF00067 Cytochrome P450 IYN96_21065 PF00067 Cytochrome P450 IYN96_21080 PF00067 Cytochrome P450 IYN96_21085 PF00348 Polyprenyl synthetase IYN96_21100 PF01070 FMN-dependent dehydrogenase IYN96_21115 PF00849 RNA pseudouridylate synthase IYN96_21140 PF00990 Diguanylate cyclase, GGDEF domain IYN96_21150 PF02595 Glycerate kinase family IYN96_21155 PF07690 Major Facilitator Superfamily IYN96_21175 PF10672 S-adenosylmethionine-dependent methyltransferase IYN96_21175 PF17785 PUA-like domain IYN96_21180 PF03741 Integral membrane protein TerC family IYN96_21185 PF01694 Rhomboid family IYN96_21190 PF03009 Glycerophosphoryl diester phosphodiesterase family IYN96_21200 PF01569 PAP2 superfamily IYN96_21205 PF01926 50S ribosome-binding GTPase IYN96_21205 PF12631 MnmE helical domain IYN96_21205 PF10396 GTP-binding protein TrmE N-terminus IYN96_21210 PF01522 Polysaccharide deacetylase IYN96_21215 PF02096 60Kd inner membrane protein IYN96_21215 PF14849 YidC periplasmic domain IYN96_21220 PF00825 Ribonuclease P IYN96_21225 PF00468 Ribosomal protein L34