XPE_00025 SM00344 helix_turn_helix ASNC type XPE_00040 SM01323 XPE_00040 XPE_00115 SM00354 helix_turn _helix lactose operon repressor XPE_00145 SM00448 cheY-homologous receiver domain XPE_00145 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. XPE_00150 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XPE_00150 SM00091 PAS domain XPE_00150 SM00387 Histidine kinase-like ATPases XPE_00150 SM00388 His Kinase A (phosphoacceptor) domain XPE_00150 SM00448 cheY-homologous receiver domain XPE_00150 SM01079 XPE_00150 XPE_00205 SM00267 diguanylate cyclase XPE_00205 SM00448 cheY-homologous receiver domain XPE_00215 SM01230 XPE_00215 XPE_00225 SM01230 XPE_00225 XPE_00255 SM00382 ATPases associated with a variety of cellular activities XPE_00290 SM00116 Domain in cystathionine beta-synthase and other proteins. XPE_00290 SM01091 Transporter associated domain XPE_00315 SM00729 Elongator protein 3, MiaB family, Radical SAM XPE_00380 SM00487 DEAD-like helicases superfamily XPE_00380 SM00490 helicase superfamily c-terminal domain XPE_00390 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XPE_00390 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XPE_00395 SM00260 Two component signalling adaptor domain XPE_00400 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XPE_00400 SM00267 diguanylate cyclase XPE_00415 SM00528 Domain in histone-like proteins of HNS family XPE_00430 SM00474 3'-5' exonuclease XPE_00480 SM00646 XPE_00480 XPE_00485 SM00853 MutL C terminal dimerisation domain XPE_00485 SM01340 XPE_00485 XPE_00510 SM00822 XPE_00510 XPE_00525 SM00052 Putative diguanylate phosphodiesterase XPE_00525 SM00267 diguanylate cyclase XPE_00535 SM01322 XPE_00535 XPE_00540 SM00357 Cold shock protein domain XPE_00565 SM00487 DEAD-like helicases superfamily XPE_00565 SM00490 helicase superfamily c-terminal domain XPE_00570 SM00382 ATPases associated with a variety of cellular activities XPE_00605 SM00052 Putative diguanylate phosphodiesterase XPE_00605 SM00267 diguanylate cyclase XPE_00605 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XPE_00615 SM00841 Elongation factor P, C-terminal XPE_00615 SM01185 XPE_00615 XPE_00660 SM00849 Metallo-beta-lactamase superfamily XPE_00705 SM01234 XPE_00705 XPE_00725 SM00840 XPE_00725 XPE_00765 SM00859 Semialdehyde dehydrogenase, NAD binding domain XPE_00780 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase XPE_00795 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain XPE_00825 SM00382 ATPases associated with a variety of cellular activities XPE_00830 SM00382 ATPases associated with a variety of cellular activities XPE_00835 SM00357 Cold shock protein domain XPE_00885 SM00382 ATPases associated with a variety of cellular activities XPE_00910 SM00363 S4 RNA-binding domain XPE_00935 SM00354 helix_turn _helix lactose operon repressor XPE_01010 SM00316 Ribosomal protein S1-like RNA-binding domain XPE_01015 SM00411 bacterial (prokaryotic) histone like domain XPE_01025 SM00028 Tetratricopeptide repeats XPE_01035 SM00822 XPE_01035 XPE_01060 SM00116 Domain in cystathionine beta-synthase and other proteins. XPE_01060 SM01240 XPE_01060 XPE_01070 SM00829 Enoylreductase XPE_01130 SM00342 helix_turn_helix, arabinose operon control protein XPE_01150 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XPE_01155 SM00421 helix_turn_helix, Lux Regulon XPE_01155 SM00448 cheY-homologous receiver domain XPE_01160 SM00387 Histidine kinase-like ATPases XPE_01165 SM00342 helix_turn_helix, arabinose operon control protein XPE_01210 SM00529 Helix-turn-helix diphteria tox regulatory element XPE_01220 SM00479 XPE_01220 XPE_01290 SM00316 Ribosomal protein S1-like RNA-binding domain XPE_01290 SM00732 Likely ribonuclease with RNase H fold. XPE_01295 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XPE_01295 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XPE_01295 SM00091 PAS domain XPE_01295 SM00387 Histidine kinase-like ATPases XPE_01295 SM00388 His Kinase A (phosphoacceptor) domain XPE_01295 SM00448 cheY-homologous receiver domain XPE_01300 SM00448 cheY-homologous receiver domain XPE_01390 SM00382 ATPases associated with a variety of cellular activities XPE_01445 SM00382 ATPases associated with a variety of cellular activities XPE_01455 SM00849 Metallo-beta-lactamase superfamily XPE_01470 SM00382 ATPases associated with a variety of cellular activities XPE_01485 SM00226 Low molecular weight phosphatase family XPE_01495 SM00278 Helix-hairpin-helix DNA-binding motif class 1 XPE_01495 SM00465 GIY-YIG type nucleases (URI domain) XPE_01525 SM00984 UDP binding domain XPE_01545 SM00450 Rhodanese Homology Domain XPE_01550 SM00421 helix_turn_helix, Lux Regulon XPE_01550 SM00448 cheY-homologous receiver domain XPE_01555 SM00316 Ribosomal protein S1-like RNA-binding domain XPE_01560 SM00363 S4 RNA-binding domain XPE_01630 SM01034 Sensors of blue-light using FAD XPE_01695 SM00849 Metallo-beta-lactamase superfamily XPE_01700 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor XPE_01715 SM00342 helix_turn_helix, arabinose operon control protein XPE_01725 SM00387 Histidine kinase-like ATPases XPE_01735 SM00421 helix_turn_helix, Lux Regulon XPE_01735 SM00448 cheY-homologous receiver domain XPE_01745 SM00421 helix_turn_helix, Lux Regulon XPE_01765 SM00448 cheY-homologous receiver domain XPE_01765 SM00862 Transcriptional regulatory protein, C terminal XPE_01775 SM00387 Histidine kinase-like ATPases XPE_01805 SM00331 Sigma factor PP2C-like phosphatases XPE_01805 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain XPE_01830 SM00240 Forkhead associated domain XPE_01865 SM00382 ATPases associated with a variety of cellular activities XPE_01865 SM01086 C-terminal, D2-small domain, of ClpB protein XPE_01960 SM00869 Autotransporter beta-domain XPE_01985 SM00387 Histidine kinase-like ATPases XPE_01985 SM00388 His Kinase A (phosphoacceptor) domain XPE_01990 SM00421 helix_turn_helix, Lux Regulon XPE_01990 SM00448 cheY-homologous receiver domain XPE_01995 SM00869 Autotransporter beta-domain XPE_02000 SM00052 Putative diguanylate phosphodiesterase XPE_02035 SM00926 Molybdopterin oxidoreductase Fe4S4 domain XPE_02060 SM00448 cheY-homologous receiver domain XPE_02060 SM01012 XPE_02060 XPE_02075 SM00822 XPE_02075 XPE_02080 SM00342 helix_turn_helix, arabinose operon control protein XPE_02095 SM00852 Probable molybdopterin binding domain XPE_02150 SM00450 Rhodanese Homology Domain XPE_02155 SM00852 Probable molybdopterin binding domain XPE_02160 SM00382 ATPases associated with a variety of cellular activities XPE_02165 SM00564 beta-propeller repeat XPE_02180 SM00028 Tetratricopeptide repeats XPE_02190 SM00562 XPE_02190 XPE_02215 SM00382 ATPases associated with a variety of cellular activities XPE_02240 SM00382 ATPases associated with a variety of cellular activities XPE_02240 SM00843 XPE_02240 XPE_02265 SM00316 Ribosomal protein S1-like RNA-binding domain XPE_02270 SM00382 ATPases associated with a variety of cellular activities XPE_02270 SM01086 C-terminal, D2-small domain, of ClpB protein XPE_02295 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XPE_02310 SM00052 Putative