locus-tag class description PJW04_00005 IPR003593 AAA+ ATPase domain PJW04_00005 IPR001957 Chromosomal replication control, initiator DnaA PJW04_00005 IPR020591 Chromosomal replication control, initiator DnaA-like PJW04_00005 IPR018312 Chromosomal replication control, initiator DnaA, conserved site PJW04_00005 IPR013317 Chromosomal replication initiator protein DnaA PJW04_00005 IPR013159 Chromosomal replication initiator, DnaA C-terminal PJW04_00005 IPR024633 DnaA N-terminal domain PJW04_00005 IPR038454 DnaA, N-terminal domain superfamily PJW04_00005 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_00005 IPR010921 Trp repressor/replication initiator PJW04_00010 IPR001001 DNA polymerase III, beta sliding clamp PJW04_00010 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal PJW04_00010 IPR022637 DNA polymerase III, beta sliding clamp, central PJW04_00010 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal PJW04_00015 IPR042174 DNA-binding RecF, domain 2 PJW04_00015 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_00015 IPR003395 RecF/RecN/SMC, N-terminal PJW04_00015 IPR001238 DNA-binding, RecF PJW04_00015 IPR018078 DNA-binding, RecF, conserved site PJW04_00020 IPR001241 DNA topoisomerase, type IIA PJW04_00020 IPR006171 TOPRIM domain PJW04_00020 IPR018522 DNA topoisomerase, type IIA, conserved site PJW04_00020 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 PJW04_00020 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal PJW04_00020 IPR013760 DNA topoisomerase, type IIA-like domain superfamily PJW04_00020 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PJW04_00020 IPR020568 Ribosomal protein S5 domain 2-type fold PJW04_00020 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_00020 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_00020 IPR041423 DNA gyrase subunit B insert domain PJW04_00020 IPR011557 DNA gyrase, subunit B PJW04_00020 IPR002288 DNA gyrase B subunit, C-terminal PJW04_00020 IPR034160 DNA gyrase subunit B, TOPRIM domain PJW04_00030 IPR001915 Peptidase M48 PJW04_00040 IPR006260 TonB/TolA, C-terminal PJW04_00040 IPR037682 TonB, C-terminal PJW04_00045 IPR002898 MotA/TolQ/ExbB proton channel PJW04_00050 IPR003400 Biopolymer transport protein ExbD/TolR PJW04_00055 IPR003400 Biopolymer transport protein ExbD/TolR PJW04_00060 IPR003400 Biopolymer transport protein ExbD/TolR PJW04_00065 IPR013785 Aldolase-type TIM barrel PJW04_00065 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ PJW04_00065 IPR036130 Pyridoxine 5'-phosphate synthase PJW04_00075 IPR030874 Cardiolipin synthase, Firmicutes-type PJW04_00075 IPR001736 Phospholipase D/Transphosphatidylase PJW04_00075 IPR022924 Cardiolipin synthase PJW04_00075 IPR027379 Cardiolipin synthase N-terminal PJW04_00075 IPR025202 Phospholipase D-like domain PJW04_00090 IPR040086 Protein MJ0683-like PJW04_00090 IPR006638 Elp3/MiaB/NifB PJW04_00090 IPR013785 Aldolase-type TIM barrel PJW04_00090 IPR007197 Radical SAM PJW04_00100 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) PJW04_00100 IPR042117 OMPP1/FadL/TodX superfamily PJW04_00120 IPR036034 PDZ superfamily PJW04_00120 IPR004447 C-terminal-processing peptidase S41A PJW04_00120 IPR005151 Tail specific protease PJW04_00120 IPR029045 ClpP/crotonase-like domain superfamily PJW04_00120 IPR001478 PDZ domain PJW04_00125 IPR011055 Duplicated hybrid motif PJW04_00125 IPR016047 Peptidase M23 PJW04_00135 IPR007484 Peptidase M28 PJW04_00145 IPR001547 Glycoside hydrolase, family 5 PJW04_00145 IPR018087 Glycoside hydrolase, family 5, conserved site PJW04_00145 IPR017853 Glycoside hydrolase superfamily PJW04_00150 IPR001547 Glycoside hydrolase, family 5 PJW04_00150 IPR018087 Glycoside hydrolase, family 5, conserved site PJW04_00150 IPR017853 Glycoside hydrolase superfamily PJW04_00155 IPR001547 Glycoside hydrolase, family 5 PJW04_00155 IPR018087 Glycoside hydrolase, family 5, conserved site PJW04_00155 IPR017853 Glycoside hydrolase superfamily PJW04_00160 IPR013154 Alcohol dehydrogenase, N-terminal PJW04_00160 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site PJW04_00160 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 PJW04_00160 IPR011032 GroES-like superfamily PJW04_00160 IPR020843 Polyketide synthase, enoylreductase domain PJW04_00160 IPR036291 NAD(P)-binding domain superfamily PJW04_00160 IPR013149 Alcohol dehydrogenase, C-terminal PJW04_00170 IPR009051 Alpha-helical ferredoxin PJW04_00170 IPR028261 Dihydroprymidine dehydrogenase domain II PJW04_00170 IPR023753 FAD/NAD(P)-binding domain PJW04_00170 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 PJW04_00170 IPR036188 FAD/NAD(P)-binding domain superfamily PJW04_00170 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PJW04_00175 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily PJW04_00175 IPR013785 Aldolase-type TIM barrel PJW04_00175 IPR017932 Glutamine amidotransferase type 2 domain PJW04_00175 IPR002489 Glutamate synthase, alpha subunit, C-terminal PJW04_00175 IPR029055 Nucleophile aminohydrolases, N-terminal PJW04_00175 IPR006982 Glutamate synthase, central-N PJW04_00175 IPR002932 Glutamate synthase domain PJW04_00195 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase PJW04_00195 IPR023343 Penicillin amidase type, domain 1 PJW04_00195 IPR029055 Nucleophile aminohydrolases, N-terminal PJW04_00195 IPR014395 Penicillin/GL-7-ACA/AHL acylase PJW04_00205 IPR036390 Winged helix DNA-binding domain superfamily PJW04_00205 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_00205 IPR000847 Transcription regulator HTH, LysR PJW04_00205 IPR005119 LysR, substrate-binding PJW04_00260 IPR018973 DEAD/DEAH-box helicase, putative PJW04_00260 IPR011545 DEAD/DEAH box helicase domain PJW04_00260 IPR014001 Helicase superfamily 1/2, ATP-binding domain PJW04_00260 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_00260 IPR001650 Helicase, C-terminal PJW04_00265 IPR004254 AdipoR/Haemolysin-III-related PJW04_00265 IPR005744 Hly-III PJW04_00285 IPR036291 NAD(P)-binding domain superfamily PJW04_00285 IPR020904 Short-chain dehydrogenase/reductase, conserved site PJW04_00285 IPR002347 Short-chain dehydrogenase/reductase SDR PJW04_00290 IPR036291 NAD(P)-binding domain superfamily PJW04_00290 IPR002347 Short-chain dehydrogenase/reductase SDR PJW04_00290 IPR020904 Short-chain dehydrogenase/reductase, conserved site PJW04_00295 IPR005119 LysR, substrate-binding PJW04_00295 IPR000847 Transcription regulator HTH, LysR PJW04_00295 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_00295 IPR036390 Winged helix DNA-binding domain superfamily PJW04_00305 IPR029039 Flavoprotein-like superfamily PJW04_00305 IPR003680 Flavodoxin-like fold PJW04_00340 IPR008462 CsbD-like domain PJW04_00340 IPR036629 YjbJ superfamily PJW04_00360 IPR023612 Peptidase M4 PJW04_00360 IPR027268 Peptidase M4/M1, CTD superfamily PJW04_00360 IPR001570 Peptidase M4, C-terminal PJW04_00360 IPR013856 Peptidase M4 domain PJW04_00360 IPR032475 Protealysin, N-terminal propeptide PJW04_00370 IPR036412 HAD-like superfamily PJW04_00370 IPR015797 NUDIX hydrolase-like domain superfamily PJW04_00370 IPR020476 NUDIX hydrolase PJW04_00370 IPR000086 NUDIX hydrolase domain PJW04_00370 IPR020084 NUDIX hydrolase, conserved site PJW04_00370 IPR006357 HAD-superfamily hydrolase, subfamily IIA PJW04_00370 IPR023214 HAD superfamily PJW04_00385 IPR013766 Thioredoxin domain PJW04_00385 IPR017937 Thioredoxin, conserved site PJW04_00385 IPR036249 Thioredoxin-like superfamily PJW04_00385 IPR005746 Thioredoxin PJW04_00390 IPR020846 Major facilitator superfamily domain PJW04_00390 IPR036259 MFS transporter superfamily PJW04_00390 IPR004736 MFS transporter, metabolite:H symporter PJW04_00390 IPR015041 Osmosensory transporter coiled coil PJW04_00390 IPR036292 Proline/betaine transporter ProP, C-terminal PJW04_00390 IPR005829 Sugar transporter, conserved site PJW04_00390 IPR005828 Major facilitator, sugar transporter-like PJW04_00430 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_00430 IPR011703 ATPase, AAA-3 PJW04_00430 IPR041628 ChlI/MoxR, AAA lid domain PJW04_00475 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal PJW04_00475 IPR028343 Fructose-1,6-bisphosphatase PJW04_00475 IPR000146 Fructose-1,6-bisphosphatase class 1 PJW04_00480 IPR000796 Aspartate/other aminotransferase PJW04_00480 IPR004839 Aminotransferase, class I/classII PJW04_00480 IPR015424 Pyridoxal phosphate-dependent transferase PJW04_00480 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PJW04_00480 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site PJW04_00480 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PJW04_00485 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PJW04_00485 IPR012910 TonB-dependent receptor, plug domain PJW04_00485 IPR037066 TonB-dependent receptor, plug domain superfamily PJW04_00485 IPR000531 TonB-dependent receptor-like, beta-barrel PJW04_00485 IPR010105 TonB-dependent siderophore receptor PJW04_00485 IPR039426 Vitamin B12 transporter BtuB-like PJW04_00500 IPR016161 Aldehyde/histidinol dehydrogenase PJW04_00500 IPR016163 Aldehyde dehydrogenase, C-terminal PJW04_00500 IPR016160 Aldehyde dehydrogenase, cysteine active site PJW04_00500 IPR029510 Aldehyde dehydrogenase, glutamic acid active site PJW04_00500 IPR015590 Aldehyde dehydrogenase domain PJW04_00500 IPR016162 Aldehyde dehydrogenase, N-terminal PJW04_00520 IPR016194 SPOC-like, C-terminal domain superfamily PJW04_00520 IPR009187 Non-homologous end joining protein Ku, prokaryotic type PJW04_00520 IPR006164 Ku70/Ku80 beta-barrel domain PJW04_00525 IPR037396 FMN hydroxy acid dehydrogenase domain PJW04_00525 IPR000262 FMN-dependent dehydrogenase PJW04_00525 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site PJW04_00525 IPR020920 L-lactate dehydrogenase, bacterial PJW04_00525 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent PJW04_00525 IPR013785 Aldolase-type TIM barrel PJW04_00540 IPR007269 Isoprenylcysteine carboxyl methyltransferase PJW04_00545 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain PJW04_00545 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_00550 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_00550 IPR000792 Transcription regulator LuxR, C-terminal PJW04_00550 IPR016032 Signal transduction response regulator, C-terminal effector PJW04_00550 IPR011006 CheY-like superfamily PJW04_00550 IPR001789 Signal transduction response regulator, receiver domain PJW04_00570 IPR001867 OmpR/PhoB-type DNA-binding domain PJW04_00570 IPR040970 CadC C-terminal domain 1 PJW04_00570 IPR011990 Tetratricopeptide-like helical domain superfamily PJW04_00570 IPR039420 Transcriptional regulatory protein WalR-like PJW04_00570 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_00570 IPR016032 Signal transduction response regulator, C-terminal effector PJW04_00575 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative PJW04_00575 IPR010758 Trans-2-enoyl-CoA reductase PJW04_00575 IPR024906 Enoyl reductase FAD binding domain PJW04_00585 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site PJW04_00585 IPR011611 Carbohydrate kinase PfkB PJW04_00585 IPR029056 Ribokinase-like PJW04_00660 IPR013780 Glycosyl hydrolase, all-beta PJW04_00660 IPR026585 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase PJW04_00660 IPR021828 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S PJW04_00660 IPR013783 Immunoglobulin-like fold PJW04_00660 IPR017853 Glycoside hydrolase superfamily PJW04_00660 IPR006047 Glycosyl hydrolase, family 13, catalytic domain PJW04_00665 IPR006047 Glycosyl hydrolase, family 13, catalytic domain PJW04_00665 IPR013780 Glycosyl hydrolase, all-beta PJW04_00665 IPR017853 Glycoside hydrolase superfamily PJW04_00665 IPR032091 Maltogenic Amylase, C-terminal PJW04_00665 IPR012810 Trehalose synthase/alpha-amylase, N-terminal PJW04_00670 IPR006047 Glycosyl hydrolase, family 13, catalytic domain PJW04_00670 IPR004193 Glycoside hydrolase, family 13, N-terminal PJW04_00670 IPR037439 1,4-alpha-glucan-branching enzyme PJW04_00670 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB PJW04_00670 IPR013783 Immunoglobulin-like fold PJW04_00670 IPR017853 Glycoside hydrolase superfamily PJW04_00670 IPR013780 Glycosyl hydrolase, all-beta PJW04_00670 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta PJW04_00670 IPR014756 Immunoglobulin E-set PJW04_00680 IPR023210 NADP-dependent oxidoreductase domain PJW04_00680 IPR036812 NADP-dependent oxidoreductase domain superfamily PJW04_00685 IPR029058 Alpha/Beta hydrolase fold PJW04_00685 IPR002018 Carboxylesterase, type B PJW04_00685 IPR019819 Carboxylesterase type B, conserved site PJW04_00685 IPR000997 Cholinesterase PJW04_00685 IPR019826 Carboxylesterase type B, active site PJW04_00690 IPR013830 SGNH hydrolase-type esterase domain PJW04_00690 IPR036514 SGNH hydrolase superfamily PJW04_00690 IPR013094 Alpha/beta hydrolase fold-3 PJW04_00690 IPR029058 Alpha/Beta hydrolase fold PJW04_00700 IPR004682 TRAP transporter solute receptor, DctP family PJW04_00700 IPR018389 TRAP transporter solute receptor DctP/TeaA PJW04_00700 IPR038404 TRAP transporter solute receptor DctP superfamily PJW04_00710 IPR004681 TRAP transporter large membrane protein DctM PJW04_00710 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit PJW04_00715 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily PJW04_00715 IPR041542 Beta-xylosidase, C-terminal Concanavalin A-like domain PJW04_00715 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily PJW04_00715 IPR006710 Glycoside hydrolase, family 43 PJW04_00720 IPR010982 Lambda repressor-like, DNA-binding domain superfamily PJW04_00720 IPR000843 LacI-type HTH domain PJW04_00720 IPR023588 Transcription regulator HTH, PurR PJW04_00720 IPR028082 Periplasmic binding protein-like I PJW04_00725 IPR021120 KduI/IolB isomerase PJW04_00725 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal PJW04_00725 IPR014710 RmlC-like jelly roll fold PJW04_00725 IPR011051 RmlC-like cupin domain superfamily PJW04_00725 IPR007045 5-keto 4-deoxyuronate isomerase PJW04_00730 IPR020904 Short-chain dehydrogenase/reductase, conserved site PJW04_00730 IPR002347 Short-chain dehydrogenase/reductase SDR PJW04_00730 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase PJW04_00730 IPR036291 NAD(P)-binding domain superfamily PJW04_00740 IPR001087 GDSL lipase/esterase PJW04_00740 IPR036514 SGNH hydrolase superfamily PJW04_00740 IPR037459 Rhamnogalacturonan acetylesterase RhgT-like PJW04_00750 IPR036329 Aromatic amino acid monoxygenase, C-terminal domain superfamily PJW04_00750 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site PJW04_00750 IPR005960 Phenylalanine-4-hydroxylase, monomeric form PJW04_00750 IPR019774 Aromatic amino acid hydroxylase, C-terminal PJW04_00750 IPR036951 Aromatic amino acid hydroxylase superfamily PJW04_00750 IPR001273 Aromatic amino acid hydroxylase PJW04_00755 IPR019885 Transcription regulator HTH, AsnC-type, conserved site PJW04_00755 IPR036390 Winged helix DNA-binding domain superfamily PJW04_00755 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PJW04_00755 IPR000485 AsnC-type HTH domain PJW04_00755 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_00755 IPR019888 Transcription regulator AsnC-type PJW04_00755 IPR011008 Dimeric alpha-beta barrel PJW04_00760 IPR012910 TonB-dependent receptor, plug domain PJW04_00760 IPR037066 TonB-dependent receptor, plug domain superfamily PJW04_00760 IPR011662 Secretin/TonB, short N-terminal domain PJW04_00760 IPR039423 TonB-dependent receptor-like PJW04_00760 IPR000531 TonB-dependent receptor-like, beta-barrel PJW04_00760 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PJW04_00760 IPR010917 TonB-dependent receptor, conserved site PJW04_00760 IPR010105 TonB-dependent siderophore receptor PJW04_00765 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase PJW04_00765 IPR001423 Lysophospholipase patatin, conserved site PJW04_00765 IPR002641 Patatin-like phospholipase domain PJW04_00770 IPR017439 Amidohydrolase PJW04_00770 IPR036264 Bacterial exopeptidase dimerisation domain PJW04_00770 IPR011650 Peptidase M20, dimerisation domain PJW04_00770 IPR002933 Peptidase M20 PJW04_00780 IPR003439 ABC transporter-like PJW04_00780 IPR017871 ABC transporter, conserved site PJW04_00780 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_00780 IPR003593 AAA+ ATPase domain PJW04_00795 IPR003593 AAA+ ATPase domain PJW04_00795 IPR003439 ABC transporter-like PJW04_00795 IPR017871 ABC transporter, conserved site PJW04_00795 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_00800 IPR000515 ABC transporter type 1, transmembrane domain MetI-like PJW04_00800 IPR035906 MetI-like superfamily PJW04_00810 IPR017806 Ergothioneine biosynthesis protein EgtB PJW04_00810 IPR016187 C-type lectin fold PJW04_00810 IPR024775 DinB-like domain PJW04_00810 IPR034660 DinB/YfiT-like putative metalloenzymes PJW04_00810 IPR005532 Sulfatase-modifying factor enzyme PJW04_00810 IPR042095 Sulfatase-modifying factor enzyme superfamily PJW04_00810 IPR032890 Hercynine oxygenase, Actinobacteria PJW04_00840 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 PJW04_00840 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_00840 IPR034904 Fe-S cluster assembly domain superfamily PJW04_00840 IPR019591 Mrp/NBP35 ATP-binding protein PJW04_00840 IPR002744 MIP18 family-like PJW04_00840 IPR000808 Mrp, conserved site PJW04_00845 IPR013078 Histidine phosphatase superfamily, clade-1 PJW04_00845 IPR029033 Histidine phosphatase superfamily PJW04_00855 IPR025202 Phospholipase D-like domain PJW04_00855 IPR001736 Phospholipase D/Transphosphatidylase PJW04_00860 IPR029069 HotDog domain superfamily PJW04_00860 IPR003736 Phenylacetic acid degradation-related domain PJW04_00860 IPR006683 Thioesterase domain PJW04_00890 IPR020843 Polyketide synthase, enoylreductase domain PJW04_00890 IPR013149 Alcohol dehydrogenase, C-terminal PJW04_00890 IPR013154 Alcohol dehydrogenase, N-terminal PJW04_00890 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site PJW04_00890 IPR011032 GroES-like superfamily PJW04_00890 IPR036291 NAD(P)-binding domain superfamily PJW04_00900 IPR003824 Undecaprenyl-diphosphatase UppP PJW04_00905 IPR036651 Glutamine synthetase, N-terminal domain superfamily PJW04_00905 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain PJW04_00905 IPR008146 Glutamine synthetase, catalytic domain PJW04_00905 IPR027303 Glutamine synthetase, glycine-rich site PJW04_00905 IPR004809 Glutamine synthetase type I PJW04_00905 IPR001637 Glutamine synthetase class-I, adenylation site PJW04_00905 IPR027302 Glutamine synthetase, N-terminal conserved site PJW04_00905 IPR008147 Glutamine synthetase, beta-Grasp domain PJW04_00910 IPR002332 Nitrogen regulatory protein P-II, urydylation site PJW04_00910 IPR017918 Nitrogen regulatory protein PII, conserved site PJW04_00910 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal PJW04_00910 IPR002187 Nitrogen regulatory protein PII PJW04_00910 IPR011322 Nitrogen regulatory PII-like, alpha/beta PJW04_00915 IPR029020 Ammonium/urea transporter PJW04_00915 IPR001905 Ammonium transporter PJW04_00915 IPR018047 Ammonium transporter, conserved site PJW04_00915 IPR024041 Ammonium transporter AmtB-like domain PJW04_00920 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_00920 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_00920 IPR035965 PAS domain superfamily PJW04_00920 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PJW04_00920 IPR000014 PAS domain PJW04_00920 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PJW04_00920 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW04_00920 IPR005467 Histidine kinase domain PJW04_00920 IPR013767 PAS fold PJW04_00925 IPR010114 DNA-binding transcriptional regulator NtrC PJW04_00925 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PJW04_00925 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PJW04_00925 IPR002078 RNA polymerase sigma factor 54 interaction domain PJW04_00925 IPR003593 AAA+ ATPase domain PJW04_00925 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_00925 IPR002197 DNA binding HTH domain, Fis-type PJW04_00925 IPR009057 Homeobox-like domain superfamily PJW04_00925 IPR011006 CheY-like superfamily PJW04_00925 IPR001789 Signal transduction response regulator, receiver domain PJW04_00925 IPR025944 Sigma-54 interaction domain, conserved site PJW04_00930 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily PJW04_00930 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone PJW04_00930 IPR018152 Superoxide dismutase, copper/zinc, binding site PJW04_00930 IPR001424 Superoxide dismutase, copper/zinc binding domain PJW04_00935 IPR001424 Superoxide dismutase, copper/zinc binding domain PJW04_00935 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone PJW04_00935 IPR018152 Superoxide dismutase, copper/zinc, binding site PJW04_00935 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily PJW04_00940 IPR006260 TonB/TolA, C-terminal PJW04_00940 IPR037682 TonB, C-terminal PJW04_00950 IPR020610 Thiolase, active site PJW04_00950 IPR020616 Thiolase, N-terminal PJW04_00950 IPR020613 Thiolase, conserved site PJW04_00950 IPR020617 Thiolase, C-terminal PJW04_00950 IPR016039 Thiolase-like PJW04_00950 IPR002155 Thiolase PJW04_00950 IPR012806 Acetyl-CoA C-acyltransferase FadI PJW04_00985 IPR036873 Rhodanese-like domain superfamily PJW04_00985 IPR001763 Rhodanese-like domain PJW04_00990 IPR035958 SecB-like superfamily PJW04_00990 IPR003708 Bacterial protein export chaperone SecB PJW04_00995 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily PJW04_00995 IPR013328 6-phosphogluconate dehydrogenase, domain 2 PJW04_00995 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal PJW04_00995 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent PJW04_00995 IPR036291 NAD(P)-binding domain superfamily PJW04_00995 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal PJW04_01010 IPR029061 Thiamin diphosphate-binding fold PJW04_01010 IPR012000 Thiamine pyrophosphate enzyme, central domain PJW04_01010 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain PJW04_01010 IPR000399 TPP-binding enzyme, conserved site PJW04_01010 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding PJW04_01010 IPR029035 DHS-like NAD/FAD-binding domain superfamily PJW04_01015 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW04_01015 IPR029151 Periplasmic sensor-like domain superfamily PJW04_01015 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PJW04_01015 IPR005467 Histidine kinase domain PJW04_01015 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_01015 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_01015 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PJW04_01020 IPR010114 DNA-binding transcriptional regulator NtrC PJW04_01020 IPR025944 Sigma-54 interaction domain, conserved site PJW04_01020 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PJW04_01020 IPR002078 RNA polymerase sigma factor 54 interaction domain PJW04_01020 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PJW04_01020 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_01020 IPR001789 Signal transduction response regulator, receiver domain PJW04_01020 IPR003593 AAA+ ATPase domain PJW04_01020 IPR009057 Homeobox-like domain superfamily PJW04_01020 IPR011006 CheY-like superfamily PJW04_01020 IPR002197 DNA binding HTH domain, Fis-type PJW04_01035 IPR011701 Major facilitator superfamily PJW04_01035 IPR020846 Major facilitator superfamily domain PJW04_01035 IPR036259 MFS transporter superfamily PJW04_01040 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PJW04_01040 IPR001537 tRNA/rRNA methyltransferase, SpoU type PJW04_01040 IPR029028 Alpha/beta knot methyltransferases PJW04_01040 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase PJW04_01055 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III PJW04_01055 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 PJW04_01055 IPR016039 Thiolase-like PJW04_01055 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal PJW04_01060 IPR003812 Fido domain PJW04_01060 IPR036597 Fido-like domain superfamily PJW04_01060 IPR040198 Fido domain-containing protein PJW04_01060 IPR026287 Protein adenylyltransferase SoFic-like PJW04_01060 IPR025758 Fic/DOC N-terminal PJW04_01065 IPR029058 Alpha/Beta hydrolase fold PJW04_01065 IPR000073 Alpha/beta hydrolase fold-1 PJW04_01065 IPR000639 Epoxide hydrolase-like PJW04_01070 IPR005358 Putative zinc- or iron-chelating domain containing protein PJW04_01075 IPR000873 AMP-dependent synthetase/ligase PJW04_01075 IPR020845 AMP-binding, conserved site PJW04_01075 IPR042099 AMP-dependent synthetase-like superfamily PJW04_01080 IPR002225 3-beta hydroxysteroid dehydrogenase/isomerase PJW04_01080 IPR036291 NAD(P)-binding domain superfamily PJW04_01100 IPR011009 Protein kinase-like domain superfamily PJW04_01100 IPR010232 Probable protein kinase UbiB PJW04_01100 IPR004147 UbiB domain PJW04_01110 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site PJW04_01110 IPR020103 Pseudouridine synthase, catalytic domain superfamily PJW04_01110 IPR006145 Pseudouridine synthase, RsuA/RluA PJW04_01120 IPR000352 Peptide chain release factor class I PJW04_01130 IPR029055 Nucleophile aminohydrolases, N-terminal PJW04_01130 IPR000246 Peptidase T2, asparaginase 2 PJW04_01135 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 PJW04_01135 IPR001567 Peptidase M3A/M3B catalytic domain PJW04_01140 IPR001279 Metallo-beta-lactamase PJW04_01140 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D PJW04_01140 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PJW04_01165 IPR006153 Cation/H+ exchanger PJW04_01165 IPR038770 Sodium/solute symporter superfamily PJW04_01170 IPR005119 LysR, substrate-binding PJW04_01170 IPR036390 Winged helix DNA-binding domain superfamily PJW04_01170 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_01170 IPR000847 Transcription regulator HTH, LysR PJW04_01175 IPR006252 Malate synthase A PJW04_01175 IPR019830 Malate synthase, conserved site PJW04_01175 IPR001465 Malate synthase PJW04_01175 IPR011076 Malate synthase-like superfamily PJW04_01180 IPR040442 Pyruvate kinase-like domain superfamily PJW04_01180 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily PJW04_01180 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site PJW04_01180 IPR006254 Isocitrate lyase PJW04_01180 IPR039556 ICL/PEPM domain PJW04_01185 IPR029787 Nucleotide cyclase PJW04_01185 IPR000160 GGDEF domain PJW04_01205 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain PJW04_01205 IPR029058 Alpha/Beta hydrolase fold PJW04_01205 IPR011042 Six-bladed beta-propeller, TolB-like PJW04_01210 IPR005481 Biotin carboxylase-like, N-terminal domain PJW04_01210 IPR011053 Single hybrid motif PJW04_01210 IPR011054 Rudiment single hybrid motif PJW04_01210 IPR016185 Pre-ATP-grasp domain superfamily PJW04_01210 IPR041265 Propionyl-coenzyme A carboxylase, BT domain PJW04_01210 IPR013815 ATP-grasp fold, subdomain 1 PJW04_01210 IPR000089 Biotin/lipoyl attachment PJW04_01210 IPR005482 Biotin carboxylase, C-terminal PJW04_01210 IPR011764 Biotin carboxylation domain PJW04_01210 IPR001882 Biotin-binding site PJW04_01210 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain PJW04_01210 IPR011761 ATP-grasp fold PJW04_01215 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal PJW04_01215 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal PJW04_01215 IPR029045 ClpP/crotonase-like domain superfamily PJW04_01215 IPR034733 Acetyl-CoA carboxylase PJW04_01220 IPR006089 Acyl-CoA dehydrogenase, conserved site PJW04_01220 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily PJW04_01220 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily PJW04_01220 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal PJW04_01220 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal PJW04_01220 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain PJW04_01220 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal PJW04_01280 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal PJW04_01280 IPR003495 CobW/HypB/UreG, nucleotide-binding domain PJW04_01280 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_01300 IPR005654 ATPase, AFG1-like PJW04_01300 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_01300 IPR030870 Cell division protein ZapE PJW04_01305 IPR000835 MarR-type HTH domain PJW04_01305 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_01305 IPR036390 Winged helix DNA-binding domain superfamily PJW04_01310 IPR036102 OsmC/Ohr superfamily PJW04_01310 IPR019953 Organic hydroperoxide resistance protein famiy PJW04_01310 IPR015946 K homology domain-like, alpha/beta PJW04_01310 IPR003718 OsmC/Ohr family PJW04_01330 IPR013149 Alcohol dehydrogenase, C-terminal PJW04_01330 IPR041694 Oxidoreductase, N-terminal domain PJW04_01330 IPR011032 GroES-like superfamily PJW04_01330 IPR036291 NAD(P)-binding domain superfamily PJW04_01330 IPR020843 Polyketide synthase, enoylreductase domain PJW04_01335 IPR023210 NADP-dependent oxidoreductase domain PJW04_01335 IPR036812 NADP-dependent oxidoreductase domain superfamily PJW04_01345 IPR006145 Pseudouridine synthase, RsuA/RluA PJW04_01345 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site PJW04_01345 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F PJW04_01345 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain PJW04_01345 IPR020103 Pseudouridine synthase, catalytic domain superfamily PJW04_01355 IPR011545 DEAD/DEAH box helicase domain PJW04_01355 IPR010225 ATP-dependent helicase HrpB PJW04_01355 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_01355 IPR001650 Helicase, C-terminal PJW04_01355 IPR014001 Helicase superfamily 1/2, ATP-binding domain PJW04_01355 IPR007502 Helicase-associated domain PJW04_01355 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal PJW04_01365 IPR009921 Domain of unknown function DUF1456 PJW04_01370 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily PJW04_01370 IPR023416 Transthyretin/hydroxyisourate hydrolase domain PJW04_01370 IPR000895 Transthyretin/hydroxyisourate hydrolase PJW04_01370 IPR023418 Transthyretin, thyroxine binding site PJW04_01370 IPR014306 Hydroxyisourate hydrolase PJW04_01370 IPR023419 Transthyretin, conserved site PJW04_01375 IPR038732 FAD-dependent urate hydroxylase HpyO, FAD/NAD(P)-binding domain PJW04_01375 IPR036188 FAD/NAD(P)-binding domain superfamily PJW04_01380 IPR019842 Uricase, conserved site PJW04_01380 IPR017580 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1 PJW04_01380 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily PJW04_01380 IPR002042 Uricase PJW04_01380 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase PJW04_01395 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase PJW04_01395 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PJW04_01395 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PJW04_01395 IPR015424 Pyridoxal phosphate-dependent transferase PJW04_01395 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site PJW04_01395 IPR000192 Aminotransferase class V domain PJW04_01400 IPR010158 Amidase, carbamoylase-type PJW04_01400 IPR036264 Bacterial exopeptidase dimerisation domain PJW04_01400 IPR002933 Peptidase M20 PJW04_01400 IPR011650 Peptidase M20, dimerisation domain PJW04_01405 IPR005119 LysR, substrate-binding PJW04_01405 IPR000847 Transcription regulator HTH, LysR PJW04_01405 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_01405 IPR036390 Winged helix DNA-binding domain superfamily PJW04_01410 IPR000639 Epoxide hydrolase-like PJW04_01410 IPR029058 Alpha/Beta hydrolase fold PJW04_01410 IPR000073 Alpha/beta hydrolase fold-1 PJW04_01410 IPR023594 Haloalkane dehalogenase, subfamily 2 PJW04_01425 IPR029055 Nucleophile aminohydrolases, N-terminal PJW04_01430 IPR036928 Amidase signature (AS) superfamily PJW04_01430 IPR000120 Amidase PJW04_01430 IPR014087 1-carboxybiuret hydrolase, AtzE subunit PJW04_01430 IPR023631 Amidase signature domain PJW04_01435 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain PJW04_01435 IPR023186 Inosine/uridine-preferring nucleoside hydrolase PJW04_01435 IPR022975 Pyrimidine-specific ribonucleoside hydrolase RihA PJW04_01435 IPR036452 Ribonucleoside hydrolase-like PJW04_01435 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site PJW04_01445 IPR006043 Xanthine/uracil/vitamin C permease PJW04_01445 IPR026033 Azaguanine-like transporters PJW04_01450 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site PJW04_01450 IPR012675 Beta-grasp domain superfamily PJW04_01450 IPR000951 Phthalate dioxygenase reductase PJW04_01450 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PJW04_01450 IPR017938 Riboflavin synthase-like beta-barrel PJW04_01450 IPR036010 2Fe-2S ferredoxin-like superfamily PJW04_01450 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain PJW04_01450 IPR017927 FAD-binding domain, ferredoxin reductase-type PJW04_01455 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily PJW04_01455 IPR017941 Rieske [2Fe-2S] iron-sulphur domain PJW04_01460 IPR005119 LysR, substrate-binding PJW04_01460 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_01460 IPR036390 Winged helix DNA-binding domain superfamily PJW04_01460 IPR000847 Transcription regulator HTH, LysR PJW04_01465 IPR018228 Deoxyribonuclease, TatD-related, conserved site PJW04_01465 IPR024918 3'-5' ssDNA/RNA exonuclease TatD PJW04_01465 IPR032466 Metal-dependent hydrolase PJW04_01465 IPR001130 TatD family PJW04_01480 IPR005119 LysR, substrate-binding PJW04_01480 IPR000847 Transcription regulator HTH, LysR PJW04_01480 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_01480 IPR036390 Winged helix DNA-binding domain superfamily PJW04_01485 IPR020846 Major facilitator superfamily domain PJW04_01485 IPR036259 MFS transporter superfamily PJW04_01485 IPR011701 Major facilitator superfamily PJW04_01495 IPR029058 Alpha/Beta hydrolase fold PJW04_01495 IPR000073 Alpha/beta hydrolase fold-1 PJW04_01495 IPR000639 Epoxide hydrolase-like PJW04_01495 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal PJW04_01500 IPR026590 Sirtuin family, catalytic core domain PJW04_01500 IPR029035 DHS-like NAD/FAD-binding domain superfamily PJW04_01500 IPR003000 Sirtuin family PJW04_01500 IPR026591 Sirtuin, catalytic core small domain superfamily PJW04_01500 IPR026587 Sirtuin, class II PJW04_01505 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal PJW04_01505 IPR023663 NADPH dehydrogenase PJW04_01505 IPR013785 Aldolase-type TIM barrel PJW04_01510 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain PJW04_01510 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site PJW04_01510 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily PJW04_01510 IPR013328 6-phosphogluconate dehydrogenase, domain 2 PJW04_01510 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding PJW04_01510 IPR015815 3-hydroxyisobutyrate dehydrogenase-related PJW04_01510 IPR036291 NAD(P)-binding domain superfamily PJW04_01520 IPR004810 Formyltetrahydrofolate deformylase PJW04_01520 IPR036477 Formyl transferase, N-terminal domain superfamily PJW04_01520 IPR002912 ACT domain PJW04_01520 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain PJW04_01520 IPR002376 Formyl transferase, N-terminal PJW04_01525 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_01525 IPR001867 OmpR/PhoB-type DNA-binding domain PJW04_01525 IPR016032 Signal transduction response regulator, C-terminal effector PJW04_01525 IPR001789 Signal transduction response regulator, receiver domain PJW04_01525 IPR039420 Transcriptional regulatory protein WalR-like PJW04_01525 IPR011006 CheY-like superfamily PJW04_01530 IPR003660 HAMP domain PJW04_01530 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_01530 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_01530 IPR005467 Histidine kinase domain PJW04_01530 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PJW04_01530 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PJW04_01530 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW04_01535 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PJW04_01535 IPR006143 RND efflux pump, membrane fusion protein PJW04_01540 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PJW04_01540 IPR001036 Acriflavin resistance protein PJW04_01540 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 PJW04_01545 IPR003423 Outer membrane efflux protein PJW04_01545 IPR010131 RND efflux system, outer membrane lipoprotein, NodT PJW04_01560 IPR003828 Epoxyqueuosine reductase QueH PJW04_01565 IPR036390 Winged helix DNA-binding domain superfamily PJW04_01565 IPR005119 LysR, substrate-binding PJW04_01565 IPR037406 HTH-type transcriptional regulator MetR, PBP2 domain PJW04_01565 IPR000847 Transcription regulator HTH, LysR PJW04_01565 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_01570 IPR029039 Flavoprotein-like superfamily PJW04_01570 IPR005025 NADPH-dependent FMN reductase-like PJW04_01570 IPR019912 FMN reductase, MsuE-like PJW04_01580 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal PJW04_01580 IPR006276 Cobalamin-independent methionine synthase PJW04_01580 IPR038071 UROD/MetE-like superfamily PJW04_01580 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal PJW04_01590 IPR004684 2-keto-3-deoxygluconate permease PJW04_01590 IPR018395 2-keto-3-deoxygluconate permease, subgroup PJW04_01600 IPR036291 NAD(P)-binding domain superfamily PJW04_01600 IPR008030 NmrA-like domain PJW04_01605 IPR036390 Winged helix DNA-binding domain superfamily PJW04_01605 IPR002577 Helix-turn-helix, HxlR type PJW04_01605 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_01675 IPR011010 DNA breaking-rejoining enzyme, catalytic core PJW04_01675 IPR013762 Integrase-like, catalytic domain superfamily PJW04_01675 IPR002104 Integrase, catalytic domain PJW04_01675 IPR011946 Integrase, integron-type PJW04_01675 IPR010998 Integrase/recombinase, N-terminal PJW04_01675 IPR004107 Integrase, SAM-like, N-terminal PJW04_01680 IPR004404 Dihydroxy-acid dehydratase PJW04_01680 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase PJW04_01680 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site PJW04_01680 IPR037237 IlvD/EDD, N-terminal domain PJW04_01680 IPR042096 Dihydroxy-acid dehydratase, C-terminal PJW04_01695 IPR001451 Hexapeptide repeat PJW04_01695 IPR011004 Trimeric LpxA-like superfamily PJW04_01705 IPR011701 Major facilitator superfamily PJW04_01705 IPR020846 Major facilitator superfamily domain PJW04_01705 IPR036259 MFS transporter superfamily PJW04_01705 IPR005829 Sugar transporter, conserved site PJW04_01710 IPR006675 HDIG domain PJW04_01710 IPR037522 HD-GYP domain PJW04_01710 IPR021812 Protein of unknown function DUF3391 PJW04_01710 IPR003607 HD/PDEase domain PJW04_01710 IPR006674 HD domain PJW04_01725 IPR036291 NAD(P)-binding domain superfamily PJW04_01725 IPR002347 Short-chain dehydrogenase/reductase SDR PJW04_01730 IPR016162 Aldehyde dehydrogenase, N-terminal PJW04_01730 IPR029510 Aldehyde dehydrogenase, glutamic acid active site PJW04_01730 IPR016160 Aldehyde dehydrogenase, cysteine active site PJW04_01730 IPR016163 Aldehyde dehydrogenase, C-terminal PJW04_01730 IPR016161 Aldehyde/histidinol dehydrogenase PJW04_01730 IPR015590 Aldehyde dehydrogenase domain PJW04_01740 IPR012733 4-hydroxybenzoate 3-monooxygenase PJW04_01740 IPR002938 FAD-binding domain PJW04_01740 IPR036188 FAD/NAD(P)-binding domain superfamily PJW04_01750 IPR018485 Carbohydrate kinase, FGGY, C-terminal PJW04_01750 IPR018483 Carbohydrate kinase, FGGY, conserved site PJW04_01750 IPR018484 Carbohydrate kinase, FGGY, N-terminal PJW04_01750 IPR005999 Glycerol kinase PJW04_01750 IPR000577 Carbohydrate kinase, FGGY PJW04_01755 IPR022357 Major intrinsic protein, conserved site PJW04_01755 IPR023271 Aquaporin-like PJW04_01755 IPR000425 Major intrinsic protein PJW04_01760 IPR031656 Alpha-glycerophosphate oxidase, C-terminal PJW04_01760 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily PJW04_01760 IPR006076 FAD dependent oxidoreductase PJW04_01760 IPR036188 FAD/NAD(P)-binding domain superfamily PJW04_01760 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase PJW04_01765 IPR001034 DeoR-type HTH domain PJW04_01765 IPR037171 NagB/RpiA transferase-like PJW04_01765 IPR018356 Transcription regulator, HTH DeoR-type, conserved site PJW04_01765 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_01765 IPR036390 Winged helix DNA-binding domain superfamily PJW04_01765 IPR014036 DeoR C-terminal sensor domain PJW04_01770 IPR017938 Riboflavin synthase-like beta-barrel PJW04_01770 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site PJW04_01770 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PJW04_01770 IPR036010 2Fe-2S ferredoxin-like superfamily PJW04_01770 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain PJW04_01770 IPR000951 Phthalate dioxygenase reductase PJW04_01770 IPR012675 Beta-grasp domain superfamily PJW04_01770 IPR017927 FAD-binding domain, ferredoxin reductase-type PJW04_01770 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain PJW04_01775 IPR017941 Rieske [2Fe-2S] iron-sulphur domain PJW04_01775 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily PJW04_01775 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site PJW04_01780 IPR037171 NagB/RpiA transferase-like PJW04_01780 IPR004165 Coenzyme A transferase family I PJW04_01785 IPR004165 Coenzyme A transferase family I PJW04_01785 IPR037171 NagB/RpiA transferase-like PJW04_01790 IPR020616 Thiolase, N-terminal PJW04_01790 IPR020613 Thiolase, conserved site PJW04_01790 IPR002155 Thiolase PJW04_01790 IPR020610 Thiolase, active site PJW04_01790 IPR020615 Thiolase, acyl-enzyme intermediate active site PJW04_01790 IPR016039 Thiolase-like PJW04_01790 IPR012793 Beta-ketoadipyl CoA thiolase PJW04_01790 IPR020617 Thiolase, C-terminal PJW04_01795 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal PJW04_01795 IPR015889 Intradiol ring-cleavage dioxygenase, core PJW04_01795 IPR024756 Protocatechuate 3,4-dioxygenase beta subunit, N-terminal PJW04_01795 IPR012785 Protocatechuate 3,4-dioxygenase, beta subunit PJW04_01800 IPR015889 Intradiol ring-cleavage dioxygenase, core PJW04_01800 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal PJW04_01800 IPR012786 Protocatechuate 3,4-dioxygenase, alpha subunit PJW04_01805 IPR019468 Adenylosuccinate lyase C-terminal PJW04_01805 IPR024083 Fumarase/histidase, N-terminal PJW04_01805 IPR020557 Fumarate lyase, conserved site PJW04_01805 IPR000362 Fumarate lyase family PJW04_01805 IPR022761 Fumarate lyase, N-terminal PJW04_01805 IPR008948 L-Aspartase-like PJW04_01805 IPR012789 3-carboxy-cis,cis-muconate cycloisomerase PJW04_01810 IPR000073 Alpha/beta hydrolase fold-1 PJW04_01810 IPR029058 Alpha/Beta hydrolase fold PJW04_01810 IPR022742 Serine aminopeptidase, S33 PJW04_01810 IPR026968 3-oxoadipate enol-lactonase 1/2 PJW04_01815 IPR012788 4-carboxymuconolactone decarboxylase PJW04_01815 IPR029032 AhpD-like PJW04_01815 IPR003779 Carboxymuconolactone decarboxylase-like PJW04_01830 IPR029016 GAF-like domain superfamily PJW04_01830 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR PJW04_01830 IPR014757 Transcription regulator IclR, C-terminal PJW04_01830 IPR005471 Transcription regulator IclR, N-terminal PJW04_01830 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_01830 IPR036390 Winged helix DNA-binding domain superfamily PJW04_01840 IPR013094 Alpha/beta hydrolase fold-3 PJW04_01840 IPR029058 Alpha/Beta hydrolase fold PJW04_01845 IPR019619 Protein of unknown function DUF2490 PJW04_01850 IPR036188 FAD/NAD(P)-binding domain superfamily PJW04_01850 IPR026904 GidA associated domain 3 PJW04_01850 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG PJW04_01850 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related PJW04_01850 IPR020595 MnmG-related, conserved site PJW04_01860 IPR001926 Pyridoxal-phosphate dependent enzyme PJW04_01860 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme PJW04_01880 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW04_01880 IPR041698 Methyltransferase domain 25 PJW04_01880 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC PJW04_01885 IPR011294 3-hydroxybutyrate dehydrogenase PJW04_01885 IPR036291 NAD(P)-binding domain superfamily PJW04_01885 IPR020904 Short-chain dehydrogenase/reductase, conserved site PJW04_01885 IPR002347 Short-chain dehydrogenase/reductase SDR PJW04_01890 IPR029058 Alpha/Beta hydrolase fold PJW04_01890 IPR000073 Alpha/beta hydrolase fold-1 PJW04_01890 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase PJW04_01900 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PJW04_01900 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PJW04_01900 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria PJW04_01900 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type PJW04_01900 IPR004839 Aminotransferase, class I/classII PJW04_01900 IPR015424 Pyridoxal phosphate-dependent transferase PJW04_01905 IPR013785 Aldolase-type TIM barrel PJW04_01905 IPR010722 Biotin and thiamin synthesis-associated domain PJW04_01905 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB PJW04_01905 IPR024177 Biotin synthase PJW04_01905 IPR006638 Elp3/MiaB/NifB PJW04_01905 IPR007197 Radical SAM PJW04_01910 IPR005222 Competence protein ComF PJW04_01910 IPR000836 Phosphoribosyltransferase domain PJW04_01910 IPR029057 Phosphoribosyltransferase-like PJW04_01915 IPR006370 4-hydroxybenzoate polyprenyltransferase-like PJW04_01915 IPR039653 Prenyltransferase PJW04_01915 IPR000537 UbiA prenyltransferase family PJW04_01915 IPR030470 UbiA prenyltransferase conserved site PJW04_01935 IPR008718 NolX PJW04_01975 IPR002191 Bacterial export protein family 3 PJW04_01975 IPR006305 Flagellar biosynthesis protein FliQ PJW04_01980 IPR005838 Type III secretion system inner membrane P protein PJW04_01980 IPR005773 Yop virulence translocation protein R PJW04_01995 IPR025505 FHIPEP conserved site PJW04_01995 IPR042196 FHIPEP, domain 4 PJW04_01995 IPR042193 FHIPEP, domain 3 PJW04_01995 IPR042194 FHIPEP, domain 1 PJW04_01995 IPR001712 Type III secretion system FHIPEP PJW04_02000 IPR006307 Type III exporter system, secretion apparatus protein BsaZ PJW04_02000 IPR006135 Type III secretion system substrate exporter PJW04_02000 IPR029025 Type III secretion system substrate exporter, C-terminal PJW04_02015 IPR006182 Secretory protein YscJ/FliF PJW04_02015 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ PJW04_02030 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain PJW04_02030 IPR040627 T3SS EscN ATPase, C-terminal PJW04_02030 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_02030 IPR013380 ATPase, type III secretion system, H+-transporting PJW04_02030 IPR005714 ATPase, type III secretion system, FliI/YscN PJW04_02030 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain PJW04_02030 IPR003593 AAA+ ATPase domain PJW04_02030 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site PJW04_02040 IPR002010 Type III secretion system inner membrane R protein PJW04_02040 IPR006304 Type III secretion protein SpaR/YscT PJW04_02045 IPR005644 NolW-like PJW04_02045 IPR038591 NolW-like superfamily PJW04_02045 IPR004846 Type II/III secretion system PJW04_02045 IPR004845 Type II secretion system GspD, conserved site PJW04_02045 IPR003522 Type III secretion system outer membrane pore YscC/HrcC PJW04_02070 IPR023346 Lysozyme-like domain superfamily PJW04_02070 IPR008258 Transglycosylase SLT domain 1 PJW04_02085 IPR011066 Mechanosensitive ion channel MscS, C-terminal PJW04_02085 IPR006685 Mechanosensitive ion channel MscS PJW04_02085 IPR010920 LSM domain superfamily PJW04_02085 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 PJW04_02085 IPR025692 Mechanosensitive ion channel inner membrane domain 1 PJW04_02085 IPR023408 Mechanosensitive ion channel MscS domain superfamily PJW04_02085 IPR006686 Mechanosensitive ion channel MscS, conserved site PJW04_02085 IPR024393 Mechanosensitive ion channel MscS, porin domain PJW04_02090 IPR020881 Phosphoglycerol transferase I PJW04_02090 IPR000917 Sulfatase, N-terminal PJW04_02090 IPR017850 Alkaline-phosphatase-like, core domain superfamily PJW04_02095 IPR011009 Protein kinase-like domain superfamily PJW04_02095 IPR000719 Protein kinase domain PJW04_02095 IPR004147 UbiB domain PJW04_02100 IPR008526 Inner membrane protein YedI PJW04_02105 IPR000160 GGDEF domain PJW04_02105 IPR029787 Nucleotide cyclase PJW04_02110 IPR001296 Glycosyl transferase, family 1 PJW04_02110 IPR011835 Bacterial/plant glycogen synthase PJW04_02110 IPR013534 Starch synthase, catalytic domain PJW04_02115 IPR014756 Immunoglobulin E-set PJW04_02115 IPR013783 Immunoglobulin-like fold PJW04_02115 IPR017853 Glycoside hydrolase superfamily PJW04_02115 IPR037439 1,4-alpha-glucan-branching enzyme PJW04_02115 IPR004193 Glycoside hydrolase, family 13, N-terminal PJW04_02115 IPR006047 Glycosyl hydrolase, family 13, catalytic domain PJW04_02115 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB PJW04_02115 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta PJW04_02115 IPR013780 Glycosyl hydrolase, all-beta PJW04_02120 IPR012768 Malto-oligosyltrehalose trehalohydrolase PJW04_02120 IPR014756 Immunoglobulin E-set PJW04_02120 IPR013780 Glycosyl hydrolase, all-beta PJW04_02120 IPR017853 Glycoside hydrolase superfamily PJW04_02120 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) PJW04_02120 IPR013783 Immunoglobulin-like fold PJW04_02120 IPR004193 Glycoside hydrolase, family 13, N-terminal PJW04_02120 IPR006047 Glycosyl hydrolase, family 13, catalytic domain PJW04_02125 IPR017853 Glycoside hydrolase superfamily PJW04_02125 IPR003385 Glycoside hydrolase, family 77 PJW04_02130 IPR006047 Glycosyl hydrolase, family 13, catalytic domain PJW04_02130 IPR017853 Glycoside hydrolase superfamily PJW04_02130 IPR012767 Maltooligosyl trehalose synthase PJW04_02140 IPR014756 Immunoglobulin E-set PJW04_02140 IPR013783 Immunoglobulin-like fold PJW04_02140 IPR013780 Glycosyl hydrolase, all-beta PJW04_02140 IPR004193 Glycoside hydrolase, family 13, N-terminal PJW04_02140 IPR006047 Glycosyl hydrolase, family 13, catalytic domain PJW04_02140 IPR017853 Glycoside hydrolase superfamily PJW04_02140 IPR011837 Glycogen debranching enzyme, GlgX type PJW04_02145 IPR016040 NAD(P)-binding domain PJW04_02145 IPR036291 NAD(P)-binding domain superfamily PJW04_02145 IPR000534 Semialdehyde dehydrogenase, NAD-binding PJW04_02150 IPR002347 Short-chain dehydrogenase/reductase SDR PJW04_02150 IPR036291 NAD(P)-binding domain superfamily PJW04_02150 IPR020904 Short-chain dehydrogenase/reductase, conserved site PJW04_02160 IPR010694 Uncharacterised protein family VirK PJW04_02165 IPR010131 RND efflux system, outer membrane lipoprotein, NodT PJW04_02165 IPR003423 Outer membrane efflux protein PJW04_02180 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PJW04_02180 IPR001036 Acriflavin resistance protein PJW04_02180 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 PJW04_02185 IPR036291 NAD(P)-binding domain superfamily PJW04_02185 IPR020904 Short-chain dehydrogenase/reductase, conserved site PJW04_02185 IPR002347 Short-chain dehydrogenase/reductase SDR PJW04_02195 IPR014014 RNA helicase, DEAD-box type, Q motif PJW04_02195 IPR001650 Helicase, C-terminal PJW04_02195 IPR014001 Helicase superfamily 1/2, ATP-binding domain PJW04_02195 IPR028622 ATP-dependent RNA helicase RhlE PJW04_02195 IPR011545 DEAD/DEAH box helicase domain PJW04_02195 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_02195 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site PJW04_02205 IPR000089 Biotin/lipoyl attachment PJW04_02205 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site PJW04_02205 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily PJW04_02205 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain PJW04_02205 IPR036625 E3-binding domain superfamily PJW04_02205 IPR004167 Peripheral subunit-binding domain PJW04_02205 IPR011053 Single hybrid motif PJW04_02215 IPR029061 Thiamin diphosphate-binding fold PJW04_02215 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II PJW04_02215 IPR005475 Transketolase-like, pyrimidine-binding domain PJW04_02215 IPR033248 Transketolase, C-terminal domain PJW04_02220 IPR001017 Dehydrogenase, E1 component PJW04_02220 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha PJW04_02220 IPR029061 Thiamin diphosphate-binding fold PJW04_02230 IPR037217 Tryptophan/Indoleamine 2,3-dioxygenase-like PJW04_02230 IPR004981 Tryptophan 2,3-dioxygenase PJW04_02235 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site PJW04_02235 IPR000109 Proton-dependent oligopeptide transporter family PJW04_02235 IPR036259 MFS transporter superfamily PJW04_02235 IPR020846 Major facilitator superfamily domain PJW04_02235 IPR005279 Dipeptide/tripeptide permease PJW04_02245 IPR000835 MarR-type HTH domain PJW04_02245 IPR023187 Transcriptional regulator MarR-type, conserved site PJW04_02245 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_02245 IPR036390 Winged helix DNA-binding domain superfamily PJW04_02250 IPR041736 4-hydroxyphenylpyruvate dioxygenase, N-terminal PJW04_02250 IPR005956 4-hydroxyphenylpyruvate dioxygenase PJW04_02250 IPR037523 Vicinal oxygen chelate (VOC) domain PJW04_02250 IPR041735 4-hydroxyphenylpyruvate dioxygenase, C-terminal PJW04_02250 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PJW04_02250 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PJW04_02255 IPR007569 Protein of unknown function DUF559 PJW04_02255 IPR011335 Restriction endonuclease type II-like PJW04_02260 IPR005708 Homogentisate 1,2-dioxygenase PJW04_02260 IPR022950 Homogentisate 1,2-dioxygenase, bacterial PJW04_02260 IPR014710 RmlC-like jelly roll fold PJW04_02260 IPR011051 RmlC-like cupin domain superfamily PJW04_02275 IPR005133 Na+/H+ antiporter subunit G PJW04_02280 IPR007208 Na(+)/H(+) antiporter subunit F-like PJW04_02290 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit PJW04_02290 IPR004775 Na(+)/H(+) antiporter subunit D1 PJW04_02295 IPR006673 Mnh complex subunit C1 PJW04_02295 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like PJW04_02300 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit PJW04_02300 IPR005281 Monovalent cation:proton antiporter, subunit B PJW04_02300 IPR025383 Domain of unknown function DUF4040 PJW04_02300 IPR007182 Na+/H+ antiporter MnhB subunit-related protein PJW04_02300 IPR005663 Monovalent cation proton antiporter subunit A PJW04_02300 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal PJW04_02315 IPR011096 FTP domain PJW04_02315 IPR013856 Peptidase M4 domain PJW04_02315 IPR023612 Peptidase M4 PJW04_02315 IPR002884 P domain PJW04_02315 IPR013783 Immunoglobulin-like fold PJW04_02315 IPR008979 Galactose-binding-like domain superfamily PJW04_02315 IPR027268 Peptidase M4/M1, CTD superfamily PJW04_02315 IPR015919 Cadherin-like superfamily PJW04_02315 IPR006644 Dystroglycan-type cadherin-like PJW04_02315 IPR001570 Peptidase M4, C-terminal PJW04_02320 IPR000726 Glycoside hydrolase, family 19, catalytic PJW04_02320 IPR023346 Lysozyme-like domain superfamily PJW04_02340 IPR028923 SAICAR synthetase/ADE2, N-terminal PJW04_02340 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase PJW04_02340 IPR018236 SAICAR synthetase, conserved site PJW04_02345 IPR001623 DnaJ domain PJW04_02345 IPR029024 TerB-like PJW04_02345 IPR023749 Co-chaperone DjlA PJW04_02345 IPR036869 Chaperone J-domain superfamily PJW04_02345 IPR007791 Co-chaperone DjlA, N-terminal PJW04_02350 IPR026019 Ribulose-phosphate 3-epimerase PJW04_02350 IPR013785 Aldolase-type TIM barrel PJW04_02350 IPR011060 Ribulose-phosphate binding barrel PJW04_02350 IPR000056 Ribulose-phosphate 3-epimerase-like PJW04_02355 IPR016181 Acyl-CoA N-acyltransferase PJW04_02355 IPR000182 GNAT domain PJW04_02360 IPR005218 Diacylglycerol/lipid kinase PJW04_02360 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal PJW04_02360 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily PJW04_02360 IPR022433 Lipid kinase YegS PJW04_02360 IPR001206 Diacylglycerol kinase, catalytic domain PJW04_02365 IPR015890 Chorismate-utilising enzyme, C-terminal PJW04_02365 IPR005801 ADC synthase PJW04_02365 IPR019999 Anthranilate synthase component I-like PJW04_02365 IPR006805 Anthranilate synthase component I, N-terminal PJW04_02365 IPR005256 Anthranilate synthase component I, PabB-like PJW04_02380 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain PJW04_02380 IPR029062 Class I glutamine amidotransferase-like PJW04_02380 IPR017926 Glutamine amidotransferase PJW04_02390 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily PJW04_02390 IPR017459 Glycosyl transferase family 3, N-terminal domain PJW04_02390 IPR000312 Glycosyl transferase, family 3 PJW04_02390 IPR005940 Anthranilate phosphoribosyl transferase PJW04_02390 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily PJW04_02395 IPR013785 Aldolase-type TIM barrel PJW04_02395 IPR013798 Indole-3-glycerol phosphate synthase PJW04_02395 IPR001468 Indole-3-glycerol phosphate synthase, conserved site PJW04_02395 IPR011060 Ribulose-phosphate binding barrel PJW04_02405 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_02405 IPR036390 Winged helix DNA-binding domain superfamily PJW04_02405 IPR018335 Transcription regulator HTH, Crp-type, conserved site PJW04_02405 IPR014710 RmlC-like jelly roll fold PJW04_02405 IPR012318 Crp-type HTH domain PJW04_02405 IPR000595 Cyclic nucleotide-binding domain PJW04_02405 IPR018490 Cyclic nucleotide-binding-like PJW04_02410 IPR016067 S-adenosylmethionine decarboxylase, core PJW04_02410 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic PJW04_02410 IPR009165 S-adenosylmethionine decarboxylase, bacterial PJW04_02415 IPR000390 Small multidrug resistance protein family PJW04_02420 IPR012347 Ferritin-like PJW04_02420 IPR009078 Ferritin-like superfamily PJW04_02420 IPR011566 Ubiquinone biosynthesis protein Coq7 PJW04_02425 IPR036899 Ribosomal protein L13 superfamily PJW04_02425 IPR005823 Ribosomal protein L13, bacterial-type PJW04_02425 IPR005822 Ribosomal protein L13 PJW04_02425 IPR023563 Ribosomal protein L13, conserved site PJW04_02430 IPR020568 Ribosomal protein S5 domain 2-type fold PJW04_02430 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PJW04_02430 IPR000754 Ribosomal protein S9 PJW04_02430 IPR023035 Ribosomal protein S9, bacterial/plastid PJW04_02430 IPR020574 Ribosomal protein S9, conserved site PJW04_02445 IPR022927 RNA pyrophosphohydrolase RppH PJW04_02445 IPR015797 NUDIX hydrolase-like domain superfamily PJW04_02445 IPR000086 NUDIX hydrolase domain PJW04_02445 IPR020084 NUDIX hydrolase, conserved site PJW04_02455 IPR002024 Bacterioferritin PJW04_02455 IPR008331 Ferritin/DPS protein domain PJW04_02455 IPR009040 Ferritin-like diiron domain PJW04_02455 IPR012347 Ferritin-like PJW04_02455 IPR009078 Ferritin-like superfamily PJW04_02460 IPR011006 CheY-like superfamily PJW04_02460 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_02460 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_02460 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PJW04_02460 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PJW04_02460 IPR019247 Histidine kinase BarA, N-terminal PJW04_02460 IPR036641 HPT domain superfamily PJW04_02460 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW04_02460 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain PJW04_02460 IPR001789 Signal transduction response regulator, receiver domain PJW04_02460 IPR005467 Histidine kinase domain PJW04_02460 IPR003660 HAMP domain PJW04_02465 IPR011006 CheY-like superfamily PJW04_02465 IPR001867 OmpR/PhoB-type DNA-binding domain PJW04_02465 IPR001789 Signal transduction response regulator, receiver domain PJW04_02465 IPR039420 Transcriptional regulatory protein WalR-like PJW04_02465 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_02485 IPR000361 FeS cluster biogenesis PJW04_02485 IPR016092 FeS cluster insertion protein PJW04_02485 IPR017870 FeS cluster insertion, C-terminal, conserved site PJW04_02485 IPR023063 FeS cluster insertion protein ErpA PJW04_02485 IPR035903 HesB-like domain superfamily PJW04_02495 IPR015376 Zinc ribbon, NADH pyrophosphatase PJW04_02495 IPR000086 NUDIX hydrolase domain PJW04_02495 IPR020084 NUDIX hydrolase, conserved site PJW04_02495 IPR015375 NADH pyrophosphatase-like, N-terminal PJW04_02495 IPR022925 NADH pyrophosphatase NudC PJW04_02495 IPR015797 NUDIX hydrolase-like domain superfamily PJW04_02500 IPR031347 Protein AmpE PJW04_02500 IPR004485 Cobalamin biosynthesis CobD/CbiB PJW04_02520 IPR036390 Winged helix DNA-binding domain superfamily PJW04_02520 IPR005119 LysR, substrate-binding PJW04_02520 IPR000847 Transcription regulator HTH, LysR PJW04_02520 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_02525 IPR036259 MFS transporter superfamily PJW04_02525 IPR020846 Major facilitator superfamily domain PJW04_02525 IPR011701 Major facilitator superfamily PJW04_02530 IPR010019 Integral membrane protein, YccS PJW04_02530 IPR010020 Integral membrane protein, YccS/YhfK PJW04_02530 IPR032692 Integral membrane protein YccS, N-terminal PJW04_02535 IPR013815 ATP-grasp fold, subdomain 1 PJW04_02535 IPR020560 Phosphoribosylglycinamide synthetase, C-domain PJW04_02535 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily PJW04_02535 IPR020559 Phosphoribosylglycinamide synthetase, conserved site PJW04_02535 IPR000115 Phosphoribosylglycinamide synthetase PJW04_02535 IPR011054 Rudiment single hybrid motif PJW04_02535 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal PJW04_02535 IPR011761 ATP-grasp fold PJW04_02535 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain PJW04_02535 IPR016185 Pre-ATP-grasp domain superfamily PJW04_02545 IPR002695 Bifunctional purine biosynthesis protein PurH-like PJW04_02545 IPR036914 Methylglyoxal synthase-like domain superfamily PJW04_02545 IPR011607 Methylglyoxal synthase-like domain PJW04_02545 IPR016193 Cytidine deaminase-like PJW04_02545 IPR024051 AICAR transformylase, duplicated domain superfamily PJW04_02550 IPR000462 CDP-alcohol phosphatidyltransferase PJW04_02555 IPR029058 Alpha/Beta hydrolase fold PJW04_02555 IPR022742 Serine aminopeptidase, S33 PJW04_02555 IPR022744 Methyltransferase domain, putative PJW04_02555 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW04_02560 IPR016130 Protein-tyrosine phosphatase, active site PJW04_02560 IPR000340 Dual specificity phosphatase, catalytic domain PJW04_02560 IPR029021 Protein-tyrosine phosphatase-like PJW04_02560 IPR003595 Protein-tyrosine phosphatase, catalytic PJW04_02560 IPR000387 Tyrosine specific protein phosphatases domain PJW04_02560 IPR020422 Dual specificity protein phosphatase domain PJW04_02585 IPR000374 Phosphatidate cytidylyltransferase PJW04_02590 IPR009057 Homeobox-like domain superfamily PJW04_02590 IPR002197 DNA binding HTH domain, Fis-type PJW04_02590 IPR005412 DNA-binding protein Fis PJW04_02600 IPR001387 Cro/C1-type helix-turn-helix domain PJW04_02600 IPR010982 Lambda repressor-like, DNA-binding domain superfamily PJW04_02610 IPR004498 Ribosomal protein L11 methyltransferase PJW04_02610 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW04_02630 IPR011054 Rudiment single hybrid motif PJW04_02630 IPR011764 Biotin carboxylation domain PJW04_02630 IPR016185 Pre-ATP-grasp domain superfamily PJW04_02630 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain PJW04_02630 IPR005482 Biotin carboxylase, C-terminal PJW04_02630 IPR005481 Biotin carboxylase-like, N-terminal domain PJW04_02630 IPR011761 ATP-grasp fold PJW04_02630 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase PJW04_02630 IPR013815 ATP-grasp fold, subdomain 1 PJW04_02640 IPR001249 Acetyl-CoA biotin carboxyl carrier PJW04_02640 IPR001882 Biotin-binding site PJW04_02640 IPR000089 Biotin/lipoyl attachment PJW04_02640 IPR011053 Single hybrid motif PJW04_02645 IPR001874 Dehydroquinase, class II PJW04_02645 IPR018509 Dehydroquinase, class II, conserved site PJW04_02645 IPR036441 Dehydroquinase, class II superfamily PJW04_02650 IPR013766 Thioredoxin domain PJW04_02650 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily PJW04_02650 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain PJW04_02650 IPR035671 DsbD gamma PJW04_02650 IPR022910 Thiol:disulphide interchange protein DsbD PJW04_02650 IPR036249 Thioredoxin-like superfamily PJW04_02650 IPR003834 Cytochrome C biogenesis protein, transmembrane domain PJW04_02655 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal PJW04_02655 IPR004323 Divalent ion tolerance protein, CutA PJW04_02655 IPR011322 Nitrogen regulatory PII-like, alpha/beta PJW04_02665 IPR007346 Endonuclease I PJW04_02675 IPR018369 Chaperonin GroES, conserved site PJW04_02675 IPR011032 GroES-like superfamily PJW04_02675 IPR020818 GroES chaperonin family PJW04_02675 IPR037124 GroES chaperonin superfamily PJW04_02680 IPR018370 Chaperonin Cpn60, conserved site PJW04_02680 IPR001844 Chaperonin Cpn60 PJW04_02680 IPR027409 GroEL-like apical domain superfamily PJW04_02680 IPR027413 GroEL-like equatorial domain superfamily PJW04_02680 IPR027410 TCP-1-like chaperonin intermediate domain superfamily PJW04_02680 IPR002423 Chaperonin Cpn60/TCP-1 family PJW04_02690 IPR010101 TonB-dependent vitamin B12 transporter BtuB PJW04_02690 IPR039426 Vitamin B12 transporter BtuB-like PJW04_02690 IPR012910 TonB-dependent receptor, plug domain PJW04_02690 IPR037066 TonB-dependent receptor, plug domain superfamily PJW04_02690 IPR000531 TonB-dependent receptor-like, beta-barrel PJW04_02690 IPR010917 TonB-dependent receptor, conserved site PJW04_02690 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PJW04_02690 IPR010916 TonB box, conserved site PJW04_02695 IPR013785 Aldolase-type TIM barrel PJW04_02695 IPR006218 DAHP synthetase I/KDSA PJW04_02695 IPR006219 DHAP synthase, class 1 PJW04_02710 IPR011042 Six-bladed beta-propeller, TolB-like PJW04_02710 IPR013658 SMP-30/Gluconolactonase/LRE-like region PJW04_02710 IPR005511 Senescence marker protein-30 (SMP-30) PJW04_02710 IPR006311 Twin-arginine translocation pathway, signal sequence PJW04_02720 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme PJW04_02720 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain PJW04_02720 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase PJW04_02725 IPR003744 Queuosine precursor transporter PJW04_02750 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE PJW04_02750 IPR029479 Nitroreductase PJW04_02750 IPR000415 Nitroreductase-like PJW04_02755 IPR023480 Uncharacterised protein family UPF0312/YceI PJW04_02755 IPR007372 Lipid/polyisoprenoid-binding, YceI-like PJW04_02755 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily PJW04_02780 IPR005777 Acetyl-S-ACP:malonate ACP transferase PJW04_02780 IPR037171 NagB/RpiA transferase-like PJW04_02785 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein PJW04_02785 IPR009662 Malonate decarboxylase delta subunit PJW04_02790 IPR034733 Acetyl-CoA carboxylase PJW04_02790 IPR029045 ClpP/crotonase-like domain superfamily PJW04_02790 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal PJW04_02790 IPR017556 Biotin-independent malonate decarboxylase, beta subunit PJW04_02800 IPR017557 Phosphoribosyl-dephospho-CoA transferase PJW04_02805 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG PJW04_02805 IPR002736 Triphosphoribosyl-dephospho-CoA protein PJW04_02810 IPR014043 Acyl transferase PJW04_02810 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase PJW04_02810 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding PJW04_02810 IPR001227 Acyl transferase domain superfamily PJW04_02820 IPR000485 AsnC-type HTH domain PJW04_02820 IPR011711 GntR, C-terminal PJW04_02820 IPR008920 Transcription regulator FadR/GntR, C-terminal PJW04_02820 IPR000524 Transcription regulator HTH, GntR PJW04_02820 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_02820 IPR036390 Winged helix DNA-binding domain superfamily PJW04_02825 IPR037512 Phosphoglycolate phosphatase, prokaryotic PJW04_02825 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic PJW04_02825 IPR006439 HAD hydrolase, subfamily IA PJW04_02825 IPR023214 HAD superfamily PJW04_02825 IPR041492 Haloacid dehalogenase-like hydrolase PJW04_02825 IPR023198 Phosphoglycolate phosphatase-like, domain 2 PJW04_02825 IPR036412 HAD-like superfamily PJW04_02860 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal PJW04_02860 IPR004660 Pyruvate dehydrogenase E1 component PJW04_02860 IPR041621 Pyruvate dehydrogenase E1 component, middle domain PJW04_02860 IPR029061 Thiamin diphosphate-binding fold PJW04_02860 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II PJW04_02860 IPR005474 Transketolase, N-terminal PJW04_03005 IPR036291 NAD(P)-binding domain superfamily PJW04_03005 IPR020904 Short-chain dehydrogenase/reductase, conserved site PJW04_03005 IPR002347 Short-chain dehydrogenase/reductase SDR PJW04_03015 IPR036249 Thioredoxin-like superfamily PJW04_03015 IPR016639 Glutathione S-transferase Omega/GSH PJW04_03015 IPR040079 Glutathione Transferase family PJW04_03015 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PJW04_03015 IPR010987 Glutathione S-transferase, C-terminal-like PJW04_03015 IPR004045 Glutathione S-transferase, N-terminal PJW04_03060 IPR011673 Protein of unknown function DUF1615 PJW04_03065 IPR000160 GGDEF domain PJW04_03065 IPR029787 Nucleotide cyclase PJW04_03070 IPR000944 Transcription regulator Rrf2-type PJW04_03070 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_03070 IPR036390 Winged helix DNA-binding domain superfamily PJW04_03075 IPR036188 FAD/NAD(P)-binding domain superfamily PJW04_03075 IPR023753 FAD/NAD(P)-binding domain PJW04_03075 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site PJW04_03075 IPR005982 Thioredoxin reductase PJW04_03095 IPR000620 EamA domain PJW04_03100 IPR037298 Cyclohexadienyl dehydratase pheC PJW04_03100 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PJW04_03100 IPR018313 Solute-binding protein family 3, conserved site PJW04_03110 IPR004841 Amino acid permease/ SLC12A domain PJW04_03110 IPR004840 Amino acid permease, conserved site PJW04_03120 IPR004488 Magnesium/cobalt transport protein CorA PJW04_03120 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB PJW04_03130 IPR023720 Trehalase, periplasmic PJW04_03130 IPR012341 Six-hairpin glycosidase-like superfamily PJW04_03130 IPR001661 Glycoside hydrolase, family 37 PJW04_03130 IPR018232 Glycoside hydrolase, family 37, conserved site PJW04_03130 IPR008928 Six-hairpin glycosidase superfamily PJW04_03140 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type PJW04_03140 IPR010979 Ribosomal protein S13-like, H2TH PJW04_03140 IPR035937 MutM-like, N-terminal PJW04_03140 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site PJW04_03140 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding PJW04_03140 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain PJW04_03160 IPR001633 EAL domain PJW04_03160 IPR000160 GGDEF domain PJW04_03160 IPR005330 MHYT domain PJW04_03160 IPR029787 Nucleotide cyclase PJW04_03160 IPR035919 EAL domain superfamily PJW04_03165 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding PJW04_03165 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PJW04_03165 IPR003660 HAMP domain PJW04_03165 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site PJW04_03165 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily PJW04_03165 IPR004090 Chemotaxis methyl-accepting receptor PJW04_03170 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily PJW04_03170 IPR017853 Glycoside hydrolase superfamily PJW04_03170 IPR018087 Glycoside hydrolase, family 5, conserved site PJW04_03170 IPR001547 Glycoside hydrolase, family 5 PJW04_03170 IPR012291 CBM2, carbohydrate-binding domain superfamily PJW04_03170 IPR001919 Carbohydrate-binding type-2 domain PJW04_03175 IPR036513 STAS domain superfamily PJW04_03175 IPR002645 STAS domain PJW04_03175 IPR001902 SLC26A/SulP transporter PJW04_03175 IPR011547 SLC26A/SulP transporter domain PJW04_03175 IPR018045 Sulphate anion transporter, conserved site PJW04_03180 IPR000160 GGDEF domain PJW04_03180 IPR029787 Nucleotide cyclase PJW04_03190 IPR029044 Nucleotide-diphospho-sugar transferases PJW04_03190 IPR001173 Glycosyltransferase 2-like PJW04_03190 IPR023725 Glucan biosynthesis glucosyltransferase H PJW04_03200 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region PJW04_03200 IPR003018 GAF domain PJW04_03200 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_03200 IPR010559 Signal transduction histidine kinase, internal region PJW04_03205 IPR011006 CheY-like superfamily PJW04_03205 IPR007492 LytTR DNA-binding domain PJW04_03205 IPR001789 Signal transduction response regulator, receiver domain PJW04_03210 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site PJW04_03210 IPR022417 Porphobilinogen deaminase, N-terminal PJW04_03210 IPR022418 Porphobilinogen deaminase, C-terminal PJW04_03210 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily PJW04_03210 IPR000860 Porphobilinogen deaminase PJW04_03245 IPR002470 Peptidase S9A, prolyl oligopeptidase PJW04_03245 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain PJW04_03245 IPR023302 Peptidase S9A, N-terminal domain PJW04_03245 IPR029058 Alpha/Beta hydrolase fold PJW04_03250 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site PJW04_03250 IPR015424 Pyridoxal phosphate-dependent transferase PJW04_03250 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PJW04_03250 IPR004839 Aminotransferase, class I/classII PJW04_03255 IPR002470 Peptidase S9A, prolyl oligopeptidase PJW04_03255 IPR029058 Alpha/Beta hydrolase fold PJW04_03255 IPR023302 Peptidase S9A, N-terminal domain PJW04_03255 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain PJW04_03260 IPR007401 Protein of unknown function DUF454 PJW04_03270 IPR001653 Diaminopimelate epimerase, DapF PJW04_03270 IPR018510 Diaminopimelate epimerase, active site PJW04_03280 IPR011010 DNA breaking-rejoining enzyme, catalytic core PJW04_03280 IPR011931 Tyrosine recombinase XerC PJW04_03280 IPR004107 Integrase, SAM-like, N-terminal PJW04_03280 IPR010998 Integrase/recombinase, N-terminal PJW04_03280 IPR002104 Integrase, catalytic domain PJW04_03280 IPR013762 Integrase-like, catalytic domain superfamily PJW04_03280 IPR023009 Tyrosine recombinase XerC/XerD PJW04_03285 IPR022281 ATP-dependent protease, HslV subunit PJW04_03285 IPR023333 Proteasome B-type subunit PJW04_03285 IPR001353 Proteasome, subunit alpha/beta PJW04_03285 IPR029055 Nucleophile aminohydrolases, N-terminal PJW04_03290 IPR004491 Heat shock protein HslU PJW04_03290 IPR019489 Clp ATPase, C-terminal PJW04_03290 IPR003959 ATPase, AAA-type, core PJW04_03290 IPR003593 AAA+ ATPase domain PJW04_03290 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_03300 IPR016181 Acyl-CoA N-acyltransferase PJW04_03300 IPR000182 GNAT domain PJW04_03305 IPR039562 Membrane fusion protein, biotin-lipoyl like domain PJW04_03315 IPR004033 UbiE/COQ5 methyltransferase PJW04_03315 IPR023576 UbiE/COQ5 methyltransferase, conserved site PJW04_03315 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW04_03320 IPR001633 EAL domain PJW04_03320 IPR035919 EAL domain superfamily PJW04_03320 IPR000160 GGDEF domain PJW04_03320 IPR005330 MHYT domain PJW04_03320 IPR029787 Nucleotide cyclase PJW04_03320 IPR035965 PAS domain superfamily PJW04_03325 IPR042097 Aminopeptidase N-like , N-terminal PJW04_03325 IPR014782 Peptidase M1, membrane alanine aminopeptidase PJW04_03325 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase PJW04_03325 IPR034016 Aminopeptidase N-type PJW04_03325 IPR024571 ERAP1-like C-terminal domain PJW04_03340 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily PJW04_03340 IPR002372 Pyrrolo-quinoline quinone repeat PJW04_03340 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PJW04_03340 IPR001479 Quinoprotein dehydrogenase, conserved site PJW04_03340 IPR017512 PQQ-dependent dehydrogenase, methanol/ethanol family PJW04_03360 IPR014183 Alcohol dehydrogenase class III PJW04_03360 IPR011032 GroES-like superfamily PJW04_03360 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site PJW04_03360 IPR013154 Alcohol dehydrogenase, N-terminal PJW04_03360 IPR013149 Alcohol dehydrogenase, C-terminal PJW04_03360 IPR020843 Polyketide synthase, enoylreductase domain PJW04_03360 IPR036291 NAD(P)-binding domain superfamily PJW04_03370 IPR003018 GAF domain PJW04_03370 IPR025944 Sigma-54 interaction domain, conserved site PJW04_03370 IPR029016 GAF-like domain superfamily PJW04_03370 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PJW04_03370 IPR002078 RNA polymerase sigma factor 54 interaction domain PJW04_03370 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_03370 IPR002197 DNA binding HTH domain, Fis-type PJW04_03370 IPR009057 Homeobox-like domain superfamily PJW04_03370 IPR003593 AAA+ ATPase domain PJW04_03370 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PJW04_03375 IPR011611 Carbohydrate kinase PfkB PJW04_03375 IPR029056 Ribokinase-like PJW04_03375 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site PJW04_03380 IPR004753 Cell shape determining protein MreB PJW04_03385 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 PJW04_03385 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 PJW04_03385 IPR007221 Rod shape-determining protein MreC PJW04_03395 IPR001460 Penicillin-binding protein, transpeptidase PJW04_03395 IPR012338 Beta-lactamase/transpeptidase-like PJW04_03395 IPR005311 Penicillin-binding protein, dimerisation domain PJW04_03395 IPR036138 Penicillin-binding protein, dimerisation domain superfamily PJW04_03395 IPR017790 Penicillin-binding protein 2 PJW04_03400 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site PJW04_03400 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA PJW04_03400 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB PJW04_03410 IPR000743 Glycoside hydrolase, family 28 PJW04_03410 IPR012334 Pectin lyase fold PJW04_03410 IPR011050 Pectin lyase fold/virulence factor PJW04_03415 IPR023346 Lysozyme-like domain superfamily PJW04_03415 IPR011757 Lytic transglycosylase MltB PJW04_03415 IPR031304 Transglycosylase SLT domain 2 PJW04_03420 IPR036908 RlpA-like domain superfamily PJW04_03420 IPR034718 Endolytic peptidoglycan transglycosylase RlpA PJW04_03420 IPR009009 RlpA-like protein, double-psi beta-barrel domain PJW04_03420 IPR012997 Rare lipoprotein A PJW04_03420 IPR007730 Sporulation-like domain PJW04_03420 IPR036680 Sporulation-like domain superfamily PJW04_03425 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A PJW04_03425 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal PJW04_03425 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily PJW04_03425 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal PJW04_03425 IPR012338 Beta-lactamase/transpeptidase-like PJW04_03425 IPR015956 Penicillin-binding protein, C-terminal domain superfamily PJW04_03435 IPR007454 Uncharacterised protein family UPF0250 