BJD13_03215 ad874a20c0f7700fb360d7cf41d25c16 902 SUPERFAMILY SSF52156 685 809 1.02E-33 T 17-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily BJD13_03215 ad874a20c0f7700fb360d7cf41d25c16 902 SUPERFAMILY SSF50447 574 657 3.12E-24 T 17-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BJD13_03215 ad874a20c0f7700fb360d7cf41d25c16 902 Gene3D G3DSA:3.30.56.50 3 52 3.3E-10 T 17-10-2018 BJD13_03215 ad874a20c0f7700fb360d7cf41d25c16 902 Pfam PF00009 Elongation factor Tu GTP binding domain 406 561 7.2E-33 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD13_03215 ad874a20c0f7700fb360d7cf41d25c16 902 Gene3D G3DSA:2.40.30.10 803 901 3.1E-31 T 17-10-2018 BJD13_03215 ad874a20c0f7700fb360d7cf41d25c16 902 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 70 105 1.9E-8 T 17-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial BJD13_03215 ad874a20c0f7700fb360d7cf41d25c16 902 Pfam PF11987 Translation-initiation factor 2 688 792 6.5E-35 T 17-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 BJD13_03215 ad874a20c0f7700fb360d7cf41d25c16 902 Gene3D G3DSA:2.40.30.10 573 690 3.9E-40 T 17-10-2018 BJD13_03215 ad874a20c0f7700fb360d7cf41d25c16 902 SUPERFAMILY SSF50447 804 900 8.73E-32 T 17-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BJD13_03215 ad874a20c0f7700fb360d7cf41d25c16 902 ProSitePatterns PS01176 Initiation factor 2 signature. 853 875 - T 17-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 BJD13_03215 ad874a20c0f7700fb360d7cf41d25c16 902 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 4 900 16.777 T 17-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 BJD13_03215 ad874a20c0f7700fb360d7cf41d25c16 902 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 325 375 2.1E-14 T 17-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal BJD13_03215 ad874a20c0f7700fb360d7cf41d25c16 902 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 403 560 3.1E-31 T 17-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BJD13_03215 ad874a20c0f7700fb360d7cf41d25c16 902 Gene3D G3DSA:3.40.50.300 399 572 4.8E-68 T 17-10-2018 BJD13_03215 ad874a20c0f7700fb360d7cf41d25c16 902 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 319 902 1.3E-245 T 17-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 BJD13_03215 ad874a20c0f7700fb360d7cf41d25c16 902 SUPERFAMILY SSF52540 398 568 2.76E-50 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_03215 ad874a20c0f7700fb360d7cf41d25c16 902 Gene3D G3DSA:3.40.50.10050 696 802 7.2E-35 T 17-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily BJD13_03215 ad874a20c0f7700fb360d7cf41d25c16 902 SUPERFAMILY SSF46955 4 52 1.1E-8 T 17-10-2018 IPR009061 Putative DNA-binding domain superfamily BJD13_04020 e3f526f949d951836dc27cef62b2edbd 1056 SUPERFAMILY SSF82866 296 497 8.89E-46 T 17-10-2018 BJD13_04020 e3f526f949d951836dc27cef62b2edbd 1056 Gene3D G3DSA:3.30.2090.10 179 275 0.0 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_04020 e3f526f949d951836dc27cef62b2edbd 1056 Gene3D G3DSA:1.20.1640.10 8 510 0.0 T 17-10-2018 BJD13_04020 e3f526f949d951836dc27cef62b2edbd 1056 SUPERFAMILY SSF82693 665 858 3.4E-25 T 17-10-2018 BJD13_04020 e3f526f949d951836dc27cef62b2edbd 1056 PRINTS PR00702 Acriflavin resistance protein family signature 617 631 2.6E-99 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_04020 e3f526f949d951836dc27cef62b2edbd 1056 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 2.6E-99 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_04020 e3f526f949d951836dc27cef62b2edbd 1056 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 2.6E-99 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_04020 e3f526f949d951836dc27cef62b2edbd 1056 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 2.6E-99 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_04020 e3f526f949d951836dc27cef62b2edbd 1056 PRINTS PR00702 Acriflavin resistance protein family signature 550 567 2.6E-99 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_04020 e3f526f949d951836dc27cef62b2edbd 1056 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 2.6E-99 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_04020 e3f526f949d951836dc27cef62b2edbd 1056 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 2.6E-99 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_04020 e3f526f949d951836dc27cef62b2edbd 1056 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 2.6E-99 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_04020 e3f526f949d951836dc27cef62b2edbd 1056 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 2.6E-99 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_04020 e3f526f949d951836dc27cef62b2edbd 1056 Gene3D G3DSA:3.30.70.1430 565 661 0.0 T 17-10-2018 BJD13_04020 e3f526f949d951836dc27cef62b2edbd 1056 SUPERFAMILY SSF82693 135 330 4.45E-21 T 17-10-2018 BJD13_04020 e3f526f949d951836dc27cef62b2edbd 1056 Gene3D G3DSA:3.30.2090.10 715 810 0.0 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_04020 e3f526f949d951836dc27cef62b2edbd 1056 Gene3D G3DSA:3.30.70.1440 662 867 0.0 T 17-10-2018 BJD13_04020 e3f526f949d951836dc27cef62b2edbd 1056 Gene3D G3DSA:1.20.1640.10 511 1024 0.0 T 17-10-2018 BJD13_04020 e3f526f949d951836dc27cef62b2edbd 1056 Pfam PF00873 AcrB/AcrD/AcrF family 1 1028 0.0 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_04020 e3f526f949d951836dc27cef62b2edbd 1056 Gene3D G3DSA:3.30.70.1320 133 332 0.0 T 17-10-2018 BJD13_04020 e3f526f949d951836dc27cef62b2edbd 1056 SUPERFAMILY SSF82714 182 271 3.4E-22 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_04020 e3f526f949d951836dc27cef62b2edbd 1056 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1040 0.0 T 17-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 BJD13_04020 e3f526f949d951836dc27cef62b2edbd 1056 SUPERFAMILY SSF82693 563 664 4.87E-28 T 17-10-2018 BJD13_04020 e3f526f949d951836dc27cef62b2edbd 1056 Gene3D G3DSA:3.30.70.1430 38 818 0.0 T 17-10-2018 BJD13_04020 e3f526f949d951836dc27cef62b2edbd 1056 SUPERFAMILY SSF82866 833 1028 6.28E-45 T 17-10-2018 BJD13_04020 e3f526f949d951836dc27cef62b2edbd 1056 SUPERFAMILY SSF82714 716 809 5.36E-15 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_04020 e3f526f949d951836dc27cef62b2edbd 1056 SUPERFAMILY SSF82693 38 132 3.79E-27 T 17-10-2018 BJD13_09855 caef764eaff69a5bfbeb0b93c153be3c 391 SUPERFAMILY SSF53901 3 267 1.98E-78 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 BJD13_09855 caef764eaff69a5bfbeb0b93c153be3c 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 17-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 BJD13_09855 caef764eaff69a5bfbeb0b93c153be3c 391 Gene3D G3DSA:3.40.47.10 126 388 1.8E-144 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 BJD13_09855 caef764eaff69a5bfbeb0b93c153be3c 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 389 3.4E-127 T 17-10-2018 IPR002155 Thiolase GO:0016747 BJD13_09855 caef764eaff69a5bfbeb0b93c153be3c 391 SUPERFAMILY SSF53901 269 390 1.15E-41 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 BJD13_09855 caef764eaff69a5bfbeb0b93c153be3c 391 Pfam PF02803 Thiolase, C-terminal domain 269 389 4.7E-44 T 17-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 BJD13_09855 caef764eaff69a5bfbeb0b93c153be3c 391 Gene3D G3DSA:3.40.47.10 5 274 1.8E-144 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 BJD13_09855 caef764eaff69a5bfbeb0b93c153be3c 391 PIRSF PIRSF000429 1 391 6.3E-115 T 17-10-2018 IPR002155 Thiolase GO:0016747 BJD13_09855 caef764eaff69a5bfbeb0b93c153be3c 391 Pfam PF00108 Thiolase, N-terminal domain 4 260 2.5E-87 T 17-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 BJD13_09855 caef764eaff69a5bfbeb0b93c153be3c 391 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 17-10-2018 IPR020610 Thiolase, active site GO:0016747 BJD13_10160 6096418ce3b023f357bc5c5ad8630831 135 Gene3D G3DSA:2.30.30.790 1 120 9.9E-11 T 17-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_10160 6096418ce3b023f357bc5c5ad8630831 135 Pfam PF01245 Ribosomal protein L19 8 116 1.8E-45 T 17-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_10160 6096418ce3b023f357bc5c5ad8630831 135 PRINTS PR00061 Ribosomal protein L19 signature 92 117 6.3E-36 T 17-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_10160 6096418ce3b023f357bc5c5ad8630831 135 PRINTS PR00061 Ribosomal protein L19 signature 8 37 6.3E-36 T 17-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_10160 6096418ce3b023f357bc5c5ad8630831 135 PRINTS PR00061 Ribosomal protein L19 signature 38 67 6.3E-36 T 17-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_10160 6096418ce3b023f357bc5c5ad8630831 135 ProSitePatterns PS01015 Ribosomal protein L19 signature. 90 105 - T 17-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_10160 6096418ce3b023f357bc5c5ad8630831 135 PIRSF PIRSF002191 1 135 8.3E-48 T 17-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_10160 6096418ce3b023f357bc5c5ad8630831 135 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 6 118 27.912 T 17-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_10160 6096418ce3b023f357bc5c5ad8630831 135 SUPERFAMILY SSF50104 10 121 7.22E-42 T 17-10-2018 IPR008991 Translation protein SH3-like domain superfamily BJD13_10160 6096418ce3b023f357bc5c5ad8630831 135 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 8 117 6.6E-44 T 17-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_18860 62973399e378d4d891100540826e438d 250 Pfam PF01223 DNA/RNA non-specific endonuclease 39 233 5.1E-44 T 17-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 BJD13_18860 62973399e378d4d891100540826e438d 250 SMART SM00892 49 239 4.7E-36 T 17-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 BJD13_18860 62973399e378d4d891100540826e438d 250 SUPERFAMILY SSF54060 26 247 5.59E-57 T 17-10-2018 BJD13_18860 62973399e378d4d891100540826e438d 250 Gene3D G3DSA:3.40.570.10 30 247 5.9E-50 T 17-10-2018 BJD13_18860 62973399e378d4d891100540826e438d 250 SMART SM00477 50 239 1.5E-27 T 17-10-2018 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 BJD13_18860 62973399e378d4d891100540826e438d 250 ProSitePatterns PS01070 DNA/RNA non-specific endonucleases active site. 111 119 - T 17-10-2018 IPR018524 DNA/RNA non-specific endonuclease, active site GO:0003676|GO:0016787|GO:0046872 BJD13_18480 786bb5452a1dc3d7f770eb921630da1b 558 Gene3D G3DSA:3.10.20.310 34 137 4.6E-11 T 17-10-2018 BJD13_18480 786bb5452a1dc3d7f770eb921630da1b 558 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 198 466 1.4E-27 T 17-10-2018 IPR005565 Haemolysin activator HlyB, C-terminal BJD13_18480 786bb5452a1dc3d7f770eb921630da1b 558 Gene3D G3DSA:2.40.160.50 171 558 7.3E-65 T 17-10-2018 BJD13_18480 786bb5452a1dc3d7f770eb921630da1b 558 Pfam PF08479 POTRA domain, ShlB-type 68 137 2.8E-7 T 17-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type BJD13_04595 ea7ec2e07952eb6c4b9db3aa71f72c4a 166 SUPERFAMILY SSF54593 19 163 2.01E-25 T 17-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD13_04595 ea7ec2e07952eb6c4b9db3aa71f72c4a 166 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 26 130 1.8E-12 T 17-10-2018 BJD13_04595 ea7ec2e07952eb6c4b9db3aa71f72c4a 166 Gene3D G3DSA:3.10.180.10 13 165 2.3E-31 T 17-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD13_02415 0c1cbd8afa1caed8708fb770049e110f 302 SUPERFAMILY SSF46689 189 238 3.98E-12 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_02415 0c1cbd8afa1caed8708fb770049e110f 302 Pfam PF06719 AraC-type transcriptional regulator N-terminus 25 175 3.5E-47 T 17-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal BJD13_02415 0c1cbd8afa1caed8708fb770049e110f 302 SUPERFAMILY SSF46689 241 291 5.38E-7 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_02415 0c1cbd8afa1caed8708fb770049e110f 302 Pfam PF12833 Helix-turn-helix domain 212 286 7.4E-19 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD13_02415 0c1cbd8afa1caed8708fb770049e110f 302 SMART SM00342 205 288 2.3E-20 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD13_02415 0c1cbd8afa1caed8708fb770049e110f 302 Gene3D G3DSA:1.10.10.60 184 294 5.2E-24 T 17-10-2018 BJD13_06300 72f5834368c9da82cdc93aaf03d202e6 373 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 11 372 5.0E-134 T 17-10-2018 IPR007434 Peptidogalycan biosysnthesis/recognition BJD13_06300 72f5834368c9da82cdc93aaf03d202e6 373 SUPERFAMILY SSF55729 183 352 5.04E-35 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD13_06300 72f5834368c9da82cdc93aaf03d202e6 373 Gene3D G3DSA:3.40.630.30 172 316 1.4E-7 T 17-10-2018 BJD13_06305 aeda37585f2bf20938696c8eb089791f 347 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 249 3.8E-17 T 17-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 BJD13_06305 aeda37585f2bf20938696c8eb089791f 347 Gene3D G3DSA:3.40.50.720 1 346 1.2E-77 T 17-10-2018 BJD13_06305 aeda37585f2bf20938696c8eb089791f 347 SUPERFAMILY SSF51735 1 341 7.67E-57 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_13340 2bbee79efd6aba716acefaf3f86845f7 301 Pfam PF03466 LysR substrate binding domain 94 293 3.0E-39 T 17-10-2018 IPR005119 LysR, substrate-binding BJD13_13340 2bbee79efd6aba716acefaf3f86845f7 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 8.3E-18 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_13340 2bbee79efd6aba716acefaf3f86845f7 301 SUPERFAMILY SSF46785 3 113 5.01E-22 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_13340 2bbee79efd6aba716acefaf3f86845f7 301 Gene3D G3DSA:3.40.190.290 94 298 8.4E-41 T 17-10-2018 BJD13_13340 2bbee79efd6aba716acefaf3f86845f7 301 SUPERFAMILY SSF53850 94 296 3.14E-41 T 17-10-2018 BJD13_13340 2bbee79efd6aba716acefaf3f86845f7 301 Gene3D G3DSA:1.10.10.10 3 89 1.3E-22 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_05020 8022bc1461dc1ea1af5e8a4eda027ebd 406 SUPERFAMILY SSF51905 142 314 2.92E-32 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_05020 8022bc1461dc1ea1af5e8a4eda027ebd 406 Gene3D G3DSA:3.30.390.30 320 404 6.8E-32 T 17-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 BJD13_05020 8022bc1461dc1ea1af5e8a4eda027ebd 406 Gene3D G3DSA:3.50.50.60 5 308 1.4E-96 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_05020 8022bc1461dc1ea1af5e8a4eda027ebd 406 Pfam PF14759 Reductase C-terminal 320 403 1.5E-29 T 17-10-2018 IPR028202 Reductase, C-terminal BJD13_05020 8022bc1461dc1ea1af5e8a4eda027ebd 406 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 145 163 4.4E-23 T 17-10-2018 BJD13_05020 8022bc1461dc1ea1af5e8a4eda027ebd 406 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 257 279 4.4E-23 T 17-10-2018 BJD13_05020 8022bc1461dc1ea1af5e8a4eda027ebd 406 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 231 247 