diguanylate phosphodiesterase XPE_02310 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XPE_02310 SM00091 PAS domain XPE_02310 SM00267 diguanylate cyclase XPE_02315 SM00091 PAS domain XPE_02315 SM00387 Histidine kinase-like ATPases XPE_02320 SM00052 Putative diguanylate phosphodiesterase XPE_02320 SM00267 diguanylate cyclase XPE_02320 SM00448 cheY-homologous receiver domain XPE_02325 SM00387 Histidine kinase-like ATPases XPE_02340 SM00858 XPE_02340 XPE_02345 SM00260 Two component signalling adaptor domain XPE_02345 SM00448 cheY-homologous receiver domain XPE_02395 SM00047 Lysozyme subfamily 2 XPE_02435 SM00421 helix_turn_helix, Lux Regulon XPE_02435 SM00448 cheY-homologous receiver domain XPE_02445 SM00448 cheY-homologous receiver domain XPE_02450 SM00382 ATPases associated with a variety of cellular activities XPE_02470 SM00822 XPE_02470 XPE_02475 SM00822 XPE_02475 XPE_02530 SM00382 ATPases associated with a variety of cellular activities XPE_02585 SM00267 diguanylate cyclase XPE_02595 SM00267 diguanylate cyclase XPE_02600 SM00052 Putative diguanylate phosphodiesterase XPE_02600 SM00267 diguanylate cyclase XPE_02615 SM00382 ATPases associated with a variety of cellular activities XPE_02615 SM00962 SRP54-type protein, GTPase domain XPE_02630 SM00448 cheY-homologous receiver domain XPE_02640 SM00073 Histidine Phosphotransfer domain XPE_02640 SM00260 Two component signalling adaptor domain XPE_02640 SM00387 Histidine kinase-like ATPases XPE_02640 SM01231 XPE_02640 XPE_02750 SM00448 cheY-homologous receiver domain XPE_02755 SM00073 Histidine Phosphotransfer domain XPE_02755 SM00260 Two component signalling adaptor domain XPE_02755 SM00387 Histidine kinase-like ATPases XPE_02755 SM01231 XPE_02755 XPE_02760 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XPE_02760 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XPE_02765 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XPE_02765 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XPE_02775 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XPE_02775 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XPE_02775 SM01049 XPE_02775 XPE_02780 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XPE_02780 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XPE_02790 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XPE_02795 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XPE_02795 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XPE_02800 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XPE_02800 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XPE_02805 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XPE_02805 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XPE_02815 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XPE_02815 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XPE_02825 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XPE_02825 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XPE_02830 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XPE_02830 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XPE_02835 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XPE_02835 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XPE_02840 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XPE_02840 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XPE_02855 SM00260 Two component signalling adaptor domain XPE_02865 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XPE_02865 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XPE_02870 SM00138 Methyltransferase, chemotaxis proteins XPE_02880 SM00448 cheY-homologous receiver domain XPE_02885 SM00052 Putative diguanylate phosphodiesterase XPE_02885 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XPE_02885 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XPE_02885 SM00091 PAS domain XPE_02885 SM00267 diguanylate cyclase XPE_02905 SM00966 SpoVT / AbrB like domain XPE_02930 SM00073 Histidine Phosphotransfer domain XPE_02930 SM00387 Histidine kinase-like ATPases XPE_02930 SM00388 His Kinase A (phosphoacceptor) domain XPE_02930 SM00448 cheY-homologous receiver domain XPE_02940 SM00448 cheY-homologous receiver domain XPE_02940 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. XPE_02950 SM00937 XPE_02950 XPE_02955 SM00850 LytTr DNA-binding domain XPE_02980 SM00851 MGS-like domain XPE_02980 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain XPE_02990 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain XPE_03030 SM00899 XPE_03030 XPE_03050 SM00822 XPE_03050 XPE_03055 SM00841 Elongation factor P, C-terminal XPE_03055 SM01185 XPE_03055 XPE_03100 SM01007 Class II Aldolase and Adducin N-terminal domain XPE_03175 SM00100 Cyclic nucleotide-monophosphate binding domain XPE_03175 SM00419 helix_turn_helix, cAMP Regulatory protein XPE_03245 SM00342 helix_turn_helix, arabinose operon control protein XPE_03245 SM00871 Bacterial transcription activator, effector binding domain XPE_03310 SM00014 Acid phosphatase homologues XPE_03325 SM00387 Histidine kinase-like ATPases XPE_03330 SM00448 cheY-homologous receiver domain XPE_03340 SM00052 Putative diguanylate phosphodiesterase XPE_03340 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XPE_03340 SM00267 diguanylate cyclase XPE_03420 SM00646 XPE_03420 XPE_03455 SM00758 XPE_03455 XPE_03500 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain XPE_03525 SM01130 XPE_03525 XPE_03545 SM00670 Large family of predicted nucleotide-binding domains XPE_03595 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XPE_03595 SM00091 PAS domain XPE_03595 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XPE_03615 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain XPE_03630 SM00382 ATPases associated with a variety of cellular activities XPE_03670 SM00382 ATPases associated with a variety of cellular activities XPE_03680 SM01103 XPE_03680 XPE_03690 SM00257 Lysin motif XPE_03710 SM00463 Small MutS-related domain XPE_03735 SM01192 XPE_03735 XPE_03735 SM01193 XPE_03735 XPE_03760 SM00387 Histidine kinase-like ATPases XPE_03760 SM00433 TopoisomeraseII XPE_03790 SM00116 Domain in cystathionine beta-synthase and other proteins. XPE_03790 SM01091 Transporter associated domain XPE_03815 SM00382 ATPases associated with a variety of cellular activities XPE_03825 SM00729 Elongator protein 3, MiaB family, Radical SAM XPE_03985 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XPE_03985 SM00091 PAS domain XPE_03985 SM00387 Histidine kinase-like ATPases XPE_03985 SM00388 His Kinase A (phosphoacceptor) domain XPE_03985 SM00448 cheY-homologous receiver domain XPE_03990 SM00382 ATPases associated with a variety of cellular activities XPE_04000 SM00448 cheY-homologous receiver domain XPE_04005 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XPE_04005 SM00091 PAS domain XPE_04005 SM00387 Histidine kinase-like ATPases XPE_04005 SM00388 His Kinase A (phosphoacceptor) domain XPE_04005 SM00448 cheY-homologous receiver domain XPE_04010 SM00347 helix_turn_helix multiple antibiotic resistance protein XPE_04020 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XPE_04020 