PJW04_03435 IPR027471 YbeD-like domain superfamily PJW04_03440 IPR020605 Octanoyltransferase, conserved site PJW04_03440 IPR000544 Octanoyltransferase PJW04_03440 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain PJW04_03445 IPR003698 Lipoyl synthase PJW04_03445 IPR006638 Elp3/MiaB/NifB PJW04_03445 IPR013785 Aldolase-type TIM barrel PJW04_03445 IPR031691 Lipoyl synthase, N-terminal PJW04_03445 IPR007197 Radical SAM PJW04_03450 IPR029045 ClpP/crotonase-like domain superfamily PJW04_03450 IPR001478 PDZ domain PJW04_03450 IPR036034 PDZ superfamily PJW04_03450 IPR004447 C-terminal-processing peptidase S41A PJW04_03450 IPR005151 Tail specific protease PJW04_03450 IPR020992 Tail specific protease, C-terminal PJW04_03450 IPR040573 Tail specific protease, N-terminal domain PJW04_03460 IPR005119 LysR, substrate-binding PJW04_03460 IPR000847 Transcription regulator HTH, LysR PJW04_03460 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_03460 IPR036390 Winged helix DNA-binding domain superfamily PJW04_03470 IPR004821 Cytidyltransferase-like domain PJW04_03470 IPR041750 Bifunctional NMN adenylyltransferase/Nudix hydrolase, N-terminal NMNAT domain PJW04_03470 IPR015797 NUDIX hydrolase-like domain superfamily PJW04_03470 IPR020084 NUDIX hydrolase, conserved site PJW04_03470 IPR000086 NUDIX hydrolase domain PJW04_03470 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PJW04_03505 IPR013328 6-phosphogluconate dehydrogenase, domain 2 PJW04_03505 IPR006183 6-phosphogluconate dehydrogenase PJW04_03505 IPR036291 NAD(P)-binding domain superfamily PJW04_03505 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding PJW04_03505 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily PJW04_03505 IPR004849 6-phosphogluconate dehydrogenase, YqeC-type PJW04_03505 IPR006114 6-phosphogluconate dehydrogenase, C-terminal PJW04_03510 IPR004104 Oxidoreductase, C-terminal PJW04_03510 IPR036291 NAD(P)-binding domain superfamily PJW04_03510 IPR000683 Oxidoreductase, N-terminal PJW04_03515 IPR014004 Transport-associated and nodulation domain, bacteria PJW04_03515 IPR007055 BON domain PJW04_03520 IPR013654 PAS fold-2 PJW04_03520 IPR001294 Phytochrome PJW04_03520 IPR016132 Phytochrome chromophore attachment domain PJW04_03520 IPR035965 PAS domain superfamily PJW04_03520 IPR013515 Phytochrome, central region PJW04_03520 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PJW04_03520 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_03520 IPR005467 Histidine kinase domain PJW04_03520 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_03520 IPR029016 GAF-like domain superfamily PJW04_03520 IPR003018 GAF domain PJW04_03520 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PJW04_03525 IPR011006 CheY-like superfamily PJW04_03525 IPR001789 Signal transduction response regulator, receiver domain PJW04_03530 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW04_03530 IPR029151 Periplasmic sensor-like domain superfamily PJW04_03530 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PJW04_03530 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PJW04_03530 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_03530 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_03530 IPR005467 Histidine kinase domain PJW04_03535 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK PJW04_03535 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily PJW04_03540 IPR017711 Cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase PJW04_03540 IPR036291 NAD(P)-binding domain superfamily PJW04_03540 IPR020904 Short-chain dehydrogenase/reductase, conserved site PJW04_03540 IPR002347 Short-chain dehydrogenase/reductase SDR PJW04_03580 IPR038591 NolW-like superfamily PJW04_03580 IPR004845 Type II secretion system GspD, conserved site PJW04_03580 IPR004846 Type II/III secretion system PJW04_03580 IPR013356 Type II secretion system GspD PJW04_03580 IPR001775 GspD/PilQ family PJW04_03580 IPR005644 NolW-like PJW04_03585 IPR042181 Type II secretion system, protein E, N-terminal PJW04_03585 IPR013369 Type II secretion system GspE PJW04_03585 IPR037257 General secretory system II, protein E, N-terminal superfamily PJW04_03585 IPR001482 Type II/IV secretion system protein PJW04_03585 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_03590 IPR011850 General secretion pathway protein F PJW04_03590 IPR001992 Type II secretion system conserved site PJW04_03590 IPR018076 Type II secretion system F domain PJW04_03590 IPR042094 Type II secretion system F domain superfamily PJW04_03590 IPR003004 GspF/PilC family PJW04_03595 IPR012902 Prokaryotic N-terminal methylation site PJW04_03595 IPR000983 Bacterial general secretion pathway protein G-type pilin PJW04_03595 IPR013545 Type II secretion system protein G PJW04_03595 IPR010054 General secretion pathway protein G PJW04_03600 IPR012902 Prokaryotic N-terminal methylation site PJW04_03600 IPR022346 General secretion pathway, GspH PJW04_03600 IPR002416 Type II secretion system protein H PJW04_03605 IPR012902 Prokaryotic N-terminal methylation site PJW04_03605 IPR003413 Type II secretion system protein I domain PJW04_03605 IPR010052 Type II secretion system protein I PJW04_03610 IPR012902 Prokaryotic N-terminal methylation site PJW04_03610 IPR010055 Type II secretion system protein J PJW04_03615 IPR005628 General secretion pathway protein K PJW04_03615 IPR038072 GspK, central domain superfamily PJW04_03635 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily PJW04_03635 IPR000524 Transcription regulator HTH, GntR PJW04_03635 IPR011663 UbiC transcription regulator-associated PJW04_03635 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_03635 IPR036390 Winged helix DNA-binding domain superfamily PJW04_03640 IPR036259 MFS transporter superfamily PJW04_03640 IPR005964 Bacterial glucose/galactose transporter PJW04_03640 IPR011701 Major facilitator superfamily PJW04_03645 IPR028082 Periplasmic binding protein-like I PJW04_03645 IPR010982 Lambda repressor-like, DNA-binding domain superfamily PJW04_03645 IPR000843 LacI-type HTH domain PJW04_03650 IPR001347 Sugar isomerase (SIS) PJW04_03650 IPR017932 Glutamine amidotransferase type 2 domain PJW04_03650 IPR035466 GlmS/AgaS, SIS domain 1 PJW04_03650 IPR035490 GlmS/FrlB, SIS domain 2 PJW04_03650 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising PJW04_03650 IPR029055 Nucleophile aminohydrolases, N-terminal PJW04_03655 IPR011059 Metal-dependent hydrolase, composite domain superfamily PJW04_03655 IPR003764 N-acetylglucosamine-6-phosphate deacetylase PJW04_03655 IPR006680 Amidohydrolase-related PJW04_03655 IPR032466 Metal-dependent hydrolase PJW04_03670 IPR012006 tRNA nucleotidyltransferase, proteobacteria PJW04_03670 IPR003607 HD/PDEase domain PJW04_03670 IPR006674 HD domain PJW04_03670 IPR002646 Poly A polymerase, head domain PJW04_03670 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain PJW04_03675 IPR027424 Glucose Oxidase, domain 2 PJW04_03675 IPR012132 Glucose-methanol-choline oxidoreductase PJW04_03675 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal PJW04_03675 IPR036188 FAD/NAD(P)-binding domain superfamily PJW04_03675 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal PJW04_03675 IPR011533 Oxygen-dependent choline dehydrogenase PJW04_03680 IPR016160 Aldehyde dehydrogenase, cysteine active site PJW04_03680 IPR016162 Aldehyde dehydrogenase, N-terminal PJW04_03680 IPR029510 Aldehyde dehydrogenase, glutamic acid active site PJW04_03680 IPR011264 Betaine aldehyde dehydrogenase PJW04_03680 IPR015590 Aldehyde dehydrogenase domain PJW04_03680 IPR016163 Aldehyde dehydrogenase, C-terminal PJW04_03680 IPR016161 Aldehyde/histidinol dehydrogenase PJW04_03685 IPR018093 BCCT transporter, conserved site PJW04_03685 IPR000060 BCCT transporter family PJW04_03700 IPR013766 Thioredoxin domain PJW04_03700 IPR036249 Thioredoxin-like superfamily PJW04_03700 IPR017937 Thioredoxin, conserved site PJW04_03700 IPR001853 DSBA-like thioredoxin domain PJW04_03700 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL PJW04_03710 IPR036909 Cytochrome c-like domain superfamily PJW04_03710 IPR024167 Cytochrome c4-like PJW04_03710 IPR009056 Cytochrome c-like domain PJW04_03715 IPR030393 EngB-type guanine nucleotide-binding (G) domain PJW04_03715 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC PJW04_03715 IPR006073 GTP binding domain PJW04_03715 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_03720 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain PJW04_03720 IPR006336 Glutamate--cysteine ligase, GCS2 PJW04_03720 IPR035434 Glutamate--cysteine ligase, bacteria and plant PJW04_03720 IPR017809 Glutamate--cysteine ligase EgtA, Actinobacteria PJW04_03725 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_03725 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_03725 IPR005467 Histidine kinase domain PJW04_03725 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PJW04_03725 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PJW04_03725 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW04_03725 IPR003660 HAMP domain PJW04_03730 IPR011006 CheY-like superfamily PJW04_03730 IPR001867 OmpR/PhoB-type DNA-binding domain PJW04_03730 IPR016032 Signal transduction response regulator, C-terminal effector PJW04_03730 IPR001789 Signal transduction response regulator, receiver domain PJW04_03730 IPR039420 Transcriptional regulatory protein WalR-like PJW04_03730 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_03745 IPR003735 Metal-sensitive transcriptional repressor PJW04_03745 IPR038390 Metal-sensitive transcriptional repressor superfamily PJW04_03750 IPR013154 Alcohol dehydrogenase, N-terminal PJW04_03750 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site PJW04_03750 IPR011032 GroES-like superfamily PJW04_03750 IPR036291 NAD(P)-binding domain superfamily PJW04_03750 IPR020843 Polyketide synthase, enoylreductase domain PJW04_03750 IPR013149 Alcohol dehydrogenase, C-terminal PJW04_03750 IPR014183 Alcohol dehydrogenase class III PJW04_03755 IPR011057 Mss4-like superfamily PJW04_03755 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V PJW04_03755 IPR014185 Glutathione-dependent formaldehyde-activating enzyme PJW04_03760 IPR029058 Alpha/Beta hydrolase fold PJW04_03760 IPR014186 S-formylglutathione hydrolase PJW04_03760 IPR000801 Putative esterase PJW04_03770 IPR003593 AAA+ ATPase domain PJW04_03770 IPR032781 ABC-transporter extension domain PJW04_03770 IPR003439 ABC transporter-like PJW04_03770 IPR017871 ABC transporter, conserved site PJW04_03770 IPR022374 Energy-dependent translational throttle protein EttA PJW04_03770 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_03780 IPR039429 Serine hydroxymethyltransferase-like domain PJW04_03780 IPR015424 Pyridoxal phosphate-dependent transferase PJW04_03780 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PJW04_03780 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PJW04_03780 IPR001085 Serine hydroxymethyltransferase PJW04_03780 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site PJW04_03785 IPR005144 ATP-cone domain PJW04_03785 IPR003796 Ribonucleotide reductase regulator NrdR-like PJW04_03795 IPR016193 Cytidine deaminase-like PJW04_03795 IPR016192 APOBEC/CMP deaminase, zinc-binding PJW04_03795 IPR004794 Riboflavin biosynthesis protein RibD PJW04_03795 IPR011549 Riboflavin-specific deaminase, C-terminal PJW04_03795 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal PJW04_03795 IPR002125 Cytidine and deoxycytidylate deaminase domain PJW04_03795 IPR024072 Dihydrofolate reductase-like domain superfamily PJW04_03805 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily PJW04_03805 IPR001783 Lumazine-binding protein PJW04_03805 IPR026017 Lumazine-binding domain PJW04_03805 IPR017938 Riboflavin synthase-like beta-barrel PJW04_03815 IPR034964 Lumazine synthase PJW04_03815 IPR002180 Lumazine/riboflavin synthase PJW04_03815 IPR036467 Lumazine/riboflavin synthase superfamily PJW04_03820 IPR035926 NusB-like superfamily PJW04_03820 IPR011605 NusB antitermination factor PJW04_03820 IPR006027 NusB/RsmB/TIM44 PJW04_03825 IPR010918 PurM-like, C-terminal domain PJW04_03825 IPR036676 PurM-like, C-terminal domain superfamily PJW04_03825 IPR016188 PurM-like, N-terminal domain PJW04_03825 IPR036921 PurM-like, N-terminal domain superfamily PJW04_03825 IPR006283 Thiamine-monophosphate kinase PJW04_03845 IPR023298 P-type ATPase, transmembrane domain superfamily PJW04_03845 IPR004623 Potassium-transporting ATPase A chain PJW04_03850 IPR001757 P-type ATPase PJW04_03850 IPR036412 HAD-like superfamily PJW04_03850 IPR006391 P-type ATPase, B chain, subfamily IA PJW04_03850 IPR023298 P-type ATPase, transmembrane domain superfamily PJW04_03850 IPR018303 P-type ATPase, phosphorylation site PJW04_03850 IPR023299 P-type ATPase, cytoplasmic domain N PJW04_03850 IPR008250 P-type ATPase, A domain superfamily PJW04_03855 IPR003820 Potassium-transporting ATPase C chain PJW04_03860 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal PJW04_03860 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW04_03860 IPR038318 KdpD, transmembrane domain superfamily PJW04_03860 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PJW04_03860 IPR025201 Sensor protein KdpD, transmembrane domain PJW04_03860 IPR005467 Histidine kinase domain PJW04_03860 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_03860 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_03860 IPR029016 GAF-like domain superfamily PJW04_03860 IPR003018 GAF domain PJW04_03860 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PJW04_03865 IPR011006 CheY-like superfamily PJW04_03865 IPR001867 OmpR/PhoB-type DNA-binding domain PJW04_03865 IPR001789 Signal transduction response regulator, receiver domain PJW04_03865 IPR039420 Transcriptional regulatory protein WalR-like PJW04_03865 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_03875 IPR006094 FAD linked oxidase, N-terminal PJW04_03875 IPR004490 Glycolate oxidase subunit GlcD PJW04_03875 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 PJW04_03875 IPR016164 FAD-linked oxidase-like, C-terminal PJW04_03875 IPR004113 FAD-linked oxidase, C-terminal PJW04_03875 IPR016166 FAD-binding domain, PCMH-type PJW04_03875 IPR036318 FAD-binding, type PCMH-like superfamily PJW04_03880 IPR007404 LexA-binding, inner membrane-associated putative hydrolase PJW04_03885 IPR003509 Uncharacterised protein family UPF0102 PJW04_03885 IPR011335 Restriction endonuclease type II-like PJW04_03885 IPR011856 tRNA endonuclease-like domain superfamily PJW04_03895 IPR018063 SAM-dependent methyltransferase RsmI, conserved site PJW04_03895 IPR000878 Tetrapyrrole methylase PJW04_03895 IPR035996 Tetrapyrrole methylase superfamily PJW04_03895 IPR014777 Tetrapyrrole methylase, subdomain 1 PJW04_03895 IPR014776 Tetrapyrrole methylase, subdomain 2 PJW04_03895 IPR008189 rRNA small subunit methyltransferase I PJW04_03920 IPR035644 MraZ, C-terminal PJW04_03920 IPR035642 MraZ, N-terminal PJW04_03920 IPR038619 MraZ superfamily PJW04_03920 IPR007159 SpoVT-AbrB domain PJW04_03920 IPR020603 MraZ domain PJW04_03920 IPR037914 SpoVT-AbrB domain superfamily PJW04_03920 IPR003444 Transcriptional regulator MraZ PJW04_03925 IPR002903 Ribosomal RNA small subunit methyltransferase H PJW04_03925 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily PJW04_03925 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW04_03930 IPR011922 Cell division protein FtsL PJW04_03935 IPR037532 Peptidoglycan D,D-transpeptidase FtsI PJW04_03935 IPR012338 Beta-lactamase/transpeptidase-like PJW04_03935 IPR005311 Penicillin-binding protein, dimerisation domain PJW04_03935 IPR036138 Penicillin-binding protein, dimerisation domain superfamily PJW04_03935 IPR001460 Penicillin-binding protein, transpeptidase PJW04_03940 IPR035911 MurE/MurF, N-terminal PJW04_03940 IPR000713 Mur ligase, N-terminal catalytic domain PJW04_03940 IPR013221 Mur ligase, central PJW04_03940 IPR036615 Mur ligase, C-terminal domain superfamily PJW04_03940 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase PJW04_03940 IPR036565 Mur-like, catalytic domain superfamily PJW04_03940 IPR004101 Mur ligase, C-terminal PJW04_03945 IPR036615 Mur ligase, C-terminal domain superfamily PJW04_03945 IPR000713 Mur ligase, N-terminal catalytic domain PJW04_03945 IPR035911 MurE/MurF, N-terminal PJW04_03945 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase PJW04_03945 IPR013221 Mur ligase, central PJW04_03945 IPR004101 Mur ligase, C-terminal PJW04_03945 IPR036565 Mur-like, catalytic domain superfamily PJW04_03950 IPR000715 Glycosyl transferase, family 4 PJW04_03950 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase PJW04_03950 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site PJW04_03955 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA PJW04_03955 IPR013437 Probable peptidoglycan glycosyltransferase FtsW PJW04_03960 IPR006009 N-acetylglucosaminyltransferase, MurG PJW04_03960 IPR007235 Glycosyl transferase, family 28, C-terminal PJW04_03960 IPR004276 Glycosyltransferase family 28, N-terminal domain PJW04_03965 IPR000713 Mur ligase, N-terminal catalytic domain PJW04_03965 IPR013221 Mur ligase, central PJW04_03965 IPR036615 Mur ligase, C-terminal domain superfamily PJW04_03965 IPR004101 Mur ligase, C-terminal PJW04_03965 IPR036565 Mur-like, catalytic domain superfamily PJW04_03965 IPR005758 UDP-N-acetylmuramate--L-alanine ligase PJW04_03970 IPR005905 D-alanine--D-alanine ligase PJW04_03970 IPR011095 D-alanine--D-alanine ligase, C-terminal PJW04_03970 IPR011127 D-alanine--D-alanine ligase, N-terminal domain PJW04_03970 IPR016185 Pre-ATP-grasp domain superfamily PJW04_03970 IPR013815 ATP-grasp fold, subdomain 1 PJW04_03970 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site PJW04_03970 IPR011761 ATP-grasp fold PJW04_03975 IPR005548 Cell division protein FtsQ/DivIB PJW04_03975 IPR026579 Cell division protein FtsQ PJW04_03975 IPR034746 POTRA domain PJW04_03975 IPR013685 POTRA domain, FtsQ-type PJW04_03980 IPR003494 SHS2 domain inserted in FtsA PJW04_03980 IPR020823 Cell division protein FtsA PJW04_03985 IPR036525 Tubulin/FtsZ, GTPase domain superfamily PJW04_03985 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain PJW04_03985 IPR008280 Tubulin/FtsZ, C-terminal PJW04_03985 IPR024757 Cell division protein FtsZ, C-terminal PJW04_03985 IPR020805 Cell division protein FtsZ, conserved site PJW04_03985 IPR000158 Cell division protein FtsZ PJW04_03985 IPR003008 Tubulin/FtsZ, GTPase domain PJW04_03990 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase PJW04_03990 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal PJW04_03990 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal PJW04_03990 IPR020568 Ribosomal protein S5 domain 2-type fold PJW04_04000 IPR011055 Duplicated hybrid motif PJW04_04000 IPR016047 Peptidase M23 PJW04_04000 IPR013731 Opacity-associated protein A, N-terminal PJW04_04000 IPR018392 LysM domain PJW04_04005 IPR014018 SecA motor DEAD PJW04_04005 IPR011130 SecA, preprotein cross-linking domain PJW04_04005 IPR011116 SecA Wing/Scaffold PJW04_04005 IPR036266 SecA, Wing/Scaffold superfamily PJW04_04005 IPR036670 SecA, preprotein cross-linking domain superfamily PJW04_04005 IPR000185 Protein translocase subunit SecA PJW04_04005 IPR004027 SEC-C motif PJW04_04005 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_04005 IPR011115 SecA DEAD-like, N-terminal PJW04_04005 IPR020937 SecA conserved site PJW04_04010 IPR000086 NUDIX hydrolase domain PJW04_04010 IPR020084 NUDIX hydrolase, conserved site PJW04_04010 IPR015797 NUDIX hydrolase-like domain superfamily PJW04_04010 IPR020476 NUDIX hydrolase PJW04_04020 IPR004621 Eukaryotic-type methylenetetrahydrofolate reductase PJW04_04020 IPR003171 Methylenetetrahydrofolate reductase PJW04_04020 IPR029041 FAD-linked oxidoreductase-like PJW04_04020 IPR004620 5,10-methylenetetrahydrofolate reductase PJW04_04030 IPR018201 Beta-ketoacyl synthase, active site PJW04_04030 IPR014031 Beta-ketoacyl synthase, C-terminal PJW04_04030 IPR014030 Beta-ketoacyl synthase, N-terminal PJW04_04030 IPR036291 NAD(P)-binding domain superfamily PJW04_04030 IPR013149 Alcohol dehydrogenase, C-terminal PJW04_04030 IPR032821 Ketoacyl-synthetase, C-terminal extension PJW04_04030 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain PJW04_04030 IPR020807 Polyketide synthase, dehydratase domain PJW04_04030 IPR042104 Polyketide synthase, dehydratase domain superfamily PJW04_04030 IPR020843 Polyketide synthase, enoylreductase domain PJW04_04030 IPR013968 Polyketide synthase, ketoreductase domain PJW04_04030 IPR020806 Polyketide synthase, phosphopantetheine-binding domain PJW04_04030 IPR009081 Phosphopantetheine binding ACP domain PJW04_04030 IPR016039 Thiolase-like PJW04_04030 IPR011032 GroES-like superfamily PJW04_04030 IPR013154 Alcohol dehydrogenase, N-terminal PJW04_04030 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding PJW04_04030 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase PJW04_04030 IPR014043 Acyl transferase PJW04_04030 IPR036736 ACP-like superfamily PJW04_04030 IPR001227 Acyl transferase domain superfamily PJW04_04035 IPR036852 Peptidase S8/S53 domain superfamily PJW04_04035 IPR023828 Peptidase S8, subtilisin, Ser-active site PJW04_04035 IPR015366 Peptidase S53, activation domain PJW04_04035 IPR030400 Sedolisin domain PJW04_04035 IPR000209 Peptidase S8/S53 domain PJW04_04045 IPR036291 NAD(P)-binding domain superfamily PJW04_04045 IPR000683 Oxidoreductase, N-terminal PJW04_04050 IPR006047 Glycosyl hydrolase, family 13, catalytic domain PJW04_04050 IPR006046 Alpha amylase PJW04_04050 IPR017853 Glycoside hydrolase superfamily PJW04_04075 IPR041698 Methyltransferase domain 25 PJW04_04075 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW04_04080 IPR042172 Adenosylhomocysteinase-like superfamily PJW04_04080 IPR000043 Adenosylhomocysteinase-like PJW04_04080 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain PJW04_04080 IPR036291 NAD(P)-binding domain superfamily PJW04_04080 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site PJW04_04090 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily PJW04_04090 IPR033129 Phosphoenolpyruvate carboxylase, His active site PJW04_04090 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site PJW04_04090 IPR021135 Phosphoenolpyruvate carboxylase PJW04_04090 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type PJW04_04110 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel PJW04_04110 IPR006664 Outer membrane protein, bacterial PJW04_04110 IPR002368 Outer membrane protein, OmpA PJW04_04110 IPR006665 OmpA-like domain PJW04_04110 IPR006690 Outer membrane protein, OmpA-like, conserved site PJW04_04110 IPR036737 OmpA-like domain superfamily PJW04_04110 IPR000498 Outer membrane protein OmpA-like, transmembrane domain PJW04_04125 IPR029033 Histidine phosphatase superfamily PJW04_04125 IPR000560 Histidine phosphatase superfamily, clade-2 PJW04_04125 IPR033379 Histidine acid phosphatase active site PJW04_04130 IPR022631 S-adenosylmethionine synthetase, conserved site PJW04_04130 IPR022630 S-adenosylmethionine synthetase, C-terminal PJW04_04130 IPR022629 S-adenosylmethionine synthetase, central domain PJW04_04130 IPR022628 S-adenosylmethionine synthetase, N-terminal PJW04_04130 IPR002133 S-adenosylmethionine synthetase PJW04_04130 IPR022636 S-adenosylmethionine synthetase superfamily PJW04_04140 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW04_04140 IPR023506 Trans-aconitate 2-methyltransferase PJW04_04140 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal PJW04_04140 IPR041698 Methyltransferase domain 25 PJW04_04145 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal PJW04_04145 IPR018517 tRNA-dihydrouridine synthase, conserved site PJW04_04145 IPR001269 tRNA-dihydrouridine synthase PJW04_04145 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 PJW04_04145 IPR035587 DUS-like, FMN-binding domain PJW04_04145 IPR032887 tRNA-dihydrouridine synthase B PJW04_04145 IPR013785 Aldolase-type TIM barrel PJW04_04155 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site PJW04_04155 IPR029056 Ribokinase-like PJW04_04155 IPR002139 Ribokinase/fructokinase PJW04_04155 IPR011611 Carbohydrate kinase PfkB PJW04_04155 IPR011877 Ribokinase PJW04_04160 IPR008276 Concentrative nucleoside transporter PJW04_04160 IPR002668 Concentrative nucleoside transporter N-terminal domain PJW04_04160 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain PJW04_04160 IPR011657 Concentrative nucleoside transporter C-terminal domain PJW04_04160 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial PJW04_04165 IPR023210 NADP-dependent oxidoreductase domain PJW04_04165 IPR036812 NADP-dependent oxidoreductase domain superfamily PJW04_04175 IPR039426 Vitamin B12 transporter BtuB-like PJW04_04175 IPR037066 TonB-dependent receptor, plug domain superfamily PJW04_04175 IPR000531 TonB-dependent receptor-like, beta-barrel PJW04_04175 IPR010916 TonB box, conserved site PJW04_04175 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PJW04_04175 IPR010917 TonB-dependent receptor, conserved site PJW04_04175 IPR012910 TonB-dependent receptor, plug domain PJW04_04195 IPR035906 MetI-like superfamily PJW04_04195 IPR000515 ABC transporter type 1, transmembrane domain MetI-like PJW04_04200 IPR003593 AAA+ ATPase domain PJW04_04200 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_04200 IPR015859 ABC transporter, taurine import, TauD PJW04_04200 IPR017871 ABC transporter, conserved site PJW04_04200 IPR003439 ABC transporter-like PJW04_04210 IPR003819 TauD/TfdA-like domain PJW04_04210 IPR042098 Taurine dioxygenase TauD-like superfamily PJW04_04220 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_04220 IPR017871 ABC transporter, conserved site PJW04_04220 IPR003439 ABC transporter-like PJW04_04220 IPR003593 AAA+ ATPase domain PJW04_04225 IPR036514 SGNH hydrolase superfamily PJW04_04225 IPR013830 SGNH hydrolase-type esterase domain PJW04_04230 IPR011006 CheY-like superfamily PJW04_04230 IPR001867 OmpR/PhoB-type DNA-binding domain PJW04_04230 IPR016032 Signal transduction response regulator, C-terminal effector PJW04_04230 IPR001789 Signal transduction response regulator, receiver domain PJW04_04230 IPR039420 Transcriptional regulatory protein WalR-like PJW04_04230 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_04235 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW04_04235 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_04235 IPR013727 Two-component sensor kinase, N-terminal PJW04_04235 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_04235 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PJW04_04235 IPR005467 Histidine kinase domain PJW04_04235 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PJW04_04245 IPR000829 DAGK family PJW04_04245 IPR033718 Diacylglycerol kinase, prokaryotic PJW04_04245 IPR036945 Diacylglycerol kinase (DAGK) superfamily PJW04_04265 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt PJW04_04270 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily PJW04_04270 IPR000398 Thymidylate synthase PJW04_04270 IPR020940 Thymidylate synthase, active site PJW04_04270 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain PJW04_04280 IPR001796 Dihydrofolate reductase domain PJW04_04280 IPR017925 Dihydrofolate reductase conserved site PJW04_04280 IPR024072 Dihydrofolate reductase-like domain superfamily PJW04_04280 IPR012259 Dihydrofolate reductase PJW04_04285 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type PJW04_04285 IPR029052 Metallo-dependent phosphatase-like PJW04_04285 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase PJW04_04285 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) PJW04_04290 IPR007474 ApaG domain PJW04_04290 IPR036767 ApaG domain superfamily PJW04_04290 IPR023065 Uncharacterised protein family ApaG PJW04_04295 IPR011530 Ribosomal RNA adenine dimethylase PJW04_04295 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm PJW04_04295 IPR023165 rRNA adenine dimethylase-like PJW04_04295 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site PJW04_04295 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal PJW04_04295 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW04_04300 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase PJW04_04300 IPR005255 PdxA family PJW04_04305 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type PJW04_04305 IPR023034 Peptidyl-prolyl isomerase SurA PJW04_04305 IPR015391 SurA N-terminal PJW04_04305 IPR027304 Trigger factor/SurA domain superfamily PJW04_04310 IPR020889 LPS-assembly protein LptD PJW04_04310 IPR007543 LptD, C-terminal PJW04_04310 IPR005653 Organic solvent tolerance-like, N-terminal PJW04_04315 IPR000286 Histone deacetylase family PJW04_04315 IPR023801 Histone deacetylase domain PJW04_04315 IPR037138 Histone deacetylase domain superfamily PJW04_04315 IPR023696 Ureohydrolase domain superfamily PJW04_04320 IPR016030 Cobalamin adenosyltransferase-like PJW04_04320 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type PJW04_04320 IPR036451 Cobalamin adenosyltransferase-like superfamily PJW04_04330 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase PJW04_04330 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 PJW04_04330 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site PJW04_04330 IPR036188 FAD/NAD(P)-binding domain superfamily PJW04_04330 IPR002938 FAD-binding domain PJW04_04335 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 PJW04_04335 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site PJW04_04335 IPR036188 FAD/NAD(P)-binding domain superfamily PJW04_04335 IPR002938 FAD-binding domain PJW04_04355 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_04355 IPR000524 Transcription regulator HTH, GntR PJW04_04355 IPR008920 Transcription regulator FadR/GntR, C-terminal PJW04_04355 IPR011711 GntR, C-terminal PJW04_04355 IPR036390 Winged helix DNA-binding domain superfamily PJW04_04360 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B PJW04_04360 IPR034937 Protocatechuate 4,5-dioxygenase beta chain PJW04_04365 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B PJW04_04365 IPR011986 Extradiol ring-cleavage dioxygenase LigAB, LigA subunit PJW04_04365 IPR036622 Dioxygenase LigAB, LigA subunit superfamily PJW04_04365 IPR034940 Gallate dioxygenase, C-terminal PJW04_04370 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_04370 IPR012787 Pca transcription factor PcaQ PJW04_04370 IPR005119 LysR, substrate-binding PJW04_04370 IPR000847 Transcription regulator HTH, LysR PJW04_04370 IPR036390 Winged helix DNA-binding domain superfamily PJW04_04375 IPR010192 2-succinylbenzoate--CoA ligase PJW04_04375 IPR042099 AMP-dependent synthetase-like superfamily PJW04_04375 IPR000873 AMP-dependent synthetase/ligase PJW04_04375 IPR020845 AMP-binding, conserved site PJW04_04375 IPR025110 AMP-binding enzyme, C-terminal domain PJW04_04380 IPR016162 Aldehyde dehydrogenase, N-terminal PJW04_04380 IPR029510 Aldehyde dehydrogenase, glutamic acid active site PJW04_04380 IPR015590 Aldehyde dehydrogenase domain PJW04_04380 IPR016161 Aldehyde/histidinol dehydrogenase PJW04_04380 IPR016163 Aldehyde dehydrogenase, C-terminal PJW04_04385 IPR001753 Enoyl-CoA hydratase/isomerase PJW04_04385 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site PJW04_04385 IPR029045 ClpP/crotonase-like domain superfamily PJW04_04405 IPR006311 Twin-arginine translocation pathway, signal sequence PJW04_04405 IPR005511 Senescence marker protein-30 (SMP-30) PJW04_04405 IPR013658 SMP-30/Gluconolactonase/LRE-like region PJW04_04405 IPR011042 Six-bladed beta-propeller, TolB-like PJW04_04410 IPR004104 Oxidoreductase, C-terminal PJW04_04410 IPR000683 Oxidoreductase, N-terminal PJW04_04410 IPR036291 NAD(P)-binding domain superfamily PJW04_04415 IPR011224 Ribosomal RNA large subunit methyltransferase M PJW04_04415 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW04_04415 IPR040739 RlmM ferredoxin-like domain PJW04_04415 IPR002877 Ribosomal RNA methyltransferase FtsJ domain PJW04_04435 IPR000620 EamA domain PJW04_04445 IPR004514 Glutamine-tRNA synthetase PJW04_04445 IPR022861 Glutamine-tRNA ligase, bacterial PJW04_04445 IPR000924 Glutamyl/glutaminyl-tRNA synthetase PJW04_04445 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site PJW04_04445 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain PJW04_04445 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain PJW04_04445 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily PJW04_04445 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily PJW04_04445 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PJW04_04445 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal PJW04_04460 IPR011006 CheY-like superfamily PJW04_04460 IPR001867 OmpR/PhoB-type DNA-binding domain PJW04_04460 IPR016032 Signal transduction response regulator, C-terminal effector PJW04_04460 IPR001789 Signal transduction response regulator, receiver domain PJW04_04460 IPR039420 Transcriptional regulatory protein WalR-like PJW04_04460 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_04465 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain PJW04_04465 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW04_04465 IPR033414 Periplasmic sensor domain PJW04_04465 IPR005467 Histidine kinase domain PJW04_04465 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PJW04_04465 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PJW04_04465 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_04465 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_04465 IPR011006 CheY-like superfamily PJW04_04465 IPR036641 HPT domain superfamily PJW04_04465 IPR003660 HAMP domain PJW04_04465 IPR001789 Signal transduction response regulator, receiver domain PJW04_04470 IPR011006 CheY-like superfamily PJW04_04470 IPR016032 Signal transduction response regulator, C-terminal effector PJW04_04470 IPR001789 Signal transduction response regulator, receiver domain PJW04_04470 IPR000792 Transcription regulator LuxR, C-terminal PJW04_04480 IPR002569 Peptide methionine sulphoxide reductase MsrA PJW04_04480 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily PJW04_04490 IPR018225 Transaldolase, active site PJW04_04490 IPR013785 Aldolase-type TIM barrel PJW04_04490 IPR001585 Transaldolase/Fructose-6-phosphate aldolase PJW04_04490 IPR004730 Transaldolase type 1 PJW04_04495 IPR023459 Transcription elongation factor GreA/GreB family PJW04_04495 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal PJW04_04495 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain PJW04_04495 IPR028625 Regulator of nucleoside diphosphate kinase PJW04_04495 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily PJW04_04505 IPR036390 Winged helix DNA-binding domain superfamily PJW04_04505 IPR005119 LysR, substrate-binding PJW04_04505 IPR000847 Transcription regulator HTH, LysR PJW04_04505 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_04510 IPR023753 FAD/NAD(P)-binding domain PJW04_04510 IPR036188 FAD/NAD(P)-binding domain superfamily PJW04_04510 IPR036249 Thioredoxin-like superfamily PJW04_04510 IPR012336 Thioredoxin-like fold PJW04_04510 IPR012081 Alkyl hydroperoxide reductase subunit F PJW04_04510 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site PJW04_04510 IPR002109 Glutaredoxin PJW04_04515 IPR024706 Peroxiredoxin, AhpC-type PJW04_04515 IPR036249 Thioredoxin-like superfamily PJW04_04515 IPR013766 Thioredoxin domain PJW04_04515 IPR017559 Alkyl hydroperoxide reductase subunit C PJW04_04515 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant PJW04_04515 IPR019479 Peroxiredoxin, C-terminal PJW04_04520 IPR002052 DNA methylase, N-6 adenine-specific, conserved site PJW04_04520 IPR004556 Methyltransferase HemK-like PJW04_04520 IPR040758 Release factor glutamine methyltransferase, N-terminal domain PJW04_04520 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW04_04520 IPR007848 Methyltransferase small domain PJW04_04520 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific PJW04_04525 IPR029058 Alpha/Beta hydrolase fold PJW04_04525 IPR005944 Proline iminopeptidase PJW04_04525 IPR002410 Peptidase S33 PJW04_04525 IPR000073 Alpha/beta hydrolase fold-1 PJW04_04535 IPR004385 Nucleoside diphosphate pyrophosphatase PJW04_04535 IPR015797 NUDIX hydrolase-like domain superfamily PJW04_04535 IPR020084 NUDIX hydrolase, conserved site PJW04_04535 IPR000086 NUDIX hydrolase domain PJW04_04540 IPR002298 DNA polymerase A PJW04_04540 IPR008918 Helix-hairpin-helix motif, class 2 PJW04_04540 IPR029060 PIN-like domain superfamily PJW04_04540 IPR019760 DNA-directed DNA polymerase, family A, conserved site PJW04_04540 IPR036279 5'-3' exonuclease, C-terminal domain superfamily PJW04_04540 IPR001098 DNA-directed DNA polymerase, family A, palm domain PJW04_04540 IPR002562 3'-5' exonuclease domain PJW04_04540 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal PJW04_04540 IPR002421 5'-3' exonuclease, N-terminal PJW04_04540 IPR012337 Ribonuclease H-like superfamily PJW04_04540 IPR036397 Ribonuclease H superfamily PJW04_04540 IPR018320 DNA polymerase 1 PJW04_04540 IPR020045 DNA polymerase I-like, H3TH domain PJW04_04555 IPR026255 NAD(P) transhydrogenase, alpha subunit PJW04_04555 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal PJW04_04555 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal PJW04_04555 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 PJW04_04555 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 PJW04_04555 IPR036291 NAD(P)-binding domain superfamily PJW04_04555 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain PJW04_04575 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal PJW04_04580 IPR012136 NADP transhydrogenase, beta subunit PJW04_04580 IPR029035 DHS-like NAD/FAD-binding domain superfamily PJW04_04580 IPR034300 NADP transhydrogenase beta-like domain PJW04_04595 IPR001544 Aminotransferase class IV PJW04_04595 IPR018300 Aminotransferase, class IV, conserved site PJW04_04595 IPR036038 Aminotransferase-like, PLP-dependent enzymes PJW04_04595 IPR005786 Branched-chain amino acid aminotransferase II PJW04_04595 IPR033939 Branched-chain aminotransferase PJW04_04600 IPR015500 Peptidase S8, subtilisin-related PJW04_04600 IPR022398 Peptidase S8, subtilisin, His-active site PJW04_04600 IPR023827 Peptidase S8, subtilisin, Asp-active site PJW04_04600 IPR034176 Peptidase MprA-like catalytic domain PJW04_04600 IPR023828 Peptidase S8, subtilisin, Ser-active site PJW04_04600 IPR000209 Peptidase S8/S53 domain PJW04_04600 IPR036852 Peptidase S8/S53 domain superfamily PJW04_04600 IPR007280 Peptidase, C-terminal, archaeal/bacterial PJW04_04605 IPR007280 Peptidase, C-terminal, archaeal/bacterial PJW04_04605 IPR000209 Peptidase S8/S53 domain PJW04_04605 IPR036852 Peptidase S8/S53 domain superfamily PJW04_04605 IPR023827 Peptidase S8, subtilisin, Asp-active site PJW04_04605 IPR022398 Peptidase S8, subtilisin, His-active site PJW04_04605 IPR023828 Peptidase S8, subtilisin, Ser-active site PJW04_04605 IPR015500 Peptidase S8, subtilisin-related PJW04_04605 IPR034176 Peptidase MprA-like catalytic domain PJW04_04610 IPR036852 Peptidase S8/S53 domain superfamily PJW04_04610 IPR022398 Peptidase S8, subtilisin, His-active site PJW04_04610 IPR023828 Peptidase S8, subtilisin, Ser-active site PJW04_04610 IPR015500 Peptidase S8, subtilisin-related PJW04_04610 IPR034176 Peptidase MprA-like catalytic domain PJW04_04610 IPR000209 Peptidase S8/S53 domain PJW04_04610 IPR023827 Peptidase S8, subtilisin, Asp-active site PJW04_04610 IPR007280 Peptidase, C-terminal, archaeal/bacterial PJW04_04615 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain PJW04_04615 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily PJW04_04615 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC PJW04_04625 IPR033452 Glycosyl hydrolase family 30, beta sandwich domain PJW04_04625 IPR013780 Glycosyl hydrolase, all-beta PJW04_04625 IPR017853 Glycoside hydrolase superfamily PJW04_04625 IPR033453 Glycosyl hydrolase family 30, TIM-barrel domain PJW04_04625 IPR001139 Glycoside hydrolase family 30 PJW04_04635 IPR008254 Flavodoxin/nitric oxide synthase PJW04_04635 IPR010089 Flavoprotein WrbA-like PJW04_04635 IPR005025 NADPH-dependent FMN reductase-like PJW04_04635 IPR001226 Flavodoxin, conserved site PJW04_04635 IPR029039 Flavoprotein-like superfamily PJW04_04640 IPR023679 Uncharacterised protein family UPF0761, bacterial PJW04_04640 IPR017039 Virulence factor BrkB PJW04_04645 IPR013766 Thioredoxin domain PJW04_04645 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE PJW04_04645 IPR013740 Redoxin PJW04_04645 IPR036249 Thioredoxin-like superfamily PJW04_04645 IPR017937 Thioredoxin, conserved site PJW04_04650 IPR001792 Acylphosphatase-like domain PJW04_04650 IPR020456 Acylphosphatase PJW04_04650 IPR036046 Acylphosphatase-like domain superfamily PJW04_04660 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_04660 IPR016898 Polyphosphate kinase 2 PJW04_04660 IPR022488 Polyphosphate kinase-2-related PJW04_04660 IPR022486 Polyphosphate kinase 2, PA0141 PJW04_04665 IPR012245 Molybdenum cofactor biosynthesis protein MoaB PJW04_04665 IPR036425 MoaB/Mog-like domain superfamily PJW04_04665 IPR001453 MoaB/Mog domain PJW04_04665 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria PJW04_04665 IPR008284 Molybdenum cofactor biosynthesis, conserved site PJW04_04675 IPR005139 Peptide chain release factor PJW04_04675 IPR004373 Peptide chain release factor 1 PJW04_04675 IPR000352 Peptide chain release factor class I PJW04_04680 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase PJW04_04680 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain PJW04_04680 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal PJW04_04680 IPR018214 Glutamyl-tRNA reductase, conserved site PJW04_04680 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily PJW04_04680 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily PJW04_04680 IPR036291 NAD(P)-binding domain superfamily PJW04_04680 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase PJW04_04685 IPR011990 Tetratricopeptide-like helical domain superfamily PJW04_04685 IPR013026 Tetratricopeptide repeat-containing domain PJW04_04685 IPR019734 Tetratricopeptide repeat PJW04_04690 IPR029046 Lipoprotein localisation LolA/LolB/LppX PJW04_04690 IPR004565 Outer membrane lipoprotein LolB PJW04_04695 IPR013750 GHMP kinase, C-terminal domain PJW04_04695 IPR036554 GHMP kinase, C-terminal domain superfamily PJW04_04695 IPR006204 GHMP kinase N-terminal domain PJW04_04695 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase PJW04_04695 IPR020568 Ribosomal protein S5 domain 2-type fold PJW04_04695 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PJW04_04705 IPR005946 Ribose-phosphate pyrophosphokinase PJW04_04705 IPR000836 Phosphoribosyltransferase domain PJW04_04705 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type PJW04_04705 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site PJW04_04705 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain PJW04_04705 IPR029057 Phosphoribosyltransferase-like PJW04_04710 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal PJW04_04710 IPR029751 Ribosomal protein L25 PJW04_04710 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily PJW04_04710 IPR020057 Ribosomal protein L25, beta domain PJW04_04710 IPR037121 Ribosomal protein L25, C-terminal PJW04_04710 IPR001021 Ribosomal protein L25, long-form PJW04_04710 IPR020055 Ribosomal protein L25, short-form PJW04_04715 IPR036416 Peptidyl-tRNA hydrolase superfamily PJW04_04715 IPR001328 Peptidyl-tRNA hydrolase PJW04_04715 IPR018171 Peptidyl-tRNA hydrolase, conserved site PJW04_04720 IPR013029 YchF, C-terminal domain PJW04_04720 IPR004095 TGS PJW04_04720 IPR023192 TGS-like domain superfamily PJW04_04720 IPR041706 YchF, N-terminal PJW04_04720 IPR012676 TGS-like PJW04_04720 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 PJW04_04720 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_04720 IPR006073 GTP binding domain PJW04_04720 IPR031167 OBG-type guanine nucleotide-binding (G) domain PJW04_04720 IPR012675 Beta-grasp domain superfamily PJW04_04740 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal PJW04_04740 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle PJW04_04740 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal PJW04_04740 IPR009000 Translation protein, beta-barrel domain superfamily PJW04_04740 IPR005225 Small GTP-binding protein domain PJW04_04740 IPR000795 Transcription factor, GTP-binding domain PJW04_04740 IPR031157 Tr-type G domain, conserved site PJW04_04740 IPR033720 Elongation factor Tu, domain 2 PJW04_04740 IPR004161 Translation elongation factor EFTu-like, domain 2 PJW04_04740 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain PJW04_04740 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_04750 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit PJW04_04750 IPR038379 SecE superfamily PJW04_04750 IPR005807 SecE subunit of protein translocation complex, bacterial-like PJW04_04755 IPR036735 NusG, N-terminal domain superfamily PJW04_04755 IPR014722 Ribosomal protein L2, domain 2 PJW04_04755 IPR001062 Transcription antitermination protein, NusG PJW04_04755 IPR008991 Translation protein SH3-like domain superfamily PJW04_04755 IPR005824 KOW PJW04_04755 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site PJW04_04755 IPR006645 NusG, N-terminal PJW04_04760 IPR020784 Ribosomal protein L11, N-terminal PJW04_04760 IPR020785 Ribosomal protein L11, conserved site PJW04_04760 IPR036769 Ribosomal protein L11, C-terminal domain superfamily PJW04_04760 IPR020783 Ribosomal protein L11, C-terminal PJW04_04760 IPR006519 Ribosomal protein L11, bacterial-type PJW04_04760 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily PJW04_04760 IPR000911 Ribosomal protein L11/L12 PJW04_04765 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein PJW04_04765 IPR005878 Ribosomal protein L1, bacterial-type PJW04_04765 IPR002143 Ribosomal protein L1 PJW04_04765 IPR023674 Ribosomal protein L1-like PJW04_04765 IPR023673 Ribosomal protein L1, conserved site PJW04_04765 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich PJW04_04770 IPR001790 Ribosomal protein L10P PJW04_04770 IPR022973 Ribosomal protein L10 PJW04_04775 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily PJW04_04775 IPR008932 Ribosomal protein L7/L12, oligomerisation PJW04_04775 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like PJW04_04775 IPR000206 Ribosomal protein L7/L12 PJW04_04775 IPR013823 Ribosomal protein L7/L12, C-terminal PJW04_04780 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type PJW04_04780 IPR007121 RNA polymerase, beta subunit, conserved site PJW04_04780 IPR007644 RNA polymerase, beta subunit, protrusion PJW04_04780 IPR007642 RNA polymerase Rpb2, domain 2 PJW04_04780 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily PJW04_04780 IPR037034 RNA polymerase Rpb2, domain 2 superfamily PJW04_04780 IPR007641 RNA polymerase Rpb2, domain 7 PJW04_04780 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain PJW04_04780 IPR015712 DNA-directed RNA polymerase, subunit 2 PJW04_04780 IPR007645 RNA polymerase Rpb2, domain 3 PJW04_04780 IPR042107 DNA-directed RNA polymerase, beta subunit, external 1 domain superfamily PJW04_04780 IPR014724 RNA polymerase Rpb2, OB-fold PJW04_04780 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain PJW04_04785 IPR007066 RNA polymerase Rpb1, domain 3 PJW04_04785 IPR042102 RNA polymerase Rpb1, domain 3 superfamily PJW04_04785 IPR007083 RNA polymerase Rpb1, domain 4 PJW04_04785 IPR007081 RNA polymerase Rpb1, domain 5 PJW04_04785 IPR038120 RNA polymerase Rpb1, funnel domain superfamily PJW04_04785 IPR007080 RNA polymerase Rpb1, domain 1 PJW04_04785 IPR006592 RNA polymerase, N-terminal PJW04_04785 IPR000722 RNA polymerase, alpha subunit PJW04_04785 IPR012754 DNA-directed RNA polymerase, subunit beta-prime PJW04_04790 IPR005679 Ribosomal protein S12, bacterial-type PJW04_04790 IPR012340 Nucleic acid-binding, OB-fold PJW04_04790 IPR006032 Ribosomal protein S12/S23 PJW04_04795 IPR000235 Ribosomal protein S5/S7 PJW04_04795 IPR005717 Ribosomal protein S7, bacterial/organellar-type PJW04_04795 IPR020606 Ribosomal protein S7, conserved site PJW04_04795 IPR023798 Ribosomal protein S7 domain PJW04_04795 IPR036823 Ribosomal protein S7 domain superfamily PJW04_04800 IPR031157 Tr-type G domain, conserved site PJW04_04800 IPR041095 Elongation Factor G, domain II PJW04_04800 IPR009022 Elongation factor G, domain III PJW04_04800 IPR035649 EFG, domain V PJW04_04800 IPR000640 Elongation factor EFG, domain V-like PJW04_04800 IPR004161 Translation elongation factor EFTu-like, domain 2 PJW04_04800 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_04800 IPR035647 EF-G domain III/V-like PJW04_04800 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PJW04_04800 IPR005225 Small GTP-binding protein domain PJW04_04800 IPR000795 Transcription factor, GTP-binding domain PJW04_04800 IPR009000 Translation protein, beta-barrel domain superfamily PJW04_04800 IPR004540 Translation elongation factor EFG/EF2 PJW04_04800 IPR005517 Translation elongation factor EFG/EF2, domain IV PJW04_04800 IPR020568 Ribosomal protein S5 domain 2-type fold PJW04_04805 IPR004161 Translation elongation factor EFTu-like, domain 2 PJW04_04805 IPR033720 Elongation factor Tu, domain 2 PJW04_04805 IPR031157 Tr-type G domain, conserved site PJW04_04805 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_04805 IPR005225 Small GTP-binding protein domain PJW04_04805 IPR000795 Transcription factor, GTP-binding domain PJW04_04805 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain PJW04_04805 IPR009000 Translation protein, beta-barrel domain superfamily PJW04_04805 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle PJW04_04805 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal PJW04_04805 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal PJW04_04815 IPR036838 Ribosomal protein S10 domain superfamily PJW04_04815 IPR001848 Ribosomal protein S10 PJW04_04815 IPR018268 Ribosomal protein S10, conserved site PJW04_04815 IPR027486 Ribosomal protein S10 domain PJW04_04820 IPR000597 Ribosomal protein L3 PJW04_04820 IPR019927 Ribosomal protein L3, bacterial/organelle-type PJW04_04820 IPR019926 Ribosomal protein L3, conserved site PJW04_04820 IPR009000 Translation protein, beta-barrel domain superfamily PJW04_04825 IPR023574 Ribosomal protein L4 domain superfamily PJW04_04825 IPR013005 50S ribosomal protein uL4 PJW04_04825 IPR002136 Ribosomal protein L4/L1e PJW04_04830 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily PJW04_04830 IPR012678 Ribosomal protein L23/L15e core domain superfamily PJW04_04830 IPR013025 Ribosomal protein L25/L23 PJW04_04835 IPR022671 Ribosomal protein L2, conserved site PJW04_04835 IPR008991 Translation protein SH3-like domain superfamily PJW04_04835 IPR014726 Ribosomal protein L2, domain 3 PJW04_04835 IPR002171 Ribosomal protein L2 PJW04_04835 IPR005880 Ribosomal protein L2, bacterial/organellar-type PJW04_04835 IPR012340 Nucleic acid-binding, OB-fold PJW04_04835 IPR022669 Ribosomal protein L2, C-terminal PJW04_04835 IPR014722 Ribosomal protein L2, domain 2 PJW04_04835 IPR022666 Ribosomal Proteins L2, RNA binding domain PJW04_04840 IPR002222 Ribosomal protein S19/S15 PJW04_04840 IPR005732 Ribosomal protein S19, bacterial-type PJW04_04840 IPR020934 Ribosomal protein S19 conserved site PJW04_04840 IPR023575 Ribosomal protein S19, superfamily PJW04_04845 IPR001063 Ribosomal protein L22/L17 PJW04_04845 IPR018260 Ribosomal protein L22/L17, conserved site PJW04_04845 IPR036394 Ribosomal protein L22/L17 superfamily PJW04_04845 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type PJW04_04850 IPR018280 Ribosomal protein S3, conserved site PJW04_04850 IPR036419 Ribosomal protein S3, C-terminal domain superfamily PJW04_04850 IPR001351 Ribosomal protein S3, C-terminal PJW04_04850 IPR004044 K Homology domain, type 2 PJW04_04850 IPR009019 K homology domain superfamily, prokaryotic type PJW04_04850 IPR015946 K homology domain-like, alpha/beta PJW04_04850 IPR005704 Ribosomal protein S3, bacterial-type PJW04_04850 IPR004087 K Homology domain PJW04_04855 IPR036920 Ribosomal protein L10e/L16 superfamily PJW04_04855 IPR000114 Ribosomal protein L16 PJW04_04855 IPR020798 Ribosomal protein L16, conserved site PJW04_04855 IPR016180 Ribosomal protein L10e/L16 PJW04_04860 IPR001854 Ribosomal protein L29/L35 PJW04_04860 IPR036049 Ribosomal protein L29/L35 superfamily PJW04_04865 IPR019984 30S ribosomal protein S17 PJW04_04865 IPR012340 Nucleic acid-binding, OB-fold PJW04_04865 IPR000266 Ribosomal protein S17/S11 PJW04_04870 IPR019972 Ribosomal protein L14P, conserved site PJW04_04870 IPR036853 Ribosomal protein L14 superfamily PJW04_04870 IPR000218 Ribosomal protein L14P PJW04_04870 IPR005745 Ribosomal protein L14P, bacterial-type PJW04_04875 IPR005824 KOW PJW04_04875 IPR041988 Ribosomal Protein L26/L24, KOW domain PJW04_04875 IPR014722 Ribosomal protein L2, domain 2 PJW04_04875 IPR003256 Ribosomal protein L24 PJW04_04875 IPR008991 Translation protein SH3-like domain superfamily PJW04_04880 IPR031310 Ribosomal protein L5, N-terminal PJW04_04880 IPR022803 Ribosomal protein L5 domain superfamily PJW04_04880 IPR020929 Ribosomal protein L5, conserved site PJW04_04880 IPR002132 Ribosomal protein L5 PJW04_04880 IPR031309 Ribosomal protein L5, C-terminal PJW04_04880 IPR020930 Ribosomal protein L5, bacterial-type PJW04_04885 IPR001209 Ribosomal protein S14 PJW04_04885 IPR023036 Ribosomal protein S14, bacterial/plastid PJW04_04890 IPR000630 Ribosomal protein S8 PJW04_04890 IPR035987 Ribosomal protein S8 superfamily PJW04_04895 IPR019906 Ribosomal protein L6, bacterial-type PJW04_04895 IPR002358 Ribosomal protein L6, conserved site PJW04_04895 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily PJW04_04895 IPR000702 Ribosomal protein L6 PJW04_04895 IPR020040 Ribosomal protein L6, alpha-beta domain PJW04_04900 IPR004389 Ribosomal protein L18, bacterial-type PJW04_04900 IPR005484 Ribosomal protein L18 PJW04_04905 IPR013810 Ribosomal protein S5, N-terminal PJW04_04905 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PJW04_04905 IPR018192 Ribosomal protein S5, N-terminal, conserved site PJW04_04905 IPR005324 Ribosomal protein S5, C-terminal PJW04_04905 IPR005712 Ribosomal protein S5, bacterial-type PJW04_04905 IPR000851 Ribosomal protein S5 PJW04_04905 IPR020568 Ribosomal protein S5 domain 2-type fold PJW04_04910 IPR005996 Ribosomal protein L30, bacterial-type PJW04_04910 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain PJW04_04910 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily PJW04_04915 IPR036227 Ribosomal L18e/L15P superfamily PJW04_04915 IPR030878 Ribosomal protein L15 PJW04_04915 IPR005749 Ribosomal protein L15, bacterial-type PJW04_04915 IPR001196 Ribosomal protein L15, conserved site PJW04_04915 IPR021131 Ribosomal protein L18e/L15P PJW04_04920 IPR023201 SecY domain superfamily PJW04_04920 IPR030659 SecY conserved site PJW04_04920 IPR026593 Protein translocase subunit SecY PJW04_04920 IPR002208 SecY/SEC61-alpha family PJW04_04925 IPR001892 Ribosomal protein S13 PJW04_04925 IPR018269 Ribosomal protein S13, conserved site PJW04_04925 IPR027437 30s ribosomal protein S13, C-terminal PJW04_04925 IPR010979 Ribosomal protein S13-like, H2TH PJW04_04925 IPR019980 Ribosomal protein S13, bacterial-type PJW04_04930 IPR001971 Ribosomal protein S11 PJW04_04930 IPR019981 Ribosomal protein S11, bacterial-type PJW04_04930 IPR018102 Ribosomal S11, conserved site PJW04_04930 IPR036967 Ribosomal protein S11 superfamily PJW04_04935 IPR036986 RNA-binding S4 domain superfamily PJW04_04935 IPR002942 RNA-binding S4 domain PJW04_04935 IPR018079 Ribosomal protein S4, conserved site PJW04_04935 IPR001912 Ribosomal protein S4/S9, N-terminal PJW04_04935 IPR022801 Ribosomal protein S4/S9 PJW04_04935 IPR005709 Ribosomal protein S4, bacterial-type PJW04_04940 IPR011262 DNA-directed RNA polymerase, insert domain PJW04_04940 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type PJW04_04940 IPR011773 DNA-directed RNA polymerase, alpha subunit PJW04_04940 IPR036603 RNA polymerase, RBP11-like subunit PJW04_04940 IPR011260 RNA polymerase, alpha subunit, C-terminal PJW04_04940 IPR036643 DNA-directed RNA polymerase, insert domain superfamily PJW04_04945 IPR036373 Ribosomal protein L17 superfamily PJW04_04945 IPR000456 Ribosomal protein L17 PJW04_04950 IPR023380 DsbB-like superfamily PJW04_04950 IPR003752 Disulphide bond formation protein DsbB/BdbC PJW04_04950 IPR022920 Disulphide bond formation protein DsbB PJW04_04965 IPR013785 Aldolase-type TIM barrel PJW04_04965 IPR002480 DAHP synthetase, class II PJW04_04975 IPR000120 Amidase PJW04_04975 IPR020556 Amidase, conserved site PJW04_04975 IPR023631 Amidase signature domain PJW04_04975 IPR036928 Amidase signature (AS) superfamily PJW04_04975 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit PJW04_04985 IPR009000 Translation protein, beta-barrel domain superfamily PJW04_04985 IPR000795 Transcription factor, GTP-binding domain PJW04_04985 IPR005225 Small GTP-binding protein domain PJW04_04985 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_04985 IPR035647 EF-G domain III/V-like PJW04_04985 IPR004161 Translation elongation factor EFTu-like, domain 2 PJW04_04985 IPR000640 Elongation factor EFG, domain V-like PJW04_04985 IPR042116 GTP-binding protein TypA/BipA, C-terminal PJW04_04985 IPR031157 Tr-type G domain, conserved site PJW04_04985 IPR035651 BipA, domain V PJW04_04985 IPR006298 GTP-binding protein TypA PJW04_04990 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain PJW04_04990 IPR029000 Cyclophilin-like domain superfamily PJW04_04990 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site PJW04_04995 IPR022383 Lactate/malate dehydrogenase, C-terminal PJW04_04995 IPR036291 NAD(P)-binding domain superfamily PJW04_04995 IPR001557 L-lactate/malate dehydrogenase PJW04_04995 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal PJW04_04995 IPR010945 Malate dehydrogenase, type 2 PJW04_04995 IPR001236 Lactate/malate dehydrogenase, N-terminal PJW04_05000 IPR036249 Thioredoxin-like superfamily PJW04_05000 IPR004046 Glutathione S-transferase, C-terminal PJW04_05000 IPR040079 Glutathione Transferase family PJW04_05000 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PJW04_05000 IPR010987 Glutathione S-transferase, C-terminal-like PJW04_05000 IPR004045 Glutathione S-transferase, N-terminal PJW04_05015 IPR013785 Aldolase-type TIM barrel PJW04_05015 IPR023753 FAD/NAD(P)-binding domain PJW04_05015 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal PJW04_05015 IPR036188 FAD/NAD(P)-binding domain superfamily PJW04_05020 IPR013149 Alcohol dehydrogenase, C-terminal PJW04_05020 IPR013154 Alcohol dehydrogenase, N-terminal PJW04_05020 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 PJW04_05020 IPR011032 GroES-like superfamily PJW04_05020 IPR020843 Polyketide synthase, enoylreductase domain PJW04_05020 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site PJW04_05020 IPR036291 NAD(P)-binding domain superfamily PJW04_05025 IPR006244 Photosystem I PsaB PJW04_05025 IPR036408 Photosystem I PsaA/PsaB superfamily PJW04_05025 IPR006664 Outer membrane protein, bacterial PJW04_05025 IPR001280 Photosystem I PsaA/PsaB PJW04_05025 IPR036737 OmpA-like domain superfamily PJW04_05025 IPR006665 OmpA-like domain PJW04_05025 IPR020586 Photosystem I PsaA/PsaB, conserved site PJW04_05035 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain PJW04_05035 IPR020103 Pseudouridine synthase, catalytic domain superfamily PJW04_05035 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F PJW04_05035 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site PJW04_05035 IPR006145 Pseudouridine synthase, RsuA/RluA PJW04_05045 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase PJW04_05045 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site PJW04_05045 IPR004839 Aminotransferase, class I/classII PJW04_05045 IPR015424 Pyridoxal phosphate-dependent transferase PJW04_05045 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PJW04_05045 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PJW04_05050 IPR005669 Thiosulphate/Sulfate-binding protein PJW04_05050 IPR000957 Sulphate/thiosulphate-binding, conserved site PJW04_05050 IPR034408 Sulphate/thiosulphate-binding site PJW04_05055 IPR035906 MetI-like superfamily PJW04_05055 IPR005667 Sulphate ABC transporter permease protein 2 PJW04_05055 IPR011865 Sulphate ABC transporter, permease protein CysT PJW04_05055 IPR000515 ABC transporter type 1, transmembrane domain MetI-like PJW04_05060 IPR011866 Sulphate ABC transporter, permease protein CysW PJW04_05060 IPR000515 ABC transporter type 1, transmembrane domain MetI-like PJW04_05060 IPR035906 MetI-like superfamily PJW04_05060 IPR005667 Sulphate ABC transporter permease protein 2 PJW04_05065 IPR024765 TOBE-like domain PJW04_05065 IPR005666 Sulphate transport system permease protein 1 PJW04_05065 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_05065 IPR008995 Molybdate/tungstate binding, C-terminal PJW04_05065 IPR017871 ABC transporter, conserved site PJW04_05065 IPR003439 ABC transporter-like PJW04_05065 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal PJW04_05065 IPR003593 AAA+ ATPase domain PJW04_05065 IPR041193 CysA, C-terminal regulatory domain PJW04_05075 IPR013149 Alcohol dehydrogenase, C-terminal PJW04_05075 IPR013154 Alcohol dehydrogenase, N-terminal PJW04_05075 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site PJW04_05075 IPR011032 GroES-like superfamily PJW04_05075 IPR004627 L-threonine 3-dehydrogenase PJW04_05075 IPR036291 NAD(P)-binding domain superfamily PJW04_05075 IPR020843 Polyketide synthase, enoylreductase domain PJW04_05085 IPR006311 Twin-arginine translocation pathway, signal sequence PJW04_05085 IPR017850 Alkaline-phosphatase-like, core domain superfamily PJW04_05085 IPR007312 Phosphoesterase PJW04_05085 IPR008475 Bacterial phospholipase C, C-terminal domain PJW04_05085 IPR017767 Bacterial phospholipase C, phosphocholine-specific PJW04_05090 IPR019500 Peptidase S46 PJW04_05090 IPR009003 Peptidase S1, PA clan PJW04_05095 IPR013078 Histidine phosphatase superfamily, clade-1 PJW04_05095 IPR029033 Histidine phosphatase superfamily PJW04_05100 IPR001645 Folylpolyglutamate synthetase PJW04_05100 IPR018109 Folylpolyglutamate synthetase, conserved site PJW04_05100 IPR036565 Mur-like, catalytic domain superfamily PJW04_05100 IPR004101 Mur ligase, C-terminal PJW04_05100 IPR013221 Mur ligase, central PJW04_05100 IPR036615 Mur ligase, C-terminal domain superfamily PJW04_05115 IPR017932 Glutamine amidotransferase type 2 domain PJW04_05115 IPR029055 Nucleophile aminohydrolases, N-terminal PJW04_05115 IPR000836 Phosphoribosyltransferase domain PJW04_05115 IPR029057 Phosphoribosyltransferase-like PJW04_05115 IPR005854 Amidophosphoribosyltransferase PJW04_05115 IPR035584 Amidophosphoribosyltransferase, N-terminal PJW04_05120 IPR011197 Uncharacterised conserved protein UCP012318 PJW04_05120 IPR009078 Ferritin-like superfamily PJW04_05120 IPR007402 Protein of unknown function DUF455 PJW04_05125 IPR024079 Metallopeptidase, catalytic domain superfamily PJW04_05135 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type PJW04_05135 IPR029052 Metallo-dependent phosphatase-like PJW04_05135 IPR010138 UDP-2,3-diacylglucosamine hydrolase PJW04_05140 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily PJW04_05140 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PJW04_05145 IPR001296 Glycosyl transferase, family 1 PJW04_05145 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain PJW04_05150 IPR022371 Exopolyphosphatase PJW04_05150 IPR003695 Ppx/GppA phosphatase PJW04_05150 IPR030673 Pyrophosphatase, GppA/Ppx-type PJW04_05155 IPR036832 Polyphosphate kinase N-terminal domain superfamily PJW04_05155 IPR025198 Polyphosphate kinase N-terminal domain PJW04_05155 IPR024953 Polyphosphate kinase middle domain PJW04_05155 IPR036830 Polyphosphate kinase middle domain superfamily PJW04_05155 IPR041108 Polyphosphate kinase, C-terminal domain 1 PJW04_05155 IPR025200 Polyphosphate kinase C-terminal domain 2 PJW04_05155 IPR003414 Polyphosphate kinase PJW04_05160 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR PJW04_05160 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW04_05160 IPR021766 Phosphate regulon sensor protein PhoR PJW04_05160 IPR013767 PAS fold PJW04_05160 IPR000014 PAS domain PJW04_05160 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PJW04_05160 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PJW04_05160 IPR005467 Histidine kinase domain PJW04_05160 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_05160 IPR035965 PAS domain superfamily PJW04_05160 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_05165 IPR039420 Transcriptional regulatory protein WalR-like PJW04_05165 IPR001789 Signal transduction response regulator, receiver domain PJW04_05165 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_05165 IPR001867 OmpR/PhoB-type DNA-binding domain PJW04_05165 IPR011006 CheY-like superfamily PJW04_05165 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB PJW04_05165 IPR016032 Signal transduction response regulator, C-terminal effector PJW04_05170 IPR001915 Peptidase M48 PJW04_05170 IPR030873 Beta-barrel assembly-enhancing protease PJW04_05170 IPR013026 Tetratricopeptide repeat-containing domain PJW04_05170 IPR011990 Tetratricopeptide-like helical domain superfamily PJW04_05170 IPR019734 Tetratricopeptide repeat PJW04_05175 IPR011767 Glutaredoxin active site PJW04_05175 IPR002109 Glutaredoxin PJW04_05175 IPR014025 Glutaredoxin subgroup PJW04_05175 IPR036249 Thioredoxin-like superfamily PJW04_05175 IPR011900 Glutaredoxin, GrxC PJW04_05185 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site PJW04_05185 IPR024084 Isopropylmalate dehydrogenase-like domain PJW04_05185 IPR040978 Hypothetical protein TT1725 PJW04_05215 IPR000014 PAS domain PJW04_05215 IPR003660 HAMP domain PJW04_05215 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_05215 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_05215 IPR005467 Histidine kinase domain PJW04_05215 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PJW04_05215 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PJW04_05215 IPR000700 PAS-associated, C-terminal PJW04_05215 IPR035965 PAS domain superfamily PJW04_05215 IPR013767 PAS fold PJW04_05215 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW04_05225 IPR008881 Trigger factor, ribosome-binding, bacterial PJW04_05225 IPR037041 Trigger factor, C-terminal domain superfamily PJW04_05225 IPR036611 Trigger factor ribosome-binding domain superfamily PJW04_05225 IPR005215 Trigger factor PJW04_05225 IPR027304 Trigger factor/SurA domain superfamily PJW04_05225 IPR008880 Trigger factor, C-terminal PJW04_05230 IPR018215 ClpP, Ser active site PJW04_05230 IPR033135 ClpP, histidine active site PJW04_05230 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA PJW04_05230 IPR001907 ATP-dependent Clp protease proteolytic subunit PJW04_05230 IPR029045 ClpP/crotonase-like domain superfamily PJW04_05235 IPR003593 AAA+ ATPase domain PJW04_05235 IPR003959 ATPase, AAA-type, core PJW04_05235 IPR019489 Clp ATPase, C-terminal PJW04_05235 IPR004487 Clp protease, ATP-binding subunit ClpX PJW04_05235 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_05235 IPR010603 Zinc finger, ClpX C4-type PJW04_05235 IPR038366 Zinc finger, ClpX C4-type superfamily PJW04_05240 IPR015947 PUA-like superfamily PJW04_05240 IPR008269 Peptidase S16, Lon proteolytic domain PJW04_05240 IPR008268 Peptidase S16, active site PJW04_05240 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_05240 IPR003111 Lon, substrate-binding domain PJW04_05240 IPR027065 Lon protease PJW04_05240 IPR004815 Lon protease, bacterial/eukaryotic-type PJW04_05240 IPR027543 Lon protease, bacterial PJW04_05240 IPR003959 ATPase, AAA-type, core PJW04_05240 IPR003593 AAA+ ATPase domain PJW04_05240 IPR020568 Ribosomal protein S5 domain 2-type fold PJW04_05240 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PJW04_05245 IPR020816 Histone-like DNA-binding protein, conserved site PJW04_05245 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily PJW04_05245 IPR000119 Histone-like DNA-binding protein PJW04_05265 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type PJW04_05265 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site PJW04_05270 IPR007921 CHAP domain PJW04_05270 IPR036779 LysM domain superfamily PJW04_05270 IPR018392 LysM domain PJW04_05270 IPR038765 Papain-like cysteine peptidase superfamily PJW04_05275 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain PJW04_05275 IPR001279 Metallo-beta-lactamase PJW04_05275 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PJW04_05275 IPR017782 Hydroxyacylglutathione hydrolase PJW04_05275 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain PJW04_05285 IPR002156 Ribonuclease H domain PJW04_05285 IPR036397 Ribonuclease H superfamily PJW04_05285 IPR022892 Ribonuclease HI PJW04_05285 IPR012337 Ribonuclease H-like superfamily PJW04_05290 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain PJW04_05290 IPR012337 Ribonuclease H-like superfamily PJW04_05290 IPR036397 Ribonuclease H superfamily PJW04_05290 IPR006309 DNA polymerase 3, epsilon subunit PJW04_05290 IPR013520 Exonuclease, RNase T/DNA polymerase III PJW04_05295 IPR001932 PPM-type phosphatase domain PJW04_05295 IPR036457 PPM-type phosphatase domain superfamily PJW04_05295 IPR015655 Protein phosphatase 2C family PJW04_05310 IPR039459 RepB-like DNA primase domain PJW04_05310 IPR005053 MobA/MobL protein PJW04_05355 IPR002201 Glycosyl transferase, family 9 PJW04_05360 IPR011009 Protein kinase-like domain superfamily PJW04_05360 IPR022826 3-deoxy-D-manno-octulosonic acid kinase PJW04_05365 IPR001279 Metallo-beta-lactamase PJW04_05365 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PJW04_05365 IPR013471 Ribonuclease Z/BN PJW04_05370 IPR013483 Molybdenum cofactor biosynthesis protein A PJW04_05370 IPR007197 Radical SAM PJW04_05370 IPR010505 Molybdenum cofactor synthesis C-terminal PJW04_05370 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site PJW04_05370 IPR006638 Elp3/MiaB/NifB PJW04_05370 IPR013785 Aldolase-type TIM barrel PJW04_05380 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily PJW04_05380 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain PJW04_05380 IPR023045 Molybdenum cofactor biosynthesis C PJW04_05385 IPR012675 Beta-grasp domain superfamily PJW04_05385 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp PJW04_05385 IPR003749 Sulfur carrier ThiS/MoaD-like PJW04_05390 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily PJW04_05390 IPR003448 Molybdopterin biosynthesis MoaE PJW04_05475 IPR037518 MPN domain PJW04_05475 IPR025657 RadC-like JAB domain PJW04_05475 IPR010994 RuvA domain 2-like PJW04_05475 IPR001405 Uncharacterised protein family UPF0758 PJW04_05475 IPR020891 Uncharacterised protein family UPF0758, conserved site PJW04_05520 IPR018669 Toxin-antitoxin system, toxin component, HigB, putative PJW04_05540 IPR012763 DNA polymerase III, subunit gamma/ tau PJW04_05540 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily PJW04_05540 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_05540 IPR021029 DNA polymerase III, tau subunit, domain V PJW04_05540 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV PJW04_05540 IPR001270 ClpA/B family PJW04_05540 IPR003593 AAA+ ATPase domain PJW04_05540 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal PJW04_05540 IPR022754 DNA polymerase III, gamma subunit, domain III PJW04_05545 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily PJW04_05545 IPR004401 Nucleoid-associated protein YbaB/EbfC family PJW04_05550 IPR006171 TOPRIM domain PJW04_05550 IPR023628 Recombination protein RecR, C4-type zinc finger PJW04_05550 IPR015967 Recombination protein RecR, conserved site PJW04_05550 IPR000093 DNA recombination protein RecR PJW04_05550 IPR023627 Recombination protein RecR PJW04_05550 IPR034137 RecR, TOPRIM domain PJW04_05555 IPR001310 Histidine triad (HIT) protein PJW04_05555 IPR011146 HIT-like domain PJW04_05555 IPR019808 Histidine triad, conserved site PJW04_05555 IPR036265 HIT-like superfamily PJW04_05565 IPR002931 Transglutaminase-like PJW04_05565 IPR025403 Domain of unknown function DUF4129 PJW04_05565 IPR038765 Papain-like cysteine peptidase superfamily PJW04_05565 IPR021878 Protein-glutamine gamma-glutamyltransferase TgpA, N-terminal PJW04_05575 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_05575 IPR011703 ATPase, AAA-3 PJW04_05575 IPR041628 ChlI/MoxR, AAA lid domain PJW04_05590 IPR029001 Inosine triphosphate pyrophosphatase-like PJW04_05590 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein PJW04_05595 IPR003772 Large ribosomal RNA subunit accumulation protein YceD PJW04_05595 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria PJW04_05600 IPR002677 Ribosomal protein L32p PJW04_05600 IPR011332 Zinc-binding ribosomal protein PJW04_05605 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III PJW04_05605 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 PJW04_05605 IPR016039 Thiolase-like PJW04_05605 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal PJW04_05615 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase PJW04_05615 IPR014043 Acyl transferase PJW04_05615 IPR024925 Malonyl CoA-acyl carrier protein transacylase PJW04_05615 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type PJW04_05615 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding PJW04_05615 IPR001227 Acyl transferase domain superfamily PJW04_05620 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase PJW04_05620 IPR036291 NAD(P)-binding domain superfamily PJW04_05620 IPR020904 Short-chain dehydrogenase/reductase, conserved site PJW04_05620 IPR002347 Short-chain dehydrogenase/reductase SDR PJW04_05625 IPR036736 ACP-like superfamily PJW04_05625 IPR003231 Acyl carrier protein (ACP) PJW04_05625 IPR009081 Phosphopantetheine binding ACP domain PJW04_05625 IPR006162 Phosphopantetheine attachment site PJW04_05630 IPR018201 Beta-ketoacyl synthase, active site PJW04_05630 IPR000794 Beta-ketoacyl synthase PJW04_05630 IPR016039 Thiolase-like PJW04_05630 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain PJW04_05630 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 PJW04_05630 IPR014031 Beta-ketoacyl synthase, C-terminal PJW04_05630 IPR014030 Beta-ketoacyl synthase, N-terminal PJW04_05635 IPR005801 ADC synthase PJW04_05635 IPR019999 Anthranilate synthase component I-like PJW04_05635 IPR006805 Anthranilate synthase component I, N-terminal PJW04_05635 IPR015890 Chorismate-utilising enzyme, C-terminal PJW04_05635 IPR010118 Para-aminobenzoate synthase/anthranilate synthase, component I PJW04_05640 IPR003770 Endolytic murein transglycosylase PJW04_05645 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_05645 IPR015199 DNA polymerase III, delta subunit, C-terminal PJW04_05645 IPR004622 DNA polymerase III, delta prime subunit PJW04_05670 IPR009057 Homeobox-like domain superfamily PJW04_05670 IPR002197 DNA binding HTH domain, Fis-type PJW04_05670 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_05670 IPR012704 Signal transduction response regulator, propionate catabolism, transcriptional regulator PrpR PJW04_05670 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal PJW04_05670 IPR002078 RNA polymerase sigma factor 54 interaction domain PJW04_05670 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PJW04_05670 IPR025944 Sigma-54 interaction domain, conserved site PJW04_05670 IPR003593 AAA+ ATPase domain PJW04_05675 IPR040442 Pyruvate kinase-like domain superfamily PJW04_05675 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily PJW04_05675 IPR012695 2-methylisocitrate lyase PJW04_05675 IPR039556 ICL/PEPM domain PJW04_05675 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site PJW04_05680 IPR011278 2-methylcitrate synthase/citrate synthase type I PJW04_05680 IPR016142 Citrate synthase-like, large alpha subdomain PJW04_05680 IPR016143 Citrate synthase-like, small alpha subdomain PJW04_05680 IPR002020 Citrate synthase PJW04_05680 IPR019810 Citrate synthase active site PJW04_05680 IPR024176 Citrate synthase, bacterial-type PJW04_05680 IPR036969 Citrate synthase superfamily PJW04_05685 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain PJW04_05685 IPR036008 Aconitase, iron-sulfur domain PJW04_05685 IPR006249 Aconitase/Iron-responsive element-binding protein 2 PJW04_05685 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel PJW04_05685 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 PJW04_05685 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent PJW04_05685 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain PJW04_05695 IPR012709 2-methyl-aconitate isomerase PrpF PJW04_05695 IPR007400 PrpF protein PJW04_05700 IPR039426 Vitamin B12 transporter BtuB-like PJW04_05700 IPR012910 TonB-dependent receptor, plug domain PJW04_05700 IPR000531 TonB-dependent receptor-like, beta-barrel PJW04_05700 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PJW04_05700 IPR010105 TonB-dependent siderophore receptor PJW04_05710 IPR002890 Macroglobulin domain PJW04_05710 IPR001599 Alpha-2-macroglobulin PJW04_05710 IPR026284 Alpha-2-macroglobulin, bacteria PJW04_05710 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid PJW04_05710 IPR041246 Bacterial alpha-2-macroglobulin MG10 domain PJW04_05710 IPR041462 Bacterial Alpha-2-macroglobulin, MG6 domain PJW04_05710 IPR041203 Bacterial Alpha-2-macroglobulin, MG5 domain PJW04_05710 IPR021868 Alpha-2-macroglobulin MG3 domain PJW04_05710 IPR040639 Alpha-2-macroglobulin, MG1 domain PJW04_05710 IPR011625 Alpha-2-macroglobulin, bait region domain PJW04_05725 IPR001264 Glycosyl transferase, family 51 PJW04_05725 IPR023346 Lysozyme-like domain superfamily PJW04_05725 IPR011815 Penicillin-binding protein 1C PJW04_05725 IPR012338 Beta-lactamase/transpeptidase-like PJW04_05725 IPR009647 Penicillin-binding, C-terminal PJW04_05725 IPR036950 Penicillin binding protein transglycosylase domain PJW04_05725 IPR001460 Penicillin-binding protein, transpeptidase PJW04_05735 IPR037944 Peroxiredoxin-5-like PJW04_05735 IPR013740 Redoxin PJW04_05735 IPR036249 Thioredoxin-like superfamily PJW04_05735 IPR013766 Thioredoxin domain PJW04_05745 IPR001623 DnaJ domain PJW04_05745 IPR018253 DnaJ domain, conserved site PJW04_05745 IPR008971 HSP40/DnaJ peptide-binding PJW04_05745 IPR023859 DNA-binding protein, curved-DNA PJW04_05745 IPR036869 Chaperone J-domain superfamily PJW04_05745 IPR002939 Chaperone DnaJ, C-terminal PJW04_05750 IPR001789 Signal transduction response regulator, receiver domain PJW04_05750 IPR011006 CheY-like superfamily