4.4E-23 T 17-10-2018 BJD13_05020 8022bc1461dc1ea1af5e8a4eda027ebd 406 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 4.4E-23 T 17-10-2018 BJD13_05020 8022bc1461dc1ea1af5e8a4eda027ebd 406 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 4.4E-23 T 17-10-2018 BJD13_05020 8022bc1461dc1ea1af5e8a4eda027ebd 406 Gene3D G3DSA:3.50.50.60 113 238 1.4E-96 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_05020 8022bc1461dc1ea1af5e8a4eda027ebd 406 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 301 1.5E-57 T 17-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BJD13_05020 8022bc1461dc1ea1af5e8a4eda027ebd 406 SUPERFAMILY SSF51905 4 191 1.76E-42 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_05020 8022bc1461dc1ea1af5e8a4eda027ebd 406 SUPERFAMILY SSF55424 313 405 4.39E-29 T 17-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 BJD13_05020 8022bc1461dc1ea1af5e8a4eda027ebd 406 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 232 246 4.1E-17 T 17-10-2018 BJD13_05020 8022bc1461dc1ea1af5e8a4eda027ebd 406 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 145 170 4.1E-17 T 17-10-2018 BJD13_05020 8022bc1461dc1ea1af5e8a4eda027ebd 406 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 272 279 4.1E-17 T 17-10-2018 BJD13_05020 8022bc1461dc1ea1af5e8a4eda027ebd 406 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 4.1E-17 T 17-10-2018 BJD13_23020 effdc31497064954fdcc3a43483cc499 795 Pfam PF00593 TonB dependent receptor 274 793 2.6E-46 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_23020 effdc31497064954fdcc3a43483cc499 795 SUPERFAMILY SSF56935 36 795 1.68E-106 T 17-10-2018 BJD13_23020 effdc31497064954fdcc3a43483cc499 795 Gene3D G3DSA:2.40.170.20 177 771 1.0E-54 T 17-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BJD13_23020 effdc31497064954fdcc3a43483cc499 795 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 171 9.3E-23 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_23020 effdc31497064954fdcc3a43483cc499 795 Gene3D G3DSA:2.170.130.10 31 175 1.2E-34 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_23020 effdc31497064954fdcc3a43483cc499 795 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 43 - T 17-10-2018 IPR010916 TonB box, conserved site BJD13_22420 c5914466255f7019eed38caae2083e75 334 SUPERFAMILY SSF51569 4 333 2.2E-130 T 17-10-2018 BJD13_22420 c5914466255f7019eed38caae2083e75 334 Gene3D G3DSA:3.20.20.70 2 334 2.6E-150 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD13_22420 c5914466255f7019eed38caae2083e75 334 Pfam PF00274 Fructose-bisphosphate aldolase class-I 6 333 3.8E-137 T 17-10-2018 IPR000741 Fructose-bisphosphate aldolase, class-I GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD13_22420 c5914466255f7019eed38caae2083e75 334 ProSitePatterns PS00158 Fructose-bisphosphate aldolase class-I active site. 211 221 - T 17-10-2018 IPR029768 Fructose-bisphosphate aldolase class-I active site KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD13_21490 c29ef7f4b6ad8ff5b563c5fee6ae272b 242 SUPERFAMILY SSF46785 3 72 1.25E-19 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_21490 c29ef7f4b6ad8ff5b563c5fee6ae272b 242 Gene3D G3DSA:1.10.10.10 4 72 8.3E-22 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_21490 c29ef7f4b6ad8ff5b563c5fee6ae272b 242 SUPERFAMILY SSF64288 56 233 8.01E-38 T 17-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily BJD13_21490 c29ef7f4b6ad8ff5b563c5fee6ae272b 242 Gene3D G3DSA:3.40.1410.10 73 234 1.1E-32 T 17-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily BJD13_21490 c29ef7f4b6ad8ff5b563c5fee6ae272b 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 6.6E-9 T 17-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD13_21490 c29ef7f4b6ad8ff5b563c5fee6ae272b 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 6.6E-9 T 17-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD13_21490 c29ef7f4b6ad8ff5b563c5fee6ae272b 242 SMART SM00866 89 229 3.0E-31 T 17-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 BJD13_21490 c29ef7f4b6ad8ff5b563c5fee6ae272b 242 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 68 5.7E-18 T 17-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD13_21490 c29ef7f4b6ad8ff5b563c5fee6ae272b 242 Pfam PF07702 UTRA domain 89 227 5.5E-28 T 17-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 BJD13_21490 c29ef7f4b6ad8ff5b563c5fee6ae272b 242 SMART SM00345 9 68 4.9E-18 T 17-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD13_10890 5b13c772b82f9e7c0a49bd857d8ca780 514 Gene3D G3DSA:3.40.50.150 150 450 2.0E-71 T 17-10-2018 BJD13_10890 5b13c772b82f9e7c0a49bd857d8ca780 514 Gene3D G3DSA:1.20.1260.30 1 149 1.4E-44 T 17-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily BJD13_10890 5b13c772b82f9e7c0a49bd857d8ca780 514 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 263 269 - T 17-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 BJD13_10890 5b13c772b82f9e7c0a49bd857d8ca780 514 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 147 163 1.9E-20 T 17-10-2018 BJD13_10890 5b13c772b82f9e7c0a49bd857d8ca780 514 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 260 272 1.9E-20 T 17-10-2018 BJD13_10890 5b13c772b82f9e7c0a49bd857d8ca780 514 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 289 313 1.9E-20 T 17-10-2018 BJD13_10890 5b13c772b82f9e7c0a49bd857d8ca780 514 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 171 185 1.9E-20 T 17-10-2018 BJD13_10890 5b13c772b82f9e7c0a49bd857d8ca780 514 SUPERFAMILY SSF53335 4 491 5.46E-126 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_10890 5b13c772b82f9e7c0a49bd857d8ca780 514 Pfam PF12161 HsdM N-terminal domain 7 112 5.4E-10 T 17-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain BJD13_10890 5b13c772b82f9e7c0a49bd857d8ca780 514 Pfam PF02384 N-6 DNA Methylase 124 442 4.6E-74 T 17-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 BJD13_02090 40755cc4c42995b74fa03706bccfeb04 869 Gene3D G3DSA:3.40.1160.10 12 303 6.9E-71 T 17-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BJD13_02090 40755cc4c42995b74fa03706bccfeb04 869 PIRSF PIRSF036459 1 869 0.0 T 17-10-2018 IPR011246 Bifunctional diaminopimelate decarboxylase/aspartate kinase BJD13_02090 40755cc4c42995b74fa03706bccfeb04 869 Gene3D G3DSA:1.20.120.1320 52 141 6.9E-71 T 17-10-2018 BJD13_02090 40755cc4c42995b74fa03706bccfeb04 869 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 753 843 2.6E-21 T 17-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 BJD13_02090 40755cc4c42995b74fa03706bccfeb04 869 SUPERFAMILY SSF50621 732 865 1.21E-40 T 17-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 BJD13_02090 40755cc4c42995b74fa03706bccfeb04 869 Gene3D G3DSA:3.20.20.10 514 756 3.0E-96 T 17-10-2018 IPR029066 PLP-binding barrel BJD13_02090 40755cc4c42995b74fa03706bccfeb04 869 Pfam PF00696 Amino acid kinase family 10 291 1.5E-39 T 17-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 BJD13_02090 40755cc4c42995b74fa03706bccfeb04 869 Gene3D G3DSA:3.30.70.260 317 459 9.0E-35 T 17-10-2018 BJD13_02090 40755cc4c42995b74fa03706bccfeb04 869 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 664 677 1.1E-22 T 17-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BJD13_02090 40755cc4c42995b74fa03706bccfeb04 869 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 535 553 1.1E-22 T 17-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BJD13_02090 40755cc4c42995b74fa03706bccfeb04 869 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 843 856 1.1E-22 T 17-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BJD13_02090 40755cc4c42995b74fa03706bccfeb04 869 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 742 761 1.1E-22 T 17-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BJD13_02090 40755cc4c42995b74fa03706bccfeb04 869 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 555 567 1.1E-22 T 17-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BJD13_02090 40755cc4c42995b74fa03706bccfeb04 869 Gene3D G3DSA:3.30.70.260 323 395 9.0E-35 T 17-10-2018 BJD13_02090 40755cc4c42995b74fa03706bccfeb04 869 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 517 752 1.8E-41 T 17-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 BJD13_02090 40755cc4c42995b74fa03706bccfeb04 869 SUPERFAMILY SSF53633 9 305 4.89E-56 T 17-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BJD13_02090 40755cc4c42995b74fa03706bccfeb04 869 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 695 711 - T 17-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site BJD13_02090 40755cc4c42995b74fa03706bccfeb04 869 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 504 863 9.6E-91 T 17-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BJD13_02090 40755cc4c42995b74fa03706bccfeb04 869 PRINTS PR01181 Diaminopimelate decarboxylase signature 553 570 1.4E-13 T 17-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BJD13_02090 40755cc4c42995b74fa03706bccfeb04 869 PRINTS PR01181 Diaminopimelate decarboxylase signature 853 869 1.4E-13 T 17-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BJD13_02090 40755cc4c42995b74fa03706bccfeb04 869 PRINTS PR01181 Diaminopimelate decarboxylase signature 639 648 1.4E-13 T 17-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BJD13_02090 40755cc4c42995b74fa03706bccfeb04 869 PRINTS PR01181 Diaminopimelate decarboxylase signature 770 788 1.4E-13 T 17-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BJD13_02090 40755cc4c42995b74fa03706bccfeb04 869 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 535 553 - T 17-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site BJD13_02090 40755cc4c42995b74fa03706bccfeb04 869 ProSitePatterns PS00324 Aspartokinase signature. 12 20 - T 17-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BJD13_02090 40755cc4c42995b74fa03706bccfeb04 869 Gene3D G3DSA:2.40.37.10 504 864 3.0E-96 T 17-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 BJD13_02090 40755cc4c42995b74fa03706bccfeb04 869 SUPERFAMILY SSF55021 389 460 1.91E-9 T 17-10-2018 BJD13_02090 40755cc4c42995b74fa03706bccfeb04 869 SUPERFAMILY SSF55021 313 405 7.1E-12 T 17-10-2018 BJD13_02090 40755cc4c42995b74fa03706bccfeb04 869 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 10 460 2.0E-81 T 17-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BJD13_02090 40755cc4c42995b74fa03706bccfeb04 869 SUPERFAMILY SSF51419 506 754 2.62E-55 T 17-10-2018 IPR029066 PLP-binding barrel BJD13_06505 7f3c106be820b624999dea5681c1f319 494 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 466 486 5.5E-12 T 17-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD13_06505 7f3c106be820b624999dea5681c1f319 494 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 449 466 5.5E-12 T 17-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD13_06505 7f3c106be820b624999dea5681c1f319 494 Gene3D G3DSA:1.10.8.60 310 384 3.0E-24 T 17-10-2018 BJD13_06505 7f3c106be820b624999dea5681c1f319 494 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 350 359 - T 17-10-2018 IPR025944 Sigma-54 interaction domain, conserved site BJD13_06505 7f3c106be820b624999dea5681c1f319 494 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 162 175 - T 17-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BJD13_06505 7f3c106be820b624999dea5681c1f319 494 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 224 239 - T 17-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BJD13_06505 7f3c106be820b624999dea5681c1f319 494 Pfam PF06490 Flagellar regulatory protein FleQ 5 120 4.3E-20 T 17-10-2018 IPR010518 Flagellar regulatory FleQ BJD13_06505 7f3c106be820b624999dea5681c1f319 494 SMART SM00382 158 305 3.1E-12 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_06505 7f3c106be820b624999dea5681c1f319 494 SUPERFAMILY SSF46689 350 486 5.82E-12 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_06505 7f3c106be820b624999dea5681c1f319 494 SUPERFAMILY SSF52540 140 379 3.04E-72 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_06505 7f3c106be820b624999dea5681c1f319 494 Pfam PF02954 Bacterial regulatory protein, Fis family 444 483 1.4E-12 T 17-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD13_06505 7f3c106be820b624999dea5681c1f319 494 Pfam PF00158 Sigma-54 interaction domain 140 305 2.2E-71 T 17-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 BJD13_06505 7f3c106be820b624999dea5681c1f319 494 Gene3D G3DSA:3.40.50.300 125 309 9.7E-66 T 17-10-2018 BJD13_06505 7f3c106be820b624999dea5681c1f319 494 Gene3D G3DSA:1.10.10.60 412 489 2.1E-13 T 17-10-2018 BJD13_12940 eaa209864316b181a353f4530e15731b 682 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 17 680 39.971 T 17-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 BJD13_12940 eaa209864316b181a353f4530e15731b 682 SUPERFAMILY SSF81665 49 302 1.57E-7 T 17-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 BJD13_12940 eaa209864316b181a353f4530e15731b 682 SUPERFAMILY SSF56784 304 564 9.89E-38 T 17-10-2018 IPR036412 HAD-like superfamily BJD13_12940 eaa209864316b181a353f4530e15731b 682 Pfam PF00702 haloacid dehalogenase-like hydrolase 304 530 1.7E-33 T 17-10-2018 BJD13_12940 eaa209864316b181a353f4530e15731b 682 SUPERFAMILY SSF81653 116 210 1.7E-21 T 17-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 BJD13_12940 eaa209864316b181a353f4530e15731b 682 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 310 316 - T 17-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 BJD13_12940 eaa209864316b181a353f4530e15731b 682 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 373 605 8.2E-41 T 17-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 BJD13_12940 eaa209864316b181a353f4530e15731b 682 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 78 344 1.6E-32 T 17-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 BJD13_12940 eaa209864316b181a353f4530e15731b 682 Gene3D G3DSA:2.70.150.20 108 215 7.7E-26 T 17-10-2018 BJD13_12940 eaa209864316b181a353f4530e15731b 682 Pfam PF00122 E1-E2 ATPase 113 285 7.6E-34 T 17-10-2018 BJD13_12940 eaa209864316b181a353f4530e15731b 682 Gene3D G3DSA:3.40.1110.10 319 448 2.6E-44 T 17-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 BJD13_12940 eaa209864316b181a353f4530e15731b 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 539 551 2.1E-22 T 17-10-2018 BJD13_12940 eaa209864316b181a353f4530e15731b 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 463 473 2.1E-22 T 17-10-2018 BJD13_12940 eaa209864316b181a353f4530e15731b 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 516 535 2.1E-22 T 17-10-2018 BJD13_12940 eaa209864316b181a353f4530e15731b 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 157 171 2.1E-22 T 17-10-2018 BJD13_12940 eaa209864316b181a353f4530e15731b 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 308 322 2.1E-22 T 17-10-2018 BJD13_12940 eaa209864316b181a353f4530e15731b 682 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 14 676 8.7E-286 T 17-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 BJD13_11565 bf1d56e82dfa2993e072975fababd5ae 700 Gene3D G3DSA:3.30.870.10 523 700 1.3E-64 T 17-10-2018 BJD13_11565 bf1d56e82dfa2993e072975fababd5ae 700 Gene3D G3DSA:3.30.1840.10 22 334 4.1E-94 T 17-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 BJD13_11565 bf1d56e82dfa2993e072975fababd5ae 700 SUPERFAMILY SSF140356 24 126 3.92E-34 T 17-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 BJD13_11565 bf1d56e82dfa2993e072975fababd5ae 700 PIRSF PIRSF015589 7 700 2.5E-265 T 17-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 BJD13_11565 bf1d56e82dfa2993e072975fababd5ae 700 Pfam PF13090 Polyphosphate kinase C-terminal domain 349 696 1.4E-149 T 17-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 BJD13_11565 bf1d56e82dfa2993e072975fababd5ae 700 Pfam PF02503 Polyphosphate kinase middle domain 141 342 8.5E-59 T 17-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 BJD13_11565 bf1d56e82dfa2993e072975fababd5ae 700 SUPERFAMILY SSF143724 130 335 2.55E-59 T 17-10-2018 BJD13_11565 bf1d56e82dfa2993e072975fababd5ae 700 Pfam PF13089 Polyphosphate kinase N-terminal domain 27 131 2.4E-30 T 17-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 BJD13_11565 bf1d56e82dfa2993e072975fababd5ae 700 Gene3D G3DSA:3.30.870.10 337 520 3.0E-71 T 17-10-2018 BJD13_11565 bf1d56e82dfa2993e072975fababd5ae 700 SUPERFAMILY SSF56024 519 699 2.47E-69 T 17-10-2018 BJD13_11565 bf1d56e82dfa2993e072975fababd5ae 700 SUPERFAMILY SSF56024 335 511 2.83E-56 T 17-10-2018 BJD13_11565 bf1d56e82dfa2993e072975fababd5ae 700 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 27 698 1.6E-280 T 17-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 BJD13_11565 bf1d56e82dfa2993e072975fababd5ae 700 Hamap MF_00347 Polyphosphate kinase [ppk]. 