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XPE_04065 SM00830 Chorismate mutase type II XPE_04085 SM00240 Forkhead associated domain XPE_04105 SM00345 helix_turn_helix gluconate operon transcriptional repressor XPE_04105 SM00866 XPE_04105 XPE_04145 SM00564 beta-propeller repeat XPE_04150 SM00434 DNA Topoisomerase IV XPE_04175 SM00292 breast cancer carboxy-terminal domain XPE_04175 SM00532 Ligase N family XPE_04190 SM00771 ZipA, C-terminal domain (FtsZ-binding) XPE_04195 SM00968 SMC proteins Flexible Hinge Domain XPE_04250 SM00421 helix_turn_helix, Lux Regulon XPE_04250 SM00448 cheY-homologous receiver domain XPE_04295 SM00947 Carbonic anhydrase XPE_04325 SM00479 XPE_04325 XPE_04355 SM00981 XPE_04355 XPE_04385 SM00644 XPE_04385 XPE_04395 SM00450 Rhodanese Homology Domain XPE_04420 SM00478 endonuclease III XPE_04430 SM00947 Carbonic anhydrase XPE_04465 SM00382 ATPases associated with a variety of cellular activities XPE_04480 SM00479 XPE_04480 XPE_04485 SM00267 diguanylate cyclase XPE_04495 SM00967 RNA 2'-O ribose methyltransferase substrate binding XPE_04505 SM00316 Ribosomal protein S1-like RNA-binding domain XPE_04505 SM00357 Cold shock protein domain XPE_04505 SM00955 XPE_04505 XPE_04540 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor XPE_04550 SM01018 B12 binding domain XPE_04570 SM00354 helix_turn _helix lactose operon repressor XPE_04590 SM00984 UDP binding domain XPE_04610 SM00345 helix_turn_helix gluconate operon transcriptional repressor XPE_04615 SM00382 ATPases associated with a variety of cellular activities XPE_04645 SM00116 Domain in cystathionine beta-synthase and other proteins. XPE_04645 SM01091 Transporter associated domain XPE_04665 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. XPE_04675 SM00861 Transketolase, pyrimidine binding domain XPE_04700 SM00382 ATPases associated with a variety of cellular activities XPE_04740 SM00271 DnaJ molecular chaperone homology domain XPE_04820 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XPE_04820 SM00267 diguanylate cyclase XPE_04830 SM00267 diguanylate cyclase XPE_04950 SM00357 Cold shock protein domain XPE_04970 SM00947 Carbonic anhydrase XPE_04985 SM00382 ATPases associated with a variety of cellular activities XPE_05005 SM00347 helix_turn_helix multiple antibiotic resistance protein XPE_05035 SM00631 XPE_05035 XPE_05040 SM01217 XPE_05040 XPE_05075 SM00347 helix_turn_helix multiple antibiotic resistance protein XPE_05080 SM00342 helix_turn_helix, arabinose operon control protein XPE_05085 SM00434 DNA Topoisomerase IV XPE_05110 SM00710 Parallel beta-helix repeats XPE_05110 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses XPE_05115 SM01172 XPE_05115 XPE_05135 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. XPE_05145 SM00972 Spore Coat Protein U domain XPE_05160 SM00972 Spore Coat Protein U domain XPE_05185 SM00267 diguanylate cyclase XPE_05215 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. XPE_05255 SM00481 DNA polymerase alpha chain like domain XPE_05555 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase XPE_05560 SM00869 Autotransporter beta-domain XPE_05580 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XPE_05580 SM00267 diguanylate cyclase XPE_05615 SM00487 DEAD-like helicases superfamily XPE_05615 SM00490 helicase superfamily c-terminal domain XPE_05630 SM00357 Cold shock protein domain XPE_05665 SM01118 XPE_05665 XPE_05675 SM00448 cheY-homologous receiver domain XPE_05695 SM00358 Double-stranded RNA binding motif XPE_05695 SM00535 Ribonuclease III family XPE_05710 SM00838 Elongation factor G C-terminus XPE_05715 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. XPE_05765 SM00530 Helix-turn-helix XRE-family like proteins XPE_05790 SM00812 Alpha-L-fucosidase XPE_05795 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XPE_05795 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XPE_05830 SM00533 DNA-binding domain of DNA mismatch repair MUTS family XPE_05830 SM00534 ATPase domain of DNA mismatch repair MUTS family XPE_05845 SM00363 S4 RNA-binding domain XPE_05895 SM00382 ATPases associated with a variety of cellular activities XPE_05895 SM00962 SRP54-type protein, GTPase domain XPE_05895 SM00963 SRP54-type protein, helical bundle domain XPE_05910 SM00813 Alpha-L-arabinofuranosidase C-terminus XPE_05915 SM00448 cheY-homologous receiver domain XPE_05920 SM00091 PAS domain XPE_05920 SM00387 Histidine kinase-like ATPases XPE_05920 SM00388 His Kinase A (phosphoacceptor) domain XPE_05925 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XPE_05925 SM00387 Histidine kinase-like ATPases XPE_05925 SM00388 His Kinase A (phosphoacceptor) domain XPE_05925 SM00448 cheY-homologous receiver domain XPE_05930 SM00138 Methyltransferase, chemotaxis proteins XPE_05940 SM00387 Histidine kinase-like ATPases XPE_05940 SM00388 His Kinase A (phosphoacceptor) domain XPE_05940 SM00448 cheY-homologous receiver domain XPE_05965 SM00387 Histidine kinase-like ATPases XPE_05965 SM00388 His Kinase A (phosphoacceptor) domain XPE_05965 SM00448 cheY-homologous receiver domain XPE_05970 SM00387 Histidine kinase-like ATPases XPE_05970 SM00388 His Kinase A (phosphoacceptor) domain XPE_05980 SM00387 Histidine kinase-like ATPases XPE_06005 SM00342 helix_turn_helix, arabinose operon control protein XPE_06010 SM00862 Transcriptional regulatory protein, C terminal XPE_06020 SM00382 ATPases associated with a variety of cellular activities XPE_06025 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. XPE_06070 SM00904 Riboflavin kinase XPE_06170 SM00244 prohibitin homologues XPE_06190 SM00478 endonuclease III XPE_06205 SM00421 helix_turn_helix, Lux Regulon XPE_06205 SM00448 cheY-homologous receiver domain XPE_06245 SM00387 Histidine kinase-like ATPases XPE_06245 SM00388 His Kinase A (phosphoacceptor) domain XPE_06250 SM00448 cheY-homologous receiver domain XPE_06250 SM00862 Transcriptional regulatory protein, C terminal XPE_06290 SM00382 ATPases associated with a variety of cellular activities XPE_06325 SM01060 XPE_06325 XPE_06350 SM00091 PAS domain XPE_06350 SM00342 helix_turn_helix, arabinose operon control protein XPE_06385 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. XPE_06400 SM00481 DNA polymerase alpha chain like domain XPE_06420 SM00966 SpoVT / AbrB like domain XPE_06440 SM00974 XPE_06440 XPE_06455 SM01092 CO dehydrogenase flavoprotein C-terminal domain XPE_06460 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain XPE_06470 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. XPE_06475 SM00052 Putative diguanylate phosphodiesterase XPE_06530 SM00855 Phosphoglycerate mutase family XPE_06550 SM00220 Serine/Threonine protein kinases, catalytic domain XPE_06570 SM00487 DEAD-like helicases superfamily XPE_06570 SM00490 helicase superfamily c-terminal domain XPE_06605 SM00822 XPE_06605 XPE_06620 SM00788 Adenylosuccinate synthetase XPE_06625 SM01321 XPE_06625 XPE_06630 SM00244 prohibitin homologues XPE_06635 SM00244 prohibitin homologues XPE_06640 SM00448 cheY-homologous receiver domain XPE_06645 SM00271 DnaJ molecular chaperone homology domain XPE_06685 SM01359 