PJW04_05755 IPR036013 Band 7/SPFH domain superfamily PJW04_05755 IPR001972 Stomatin family PJW04_05755 IPR020980 Menbrane protein HflK, N-terminal PJW04_05755 IPR010201 HflK PJW04_05755 IPR001107 Band 7 domain PJW04_05760 IPR010200 HflC PJW04_05760 IPR036013 Band 7/SPFH domain superfamily PJW04_05760 IPR001107 Band 7 domain PJW04_05770 IPR033128 Adenylosuccinate synthase, active site PJW04_05770 IPR042109 Adenylosuccinate synthetase, domain 1 PJW04_05770 IPR042111 Adenylosuccinate synthetase, domain 3 PJW04_05770 IPR018220 Adenylosuccinate synthase, GTP-binding site PJW04_05770 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_05770 IPR001114 Adenylosuccinate synthetase PJW04_05770 IPR042110 Adenylosuccinate synthetase, domain 2 PJW04_05775 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase PJW04_05775 IPR034016 Aminopeptidase N-type PJW04_05775 IPR024571 ERAP1-like C-terminal domain PJW04_05775 IPR042097 Aminopeptidase N-like , N-terminal PJW04_05775 IPR014782 Peptidase M1, membrane alanine aminopeptidase PJW04_05785 IPR002347 Short-chain dehydrogenase/reductase SDR PJW04_05785 IPR036291 NAD(P)-binding domain superfamily PJW04_05785 IPR020904 Short-chain dehydrogenase/reductase, conserved site PJW04_05790 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PJW04_05790 IPR009057 Homeobox-like domain superfamily PJW04_05790 IPR001647 DNA-binding HTH domain, TetR-type PJW04_05790 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PJW04_05805 IPR000055 Restriction endonuclease, type I, HsdS PJW04_05810 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW04_05810 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily PJW04_05810 IPR003356 DNA methylase, adenine-specific PJW04_05810 IPR002052 DNA methylase, N-6 adenine-specific, conserved site PJW04_05815 IPR003812 Fido domain PJW04_05815 IPR036597 Fido-like domain superfamily PJW04_05815 IPR032675 Leucine-rich repeat domain superfamily PJW04_05815 IPR003591 Leucine-rich repeat, typical subtype PJW04_05820 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal PJW04_05820 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_05820 IPR001650 Helicase, C-terminal PJW04_05820 IPR014001 Helicase superfamily 1/2, ATP-binding domain PJW04_05820 IPR006935 Helicase/UvrB, N-terminal PJW04_05820 IPR013670 EcoEI R protein C-terminal domain PJW04_05845 IPR012337 Ribonuclease H-like superfamily PJW04_05845 IPR036397 Ribonuclease H superfamily PJW04_05845 IPR029033 Histidine phosphatase superfamily PJW04_05845 IPR013078 Histidine phosphatase superfamily, clade-1 PJW04_05845 IPR014636 RNase H, phosphoglycerate mutase domain-containing PJW04_05845 IPR002156 Ribonuclease H domain PJW04_05850 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase PJW04_05850 IPR029056 Ribokinase-like PJW04_05860 IPR008928 Six-hairpin glycosidase superfamily PJW04_05860 IPR012341 Six-hairpin glycosidase-like superfamily PJW04_05860 IPR011613 GH15-like domain PJW04_05865 IPR036291 NAD(P)-binding domain superfamily PJW04_05865 IPR020904 Short-chain dehydrogenase/reductase, conserved site PJW04_05865 IPR002347 Short-chain dehydrogenase/reductase SDR PJW04_05870 IPR012939 Glycosyl hydrolase family 92 PJW04_05870 IPR014718 Glycoside hydrolase-type carbohydrate-binding PJW04_05870 IPR041371 Glycosyl hydrolase family 92 N-terminal domain PJW04_05870 IPR008928 Six-hairpin glycosidase superfamily PJW04_05870 IPR005887 Alpha-1,2-mannosidase, putative PJW04_05880 IPR036291 NAD(P)-binding domain superfamily PJW04_05880 IPR020904 Short-chain dehydrogenase/reductase, conserved site PJW04_05880 IPR002347 Short-chain dehydrogenase/reductase SDR PJW04_05890 IPR036188 FAD/NAD(P)-binding domain superfamily PJW04_05890 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site PJW04_05890 IPR005982 Thioredoxin reductase PJW04_05890 IPR023753 FAD/NAD(P)-binding domain PJW04_05910 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_05910 IPR041552 UvrA DNA-binding domain PJW04_05910 IPR017871 ABC transporter, conserved site PJW04_05915 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PJW04_05915 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily PJW04_05915 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding PJW04_05915 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily PJW04_05920 IPR002346 Molybdopterin dehydrogenase, FAD-binding PJW04_05920 IPR016166 FAD-binding domain, PCMH-type PJW04_05920 IPR005107 CO dehydrogenase flavoprotein, C-terminal PJW04_05920 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily PJW04_05920 IPR016169 FAD-binding, type PCMH, subdomain 2 PJW04_05920 IPR036318 FAD-binding, type PCMH-like superfamily PJW04_05925 IPR002888 [2Fe-2S]-binding PJW04_05925 IPR006311 Twin-arginine translocation pathway, signal sequence PJW04_05925 IPR012675 Beta-grasp domain superfamily PJW04_05925 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain PJW04_05925 IPR036884 [2Fe-2S]-binding domain superfamily PJW04_05925 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site PJW04_05925 IPR036010 2Fe-2S ferredoxin-like superfamily PJW04_05960 IPR039418 LexA-like PJW04_05960 IPR036390 Winged helix DNA-binding domain superfamily PJW04_05960 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_05960 IPR006200 Transcription regulator LexA PJW04_05960 IPR006197 Peptidase S24, LexA-like PJW04_05960 IPR036286 LexA/Signal peptidase-like superfamily PJW04_05960 IPR015927 Peptidase S24/S26A/S26B/S26C PJW04_05960 IPR006199 LexA repressor, DNA-binding domain PJW04_05975 IPR040982 DNA polymerase III alpha subunit finger domain PJW04_05975 IPR023073 DNA polymerase, error-prone PJW04_05975 IPR029460 DNA polymerase, helix-hairpin-helix motif PJW04_05975 IPR004013 PHP domain PJW04_05975 IPR003141 Polymerase/histidinol phosphatase, N-terminal PJW04_05975 IPR004805 DNA polymerase III, alpha subunit PJW04_05975 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain PJW04_05975 IPR016195 Polymerase/histidinol phosphatase-like PJW04_05980 IPR011042 Six-bladed beta-propeller, TolB-like PJW04_05980 IPR029058 Alpha/Beta hydrolase fold PJW04_05980 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain PJW04_05990 IPR004814 Oligopeptide transporter OPT PJW04_05990 IPR004813 Oligopeptide transporter, OPT superfamily PJW04_06005 IPR011659 WD40-like Beta Propeller PJW04_06005 IPR029058 Alpha/Beta hydrolase fold PJW04_06005 IPR002469 Dipeptidylpeptidase IV, N-terminal domain PJW04_06005 IPR011042 Six-bladed beta-propeller, TolB-like PJW04_06005 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain PJW04_06020 IPR009057 Homeobox-like domain superfamily PJW04_06020 IPR003313 AraC-type arabinose-binding/dimerisation domain PJW04_06020 IPR014710 RmlC-like jelly roll fold PJW04_06020 IPR018060 DNA binding HTH domain, AraC-type PJW04_06020 IPR037923 Transcription regulator HTH-like PJW04_06045 IPR024712 Catalase, mono-functional, haem-containing, clade 2 PJW04_06045 IPR011614 Catalase core domain PJW04_06045 IPR037060 Catalase core domain superfamily PJW04_06045 IPR002226 Catalase haem-binding site PJW04_06045 IPR018028 Catalase, mono-functional, haem-containing PJW04_06045 IPR041399 Large catalase, C-terminal domain PJW04_06045 IPR020835 Catalase superfamily PJW04_06045 IPR029062 Class I glutamine amidotransferase-like PJW04_06045 IPR024708 Catalase active site PJW04_06045 IPR010582 Catalase immune-responsive domain PJW04_06050 IPR020471 Aldo/keto reductase PJW04_06050 IPR023210 NADP-dependent oxidoreductase domain PJW04_06050 IPR036812 NADP-dependent oxidoreductase domain superfamily PJW04_06055 IPR002018 Carboxylesterase, type B PJW04_06055 IPR019826 Carboxylesterase type B, active site PJW04_06055 IPR029058 Alpha/Beta hydrolase fold PJW04_06060 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PJW04_06060 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PJW04_06060 IPR015424 Pyridoxal phosphate-dependent transferase PJW04_06060 IPR020581 Glycine cleavage system P protein PJW04_06060 IPR003437 Glycine dehydrogenase (decarboxylating) PJW04_06080 IPR039421 Type I protein exporter PJW04_06080 IPR005074 Peptidase C39, bacteriocin processing PJW04_06080 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_06080 IPR036640 ABC transporter type 1, transmembrane domain superfamily PJW04_06080 IPR017871 ABC transporter, conserved site PJW04_06080 IPR003439 ABC transporter-like PJW04_06080 IPR033838 Colicin V processing peptidase PJW04_06080 IPR011527 ABC transporter type 1, transmembrane domain PJW04_06080 IPR003593 AAA+ ATPase domain PJW04_06085 IPR004734 Multidrug resistance protein PJW04_06085 IPR036259 MFS transporter superfamily PJW04_06085 IPR004812 Drug resistance transporter Bcr/CmlA subfamily PJW04_06085 IPR011701 Major facilitator superfamily PJW04_06085 IPR020846 Major facilitator superfamily domain PJW04_06100 IPR017850 Alkaline-phosphatase-like, core domain superfamily PJW04_06100 IPR040423 Phosphoethanolamine transferase PJW04_06100 IPR000917 Sulfatase, N-terminal PJW04_06100 IPR012549 Phosphoethanolamine transferase, N-terminal PJW04_06115 IPR011006 CheY-like superfamily PJW04_06115 IPR001867 OmpR/PhoB-type DNA-binding domain PJW04_06115 IPR001789 Signal transduction response regulator, receiver domain PJW04_06115 IPR039420 Transcriptional regulatory protein WalR-like PJW04_06115 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_06120 IPR003660 HAMP domain PJW04_06120 IPR013727 Two-component sensor kinase, N-terminal PJW04_06120 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_06120 IPR005467 Histidine kinase domain PJW04_06120 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PJW04_06120 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PJW04_06120 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW04_06120 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_06130 IPR005527 Cell division topological specificity factor MinE PJW04_06130 IPR036707 Cell division topological specificity factor MinE superfamily PJW04_06135 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain PJW04_06135 IPR010223 ATP binding protein MinD, bacterial-type PJW04_06135 IPR025501 ATP binding protein MinD PJW04_06135 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_06140 IPR005526 Septum formation inhibitor MinC, C-terminal PJW04_06140 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily PJW04_06140 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal PJW04_06140 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily PJW04_06140 IPR013033 Septum formation inhibitor MinC PJW04_06140 IPR007874 Septum formation inhibitor MinC, N-terminal PJW04_06150 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_06150 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_06150 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain PJW04_06155 IPR000792 Transcription regulator LuxR, C-terminal PJW04_06155 IPR011006 CheY-like superfamily PJW04_06155 IPR016032 Signal transduction response regulator, C-terminal effector PJW04_06155 IPR001789 Signal transduction response regulator, receiver domain PJW04_06170 IPR011257 DNA glycosylase PJW04_06170 IPR003265 HhH-GPD domain PJW04_06195 IPR011761 ATP-grasp fold PJW04_06195 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type PJW04_06195 IPR013815 ATP-grasp fold, subdomain 1 PJW04_06195 IPR016185 Pre-ATP-grasp domain superfamily PJW04_06195 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase PJW04_06195 IPR011054 Rudiment single hybrid motif PJW04_06215 IPR007471 N-end aminoacyl transferase, N-terminal PJW04_06215 IPR016181 Acyl-CoA N-acyltransferase PJW04_06215 IPR030700 N-end rule aminoacyl transferase PJW04_06215 IPR017138 Aspartate/glutamate leucyltransferase PJW04_06215 IPR007472 N-end rule aminoacyl transferase, C-terminal PJW04_06230 IPR013324 RNA polymerase sigma factor, region 3/4-like PJW04_06230 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_06230 IPR013325 RNA polymerase sigma factor, region 2 PJW04_06230 IPR014284 RNA polymerase sigma-70 like domain PJW04_06230 IPR007627 RNA polymerase sigma-70 region 2 PJW04_06230 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site PJW04_06230 IPR039425 RNA polymerase sigma-70 like PJW04_06230 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 PJW04_06240 IPR003703 Acyl-CoA thioesterase PJW04_06240 IPR029069 HotDog domain superfamily PJW04_06245 IPR029045 ClpP/crotonase-like domain superfamily PJW04_06245 IPR001753 Enoyl-CoA hydratase/isomerase PJW04_06255 IPR029069 HotDog domain superfamily PJW04_06255 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family PJW04_06260 IPR017871 ABC transporter, conserved site PJW04_06260 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_06260 IPR004602 UvrABC system subunit A PJW04_06260 IPR041552 UvrA DNA-binding domain PJW04_06260 IPR041102 UvrA, interaction domain PJW04_06260 IPR003439 ABC transporter-like PJW04_06265 IPR018258 Ribosomal protein L21, conserved site PJW04_06265 IPR001787 Ribosomal protein L21 PJW04_06265 IPR036164 L21-like superfamily PJW04_06265 IPR028909 Ribosomal protein L21-like PJW04_06270 IPR001684 Ribosomal protein L27 PJW04_06270 IPR018261 Ribosomal protein L27, conserved site PJW04_06275 IPR035101 GTP-binding protein, Obg-type PJW04_06275 IPR014100 GTP-binding protein Obg/CgtA PJW04_06275 IPR006074 GTP1/OBG, conserved site PJW04_06275 IPR006169 GTP1/OBG domain PJW04_06275 IPR036726 GTP1/OBG domain superfamily PJW04_06275 IPR006073 GTP binding domain PJW04_06275 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_06275 IPR031167 OBG-type guanine nucleotide-binding (G) domain PJW04_06280 IPR002583 Ribosomal protein S20 PJW04_06280 IPR036510 Ribosomal protein S20 superfamily PJW04_06285 IPR004268 Peptidoglycan biosynthesis protein MurJ PJW04_06290 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PJW04_06290 IPR015864 FAD synthetase PJW04_06290 IPR023468 Riboflavin kinase PJW04_06290 IPR002606 Riboflavin kinase, bacterial PJW04_06290 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic PJW04_06290 IPR023465 Riboflavin kinase domain superfamily PJW04_06295 IPR002300 Aminoacyl-tRNA synthetase, class Ia PJW04_06295 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain PJW04_06295 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding PJW04_06295 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PJW04_06295 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding PJW04_06295 IPR023585 Isoleucine-tRNA ligase, type 1 PJW04_06295 IPR010663 Zinc finger, FPG/IleRS-type PJW04_06295 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain PJW04_06295 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site PJW04_06295 IPR002301 Isoleucine-tRNA ligase PJW04_06300 IPR001872 Peptidase A8, signal peptidase II PJW04_06305 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase PJW04_06315 IPR002429 Cytochrome c oxidase subunit II-like C-terminal PJW04_06315 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily PJW04_06315 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain PJW04_06315 IPR008972 Cupredoxin PJW04_06315 IPR034227 Ubiquinol oxidase subunit 2, cupredoxin domain PJW04_06315 IPR006333 Cytochrome o ubiquinol oxidase subunit II PJW04_06315 IPR010514 COX aromatic rich motif PJW04_06320 IPR014207 Cytochrome o ubiquinol oxidase, subunit I PJW04_06320 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site PJW04_06320 IPR000883 Cytochrome c oxidase subunit I PJW04_06320 IPR036927 Cytochrome c oxidase-like, subunit I superfamily PJW04_06320 IPR023616 Cytochrome c oxidase-like, subunit I domain PJW04_06325 IPR033946 Ubiquinol oxidase subunit III domain PJW04_06325 IPR014206 Cytochrome o ubiquinol oxidase, subunit III PJW04_06325 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle PJW04_06325 IPR035973 Cytochrome c oxidase subunit III-like superfamily PJW04_06325 IPR000298 Cytochrome c oxidase subunit III-like PJW04_06325 IPR024791 Cytochrome c oxidase subunit III PJW04_06330 IPR014210 Cytochrome o ubiquinol oxidase subunit IV PJW04_06330 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes PJW04_06340 IPR003593 AAA+ ATPase domain PJW04_06340 IPR004504 DNA repair protein RadA PJW04_06340 IPR020568 Ribosomal protein S5 domain 2-type fold PJW04_06340 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PJW04_06340 IPR041166 LapB, rubredoxin metal binding domain PJW04_06340 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain PJW04_06340 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_06345 IPR008523 Protein of unknown function DUF805 PJW04_06355 IPR018060 DNA binding HTH domain, AraC-type PJW04_06355 IPR018062 HTH domain AraC-type, conserved site PJW04_06360 IPR020575 Heat shock protein Hsp90, N-terminal PJW04_06360 IPR020568 Ribosomal protein S5 domain 2-type fold PJW04_06360 IPR001404 Heat shock protein Hsp90 family PJW04_06360 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_06360 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_06360 IPR037196 HSP90, C-terminal domain PJW04_06370 IPR036513 STAS domain superfamily PJW04_06370 IPR002645 STAS domain PJW04_06370 IPR014792 RsbS co-antagonist protein RsbRA N-terminal domain PJW04_06370 IPR012292 Globin/Protoglobin PJW04_06375 IPR036513 STAS domain superfamily PJW04_06375 IPR002645 STAS domain PJW04_06380 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_06380 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_06390 IPR011006 CheY-like superfamily PJW04_06390 IPR003660 HAMP domain PJW04_06390 IPR001789 Signal transduction response regulator, receiver domain PJW04_06390 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain PJW04_06390 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PJW04_06390 IPR033414 Periplasmic sensor domain PJW04_06390 IPR036641 HPT domain superfamily PJW04_06390 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PJW04_06390 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_06390 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_06390 IPR005467 Histidine kinase domain PJW04_06390 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW04_06395 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_06395 IPR035965 PAS domain superfamily PJW04_06395 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_06395 IPR011006 CheY-like superfamily PJW04_06395 IPR005467 Histidine kinase domain PJW04_06395 IPR000014 PAS domain PJW04_06395 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PJW04_06395 IPR013656 PAS fold-4 PJW04_06395 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW04_06395 IPR001789 Signal transduction response regulator, receiver domain PJW04_06395 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PJW04_06400 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily PJW04_06400 IPR006710 Glycoside hydrolase, family 43 PJW04_06400 IPR041542 Beta-xylosidase, C-terminal Concanavalin A-like domain PJW04_06400 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily PJW04_06405 IPR000531 TonB-dependent receptor-like, beta-barrel PJW04_06405 IPR012910 TonB-dependent receptor, plug domain PJW04_06405 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PJW04_06405 IPR039426 Vitamin B12 transporter BtuB-like PJW04_06405 IPR010105 TonB-dependent siderophore receptor PJW04_06410 IPR013766 Thioredoxin domain PJW04_06410 IPR036249 Thioredoxin-like superfamily PJW04_06410 IPR005746 Thioredoxin PJW04_06410 IPR017937 Thioredoxin, conserved site PJW04_06415 IPR011008 Dimeric alpha-beta barrel PJW04_06415 IPR009874 Protein of unknown function DUF1428 PJW04_06420 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_06420 IPR005467 Histidine kinase domain PJW04_06420 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PJW04_06420 IPR025201 Sensor protein KdpD, transmembrane domain PJW04_06420 IPR038318 KdpD, transmembrane domain superfamily PJW04_06420 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW04_06420 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal PJW04_06420 IPR029016 GAF-like domain superfamily PJW04_06420 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PJW04_06420 IPR003018 GAF domain PJW04_06420 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_06425 IPR035909 Methylesterase CheB, C-terminal PJW04_06425 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase PJW04_06430 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal PJW04_06430 IPR000780 MCP methyltransferase, CheR-type PJW04_06430 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal PJW04_06430 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW04_06435 IPR019247 Histidine kinase BarA, N-terminal PJW04_06435 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW04_06435 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain PJW04_06435 IPR001789 Signal transduction response regulator, receiver domain PJW04_06435 IPR011006 CheY-like superfamily PJW04_06435 IPR003660 HAMP domain PJW04_06435 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_06435 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_06435 IPR005467 Histidine kinase domain PJW04_06435 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PJW04_06435 IPR036641 HPT domain superfamily PJW04_06435 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PJW04_06440 IPR005467 Histidine kinase domain PJW04_06440 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PJW04_06440 IPR001610 PAC motif PJW04_06440 IPR000014 PAS domain PJW04_06440 IPR000700 PAS-associated, C-terminal PJW04_06440 IPR035965 PAS domain superfamily PJW04_06440 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW04_06440 IPR001789 Signal transduction response regulator, receiver domain PJW04_06440 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_06440 IPR011006 CheY-like superfamily PJW04_06440 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_06440 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PJW04_06445 IPR011006 CheY-like superfamily PJW04_06445 IPR001789 Signal transduction response regulator, receiver domain PJW04_06450 IPR010720 Alpha-L-arabinofuranosidase, C-terminal PJW04_06450 IPR017853 Glycoside hydrolase superfamily PJW04_06450 IPR013780 Glycosyl hydrolase, all-beta PJW04_06455 IPR018052 Aldose 1-epimerase, conserved site PJW04_06455 IPR015443 Aldose 1-epimerase PJW04_06455 IPR014718 Glycoside hydrolase-type carbohydrate-binding PJW04_06455 IPR011013 Galactose mutarotase-like domain superfamily PJW04_06455 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase PJW04_06460 IPR017562 Cytochrome c-type biogenesis protein CcsA PJW04_06460 IPR002541 Cytochrome c assembly protein PJW04_06465 IPR022941 Signal recognition particle, SRP54 subunit PJW04_06465 IPR004780 Signal recognition particle protein PJW04_06465 IPR004125 Signal recognition particle, SRP54 subunit, M-domain PJW04_06465 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily PJW04_06465 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily PJW04_06465 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_06465 IPR003593 AAA+ ATPase domain PJW04_06465 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain PJW04_06465 IPR013822 Signal recognition particle SRP54, helical bundle PJW04_06470 IPR013785 Aldolase-type TIM barrel PJW04_06470 IPR004136 Nitronate monooxygenase PJW04_06475 IPR001544 Aminotransferase class IV PJW04_06475 IPR018300 Aminotransferase, class IV, conserved site PJW04_06475 IPR036038 Aminotransferase-like, PLP-dependent enzymes PJW04_06475 IPR005785 Branched-chain amino acid aminotransferase I PJW04_06475 IPR033939 Branched-chain aminotransferase PJW04_06480 IPR000307 Ribosomal protein S16 PJW04_06480 IPR020592 Ribosomal protein S16, conserved site PJW04_06480 IPR023803 Ribosomal protein S16 domain superfamily PJW04_06485 IPR011961 16S rRNA processing protein RimM PJW04_06485 IPR027275 PRC-barrel domain PJW04_06485 IPR011033 PRC-barrel-like superfamily PJW04_06485 IPR002676 RimM, N-terminal PJW04_06485 IPR036976 RimM, N-terminal domain superfamily PJW04_06485 IPR009000 Translation protein, beta-barrel domain superfamily PJW04_06490 IPR029028 Alpha/beta knot methyltransferases PJW04_06490 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain PJW04_06490 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PJW04_06490 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal PJW04_06490 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria PJW04_06495 IPR038657 Ribosomal protein L19 superfamily PJW04_06495 IPR008991 Translation protein SH3-like domain superfamily PJW04_06495 IPR018257 Ribosomal protein L19, conserved site PJW04_06495 IPR001857 Ribosomal protein L19 PJW04_06500 IPR002528 Multi antimicrobial extrusion protein PJW04_06515 IPR036986 RNA-binding S4 domain superfamily PJW04_06515 IPR002942 RNA-binding S4 domain PJW04_06515 IPR025708 Heat shock protein 15 PJW04_06520 IPR019793 Peroxidases heam-ligand binding site PJW04_06520 IPR019794 Peroxidase, active site PJW04_06520 IPR010255 Haem peroxidase superfamily PJW04_06520 IPR002016 Haem peroxidase PJW04_06520 IPR000763 Catalase-peroxidase haem PJW04_06530 IPR036678 MutS, connector domain superfamily PJW04_06530 IPR007861 DNA mismatch repair protein MutS, clamp PJW04_06530 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_06530 IPR005748 DNA mismatch repair protein MutS PJW04_06530 IPR007860 DNA mismatch repair protein MutS, connector domain PJW04_06530 IPR007695 DNA mismatch repair protein MutS-like, N-terminal PJW04_06530 IPR017261 DNA mismatch repair protein MutS/MSH PJW04_06530 IPR000432 DNA mismatch repair protein MutS, C-terminal PJW04_06530 IPR036187 DNA mismatch repair protein MutS, core domain superfamily PJW04_06530 IPR016151 DNA mismatch repair protein MutS, N-terminal PJW04_06530 IPR007696 DNA mismatch repair protein MutS, core PJW04_06540 IPR004981 Tryptophan 2,3-dioxygenase PJW04_06540 IPR037217 Tryptophan/Indoleamine 2,3-dioxygenase-like PJW04_06550 IPR015424 Pyridoxal phosphate-dependent transferase PJW04_06550 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site PJW04_06550 IPR000192 Aminotransferase class V domain PJW04_06550 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PJW04_06550 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PJW04_06555 IPR036291 NAD(P)-binding domain superfamily PJW04_06555 IPR002347 Short-chain dehydrogenase/reductase SDR PJW04_06560 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PJW04_06560 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PJW04_06560 IPR015424 Pyridoxal phosphate-dependent transferase PJW04_06560 IPR004839 Aminotransferase, class I/classII PJW04_06565 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PJW04_06565 IPR003660 HAMP domain PJW04_06565 IPR004090 Chemotaxis methyl-accepting receptor PJW04_06580 IPR032311 Domain of unknown function DUF4982 PJW04_06580 IPR013783 Immunoglobulin-like fold PJW04_06580 IPR008964 Invasin/intimin cell-adhesion fragments PJW04_06580 IPR017853 Glycoside hydrolase superfamily PJW04_06580 IPR006104 Glycosyl hydrolases family 2, sugar binding domain PJW04_06580 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich PJW04_06580 IPR023232 Glycoside hydrolase, family 2, active site PJW04_06580 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily PJW04_06580 IPR008979 Galactose-binding-like domain superfamily PJW04_06580 IPR040605 Glycoside hydrolase family 2, domain 5 PJW04_06580 IPR006101 Glycoside hydrolase, family 2 PJW04_06580 IPR006103 Glycoside hydrolase family 2, catalytic domain PJW04_06585 IPR011683 Glycosyl hydrolase family 53 PJW04_06585 IPR017853 Glycoside hydrolase superfamily PJW04_06595 IPR010982 Lambda repressor-like, DNA-binding domain superfamily PJW04_06595 IPR001387 Cro/C1-type helix-turn-helix domain PJW04_06595 IPR018653 Domain of unknown function DUF2083,transcriptional regulator PJW04_06595 IPR026281 HTH-type transcriptional regulator RamB PJW04_06595 IPR010359 IrrE N-terminal-like domain PJW04_06600 IPR016163 Aldehyde dehydrogenase, C-terminal PJW04_06600 IPR016161 Aldehyde/histidinol dehydrogenase PJW04_06600 IPR016160 Aldehyde dehydrogenase, cysteine active site PJW04_06600 IPR016162 Aldehyde dehydrogenase, N-terminal PJW04_06600 IPR015590 Aldehyde dehydrogenase domain PJW04_06600 IPR010061 Methylmalonate-semialdehyde dehydrogenase PJW04_06605 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal PJW04_06605 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily PJW04_06605 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily PJW04_06605 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal PJW04_06605 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal PJW04_06605 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain PJW04_06605 IPR006089 Acyl-CoA dehydrogenase, conserved site PJW04_06610 IPR014748 Enoyl-CoA hydratase, C-terminal PJW04_06610 IPR001753 Enoyl-CoA hydratase/isomerase PJW04_06610 IPR029045 ClpP/crotonase-like domain superfamily PJW04_06610 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site PJW04_06615 IPR036291 NAD(P)-binding domain superfamily PJW04_06615 IPR029045 ClpP/crotonase-like domain superfamily PJW04_06615 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily PJW04_06615 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site PJW04_06615 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding PJW04_06615 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site PJW04_06615 IPR012802 Fatty oxidation complex, alpha subunit FadJ PJW04_06615 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal PJW04_06615 IPR001753 Enoyl-CoA hydratase/isomerase PJW04_06620 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily PJW04_06620 IPR013328 6-phosphogluconate dehydrogenase, domain 2 PJW04_06620 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding PJW04_06620 IPR011548 3-hydroxyisobutyrate dehydrogenase PJW04_06620 IPR015815 3-hydroxyisobutyrate dehydrogenase-related PJW04_06620 IPR036291 NAD(P)-binding domain superfamily PJW04_06620 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site PJW04_06620 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain PJW04_06625 IPR002524 Cation efflux protein PJW04_06625 IPR036837 Cation efflux protein, cytoplasmic domain superfamily PJW04_06625 IPR027469 Cation efflux transmembrane domain superfamily PJW04_06630 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily PJW04_06630 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site PJW04_06630 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding PJW04_06630 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal PJW04_06630 IPR012802 Fatty oxidation complex, alpha subunit FadJ PJW04_06630 IPR029045 ClpP/crotonase-like domain superfamily PJW04_06630 IPR001753 Enoyl-CoA hydratase/isomerase PJW04_06630 IPR036291 NAD(P)-binding domain superfamily PJW04_06635 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_06635 IPR013324 RNA polymerase sigma factor, region 3/4-like PJW04_06635 IPR013325 RNA polymerase sigma factor, region 2 PJW04_06635 IPR014286 RNA polymerase sigma-70 RpoE type PJW04_06635 IPR039425 RNA polymerase sigma-70 like PJW04_06635 IPR014284 RNA polymerase sigma-70 like domain PJW04_06635 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site PJW04_06635 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 PJW04_06635 IPR007627 RNA polymerase sigma-70 region 2 PJW04_06645 IPR001478 PDZ domain PJW04_06645 IPR036034 PDZ superfamily PJW04_06645 IPR011782 Peptidase S1C, Do PJW04_06645 IPR009003 Peptidase S1, PA clan PJW04_06645 IPR001940 Peptidase S1C PJW04_06650 IPR000795 Transcription factor, GTP-binding domain PJW04_06650 IPR005225 Small GTP-binding protein domain PJW04_06650 IPR006297 Elongation factor 4 PJW04_06650 IPR035647 EF-G domain III/V-like PJW04_06650 IPR000640 Elongation factor EFG, domain V-like PJW04_06650 IPR004161 Translation elongation factor EFTu-like, domain 2 PJW04_06650 IPR031157 Tr-type G domain, conserved site PJW04_06650 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_06650 IPR035654 Elongation factor 4, domain IV PJW04_06650 IPR013842 GTP-binding protein LepA, C-terminal PJW04_06650 IPR038363 LepA, C-terminal domain superfamily PJW04_06655 IPR019757 Peptidase S26A, signal peptidase I, lysine active site PJW04_06655 IPR019533 Peptidase S26 PJW04_06655 IPR019758 Peptidase S26A, signal peptidase I, conserved site PJW04_06655 IPR000223 Peptidase S26A, signal peptidase I PJW04_06655 IPR036286 LexA/Signal peptidase-like superfamily PJW04_06655 IPR019756 Peptidase S26A, signal peptidase I, serine active site PJW04_06665 IPR014720 Double-stranded RNA-binding domain PJW04_06665 IPR000999 Ribonuclease III domain PJW04_06665 IPR036389 Ribonuclease III, endonuclease domain superfamily PJW04_06665 IPR011907 Ribonuclease III PJW04_06670 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_06670 IPR009019 K homology domain superfamily, prokaryotic type PJW04_06670 IPR004044 K Homology domain, type 2 PJW04_06670 IPR015946 K homology domain-like, alpha/beta PJW04_06670 IPR006073 GTP binding domain PJW04_06670 IPR005662 GTP-binding protein Era PJW04_06670 IPR030388 Era-type guanine nucleotide-binding (G) domain PJW04_06670 IPR005225 Small GTP-binding protein domain PJW04_06675 IPR003717 Recombination protein O, RecO PJW04_06675 IPR012340 Nucleic acid-binding, OB-fold PJW04_06675 IPR022572 DNA replication/recombination mediator RecO, N-terminal PJW04_06675 IPR037278 ARFGAP/RecO-like zinc finger PJW04_06685 IPR002792 TRAM domain PJW04_06685 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW04_06685 IPR010280 (Uracil-5)-methyltransferase family PJW04_06685 IPR030391 RNA methyltransferase TrmA, conserved site PJW04_06685 IPR012340 Nucleic acid-binding, OB-fold PJW04_06685 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD PJW04_06685 IPR030390 RNA methyltransferase TrmA, active site PJW04_06690 IPR023577 CYTH domain PJW04_06690 IPR012042 Inorganic triphosphatase NeuTTM/CthTTM-like PJW04_06690 IPR033469 CYTH-like domain superfamily PJW04_06695 IPR001853 DSBA-like thioredoxin domain PJW04_06695 IPR036249 Thioredoxin-like superfamily PJW04_06700 IPR002937 Amine oxidase PJW04_06700 IPR014105 Carotenoid/retinoid oxidoreductase PJW04_06700 IPR036188 FAD/NAD(P)-binding domain superfamily PJW04_06705 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily PJW04_06705 IPR007357 Deoxyribodipyrimidine photolyase-related protein PJW04_06705 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PJW04_06710 IPR017853 Glycoside hydrolase superfamily PJW04_06710 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily PJW04_06710 IPR022956 Beta-hexosaminidase, bacterial PJW04_06710 IPR019800 Glycoside hydrolase, family 3, active site PJW04_06710 IPR001764 Glycoside hydrolase, family 3, N-terminal PJW04_06715 IPR005904 Hypoxanthine phosphoribosyl transferase PJW04_06715 IPR000836 Phosphoribosyltransferase domain PJW04_06715 IPR029057 Phosphoribosyltransferase-like PJW04_06720 IPR010044 Methylthioadenosine phosphorylase (MTAP) PJW04_06720 IPR000845 Nucleoside phosphorylase domain PJW04_06720 IPR035994 Nucleoside phosphorylase superfamily PJW04_06720 IPR018099 Purine phosphorylase, family 2, conserved site PJW04_06725 IPR012156 Cold shock, CspA PJW04_06725 IPR011129 Cold shock domain PJW04_06725 IPR002059 Cold-shock protein, DNA-binding PJW04_06725 IPR012340 Nucleic acid-binding, OB-fold PJW04_06725 IPR019844 Cold-shock (CSD) domain PJW04_06730 IPR002938 FAD-binding domain PJW04_06730 IPR036188 FAD/NAD(P)-binding domain superfamily PJW04_06730 IPR027545 Kynurenine 3-monooxygenase PJW04_06740 IPR001650 Helicase, C-terminal PJW04_06740 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_06740 IPR014001 Helicase superfamily 1/2, ATP-binding domain PJW04_06740 IPR013701 DEAD/H associated PJW04_06740 IPR011545 DEAD/DEAH box helicase domain PJW04_06740 IPR003593 AAA+ ATPase domain PJW04_06745 IPR022865 DNA ligase, ATP-dependent, bacterial/archaeal PJW04_06745 IPR000977 DNA ligase, ATP-dependent PJW04_06745 IPR012309 DNA ligase, ATP-dependent, C-terminal PJW04_06745 IPR012310 DNA ligase, ATP-dependent, central PJW04_06745 IPR016059 DNA ligase, ATP-dependent, conserved site PJW04_06745 IPR012308 DNA ligase, ATP-dependent, N-terminal PJW04_06745 IPR036599 DNA ligase, ATP-dependent, N-terminal domain superfamily PJW04_06745 IPR012340 Nucleic acid-binding, OB-fold PJW04_06755 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PJW04_06755 IPR036599 DNA ligase, ATP-dependent, N-terminal domain superfamily PJW04_06755 IPR012308 DNA ligase, ATP-dependent, N-terminal PJW04_06755 IPR012340 Nucleic acid-binding, OB-fold PJW04_06755 IPR012310 DNA ligase, ATP-dependent, central PJW04_06755 IPR000977 DNA ligase, ATP-dependent PJW04_06755 IPR012309 DNA ligase, ATP-dependent, C-terminal PJW04_06755 IPR016059 DNA ligase, ATP-dependent, conserved site PJW04_06775 IPR011006 CheY-like superfamily PJW04_06775 IPR000160 GGDEF domain PJW04_06775 IPR029787 Nucleotide cyclase PJW04_06775 IPR001789 Signal transduction response regulator, receiver domain PJW04_06790 IPR020616 Thiolase, N-terminal PJW04_06790 IPR020613 Thiolase, conserved site PJW04_06790 IPR020617 Thiolase, C-terminal PJW04_06790 IPR020615 Thiolase, acyl-enzyme intermediate active site PJW04_06790 IPR016039 Thiolase-like PJW04_06790 IPR002155 Thiolase PJW04_06790 IPR020610 Thiolase, active site PJW04_06795 IPR022398 Peptidase S8, subtilisin, His-active site PJW04_06795 IPR034061 Autotransporter serine protease peptidase domain PJW04_06795 IPR023828 Peptidase S8, subtilisin, Ser-active site PJW04_06795 IPR036852 Peptidase S8/S53 domain superfamily PJW04_06795 IPR015500 Peptidase S8, subtilisin-related PJW04_06795 IPR011050 Pectin lyase fold/virulence factor PJW04_06795 IPR005546 Autotransporter beta-domain PJW04_06795 IPR036709 Autotransporter beta-domain superfamily PJW04_06795 IPR000209 Peptidase S8/S53 domain PJW04_06795 IPR013425 Autotransporter-associated beta strand repeat PJW04_06795 IPR006315 Outer membrane autotransporter barrel PJW04_06800 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal PJW04_06800 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain PJW04_06800 IPR036291 NAD(P)-binding domain superfamily PJW04_06800 IPR033524 Leu/Phe/Val dehydrogenases active site PJW04_06800 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase PJW04_06800 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal PJW04_06815 IPR002725 Protein of unknown function DUF45 PJW04_06820 IPR009760 Protein of unknown function DUF1328 PJW04_06830 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria PJW04_06830 IPR000962 Zinc finger, DksA/TraR C4-type PJW04_06830 IPR020458 Zinc finger, DksA/TraR C4-type conserved site PJW04_06845 IPR004753 Cell shape determining protein MreB PJW04_06850 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain PJW04_06865 IPR013785 Aldolase-type TIM barrel PJW04_06865 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal PJW04_06870 IPR036259 MFS transporter superfamily PJW04_06870 IPR011701 Major facilitator superfamily PJW04_06870 IPR020846 Major facilitator superfamily domain PJW04_06905 IPR016181 Acyl-CoA N-acyltransferase PJW04_06905 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD PJW04_06905 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal PJW04_06915 IPR019897 RidA, conserved site PJW04_06915 IPR035959 RutC-like superfamily PJW04_06915 IPR006175 YjgF/YER057c/UK114 family PJW04_06915 IPR035709 RutC family, YoaB-like PJW04_06920 IPR003333 Mycolic acid cyclopropane synthase PJW04_06920 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW04_06935 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW04_06935 IPR003333 Mycolic acid cyclopropane synthase PJW04_06960 IPR014284 RNA polymerase sigma-70 like domain PJW04_06960 IPR007627 RNA polymerase sigma-70 region 2 PJW04_06960 IPR007630 RNA polymerase sigma-70 region 4 PJW04_06960 IPR013325 RNA polymerase sigma factor, region 2 PJW04_06960 IPR013324 RNA polymerase sigma factor, region 3/4-like PJW04_06960 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_06960 IPR039425 RNA polymerase sigma-70 like PJW04_06975 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB PJW04_06975 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria PJW04_06975 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PJW04_06975 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PJW04_06975 IPR007202 4Fe-4S domain PJW04_06985 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding PJW04_06985 IPR002547 tRNA-binding domain PJW04_06985 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PJW04_06985 IPR029038 Methionyl-tRNA synthetase, Zn-domain PJW04_06985 IPR033911 Methioninyl-tRNA synthetase core domain PJW04_06985 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site PJW04_06985 IPR014758 Methionyl-tRNA synthetase PJW04_06985 IPR023458 Methionine-tRNA ligase, type 1 PJW04_06985 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal PJW04_06985 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain PJW04_06985 IPR015413 Methionyl/Leucyl tRNA synthetase PJW04_06985 IPR012340 Nucleic acid-binding, OB-fold PJW04_07005 IPR037478 YwkD-like domain PJW04_07005 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PJW04_07005 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PJW04_07005 IPR037523 Vicinal oxygen chelate (VOC) domain PJW04_07020 IPR004840 Amino acid permease, conserved site PJW04_07020 IPR004841 Amino acid permease/ SLC12A domain PJW04_07025 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT PJW04_07025 IPR003726 Homocysteine-binding domain PJW04_07025 IPR036589 Homocysteine-binding domain superfamily PJW04_07035 IPR003744 Queuosine precursor transporter PJW04_07055 IPR011991 ArsR-like helix-turn-helix domain PJW04_07055 IPR005149 Transcription regulator PadR, N-terminal PJW04_07055 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_07055 IPR036390 Winged helix DNA-binding domain superfamily PJW04_07075 IPR005265 Protoporphyrinogen oxidase HemJ-like PJW04_07090 IPR029045 ClpP/crotonase-like domain superfamily PJW04_07090 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal PJW04_07090 IPR001095 Acetyl-CoA carboxylase, alpha subunit PJW04_07095 IPR004013 PHP domain PJW04_07095 IPR016195 Polymerase/histidinol phosphatase-like PJW04_07095 IPR003141 Polymerase/histidinol phosphatase, N-terminal PJW04_07095 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type PJW04_07095 IPR004805 DNA polymerase III, alpha subunit PJW04_07095 IPR029460 DNA polymerase, helix-hairpin-helix motif PJW04_07095 IPR040982 DNA polymerase III alpha subunit finger domain PJW04_07095 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain PJW04_07095 IPR012340 Nucleic acid-binding, OB-fold PJW04_07095 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain PJW04_07100 IPR036397 Ribonuclease H superfamily PJW04_07100 IPR012337 Ribonuclease H-like superfamily PJW04_07100 IPR022898 Ribonuclease HII PJW04_07100 IPR001352 Ribonuclease HII/HIII PJW04_07100 IPR024567 Ribonuclease HII/HIII domain PJW04_07105 IPR003835 Glycosyl transferase, family 19 PJW04_07110 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal PJW04_07110 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily PJW04_07110 IPR001451 Hexapeptide repeat PJW04_07110 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase PJW04_07110 IPR011004 Trimeric LpxA-like superfamily PJW04_07115 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ PJW04_07115 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ PJW04_07115 IPR029069 HotDog domain superfamily PJW04_07120 IPR001451 Hexapeptide repeat PJW04_07120 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD PJW04_07120 IPR011004 Trimeric LpxA-like superfamily PJW04_07120 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region PJW04_07130 IPR023707 Outer membrane protein assembly factor BamA PJW04_07130 IPR034746 POTRA domain PJW04_07130 IPR010827 POTRA domain, BamA/TamA-like PJW04_07130 IPR039910 Surface antigen D15-like PJW04_07130 IPR000184 Bacterial surface antigen (D15) PJW04_07135 IPR041489 PDZ domain 6 PJW04_07135 IPR036034 PDZ superfamily PJW04_07135 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase PJW04_07135 IPR008915 Peptidase M50 PJW04_07135 IPR001478 PDZ domain PJW04_07140 IPR036291 NAD(P)-binding domain superfamily PJW04_07140 IPR026877 DXP reductoisomerase C-terminal domain PJW04_07140 IPR036169 DXP reductoisomerase, C-terminal domain superfamily PJW04_07140 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal PJW04_07140 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase PJW04_07140 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal PJW04_07145 IPR000374 Phosphatidate cytidylyltransferase PJW04_07150 IPR001441 Decaprenyl diphosphate synthase-like PJW04_07150 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site PJW04_07150 IPR036424 Decaprenyl diphosphate synthase-like superfamily PJW04_07155 IPR023584 Ribosome recycling factor domain PJW04_07155 IPR036191 RRF superfamily PJW04_07155 IPR002661 Ribosome recycling factor PJW04_07160 IPR015963 Uridylate kinase, bacteria PJW04_07160 IPR011817 Uridylate kinase PJW04_07160 IPR001048 Aspartate/glutamate/uridylate kinase PJW04_07160 IPR036393 Acetylglutamate kinase-like superfamily PJW04_07165 IPR011006 CheY-like superfamily PJW04_07165 IPR000160 GGDEF domain PJW04_07165 IPR029787 Nucleotide cyclase PJW04_07165 IPR001789 Signal transduction response regulator, receiver domain PJW04_07170 IPR001816 Translation elongation factor EFTs/EF1B PJW04_07170 IPR009060 UBA-like superfamily PJW04_07170 IPR018101 Translation elongation factor Ts, conserved site PJW04_07170 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation PJW04_07170 IPR036402 Elongation factor Ts, dimerisation domain superfamily PJW04_07175 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily PJW04_07175 IPR001865 Ribosomal protein S2 PJW04_07175 IPR018130 Ribosomal protein S2, conserved site PJW04_07175 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid PJW04_07210 IPR000994 Peptidase M24 PJW04_07210 IPR001714 Peptidase M24, methionine aminopeptidase PJW04_07210 IPR036005 Creatinase/aminopeptidase-like PJW04_07210 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 PJW04_07215 IPR002934 Polymerase, nucleotidyl transferase domain PJW04_07215 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase PJW04_07215 IPR006674 HD domain PJW04_07215 IPR003607 HD/PDEase domain PJW04_07215 IPR002912 ACT domain PJW04_07215 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme PJW04_07220 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family PJW04_07220 IPR001451 Hexapeptide repeat PJW04_07220 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 PJW04_07220 IPR011004 Trimeric LpxA-like superfamily PJW04_07220 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily PJW04_07225 IPR006660 Arsenate reductase-like PJW04_07225 IPR036249 Thioredoxin-like superfamily PJW04_07225 IPR006504 Transcriptional regulator Spx/MgsR PJW04_07230 IPR011650 Peptidase M20, dimerisation domain PJW04_07230 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria PJW04_07230 IPR036264 Bacterial exopeptidase dimerisation domain PJW04_07230 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site PJW04_07230 IPR002933 Peptidase M20 PJW04_07235 IPR006426 Asparagine synthase, glutamine-hydrolyzing PJW04_07235 IPR001962 Asparagine synthase PJW04_07235 IPR033738 Asparagine synthase, N-terminal domain PJW04_07235 IPR017932 Glutamine amidotransferase type 2 domain PJW04_07235 IPR029055 Nucleophile aminohydrolases, N-terminal PJW04_07235 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PJW04_07245 IPR000531 TonB-dependent receptor-like, beta-barrel PJW04_07245 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PJW04_07245 IPR039423 TonB-dependent receptor-like PJW04_07245 IPR010105 TonB-dependent siderophore receptor PJW04_07245 IPR012910 TonB-dependent receptor, plug domain PJW04_07245 IPR030148 Catecholate siderophore receptor Fiu PJW04_07245 IPR037066 TonB-dependent receptor, plug domain superfamily PJW04_07250 IPR023343 Penicillin amidase type, domain 1 PJW04_07250 IPR014395 Penicillin/GL-7-ACA/AHL acylase PJW04_07250 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase PJW04_07250 IPR029055 Nucleophile aminohydrolases, N-terminal PJW04_07255 IPR008331 Ferritin/DPS protein domain PJW04_07255 IPR009078 Ferritin-like superfamily PJW04_07255 IPR009040 Ferritin-like diiron domain PJW04_07255 IPR012347 Ferritin-like PJW04_07255 IPR002024 Bacterioferritin PJW04_07260 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW04_07260 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification PJW04_07260 IPR025835 Thiopurine S-methyltransferase PJW04_07260 IPR008854 TPMT family PJW04_07265 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily PJW04_07265 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta PJW04_07265 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative PJW04_07265 IPR013760 DNA topoisomerase, type IIA-like domain superfamily PJW04_07265 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal PJW04_07265 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat PJW04_07265 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal PJW04_07280 IPR003423 Outer membrane efflux protein PJW04_07280 IPR010131 RND efflux system, outer membrane lipoprotein, NodT PJW04_07285 IPR005694 Efflux pump membrane protein PJW04_07285 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PJW04_07290 IPR036259 MFS transporter superfamily PJW04_07290 IPR011701 Major facilitator superfamily PJW04_07290 IPR004638 Drug resistance transporter EmrB-like PJW04_07290 IPR020846 Major facilitator superfamily domain PJW04_07315 IPR017853 Glycoside hydrolase superfamily PJW04_07315 IPR011658 PA14 domain PJW04_07315 IPR037524 PA14/GLEYA domain PJW04_07315 IPR013783 Immunoglobulin-like fold PJW04_07315 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily PJW04_07315 IPR008979 Galactose-binding-like domain superfamily PJW04_07315 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily PJW04_07315 IPR002772 Glycoside hydrolase family 3 C-terminal domain PJW04_07315 IPR019800 Glycoside hydrolase, family 3, active site PJW04_07315 IPR026891 Fibronectin type III-like domain PJW04_07315 IPR001764 Glycoside hydrolase, family 3, N-terminal PJW04_07325 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site PJW04_07325 IPR000109 Proton-dependent oligopeptide transporter family PJW04_07325 IPR020846 Major facilitator superfamily domain PJW04_07325 IPR005279 Dipeptide/tripeptide permease PJW04_07325 IPR036259 MFS transporter superfamily PJW04_07350 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_07350 IPR036390 Winged helix DNA-binding domain superfamily PJW04_07350 IPR000835 MarR-type HTH domain PJW04_07350 IPR023187 Transcriptional regulator MarR-type, conserved site PJW04_07355 IPR001567 Peptidase M3A/M3B catalytic domain PJW04_07355 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 PJW04_07360 IPR036249 Thioredoxin-like superfamily PJW04_07360 IPR029759 Glutathione peroxidase active site PJW04_07360 IPR029760 Glutathione peroxidase conserved site PJW04_07360 IPR000889 Glutathione peroxidase PJW04_07365 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain PJW04_07365 IPR017927 FAD-binding domain, ferredoxin reductase-type PJW04_07365 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase PJW04_07365 IPR033892 Ferredoxin--NADP reductase, bacteria PJW04_07365 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PJW04_07365 IPR001433 Oxidoreductase FAD/NAD(P)-binding PJW04_07365 IPR017938 Riboflavin synthase-like beta-barrel PJW04_07370 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_07370 IPR003439 ABC transporter-like PJW04_07370 IPR036640 ABC transporter type 1, transmembrane domain superfamily PJW04_07370 IPR039421 Type I protein exporter PJW04_07370 IPR003593 AAA+ ATPase domain PJW04_07370 IPR011527 ABC transporter type 1, transmembrane domain PJW04_07370 IPR017871 ABC transporter, conserved site PJW04_07375 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain PJW04_07375 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain PJW04_07375 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily PJW04_07375 IPR011167 Iron-dependent fumarate hydratase PJW04_07375 IPR020557 Fumarate lyase, conserved site PJW04_07390 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site PJW04_07390 IPR001765 Carbonic anhydrase PJW04_07390 IPR036874 Carbonic anhydrase superfamily PJW04_07395 IPR036541 Phospholipase A1 superfamily PJW04_07395 IPR003187 Phospholipase A1 PJW04_07405 IPR012156 Cold shock, CspA PJW04_07405 IPR011129 Cold shock domain PJW04_07405 IPR019844 Cold-shock (CSD) domain PJW04_07405 IPR002059 Cold-shock protein, DNA-binding PJW04_07405 IPR012340 Nucleic acid-binding, OB-fold PJW04_07420 IPR035985 Ubiquitin-activating enzyme PJW04_07420 IPR000594 THIF-type NAD/FAD binding fold PJW04_07425 IPR015991 Uncharacterised hydrolase TatD-type PJW04_07425 IPR001130 TatD family PJW04_07425 IPR032466 Metal-dependent hydrolase PJW04_07425 IPR018228 Deoxyribonuclease, TatD-related, conserved site PJW04_07440 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal PJW04_07440 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily PJW04_07440 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily PJW04_07440 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal PJW04_07440 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal PJW04_07440 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain PJW04_07440 IPR006089 Acyl-CoA dehydrogenase, conserved site PJW04_07450 IPR004046 Glutathione S-transferase, C-terminal PJW04_07450 IPR004045 Glutathione S-transferase, N-terminal PJW04_07450 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PJW04_07450 IPR010987 Glutathione S-transferase, C-terminal-like PJW04_07450 IPR036249 Thioredoxin-like superfamily PJW04_07455 IPR006426 Asparagine synthase, glutamine-hydrolyzing PJW04_07455 IPR001962 Asparagine synthase PJW04_07455 IPR033738 Asparagine synthase, N-terminal domain PJW04_07455 IPR017932 Glutamine amidotransferase type 2 domain PJW04_07455 IPR029055 Nucleophile aminohydrolases, N-terminal PJW04_07460 IPR029039 Flavoprotein-like superfamily PJW04_07460 IPR005025 NADPH-dependent FMN reductase-like PJW04_07465 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_07465 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal PJW04_07465 IPR007694 DNA helicase, DnaB-like, C-terminal PJW04_07465 IPR007692 DNA helicase, DnaB type PJW04_07465 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily PJW04_07465 IPR003593 AAA+ ATPase domain PJW04_07465 IPR007693 DNA helicase, DnaB-like, N-terminal PJW04_07470 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PJW04_07470 IPR006050 DNA photolyase, N-terminal PJW04_07470 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily PJW04_07470 IPR002081 Cryptochrome/DNA photolyase class 1 PJW04_07470 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain PJW04_07470 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily PJW04_07470 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal PJW04_07475 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel PJW04_07475 IPR006665 OmpA-like domain PJW04_07475 IPR006690 Outer membrane protein, OmpA-like, conserved site PJW04_07475 IPR036737 OmpA-like domain superfamily PJW04_07475 IPR008722 Outer membrane porin F, N-terminal PJW04_07475 IPR028974 TSP type-3 repeat PJW04_07475 IPR006664 Outer membrane protein, bacterial PJW04_07480 IPR005119 LysR, substrate-binding PJW04_07480 IPR000847 Transcription regulator HTH, LysR PJW04_07480 IPR036390 Winged helix DNA-binding domain superfamily PJW04_07480 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_07495 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PJW04_07495 IPR006143 RND efflux pump, membrane fusion protein PJW04_07500 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 PJW04_07500 IPR001036 Acriflavin resistance protein PJW04_07500 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PJW04_07505 IPR036291 NAD(P)-binding domain superfamily PJW04_07505 IPR020904 Short-chain dehydrogenase/reductase, conserved site PJW04_07505 IPR002347 Short-chain dehydrogenase/reductase SDR PJW04_07510 IPR003423 Outer membrane efflux protein PJW04_07510 IPR010131 RND efflux system, outer membrane lipoprotein, NodT PJW04_07515 IPR000160 GGDEF domain PJW04_07515 IPR029787 Nucleotide cyclase PJW04_07525 IPR029787 Nucleotide cyclase PJW04_07525 IPR000160 GGDEF domain PJW04_07560 IPR000209 Peptidase S8/S53 domain PJW04_07560 IPR023827 Peptidase S8, subtilisin, Asp-active site PJW04_07560 IPR022398 Peptidase S8, subtilisin, His-active site PJW04_07560 IPR023828 Peptidase S8, subtilisin, Ser-active site PJW04_07560 IPR015500 Peptidase S8, subtilisin-related PJW04_07560 IPR034202 Subtilisin Carlsberg-like catalytic domain PJW04_07560 IPR036852 Peptidase S8/S53 domain superfamily PJW04_07565 IPR020081 SsrA-binding protein, conserved site PJW04_07565 IPR023620 Small protein B PJW04_07565 IPR000037 SsrA-binding protein PJW04_07570 IPR023393 START-like domain superfamily PJW04_07570 IPR005031 Coenzyme Q-binding protein COQ10, START domain PJW04_07575 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp PJW04_07575 IPR005346 RnfH protein PJW04_07575 IPR037021 RnfH superfamily PJW04_07580 IPR026592 Outer membrane protein assembly factor BamE PJW04_07580 IPR037873 BamE-like PJW04_07580 IPR007450 Lipoprotein SmpA/OmlA PJW04_07585 IPR002481 Ferric-uptake regulator PJW04_07585 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_07585 IPR036390 Winged helix DNA-binding domain superfamily PJW04_07590 IPR003395 RecF/RecN/SMC, N-terminal PJW04_07590 IPR004604 DNA recombination/repair protein RecN PJW04_07590 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_07595 IPR029016 GAF-like domain superfamily PJW04_07595 IPR002571 Heat-inducible transcription repressor HrcA PJW04_07595 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal PJW04_07595 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_07595 IPR036390 Winged helix DNA-binding domain superfamily PJW04_07595 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily PJW04_07595 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain PJW04_07600 IPR009012 GrpE nucleotide exchange factor, head PJW04_07600 IPR000740 GrpE nucleotide exchange factor PJW04_07600 IPR013805 GrpE nucleotide exchange factor, coiled-coil PJW04_07605 IPR012725 Chaperone DnaK PJW04_07605 IPR018181 Heat shock protein 70, conserved site PJW04_07605 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily PJW04_07605 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily PJW04_07605 IPR013126 Heat shock protein 70 family PJW04_07610 IPR036869 Chaperone J-domain superfamily PJW04_07610 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily PJW04_07610 IPR001305 Heat shock protein DnaJ, cysteine-rich domain PJW04_07610 IPR001623 DnaJ domain PJW04_07610 IPR002939 Chaperone DnaJ, C-terminal PJW04_07610 IPR012724 Chaperone DnaJ PJW04_07610 IPR008971 HSP40/DnaJ peptide-binding PJW04_07615 IPR023479 Pyridoxine/pyridoxal/pyridoxamine kinase PJW04_07615 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase PJW04_07615 IPR004625 Pyridoxine kinase PJW04_07615 IPR029056 Ribokinase-like PJW04_07640 IPR005074 Peptidase C39, bacteriocin processing PJW04_07640 IPR039421 Type I protein exporter PJW04_07640 IPR039395 Peptidase C39-like A PJW04_07640 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_07640 IPR003593 AAA+ ATPase domain PJW04_07640 IPR017871 ABC transporter, conserved site PJW04_07640 IPR003439 ABC transporter-like PJW04_07640 IPR036640 ABC transporter type 1, transmembrane domain superfamily PJW04_07640 IPR011527 ABC transporter type 1, transmembrane domain PJW04_07640 IPR010132 ATPase, type I secretion system, HlyB PJW04_07645 IPR005119 LysR, substrate-binding PJW04_07645 IPR000847 Transcription regulator HTH, LysR PJW04_07645 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_07645 IPR036390 Winged helix DNA-binding domain superfamily PJW04_07650 IPR011917 ABC transporter, lipid A export, MsbA PJW04_07650 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_07650 IPR017871 ABC transporter, conserved site PJW04_07650 IPR039421 Type I protein exporter PJW04_07650 IPR036640 ABC transporter type 1, transmembrane domain superfamily PJW04_07650 IPR011527 ABC transporter type 1, transmembrane domain PJW04_07650 IPR003593 AAA+ ATPase domain PJW04_07650 IPR003439 ABC transporter-like PJW04_07655 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site PJW04_07655 IPR020568 Ribosomal protein S5 domain 2-type fold PJW04_07655 IPR036956 Impact, N-terminal domain superfamily PJW04_07655 IPR001498 Impact, N-terminal PJW04_07655 IPR023582 Impact family PJW04_07655 IPR035647 EF-G domain III/V-like PJW04_07660 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG PJW04_07660 IPR031100 LOG family PJW04_07665 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site PJW04_07665 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PJW04_07665 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I PJW04_07665 IPR006258 Dihydrolipoamide dehydrogenase PJW04_07665 IPR023753 FAD/NAD(P)-binding domain PJW04_07665 IPR036188 FAD/NAD(P)-binding domain superfamily PJW04_07665 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily PJW04_07670 IPR036625 E3-binding domain superfamily PJW04_07670 IPR011053 Single hybrid motif PJW04_07670 IPR006255 Dihydrolipoamide succinyltransferase PJW04_07670 IPR004167 Peripheral subunit-binding domain PJW04_07670 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily PJW04_07670 IPR000089 Biotin/lipoyl attachment PJW04_07670 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain PJW04_07670 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site PJW04_07675 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain PJW04_07675 IPR011603 2-oxoglutarate dehydrogenase E1 component PJW04_07675 IPR001017 Dehydrogenase, E1 component PJW04_07675 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal PJW04_07675 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily PJW04_07675 IPR029061 Thiamin diphosphate-binding fold PJW04_07675 IPR005475 Transketolase-like, pyrimidine-binding domain PJW04_07685 IPR003347 JmjC domain PJW04_07685 IPR039994 JmjC domain-containing PJW04_07695 IPR008948 L-Aspartase-like PJW04_07695 IPR004769 Adenylosuccinate lyase PJW04_07695 IPR022761 Fumarate lyase, N-terminal PJW04_07695 IPR000362 Fumarate lyase family PJW04_07695 IPR013539 Adenylosuccinate lyase PurB, C-terminal PJW04_07695 IPR024083 Fumarase/histidase, N-terminal PJW04_07695 IPR020557 Fumarate lyase, conserved site PJW04_07705 IPR000644 CBS domain PJW04_07705 IPR002550 CNNM, transmembrane domain PJW04_07705 IPR036318 FAD-binding, type PCMH-like superfamily PJW04_07705 IPR016169 FAD-binding, type PCMH, subdomain 2 PJW04_07705 IPR005170 Transporter-associated domain PJW04_07710 IPR005677 Fumarate hydratase, class II PJW04_07710 IPR024083 Fumarase/histidase, N-terminal PJW04_07710 IPR018951 Fumarase C, C-terminal PJW04_07710 IPR020557 Fumarate lyase, conserved site PJW04_07710 IPR008948 L-Aspartase-like PJW04_07710 IPR022761 Fumarate lyase, N-terminal PJW04_07710 IPR000362 Fumarate lyase family PJW04_07735 IPR003439 ABC transporter-like PJW04_07735 IPR003593 AAA+ ATPase domain PJW04_07735 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_07740 IPR000524 Transcription regulator HTH, GntR PJW04_07740 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_07740 IPR036390 Winged helix DNA-binding domain superfamily PJW04_07750 IPR029760 Glutathione peroxidase conserved site PJW04_07750 IPR000889 Glutathione peroxidase PJW04_07750 IPR029759 Glutathione peroxidase active site PJW04_07750 IPR036249 Thioredoxin-like superfamily PJW04_07760 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily PJW04_07760 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal PJW04_07760 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain PJW04_07760 IPR008104 Macrophage infectivity potentiator PJW04_07765 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type PJW04_07765 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily PJW04_07765 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation PJW04_07765 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal PJW04_07765 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily PJW04_07765 IPR036291 NAD(P)-binding domain superfamily PJW04_07765 IPR017476 UDP-glucose/GDP-mannose dehydrogenase PJW04_07765 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal PJW04_07770 IPR007236 SlyX PJW04_07785 IPR010982 Lambda repressor-like, DNA-binding domain superfamily PJW04_07785 IPR023588 Transcription regulator HTH, PurR PJW04_07785 IPR000843 LacI-type HTH domain PJW04_07785 IPR028082 Periplasmic binding protein-like I PJW04_07790 IPR036259 MFS transporter superfamily PJW04_07790 IPR011701 Major facilitator superfamily PJW04_07790 IPR005964 Bacterial glucose/galactose transporter PJW04_07795 IPR029056 Ribokinase-like PJW04_07795 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site PJW04_07795 IPR011611 Carbohydrate kinase PfkB PJW04_07795 IPR002139 Ribokinase/fructokinase PJW04_07805 IPR011005 Dihydropteroate synthase-like PJW04_07805 IPR036724 Cobalamin-binding domain superfamily PJW04_07805 IPR036589 Homocysteine-binding domain superfamily PJW04_07805 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain PJW04_07805 IPR003726 Homocysteine-binding domain PJW04_07805 IPR006158 Cobalamin (vitamin B12)-binding domain PJW04_07805 IPR033706 Methionine synthase, B12-binding domain PJW04_07805 IPR036594 Methionine synthase domain PJW04_07805 IPR011822 Cobalamin-dependent methionine synthase PJW04_07805 IPR000489 Pterin-binding domain PJW04_07805 IPR004223 Vitamin B12-dependent methionine synthase, activation domain PJW04_07805 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily PJW04_07810 IPR000489 Pterin-binding domain PJW04_07810 IPR011005 Dihydropteroate synthase-like PJW04_07810 IPR003726 Homocysteine-binding domain PJW04_07810 IPR036589 Homocysteine-binding domain superfamily PJW04_07815 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW04_07815 IPR004033 UbiE/COQ5 methyltransferase PJW04_07815 IPR023576 UbiE/COQ5 methyltransferase, conserved site PJW04_07840 IPR013668 Ribonuclease R winged-helix domain PJW04_07840 IPR011805 Ribonuclease R PJW04_07840 IPR004476 Ribonuclease II/ribonuclease R PJW04_07840 IPR003029 S1 domain PJW04_07840 IPR022967 RNA-binding domain, S1 PJW04_07840 IPR022966 Ribonuclease II/R, conserved site PJW04_07840 IPR012340 Nucleic acid-binding, OB-fold PJW04_07840 IPR013223 Ribonuclease B, N-terminal OB domain PJW04_07840 IPR040476 RNase II/RNase R, cold shock domain PJW04_07840 IPR011129 Cold shock domain PJW04_07840 IPR001900 Ribonuclease II/R PJW04_07850 IPR001537 tRNA/rRNA methyltransferase, SpoU type PJW04_07850 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PJW04_07850 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB PJW04_07850 IPR029028 Alpha/beta knot methyltransferases PJW04_07850 IPR029064 50S ribosomal protein L30e-like PJW04_07850 IPR004441 RNA methyltransferase TrmH family PJW04_07850 IPR013123 RNA 2-O ribose methyltransferase, substrate binding PJW04_07855 IPR029787 Nucleotide cyclase PJW04_07855 IPR000160 GGDEF domain PJW04_07860 IPR013520 Exonuclease, RNase T/DNA polymerase III PJW04_07860 IPR005987 Ribonuclease T PJW04_07860 IPR012337 Ribonuclease H-like superfamily PJW04_07860 IPR036397 Ribonuclease H superfamily PJW04_07870 IPR028366 Phosphate transport system protein PhoU PJW04_07870 IPR038078 PhoU-like domain superfamily PJW04_07870 IPR026022 PhoU domain PJW04_07875 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_07875 IPR005670 Phosphate transport system permease protein 1 PJW04_07875 IPR015850 ABC transporter, phosphate import, PstB PJW04_07875 IPR017871 ABC transporter, conserved site PJW04_07875 IPR003439 ABC transporter-like PJW04_07875 IPR003593 AAA+ ATPase domain PJW04_07880 IPR000515 ABC transporter type 1, transmembrane domain MetI-like PJW04_07880 IPR035906 MetI-like superfamily PJW04_07880 IPR005672 Phosphate transport system permease protein PstA PJW04_07885 IPR000515 ABC transporter type 1, transmembrane domain MetI-like PJW04_07885 IPR035906 MetI-like superfamily PJW04_07885 IPR011864 Phosphate ABC transporter, permease protein PstC PJW04_07890 IPR024370 PBP domain PJW04_07890 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS PJW04_07895 IPR024370 PBP domain PJW04_07895 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS PJW04_07910 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site PJW04_07910 IPR001765 Carbonic anhydrase PJW04_07910 IPR036874 Carbonic anhydrase superfamily PJW04_07915 IPR011547 SLC26A/SulP transporter domain PJW04_07915 IPR001902 SLC26A/SulP transporter PJW04_07915 IPR002645 STAS domain PJW04_07915 IPR036513 STAS domain superfamily PJW04_07920 IPR004035 Endonuclease III, iron-sulphur binding site PJW04_07920 IPR005759 Endonuclease III PJW04_07920 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal PJW04_07920 IPR000445 Helix-hairpin-helix motif PJW04_07920 IPR003265 HhH-GPD domain PJW04_07920 IPR011257 DNA glycosylase PJW04_07920 IPR004036 Endonuclease III-like, conserved site-2 PJW04_07920 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif PJW04_07930 IPR001753 Enoyl-CoA hydratase/isomerase PJW04_07930 IPR029045 ClpP/crotonase-like domain superfamily PJW04_07930 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site PJW04_07930 IPR014748 Enoyl-CoA hydratase, C-terminal PJW04_07935 IPR008104 Macrophage infectivity potentiator PJW04_07935 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain PJW04_07935 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal PJW04_07935 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily PJW04_07940 IPR000059 NUDIX hydrolase, NudL, conserved site PJW04_07940 IPR015797 NUDIX hydrolase-like domain superfamily PJW04_07940 IPR000086 NUDIX hydrolase domain PJW04_07940 IPR023735 Uncharacterised nudix hydrolase NudL PJW04_07945 IPR036873 Rhodanese-like domain superfamily PJW04_07945 IPR001763 Rhodanese-like domain PJW04_07985 IPR004114 THUMP domain PJW04_07985 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW04_07985 IPR000241 Putative RNA methylase domain PJW04_07985 IPR019614 S-adenosylmethionine-dependent methyltransferase PJW04_07985 IPR017244 Ribosomal RNA large subunit methyltransferase K/L PJW04_07985 IPR002052 DNA methylase, N-6 adenine-specific, conserved site PJW04_07990 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal PJW04_07990 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal PJW04_07990 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily PJW04_07990 IPR002504 NAD kinase PJW04_08005 IPR036812 NADP-dependent oxidoreductase domain superfamily PJW04_08005 IPR020471 Aldo/keto reductase PJW04_08005 IPR023210 NADP-dependent oxidoreductase domain PJW04_08015 IPR012337 Ribonuclease H-like superfamily PJW04_08015 IPR013520 Exonuclease, RNase T/DNA polymerase III PJW04_08015 IPR013620 Exodeoxyribonuclease I, C-terminal PJW04_08015 IPR038649 Exonuclease I, SH3-like domain superfamily PJW04_08015 IPR023607 Exodeoxyribonuclease I PJW04_08015 IPR034748 Exonuclease I, C-terminal alpha-helical domain PJW04_08015 IPR036397 Ribonuclease H superfamily PJW04_08015 IPR034747 Exonuclease I, SH3-like domain PJW04_08025 IPR027545 Kynurenine 3-monooxygenase PJW04_08025 IPR036188 FAD/NAD(P)-binding domain superfamily PJW04_08025 IPR002938 FAD-binding domain PJW04_08030 IPR000192 Aminotransferase class V domain PJW04_08030 IPR010111 Kynureninase PJW04_08030 IPR015424 Pyridoxal phosphate-dependent transferase PJW04_08030 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PJW04_08030 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PJW04_08040 IPR011051 RmlC-like cupin domain superfamily PJW04_08040 IPR010329 3-hydroxyanthranilic acid dioxygenase PJW04_08040 IPR014710 RmlC-like jelly roll fold PJW04_08045 IPR001765 Carbonic anhydrase PJW04_08045 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site PJW04_08045 IPR036874 Carbonic anhydrase superfamily PJW04_08090 IPR000792 Transcription regulator LuxR, C-terminal PJW04_08090 IPR011006 CheY-like superfamily PJW04_08090 IPR016032 Signal transduction response regulator, C-terminal effector PJW04_08090 IPR001789 Signal transduction response regulator, receiver domain PJW04_08115 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type PJW04_08115 IPR012340 Nucleic acid-binding, OB-fold PJW04_08115 IPR004522 Asparagine-tRNA ligase PJW04_08115 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb PJW04_08115 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) PJW04_08115 IPR006195 Aminoacyl-tRNA synthetase, class II PJW04_08120 IPR000361 FeS cluster biogenesis PJW04_08120 IPR016092 FeS cluster insertion protein PJW04_08120 IPR017870 FeS cluster insertion, C-terminal, conserved site PJW04_08120 IPR035903 HesB-like domain superfamily PJW04_08125 IPR000529 Ribosomal protein S6 PJW04_08125 IPR020814 Ribosomal protein S6, plastid/chloroplast PJW04_08125 IPR035980 Ribosomal protein S6 superfamily PJW04_08125 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 PJW04_08130 IPR001648 Ribosomal protein S18 PJW04_08130 IPR018275 Ribosomal protein S18, conserved site PJW04_08130 IPR036870 Ribosomal protein S18 superfamily PJW04_08135 IPR036935 Ribosomal protein L9, N-terminal domain superfamily PJW04_08135 IPR036791 Ribosomal protein L9, C-terminal domain superfamily PJW04_08135 IPR020069 Ribosomal protein L9, C-terminal PJW04_08135 IPR020070 Ribosomal protein L9, N-terminal PJW04_08135 IPR009027 Ribosomal protein L9/RNase H1, N-terminal PJW04_08135 IPR000244 Ribosomal protein L9 PJW04_08135 IPR020594 Ribosomal protein L9, bacteria/chloroplast PJW04_08140 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_08140 IPR003395 RecF/RecN/SMC, N-terminal PJW04_08140 IPR024704 Structural maintenance of chromosomes protein PJW04_08140 IPR010935 SMCs flexible hinge PJW04_08140 IPR036277 SMCs flexible hinge superfamily PJW04_08140 IPR011890 Structural maintenance of chromosomes protein, prokaryotic PJW04_08145 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily PJW04_08145 IPR007449 ZipA, C-terminal FtsZ-binding domain PJW04_08145 IPR011919 Cell division protein ZipA PJW04_08155 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site PJW04_08155 IPR004839 Aminotransferase, class I/classII PJW04_08155 IPR005861 Histidinol-phosphate aminotransferase family PJW04_08155 IPR024892 Putative phenylalanine aminotransferase PJW04_08155 IPR015424 Pyridoxal phosphate-dependent transferase PJW04_08155 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PJW04_08155 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PJW04_08160 IPR012340 Nucleic acid-binding, OB-fold PJW04_08160 IPR013839 NAD-dependent DNA ligase, adenylation PJW04_08160 IPR013840 NAD-dependent DNA ligase, N-terminal PJW04_08160 IPR001679 NAD-dependent DNA ligase PJW04_08160 IPR010994 RuvA domain 2-like PJW04_08160 IPR041663 DisA/LigA, helix-hairpin-helix motif PJW04_08160 IPR036420 BRCT domain superfamily PJW04_08160 IPR001357 BRCT domain PJW04_08160 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type PJW04_08160 IPR018239 NAD-dependent DNA ligase, active site PJW04_08160 IPR004150 NAD-dependent DNA ligase, OB-fold PJW04_08165 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) PJW04_08165 IPR006195 Aminoacyl-tRNA synthetase, class II PJW04_08165 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal PJW04_08165 IPR004525 Elongation factor P--(R)-beta-lysine ligase PJW04_08180 IPR011559 Initiation factor 2B alpha/beta/delta PJW04_08180 IPR005251 Methylthioribose-1-phosphate isomerase PJW04_08180 IPR037171 NagB/RpiA transferase-like PJW04_08180 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal PJW04_08180 IPR000649 Initiation factor 2B-related PJW04_08185 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat PJW04_08185 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta PJW04_08185 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily PJW04_08185 IPR005743 DNA gyrase, subunit A PJW04_08185 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal PJW04_08185 IPR013760 DNA topoisomerase, type IIA-like domain superfamily PJW04_08185 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal PJW04_08190 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily PJW04_08190 IPR002372 Pyrrolo-quinoline quinone repeat PJW04_08190 IPR017511 PQQ-dependent membrane bound dehydrogenase PJW04_08190 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PJW04_08200 IPR035401 Urocanase, C-terminal domain PJW04_08200 IPR023636 Urocanase conserved site PJW04_08200 IPR035400 Urocanase, N-terminal domain PJW04_08200 IPR035085 Urocanase, Rossmann-like domain PJW04_08200 IPR036190 Urocanase superfamily PJW04_08200 IPR038364 Urocanase, central domain superfamily PJW04_08200 IPR023637 Urocanase PJW04_08210 IPR022313 Phenylalanine/histidine ammonia-lyases, active site PJW04_08210 IPR001106 Aromatic amino acid lyase PJW04_08210 IPR024083 Fumarase/histidase, N-terminal PJW04_08210 IPR005921 Histidine ammonia-lyase PJW04_08210 IPR008948 L-Aspartase-like PJW04_08215 IPR013108 Amidohydrolase 3 PJW04_08215 IPR005920 Imidazolonepropionase PJW04_08215 IPR011059 Metal-dependent hydrolase, composite domain superfamily PJW04_08215 IPR032466 Metal-dependent hydrolase PJW04_08230 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_08230 IPR000524 Transcription regulator HTH, GntR PJW04_08230 IPR010248 Histidine utilization repressor PJW04_08230 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily PJW04_08230 IPR036390 Winged helix DNA-binding domain superfamily PJW04_08230 IPR011663 UbiC transcription regulator-associated PJW04_08255 IPR013130 Ferric reductase transmembrane component-like domain PJW04_08255 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ PJW04_08260 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily PJW04_08260 IPR000572 Oxidoreductase, molybdopterin-binding domain PJW04_08260 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP PJW04_08265 IPR000192 Aminotransferase class V domain PJW04_08265 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PJW04_08265 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site PJW04_08265 IPR022278 Phosphoserine aminotransferase PJW04_08265 IPR015424 Pyridoxal phosphate-dependent transferase PJW04_08265 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PJW04_08270 IPR002701 Chorismate mutase II, prokaryotic-type PJW04_08270 IPR036263 Chorismate mutase type II superfamily PJW04_08270 IPR036979 Chorismate mutase domain superfamily PJW04_08270 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain PJW04_08270 IPR001086 Prephenate dehydratase PJW04_08270 IPR018528 Prephenate dehydratase, conserved