24 699 27.787 T 17-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 BJD13_02620 fa9801825aca236961a52a60f6b33219 1019 Gene3D G3DSA:1.20.1640.10 502 1007 3.1E-236 T 17-10-2018 BJD13_02620 fa9801825aca236961a52a60f6b33219 1019 Gene3D G3DSA:3.30.70.1430 556 657 3.1E-236 T 17-10-2018 BJD13_02620 fa9801825aca236961a52a60f6b33219 1019 SUPERFAMILY SSF82714 183 266 2.09E-8 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_02620 fa9801825aca236961a52a60f6b33219 1019 Gene3D G3DSA:3.30.2090.10 709 798 3.1E-236 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_02620 fa9801825aca236961a52a60f6b33219 1019 SUPERFAMILY SSF82693 136 324 1.24E-15 T 17-10-2018 BJD13_02620 fa9801825aca236961a52a60f6b33219 1019 Gene3D G3DSA:1.20.1640.10 13 501 3.1E-236 T 17-10-2018 BJD13_02620 fa9801825aca236961a52a60f6b33219 1019 Pfam PF00873 AcrB/AcrD/AcrF family 6 1009 9.2E-155 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_02620 fa9801825aca236961a52a60f6b33219 1019 SUPERFAMILY SSF82866 796 1014 1.83E-47 T 17-10-2018 BJD13_02620 fa9801825aca236961a52a60f6b33219 1019 Gene3D G3DSA:3.30.70.1440 658 855 3.1E-236 T 17-10-2018 BJD13_02620 fa9801825aca236961a52a60f6b33219 1019 SUPERFAMILY SSF82866 294 493 2.09E-39 T 17-10-2018 BJD13_02620 fa9801825aca236961a52a60f6b33219 1019 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 3.3E-24 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_02620 fa9801825aca236961a52a60f6b33219 1019 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 3.3E-24 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_02620 fa9801825aca236961a52a60f6b33219 1019 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 3.3E-24 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_02620 fa9801825aca236961a52a60f6b33219 1019 PRINTS PR00702 Acriflavin resistance protein family signature 388 412 3.3E-24 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_02620 fa9801825aca236961a52a60f6b33219 1019 PRINTS PR00702 Acriflavin resistance protein family signature 466 489 3.3E-24 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_02620 fa9801825aca236961a52a60f6b33219 1019 PRINTS PR00702 Acriflavin resistance protein family signature 539 556 3.3E-24 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_02620 fa9801825aca236961a52a60f6b33219 1019 PRINTS PR00702 Acriflavin resistance protein family signature 441 464 3.3E-24 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_02620 fa9801825aca236961a52a60f6b33219 1019 Gene3D G3DSA:3.30.70.1320 134 328 3.1E-236 T 17-10-2018 BJD13_02620 fa9801825aca236961a52a60f6b33219 1019 SUPERFAMILY SSF82714 708 794 5.49E-12 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_02620 fa9801825aca236961a52a60f6b33219 1019 Gene3D G3DSA:3.30.70.1430 40 806 3.1E-236 T 17-10-2018 BJD13_02620 fa9801825aca236961a52a60f6b33219 1019 Gene3D G3DSA:3.30.2090.10 178 275 3.1E-236 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_02620 fa9801825aca236961a52a60f6b33219 1019 SUPERFAMILY SSF82693 42 131 1.46E-13 T 17-10-2018 BJD13_11090 a22cf354f88af7acd4e5b39ec0b5d43d 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 244 2.3E-65 T 17-10-2018 BJD13_11090 a22cf354f88af7acd4e5b39ec0b5d43d 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 4.1E-15 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_11090 a22cf354f88af7acd4e5b39ec0b5d43d 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 4.1E-15 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_11090 a22cf354f88af7acd4e5b39ec0b5d43d 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 4.1E-15 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_11090 a22cf354f88af7acd4e5b39ec0b5d43d 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 7.2E-48 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_11090 a22cf354f88af7acd4e5b39ec0b5d43d 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 7.2E-48 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_11090 a22cf354f88af7acd4e5b39ec0b5d43d 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 7.2E-48 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_11090 a22cf354f88af7acd4e5b39ec0b5d43d 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 7.2E-48 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_11090 a22cf354f88af7acd4e5b39ec0b5d43d 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 7.2E-48 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_11090 a22cf354f88af7acd4e5b39ec0b5d43d 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 7.2E-48 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_11090 a22cf354f88af7acd4e5b39ec0b5d43d 247 SUPERFAMILY SSF51735 6 246 3.95E-83 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_11090 a22cf354f88af7acd4e5b39ec0b5d43d 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 190 5.0E-5 T 17-10-2018 BJD13_11090 a22cf354f88af7acd4e5b39ec0b5d43d 247 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 10 245 5.9E-99 T 17-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BJD13_11090 a22cf354f88af7acd4e5b39ec0b5d43d 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 17-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BJD13_11090 a22cf354f88af7acd4e5b39ec0b5d43d 247 Gene3D G3DSA:3.40.50.720 2 247 2.8E-83 T 17-10-2018 BJD13_22440 1a8d2f0caf38e471ff3d2b294a41b290 400 Gene3D G3DSA:3.30.950.10 249 382 7.6E-46 T 17-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 BJD13_22440 1a8d2f0caf38e471ff3d2b294a41b290 400 Gene3D G3DSA:3.40.1010.10 132 248 1.2E-44 T 17-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 BJD13_22440 1a8d2f0caf38e471ff3d2b294a41b290 400 SUPERFAMILY SSF51735 5 104 2.05E-11 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_22440 1a8d2f0caf38e471ff3d2b294a41b290 400 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 135 344 2.8E-50 T 17-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 BJD13_22440 1a8d2f0caf38e471ff3d2b294a41b290 400 Pfam PF13241 Putative NAD(P)-binding 8 109 1.6E-8 T 17-10-2018 BJD13_22440 1a8d2f0caf38e471ff3d2b294a41b290 400 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 133 368 4.2E-90 T 17-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 BJD13_22440 1a8d2f0caf38e471ff3d2b294a41b290 400 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 5 104 6.2E-20 T 17-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 BJD13_22440 1a8d2f0caf38e471ff3d2b294a41b290 400 SUPERFAMILY SSF53790 131 377 1.57E-77 T 17-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 BJD13_22440 1a8d2f0caf38e471ff3d2b294a41b290 400 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 213 246 - T 17-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 BJD13_22440 1a8d2f0caf38e471ff3d2b294a41b290 400 PIRSF PIRSF036426 128 385 6.1E-123 T 17-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 BJD13_22440 1a8d2f0caf38e471ff3d2b294a41b290 400 PIRSF PIRSF036426 2 131 2.7E-26 T 17-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 BJD13_22440 1a8d2f0caf38e471ff3d2b294a41b290 400 Gene3D G3DSA:3.40.50.720 4 119 1.5E-17 T 17-10-2018 BJD13_18395 67817ca853673cadc0c20d7b72dc36bb 174 SUPERFAMILY SSF88659 97 170 2.4E-16 T 17-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BJD13_18395 67817ca853673cadc0c20d7b72dc36bb 174 Pfam PF04542 Sigma-70 region 2 12 78 1.7E-11 T 17-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BJD13_18395 67817ca853673cadc0c20d7b72dc36bb 174 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 8 167 1.3E-27 T 17-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BJD13_18395 67817ca853673cadc0c20d7b72dc36bb 174 Gene3D G3DSA:1.10.1740.10 1 79 5.0E-11 T 17-10-2018 BJD13_18395 67817ca853673cadc0c20d7b72dc36bb 174 Gene3D G3DSA:1.10.10.10 85 173 2.9E-17 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_18395 67817ca853673cadc0c20d7b72dc36bb 174 SUPERFAMILY SSF88946 5 92 5.89E-17 T 17-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BJD13_18395 67817ca853673cadc0c20d7b72dc36bb 174 Pfam PF08281 Sigma-70, region 4 111 163 2.7E-16 T 17-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BJD13_05830 32d9018e2151f1c01b9670e6a4c1284c 330 Gene3D G3DSA:1.10.760.10 64 198 7.4E-79 T 17-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BJD13_05830 32d9018e2151f1c01b9670e6a4c1284c 330 Pfam PF03150 Di-haem cytochrome c peroxidase 66 212 8.5E-31 T 17-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 BJD13_05830 32d9018e2151f1c01b9670e6a4c1284c 330 SUPERFAMILY SSF46626 51 200 9.3E-30 T 17-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BJD13_05830 32d9018e2151f1c01b9670e6a4c1284c 330 Gene3D G3DSA:1.10.760.10 199 319 7.4E-79 T 17-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BJD13_05830 32d9018e2151f1c01b9670e6a4c1284c 330 SUPERFAMILY SSF46626 199 320 1.1E-33 T 17-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BJD13_05830 32d9018e2151f1c01b9670e6a4c1284c 330 Pfam PF00034 Cytochrome c 221 316 1.5E-8 T 17-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_05830 32d9018e2151f1c01b9670e6a4c1284c 330 PIRSF PIRSF000294 22 328 1.0E-64 T 17-10-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 BJD13_10435 40e868045562078c4c271c0020578ba2 397 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 25 184 1.2E-25 T 17-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BJD13_10435 40e868045562078c4c271c0020578ba2 397 Gene3D G3DSA:1.10.10.10 108 187 1.0E-13 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_10435 40e868045562078c4c271c0020578ba2 397 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 50 81 - T 17-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BJD13_10435 40e868045562078c4c271c0020578ba2 397 SUPERFAMILY SSF88659 109 185 4.49E-12 T 17-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BJD13_10435 40e868045562078c4c271c0020578ba2 397 Gene3D G3DSA:1.10.1740.10 12 107 6.1E-19 T 17-10-2018 BJD13_10435 40e868045562078c4c271c0020578ba2 397 Pfam PF08281 Sigma-70, region 4 130 178 8.3E-11 T 17-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BJD13_10435 40e868045562078c4c271c0020578ba2 397 Pfam PF04542 Sigma-70 region 2 31 94 1.2E-12 T 17-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BJD13_10435 40e868045562078c4c271c0020578ba2 397 SUPERFAMILY SSF88946 17 97 7.59E-21 T 17-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BJD13_23700 08f3b726d86e019d87dfe3121b32c986 343 Pfam PF00561 alpha/beta hydrolase fold 59 324 6.3E-18 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD13_23700 08f3b726d86e019d87dfe3121b32c986 343 PIRSF PIRSF000443 1 343 9.3E-71 T 17-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 BJD13_23700 08f3b726d86e019d87dfe3121b32c986 343 Gene3D G3DSA:3.40.50.1820 39 341 2.3E-67 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_23700 08f3b726d86e019d87dfe3121b32c986 343 Hamap MF_00296 Homoserine O-acetyltransferase [metXA]. 17 337 20.078 T 17-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 BJD13_23700 08f3b726d86e019d87dfe3121b32c986 343 SUPERFAMILY SSF53474 44 332 4.38E-48 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_07645 cd0df390635a2fd960d0d952eaacf6a7 126 Pfam PF02261 Aspartate decarboxylase 1 114 1.5E-47 T 17-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 BJD13_07645 cd0df390635a2fd960d0d952eaacf6a7 126 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 122 3.0E-64 T 17-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 BJD13_07645 cd0df390635a2fd960d0d952eaacf6a7 126 SUPERFAMILY SSF50692 1 121 3.85E-46 T 17-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily BJD13_07645 cd0df390635a2fd960d0d952eaacf6a7 126 Gene3D G3DSA:2.40.40.20 1 126 1.7E-53 T 17-10-2018 BJD13_07645 cd0df390635a2fd960d0d952eaacf6a7 126 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 125 7.1E-49 T 17-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 BJD13_07645 cd0df390635a2fd960d0d952eaacf6a7 126 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 126 67.941 T 17-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 BJD13_07645 cd0df390635a2fd960d0d952eaacf6a7 126 PIRSF PIRSF006246 1 126 3.0E-48 T 17-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 BJD13_00310 13d416b3c4fd87763d3f6754d9d04af2 810 ProSitePatterns PS01047 Heavy-metal-associated domain. 