XPE_06685 XPE_06685 SM01360 XPE_06685 XPE_06730 SM00382 ATPases associated with a variety of cellular activities XPE_06770 SM00825 Beta-ketoacyl synthase XPE_06780 SM00822 XPE_06780 XPE_06785 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. XPE_06825 SM00382 ATPases associated with a variety of cellular activities XPE_06835 SM00460 Transglutaminase/protease-like homologues XPE_06850 SM00493 XPE_06850 XPE_06860 SM00382 ATPases associated with a variety of cellular activities XPE_06875 SM00530 Helix-turn-helix XRE-family like proteins XPE_06960 SM00530 Helix-turn-helix XRE-family like proteins XPE_06995 SM00100 Cyclic nucleotide-monophosphate binding domain XPE_07030 SM00729 Elongator protein 3, MiaB family, Radical SAM XPE_07035 SM00849 Metallo-beta-lactamase superfamily XPE_07055 SM00530 Helix-turn-helix XRE-family like proteins XPE_07075 SM00530 Helix-turn-helix XRE-family like proteins XPE_07105 SM00331 Sigma factor PP2C-like phosphatases XPE_07105 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain XPE_07110 SM00479 XPE_07110 XPE_07125 SM00849 Metallo-beta-lactamase superfamily XPE_07130 SM00257 Lysin motif XPE_07155 SM00411 bacterial (prokaryotic) histone like domain XPE_07160 SM00382 ATPases associated with a variety of cellular activities XPE_07160 SM00464 Found in ATP-dependent protease La (LON) XPE_07165 SM00382 ATPases associated with a variety of cellular activities XPE_07165 SM00994 ClpX C4-type zinc finger XPE_07165 SM01086 C-terminal, D2-small domain, of ClpB protein XPE_07185 SM00091 PAS domain XPE_07185 SM00387 Histidine kinase-like ATPases XPE_07215 SM01329 XPE_07215 XPE_07235 SM00448 cheY-homologous receiver domain XPE_07235 SM00862 Transcriptional regulatory protein, C terminal XPE_07240 SM00091 PAS domain XPE_07240 SM00387 Histidine kinase-like ATPases XPE_07240 SM00388 His Kinase A (phosphoacceptor) domain XPE_07260 SM00014 Acid phosphatase homologues XPE_07310 SM00855 Phosphoglycerate mutase family XPE_07330 SM00829 Enoylreductase XPE_07345 SM00382 ATPases associated with a variety of cellular activities XPE_07390 SM00829 Enoylreductase XPE_07430 SM00838 Elongation factor G C-terminus XPE_07480 SM00662 RNA polymerases D XPE_07485 SM00363 S4 RNA-binding domain XPE_07485 SM01390 XPE_07485 XPE_07545 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. XPE_07550 SM01374 XPE_07550 XPE_07570 SM00322 K homology RNA-binding domain XPE_07585 SM01382 XPE_07585 XPE_07585 SM01383 XPE_07585 XPE_07605 SM01403 XPE_07605 XPE_07625 SM00838 Elongation factor G C-terminus XPE_07625 SM00889 Elongation factor G, domain IV XPE_07640 SM00663 RNA polymerase I subunit A N-terminus XPE_07665 SM00649 Ribosomal protein L11/L12 XPE_07670 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. XPE_07670 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. XPE_07720 SM01400 XPE_07720 XPE_07740 SM00028 Tetratricopeptide repeats XPE_07750 SM00937 XPE_07750 XPE_07755 SM00028 Tetratricopeptide repeats XPE_07765 SM00852 Probable molybdopterin binding domain XPE_07875 SM01002 Alanine dehydrogenase/PNT, C-terminal domain XPE_07875 SM01003 Alanine dehydrogenase/PNT, N-terminal domain XPE_07890 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs XPE_07890 SM00475 5'-3' exonuclease XPE_07960 SM00421 helix_turn_helix, Lux Regulon XPE_07965 SM00387 Histidine kinase-like ATPases XPE_07965 SM00388 His Kinase A (phosphoacceptor) domain XPE_07965 SM00448 cheY-homologous receiver domain XPE_07970 SM00448 cheY-homologous receiver domain XPE_08045 SM00347 helix_turn_helix multiple antibiotic resistance protein XPE_08080 SM00345 helix_turn_helix gluconate operon transcriptional repressor XPE_08080 SM00895 XPE_08080 XPE_08145 SM00650 Ribosomal RNA adenine dimethylases XPE_08205 SM00387 Histidine kinase-like ATPases XPE_08205 SM00388 His Kinase A (phosphoacceptor) domain XPE_08210 SM00448 cheY-homologous receiver domain XPE_08210 SM00862 Transcriptional regulatory protein, C terminal XPE_08220 SM00382 ATPases associated with a variety of cellular activities XPE_08240 SM00382 ATPases associated with a variety of cellular activities XPE_08365 SM00996 S-adenosyl-L-homocysteine hydrolase XPE_08365 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain XPE_08400 SM00642 Alpha-amylase domain XPE_08415 SM00944 Pro-kumamolisin, activation domain XPE_08420 SM00829 Enoylreductase XPE_08450 SM00957 SecA DEAD-like domain XPE_08450 SM00958 SecA preprotein cross-linking domain XPE_08470 SM00864 Tubulin/FtsZ family, GTPase domain XPE_08470 SM00865 Tubulin/FtsZ family, C-terminal domain XPE_08475 SM00842 Cell division protein FtsA XPE_08590 SM00448 cheY-homologous receiver domain XPE_08590 SM00862 Transcriptional regulatory protein, C terminal XPE_08595 SM00387 Histidine kinase-like ATPases XPE_08595 SM00388 His Kinase A (phosphoacceptor) domain XPE_08625 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain XPE_08695 SM00382 ATPases associated with a variety of cellular activities XPE_08715 SM00829 Enoylreductase XPE_08735 SM00448 cheY-homologous receiver domain XPE_08735 SM00862 Transcriptional regulatory protein, C terminal XPE_08740 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XPE_08740 SM00387 Histidine kinase-like ATPases XPE_08740 SM00388 His Kinase A (phosphoacceptor) domain XPE_08820 SM00354 helix_turn _helix lactose operon repressor XPE_08830 SM00345 helix_turn_helix gluconate operon transcriptional repressor XPE_08830 SM00866 XPE_08830 XPE_08880 SM00382 ATPases associated with a variety of cellular activities XPE_08905 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. XPE_08935 SM00387 Histidine kinase-like ATPases XPE_08935 SM00388 His Kinase A (phosphoacceptor) domain XPE_08935 SM00448 cheY-homologous receiver domain XPE_08940 SM00448 cheY-homologous receiver domain XPE_08945 SM00387 Histidine kinase-like ATPases XPE_08945 SM00388 His Kinase A (phosphoacceptor) domain XPE_08950 SM00749 bacterial OsmY and nodulation domain XPE_08960 SM01350 XPE_08960 XPE_09015 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. XPE_09015 SM00245 tail specific protease XPE_09020 SM00729 Elongator protein 3, MiaB family, Radical SAM XPE_09040 SM00936 Penicillin-binding protein 5, C-terminal domain XPE_09060 SM00710 Parallel beta-helix repeats XPE_09090 SM00268 Actin XPE_09100 SM00382 ATPases associated with a variety of cellular activities XPE_09110 SM00829 Enoylreductase XPE_09125 SM00062 Bacterial periplasmic substrate-binding proteins XPE_09125 SM00248 ankyrin repeats XPE_09130 SM00564 beta-propeller repeat XPE_09150 SM01263 XPE_09150 XPE_09155 SM00267 diguanylate cyclase XPE_09185 SM00382 ATPases associated with a variety of cellular activities XPE_09185 SM01086 C-terminal, D2-small domain, of ClpB protein XPE_09275 SM00448 cheY-homologous receiver domain XPE_09275 SM00850 LytTr DNA-binding domain XPE_09305 SM00267 diguanylate cyclase XPE_09315 SM00637 XPE_09315 XPE_09320 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XPE_09320 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XPE_09320 SM01049 XPE_09320 XPE_09325 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XPE_09325 SM00091 