site PJW04_08270 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase PJW04_08270 IPR002912 ACT domain PJW04_08275 IPR001986 Enolpyruvate transferase domain PJW04_08275 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase PJW04_08275 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site PJW04_08275 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta PJW04_08275 IPR036968 Enolpyruvate transferase domain superfamily PJW04_08285 IPR037682 TonB, C-terminal PJW04_08285 IPR006260 TonB/TolA, C-terminal PJW04_08290 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm PJW04_08290 IPR033729 Serine-tRNA ligase catalytic core domain PJW04_08290 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily PJW04_08290 IPR015866 Serine-tRNA synthetase, type1, N-terminal PJW04_08290 IPR002317 Serine-tRNA ligase, type1 PJW04_08290 IPR006195 Aminoacyl-tRNA synthetase, class II PJW04_08290 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) PJW04_08295 IPR003680 Flavodoxin-like fold PJW04_08295 IPR029039 Flavoprotein-like superfamily PJW04_08295 IPR023048 NADH-azoreductase, FMN-dependent PJW04_08300 IPR036390 Winged helix DNA-binding domain superfamily PJW04_08300 IPR005119 LysR, substrate-binding PJW04_08300 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_08300 IPR000847 Transcription regulator HTH, LysR PJW04_08315 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily PJW04_08315 IPR004090 Chemotaxis methyl-accepting receptor PJW04_08315 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site PJW04_08315 IPR003660 HAMP domain PJW04_08315 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PJW04_08315 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding PJW04_08320 IPR002938 FAD-binding domain PJW04_08320 IPR036188 FAD/NAD(P)-binding domain superfamily PJW04_08335 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW04_08335 IPR011006 CheY-like superfamily PJW04_08335 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_08335 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_08335 IPR005467 Histidine kinase domain PJW04_08335 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PJW04_08335 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PJW04_08335 IPR000014 PAS domain PJW04_08335 IPR001789 Signal transduction response regulator, receiver domain PJW04_08335 IPR035965 PAS domain superfamily PJW04_08335 IPR013656 PAS fold-4 PJW04_08340 IPR019247 Histidine kinase BarA, N-terminal PJW04_08340 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PJW04_08340 IPR036641 HPT domain superfamily PJW04_08340 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_08340 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_08340 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PJW04_08340 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW04_08340 IPR005467 Histidine kinase domain PJW04_08340 IPR001789 Signal transduction response regulator, receiver domain PJW04_08340 IPR003660 HAMP domain PJW04_08340 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain PJW04_08340 IPR011006 CheY-like superfamily PJW04_08350 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_08350 IPR010624 KaiC domain PJW04_08350 IPR014774 KaiC-like domain PJW04_08350 IPR030665 Circadian clock protein kinase KaiC PJW04_08350 IPR003593 AAA+ ATPase domain PJW04_08355 IPR001610 PAC motif PJW04_08355 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW04_08355 IPR000700 PAS-associated, C-terminal PJW04_08355 IPR000014 PAS domain PJW04_08355 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PJW04_08355 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PJW04_08355 IPR005467 Histidine kinase domain PJW04_08355 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_08355 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_08355 IPR011006 CheY-like superfamily PJW04_08355 IPR001789 Signal transduction response regulator, receiver domain PJW04_08355 IPR035965 PAS domain superfamily PJW04_08365 IPR005616 CcmH/CycL/Ccl2/NrfF family PJW04_08365 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily PJW04_08370 IPR013766 Thioredoxin domain PJW04_08370 IPR017937 Thioredoxin, conserved site PJW04_08370 IPR036249 Thioredoxin-like superfamily PJW04_08370 IPR013740 Redoxin PJW04_08370 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE PJW04_08375 IPR003567 Cytochrome c-type biogenesis protein PJW04_08375 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal PJW04_08375 IPR003568 Cytochrome c-type biogenesis protein CcmF PJW04_08375 IPR002541 Cytochrome c assembly protein PJW04_08380 IPR004329 CcmE/CycJ protein PJW04_08380 IPR036127 CcmE-like superfamily PJW04_08385 IPR007078 Haem exporter protein D (CcmD) PJW04_08390 IPR003557 Cytochrome c-type biogenesis protein CcmC PJW04_08390 IPR002541 Cytochrome c assembly protein PJW04_08395 IPR023828 Peptidase S8, subtilisin, Ser-active site PJW04_08395 IPR022398 Peptidase S8, subtilisin, His-active site PJW04_08395 IPR023827 Peptidase S8, subtilisin, Asp-active site PJW04_08395 IPR036852 Peptidase S8/S53 domain superfamily PJW04_08395 IPR000209 Peptidase S8/S53 domain PJW04_08395 IPR015500 Peptidase S8, subtilisin-related PJW04_08395 IPR034084 Thermitase-like, domain PJW04_08405 IPR013324 RNA polymerase sigma factor, region 3/4-like PJW04_08405 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_08405 IPR013325 RNA polymerase sigma factor, region 2 PJW04_08405 IPR014286 RNA polymerase sigma-70 RpoE type PJW04_08405 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 PJW04_08405 IPR007627 RNA polymerase sigma-70 region 2 PJW04_08405 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site PJW04_08405 IPR039425 RNA polymerase sigma-70 like PJW04_08405 IPR014284 RNA polymerase sigma-70 like domain PJW04_08415 IPR036909 Cytochrome c-like domain superfamily PJW04_08415 IPR009056 Cytochrome c-like domain PJW04_08415 IPR002327 Cytochrome c, class IA/ IB PJW04_08430 IPR014710 RmlC-like jelly roll fold PJW04_08430 IPR011051 RmlC-like cupin domain superfamily PJW04_08430 IPR008894 WxcM-like, C-terminal PJW04_08450 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase PJW04_08450 IPR015424 Pyridoxal phosphate-dependent transferase PJW04_08450 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PJW04_08450 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PJW04_08455 IPR032896 Lipid III flippase WzxE PJW04_08455 IPR002797 Polysaccharide biosynthesis protein PJW04_08460 IPR029044 Nucleotide-diphospho-sugar transferases PJW04_08460 IPR002495 Glycosyl transferase, family 8 PJW04_08460 IPR001173 Glycosyltransferase 2-like PJW04_08475 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW04_08475 IPR013216 Methyltransferase type 11 PJW04_08485 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW04_08485 IPR004498 Ribosomal protein L11 methyltransferase PJW04_08495 IPR001296 Glycosyl transferase, family 1 PJW04_08495 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain PJW04_08495 IPR017814 Mycothiol biosynthesis protein, MshA PJW04_08515 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_08515 IPR011924 Lipoprotein releasing system, ATP-binding protein PJW04_08515 IPR003439 ABC transporter-like PJW04_08515 IPR003593 AAA+ ATPase domain PJW04_08515 IPR015854 ABC transporter, lipoprotein release, LolD PJW04_08520 IPR017871 ABC transporter, conserved site PJW04_08520 IPR003593 AAA+ ATPase domain PJW04_08520 IPR011527 ABC transporter type 1, transmembrane domain PJW04_08520 IPR036640 ABC transporter type 1, transmembrane domain superfamily PJW04_08520 IPR039421 Type I protein exporter PJW04_08520 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_08520 IPR011917 ABC transporter, lipid A export, MsbA PJW04_08520 IPR003439 ABC transporter-like PJW04_08525 IPR005828 Major facilitator, sugar transporter-like PJW04_08525 IPR036259 MFS transporter superfamily PJW04_08525 IPR020846 Major facilitator superfamily domain PJW04_08530 IPR011251 Luciferase-like domain PJW04_08530 IPR036661 Luciferase-like domain superfamily PJW04_08530 IPR019949 Luciferase family oxidoreductase, group 1 PJW04_08545 IPR016169 FAD-binding, type PCMH, subdomain 2 PJW04_08545 IPR000644 CBS domain PJW04_08545 IPR005170 Transporter-associated domain PJW04_08545 IPR002550 CNNM, transmembrane domain PJW04_08545 IPR036318 FAD-binding, type PCMH-like superfamily PJW04_08555 IPR001204 Phosphate transporter PJW04_08570 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PJW04_08570 IPR013760 DNA topoisomerase, type IIA-like domain superfamily PJW04_08570 IPR020568 Ribosomal protein S5 domain 2-type fold PJW04_08570 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal PJW04_08570 IPR001241 DNA topoisomerase, type IIA PJW04_08570 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_08570 IPR002288 DNA gyrase B subunit, C-terminal PJW04_08570 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative PJW04_08570 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 PJW04_08570 IPR006171 TOPRIM domain PJW04_08570 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_08570 IPR018522 DNA topoisomerase, type IIA, conserved site PJW04_08580 IPR029062 Class I glutamine amidotransferase-like PJW04_08580 IPR004468 CTP synthase PJW04_08580 IPR017456 CTP synthase, N-terminal PJW04_08580 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_08580 IPR033828 CTP synthase GATase domain PJW04_08580 IPR017926 Glutamine amidotransferase PJW04_08585 IPR013785 Aldolase-type TIM barrel PJW04_08585 IPR006269 3-deoxy-8-phosphooctulonate synthase PJW04_08585 IPR006218 DAHP synthetase I/KDSA PJW04_08595 IPR000941 Enolase PJW04_08595 IPR036849 Enolase-like, C-terminal domain superfamily PJW04_08595 IPR029017 Enolase-like, N-terminal PJW04_08595 IPR020810 Enolase, C-terminal TIM barrel domain PJW04_08595 IPR020809 Enolase, conserved site PJW04_08595 IPR020811 Enolase, N-terminal PJW04_08600 IPR023081 Cell division protein FtsB PJW04_08600 IPR007060 Septum formation initiator FtsL/DivIC PJW04_08605 IPR029044 Nucleotide-diphospho-sugar transferases PJW04_08605 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site PJW04_08605 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase PJW04_08605 IPR034683 Cytidylyltransferase IspD/TarI PJW04_08610 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase PJW04_08610 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site PJW04_08610 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily PJW04_08615 IPR011760 Pseudouridine synthase, TruD, insertion domain PJW04_08615 IPR020119 Pseudouridine synthase TruD, conserved site PJW04_08615 IPR042214 Pseudouridine synthase, TruD, catalytic domain PJW04_08615 IPR020103 Pseudouridine synthase, catalytic domain superfamily PJW04_08615 IPR001656 Pseudouridine synthase, TruD PJW04_08620 IPR002625 Smr domain PJW04_08620 IPR022990 Uncharacterised protein family UPF0115 PJW04_08620 IPR036063 Smr domain superfamily PJW04_08625 IPR030048 Survival protein SurE PJW04_08625 IPR036523 SurE-like phosphatase/nucleotidase superfamily PJW04_08625 IPR002828 Survival protein SurE-like phosphatase/nucleotidase PJW04_08630 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase PJW04_08630 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW04_08635 IPR032816 SNARE associated Golgi protein PJW04_08640 IPR011055 Duplicated hybrid motif PJW04_08640 IPR018392 LysM domain PJW04_08640 IPR036779 LysM domain superfamily PJW04_08640 IPR016047 Peptidase M23 PJW04_08645 IPR007523 NDUFAF3/Mth938 domain-containing protein PJW04_08645 IPR036748 MTH938-like superfamily PJW04_08650 IPR001890 RNA-binding, CRM domain PJW04_08650 IPR035920 YhbY-like superfamily PJW04_08650 IPR017924 RNA-binding protein YhbY PJW04_08655 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW04_08655 IPR015507 Ribosomal RNA large subunit methyltransferase E PJW04_08655 IPR002877 Ribosomal RNA methyltransferase FtsJ domain PJW04_08660 IPR037219 Peptidase M41-like PJW04_08660 IPR003960 ATPase, AAA-type, conserved site PJW04_08660 IPR003959 ATPase, AAA-type, core PJW04_08660 IPR041569 AAA ATPase, AAA+ lid domain PJW04_08660 IPR003593 AAA+ ATPase domain PJW04_08660 IPR011546 Peptidase M41, FtsH extracellular PJW04_08660 IPR000642 Peptidase M41 PJW04_08660 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_08660 IPR005936 Peptidase, FtsH PJW04_08665 IPR011005 Dihydropteroate synthase-like PJW04_08665 IPR000489 Pterin-binding domain PJW04_08665 IPR006390 Dihydropteroate synthase PJW04_08670 IPR039657 Dimethylallyltransferase PJW04_08670 IPR018022 IPP transferase PJW04_08670 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_08675 IPR010920 LSM domain superfamily PJW04_08675 IPR005001 RNA-binding protein Hfq PJW04_08680 IPR032305 GTP-binding protein, middle domain PJW04_08680 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_08680 IPR042108 GTPase HflX, N-terminal domain superfamily PJW04_08680 IPR025121 GTPase HflX, N-terminal PJW04_08680 IPR016496 GTPase HflX PJW04_08680 IPR035647 EF-G domain III/V-like PJW04_08680 IPR030394 HflX-type guanine nucleotide-binding (G) domain PJW04_08680 IPR006073 GTP binding domain PJW04_08685 IPR008136 CinA, C-terminal PJW04_08685 IPR036653 CinA-like, C-terminal PJW04_08690 IPR004147 UbiB domain PJW04_08690 IPR010232 Probable protein kinase UbiB PJW04_08690 IPR011009 Protein kinase-like domain superfamily PJW04_08695 IPR039418 LexA-like PJW04_08695 IPR036390 Winged helix DNA-binding domain superfamily PJW04_08695 IPR036286 LexA/Signal peptidase-like superfamily PJW04_08695 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_08695 IPR015927 Peptidase S24/S26A/S26B/S26C PJW04_08695 IPR006197 Peptidase S24, LexA-like PJW04_08695 IPR006200 Transcription regulator LexA PJW04_08695 IPR006199 LexA repressor, DNA-binding domain PJW04_08700 IPR020584 DNA recombination/repair protein RecA, conserved site PJW04_08700 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_08700 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain PJW04_08700 IPR023400 DNA recombination and repair protein RecA, C-terminal PJW04_08700 IPR013765 DNA recombination and repair protein RecA PJW04_08700 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface PJW04_08700 IPR003593 AAA+ ATPase domain PJW04_08710 IPR003783 Regulatory protein RecX PJW04_08710 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_08715 IPR012947 Threonyl/alanyl tRNA synthetase, SAD PJW04_08715 IPR003156 DHHA1 domain PJW04_08715 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria PJW04_08715 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal PJW04_08715 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain PJW04_08715 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily PJW04_08715 IPR002318 Alanine-tRNA ligase, class IIc PJW04_08715 IPR009000 Translation protein, beta-barrel domain superfamily PJW04_08715 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily PJW04_08720 IPR036107 Carbon storage regulator superfamily PJW04_08720 IPR003751 Translational regulator CsrA PJW04_08750 IPR007476 Putative exonuclease, RdgC PJW04_08860 IPR036614 Holliday junction resolvase RusA-like superfamily PJW04_08915 IPR023346 Lysozyme-like domain superfamily PJW04_08915 IPR000726 Glycoside hydrolase, family 19, catalytic PJW04_08965 IPR029045 ClpP/crotonase-like domain superfamily PJW04_08965 IPR001907 ATP-dependent Clp protease proteolytic subunit PJW04_08965 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA PJW04_08965 IPR033135 ClpP, histidine active site PJW04_08965 IPR018215 ClpP, Ser active site PJW04_09070 IPR004107 Integrase, SAM-like, N-terminal PJW04_09070 IPR011010 DNA breaking-rejoining enzyme, catalytic core PJW04_09070 IPR013762 Integrase-like, catalytic domain superfamily PJW04_09070 IPR002104 Integrase, catalytic domain PJW04_09070 IPR038488 Integrase, DNA-binding domain superfamily PJW04_09070 IPR025166 Integrase, DNA-binding domain PJW04_09070 IPR010998 Integrase/recombinase, N-terminal PJW04_09075 IPR004090 Chemotaxis methyl-accepting receptor PJW04_09075 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PJW04_09075 IPR001610 PAC motif PJW04_09075 IPR000014 PAS domain PJW04_09075 IPR000700 PAS-associated, C-terminal PJW04_09075 IPR013655 PAS fold-3 PJW04_09075 IPR035965 PAS domain superfamily PJW04_09080 IPR012093 Pirin PJW04_09080 IPR003829 Pirin, N-terminal domain PJW04_09080 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain PJW04_09080 IPR014710 RmlC-like jelly roll fold PJW04_09080 IPR011051 RmlC-like cupin domain superfamily PJW04_09085 IPR005119 LysR, substrate-binding PJW04_09085 IPR000847 Transcription regulator HTH, LysR PJW04_09085 IPR036390 Winged helix DNA-binding domain superfamily PJW04_09085 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_09110 IPR029056 Ribokinase-like PJW04_09110 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase PJW04_09110 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase PJW04_09125 IPR003714 PhoH-like protein PJW04_09125 IPR029060 PIN-like domain superfamily PJW04_09125 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_09125 IPR002716 PIN domain PJW04_09130 IPR036249 Thioredoxin-like superfamily PJW04_09130 IPR013766 Thioredoxin domain PJW04_09130 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant PJW04_09145 IPR020624 Schiff base-forming aldolase, conserved site PJW04_09145 IPR020625 Schiff base-forming aldolase, active site PJW04_09145 IPR002220 DapA-like PJW04_09145 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA PJW04_09145 IPR013785 Aldolase-type TIM barrel PJW04_09155 IPR000813 7Fe ferredoxin PJW04_09155 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PJW04_09155 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PJW04_09155 IPR022569 Ferredoxin, C-terminal PJW04_09160 IPR042257 2-keto-3-deoxy-galactonokinase, C-terminal domain PJW04_09160 IPR007729 2-keto-3-deoxy-galactonokinase PJW04_09160 IPR042258 2-keto-3-deoxy-galactonokinase, N-terminal PJW04_09165 IPR011042 Six-bladed beta-propeller, TolB-like PJW04_09165 IPR013658 SMP-30/Gluconolactonase/LRE-like region PJW04_09165 IPR005511 Senescence marker protein-30 (SMP-30) PJW04_09170 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site PJW04_09170 IPR036849 Enolase-like, C-terminal domain superfamily PJW04_09170 IPR029017 Enolase-like, N-terminal PJW04_09170 IPR029065 Enolase C-terminal domain-like PJW04_09170 IPR023592 D-galactonate dehydratase PJW04_09170 IPR034593 Mandelate racemase-like PJW04_09170 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal PJW04_09170 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain PJW04_09175 IPR000887 KDPG/KHG aldolase PJW04_09175 IPR013785 Aldolase-type TIM barrel PJW04_09180 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_09180 IPR037405 HTH-type transcriptional regulator GbpR, PBP2 domain PJW04_09180 IPR000847 Transcription regulator HTH, LysR PJW04_09180 IPR005119 LysR, substrate-binding PJW04_09180 IPR036390 Winged helix DNA-binding domain superfamily PJW04_09195 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily PJW04_09195 IPR015943 WD40/YVTN repeat-like-containing domain superfamily PJW04_09195 IPR014756 Immunoglobulin E-set PJW04_09195 IPR001956 Carbohydrate-binding module 3 PJW04_09195 IPR013783 Immunoglobulin-like fold PJW04_09195 IPR036966 Carbohydrate-binding module 3 superfamily PJW04_09195 IPR005102 Carbohydrate binding X2 domain PJW04_09210 IPR033403 Domain of unknown function DUF5110 PJW04_09210 IPR000322 Glycoside hydrolase family 31 PJW04_09210 IPR011013 Galactose mutarotase-like domain superfamily PJW04_09210 IPR032513 Alpha-glucosidase, domain of unknown function DUF4968 PJW04_09210 IPR013780 Glycosyl hydrolase, all-beta PJW04_09210 IPR037524 PA14/GLEYA domain PJW04_09210 IPR017853 Glycoside hydrolase superfamily PJW04_09220 IPR000577 Carbohydrate kinase, FGGY PJW04_09220 IPR018485 Carbohydrate kinase, FGGY, C-terminal PJW04_09220 IPR018483 Carbohydrate kinase, FGGY, conserved site PJW04_09220 IPR006000 Xylulokinase PJW04_09220 IPR018484 Carbohydrate kinase, FGGY, N-terminal PJW04_09225 IPR036237 Xylose isomerase-like superfamily PJW04_09225 IPR013452 Xylose isomerase, bacterial-type PJW04_09225 IPR001998 Xylose isomerase PJW04_09230 IPR020846 Major facilitator superfamily domain PJW04_09230 IPR005828 Major facilitator, sugar transporter-like PJW04_09230 IPR036259 MFS transporter superfamily PJW04_09230 IPR003663 Sugar/inositol transporter PJW04_09230 IPR005829 Sugar transporter, conserved site PJW04_09245 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain PJW04_09250 IPR022838 GTP cyclohydrolase FolE2 PJW04_09250 IPR003801 GTP cyclohydrolase FolE2/MptA PJW04_09260 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain PJW04_09260 IPR025866 Polymerase A arginine-rich C-terminal domain PJW04_09260 IPR010206 Poly(A) polymerase I PJW04_09260 IPR002646 Poly A polymerase, head domain PJW04_09265 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK PJW04_09265 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily PJW04_09270 IPR003700 Ketopantoate hydroxymethyltransferase PJW04_09270 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily PJW04_09270 IPR040442 Pyruvate kinase-like domain superfamily PJW04_09275 IPR003721 Pantoate-beta-alanine ligase PJW04_09275 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain PJW04_09275 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PJW04_09280 IPR003190 Aspartate decarboxylase PJW04_09280 IPR009010 Aspartate decarboxylase-like domain superfamily PJW04_09285 IPR001672 Phosphoglucose isomerase (PGI) PJW04_09285 IPR023096 Phosphoglucose isomerase, C-terminal PJW04_09285 IPR018189 Phosphoglucose isomerase, conserved site PJW04_09285 IPR035476 Phosphoglucose isomerase, SIS domain 1 PJW04_09285 IPR035482 Phosphoglucose isomerase, SIS domain 2 PJW04_09305 IPR001764 Glycoside hydrolase, family 3, N-terminal PJW04_09305 IPR026891 Fibronectin type III-like domain PJW04_09305 IPR002772 Glycoside hydrolase family 3 C-terminal domain PJW04_09305 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily PJW04_09305 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily PJW04_09305 IPR017853 Glycoside hydrolase superfamily PJW04_09305 IPR013783 Immunoglobulin-like fold PJW04_09315 IPR018212 Sodium/solute symporter, conserved site PJW04_09315 IPR001734 Sodium/solute symporter PJW04_09315 IPR038377 Sodium/glucose symporter superfamily PJW04_09320 IPR029787 Nucleotide cyclase PJW04_09320 IPR016132 Phytochrome chromophore attachment domain PJW04_09320 IPR001294 Phytochrome PJW04_09320 IPR000160 GGDEF domain PJW04_09320 IPR013515 Phytochrome, central region PJW04_09320 IPR003018 GAF domain PJW04_09320 IPR035919 EAL domain superfamily PJW04_09320 IPR001633 EAL domain PJW04_09320 IPR029016 GAF-like domain superfamily PJW04_09325 IPR001547 Glycoside hydrolase, family 5 PJW04_09325 IPR018087 Glycoside hydrolase, family 5, conserved site PJW04_09325 IPR009031 Carbohydrate binding module family 10 PJW04_09325 IPR017853 Glycoside hydrolase superfamily PJW04_09325 IPR002883 CBM10/dockerin domain PJW04_09325 IPR036601 CBM10 superfamily PJW04_09330 IPR011006 CheY-like superfamily PJW04_09330 IPR001789 Signal transduction response regulator, receiver domain PJW04_09340 IPR011005 Dihydropteroate synthase-like PJW04_09340 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial PJW04_09340 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type PJW04_09345 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily PJW04_09345 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PJW04_09350 IPR005829 Sugar transporter, conserved site PJW04_09350 IPR036259 MFS transporter superfamily PJW04_09350 IPR011701 Major facilitator superfamily PJW04_09350 IPR020846 Major facilitator superfamily domain PJW04_09355 IPR015942 Asp/Glu/hydantoin racemase PJW04_09355 IPR001920 Asp/Glu racemase PJW04_09355 IPR018187 Asp/Glu racemase, active site 1 PJW04_09355 IPR033134 Asp/Glu racemase, active site 2 PJW04_09355 IPR004380 Aspartate racemase PJW04_09365 IPR006094 FAD linked oxidase, N-terminal PJW04_09365 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal PJW04_09365 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily PJW04_09365 IPR016169 FAD-binding, type PCMH, subdomain 2 PJW04_09365 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase PJW04_09365 IPR036318 FAD-binding, type PCMH-like superfamily PJW04_09365 IPR016166 FAD-binding domain, PCMH-type PJW04_09365 IPR016167 FAD-binding, type PCMH, subdomain 1 PJW04_09370 IPR013785 Aldolase-type TIM barrel PJW04_09370 IPR005720 Dihydroorotate dehydrogenase domain PJW04_09370 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 PJW04_09370 IPR005719 Dihydroorotate dehydrogenase, class 2 PJW04_09370 IPR001295 Dihydroorotate dehydrogenase, conserved site PJW04_09385 IPR023510 Methylmalonate-semialdehyde dehydrogenase, Gram-positive bacteria PJW04_09385 IPR010061 Methylmalonate-semialdehyde dehydrogenase PJW04_09385 IPR016162 Aldehyde dehydrogenase, N-terminal PJW04_09385 IPR015590 Aldehyde dehydrogenase domain PJW04_09385 IPR016163 Aldehyde dehydrogenase, C-terminal PJW04_09385 IPR016160 Aldehyde dehydrogenase, cysteine active site PJW04_09385 IPR016161 Aldehyde/histidinol dehydrogenase PJW04_09410 IPR035251 ShlB, POTRA domain PJW04_09410 IPR034746 POTRA domain PJW04_09410 IPR027282 Two partner secretion pathway transporter PJW04_09410 IPR005565 Haemolysin activator HlyB, C-terminal PJW04_09410 IPR013686 Polypeptide-transport-associated, ShlB-type PJW04_09415 IPR011050 Pectin lyase fold/virulence factor PJW04_09415 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PJW04_09415 IPR008619 Filamentous haemagglutinin repeat PJW04_09415 IPR008638 Filamentous haemagglutinin, N-terminal PJW04_09415 IPR025157 Hemagglutinin repeat PJW04_09415 IPR028190 Novel toxin 21 PJW04_09415 IPR038181 Novel toxin 21 superfamily PJW04_09415 IPR012334 Pectin lyase fold PJW04_09415 IPR006914 VENN motif-containing domain PJW04_09450 IPR038330 TspO/MBR-related superfamily PJW04_09450 IPR004307 TspO/MBR-related protein PJW04_09455 IPR001342 Homoserine dehydrogenase, catalytic PJW04_09455 IPR036393 Acetylglutamate kinase-like superfamily PJW04_09455 IPR002912 ACT domain PJW04_09455 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain PJW04_09455 IPR001048 Aspartate/glutamate/uridylate kinase PJW04_09455 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding PJW04_09455 IPR001341 Aspartate kinase PJW04_09455 IPR018042 Aspartate kinase, conserved site PJW04_09455 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I PJW04_09455 IPR027795 CASTOR, ACT domain PJW04_09455 IPR019811 Homoserine dehydrogenase, conserved site PJW04_09455 IPR036291 NAD(P)-binding domain superfamily PJW04_09460 IPR000870 Homoserine kinase PJW04_09460 IPR006204 GHMP kinase N-terminal domain PJW04_09460 IPR020568 Ribosomal protein S5 domain 2-type fold PJW04_09460 IPR013750 GHMP kinase, C-terminal domain PJW04_09460 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PJW04_09460 IPR036554 GHMP kinase, C-terminal domain superfamily PJW04_09470 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site PJW04_09470 IPR001926 Pyridoxal-phosphate dependent enzyme PJW04_09470 IPR029144 Threonine synthase, N-terminal PJW04_09470 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme PJW04_09470 IPR037158 Threonine synthase, N-terminal domain superfamily PJW04_09470 IPR004450 Threonine synthase-like PJW04_09480 IPR018490 Cyclic nucleotide-binding-like PJW04_09480 IPR000595 Cyclic nucleotide-binding domain PJW04_09480 IPR012318 Crp-type HTH domain PJW04_09480 IPR014710 RmlC-like jelly roll fold PJW04_09480 IPR018335 Transcription regulator HTH, Crp-type, conserved site PJW04_09480 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_09480 IPR036390 Winged helix DNA-binding domain superfamily PJW04_09485 IPR006195 Aminoacyl-tRNA synthetase, class II PJW04_09485 IPR004154 Anticodon-binding PJW04_09485 IPR036621 Anticodon-binding domain superfamily PJW04_09485 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain PJW04_09485 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit PJW04_09485 IPR033656 Histidyl-anticodon-binding PJW04_09485 IPR015807 Histidine-tRNA ligase PJW04_09495 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal PJW04_09495 IPR013820 ATP phosphoribosyltransferase, catalytic domain PJW04_09495 IPR018198 ATP phosphoribosyltransferase, conserved site PJW04_09495 IPR001348 ATP phosphoribosyltransferase HisG PJW04_09495 IPR020621 ATP phosphoribosyltransferase HisG, long form PJW04_09495 IPR013115 Histidine biosynthesis HisG, C-terminal PJW04_09500 IPR012131 Histidinol dehydrogenase PJW04_09500 IPR022695 Histidinol dehydrogenase, monofunctional PJW04_09500 IPR001692 Histidinol dehydrogenase, conserved site PJW04_09500 IPR016161 Aldehyde/histidinol dehydrogenase PJW04_09505 IPR005861 Histidinol-phosphate aminotransferase family PJW04_09505 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PJW04_09505 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PJW04_09505 IPR004839 Aminotransferase, class I/classII PJW04_09505 IPR015424 Pyridoxal phosphate-dependent transferase PJW04_09510 IPR036412 HAD-like superfamily PJW04_09510 IPR006549 HAD-superfamily hydrolase,subfamily IIIA PJW04_09510 IPR023214 HAD superfamily PJW04_09510 IPR020566 Histidine biosynthesis bifunctional protein HisB PJW04_09510 IPR005954 Histidinol-phosphatase PJW04_09510 IPR006543 Histidinol-phosphate phosphatase PJW04_09510 IPR000807 Imidazoleglycerol-phosphate dehydratase PJW04_09510 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site PJW04_09510 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily PJW04_09510 IPR020568 Ribosomal protein S5 domain 2-type fold PJW04_09515 IPR017926 Glutamine amidotransferase PJW04_09515 IPR010139 Imidazole glycerol phosphate synthase, subunit H PJW04_09515 IPR029062 Class I glutamine amidotransferase-like PJW04_09520 IPR013785 Aldolase-type TIM barrel PJW04_09520 IPR006062 Histidine biosynthesis PJW04_09520 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA PJW04_09520 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase PJW04_09520 IPR011060 Ribulose-phosphate binding barrel PJW04_09525 IPR013785 Aldolase-type TIM barrel PJW04_09525 IPR004651 Histidine biosynthesis, HisF PJW04_09525 IPR011060 Ribulose-phosphate binding barrel PJW04_09525 IPR006062 Histidine biosynthesis PJW04_09530 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase PJW04_09530 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like PJW04_09530 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain PJW04_09530 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily PJW04_09530 IPR023019 Histidine biosynthesis bifunctional protein HisIE PJW04_09545 IPR023943 Enolase-phosphatase E1 PJW04_09545 IPR036412 HAD-like superfamily PJW04_09545 IPR006439 HAD hydrolase, subfamily IA PJW04_09545 IPR023214 HAD superfamily PJW04_09550 IPR004313 Acireductone dioxygenase ARD family PJW04_09550 IPR023956 Acireductone dioxygenase ARD, bacteria PJW04_09550 IPR011051 RmlC-like cupin domain superfamily PJW04_09550 IPR014710 RmlC-like jelly roll fold PJW04_09555 IPR017714 Methylthioribulose-1-phosphate dehydratase PJW04_09555 IPR036409 Class II aldolase/adducin N-terminal domain superfamily PJW04_09555 IPR001303 Class II aldolase/adducin N-terminal PJW04_09560 IPR004758 Amino acid transporter PJW04_09560 IPR002293 Amino acid/polyamine transporter I PJW04_09565 IPR004758 Amino acid transporter PJW04_09565 IPR002293 Amino acid/polyamine transporter I PJW04_09575 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 PJW04_09575 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PJW04_09575 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PJW04_09575 IPR002912 ACT domain PJW04_09575 IPR036291 NAD(P)-binding domain superfamily PJW04_09575 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain PJW04_09580 IPR016164 FAD-linked oxidase-like, C-terminal PJW04_09580 IPR004490 Glycolate oxidase subunit GlcD PJW04_09580 IPR006094 FAD linked oxidase, N-terminal PJW04_09580 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 PJW04_09580 IPR016166 FAD-binding domain, PCMH-type PJW04_09580 IPR004113 FAD-linked oxidase, C-terminal PJW04_09580 IPR036318 FAD-binding, type PCMH-like superfamily PJW04_09600 IPR015365 Elongation factor P, C-terminal PJW04_09600 IPR012340 Nucleic acid-binding, OB-fold PJW04_09600 IPR014722 Ribosomal protein L2, domain 2 PJW04_09600 IPR020599 Translation elongation factor P/YeiP PJW04_09600 IPR013185 Translation elongation factor, KOW-like PJW04_09600 IPR008991 Translation protein SH3-like domain superfamily PJW04_09600 IPR013852 Translation elongation factor P/YeiP, conserved site PJW04_09600 IPR001059 Translation elongation factor P/YeiP, central PJW04_09600 IPR011897 Translation elongation factor P-like, YeiP PJW04_09605 IPR036291 NAD(P)-binding domain superfamily PJW04_09605 IPR020904 Short-chain dehydrogenase/reductase, conserved site PJW04_09605 IPR002347 Short-chain dehydrogenase/reductase SDR PJW04_09610 IPR013785 Aldolase-type TIM barrel PJW04_09610 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site PJW04_09610 IPR000891 Pyruvate carboxyltransferase PJW04_09620 IPR001753 Enoyl-CoA hydratase/isomerase PJW04_09620 IPR014748 Enoyl-CoA hydratase, C-terminal PJW04_09620 IPR029045 ClpP/crotonase-like domain superfamily PJW04_09620 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site PJW04_09630 IPR030389 FeoB-type guanine nucleotide-binding (G) domain PJW04_09630 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain PJW04_09630 IPR006073 GTP binding domain PJW04_09630 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_09630 IPR011640 Ferrous iron transport protein B, C-terminal PJW04_09630 IPR003373 Ferrous iron transport protein B PJW04_09645 IPR015424 Pyridoxal phosphate-dependent transferase PJW04_09645 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PJW04_09645 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PJW04_09645 IPR004839 Aminotransferase, class I/classII PJW04_09650 IPR005302 Molybdenum cofactor sulfurase, C-terminal PJW04_09650 IPR005163 3-alpha domain PJW04_09650 IPR011037 Pyruvate kinase-like, insert domain superfamily PJW04_09655 IPR022663 Dihydrodipicolinate reductase, C-terminal PJW04_09655 IPR000846 Dihydrodipicolinate reductase, N-terminal PJW04_09655 IPR022664 Dihydrodipicolinate reductase, conserved site PJW04_09655 IPR023940 Dihydrodipicolinate reductase PJW04_09655 IPR036291 NAD(P)-binding domain superfamily PJW04_09660 IPR006274 Carbamoyl-phosphate synthase, small subunit PJW04_09660 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain PJW04_09660 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily PJW04_09660 IPR029062 Class I glutamine amidotransferase-like PJW04_09660 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain PJW04_09660 IPR017926 Glutamine amidotransferase PJW04_09670 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain PJW04_09670 IPR011761 ATP-grasp fold PJW04_09670 IPR016185 Pre-ATP-grasp domain superfamily PJW04_09670 IPR006275 Carbamoyl-phosphate synthase, large subunit PJW04_09670 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain PJW04_09670 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily PJW04_09670 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain PJW04_09670 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain PJW04_09670 IPR036914 Methylglyoxal synthase-like domain superfamily PJW04_09670 IPR011607 Methylglyoxal synthase-like domain PJW04_09675 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal PJW04_09675 IPR018151 Transcription elongation factor, GreA/GreB, conserved site PJW04_09675 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily PJW04_09675 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily PJW04_09675 IPR006359 Transcription elongation factor GreA PJW04_09675 IPR028624 Transcription elongation factor GreA/GreB PJW04_09675 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal PJW04_09675 IPR023459 Transcription elongation factor GreA/GreB family PJW04_09685 IPR041122 RecJ, OB domain PJW04_09685 IPR038763 DHH phosphoesterase superfamily PJW04_09685 IPR004610 Bacterial RecJ exonuclease PJW04_09685 IPR003156 DHHA1 domain PJW04_09685 IPR001667 DDH domain PJW04_09695 IPR011006 CheY-like superfamily PJW04_09695 IPR007492 LytTR DNA-binding domain PJW04_09695 IPR001789 Signal transduction response regulator, receiver domain PJW04_09705 IPR012340 Nucleic acid-binding, OB-fold PJW04_09705 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) PJW04_09705 IPR006195 Aminoacyl-tRNA synthetase, class II PJW04_09705 IPR002313 Lysine-tRNA ligase, class II PJW04_09705 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal PJW04_09705 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type PJW04_09710 IPR037522 HD-GYP domain PJW04_09710 IPR003607 HD/PDEase domain PJW04_09710 IPR001789 Signal transduction response regulator, receiver domain PJW04_09710 IPR011006 CheY-like superfamily PJW04_09715 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW04_09715 IPR001789 Signal transduction response regulator, receiver domain PJW04_09715 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain PJW04_09715 IPR036641 HPT domain superfamily PJW04_09715 IPR011006 CheY-like superfamily PJW04_09715 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PJW04_09715 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PJW04_09715 IPR005467 Histidine kinase domain PJW04_09715 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_09715 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_09720 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_09720 IPR001789 Signal transduction response regulator, receiver domain PJW04_09720 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain PJW04_09720 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW04_09720 IPR036641 HPT domain superfamily PJW04_09720 IPR011006 CheY-like superfamily PJW04_09720 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_09720 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PJW04_09720 IPR005467 Histidine kinase domain PJW04_09720 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PJW04_09725 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site PJW04_09725 IPR014748 Enoyl-CoA hydratase, C-terminal PJW04_09725 IPR001753 Enoyl-CoA hydratase/isomerase PJW04_09725 IPR029045 ClpP/crotonase-like domain superfamily PJW04_09730 IPR025110 AMP-binding enzyme, C-terminal domain PJW04_09730 IPR020845 AMP-binding, conserved site PJW04_09730 IPR000873 AMP-dependent synthetase/ligase PJW04_09730 IPR042099 AMP-dependent synthetase-like superfamily PJW04_09745 IPR036008 Aconitase, iron-sulfur domain PJW04_09745 IPR018136 Aconitase family, 4Fe-4S cluster binding site PJW04_09745 IPR006249 Aconitase/Iron-responsive element-binding protein 2 PJW04_09745 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain PJW04_09745 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain PJW04_09745 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 PJW04_09745 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel PJW04_09760 IPR015932 Aconitase, domain 2 PJW04_09760 IPR036288 Aconitase B, HEAT-like domain superfamily PJW04_09760 IPR015933 Aconitase B, HEAT-like domain PJW04_09760 IPR004406 Aconitase B PJW04_09760 IPR036008 Aconitase, iron-sulfur domain PJW04_09760 IPR015929 Aconitase B, swivel PJW04_09760 IPR018136 Aconitase family, 4Fe-4S cluster binding site PJW04_09760 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel PJW04_09760 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain PJW04_09760 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 PJW04_09765 IPR019913 Pyrimidine utilisation protein RutD PJW04_09765 IPR000073 Alpha/beta hydrolase fold-1 PJW04_09765 IPR029058 Alpha/Beta hydrolase fold PJW04_09770 IPR001633 EAL domain PJW04_09770 IPR005330 MHYT domain PJW04_09770 IPR000160 GGDEF domain PJW04_09770 IPR035919 EAL domain superfamily PJW04_09770 IPR029787 Nucleotide cyclase PJW04_09775 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type PJW04_09775 IPR035909 Methylesterase CheB, C-terminal PJW04_09775 IPR011006 CheY-like superfamily PJW04_09775 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase PJW04_09775 IPR001789 Signal transduction response regulator, receiver domain PJW04_09780 IPR038592 CheD-like superfamily PJW04_09780 IPR005659 Chemoreceptor glutamine deamidase CheD PJW04_09780 IPR011324 Cytotoxic necrotizing factor-like, catalytic PJW04_09785 IPR026024 Chemotaxis protein methyltransferase CheR PJW04_09785 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal PJW04_09785 IPR000780 MCP methyltransferase, CheR-type PJW04_09785 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily PJW04_09785 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW04_09785 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal PJW04_09790 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding PJW04_09790 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily PJW04_09790 IPR004090 Chemotaxis methyl-accepting receptor PJW04_09790 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site PJW04_09790 IPR003660 HAMP domain PJW04_09790 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PJW04_09800 IPR039315 Chemotaxis protein CheW PJW04_09800 IPR036061 CheW-like domain superfamily PJW04_09800 IPR002545 CheW-like domain PJW04_09805 IPR009875 PilZ domain PJW04_09805 IPR012349 FMN-binding split barrel PJW04_09805 IPR023787 Type III secretion system flagellar brake protein YcgR PJW04_09805 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal PJW04_09810 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding PJW04_09810 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PJW04_09810 IPR003660 HAMP domain PJW04_09810 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site PJW04_09810 IPR004090 Chemotaxis methyl-accepting receptor PJW04_09810 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily PJW04_09815 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding PJW04_09815 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PJW04_09815 IPR003660 HAMP domain PJW04_09815 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily PJW04_09815 IPR004090 Chemotaxis methyl-accepting receptor PJW04_09815 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site PJW04_09820 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PJW04_09820 IPR003660 HAMP domain PJW04_09820 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding PJW04_09820 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site PJW04_09820 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily PJW04_09820 IPR004090 Chemotaxis methyl-accepting receptor PJW04_09825 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PJW04_09825 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily PJW04_09825 IPR004090 Chemotaxis methyl-accepting receptor PJW04_09825 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding PJW04_09825 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site PJW04_09825 IPR003660 HAMP domain PJW04_09830 IPR004090 Chemotaxis methyl-accepting receptor PJW04_09830 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily PJW04_09830 IPR003660 HAMP domain PJW04_09830 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site PJW04_09830 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PJW04_09830 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding PJW04_09840 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily PJW04_09840 IPR004090 Chemotaxis methyl-accepting receptor PJW04_09840 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site PJW04_09840 IPR003660 HAMP domain PJW04_09840 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PJW04_09840 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding PJW04_09845 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding PJW04_09845 IPR003660 HAMP domain PJW04_09845 IPR004090 Chemotaxis methyl-accepting receptor PJW04_09845 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily PJW04_09845 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site PJW04_09845 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PJW04_09850 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding PJW04_09850 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PJW04_09850 IPR003660 HAMP domain PJW04_09850 IPR004090 Chemotaxis methyl-accepting receptor PJW04_09850 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily PJW04_09850 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site PJW04_09855 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily PJW04_09855 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site PJW04_09855 IPR003660 HAMP domain PJW04_09855 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PJW04_09855 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding PJW04_09855 IPR004090 Chemotaxis methyl-accepting receptor PJW04_09865 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site PJW04_09865 IPR003660 HAMP domain PJW04_09865 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PJW04_09865 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding PJW04_09865 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily PJW04_09865 IPR004090 Chemotaxis methyl-accepting receptor PJW04_09870 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PJW04_09870 IPR003660 HAMP domain PJW04_09870 IPR004010 Double Cache domain 2 PJW04_09870 IPR000727 Target SNARE coiled-coil homology domain PJW04_09870 IPR004090 Chemotaxis methyl-accepting receptor PJW04_09870 IPR033480 Single Cache domain 2 PJW04_09880 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PJW04_09880 IPR003660 HAMP domain PJW04_09880 IPR004090 Chemotaxis methyl-accepting receptor PJW04_09885 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PJW04_09885 IPR003660 HAMP domain PJW04_09885 IPR004090 Chemotaxis methyl-accepting receptor PJW04_09890 IPR036641 HPT domain superfamily PJW04_09890 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW04_09890 IPR005467 Histidine kinase domain PJW04_09890 IPR002545 CheW-like domain PJW04_09890 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily PJW04_09890 IPR036061 CheW-like domain superfamily PJW04_09890 IPR015162 CheY binding PJW04_09890 IPR035891 CheY-binding domain of CheA PJW04_09890 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain PJW04_09890 IPR004105 Histidine kinase CheA-like, homodimeric domain PJW04_09890 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PJW04_09890 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_09890 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_09895 IPR001789 Signal transduction response regulator, receiver domain PJW04_09895 IPR011006 CheY-like superfamily PJW04_09905 IPR036061 CheW-like domain superfamily PJW04_09905 IPR002545 CheW-like domain PJW04_09905 IPR039315 Chemotaxis protein CheW PJW04_09910 IPR025669 AAA domain PJW04_09910 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_09915 IPR025713 Motility protein B, N-terminal domain PJW04_09915 IPR006665 OmpA-like domain PJW04_09915 IPR036737 OmpA-like domain superfamily PJW04_09920 IPR000540 Flagellar motor protein MotA, conserved site PJW04_09920 IPR002898 MotA/TolQ/ExbB proton channel PJW04_09995 IPR001789 Signal transduction response regulator, receiver domain PJW04_09995 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily PJW04_09995 IPR004105 Histidine kinase CheA-like, homodimeric domain PJW04_09995 IPR036061 CheW-like domain superfamily PJW04_09995 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain PJW04_09995 IPR011006 CheY-like superfamily PJW04_09995 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_09995 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_09995 IPR005467 Histidine kinase domain PJW04_09995 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PJW04_09995 IPR036641 HPT domain superfamily PJW04_09995 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW04_09995 IPR002545 CheW-like domain PJW04_10000 IPR007439 Chemotaxis phosphatase, CheZ PJW04_10005 IPR011006 CheY-like superfamily PJW04_10005 IPR001789 Signal transduction response regulator, receiver domain PJW04_10010 IPR014284 RNA polymerase sigma-70 like domain PJW04_10010 IPR000943 RNA polymerase sigma-70 PJW04_10010 IPR013325 RNA polymerase sigma factor, region 2 PJW04_10010 IPR007624 RNA polymerase sigma-70 region 3 PJW04_10010 IPR007630 RNA polymerase sigma-70 region 4 PJW04_10010 IPR012845 RNA polymerase sigma factor, FliA/WhiG PJW04_10010 IPR028617 RNA polymerase sigma factor FliA PJW04_10010 IPR007627 RNA polymerase sigma-70 region 2 PJW04_10010 IPR013324 RNA polymerase sigma factor, region 3/4-like PJW04_10015 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_10015 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 PJW04_10015 IPR025501 ATP binding protein MinD PJW04_10020 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain PJW04_10020 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_10020 IPR020006 Flagellar biosynthesis protein FlhF PJW04_10020 IPR003593 AAA+ ATPase domain PJW04_10025 IPR006301 Flagellar biosynthesis protein FlhA PJW04_10025 IPR001712 Type III secretion system FHIPEP PJW04_10025 IPR042196 FHIPEP, domain 4 PJW04_10025 IPR042193 FHIPEP, domain 3 PJW04_10025 IPR042194 FHIPEP, domain 1 PJW04_10025 IPR025505 FHIPEP conserved site PJW04_10030 IPR006135 Type III secretion system substrate exporter PJW04_10030 IPR029025 Type III secretion system substrate exporter, C-terminal PJW04_10030 IPR006136 Flagellar biosynthetic protein FlhB PJW04_10035 IPR029787 Nucleotide cyclase PJW04_10035 IPR000160 GGDEF domain PJW04_10035 IPR035919 EAL domain superfamily PJW04_10035 IPR001633 EAL domain PJW04_10035 IPR005330 MHYT domain PJW04_10040 IPR000160 GGDEF domain PJW04_10040 IPR029787 Nucleotide cyclase PJW04_10045 IPR000160 GGDEF domain PJW04_10045 IPR029787 Nucleotide cyclase PJW04_10050 IPR006303 Flagellar biosynthesis protein FliR PJW04_10050 IPR002010 Type III secretion system inner membrane R protein PJW04_10055 IPR006305 Flagellar biosynthesis protein FliQ PJW04_10055 IPR002191 Bacterial export protein family 3 PJW04_10065 IPR005838 Type III secretion system inner membrane P protein PJW04_10065 IPR005837 Flagellar transport protein FliP PJW04_10070 IPR022781 Flagellar biosynthesis protein, FliO PJW04_10075 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb PJW04_10075 IPR012826 Flagellar motor switch FliN PJW04_10075 IPR036429 SpoA-like superfamily PJW04_10075 IPR001543 Surface presentation of antigen (SpoA) PJW04_10080 IPR036429 SpoA-like superfamily PJW04_10080 IPR001543 Surface presentation of antigen (SpoA) PJW04_10080 IPR001689 Flagellar motor switch protein FliM PJW04_10080 IPR028976 CheC-like superfamily PJW04_10100 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site PJW04_10100 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain PJW04_10100 IPR032463 ATPase, type III secretion system, FliI PJW04_10100 IPR005714 ATPase, type III secretion system, FliI/YscN PJW04_10100 IPR003593 AAA+ ATPase domain PJW04_10100 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_10100 IPR040627 T3SS EscN ATPase, C-terminal PJW04_10100 IPR020005 Flagellar export ATPase FliI, clade 1 PJW04_10110 IPR000090 Flagellar motor switch protein FliG PJW04_10110 IPR023087 Flagellar motor switch protein FliG, C-terminal PJW04_10110 IPR032779 Flagellar motor switch protein FliG, middle domain PJW04_10110 IPR028263 Flagellar motor switch protein FliG, N-terminal domain PJW04_10110 IPR011002 Flagellar motor switch protein FliG, alpha-helical PJW04_10115 IPR013556 Flagellar M-ring C-terminal PJW04_10115 IPR000067 Flagellar M-ring protein FliF PJW04_10115 IPR006182 Secretory protein YscJ/FliF PJW04_10120 IPR001624 Flagellar hook-basal body complex protein FliE PJW04_10125 IPR029044 Nucleotide-diphospho-sugar transferases PJW04_10125 IPR001173 Glycosyltransferase 2-like PJW04_10125 IPR001296 Glycosyl transferase, family 1 PJW04_10130 IPR007345 Polysaccharide pyruvyl transferase PJW04_10155 IPR002347 Short-chain dehydrogenase/reductase SDR PJW04_10155 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase PJW04_10155 IPR036291 NAD(P)-binding domain superfamily PJW04_10160 IPR002347 Short-chain dehydrogenase/reductase SDR PJW04_10160 IPR020904 Short-chain dehydrogenase/reductase, conserved site PJW04_10160 IPR036291 NAD(P)-binding domain superfamily PJW04_10165 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 PJW04_10165 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal PJW04_10165 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III PJW04_10165 IPR016039 Thiolase-like PJW04_10175 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase PJW04_10175 IPR015424 Pyridoxal phosphate-dependent transferase PJW04_10175 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PJW04_10180 IPR002197 DNA binding HTH domain, Fis-type PJW04_10180 IPR003593 AAA+ ATPase domain PJW04_10180 IPR009057 Homeobox-like domain superfamily PJW04_10180 IPR010518 Flagellar regulatory FleQ PJW04_10180 IPR011006 CheY-like superfamily PJW04_10180 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_10180 IPR002078 RNA polymerase sigma factor 54 interaction domain PJW04_10180 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PJW04_10180 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PJW04_10180 IPR025944 Sigma-54 interaction domain, conserved site PJW04_10185 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type PJW04_10185 IPR035909 Methylesterase CheB, C-terminal PJW04_10185 IPR011006 CheY-like superfamily PJW04_10185 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase PJW04_10185 IPR001789 Signal transduction response regulator, receiver domain PJW04_10190 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily PJW04_10190 IPR007634 RNA polymerase sigma factor 54, DNA-binding PJW04_10190 IPR007046 RNA polymerase sigma factor 54, core-binding domain PJW04_10190 IPR000394 RNA polymerase sigma factor 54 PJW04_10195 IPR000792 Transcription regulator LuxR, C-terminal PJW04_10195 IPR001789 Signal transduction response regulator, receiver domain PJW04_10195 IPR016032 Signal transduction response regulator, C-terminal effector PJW04_10195 IPR011006 CheY-like superfamily PJW04_10210 IPR003713 Flagellar protein FliS PJW04_10210 IPR036584 Flagellar protein FliS superfamily PJW04_10215 IPR003481 Flagellar hook-associated protein 2, N-terminal PJW04_10215 IPR040026 Flagellar hook-associated protein 2 PJW04_10215 IPR010810 Flagellin hook, IN motif PJW04_10215 IPR010809 Flagellar hook-associated protein 2, C-terminal PJW04_10220 IPR042187 Flagellin, C-terminal domain, subdomain 2 PJW04_10220 IPR001029 Flagellin, D0/D1 domain PJW04_10220 IPR001492 Flagellin PJW04_10230 IPR013384 Flagellar hook-associated protein 3 PJW04_10230 IPR001029 Flagellin, D0/D1 domain PJW04_10235 IPR010810 Flagellin hook, IN motif PJW04_10235 IPR010930 Flagellar basal-body/hook protein, C-terminal domain PJW04_10235 IPR002371 Flagellar hook-associated protein 1 PJW04_10240 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain PJW04_10240 IPR013377 Peptidoglycan hydrolase FlgJ PJW04_10240 IPR019301 Flagellar protein FlgJ, N-terminal PJW04_10245 IPR001782 Flagellar P-ring protein PJW04_10250 IPR000527 Flagellar L-ring protein PJW04_10255 IPR001444 Flagellar basal body rod protein, N-terminal PJW04_10255 IPR019776 Flagellar basal body rod protein, conserved site PJW04_10255 IPR020013 Flagellar hook-basal body protein, FlgE/F/G PJW04_10255 IPR010930 Flagellar basal-body/hook protein, C-terminal domain PJW04_10255 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like PJW04_10255 IPR012834 Flagellar basal-body rod FlgG PJW04_10265 IPR001444 Flagellar basal body rod protein, N-terminal PJW04_10265 IPR019776 Flagellar basal body rod protein, conserved site PJW04_10265 IPR010930 Flagellar basal-body/hook protein, C-terminal domain PJW04_10265 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like PJW04_10265 IPR020013 Flagellar hook-basal body protein, FlgE/F/G PJW04_10270 IPR011491 Flagellar hook protein FlgE PJW04_10270 IPR037058 Flagellar hook protein FlgE superfamily PJW04_10270 IPR001444 Flagellar basal body rod protein, N-terminal PJW04_10270 IPR019776 Flagellar basal body rod protein, conserved site PJW04_10270 IPR020013 Flagellar hook-basal body protein, FlgE/F/G PJW04_10270 IPR010930 Flagellar basal-body/hook protein, C-terminal domain PJW04_10270 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like PJW04_10275 IPR005648 Flagellar hook capping protein PJW04_10280 IPR019776 Flagellar basal body rod protein, conserved site PJW04_10280 IPR010930 Flagellar basal-body/hook protein, C-terminal domain PJW04_10280 IPR001444 Flagellar basal body rod protein, N-terminal PJW04_10280 IPR006299 Flagellar basal-body rod protein FlgC PJW04_10285 IPR019776 Flagellar basal body rod protein, conserved site PJW04_10285 IPR006300 Flagellar basal-body rod protein FlgB PJW04_10290 IPR024181 Chemotaxis response regulator CheV PJW04_10290 IPR036061 CheW-like domain superfamily PJW04_10290 IPR002545 CheW-like domain PJW04_10290 IPR011006 CheY-like superfamily PJW04_10290 IPR001789 Signal transduction response regulator, receiver domain PJW04_10310 IPR035965 PAS domain superfamily PJW04_10310 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW04_10310 IPR013767 PAS fold PJW04_10310 IPR000014 PAS domain PJW04_10310 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PJW04_10310 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PJW04_10310 IPR005467 Histidine kinase domain PJW04_10310 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_10310 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_10315 IPR001633 EAL domain PJW04_10315 IPR035919 EAL domain superfamily PJW04_10315 IPR000160 GGDEF domain PJW04_10315 IPR005330 MHYT domain PJW04_10315 IPR029787 Nucleotide cyclase PJW04_10320 IPR005467 Histidine kinase domain PJW04_10320 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW04_10320 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_10320 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain PJW04_10320 IPR017203 Signal transduction histidine kinase, NreB PJW04_10320 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_10325 IPR029787 Nucleotide cyclase PJW04_10325 IPR001633 EAL domain PJW04_10325 IPR035919 EAL domain superfamily PJW04_10325 IPR000160 GGDEF domain PJW04_10325 IPR005330 MHYT domain PJW04_10340 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain PJW04_10340 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PJW04_10340 IPR000727 Target SNARE coiled-coil homology domain PJW04_10340 IPR003660 HAMP domain PJW04_10340 IPR004090 Chemotaxis methyl-accepting receptor PJW04_10345 IPR035932 HflD-like superfamily PJW04_10345 IPR007451 High frequency lysogenization protein HflD PJW04_10350 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PJW04_10350 IPR004506 tRNA-specific 2-thiouridylase PJW04_10350 IPR023382 Adenine nucleotide alpha hydrolase-like domains PJW04_10355 IPR020476 NUDIX hydrolase PJW04_10355 IPR015797 NUDIX hydrolase-like domain superfamily PJW04_10355 IPR020084 NUDIX hydrolase, conserved site PJW04_10355 IPR000086 NUDIX hydrolase domain PJW04_10355 IPR033713 Phosphatase NudJ PJW04_10360 IPR022935 ATP-dependent Clp protease adaptor protein ClpS PJW04_10360 IPR003769 Adaptor protein ClpS, core PJW04_10360 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like PJW04_10365 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_10365 IPR041546 ClpA/ClpB, AAA lid domain PJW04_10365 IPR028299 ClpA/B, conserved site 2 PJW04_10365 IPR001270 ClpA/B family PJW04_10365 IPR018368 ClpA/B, conserved site 1 PJW04_10365 IPR004176 Clp, N-terminal PJW04_10365 IPR036628 Clp, N-terminal domain superfamily PJW04_10365 IPR019489 Clp ATPase, C-terminal PJW04_10365 IPR003959 ATPase, AAA-type, core PJW04_10365 IPR003593 AAA+ ATPase domain PJW04_10365 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA PJW04_10370 IPR012340 Nucleic acid-binding, OB-fold PJW04_10370 IPR006196 RNA-binding domain, S1, IF1 type PJW04_10370 IPR022967 RNA-binding domain, S1 PJW04_10370 IPR004368 Translation initiation factor IF-1 PJW04_10375 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal PJW04_10375 IPR016181 Acyl-CoA N-acyltransferase PJW04_10375 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase PJW04_10390 IPR036188 FAD/NAD(P)-binding domain superfamily PJW04_10390 IPR023753 FAD/NAD(P)-binding domain PJW04_10390 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site PJW04_10390 IPR005982 Thioredoxin reductase PJW04_10395 IPR003593 AAA+ ATPase domain PJW04_10395 IPR041027 FtsK alpha domain PJW04_10395 IPR025199 DNA translocase FtsK, 4TM region PJW04_10395 IPR018541 FtsK gamma domain PJW04_10395 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_10395 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_10395 IPR036390 Winged helix DNA-binding domain superfamily PJW04_10395 IPR002543 FtsK domain PJW04_10405 IPR029046 Lipoprotein localisation LolA/LolB/LppX PJW04_10405 IPR004564 Outer membrane lipoprotein carrier protein LolA-like PJW04_10405 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria PJW04_10420 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_10420 IPR021886 MgsA AAA+ ATPase C-terminal PJW04_10420 IPR032423 AAA C-terminal domain PJW04_10420 IPR003959 ATPase, AAA-type, core PJW04_10420 IPR003593 AAA+ ATPase domain PJW04_10420 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal PJW04_10425 IPR003691 Putative fluoride ion transporter CrcB PJW04_10430 IPR020616 Thiolase, N-terminal PJW04_10430 IPR020613 Thiolase, conserved site PJW04_10430 IPR002155 Thiolase PJW04_10430 IPR020610 Thiolase, active site PJW04_10430 IPR020615 Thiolase, acyl-enzyme intermediate active site PJW04_10430 IPR016039 Thiolase-like PJW04_10430 IPR020617 Thiolase, C-terminal PJW04_10435 IPR036291 NAD(P)-binding domain superfamily PJW04_10435 IPR001753 Enoyl-CoA hydratase/isomerase PJW04_10435 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding PJW04_10435 IPR013328 6-phosphogluconate dehydrogenase, domain 2 PJW04_10435 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily PJW04_10435 IPR029045 ClpP/crotonase-like domain superfamily PJW04_10435 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal PJW04_10445 IPR023005 Nucleoside diphosphate kinase, active site PJW04_10445 IPR001564 Nucleoside diphosphate kinase PJW04_10445 IPR034907 Nucleoside diphosphate kinase-like domain PJW04_10445 IPR036850 Nucleoside diphosphate kinase-like domain superfamily PJW04_10450 IPR013785 Aldolase-type TIM barrel PJW04_10450 IPR040072 Methyltransferase (Class A) PJW04_10450 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr PJW04_10450 IPR007197 Radical SAM PJW04_10450 IPR027492 Dual-specificity RNA methyltransferase RlmN PJW04_10460 IPR001387 Cro/C1-type helix-turn-helix domain PJW04_10460 IPR025194 Domain of unknown function DUF4115 PJW04_10460 IPR010982 Lambda repressor-like, DNA-binding domain superfamily PJW04_10460 IPR023690 Cytoskeleton protein RodZ PJW04_10470 IPR002372 Pyrrolo-quinoline quinone repeat PJW04_10470 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PJW04_10470 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily PJW04_10470 IPR015943 WD40/YVTN repeat-like-containing domain superfamily PJW04_10470 IPR017687 Outer membrane protein assembly factor BamB PJW04_10475 IPR003593 AAA+ ATPase domain PJW04_10475 IPR031166 EngA-type guanine nucleotide-binding (G) domain PJW04_10475 IPR016484 GTP-binding protein EngA PJW04_10475 IPR006073 GTP binding domain PJW04_10475 IPR032859 GTPase Der, C-terminal KH-domain-like PJW04_10475 IPR015946 K homology domain-like, alpha/beta PJW04_10475 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_10475 IPR005225 Small GTP-binding protein domain PJW04_10480 IPR036135 MoeA, N-terminal and linker domain superfamily PJW04_10480 IPR005110 MoeA, N-terminal and linker domain PJW04_10480 IPR036688 MoeA, C-terminal, domain IV superfamily PJW04_10480 IPR005111 MoeA, C-terminal, domain IV PJW04_10480 IPR008284 Molybdenum cofactor biosynthesis, conserved site PJW04_10480 IPR001453 MoaB/Mog domain PJW04_10480 IPR036425 MoaB/Mog-like domain superfamily PJW04_10480 IPR038987 Molybdopterin biosynthesis protein MoeA-like PJW04_10485 IPR000594 THIF-type NAD/FAD binding fold PJW04_10485 IPR035985 Ubiquitin-activating enzyme PJW04_10515 IPR036291 NAD(P)-binding domain superfamily PJW04_10515 IPR011032 GroES-like superfamily PJW04_10515 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site PJW04_10515 IPR027399 Alcohol dehydrogenase GroES-associated PJW04_10515 IPR013149 Alcohol dehydrogenase, C-terminal PJW04_10515 IPR013154 Alcohol dehydrogenase, N-terminal PJW04_10525 IPR037493 Exodeoxyribonuclease III-like PJW04_10525 IPR005135 Endonuclease/exonuclease/phosphatase PJW04_10525 IPR004808 AP endonuclease 1 PJW04_10525 IPR020847 AP endonuclease 1, binding site PJW04_10525 IPR020848 AP endonuclease 1, conserved site PJW04_10525 IPR036691 Endonuclease/exonuclease/phosphatase superfamily PJW04_10535 IPR036135 MoeA, N-terminal and linker domain superfamily PJW04_10535 IPR036425 MoaB/Mog-like domain superfamily PJW04_10535 IPR001453 MoaB/Mog domain PJW04_10535 IPR008284 Molybdenum cofactor biosynthesis, conserved site PJW04_10535 IPR038987 Molybdopterin biosynthesis protein MoeA-like PJW04_10535 IPR005111 MoeA, C-terminal, domain IV PJW04_10535 IPR036688 MoeA, C-terminal, domain IV superfamily PJW04_10535 IPR005110 MoeA, N-terminal and linker domain PJW04_10540 IPR029044 Nucleotide-diphospho-sugar transferases PJW04_10540 IPR013482 Molybdenum cofactor guanylyltransferase PJW04_10540 IPR025877 MobA-like NTP transferase PJW04_10555 IPR036291 NAD(P)-binding domain superfamily PJW04_10555 IPR020904 Short-chain dehydrogenase/reductase, conserved site PJW04_10555 IPR002347 Short-chain dehydrogenase/reductase SDR PJW04_10560 IPR036188 FAD/NAD(P)-binding domain superfamily PJW04_10565 IPR028281 Siroheme synthase, central domain PJW04_10565 IPR019478 Sirohaem synthase, dimerisation domain PJW04_10565 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site PJW04_10565 IPR012409 Sirohaem synthase PJW04_10565 IPR006367 Sirohaem synthase, N-terminal PJW04_10565 IPR036291 NAD(P)-binding domain superfamily PJW04_10565 IPR006366 Uroporphyrin-III C-methyltransferase PJW04_10565 IPR014776 Tetrapyrrole methylase, subdomain 2 PJW04_10565 IPR014777 Tetrapyrrole methylase, subdomain 1 PJW04_10565 IPR035996 Tetrapyrrole methylase superfamily PJW04_10565 IPR000878 Tetrapyrrole methylase PJW04_10570 IPR001789 Signal transduction response regulator, receiver domain PJW04_10570 IPR008327 Signal transduction response regulator, antiterminator PJW04_10570 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_10570 IPR005561 ANTAR domain PJW04_10570 IPR011006 CheY-like superfamily PJW04_10575 IPR006311 Twin-arginine translocation pathway, signal sequence PJW04_10580 IPR011701 Major facilitator superfamily PJW04_10580 IPR020846 Major facilitator superfamily domain PJW04_10580 IPR036259 MFS transporter superfamily PJW04_10580 IPR004737 Nitrate transporter PJW04_10585 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal PJW04_10585 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily PJW04_10585 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site PJW04_10585 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain PJW04_10585 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB PJW04_10585 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain PJW04_10585 IPR017121 Nitrite reductase [NAD(P)H], large subunit PJW04_10585 IPR023753 FAD/NAD(P)-binding domain PJW04_10585 IPR036188 FAD/NAD(P)-binding domain superfamily PJW04_10585 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily PJW04_10585 IPR007419 BFD-like [2Fe-2S]-binding domain PJW04_10585 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily PJW04_10590 IPR021028 Homotrimeric ring hydroxylase, catalytic domain PJW04_10590 IPR017941 Rieske [2Fe-2S] iron-sulphur domain PJW04_10590 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily PJW04_10595 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain PJW04_10595 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site PJW04_10595 IPR006656 Molybdopterin oxidoreductase PJW04_10595 IPR006657 Molybdopterin dinucleotide-binding domain PJW04_10595 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily PJW04_10595 IPR007419 BFD-like [2Fe-2S]-binding domain PJW04_10595 IPR009010 Aspartate decarboxylase-like domain superfamily PJW04_10595 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain PJW04_10600 IPR000878 Tetrapyrrole methylase PJW04_10600 IPR035996 Tetrapyrrole methylase superfamily PJW04_10600 IPR014777 Tetrapyrrole methylase, subdomain 1 PJW04_10600 IPR014776 Tetrapyrrole methylase, subdomain 2 PJW04_10600 IPR006366 Uroporphyrin-III C-methyltransferase PJW04_10600 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site PJW04_10610 IPR009078 Ferritin-like superfamily PJW04_10610 IPR012347 Ferritin-like PJW04_10610 IPR010287 Domain of unknown function DUF892 PJW04_10625 IPR001633 EAL domain PJW04_10625 IPR035919 EAL domain superfamily PJW04_10625 IPR000160 GGDEF domain PJW04_10625 IPR029787 Nucleotide cyclase PJW04_10625 IPR001610 PAC motif PJW04_10625 IPR000014 PAS domain PJW04_10625 IPR000700 PAS-associated, C-terminal PJW04_10625 IPR035965 PAS domain superfamily PJW04_10625 IPR013656 PAS fold-4 PJW04_10625 IPR013655 PAS fold-3 PJW04_10635 IPR011050 Pectin lyase fold/virulence factor PJW04_10635 IPR012332 P22 tailspike-like, C-terminal domain superfamily PJW04_10635 IPR006315 Outer membrane autotransporter barrel PJW04_10635 IPR036709 Autotransporter beta-domain superfamily PJW04_10635 IPR005546 Autotransporter beta-domain PJW04_10635 IPR013425 Autotransporter-associated beta strand repeat PJW04_10640 IPR011006 CheY-like superfamily PJW04_10640 IPR001789 Signal transduction response regulator, receiver domain PJW04_10640 IPR000792 Transcription regulator LuxR, C-terminal PJW04_10640 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_10645 IPR001610 PAC motif PJW04_10645 IPR001789 Signal transduction response regulator, receiver domain PJW04_10645 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW04_10645 IPR013656 PAS fold-4 PJW04_10645 IPR035965 PAS domain superfamily PJW04_10645 IPR000700 PAS-associated, C-terminal PJW04_10645 IPR000014 PAS domain PJW04_10645 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PJW04_10645 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PJW04_10645 IPR005467 Histidine kinase domain PJW04_10645 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_10645 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_10645 IPR011006 CheY-like superfamily PJW04_10650 IPR003423 Outer membrane efflux protein PJW04_10650 IPR010131 RND efflux system, outer membrane lipoprotein, NodT PJW04_10655 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PJW04_10655 IPR001036 Acriflavin resistance protein PJW04_10655 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA PJW04_10660 IPR006143 RND efflux pump, membrane fusion protein PJW04_10660 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PJW04_10665 IPR036709 Autotransporter beta-domain superfamily PJW04_10665 IPR036852 Peptidase S8/S53 domain superfamily PJW04_10665 IPR005546 Autotransporter beta-domain PJW04_10665 IPR023828 Peptidase S8, subtilisin, Ser-active site PJW04_10665 IPR000209 Peptidase S8/S53 domain PJW04_10665 IPR034061 Autotransporter serine protease peptidase domain PJW04_10665 IPR015500 Peptidase S8, subtilisin-related PJW04_10675 IPR003018 GAF domain PJW04_10675 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_10675 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_10675 IPR010559 Signal transduction histidine kinase, internal region PJW04_10675 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region PJW04_10680 IPR001789 Signal transduction response regulator, receiver domain PJW04_10680 IPR007492 LytTR DNA-binding domain PJW04_10680 IPR011006 CheY-like superfamily PJW04_10685 IPR001466 Beta-lactamase-related PJW04_10685 IPR012338 Beta-lactamase/transpeptidase-like PJW04_10695 IPR011042 Six-bladed beta-propeller, TolB-like PJW04_10695 IPR012938 Glucose/Sorbosone dehydrogenase PJW04_10695 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase PJW04_10700 IPR036291 NAD(P)-binding domain superfamily PJW04_10700 IPR000683 Oxidoreductase, N-terminal PJW04_10720 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 PJW04_10725 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath PJW04_10730 IPR008514 Type VI secretion system effector, Hcp PJW04_10730 IPR036624 Hcp1-like superfamily PJW04_10735 IPR009211 Predicted virulence protein, SciE type PJW04_10735 IPR011990 Tetratricopeptide-like helical domain superfamily PJW04_10740 IPR007048 IraD/Gp25-like PJW04_10740 IPR017737 Type VI secretion system-related protein PJW04_10745 IPR010272 Type VI secretion system, TssF-like PJW04_10755 IPR001270 ClpA/B family PJW04_10755 IPR004176 Clp, N-terminal PJW04_10755 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_10755 IPR018368 ClpA/B, conserved site 1 PJW04_10755 IPR041546 ClpA/ClpB, AAA lid domain PJW04_10755 IPR017729 Type VI secretion system, ATPase ClpV1 PJW04_10755 IPR019489 Clp ATPase, C-terminal PJW04_10755 IPR036628 Clp, N-terminal domain superfamily PJW04_10755 IPR003959 ATPase, AAA-type, core PJW04_10755 IPR003593 AAA+ ATPase domain PJW04_10785 IPR037026 Vgr protein, OB-fold domain superfamily PJW04_10785 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset PJW04_10785 IPR010609 Gp5, C-terminal PJW04_10785 IPR006531 Gp5 N-terminal PJW04_10785 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein PJW04_10800 IPR010263 Type VI secretion protein, VC_A0114 PJW04_10810 IPR010623 Type VI secretion system IcmF, C-terminal PJW04_10810 IPR017731 Type VI secretion system, IcmF PJW04_10810 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_10810 IPR025743 IcmF-related, N-terminal domain PJW04_10810 IPR009612 IcmF-related PJW04_10820 IPR015655 Protein phosphatase 2C family PJW04_10820 IPR036457 PPM-type phosphatase domain superfamily PJW04_10820 IPR001932 PPM-type phosphatase domain PJW04_10825 IPR011009 Protein kinase-like domain superfamily PJW04_10825 IPR000719 Protein kinase domain PJW04_10825 IPR008271 Serine/threonine-protein kinase, active site PJW04_10840 IPR010657 ImpA, N-terminal PJW04_10840 IPR017740 Type VI secretion system-associated, ImpA PJW04_10845 IPR036390 Winged helix DNA-binding domain superfamily PJW04_10845 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_10845 IPR037416 Nodulation protein D, PBP2 PJW04_10845 IPR000847 Transcription regulator HTH, LysR PJW04_10845 IPR005119 LysR, substrate-binding PJW04_10850 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_10850 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_10850 IPR005467 Histidine kinase domain PJW04_10850 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PJW04_10850 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PJW04_10850 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW04_10850 IPR001789 Signal transduction response regulator, receiver domain PJW04_10855 IPR036909 Cytochrome c-like domain superfamily PJW04_10855 IPR009056 Cytochrome c-like domain PJW04_10855 IPR004852 Di-haem cytochrome c peroxidase PJW04_10855 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase PJW04_10860 IPR001789 Signal transduction response regulator, receiver domain PJW04_10860 IPR016032 Signal transduction response regulator, C-terminal effector PJW04_10860 IPR001867 OmpR/PhoB-type DNA-binding domain PJW04_10860 IPR011006 CheY-like superfamily PJW04_10860 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_10860 IPR039420 Transcriptional regulatory protein WalR-like PJW04_10870 IPR027424 Glucose Oxidase, domain 2 PJW04_10870 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal PJW04_10870 IPR036188 FAD/NAD(P)-binding domain superfamily PJW04_10870 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal PJW04_10870 IPR012132 Glucose-methanol-choline oxidoreductase PJW04_10875 IPR017972 Cytochrome P450, conserved site PJW04_10875 IPR036396 Cytochrome P450 superfamily PJW04_10875 IPR001128 Cytochrome P450 PJW04_10875 IPR002397 Cytochrome P450, B-class PJW04_10880 IPR011006 CheY-like superfamily PJW04_10880 IPR001789 Signal transduction response regulator, receiver domain PJW04_10880 IPR000792 Transcription regulator LuxR, C-terminal PJW04_10880 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_10885 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_10885 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_10885 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain PJW04_10890 IPR000792 Transcription regulator LuxR, C-terminal PJW04_10890 IPR011006 CheY-like superfamily PJW04_10890 IPR001789 Signal transduction response regulator, receiver domain PJW04_10890 IPR016032 Signal transduction response regulator, C-terminal effector PJW04_10900 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain PJW04_10900 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_10900 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_10900 IPR003018 GAF domain PJW04_10900 IPR029016 GAF-like domain superfamily PJW04_10905 IPR025296 Domain of unknown function DUF4158 PJW04_10905 IPR002513 Tn3 transposase DDE domain PJW04_10915 IPR009061 Putative DNA-binding domain superfamily PJW04_10915 IPR011794 Hg(II)-responsive transcriptional regulator PJW04_10915 IPR000551 MerR-type HTH domain PJW04_10935 IPR006143 RND efflux pump, membrane fusion protein PJW04_10935 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PJW04_10935 IPR005695 Cobalt/zinc/cadmium resistance protein CzcB PJW04_10940 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PJW04_10940 IPR001036 Acriflavin resistance protein PJW04_10940 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA PJW04_10955 IPR041685 AAA domain, group 15 PJW04_10955 IPR001238 DNA-binding, RecF PJW04_10955 IPR018078 DNA-binding, RecF, conserved site PJW04_10955 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_10955 IPR042174 DNA-binding RecF, domain 2 PJW04_10980 IPR002355 Multicopper oxidase, copper-binding site PJW04_10980 IPR033138 Multicopper oxidases, conserved site PJW04_10980 IPR008972 Cupredoxin PJW04_10980 IPR011707 Multicopper oxidase, type 3 PJW04_10980 IPR034282 Copper resistance protein CopA, second cupredoxin domain PJW04_10980 IPR011706 Multicopper oxidase, type 2 PJW04_10980 IPR001117 Multicopper oxidase, type 1 PJW04_10980 IPR034284 Copper resistance protein, first cupredoxin domain PJW04_10980 IPR034279 Copper resistance protein, third cupredoxin domain PJW04_10980 IPR006311 Twin-arginine translocation pathway, signal sequence