20 49 - T 17-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 BJD13_00310 13d416b3c4fd87763d3f6754d9d04af2 810 SUPERFAMILY SSF81665 262 490 2.88E-16 T 17-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 BJD13_00310 13d416b3c4fd87763d3f6754d9d04af2 810 SUPERFAMILY SSF81653 299 396 6.02E-26 T 17-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 BJD13_00310 13d416b3c4fd87763d3f6754d9d04af2 810 Pfam PF00403 Heavy-metal-associated domain 17 76 7.3E-14 T 17-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 BJD13_00310 13d416b3c4fd87763d3f6754d9d04af2 810 Pfam PF00403 Heavy-metal-associated domain 85 142 5.7E-14 T 17-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 BJD13_00310 13d416b3c4fd87763d3f6754d9d04af2 810 ProSitePatterns PS01047 Heavy-metal-associated domain. 86 115 - T 17-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 BJD13_00310 13d416b3c4fd87763d3f6754d9d04af2 810 SUPERFAMILY SSF56784 494 794 1.05E-56 T 17-10-2018 IPR036412 HAD-like superfamily BJD13_00310 13d416b3c4fd87763d3f6754d9d04af2 810 Gene3D G3DSA:3.40.50.1000 477 747 2.8E-84 T 17-10-2018 IPR023214 HAD superfamily BJD13_00310 13d416b3c4fd87763d3f6754d9d04af2 810 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 346 360 1.9E-28 T 17-10-2018 BJD13_00310 13d416b3c4fd87763d3f6754d9d04af2 810 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 718 730 1.9E-28 T 17-10-2018 BJD13_00310 13d416b3c4fd87763d3f6754d9d04af2 810 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 621 632 1.9E-28 T 17-10-2018 BJD13_00310 13d416b3c4fd87763d3f6754d9d04af2 810 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 496 510 1.9E-28 T 17-10-2018 BJD13_00310 13d416b3c4fd87763d3f6754d9d04af2 810 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 643 653 1.9E-28 T 17-10-2018 BJD13_00310 13d416b3c4fd87763d3f6754d9d04af2 810 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 695 714 1.9E-28 T 17-10-2018 BJD13_00310 13d416b3c4fd87763d3f6754d9d04af2 810 Pfam PF00122 E1-E2 ATPase 297 475 2.1E-56 T 17-10-2018 BJD13_00310 13d416b3c4fd87763d3f6754d9d04af2 810 Gene3D G3DSA:2.70.150.20 290 401 2.7E-38 T 17-10-2018 BJD13_00310 13d416b3c4fd87763d3f6754d9d04af2 810 Gene3D G3DSA:3.40.1110.10 507 628 2.8E-84 T 17-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 BJD13_00310 13d416b3c4fd87763d3f6754d9d04af2 810 Gene3D G3DSA:3.30.70.100 81 146 3.2E-19 T 17-10-2018 BJD13_00310 13d416b3c4fd87763d3f6754d9d04af2 810 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 268 774 6.4E-88 T 17-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 BJD13_00310 13d416b3c4fd87763d3f6754d9d04af2 810 SUPERFAMILY SSF55008 81 146 1.07E-18 T 17-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 BJD13_00310 13d416b3c4fd87763d3f6754d9d04af2 810 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 498 504 - T 17-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 BJD13_00310 13d416b3c4fd87763d3f6754d9d04af2 810 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 83 143 3.5E-8 T 17-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 BJD13_00310 13d416b3c4fd87763d3f6754d9d04af2 810 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 17 78 7.7E-9 T 17-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 BJD13_00310 13d416b3c4fd87763d3f6754d9d04af2 810 PRINTS PR00943 Copper-transporting ATPase signature 479 494 1.5E-9 T 17-10-2018 BJD13_00310 13d416b3c4fd87763d3f6754d9d04af2 810 PRINTS PR00943 Copper-transporting ATPase signature 673 690 1.5E-9 T 17-10-2018 BJD13_00310 13d416b3c4fd87763d3f6754d9d04af2 810 PRINTS PR00943 Copper-transporting ATPase signature 286 304 1.5E-9 T 17-10-2018 BJD13_00310 13d416b3c4fd87763d3f6754d9d04af2 810 PRINTS PR00943 Copper-transporting ATPase signature 419 433 1.5E-9 T 17-10-2018 BJD13_00310 13d416b3c4fd87763d3f6754d9d04af2 810 PRINTS PR00943 Copper-transporting ATPase signature 215 234 1.5E-9 T 17-10-2018 BJD13_00310 13d416b3c4fd87763d3f6754d9d04af2 810 PRINTS PR00943 Copper-transporting ATPase signature 266 285 1.5E-9 T 17-10-2018 BJD13_00310 13d416b3c4fd87763d3f6754d9d04af2 810 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 230 797 1.6E-183 T 17-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 BJD13_00310 13d416b3c4fd87763d3f6754d9d04af2 810 Gene3D G3DSA:3.30.70.100 13 80 5.9E-18 T 17-10-2018 BJD13_00310 13d416b3c4fd87763d3f6754d9d04af2 810 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 211 798 2.7E-174 T 17-10-2018 BJD13_00310 13d416b3c4fd87763d3f6754d9d04af2 810 SUPERFAMILY SSF55008 15 78 8.51E-17 T 17-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 BJD13_00310 13d416b3c4fd87763d3f6754d9d04af2 810 Pfam PF00702 haloacid dehalogenase-like hydrolase 492 709 1.2E-43 T 17-10-2018 BJD13_05595 16b4899e7da0ad7960d50df85246b3c5 196 SUPERFAMILY SSF53335 24 193 6.6E-31 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_05595 16b4899e7da0ad7960d50df85246b3c5 196 Gene3D G3DSA:3.40.50.150 4 195 1.7E-44 T 17-10-2018 BJD13_05595 16b4899e7da0ad7960d50df85246b3c5 196 Pfam PF01596 O-methyltransferase 27 160 4.1E-22 T 17-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 BJD13_08430 1e7bb0b50a77cfd3945219cceed6119b 900 SMART SM00434 11 498 1.2E-277 T 17-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BJD13_08430 1e7bb0b50a77cfd3945219cceed6119b 900 SUPERFAMILY SSF101904 532 881 2.22E-104 T 17-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal BJD13_08430 1e7bb0b50a77cfd3945219cceed6119b 900 Gene3D G3DSA:3.30.1360.40 236 332 2.8E-225 T 17-10-2018 BJD13_08430 1e7bb0b50a77cfd3945219cceed6119b 900 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 875 24.07 T 17-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BJD13_08430 1e7bb0b50a77cfd3945219cceed6119b 900 SUPERFAMILY SSF56719 30 520 3.14E-177 T 17-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 BJD13_08430 1e7bb0b50a77cfd3945219cceed6119b 900 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 873 0.0 T 17-10-2018 BJD13_08430 1e7bb0b50a77cfd3945219cceed6119b 900 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 587 636 1.2E-10 T 17-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BJD13_08430 1e7bb0b50a77cfd3945219cceed6119b 900 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 644 687 1.0E-10 T 17-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BJD13_08430 1e7bb0b50a77cfd3945219cceed6119b 900 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 737 6.2E-13 T 17-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BJD13_08430 1e7bb0b50a77cfd3945219cceed6119b 900 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 827 873 1.2E-11 T 17-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BJD13_08430 1e7bb0b50a77cfd3945219cceed6119b 900 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 537 579 6.9E-10 T 17-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BJD13_08430 1e7bb0b50a77cfd3945219cceed6119b 900 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 777 822 2.1E-16 T 17-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BJD13_08430 1e7bb0b50a77cfd3945219cceed6119b 900 Gene3D G3DSA:3.90.199.10 33 520 2.8E-225 T 17-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 BJD13_08430 1e7bb0b50a77cfd3945219cceed6119b 900 Gene3D G3DSA:1.10.268.10 369 492 2.8E-225 T 17-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 BJD13_08430 1e7bb0b50a77cfd3945219cceed6119b 900 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 505 5.2E-154 T 17-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BJD13_07665 843a959c25aecc900ee4fd4c1a1ffa29 455 SUPERFAMILY SSF81891 183 416 1.31E-45 T 17-10-2018 BJD13_07665 843a959c25aecc900ee4fd4c1a1ffa29 455 Gene3D G3DSA:1.10.3090.10 181 428 1.0E-81 T 17-10-2018 BJD13_07665 843a959c25aecc900ee4fd4c1a1ffa29 455 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 210 272 2.7E-19 T 17-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 BJD13_07665 843a959c25aecc900ee4fd4c1a1ffa29 455 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 25 451 9.1E-152 T 17-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 BJD13_07665 843a959c25aecc900ee4fd4c1a1ffa29 455 Pfam PF12626 Polymerase A arginine-rich C-terminus 326 448 2.2E-33 T 17-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain BJD13_07665 843a959c25aecc900ee4fd4c1a1ffa29 455 Gene3D G3DSA:3.30.460.10 22 179 1.5E-58 T 17-10-2018 BJD13_07665 843a959c25aecc900ee4fd4c1a1ffa29 455 SUPERFAMILY SSF81301 27 180 7.74E-39 T 17-10-2018 BJD13_07665 843a959c25aecc900ee4fd4c1a1ffa29 455 Pfam PF01743 Poly A polymerase head domain 56 182 1.6E-34 T 17-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 BJD13_07665 843a959c25aecc900ee4fd4c1a1ffa29 455 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 12 448 38.045 T 17-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 BJD13_16970 baa4b2b30124d921f30c82c4bfae778d 814 Gene3D G3DSA:3.30.230.10 231 402 1.7E-71 T 17-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BJD13_16970 baa4b2b30124d921f30c82c4bfae778d 814 PRINTS PR00418 DNA topoisomerase II family signature 515 532 3.2E-70 T 17-10-2018 BJD13_16970 baa4b2b30124d921f30c82c4bfae778d 814 PRINTS PR00418 DNA topoisomerase II family signature 535 547 3.2E-70 T 17-10-2018 BJD13_16970 baa4b2b30124d921f30c82c4bfae778d 814 PRINTS PR00418 DNA topoisomerase II family signature 430 444 3.2E-70 T 17-10-2018 BJD13_16970 baa4b2b30124d921f30c82c4bfae778d 814 PRINTS PR00418 DNA topoisomerase II family signature 80 93 3.2E-70 T 17-10-2018 BJD13_16970 baa4b2b30124d921f30c82c4bfae778d 814 PRINTS PR00418 DNA topoisomerase II family signature 123 137 3.2E-70 T 17-10-2018 BJD13_16970 baa4b2b30124d921f30c82c4bfae778d 814 PRINTS PR00418 DNA topoisomerase II family signature 278 291 3.2E-70 T 17-10-2018 BJD13_16970 baa4b2b30124d921f30c82c4bfae778d 814 PRINTS PR00418 DNA topoisomerase II family signature 45 60 3.2E-70 T 17-10-2018 BJD13_16970 baa4b2b30124d921f30c82c4bfae778d 814 PRINTS PR00418 DNA topoisomerase II family signature 746 762 3.2E-70 T 17-10-2018 BJD13_16970 baa4b2b30124d921f30c82c4bfae778d 814 PRINTS PR00418 DNA topoisomerase II family signature 497 513 3.2E-70 T 17-10-2018 BJD13_16970 baa4b2b30124d921f30c82c4bfae778d 814 SUPERFAMILY SSF56719 404 805 4.97E-83 T 17-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 BJD13_16970 baa4b2b30124d921f30c82c4bfae778d 814 Gene3D G3DSA:3.30.565.10 12 230 1.5E-87 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_16970 baa4b2b30124d921f30c82c4bfae778d 814 SMART SM00433 45 807 1.1E-254 T 17-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BJD13_16970 baa4b2b30124d921f30c82c4bfae778d 814 SMART SM00387 41 185 3.0E-26 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_16970 baa4b2b30124d921f30c82c4bfae778d 814 Gene3D G3DSA:3.40.50.670 408 577 2.7E-70 T 17-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BJD13_16970 baa4b2b30124d921f30c82c4bfae778d 814 ProSitePatterns PS00177 DNA topoisomerase II signature. 432 440 - T 17-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BJD13_16970 baa4b2b30124d921f30c82c4bfae778d 814 Pfam PF01751 Toprim domain 429 534 3.0E-17 T 17-10-2018 IPR006171 TOPRIM domain BJD13_16970 baa4b2b30124d921f30c82c4bfae778d 814 PRINTS PR01159 DNA gyrase subunit B signature 230 252 1.7E-73 T 17-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BJD13_16970 baa4b2b30124d921f30c82c4bfae778d 814 PRINTS PR01159 DNA gyrase subunit B signature 370 384 1.7E-73 T 17-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BJD13_16970 baa4b2b30124d921f30c82c4bfae778d 814 PRINTS PR01159 DNA gyrase subunit B signature 205 218 1.7E-73 T 17-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BJD13_16970 baa4b2b30124d921f30c82c4bfae778d 814 PRINTS PR01159 DNA gyrase subunit B signature 480 489 1.7E-73 T 17-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BJD13_16970 baa4b2b30124d921f30c82c4bfae778d 814 PRINTS PR01159 DNA gyrase subunit B signature 767 779 1.7E-73 T 17-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BJD13_16970 baa4b2b30124d921f30c82c4bfae778d 814 PRINTS PR01159 DNA gyrase subunit B signature 384 404 1.7E-73 T 17-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BJD13_16970 baa4b2b30124d921f30c82c4bfae778d 814 PRINTS PR01159 DNA gyrase subunit B signature 190 205 1.7E-73 T 17-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BJD13_16970 baa4b2b30124d921f30c82c4bfae778d 814 PRINTS PR01159 DNA gyrase subunit B signature 15 25 1.7E-73 T 17-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BJD13_16970 baa4b2b30124d921f30c82c4bfae778d 814 PRINTS PR01159 DNA gyrase subunit B signature 783 799 1.7E-73 T 17-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BJD13_16970 baa4b2b30124d921f30c82c4bfae778d 814 PRINTS PR01159 DNA gyrase subunit B signature 322 338 1.7E-73 T 17-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BJD13_16970 baa4b2b30124d921f30c82c4bfae778d 814 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 15 814 2.8E-296 T 17-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BJD13_16970 baa4b2b30124d921f30c82c4bfae778d 814 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 742 803 2.0E-29 T 17-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 BJD13_16970 baa4b2b30124d921f30c82c4bfae778d 814 SUPERFAMILY SSF55874 15 220 2.6E-69 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_16970 baa4b2b30124d921f30c82c4bfae778d 814 Pfam PF00204 DNA gyrase B 231 400 1.0E-57 T 17-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BJD13_16970 baa4b2b30124d921f30c82c4bfae778d 814 Gene3D G3DSA:3.40.50.670 705 812 4.5E-25 T 17-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BJD13_16970 baa4b2b30124d921f30c82c4bfae778d 814 SUPERFAMILY SSF54211 231 401 2.28E-56 T 17-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BJD13_16970 baa4b2b30124d921f30c82c4bfae778d 814 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 12 814 97.628 T 17-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BJD13_16970 baa4b2b30124d921f30c82c4bfae778d 814 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 42 182 4.3E-20 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_23555 641c932ec27d74d6501fa70f133399e9 890 Pfam PF07715 TonB-dependent Receptor Plug Domain 62 173 1.4E-13 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_23555 641c932ec27d74d6501fa70f133399e9 890 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 42 890 1.9E-234 T 17-10-2018 IPR010104 Bacterial TonB-dependent receptor BJD13_23555 641c932ec27d74d6501fa70f133399e9 890 Pfam PF00593 TonB dependent receptor 418 889 9.6E-43 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_23555 641c932ec27d74d6501fa70f133399e9 890 Gene3D G3DSA:2.170.130.10 34 178 8.1E-15 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_23555 641c932ec27d74d6501fa70f133399e9 890 SUPERFAMILY SSF56935 31 890 7.02E-98 T 17-10-2018 BJD13_19605 9d895c046c16b5419f58da3ecabe410b 723 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 372 604 1.0E-51 T 17-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 