PAS domain XPE_09325 SM00267 diguanylate cyclase XPE_09335 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XPE_09345 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain XPE_09345 SM01232 XPE_09345 XPE_09395 SM00062 Bacterial periplasmic substrate-binding proteins XPE_09430 SM00267 diguanylate cyclase XPE_09585 SM01321 XPE_09585 XPE_09670 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XPE_09670 SM00331 Sigma factor PP2C-like phosphatases XPE_09690 SM00345 helix_turn_helix gluconate operon transcriptional repressor XPE_09690 SM00895 XPE_09690 XPE_09700 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. XPE_09750 SM00867 YceI-like domain XPE_09775 SM00944 Pro-kumamolisin, activation domain XPE_09835 SM00883 Chaperonin 10 Kd subunit XPE_09880 SM00878 Biotin carboxylase C-terminal domain XPE_09910 SM00530 Helix-turn-helix XRE-family like proteins XPE_09935 SM00563 Phosphate acyltransferases XPE_09955 SM00195 Dual specificity phosphatase, catalytic domain XPE_09970 SM00798 AICARFT/IMPCHase bienzyme XPE_09970 SM00851 MGS-like domain XPE_09980 SM01209 XPE_09980 XPE_09980 SM01210 XPE_09980 XPE_10000 SM00563 Phosphate acyltransferases XPE_10055 SM00052 Putative diguanylate phosphodiesterase XPE_10055 SM00267 diguanylate cyclase XPE_10055 SM00448 cheY-homologous receiver domain XPE_10060 SM00073 Histidine Phosphotransfer domain XPE_10060 SM00387 Histidine kinase-like ATPases XPE_10060 SM00388 His Kinase A (phosphoacceptor) domain XPE_10060 SM00448 cheY-homologous receiver domain XPE_10115 SM00100 Cyclic nucleotide-monophosphate binding domain XPE_10115 SM00419 helix_turn_helix, cAMP Regulatory protein XPE_10135 SM00903 Flavin reductase like domain XPE_10160 SM00046 Diacylglycerol kinase catalytic domain (presumed) XPE_10175 SM00271 DnaJ molecular chaperone homology domain XPE_10275 SM00347 helix_turn_helix multiple antibiotic resistance protein XPE_10295 SM00237 Domains in Na-Ca exchangers and integrin-beta4 XPE_10305 SM00861 Transketolase, pyrimidine binding domain XPE_10310 SM00326 Src homology 3 domains XPE_10330 SM00487 DEAD-like helicases superfamily XPE_10330 SM00490 helicase superfamily c-terminal domain XPE_10345 SM00822 XPE_10345 XPE_10395 SM00642 Alpha-amylase domain XPE_10405 SM00642 Alpha-amylase domain XPE_10415 SM00642 Alpha-amylase domain XPE_10420 SM00642 Alpha-amylase domain XPE_10430 SM00267 diguanylate cyclase XPE_10510 SM01126 XPE_10510 XPE_10530 SM00382 ATPases associated with a variety of cellular activities XPE_10625 SM00369 Leucine-rich repeats, typical (most populated) subfamily XPE_10650 SM00729 Elongator protein 3, MiaB family, Radical SAM XPE_10650 SM00876 Biotin and Thiamin Synthesis associated domain XPE_10710 SM01228 XPE_10710 XPE_10725 SM00090 RIO-like kinase XPE_10730 SM00346 helix_turn_helix isocitrate lyase regulation XPE_10755 SM00998 Adenylosuccinate lyase C-terminus XPE_10775 SM00882 Coenzyme A transferase XPE_10780 SM00882 Coenzyme A transferase XPE_10795 SM00420 helix_turn_helix, Deoxyribose operon repressor XPE_10795 SM01134 XPE_10795 XPE_10825 SM00342 helix_turn_helix, arabinose operon control protein XPE_10845 SM00347 helix_turn_helix multiple antibiotic resistance protein XPE_10850 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. XPE_11060 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XPE_11060 SM00387 Histidine kinase-like ATPases XPE_11060 SM00388 His Kinase A (phosphoacceptor) domain XPE_11065 SM00448 cheY-homologous receiver domain XPE_11065 SM00862 Transcriptional regulatory protein, C terminal XPE_11100 SM00422 helix_turn_helix, mercury resistance XPE_11240 SM00487 DEAD-like helicases superfamily XPE_11240 SM00490 helicase superfamily c-terminal domain XPE_11240 SM00847 Helicase associated domain (HA2) Add an annotation XPE_11265 SM00829 Enoylreductase XPE_11290 SM00347 helix_turn_helix multiple antibiotic resistance protein XPE_11315 SM00833 Cobalamin synthesis protein cobW C-terminal domain XPE_11360 SM00953 XPE_11360 XPE_11385 SM00878 Biotin carboxylase C-terminal domain XPE_11410 SM00100 Cyclic nucleotide-monophosphate binding domain XPE_11410 SM00267 diguanylate cyclase XPE_11435 SM00342 helix_turn_helix, arabinose operon control protein XPE_11470 SM00563 Phosphate acyltransferases XPE_11575 SM00382 ATPases associated with a variety of cellular activities XPE_11575 SM00448 cheY-homologous receiver domain XPE_11580 SM00387 Histidine kinase-like ATPases XPE_11580 SM00388 His Kinase A (phosphoacceptor) domain XPE_11610 SM00450 Rhodanese Homology Domain XPE_11670 SM00382 ATPases associated with a variety of cellular activities XPE_11670 SM00448 cheY-homologous receiver domain XPE_11675 SM00387 Histidine kinase-like ATPases XPE_11675 SM00388 His Kinase A (phosphoacceptor) domain XPE_11685 SM00938 Nitrogen regulatory protein P-II XPE_11690 SM01230 XPE_11690 XPE_11710 SM00829 Enoylreductase XPE_11720 SM00028 Tetratricopeptide repeats XPE_11735 SM00563 Phosphate acyltransferases XPE_11745 SM00155 Phospholipase D. Active site motifs. XPE_11750 SM00867 YceI-like domain XPE_11755 SM00855 Phosphoglycerate mutase family XPE_11815 SM00382 ATPases associated with a variety of cellular activities XPE_11830 SM00382 ATPases associated with a variety of cellular activities XPE_11855 SM00344 helix_turn_helix ASNC type XPE_11890 SM00354 helix_turn _helix lactose operon repressor XPE_11945 SM00642 Alpha-amylase domain XPE_11950 SM00642 Alpha-amylase domain XPE_11955 SM00642 Alpha-amylase domain XPE_11960 SM00347 helix_turn_helix multiple antibiotic resistance protein XPE_11995 SM00479 XPE_11995 XPE_12045 SM00862 Transcriptional regulatory protein, C terminal XPE_12065 SM00421 helix_turn_helix, Lux Regulon XPE_12065 SM00448 cheY-homologous receiver domain XPE_12095 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen XPE_12340 SM00822 XPE_12340 XPE_12345 SM00822 XPE_12345 XPE_12370 SM00487 DEAD-like helicases superfamily XPE_12370 SM00490 helicase superfamily c-terminal domain XPE_12480 SM00829 Enoylreductase XPE_12525 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. XPE_12525 SM00245 tail specific protease XPE_12555 SM00729 Elongator protein 3, MiaB family, Radical SAM XPE_12570 SM00155 Phospholipase D. Active site motifs. XPE_12610 SM00028 Tetratricopeptide repeats XPE_12625 SM00387 Histidine kinase-like ATPases XPE_12625 SM00433 TopoisomeraseII XPE_12635 SM00480 DNA polymerase III beta subunit XPE_12640 SM00382 ATPases associated with a variety of cellular activities XPE_12640 SM00760 Bacterial dnaA protein helix-turn-helix domain XPE_12665 SM00028 Tetratricopeptide repeats XPE_12675 SM00014 Acid phosphatase homologues XPE_12735 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XPE_12735 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XPE_12735 SM00091 PAS domain XPE_12735 SM00267 diguanylate cyclase XPE_12780 SM00829 Enoylreductase XPE_12830 SM00382 ATPases associated with a variety of cellular activities XPE_12860 SM00237 Domains in Na-Ca exchangers and integrin-beta4 XPE_12860 SM00736 Dystroglycan-type cadherin-like domains. XPE_12860 SM00869 Autotransporter beta-domain XPE_12885 SM00530 Helix-turn-helix