PJW04_10980 IPR006376 Copper-resistance protein CopA PJW04_10980 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal PJW04_10985 IPR007939 Copper resistance B precursor PJW04_11000 IPR023299 P-type ATPase, cytoplasmic domain N PJW04_11000 IPR007029 YHS domain PJW04_11000 IPR011017 TRASH domain PJW04_11000 IPR012348 Ribonucleotide reductase-like PJW04_11000 IPR001757 P-type ATPase PJW04_11000 IPR023298 P-type ATPase, transmembrane domain superfamily PJW04_11000 IPR008250 P-type ATPase, A domain superfamily PJW04_11000 IPR036412 HAD-like superfamily PJW04_11000 IPR027256 P-type ATPase, subfamily IB PJW04_11000 IPR018303 P-type ATPase, phosphorylation site PJW04_11000 IPR023214 HAD superfamily PJW04_11000 IPR009078 Ferritin-like superfamily PJW04_11015 IPR005923 Formiminoglutamase PJW04_11015 IPR006035 Ureohydrolase PJW04_11015 IPR023696 Ureohydrolase domain superfamily PJW04_11020 IPR005921 Histidine ammonia-lyase PJW04_11020 IPR001106 Aromatic amino acid lyase PJW04_11020 IPR008948 L-Aspartase-like PJW04_11020 IPR022313 Phenylalanine/histidine ammonia-lyases, active site PJW04_11020 IPR024083 Fumarase/histidase, N-terminal PJW04_11025 IPR023636 Urocanase conserved site PJW04_11025 IPR023637 Urocanase PJW04_11025 IPR036190 Urocanase superfamily PJW04_11025 IPR035085 Urocanase, Rossmann-like domain PJW04_11025 IPR035400 Urocanase, N-terminal domain PJW04_11025 IPR038364 Urocanase, central domain superfamily PJW04_11025 IPR035401 Urocanase, C-terminal domain PJW04_11030 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily PJW04_11030 IPR010248 Histidine utilization repressor PJW04_11030 IPR011663 UbiC transcription regulator-associated PJW04_11030 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_11030 IPR036390 Winged helix DNA-binding domain superfamily PJW04_11030 IPR000524 Transcription regulator HTH, GntR PJW04_11040 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PJW04_11040 IPR010917 TonB-dependent receptor, conserved site PJW04_11040 IPR000531 TonB-dependent receptor-like, beta-barrel PJW04_11040 IPR037066 TonB-dependent receptor, plug domain superfamily PJW04_11040 IPR012910 TonB-dependent receptor, plug domain PJW04_11040 IPR010101 TonB-dependent vitamin B12 transporter BtuB PJW04_11040 IPR039426 Vitamin B12 transporter BtuB-like PJW04_11040 IPR010916 TonB box, conserved site PJW04_11050 IPR036010 2Fe-2S ferredoxin-like superfamily PJW04_11050 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain PJW04_11050 IPR012675 Beta-grasp domain superfamily PJW04_11050 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain PJW04_11050 IPR017927 FAD-binding domain, ferredoxin reductase-type PJW04_11050 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PJW04_11050 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F PJW04_11050 IPR001433 Oxidoreductase FAD/NAD(P)-binding PJW04_11050 IPR017938 Riboflavin synthase-like beta-barrel PJW04_11065 IPR010917 TonB-dependent receptor, conserved site PJW04_11065 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PJW04_11065 IPR037066 TonB-dependent receptor, plug domain superfamily PJW04_11065 IPR000531 TonB-dependent receptor-like, beta-barrel PJW04_11065 IPR012910 TonB-dependent receptor, plug domain PJW04_11065 IPR039426 Vitamin B12 transporter BtuB-like PJW04_11065 IPR010101 TonB-dependent vitamin B12 transporter BtuB PJW04_11065 IPR010916 TonB box, conserved site PJW04_11075 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PJW04_11075 IPR001036 Acriflavin resistance protein PJW04_11075 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA PJW04_11100 IPR001757 P-type ATPase PJW04_11100 IPR027256 P-type ATPase, subfamily IB PJW04_11100 IPR036163 Heavy metal-associated domain superfamily PJW04_11100 IPR006121 Heavy metal-associated domain, HMA PJW04_11100 IPR036412 HAD-like superfamily PJW04_11100 IPR023214 HAD superfamily PJW04_11100 IPR008250 P-type ATPase, A domain superfamily PJW04_11100 IPR023298 P-type ATPase, transmembrane domain superfamily PJW04_11100 IPR018303 P-type ATPase, phosphorylation site PJW04_11100 IPR023299 P-type ATPase, cytoplasmic domain N PJW04_11100 IPR017969 Heavy-metal-associated, conserved site PJW04_11105 IPR001757 P-type ATPase PJW04_11105 IPR027256 P-type ATPase, subfamily IB PJW04_11105 IPR036163 Heavy metal-associated domain superfamily PJW04_11105 IPR006121 Heavy metal-associated domain, HMA PJW04_11105 IPR006122 Heavy metal-associated domain, copper ion-binding PJW04_11105 IPR023299 P-type ATPase, cytoplasmic domain N PJW04_11105 IPR023214 HAD superfamily PJW04_11105 IPR017969 Heavy-metal-associated, conserved site PJW04_11105 IPR023298 P-type ATPase, transmembrane domain superfamily PJW04_11105 IPR018303 P-type ATPase, phosphorylation site PJW04_11105 IPR008250 P-type ATPase, A domain superfamily PJW04_11105 IPR036412 HAD-like superfamily PJW04_11110 IPR011789 Cu(I)-responsive transcriptional regulator PJW04_11110 IPR009061 Putative DNA-binding domain superfamily PJW04_11110 IPR000551 MerR-type HTH domain PJW04_11110 IPR015358 Transcription regulator MerR, DNA binding PJW04_11120 IPR036291 NAD(P)-binding domain superfamily PJW04_11120 IPR020843 Polyketide synthase, enoylreductase domain PJW04_11120 IPR013154 Alcohol dehydrogenase, N-terminal PJW04_11120 IPR013149 Alcohol dehydrogenase, C-terminal PJW04_11120 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site PJW04_11120 IPR011032 GroES-like superfamily PJW04_11190 IPR012340 Nucleic acid-binding, OB-fold PJW04_11190 IPR003512 Bacteriophage M13, G5P, DNA-binding PJW04_11230 IPR029058 Alpha/Beta hydrolase fold PJW04_11230 IPR013094 Alpha/beta hydrolase fold-3 PJW04_11235 IPR011991 ArsR-like helix-turn-helix domain PJW04_11235 IPR001845 HTH ArsR-type DNA-binding domain PJW04_11235 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_11235 IPR036390 Winged helix DNA-binding domain superfamily PJW04_11240 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PJW04_11240 IPR001279 Metallo-beta-lactamase PJW04_11245 IPR007272 Sulphur transport domain PJW04_11260 IPR002781 Transmembrane protein TauE-like PJW04_11265 IPR036291 NAD(P)-binding domain superfamily PJW04_11265 IPR020904 Short-chain dehydrogenase/reductase, conserved site PJW04_11265 IPR002347 Short-chain dehydrogenase/reductase SDR PJW04_11275 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW04_11275 IPR029058 Alpha/Beta hydrolase fold PJW04_11275 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC PJW04_11275 IPR013216 Methyltransferase type 11 PJW04_11275 IPR000073 Alpha/beta hydrolase fold-1 PJW04_11290 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase PJW04_11290 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related PJW04_11290 IPR004547 Glucosamine-6-phosphate isomerase PJW04_11290 IPR018321 Glucosamine-6-phosphate isomerase, conserved site PJW04_11290 IPR024078 Putative deacetylase LmbE-like domain superfamily PJW04_11290 IPR037171 NagB/RpiA transferase-like PJW04_11320 IPR006311 Twin-arginine translocation pathway, signal sequence PJW04_11320 IPR000639 Epoxide hydrolase-like PJW04_11320 IPR010497 Epoxide hydrolase, N-terminal PJW04_11320 IPR029058 Alpha/Beta hydrolase fold PJW04_11320 IPR016292 Epoxide hydrolase PJW04_11330 IPR001647 DNA-binding HTH domain, TetR-type PJW04_11330 IPR041646 IcaR, C-terminal PJW04_11330 IPR009057 Homeobox-like domain superfamily PJW04_11335 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PJW04_11335 IPR001036 Acriflavin resistance protein PJW04_11335 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 PJW04_11340 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PJW04_11340 IPR006143 RND efflux pump, membrane fusion protein PJW04_11345 IPR009057 Homeobox-like domain superfamily PJW04_11345 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PJW04_11355 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal PJW04_11355 IPR017726 Fe/S biogenesis protein NfuA PJW04_11355 IPR035903 HesB-like domain superfamily PJW04_11355 IPR034904 Fe-S cluster assembly domain superfamily PJW04_11360 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily PJW04_11360 IPR001533 Pterin 4 alpha carbinolamine dehydratase PJW04_11370 IPR003689 Zinc/iron permease PJW04_11370 IPR023498 Zinc transporter ZupT PJW04_11375 IPR021728 Protein of unknown function DUF3300 PJW04_11380 IPR002942 RNA-binding S4 domain PJW04_11380 IPR006145 Pseudouridine synthase, RsuA/RluA PJW04_11380 IPR036986 RNA-binding S4 domain superfamily PJW04_11380 IPR006225 Pseudouridine synthase, RluC/RluD PJW04_11380 IPR020103 Pseudouridine synthase, catalytic domain superfamily PJW04_11380 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site PJW04_11385 IPR003029 S1 domain PJW04_11385 IPR022967 RNA-binding domain, S1 PJW04_11385 IPR004659 Ribonuclease E/G PJW04_11385 IPR028878 Ribonuclease E PJW04_11385 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G PJW04_11385 IPR021968 Polyribonucleotide phosphorylase C-terminal PJW04_11385 IPR012340 Nucleic acid-binding, OB-fold PJW04_11390 IPR011006 CheY-like superfamily PJW04_11390 IPR001789 Signal transduction response regulator, receiver domain PJW04_11390 IPR000792 Transcription regulator LuxR, C-terminal PJW04_11390 IPR016032 Signal transduction response regulator, C-terminal effector PJW04_11395 IPR001763 Rhodanese-like domain PJW04_11395 IPR036873 Rhodanese-like domain superfamily PJW04_11395 IPR020936 Uncharacterised protein family UPF0176 PJW04_11395 IPR040503 UPF0176, acylphosphatase-like domain PJW04_11405 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain PJW04_11415 IPR036291 NAD(P)-binding domain superfamily PJW04_11415 IPR017476 UDP-glucose/GDP-mannose dehydrogenase PJW04_11415 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily PJW04_11415 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily PJW04_11415 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation PJW04_11415 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal PJW04_11415 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase PJW04_11415 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal PJW04_11425 IPR011010 DNA breaking-rejoining enzyme, catalytic core PJW04_11425 IPR013762 Integrase-like, catalytic domain superfamily PJW04_11425 IPR002104 Integrase, catalytic domain PJW04_11425 IPR010998 Integrase/recombinase, N-terminal PJW04_11500 IPR000462 CDP-alcohol phosphatidyltransferase PJW04_11500 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial PJW04_11500 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase PJW04_11505 IPR038476 UvrC homology region 2 superfamily PJW04_11505 IPR001162 UvrC family homology region PJW04_11505 IPR004791 UvrABC system, subunit C PJW04_11505 IPR036876 UVR domain superfamily PJW04_11505 IPR001943 UVR domain PJW04_11505 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 PJW04_11505 IPR035901 GIY-YIG endonuclease superfamily PJW04_11505 IPR000305 GIY-YIG endonuclease PJW04_11505 IPR010994 RuvA domain 2-like PJW04_11515 IPR023485 Phosphotyrosine protein phosphatase I PJW04_11515 IPR036196 Phosphotyrosine protein phosphatase I superfamily PJW04_11515 IPR017867 Protein-tyrosine phosphatase, low molecular weight PJW04_11520 IPR029044 Nucleotide-diphospho-sugar transferases PJW04_11520 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase PJW04_11520 IPR003329 Acylneuraminate cytidylyltransferase PJW04_11525 IPR003758 Tetraacyldisaccharide 4'-kinase PJW04_11525 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_11530 IPR039421 Type I protein exporter PJW04_11530 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_11530 IPR011917 ABC transporter, lipid A export, MsbA PJW04_11530 IPR017871 ABC transporter, conserved site PJW04_11530 IPR003439 ABC transporter-like PJW04_11530 IPR003593 AAA+ ATPase domain PJW04_11530 IPR036640 ABC transporter type 1, transmembrane domain superfamily PJW04_11530 IPR011527 ABC transporter type 1, transmembrane domain PJW04_11540 IPR002898 MotA/TolQ/ExbB proton channel PJW04_11545 IPR035681 ComA-like, MBL domain PJW04_11545 IPR004477 ComEC/Rec2-related protein PJW04_11545 IPR004797 Competence protein ComEC/Rec2 PJW04_11545 IPR001279 Metallo-beta-lactamase PJW04_11545 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PJW04_11555 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_11555 IPR015854 ABC transporter, lipoprotein release, LolD PJW04_11555 IPR003439 ABC transporter-like PJW04_11555 IPR003593 AAA+ ATPase domain PJW04_11555 IPR011924 Lipoprotein releasing system, ATP-binding protein PJW04_11560 IPR003838 ABC transporter permease protein domain PJW04_11560 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E PJW04_11560 IPR025857 MacB-like periplasmic core domain PJW04_11570 IPR036714 Flavinator of succinate dehydrogenase superfamily PJW04_11570 IPR005631 Flavinator of succinate dehydrogenase PJW04_11575 IPR036010 2Fe-2S ferredoxin-like superfamily PJW04_11575 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein PJW04_11575 IPR009051 Alpha-helical ferredoxin PJW04_11575 IPR012675 Beta-grasp domain superfamily PJW04_11575 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal PJW04_11575 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PJW04_11575 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site PJW04_11575 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain PJW04_11575 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PJW04_11585 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain PJW04_11585 IPR036188 FAD/NAD(P)-binding domain superfamily PJW04_11585 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site PJW04_11585 IPR011281 Succinate dehydrogenase, flavoprotein subunit PJW04_11585 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal PJW04_11585 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily PJW04_11585 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit PJW04_11585 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily PJW04_11590 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor PJW04_11590 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit PJW04_11590 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit PJW04_11595 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit PJW04_11595 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site PJW04_11595 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit PJW04_11595 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit PJW04_11605 IPR006222 Aminomethyltransferase, folate-binding domain PJW04_11605 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal PJW04_11605 IPR023758 tRNA-modifying protein YgfZ PJW04_11605 IPR017703 YgfZ/GcvT conserved site PJW04_11610 IPR017922 sn-Glycerol-3-phosphate import ATP-binding protein UgpC PJW04_11610 IPR040582 MalK, OB fold domain PJW04_11610 IPR008995 Molybdate/tungstate binding, C-terminal PJW04_11610 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_11610 IPR003439 ABC transporter-like PJW04_11610 IPR003593 AAA+ ATPase domain PJW04_11610 IPR017871 ABC transporter, conserved site PJW04_11615 IPR001282 Glucose-6-phosphate dehydrogenase PJW04_11615 IPR019796 Glucose-6-phosphate dehydrogenase, active site PJW04_11615 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal PJW04_11615 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding PJW04_11615 IPR036291 NAD(P)-binding domain superfamily PJW04_11620 IPR003836 Glucokinase PJW04_11625 IPR039104 6-Phosphogluconolactonase PJW04_11625 IPR037171 NagB/RpiA transferase-like PJW04_11625 IPR005900 6-phosphogluconolactonase, DevB-type PJW04_11625 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase PJW04_11630 IPR037237 IlvD/EDD, N-terminal domain PJW04_11630 IPR004786 6-phosphogluconate dehydratase PJW04_11630 IPR042096 Dihydroxy-acid dehydratase, C-terminal PJW04_11630 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase PJW04_11630 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site PJW04_11635 IPR031337 KDPG/KHG aldolase, active site 1 PJW04_11635 IPR031338 KDPG/KHG aldolase, active site 2 PJW04_11635 IPR000887 KDPG/KHG aldolase PJW04_11635 IPR013785 Aldolase-type TIM barrel PJW04_11640 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PJW04_11640 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 PJW04_11640 IPR001036 Acriflavin resistance protein PJW04_11645 IPR001036 Acriflavin resistance protein PJW04_11645 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PJW04_11650 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PJW04_11650 IPR006143 RND efflux pump, membrane fusion protein PJW04_11660 IPR009056 Cytochrome c-like domain PJW04_11660 IPR036909 Cytochrome c-like domain superfamily PJW04_11700 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PJW04_11700 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PJW04_11700 IPR035965 PAS domain superfamily PJW04_11700 IPR029151 Periplasmic sensor-like domain superfamily PJW04_11700 IPR005467 Histidine kinase domain PJW04_11700 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_11700 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_11700 IPR011006 CheY-like superfamily PJW04_11700 IPR015387 LuxQ, periplasmic PJW04_11700 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW04_11700 IPR001789 Signal transduction response regulator, receiver domain PJW04_11705 IPR023323 Tex-like domain superfamily PJW04_11705 IPR041692 HHH domain 9 PJW04_11705 IPR012340 Nucleic acid-binding, OB-fold PJW04_11705 IPR012337 Ribonuclease H-like superfamily PJW04_11705 IPR010994 RuvA domain 2-like PJW04_11705 IPR022967 RNA-binding domain, S1 PJW04_11705 IPR003029 S1 domain PJW04_11705 IPR023319 Tex-like protein, HTH domain superfamily PJW04_11705 IPR037027 YqgF/RNase H-like domain superfamily PJW04_11705 IPR006641 YqgF/RNase H-like domain PJW04_11705 IPR032639 Tex protein, YqgF-like domain PJW04_11705 IPR018974 Tex-like protein, N-terminal PJW04_11715 IPR017941 Rieske [2Fe-2S] iron-sulphur domain PJW04_11715 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily PJW04_11715 IPR005805 Rieske iron-sulphur protein, C-terminal PJW04_11715 IPR038010 YhfW, C-terminal Rieske domain PJW04_11715 IPR006076 FAD dependent oxidoreductase PJW04_11715 IPR036188 FAD/NAD(P)-binding domain superfamily PJW04_11730 IPR000073 Alpha/beta hydrolase fold-1 PJW04_11730 IPR010125 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit PJW04_11730 IPR029058 Alpha/Beta hydrolase fold PJW04_11740 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase PJW04_11740 IPR000462 CDP-alcohol phosphatidyltransferase PJW04_11745 IPR011294 3-hydroxybutyrate dehydrogenase PJW04_11745 IPR036291 NAD(P)-binding domain superfamily PJW04_11745 IPR020904 Short-chain dehydrogenase/reductase, conserved site PJW04_11745 IPR002347 Short-chain dehydrogenase/reductase SDR PJW04_11760 IPR005177 Bifunctional kinase-pyrophosphorylase PJW04_11760 IPR026530 Phosphoenolpyruvate synthase regulatory protein PJW04_11765 IPR040442 Pyruvate kinase-like domain superfamily PJW04_11765 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily PJW04_11765 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding PJW04_11765 IPR036637 Phosphohistidine domain superfamily PJW04_11765 IPR008279 PEP-utilising enzyme, mobile domain PJW04_11765 IPR018274 PEP-utilising enzyme, active site PJW04_11765 IPR006319 Phosphoenolpyruvate synthase PJW04_11765 IPR013815 ATP-grasp fold, subdomain 1 PJW04_11765 IPR023151 PEP-utilising enzyme, conserved site PJW04_11765 IPR000121 PEP-utilising enzyme, C-terminal PJW04_11770 IPR008910 Conserved TM helix PJW04_11770 IPR006685 Mechanosensitive ion channel MscS PJW04_11770 IPR023408 Mechanosensitive ion channel MscS domain superfamily PJW04_11770 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 PJW04_11770 IPR006686 Mechanosensitive ion channel MscS, conserved site PJW04_11770 IPR011066 Mechanosensitive ion channel MscS, C-terminal PJW04_11770 IPR010920 LSM domain superfamily PJW04_11775 IPR013520 Exonuclease, RNase T/DNA polymerase III PJW04_11775 IPR022894 Oligoribonuclease PJW04_11775 IPR012337 Ribonuclease H-like superfamily PJW04_11775 IPR036397 Ribonuclease H superfamily PJW04_11780 IPR002125 Cytidine and deoxycytidylate deaminase domain PJW04_11780 IPR028883 tRNA-specific adenosine deaminase PJW04_11780 IPR016193 Cytidine deaminase-like PJW04_11780 IPR016192 APOBEC/CMP deaminase, zinc-binding PJW04_11785 IPR001367 Iron dependent repressor, metal binding and dimerisation domain PJW04_11785 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily PJW04_11785 IPR022687 DTXR-type HTH domain PJW04_11785 IPR022689 Iron dependent repressor PJW04_11785 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_11785 IPR036390 Winged helix DNA-binding domain superfamily PJW04_11790 IPR001046 NRAMP family PJW04_11795 IPR000073 Alpha/beta hydrolase fold-1 PJW04_11795 IPR000639 Epoxide hydrolase-like PJW04_11795 IPR029058 Alpha/Beta hydrolase fold PJW04_11810 IPR020846 Major facilitator superfamily domain PJW04_11810 IPR036259 MFS transporter superfamily PJW04_11810 IPR010290 Transmembrane secretion effector PJW04_11815 IPR013108 Amidohydrolase 3 PJW04_11815 IPR032466 Metal-dependent hydrolase PJW04_11815 IPR011059 Metal-dependent hydrolase, composite domain superfamily PJW04_11825 IPR036380 Isochorismatase-like superfamily PJW04_11825 IPR000868 Isochorismatase-like PJW04_11835 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_11835 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain PJW04_11835 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_11840 IPR011006 CheY-like superfamily PJW04_11840 IPR000792 Transcription regulator LuxR, C-terminal PJW04_11840 IPR016032 Signal transduction response regulator, C-terminal effector PJW04_11840 IPR001789 Signal transduction response regulator, receiver domain PJW04_11855 IPR036390 Winged helix DNA-binding domain superfamily PJW04_11855 IPR005119 LysR, substrate-binding PJW04_11855 IPR000847 Transcription regulator HTH, LysR PJW04_11855 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_11860 IPR018383 Uncharacterised protein family UPF0324, prokaryote PJW04_11860 IPR004630 Uncharacterised protein family UPF0324, bacteria PJW04_11870 IPR036396 Cytochrome P450 superfamily PJW04_11870 IPR017972 Cytochrome P450, conserved site PJW04_11870 IPR002397 Cytochrome P450, B-class PJW04_11870 IPR001128 Cytochrome P450 PJW04_11875 IPR018298 Adrenodoxin, iron-sulphur binding site PJW04_11875 IPR012675 Beta-grasp domain superfamily PJW04_11875 IPR036010 2Fe-2S ferredoxin-like superfamily PJW04_11875 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain PJW04_11875 IPR001055 Adrenodoxin PJW04_11880 IPR036188 FAD/NAD(P)-binding domain superfamily PJW04_11880 IPR023753 FAD/NAD(P)-binding domain PJW04_11880 IPR028202 Reductase, C-terminal PJW04_11880 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily PJW04_11885 IPR037403 HTH-type transcriptional regulator CynR, PBP2 domain PJW04_11885 IPR005119 LysR, substrate-binding PJW04_11885 IPR036390 Winged helix DNA-binding domain superfamily PJW04_11885 IPR000847 Transcription regulator HTH, LysR PJW04_11885 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_11890 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup PJW04_11890 IPR002128 NADH:ubiquinone/plastoquinone oxidoreductase, chloroplast chain 5, C-terminal PJW04_11890 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 PJW04_11890 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit PJW04_11890 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal PJW04_11895 IPR018752 Uncharacterised protein family UPF0753 PJW04_11900 IPR036812 NADP-dependent oxidoreductase domain superfamily PJW04_11900 IPR023210 NADP-dependent oxidoreductase domain PJW04_11905 IPR036812 NADP-dependent oxidoreductase domain superfamily PJW04_11905 IPR020471 Aldo/keto reductase PJW04_11905 IPR023210 NADP-dependent oxidoreductase domain PJW04_11910 IPR005119 LysR, substrate-binding PJW04_11910 IPR000847 Transcription regulator HTH, LysR PJW04_11910 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_11910 IPR036390 Winged helix DNA-binding domain superfamily PJW04_11920 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase PJW04_11920 IPR036291 NAD(P)-binding domain superfamily PJW04_11920 IPR020904 Short-chain dehydrogenase/reductase, conserved site PJW04_11920 IPR002347 Short-chain dehydrogenase/reductase SDR PJW04_11925 IPR000182 GNAT domain PJW04_11925 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PJW04_11925 IPR025777 GMP synthetase ATP pyrophosphatase domain PJW04_11925 IPR001674 GMP synthase, C-terminal PJW04_11925 IPR017926 Glutamine amidotransferase PJW04_11925 IPR005019 Methyladenine glycosylase PJW04_11925 IPR029062 Class I glutamine amidotransferase-like PJW04_11925 IPR016181 Acyl-CoA N-acyltransferase PJW04_11925 IPR011257 DNA glycosylase PJW04_11940 IPR006118 Recombinase, conserved site PJW04_11940 IPR006119 Resolvase, N-terminal catalytic domain PJW04_11940 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily PJW04_11940 IPR006120 Resolvase, HTH domain PJW04_11960 IPR005122 Uracil-DNA glycosylase-like PJW04_11960 IPR036895 Uracil-DNA glycosylase-like domain superfamily PJW04_11965 IPR005122 Uracil-DNA glycosylase-like PJW04_11965 IPR036895 Uracil-DNA glycosylase-like domain superfamily PJW04_11970 IPR005119 LysR, substrate-binding PJW04_11970 IPR000847 Transcription regulator HTH, LysR PJW04_11970 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_11970 IPR036390 Winged helix DNA-binding domain superfamily PJW04_11980 IPR032874 DDE domain PJW04_11980 IPR001584 Integrase, catalytic core PJW04_11980 IPR012337 Ribonuclease H-like superfamily PJW04_11980 IPR036397 Ribonuclease H superfamily PJW04_11995 IPR001584 Integrase, catalytic core PJW04_11995 IPR012337 Ribonuclease H-like superfamily PJW04_11995 IPR036397 Ribonuclease H superfamily PJW04_11995 IPR032874 DDE domain PJW04_12015 IPR036196 Phosphotyrosine protein phosphatase I superfamily PJW04_12015 IPR023485 Phosphotyrosine protein phosphatase I PJW04_12015 IPR014064 Arsenate reductase ArsC PJW04_12020 IPR038770 Sodium/solute symporter superfamily PJW04_12020 IPR004706 Arsenical-resistance protein Acr3 PJW04_12020 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 PJW04_12025 IPR039052 Antitoxin PemI-like PJW04_12025 IPR007159 SpoVT-AbrB domain PJW04_12025 IPR037914 SpoVT-AbrB domain superfamily PJW04_12060 IPR035225 Protein of unknown function DUF5338 PJW04_12070 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_12070 IPR038724 Regulatory protein RepA PJW04_12090 IPR011010 DNA breaking-rejoining enzyme, catalytic core PJW04_12090 IPR013762 Integrase-like, catalytic domain superfamily PJW04_12090 IPR002104 Integrase, catalytic domain PJW04_12090 IPR025166 Integrase, DNA-binding domain PJW04_12090 IPR010998 Integrase/recombinase, N-terminal PJW04_12090 IPR038488 Integrase, DNA-binding domain superfamily PJW04_12095 IPR029062 Class I glutamine amidotransferase-like PJW04_12095 IPR017926 Glutamine amidotransferase PJW04_12095 IPR001674 GMP synthase, C-terminal PJW04_12095 IPR022955 GMP synthase PJW04_12095 IPR025777 GMP synthetase ATP pyrophosphatase domain PJW04_12095 IPR022310 NAD/GMP synthase PJW04_12095 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PJW04_12095 IPR004739 GMP synthase, glutamine amidotransferase PJW04_12100 IPR000644 CBS domain PJW04_12100 IPR013785 Aldolase-type TIM barrel PJW04_12100 IPR001093 IMP dehydrogenase/GMP reductase PJW04_12100 IPR015875 IMP dehydrogenase / GMP reductase, conserved site PJW04_12100 IPR005990 Inosine-5'-monophosphate dehydrogenase PJW04_12105 IPR036291 NAD(P)-binding domain superfamily PJW04_12105 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase PJW04_12105 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain PJW04_12105 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site PJW04_12105 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain PJW04_12115 IPR003148 Regulator of K+ conductance, N-terminal PJW04_12115 IPR036291 NAD(P)-binding domain superfamily PJW04_12115 IPR038770 Sodium/solute symporter superfamily PJW04_12115 IPR006153 Cation/H+ exchanger PJW04_12115 IPR004771 K+/H+ exchanger PJW04_12120 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type PJW04_12120 IPR005835 Nucleotidyl transferase domain PJW04_12120 IPR029044 Nucleotide-diphospho-sugar transferases PJW04_12125 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW04_12125 IPR036291 NAD(P)-binding domain superfamily PJW04_12125 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain PJW04_12130 IPR000715 Glycosyl transferase, family 4 PJW04_12135 IPR019734 Tetratricopeptide repeat PJW04_12135 IPR041166 LapB, rubredoxin metal binding domain PJW04_12135 IPR011990 Tetratricopeptide-like helical domain superfamily PJW04_12135 IPR030865 Lipopolysaccharide assembly protein B PJW04_12135 IPR013026 Tetratricopeptide repeat-containing domain PJW04_12145 IPR020816 Histone-like DNA-binding protein, conserved site PJW04_12145 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily PJW04_12145 IPR005685 Integration host factor, beta subunit PJW04_12145 IPR000119 Histone-like DNA-binding protein PJW04_12150 IPR012340 Nucleic acid-binding, OB-fold PJW04_12150 IPR000110 Ribosomal protein S1 PJW04_12150 IPR022967 RNA-binding domain, S1 PJW04_12150 IPR003029 S1 domain PJW04_12155 IPR003136 Cytidylate kinase PJW04_12155 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_12155 IPR011994 Cytidylate kinase domain PJW04_12160 IPR035977 Ribosomal protein L36 superfamily PJW04_12160 IPR000473 Ribosomal protein L36 PJW04_12170 IPR017754 Agmatine deiminase PJW04_12170 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type PJW04_12175 IPR003010 Carbon-nitrogen hydrolase PJW04_12175 IPR036526 Carbon-nitrogen hydrolase superfamily PJW04_12175 IPR001110 Uncharacterised protein family UPF0012, conserved site PJW04_12180 IPR000182 GNAT domain PJW04_12180 IPR016181 Acyl-CoA N-acyltransferase PJW04_12200 IPR035906 MetI-like superfamily PJW04_12200 IPR000515 ABC transporter type 1, transmembrane domain MetI-like PJW04_12205 IPR035906 MetI-like superfamily PJW04_12205 IPR000515 ABC transporter type 1, transmembrane domain MetI-like PJW04_12225 IPR000843 LacI-type HTH domain PJW04_12225 IPR028082 Periplasmic binding protein-like I PJW04_12225 IPR010982 Lambda repressor-like, DNA-binding domain superfamily PJW04_12235 IPR005545 YCII-related PJW04_12235 IPR011008 Dimeric alpha-beta barrel PJW04_12240 IPR003768 Segregation and condensation protein A PJW04_12245 IPR005234 Chromosome segregation/condensation protein ScpB PJW04_12245 IPR036390 Winged helix DNA-binding domain superfamily PJW04_12245 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_12250 IPR006145 Pseudouridine synthase, RsuA/RluA PJW04_12250 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F PJW04_12250 IPR036986 RNA-binding S4 domain superfamily PJW04_12250 IPR002942 RNA-binding S4 domain PJW04_12250 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site PJW04_12250 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain PJW04_12250 IPR020103 Pseudouridine synthase, catalytic domain superfamily PJW04_12265 IPR003010 Carbon-nitrogen hydrolase PJW04_12265 IPR036526 Carbon-nitrogen hydrolase superfamily PJW04_12265 IPR001110 Uncharacterised protein family UPF0012, conserved site PJW04_12270 IPR004839 Aminotransferase, class I/classII PJW04_12270 IPR015424 Pyridoxal phosphate-dependent transferase PJW04_12270 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PJW04_12270 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PJW04_12275 IPR005895 ABC transporter, haem export, CcmA PJW04_12275 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_12275 IPR017871 ABC transporter, conserved site PJW04_12275 IPR003439 ABC transporter-like PJW04_12275 IPR003593 AAA+ ATPase domain PJW04_12280 IPR003544 Cytochrome c-type biogenesis protein CcmB PJW04_12280 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria PJW04_12285 IPR003557 Cytochrome c-type biogenesis protein CcmC PJW04_12285 IPR002541 Cytochrome c assembly protein PJW04_12295 IPR004329 CcmE/CycJ protein PJW04_12295 IPR036127 CcmE-like superfamily PJW04_12300 IPR003568 Cytochrome c-type biogenesis protein CcmF PJW04_12300 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal PJW04_12300 IPR002541 Cytochrome c assembly protein PJW04_12300 IPR003567 Cytochrome c-type biogenesis protein PJW04_12305 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE PJW04_12305 IPR013740 Redoxin PJW04_12305 IPR013766 Thioredoxin domain PJW04_12305 IPR017937 Thioredoxin, conserved site PJW04_12305 IPR036249 Thioredoxin-like superfamily PJW04_12310 IPR005616 CcmH/CycL/Ccl2/NrfF family PJW04_12310 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily PJW04_12315 IPR011990 Tetratricopeptide-like helical domain superfamily PJW04_12315 IPR013026 Tetratricopeptide repeat-containing domain PJW04_12315 IPR019734 Tetratricopeptide repeat PJW04_12315 IPR017560 Cytochrome c-type biogenesis protein CcmI PJW04_12320 IPR008220 Homoserine/serine acetyltransferase MetX-like PJW04_12320 IPR029058 Alpha/Beta hydrolase fold PJW04_12320 IPR000073 Alpha/beta hydrolase fold-1 PJW04_12325 IPR012156 Cold shock, CspA PJW04_12325 IPR011129 Cold shock domain PJW04_12325 IPR019844 Cold-shock (CSD) domain PJW04_12325 IPR002059 Cold-shock protein, DNA-binding PJW04_12325 IPR012340 Nucleic acid-binding, OB-fold PJW04_12330 IPR036640 ABC transporter type 1, transmembrane domain superfamily PJW04_12330 IPR011527 ABC transporter type 1, transmembrane domain PJW04_12330 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_12330 IPR003593 AAA+ ATPase domain PJW04_12330 IPR017871 ABC transporter, conserved site PJW04_12330 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC PJW04_12330 IPR003439 ABC transporter-like PJW04_12335 IPR011527 ABC transporter type 1, transmembrane domain PJW04_12335 IPR036640 ABC transporter type 1, transmembrane domain superfamily PJW04_12335 IPR039421 Type I protein exporter PJW04_12335 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_12335 IPR017871 ABC transporter, conserved site PJW04_12335 IPR003439 ABC transporter-like PJW04_12335 IPR003593 AAA+ ATPase domain PJW04_12335 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD PJW04_12340 IPR002585 Cytochrome ubiquinol oxidase subunit 1 PJW04_12345 IPR003317 Cytochrome ubiquinol oxidase subunit 2 PJW04_12365 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain PJW04_12365 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal PJW04_12365 IPR005674 CocE/Serine esterase PJW04_12365 IPR008979 Galactose-binding-like domain superfamily PJW04_12365 IPR029058 Alpha/Beta hydrolase fold PJW04_12375 IPR016161 Aldehyde/histidinol dehydrogenase PJW04_12375 IPR016163 Aldehyde dehydrogenase, C-terminal PJW04_12375 IPR016162 Aldehyde dehydrogenase, N-terminal PJW04_12375 IPR015590 Aldehyde dehydrogenase domain PJW04_12375 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site PJW04_12375 IPR012134 Glutamate-5-semialdehyde dehydrogenase PJW04_12375 IPR000965 GPR domain PJW04_12380 IPR036393 Acetylglutamate kinase-like superfamily PJW04_12380 IPR001048 Aspartate/glutamate/uridylate kinase PJW04_12380 IPR041739 Glutamate-5-kinase domain PJW04_12380 IPR001057 Glutamate/acetylglutamate kinase PJW04_12380 IPR011529 Glutamate 5-kinase PJW04_12380 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase PJW04_12380 IPR019797 Glutamate 5-kinase, conserved site PJW04_12380 IPR002478 PUA domain PJW04_12380 IPR015947 PUA-like superfamily PJW04_12380 IPR036974 PUA domain superfamily PJW04_12390 IPR008948 L-Aspartase-like PJW04_12390 IPR022761 Fumarate lyase, N-terminal PJW04_12390 IPR000362 Fumarate lyase family PJW04_12390 IPR009049 Argininosuccinate lyase PJW04_12390 IPR024083 Fumarase/histidase, N-terminal PJW04_12390 IPR020557 Fumarate lyase, conserved site PJW04_12395 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site PJW04_12395 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 PJW04_12395 IPR036291 NAD(P)-binding domain superfamily PJW04_12395 IPR000534 Semialdehyde dehydrogenase, NAD-binding PJW04_12405 IPR001048 Aspartate/glutamate/uridylate kinase PJW04_12405 IPR041734 N-Acetyl-L-glutamate kinase, fungal-type PJW04_12405 IPR011242 Acetylglutamate kinase ArgB, GNAT domain-containing PJW04_12405 IPR006855 Vertebrate-like NAGS Gcn5-related N-acetyltransferase (GNAT) domain PJW04_12405 IPR004662 Acetylglutamate kinase family PJW04_12405 IPR036393 Acetylglutamate kinase-like superfamily PJW04_12405 IPR016181 Acyl-CoA N-acyltransferase PJW04_12410 IPR010169 Acetylornithine deacetylase ArgE PJW04_12410 IPR036264 Bacterial exopeptidase dimerisation domain PJW04_12410 IPR002933 Peptidase M20 PJW04_12410 IPR011650 Peptidase M20, dimerisation domain PJW04_12420 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body PJW04_12420 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PJW04_12420 IPR023434 Argininosuccinate synthase, type 1 subfamily PJW04_12420 IPR001518 Argininosuccinate synthase PJW04_12420 IPR018223 Argininosuccinate synthase, conserved site PJW04_12425 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding PJW04_12425 IPR006130 Aspartate/ornithine carbamoyltransferase PJW04_12425 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily PJW04_12425 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain PJW04_12435 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PJW04_12435 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding PJW04_12435 IPR032678 tRNA synthetases class I, catalytic domain PJW04_12435 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase PJW04_12435 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR PJW04_12435 IPR015803 Cysteine-tRNA ligase PJW04_12440 IPR023939 Cysteine desulfuration protein SufE PJW04_12440 IPR003808 Fe-S metabolism associated domain, SufE-like PJW04_12450 IPR012784 RNA polymerase-binding transcription factor DksA PJW04_12450 IPR037187 DksA, N-terminal domain superfamily PJW04_12450 IPR000962 Zinc finger, DksA/TraR C4-type PJW04_12450 IPR020458 Zinc finger, DksA/TraR C4-type conserved site PJW04_12460 IPR002696 Putative membrane protein insertion efficiency factor PJW04_12465 IPR032466 Metal-dependent hydrolase PJW04_12465 IPR011059 Metal-dependent hydrolase, composite domain superfamily PJW04_12465 IPR004722 Dihydroorotase PJW04_12465 IPR006680 Amidohydrolase-related PJW04_12465 IPR002195 Dihydroorotase, conserved site PJW04_12470 IPR011055 Duplicated hybrid motif PJW04_12470 IPR016047 Peptidase M23 PJW04_12470 IPR003646 SH3-like domain, bacterial-type PJW04_12485 IPR013785 Aldolase-type TIM barrel PJW04_12485 IPR010628 Ethanolamine ammonia lyase large subunit PJW04_12490 IPR042251 Ethanolamine ammonia-lyase light chain, C-terminal PJW04_12490 IPR009246 Ethanolamine ammonia-lyase light chain PJW04_12490 IPR042255 Ethanolamine ammonia-lyase light chain, N-terminal PJW04_12500 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PJW04_12500 IPR001279 Metallo-beta-lactamase PJW04_12510 IPR012334 Pectin lyase fold PJW04_12510 IPR011050 Pectin lyase fold/virulence factor PJW04_12510 IPR033131 Pectinesterase, Asp active site PJW04_12510 IPR000070 Pectinesterase, catalytic PJW04_12520 IPR036412 HAD-like superfamily PJW04_12520 IPR006439 HAD hydrolase, subfamily IA PJW04_12520 IPR041492 Haloacid dehalogenase-like hydrolase PJW04_12520 IPR023214 HAD superfamily PJW04_12520 IPR023198 Phosphoglycolate phosphatase-like, domain 2 PJW04_12520 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic PJW04_12520 IPR037512 Phosphoglycolate phosphatase, prokaryotic PJW04_12525 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW04_12525 IPR010233 Ubiquinone biosynthesis O-methyltransferase PJW04_12530 IPR032466 Metal-dependent hydrolase PJW04_12530 IPR011059 Metal-dependent hydrolase, composite domain superfamily PJW04_12530 IPR023512 Deaminase MtaD/DadD PJW04_12530 IPR006680 Amidohydrolase-related PJW04_12540 IPR015365 Elongation factor P, C-terminal PJW04_12540 IPR012340 Nucleic acid-binding, OB-fold PJW04_12540 IPR014722 Ribosomal protein L2, domain 2 PJW04_12540 IPR020599 Translation elongation factor P/YeiP PJW04_12540 IPR013185 Translation elongation factor, KOW-like PJW04_12540 IPR001059 Translation elongation factor P/YeiP, central PJW04_12540 IPR013852 Translation elongation factor P/YeiP, conserved site PJW04_12540 IPR011768 Translation elongation factor P PJW04_12540 IPR008991 Translation protein SH3-like domain superfamily PJW04_12545 IPR013785 Aldolase-type TIM barrel PJW04_12545 IPR022462 Lysine-2,3-aminomutase-like PJW04_12545 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase PJW04_12545 IPR007197 Radical SAM PJW04_12550 IPR000014 PAS domain PJW04_12550 IPR000160 GGDEF domain PJW04_12550 IPR035965 PAS domain superfamily PJW04_12550 IPR029787 Nucleotide cyclase PJW04_12550 IPR001633 EAL domain PJW04_12550 IPR035919 EAL domain superfamily PJW04_12550 IPR005330 MHYT domain PJW04_12560 IPR029028 Alpha/beta knot methyltransferases PJW04_12560 IPR004384 RNA methyltransferase TrmJ/LasT PJW04_12560 IPR001537 tRNA/rRNA methyltransferase, SpoU type PJW04_12560 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PJW04_12565 IPR033942 Inositol monophosphatase PJW04_12565 IPR020583 Inositol monophosphatase, metal-binding site PJW04_12565 IPR000760 Inositol monophosphatase-like PJW04_12565 IPR020550 Inositol monophosphatase, conserved site PJW04_12565 IPR022337 Inositol monophosphatase, SuhB PJW04_12570 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily PJW04_12570 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily PJW04_12570 IPR019831 Manganese/iron superoxide dismutase, N-terminal PJW04_12570 IPR019832 Manganese/iron superoxide dismutase, C-terminal PJW04_12570 IPR001189 Manganese/iron superoxide dismutase PJW04_12570 IPR019833 Manganese/iron superoxide dismutase, binding site PJW04_12575 IPR000026 Guanine-specific ribonuclease N1/T1/U2 PJW04_12575 IPR016191 Ribonuclease/ribotoxin PJW04_12585 IPR003593 AAA+ ATPase domain PJW04_12585 IPR032524 ABC transporter Uup, C-terminal PJW04_12585 IPR032781 ABC-transporter extension domain PJW04_12585 IPR003439 ABC transporter-like PJW04_12585 IPR017871 ABC transporter, conserved site PJW04_12585 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_12585 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily PJW04_12590 IPR001650 Helicase, C-terminal PJW04_12590 IPR014001 Helicase superfamily 1/2, ATP-binding domain PJW04_12590 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily PJW04_12590 IPR011545 DEAD/DEAH box helicase domain PJW04_12590 IPR028619 ATP-dependent RNA helicase DbpA PJW04_12590 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_12590 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain PJW04_12590 IPR014014 RNA helicase, DEAD-box type, Q motif PJW04_12590 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site PJW04_12595 IPR005764 Adenine phosphoribosyl transferase PJW04_12595 IPR000836 Phosphoribosyltransferase domain PJW04_12595 IPR029057 Phosphoribosyltransferase-like PJW04_12600 IPR003846 Protein adenylyltransferase SelO PJW04_12605 IPR029058 Alpha/Beta hydrolase fold PJW04_12605 IPR002018 Carboxylesterase, type B PJW04_12605 IPR019826 Carboxylesterase type B, active site PJW04_12605 IPR019819 Carboxylesterase type B, conserved site PJW04_12610 IPR036249 Thioredoxin-like superfamily PJW04_12610 IPR034333 Glutathione S-transferases, class Zeta , N-terminal PJW04_12610 IPR034330 Glutathione S-transferases, class Zeta , C-terminal PJW04_12610 IPR005955 Glutathione S-transferases, class Zeta PJW04_12610 IPR010987 Glutathione S-transferase, C-terminal-like PJW04_12610 IPR004045 Glutathione S-transferase, N-terminal PJW04_12610 IPR040079 Glutathione Transferase family PJW04_12610 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PJW04_12610 IPR004046 Glutathione S-transferase, C-terminal PJW04_12615 IPR011129 Cold shock domain PJW04_12615 IPR019844 Cold-shock (CSD) domain PJW04_12615 IPR002059 Cold-shock protein, DNA-binding PJW04_12615 IPR012340 Nucleic acid-binding, OB-fold PJW04_12615 IPR012156 Cold shock, CspA PJW04_12620 IPR011335 Restriction endonuclease type II-like PJW04_12620 IPR038590 YaeQ superfamily PJW04_12620 IPR009822 YaeQ PJW04_12625 IPR036188 FAD/NAD(P)-binding domain superfamily PJW04_12625 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like PJW04_12625 IPR023166 HI0933-like insert domain superfamily PJW04_12630 IPR029787 Nucleotide cyclase PJW04_12630 IPR001789 Signal transduction response regulator, receiver domain PJW04_12630 IPR035919 EAL domain superfamily PJW04_12630 IPR001633 EAL domain PJW04_12630 IPR011006 CheY-like superfamily PJW04_12630 IPR000160 GGDEF domain PJW04_12635 IPR022919 Peptidase M48, protease HtpX, putative PJW04_12635 IPR001915 Peptidase M48 PJW04_12640 IPR022380 Glutamyl-Q tRNA(Asp) synthetase PJW04_12640 IPR000924 Glutamyl/glutaminyl-tRNA synthetase PJW04_12640 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain PJW04_12640 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PJW04_12645 IPR011283 Acetoacetyl-CoA reductase PJW04_12645 IPR036291 NAD(P)-binding domain superfamily PJW04_12645 IPR020904 Short-chain dehydrogenase/reductase, conserved site PJW04_12645 IPR002347 Short-chain dehydrogenase/reductase SDR PJW04_12650 IPR007897 PHB accumulation regulatory PJW04_12650 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR PJW04_12650 IPR012909 PHA accumulation regulator DNA-binding, N-terminal PJW04_12670 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PJW04_12670 IPR020568 Ribosomal protein S5 domain 2-type fold PJW04_12670 IPR037198 MutL, C-terminal domain superfamily PJW04_12670 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms PJW04_12670 IPR042120 MutL, C-terminal domain, dimerisation subdomain PJW04_12670 IPR014790 MutL, C-terminal, dimerisation PJW04_12670 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_12670 IPR013507 DNA mismatch repair protein, S5 domain 2-like PJW04_12670 IPR014762 DNA mismatch repair, conserved site PJW04_12670 IPR020667 DNA mismatch repair protein, MutL PJW04_12670 IPR002099 DNA mismatch repair protein family, N-terminal PJW04_12670 IPR042121 MutL, C-terminal domain, regulatory subdomain PJW04_12675 IPR021731 AMIN domain PJW04_12675 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain PJW04_12675 IPR006311 Twin-arginine translocation pathway, signal sequence PJW04_12680 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_12680 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE PJW04_12685 IPR004443 YjeF N-terminal domain PJW04_12685 IPR036652 YjeF N-terminal domain superfamily PJW04_12685 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase PJW04_12685 IPR017953 Carbohydrate kinase, predicted, conserved site PJW04_12685 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr PJW04_12685 IPR029056 Ribokinase-like PJW04_12690 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PJW04_12690 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PJW04_12690 IPR013542 Domain of unknown function DUF1730 PJW04_12690 IPR004453 Epoxyqueuosine reductase QueG PJW04_12695 IPR025824 OB-fold nucleic acid binding domain PJW04_12695 IPR020579 Exonuclease VII, large subunit, C-terminal PJW04_12695 IPR003753 Exonuclease VII, large subunit PJW04_12710 IPR042095 Sulfatase-modifying factor enzyme superfamily PJW04_12710 IPR016187 C-type lectin fold PJW04_12710 IPR005532 Sulfatase-modifying factor enzyme PJW04_12720 IPR002562 3'-5' exonuclease domain PJW04_12720 IPR012337 Ribonuclease H-like superfamily PJW04_12720 IPR006292 Ribonuclease D PJW04_12720 IPR002121 HRDC domain PJW04_12720 IPR010997 HRDC-like superfamily PJW04_12720 IPR036397 Ribonuclease H superfamily PJW04_12725 IPR012309 DNA ligase, ATP-dependent, C-terminal PJW04_12725 IPR012310 DNA ligase, ATP-dependent, central PJW04_12725 IPR014146 DNA ligase D, ligase domain PJW04_12725 IPR014144 DNA ligase D, 3'-phosphoesterase domain PJW04_12725 IPR012340 Nucleic acid-binding, OB-fold PJW04_12725 IPR014143 DNA ligase D PJW04_12725 IPR033651 LigD polymerase domain, PaeLigD-type PJW04_12725 IPR014145 DNA ligase D, polymerase domain PJW04_12755 IPR039315 Chemotaxis protein CheW PJW04_12755 IPR036061 CheW-like domain superfamily PJW04_12755 IPR002545 CheW-like domain PJW04_12760 IPR033479 Double Cache domain 1 PJW04_12760 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding PJW04_12760 IPR029151 Periplasmic sensor-like domain superfamily PJW04_12760 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PJW04_12760 IPR003660 HAMP domain PJW04_12765 IPR003180 Methylpurine-DNA glycosylase PJW04_12765 IPR036995 Methylpurine-DNA glycosylase superfamily PJW04_12765 IPR011034 Formyl transferase-like, C-terminal domain superfamily PJW04_12770 IPR011545 DEAD/DEAH box helicase domain PJW04_12770 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_12770 IPR001650 Helicase, C-terminal PJW04_12770 IPR014001 Helicase superfamily 1/2, ATP-binding domain PJW04_12770 IPR013701 DEAD/H associated PJW04_12770 IPR003593 AAA+ ATPase domain PJW04_12790 IPR036760 SspB-like superfamily PJW04_12790 IPR007481 Stringent starvation protein B PJW04_12795 IPR034341 Stringent starvation protein A, N-terminal PJW04_12795 IPR004046 Glutathione S-transferase, C-terminal PJW04_12795 IPR040079 Glutathione Transferase family PJW04_12795 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PJW04_12795 IPR010987 Glutathione S-transferase, C-terminal-like PJW04_12795 IPR004045 Glutathione S-transferase, N-terminal PJW04_12795 IPR036249 Thioredoxin-like superfamily PJW04_12800 IPR002326 Cytochrome c1 PJW04_12800 IPR036909 Cytochrome c-like domain superfamily PJW04_12800 IPR009056 Cytochrome c-like domain PJW04_12805 IPR036150 Cytochrome b/b6, C-terminal domain superfamily PJW04_12805 IPR005798 Cytochrome b/b6, C-terminal PJW04_12805 IPR005797 Cytochrome b/b6, N-terminal PJW04_12805 IPR027387 Cytochrome b/b6-like domain superfamily PJW04_12805 IPR030689 Cytochrome b PJW04_12805 IPR016174 Di-haem cytochrome, transmembrane PJW04_12810 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal PJW04_12810 IPR017941 Rieske [2Fe-2S] iron-sulphur domain PJW04_12810 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily PJW04_12810 IPR014349 Rieske iron-sulphur protein PJW04_12810 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit PJW04_12810 IPR005805 Rieske iron-sulphur protein, C-terminal PJW04_12815 IPR023346 Lysozyme-like domain superfamily PJW04_12815 IPR000189 Prokaryotic transglycosylase, active site PJW04_12815 IPR008258 Transglycosylase SLT domain 1 PJW04_12830 IPR023404 Radical SAM, alpha/beta horseshoe PJW04_12830 IPR007197 Radical SAM PJW04_12830 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB PJW04_12830 IPR038135 Methylthiotransferase, N-terminal domain superfamily PJW04_12830 IPR013848 Methylthiotransferase, N-terminal PJW04_12830 IPR020612 Methylthiotransferase, conserved site PJW04_12830 IPR005839 Methylthiotransferase PJW04_12830 IPR006638 Elp3/MiaB/NifB PJW04_12830 IPR002792 TRAM domain PJW04_12835 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_12835 IPR003714 PhoH-like protein PJW04_12845 IPR023091 Metalloprotease catalytic domain superfamily, predicted PJW04_12845 IPR002036 Endoribonuclease YbeY PJW04_12845 IPR020549 Endoribonuclease YbeY, conserved site PJW04_12855 IPR000644 CBS domain PJW04_12855 IPR036318 FAD-binding, type PCMH-like superfamily PJW04_12855 IPR016169 FAD-binding, type PCMH, subdomain 2 PJW04_12855 IPR005170 Transporter-associated domain PJW04_12870 IPR016162 Aldehyde dehydrogenase, N-terminal PJW04_12870 IPR015590 Aldehyde dehydrogenase domain PJW04_12870 IPR016161 Aldehyde/histidinol dehydrogenase PJW04_12870 IPR016163 Aldehyde dehydrogenase, C-terminal PJW04_12875 IPR000515 ABC transporter type 1, transmembrane domain MetI-like PJW04_12875 IPR035906 MetI-like superfamily PJW04_12880 IPR000515 ABC transporter type 1, transmembrane domain MetI-like PJW04_12880 IPR035906 MetI-like superfamily PJW04_12890 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit PJW04_12890 IPR003593 AAA+ ATPase domain PJW04_12890 IPR003439 ABC transporter-like PJW04_12890 IPR017871 ABC transporter, conserved site PJW04_12890 IPR008995 Molybdate/tungstate binding, C-terminal PJW04_12890 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_12890 IPR013611 Transport-associated OB, type 2 PJW04_12895 IPR003423 Outer membrane efflux protein PJW04_12895 IPR010131 RND efflux system, outer membrane lipoprotein, NodT PJW04_12900 IPR004638 Drug resistance transporter EmrB-like PJW04_12900 IPR011701 Major facilitator superfamily PJW04_12900 IPR020846 Major facilitator superfamily domain PJW04_12900 IPR036259 MFS transporter superfamily PJW04_12905 IPR039562 Membrane fusion protein, biotin-lipoyl like domain PJW04_12910 IPR006059 Bacterial extracellular solute-binding protein PJW04_12910 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein PJW04_12915 IPR005814 Aminotransferase class-III PJW04_12915 IPR015424 Pyridoxal phosphate-dependent transferase PJW04_12915 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PJW04_12915 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PJW04_12920 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain PJW04_12920 IPR008146 Glutamine synthetase, catalytic domain PJW04_12920 IPR036651 Glutamine synthetase, N-terminal domain superfamily PJW04_12925 IPR017926 Glutamine amidotransferase PJW04_12925 IPR011697 Peptidase C26 PJW04_12925 IPR029062 Class I glutamine amidotransferase-like PJW04_12930 IPR027303 Glutamine synthetase, glycine-rich site PJW04_12930 IPR036651 Glutamine synthetase, N-terminal domain superfamily PJW04_12930 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain PJW04_12930 IPR008146 Glutamine synthetase, catalytic domain PJW04_12935 IPR036188 FAD/NAD(P)-binding domain superfamily PJW04_12935 IPR006076 FAD dependent oxidoreductase PJW04_12940 IPR029787 Nucleotide cyclase PJW04_12940 IPR001789 Signal transduction response regulator, receiver domain PJW04_12940 IPR000160 GGDEF domain PJW04_12940 IPR011006 CheY-like superfamily PJW04_12945 IPR035938 Hemerythrin-like superfamily PJW04_12945 IPR012827 Haemerythrin, metal-binding domain PJW04_12945 IPR012312 Haemerythrin-like PJW04_12945 IPR023504 Bacteriohemerythrin-like protein PJW04_12945 IPR016131 Haemerythrin, iron-binding site PJW04_12950 IPR011701 Major facilitator superfamily PJW04_12950 IPR020846 Major facilitator superfamily domain PJW04_12950 IPR005828 Major facilitator, sugar transporter-like PJW04_12950 IPR005829 Sugar transporter, conserved site PJW04_12950 IPR036259 MFS transporter superfamily PJW04_12950 IPR004736 MFS transporter, metabolite:H symporter PJW04_12960 IPR009010 Aspartate decarboxylase-like domain superfamily PJW04_12960 IPR006656 Molybdopterin oxidoreductase PJW04_12960 IPR041953 YdeP, molybdopterin-binding oxidoreductase-like domain PJW04_12960 IPR010046 Oxidoreductase alpha (molybdopterin) subunit PJW04_12960 IPR037951 YdeP-like, MopB domain PJW04_12965 IPR003786 Sulfur carrier protein FdhD PJW04_12965 IPR016193 Cytidine deaminase-like PJW04_12970 IPR011701 Major facilitator superfamily PJW04_12970 IPR020846 Major facilitator superfamily domain PJW04_12970 IPR036259 MFS transporter superfamily PJW04_12975 IPR015424 Pyridoxal phosphate-dependent transferase PJW04_12975 IPR005814 Aminotransferase class-III PJW04_12975 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PJW04_12975 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PJW04_12985 IPR007383 Protein of unknown function DUF445 PJW04_12990 IPR001789 Signal transduction response regulator, receiver domain PJW04_12990 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain PJW04_12990 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW04_12990 IPR036641 HPT domain superfamily PJW04_12990 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_12990 IPR011006 CheY-like superfamily PJW04_12990 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_12990 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PJW04_12990 IPR005467 Histidine kinase domain PJW04_12990 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PJW04_12990 IPR003660 HAMP domain PJW04_12990 IPR019247 Histidine kinase BarA, N-terminal PJW04_12995 IPR011006 CheY-like superfamily PJW04_12995 IPR003607 HD/PDEase domain PJW04_12995 IPR001789 Signal transduction response regulator, receiver domain PJW04_12995 IPR037522 HD-GYP domain PJW04_13000 IPR004638 Drug resistance transporter EmrB-like PJW04_13000 IPR011701 Major facilitator superfamily PJW04_13000 IPR020846 Major facilitator superfamily domain PJW04_13000 IPR036259 MFS transporter superfamily PJW04_13005 IPR007780 NAD-glutamate dehydrogenase, bacteria PJW04_13005 IPR036291 NAD(P)-binding domain superfamily PJW04_13005 IPR028971 NAD-glutamate dehydrogenase PJW04_13015 IPR006143 RND efflux pump, membrane fusion protein PJW04_13015 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PJW04_13020 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PJW04_13020 IPR001036 Acriflavin resistance protein PJW04_13020 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 PJW04_13025 IPR000843 LacI-type HTH domain PJW04_13025 IPR012310 DNA ligase, ATP-dependent, central PJW04_13025 IPR028082 Periplasmic binding protein-like I PJW04_13025 IPR010982 Lambda repressor-like, DNA-binding domain superfamily PJW04_13030 IPR002114 Phosphotransferase system, HPr serine phosphorylation site PJW04_13030 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site PJW04_13030 IPR008731 Phosphotransferase system, enzyme I N-terminal PJW04_13030 IPR002178 PTS EIIA type-2 domain PJW04_13030 IPR006318 Phosphotransferase system, enzyme I-like PJW04_13030 IPR016152 Phosphotransferase/anion transporter PJW04_13030 IPR036637 Phosphohistidine domain superfamily PJW04_13030 IPR023151 PEP-utilising enzyme, conserved site PJW04_13030 IPR000121 PEP-utilising enzyme, C-terminal PJW04_13030 IPR018274 PEP-utilising enzyme, active site PJW04_13030 IPR008279 PEP-utilising enzyme, mobile domain PJW04_13030 IPR035895 HPr-like superfamily PJW04_13030 IPR040442 Pyruvate kinase-like domain superfamily PJW04_13030 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily PJW04_13030 IPR036618 PtsI, HPr-binding domain superfamily PJW04_13030 IPR000032 Phosphocarrier protein HPr-like PJW04_13035 IPR017583 Tagatose/fructose phosphokinase PJW04_13035 IPR029056 Ribokinase-like PJW04_13035 IPR011611 Carbohydrate kinase PfkB PJW04_13035 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site PJW04_13035 IPR022463 Fructose 1-phosphate kinase PJW04_13040 IPR003353 Phosphotransferase system, fructose-specific IIB subunit PJW04_13040 IPR013011 Phosphotransferase system, EIIB component, type 2 PJW04_13040 IPR036095 PTS system IIB component-like superfamily PJW04_13040 IPR006327 Phosphotransferase system, fructose IIC component PJW04_13040 IPR003501 Phosphotransferase system, EIIB component, type 2/3 PJW04_13040 IPR013014 Phosphotransferase system, EIIC component, type 2 PJW04_13100 IPR005665 Protein-export membrane protein SecF, bacterial PJW04_13100 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site PJW04_13100 IPR022645 Protein-export membrane protein SecD/SecF, bacterial PJW04_13100 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial PJW04_13105 IPR027398 SecD export protein N-terminal TM domain PJW04_13105 IPR022645 Protein-export membrane protein SecD/SecF, bacterial PJW04_13105 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site PJW04_13105 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial PJW04_13105 IPR005791 Protein translocase subunit SecD PJW04_13110 IPR003849 Preprotein translocase YajC PJW04_13115 IPR004803 tRNA-guanine transglycosylase PJW04_13115 IPR036511 Queuine tRNA-ribosyltransferase-like PJW04_13115 IPR002616 tRNA-guanine(15) transglycosylase-like PJW04_13120 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA PJW04_13120 IPR042119 QueA, domain 2 PJW04_13120 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily PJW04_13120 IPR042118 QueA, domain 1 PJW04_13155 IPR005765 Uracil phosphoribosyl transferase PJW04_13155 IPR034332 Uracil phosphoribosyltransferase, bacterial-type PJW04_13155 IPR029057 Phosphoribosyltransferase-like PJW04_13155 IPR000836 Phosphoribosyltransferase domain PJW04_13160 IPR014756 Immunoglobulin E-set PJW04_13160 IPR012341 Six-hairpin glycosidase-like superfamily PJW04_13160 IPR008928 Six-hairpin glycosidase superfamily PJW04_13160 IPR033126 Glycosyl hydrolases family 9, Asp/Glu active sites PJW04_13160 IPR018221 Glycoside hydrolase family 9, His active site PJW04_13160 IPR013783 Immunoglobulin-like fold PJW04_13160 IPR004197 Cellulase, Ig-like domain PJW04_13160 IPR001701 Glycoside hydrolase family 9 PJW04_13165 IPR029055 Nucleophile aminohydrolases, N-terminal PJW04_13165 IPR000101 Gamma-glutamyltranspeptidase PJW04_13170 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PJW04_13170 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PJW04_13185 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PJW04_13185 IPR001980 Phosphopantetheine adenylyltransferase PJW04_13185 IPR004821 Cytidyltransferase-like domain PJW04_13190 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW04_13190 IPR004398 RNA methyltransferase, RsmD PJW04_13190 IPR002052 DNA methylase, N-6 adenine-specific, conserved site PJW04_13195 IPR019805 Heat shock protein Hsp90, conserved site PJW04_13195 IPR001404 Heat shock protein Hsp90 family PJW04_13195 IPR020575 Heat shock protein Hsp90, N-terminal PJW04_13195 IPR020568 Ribosomal protein S5 domain 2-type fold PJW04_13195 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_13195 IPR037196 HSP90, C-terminal domain PJW04_13195 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_13215 IPR010917 TonB-dependent receptor, conserved site PJW04_13215 IPR010101 TonB-dependent vitamin B12 transporter BtuB PJW04_13215 IPR039426 Vitamin B12 transporter BtuB-like PJW04_13215 IPR012910 TonB-dependent receptor, plug domain PJW04_13215 IPR000531 TonB-dependent receptor-like, beta-barrel PJW04_13215 IPR010916 TonB box, conserved site PJW04_13215 IPR037066 TonB-dependent receptor, plug domain superfamily PJW04_13215 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PJW04_13225 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily PJW04_13225 IPR006710 Glycoside hydrolase, family 43 PJW04_13230 IPR006311 Twin-arginine translocation pathway, signal sequence PJW04_13230 IPR008979 Galactose-binding-like domain superfamily PJW04_13230 IPR011081 Bacterial Ig-related PJW04_13230 IPR012341 Six-hairpin glycosidase-like superfamily PJW04_13230 IPR008928 Six-hairpin glycosidase superfamily PJW04_13230 IPR013783 Immunoglobulin-like fold PJW04_13235 IPR010916 TonB box, conserved site PJW04_13235 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PJW04_13235 IPR010101 TonB-dependent vitamin B12 transporter BtuB PJW04_13235 IPR037066 TonB-dependent receptor, plug domain superfamily PJW04_13235 IPR000531 TonB-dependent receptor-like, beta-barrel PJW04_13235 IPR010917 TonB-dependent receptor, conserved site PJW04_13235 IPR012910 TonB-dependent receptor, plug domain PJW04_13235 IPR039426 Vitamin B12 transporter BtuB-like PJW04_13245 IPR030400 Sedolisin domain PJW04_13245 IPR015366 Peptidase S53, activation domain PJW04_13245 IPR023828 Peptidase S8, subtilisin, Ser-active site PJW04_13245 IPR000209 Peptidase S8/S53 domain PJW04_13245 IPR036852 Peptidase S8/S53 domain superfamily PJW04_13265 IPR002293 Amino acid/polyamine transporter I PJW04_13280 IPR001714 Peptidase M24, methionine aminopeptidase PJW04_13280 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site PJW04_13280 IPR000587 Creatinase, N-terminal PJW04_13280 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal PJW04_13280 IPR036005 Creatinase/aminopeptidase-like PJW04_13280 IPR000994 Peptidase M24 PJW04_13285 IPR016161 Aldehyde/histidinol dehydrogenase PJW04_13285 IPR016162 Aldehyde dehydrogenase, N-terminal PJW04_13285 IPR015590 Aldehyde dehydrogenase domain PJW04_13285 IPR016163 Aldehyde dehydrogenase, C-terminal PJW04_13290 IPR013785 Aldolase-type TIM barrel PJW04_13290 IPR002220 DapA-like PJW04_13290 IPR020624 Schiff base-forming aldolase, conserved site PJW04_13290 IPR020625 Schiff base-forming aldolase, active site PJW04_13290 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA PJW04_13295 IPR007419 BFD-like [2Fe-2S]-binding domain PJW04_13295 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily PJW04_13295 IPR036188 FAD/NAD(P)-binding domain superfamily PJW04_13295 IPR023753 FAD/NAD(P)-binding domain PJW04_13295 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B PJW04_13305 IPR006076 FAD dependent oxidoreductase PJW04_13305 IPR036188 FAD/NAD(P)-binding domain superfamily PJW04_13305 IPR012727 Glycine oxidase ThiO PJW04_13310 IPR008794 Proline racemase family PJW04_13320 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain PJW04_13320 IPR036225 SRP/SRP receptor, N-terminal PJW04_13320 IPR004390 Signal-recognition particle receptor FtsY PJW04_13320 IPR013822 Signal recognition particle SRP54, helical bundle PJW04_13320 IPR003593 AAA+ ATPase domain PJW04_13320 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_13320 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily PJW04_13325 IPR004035 Endonuclease III, iron-sulphur binding site PJW04_13325 IPR003265 HhH-GPD domain PJW04_13325 IPR000445 Helix-hairpin-helix motif PJW04_13325 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal PJW04_13325 IPR029119 MutY, C-terminal PJW04_13325 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif PJW04_13325 IPR004036 Endonuclease III-like, conserved site-2 PJW04_13325 IPR005760 A/G-specific adenine glycosylase MutY PJW04_13325 IPR015797 NUDIX hydrolase-like domain superfamily PJW04_13325 IPR011257 DNA glycosylase PJW04_13330 IPR007457 Fe(II) trafficking protein YggX PJW04_13330 IPR036766 Fe(II) trafficking protein YggX superfamily PJW04_13335 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_13335 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_13335 IPR011006 CheY-like superfamily PJW04_13335 IPR005467 Histidine kinase domain PJW04_13335 IPR035965 PAS domain superfamily PJW04_13335 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW04_13335 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PJW04_13335 IPR001610 PAC motif PJW04_13335 IPR000014 PAS domain PJW04_13335 IPR000700 PAS-associated, C-terminal PJW04_13335 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PJW04_13335 IPR001789 Signal transduction response regulator, receiver domain PJW04_13350 IPR000305 GIY-YIG endonuclease PJW04_13350 IPR035901 GIY-YIG endonuclease superfamily PJW04_13365 IPR012674 Calycin PJW04_13365 IPR022271 Lipocalin, ApoD type PJW04_13365 IPR002446 Lipocalin, bacterial PJW04_13365 IPR022272 Lipocalin family conserved site PJW04_13365 IPR000566 Lipocalin/cytosolic fatty-acid binding domain PJW04_13375 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain PJW04_13375 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily PJW04_13375 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal PJW04_13375 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily PJW04_13375 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain PJW04_13375 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal PJW04_13375 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal PJW04_13385 IPR005477 Deoxyxylulose-5-phosphate synthase PJW04_13385 IPR029061 Thiamin diphosphate-binding fold PJW04_13385 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II PJW04_13385 IPR005475 Transketolase-like, pyrimidine-binding domain PJW04_13385 IPR020826 Transketolase binding site PJW04_13385 IPR033248 Transketolase, C-terminal domain PJW04_13385 IPR005474 Transketolase, N-terminal PJW04_13405 IPR036291 NAD(P)-binding domain superfamily PJW04_13405 IPR002225 3-beta hydroxysteroid dehydrogenase/isomerase PJW04_13410 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain PJW04_13410 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain PJW04_13410 IPR017782 Hydroxyacylglutathione hydrolase PJW04_13410 IPR001279 Metallo-beta-lactamase PJW04_13410 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PJW04_13415 IPR016039 Thiolase-like PJW04_13415 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III PJW04_13415 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal PJW04_13415 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 PJW04_13430 IPR023085 UDP-N-acetyl-D-mannosaminuronic acid transferase PJW04_13430 IPR004629 Glycosyl transferase WecB/TagA/CpsF PJW04_13445 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain PJW04_13455 IPR001296 Glycosyl transferase, family 1 PJW04_13455 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain PJW04_13475 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ PJW04_13475 IPR003362 Bacterial sugar transferase PJW04_13475 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase PJW04_13495 IPR000551 MerR-type HTH domain PJW04_13495 IPR009061 Putative DNA-binding domain superfamily PJW04_13500 IPR020816 Histone-like DNA-binding protein, conserved site PJW04_13500 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily PJW04_13500 IPR005684 Integration host factor, alpha subunit PJW04_13500 IPR000119 Histone-like DNA-binding protein PJW04_13505 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain PJW04_13505 IPR002547 tRNA-binding domain PJW04_13505 IPR005147 tRNA synthetase, B5-domain PJW04_13505 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain PJW04_13505 IPR005121 Ferrodoxin-fold anticodon-binding domain PJW04_13505 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit PJW04_13505 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 PJW04_13505 IPR005146 B3/B4 tRNA-binding domain PJW04_13505 IPR009061 Putative DNA-binding domain superfamily PJW04_13505 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily PJW04_13505 IPR012340 Nucleic acid-binding, OB-fold PJW04_13510 IPR006195 Aminoacyl-tRNA synthetase, class II PJW04_13510 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit PJW04_13510 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal PJW04_13510 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial PJW04_13510 IPR002319 Phenylalanyl-tRNA synthetase PJW04_13510 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm PJW04_13515 IPR005813 Ribosomal protein L20 PJW04_13515 IPR035566 Ribosomal protein L20, C-terminal PJW04_13520 IPR021137 Ribosomal protein L35 PJW04_13520 IPR018265 Ribosomal protein L35, conserved site PJW04_13520 IPR001706 Ribosomal protein L35, non-mitochondrial PJW04_13520 IPR037229 Ribosomal protein L35 superfamily PJW04_13525 IPR019815 Translation initiation factor 3, C-terminal PJW04_13525 IPR019814 Translation initiation factor 3, N-terminal PJW04_13525 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily PJW04_13525 IPR019813 Translation initiation factor 3, conserved site PJW04_13525 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily PJW04_13525 IPR001288 Translation initiation factor 3 PJW04_13530 IPR006195 Aminoacyl-tRNA synthetase, class II PJW04_13530 IPR033728 Threonine-tRNA ligase catalytic core domain PJW04_13530 IPR012947 Threonyl/alanyl tRNA synthetase, SAD PJW04_13530 IPR002320 Threonine-tRNA ligase, class IIa PJW04_13530 IPR012676 TGS-like PJW04_13530 IPR004095 TGS PJW04_13530 IPR012675 Beta-grasp domain superfamily PJW04_13530 IPR036621 Anticodon-binding domain superfamily PJW04_13530 IPR004154 Anticodon-binding PJW04_13530 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) PJW04_13530 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily PJW04_13535 IPR028082 Periplasmic binding protein-like I PJW04_13535 IPR000843 LacI-type HTH domain PJW04_13535 IPR010982 Lambda repressor-like, DNA-binding domain superfamily PJW04_13540 IPR002044 Carbohydrate binding module family 20 PJW04_13540 IPR013783 Immunoglobulin-like fold PJW04_13540 IPR006047 Glycosyl hydrolase, family 13, catalytic domain PJW04_13540 IPR013780 Glycosyl hydrolase, all-beta PJW04_13540 IPR017853 Glycoside hydrolase superfamily PJW04_13540 IPR013784 Carbohydrate-binding-like fold PJW04_13540 IPR031319 Alpha-amylase, C-terminal domain PJW04_13545 IPR039672 Lactose permease-like PJW04_13545 IPR011055 Duplicated hybrid motif PJW04_13545 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 PJW04_13545 IPR018043 Sodium:galactoside symporter, conserved site PJW04_13545 IPR001927 Sodium:galactoside symporter PJW04_13545 IPR036259 MFS transporter superfamily PJW04_13555 IPR017853 Glycoside hydrolase superfamily PJW04_13555 IPR013780 Glycosyl hydrolase, all-beta PJW04_13555 IPR029486 Glycosyl-hydrolase 97, N-terminal domain PJW04_13555 IPR013785 Aldolase-type TIM barrel PJW04_13555 IPR014718 Glycoside hydrolase-type carbohydrate-binding PJW04_13555 IPR029483 Glycosyl-hydrolase 97, C-terminal oligomerisation domain PJW04_13555 IPR019563 Glycosyl-hydrolase 97, catalytic domain PJW04_13570 IPR006047 Glycosyl hydrolase, family 13, catalytic domain PJW04_13570 IPR013780 Glycosyl hydrolase, all-beta PJW04_13570 IPR017853 Glycoside hydrolase superfamily PJW04_13630 IPR004346 CagE, TrbE, VirB component of type IV transporter system PJW04_13630 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain PJW04_13630 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_13635 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB PJW04_13645 IPR008258 Transglycosylase SLT domain 1 PJW04_13645 IPR023346 Lysozyme-like domain superfamily PJW04_13650 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_13650 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PJW04_13650 IPR001482 Type II/IV secretion system protein PJW04_13650 IPR014155 Type IV secretion system protein VirB11 PJW04_13655 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI PJW04_13655 IPR042217 Type IV secretion system, VirB10/TrbI PJW04_13675 IPR003688 Type IV secretion system protein TraG/VirD4 PJW04_13675 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_13690 IPR004807 UvrABC system, subunit B PJW04_13690 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_13690 IPR006935 Helicase/UvrB, N-terminal PJW04_13690 IPR001943 UVR domain PJW04_13690 IPR036876 UVR domain superfamily PJW04_13690 IPR001650 Helicase, C-terminal PJW04_13690 IPR041471 UvrB, interaction domain PJW04_13690 IPR024759 UvrB, YAD/RRR-motif-containing domain PJW04_13690 IPR014001 Helicase superfamily 1/2, ATP-binding domain PJW04_13705 IPR031982 Type IV minor pilin ComP PJW04_13705 IPR012902 Prokaryotic N-terminal methylation site PJW04_13710 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily PJW04_13710 IPR008707 PilC beta-propeller domain PJW04_13735 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region PJW04_13735 IPR010559 Signal transduction histidine kinase, internal region PJW04_13735 IPR029016 GAF-like domain superfamily PJW04_13735 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_13735 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_13740 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal PJW04_13740 IPR021826 Domain of unknown function DUF3412 PJW04_13740 IPR031100 LOG family PJW04_13740 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily PJW04_13745 IPR013784 Carbohydrate-binding-like fold PJW04_13745 IPR000531 TonB-dependent receptor-like, beta-barrel PJW04_13745 IPR039426 Vitamin B12 transporter BtuB-like PJW04_13750 IPR002771 Multiple antibiotic resistance (MarC)-related PJW04_13760 IPR002109 Glutaredoxin PJW04_13760 IPR036249 Thioredoxin-like superfamily PJW04_13760 IPR004480 Monothiol glutaredoxin-related PJW04_13760 IPR014434 Monothiol glutaredoxin PJW04_13760 IPR033658 Glutaredoxin, PICOT-like PJW04_13765 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily PJW04_13765 IPR019831 Manganese/iron superoxide dismutase, N-terminal PJW04_13765 IPR019833 Manganese/iron superoxide dismutase, binding site PJW04_13765 IPR001189 Manganese/iron superoxide dismutase PJW04_13765 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily PJW04_13765 IPR019832 Manganese/iron superoxide dismutase, C-terminal PJW04_13770 IPR011761 ATP-grasp fold PJW04_13770 IPR011054 Rudiment single hybrid motif PJW04_13770 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain PJW04_13770 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type PJW04_13770 IPR013815 ATP-grasp fold, subdomain 1 PJW04_13770 IPR016185 Pre-ATP-grasp domain superfamily PJW04_13770 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit PJW04_13775 IPR033747 Class I PurE PJW04_13775 IPR024694 PurE, prokaryotic type PJW04_13775 IPR035893 PurE domain superfamily PJW04_13775 IPR000031 PurE domain PJW04_13785 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal PJW04_13785 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal PJW04_13785 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal PJW04_13785 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD PJW04_13785 IPR004393 Nicotinate-nucleotide pyrophosphorylase PJW04_13785 IPR013785 Aldolase-type TIM barrel PJW04_13785 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily PJW04_13795 IPR020568 Ribosomal protein S5 domain 2-type fold PJW04_13795 IPR003029 S1 domain PJW04_13795 IPR022967 RNA-binding domain, S1 PJW04_13795 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily PJW04_13795 IPR004087 K Homology domain PJW04_13795 IPR027408 PNPase/RNase PH domain superfamily PJW04_13795 IPR012162 Polyribonucleotide nucleotidyltransferase PJW04_13795 IPR012340 Nucleic acid-binding, OB-fold PJW04_13795 IPR036612 K Homology domain, type 1 superfamily PJW04_13795 IPR001247 Exoribonuclease, phosphorolytic domain 1 PJW04_13795 IPR015847 Exoribonuclease, phosphorolytic domain 2 PJW04_13795 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain PJW04_13795 IPR004088 K Homology domain, type 1 PJW04_13795 IPR036345 Exoribonuclease, PH domain 2 superfamily PJW04_13800 IPR000589 Ribosomal protein S15 PJW04_13800 IPR005290 Ribosomal protein S15, bacterial-type PJW04_13800 IPR009068 S15/NS1, RNA-binding PJW04_13805 IPR014780 tRNA pseudouridine synthase II, TruB PJW04_13805 IPR032819 tRNA pseudouridylate synthase B, C-terminal PJW04_13805 IPR002501 Pseudouridine synthase II, N-terminal PJW04_13805 IPR020103 Pseudouridine synthase, catalytic domain superfamily PJW04_13805 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal PJW04_13805 IPR015947 PUA-like superfamily PJW04_13810 IPR015946 K homology domain-like, alpha/beta PJW04_13810 IPR023799 Ribosome-binding factor A domain superfamily PJW04_13810 IPR000238 Ribosome-binding factor A PJW04_13810 IPR020053 Ribosome-binding factor A, conserved site PJW04_13815 IPR006847 Translation initiation factor IF-2, N-terminal PJW04_13815 IPR013575 Initiation factor 2 associated domain, bacterial PJW04_13815 IPR009061 Putative DNA-binding domain