BJD13_19605 9d895c046c16b5419f58da3ecabe410b 723 Pfam PF14310 Fibronectin type III-like domain 641 709 2.1E-19 T 17-10-2018 IPR026891 Fibronectin type III-like domain BJD13_19605 9d895c046c16b5419f58da3ecabe410b 723 SMART SM01217 641 710 3.4E-30 T 17-10-2018 IPR026891 Fibronectin type III-like domain BJD13_19605 9d895c046c16b5419f58da3ecabe410b 723 Gene3D G3DSA:3.40.50.1700 358 606 1.4E-76 T 17-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 BJD13_19605 9d895c046c16b5419f58da3ecabe410b 723 SUPERFAMILY SSF52279 372 607 1.96E-51 T 17-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 BJD13_19605 9d895c046c16b5419f58da3ecabe410b 723 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 14 332 1.2E-69 T 17-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BJD13_19605 9d895c046c16b5419f58da3ecabe410b 723 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 253 270 - T 17-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 BJD13_19605 9d895c046c16b5419f58da3ecabe410b 723 SUPERFAMILY SSF51445 3 371 7.58E-99 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily BJD13_19605 9d895c046c16b5419f58da3ecabe410b 723 PRINTS PR00133 Glycosyl hydrolase family 3 signature 253 271 2.8E-18 T 17-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BJD13_19605 9d895c046c16b5419f58da3ecabe410b 723 PRINTS PR00133 Glycosyl hydrolase family 3 signature 81 97 2.8E-18 T 17-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BJD13_19605 9d895c046c16b5419f58da3ecabe410b 723 PRINTS PR00133 Glycosyl hydrolase family 3 signature 100 119 2.8E-18 T 17-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BJD13_19605 9d895c046c16b5419f58da3ecabe410b 723 PRINTS PR00133 Glycosyl hydrolase family 3 signature 146 162 2.8E-18 T 17-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BJD13_19605 9d895c046c16b5419f58da3ecabe410b 723 PRINTS PR00133 Glycosyl hydrolase family 3 signature 183 199 2.8E-18 T 17-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BJD13_19605 9d895c046c16b5419f58da3ecabe410b 723 Gene3D G3DSA:3.20.20.300 2 354 4.0E-116 T 17-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 BJD13_19605 9d895c046c16b5419f58da3ecabe410b 723 Gene3D G3DSA:2.60.40.10 607 719 1.9E-32 T 17-10-2018 IPR013783 Immunoglobulin-like fold BJD13_22755 52d058c18788fac61d1f5cfa37cce9ae 389 Pfam PF08442 ATP-grasp domain 2 202 9.8E-73 T 17-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BJD13_22755 52d058c18788fac61d1f5cfa37cce9ae 389 Gene3D G3DSA:3.30.470.20 1 234 1.7E-88 T 17-10-2018 BJD13_22755 52d058c18788fac61d1f5cfa37cce9ae 389 Pfam PF00549 CoA-ligase 262 382 4.3E-26 T 17-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BJD13_22755 52d058c18788fac61d1f5cfa37cce9ae 389 PIRSF PIRSF001554 1 388 3.3E-148 T 17-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BJD13_22755 52d058c18788fac61d1f5cfa37cce9ae 389 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 17-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BJD13_22755 52d058c18788fac61d1f5cfa37cce9ae 389 Gene3D G3DSA:3.30.1490.20 21 104 1.7E-88 T 17-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BJD13_22755 52d058c18788fac61d1f5cfa37cce9ae 389 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 4.8E-157 T 17-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BJD13_22755 52d058c18788fac61d1f5cfa37cce9ae 389 SUPERFAMILY SSF52210 239 385 3.4E-53 T 17-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BJD13_22755 52d058c18788fac61d1f5cfa37cce9ae 389 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 41.81 T 17-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BJD13_22755 52d058c18788fac61d1f5cfa37cce9ae 389 Gene3D G3DSA:3.40.50.261 240 388 1.3E-56 T 17-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BJD13_22755 52d058c18788fac61d1f5cfa37cce9ae 389 SUPERFAMILY SSF56059 1 238 1.56E-75 T 17-10-2018 BJD13_19400 8f253e80e79bd99fb68ec8d5dd3030b9 781 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 324 452 2.8E-35 T 17-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD13_19400 8f253e80e79bd99fb68ec8d5dd3030b9 781 Gene3D G3DSA:3.40.120.10 565 683 1.1E-41 T 17-10-2018 BJD13_19400 8f253e80e79bd99fb68ec8d5dd3030b9 781 Gene3D G3DSA:3.30.310.50 684 781 1.4E-22 T 17-10-2018 BJD13_19400 8f253e80e79bd99fb68ec8d5dd3030b9 781 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 573 682 1.1E-23 T 17-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD13_19400 8f253e80e79bd99fb68ec8d5dd3030b9 781 Gene3D G3DSA:3.40.120.10 487 564 7.0E-33 T 17-10-2018 BJD13_19400 8f253e80e79bd99fb68ec8d5dd3030b9 781 SUPERFAMILY SSF53738 470 569 5.1E-32 T 17-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD13_19400 8f253e80e79bd99fb68ec8d5dd3030b9 781 SUPERFAMILY SSF55957 683 778 7.5E-19 T 17-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD13_19400 8f253e80e79bd99fb68ec8d5dd3030b9 781 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 412 426 5.0E-23 T 17-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD13_19400 8f253e80e79bd99fb68ec8d5dd3030b9 781 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 519 532 5.0E-23 T 17-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD13_19400 8f253e80e79bd99fb68ec8d5dd3030b9 781 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 485 504 5.0E-23 T 17-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD13_19400 8f253e80e79bd99fb68ec8d5dd3030b9 781 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 548 563 5.0E-23 T 17-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD13_19400 8f253e80e79bd99fb68ec8d5dd3030b9 781 SUPERFAMILY SSF53738 315 492 1.18E-37 T 17-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD13_19400 8f253e80e79bd99fb68ec8d5dd3030b9 781 SUPERFAMILY SSF53738 573 679 2.79E-33 T 17-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD13_19400 8f253e80e79bd99fb68ec8d5dd3030b9 781 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 470 568 1.6E-28 T 17-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD13_19400 8f253e80e79bd99fb68ec8d5dd3030b9 781 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 688 769 2.7E-13 T 17-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD13_19400 8f253e80e79bd99fb68ec8d5dd3030b9 781 Gene3D G3DSA:3.40.120.10 315 467 3.7E-49 T 17-10-2018 BJD13_14300 8ac4fe4273eb4cbe95a8f8ebb5e35279 445 Pfam PF00782 Dual specificity phosphatase, catalytic domain 339 424 3.3E-8 T 17-10-2018 IPR000340 Dual specificity phosphatase, catalytic domain GO:0008138|GO:0016311 BJD13_14300 8ac4fe4273eb4cbe95a8f8ebb5e35279 445 SUPERFAMILY SSF52799 295 419 6.12E-15 T 17-10-2018 IPR029021 Protein-tyrosine phosphatase-like BJD13_14300 8ac4fe4273eb4cbe95a8f8ebb5e35279 445 Gene3D G3DSA:3.90.190.10 303 430 3.1E-13 T 17-10-2018 IPR029021 Protein-tyrosine phosphatase-like BJD13_14300 8ac4fe4273eb4cbe95a8f8ebb5e35279 445 SMART SM00195 301 425 0.0065 T 17-10-2018 IPR020422 Dual specificity protein phosphatase domain GO:0006470|GO:0008138 BJD13_14300 8ac4fe4273eb4cbe95a8f8ebb5e35279 445 Pfam PF14378 PAP2 superfamily 66 195 2.2E-6 T 17-10-2018 IPR026841 Inositolphosphotransferase Aur1/Ipt1 BJD13_09690 08e336be0edcc79a8d3b345a2e9f763a 416 SUPERFAMILY SSF51905 5 411 2.36E-51 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_09690 08e336be0edcc79a8d3b345a2e9f763a 416 Pfam PF01593 Flavin containing amine oxidoreductase 13 266 3.9E-17 T 17-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 BJD13_09690 08e336be0edcc79a8d3b345a2e9f763a 416 Gene3D G3DSA:3.90.660.20 35 294 1.4E-24 T 17-10-2018 BJD13_09690 08e336be0edcc79a8d3b345a2e9f763a 416 Gene3D G3DSA:1.10.3110.10 103 197 1.4E-24 T 17-10-2018 BJD13_09690 08e336be0edcc79a8d3b345a2e9f763a 416 Gene3D G3DSA:3.50.50.60 7 285 1.4E-24 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_21925 17281736dfd2ba9cf85875309c3dda02 779 SUPERFAMILY SSF82171 219 540 2.75E-36 T 17-10-2018 BJD13_21925 17281736dfd2ba9cf85875309c3dda02 779 SUPERFAMILY SSF46894 2 103 1.08E-16 T 17-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BJD13_21925 17281736dfd2ba9cf85875309c3dda02 779 Gene3D G3DSA:2.120.10.30 462 692 8.5E-15 T 17-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like BJD13_21925 17281736dfd2ba9cf85875309c3dda02 779 Gene3D G3DSA:2.120.10.30 230 461 5.0E-35 T 17-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like BJD13_21925 17281736dfd2ba9cf85875309c3dda02 779 Gene3D G3DSA:1.10.10.10 3 112 7.8E-22 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_21925 17281736dfd2ba9cf85875309c3dda02 779 Pfam PF00486 Transcriptional regulatory protein, C terminal 27 102 3.8E-17 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD13_21925 17281736dfd2ba9cf85875309c3dda02 779 SUPERFAMILY SSF50969 493 753 3.84E-10 T 17-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like BJD13_21925 17281736dfd2ba9cf85875309c3dda02 779 SMART SM00862 26 102 1.0E-15 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD13_21925 17281736dfd2ba9cf85875309c3dda02 779 Pfam PF07676 WD40-like Beta Propeller Repeat 269 300 6.1E-6 T 17-10-2018 IPR011659 WD40-like Beta Propeller BJD13_21925 17281736dfd2ba9cf85875309c3dda02 779 Pfam PF07676 WD40-like Beta Propeller Repeat 372 393 1.3E-4 T 17-10-2018 IPR011659 WD40-like Beta Propeller BJD13_21925 17281736dfd2ba9cf85875309c3dda02 779 Pfam PF07676 WD40-like Beta Propeller Repeat 493 528 2.5E-7 T 17-10-2018 IPR011659 WD40-like Beta Propeller BJD13_21925 17281736dfd2ba9cf85875309c3dda02 779 Pfam PF07676 WD40-like Beta Propeller Repeat 221 244 0.048 T 17-10-2018 IPR011659 WD40-like Beta Propeller BJD13_21925 17281736dfd2ba9cf85875309c3dda02 779 Pfam PF07676 WD40-like Beta Propeller Repeat 324 337 0.16 T 17-10-2018 IPR011659 WD40-like Beta Propeller BJD13_06995 5bb7e34bf0793445d2fdb25d4d725735 505 SUPERFAMILY SSF55681 162 502 2.21E-117 T 17-10-2018 BJD13_06995 5bb7e34bf0793445d2fdb25d4d725735 505 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 15 504 4.1E-198 T 17-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BJD13_06995 5bb7e34bf0793445d2fdb25d4d725735 505 Pfam PF01336 OB-fold nucleic acid binding domain 70 145 5.9E-14 T 17-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 BJD13_06995 5bb7e34bf0793445d2fdb25d4d725735 505 Gene3D G3DSA:3.30.930.10 155 499 2.9E-131 T 17-10-2018 BJD13_06995 5bb7e34bf0793445d2fdb25d4d725735 505 Pfam PF00152 tRNA synthetases class II (D, K and N) 163 501 1.0E-81 T 17-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD13_06995 5bb7e34bf0793445d2fdb25d4d725735 505 Gene3D G3DSA:2.40.50.140 14 154 1.9E-36 T 17-10-2018 BJD13_06995 5bb7e34bf0793445d2fdb25d4d725735 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 262 279 2.8E-39 T 17-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BJD13_06995 5bb7e34bf0793445d2fdb25d4d725735 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 386 402 2.8E-39 T 17-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BJD13_06995 5bb7e34bf0793445d2fdb25d4d725735 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 244 257 2.8E-39 T 17-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BJD13_06995 5bb7e34bf0793445d2fdb25d4d725735 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 199 209 2.8E-39 T 17-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BJD13_06995 5bb7e34bf0793445d2fdb25d4d725735 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 215 231 2.8E-39 T 17-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BJD13_06995 5bb7e34bf0793445d2fdb25d4d725735 505 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 20 504 43.695 T 17-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BJD13_06995 5bb7e34bf0793445d2fdb25d4d725735 505 SUPERFAMILY SSF50249 13 155 1.01E-37 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD13_19710 d2e82f099a6df4de800e17605d2bf0d5 1082 Gene3D G3DSA:3.30.70.1320 133 324 3.5E-206 T 17-10-2018 BJD13_19710 d2e82f099a6df4de800e17605d2bf0d5 1082 SUPERFAMILY SSF82714 181 265 6.02E-16 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_19710 d2e82f099a6df4de800e17605d2bf0d5 1082 Gene3D G3DSA:3.30.2090.10 814 833 2.9E-73 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_19710 d2e82f099a6df4de800e17605d2bf0d5 1082 Gene3D G3DSA:3.30.2090.10 708 781 3.5E-206 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_19710 d2e82f099a6df4de800e17605d2bf0d5 1082 Gene3D G3DSA:3.30.70.1430 561 655 3.5E-206 T 17-10-2018 BJD13_19710 d2e82f099a6df4de800e17605d2bf0d5 1082 Gene3D G3DSA:3.30.70.1430 40 132 3.5E-206 T 17-10-2018 BJD13_19710 d2e82f099a6df4de800e17605d2bf0d5 1082 Gene3D G3DSA:1.20.1640.10 507 560 3.5E-206 T 17-10-2018 BJD13_19710 d2e82f099a6df4de800e17605d2bf0d5 1082 Gene3D G3DSA:1.20.1640.10 892 1048 2.9E-73 T 17-10-2018 BJD13_19710 d2e82f099a6df4de800e17605d2bf0d5 1082 Pfam PF00873 AcrB/AcrD/AcrF family 4 1051 1.2E-297 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_19710 d2e82f099a6df4de800e17605d2bf0d5 1082 PRINTS PR00702 Acriflavin resistance protein family signature 546 563 7.7E-73 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_19710 d2e82f099a6df4de800e17605d2bf0d5 1082 PRINTS PR00702 Acriflavin resistance protein family signature 328 351 7.7E-73 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_19710 d2e82f099a6df4de800e17605d2bf0d5 1082 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 7.7E-73 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_19710 d2e82f099a6df4de800e17605d2bf0d5 1082 PRINTS PR00702 Acriflavin resistance protein family signature 436 459 7.7E-73 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_19710 d2e82f099a6df4de800e17605d2bf0d5 1082 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 7.7E-73 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_19710 d2e82f099a6df4de800e17605d2bf0d5 1082 PRINTS PR00702 Acriflavin resistance protein family signature 355 376 7.7E-73 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_19710 d2e82f099a6df4de800e17605d2bf0d5 1082 PRINTS PR00702 Acriflavin resistance protein family signature 613 627 7.7E-73 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_19710 d2e82f099a6df4de800e17605d2bf0d5 1082 PRINTS PR00702 Acriflavin resistance protein family signature 383 407 7.7E-73 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_19710 d2e82f099a6df4de800e17605d2bf0d5 1082 PRINTS PR00702 Acriflavin resistance protein family signature 461 484 7.7E-73 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_19710 d2e82f099a6df4de800e17605d2bf0d5 1082 SUPERFAMILY SSF82693 136 322 1.83E-22 T 17-10-2018 BJD13_19710 d2e82f099a6df4de800e17605d2bf0d5 1082 SUPERFAMILY SSF82866 288 489 1.96E-49 T 17-10-2018 BJD13_19710 d2e82f099a6df4de800e17605d2bf0d5 