XRE-family like proteins XPE_12930 SM00822 XPE_12930 XPE_13045 SM00155 Phospholipase D. Active site motifs. XPE_13095 SM00347 helix_turn_helix multiple antibiotic resistance protein XPE_13150 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XPE_13150 SM00091 PAS domain XPE_13185 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain XPE_13185 SM01232 XPE_13185 XPE_13200 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XPE_13200 SM00388 His Kinase A (phosphoacceptor) domain XPE_13240 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family XPE_13260 SM00354 helix_turn _helix lactose operon repressor XPE_13270 SM00563 Phosphate acyltransferases XPE_13280 SM00829 Enoylreductase XPE_13330 SM00633 Glycosyl hydrolase family 10 XPE_13340 SM00633 Glycosyl hydrolase family 10 XPE_13355 SM00633 Glycosyl hydrolase family 10 XPE_13380 SM01007 Class II Aldolase and Adducin N-terminal domain XPE_13410 SM00612 XPE_13410 XPE_13440 SM00758 XPE_13440 XPE_13440 SM01217 XPE_13440 XPE_13450 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain XPE_13465 SM00354 helix_turn _helix lactose operon repressor XPE_13545 SM00382 ATPases associated with a variety of cellular activities XPE_13555 SM00836 DALR anticodon binding domain XPE_13640 SM00564 beta-propeller repeat XPE_13675 SM00091 PAS domain XPE_13675 SM00387 Histidine kinase-like ATPases XPE_13675 SM00388 His Kinase A (phosphoacceptor) domain XPE_13675 SM00448 cheY-homologous receiver domain XPE_13690 SM00346 helix_turn_helix isocitrate lyase regulation XPE_13705 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain XPE_13770 SM00421 helix_turn_helix, Lux Regulon XPE_13770 SM00448 cheY-homologous receiver domain XPE_13905 SM00155 Phospholipase D. Active site motifs. XPE_13930 SM01266 XPE_13930 XPE_13940 SM00342 helix_turn_helix, arabinose operon control protein XPE_13985 SM00382 ATPases associated with a variety of cellular activities XPE_13985 SM01086 C-terminal, D2-small domain, of ClpB protein XPE_14020 SM00915 Jacalin-like lectin domain XPE_14030 SM00965 Secretin and TonB N terminus short domain XPE_14055 SM00220 Serine/Threonine protein kinases, catalytic domain XPE_14065 SM00028 Tetratricopeptide repeats XPE_14080 SM00240 Forkhead associated domain XPE_14115 SM00331 Sigma factor PP2C-like phosphatases XPE_14115 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain XPE_14135 SM00912 haemagglutination activity domain XPE_14150 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs XPE_14150 SM00474 3'-5' exonuclease XPE_14150 SM00475 5'-3' exonuclease XPE_14150 SM00482 DNA polymerase A domain XPE_14210 SM00563 Phosphate acyltransferases XPE_14255 SM00822 XPE_14255 XPE_14285 SM00825 Beta-ketoacyl synthase XPE_14295 SM00248 ankyrin repeats XPE_14320 SM01057 Eukaryotic-type carbonic anhydrase XPE_14330 SM00116 Domain in cystathionine beta-synthase and other proteins. XPE_14330 SM00924 MgtE intracellular N domain XPE_14335 SM00881 CoA binding domain XPE_14400 SM00382 ATPases associated with a variety of cellular activities XPE_14430 SM00530 Helix-turn-helix XRE-family like proteins XPE_14440 SM00382 ATPases associated with a variety of cellular activities XPE_14460 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. XPE_14505 SM01004 Delta-aminolevulinic acid dehydratase XPE_14510 SM00477 DNA/RNA non-specific endonuclease XPE_14510 SM00892 DNA/RNA non-specific endonuclease XPE_14540 SM00491 XPE_14540 XPE_14550 SM01060 XPE_14550 XPE_14555 SM00248 ankyrin repeats XPE_14585 SM00448 cheY-homologous receiver domain XPE_14585 SM00862 Transcriptional regulatory protein, C terminal XPE_14590 SM00387 Histidine kinase-like ATPases XPE_14590 SM00388 His Kinase A (phosphoacceptor) domain XPE_14660 SM00960 Roadblock/LC7 domain XPE_14690 SM00849 Metallo-beta-lactamase superfamily XPE_14735 SM00382 ATPases associated with a variety of cellular activities XPE_14750 SM00421 helix_turn_helix, Lux Regulon XPE_14750 SM00448 cheY-homologous receiver domain XPE_14765 SM01060 XPE_14765 XPE_14810 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. XPE_14830 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XPE_14830 SM00387 Histidine kinase-like ATPases XPE_14830 SM00388 His Kinase A (phosphoacceptor) domain XPE_14835 SM00448 cheY-homologous receiver domain XPE_14835 SM00862 Transcriptional regulatory protein, C terminal XPE_14880 SM00244 prohibitin homologues XPE_14910 SM00052 Putative diguanylate phosphodiesterase XPE_14925 SM00382 ATPases associated with a variety of cellular activities XPE_14935 SM00938 Nitrogen regulatory protein P-II XPE_14975 SM00823 Phosphopantetheine attachment site XPE_14975 SM00824 Thioesterase XPE_15005 SM00836 DALR anticodon binding domain XPE_15005 SM01016 Arginyl tRNA synthetase N terminal dom XPE_15035 SM01259 XPE_15035 XPE_15055 SM00470 ParB-like nuclease domain XPE_15100 SM00363 S4 RNA-binding domain XPE_15200 SM00400 zinc finger XPE_15200 SM00493 XPE_15200 XPE_15200 SM00766 DNA primase DnaG DnaB-binding XPE_15230 SM00905 Dihydroneopterin aldolase XPE_15235 SM01217 XPE_15235 XPE_15270 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain XPE_15280 SM00644 XPE_15280 XPE_15330 SM01150 XPE_15330 XPE_15360 SM00257 Lysin motif XPE_15400 SM00357 Cold shock protein domain XPE_15400 SM00382 ATPases associated with a variety of cellular activities XPE_15400 SM00959 Rho termination factor, N-terminal domain XPE_15410 SM00487 DEAD-like helicases superfamily XPE_15410 SM00490 helicase superfamily c-terminal domain XPE_15415 SM00382 ATPases associated with a variety of cellular activities XPE_15425 SM00448 cheY-homologous receiver domain XPE_15430 SM00986 Uracil DNA glycosylase superfamily XPE_15430 SM00987 UreE urease accessory protein, C-terminal domain XPE_15465 SM00487 DEAD-like helicases superfamily XPE_15465 SM00490 helicase superfamily c-terminal domain XPE_15525 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain XPE_15525 SM00437 Bacterial DNA topoisomerase I DNA-binding domain XPE_15525 SM00493 XPE_15525 XPE_15550 SM00257 Lysin motif XPE_15725 SM00646 XPE_15725 XPE_15895 SM00822 XPE_15895 XPE_15975 SM00477 DNA/RNA non-specific endonuclease XPE_15975 SM00892 DNA/RNA non-specific endonuclease XPE_15990 SM00631 XPE_15990 XPE_15995 SM00382 ATPases associated with a variety of cellular activities XPE_16070 SM00382 ATPases associated with a variety of cellular activities XPE_16130 SM00382 ATPases associated with a variety of cellular activities XPE_16130 SM00448 cheY-homologous receiver domain XPE_16140 SM00448 cheY-homologous receiver domain XPE_16145 SM00091 PAS domain XPE_16145 SM00138 Methyltransferase, chemotaxis proteins XPE_16145 SM00911 HWE histidine kinase XPE_16190 SM00387 Histidine kinase-like ATPases XPE_16195 SM00448 cheY-homologous receiver domain XPE_16195 SM00850 LytTr DNA-binding domain XPE_16255 SM00729 Elongator protein 3, MiaB family, Radical SAM XPE_16260 SM00986 Uracil DNA glycosylase superfamily XPE_16260 SM00987 UreE urease accessory protein, C-terminal domain XPE_16265 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. XPE_16280 SM00382 ATPases associated with a variety