superfamily PJW04_13815 IPR036925 Translation initiation factor IF-2, domain 3 superfamily PJW04_13815 IPR009000 Translation protein, beta-barrel domain superfamily PJW04_13815 IPR015760 Translation initiation factor IF- 2 PJW04_13815 IPR000178 Translation initiation factor aIF-2, bacterial-like PJW04_13815 IPR000795 Transcription factor, GTP-binding domain PJW04_13815 IPR005225 Small GTP-binding protein domain PJW04_13815 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_13815 IPR023115 Translation initiation factor IF- 2, domain 3 PJW04_13820 IPR013735 Transcription factor NusA, N-terminal PJW04_13820 IPR010213 Transcription termination factor NusA PJW04_13820 IPR010214 Transcription termination factor NusA, C-terminal duplication PJW04_13820 IPR003029 S1 domain PJW04_13820 IPR025249 KH domain, NusA-like PJW04_13820 IPR036555 NusA, N-terminal domain superfamily PJW04_13820 IPR030842 Transcription termination/antitermination protein NusA, bacterial PJW04_13820 IPR012340 Nucleic acid-binding, OB-fold PJW04_13820 IPR009019 K homology domain superfamily, prokaryotic type PJW04_13820 IPR015946 K homology domain-like, alpha/beta PJW04_13820 IPR022967 RNA-binding domain, S1 PJW04_13820 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical PJW04_13825 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily PJW04_13825 IPR003728 Ribosome maturation factor RimP PJW04_13825 IPR028998 Ribosome maturation factor RimP, C-terminal PJW04_13825 IPR028989 Ribosome maturation factor RimP, N-terminal PJW04_13825 IPR035956 RimP, N-terminal domain superfamily PJW04_13835 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 PJW04_13835 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit PJW04_13840 IPR003918 NADH:ubiquinone oxidoreductase PJW04_13840 IPR010227 NADH-quinone oxidoreductase, chain M/4 PJW04_13840 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit PJW04_13840 IPR000260 NADH:ubiquinone oxidoreductase chain 4, N-terminal PJW04_13845 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup PJW04_13845 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 PJW04_13845 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal PJW04_13845 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit PJW04_13850 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K PJW04_13850 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like PJW04_13855 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 PJW04_13855 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ PJW04_13860 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PJW04_13860 IPR010226 NADH-quinone oxidoreductase, chain I PJW04_13860 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PJW04_13865 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H PJW04_13865 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site PJW04_13870 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding PJW04_13870 IPR015405 NADH-quinone oxidoreductase, chain G, C-terminal PJW04_13870 IPR010228 NADH:ubiquinone oxidoreductase, subunit G PJW04_13870 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain PJW04_13870 IPR006656 Molybdopterin oxidoreductase PJW04_13870 IPR036010 2Fe-2S ferredoxin-like superfamily PJW04_13870 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site PJW04_13870 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain PJW04_13875 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site PJW04_13875 IPR011537 NADH ubiquinone oxidoreductase, F subunit PJW04_13875 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain PJW04_13875 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily PJW04_13875 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain PJW04_13875 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily PJW04_13875 IPR019554 Soluble ligand binding domain PJW04_13880 IPR002023 NADH-quinone oxidoreductase subunit E-like PJW04_13880 IPR042128 NuoE domain PJW04_13880 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal PJW04_13880 IPR036249 Thioredoxin-like superfamily PJW04_13885 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site PJW04_13885 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily PJW04_13885 IPR001135 NADH-quinone oxidoreductase, subunit D PJW04_13885 IPR029014 [NiFe]-hydrogenase, large subunit PJW04_13885 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H PJW04_13890 IPR010218 NADH dehydrogenase, subunit C PJW04_13890 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily PJW04_13890 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit PJW04_13890 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site PJW04_13895 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit PJW04_13895 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit PJW04_13900 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily PJW04_13900 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid PJW04_13900 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 PJW04_13915 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic PJW04_13915 IPR035990 Triosephosphate isomerase superfamily PJW04_13915 IPR013785 Aldolase-type TIM barrel PJW04_13915 IPR020861 Triosephosphate isomerase, active site PJW04_13915 IPR000652 Triosephosphate isomerase PJW04_13920 IPR020904 Short-chain dehydrogenase/reductase, conserved site PJW04_13920 IPR036291 NAD(P)-binding domain superfamily PJW04_13920 IPR002347 Short-chain dehydrogenase/reductase SDR PJW04_13935 IPR001633 EAL domain PJW04_13935 IPR035919 EAL domain superfamily PJW04_13935 IPR029787 Nucleotide cyclase PJW04_13935 IPR005330 MHYT domain PJW04_13935 IPR000160 GGDEF domain PJW04_13950 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily PJW04_13950 IPR005841 Alpha-D-phosphohexomutase superfamily PJW04_13950 IPR006352 Phosphoglucosamine mutase, bacterial type PJW04_13950 IPR005843 Alpha-D-phosphohexomutase, C-terminal PJW04_13950 IPR016066 Alpha-D-phosphohexomutase, conserved site PJW04_13950 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III PJW04_13950 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III PJW04_13950 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I PJW04_13950 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II PJW04_13955 IPR034733 Acetyl-CoA carboxylase PJW04_13955 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit PJW04_13955 IPR029045 ClpP/crotonase-like domain superfamily PJW04_13955 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal PJW04_13955 IPR041010 Acetyl-coA carboxylase zinc finger domain PJW04_13960 IPR002028 Tryptophan synthase, alpha chain PJW04_13960 IPR018204 Tryptophan synthase, alpha chain, active site PJW04_13960 IPR013785 Aldolase-type TIM barrel PJW04_13960 IPR011060 Ribulose-phosphate binding barrel PJW04_13970 IPR001926 Pyridoxal-phosphate dependent enzyme PJW04_13970 IPR006653 Tryptophan synthase, beta chain, conserved site PJW04_13970 IPR006654 Tryptophan synthase, beta chain PJW04_13970 IPR023026 Tryptophan synthase beta chain/beta chain-like PJW04_13970 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme PJW04_13975 IPR000847 Transcription regulator HTH, LysR PJW04_13975 IPR005119 LysR, substrate-binding PJW04_13975 IPR037418 HTH-type transcriptional regulator TrpI, PBP2 PJW04_13975 IPR036390 Winged helix DNA-binding domain superfamily PJW04_13975 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_13980 IPR013785 Aldolase-type TIM barrel PJW04_13980 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) PJW04_13980 IPR011060 Ribulose-phosphate binding barrel PJW04_13985 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain PJW04_13985 IPR001406 Pseudouridine synthase I, TruA PJW04_13985 IPR020095 Pseudouridine synthase I, TruA, C-terminal PJW04_13985 IPR020103 Pseudouridine synthase, catalytic domain superfamily PJW04_13995 IPR038440 FimV, C-terminal domain superfamily PJW04_13995 IPR018392 LysM domain PJW04_13995 IPR036779 LysM domain superfamily PJW04_13995 IPR020011 Motility protein FimV, C-terminal PJW04_13995 IPR020012 Motility protein FimV, N-terminal PJW04_13995 IPR011990 Tetratricopeptide-like helical domain superfamily PJW04_13995 IPR018392 LysM domain PJW04_13995 IPR011990 Tetratricopeptide-like helical domain superfamily PJW04_13995 IPR020012 Motility protein FimV, N-terminal PJW04_13995 IPR036779 LysM domain superfamily PJW04_13995 IPR038440 FimV, C-terminal domain superfamily PJW04_13995 IPR020011 Motility protein FimV, C-terminal PJW04_14000 IPR012080 Aspartate-semialdehyde dehydrogenase PJW04_14000 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type PJW04_14000 IPR036291 NAD(P)-binding domain superfamily PJW04_14000 IPR000534 Semialdehyde dehydrogenase, NAD-binding PJW04_14000 IPR012280 Semialdehyde dehydrogenase, dimerisation domain PJW04_14005 IPR036291 NAD(P)-binding domain superfamily PJW04_14005 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain PJW04_14005 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PJW04_14005 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PJW04_14005 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 PJW04_14010 IPR000453 Chorismate synthase PJW04_14010 IPR035904 Chorismate synthase AroC superfamily PJW04_14010 IPR020541 Chorismate synthase, conserved site PJW04_14015 IPR007848 Methyltransferase small domain PJW04_14015 IPR004556 Methyltransferase HemK-like PJW04_14015 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase PJW04_14015 IPR002052 DNA methylase, N-6 adenine-specific, conserved site PJW04_14015 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW04_14020 IPR003782 Copper chaperone SCO1/SenC PJW04_14020 IPR036249 Thioredoxin-like superfamily PJW04_14025 IPR003817 Phosphatidylserine decarboxylase-related PJW04_14025 IPR033177 Phosphatidylserine decarboxylase PJW04_14025 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 PJW04_14035 IPR033186 Helicase HerA-like C-terminal PJW04_14035 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_14040 IPR015797 NUDIX hydrolase-like domain superfamily PJW04_14040 IPR004385 Nucleoside diphosphate pyrophosphatase PJW04_14040 IPR000086 NUDIX hydrolase domain PJW04_14055 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily PJW04_14055 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily PJW04_14055 IPR018151 Transcription elongation factor, GreA/GreB, conserved site PJW04_14055 IPR028624 Transcription elongation factor GreA/GreB PJW04_14055 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal PJW04_14055 IPR023459 Transcription elongation factor GreA/GreB family PJW04_14055 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal PJW04_14055 IPR006358 Transcription elongation factor GreB PJW04_14060 IPR041582 RimO, TRAM domain PJW04_14060 IPR007197 Radical SAM PJW04_14060 IPR023404 Radical SAM, alpha/beta horseshoe PJW04_14060 IPR013848 Methylthiotransferase, N-terminal PJW04_14060 IPR020612 Methylthiotransferase, conserved site PJW04_14060 IPR006638 Elp3/MiaB/NifB PJW04_14060 IPR005840 Ribosomal protein S12 methylthiotransferase RimO PJW04_14060 IPR002792 TRAM domain PJW04_14060 IPR005839 Methylthiotransferase PJW04_14060 IPR038135 Methylthiotransferase, N-terminal domain superfamily PJW04_14065 IPR002925 Dienelactone hydrolase PJW04_14065 IPR029058 Alpha/Beta hydrolase fold PJW04_14085 IPR029054 dUTPase-like PJW04_14085 IPR036157 dUTPase-like superfamily PJW04_14085 IPR033704 dUTPase, trimeric PJW04_14085 IPR011962 dCTP deaminase PJW04_14090 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_14090 IPR000808 Mrp, conserved site PJW04_14090 IPR019591 Mrp/NBP35 ATP-binding protein PJW04_14090 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 PJW04_14095 IPR039426 Vitamin B12 transporter BtuB-like PJW04_14095 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PJW04_14095 IPR012910 TonB-dependent receptor, plug domain PJW04_14095 IPR000531 TonB-dependent receptor-like, beta-barrel PJW04_14095 IPR037066 TonB-dependent receptor, plug domain superfamily PJW04_14095 IPR010101 TonB-dependent vitamin B12 transporter BtuB PJW04_14095 IPR010917 TonB-dependent receptor, conserved site PJW04_14095 IPR010916 TonB box, conserved site PJW04_14105 IPR036188 FAD/NAD(P)-binding domain superfamily PJW04_14110 IPR000718 Peptidase M13 PJW04_14110 IPR008753 Peptidase M13, N-terminal domain PJW04_14110 IPR024079 Metallopeptidase, catalytic domain superfamily PJW04_14110 IPR018497 Peptidase M13, C-terminal domain PJW04_14110 IPR042089 Peptidase M13, domain 2 PJW04_14115 IPR024079 Metallopeptidase, catalytic domain superfamily PJW04_14115 IPR000718 Peptidase M13 PJW04_14115 IPR018497 Peptidase M13, C-terminal domain PJW04_14115 IPR042089 Peptidase M13, domain 2 PJW04_14115 IPR008753 Peptidase M13, N-terminal domain PJW04_14135 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site PJW04_14135 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I PJW04_14135 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PJW04_14135 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily PJW04_14135 IPR023753 FAD/NAD(P)-binding domain PJW04_14135 IPR036188 FAD/NAD(P)-binding domain superfamily PJW04_14135 IPR006322 Glutathione reductase, eukaryote/bacterial PJW04_14140 IPR023080 D-amino acid dehydrogenase DadA PJW04_14140 IPR006076 FAD dependent oxidoreductase PJW04_14140 IPR036188 FAD/NAD(P)-binding domain superfamily PJW04_14145 IPR007349 Domain of unknown function DUF418 PJW04_14150 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain PJW04_14155 IPR000064 Endopeptidase, NLPC/P60 domain PJW04_14155 IPR038765 Papain-like cysteine peptidase superfamily PJW04_14160 IPR000064 Endopeptidase, NLPC/P60 domain PJW04_14160 IPR038765 Papain-like cysteine peptidase superfamily PJW04_14170 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC PJW04_14170 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW04_14170 IPR041698 Methyltransferase domain 25 PJW04_14175 IPR033380 Glutamate-aspartate symport protein GltP/GltT PJW04_14175 IPR018107 Sodium:dicarboxylate symporter, conserved site PJW04_14175 IPR001991 Sodium:dicarboxylate symporter PJW04_14175 IPR036458 Sodium:dicarboxylate symporter superfamily PJW04_14180 IPR001952 Alkaline phosphatase PJW04_14180 IPR018299 Alkaline phosphatase, active site PJW04_14180 IPR017850 Alkaline-phosphatase-like, core domain superfamily PJW04_14185 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal PJW04_14185 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PJW04_14185 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal PJW04_14185 IPR012094 tRNA(Ile)-lysidine synthase PJW04_14185 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal PJW04_14185 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain PJW04_14190 IPR003761 Exonuclease VII, small subunit PJW04_14190 IPR037004 Exonuclease VII, small subunit superfamily PJW04_14195 IPR033749 Polyprenyl synthetase, conserved site PJW04_14195 IPR000092 Polyprenyl synthetase PJW04_14195 IPR008949 Isoprenoid synthase domain superfamily PJW04_14200 IPR029463 Lysine-specific metallo-endopeptidase PJW04_14200 IPR034115 Peptidyl-Lys metallopeptidase catalytic domain PJW04_14200 IPR024079 Metallopeptidase, catalytic domain superfamily PJW04_14210 IPR002510 Metalloprotease TldD/PmbA PJW04_14210 IPR035068 Metalloprotease TldD/PmbA, N-terminal PJW04_14210 IPR036059 Metalloprotease TldD/PmbA superfamily PJW04_14215 IPR023153 PSPTO4464-like domain superfamily PJW04_14215 IPR006839 Ribosome-associated, YjgA PJW04_14220 IPR025502 TldD PJW04_14220 IPR002510 Metalloprotease TldD/PmbA PJW04_14220 IPR035068 Metalloprotease TldD/PmbA, N-terminal PJW04_14220 IPR036059 Metalloprotease TldD/PmbA superfamily PJW04_14230 IPR032712 AsmA-like, C-terminal PJW04_14230 IPR011836 Conserved hypothetical protein CHP02099 PJW04_14230 IPR025263 Domain of unknown function DUF3971 PJW04_14235 IPR003029 S1 domain PJW04_14235 IPR022967 RNA-binding domain, S1 PJW04_14235 IPR012340 Nucleic acid-binding, OB-fold PJW04_14235 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G PJW04_14235 IPR004659 Ribonuclease E/G PJW04_14240 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein PJW04_14240 IPR029001 Inosine triphosphate pyrophosphatase-like PJW04_14245 IPR007497 Protein of unknown function DUF541 PJW04_14255 IPR029028 Alpha/beta knot methyltransferases PJW04_14255 IPR003742 RNA methyltransferase RlmH PJW04_14255 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PJW04_14265 IPR004394 Protein Iojap/ribosomal silencing factor RsfS PJW04_14270 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase PJW04_14270 IPR004821 Cytidyltransferase-like domain PJW04_14270 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PJW04_14285 IPR002302 Leucine-tRNA ligase PJW04_14285 IPR025709 Leucyl-tRNA synthetase, editing domain PJW04_14285 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site PJW04_14285 IPR002300 Aminoacyl-tRNA synthetase, class Ia PJW04_14285 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding PJW04_14285 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain PJW04_14285 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding PJW04_14285 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PJW04_14295 IPR036249 Thioredoxin-like superfamily PJW04_14295 IPR011990 Tetratricopeptide-like helical domain superfamily PJW04_14295 IPR013766 Thioredoxin domain PJW04_14325 IPR007211 Protein of unknown function DUF378 PJW04_14330 IPR029000 Cyclophilin-like domain superfamily PJW04_14330 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase PJW04_14330 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site PJW04_14330 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain PJW04_14340 IPR036390 Winged helix DNA-binding domain superfamily PJW04_14340 IPR005119 LysR, substrate-binding PJW04_14340 IPR000847 Transcription regulator HTH, LysR PJW04_14340 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_14370 IPR039421 Type I protein exporter PJW04_14370 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_14370 IPR017871 ABC transporter, conserved site PJW04_14370 IPR003439 ABC transporter-like PJW04_14370 IPR036640 ABC transporter type 1, transmembrane domain superfamily PJW04_14370 IPR003593 AAA+ ATPase domain PJW04_14370 IPR011527 ABC transporter type 1, transmembrane domain PJW04_14380 IPR001036 Acriflavin resistance protein PJW04_14380 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PJW04_14395 IPR003423 Outer membrane efflux protein PJW04_14395 IPR010131 RND efflux system, outer membrane lipoprotein, NodT PJW04_14400 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_14400 IPR001867 OmpR/PhoB-type DNA-binding domain PJW04_14400 IPR039420 Transcriptional regulatory protein WalR-like PJW04_14400 IPR011006 CheY-like superfamily PJW04_14400 IPR001789 Signal transduction response regulator, receiver domain PJW04_14405 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PJW04_14405 IPR005467 Histidine kinase domain PJW04_14405 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_14405 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PJW04_14405 IPR003660 HAMP domain PJW04_14405 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW04_14405 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_14410 IPR006153 Cation/H+ exchanger PJW04_14410 IPR038770 Sodium/solute symporter superfamily PJW04_14415 IPR012338 Beta-lactamase/transpeptidase-like PJW04_14415 IPR001466 Beta-lactamase-related PJW04_14420 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily PJW04_14420 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein PJW04_14420 IPR010203 Regulator of ribonuclease activity A PJW04_14435 IPR029787 Nucleotide cyclase PJW04_14435 IPR000160 GGDEF domain PJW04_14440 IPR036986 RNA-binding S4 domain superfamily PJW04_14440 IPR020103 Pseudouridine synthase, catalytic domain superfamily PJW04_14440 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain PJW04_14440 IPR006145 Pseudouridine synthase, RsuA/RluA PJW04_14440 IPR002942 RNA-binding S4 domain PJW04_14440 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site PJW04_14440 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F PJW04_14445 IPR013656 PAS fold-4 PJW04_14445 IPR000014 PAS domain PJW04_14445 IPR035919 EAL domain superfamily PJW04_14445 IPR035965 PAS domain superfamily PJW04_14445 IPR029787 Nucleotide cyclase PJW04_14445 IPR000160 GGDEF domain PJW04_14445 IPR001633 EAL domain PJW04_14450 IPR011545 DEAD/DEAH box helicase domain PJW04_14450 IPR034415 CsdA, RNA recognition motif PJW04_14450 IPR028618 ATP-dependent RNA helicase DeaD PJW04_14450 IPR001650 Helicase, C-terminal PJW04_14450 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain PJW04_14450 IPR014014 RNA helicase, DEAD-box type, Q motif PJW04_14450 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site PJW04_14450 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_14450 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily PJW04_14450 IPR014001 Helicase superfamily 1/2, ATP-binding domain PJW04_14455 IPR013324 RNA polymerase sigma factor, region 3/4-like PJW04_14455 IPR028617 RNA polymerase sigma factor FliA PJW04_14455 IPR007630 RNA polymerase sigma-70 region 4 PJW04_14455 IPR007624 RNA polymerase sigma-70 region 3 PJW04_14455 IPR000943 RNA polymerase sigma-70 PJW04_14455 IPR013325 RNA polymerase sigma factor, region 2 PJW04_14455 IPR014284 RNA polymerase sigma-70 like domain PJW04_14455 IPR007627 RNA polymerase sigma-70 region 2 PJW04_14455 IPR012845 RNA polymerase sigma factor, FliA/WhiG PJW04_14500 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_14500 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain PJW04_14500 IPR023546 Methylated-DNA--protein-cysteine methyltransferase PJW04_14500 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily PJW04_14500 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site PJW04_14500 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding PJW04_14500 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain PJW04_14510 IPR023861 Chloride channel, ClcA PJW04_14510 IPR014743 Chloride channel, core PJW04_14510 IPR001807 Chloride channel, voltage gated PJW04_14530 IPR039426 Vitamin B12 transporter BtuB-like PJW04_14530 IPR012910 TonB-dependent receptor, plug domain PJW04_14530 IPR037066 TonB-dependent receptor, plug domain superfamily PJW04_14530 IPR000531 TonB-dependent receptor-like, beta-barrel PJW04_14540 IPR008979 Galactose-binding-like domain superfamily PJW04_14540 IPR000209 Peptidase S8/S53 domain PJW04_14540 IPR036852 Peptidase S8/S53 domain superfamily PJW04_14540 IPR023827 Peptidase S8, subtilisin, Asp-active site PJW04_14540 IPR023828 Peptidase S8, subtilisin, Ser-active site PJW04_14540 IPR015500 Peptidase S8, subtilisin-related PJW04_14540 IPR002884 P domain PJW04_14550 IPR023828 Peptidase S8, subtilisin, Ser-active site PJW04_14550 IPR036852 Peptidase S8/S53 domain superfamily PJW04_14550 IPR008979 Galactose-binding-like domain superfamily PJW04_14550 IPR023827 Peptidase S8, subtilisin, Asp-active site PJW04_14550 IPR015500 Peptidase S8, subtilisin-related PJW04_14550 IPR000209 Peptidase S8/S53 domain PJW04_14550 IPR002884 P domain PJW04_14560 IPR018170 Aldo/keto reductase, conserved site PJW04_14560 IPR020471 Aldo/keto reductase PJW04_14560 IPR023210 NADP-dependent oxidoreductase domain PJW04_14560 IPR036812 NADP-dependent oxidoreductase domain superfamily PJW04_14565 IPR020846 Major facilitator superfamily domain PJW04_14565 IPR011701 Major facilitator superfamily PJW04_14565 IPR036259 MFS transporter superfamily PJW04_14570 IPR005119 LysR, substrate-binding PJW04_14570 IPR000847 Transcription regulator HTH, LysR PJW04_14570 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_14570 IPR036390 Winged helix DNA-binding domain superfamily PJW04_14580 IPR009057 Homeobox-like domain superfamily PJW04_14580 IPR018060 DNA binding HTH domain, AraC-type PJW04_14580 IPR009594 Transcription regulator HTH, AraC, N-terminal PJW04_14590 IPR036390 Winged helix DNA-binding domain superfamily PJW04_14590 IPR000847 Transcription regulator HTH, LysR PJW04_14590 IPR005119 LysR, substrate-binding PJW04_14590 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_14595 IPR011075 Tetracyclin repressor-like, C-terminal domain PJW04_14595 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PJW04_14595 IPR001647 DNA-binding HTH domain, TetR-type PJW04_14595 IPR009057 Homeobox-like domain superfamily PJW04_14600 IPR003423 Outer membrane efflux protein PJW04_14600 IPR010131 RND efflux system, outer membrane lipoprotein, NodT PJW04_14605 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PJW04_14605 IPR001036 Acriflavin resistance protein PJW04_14605 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 PJW04_14610 IPR006143 RND efflux pump, membrane fusion protein PJW04_14610 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PJW04_14620 IPR036390 Winged helix DNA-binding domain superfamily PJW04_14620 IPR002481 Ferric-uptake regulator PJW04_14620 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_14625 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding PJW04_14625 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 PJW04_14625 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site PJW04_14625 IPR000924 Glutamyl/glutaminyl-tRNA synthetase PJW04_14625 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain PJW04_14625 IPR033910 Glutamyl-tRNA synthetase PJW04_14625 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PJW04_14625 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial PJW04_14650 IPR010364 Uncharacterised protein family, inner membrane CreD PJW04_14660 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW04_14660 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_14660 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_14660 IPR003660 HAMP domain PJW04_14660 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PJW04_14660 IPR029151 Periplasmic sensor-like domain superfamily PJW04_14660 IPR005467 Histidine kinase domain PJW04_14660 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PJW04_14665 IPR001867 OmpR/PhoB-type DNA-binding domain PJW04_14665 IPR016032 Signal transduction response regulator, C-terminal effector PJW04_14665 IPR001789 Signal transduction response regulator, receiver domain PJW04_14665 IPR039420 Transcriptional regulatory protein WalR-like PJW04_14665 IPR011006 CheY-like superfamily PJW04_14665 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_14670 IPR002052 DNA methylase, N-6 adenine-specific, conserved site PJW04_14670 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW04_14670 IPR007473 Ribosomal RNA large subunit methyltransferase J PJW04_14680 IPR004576 Transcription-repair coupling factor PJW04_14680 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_14680 IPR041471 UvrB, interaction domain PJW04_14680 IPR001650 Helicase, C-terminal PJW04_14680 IPR014001 Helicase superfamily 1/2, ATP-binding domain PJW04_14680 IPR011545 DEAD/DEAH box helicase domain PJW04_14680 IPR003711 CarD-like/TRCF domain PJW04_14680 IPR036101 CarD-like/TRCF domain superfamily PJW04_14680 IPR037235 TRCF-like, C-terminal domain PJW04_14680 IPR005118 Transcription-repair-coupling factor, C-terminal domain PJW04_14695 IPR004105 Histidine kinase CheA-like, homodimeric domain PJW04_14695 IPR002545 CheW-like domain PJW04_14695 IPR015162 CheY binding PJW04_14695 IPR035891 CheY-binding domain of CheA PJW04_14695 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_14695 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_14695 IPR005467 Histidine kinase domain PJW04_14695 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PJW04_14695 IPR036061 CheW-like domain superfamily PJW04_14695 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily PJW04_14695 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW04_14695 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain PJW04_14695 IPR036641 HPT domain superfamily PJW04_14700 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily PJW04_14700 IPR004090 Chemotaxis methyl-accepting receptor PJW04_14700 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site PJW04_14700 IPR003660 HAMP domain PJW04_14700 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PJW04_14700 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding PJW04_14705 IPR002545 CheW-like domain PJW04_14705 IPR039315 Chemotaxis protein CheW PJW04_14705 IPR036061 CheW-like domain superfamily PJW04_14710 IPR001610 PAC motif PJW04_14710 IPR035965 PAS domain superfamily PJW04_14710 IPR029787 Nucleotide cyclase PJW04_14710 IPR000700 PAS-associated, C-terminal PJW04_14710 IPR000160 GGDEF domain PJW04_14710 IPR000014 PAS domain PJW04_14710 IPR001633 EAL domain PJW04_14710 IPR012226 Diguanylate cyclase/phosphodiesterase PJW04_14710 IPR035919 EAL domain superfamily PJW04_14715 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily PJW04_14715 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal PJW04_14715 IPR000780 MCP methyltransferase, CheR-type PJW04_14715 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW04_14715 IPR026024 Chemotaxis protein methyltransferase CheR PJW04_14715 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal PJW04_14720 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type PJW04_14720 IPR035909 Methylesterase CheB, C-terminal PJW04_14720 IPR011006 CheY-like superfamily PJW04_14720 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase PJW04_14720 IPR001789 Signal transduction response regulator, receiver domain PJW04_14725 IPR030871 Cardiolipin synthase C PJW04_14725 IPR025202 Phospholipase D-like domain PJW04_14725 IPR001736 Phospholipase D/Transphosphatidylase PJW04_14730 IPR000718 Peptidase M13 PJW04_14730 IPR024079 Metallopeptidase, catalytic domain superfamily PJW04_14730 IPR042089 Peptidase M13, domain 2 PJW04_14730 IPR018497 Peptidase M13, C-terminal domain PJW04_14730 IPR008753 Peptidase M13, N-terminal domain PJW04_14740 IPR029033 Histidine phosphatase superfamily PJW04_14740 IPR013078 Histidine phosphatase superfamily, clade-1 PJW04_14740 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site PJW04_14740 IPR005952 Phosphoglycerate mutase 1 PJW04_14745 IPR007581 Endonuclease V PJW04_14755 IPR012093 Pirin PJW04_14755 IPR008778 Pirin, C-terminal domain PJW04_14755 IPR003829 Pirin, N-terminal domain PJW04_14755 IPR014710 RmlC-like jelly roll fold PJW04_14755 IPR011051 RmlC-like cupin domain superfamily PJW04_14770 IPR003829 Pirin, N-terminal domain PJW04_14770 IPR011051 RmlC-like cupin domain superfamily PJW04_14770 IPR014710 RmlC-like jelly roll fold PJW04_14770 IPR008778 Pirin, C-terminal domain PJW04_14770 IPR012093 Pirin PJW04_14775 IPR025299 CstA, C-terminal domain PJW04_14775 IPR003706 CstA, N-terminal domain PJW04_14780 IPR007423 Selenoprotein, putative PJW04_14795 IPR029058 Alpha/Beta hydrolase fold PJW04_14815 IPR003777 XdhC- CoxI PJW04_14815 IPR027051 XdhC Rossmann domain PJW04_14820 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily PJW04_14820 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding PJW04_14820 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily PJW04_14820 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PJW04_14825 IPR002346 Molybdopterin dehydrogenase, FAD-binding PJW04_14825 IPR036318 FAD-binding, type PCMH-like superfamily PJW04_14825 IPR016166 FAD-binding domain, PCMH-type PJW04_14825 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily PJW04_14825 IPR016169 FAD-binding, type PCMH, subdomain 2 PJW04_14825 IPR005107 CO dehydrogenase flavoprotein, C-terminal PJW04_14830 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal PJW04_14830 IPR006311 Twin-arginine translocation pathway, signal sequence PJW04_14830 IPR012675 Beta-grasp domain superfamily PJW04_14830 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site PJW04_14830 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain PJW04_14830 IPR036010 2Fe-2S ferredoxin-like superfamily PJW04_14830 IPR036884 [2Fe-2S]-binding domain superfamily PJW04_14830 IPR002888 [2Fe-2S]-binding PJW04_14835 IPR016039 Thiolase-like PJW04_14835 IPR009081 Phosphopantetheine binding ACP domain PJW04_14835 IPR020806 Polyketide synthase, phosphopantetheine-binding domain PJW04_14835 IPR013968 Polyketide synthase, ketoreductase domain PJW04_14835 IPR020843 Polyketide synthase, enoylreductase domain PJW04_14835 IPR042104 Polyketide synthase, dehydratase domain superfamily PJW04_14835 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain PJW04_14835 IPR032821 Ketoacyl-synthetase, C-terminal extension PJW04_14835 IPR020807 Polyketide synthase, dehydratase domain PJW04_14835 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding PJW04_14835 IPR014030 Beta-ketoacyl synthase, N-terminal PJW04_14835 IPR014031 Beta-ketoacyl synthase, C-terminal PJW04_14835 IPR018201 Beta-ketoacyl synthase, active site PJW04_14835 IPR013154 Alcohol dehydrogenase, N-terminal PJW04_14835 IPR013149 Alcohol dehydrogenase, C-terminal PJW04_14835 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase PJW04_14835 IPR014043 Acyl transferase PJW04_14835 IPR036736 ACP-like superfamily PJW04_14835 IPR036291 NAD(P)-binding domain superfamily PJW04_14835 IPR011032 GroES-like superfamily PJW04_14840 IPR029787 Nucleotide cyclase PJW04_14840 IPR000160 GGDEF domain PJW04_14840 IPR016132 Phytochrome chromophore attachment domain PJW04_14840 IPR001294 Phytochrome PJW04_14840 IPR013515 Phytochrome, central region PJW04_14840 IPR035919 EAL domain superfamily PJW04_14840 IPR001633 EAL domain PJW04_14840 IPR029016 GAF-like domain superfamily PJW04_14840 IPR003018 GAF domain PJW04_14845 IPR012340 Nucleic acid-binding, OB-fold PJW04_14845 IPR011344 Single-stranded DNA-binding protein PJW04_14845 IPR000424 Primosome PriB/single-strand DNA-binding PJW04_14850 IPR008949 Isoprenoid synthase domain superfamily PJW04_14850 IPR000092 Polyprenyl synthetase PJW04_14850 IPR033749 Polyprenyl synthetase, conserved site PJW04_14860 IPR013221 Mur ligase, central PJW04_14860 IPR018109 Folylpolyglutamate synthetase, conserved site PJW04_14860 IPR036565 Mur-like, catalytic domain superfamily PJW04_14860 IPR004101 Mur ligase, C-terminal PJW04_14860 IPR036615 Mur ligase, C-terminal domain superfamily PJW04_14860 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase PJW04_14875 IPR018042 Aspartate kinase, conserved site PJW04_14875 IPR002912 ACT domain PJW04_14875 IPR041745 Lysine-sensitive aspartokinase 3, N-terminal catalytic domain PJW04_14875 IPR001048 Aspartate/glutamate/uridylate kinase PJW04_14875 IPR005260 Aspartate kinase, monofunctional class PJW04_14875 IPR001341 Aspartate kinase PJW04_14875 IPR036393 Acetylglutamate kinase-like superfamily PJW04_14880 IPR003719 Phenazine biosynthesis PhzF protein PJW04_14885 IPR003719 Phenazine biosynthesis PhzF protein PJW04_14895 IPR015946 K homology domain-like, alpha/beta PJW04_14895 IPR003718 OsmC/Ohr family PJW04_14895 IPR036102 OsmC/Ohr superfamily PJW04_14895 IPR019904 Peroxiredoxin OsmC PJW04_14900 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain PJW04_14900 IPR002082 Aspartate carbamoyltransferase PJW04_14900 IPR006130 Aspartate/ornithine carbamoyltransferase PJW04_14900 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding PJW04_14900 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily PJW04_14905 IPR012337 Ribonuclease H-like superfamily PJW04_14905 IPR005227 Putative pre-16S rRNA nuclease PJW04_14905 IPR006641 YqgF/RNase H-like domain PJW04_14905 IPR037027 YqgF/RNase H-like domain superfamily PJW04_14910 IPR003774 Protein of unknown function UPF0301 PJW04_14915 IPR025777 GMP synthetase ATP pyrophosphatase domain PJW04_14915 IPR029062 Class I glutamine amidotransferase-like PJW04_14915 IPR011257 DNA glycosylase PJW04_14915 IPR017926 Glutamine amidotransferase PJW04_14915 IPR001674 GMP synthase, C-terminal PJW04_14915 IPR016181 Acyl-CoA N-acyltransferase PJW04_14915 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PJW04_14915 IPR000182 GNAT domain PJW04_14915 IPR005019 Methyladenine glycosylase PJW04_14930 IPR001482 Type II/IV secretion system protein PJW04_14930 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_14930 IPR006321 Pilus retraction protein PilT PJW04_14935 IPR003593 AAA+ ATPase domain PJW04_14935 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_14935 IPR006321 Pilus retraction protein PilT PJW04_14935 IPR001482 Type II/IV secretion system protein PJW04_14940 IPR001608 Alanine racemase, N-terminal PJW04_14940 IPR029066 PLP-binding barrel PJW04_14940 IPR011078 Pyridoxal phosphate homeostasis protein PJW04_14945 IPR036291 NAD(P)-binding domain superfamily PJW04_14945 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily PJW04_14945 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal PJW04_14945 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain PJW04_14945 IPR000304 Pyrroline-5-carboxylate reductase PJW04_14955 IPR011055 Duplicated hybrid motif PJW04_14955 IPR016047 Peptidase M23 PJW04_14975 IPR029062 Class I glutamine amidotransferase-like PJW04_14975 IPR006286 Deglycase PfpI PJW04_14975 IPR002818 DJ-1/PfpI PJW04_14985 IPR000944 Transcription regulator Rrf2-type PJW04_14985 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_14985 IPR036390 Winged helix DNA-binding domain superfamily PJW04_14985 IPR030489 Transcription regulator Rrf2-type, conserved site PJW04_14990 IPR010231 SUF system FeS cluster assembly, SufB PJW04_14990 IPR037284 SUF system FeS cluster assembly, SufBD superfamily PJW04_14990 IPR000825 SUF system FeS cluster assembly, SufBD PJW04_14995 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_14995 IPR003439 ABC transporter-like PJW04_14995 IPR003593 AAA+ ATPase domain PJW04_14995 IPR017871 ABC transporter, conserved site PJW04_14995 IPR010230 FeS cluster assembly SUF system, ATPase SufC PJW04_15000 IPR011542 SUF system FeS cluster assembly, SufD PJW04_15000 IPR037284 SUF system FeS cluster assembly, SufBD superfamily PJW04_15000 IPR000825 SUF system FeS cluster assembly, SufBD PJW04_15005 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PJW04_15005 IPR010970 Cysteine desulfurase, SufS PJW04_15005 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PJW04_15005 IPR015424 Pyridoxal phosphate-dependent transferase PJW04_15005 IPR000192 Aminotransferase class V domain PJW04_15005 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site PJW04_15005 IPR016454 Cysteine desulfurase PJW04_15010 IPR017813 Mycothiol acetyltransferase PJW04_15010 IPR000182 GNAT domain PJW04_15010 IPR016181 Acyl-CoA N-acyltransferase PJW04_15015 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily PJW04_15015 IPR017941 Rieske [2Fe-2S] iron-sulphur domain PJW04_15020 IPR030148 Catecholate siderophore receptor Fiu PJW04_15020 IPR012910 TonB-dependent receptor, plug domain PJW04_15020 IPR037066 TonB-dependent receptor, plug domain superfamily PJW04_15020 IPR039423 TonB-dependent receptor-like PJW04_15020 IPR000531 TonB-dependent receptor-like, beta-barrel PJW04_15020 IPR010916 TonB box, conserved site PJW04_15020 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PJW04_15020 IPR010105 TonB-dependent siderophore receptor PJW04_15025 IPR006620 Prolyl 4-hydroxylase, alpha subunit PJW04_15025 IPR005123 Oxoglutarate/iron-dependent dioxygenase PJW04_15025 IPR023550 PKHD-type hydroxylase PJW04_15025 IPR041097 PKHD-type hydroxylase C-terminal domain PJW04_15050 IPR042159 Flavin-trafficking protein ApbE PJW04_15050 IPR003374 ApbE-like superfamily PJW04_15050 IPR024932 Flavin transferase ApbE PJW04_15055 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding PJW04_15055 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria PJW04_15055 IPR001094 Flavodoxin-like PJW04_15055 IPR008254 Flavodoxin/nitric oxide synthase PJW04_15055 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase PJW04_15055 IPR029039 Flavoprotein-like superfamily PJW04_15055 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PJW04_15055 IPR001433 Oxidoreductase FAD/NAD(P)-binding PJW04_15055 IPR017938 Riboflavin synthase-like beta-barrel PJW04_15055 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain PJW04_15055 IPR017927 FAD-binding domain, ferredoxin reductase-type PJW04_15055 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily PJW04_15070 IPR004509 Competence protein ComEA, helix-hairpin-helix domain PJW04_15070 IPR010994 RuvA domain 2-like PJW04_15085 IPR002575 Aminoglycoside phosphotransferase PJW04_15085 IPR011009 Protein kinase-like domain superfamily PJW04_15090 IPR005835 Nucleotidyl transferase domain PJW04_15090 IPR029044 Nucleotide-diphospho-sugar transferases PJW04_15095 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_15095 IPR020591 Chromosomal replication control, initiator DnaA-like PJW04_15095 IPR013317 Chromosomal replication initiator protein DnaA PJW04_15095 IPR017788 DnaA regulatory inactivator Hda PJW04_15095 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae PJW04_15100 IPR002549 Transmembrane protein TqsA-like PJW04_15110 IPR036676 PurM-like, C-terminal domain superfamily PJW04_15110 IPR010918 PurM-like, C-terminal domain PJW04_15110 IPR016188 PurM-like, N-terminal domain PJW04_15110 IPR036921 PurM-like, N-terminal domain superfamily PJW04_15110 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase PJW04_15120 IPR002376 Formyl transferase, N-terminal PJW04_15120 IPR036477 Formyl transferase, N-terminal domain superfamily PJW04_15120 IPR004607 Phosphoribosylglycinamide formyltransferase PJW04_15120 IPR001555 Phosphoribosylglycinamide formyltransferase, active site PJW04_15140 IPR001986 Enolpyruvate transferase domain PJW04_15140 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase PJW04_15140 IPR036968 Enolpyruvate transferase domain superfamily PJW04_15140 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta PJW04_15145 IPR002634 BolA protein PJW04_15145 IPR036065 BolA-like superfamily PJW04_15150 IPR035474 KpsF-like, SIS domain PJW04_15150 IPR000644 CBS domain PJW04_15150 IPR001347 Sugar isomerase (SIS) PJW04_15150 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type PJW04_15155 IPR036412 HAD-like superfamily PJW04_15155 IPR023214 HAD superfamily PJW04_15155 IPR010023 KdsC family PJW04_15165 IPR014340 Lipopolysaccharide export system protein LptA PJW04_15165 IPR005653 Organic solvent tolerance-like, N-terminal PJW04_15170 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_15170 IPR030921 LPS export ABC transporter, ATP-binding protein LptB PJW04_15170 IPR003439 ABC transporter-like PJW04_15170 IPR003593 AAA+ ATPase domain PJW04_15170 IPR017871 ABC transporter, conserved site PJW04_15175 IPR000394 RNA polymerase sigma factor 54 PJW04_15175 IPR007046 RNA polymerase sigma factor 54, core-binding domain PJW04_15175 IPR007634 RNA polymerase sigma factor 54, DNA-binding PJW04_15175 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily PJW04_15180 IPR036567 Ribosome hibernation promotion factor-like PJW04_15180 IPR003489 Ribosome hibernation promoting factor/RaiA PJW04_15185 IPR016152 Phosphotransferase/anion transporter PJW04_15185 IPR002178 PTS EIIA type-2 domain PJW04_15185 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN PJW04_15190 IPR003755 HPr(Ser) kinase/phosphorylase PJW04_15190 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily PJW04_15190 IPR011104 HPr kinase/phosphorylase, C-terminal PJW04_15190 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal PJW04_15195 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_15195 IPR005337 RapZ-like family PJW04_15205 IPR000032 Phosphocarrier protein HPr-like PJW04_15205 IPR035895 HPr-like superfamily PJW04_15205 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site PJW04_15205 IPR002114 Phosphotransferase system, HPr serine phosphorylation site PJW04_15210 IPR008279 PEP-utilising enzyme, mobile domain PJW04_15210 IPR006318 Phosphotransferase system, enzyme I-like PJW04_15210 IPR024692 Phosphotransferase system, enzyme I PJW04_15210 IPR008731 Phosphotransferase system, enzyme I N-terminal PJW04_15210 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily PJW04_15210 IPR040442 Pyruvate kinase-like domain superfamily PJW04_15210 IPR036637 Phosphohistidine domain superfamily PJW04_15210 IPR023151 PEP-utilising enzyme, conserved site PJW04_15210 IPR000121 PEP-utilising enzyme, C-terminal PJW04_15210 IPR018274 PEP-utilising enzyme, active site PJW04_15210 IPR036618 PtsI, HPr-binding domain superfamily PJW04_15220 IPR006667 SLC41 divalent cation transporters, integral membrane domain PJW04_15220 IPR000644 CBS domain PJW04_15220 IPR006668 Magnesium transporter, MgtE intracellular domain PJW04_15220 IPR038076 MgtE, N-terminal domain superfamily PJW04_15220 IPR038048 Magnesium transporter MgtE, transmembrane domain PJW04_15220 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily PJW04_15220 IPR006669 Magnesium transporter MgtE PJW04_15225 IPR029058 Alpha/Beta hydrolase fold PJW04_15225 IPR000801 Putative esterase PJW04_15230 IPR003317 Cytochrome ubiquinol oxidase subunit 2 PJW04_15235 IPR002585 Cytochrome ubiquinol oxidase subunit 1 PJW04_15245 IPR004840 Amino acid permease, conserved site PJW04_15245 IPR004841 Amino acid permease/ SLC12A domain PJW04_15250 IPR012334 Pectin lyase fold PJW04_15250 IPR011050 Pectin lyase fold/virulence factor PJW04_15250 IPR002022 Pectate lyase PJW04_15255 IPR029058 Alpha/Beta hydrolase fold PJW04_15255 IPR000073 Alpha/beta hydrolase fold-1 PJW04_15255 IPR002410 Peptidase S33 PJW04_15255 IPR005945 Proline-specific peptidase PJW04_15260 IPR011006 CheY-like superfamily PJW04_15260 IPR000792 Transcription regulator LuxR, C-terminal PJW04_15260 IPR016032 Signal transduction response regulator, C-terminal effector PJW04_15265 IPR004841 Amino acid permease/ SLC12A domain PJW04_15280 IPR009003 Peptidase S1, PA clan PJW04_15290 IPR001279 Metallo-beta-lactamase PJW04_15290 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PJW04_15295 IPR036188 FAD/NAD(P)-binding domain superfamily PJW04_15295 IPR006905 Flavin-dependent halogenase PJW04_15295 IPR033856 Flavin-dependent tryptophan halogenase PJW04_15320 IPR000551 MerR-type HTH domain PJW04_15320 IPR010211 Redox-sensitive transcriptional activator SoxR PJW04_15320 IPR015358 Transcription regulator MerR, DNA binding PJW04_15320 IPR009061 Putative DNA-binding domain superfamily PJW04_15325 IPR036259 MFS transporter superfamily PJW04_15325 IPR004638 Drug resistance transporter EmrB-like PJW04_15325 IPR011701 Major facilitator superfamily PJW04_15325 IPR020846 Major facilitator superfamily domain PJW04_15330 IPR016185 Pre-ATP-grasp domain superfamily PJW04_15330 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain PJW04_15355 IPR007157 PspA/IM30 PJW04_15365 IPR000659 Pyridoxamine 5'-phosphate oxidase PJW04_15365 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative PJW04_15365 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal PJW04_15365 IPR012349 FMN-binding split barrel PJW04_15365 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site PJW04_15370 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_15370 IPR031322 Shikimate kinase/gluconokinase PJW04_15370 IPR000623 Shikimate kinase/Threonine synthase-like 1 PJW04_15370 IPR023000 Shikimate kinase, conserved site PJW04_15375 IPR030960 3-dehydroquinate synthase domain PJW04_15375 IPR030963 3-dehydroquinate synthase family PJW04_15375 IPR016037 3-dehydroquinate synthase AroB PJW04_15385 IPR038071 UROD/MetE-like superfamily PJW04_15385 IPR006361 Uroporphyrinogen decarboxylase HemE PJW04_15385 IPR000257 Uroporphyrinogen decarboxylase (URO-D) PJW04_15390 IPR004638 Drug resistance transporter EmrB-like PJW04_15390 IPR011701 Major facilitator superfamily PJW04_15390 IPR020846 Major facilitator superfamily domain PJW04_15390 IPR036259 MFS transporter superfamily PJW04_15390 IPR023721 Multidrug resistance protein MdtD PJW04_15395 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_15395 IPR005467 Histidine kinase domain PJW04_15395 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PJW04_15395 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PJW04_15395 IPR001789 Signal transduction response regulator, receiver domain PJW04_15395 IPR033414 Periplasmic sensor domain PJW04_15395 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW04_15395 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain PJW04_15395 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_15395 IPR036641 HPT domain superfamily PJW04_15395 IPR003660 HAMP domain PJW04_15395 IPR011006 CheY-like superfamily PJW04_15400 IPR005467 Histidine kinase domain PJW04_15400 IPR001789 Signal transduction response regulator, receiver domain PJW04_15400 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW04_15400 IPR033414 Periplasmic sensor domain PJW04_15400 IPR036641 HPT domain superfamily PJW04_15400 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PJW04_15400 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain PJW04_15400 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_15400 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_15400 IPR003660 HAMP domain PJW04_15400 IPR011006 CheY-like superfamily PJW04_15400 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PJW04_15405 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PJW04_15405 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PJW04_15405 IPR036641 HPT domain superfamily PJW04_15405 IPR033414 Periplasmic sensor domain PJW04_15405 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW04_15405 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain PJW04_15405 IPR001789 Signal transduction response regulator, receiver domain PJW04_15405 IPR003660 HAMP domain PJW04_15405 IPR011006 CheY-like superfamily PJW04_15405 IPR005467 Histidine kinase domain PJW04_15405 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_15405 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_15410 IPR001789 Signal transduction response regulator, receiver domain PJW04_15410 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW04_15410 IPR036641 HPT domain superfamily PJW04_15410 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PJW04_15410 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PJW04_15410 IPR005467 Histidine kinase domain PJW04_15410 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_15410 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_15410 IPR011006 CheY-like superfamily PJW04_15410 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain PJW04_15415 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily PJW04_15415 IPR007372 Lipid/polyisoprenoid-binding, YceI-like PJW04_15415 IPR023480 Uncharacterised protein family UPF0312/YceI PJW04_15435 IPR005131 Serine dehydratase beta chain PJW04_15435 IPR005130 Serine dehydratase-like, alpha subunit PJW04_15435 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form PJW04_15435 IPR029009 Allosteric substrate binding domain superfamily PJW04_15440 IPR029058 Alpha/Beta hydrolase fold PJW04_15440 IPR000073 Alpha/beta hydrolase fold-1 PJW04_15440 IPR000639 Epoxide hydrolase-like PJW04_15440 IPR017727 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, BphD PJW04_15445 IPR036291 NAD(P)-binding domain superfamily PJW04_15445 IPR019811 Homoserine dehydrogenase, conserved site PJW04_15445 IPR001342 Homoserine dehydrogenase, catalytic PJW04_15445 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I PJW04_15445 IPR018042 Aspartate kinase, conserved site PJW04_15445 IPR001341 Aspartate kinase PJW04_15445 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding PJW04_15445 IPR001048 Aspartate/glutamate/uridylate kinase PJW04_15445 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain PJW04_15445 IPR036393 Acetylglutamate kinase-like superfamily PJW04_15450 IPR011821 O-succinylhomoserine (thiol)-lyase PJW04_15450 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme PJW04_15450 IPR015424 Pyridoxal phosphate-dependent transferase PJW04_15450 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PJW04_15450 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PJW04_15455 IPR008220 Homoserine/serine acetyltransferase MetX-like PJW04_15455 IPR000073 Alpha/beta hydrolase fold-1 PJW04_15455 IPR029058 Alpha/Beta hydrolase fold PJW04_15460 IPR011055 Duplicated hybrid motif PJW04_15460 IPR018392 LysM domain PJW04_15460 IPR013731 Opacity-associated protein A, N-terminal PJW04_15460 IPR016047 Peptidase M23 PJW04_15465 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily PJW04_15465 IPR031157 Tr-type G domain, conserved site PJW04_15465 IPR035647 EF-G domain III/V-like PJW04_15465 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_15465 IPR041732 Peptide chain release factor 3, GTP-binding domain PJW04_15465 IPR005225 Small GTP-binding protein domain PJW04_15465 IPR000795 Transcription factor, GTP-binding domain PJW04_15465 IPR009000 Translation protein, beta-barrel domain superfamily PJW04_15465 IPR004548 Peptide chain release factor 3 PJW04_15465 IPR032090 Peptide chain release factor 3, C-terminal PJW04_15470 IPR005744 Hly-III PJW04_15470 IPR004254 AdipoR/Haemolysin-III-related PJW04_15475 IPR007844 AsmA PJW04_15480 IPR000644 CBS domain PJW04_15480 IPR001093 IMP dehydrogenase/GMP reductase PJW04_15480 IPR013785 Aldolase-type TIM barrel PJW04_15480 IPR015875 IMP dehydrogenase / GMP reductase, conserved site PJW04_15480 IPR005990 Inosine-5'-monophosphate dehydrogenase PJW04_15485 IPR029044 Nucleotide-diphospho-sugar transferases PJW04_15485 IPR001173 Glycosyltransferase 2-like PJW04_15490 IPR023346 Lysozyme-like domain superfamily PJW04_15490 IPR001264 Glycosyl transferase, family 51 PJW04_15490 IPR011812 Biosynthetic peptidoglycan transglycosylase PJW04_15490 IPR036950 Penicillin binding protein transglycosylase domain PJW04_15495 IPR000397 Heat shock protein Hsp33 PJW04_15495 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily PJW04_15495 IPR016153 Heat shock protein Hsp33, N-terminal PJW04_15495 IPR016154 Heat shock protein Hsp33, C-terminal PJW04_15505 IPR010916 TonB box, conserved site PJW04_15505 IPR010101 TonB-dependent vitamin B12 transporter BtuB PJW04_15505 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PJW04_15505 IPR010917 TonB-dependent receptor, conserved site PJW04_15505 IPR039426 Vitamin B12 transporter BtuB-like PJW04_15505 IPR012910 TonB-dependent receptor, plug domain PJW04_15505 IPR037066 TonB-dependent receptor, plug domain superfamily PJW04_15505 IPR000531 TonB-dependent receptor-like, beta-barrel PJW04_15510 IPR001647 DNA-binding HTH domain, TetR-type PJW04_15510 IPR009057 Homeobox-like domain superfamily PJW04_15510 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PJW04_15515 IPR000639 Epoxide hydrolase-like PJW04_15515 IPR000073 Alpha/beta hydrolase fold-1 PJW04_15515 IPR029058 Alpha/Beta hydrolase fold PJW04_15520 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal PJW04_15520 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal PJW04_15520 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal PJW04_15520 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily PJW04_15520 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily PJW04_15520 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type PJW04_15555 IPR033753 Glycine cleavage system H-protein/Simiate PJW04_15555 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site PJW04_15555 IPR000089 Biotin/lipoyl attachment PJW04_15555 IPR002930 Glycine cleavage system H-protein PJW04_15555 IPR017453 Glycine cleavage system H-protein, subgroup PJW04_15555 IPR011053 Single hybrid motif PJW04_15560 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain PJW04_15560 IPR028896 Aminomethyltransferase-like PJW04_15560 IPR022903 Glycine cleavage system T protein, bacteria PJW04_15560 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal PJW04_15560 IPR006222 Aminomethyltransferase, folate-binding domain PJW04_15560 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 PJW04_15560 IPR006223 Glycine cleavage system T protein PJW04_15575 IPR003844 Uncharacterised protein family UPF0060 PJW04_15580 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core PJW04_15580 IPR011551 NTP pyrophosphohydrolase MazG PJW04_15585 IPR020583 Inositol monophosphatase, metal-binding site PJW04_15585 IPR000760 Inositol monophosphatase-like PJW04_15585 IPR020550 Inositol monophosphatase, conserved site PJW04_15585 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ PJW04_15590 IPR015797 NUDIX hydrolase-like domain superfamily PJW04_15590 IPR020084 NUDIX hydrolase, conserved site PJW04_15590 IPR000086 NUDIX hydrolase domain PJW04_15595 IPR015424 Pyridoxal phosphate-dependent transferase PJW04_15595 IPR005814 Aminotransferase class-III PJW04_15595 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA PJW04_15595 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PJW04_15595 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PJW04_15600 IPR006700 Ribosomal RNA small subunit methyltransferase E PJW04_15600 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PJW04_15600 IPR015947 PUA-like superfamily PJW04_15600 IPR029028 Alpha/beta knot methyltransferases PJW04_15605 IPR003836 Glucokinase PJW04_15620 IPR017853 Glycoside hydrolase superfamily PJW04_15620 IPR041704 CFLE, GH18 catalytic domain PJW04_15620 IPR011583 Chitinase II PJW04_15620 IPR029070 Chitinase insertion domain superfamily PJW04_15620 IPR001223 Glycoside hydrolase family 18, catalytic domain PJW04_15620 IPR018392 LysM domain PJW04_15620 IPR036779 LysM domain superfamily PJW04_15625 IPR025705 Beta-hexosaminidase PJW04_15625 IPR011658 PA14 domain PJW04_15625 IPR037524 PA14/GLEYA domain PJW04_15625 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal PJW04_15625 IPR029018 Beta-hexosaminidase-like, domain 2 PJW04_15625 IPR015883 Glycoside hydrolase family 20, catalytic domain PJW04_15625 IPR017853 Glycoside hydrolase superfamily PJW04_15635 IPR001764 Glycoside hydrolase, family 3, N-terminal PJW04_15635 IPR026891 Fibronectin type III-like domain PJW04_15635 IPR002772 Glycoside hydrolase family 3 C-terminal domain PJW04_15635 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily PJW04_15635 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily PJW04_15635 IPR017853 Glycoside hydrolase superfamily PJW04_15635 IPR013783 Immunoglobulin-like fold PJW04_15635 IPR011658 PA14 domain PJW04_15635 IPR037524 PA14/GLEYA domain PJW04_15645 IPR008928 Six-hairpin glycosidase superfamily PJW04_15645 IPR005887 Alpha-1,2-mannosidase, putative PJW04_15645 IPR014718 Glycoside hydrolase-type carbohydrate-binding PJW04_15645 IPR041371 Glycosyl hydrolase family 92 N-terminal domain PJW04_15645 IPR012939 Glycosyl hydrolase family 92 PJW04_15650 IPR026283 Beta-galactosidase 1-like PJW04_15650 IPR008979 Galactose-binding-like domain superfamily PJW04_15650 IPR001944 Glycoside hydrolase, family 35 PJW04_15650 IPR017853 Glycoside hydrolase superfamily PJW04_15650 IPR019801 Glycoside hydrolase, family 35, conserved site PJW04_15650 IPR031330 Glycoside hydrolase 35, catalytic domain PJW04_15680 IPR023648 Copper homeostasis CutC domain PJW04_15680 IPR036822 Copper homeostasis (CutC) domain superfamily PJW04_15680 IPR005627 Copper homeostasis protein CutC PJW04_15685 IPR000246 Peptidase T2, asparaginase 2 PJW04_15685 IPR029055 Nucleophile aminohydrolases, N-terminal PJW04_15685 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal PJW04_15690 IPR021908 Protein of unknown function DUF3520 PJW04_15690 IPR022156 Uncharacterised protein YfbK, N-terminal PJW04_15690 IPR002035 von Willebrand factor, type A PJW04_15690 IPR036465 von Willebrand factor A-like domain superfamily PJW04_15695 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 PJW04_15695 IPR013325 RNA polymerase sigma factor, region 2 PJW04_15695 IPR013324 RNA polymerase sigma factor, region 3/4-like PJW04_15695 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_15695 IPR007627 RNA polymerase sigma-70 region 2 PJW04_15695 IPR039425 RNA polymerase sigma-70 like PJW04_15695 IPR014284 RNA polymerase sigma-70 like domain PJW04_15695 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site PJW04_15705 IPR016181 Acyl-CoA N-acyltransferase PJW04_15705 IPR000182 GNAT domain PJW04_15720 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain PJW04_15720 IPR004105 Histidine kinase CheA-like, homodimeric domain PJW04_15720 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW04_15720 IPR036641 HPT domain superfamily PJW04_15720 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PJW04_15720 IPR005467 Histidine kinase domain PJW04_15720 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_15720 IPR001789 Signal transduction response regulator, receiver domain PJW04_15720 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_15720 IPR011006 CheY-like superfamily PJW04_15720 IPR002545 CheW-like domain PJW04_15720 IPR036061 CheW-like domain superfamily PJW04_15720 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily PJW04_15725 IPR003660 HAMP domain PJW04_15725 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PJW04_15725 IPR004090 Chemotaxis methyl-accepting receptor PJW04_15725 IPR029095 NarX-like, N-terminal PJW04_15730 IPR039315 Chemotaxis protein CheW PJW04_15730 IPR036061 CheW-like domain superfamily PJW04_15730 IPR002545 CheW-like domain PJW04_15735 IPR001789 Signal transduction response regulator, receiver domain PJW04_15735 IPR011006 CheY-like superfamily PJW04_15740 IPR001789 Signal transduction response regulator, receiver domain PJW04_15740 IPR011006 CheY-like superfamily PJW04_15745 IPR004218 Prokaryotic glutathione synthetase, ATP-binding PJW04_15745 IPR013815 ATP-grasp fold, subdomain 1 PJW04_15745 IPR011761 ATP-grasp fold PJW04_15745 IPR004215 Prokaryotic glutathione synthetase, N-terminal PJW04_15745 IPR016185 Pre-ATP-grasp domain superfamily PJW04_15745 IPR006284 Glutathione synthetase, prokaryotic PJW04_15780 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB PJW04_15780 IPR000905 Gcp-like domain PJW04_15785 IPR006555 ATP-dependent helicase, C-terminal PJW04_15785 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type PJW04_15785 IPR006935 Helicase/UvrB, N-terminal PJW04_15785 IPR014001 Helicase superfamily 1/2, ATP-binding domain PJW04_15785 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_15795 IPR001460 Penicillin-binding protein, transpeptidase PJW04_15795 IPR023346 Lysozyme-like domain superfamily PJW04_15795 IPR011813 Penicillin-binding protein 1B PJW04_15795 IPR036950 Penicillin binding protein transglycosylase domain PJW04_15795 IPR028166 Bifunctional transglycosylase second domain PJW04_15795 IPR001264 Glycosyl transferase, family 51 PJW04_15795 IPR012338 Beta-lactamase/transpeptidase-like PJW04_15800 IPR029044 Nucleotide-diphospho-sugar transferases PJW04_15800 IPR001173 Glycosyltransferase 2-like PJW04_15810 IPR003607 HD/PDEase domain PJW04_15810 IPR012675 Beta-grasp domain superfamily PJW04_15810 IPR002912 ACT domain PJW04_15810 IPR007685 RelA/SpoT PJW04_15810 IPR012676 TGS-like PJW04_15810 IPR004095 TGS PJW04_15810 IPR004811 RelA/SpoT family PJW04_15810 IPR033655 RelA, TGS domain PJW04_15815 IPR011725 Coenzyme PQQ biosynthesis protein A PJW04_15820 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PJW04_15820 IPR001279 Metallo-beta-lactamase PJW04_15820 IPR011842 Coenzyme PQQ biosynthesis protein B PJW04_15825 IPR016084 Haem oxygenase-like, multi-helical PJW04_15825 IPR039068 Pyrroloquinoline-quinone synthase-like PJW04_15825 IPR011845 Coenzyme PQQ biosynthesis protein C PJW04_15825 IPR004305 Thiaminase-2/PQQC PJW04_15830 IPR041881 Coenzyme PQQ synthesis protein D superfamily PJW04_15830 IPR022479 Coenzyme PQQ synthesis D, bacteria PJW04_15830 IPR008792 Coenzyme PQQ synthesis protein D PJW04_15835 IPR023885 4Fe4S-binding SPASM domain PJW04_15835 IPR013785 Aldolase-type TIM barrel PJW04_15835 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria PJW04_15835 IPR017200 Coenzyme PQQ synthesis protein E PJW04_15835 IPR007197 Radical SAM PJW04_15850 IPR003836 Glucokinase PJW04_15860 IPR010222 RNA helicase HrpA PJW04_15860 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_15860 IPR024590 RNA helicase HrpA, C-terminal PJW04_15860 IPR001650 Helicase, C-terminal PJW04_15860 IPR007502 Helicase-associated domain PJW04_15860 IPR011709 Domain of unknown function DUF1605 PJW04_15860 IPR011545 DEAD/DEAH box helicase domain PJW04_15860 IPR014001 Helicase superfamily 1/2, ATP-binding domain PJW04_15860 IPR003593 AAA+ ATPase domain PJW04_15865 IPR008331 Ferritin/DPS protein domain PJW04_15865 IPR009078 Ferritin-like superfamily PJW04_15865 IPR002177 DNA-binding protein Dps PJW04_15865 IPR023188 DNA-binding protein Dps, conserved site PJW04_15865 IPR012347 Ferritin-like PJW04_15870 IPR010997 HRDC-like superfamily PJW04_15870 IPR001650 Helicase, C-terminal PJW04_15870 IPR002121 HRDC domain PJW04_15870 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_15870 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain PJW04_15870 IPR018982 RQC domain PJW04_15870 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_15870 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial PJW04_15870 IPR004589 DNA helicase, ATP-dependent, RecQ type PJW04_15870 IPR011545 DEAD/DEAH box helicase domain PJW04_15870 IPR014001 Helicase superfamily 1/2, ATP-binding domain PJW04_15890 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain PJW04_15890 IPR020103 Pseudouridine synthase, catalytic domain superfamily PJW04_15890 IPR006145 Pseudouridine synthase, RsuA/RluA PJW04_15890 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F PJW04_15890 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site PJW04_15890 IPR002942 RNA-binding S4 domain PJW04_15890 IPR036986 RNA-binding S4 domain superfamily PJW04_15900 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site PJW04_15900 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding PJW04_15900 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PJW04_15900 IPR003660 HAMP domain PJW04_15900 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily PJW04_15900 IPR004090 Chemotaxis methyl-accepting receptor PJW04_15905 IPR001123 Amino acid exporter protein, LeuE-type PJW04_15905 IPR004777 L-lysine exporter/arginine exporter PJW04_15910 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_15910 IPR000847 Transcription regulator HTH, LysR PJW04_15910 IPR036390 Winged helix DNA-binding domain superfamily PJW04_15910 IPR005119 LysR, substrate-binding PJW04_15910 IPR017685 HTH-type transcriptional regulator ArgP PJW04_15920 IPR011102 Signal transduction histidine kinase, HWE region PJW04_15920 IPR035965 PAS domain superfamily PJW04_15920 IPR000700 PAS-associated, C-terminal PJW04_15920 IPR000014 PAS domain PJW04_15920 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_15920 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_15920 IPR001610 PAC motif PJW04_15925 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PJW04_15925 IPR018317 Queuosine biosynthesis protein QueC PJW04_15935 IPR024924 7-carboxy-7-deazaguanine synthase-like PJW04_15935 IPR013785 Aldolase-type TIM barrel PJW04_15935 IPR007197 Radical SAM PJW04_15945 IPR006664 Outer membrane protein, bacterial PJW04_15945 IPR006665 OmpA-like domain PJW04_15945 IPR006690 Outer membrane protein, OmpA-like, conserved site PJW04_15945 IPR036737 OmpA-like domain superfamily PJW04_15945 IPR039001 Peptidoglycan-associated lipoprotein PJW04_15945 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal PJW04_15950 IPR014167 Tol-Pal system protein TolB PJW04_15950 IPR011042 Six-bladed beta-propeller, TolB-like PJW04_15950 IPR011659 WD40-like Beta Propeller PJW04_15950 IPR036752 TolB, N-terminal domain superfamily PJW04_15950 IPR007195 TolB, N-terminal PJW04_15960 IPR003400 Biopolymer transport protein ExbD/TolR PJW04_15960 IPR014168 Tol-Pal system protein TolR PJW04_15965 IPR002898 MotA/TolQ/ExbB proton channel PJW04_15965 IPR014163 Tol-Pal system, TolQ PJW04_15970 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family PJW04_15970 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase PJW04_15970 IPR006683 Thioesterase domain PJW04_15970 IPR029069 HotDog domain superfamily PJW04_15970 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site PJW04_15975 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_15975 IPR036390 Winged helix DNA-binding domain superfamily PJW04_15975 IPR008824 RuvB-like P-loop domain PJW04_15975 IPR003593 AAA+ ATPase domain PJW04_15975 IPR041445 RuvB, AAA lid domain PJW04_15975 IPR004605 DNA helicase, Holliday junction RuvB-type PJW04_15975 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_15975 IPR008823 RuvB C-terminal winged helix domain PJW04_15985 IPR003855 Potassium transporter PJW04_15985 IPR023051 Potassium uptake protein, low affinity, Kup PJW04_15990 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial PJW04_15990 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 PJW04_15990 IPR012340 Nucleic acid-binding, OB-fold PJW04_15990 IPR000085 Bacterial DNA recombination protein RuvA PJW04_15990 IPR010994 RuvA domain 2-like PJW04_15990 IPR011114 Holliday junction DNA helicase RuvA, C-terminal PJW04_15990 IPR036267 RuvA, C-terminal domain superfamily PJW04_15995 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site PJW04_15995 IPR036397 Ribonuclease H superfamily PJW04_15995 IPR002176 Crossover junction endodeoxyribonuclease RuvC PJW04_15995 IPR012337 Ribonuclease H-like superfamily PJW04_16000 IPR017856 Integrase-like, N-terminal PJW04_16000 IPR002876 Transcriptional regulator TACO1-like PJW04_16000 IPR026564 Transcriptional regulator TACO1-like, domain 3 PJW04_16000 IPR029072 YebC-like PJW04_16030 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type PJW04_16030 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) PJW04_16030 IPR006195 Aminoacyl-tRNA synthetase, class II PJW04_16030 IPR004524 Aspartate-tRNA ligase, type 1 PJW04_16030 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb PJW04_16030 IPR004115 GAD-like domain superfamily PJW04_16030 IPR012340 Nucleic acid-binding, OB-fold PJW04_16030 IPR029351 GAD domain PJW04_16045 IPR036259 MFS transporter superfamily PJW04_16045 IPR020846 Major facilitator superfamily domain PJW04_16045 IPR011701 Major facilitator superfamily PJW04_16055 IPR006311 Twin-arginine translocation pathway, signal sequence PJW04_16055 IPR008475 Bacterial phospholipase C, C-terminal domain PJW04_16055 IPR007312 Phosphoesterase PJW04_16055 IPR017767 Bacterial phospholipase C, phosphocholine-specific PJW04_16055 IPR017850 Alkaline-phosphatase-like, core domain superfamily PJW04_16060 IPR013094 Alpha/beta hydrolase fold-3 PJW04_16060 IPR013830 SGNH hydrolase-type esterase domain PJW04_16060 IPR036514 SGNH hydrolase superfamily PJW04_16060 IPR029058 Alpha/Beta hydrolase fold PJW04_16065 IPR012338 Beta-lactamase/transpeptidase-like PJW04_16065 IPR000871 Beta-lactamase, class-A PJW04_16065 IPR023650 Beta-lactamase, class-A active site PJW04_16065 IPR006311 Twin-arginine translocation pathway, signal sequence PJW04_16070 IPR005119 LysR, substrate-binding PJW04_16070 IPR037420 HTH-type transcriptional activator AmpR, PBP2 PJW04_16070 IPR000847 Transcription regulator HTH, LysR PJW04_16070 IPR036390 Winged helix DNA-binding domain superfamily PJW04_16070 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_16080 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_16080 IPR017871 ABC transporter, conserved site PJW04_16080 IPR003593 AAA+ ATPase domain PJW04_16080 IPR003439 ABC transporter-like PJW04_16080 IPR032781 ABC-transporter extension domain PJW04_16085 IPR039426 Vitamin B12 transporter BtuB-like PJW04_16085 IPR010105 TonB-dependent siderophore receptor PJW04_16085 IPR010917 TonB-dependent receptor, conserved site PJW04_16085 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PJW04_16085 IPR000531 TonB-dependent receptor-like, beta-barrel PJW04_16085 IPR037066 TonB-dependent receptor, plug domain superfamily PJW04_16085 IPR012910 TonB-dependent receptor, plug domain PJW04_16095 IPR010917 TonB-dependent receptor, conserved site PJW04_16095 IPR039426 Vitamin B12 transporter BtuB-like PJW04_16095 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PJW04_16095 IPR012910 TonB-dependent receptor, plug domain PJW04_16095 IPR000531 TonB-dependent receptor-like, beta-barrel PJW04_16095 IPR037066 TonB-dependent receptor, plug domain superfamily PJW04_16095 IPR010105 TonB-dependent siderophore receptor PJW04_16100 IPR039426 Vitamin B12 transporter BtuB-like PJW04_16100 IPR012910 TonB-dependent receptor, plug domain PJW04_16100 IPR037066 TonB-dependent receptor, plug domain superfamily PJW04_16100 IPR000531 TonB-dependent receptor-like, beta-barrel PJW04_16100 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PJW04_16100 IPR010917 TonB-dependent receptor, conserved site PJW04_16100 IPR010105 TonB-dependent siderophore receptor PJW04_16105 IPR001128 Cytochrome P450 PJW04_16105 IPR002397 Cytochrome P450, B-class PJW04_16105 IPR017972 Cytochrome P450, conserved site PJW04_16105 IPR036396 Cytochrome P450 superfamily PJW04_16110 IPR006153 Cation/H+ exchanger PJW04_16110 IPR004771 K+/H+ exchanger PJW04_16110 IPR038770 Sodium/solute symporter superfamily PJW04_16110 IPR003148 Regulator of K+ conductance, N-terminal PJW04_16110 IPR036291 NAD(P)-binding domain superfamily PJW04_16135 IPR012910 TonB-dependent receptor, plug domain PJW04_16135 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PJW04_16135 IPR010916 TonB box, conserved site PJW04_16135 IPR000531 TonB-dependent receptor-like, beta-barrel PJW04_16135 IPR011662 Secretin/TonB, short N-terminal domain PJW04_16135 IPR037066 TonB-dependent receptor, plug domain superfamily PJW04_16135 IPR010917 TonB-dependent receptor, conserved site PJW04_16135 IPR010105 TonB-dependent siderophore receptor PJW04_16145 IPR022770 Ferric iron reductase FhuF domain PJW04_16145 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal PJW04_16145 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like PJW04_16150 IPR011701 Major facilitator superfamily PJW04_16150 IPR020846 Major facilitator superfamily domain PJW04_16150 IPR036259 MFS transporter superfamily PJW04_16150 IPR023692 Multidrug resistance protein MdtG PJW04_16150 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG PJW04_16155 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal PJW04_16155 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like PJW04_16155 IPR022770 Ferric iron reductase FhuF domain PJW04_16160 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal PJW04_16160 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal PJW04_16160 IPR022272 Lipocalin family conserved site PJW04_16160 IPR000183 Ornithine/DAP/Arg decarboxylase PJW04_16160 IPR002433 Ornithine decarboxylase PJW04_16160 IPR029066 PLP-binding barrel PJW04_16160 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal PJW04_16180 IPR003805 Adenosylcobinamide-GDP ribazoletransferase PJW04_16190 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic PJW04_16190 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like PJW04_16190 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal PJW04_16190 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily PJW04_16195 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_16195 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase PJW04_16200 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_16200 IPR011698 CobB/CobQ-like glutamine amidotransferase PJW04_16200 IPR004459 Cobyric acid synthase CobQ PJW04_16200 IPR033949 Cobyric acid synthase, glutamine amidotransferase type 1 PJW04_16200 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain PJW04_16200 IPR017929 CobB/CobQ glutamine amidotransferase PJW04_16200 IPR029062 Class I glutamine amidotransferase-like PJW04_16205 IPR004839 Aminotransferase, class I/classII PJW04_16205 IPR005860 L-threonine-O-3-phosphate decarboxylase PJW04_16205 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site PJW04_16205 IPR015424 Pyridoxal phosphate-dependent transferase PJW04_16205 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PJW04_16205 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PJW04_16210 IPR031347 Protein AmpE PJW04_16210 IPR004485 Cobalamin biosynthesis CobD/CbiB PJW04_16215 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain PJW04_16215 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR PJW04_16215 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_16230 IPR000531 TonB-dependent receptor-like, beta-barrel PJW04_16230 IPR037066 TonB-dependent receptor, plug domain superfamily PJW04_16230 IPR012910 TonB-dependent receptor, plug domain PJW04_16230 IPR039426 Vitamin B12 transporter BtuB-like PJW04_16230 IPR010101 TonB-dependent vitamin B12 transporter BtuB PJW04_16230 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PJW04_16235 IPR019489 Clp ATPase, C-terminal PJW04_16235 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_16235 IPR041546 ClpA/ClpB, AAA lid domain PJW04_16235 IPR028299 ClpA/B, conserved site 2 PJW04_16235 IPR036628 Clp, N-terminal domain superfamily PJW04_16235 IPR018368 ClpA/B, conserved site 1 PJW04_16235 IPR017730 Chaperonin ClpB PJW04_16235 IPR003959 ATPase, AAA-type, core PJW04_16235 IPR001270 ClpA/B family PJW04_16235 IPR003593 AAA+ ATPase domain PJW04_16235 IPR004176 Clp, N-terminal PJW04_16240 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB PJW04_16240 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_16240 IPR017871 ABC transporter, conserved site PJW04_16240 IPR003439 ABC transporter-like PJW04_16240 IPR003593 AAA+ ATPase domain PJW04_16245 IPR035901 GIY-YIG endonuclease superfamily PJW04_16245 IPR000305 GIY-YIG endonuclease PJW04_16280 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PJW04_16280 IPR010916 TonB box, conserved site PJW04_16280 IPR000531 TonB-dependent receptor-like, beta-barrel PJW04_16280 IPR037066 TonB-dependent receptor, plug domain superfamily PJW04_16280 IPR012910 TonB-dependent receptor, plug domain PJW04_16280 IPR039426 Vitamin B12 transporter BtuB-like PJW04_16280 IPR010917 TonB-dependent receptor, conserved site PJW04_16280 IPR010105 TonB-dependent siderophore receptor PJW04_16285 IPR003337 Trehalose-phosphatase PJW04_16285 IPR036412 HAD-like superfamily PJW04_16285 IPR006379 HAD-superfamily hydrolase, subfamily IIB PJW04_16285 IPR023214 HAD superfamily PJW04_16290 IPR008928 Six-hairpin glycosidase superfamily PJW04_16290 IPR012341 Six-hairpin glycosidase-like superfamily PJW04_16290 IPR011613 GH15-like domain PJW04_16295 IPR001830 Glycosyl transferase, family 20 PJW04_16295 IPR012766 Alpha,alpha-trehalose-phosphate synthase PJW04_16300 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PJW04_16300 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily PJW04_16300 IPR017511 PQQ-dependent membrane bound dehydrogenase PJW04_16300 IPR002372 Pyrrolo-quinoline quinone repeat PJW04_16300 IPR001479 Quinoprotein