1082 SUPERFAMILY SSF82714 710 780 2.62E-10 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_19710 d2e82f099a6df4de800e17605d2bf0d5 1082 SUPERFAMILY SSF82693 40 131 8.02E-21 T 17-10-2018 BJD13_19710 d2e82f099a6df4de800e17605d2bf0d5 1082 SUPERFAMILY SSF82693 559 655 3.14E-12 T 17-10-2018 BJD13_19710 d2e82f099a6df4de800e17605d2bf0d5 1082 Gene3D G3DSA:3.30.2090.10 177 267 3.5E-206 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_19710 d2e82f099a6df4de800e17605d2bf0d5 1082 Gene3D G3DSA:1.20.1640.10 10 506 3.5E-206 T 17-10-2018 BJD13_19710 d2e82f099a6df4de800e17605d2bf0d5 1082 SUPERFAMILY SSF82866 831 1054 6.28E-45 T 17-10-2018 BJD13_19710 d2e82f099a6df4de800e17605d2bf0d5 1082 Gene3D G3DSA:3.30.70.1440 842 891 2.9E-73 T 17-10-2018 BJD13_19710 d2e82f099a6df4de800e17605d2bf0d5 1082 Gene3D G3DSA:3.30.70.1440 656 707 3.5E-206 T 17-10-2018 BJD13_19585 4624908fa427b2f0247aa3d79fb9cd90 148 SUPERFAMILY SSF89095 1 146 4.08E-43 T 17-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 BJD13_19585 4624908fa427b2f0247aa3d79fb9cd90 148 Pfam PF09424 Yqey-like protein 4 146 3.8E-54 T 17-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 BJD13_19585 4624908fa427b2f0247aa3d79fb9cd90 148 Gene3D G3DSA:1.10.10.410 91 147 1.3E-19 T 17-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal BJD13_19585 4624908fa427b2f0247aa3d79fb9cd90 148 Gene3D G3DSA:1.10.1510.10 1 90 1.4E-28 T 17-10-2018 BJD13_06695 beb144f4f3f88c90824748c56074a6a1 552 Gene3D G3DSA:2.40.50.180 442 503 1.3E-33 T 17-10-2018 BJD13_06695 beb144f4f3f88c90824748c56074a6a1 552 Pfam PF01584 CheW-like domain 425 547 3.0E-26 T 17-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BJD13_06695 beb144f4f3f88c90824748c56074a6a1 552 SUPERFAMILY SSF55874 234 417 4.45E-40 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_06695 beb144f4f3f88c90824748c56074a6a1 552 Gene3D G3DSA:1.10.287.560 171 231 2.6E-17 T 17-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 BJD13_06695 beb144f4f3f88c90824748c56074a6a1 552 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 279 418 1.5E-18 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_06695 beb144f4f3f88c90824748c56074a6a1 552 SUPERFAMILY SSF50341 418 547 3.92E-31 T 17-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 BJD13_06695 beb144f4f3f88c90824748c56074a6a1 552 SMART SM01231 171 231 2.8E-16 T 17-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 BJD13_06695 beb144f4f3f88c90824748c56074a6a1 552 SMART SM00260 411 548 5.3E-30 T 17-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BJD13_06695 beb144f4f3f88c90824748c56074a6a1 552 Gene3D G3DSA:3.30.565.10 232 418 1.2E-57 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_06695 beb144f4f3f88c90824748c56074a6a1 552 SUPERFAMILY SSF47226 7 123 1.22E-27 T 17-10-2018 IPR036641 HPT domain superfamily GO:0000160 BJD13_06695 beb144f4f3f88c90824748c56074a6a1 552 PRINTS PR00344 Bacterial sensor protein C-terminal signature 379 397 4.9E-14 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_06695 beb144f4f3f88c90824748c56074a6a1 552 PRINTS PR00344 Bacterial sensor protein C-terminal signature 363 373 4.9E-14 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_06695 beb144f4f3f88c90824748c56074a6a1 552 PRINTS PR00344 Bacterial sensor protein C-terminal signature 321 335 4.9E-14 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_06695 beb144f4f3f88c90824748c56074a6a1 552 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 416 4.9E-14 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_06695 beb144f4f3f88c90824748c56074a6a1 552 Gene3D G3DSA:2.30.30.40 419 544 1.3E-33 T 17-10-2018 BJD13_06695 beb144f4f3f88c90824748c56074a6a1 552 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 172 230 1.1E-11 T 17-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 BJD13_06695 beb144f4f3f88c90824748c56074a6a1 552 SMART SM00387 276 419 7.9E-26 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_06695 beb144f4f3f88c90824748c56074a6a1 552 SMART SM00073 5 102 7.1E-16 T 17-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BJD13_06695 beb144f4f3f88c90824748c56074a6a1 552 SUPERFAMILY SSF47384 172 232 4.32E-13 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD13_06695 beb144f4f3f88c90824748c56074a6a1 552 Gene3D G3DSA:1.20.120.160 5 142 2.8E-31 T 17-10-2018 IPR036641 HPT domain superfamily GO:0000160 BJD13_06695 beb144f4f3f88c90824748c56074a6a1 552 Pfam PF01627 Hpt domain 9 103 1.2E-15 T 17-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BJD13_21795 4077fd4d0e4e8224de91e5ec082506d5 769 Gene3D G3DSA:3.40.50.10750 571 724 7.9E-86 T 17-10-2018 BJD13_21795 4077fd4d0e4e8224de91e5ec082506d5 769 SMART SM01274 19 152 8.8E-75 T 17-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 BJD13_21795 4077fd4d0e4e8224de91e5ec082506d5 769 SUPERFAMILY SSF53659 428 751 5.35E-86 T 17-10-2018 BJD13_21795 4077fd4d0e4e8224de91e5ec082506d5 769 PIRSF PIRSF036684 1 756 0.0 T 17-10-2018 IPR012188 NAD(P)-dependent malic enzyme GO:0004470|GO:0006108|GO:0046872 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 BJD13_21795 4077fd4d0e4e8224de91e5ec082506d5 769 SUPERFAMILY SSF53223 11 162 5.76E-51 T 17-10-2018 BJD13_21795 4077fd4d0e4e8224de91e5ec082506d5 769 Pfam PF01515 Phosphate acetyl/butaryl transferase 428 748 1.4E-90 T 17-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 BJD13_21795 4077fd4d0e4e8224de91e5ec082506d5 769 Pfam PF03949 Malic enzyme, NAD binding domain 166 360 2.4E-20 T 17-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 BJD13_21795 4077fd4d0e4e8224de91e5ec082506d5 769 Gene3D G3DSA:3.40.50.10950 445 748 7.9E-86 T 17-10-2018 BJD13_21795 4077fd4d0e4e8224de91e5ec082506d5 769 Pfam PF00390 Malic enzyme, N-terminal domain 20 152 3.0E-26 T 17-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 BJD13_21795 4077fd4d0e4e8224de91e5ec082506d5 769 Gene3D G3DSA:3.40.50.720 162 444 1.2E-80 T 17-10-2018 BJD13_21795 4077fd4d0e4e8224de91e5ec082506d5 769 SMART SM00919 164 399 1.8E-128 T 17-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 BJD13_21795 4077fd4d0e4e8224de91e5ec082506d5 769 Gene3D G3DSA:3.40.50.10380 1 161 9.8E-68 T 17-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 BJD13_21795 4077fd4d0e4e8224de91e5ec082506d5 769 SUPERFAMILY SSF51735 164 451 4.18E-84 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_17070 8470c7f517de6cc21b4f9b8caa30419e 389 Gene3D G3DSA:3.90.1510.10 42 276 6.4E-142 T 17-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 BJD13_17070 8470c7f517de6cc21b4f9b8caa30419e 389 PIRSF PIRSF006078 1 377 8.4E-136 T 17-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 BJD13_17070 8470c7f517de6cc21b4f9b8caa30419e 389 Gene3D G3DSA:3.40.50.10350 2 360 6.4E-142 T 17-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold BJD13_17070 8470c7f517de6cc21b4f9b8caa30419e 389 Pfam PF02595 Glycerate kinase family 3 373 1.3E-149 T 17-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 BJD13_17070 8470c7f517de6cc21b4f9b8caa30419e 389 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 1.5E-155 T 17-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 BJD13_17070 8470c7f517de6cc21b4f9b8caa30419e 389 SUPERFAMILY SSF110738 1 375 5.89E-139 T 17-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 BJD13_12785 7de74d9f13d2fcc57711343158188f04 313 Pfam PF01551 Peptidase family M23 203 297 2.8E-32 T 17-10-2018 IPR016047 Peptidase M23 BJD13_12785 7de74d9f13d2fcc57711343158188f04 313 SUPERFAMILY SSF51261 80 301 2.46E-58 T 17-10-2018 IPR011055 Duplicated hybrid motif BJD13_12785 7de74d9f13d2fcc57711343158188f04 313 Gene3D G3DSA:2.70.70.10 146 306 2.1E-46 T 17-10-2018 IPR011055 Duplicated hybrid motif BJD13_22275 838d7f2096fe520f010c20c9ba8de990 605 Pfam PF00515 Tetratricopeptide repeat 391 421 1.8E-9 T 17-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 BJD13_22275 838d7f2096fe520f010c20c9ba8de990 605 Pfam PF13519 von Willebrand factor type A domain 102 209 7.1E-11 T 17-10-2018 IPR002035 von Willebrand factor, type A BJD13_22275 838d7f2096fe520f010c20c9ba8de990 605 SUPERFAMILY SSF48452 363 438 4.88E-11 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_22275 838d7f2096fe520f010c20c9ba8de990 605 Gene3D G3DSA:3.40.50.410 92 282 6.4E-31 T 17-10-2018 IPR036465 von Willebrand factor A-like domain superfamily BJD13_22275 838d7f2096fe520f010c20c9ba8de990 605 SMART SM00028 389 422 1.3E-6 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD13_22275 838d7f2096fe520f010c20c9ba8de990 605 SUPERFAMILY SSF53300 99 276 3.44E-18 T 17-10-2018 IPR036465 von Willebrand factor A-like domain superfamily BJD13_22275 838d7f2096fe520f010c20c9ba8de990 605 SMART SM00327 99 288 1.4E-8 T 17-10-2018 IPR002035 von Willebrand factor, type A BJD13_22275 838d7f2096fe520f010c20c9ba8de990 605 Gene3D G3DSA:1.25.40.10 352 462 9.1E-12 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_02080 e0709732e735c8dcd19f47be52c1f52a 293 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 5 275 5.8E-50 T 17-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 BJD13_02080 e0709732e735c8dcd19f47be52c1f52a 293 SUPERFAMILY SSF54506 4 290 2.44E-62 T 17-10-2018 BJD13_02080 e0709732e735c8dcd19f47be52c1f52a 293 Pfam PF02567 Phenazine biosynthesis-like protein 9 271 2.0E-51 T 17-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 BJD13_02080 e0709732e735c8dcd19f47be52c1f52a 293 PIRSF PIRSF016184 1 292 9.9E-69 T 17-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 BJD13_02080 e0709732e735c8dcd19f47be52c1f52a 293 Gene3D G3DSA:3.10.310.10 129 284 2.1E-67 T 17-10-2018 BJD13_02080 e0709732e735c8dcd19f47be52c1f52a 293 Gene3D G3DSA:3.10.310.10 8 286 2.1E-67 T 17-10-2018 BJD13_09275 84add61b23765f64e4b6f72b706b2ab3 161 Gene3D G3DSA:3.40.30.10 1 160 1.1E-65 T 17-10-2018 BJD13_09275 84add61b23765f64e4b6f72b706b2ab3 161 SUPERFAMILY SSF52833 4 159 1.51E-60 T 17-10-2018 IPR036249 Thioredoxin-like superfamily BJD13_09275 84add61b23765f64e4b6f72b706b2ab3 161 Pfam PF00255 Glutathione peroxidase 6 111 1.0E-39 T 17-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 BJD13_09275 84add61b23765f64e4b6f72b706b2ab3 161 PIRSF PIRSF000303 1 161 5.0E-64 T 17-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 BJD13_09275 84add61b23765f64e4b6f72b706b2ab3 161 ProSitePatterns PS00460 Glutathione peroxidases active site. 24 39 - T 17-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 BJD13_09275 84add61b23765f64e4b6f72b706b2ab3 161 PRINTS PR01011 Glutathione peroxidase family signature 22 39 3.3E-20 T 17-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 BJD13_09275 84add61b23765f64e4b6f72b706b2ab3 161 PRINTS PR01011 Glutathione peroxidase family signature 123 132 3.3E-20 T 17-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 BJD13_09275 84add61b23765f64e4b6f72b706b2ab3 161 PRINTS PR01011 Glutathione peroxidase family signature 57 73 3.3E-20 T 17-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 BJD13_01040 87d4b189f0016167a2d6ffc45accd5d5 210 PIRSF PIRSF009320 2 209 1.8E-29 T 17-10-2018 BJD13_01040 87d4b189f0016167a2d6ffc45accd5d5 210 Gene3D G3DSA:3.40.50.300 4 209 1.3E-34 T 17-10-2018 BJD13_01040 87d4b189f0016167a2d6ffc45accd5d5 210 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 184 1.5E-11 T 17-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain BJD13_01040 87d4b189f0016167a2d6ffc45accd5d5 210 SUPERFAMILY SSF52540 1 186 3.53E-32 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_01180 87d4b189f0016167a2d6ffc45accd5d5 210 PIRSF PIRSF009320 2 209 1.8E-29 T 17-10-2018 BJD13_01180 87d4b189f0016167a2d6ffc45accd5d5 210 Gene3D G3DSA:3.40.50.300 4 209 1.3E-34 T 17-10-2018 BJD13_01180 87d4b189f0016167a2d6ffc45accd5d5 210 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 184 1.5E-11 T 17-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain BJD13_01180 87d4b189f0016167a2d6ffc45accd5d5 210 SUPERFAMILY SSF52540 1 186 3.53E-32 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_08345 cb07e29395b2c2c913701ed250bdc0ee 402 SUPERFAMILY SSF53850 133 317 2.61E-53 T 17-10-2018 BJD13_08345 cb07e29395b2c2c913701ed250bdc0ee 402 Pfam PF01817 Chorismate mutase type II 51 130 6.0E-21 T 17-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BJD13_08345 cb07e29395b2c2c913701ed250bdc0ee 402 Gene3D G3DSA:3.40.190.10 214 299 7.0E-55 T 17-10-2018 BJD13_08345 cb07e29395b2c2c913701ed250bdc0ee 402 SMART SM00830 51 132 4.8E-28 T 17-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BJD13_08345 cb07e29395b2c2c913701ed250bdc0ee 402 SUPERFAMILY SSF55021 304 399 1.93E-28 T 17-10-2018 BJD13_08345 cb07e29395b2c2c913701ed250bdc0ee 402 Gene3D G3DSA:3.40.190.10 136 307 7.0E-55 T 17-10-2018 BJD13_08345 cb07e29395b2c2c913701ed250bdc0ee 402 Gene3D G3DSA:3.30.70.260 311 401 6.9E-30 T 17-10-2018 BJD13_08345 cb07e29395b2c2c913701ed250bdc0ee 402 Pfam PF01842 ACT domain 320 384 7.4E-12 T 17-10-2018 IPR002912 ACT domain BJD13_08345 cb07e29395b2c2c913701ed250bdc0ee 402 PIRSF PIRSF001500 41 401 1.1E-138 T 17-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 BJD13_08345 cb07e29395b2c2c913701ed250bdc0ee 402 Gene3D G3DSA:1.20.59.10 49 133 9.4E-27 T 17-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BJD13_08345 cb07e29395b2c2c913701ed250bdc0ee 402 Pfam PF00800 Prephenate dehydratase 134 310 4.6E-59 T 17-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 BJD13_08345 cb07e29395b2c2c913701ed250bdc0ee 402 TIGRFAM TIGR01807 CM_P2: chorismate mutase 47 122 5.0E-23 T 17-10-2018 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 BJD13_08345 cb07e29395b2c2c913701ed250bdc0ee 402 SUPERFAMILY SSF48600 47 135 9.62E-20 T 17-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BJD13_09345 eb28dfa5c2e49086fd1e566bc92d8ea1 397 SUPERFAMILY SSF111369 165 267 8.11E-11 T 17-10-2018 BJD13_09345 eb28dfa5c2e49086fd1e566bc92d8ea1 397 Gene3D G3DSA:2.40.50.100 59 117 5.4E-10 T 17-10-2018 BJD13_09345 eb28dfa5c2e49086fd1e566bc92d8ea1 397 Pfam PF00529 HlyD membrane-fusion protein of T1SS 35 344 2.8E-10 T 17-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 BJD13_09345 eb28dfa5c2e49086fd1e566bc92d8ea1 397 Gene3D G3DSA:1.10.287.470 118 232 3.7E-5 T 17-10-2018 BJD13_09345 eb28dfa5c2e49086fd1e566bc92d8ea1 397 Gene3D G3DSA:2.40.30.170 233 352 1.0E-32 T 17-10-2018 BJD13_09345 eb28dfa5c2e49086fd1e566bc92d8ea1 397 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 289 6.1E-15 T 17-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BJD13_09345 eb28dfa5c2e49086fd1e566bc92d8ea1 397 SUPERFAMILY SSF111369 59 113 6.15E-9 T 17-10-2018 BJD13_11625 07f665c68332bcc0c95c69938ae19c3f 432 SUPERFAMILY SSF53244 296 429 1.23E-27 T 17-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BJD13_11625 