of cellular activities XPE_16335 SM00344 helix_turn_helix ASNC type XPE_16345 SM01005 Alanine racemase, C-terminal domain XPE_16365 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XPE_16365 SM00091 PAS domain XPE_16365 SM00387 Histidine kinase-like ATPases XPE_16365 SM00388 His Kinase A (phosphoacceptor) domain XPE_16365 SM00448 cheY-homologous receiver domain XPE_16420 SM00387 Histidine kinase-like ATPases XPE_16420 SM00388 His Kinase A (phosphoacceptor) domain XPE_16420 SM00448 cheY-homologous receiver domain XPE_16440 SM00382 ATPases associated with a variety of cellular activities XPE_16440 SM00930 XPE_16440 XPE_16475 SM00986 Uracil DNA glycosylase superfamily XPE_16475 SM00987 UreE urease accessory protein, C-terminal domain XPE_16545 SM00382 ATPases associated with a variety of cellular activities XPE_16555 SM00830 Chorismate mutase type II XPE_16570 SM00387 Histidine kinase-like ATPases XPE_16575 SM00382 ATPases associated with a variety of cellular activities XPE_16575 SM00448 cheY-homologous receiver domain XPE_16595 SM00382 ATPases associated with a variety of cellular activities XPE_16665 SM00825 Beta-ketoacyl synthase XPE_16695 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XPE_16715 SM00487 DEAD-like helicases superfamily XPE_16715 SM00490 helicase superfamily c-terminal domain XPE_16755 SM00116 Domain in cystathionine beta-synthase and other proteins. XPE_16770 SM00382 ATPases associated with a variety of cellular activities XPE_16815 SM00893 Electron transfer flavoprotein domain XPE_16820 SM00893 Electron transfer flavoprotein domain XPE_16845 SM00984 UDP binding domain XPE_16860 SM00882 Coenzyme A transferase XPE_16865 SM00882 Coenzyme A transferase XPE_16905 SM00382 ATPases associated with a variety of cellular activities XPE_16920 SM00528 Domain in histone-like proteins of HNS family XPE_16950 SM00656 XPE_16950 XPE_17025 SM01211 XPE_17025 XPE_17050 SM00382 ATPases associated with a variety of cellular activities XPE_17115 SM00345 helix_turn_helix gluconate operon transcriptional repressor XPE_17115 SM00866 XPE_17115 XPE_17190 SM00028 Tetratricopeptide repeats XPE_17270 SM00450 Rhodanese Homology Domain XPE_17300 SM01154 XPE_17300 XPE_17310 SM00642 Alpha-amylase domain XPE_17325 SM00354 helix_turn _helix lactose operon repressor XPE_17330 SM00822 XPE_17330 XPE_17350 SM00448 cheY-homologous receiver domain XPE_17350 SM00862 Transcriptional regulatory protein, C terminal XPE_17355 SM00387 Histidine kinase-like ATPases XPE_17355 SM00388 His Kinase A (phosphoacceptor) domain XPE_17365 SM00421 helix_turn_helix, Lux Regulon XPE_17365 SM00448 cheY-homologous receiver domain XPE_17400 SM00387 Histidine kinase-like ATPases XPE_17400 SM00388 His Kinase A (phosphoacceptor) domain XPE_17400 SM00448 cheY-homologous receiver domain XPE_17415 SM00919 Malic enzyme, NAD binding domain XPE_17415 SM01274 XPE_17415 XPE_17470 SM00267 diguanylate cyclase XPE_17490 SM01329 XPE_17490 XPE_17495 SM00917 LeuA allosteric (dimerisation) domain XPE_17525 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XPE_17545 SM00862 Transcriptional regulatory protein, C terminal XPE_17550 SM00342 helix_turn_helix, arabinose operon control protein XPE_17600 SM00464 Found in ATP-dependent protease La (LON) XPE_17670 SM00028 Tetratricopeptide repeats XPE_17670 SM00382 ATPases associated with a variety of cellular activities XPE_17670 SM00421 helix_turn_helix, Lux Regulon XPE_17755 SM01011 Aminopeptidase P, N-terminal domain XPE_17780 SM00729 Elongator protein 3, MiaB family, Radical SAM XPE_17805 SM00072 Guanylate kinase homologues. XPE_17810 SM01409 XPE_17810 XPE_17815 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. XPE_17815 SM00954 Region found in RelA / SpoT proteins XPE_17825 SM00487 DEAD-like helicases superfamily XPE_17825 SM00490 helicase superfamily c-terminal domain XPE_17875 SM00965 Secretin and TonB N terminus short domain XPE_17880 SM00382 ATPases associated with a variety of cellular activities XPE_17895 SM00327 von Willebrand factor (vWF) type A domain XPE_17900 SM00028 Tetratricopeptide repeats XPE_17900 SM00327 von Willebrand factor (vWF) type A domain XPE_17920 SM00861 Transketolase, pyrimidine binding domain XPE_17970 SM00382 ATPases associated with a variety of cellular activities XPE_18010 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain XPE_18050 SM00506 Appr-1"-p processing enzyme XPE_18090 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XPE_18090 SM00387 Histidine kinase-like ATPases XPE_18165 SM00967 RNA 2'-O ribose methyltransferase substrate binding XPE_18195 SM00354 helix_turn _helix lactose operon repressor XPE_18250 SM00869 Autotransporter beta-domain XPE_18260 SM00318 Staphylococcal nuclease homologues XPE_18270 SM00528 Domain in histone-like proteins of HNS family XPE_18280 SM00642 Alpha-amylase domain XPE_18295 SM00448 cheY-homologous receiver domain XPE_18295 SM00862 Transcriptional regulatory protein, C terminal XPE_18300 SM00387 Histidine kinase-like ATPases XPE_18300 SM00388 His Kinase A (phosphoacceptor) domain XPE_18360 SM00382 ATPases associated with a variety of cellular activities XPE_18360 SM00448 cheY-homologous receiver domain XPE_18365 SM00387 Histidine kinase-like ATPases XPE_18365 SM00388 His Kinase A (phosphoacceptor) domain XPE_18375 SM00881 CoA binding domain XPE_18425 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XPE_18430 SM00564 beta-propeller repeat XPE_18500 SM00382 ATPases associated with a variety of cellular activities XPE_18500 SM01086 C-terminal, D2-small domain, of ClpB protein XPE_18550 SM00855 Phosphoglycerate mutase family XPE_18660 SM00382 ATPases associated with a variety of cellular activities XPE_18705 SM00834 Putative regulatory protein XPE_18725 SM00458 Ricin-type beta-trefoil XPE_18755 SM00278 Helix-hairpin-helix DNA-binding motif class 1 XPE_18765 SM00860 SMI1 / KNR4 family XPE_18770 SM00382 ATPases associated with a variety of cellular activities XPE_18825 SM00091 PAS domain XPE_18825 SM00911 HWE histidine kinase XPE_18830 SM00448 cheY-homologous receiver domain XPE_18845 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XPE_18845 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XPE_18860 SM00363 S4 RNA-binding domain XPE_18875 SM00448 cheY-homologous receiver domain XPE_18885 SM00341 Helicase and RNase D C-terminal XPE_18885 SM00487 DEAD-like helicases superfamily XPE_18885 SM00490 helicase superfamily c-terminal domain XPE_18885 SM00956 XPE_18885 XPE_18895 SM00382 ATPases associated with a variety of cellular activities XPE_18895 SM00487 DEAD-like helicases superfamily XPE_18895 SM00490 helicase superfamily c-terminal domain XPE_18895 SM00847 Helicase associated domain (HA2) Add an annotation XPE_18950 SM00954 Region found in RelA / SpoT proteins XPE_18980 SM00491 XPE_18980 XPE_19030 SM00448 cheY-homologous receiver domain XPE_19035 SM00448 cheY-homologous receiver domain XPE_19040 SM00260 Two component signalling adaptor domain XPE_19045 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XPE_19050 SM00073 Histidine Phosphotransfer domain XPE_19050 SM00260 Two component signalling