dehydrogenase, conserved site PJW04_16305 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding PJW04_16305 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PJW04_16305 IPR003660 HAMP domain PJW04_16305 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site PJW04_16305 IPR004090 Chemotaxis methyl-accepting receptor PJW04_16305 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily PJW04_16310 IPR007263 Protein of unknown function DUF393 PJW04_16320 IPR003730 Multi-copper polyphenol oxidoreductase PJW04_16320 IPR011324 Cytotoxic necrotizing factor-like, catalytic PJW04_16320 IPR038371 Multi-copper polyphenol oxidoreductase superfamily PJW04_16325 IPR006225 Pseudouridine synthase, RluC/RluD PJW04_16325 IPR020103 Pseudouridine synthase, catalytic domain superfamily PJW04_16325 IPR036986 RNA-binding S4 domain superfamily PJW04_16325 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site PJW04_16325 IPR002942 RNA-binding S4 domain PJW04_16325 IPR006145 Pseudouridine synthase, RsuA/RluA PJW04_16330 IPR017689 Outer membrane protein assembly factor BamD PJW04_16330 IPR039565 Outer membrane lipoprotein BamD-like PJW04_16330 IPR011990 Tetratricopeptide-like helical domain superfamily PJW04_16340 IPR003010 Carbon-nitrogen hydrolase PJW04_16340 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PJW04_16340 IPR000132 Nitrilase/cyanide hydratase, conserved site PJW04_16340 IPR003694 NAD(+) synthetase PJW04_16340 IPR022310 NAD/GMP synthase PJW04_16340 IPR014445 Glutamine-dependent NAD(+) synthetase PJW04_16340 IPR036526 Carbon-nitrogen hydrolase superfamily PJW04_16355 IPR005811 ATP-citrate lyase/succinyl-CoA ligase PJW04_16355 IPR005810 Succinyl-CoA ligase, alpha subunit PJW04_16355 IPR003781 CoA-binding PJW04_16355 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site PJW04_16355 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site PJW04_16355 IPR016102 Succinyl-CoA synthetase-like PJW04_16355 IPR036291 NAD(P)-binding domain superfamily PJW04_16360 IPR011761 ATP-grasp fold PJW04_16360 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type PJW04_16360 IPR013815 ATP-grasp fold, subdomain 1 PJW04_16360 IPR005811 ATP-citrate lyase/succinyl-CoA ligase PJW04_16360 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site PJW04_16360 IPR005809 Succinate--CoA synthetase, beta subunit PJW04_16360 IPR016102 Succinyl-CoA synthetase-like PJW04_16365 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_16365 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_16365 IPR005467 Histidine kinase domain PJW04_16365 IPR000014 PAS domain PJW04_16365 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PJW04_16365 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW04_16365 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PJW04_16370 IPR001789 Signal transduction response regulator, receiver domain PJW04_16370 IPR003593 AAA+ ATPase domain PJW04_16370 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_16370 IPR002197 DNA binding HTH domain, Fis-type PJW04_16370 IPR009057 Homeobox-like domain superfamily PJW04_16370 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PJW04_16370 IPR011006 CheY-like superfamily PJW04_16370 IPR002078 RNA polymerase sigma factor 54 interaction domain PJW04_16370 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PJW04_16370 IPR025944 Sigma-54 interaction domain, conserved site PJW04_16390 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase PJW04_16390 IPR001173 Glycosyltransferase 2-like PJW04_16390 IPR029044 Nucleotide-diphospho-sugar transferases PJW04_16395 IPR001296 Glycosyl transferase, family 1 PJW04_16415 IPR001082 Fimbrial protein pilin PJW04_16415 IPR012902 Prokaryotic N-terminal methylation site PJW04_16420 IPR001082 Fimbrial protein pilin PJW04_16420 IPR012902 Prokaryotic N-terminal methylation site PJW04_16420 IPR000983 Bacterial general secretion pathway protein G-type pilin PJW04_16425 IPR018076 Type II secretion system F domain PJW04_16425 IPR042094 Type II secretion system F domain superfamily PJW04_16425 IPR001992 Type II secretion system conserved site PJW04_16425 IPR003004 GspF/PilC family PJW04_16430 IPR000045 Prepilin type IV endopeptidase, peptidase domain PJW04_16430 IPR010627 Peptidase A24A, N-terminal PJW04_16430 IPR014032 Peptidase A24A, prepilin type IV, bacterial PJW04_16435 IPR001977 Dephospho-CoA kinase PJW04_16435 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_16440 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR PJW04_16440 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW04_16440 IPR021766 Phosphate regulon sensor protein PhoR PJW04_16440 IPR013767 PAS fold PJW04_16440 IPR035965 PAS domain superfamily PJW04_16440 IPR000014 PAS domain PJW04_16440 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PJW04_16440 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_16440 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_16440 IPR005467 Histidine kinase domain PJW04_16440 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PJW04_16445 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_16445 IPR039420 Transcriptional regulatory protein WalR-like PJW04_16445 IPR001789 Signal transduction response regulator, receiver domain PJW04_16445 IPR001867 OmpR/PhoB-type DNA-binding domain PJW04_16445 IPR011006 CheY-like superfamily PJW04_16455 IPR041107 RimK, PreATP-grasp domain PJW04_16455 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK PJW04_16455 IPR013815 ATP-grasp fold, subdomain 1 PJW04_16455 IPR013651 ATP-grasp fold, RimK-type PJW04_16455 IPR011761 ATP-grasp fold PJW04_16455 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX PJW04_16460 IPR017853 Glycoside hydrolase superfamily PJW04_16460 IPR013783 Immunoglobulin-like fold PJW04_16460 IPR006047 Glycosyl hydrolase, family 13, catalytic domain PJW04_16460 IPR014756 Immunoglobulin E-set PJW04_16460 IPR013780 Glycosyl hydrolase, all-beta PJW04_16460 IPR004193 Glycoside hydrolase, family 13, N-terminal PJW04_16460 IPR011837 Glycogen debranching enzyme, GlgX type PJW04_16485 IPR036709 Autotransporter beta-domain superfamily PJW04_16485 IPR001087 GDSL lipase/esterase PJW04_16485 IPR017186 Lipase, autotransporter EstA PJW04_16485 IPR008265 Lipase, GDSL, active site PJW04_16485 IPR006315 Outer membrane autotransporter barrel PJW04_16485 IPR036514 SGNH hydrolase superfamily PJW04_16485 IPR005546 Autotransporter beta-domain PJW04_16495 IPR033983 Thiazole synthase ThiG PJW04_16495 IPR008867 Thiazole synthase PJW04_16495 IPR013785 Aldolase-type TIM barrel PJW04_16500 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW04_16500 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type PJW04_16505 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily PJW04_16505 IPR006037 Regulator of K+ conductance, C-terminal PJW04_16505 IPR004680 Citrate transporter-like domain PJW04_16505 IPR031312 Sodium/sulphate symporter, conserved site PJW04_16520 IPR011234 Fumarylacetoacetase-like, C-terminal PJW04_16520 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily PJW04_16525 IPR036019 Gated mechanosensitive channel PJW04_16525 IPR019823 Large-conductance mechanosensitive channel, conserved site PJW04_16525 IPR001185 Large-conductance mechanosensitive channel PJW04_16525 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L PJW04_16535 IPR028082 Periplasmic binding protein-like I PJW04_16535 IPR000843 LacI-type HTH domain PJW04_16535 IPR010982 Lambda repressor-like, DNA-binding domain superfamily PJW04_16535 IPR023588 Transcription regulator HTH, PurR PJW04_16545 IPR013783 Immunoglobulin-like fold PJW04_16545 IPR017853 Glycoside hydrolase superfamily PJW04_16545 IPR006104 Glycosyl hydrolases family 2, sugar binding domain PJW04_16545 IPR008979 Galactose-binding-like domain superfamily PJW04_16545 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich PJW04_16545 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily PJW04_16545 IPR041351 Exo-beta-D-glucosaminidase, Ig-fold domain PJW04_16545 IPR028829 Exo-beta-D-glucosaminidase PJW04_16550 IPR019563 Glycosyl-hydrolase 97, catalytic domain PJW04_16550 IPR029486 Glycosyl-hydrolase 97, N-terminal domain PJW04_16550 IPR017853 Glycoside hydrolase superfamily PJW04_16550 IPR029483 Glycosyl-hydrolase 97, C-terminal oligomerisation domain PJW04_16550 IPR013780 Glycosyl hydrolase, all-beta PJW04_16550 IPR013785 Aldolase-type TIM barrel PJW04_16550 IPR014718 Glycoside hydrolase-type carbohydrate-binding PJW04_16565 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PJW04_16565 IPR013123 RNA 2-O ribose methyltransferase, substrate binding PJW04_16565 IPR001537 tRNA/rRNA methyltransferase, SpoU type PJW04_16565 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB PJW04_16565 IPR029028 Alpha/beta knot methyltransferases PJW04_16565 IPR029064 50S ribosomal protein L30e-like PJW04_16565 IPR004441 RNA methyltransferase TrmH family PJW04_16580 IPR034016 Aminopeptidase N-type PJW04_16580 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase PJW04_16580 IPR042097 Aminopeptidase N-like , N-terminal PJW04_16580 IPR014782 Peptidase M1, membrane alanine aminopeptidase PJW04_16580 IPR024571 ERAP1-like C-terminal domain PJW04_16585 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PJW04_16585 IPR001036 Acriflavin resistance protein PJW04_16590 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PJW04_16590 IPR006143 RND efflux pump, membrane fusion protein PJW04_16600 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal PJW04_16600 IPR009000 Translation protein, beta-barrel domain superfamily PJW04_16600 IPR000795 Transcription factor, GTP-binding domain PJW04_16600 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_16600 IPR031157 Tr-type G domain, conserved site PJW04_16600 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain PJW04_16600 IPR011779 Sulphate adenylyltransferase, large subunit PJW04_16600 IPR002891 Adenylyl-sulfate kinase PJW04_16605 IPR002500 Phosphoadenosine phosphosulphate reductase PJW04_16605 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PJW04_16605 IPR011784 Sulphate adenylyltransferase, small subunit PJW04_16610 IPR001094 Flavodoxin-like PJW04_16610 IPR029039 Flavoprotein-like superfamily PJW04_16610 IPR008254 Flavodoxin/nitric oxide synthase PJW04_16610 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase PJW04_16610 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria PJW04_16610 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PJW04_16610 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily PJW04_16610 IPR001433 Oxidoreductase FAD/NAD(P)-binding PJW04_16610 IPR017938 Riboflavin synthase-like beta-barrel PJW04_16610 IPR017927 FAD-binding domain, ferredoxin reductase-type PJW04_16610 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain PJW04_16610 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding PJW04_16615 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily PJW04_16615 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain PJW04_16615 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain PJW04_16615 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site PJW04_16615 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit PJW04_16620 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase PJW04_16620 IPR002500 Phosphoadenosine phosphosulphate reductase PJW04_16620 IPR011800 Phosphoadenosine phosphosulphate reductase CysH PJW04_16620 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PJW04_16640 IPR001789 Signal transduction response regulator, receiver domain PJW04_16640 IPR011006 CheY-like superfamily PJW04_16640 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_16640 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_16640 IPR005467 Histidine kinase domain PJW04_16640 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PJW04_16640 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PJW04_16640 IPR036641 HPT domain superfamily PJW04_16640 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW04_16640 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain PJW04_16660 IPR036390 Winged helix DNA-binding domain superfamily PJW04_16660 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_16660 IPR005119 LysR, substrate-binding PJW04_16660 IPR000847 Transcription regulator HTH, LysR PJW04_16665 IPR000878 Tetrapyrrole methylase PJW04_16665 IPR035996 Tetrapyrrole methylase superfamily PJW04_16665 IPR014777 Tetrapyrrole methylase, subdomain 1 PJW04_16665 IPR014776 Tetrapyrrole methylase, subdomain 2 PJW04_16665 IPR006366 Uroporphyrin-III C-methyltransferase PJW04_16665 IPR036291 NAD(P)-binding domain superfamily PJW04_16665 IPR012409 Sirohaem synthase PJW04_16665 IPR028281 Siroheme synthase, central domain PJW04_16665 IPR019478 Sirohaem synthase, dimerisation domain PJW04_16665 IPR006367 Sirohaem synthase, N-terminal PJW04_16665 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site PJW04_16670 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme PJW04_16670 IPR001926 Pyridoxal-phosphate dependent enzyme PJW04_16670 IPR005859 Cysteine synthase CysK PJW04_16670 IPR005856 Cysteine synthase PJW04_16670 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site PJW04_16680 IPR002589 Macro domain PJW04_16685 IPR029768 Fructose-bisphosphate aldolase class-I active site PJW04_16685 IPR013785 Aldolase-type TIM barrel PJW04_16685 IPR000741 Fructose-bisphosphate aldolase, class-I PJW04_16690 IPR015806 Pyruvate kinase, insert domain superfamily PJW04_16690 IPR036918 Pyruvate kinase, C-terminal domain superfamily PJW04_16690 IPR015795 Pyruvate kinase, C-terminal PJW04_16690 IPR015793 Pyruvate kinase, barrel PJW04_16690 IPR040442 Pyruvate kinase-like domain superfamily PJW04_16690 IPR011037 Pyruvate kinase-like, insert domain superfamily PJW04_16690 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily PJW04_16690 IPR001697 Pyruvate kinase PJW04_16690 IPR018209 Pyruvate kinase, active site PJW04_16695 IPR023198 Phosphoglycolate phosphatase-like, domain 2 PJW04_16695 IPR023214 HAD superfamily PJW04_16695 IPR041492 Haloacid dehalogenase-like hydrolase PJW04_16695 IPR036412 HAD-like superfamily PJW04_16700 IPR001576 Phosphoglycerate kinase PJW04_16700 IPR015911 Phosphoglycerate kinase, conserved site PJW04_16700 IPR015824 Phosphoglycerate kinase, N-terminal PJW04_16700 IPR036043 Phosphoglycerate kinase superfamily PJW04_16720 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family PJW04_16720 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site PJW04_16720 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain PJW04_16720 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain PJW04_16720 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I PJW04_16720 IPR036291 NAD(P)-binding domain superfamily PJW04_16730 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel PJW04_16730 IPR005618 Outer membrane protein, OmpW PJW04_16735 IPR005618 Outer membrane protein, OmpW PJW04_16735 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel PJW04_16750 IPR005950 Molybdate ABC transporter, substrate-binding protein PJW04_16755 IPR000515 ABC transporter type 1, transmembrane domain MetI-like PJW04_16755 IPR035906 MetI-like superfamily PJW04_16755 IPR011867 Molybdate ABC transporter, permease protein PJW04_16760 IPR003593 AAA+ ATPase domain PJW04_16760 IPR003439 ABC transporter-like PJW04_16760 IPR017871 ABC transporter, conserved site PJW04_16760 IPR015852 ABC transporter, molybdenum import, ModC PJW04_16760 IPR008995 Molybdate/tungstate binding, C-terminal PJW04_16760 IPR011868 Molybdate ABC transporter, ATP-binding protein PJW04_16760 IPR004606 Molybdenum-pterin binding PJW04_16760 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_16760 IPR005116 Transport-associated OB, type 1 PJW04_16795 IPR036779 LysM domain superfamily PJW04_16795 IPR038063 L,D-transpeptidase catalytic domain-like PJW04_16795 IPR005490 L,D-transpeptidase catalytic domain PJW04_16795 IPR018392 LysM domain PJW04_16800 IPR011055 Duplicated hybrid motif PJW04_16800 IPR007340 Opacity-associated protein A PJW04_16800 IPR016047 Peptidase M23 PJW04_16805 IPR010917 TonB-dependent receptor, conserved site PJW04_16805 IPR010105 TonB-dependent siderophore receptor PJW04_16805 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PJW04_16805 IPR010916 TonB box, conserved site PJW04_16805 IPR000531 TonB-dependent receptor-like, beta-barrel PJW04_16805 IPR037066 TonB-dependent receptor, plug domain superfamily PJW04_16805 IPR012910 TonB-dependent receptor, plug domain PJW04_16805 IPR039423 TonB-dependent receptor-like PJW04_16810 IPR033247 Transketolase family PJW04_16810 IPR033248 Transketolase, C-terminal domain PJW04_16810 IPR005474 Transketolase, N-terminal PJW04_16810 IPR020826 Transketolase binding site PJW04_16810 IPR005478 Transketolase, bacterial-like PJW04_16810 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II PJW04_16810 IPR029061 Thiamin diphosphate-binding fold PJW04_16810 IPR005475 Transketolase-like, pyrimidine-binding domain PJW04_16815 IPR001991 Sodium:dicarboxylate symporter PJW04_16815 IPR036458 Sodium:dicarboxylate symporter superfamily PJW04_16815 IPR034703 Proton/glutamate-aspartate symporter GltP PJW04_16815 IPR033380 Glutamate-aspartate symport protein GltP/GltT PJW04_16815 IPR018107 Sodium:dicarboxylate symporter, conserved site PJW04_16825 IPR024163 Aerotolerance regulator, N-terminal PJW04_16825 IPR036465 von Willebrand factor A-like domain superfamily PJW04_16825 IPR002035 von Willebrand factor, type A PJW04_16825 IPR022933 Uncharacterised protein family UPF0353 PJW04_16845 IPR041628 ChlI/MoxR, AAA lid domain PJW04_16845 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_16845 IPR011703 ATPase, AAA-3 PJW04_16850 IPR013355 Type IV pilus secretin PilQ PJW04_16850 IPR001775 GspD/PilQ family PJW04_16850 IPR005644 NolW-like PJW04_16850 IPR038591 NolW-like superfamily PJW04_16850 IPR011662 Secretin/TonB, short N-terminal domain PJW04_16850 IPR004846 Type II/III secretion system PJW04_16850 IPR004845 Type II secretion system GspD, conserved site PJW04_16850 IPR021731 AMIN domain PJW04_16855 IPR007446 Pilus assembly protein PilP PJW04_16860 IPR007445 Pilus assembly protein, PilO PJW04_16860 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 PJW04_16865 IPR007813 Fimbrial assembly PilN PJW04_16870 IPR005883 Type IV pilus assembly protein PilM PJW04_16870 IPR003494 SHS2 domain inserted in FtsA PJW04_16875 IPR001460 Penicillin-binding protein, transpeptidase PJW04_16875 IPR036950 Penicillin binding protein transglycosylase domain PJW04_16875 IPR031376 Penicillin-binding protein, OB-like domain PJW04_16875 IPR001264 Glycosyl transferase, family 51 PJW04_16875 IPR012338 Beta-lactamase/transpeptidase-like PJW04_16875 IPR023346 Lysozyme-like domain superfamily PJW04_16885 IPR002020 Citrate synthase PJW04_16885 IPR019810 Citrate synthase active site PJW04_16885 IPR024176 Citrate synthase, bacterial-type PJW04_16885 IPR036969 Citrate synthase superfamily PJW04_16885 IPR010953 Citrate synthase, type I PJW04_16885 IPR016142 Citrate synthase-like, large alpha subdomain PJW04_16885 IPR016143 Citrate synthase-like, small alpha subdomain PJW04_16890 IPR042105 Ribosomal protein L31 superfamily PJW04_16890 IPR002150 Ribosomal protein L31 PJW04_16890 IPR034704 L28p-like PJW04_16890 IPR027493 Ribosomal protein L31 type B PJW04_16895 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site PJW04_16895 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain PJW04_16895 IPR023186 Inosine/uridine-preferring nucleoside hydrolase PJW04_16895 IPR022975 Pyrimidine-specific ribonucleoside hydrolase RihA PJW04_16895 IPR036452 Ribonucleoside hydrolase-like PJW04_16900 IPR033454 RecG, wedge domain PJW04_16900 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_16900 IPR012340 Nucleic acid-binding, OB-fold PJW04_16900 IPR014001 Helicase superfamily 1/2, ATP-binding domain PJW04_16900 IPR011545 DEAD/DEAH box helicase domain PJW04_16900 IPR004609 ATP-dependent DNA helicase RecG PJW04_16900 IPR001650 Helicase, C-terminal PJW04_16905 IPR006056 RidA family PJW04_16905 IPR019897 RidA, conserved site PJW04_16905 IPR035959 RutC-like superfamily PJW04_16905 IPR006175 YjgF/YER057c/UK114 family PJW04_16910 IPR033655 RelA, TGS domain PJW04_16910 IPR012676 TGS-like PJW04_16910 IPR004095 TGS PJW04_16910 IPR007685 RelA/SpoT PJW04_16910 IPR003607 HD/PDEase domain PJW04_16910 IPR012675 Beta-grasp domain superfamily PJW04_16910 IPR002912 ACT domain PJW04_16910 IPR004811 RelA/SpoT family PJW04_16915 IPR003716 DNA-directed RNA polymerase, omega subunit PJW04_16915 IPR006110 RNA polymerase, subunit omega/K/RPB6 PJW04_16915 IPR012293 RNA polymerase subunit, RPB6/omega PJW04_16915 IPR036161 RPB6/omega subunit-like superfamily PJW04_16920 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_16920 IPR008145 Guanylate kinase/L-type calcium channel beta subunit PJW04_16920 IPR017665 Guanylate kinase PJW04_16920 IPR008144 Guanylate kinase-like domain PJW04_16920 IPR020590 Guanylate kinase, conserved site PJW04_16925 IPR005229 Conserved hypothetical protein CHP00255 PJW04_16925 IPR013551 Domain of unknown function DUF1732 PJW04_16925 IPR013527 YicC-like, N-terminal PJW04_16930 IPR018336 Ribonuclease PH, conserved site PJW04_16930 IPR002381 Ribonuclease PH, bacterial-type PJW04_16930 IPR001247 Exoribonuclease, phosphorolytic domain 1 PJW04_16930 IPR027408 PNPase/RNase PH domain superfamily PJW04_16930 IPR036345 Exoribonuclease, PH domain 2 superfamily PJW04_16930 IPR015847 Exoribonuclease, phosphorolytic domain 2 PJW04_16930 IPR020568 Ribosomal protein S5 domain 2-type fold PJW04_16940 IPR020922 dITP/XTP pyrophosphatase PJW04_16940 IPR002637 Ham1-like protein PJW04_16940 IPR029001 Inosine triphosphate pyrophosphatase-like PJW04_16945 IPR023404 Radical SAM, alpha/beta horseshoe PJW04_16945 IPR007197 Radical SAM PJW04_16945 IPR010723 HemN, C-terminal PJW04_16945 IPR006638 Elp3/MiaB/NifB PJW04_16945 IPR034505 Anaerobic coproporphyrinogen-III oxidase PJW04_16945 IPR004559 Heme chaperone HemW-like PJW04_16960 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal PJW04_16960 IPR036005 Creatinase/aminopeptidase-like PJW04_16960 IPR000994 Peptidase M24 PJW04_16960 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site PJW04_16960 IPR022846 Xaa-Pro dipeptidase PJW04_16970 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site PJW04_16970 IPR001714 Peptidase M24, methionine aminopeptidase PJW04_16970 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal PJW04_16970 IPR036005 Creatinase/aminopeptidase-like PJW04_16970 IPR007865 Aminopeptidase P, N-terminal PJW04_16970 IPR000994 Peptidase M24 PJW04_16975 IPR011978 Uncharacterised protein family UPF0149 PJW04_16975 IPR036255 YgfB-like superfamily PJW04_16985 IPR036192 Cell division protein ZapA-like superfamily PJW04_16985 IPR007838 Cell division protein ZapA-like PJW04_16995 IPR002698 5-formyltetrahydrofolate cyclo-ligase PJW04_16995 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily PJW04_16995 IPR037171 NagB/RpiA transferase-like PJW04_17005 IPR037171 NagB/RpiA transferase-like PJW04_17005 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup PJW04_17005 IPR004788 Ribose 5-phosphate isomerase, type A PJW04_17015 IPR019734 Tetratricopeptide repeat PJW04_17015 IPR011990 Tetratricopeptide-like helical domain superfamily PJW04_17015 IPR013026 Tetratricopeptide repeat-containing domain PJW04_17015 IPR032698 Protein SirB1, N-terminal PJW04_17020 IPR024922 Rubredoxin PJW04_17020 IPR024934 Rubredoxin-like domain PJW04_17020 IPR024935 Rubredoxin domain PJW04_17020 IPR018527 Rubredoxin, iron-binding site PJW04_17025 IPR013785 Aldolase-type TIM barrel PJW04_17025 IPR036206 Thiamin phosphate synthase superfamily PJW04_17025 IPR034291 Thiamine phosphate synthase PJW04_17025 IPR022998 Thiamine phosphate synthase/TenI PJW04_17035 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase PJW04_17035 IPR005814 Aminotransferase class-III PJW04_17035 IPR015424 Pyridoxal phosphate-dependent transferase PJW04_17035 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PJW04_17035 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PJW04_17045 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_17045 IPR000792 Transcription regulator LuxR, C-terminal PJW04_17045 IPR023768 Transcriptional regulator HTH-type, MalT PJW04_17045 IPR041617 MalT-like TPR region PJW04_17045 IPR016032 Signal transduction response regulator, C-terminal effector PJW04_17045 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_17045 IPR011990 Tetratricopeptide-like helical domain superfamily PJW04_17050 IPR014068 Azurin PJW04_17050 IPR000923 Blue (type 1) copper domain PJW04_17050 IPR028871 Blue (type 1) copper protein, binding site PJW04_17050 IPR008972 Cupredoxin PJW04_17055 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PJW04_17055 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PJW04_17055 IPR015424 Pyridoxal phosphate-dependent transferase PJW04_17055 IPR005861 Histidinol-phosphate aminotransferase family PJW04_17055 IPR004839 Aminotransferase, class I/classII PJW04_17065 IPR036909 Cytochrome c-like domain superfamily PJW04_17065 IPR009056 Cytochrome c-like domain PJW04_17065 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit PJW04_17070 IPR036188 FAD/NAD(P)-binding domain superfamily PJW04_17070 IPR002937 Amine oxidase PJW04_17070 IPR014105 Carotenoid/retinoid oxidoreductase PJW04_17085 IPR004636 Acetylornithine/Succinylornithine transaminase family PJW04_17085 IPR005814 Aminotransferase class-III PJW04_17085 IPR015424 Pyridoxal phosphate-dependent transferase PJW04_17085 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PJW04_17085 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PJW04_17090 IPR014710 RmlC-like jelly roll fold PJW04_17090 IPR018490 Cyclic nucleotide-binding-like PJW04_17090 IPR018488 Cyclic nucleotide-binding, conserved site PJW04_17090 IPR005821 Ion transport domain PJW04_17090 IPR028325 Voltage-gated potassium channel PJW04_17090 IPR000595 Cyclic nucleotide-binding domain PJW04_17095 IPR002347 Short-chain dehydrogenase/reductase SDR PJW04_17095 IPR020904 Short-chain dehydrogenase/reductase, conserved site PJW04_17095 IPR036291 NAD(P)-binding domain superfamily PJW04_17105 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily PJW04_17105 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PJW04_17110 IPR021134 Bestrophin/UPF0187 PJW04_17120 IPR000713 Mur ligase, N-terminal catalytic domain PJW04_17120 IPR013221 Mur ligase, central PJW04_17120 IPR036615 Mur ligase, C-terminal domain superfamily PJW04_17120 IPR004101 Mur ligase, C-terminal PJW04_17120 IPR036565 Mur-like, catalytic domain superfamily PJW04_17120 IPR005757 Murein peptide ligase PJW04_17125 IPR033690 Adenylate kinase, conserved site PJW04_17125 IPR000850 Adenylate kinase/UMP-CMP kinase PJW04_17125 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_17130 IPR022953 ATP-dependent 6-phosphofructokinase PJW04_17130 IPR000023 Phosphofructokinase domain PJW04_17130 IPR035966 Phosphofructokinase superfamily PJW04_17130 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 PJW04_17140 IPR004131 Pyrophosphate-energised proton pump PJW04_17150 IPR008162 Inorganic pyrophosphatase PJW04_17150 IPR036649 Inorganic pyrophosphatase superfamily PJW04_17160 IPR010916 TonB box, conserved site PJW04_17160 IPR000531 TonB-dependent receptor-like, beta-barrel PJW04_17160 IPR037066 TonB-dependent receptor, plug domain superfamily PJW04_17160 IPR012910 TonB-dependent receptor, plug domain PJW04_17160 IPR039426 Vitamin B12 transporter BtuB-like PJW04_17160 IPR010101 TonB-dependent vitamin B12 transporter BtuB PJW04_17160 IPR010917 TonB-dependent receptor, conserved site PJW04_17160 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PJW04_17165 IPR020449 Transcription regulator HTH, AraC- type PJW04_17165 IPR018062 HTH domain AraC-type, conserved site PJW04_17165 IPR018060 DNA binding HTH domain, AraC-type PJW04_17165 IPR009057 Homeobox-like domain superfamily PJW04_17165 IPR029062 Class I glutamine amidotransferase-like PJW04_17170 IPR016032 Signal transduction response regulator, C-terminal effector PJW04_17170 IPR011990 Tetratricopeptide-like helical domain superfamily PJW04_17170 IPR001867 OmpR/PhoB-type DNA-binding domain PJW04_17170 IPR040970 CadC C-terminal domain 1 PJW04_17170 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_17170 IPR039420 Transcriptional regulatory protein WalR-like PJW04_17175 IPR037509 Phosphomethylpyrimidine synthase PJW04_17175 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B PJW04_17175 IPR038521 ThiC/Bza superfamily PJW04_17175 IPR025747 ThiC-associated domain PJW04_17180 IPR012910 TonB-dependent receptor, plug domain PJW04_17180 IPR000531 TonB-dependent receptor-like, beta-barrel PJW04_17180 IPR037066 TonB-dependent receptor, plug domain superfamily PJW04_17180 IPR039426 Vitamin B12 transporter BtuB-like PJW04_17180 IPR010101 TonB-dependent vitamin B12 transporter BtuB PJW04_17180 IPR010916 TonB box, conserved site PJW04_17180 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PJW04_17180 IPR010917 TonB-dependent receptor, conserved site PJW04_17185 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PJW04_17185 IPR003660 HAMP domain PJW04_17185 IPR004090 Chemotaxis methyl-accepting receptor PJW04_17190 IPR000101 Gamma-glutamyltranspeptidase PJW04_17190 IPR029055 Nucleophile aminohydrolases, N-terminal PJW04_17195 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily PJW04_17195 IPR014359 Ketol-acid reductoisomerase, prokaryotic PJW04_17195 IPR036291 NAD(P)-binding domain superfamily PJW04_17195 IPR013116 Ketol-acid reductoisomerase, N-terminal PJW04_17195 IPR000506 Ketol-acid reductoisomerase, C-terminal PJW04_17195 IPR013023 Ketol-acid reductoisomerase PJW04_17200 IPR000399 TPP-binding enzyme, conserved site PJW04_17200 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding PJW04_17200 IPR012846 Acetolactate synthase, large subunit, biosynthetic PJW04_17200 IPR029035 DHS-like NAD/FAD-binding domain superfamily PJW04_17200 IPR012000 Thiamine pyrophosphate enzyme, central domain PJW04_17200 IPR039368 Acetolactate synthase large subunit, TPP binding domain PJW04_17200 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain PJW04_17200 IPR029061 Thiamin diphosphate-binding fold PJW04_17210 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme PJW04_17210 IPR001926 Pyridoxal-phosphate dependent enzyme PJW04_17210 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site PJW04_17210 IPR005789 Threonine dehydratase, catabolic PJW04_17215 IPR005671 2-isopropylmalate synthase, bacterial-type PJW04_17215 IPR013785 Aldolase-type TIM barrel PJW04_17215 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site PJW04_17215 IPR000891 Pyruvate carboxyltransferase PJW04_17215 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily PJW04_17215 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain PJW04_17220 IPR024084 Isopropylmalate dehydrogenase-like domain PJW04_17220 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site PJW04_17220 IPR004429 Isopropylmalate dehydrogenase PJW04_17225 IPR004431 3-isopropylmalate dehydratase, small subunit PJW04_17225 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel PJW04_17225 IPR033940 3-isopropylmalate dehydratase, swivel domain PJW04_17225 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain PJW04_17230 IPR004430 3-isopropylmalate dehydratase, large subunit PJW04_17230 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 PJW04_17230 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain PJW04_17230 IPR018136 Aconitase family, 4Fe-4S cluster binding site PJW04_17230 IPR036008 Aconitase, iron-sulfur domain PJW04_17230 IPR033941 3-Isopropylmalate dehydratase, catalytic domain PJW04_17235 IPR000847 Transcription regulator HTH, LysR PJW04_17235 IPR036390 Winged helix DNA-binding domain superfamily PJW04_17235 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_17240 IPR000160 GGDEF domain PJW04_17240 IPR029787 Nucleotide cyclase PJW04_17250 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase PJW04_17250 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW04_17255 IPR003423 Outer membrane efflux protein PJW04_17255 IPR010130 Type I secretion outer membrane protein, TolC PJW04_17260 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal PJW04_17260 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily PJW04_17260 IPR039901 3-deoxy-D-manno-octulosonic acid transferase PJW04_17265 IPR004960 Bacterial lipid A biosynthesis acyltransferase PJW04_17265 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase PJW04_17290 IPR002505 Phosphate acetyl/butaryl transferase PJW04_17290 IPR042112 Phosphate acetyltransferase, domain 2 PJW04_17290 IPR036291 NAD(P)-binding domain superfamily PJW04_17290 IPR012188 NAD(P)-dependent malic enzyme PJW04_17290 IPR042113 Phosphate acetyltransferase, domain 1 PJW04_17290 IPR037062 Malic enzyme, N-terminal domain superfamily PJW04_17290 IPR012301 Malic enzyme, N-terminal domain PJW04_17290 IPR012302 Malic enzyme, NAD-binding PJW04_17290 IPR015884 Malic enzyme, conserved site PJW04_17295 IPR023954 C4-dicarboxylate transport protein PJW04_17295 IPR001991 Sodium:dicarboxylate symporter PJW04_17295 IPR018107 Sodium:dicarboxylate symporter, conserved site PJW04_17295 IPR036458 Sodium:dicarboxylate symporter superfamily PJW04_17305 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) PJW04_17305 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW04_17305 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PJW04_17305 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PJW04_17305 IPR005467 Histidine kinase domain PJW04_17305 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_17305 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_17305 IPR033479 Double Cache domain 1 PJW04_17305 IPR029151 Periplasmic sensor-like domain superfamily PJW04_17310 IPR020846 Major facilitator superfamily domain PJW04_17310 IPR011701 Major facilitator superfamily PJW04_17310 IPR004736 MFS transporter, metabolite:H symporter PJW04_17310 IPR036259 MFS transporter superfamily PJW04_17310 IPR005829 Sugar transporter, conserved site PJW04_17320 IPR005119 LysR, substrate-binding PJW04_17320 IPR000847 Transcription regulator HTH, LysR PJW04_17320 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_17320 IPR036390 Winged helix DNA-binding domain superfamily PJW04_17325 IPR023210 NADP-dependent oxidoreductase domain PJW04_17325 IPR036812 NADP-dependent oxidoreductase domain superfamily PJW04_17340 IPR011006 CheY-like superfamily PJW04_17340 IPR016032 Signal transduction response regulator, C-terminal effector PJW04_17340 IPR001789 Signal transduction response regulator, receiver domain PJW04_17340 IPR000792 Transcription regulator LuxR, C-terminal PJW04_17350 IPR013727 Two-component sensor kinase, N-terminal PJW04_17350 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_17350 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW04_17350 IPR005467 Histidine kinase domain PJW04_17350 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PJW04_17350 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PJW04_17350 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_17355 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_17355 IPR039420 Transcriptional regulatory protein WalR-like PJW04_17355 IPR001789 Signal transduction response regulator, receiver domain PJW04_17355 IPR001867 OmpR/PhoB-type DNA-binding domain PJW04_17355 IPR016032 Signal transduction response regulator, C-terminal effector PJW04_17355 IPR011006 CheY-like superfamily PJW04_17365 IPR014738 Citrate transporter PJW04_17365 IPR004680 Citrate transporter-like domain PJW04_17370 IPR011283 Acetoacetyl-CoA reductase PJW04_17370 IPR036291 NAD(P)-binding domain superfamily PJW04_17370 IPR020904 Short-chain dehydrogenase/reductase, conserved site PJW04_17370 IPR002347 Short-chain dehydrogenase/reductase SDR PJW04_17375 IPR000843 LacI-type HTH domain PJW04_17375 IPR010982 Lambda repressor-like, DNA-binding domain superfamily PJW04_17375 IPR028082 Periplasmic binding protein-like I PJW04_17375 IPR023588 Transcription regulator HTH, PurR PJW04_17380 IPR018043 Sodium:galactoside symporter, conserved site PJW04_17380 IPR039672 Lactose permease-like PJW04_17380 IPR036259 MFS transporter superfamily PJW04_17390 IPR013780 Glycosyl hydrolase, all-beta PJW04_17390 IPR017853 Glycoside hydrolase superfamily PJW04_17390 IPR006047 Glycosyl hydrolase, family 13, catalytic domain PJW04_17405 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain PJW04_17405 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_17405 IPR004881 Ribosome biogenesis GTPase RsgA PJW04_17405 IPR010914 RsgA GTPase domain PJW04_17410 IPR004839 Aminotransferase, class I/classII PJW04_17410 IPR015424 Pyridoxal phosphate-dependent transferase PJW04_17410 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PJW04_17410 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PJW04_17425 IPR002509 NodB homology domain PJW04_17425 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel PJW04_17425 IPR026402 Chitooligosaccharide deacetylase NodB PJW04_17430 IPR002109 Glutaredoxin PJW04_17430 IPR036249 Thioredoxin-like superfamily PJW04_17430 IPR033658 Glutaredoxin, PICOT-like PJW04_17430 IPR004480 Monothiol glutaredoxin-related PJW04_17430 IPR014434 Monothiol glutaredoxin PJW04_17445 IPR006680 Amidohydrolase-related PJW04_17445 IPR020043 Deacetylase Atu3266-like PJW04_17445 IPR011059 Metal-dependent hydrolase, composite domain superfamily PJW04_17445 IPR032466 Metal-dependent hydrolase PJW04_17450 IPR006680 Amidohydrolase-related PJW04_17450 IPR023512 Deaminase MtaD/DadD PJW04_17450 IPR011059 Metal-dependent hydrolase, composite domain superfamily PJW04_17450 IPR032466 Metal-dependent hydrolase PJW04_17470 IPR003797 DegV PJW04_17475 IPR023635 Peptide deformylase PJW04_17475 IPR036821 Peptide deformylase superfamily PJW04_17480 IPR006659 Arsenate reductase PJW04_17480 IPR036249 Thioredoxin-like superfamily PJW04_17480 IPR006660 Arsenate reductase-like PJW04_17495 IPR008410 Cellulose synthase operon C, C-terminal PJW04_17495 IPR003921 Cellulose synthase, subunit C PJW04_17495 IPR013026 Tetratricopeptide repeat-containing domain PJW04_17495 IPR011990 Tetratricopeptide-like helical domain superfamily PJW04_17495 IPR019734 Tetratricopeptide repeat PJW04_17500 IPR008928 Six-hairpin glycosidase superfamily PJW04_17500 IPR012341 Six-hairpin glycosidase-like superfamily PJW04_17500 IPR002037 Glycoside hydrolase, family 8 PJW04_17505 IPR008979 Galactose-binding-like domain superfamily PJW04_17505 IPR003920 Cellulose synthase, subunit B PJW04_17505 IPR018513 Cellulose synthase BcsB, bacterial PJW04_17510 IPR003919 Cellulose synthase, subunit A PJW04_17510 IPR009875 PilZ domain PJW04_17510 IPR029044 Nucleotide-diphospho-sugar transferases PJW04_17510 IPR001173 Glycosyltransferase 2-like PJW04_17510 IPR005150 Cellulose synthase PJW04_17525 IPR006406 Nicotinate phosphoribosyltransferase PJW04_17525 IPR007229 Nicotinate phosphoribosyltransferase family PJW04_17525 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain PJW04_17525 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase PJW04_17525 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal PJW04_17550 IPR029044 Nucleotide-diphospho-sugar transferases PJW04_17560 IPR010105 TonB-dependent siderophore receptor PJW04_17560 IPR010917 TonB-dependent receptor, conserved site PJW04_17560 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PJW04_17560 IPR010916 TonB box, conserved site PJW04_17560 IPR000531 TonB-dependent receptor-like, beta-barrel PJW04_17560 IPR037066 TonB-dependent receptor, plug domain superfamily PJW04_17560 IPR012910 TonB-dependent receptor, plug domain PJW04_17560 IPR030149 TonB-dependent siderophore receptor FcuA/FatA PJW04_17560 IPR039423 TonB-dependent receptor-like PJW04_17570 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily PJW04_17570 IPR000524 Transcription regulator HTH, GntR PJW04_17570 IPR017722 Phosphonate utilization transcriptional regulator PhnR PJW04_17570 IPR011663 UbiC transcription regulator-associated PJW04_17570 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_17570 IPR036390 Winged helix DNA-binding domain superfamily PJW04_17580 IPR013356 Type II secretion system GspD PJW04_17580 IPR004845 Type II secretion system GspD, conserved site PJW04_17580 IPR004846 Type II/III secretion system PJW04_17580 IPR005644 NolW-like PJW04_17580 IPR001775 GspD/PilQ family PJW04_17580 IPR038591 NolW-like superfamily PJW04_17590 IPR034756 Type II secretion system (T2SS), protein M subtype b PJW04_17595 IPR007813 Fimbrial assembly PilN PJW04_17600 IPR005628 General secretion pathway protein K PJW04_17600 IPR038072 GspK, central domain superfamily PJW04_17605 IPR012902 Prokaryotic N-terminal methylation site PJW04_17610 IPR012902 Prokaryotic N-terminal methylation site PJW04_17610 IPR010052 Type II secretion system protein I PJW04_17615 IPR022346 General secretion pathway, GspH PJW04_17615 IPR002416 Type II secretion system protein H PJW04_17620 IPR013545 Type II secretion system protein G PJW04_17620 IPR012902 Prokaryotic N-terminal methylation site PJW04_17620 IPR000983 Bacterial general secretion pathway protein G-type pilin PJW04_17620 IPR010054 General secretion pathway protein G PJW04_17625 IPR018076 Type II secretion system F domain PJW04_17625 IPR042094 Type II secretion system F domain superfamily PJW04_17625 IPR001992 Type II secretion system conserved site PJW04_17625 IPR003004 GspF/PilC family PJW04_17630 IPR042181 Type II secretion system, protein E, N-terminal PJW04_17630 IPR001482 Type II/IV secretion system protein PJW04_17630 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_17630 IPR003593 AAA+ ATPase domain PJW04_17630 IPR013369 Type II secretion system GspE PJW04_17630 IPR007831 General secretory system II, protein E, N-terminal PJW04_17630 IPR037257 General secretory system II, protein E, N-terminal superfamily PJW04_17635 IPR036852 Peptidase S8/S53 domain superfamily PJW04_17635 IPR034176 Peptidase MprA-like catalytic domain PJW04_17635 IPR015500 Peptidase S8, subtilisin-related PJW04_17635 IPR023828 Peptidase S8, subtilisin, Ser-active site PJW04_17635 IPR022398 Peptidase S8, subtilisin, His-active site PJW04_17635 IPR007280 Peptidase, C-terminal, archaeal/bacterial PJW04_17635 IPR023827 Peptidase S8, subtilisin, Asp-active site PJW04_17635 IPR000209 Peptidase S8/S53 domain PJW04_17640 IPR011049 Serralysin-like metalloprotease, C-terminal PJW04_17640 IPR005594 YadA-like, C-terminal PJW04_17640 IPR024973 ESPR domain PJW04_17640 IPR008635 Coiled stalk of trimeric autotransporter adhesin PJW04_17640 IPR008640 Head domain of trimeric autotransporter adhesin PJW04_17645 IPR036852 Peptidase S8/S53 domain superfamily PJW04_17645 IPR023827 Peptidase S8, subtilisin, Asp-active site PJW04_17645 IPR015500 Peptidase S8, subtilisin-related PJW04_17645 IPR023828 Peptidase S8, subtilisin, Ser-active site PJW04_17645 IPR007280 Peptidase, C-terminal, archaeal/bacterial PJW04_17645 IPR000209 Peptidase S8/S53 domain PJW04_17645 IPR022398 Peptidase S8, subtilisin, His-active site PJW04_17645 IPR034176 Peptidase MprA-like catalytic domain PJW04_17650 IPR011049 Serralysin-like metalloprotease, C-terminal PJW04_17650 IPR008640 Head domain of trimeric autotransporter adhesin PJW04_17650 IPR008635 Coiled stalk of trimeric autotransporter adhesin PJW04_17650 IPR024973 ESPR domain PJW04_17650 IPR005594 YadA-like, C-terminal PJW04_17655 IPR036676 PurM-like, C-terminal domain superfamily PJW04_17655 IPR010918 PurM-like, C-terminal domain PJW04_17655 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain PJW04_17655 IPR010073 Phosphoribosylformylglycinamidine synthase PurL PJW04_17655 IPR029062 Class I glutamine amidotransferase-like PJW04_17655 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal PJW04_17655 IPR036921 PurM-like, N-terminal domain superfamily PJW04_17655 IPR017926 Glutamine amidotransferase PJW04_17655 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily PJW04_17660 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal PJW04_17660 IPR036249 Thioredoxin-like superfamily PJW04_17660 IPR017937 Thioredoxin, conserved site PJW04_17660 IPR033954 Disulphide bond isomerase, DsbC/G PJW04_17660 IPR013766 Thioredoxin domain PJW04_17660 IPR012336 Thioredoxin-like fold PJW04_17660 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily PJW04_17665 IPR010998 Integrase/recombinase, N-terminal PJW04_17665 IPR004107 Integrase, SAM-like, N-terminal PJW04_17665 IPR011932 Tyrosine recombinase XerD PJW04_17665 IPR023009 Tyrosine recombinase XerC/XerD PJW04_17665 IPR011010 DNA breaking-rejoining enzyme, catalytic core PJW04_17665 IPR013762 Integrase-like, catalytic domain superfamily PJW04_17665 IPR002104 Integrase, catalytic domain PJW04_17680 IPR005495 Permease LptG/LptF-related PJW04_17680 IPR030923 LPS export ABC transporter permease LptG PJW04_17690 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B PJW04_17690 IPR023042 Peptidase M17, leucine aminopeptidase PJW04_17690 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal PJW04_17690 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal PJW04_17705 IPR002300 Aminoacyl-tRNA synthetase, class Ia PJW04_17705 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site PJW04_17705 IPR033705 Valyl tRNA synthetase, anticodon-binding domain PJW04_17705 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding PJW04_17705 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PJW04_17705 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm PJW04_17705 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily PJW04_17705 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm PJW04_17705 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain PJW04_17705 IPR002303 Valine-tRNA ligase PJW04_17705 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding PJW04_17710 IPR012910 TonB-dependent receptor, plug domain PJW04_17710 IPR039426 Vitamin B12 transporter BtuB-like PJW04_17710 IPR037066 TonB-dependent receptor, plug domain superfamily PJW04_17710 IPR010917 TonB-dependent receptor, conserved site PJW04_17710 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PJW04_17710 IPR010916 TonB box, conserved site PJW04_17710 IPR000531 TonB-dependent receptor-like, beta-barrel PJW04_17710 IPR010101 TonB-dependent vitamin B12 transporter BtuB PJW04_17715 IPR023346 Lysozyme-like domain superfamily PJW04_17715 IPR023664 Murein transglycosylase-C PJW04_17715 IPR024570 Murein transglycosylase-C, N-terminal PJW04_17715 IPR000189 Prokaryotic transglycosylase, active site PJW04_17715 IPR008258 Transglycosylase SLT domain 1 PJW04_17720 IPR002022 Pectate lyase PJW04_17720 IPR012334 Pectin lyase fold PJW04_17720 IPR011050 Pectin lyase fold/virulence factor PJW04_17735 IPR000462 CDP-alcohol phosphatidyltransferase PJW04_17735 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase PJW04_17745 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) PJW04_17745 IPR006195 Aminoacyl-tRNA synthetase, class II PJW04_17745 IPR004154 Anticodon-binding PJW04_17745 IPR036621 Anticodon-binding domain superfamily PJW04_17745 IPR002316 Proline-tRNA ligase, class IIa PJW04_17745 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type PJW04_17745 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 PJW04_17745 IPR033730 Prokaryote proline-tRNA ligase core domain PJW04_17745 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily PJW04_17745 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain PJW04_17750 IPR027444 Histone-like protein H-NS, C-terminal domain PJW04_17750 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily PJW04_17750 IPR001801 Histone-like protein H-NS PJW04_17760 IPR003453 ABC transport permease subunit MlaE, Proteobacteria PJW04_17760 IPR030802 ABC transporter permease MalE PJW04_17765 IPR003439 ABC transporter-like PJW04_17765 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_17765 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl PJW04_17765 IPR003593 AAA+ ATPase domain PJW04_17765 IPR017871 ABC transporter, conserved site PJW04_17770 IPR003399 Mce/MlaD PJW04_17770 IPR005586 ABC-type transport auxiliary lipoprotein component PJW04_17785 IPR036188 FAD/NAD(P)-binding domain superfamily PJW04_17785 IPR040156 Electron transfer flavoprotein-ubiquinone oxidoreductase PJW04_17785 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PJW04_17790 IPR032719 Glycosyltransferase WbsX PJW04_17790 IPR007739 Rhamnan synthesis F PJW04_17795 IPR037171 NagB/RpiA transferase-like PJW04_17795 IPR004164 Coenzyme A transferase active site PJW04_17795 IPR004165 Coenzyme A transferase family I PJW04_17795 IPR012791 3-oxoacid CoA-transferase, subunit B PJW04_17800 IPR004165 Coenzyme A transferase family I PJW04_17800 IPR012792 3-oxoacid CoA-transferase, subunit A PJW04_17800 IPR004163 Coenzyme A transferase binding site PJW04_17800 IPR037171 NagB/RpiA transferase-like PJW04_17805 IPR016066 Alpha-D-phosphohexomutase, conserved site PJW04_17805 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I PJW04_17805 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III PJW04_17805 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II PJW04_17805 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily PJW04_17805 IPR005843 Alpha-D-phosphohexomutase, C-terminal PJW04_17805 IPR005841 Alpha-D-phosphohexomutase superfamily PJW04_17805 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III PJW04_17810 IPR014710 RmlC-like jelly roll fold PJW04_17810 IPR011051 RmlC-like cupin domain superfamily PJW04_17810 IPR005835 Nucleotidyl transferase domain PJW04_17810 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal PJW04_17810 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase PJW04_17810 IPR029044 Nucleotide-diphospho-sugar transferases PJW04_17815 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal PJW04_17815 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type PJW04_17815 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation PJW04_17815 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal PJW04_17815 IPR017476 UDP-glucose/GDP-mannose dehydrogenase PJW04_17815 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily PJW04_17815 IPR036291 NAD(P)-binding domain superfamily PJW04_17815 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily PJW04_17820 IPR005913 dTDP-4-dehydrorhamnose reductase family PJW04_17820 IPR036291 NAD(P)-binding domain superfamily PJW04_17820 IPR029903 RmlD-like substrate binding domain PJW04_17825 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related PJW04_17825 IPR014710 RmlC-like jelly roll fold PJW04_17825 IPR011051 RmlC-like cupin domain superfamily PJW04_17830 IPR029044 Nucleotide-diphospho-sugar transferases PJW04_17830 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form PJW04_17830 IPR005835 Nucleotidyl transferase domain PJW04_17835 IPR005888 dTDP-glucose 4,6-dehydratase PJW04_17835 IPR016040 NAD(P)-binding domain PJW04_17835 IPR036291 NAD(P)-binding domain superfamily PJW04_17840 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site PJW04_17840 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal PJW04_17840 IPR012255 Electron transfer flavoprotein, beta subunit PJW04_17840 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal PJW04_17840 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PJW04_17845 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal PJW04_17845 IPR001308 Electron transfer flavoprotein alpha subunit/FixB PJW04_17845 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PJW04_17845 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site PJW04_17845 IPR029035 DHS-like NAD/FAD-binding domain superfamily PJW04_17845 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal PJW04_17845 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal PJW04_17855 IPR036412 HAD-like superfamily PJW04_17855 IPR023214 HAD superfamily PJW04_17855 IPR039653 Prenyltransferase PJW04_17855 IPR000537 UbiA prenyltransferase family PJW04_17860 IPR016166 FAD-binding domain, PCMH-type PJW04_17860 IPR036318 FAD-binding, type PCMH-like superfamily PJW04_17860 IPR016167 FAD-binding, type PCMH, subdomain 1 PJW04_17860 IPR016169 FAD-binding, type PCMH, subdomain 2 PJW04_17860 IPR006094 FAD linked oxidase, N-terminal PJW04_17860 IPR007173 D-arabinono-1,4-lactone oxidase PJW04_17865 IPR002347 Short-chain dehydrogenase/reductase SDR PJW04_17865 IPR036291 NAD(P)-binding domain superfamily PJW04_17865 IPR020904 Short-chain dehydrogenase/reductase, conserved site PJW04_17870 IPR036291 NAD(P)-binding domain superfamily PJW04_17870 IPR001509 NAD-dependent epimerase/dehydratase PJW04_17870 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase PJW04_17875 IPR036188 FAD/NAD(P)-binding domain superfamily PJW04_17875 IPR014105 Carotenoid/retinoid oxidoreductase PJW04_17875 IPR002937 Amine oxidase PJW04_17895 IPR007739 Rhamnan synthesis F PJW04_17895 IPR032719 Glycosyltransferase WbsX PJW04_17900 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_17900 IPR017871 ABC transporter, conserved site PJW04_17900 IPR003439 ABC transporter-like PJW04_17900 IPR003593 AAA+ ATPase domain PJW04_17910 IPR015424 Pyridoxal phosphate-dependent transferase PJW04_17910 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PJW04_17910 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PJW04_17910 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme PJW04_17915 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme PJW04_17915 IPR000644 CBS domain PJW04_17915 IPR005857 Cystathionine beta-synthase PJW04_17915 IPR001926 Pyridoxal-phosphate dependent enzyme PJW04_17935 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_17935 IPR006321 Pilus retraction protein PilT PJW04_17935 IPR001482 Type II/IV secretion system protein PJW04_17940 IPR034330 Glutathione S-transferases, class Zeta , C-terminal PJW04_17940 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PJW04_17940 IPR040079 Glutathione Transferase family PJW04_17940 IPR004045 Glutathione S-transferase, N-terminal PJW04_17940 IPR004046 Glutathione S-transferase, C-terminal PJW04_17940 IPR005955 Glutathione S-transferases, class Zeta PJW04_17940 IPR034333 Glutathione S-transferases, class Zeta , N-terminal PJW04_17940 IPR036249 Thioredoxin-like superfamily PJW04_17940 IPR010987 Glutathione S-transferase, C-terminal-like PJW04_17950 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site PJW04_17950 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_17950 IPR014014 RNA helicase, DEAD-box type, Q motif PJW04_17950 IPR014001 Helicase superfamily 1/2, ATP-binding domain PJW04_17950 IPR028622 ATP-dependent RNA helicase RhlE PJW04_17950 IPR011545 DEAD/DEAH box helicase domain PJW04_17950 IPR001650 Helicase, C-terminal PJW04_17955 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family PJW04_17955 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily PJW04_17965 IPR004472 Dethiobiotin synthase BioD PJW04_17965 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_17970 IPR003018 GAF domain PJW04_17970 IPR029016 GAF-like domain superfamily PJW04_17970 IPR000614 Free Met sulfoxide reductase conserved site PJW04_17980 IPR023214 HAD superfamily PJW04_17980 IPR036412 HAD-like superfamily PJW04_17980 IPR006439 HAD hydrolase, subfamily IA PJW04_17980 IPR037512 Phosphoglycolate phosphatase, prokaryotic PJW04_17980 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic PJW04_17980 IPR023198 Phosphoglycolate phosphatase-like, domain 2 PJW04_17980 IPR041492 Haloacid dehalogenase-like hydrolase PJW04_17985 IPR022880 DNA polymerase IV PJW04_17985 IPR001126 UmuC domain PJW04_17985 IPR036775 DNA polymerase, Y-family, little finger domain superfamily PJW04_17985 IPR017961 DNA polymerase, Y-family, little finger domain PJW04_17990 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA PJW04_17990 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ PJW04_17990 IPR029069 HotDog domain superfamily PJW04_17995 IPR016039 Thiolase-like PJW04_17995 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain PJW04_17995 IPR014030 Beta-ketoacyl synthase, N-terminal PJW04_17995 IPR000794 Beta-ketoacyl synthase PJW04_17995 IPR018201 Beta-ketoacyl synthase, active site PJW04_17995 IPR014031 Beta-ketoacyl synthase, C-terminal PJW04_18005 IPR001567 Peptidase M3A/M3B catalytic domain PJW04_18005 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 PJW04_18020 IPR001117 Multicopper oxidase, type 1 PJW04_18020 IPR011706 Multicopper oxidase, type 2 PJW04_18020 IPR011707 Multicopper oxidase, type 3 PJW04_18020 IPR006376 Copper-resistance protein CopA PJW04_18020 IPR033138 Multicopper oxidases, conserved site PJW04_18020 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal PJW04_18020 IPR006311 Twin-arginine translocation pathway, signal sequence PJW04_18020 IPR034279 Copper resistance protein, third cupredoxin domain PJW04_18020 IPR034282 Copper resistance protein CopA, second cupredoxin domain PJW04_18020 IPR034284 Copper resistance protein, first cupredoxin domain PJW04_18020 IPR008972 Cupredoxin PJW04_18020 IPR002355 Multicopper oxidase, copper-binding site PJW04_18025 IPR007939 Copper resistance B precursor PJW04_18030 IPR037523 Vicinal oxygen chelate (VOC) domain PJW04_18030 IPR018146 Glyoxalase I, conserved site PJW04_18030 IPR004361 Glyoxalase I PJW04_18030 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PJW04_18030 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PJW04_18055 IPR017932 Glutamine amidotransferase type 2 domain PJW04_18055 IPR035466 GlmS/AgaS, SIS domain 1 PJW04_18055 IPR035490 GlmS/FrlB, SIS domain 2 PJW04_18055 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising PJW04_18055 IPR001347 Sugar isomerase (SIS) PJW04_18055 IPR029055 Nucleophile aminohydrolases, N-terminal PJW04_18060 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PJW04_18060 IPR006143 RND efflux pump, membrane fusion protein PJW04_18060 IPR030190 Macrolide export protein MacA PJW04_18065 IPR003439 ABC transporter-like PJW04_18065 IPR017871 ABC transporter, conserved site PJW04_18065 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_18065 IPR003593 AAA+ ATPase domain PJW04_18070 IPR003838 ABC transporter permease protein domain PJW04_18070 IPR005085 Carbohydrate binding module family 25 PJW04_18070 IPR025857 MacB-like periplasmic core domain PJW04_18075 IPR003838 ABC transporter permease protein domain PJW04_18075 IPR005085 Carbohydrate binding module family 25 PJW04_18075 IPR025857 MacB-like periplasmic core domain PJW04_18085 IPR029995 Transcriptional activator SfnR/FlbD PJW04_18085 IPR025944 Sigma-54 interaction domain, conserved site PJW04_18085 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PJW04_18085 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PJW04_18085 IPR002078 RNA polymerase sigma factor 54 interaction domain PJW04_18085 IPR002197 DNA binding HTH domain, Fis-type PJW04_18085 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_18085 IPR011006 CheY-like superfamily PJW04_18085 IPR003593 AAA+ ATPase domain PJW04_18085 IPR001789 Signal transduction response regulator, receiver domain PJW04_18085 IPR009057 Homeobox-like domain superfamily PJW04_18090 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_18090 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PJW04_18090 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PJW04_18090 IPR005467 Histidine kinase domain PJW04_18090 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_18090 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW04_18090 IPR029151 Periplasmic sensor-like domain superfamily PJW04_18095 IPR029044 Nucleotide-diphospho-sugar transferases PJW04_18095 IPR025877 MobA-like NTP transferase PJW04_18095 IPR018357 Hexapeptide transferase, conserved site PJW04_18095 IPR001451 Hexapeptide repeat PJW04_18095 IPR038009 GlmU, C-terminal LbH domain PJW04_18095 IPR011004 Trimeric LpxA-like superfamily PJW04_18095 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase PJW04_18105 IPR036263 Chorismate mutase type II superfamily PJW04_18105 IPR008240 Chorismate mutase, periplasmic PJW04_18105 IPR002701 Chorismate mutase II, prokaryotic-type PJW04_18115 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily PJW04_18115 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit PJW04_18115 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain PJW04_18115 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal PJW04_18115 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal PJW04_18120 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain PJW04_18120 IPR003593 AAA+ ATPase domain PJW04_18120 IPR005722 ATP synthase, F1 complex, beta subunit PJW04_18120 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site PJW04_18120 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain PJW04_18120 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily PJW04_18120 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal PJW04_18120 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_18125 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily PJW04_18125 IPR000131 ATP synthase, F1 complex, gamma subunit PJW04_18125 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site PJW04_18130 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_18130 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily PJW04_18130 IPR000793 ATP synthase, alpha subunit, C-terminal PJW04_18130 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain PJW04_18130 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain PJW04_18130 IPR005294 ATP synthase, F1 complex, alpha subunit PJW04_18130 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site PJW04_18130 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain PJW04_18130 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily PJW04_18130 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily PJW04_18135 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily PJW04_18135 IPR000711 ATPase, OSCP/delta subunit PJW04_18140 IPR005864 ATP synthase, F0 complex, subunit b, bacterial PJW04_18140 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast PJW04_18140 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily PJW04_18145 IPR002379 V-ATPase proteolipid subunit C-like domain PJW04_18145 IPR035921 F/V-ATP synthase subunit C superfamily PJW04_18145 IPR038662 F1F0 ATP synthase subunit C superfamily PJW04_18145 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site PJW04_18145 IPR000454 ATP synthase, F0 complex, subunit C PJW04_18145 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast PJW04_18150 IPR035908 ATP synthase, F0 complex, subunit A superfamily PJW04_18150 IPR023011 ATP synthase, F0 complex, subunit A, active site PJW04_18150 IPR000568 ATP synthase, F0 complex, subunit A PJW04_18170 IPR036188 FAD/NAD(P)-binding domain superfamily PJW04_18170 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site PJW04_18170 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PJW04_18170 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily PJW04_18170 IPR006258 Dihydrolipoamide dehydrogenase PJW04_18170 IPR023753 FAD/NAD(P)-binding domain PJW04_18170 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I PJW04_18180 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site PJW04_18180 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex PJW04_18180 IPR000089 Biotin/lipoyl attachment PJW04_18180 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily PJW04_18180 IPR036625 E3-binding domain superfamily PJW04_18180 IPR004167 Peripheral subunit-binding domain PJW04_18180 IPR011053 Single hybrid motif PJW04_18180 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain PJW04_18210 IPR004872 Lipoprotein NlpA family PJW04_18215 IPR035906 MetI-like superfamily PJW04_18215 IPR000515 ABC transporter type 1, transmembrane domain MetI-like PJW04_18220 IPR026253 Methionine import ATP-binding protein MetN PJW04_18220 IPR003439 ABC transporter-like PJW04_18220 IPR003593 AAA+ ATPase domain PJW04_18220 IPR017871 ABC transporter, conserved site PJW04_18220 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal PJW04_18220 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain PJW04_18220 IPR018449 NIL domain PJW04_18220 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_18225 IPR000620 EamA domain PJW04_18230 IPR036183 YajQ-like superfamily PJW04_18230 IPR035570 UPF0234, N-terminal PJW04_18230 IPR007551 Protein of unknown function DUF520 PJW04_18230 IPR035571 UPF0234-like, C-terminal PJW04_18240 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB PJW04_18240 IPR001789 Signal transduction response regulator, receiver domain PJW04_18240 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain PJW04_18240 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW04_18240 IPR013767 PAS fold PJW04_18240 IPR035965 PAS domain superfamily PJW04_18240 IPR000700 PAS-associated, C-terminal PJW04_18240 IPR000014 PAS domain PJW04_18240 IPR036641 HPT domain superfamily PJW04_18240 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PJW04_18240 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PJW04_18240 IPR005467 Histidine kinase domain PJW04_18240 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_18240 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_18240 IPR011006 CheY-like superfamily PJW04_18240 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily PJW04_18240 IPR040642 Histidine kinase receptor ArcB, transmembrane domain PJW04_18255 IPR002347 Short-chain dehydrogenase/reductase SDR PJW04_18255 IPR020904 Short-chain dehydrogenase/reductase, conserved site PJW04_18255 IPR036291 NAD(P)-binding domain superfamily PJW04_18260 IPR036412 HAD-like superfamily PJW04_18260 IPR006439 HAD hydrolase, subfamily IA PJW04_18260 IPR041492 Haloacid dehalogenase-like hydrolase PJW04_18260 IPR023214 HAD superfamily PJW04_18260 IPR023198 Phosphoglycolate phosphatase-like, domain 2 PJW04_18265 IPR002942 RNA-binding S4 domain PJW04_18265 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site PJW04_18265 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F PJW04_18265 IPR036986 RNA-binding S4 domain superfamily PJW04_18265 IPR020103 Pseudouridine synthase, catalytic domain superfamily PJW04_18265 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain PJW04_18265 IPR006145 Pseudouridine synthase, RsuA/RluA PJW04_18270 IPR002052 DNA methylase, N-6 adenine-specific, conserved site PJW04_18270 IPR013675 Methyltransferase small, N-terminal PJW04_18270 IPR023543 rRNA small subunit methyltransferase C PJW04_18270 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW04_18270 IPR007848 Methyltransferase small domain PJW04_18280 IPR012938 Glucose/Sorbosone dehydrogenase PJW04_18280 IPR011042 Six-bladed beta-propeller, TolB-like PJW04_18280 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase PJW04_18290 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW04_18290 IPR013767 PAS fold PJW04_18290 IPR000014 PAS domain PJW04_18290 IPR035965 PAS domain superfamily PJW04_18290 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PJW04_18290 IPR005467 Histidine kinase domain PJW04_18290 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_18290 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PJW04_18290 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_18310 IPR000821 Alanine racemase PJW04_18310 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal PJW04_18310 IPR011079 Alanine racemase, C-terminal PJW04_18310 IPR001608 Alanine racemase, N-terminal PJW04_18310 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site PJW04_18310 IPR029066 PLP-binding barrel PJW04_18315 IPR006076 FAD dependent oxidoreductase PJW04_18315 IPR036188 FAD/NAD(P)-binding domain superfamily PJW04_18315 IPR023080 D-amino acid dehydrogenase DadA PJW04_18320 IPR011991 ArsR-like helix-turn-helix domain PJW04_18320 IPR036390 Winged helix DNA-binding domain superfamily PJW04_18320 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_18320 IPR019885 Transcription regulator HTH, AsnC-type, conserved site PJW04_18320 IPR019888 Transcription regulator AsnC-type PJW04_18320 IPR011008 Dimeric alpha-beta barrel PJW04_18320 IPR000485 AsnC-type HTH domain PJW04_18320 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PJW04_18330 IPR028427 Peptide methionine sulfoxide reductase PJW04_18330 IPR002579 Peptide methionine sulphoxide reductase MrsB PJW04_18330 IPR011057 Mss4-like superfamily PJW04_18340 IPR000540 Flagellar motor protein MotA, conserved site PJW04_18340 IPR022522 Flagellar motor stator, MotA PJW04_18340 IPR002898 MotA/TolQ/ExbB proton channel PJW04_18345 IPR006665 OmpA-like domain PJW04_18345 IPR036737 OmpA-like domain superfamily PJW04_18345 IPR025713 Motility protein B, N-terminal domain PJW04_18370 IPR013525 ABC-2 type transporter PJW04_18370 IPR000412 ABC-2 transporter PJW04_18375 IPR003593 AAA+ ATPase domain PJW04_18375 IPR017871 ABC transporter, conserved site PJW04_18375 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_18375 IPR003439 ABC transporter-like PJW04_18380 IPR006153 Cation/H+ exchanger PJW04_18380 IPR018422 Cation/H+ exchanger, CPA1 family PJW04_18380 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria PJW04_18380 IPR038770 Sodium/solute symporter superfamily PJW04_18385 IPR036378 FAS1 domain superfamily PJW04_18385 IPR000782 FAS1 domain PJW04_18390 IPR036895 Uracil-DNA glycosylase-like domain superfamily PJW04_18390 IPR005122 Uracil-DNA glycosylase-like PJW04_18390 IPR005273 Uracil-DNA glycosylase family 4 PJW04_18400 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B PJW04_18400 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type PJW04_18405 IPR036390 Winged helix DNA-binding domain superfamily PJW04_18405 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_18405 IPR005119 LysR, substrate-binding PJW04_18405 IPR000847 Transcription regulator HTH, LysR PJW04_18410 IPR008254 Flavodoxin/nitric oxide synthase PJW04_18410 IPR005025 NADPH-dependent FMN reductase-like PJW04_18410 IPR029039 Flavoprotein-like superfamily PJW04_18415 IPR036812 NADP-dependent oxidoreductase domain superfamily PJW04_18415 IPR023210 NADP-dependent oxidoreductase domain PJW04_18415 IPR020471 Aldo/keto reductase PJW04_18425 IPR008753 Peptidase M13, N-terminal domain PJW04_18425 IPR042089 Peptidase M13, domain 2 PJW04_18425 IPR018497 Peptidase M13, C-terminal domain PJW04_18425 IPR000718 Peptidase M13 PJW04_18425 IPR024079 Metallopeptidase, catalytic domain superfamily PJW04_18440 IPR002293 Amino acid/polyamine transporter I PJW04_18450 IPR011006 CheY-like superfamily PJW04_18450 IPR007492 LytTR DNA-binding domain PJW04_18450 IPR001789 Signal transduction response regulator, receiver domain PJW04_18455 IPR033479 Double Cache domain 1 PJW04_18455 IPR003660 HAMP domain PJW04_18455 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_18455 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_18455 IPR005467 Histidine kinase domain PJW04_18455 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW04_18455 IPR010559 Signal transduction histidine kinase, internal region PJW04_18470 IPR012347 Ferritin-like PJW04_18470 IPR009078 Ferritin-like superfamily PJW04_18470 IPR010287 Domain of unknown function DUF892 PJW04_18475 IPR012347 Ferritin-like PJW04_18475 IPR009078 Ferritin-like superfamily PJW04_18475 IPR007760 Manganese catalase PJW04_18475 IPR027407 Manganese catalase, C-terminal PJW04_18475 IPR039377 Manganese catalase, ferritin-like di-iron-binding domain PJW04_18490 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW04_18490 IPR035909 Methylesterase CheB, C-terminal PJW04_18490 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal PJW04_18490 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal PJW04_18490 IPR000014 PAS domain PJW04_18490 IPR035965 PAS domain superfamily PJW04_18490 IPR013656 PAS fold-4 PJW04_18490 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase PJW04_18490 IPR000780 MCP methyltransferase, CheR-type PJW04_18505 IPR011006 CheY-like superfamily PJW04_18505 IPR009057 Homeobox-like domain superfamily PJW04_18505 IPR003593 AAA+ ATPase domain PJW04_18505 IPR010114 DNA-binding transcriptional regulator NtrC PJW04_18505 IPR025944 Sigma-54 interaction domain, conserved site PJW04_18505 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PJW04_18505 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PJW04_18505 IPR002197 DNA binding HTH domain, Fis-type PJW04_18505 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_18505 IPR001789 Signal transduction response regulator, receiver domain PJW04_18505 IPR002078 RNA polymerase sigma factor 54 interaction domain PJW04_18515 IPR002585 Cytochrome ubiquinol oxidase subunit 1 PJW04_18520 IPR003317 Cytochrome ubiquinol oxidase subunit 2 PJW04_18535 IPR002347 Short-chain dehydrogenase/reductase SDR PJW04_18535 IPR020904 Short-chain dehydrogenase/reductase, conserved site PJW04_18535 IPR036291 NAD(P)-binding domain superfamily PJW04_18540 IPR005886 UDP-glucose 4-epimerase PJW04_18540 IPR036291 NAD(P)-binding domain superfamily PJW04_18540 IPR016040 NAD(P)-binding domain PJW04_18550 IPR004379 UDP-galactopyranose mutase PJW04_18550 IPR015899 UDP-galactopyranose mutase, C-terminal PJW04_18560 IPR036640 ABC transporter type 1, transmembrane domain superfamily PJW04_18560 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_18560 IPR039421 Type I protein exporter PJW04_18560 IPR003439 ABC transporter-like PJW04_18560 IPR003593 AAA+ ATPase domain PJW04_18560 IPR011527 ABC transporter type 1, transmembrane domain PJW04_18560 IPR017871 ABC transporter, conserved site PJW04_18575 IPR036291 NAD(P)-binding domain superfamily PJW04_18575 IPR011032 GroES-like superfamily PJW04_18575 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site PJW04_18575 IPR027399 Alcohol dehydrogenase GroES-associated PJW04_18575 IPR013154 Alcohol dehydrogenase, N-terminal PJW04_18575 IPR013149 Alcohol dehydrogenase, C-terminal PJW04_18620 IPR037066 TonB-dependent receptor, plug domain superfamily PJW04_18620 IPR000531 TonB-dependent receptor-like, beta-barrel PJW04_18620 IPR039423 TonB-dependent receptor-like PJW04_18620 IPR010105 TonB-dependent siderophore receptor PJW04_18620 IPR012910 TonB-dependent receptor, plug domain PJW04_18620 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PJW04_18640 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_18640 IPR017871 ABC transporter, conserved site PJW04_18640 IPR003439 ABC transporter-like PJW04_18640 IPR003593 AAA+ ATPase domain PJW04_18650 IPR000847 Transcription regulator HTH, LysR PJW04_18650 IPR005119 LysR, substrate-binding PJW04_18650 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_18650 IPR036390 Winged helix DNA-binding domain superfamily PJW04_18655 IPR035959 RutC-like superfamily PJW04_18655 IPR006175 YjgF/YER057c/UK114 family PJW04_18655 IPR038743 YjgH-like PJW04_18675 IPR036390 Winged helix DNA-binding domain superfamily PJW04_18675 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_18675 IPR000847 Transcription regulator HTH, LysR PJW04_18675 IPR005119 LysR, substrate-binding PJW04_18680 IPR029039 Flavoprotein-like superfamily PJW04_18680 IPR003680 Flavodoxin-like fold PJW04_18680 IPR023048 NADH-azoreductase, FMN-dependent PJW04_18710 IPR018045 Sulphate anion transporter, conserved site PJW04_18710 IPR001902 SLC26A/SulP transporter PJW04_18710 IPR011547 SLC26A/SulP transporter domain PJW04_18710 IPR036513 STAS domain superfamily PJW04_18710 IPR002645 STAS domain PJW04_18715 IPR001807 Chloride channel, voltage gated PJW04_18715 IPR014743 Chloride channel, core PJW04_18715 IPR023861 Chloride channel, ClcA PJW04_18725 IPR001714 Peptidase M24, methionine aminopeptidase PJW04_18725 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 PJW04_18725 IPR000994 Peptidase M24 PJW04_18725 IPR036005 Creatinase/aminopeptidase-like PJW04_18735 IPR005119 LysR, substrate-binding PJW04_18735 IPR000847 Transcription regulator HTH, LysR PJW04_18735 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_18735 IPR036390 Winged helix DNA-binding domain superfamily PJW04_18740 IPR036291 NAD(P)-binding domain superfamily PJW04_18740 IPR002347 Short-chain dehydrogenase/reductase SDR PJW04_18750 IPR036188 FAD/NAD(P)-binding domain superfamily PJW04_18750 IPR002938 FAD-binding domain PJW04_18755 IPR036188 FAD/NAD(P)-binding domain superfamily PJW04_18755 IPR002938 FAD-binding domain PJW04_18770 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW04_18770 IPR002052 DNA methylase, N-6 adenine-specific, conserved site PJW04_18770 IPR002941 DNA methylase N-4/N-6 PJW04_18770 IPR001091 Restriction/modification DNA-methylase PJW04_18780 IPR006430 Phage portal protein PBSX family PJW04_18780 IPR030935 Phage portal protein PBSX family, Proteobacteria PJW04_18845 IPR005083 Serine/Threonine acetyltransferase, YopJ PJW04_19020 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_19020 IPR028630 RNA polymerase sigma factor RpoD PJW04_19020 IPR012760 RNA polymerase sigma factor RpoD, C-terminal PJW04_19020 IPR013324 RNA polymerase sigma factor, region 3/4-like PJW04_19020 IPR042189 Sigma-70 factor, region 1.1 superfamily PJW04_19020 IPR007127 RNA polymerase sigma factor 70, region 1.1 PJW04_19020 IPR013325 RNA polymerase sigma factor, region 2 PJW04_19020 IPR007630 RNA polymerase sigma-70 region 4 PJW04_19020 IPR014284 RNA polymerase sigma-70 like domain PJW04_19020 IPR007624 RNA polymerase sigma-70 region 3 PJW04_19020 IPR007627 RNA polymerase sigma-70 region 2 PJW04_19020 IPR009042 RNA polymerase sigma-70 region 1.2 PJW04_19020 IPR000943 RNA polymerase sigma-70 PJW04_19020 IPR007631 RNA polymerase sigma factor 70, non-essential domain PJW04_19025 IPR003732 D-aminoacyl-tRNA deacylase DTD PJW04_19025 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily PJW04_19030 IPR030857 Lipid A biosynthesis palmitoleoyltransferase, LpxP PJW04_19030 IPR004960 Bacterial lipid A biosynthesis acyltransferase PJW04_19030 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase PJW04_19035 IPR016181 Acyl-CoA N-acyltransferase PJW04_19035 IPR000182 GNAT domain PJW04_19040 IPR032677 GTP cyclohydrolase II PJW04_19040 IPR000926 GTP cyclohydrolase II, RibA PJW04_19040 IPR036144 RibA-like superfamily PJW04_19060 IPR001173 Glycosyltransferase 2-like PJW04_19060 IPR029044 Nucleotide-diphospho-sugar transferases PJW04_19075 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW04_19075 IPR004573 rRNA small subunit methyltransferase B PJW04_19075 IPR023267 RNA (C5-cytosine) methyltransferase PJW04_19075 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type PJW04_19075 IPR035926 NusB-like superfamily PJW04_19075 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site PJW04_19075 IPR006027 NusB/RsmB/TIM44 PJW04_19080 IPR005794 Methionyl-tRNA