07f665c68332bcc0c95c69938ae19c3f 432 Gene3D G3DSA:3.90.190.20 296 432 1.1E-26 T 17-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BJD13_11625 07f665c68332bcc0c95c69938ae19c3f 432 TIGRFAM TIGR01499 folC: bifunctional protein FolC 26 425 5.0E-95 T 17-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 BJD13_11625 07f665c68332bcc0c95c69938ae19c3f 432 SUPERFAMILY SSF53623 6 293 1.37E-83 T 17-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BJD13_11625 07f665c68332bcc0c95c69938ae19c3f 432 Pfam PF02875 Mur ligase family, glutamate ligase domain 294 346 6.8E-6 T 17-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 BJD13_11625 07f665c68332bcc0c95c69938ae19c3f 432 Gene3D G3DSA:3.40.1190.10 1 295 7.6E-90 T 17-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BJD13_11625 07f665c68332bcc0c95c69938ae19c3f 432 Pfam PF08245 Mur ligase middle domain 48 272 8.6E-10 T 17-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 BJD13_11625 07f665c68332bcc0c95c69938ae19c3f 432 PIRSF PIRSF001563 1 432 5.8E-101 T 17-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 BJD13_18855 6874008cbbe7677a93e1177322a7fa34 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 245 261 9.1E-57 T 17-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BJD13_18855 6874008cbbe7677a93e1177322a7fa34 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 191 210 9.1E-57 T 17-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BJD13_18855 6874008cbbe7677a93e1177322a7fa34 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 122 136 9.1E-57 T 17-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BJD13_18855 6874008cbbe7677a93e1177322a7fa34 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 153 172 9.1E-57 T 17-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BJD13_18855 6874008cbbe7677a93e1177322a7fa34 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 300 319 9.1E-57 T 17-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BJD13_18855 6874008cbbe7677a93e1177322a7fa34 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 270 285 9.1E-57 T 17-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BJD13_18855 6874008cbbe7677a93e1177322a7fa34 330 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 245 257 - T 17-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BJD13_18855 6874008cbbe7677a93e1177322a7fa34 330 Gene3D G3DSA:3.20.20.70 1 330 8.7E-144 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD13_18855 6874008cbbe7677a93e1177322a7fa34 330 SUPERFAMILY SSF51569 2 328 5.42E-142 T 17-10-2018 BJD13_18855 6874008cbbe7677a93e1177322a7fa34 330 PIRSF PIRSF001415 1 329 1.2E-148 T 17-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BJD13_18855 6874008cbbe7677a93e1177322a7fa34 330 Pfam PF00490 Delta-aminolevulinic acid dehydratase 6 325 1.0E-138 T 17-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BJD13_18855 6874008cbbe7677a93e1177322a7fa34 330 SMART SM01004 3 326 2.1E-238 T 17-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BJD13_05565 27776f62418243bcc1a74c36872bf07d 1041 SUPERFAMILY SSF82693 143 331 1.14E-21 T 17-10-2018 BJD13_05565 27776f62418243bcc1a74c36872bf07d 1041 SUPERFAMILY SSF82866 803 1023 1.57E-38 T 17-10-2018 BJD13_05565 27776f62418243bcc1a74c36872bf07d 1041 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1035 0.0 T 17-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 BJD13_05565 27776f62418243bcc1a74c36872bf07d 1041 Gene3D G3DSA:3.30.70.1320 132 333 0.0 T 17-10-2018 BJD13_05565 27776f62418243bcc1a74c36872bf07d 1041 Gene3D G3DSA:3.30.2090.10 718 806 0.0 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_05565 27776f62418243bcc1a74c36872bf07d 1041 SUPERFAMILY SSF82714 184 273 3.27E-19 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_05565 27776f62418243bcc1a74c36872bf07d 1041 Gene3D G3DSA:3.30.70.1430 38 814 0.0 T 17-10-2018 BJD13_05565 27776f62418243bcc1a74c36872bf07d 1041 SUPERFAMILY SSF82866 297 497 3.66E-49 T 17-10-2018 BJD13_05565 27776f62418243bcc1a74c36872bf07d 1041 Gene3D G3DSA:1.20.1640.10 513 1019 0.0 T 17-10-2018 BJD13_05565 27776f62418243bcc1a74c36872bf07d 1041 Gene3D G3DSA:3.30.70.1440 666 862 0.0 T 17-10-2018 BJD13_05565 27776f62418243bcc1a74c36872bf07d 1041 Gene3D G3DSA:3.30.70.1430 567 665 0.0 T 17-10-2018 BJD13_05565 27776f62418243bcc1a74c36872bf07d 1041 Gene3D G3DSA:1.20.1640.10 8 512 0.0 T 17-10-2018 BJD13_05565 27776f62418243bcc1a74c36872bf07d 1041 SUPERFAMILY SSF82693 565 668 3.09E-27 T 17-10-2018 BJD13_05565 27776f62418243bcc1a74c36872bf07d 1041 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 3.6E-99 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_05565 27776f62418243bcc1a74c36872bf07d 1041 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 3.6E-99 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_05565 27776f62418243bcc1a74c36872bf07d 1041 PRINTS PR00702 Acriflavin resistance protein family signature 619 633 3.6E-99 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_05565 27776f62418243bcc1a74c36872bf07d 1041 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 3.6E-99 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_05565 27776f62418243bcc1a74c36872bf07d 1041 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 3.6E-99 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_05565 27776f62418243bcc1a74c36872bf07d 1041 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 3.6E-99 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_05565 27776f62418243bcc1a74c36872bf07d 1041 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 3.6E-99 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_05565 27776f62418243bcc1a74c36872bf07d 1041 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 3.6E-99 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_05565 27776f62418243bcc1a74c36872bf07d 1041 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 3.6E-99 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_05565 27776f62418243bcc1a74c36872bf07d 1041 Gene3D G3DSA:3.30.2090.10 180 276 0.0 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_05565 27776f62418243bcc1a74c36872bf07d 1041 SUPERFAMILY SSF82693 38 128 3.66E-25 T 17-10-2018 BJD13_05565 27776f62418243bcc1a74c36872bf07d 1041 Pfam PF00873 AcrB/AcrD/AcrF family 1 1022 0.0 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_05565 27776f62418243bcc1a74c36872bf07d 1041 SUPERFAMILY SSF82714 719 804 1.7E-16 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_17175 cc3aea922361c48994777f621e8dfb49 264 Pfam PF00005 ABC transporter 24 171 7.3E-28 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD13_17175 cc3aea922361c48994777f621e8dfb49 264 SMART SM00382 33 223 3.0E-8 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_17175 cc3aea922361c48994777f621e8dfb49 264 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD13_17175 cc3aea922361c48994777f621e8dfb49 264 Gene3D G3DSA:3.40.50.300 8 259 6.4E-62 T 17-10-2018 BJD13_17175 cc3aea922361c48994777f621e8dfb49 264 SUPERFAMILY SSF52540 7 235 1.36E-61 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_10055 f547bfb0aade0f5f51610be7f3dffbb1 461 Pfam PF06114 IrrE N-terminal-like domain 190 312 4.1E-21 T 17-10-2018 IPR010359 IrrE N-terminal-like domain BJD13_10055 f547bfb0aade0f5f51610be7f3dffbb1 461 SUPERFAMILY SSF47413 9 64 1.04E-12 T 17-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BJD13_10055 f547bfb0aade0f5f51610be7f3dffbb1 461 Pfam PF09856 Predicted transcriptional regulator (DUF2083) 313 454 1.6E-61 T 17-10-2018 IPR018653 Domain of unknown function DUF2083,transcriptional regulator BJD13_10055 f547bfb0aade0f5f51610be7f3dffbb1 461 SMART SM00530 15 69 7.1E-9 T 17-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BJD13_10055 f547bfb0aade0f5f51610be7f3dffbb1 461 Pfam PF13560 Helix-turn-helix domain 11 64 7.2E-12 T 17-10-2018 BJD13_10055 f547bfb0aade0f5f51610be7f3dffbb1 461 PIRSF PIRSF019251 6 457 1.1E-153 T 17-10-2018 IPR026281 HTH-type transcriptional regulator RamB GO:0006355 BJD13_10055 f547bfb0aade0f5f51610be7f3dffbb1 461 Gene3D G3DSA:1.10.260.40 2 74 2.2E-14 T 17-10-2018 BJD13_00230 1e6725c5b22781469eb8f81062bc0e54 563 Pfam PF17391 Urocanase N-terminal domain 14 140 9.0E-62 T 17-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BJD13_00230 1e6725c5b22781469eb8f81062bc0e54 563 Hamap MF_00577 Urocanate hydratase [hutU]. 6 562 47.701 T 17-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BJD13_00230 1e6725c5b22781469eb8f81062bc0e54 563 SUPERFAMILY SSF111326 9 560 2.88E-246 T 17-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BJD13_00230 1e6725c5b22781469eb8f81062bc0e54 563 PIRSF PIRSF001423 2 563 4.7E-278 T 17-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BJD13_00230 1e6725c5b22781469eb8f81062bc0e54 563 Pfam PF01175 Urocanase Rossmann-like domain 143 354 6.4E-71 T 17-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BJD13_00230 1e6725c5b22781469eb8f81062bc0e54 563 TIGRFAM TIGR01228 hutU: urocanate hydratase 12 559 2.0E-276 T 17-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BJD13_00230 1e6725c5b22781469eb8f81062bc0e54 563 ProSitePatterns PS01233 Urocanase signature. 448 463 - T 17-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BJD13_00230 1e6725c5b22781469eb8f81062bc0e54 563 Gene3D G3DSA:3.40.50.10730 144 355 6.7E-241 T 17-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BJD13_00230 1e6725c5b22781469eb8f81062bc0e54 563 Gene3D G3DSA:3.40.1770.10 19 547 6.7E-241 T 17-10-2018 BJD13_00230 1e6725c5b22781469eb8f81062bc0e54 563 Pfam PF17392 Urocanase C-terminal domain 358 552 2.6E-93 T 17-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BJD13_23130 0263bc715db52bd204362f1f71884efd 174 Gene3D G3DSA:3.30.420.10 4 160 4.0E-44 T 17-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BJD13_23130 0263bc715db52bd204362f1f71884efd 174 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 115 149 - T 17-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 BJD13_23130 0263bc715db52bd204362f1f71884efd 174 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 156 7.8E-49 T 17-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 BJD13_23130 0263bc715db52bd204362f1f71884efd 174 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 1.2E-34 T 17-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 BJD13_23130 0263bc715db52bd204362f1f71884efd 174 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 140 152 1.2E-34 T 17-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 BJD13_23130 0263bc715db52bd204362f1f71884efd 174 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 109 128 1.2E-34 T 17-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 BJD13_23130 0263bc715db52bd204362f1f71884efd 174 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 63 79 1.2E-34 T 17-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 BJD13_23130 0263bc715db52bd204362f1f71884efd 174 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 85 101 1.2E-34 T 17-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 BJD13_23130 0263bc715db52bd204362f1f71884efd 174 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 155 45.102 T 17-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 BJD13_23130 0263bc715db52bd204362f1f71884efd 174 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 152 1.5E-46 T 17-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 BJD13_23130 0263bc715db52bd204362f1f71884efd 174 SUPERFAMILY SSF53098 3 156 2.23E-46 T 17-10-2018 IPR012337 Ribonuclease H-like superfamily BJD13_15125 2f7036ebbe5b562bf77668a814e5645b 287 Pfam PF01144 Coenzyme A transferase 6 222 5.2E-18 T 17-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 BJD13_15125 2f7036ebbe5b562bf77668a814e5645b 287 SUPERFAMILY SSF100950 5 274 6.58E-72 T 17-10-2018 IPR037171 NagB/RpiA transferase-like BJD13_15125 2f7036ebbe5b562bf77668a814e5645b 287 Gene3D G3DSA:3.40.1080.10 5 275 2.0E-63 T 17-10-2018 BJD13_15125 2f7036ebbe5b562bf77668a814e5645b 287 Gene3D G3DSA:3.30.30.40 118 154 2.0E-63 T 17-10-2018 BJD13_15125 2f7036ebbe5b562bf77668a814e5645b 287 SMART SM00882 5 224 9.3E-34 T 17-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 BJD13_21975 7564aa1405c9656ababa3783f69837c1 452 SUPERFAMILY SSF51984 2 90 3.66E-18 T 17-10-2018 BJD13_21975 7564aa1405c9656ababa3783f69837c1 452 Gene3D G3DSA:3.40.1190.10 93 313 7.6E-60 T 17-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BJD13_21975 7564aa1405c9656ababa3783f69837c1 452 Pfam PF01225 Mur ligase family, catalytic domain 4 100 1.2E-14 T 17-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 BJD13_21975 7564aa1405c9656ababa3783f69837c1 452 Pfam PF08245 Mur ligase middle domain 109 294 8.3E-25 T 17-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 BJD13_21975 7564aa1405c9656ababa3783f69837c1 452 SUPERFAMILY SSF53623 96 312 5.23E-53 T 17-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BJD13_21975 7564aa1405c9656ababa3783f69837c1 452 Pfam PF02875 Mur ligase family, glutamate ligase domain 314 387 3.6E-10 T 17-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 BJD13_21975 7564aa1405c9656ababa3783f69837c1 452 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 3 451 3.4E-187 T 17-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 BJD13_21975 7564aa1405c9656ababa3783f69837c1 452 SUPERFAMILY SSF53244 314 450 2.35E-33 T 17-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BJD13_21975 7564aa1405c9656ababa3783f69837c1 452 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 2 452 56.064 T 17-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 BJD13_21975 7564aa1405c9656ababa3783f69837c1 452 Gene3D G3DSA:3.40.50.720 1 91 3.7E-30 T 17-10-2018 BJD13_21975 7564aa1405c9656ababa3783f69837c1 452 Gene3D G3DSA:3.90.190.20 317 452 3.1E-28 T 17-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BJD13_04520 ecc462db483f98907c5f5b30302f15a4 188 TIGRFAM TIGR00038 efp: translation elongation factor P 6 187 3.7E-73 T 17-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 BJD13_04520 ecc462db483f98907c5f5b30302f15a4 188 SUPERFAMILY SSF50249 130 187 4.11E-18 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD13_04520 ecc462db483f98907c5f5b30302f15a4 188 Gene3D G3DSA:2.40.50.140 66 127 1.4E-28 T 17-10-2018 BJD13_04520 ecc462db483f98907c5f5b30302f15a4 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 49.616 T 17-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 BJD13_04520 ecc462db483f98907c5f5b30302f15a4 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 9.0E-20 T 17-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 BJD13_04520 ecc462db483f98907c5f5b30302f15a4 188 Gene3D G3DSA:2.30.30.30 1 65 1.4E-20 T 17-10-2018 