adaptor domain XPE_19050 SM00387 Histidine kinase-like ATPases XPE_19050 SM00448 cheY-homologous receiver domain XPE_19050 SM01231 XPE_19050 XPE_19060 SM00260 Two component signalling adaptor domain XPE_19085 SM00327 von Willebrand factor (vWF) type A domain XPE_19100 SM00369 Leucine-rich repeats, typical (most populated) subfamily XPE_19145 SM01149 XPE_19145 XPE_19150 SM00758 XPE_19150 XPE_19150 SM01217 XPE_19150 XPE_19165 SM00636 XPE_19165 XPE_19170 SM00812 Alpha-L-fucosidase XPE_19295 SM00116 Domain in cystathionine beta-synthase and other proteins. XPE_19355 SM00867 YceI-like domain XPE_19365 SM00867 YceI-like domain XPE_19370 SM00387 Histidine kinase-like ATPases XPE_19370 SM00388 His Kinase A (phosphoacceptor) domain XPE_19370 SM00448 cheY-homologous receiver domain XPE_19375 SM00387 Histidine kinase-like ATPases XPE_19375 SM00388 His Kinase A (phosphoacceptor) domain XPE_19375 SM00448 cheY-homologous receiver domain XPE_19380 SM00387 Histidine kinase-like ATPases XPE_19380 SM00388 His Kinase A (phosphoacceptor) domain XPE_19380 SM00448 cheY-homologous receiver domain XPE_19385 SM00387 Histidine kinase-like ATPases XPE_19385 SM00388 His Kinase A (phosphoacceptor) domain XPE_19385 SM00448 cheY-homologous receiver domain XPE_19460 SM00422 helix_turn_helix, mercury resistance XPE_19495 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. XPE_19510 SM00849 Metallo-beta-lactamase superfamily XPE_19555 SM00421 helix_turn_helix, Lux Regulon XPE_19575 SM00656 XPE_19575 XPE_19605 SM00924 MgtE intracellular N domain XPE_19655 SM00382 ATPases associated with a variety of cellular activities XPE_19675 SM00116 Domain in cystathionine beta-synthase and other proteins. XPE_19765 SM00054 EF-hand, calcium binding motif XPE_19795 SM00671 Sel1-like repeats. XPE_19800 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. XPE_19830 SM00382 ATPases associated with a variety of cellular activities XPE_19845 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain XPE_19875 SM00411 bacterial (prokaryotic) histone like domain XPE_19890 SM00382 ATPases associated with a variety of cellular activities XPE_19930 SM00732 Likely ribonuclease with RNase H fold. XPE_20000 SM00267 diguanylate cyclase XPE_20005 SM00829 Enoylreductase XPE_20015 SM01092 CO dehydrogenase flavoprotein C-terminal domain XPE_20020 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain XPE_20050 SM00248 ankyrin repeats XPE_20110 SM00855 Phosphoglycerate mutase family XPE_20125 SM00155 Phospholipase D. Active site motifs. XPE_20130 SM00448 cheY-homologous receiver domain XPE_20135 SM00138 Methyltransferase, chemotaxis proteins XPE_20140 SM00052 Putative diguanylate phosphodiesterase XPE_20140 SM00448 cheY-homologous receiver domain XPE_20145 SM00260 Two component signalling adaptor domain XPE_20150 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XPE_20150 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XPE_20160 SM00073 Histidine Phosphotransfer domain XPE_20160 SM00260 Two component signalling adaptor domain XPE_20160 SM00387 Histidine kinase-like ATPases XPE_20160 SM01231 XPE_20160 XPE_20170 SM00487 DEAD-like helicases superfamily XPE_20170 SM00490 helicase superfamily c-terminal domain XPE_20170 SM00982 XPE_20170 XPE_20170 SM01058 CarD-like/TRCF domain XPE_20185 SM00448 cheY-homologous receiver domain XPE_20185 SM00862 Transcriptional regulatory protein, C terminal XPE_20190 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XPE_20190 SM00387 Histidine kinase-like ATPases XPE_20190 SM00388 His Kinase A (phosphoacceptor) domain XPE_20195 SM00645 Papain family cysteine protease XPE_20270 SM00342 helix_turn_helix, arabinose operon control protein XPE_20355 SM00342 helix_turn_helix, arabinose operon control protein XPE_20355 SM00478 endonuclease III XPE_20355 SM01009 AlkA N-terminal domain XPE_20400 SM00487 DEAD-like helicases superfamily XPE_20400 SM00490 helicase superfamily c-terminal domain XPE_20405 SM00052 Putative diguanylate phosphodiesterase XPE_20405 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XPE_20405 SM00091 PAS domain XPE_20405 SM00267 diguanylate cyclase XPE_20410 SM00363 S4 RNA-binding domain XPE_20415 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XPE_20415 SM00267 diguanylate cyclase XPE_20450 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XPE_20450 SM00387 Histidine kinase-like ATPases XPE_20450 SM00388 His Kinase A (phosphoacceptor) domain XPE_20455 SM00448 cheY-homologous receiver domain XPE_20455 SM00862 Transcriptional regulatory protein, C terminal XPE_20490 SM00382 ATPases associated with a variety of cellular activities XPE_20625 SM00316 Ribosomal protein S1-like RNA-binding domain XPE_20660 SM01351 XPE_20660 XPE_20675 SM00977 TilS substrate C-terminal domain XPE_20685 SM00098 Alkaline phosphatase homologues XPE_20740 SM01160 XPE_20740 XPE_20820 SM00729 Elongator protein 3, MiaB family, Radical SAM XPE_20855 SM00257 Lysin motif XPE_20885 SM00859 Semialdehyde dehydrogenase, NAD binding domain XPE_20950 SM00052 Putative diguanylate phosphodiesterase XPE_20950 SM00267 diguanylate cyclase XPE_20950 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XPE_20965 SM00822 XPE_20965 XPE_21010 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region XPE_21015 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region XPE_21065 SM00316 Ribosomal protein S1-like RNA-binding domain XPE_21065 SM00322 K homology RNA-binding domain XPE_21085 SM01387 XPE_21085 XPE_21090 SM00316 Ribosomal protein S1-like RNA-binding domain XPE_21090 SM00322 K homology RNA-binding domain XPE_21110 SM01001 AIR carboxylase XPE_21195 SM00487 DEAD-like helicases superfamily XPE_21195 SM00490 helicase superfamily c-terminal domain XPE_21260 SM00382 ATPases associated with a variety of cellular activities XPE_21320 SM00642 Alpha-amylase domain XPE_21350 SM00642 Alpha-amylase domain XPE_21355 SM00354 helix_turn _helix lactose operon repressor XPE_21360 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain XPE_21385 SM00873 B3/4 domain XPE_21385 SM00874 tRNA synthetase B5 domain XPE_21385 SM00896 Ferredoxin-fold anticodon binding domain XPE_21390 SM00411 bacterial (prokaryotic) histone like domain XPE_21395 SM00422 helix_turn_helix, mercury resistance XPE_21480 SM00849 Metallo-beta-lactamase superfamily XPE_21505 SM00861 Transketolase, pyrimidine binding domain XPE_21510 SM00507 HNH nucleases XPE_21540 SM00465 GIY-YIG type nucleases (URI domain) XPE_21555 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XPE_21555 SM00091 PAS domain XPE_21555 SM00387 Histidine kinase-like ATPases XPE_21555 SM00388 His Kinase A (phosphoacceptor) domain XPE_21555 SM00448 cheY-homologous receiver domain XPE_21570 SM00478 endonuclease III XPE_21580 SM00382 ATPases associated with a variety of cellular activities XPE_21580 SM00962 SRP54-type protein, GTPase domain XPE_21580 SM00963 SRP54-type protein, helical bundle domain XPE_21585 SM00342 helix_turn_helix, arabinose operon control protein XPE_21610 SM01130 XPE_21610 XPE_21655 SM00944 Pro-kumamolisin, activation domain XPE_21705 SM00387 Histidine kinase-like ATPases