formyltransferase PJW04_19080 IPR005793 Formyl transferase, C-terminal PJW04_19080 IPR037022 Formyl transferase, C-terminal domain superfamily PJW04_19080 IPR002376 Formyl transferase, N-terminal PJW04_19080 IPR036477 Formyl transferase, N-terminal domain superfamily PJW04_19080 IPR011034 Formyl transferase-like, C-terminal domain superfamily PJW04_19080 IPR001555 Phosphoribosylglycinamide formyltransferase, active site PJW04_19080 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain PJW04_19085 IPR023635 Peptide deformylase PJW04_19085 IPR036821 Peptide deformylase superfamily PJW04_19090 IPR018392 LysM domain PJW04_19090 IPR036779 LysM domain superfamily PJW04_19095 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_19095 IPR003488 DNA recombination-mediator protein A PJW04_19095 IPR041614 DprA, winged helix domain PJW04_19100 IPR007456 Smg PJW04_19105 IPR012902 Prokaryotic N-terminal methylation site PJW04_19105 IPR001082 Fimbrial protein pilin PJW04_19115 IPR025589 Topoisomerase C-terminal repeat PJW04_19115 IPR028612 DNA topoisomerase I, type IA PJW04_19115 IPR005733 DNA topoisomerase I, bacterial-type PJW04_19115 IPR003602 DNA topoisomerase, type IA, DNA-binding domain PJW04_19115 IPR023405 DNA topoisomerase, type IA, core domain PJW04_19115 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 PJW04_19115 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 PJW04_19115 IPR013497 DNA topoisomerase, type IA, central PJW04_19115 IPR023406 DNA topoisomerase, type IA, active site PJW04_19115 IPR003601 DNA topoisomerase, type IA, domain 2 PJW04_19115 IPR000380 DNA topoisomerase, type IA PJW04_19115 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 PJW04_19115 IPR034149 DNA topoisomerase 1, TOPRIM domain PJW04_19115 IPR006171 TOPRIM domain PJW04_19120 IPR006070 YrdC-like domain PJW04_19120 IPR023535 Threonylcarbamoyl-AMP synthase PJW04_19120 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily PJW04_19135 IPR002347 Short-chain dehydrogenase/reductase SDR PJW04_19135 IPR020904 Short-chain dehydrogenase/reductase, conserved site PJW04_19135 IPR036291 NAD(P)-binding domain superfamily PJW04_19145 IPR029045 ClpP/crotonase-like domain superfamily PJW04_19145 IPR004635 Peptidase S49, SppA PJW04_19145 IPR002142 Peptidase S49 PJW04_19145 IPR033854 Signal peptide peptidase A PJW04_19145 IPR004634 Peptidase S49, protease IV PJW04_19150 IPR002528 Multi antimicrobial extrusion protein PJW04_19170 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain PJW04_19170 IPR041236 Primosomal protein N, C-terminal domain PJW04_19170 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily PJW04_19170 IPR005259 Primosomal protein N' PJW04_19170 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_19170 IPR001650 Helicase, C-terminal PJW04_19170 IPR014001 Helicase superfamily 1/2, ATP-binding domain PJW04_19170 IPR011545 DEAD/DEAH box helicase domain PJW04_19170 IPR041222 Primosomal protein N', 3' DNA-binding domain PJW04_19175 IPR010987 Glutathione S-transferase, C-terminal-like PJW04_19175 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PJW04_19175 IPR004045 Glutathione S-transferase, N-terminal PJW04_19175 IPR004046 Glutathione S-transferase, C-terminal PJW04_19175 IPR036249 Thioredoxin-like superfamily PJW04_19190 IPR036188 FAD/NAD(P)-binding domain superfamily PJW04_19190 IPR023753 FAD/NAD(P)-binding domain PJW04_19195 IPR005115 Uncharacterised domain UPF0126 PJW04_19200 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria PJW04_19200 IPR014284 RNA polymerase sigma-70 like domain PJW04_19200 IPR007630 RNA polymerase sigma-70 region 4 PJW04_19200 IPR013325 RNA polymerase sigma factor, region 2 PJW04_19200 IPR013324 RNA polymerase sigma factor, region 3/4-like PJW04_19200 IPR000943 RNA polymerase sigma-70 PJW04_19200 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_19200 IPR007627 RNA polymerase sigma-70 region 2 PJW04_19205 IPR018085 Uracil-DNA glycosylase, active site PJW04_19205 IPR005122 Uracil-DNA glycosylase-like PJW04_19205 IPR002043 Uracil-DNA glycosylase family 1 PJW04_19205 IPR036895 Uracil-DNA glycosylase-like domain superfamily PJW04_19210 IPR001789 Signal transduction response regulator, receiver domain PJW04_19210 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type PJW04_19210 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase PJW04_19210 IPR011006 CheY-like superfamily PJW04_19210 IPR035909 Methylesterase CheB, C-terminal PJW04_19215 IPR040690 FtsX, extracellular domain PJW04_19215 IPR004513 Cell division protein FtsX PJW04_19220 IPR003593 AAA+ ATPase domain PJW04_19220 IPR003439 ABC transporter-like PJW04_19220 IPR017871 ABC transporter, conserved site PJW04_19220 IPR005286 Cell division protein FtsE, ATP-binding PJW04_19220 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_19225 IPR023554 ATP-dependent RNA helicase RhlB type PJW04_19225 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site PJW04_19225 IPR022077 ATP-dependent RNA helicase RhlB PJW04_19225 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_19225 IPR001650 Helicase, C-terminal PJW04_19225 IPR014001 Helicase superfamily 1/2, ATP-binding domain PJW04_19225 IPR011545 DEAD/DEAH box helicase domain PJW04_19225 IPR014014 RNA helicase, DEAD-box type, Q motif PJW04_19230 IPR017937 Thioredoxin, conserved site PJW04_19230 IPR005746 Thioredoxin PJW04_19230 IPR036249 Thioredoxin-like superfamily PJW04_19230 IPR013766 Thioredoxin domain PJW04_19235 IPR012340 Nucleic acid-binding, OB-fold PJW04_19235 IPR011129 Cold shock domain PJW04_19235 IPR003593 AAA+ ATPase domain PJW04_19235 IPR004665 Transcription termination factor Rho PJW04_19235 IPR041703 Transcription termination factor Rho, ATP binding domain PJW04_19235 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_19235 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain PJW04_19235 IPR011112 Rho termination factor, N-terminal PJW04_19235 IPR011113 Rho termination factor, RNA-binding domain PJW04_19245 IPR010452 Isocitrate dehydrogenase kinasephosphatase PJW04_19250 IPR005119 LysR, substrate-binding PJW04_19250 IPR036390 Winged helix DNA-binding domain superfamily PJW04_19250 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_19250 IPR000847 Transcription regulator HTH, LysR PJW04_19260 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric PJW04_19270 IPR018392 LysM domain PJW04_19270 IPR036779 LysM domain superfamily PJW04_19270 IPR014004 Transport-associated and nodulation domain, bacteria PJW04_19270 IPR007055 BON domain PJW04_19275 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF PJW04_19275 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal PJW04_19275 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 PJW04_19280 IPR017439 Amidohydrolase PJW04_19280 IPR002933 Peptidase M20 PJW04_19280 IPR011650 Peptidase M20, dimerisation domain PJW04_19280 IPR036264 Bacterial exopeptidase dimerisation domain PJW04_19285 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PJW04_19285 IPR022824 Multidrug resistance protein MdtA PJW04_19285 IPR006143 RND efflux pump, membrane fusion protein PJW04_19290 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PJW04_19290 IPR001036 Acriflavin resistance protein PJW04_19290 IPR022831 Multidrug resistance protein MdtB PJW04_19295 IPR001036 Acriflavin resistance protein PJW04_19295 IPR023931 Multidrug resistance protein MdtC PJW04_19295 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PJW04_19300 IPR009770 Domain of unknown function DUF1338 PJW04_19340 IPR000755 D-alanyl-D-alanine dipeptidase PJW04_19340 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily PJW04_19345 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily PJW04_19345 IPR002502 N-acetylmuramoyl-L-alanine amidase domain PJW04_19345 IPR036366 PGBD superfamily PJW04_19345 IPR036365 PGBD-like superfamily PJW04_19355 IPR029065 Enolase C-terminal domain-like PJW04_19355 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site PJW04_19355 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain PJW04_19355 IPR029017 Enolase-like, N-terminal PJW04_19355 IPR036849 Enolase-like, C-terminal domain superfamily PJW04_19355 IPR034603 Dipeptide epimerase PJW04_19355 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal PJW04_19365 IPR004754 Amino acid antiporter PJW04_19365 IPR002293 Amino acid/polyamine transporter I PJW04_19385 IPR012938 Glucose/Sorbosone dehydrogenase PJW04_19385 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase PJW04_19385 IPR011042 Six-bladed beta-propeller, TolB-like PJW04_19390 IPR026891 Fibronectin type III-like domain PJW04_19390 IPR019800 Glycoside hydrolase, family 3, active site PJW04_19390 IPR002772 Glycoside hydrolase family 3 C-terminal domain PJW04_19390 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily PJW04_19390 IPR001764 Glycoside hydrolase, family 3, N-terminal PJW04_19390 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily PJW04_19390 IPR017853 Glycoside hydrolase superfamily PJW04_19390 IPR013783 Immunoglobulin-like fold PJW04_19395 IPR006156 Dihydroneopterin aldolase PJW04_19395 IPR006157 Dihydroneopterin aldolase/epimerase domain PJW04_19400 IPR017861 Kae1/TsaD family PJW04_19400 IPR017860 Peptidase M22, conserved site PJW04_19400 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD PJW04_19400 IPR000905 Gcp-like domain PJW04_19405 IPR001911 Ribosomal protein S21 PJW04_19405 IPR018278 Ribosomal protein S21, conserved site PJW04_19405 IPR038380 Ribosomal protein S21 superfamily PJW04_19410 IPR042184 YqeY/Aim41, N-terminal domain PJW04_19410 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like PJW04_19410 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 PJW04_19410 IPR019004 Uncharacterised protein YqeY/Aim41 PJW04_19420 IPR023679 Uncharacterised protein family UPF0761, bacterial PJW04_19420 IPR017039 Virulence factor BrkB PJW04_19425 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal PJW04_19425 IPR002694 Zinc finger, CHC2-type PJW04_19425 IPR034151 Bacterial DnaG primase, TOPRIM domain PJW04_19425 IPR030846 DNA primase DnaG, bacteria PJW04_19425 IPR036977 DNA Primase, CHC2-type zinc finger PJW04_19425 IPR006171 TOPRIM domain PJW04_19425 IPR006295 DNA primase, DnaG PJW04_19425 IPR019475 DNA primase, DnaB-helicase binding domain PJW04_19425 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily PJW04_19425 IPR013173 DNA primase DnaG, DnaB-binding domain PJW04_19425 IPR013264 DNA primase, catalytic core, N-terminal PJW04_19430 IPR038770 Sodium/solute symporter superfamily PJW04_19430 IPR016833 Putative sodium bile acid cotransporter PJW04_19440 IPR030470 UbiA prenyltransferase conserved site PJW04_19440 IPR006369 Protohaem IX farnesyltransferase PJW04_19440 IPR000537 UbiA prenyltransferase family PJW04_19465 IPR024791 Cytochrome c oxidase subunit III PJW04_19465 IPR033945 Cytochrome c oxidase subunit III domain PJW04_19465 IPR000298 Cytochrome c oxidase subunit III-like PJW04_19465 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle PJW04_19465 IPR035973 Cytochrome c oxidase subunit III-like superfamily PJW04_19470 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily PJW04_19470 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 PJW04_19480 IPR023616 Cytochrome c oxidase-like, subunit I domain PJW04_19480 IPR036927 Cytochrome c oxidase-like, subunit I superfamily PJW04_19480 IPR000883 Cytochrome c oxidase subunit I PJW04_19480 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site PJW04_19480 IPR033944 Cytochrome c oxidase subunit I domain PJW04_19480 IPR014241 Cytochrome c oxidase, subunit I bacterial type PJW04_19485 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain PJW04_19485 IPR002429 Cytochrome c oxidase subunit II-like C-terminal PJW04_19485 IPR034210 Cytochrome c oxidase subunit 2, C-terminal PJW04_19485 IPR001505 Copper centre Cu(A) PJW04_19485 IPR008972 Cupredoxin PJW04_19485 IPR014222 Cytochrome c oxidase, subunit II PJW04_19485 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily PJW04_19485 IPR005728 Rickettsial palindromic element PJW04_19495 IPR024089 Proline dehydrogenase PutA, domain I/II PJW04_19495 IPR024090 Proline dehydrogenase PutA, domain I PJW04_19495 IPR041349 Proline utilization A proline dehydrogenase N-terminal domain PJW04_19495 IPR029041 FAD-linked oxidoreductase-like PJW04_19495 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 PJW04_19495 IPR025703 Bifunctional protein PutA PJW04_19495 IPR029510 Aldehyde dehydrogenase, glutamic acid active site PJW04_19495 IPR015590 Aldehyde dehydrogenase domain PJW04_19495 IPR016162 Aldehyde dehydrogenase, N-terminal PJW04_19495 IPR010985 Ribbon-helix-helix PJW04_19495 IPR016160 Aldehyde dehydrogenase, cysteine active site PJW04_19495 IPR016163 Aldehyde dehydrogenase, C-terminal PJW04_19495 IPR016161 Aldehyde/histidinol dehydrogenase PJW04_19495 IPR013321 Arc-type ribbon-helix-helix PJW04_19495 IPR002872 Proline dehydrogenase domain PJW04_19495 IPR024082 Proline dehydrogenase PutA, domain II PJW04_19525 IPR002942 RNA-binding S4 domain PJW04_19525 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 PJW04_19525 IPR024088 Tyrosine-tRNA ligase, bacterial-type PJW04_19525 IPR002307 Tyrosine-tRNA ligase PJW04_19525 IPR036986 RNA-binding S4 domain superfamily PJW04_19525 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PJW04_19525 IPR002305 Aminoacyl-tRNA synthetase, class Ic PJW04_19525 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site PJW04_19530 IPR007340 Opacity-associated protein A PJW04_19530 IPR016047 Peptidase M23 PJW04_19530 IPR011055 Duplicated hybrid motif PJW04_19535 IPR005338 Anhydro-N-acetylmuramic acid kinase PJW04_19545 IPR020846 Major facilitator superfamily domain PJW04_19545 IPR011701 Major facilitator superfamily PJW04_19545 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 PJW04_19545 IPR036259 MFS transporter superfamily PJW04_19550 IPR004808 AP endonuclease 1 PJW04_19550 IPR020847 AP endonuclease 1, binding site PJW04_19550 IPR005135 Endonuclease/exonuclease/phosphatase PJW04_19550 IPR036691 Endonuclease/exonuclease/phosphatase superfamily PJW04_19550 IPR020848 AP endonuclease 1, conserved site PJW04_19555 IPR029057 Phosphoribosyltransferase-like PJW04_19555 IPR000836 Phosphoribosyltransferase domain PJW04_19555 IPR004467 Orotate phosphoribosyl transferase domain PJW04_19555 IPR023031 Orotate phosphoribosyltransferase PJW04_19565 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_19565 IPR025669 AAA domain PJW04_19570 IPR003115 ParB/Sulfiredoxin PJW04_19570 IPR004437 ParB/RepB/Spo0J partition protein PJW04_19570 IPR041468 ParB/Spo0J, HTH domain PJW04_19570 IPR036086 ParB/Sulfiredoxin superfamily PJW04_19580 IPR001509 NAD-dependent epimerase/dehydratase PJW04_19580 IPR036291 NAD(P)-binding domain superfamily PJW04_19585 IPR001173 Glycosyltransferase 2-like PJW04_19585 IPR029044 Nucleotide-diphospho-sugar transferases PJW04_19600 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I PJW04_19600 IPR005841 Alpha-D-phosphohexomutase superfamily PJW04_19600 IPR016066 Alpha-D-phosphohexomutase, conserved site PJW04_19600 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily PJW04_19600 IPR005843 Alpha-D-phosphohexomutase, C-terminal PJW04_19600 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III PJW04_19600 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II PJW04_19600 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III PJW04_19605 IPR033704 dUTPase, trimeric PJW04_19605 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase PJW04_19605 IPR036157 dUTPase-like superfamily PJW04_19605 IPR029054 dUTPase-like PJW04_19610 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC PJW04_19610 IPR035929 CoaB-like superfamily PJW04_19610 IPR036551 Flavin prenyltransferase-like PJW04_19610 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal PJW04_19610 IPR003382 Flavoprotein PJW04_19615 IPR037518 MPN domain PJW04_19615 IPR025657 RadC-like JAB domain PJW04_19615 IPR010994 RuvA domain 2-like PJW04_19615 IPR020891 Uncharacterised protein family UPF0758, conserved site PJW04_19615 IPR001405 Uncharacterised protein family UPF0758 PJW04_19620 IPR005148 Arginyl tRNA synthetase N-terminal domain PJW04_19620 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding PJW04_19620 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PJW04_19620 IPR008909 DALR anticodon binding PJW04_19620 IPR035684 Arginyl-tRNA synthetase, catalytic core domain PJW04_19620 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily PJW04_19620 IPR001278 Arginine-tRNA ligase PJW04_19620 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site PJW04_19635 IPR020904 Short-chain dehydrogenase/reductase, conserved site PJW04_19635 IPR036291 NAD(P)-binding domain superfamily PJW04_19635 IPR002347 Short-chain dehydrogenase/reductase SDR PJW04_19640 IPR002656 Acyltransferase 3 PJW04_19640 IPR036514 SGNH hydrolase superfamily PJW04_19645 IPR004276 Glycosyltransferase family 28, N-terminal domain PJW04_19650 IPR001031 Thioesterase PJW04_19650 IPR009081 Phosphopantetheine binding ACP domain PJW04_19650 IPR020802 Polyketide synthase, thioesterase domain PJW04_19650 IPR020806 Polyketide synthase, phosphopantetheine-binding domain PJW04_19650 IPR001242 Condensation domain PJW04_19650 IPR020802 Polyketide synthase, thioesterase domain PJW04_19650 IPR042099 AMP-dependent synthetase-like superfamily PJW04_19650 IPR010071 Amino acid adenylation domain PJW04_19650 IPR029058 Alpha/Beta hydrolase fold PJW04_19650 IPR025110 AMP-binding enzyme, C-terminal domain PJW04_19650 IPR020845 AMP-binding, conserved site PJW04_19650 IPR000873 AMP-dependent synthetase/ligase PJW04_19650 IPR042099 AMP-dependent synthetase-like superfamily PJW04_19650 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily PJW04_19650 IPR001242 Condensation domain PJW04_19650 IPR020806 Polyketide synthase, phosphopantetheine-binding domain PJW04_19650 IPR009081 Phosphopantetheine binding ACP domain PJW04_19650 IPR001031 Thioesterase PJW04_19650 IPR010071 Amino acid adenylation domain PJW04_19650 IPR029058 Alpha/Beta hydrolase fold PJW04_19650 IPR036736 ACP-like superfamily PJW04_19650 IPR025110 AMP-binding enzyme, C-terminal domain PJW04_19650 IPR020845 AMP-binding, conserved site PJW04_19650 IPR000873 AMP-dependent synthetase/ligase PJW04_19650 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily PJW04_19650 IPR036736 ACP-like superfamily PJW04_19660 IPR040634 Arginine decarboxylase, helical bundle domain PJW04_19660 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal PJW04_19660 IPR041128 Arginine decarboxylase, C-terminal helical PJW04_19660 IPR002985 Arginine decarboxylase PJW04_19660 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site PJW04_19660 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal PJW04_19660 IPR000183 Ornithine/DAP/Arg decarboxylase PJW04_19660 IPR029066 PLP-binding barrel PJW04_19665 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW04_19665 IPR030374 Polyamine biosynthesis domain PJW04_19665 IPR030373 Polyamine biosynthesis domain, conserved site PJW04_19665 IPR001045 Spermidine/spermine synthases PJW04_19665 IPR035246 Spermidine synthase, tetramerisation domain PJW04_19665 IPR037163 Spermidine synthase, tetramerisation domain superfamily PJW04_19685 IPR011496 Beta-N-acetylglucosaminidase PJW04_19685 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily PJW04_19685 IPR002102 Cellulosome anchoring protein, cohesin domain PJW04_19685 IPR000421 Coagulation factor 5/8 C-terminal domain PJW04_19685 IPR017853 Glycoside hydrolase superfamily PJW04_19685 IPR013783 Immunoglobulin-like fold PJW04_19685 IPR003961 Fibronectin type III PJW04_19685 IPR036116 Fibronectin type III superfamily PJW04_19685 IPR008979 Galactose-binding-like domain superfamily PJW04_19685 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal PJW04_19685 IPR029018 Beta-hexosaminidase-like, domain 2 PJW04_19690 IPR002332 Nitrogen regulatory protein P-II, urydylation site PJW04_19690 IPR017918 Nitrogen regulatory protein PII, conserved site PJW04_19690 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal PJW04_19690 IPR011322 Nitrogen regulatory PII-like, alpha/beta PJW04_19690 IPR002187 Nitrogen regulatory protein PII PJW04_19695 IPR007475 Ubiquinone biosynthesis accessory factor UbiK PJW04_19700 IPR001208 MCM domain PJW04_19700 IPR025158 Mg chelatase-related protein, C-terminal domain PJW04_19700 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PJW04_19700 IPR020568 Ribosomal protein S5 domain 2-type fold PJW04_19700 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_19700 IPR000523 Magnesium chelatase ChlI domain PJW04_19700 IPR003593 AAA+ ATPase domain PJW04_19700 IPR004482 Mg chelatase-related protein PJW04_19715 IPR035919 EAL domain superfamily PJW04_19715 IPR001633 EAL domain PJW04_19715 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain PJW04_19720 IPR005804 Fatty acid desaturase domain PJW04_19725 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PJW04_19725 IPR036010 2Fe-2S ferredoxin-like superfamily PJW04_19725 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain PJW04_19725 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site PJW04_19725 IPR012675 Beta-grasp domain superfamily PJW04_19725 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain PJW04_19725 IPR017927 FAD-binding domain, ferredoxin reductase-type PJW04_19725 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase PJW04_19725 IPR017938 Riboflavin synthase-like beta-barrel PJW04_19725 IPR001433 Oxidoreductase FAD/NAD(P)-binding PJW04_19730 IPR023764 Transcriptional repressor HTH, FabR PJW04_19730 IPR001647 DNA-binding HTH domain, TetR-type PJW04_19730 IPR009057 Homeobox-like domain superfamily PJW04_19740 IPR036025 tRNA-splicing ligase RtcB-like superfamily PJW04_19740 IPR001233 tRNA-splicing ligase, RtcB PJW04_19780 IPR036291 NAD(P)-binding domain superfamily PJW04_19780 IPR013549 Domain of unknown function DUF1731 PJW04_19780 IPR010099 Epimerase family protein SDR39U1 PJW04_19780 IPR001509 NAD-dependent epimerase/dehydratase PJW04_19785 IPR039420 Transcriptional regulatory protein WalR-like PJW04_19785 IPR001789 Signal transduction response regulator, receiver domain PJW04_19785 IPR016032 Signal transduction response regulator, C-terminal effector PJW04_19785 IPR001867 OmpR/PhoB-type DNA-binding domain PJW04_19785 IPR011006 CheY-like superfamily PJW04_19785 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_19790 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PJW04_19790 IPR013727 Two-component sensor kinase, N-terminal PJW04_19790 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PJW04_19790 IPR005467 Histidine kinase domain PJW04_19790 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_19790 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_19790 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW04_19810 IPR001478 PDZ domain PJW04_19810 IPR036034 PDZ superfamily PJW04_19810 IPR011782 Peptidase S1C, Do PJW04_19810 IPR009003 Peptidase S1, PA clan PJW04_19810 IPR001940 Peptidase S1C PJW04_19830 IPR002549 Transmembrane protein TqsA-like PJW04_19835 IPR023214 HAD superfamily PJW04_19835 IPR041492 Haloacid dehalogenase-like hydrolase PJW04_19835 IPR023198 Phosphoglycolate phosphatase-like, domain 2 PJW04_19835 IPR036412 HAD-like superfamily PJW04_19835 IPR010972 Beta-phosphoglucomutase PJW04_19835 IPR010976 Beta-phosphoglucomutase hydrolase PJW04_19835 IPR006439 HAD hydrolase, subfamily IA PJW04_19840 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B PJW04_19840 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal PJW04_19840 IPR023042 Peptidase M17, leucine aminopeptidase PJW04_19840 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal PJW04_19850 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_19850 IPR013324 RNA polymerase sigma factor, region 3/4-like PJW04_19850 IPR013325 RNA polymerase sigma factor, region 2 PJW04_19850 IPR014284 RNA polymerase sigma-70 like domain PJW04_19850 IPR007627 RNA polymerase sigma-70 region 2 PJW04_19850 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site PJW04_19850 IPR039425 RNA polymerase sigma-70 like PJW04_19850 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 PJW04_19855 IPR024168 Catalase, SrpA-type, predicted PJW04_19855 IPR020835 Catalase superfamily PJW04_19855 IPR011614 Catalase core domain PJW04_19855 IPR018028 Catalase, mono-functional, haem-containing PJW04_19870 IPR011006 CheY-like superfamily PJW04_19870 IPR016032 Signal transduction response regulator, C-terminal effector PJW04_19870 IPR001789 Signal transduction response regulator, receiver domain PJW04_19870 IPR000792 Transcription regulator LuxR, C-terminal PJW04_19870 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_19875 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_19875 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain PJW04_19880 IPR022824 Multidrug resistance protein MdtA PJW04_19880 IPR039562 Membrane fusion protein, biotin-lipoyl like domain PJW04_19880 IPR006143 RND efflux pump, membrane fusion protein PJW04_19885 IPR003593 AAA+ ATPase domain PJW04_19885 IPR003439 ABC transporter-like PJW04_19885 IPR017871 ABC transporter, conserved site PJW04_19885 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_19905 IPR004626 RarD protein PJW04_19905 IPR000620 EamA domain PJW04_19910 IPR004779 Carboxylate/Amino Acid/Amine Transporter PJW04_19910 IPR000620 EamA domain PJW04_19925 IPR001279 Metallo-beta-lactamase PJW04_19925 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PJW04_19930 IPR002305 Aminoacyl-tRNA synthetase, class Ic PJW04_19930 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PJW04_19930 IPR002306 Tryptophan-tRNA ligase PJW04_19930 IPR024109 Tryptophan-tRNA ligase, bacterial-type PJW04_19930 IPR036913 YegP-like superfamily PJW04_19935 IPR008462 CsbD-like domain PJW04_19935 IPR026042 Stress response protein YjbJ PJW04_19935 IPR036629 YjbJ superfamily PJW04_19950 IPR014033 Arginase PJW04_19950 IPR006035 Ureohydrolase PJW04_19950 IPR023696 Ureohydrolase domain superfamily PJW04_19950 IPR020855 Ureohydrolase, manganese-binding site PJW04_19975 IPR039430 Thymidylate kinase-like domain PJW04_19975 IPR018094 Thymidylate kinase PJW04_19975 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_19990 IPR004619 Type III pantothenate kinase PJW04_19995 IPR036390 Winged helix DNA-binding domain superfamily PJW04_19995 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_19995 IPR008988 Transcriptional repressor, C-terminal PJW04_19995 IPR013196 Helix-turn-helix, type 11 PJW04_19995 IPR003142 Biotin protein ligase, C-terminal PJW04_19995 IPR004409 Biotin operon repressor, helix-turn-helix domain PJW04_19995 IPR004408 Biotin--acetyl-CoA-carboxylase ligase PJW04_19995 IPR030855 Bifunctional ligase/repressor BirA PJW04_19995 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain PJW04_20005 IPR024079 Metallopeptidase, catalytic domain superfamily PJW04_20005 IPR010384 MtfA family PJW04_20005 IPR042252 MtfA, N-terminal PJW04_20020 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW04_20020 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PJW04_20020 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_20020 IPR005467 Histidine kinase domain PJW04_20020 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_20020 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PJW04_20020 IPR003660 HAMP domain PJW04_20025 IPR011006 CheY-like superfamily PJW04_20025 IPR001867 OmpR/PhoB-type DNA-binding domain PJW04_20025 IPR001789 Signal transduction response regulator, receiver domain PJW04_20025 IPR039420 Transcriptional regulatory protein WalR-like PJW04_20025 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_20035 IPR018517 tRNA-dihydrouridine synthase, conserved site PJW04_20035 IPR035587 DUS-like, FMN-binding domain PJW04_20035 IPR004653 tRNA-dihydrouridine(20/20a) synthase PJW04_20035 IPR013785 Aldolase-type TIM barrel PJW04_20035 IPR001269 tRNA-dihydrouridine synthase PJW04_20050 IPR010582 Catalase immune-responsive domain PJW04_20050 IPR020835 Catalase superfamily PJW04_20050 IPR002226 Catalase haem-binding site PJW04_20050 IPR018028 Catalase, mono-functional, haem-containing PJW04_20050 IPR011614 Catalase core domain PJW04_20050 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 PJW04_20050 IPR037060 Catalase core domain superfamily PJW04_20050 IPR024708 Catalase active site PJW04_20055 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_20055 IPR001650 Helicase, C-terminal PJW04_20055 IPR039000 ATP-dependent DNA helicase DinG PJW04_20055 IPR010614 DEAD2 PJW04_20055 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type PJW04_20055 IPR006555 ATP-dependent helicase, C-terminal PJW04_20070 IPR022893 Shikimate dehydrogenase family PJW04_20070 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase PJW04_20070 IPR011342 Shikimate dehydrogenase PJW04_20070 IPR041121 SDH, C-terminal PJW04_20070 IPR036291 NAD(P)-binding domain superfamily PJW04_20070 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal PJW04_20080 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain PJW04_20080 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding PJW04_20080 IPR017927 FAD-binding domain, ferredoxin reductase-type PJW04_20080 IPR001094 Flavodoxin-like PJW04_20080 IPR008254 Flavodoxin/nitric oxide synthase PJW04_20080 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase PJW04_20080 IPR029039 Flavoprotein-like superfamily PJW04_20080 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PJW04_20080 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily PJW04_20080 IPR017938 Riboflavin synthase-like beta-barrel PJW04_20080 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria PJW04_20080 IPR001433 Oxidoreductase FAD/NAD(P)-binding PJW04_20090 IPR013785 Aldolase-type TIM barrel PJW04_20090 IPR001731 Delta-aminolevulinic acid dehydratase PJW04_20090 IPR030656 Delta-aminolevulinic acid dehydratase, active site PJW04_20115 IPR038554 Dipeptidylpeptidase IV, N-terminal domain superfamily PJW04_20115 IPR002469 Dipeptidylpeptidase IV, N-terminal domain PJW04_20115 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain PJW04_20115 IPR029058 Alpha/Beta hydrolase fold PJW04_20120 IPR004045 Glutathione S-transferase, N-terminal PJW04_20120 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PJW04_20120 IPR010987 Glutathione S-transferase, C-terminal-like PJW04_20120 IPR036249 Thioredoxin-like superfamily PJW04_20120 IPR004046 Glutathione S-transferase, C-terminal PJW04_20140 IPR036188 FAD/NAD(P)-binding domain superfamily PJW04_20140 IPR006905 Flavin-dependent halogenase PJW04_20140 IPR033856 Flavin-dependent tryptophan halogenase PJW04_20155 IPR017871 ABC transporter, conserved site PJW04_20155 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_20155 IPR003439 ABC transporter-like PJW04_20155 IPR003593 AAA+ ATPase domain PJW04_20165 IPR001387 Cro/C1-type helix-turn-helix domain PJW04_20165 IPR010982 Lambda repressor-like, DNA-binding domain superfamily PJW04_20175 IPR017853 Glycoside hydrolase superfamily PJW04_20175 IPR000514 Glycoside hydrolase, family 39 PJW04_20180 IPR038390 Metal-sensitive transcriptional repressor superfamily PJW04_20180 IPR003735 Metal-sensitive transcriptional repressor PJW04_20185 IPR002524 Cation efflux protein PJW04_20185 IPR036837 Cation efflux protein, cytoplasmic domain superfamily PJW04_20185 IPR027469 Cation efflux transmembrane domain superfamily PJW04_20190 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase PJW04_20190 IPR017927 FAD-binding domain, ferredoxin reductase-type PJW04_20190 IPR035442 Ferredoxin--NADP reductase, plant and Cyanobacteria type PJW04_20190 IPR008213 CpcD-like domain PJW04_20190 IPR001433 Oxidoreductase FAD/NAD(P)-binding PJW04_20190 IPR017938 Riboflavin synthase-like beta-barrel PJW04_20190 IPR015701 Ferredoxin--NADP reductase PJW04_20190 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PJW04_20195 IPR017871 ABC transporter, conserved site PJW04_20195 IPR003593 AAA+ ATPase domain PJW04_20195 IPR003439 ABC transporter-like PJW04_20195 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_20200 IPR000412 ABC-2 transporter PJW04_20200 IPR013525 ABC-2 type transporter PJW04_20205 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily PJW04_20205 IPR013328 6-phosphogluconate dehydrogenase, domain 2 PJW04_20205 IPR003710 Ketopantoate reductase ApbA/PanE PJW04_20205 IPR013332 Ketopantoate reductase, N-terminal domain PJW04_20205 IPR013752 Ketopantoate reductase, C-terminal domain PJW04_20205 IPR036291 NAD(P)-binding domain superfamily PJW04_20230 IPR010087 Flavodoxin, short chain PJW04_20230 IPR001094 Flavodoxin-like PJW04_20230 IPR008254 Flavodoxin/nitric oxide synthase PJW04_20230 IPR029039 Flavoprotein-like superfamily PJW04_20235 IPR009078 Ferritin-like superfamily PJW04_20235 IPR012348 Ribonucleotide reductase-like PJW04_20235 IPR033909 Ribonucleotide reductase small subunit PJW04_20235 IPR000358 Ribonucleotide reductase small subunit family PJW04_20240 IPR039718 Ribonucleoside-diphosphate reductase large subunit PJW04_20240 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal PJW04_20240 IPR013346 Ribonucleotide reductase, class I , alpha subunit PJW04_20240 IPR000788 Ribonucleotide reductase large subunit, C-terminal PJW04_20240 IPR013509 Ribonucleotide reductase large subunit, N-terminal PJW04_20240 IPR005144 ATP-cone domain PJW04_20250 IPR000182 GNAT domain PJW04_20250 IPR016102 Succinyl-CoA synthetase-like PJW04_20250 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain PJW04_20250 IPR036291 NAD(P)-binding domain superfamily PJW04_20250 IPR003781 CoA-binding PJW04_20250 IPR011761 ATP-grasp fold PJW04_20250 IPR016181 Acyl-CoA N-acyltransferase PJW04_20250 IPR013815 ATP-grasp fold, subdomain 1 PJW04_20255 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily PJW04_20255 IPR000644 CBS domain PJW04_20255 IPR006668 Magnesium transporter, MgtE intracellular domain PJW04_20255 IPR038076 MgtE, N-terminal domain superfamily PJW04_20255 IPR038048 Magnesium transporter MgtE, transmembrane domain PJW04_20255 IPR006669 Magnesium transporter MgtE PJW04_20255 IPR006667 SLC41 divalent cation transporters, integral membrane domain PJW04_20260 IPR041891 Carbonic anhydrase, prokaryotic-like PJW04_20260 IPR001148 Alpha carbonic anhydrase domain PJW04_20260 IPR036398 Alpha carbonic anhydrase domain superfamily PJW04_20260 IPR023561 Carbonic anhydrase, alpha-class PJW04_20260 IPR018338 Carbonic anhydrase, alpha-class, conserved site PJW04_20265 IPR020884 Glutathione-regulated potassium-efflux system protein KefB PJW04_20265 IPR003148 Regulator of K+ conductance, N-terminal PJW04_20265 IPR006153 Cation/H+ exchanger PJW04_20265 IPR004771 K+/H+ exchanger PJW04_20265 IPR038770 Sodium/solute symporter superfamily PJW04_20265 IPR036291 NAD(P)-binding domain superfamily PJW04_20270 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal PJW04_20270 IPR001282 Glucose-6-phosphate dehydrogenase PJW04_20270 IPR019796 Glucose-6-phosphate dehydrogenase, active site PJW04_20270 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding PJW04_20270 IPR036291 NAD(P)-binding domain superfamily PJW04_20275 IPR011613 GH15-like domain PJW04_20275 IPR012341 Six-hairpin glycosidase-like superfamily PJW04_20275 IPR008928 Six-hairpin glycosidase superfamily PJW04_20290 IPR038068 YcgL-like superfamily PJW04_20290 IPR027354 YcgL domain PJW04_20295 IPR016039 Thiolase-like PJW04_20295 IPR014030 Beta-ketoacyl synthase, N-terminal PJW04_20295 IPR014031 Beta-ketoacyl synthase, C-terminal PJW04_20295 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain PJW04_20295 IPR000794 Beta-ketoacyl synthase PJW04_20295 IPR018201 Beta-ketoacyl synthase, active site PJW04_20295 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 PJW04_20305 IPR039528 DPM1-like PJW04_20305 IPR001173 Glycosyltransferase 2-like PJW04_20305 IPR029044 Nucleotide-diphospho-sugar transferases PJW04_20325 IPR020904 Short-chain dehydrogenase/reductase, conserved site PJW04_20325 IPR002347 Short-chain dehydrogenase/reductase SDR PJW04_20325 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase PJW04_20325 IPR036291 NAD(P)-binding domain superfamily PJW04_20370 IPR002123 Phospholipid/glycerol acyltransferase PJW04_20370 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase PJW04_20380 IPR006162 Phosphopantetheine attachment site PJW04_20380 IPR009081 Phosphopantetheine binding ACP domain PJW04_20380 IPR003231 Acyl carrier protein (ACP) PJW04_20380 IPR036736 ACP-like superfamily PJW04_20385 IPR036188 FAD/NAD(P)-binding domain superfamily PJW04_20385 IPR006905 Flavin-dependent halogenase PJW04_20390 IPR031038 Chorismatase, FkbO/Hyg5 family PJW04_20390 IPR035959 RutC-like superfamily PJW04_20415 IPR001260 Coproporphyrinogen III oxidase, aerobic PJW04_20415 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily PJW04_20415 IPR018375 Coproporphyrinogen III oxidase, conserved site PJW04_20425 IPR036397 Ribonuclease H superfamily PJW04_20425 IPR012337 Ribonuclease H-like superfamily PJW04_20425 IPR029060 PIN-like domain superfamily PJW04_20425 IPR008918 Helix-hairpin-helix motif, class 2 PJW04_20425 IPR018320 DNA polymerase 1 PJW04_20425 IPR020045 DNA polymerase I-like, H3TH domain PJW04_20425 IPR001098 DNA-directed DNA polymerase, family A, palm domain PJW04_20425 IPR019760 DNA-directed DNA polymerase, family A, conserved site PJW04_20425 IPR036279 5'-3' exonuclease, C-terminal domain superfamily PJW04_20425 IPR002421 5'-3' exonuclease, N-terminal PJW04_20425 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal PJW04_20425 IPR002298 DNA polymerase A PJW04_20425 IPR002562 3'-5' exonuclease domain PJW04_20435 IPR010657 ImpA, N-terminal PJW04_20435 IPR017740 Type VI secretion system-associated, ImpA PJW04_20455 IPR008271 Serine/threonine-protein kinase, active site PJW04_20455 IPR000719 Protein kinase domain PJW04_20455 IPR011009 Protein kinase-like domain superfamily PJW04_20460 IPR015655 Protein phosphatase 2C family PJW04_20460 IPR001932 PPM-type phosphatase domain PJW04_20460 IPR036457 PPM-type phosphatase domain superfamily PJW04_20470 IPR010623 Type VI secretion system IcmF, C-terminal PJW04_20470 IPR017731 Type VI secretion system, IcmF PJW04_20470 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_20470 IPR025743 IcmF-related, N-terminal domain PJW04_20470 IPR009612 IcmF-related PJW04_20480 IPR010263 Type VI secretion protein, VC_A0114 PJW04_20485 IPR023210 NADP-dependent oxidoreductase domain PJW04_20485 IPR036812 NADP-dependent oxidoreductase domain superfamily PJW04_20490 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_20490 IPR000847 Transcription regulator HTH, LysR PJW04_20490 IPR005119 LysR, substrate-binding PJW04_20490 IPR036390 Winged helix DNA-binding domain superfamily PJW04_20505 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset PJW04_20505 IPR037026 Vgr protein, OB-fold domain superfamily PJW04_20505 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein PJW04_20505 IPR006531 Gp5 N-terminal PJW04_20535 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_20535 IPR013325 RNA polymerase sigma factor, region 2 PJW04_20535 IPR039425 RNA polymerase sigma-70 like PJW04_20535 IPR014284 RNA polymerase sigma-70 like domain PJW04_20535 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 PJW04_20535 IPR013324 RNA polymerase sigma factor, region 3/4-like PJW04_20535 IPR007627 RNA polymerase sigma-70 region 2 PJW04_20550 IPR000560 Histidine phosphatase superfamily, clade-2 PJW04_20550 IPR029033 Histidine phosphatase superfamily PJW04_20550 IPR033379 Histidine acid phosphatase active site PJW04_20590 IPR041546 ClpA/ClpB, AAA lid domain PJW04_20590 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_20590 IPR003593 AAA+ ATPase domain PJW04_20590 IPR019489 Clp ATPase, C-terminal PJW04_20590 IPR017729 Type VI secretion system, ATPase ClpV1 PJW04_20590 IPR036628 Clp, N-terminal domain superfamily PJW04_20590 IPR004176 Clp, N-terminal PJW04_20590 IPR003959 ATPase, AAA-type, core PJW04_20590 IPR001270 ClpA/B family PJW04_20590 IPR018368 ClpA/B, conserved site 1 PJW04_20600 IPR010272 Type VI secretion system, TssF-like PJW04_20605 IPR007048 IraD/Gp25-like PJW04_20605 IPR017737 Type VI secretion system-related protein PJW04_20610 IPR009211 Predicted virulence protein, SciE type PJW04_20610 IPR011990 Tetratricopeptide-like helical domain superfamily PJW04_20615 IPR036624 Hcp1-like superfamily PJW04_20615 IPR008514 Type VI secretion system effector, Hcp PJW04_20620 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath PJW04_20625 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 PJW04_20640 IPR001451 Hexapeptide repeat PJW04_20640 IPR018357 Hexapeptide transferase, conserved site PJW04_20640 IPR024688 Maltose/galactoside acetyltransferase PJW04_20640 IPR011004 Trimeric LpxA-like superfamily PJW04_20650 IPR014016 UvrD-like helicase, ATP-binding domain PJW04_20650 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_20650 IPR034739 UvrD/AddA helicase, N-terminal PJW04_20650 IPR005753 DNA helicase, ATP-dependent, UvrD type PJW04_20650 IPR000212 DNA helicase, UvrD/REP type PJW04_20650 IPR014017 UvrD-like DNA helicase, C-terminal PJW04_20650 IPR013986 DExx box DNA helicase domain superfamily PJW04_20665 IPR022924 Cardiolipin synthase PJW04_20665 IPR027379 Cardiolipin synthase N-terminal PJW04_20665 IPR025202 Phospholipase D-like domain PJW04_20665 IPR001736 Phospholipase D/Transphosphatidylase PJW04_20665 IPR030874 Cardiolipin synthase, Firmicutes-type PJW04_20670 IPR036390 Winged helix DNA-binding domain superfamily PJW04_20670 IPR000847 Transcription regulator HTH, LysR PJW04_20670 IPR005119 LysR, substrate-binding PJW04_20670 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_20675 IPR014165 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase PJW04_20675 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily PJW04_20675 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein PJW04_20680 IPR007400 PrpF protein PJW04_20685 IPR032465 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase PJW04_20685 IPR006680 Amidohydrolase-related PJW04_20685 IPR032466 Metal-dependent hydrolase PJW04_20690 IPR038584 Ribosomal protein L33 superfamily PJW04_20690 IPR001705 Ribosomal protein L33 PJW04_20690 IPR011332 Zinc-binding ribosomal protein PJW04_20690 IPR018264 Ribosomal protein L33, conserved site PJW04_20695 IPR001383 Ribosomal protein L28 PJW04_20695 IPR037147 Ribosomal protein L28/L24 superfamily PJW04_20695 IPR026569 Ribosomal protein L28/L24 PJW04_20695 IPR034704 L28p-like PJW04_20705 IPR001036 Acriflavin resistance protein PJW04_20705 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PJW04_20705 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA PJW04_20710 IPR039562 Membrane fusion protein, biotin-lipoyl like domain PJW04_20710 IPR022824 Multidrug resistance protein MdtA PJW04_20710 IPR006143 RND efflux pump, membrane fusion protein PJW04_20730 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW04_20730 IPR003682 rRNA small subunit methyltransferase G PJW04_20735 IPR032093 Phospholipase D, N-terminal PJW04_20735 IPR018946 Alkaline phosphatase D-related PJW04_20735 IPR008963 Purple acid phosphatase-like, N-terminal PJW04_20735 IPR038607 PhoD-like superfamily PJW04_20740 IPR018946 Alkaline phosphatase D-related PJW04_20740 IPR038607 PhoD-like superfamily PJW04_20740 IPR032093 Phospholipase D, N-terminal PJW04_20740 IPR008963 Purple acid phosphatase-like, N-terminal PJW04_20740 IPR006311 Twin-arginine translocation pathway, signal sequence PJW04_20745 IPR008278 4'-phosphopantetheinyl transferase domain PJW04_20745 IPR004568 Phosphopantetheine-protein transferase domain PJW04_20745 IPR037143 4'-phosphopantetheinyl transferase domain superfamily PJW04_20750 IPR007341 Transglycosylase-associated protein PJW04_20760 IPR004808 AP endonuclease 1 PJW04_20760 IPR020847 AP endonuclease 1, binding site PJW04_20760 IPR020848 AP endonuclease 1, conserved site PJW04_20760 IPR036691 Endonuclease/exonuclease/phosphatase superfamily PJW04_20760 IPR005135 Endonuclease/exonuclease/phosphatase PJW04_20760 IPR037493 Exodeoxyribonuclease III-like PJW04_20765 IPR014083 Cation/acetate symporter ActP PJW04_20765 IPR038377 Sodium/glucose symporter superfamily PJW04_20765 IPR001734 Sodium/solute symporter PJW04_20765 IPR018212 Sodium/solute symporter, conserved site PJW04_20770 IPR007436 Protein of unknown function DUF485 PJW04_20780 IPR042099 AMP-dependent synthetase-like superfamily PJW04_20780 IPR000873 AMP-dependent synthetase/ligase PJW04_20780 IPR025110 AMP-binding enzyme, C-terminal domain PJW04_20780 IPR020845 AMP-binding, conserved site PJW04_20780 IPR011904 Acetate-CoA ligase PJW04_20780 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain PJW04_20785 IPR001789 Signal transduction response regulator, receiver domain PJW04_20785 IPR000792 Transcription regulator LuxR, C-terminal PJW04_20785 IPR011006 CheY-like superfamily PJW04_20785 IPR016032 Signal transduction response regulator, C-terminal effector PJW04_20810 IPR006710 Glycoside hydrolase, family 43 PJW04_20810 IPR041542 Beta-xylosidase, C-terminal Concanavalin A-like domain PJW04_20810 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily PJW04_20810 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily PJW04_20820 IPR036812 NADP-dependent oxidoreductase domain superfamily PJW04_20820 IPR023210 NADP-dependent oxidoreductase domain PJW04_20830 IPR002347 Short-chain dehydrogenase/reductase SDR PJW04_20830 IPR020904 Short-chain dehydrogenase/reductase, conserved site PJW04_20830 IPR036291 NAD(P)-binding domain superfamily PJW04_20835 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily PJW04_20835 IPR011234 Fumarylacetoacetase-like, C-terminal PJW04_20840 IPR036849 Enolase-like, C-terminal domain superfamily PJW04_20840 IPR029017 Enolase-like, N-terminal PJW04_20840 IPR029065 Enolase C-terminal domain-like PJW04_20840 IPR034610 L-fuconate dehydratase PJW04_20840 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal PJW04_20840 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain PJW04_20845 IPR011008 Dimeric alpha-beta barrel PJW04_20845 IPR008000 Rhamnose/fucose mutarotase PJW04_20850 IPR036259 MFS transporter superfamily PJW04_20850 IPR020846 Major facilitator superfamily domain PJW04_20850 IPR005275 L-fucose permease FucP PJW04_20850 IPR011701 Major facilitator superfamily PJW04_20855 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_20855 IPR014757 Transcription regulator IclR, C-terminal PJW04_20855 IPR029016 GAF-like domain superfamily PJW04_20855 IPR005471 Transcription regulator IclR, N-terminal PJW04_20855 IPR036390 Winged helix DNA-binding domain superfamily PJW04_20860 IPR003810 Putative manganese efflux pump PJW04_20860 IPR022929 Putative manganese efflux pump MntP PJW04_20865 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_20865 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW04_20865 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PJW04_20865 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PJW04_20865 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_20865 IPR005467 Histidine kinase domain PJW04_20865 IPR000700 PAS-associated, C-terminal PJW04_20875 IPR008928 Six-hairpin glycosidase superfamily PJW04_20875 IPR012341 Six-hairpin glycosidase-like superfamily PJW04_20875 IPR033432 Glycosyl hydrolase 36, catalytic domain PJW04_20875 IPR037814 Cellobionic acid phosphorylase, N-terminal PJW04_20875 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily PJW04_20875 IPR010383 Glycosyl hydrolase 94 PJW04_20875 IPR011013 Galactose mutarotase-like domain superfamily PJW04_20880 IPR039672 Lactose permease-like PJW04_20880 IPR036259 MFS transporter superfamily PJW04_20880 IPR001927 Sodium:galactoside symporter PJW04_20880 IPR018043 Sodium:galactoside symporter, conserved site PJW04_20885 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_20885 IPR006001 Carbohydrate kinase, thermoresistant glucokinase PJW04_20890 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PJW04_20890 IPR002372 Pyrrolo-quinoline quinone repeat PJW04_20890 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily PJW04_20890 IPR015943 WD40/YVTN repeat-like-containing domain superfamily PJW04_20890 IPR025666 Pyrrolo-quinoline quinone-like domain PJW04_20930 IPR006530 YD repeat PJW04_20930 IPR022385 Rhs repeat-associated core PJW04_20930 IPR001826 RHS protein PJW04_20930 IPR031325 RHS repeat PJW04_20950 IPR007452 Translocation and assembly module TamB PJW04_20955 IPR000184 Bacterial surface antigen (D15) PJW04_20955 IPR035243 TamA, POTRA domain 1 PJW04_20955 IPR039910 Surface antigen D15-like PJW04_20960 IPR037066 TonB-dependent receptor, plug domain superfamily PJW04_20960 IPR000531 TonB-dependent receptor-like, beta-barrel PJW04_20960 IPR010916 TonB box, conserved site PJW04_20960 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PJW04_20960 IPR010917 TonB-dependent receptor, conserved site PJW04_20960 IPR039426 Vitamin B12 transporter BtuB-like PJW04_20960 IPR012910 TonB-dependent receptor, plug domain PJW04_20965 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_20965 IPR013026 Tetratricopeptide repeat-containing domain PJW04_20965 IPR011990 Tetratricopeptide-like helical domain superfamily PJW04_20965 IPR019734 Tetratricopeptide repeat PJW04_20970 IPR006194 Glycine-tRNA synthetase, heterodimeric PJW04_20970 IPR015944 Glycine-tRNA ligase, beta subunit PJW04_20970 IPR008909 DALR anticodon binding PJW04_20975 IPR006194 Glycine-tRNA synthetase, heterodimeric PJW04_20975 IPR002310 Glycine-tRNA ligase, alpha subunit PJW04_20980 IPR003593 AAA+ ATPase domain PJW04_20980 IPR007831 General secretory system II, protein E, N-terminal PJW04_20980 IPR037257 General secretory system II, protein E, N-terminal superfamily PJW04_20980 IPR001482 Type II/IV secretion system protein PJW04_20980 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_20980 IPR013374 ATPase, type IV, pilus assembly, PilB PJW04_20980 IPR042181 Type II secretion system, protein E, N-terminal PJW04_20990 IPR029062 Class I glutamine amidotransferase-like PJW04_20990 IPR001674 GMP synthase, C-terminal PJW04_20990 IPR004739 GMP synthase, glutamine amidotransferase PJW04_20990 IPR022955 GMP synthase PJW04_20990 IPR025777 GMP synthetase ATP pyrophosphatase domain PJW04_20990 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PJW04_20990 IPR017926 Glutamine amidotransferase PJW04_21000 IPR019820 Sec-independent periplasmic protein translocase, conserved site PJW04_21000 IPR002033 Sec-independent periplasmic protein translocase TatC PJW04_21005 IPR003369 Sec-independent protein translocase protein TatA/B/E PJW04_21005 IPR018448 Twin-arginine translocation protein TatB PJW04_21010 IPR003369 Sec-independent protein translocase protein TatA/B/E PJW04_21010 IPR006312 Sec-independent protein translocase protein TatA/E PJW04_21020 IPR033659 Ferrochelatase, N-terminal PJW04_21020 IPR001015 Ferrochelatase PJW04_21020 IPR019772 Ferrochelatase, active site PJW04_21020 IPR033644 Ferrochelatase, C-terminal PJW04_21025 IPR029058 Alpha/Beta hydrolase fold PJW04_21025 IPR000073 Alpha/beta hydrolase fold-1 PJW04_21025 IPR000639 Epoxide hydrolase-like PJW04_21040 IPR007476 Putative exonuclease, RdgC PJW04_21045 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type PJW04_21045 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase PJW04_21045 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PJW04_21045 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal PJW04_21050 IPR001998 Xylose isomerase PJW04_21050 IPR013452 Xylose isomerase, bacterial-type PJW04_21050 IPR036237 Xylose isomerase-like superfamily PJW04_21055 IPR028082 Periplasmic binding protein-like I PJW04_21055 IPR010982 Lambda repressor-like, DNA-binding domain superfamily PJW04_21055 IPR000843 LacI-type HTH domain PJW04_21055 IPR006377 Catabolite control protein A PJW04_21065 IPR037054 Alpha-glucuronidase, C-terminal domain superfamily PJW04_21065 IPR011395 Alpha glucuronidase PJW04_21065 IPR005154 Alpha glucuronidase, N-terminal PJW04_21065 IPR011099 Glycosyl hydrolase family 67, C-terminal PJW04_21065 IPR011100 Glycosyl hydrolase family 67, catalytic domain PJW04_21065 IPR017853 Glycoside hydrolase superfamily PJW04_21065 IPR029018 Beta-hexosaminidase-like, domain 2 PJW04_21075 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain PJW04_21075 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal PJW04_21075 IPR034593 Mandelate racemase-like PJW04_21075 IPR029017 Enolase-like, N-terminal PJW04_21075 IPR029065 Enolase C-terminal domain-like PJW04_21075 IPR036849 Enolase-like, C-terminal domain superfamily PJW04_21075 IPR034589 D-mannonate dehydratase-like PJW04_21075 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site PJW04_21080 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily PJW04_21080 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily PJW04_21080 IPR006710 Glycoside hydrolase, family 43 PJW04_21080 IPR041542 Beta-xylosidase, C-terminal Concanavalin A-like domain PJW04_21085 IPR037524 PA14/GLEYA domain PJW04_21085 IPR013783 Immunoglobulin-like fold PJW04_21085 IPR017853 Glycoside hydrolase superfamily PJW04_21085 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily PJW04_21085 IPR001764 Glycoside hydrolase, family 3, N-terminal PJW04_21085 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily PJW04_21085 IPR002772 Glycoside hydrolase family 3 C-terminal domain PJW04_21085 IPR026891 Fibronectin type III-like domain PJW04_21085 IPR011658 PA14 domain PJW04_21090 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily PJW04_21090 IPR013118 Mannitol dehydrogenase, C-terminal PJW04_21090 IPR023027 Mannitol dehydrogenase, conserved site PJW04_21090 IPR013131 Mannitol dehydrogenase, N-terminal PJW04_21090 IPR036291 NAD(P)-binding domain superfamily PJW04_21090 IPR013328 6-phosphogluconate dehydrogenase, domain 2 PJW04_21090 IPR000669 Mannitol dehydrogenase PJW04_21125 IPR016161 Aldehyde/histidinol dehydrogenase PJW04_21125 IPR016163 Aldehyde dehydrogenase, C-terminal PJW04_21125 IPR016160 Aldehyde dehydrogenase, cysteine active site PJW04_21125 IPR029510 Aldehyde dehydrogenase, glutamic acid active site PJW04_21125 IPR016162 Aldehyde dehydrogenase, N-terminal PJW04_21125 IPR015590 Aldehyde dehydrogenase domain PJW04_21125 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent PJW04_21140 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PJW04_21140 IPR015424 Pyridoxal phosphate-dependent transferase PJW04_21140 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PJW04_21140 IPR005814 Aminotransferase class-III PJW04_21140 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase PJW04_21150 IPR018485 Carbohydrate kinase, FGGY, C-terminal PJW04_21150 IPR006000 Xylulokinase PJW04_21150 IPR018484 Carbohydrate kinase, FGGY, N-terminal PJW04_21150 IPR018483 Carbohydrate kinase, FGGY, conserved site PJW04_21150 IPR000577 Carbohydrate kinase, FGGY PJW04_21165 IPR011042 Six-bladed beta-propeller, TolB-like PJW04_21165 IPR013658 SMP-30/Gluconolactonase/LRE-like region PJW04_21165 IPR005511 Senescence marker protein-30 (SMP-30) PJW04_21165 IPR006311 Twin-arginine translocation pathway, signal sequence PJW04_21170 IPR017853 Glycoside hydrolase superfamily PJW04_21170 IPR031158 Glycosyl hydrolases family 10, active site PJW04_21170 IPR001000 Glycoside hydrolase family 10 domain PJW04_21175 IPR008979 Galactose-binding-like domain superfamily PJW04_21175 IPR032311 Domain of unknown function DUF4982 PJW04_21175 IPR013783 Immunoglobulin-like fold PJW04_21175 IPR017853 Glycoside hydrolase superfamily PJW04_21175 IPR006104 Glycosyl hydrolases family 2, sugar binding domain PJW04_21175 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich PJW04_21175 IPR006103 Glycoside hydrolase family 2, catalytic domain PJW04_21175 IPR023232 Glycoside hydrolase, family 2, active site PJW04_21175 IPR006101 Glycoside hydrolase, family 2 PJW04_21175 IPR040605 Glycoside hydrolase family 2, domain 5 PJW04_21175 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily PJW04_21175 IPR008964 Invasin/intimin cell-adhesion fragments PJW04_21180 IPR003766 Uronate isomerase PJW04_21180 IPR032466 Metal-dependent hydrolase PJW04_21185 IPR017853 Glycoside hydrolase superfamily PJW04_21185 IPR031158 Glycosyl hydrolases family 10, active site PJW04_21185 IPR001000 Glycoside hydrolase family 10 domain PJW04_21185 IPR008979 Galactose-binding-like domain superfamily PJW04_21185 IPR005084 Carbohydrate binding module family 6 PJW04_21185 IPR018366 Carbohydrate-binding type-2, conserved site PJW04_21185 IPR012291 CBM2, carbohydrate-binding domain superfamily PJW04_21185 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily PJW04_21185 IPR001919 Carbohydrate-binding type-2 domain PJW04_21200 IPR005084 Carbohydrate binding module family 6 PJW04_21200 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily PJW04_21200 IPR012291 CBM2, carbohydrate-binding domain superfamily PJW04_21200 IPR018366 Carbohydrate-binding type-2, conserved site PJW04_21200 IPR008979 Galactose-binding-like domain superfamily PJW04_21200 IPR001000 Glycoside hydrolase family 10 domain PJW04_21200 IPR031158 Glycosyl hydrolases family 10, active site PJW04_21200 IPR017853 Glycoside hydrolase superfamily PJW04_21200 IPR001919 Carbohydrate-binding type-2 domain PJW04_21215 IPR036259 MFS transporter superfamily PJW04_21215 IPR039672 Lactose permease-like PJW04_21215 IPR001927 Sodium:galactoside symporter PJW04_21215 IPR018043 Sodium:galactoside symporter, conserved site PJW04_21220 IPR006710 Glycoside hydrolase, family 43 PJW04_21220 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily PJW04_21250 IPR016039 Thiolase-like PJW04_21250 IPR006162 Phosphopantetheine attachment site PJW04_21250 IPR009081 Phosphopantetheine binding ACP domain PJW04_21250 IPR020806 Polyketide synthase, phosphopantetheine-binding domain PJW04_21250 IPR013968 Polyketide synthase, ketoreductase domain PJW04_21250 IPR020843 Polyketide synthase, enoylreductase domain PJW04_21250 IPR042104 Polyketide synthase, dehydratase domain superfamily PJW04_21250 IPR020807 Polyketide synthase, dehydratase domain PJW04_21250 IPR014043 Acyl transferase PJW04_21250 IPR032821 Ketoacyl-synthetase, C-terminal extension PJW04_21250 IPR036291 NAD(P)-binding domain superfamily PJW04_21250 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding PJW04_21250 IPR014030 Beta-ketoacyl synthase, N-terminal PJW04_21250 IPR001227 Acyl transferase domain superfamily PJW04_21250 IPR018201 Beta-ketoacyl synthase, active site PJW04_21250 IPR011032 GroES-like superfamily PJW04_21250 IPR013154 Alcohol dehydrogenase, N-terminal PJW04_21250 IPR013149 Alcohol dehydrogenase, C-terminal PJW04_21250 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase PJW04_21250 IPR036736 ACP-like superfamily PJW04_21250 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain PJW04_21250 IPR014031 Beta-ketoacyl synthase, C-terminal PJW04_21260 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase PJW04_21260 IPR041728 GPAT/DHAPAT, acyltransferase domain PJW04_21260 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB PJW04_21260 IPR002123 Phospholipid/glycerol acyltransferase PJW04_21270 IPR028082 Periplasmic binding protein-like I PJW04_21270 IPR010982 Lambda repressor-like, DNA-binding domain superfamily PJW04_21270 IPR000843 LacI-type HTH domain PJW04_21270 IPR006377 Catabolite control protein A PJW04_21285 IPR036188 FAD/NAD(P)-binding domain superfamily PJW04_21285 IPR033856 Flavin-dependent tryptophan halogenase PJW04_21285 IPR006905 Flavin-dependent halogenase PJW04_21290 IPR011060 Ribulose-phosphate binding barrel PJW04_21290 IPR001754 Orotidine 5'-phosphate decarboxylase domain PJW04_21290 IPR014732 Orotidine 5'-phosphate decarboxylase PJW04_21290 IPR013785 Aldolase-type TIM barrel PJW04_21290 IPR018089 Orotidine 5'-phosphate decarboxylase, active site PJW04_21295 IPR005519 Acid phosphatase, class B-like PJW04_21295 IPR036412 HAD-like superfamily PJW04_21295 IPR023214 HAD superfamily PJW04_21295 IPR006423 5-nucleotidase lipoprotein e(P4) PJW04_21300 IPR007432 Protein of unknown function DUF480 PJW04_21300 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_21300 IPR036390 Winged helix DNA-binding domain superfamily PJW04_21315 IPR014017 UvrD-like DNA helicase, C-terminal PJW04_21315 IPR000212 DNA helicase, UvrD/REP type PJW04_21315 IPR013986 DExx box DNA helicase domain superfamily PJW04_21315 IPR034739 UvrD/AddA helicase, N-terminal PJW04_21315 IPR005752 ATP-dependent DNA helicase Rep PJW04_21315 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_21315 IPR014016 UvrD-like helicase, ATP-binding domain PJW04_21320 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_21320 IPR001267 Thymidine kinase PJW04_21325 IPR003018 GAF domain PJW04_21325 IPR029016 GAF-like domain superfamily PJW04_21325 IPR003594 Histidine kinase/HSP90-like ATPase PJW04_21325 IPR005467 Histidine kinase domain PJW04_21325 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PJW04_21325 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PJW04_21325 IPR035965 PAS domain superfamily PJW04_21325 IPR013654 PAS fold-2 PJW04_21325 IPR016132 Phytochrome chromophore attachment domain PJW04_21325 IPR013515 Phytochrome, central region PJW04_21325 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW04_21325 IPR001294 Phytochrome PJW04_21330 IPR023724 Glucan biosynthesis, MdoD PJW04_21330 IPR014756 Immunoglobulin E-set PJW04_21330 IPR013783 Immunoglobulin-like fold PJW04_21330 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal PJW04_21330 IPR014438 Glucan biosynthesis protein MdoG/MdoD PJW04_21330 IPR014718 Glycoside hydrolase-type carbohydrate-binding PJW04_21330 IPR011013 Galactose mutarotase-like domain superfamily PJW04_21330 IPR006311 Twin-arginine translocation pathway, signal sequence PJW04_21340 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site PJW04_21340 IPR020629 Formamidopyrimidine-DNA glycosylase PJW04_21340 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain PJW04_21340 IPR035937 MutM-like, N-terminal PJW04_21340 IPR010979 Ribosomal protein S13-like, H2TH PJW04_21340 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type PJW04_21340 IPR010663 Zinc finger, FPG/IleRS-type PJW04_21340 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding PJW04_21370 IPR004711 Benzoate transporter PJW04_21375 IPR035965 PAS domain superfamily PJW04_21375 IPR003018 GAF domain PJW04_21375 IPR029016 GAF-like domain superfamily PJW04_21375 IPR000014 PAS domain PJW04_21375 IPR013654 PAS fold-2 PJW04_21375 IPR016132 Phytochrome chromophore attachment domain PJW04_21375 IPR001294 Phytochrome PJW04_21375 IPR013515 Phytochrome, central region PJW04_21380 IPR016084 Haem oxygenase-like, multi-helical PJW04_21380 IPR016053 Haem oxygenase-like PJW04_21390 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase PJW04_21390 IPR014718 Glycoside hydrolase-type carbohydrate-binding PJW04_21390 IPR025532 Glucose-6-phosphate 1-epimerase PJW04_21390 IPR011013 Galactose mutarotase-like domain superfamily PJW04_21400 IPR023006 Uncharacterised protein family UPF0225 PJW04_21400 IPR004027 SEC-C motif PJW04_21400 IPR032710 NTF2-like domain superfamily PJW04_21405 IPR002781 Transmembrane protein TauE-like PJW04_21425 IPR020602 GTP cyclohydrolase I domain PJW04_21425 IPR018234 GTP cyclohydrolase I, conserved site PJW04_21425 IPR001474 GTP cyclohydrolase I PJW04_21435 IPR012451 Protein of unknown function DUF1656 PJW04_21440 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PJW04_21440 IPR006143 RND efflux pump, membrane fusion protein PJW04_21450 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein PJW04_21455 IPR020846 Major facilitator superfamily domain PJW04_21455 IPR005829 Sugar transporter, conserved site PJW04_21455 IPR004736 MFS transporter, metabolite:H symporter PJW04_21455 IPR036259 MFS transporter superfamily PJW04_21455 IPR005828 Major facilitator, sugar transporter-like PJW04_21465 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_21465 IPR005119 LysR, substrate-binding PJW04_21465 IPR000847 Transcription regulator HTH, LysR PJW04_21465 IPR036390 Winged helix DNA-binding domain superfamily PJW04_21470 IPR036291 NAD(P)-binding domain superfamily PJW04_21470 IPR020904 Short-chain dehydrogenase/reductase, conserved site PJW04_21470 IPR002347 Short-chain dehydrogenase/reductase SDR PJW04_21475 IPR002745 Phosphotransferase KptA/Tpt1 PJW04_21475 IPR042081 RNA 2'-phosphotransferase, C-terminal domain PJW04_21475 IPR022928 RNA 2'-phosphotransferase KptA, putative PJW04_21475 IPR042080 RNA 2'-phosphotransferase, N-terminal domain PJW04_21480 IPR030874 Cardiolipin synthase, Firmicutes-type PJW04_21480 IPR022924 Cardiolipin synthase PJW04_21480 IPR027379 Cardiolipin synthase N-terminal PJW04_21480 IPR025202 Phospholipase D-like domain PJW04_21480 IPR001736 Phospholipase D/Transphosphatidylase PJW04_21535 IPR020103 Pseudouridine synthase, catalytic domain superfamily PJW04_21535 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site PJW04_21535 IPR006145 Pseudouridine synthase, RsuA/RluA PJW04_21560 IPR001584 Integrase, catalytic core PJW04_21560 IPR036397 Ribonuclease H superfamily PJW04_21560 IPR012337 Ribonuclease H-like superfamily PJW04_21560 IPR025948 HTH-like domain PJW04_21565 IPR036397 Ribonuclease H superfamily PJW04_21565 IPR012337 Ribonuclease H-like superfamily PJW04_21565 IPR001584 Integrase, catalytic core PJW04_21565 IPR025948 HTH-like domain PJW04_21580 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PJW04_21580 IPR001647 DNA-binding HTH domain, TetR-type PJW04_21580 IPR009057 Homeobox-like domain superfamily PJW04_21585 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PJW04_21585 IPR001647 DNA-binding HTH domain, TetR-type PJW04_21585 IPR009057 Homeobox-like domain superfamily PJW04_21585 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PJW04_21590 IPR036291 NAD(P)-binding domain superfamily PJW04_21590 IPR002347 Short-chain dehydrogenase/reductase SDR PJW04_21625 IPR010982 Lambda repressor-like, DNA-binding domain superfamily PJW04_21625 IPR013430 Toxin-antitoxin system, antidote protein, HigA PJW04_21625 IPR001387 Cro/C1-type helix-turn-helix domain PJW04_21635 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_21635 IPR006344 RecBCD enzyme subunit RecD PJW04_21635 IPR027785 UvrD-like helicase C-terminal domain PJW04_21640 IPR014017 UvrD-like DNA helicase, C-terminal PJW04_21640 IPR000212 DNA helicase, UvrD/REP type PJW04_21640 IPR011604 Exonuclease, phage-type/RecB, C-terminal PJW04_21640 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_21640 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type PJW04_21640 IPR004586 RecBCD enzyme subunit RecB PJW04_21640 IPR011335 Restriction endonuclease type II-like PJW04_21640 IPR014016 UvrD-like helicase, ATP-binding domain PJW04_21640 IPR034739 UvrD/AddA helicase, N-terminal PJW04_21645 IPR006697 RecBCD enzyme subunit RecC PJW04_21645 IPR041500 RecC, C-terminal PJW04_21645 IPR011335 Restriction endonuclease type II-like PJW04_21645 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_21645 IPR013986 DExx box DNA helicase domain superfamily PJW04_21680 IPR003593 AAA+ ATPase domain PJW04_21680 IPR003439 ABC transporter-like PJW04_21680 IPR017871 ABC transporter, conserved site PJW04_21680 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl PJW04_21680 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_21685 IPR003453 ABC transport permease subunit MlaE, Proteobacteria PJW04_21685 IPR030802 ABC transporter permease MalE PJW04_21690 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD PJW04_21690 IPR003399 Mce/MlaD PJW04_21695 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC PJW04_21695 IPR042245 Tgt2/MlaC superfamily PJW04_21705 IPR007428 MlaA lipoprotein PJW04_21715 IPR033674 Thioredoxin/glutathione peroxidase BtuE PJW04_21715 IPR000889 Glutathione peroxidase PJW04_21715 IPR029759 Glutathione peroxidase active site PJW04_21715 IPR029760 Glutathione peroxidase conserved site PJW04_21715 IPR036249 Thioredoxin-like superfamily PJW04_21725 IPR003798 DNA recombination RmuC PJW04_21730 IPR013149 Alcohol dehydrogenase, C-terminal PJW04_21730 IPR013154 Alcohol dehydrogenase, N-terminal PJW04_21730 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 PJW04_21730 IPR011032 GroES-like superfamily PJW04_21730 IPR036291 NAD(P)-binding domain superfamily PJW04_21730 IPR020843 Polyketide synthase, enoylreductase domain PJW04_21730 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site PJW04_21735 IPR000847 Transcription regulator HTH, LysR PJW04_21735 IPR036388 Winged helix-like DNA-binding domain superfamily PJW04_21735 IPR036390 Winged helix DNA-binding domain superfamily PJW04_21735 IPR005119 LysR, substrate-binding PJW04_21755 IPR002293 Amino acid/polyamine transporter I PJW04_21755 IPR004758 Amino acid transporter PJW04_21760 IPR005887 Alpha-1,2-mannosidase, putative PJW04_21760 IPR008928 Six-hairpin glycosidase superfamily PJW04_21760 IPR012939 Glycosyl hydrolase family 92 PJW04_21760 IPR014718 Glycoside hydrolase-type carbohydrate-binding PJW04_21760 IPR041371 Glycosyl hydrolase family 92 N-terminal domain PJW04_21765 IPR000531 TonB-dependent receptor-like, beta-barrel PJW04_21765 IPR010101 TonB-dependent vitamin B12 transporter BtuB PJW04_21765 IPR039426 Vitamin B12 transporter BtuB-like PJW04_21765 IPR012910 TonB-dependent receptor, plug domain PJW04_21765 IPR037066 TonB-dependent receptor, plug domain superfamily PJW04_21765 IPR010916 TonB box, conserved site PJW04_21765 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PJW04_21765 IPR010917 TonB-dependent receptor, conserved site PJW04_21770 IPR024399 Protein of unknown function DUF2628 PJW04_21775 IPR029016 GAF-like domain superfamily PJW04_21775 IPR000160 GGDEF domain PJW04_21775 IPR029787 Nucleotide cyclase PJW04_21780 IPR025736 PucR C-terminal helix-turn-helix domain PJW04_21780 IPR041522 CdaR, GGDEF-like domain PJW04_21780 IPR042070 PucR C-terminal helix-turn-helix domain superfamily PJW04_21780 IPR008599 Putative sugar diacid recognition PJW04_21785 IPR018193 Glycerate kinase, flavodoxin-like fold PJW04_21785 IPR004381 Glycerate kinase PJW04_21785 IPR036129 Glycerate kinase superfamily PJW04_21785 IPR018197 Glycerate kinase, restriction-enzyme-like fold PJW04_21790 IPR036259 MFS transporter superfamily PJW04_21790 IPR020846 Major facilitator superfamily domain PJW04_21790 IPR011701 Major facilitator superfamily PJW04_21805 IPR015947 PUA-like superfamily PJW04_21805 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW04_21805 IPR019614 S-adenosylmethionine-dependent methyltransferase PJW04_21805 IPR023542 rRNA large subunit methyltransferase I PJW04_21805 IPR041532 RlmI, PUA-like domain PJW04_21805 IPR036974 PUA domain superfamily PJW04_21805 IPR002478 PUA domain PJW04_21810 IPR005496 Integral membrane protein TerC PJW04_21810 IPR022369 Integral membrane protein TerC, riboswitch-linked PJW04_21815 IPR035952 Rhomboid-like superfamily PJW04_21815 IPR022764 Peptidase S54, rhomboid domain PJW04_21820 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily PJW04_21820 IPR030395 Glycerophosphodiester phosphodiesterase domain PJW04_21830 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PJW04_21830 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily PJW04_21830 IPR018296 Acid phosphatase, class A, bacterial, conserved site PJW04_21830 IPR001011 Acid phosphatase, class A, bacterial PJW04_21835 IPR027368 tRNA modification GTPase MnmE domain 2 PJW04_21835 IPR006073 GTP binding domain PJW04_21835 IPR018948 GTP-binding protein TrmE, N-terminal PJW04_21835 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 PJW04_21835 IPR031168 TrmE-type guanine nucleotide-binding domain PJW04_21835 IPR005225 Small GTP-binding protein domain PJW04_21835 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_21835 IPR025867 MnmE, helical domain PJW04_21835 IPR004520 tRNA modification GTPase MnmE PJW04_21840 IPR026402 Chitooligosaccharide deacetylase NodB PJW04_21840 IPR002509 NodB homology domain PJW04_21840 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel PJW04_21850 IPR019998 Membrane insertase YidC PJW04_21850 IPR028055 Membrane insertase YidC/Oxa1, C-terminal PJW04_21850 IPR038221 YidC, periplasmic domain superfamily PJW04_21850 IPR028053 Membrane insertase YidC, N-terminal PJW04_21850 IPR038210 Membrane insertase YidC, periplasmic domain PJW04_21850 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 PJW04_21855 IPR020539 Ribonuclease P, conserved site PJW04_21855 IPR000100 Ribonuclease P PJW04_21855 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PJW04_21855 IPR020568 Ribosomal protein S5 domain 2-type fold PJW04_21860 IPR020939 Ribosomal protein L34, conserved site PJW04_21860 IPR000271 Ribosomal protein L34 PJW04_21900 IPR003688 Type IV secretion system protein TraG/VirD4 PJW04_21900 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_21930 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_21930 IPR014149 Conjugative transfer, TrbB PJW04_21930 IPR001482 Type II/IV secretion system protein PJW04_21945 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain PJW04_21945 IPR003593 AAA+ ATPase domain PJW04_21945 IPR004346 CagE, TrbE, VirB component of type IV transporter system PJW04_21945 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_21960 IPR007688 Plasmid conjugal transfer TrbL/VirB6 PJW04_21960 IPR014150 Conjugal transfer, TrbL PJW04_21975 IPR042217 Type IV secretion system, VirB10/TrbI PJW04_21975 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI PJW04_21995 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 PJW04_21995 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 PJW04_21995 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 PJW04_21995 IPR013497 DNA topoisomerase, type IA, central PJW04_21995 IPR023406 DNA topoisomerase, type IA, active site PJW04_21995 IPR005738 DNA topoisomerase III PJW04_21995 IPR000380 DNA topoisomerase, type IA PJW04_21995 IPR003601 DNA topoisomerase, type IA, domain 2 PJW04_21995 IPR006171 TOPRIM domain PJW04_21995 IPR034144 DNA topoisomerase 3-like, TOPRIM domain PJW04_21995 IPR023405 DNA topoisomerase, type IA, core domain PJW04_21995 IPR003602 DNA topoisomerase, type IA, DNA-binding domain PJW04_22045 IPR024467 Domain of unknown function DUF2384 PJW04_22045 IPR021139 NYN domain, limkain-b1-type PJW04_22065 IPR005083 Serine/Threonine acetyltransferase, YopJ PJW04_22170 IPR018117 DNA methylase, C-5 cytosine-specific, active site PJW04_22170 IPR001525 C-5 cytosine methyltransferase PJW04_22170 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site PJW04_22170 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW04_22220 IPR025669 AAA domain PJW04_22220 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_22225 IPR004437 ParB/RepB/Spo0J partition protein PJW04_22225 IPR003115 ParB/Sulfiredoxin PJW04_22225 IPR036086 ParB/Sulfiredoxin superfamily PJW04_22245 IPR036737 OmpA-like domain superfamily PJW04_22245 IPR006665 OmpA-like domain PJW04_22270 IPR014155 Type IV secretion system protein VirB11 PJW04_22270 IPR001482 Type II/IV secretion system protein PJW04_22270 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PJW04_22270 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_22275 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI PJW04_22275 IPR042217 Type IV secretion system, VirB10/TrbI PJW04_22280 IPR010258 Conjugal transfer, TrbG/VirB9/CagX PJW04_22280 IPR033645 VirB9/CagX/TrbG, C-terminal PJW04_22280 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily PJW04_22280 IPR014148 P-type conjugative transfer protein VirB9 PJW04_22285 IPR026264 Type IV secretion system protein VirB8/PtlE PJW04_22285 IPR032710 NTF2-like domain superfamily PJW04_22285 IPR007430 Bacterial virulence protein VirB8 PJW04_22295 IPR007688 Plasmid conjugal transfer TrbL/VirB6 PJW04_22305 IPR014158 Type IV secretion system, VirB5 PJW04_22305 IPR023220 Type IV secretion system, VirB5-domain PJW04_22310 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_22310 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain PJW04_22310 IPR004346 CagE, TrbE, VirB component of type IV transporter system PJW04_22315 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_22315 IPR004346 CagE, TrbE, VirB component of type IV transporter system PJW04_22315 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain PJW04_22320 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB PJW04_22325 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 PJW04_22330 IPR028612 DNA topoisomerase I, type IA PJW04_22330 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 PJW04_22330 IPR006171 TOPRIM domain PJW04_22330 IPR034149 DNA topoisomerase 1, TOPRIM domain PJW04_22330 IPR013498 DNA topoisomerase, type IA, zn finger PJW04_22330 IPR003602 DNA topoisomerase, type IA, DNA-binding domain PJW04_22330 IPR023405 DNA topoisomerase, type IA, core domain PJW04_22330 IPR005733 DNA topoisomerase I, bacterial-type PJW04_22330 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 PJW04_22330 IPR000380 DNA topoisomerase, type IA PJW04_22330 IPR013497 DNA topoisomerase, type IA, central PJW04_22330 IPR023406 DNA topoisomerase, type IA, active site PJW04_22330 IPR003601 DNA topoisomerase, type IA, domain 2 PJW04_22330 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 PJW04_22335 IPR023346 Lysozyme-like domain superfamily PJW04_22335 IPR008258 Transglycosylase SLT domain 1 PJW04_22380 IPR036597 Fido-like domain superfamily PJW04_22380 IPR041533 Bartonella effector protein, BID domain PJW04_22380 IPR003812 Fido domain PJW04_22410 IPR006120 Resolvase, HTH domain PJW04_22410 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily PJW04_22410 IPR006118 Recombinase, conserved site PJW04_22410 IPR006119 Resolvase, N-terminal catalytic domain PJW04_22410 IPR009057 Homeobox-like domain superfamily PJW04_22415 IPR006118 Recombinase, conserved site PJW04_22415 IPR006120 Resolvase, HTH domain PJW04_22415 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily PJW04_22415 IPR006119 Resolvase, N-terminal catalytic domain PJW04_22435 IPR025296 Domain of unknown function DUF4158 PJW04_22435 IPR002513 Tn3 transposase DDE domain PJW04_22510 IPR025669 AAA domain PJW04_22510 IPR009061 Putative DNA-binding domain superfamily PJW04_22510 IPR000551 MerR-type HTH domain PJW04_22510 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW04_22510 IPR017818 Plasmid partitioning protein, RepA PJW04_22515 IPR009057 Homeobox-like domain superfamily PJW04_22515 IPR006118 Recombinase, conserved site PJW04_22515 IPR006119 Resolvase, N-terminal catalytic domain PJW04_22515 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily PJW04_22515 IPR006120 Resolvase, HTH domain