IPR014722 Ribosomal protein L2, domain 2 BJD13_04520 ecc462db483f98907c5f5b30302f15a4 188 PIRSF PIRSF005901 2 188 1.1E-62 T 17-10-2018 IPR020599 Translation elongation factor P/YeiP BJD13_04520 ecc462db483f98907c5f5b30302f15a4 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 17-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site BJD13_04520 ecc462db483f98907c5f5b30302f15a4 188 SMART SM01185 69 123 1.2E-19 T 17-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 BJD13_04520 ecc462db483f98907c5f5b30302f15a4 188 Gene3D G3DSA:2.40.50.140 130 188 1.8E-27 T 17-10-2018 BJD13_04520 ecc462db483f98907c5f5b30302f15a4 188 SMART SM00841 131 186 4.5E-32 T 17-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 BJD13_04520 ecc462db483f98907c5f5b30302f15a4 188 SUPERFAMILY SSF50249 69 128 1.46E-15 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD13_04520 ecc462db483f98907c5f5b30302f15a4 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 1.5E-25 T 17-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 BJD13_04520 ecc462db483f98907c5f5b30302f15a4 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 6 62 5.3E-21 T 17-10-2018 IPR013185 Translation elongation factor, KOW-like BJD13_04520 ecc462db483f98907c5f5b30302f15a4 188 SUPERFAMILY SSF50104 5 65 4.33E-17 T 17-10-2018 IPR008991 Translation protein SH3-like domain superfamily BJD13_02375 2eb3b8e6a051a246250ee7868a0a5f54 168 Gene3D G3DSA:3.30.1490.190 110 167 1.1E-15 T 17-10-2018 BJD13_02375 2eb3b8e6a051a246250ee7868a0a5f54 168 Pfam PF01475 Ferric uptake regulator family 35 157 1.7E-10 T 17-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 BJD13_02375 2eb3b8e6a051a246250ee7868a0a5f54 168 Gene3D G3DSA:1.10.10.10 19 107 5.7E-30 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_02375 2eb3b8e6a051a246250ee7868a0a5f54 168 SUPERFAMILY SSF46785 30 162 3.74E-27 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_08255 942e355bbe1a173d1152ec44c10c42aa 690 SUPERFAMILY SSF55785 144 267 1.54E-24 T 17-10-2018 IPR035965 PAS domain superfamily BJD13_08255 942e355bbe1a173d1152ec44c10c42aa 690 Pfam PF00512 His Kinase A (phospho-acceptor) domain 317 383 1.0E-7 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_08255 942e355bbe1a173d1152ec44c10c42aa 690 SUPERFAMILY SSF55874 375 548 2.1E-38 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_08255 942e355bbe1a173d1152ec44c10c42aa 690 SMART SM00448 570 682 1.3E-19 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_08255 942e355bbe1a173d1152ec44c10c42aa 690 Pfam PF08448 PAS fold 163 270 1.9E-20 T 17-10-2018 IPR013656 PAS fold-4 BJD13_08255 942e355bbe1a173d1152ec44c10c42aa 690 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 426 548 3.6E-19 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_08255 942e355bbe1a173d1152ec44c10c42aa 690 Gene3D G3DSA:3.30.450.20 151 283 1.5E-26 T 17-10-2018 BJD13_08255 942e355bbe1a173d1152ec44c10c42aa 690 Pfam PF00072 Response regulator receiver domain 572 677 3.8E-16 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_08255 942e355bbe1a173d1152ec44c10c42aa 690 SMART SM00388 316 384 3.9E-6 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_08255 942e355bbe1a173d1152ec44c10c42aa 690 SMART SM00086 227 269 0.0017 T 17-10-2018 IPR001610 PAC motif BJD13_08255 942e355bbe1a173d1152ec44c10c42aa 690 SUPERFAMILY SSF47384 299 382 1.06E-10 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD13_08255 942e355bbe1a173d1152ec44c10c42aa 690 SMART SM00387 425 550 8.3E-28 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_08255 942e355bbe1a173d1152ec44c10c42aa 690 PRINTS PR00344 Bacterial sensor protein C-terminal signature 534 547 2.4E-16 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_08255 942e355bbe1a173d1152ec44c10c42aa 690 PRINTS PR00344 Bacterial sensor protein C-terminal signature 510 528 2.4E-16 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_08255 942e355bbe1a173d1152ec44c10c42aa 690 PRINTS PR00344 Bacterial sensor protein C-terminal signature 497 507 2.4E-16 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_08255 942e355bbe1a173d1152ec44c10c42aa 690 PRINTS PR00344 Bacterial sensor protein C-terminal signature 479 493 2.4E-16 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_08255 942e355bbe1a173d1152ec44c10c42aa 690 SUPERFAMILY SSF52172 569 687 6.55E-26 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_08255 942e355bbe1a173d1152ec44c10c42aa 690 Gene3D G3DSA:1.10.287.130 308 383 4.1E-18 T 17-10-2018 BJD13_08255 942e355bbe1a173d1152ec44c10c42aa 690 Gene3D G3DSA:3.40.50.2300 567 688 3.1E-25 T 17-10-2018 BJD13_08255 942e355bbe1a173d1152ec44c10c42aa 690 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 153 271 1.2E-11 T 17-10-2018 IPR000014 PAS domain BJD13_08255 942e355bbe1a173d1152ec44c10c42aa 690 SMART SM00091 156 222 4.6E-7 T 17-10-2018 IPR000014 PAS domain BJD13_08255 942e355bbe1a173d1152ec44c10c42aa 690 Gene3D G3DSA:3.30.565.10 385 555 2.2E-44 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_02265 aa38babfc90bef86301ffa7e694150f4 520 SMART SM00155 176 203 2.2E-4 T 17-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 BJD13_02265 aa38babfc90bef86301ffa7e694150f4 520 SMART SM00155 411 438 5.6E-6 T 17-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 BJD13_02265 aa38babfc90bef86301ffa7e694150f4 520 SUPERFAMILY SSF56024 230 472 1.77E-35 T 17-10-2018 BJD13_02265 aa38babfc90bef86301ffa7e694150f4 520 SUPERFAMILY SSF56024 52 248 7.53E-39 T 17-10-2018 BJD13_02265 aa38babfc90bef86301ffa7e694150f4 520 Gene3D G3DSA:3.30.870.10 72 256 2.2E-36 T 17-10-2018 BJD13_02265 aa38babfc90bef86301ffa7e694150f4 520 Pfam PF13091 PLD-like domain 324 463 5.6E-20 T 17-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 BJD13_02265 aa38babfc90bef86301ffa7e694150f4 520 Pfam PF13091 PLD-like domain 88 235 6.7E-16 T 17-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 BJD13_02265 aa38babfc90bef86301ffa7e694150f4 520 Gene3D G3DSA:3.30.870.10 309 482 4.1E-37 T 17-10-2018 BJD13_16200 d35fcd5be21c437b8a1a1584bc641171 160 Pfam PF01037 Lrp/AsnC ligand binding domain 73 147 3.9E-23 T 17-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain BJD13_16200 d35fcd5be21c437b8a1a1584bc641171 160 SUPERFAMILY SSF54909 67 156 4.96E-22 T 17-10-2018 IPR011008 Dimeric alpha-beta barrel BJD13_16200 d35fcd5be21c437b8a1a1584bc641171 160 Gene3D G3DSA:1.10.10.10 2 60 2.7E-21 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_16200 d35fcd5be21c437b8a1a1584bc641171 160 Gene3D G3DSA:3.30.70.920 61 144 3.0E-28 T 17-10-2018 BJD13_16200 d35fcd5be21c437b8a1a1584bc641171 160 SMART SM00344 7 116 1.6E-31 T 17-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 BJD13_16200 d35fcd5be21c437b8a1a1584bc641171 160 SUPERFAMILY SSF46785 6 66 2.25E-15 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_16200 d35fcd5be21c437b8a1a1584bc641171 160 Pfam PF13404 AsnC-type helix-turn-helix domain 7 48 3.1E-15 T 17-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BJD13_16200 d35fcd5be21c437b8a1a1584bc641171 160 ProSitePatterns PS00519 AsnC-type HTH domain signature. 25 51 - T 17-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site BJD13_16200 d35fcd5be21c437b8a1a1584bc641171 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 23 34 2.7E-12 T 17-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BJD13_16200 d35fcd5be21c437b8a1a1584bc641171 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 7 23 2.7E-12 T 17-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BJD13_16200 d35fcd5be21c437b8a1a1584bc641171 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 53 2.7E-12 T 17-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BJD13_15700 226e45b704847f354e9b97c5d7898e78 111 Pfam PF11804 Protein of unknown function (DUF3325) 4 104 5.2E-28 T 17-10-2018 IPR021762 Protein of unknown function DUF3325 BJD13_20765 2dcbbeb8c77b1d938a390f2b781ac38c 226 Pfam PF13419 Haloacid dehalogenase-like hydrolase 14 190 1.2E-26 T 17-10-2018 BJD13_20765 2dcbbeb8c77b1d938a390f2b781ac38c 226 SUPERFAMILY SSF56784 10 221 1.34E-47 T 17-10-2018 IPR036412 HAD-like superfamily BJD13_20765 2dcbbeb8c77b1d938a390f2b781ac38c 226 Gene3D G3DSA:3.40.50.1000 13 199 3.4E-47 T 17-10-2018 IPR023214 HAD superfamily BJD13_20765 2dcbbeb8c77b1d938a390f2b781ac38c 226 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 70 190 2.2E-16 T 17-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BJD13_20765 2dcbbeb8c77b1d938a390f2b781ac38c 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 11 22 4.0E-5 T 17-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BJD13_20765 2dcbbeb8c77b1d938a390f2b781ac38c 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 136 152 4.0E-5 T 17-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BJD13_20765 2dcbbeb8c77b1d938a390f2b781ac38c 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 154 174 4.0E-5 T 17-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BJD13_20765 2dcbbeb8c77b1d938a390f2b781ac38c 226 Gene3D G3DSA:1.10.150.240 26 91 3.4E-47 T 17-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BJD13_06130 f0a27752e488aa1f50f4c25fecc80e53 310 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 216 0.0022 T 17-10-2018 BJD13_06130 f0a27752e488aa1f50f4c25fecc80e53 310 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.5E-7 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_06130 f0a27752e488aa1f50f4c25fecc80e53 310 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.5E-7 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_06130 f0a27752e488aa1f50f4c25fecc80e53 310 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 1.5E-7 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_06130 f0a27752e488aa1f50f4c25fecc80e53 310 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.4E-23 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_06130 f0a27752e488aa1f50f4c25fecc80e53 310 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.4E-23 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_06130 f0a27752e488aa1f50f4c25fecc80e53 310 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.4E-23 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_06130 f0a27752e488aa1f50f4c25fecc80e53 310 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.4E-23 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_06130 f0a27752e488aa1f50f4c25fecc80e53 310 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.4E-23 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_06130 f0a27752e488aa1f50f4c25fecc80e53 310 Pfam PF00106 short chain dehydrogenase 12 195 2.7E-44 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_06130 f0a27752e488aa1f50f4c25fecc80e53 310 Gene3D G3DSA:3.40.50.720 9 245 6.4E-57 T 17-10-2018 BJD13_06130 f0a27752e488aa1f50f4c25fecc80e53 310 SUPERFAMILY SSF51735 5 257 1.62E-59 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_06980 599fc40109dc2bebc3205ef9636022e2 726 Gene3D G3DSA:3.40.50.2300 448 590 5.4E-39 T 17-10-2018 BJD13_06980 599fc40109dc2bebc3205ef9636022e2 726 Pfam PF01627 Hpt domain 625 700 4.6E-6 T 17-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BJD13_06980 599fc40109dc2bebc3205ef9636022e2 726 Pfam PF00512 His Kinase A (phospho-acceptor) domain 188 253 1.0E-18 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_06980 599fc40109dc2bebc3205ef9636022e2 726 Gene3D G3DSA:1.20.120.160 597 710 1.3E-12 T 17-10-2018 IPR036641 HPT domain superfamily GO:0000160 BJD13_06980 599fc40109dc2bebc3205ef9636022e2 726 SUPERFAMILY SSF52172 460 581 3.42E-32 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_06980 599fc40109dc2bebc3205ef9636022e2 726 PRINTS PR00344 Bacterial sensor protein C-terminal signature 360 370 2.2E-13 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_06980 599fc40109dc2bebc3205ef9636022e2 726 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 395 2.2E-13 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_06980 599fc40109dc2bebc3205ef9636022e2 726 PRINTS PR00344 Bacterial sensor protein C-terminal signature 342 356 2.2E-13 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_06980 599fc40109dc2bebc3205ef9636022e2 726 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 414 2.2E-13 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_06980 599fc40109dc2bebc3205ef9636022e2 726 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 300 416 5.3E-26 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_06980 599fc40109dc2bebc3205ef9636022e2 726 Gene3D G3DSA:3.30.565.10 252 418 1.4E-44 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_06980 599fc40109dc2bebc3205ef9636022e2 726 SUPERFAMILY SSF55874 243 415 1.1E-38 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_06980 599fc40109dc2bebc3205ef9636022e2 726 SMART SM00448 462 577 4.4E-33 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_06980 599fc40109dc2bebc3205ef9636022e2 726 SMART SM00387 300 417 1.8E-35 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_06980 599fc40109dc2bebc3205ef9636022e2 726 SUPERFAMILY SSF47384 171 254 4.32E-21 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD13_06980 599fc40109dc2bebc3205ef9636022e2 726 SUPERFAMILY SSF47226 602 713 1.31E-16 T 17-10-2018 IPR036641 HPT domain superfamily GO:0000160 BJD13_06980 599fc40109dc2bebc3205ef9636022e2 726 SMART SM00073 614 712 2.1E-20 T 17-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BJD13_06980 599fc40109dc2bebc3205ef9636022e2 726 SMART SM00388 188 253 3.4E-24 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_06980 599fc40109dc2bebc3205ef9636022e2 726 Gene3D G3DSA:1.10.287.130 168 251 1.2E-25 T 17-10-2018 BJD13_06980 599fc40109dc2bebc3205ef9636022e2 726 Pfam PF00072 Response regulator receiver domain 465 577 5.9E-24 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_05010 825be8921c6ed789e3f3b1a4c45ed0fe 523 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 152 173 9.1E-23 T 17-10-2018 BJD13_05010 825be8921c6ed789e3f3b1a4c45ed0fe 523 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 77 102 9.1E-23 T 17-10-2018 BJD13_05010 825be8921c6ed789e3f3b1a4c45ed0fe 523 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 307 319 9.1E-23 T 17-10-2018 BJD13_05010 825be8921c6ed789e3f3b1a4c45ed0fe 523 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 218 239 9.1E-23 T 17-10-2018 BJD13_05010 825be8921c6ed789e3f3b1a4c45ed0fe 523 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 240 266 9.1E-23 T 17-10-2018 BJD13_05010 825be8921c6ed789e3f3b1a4c45ed0fe 523 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 70 111 8.2E-8 T 17-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_05010 825be8921c6ed789e3f3b1a4c45ed0fe 523 Pfam PF00361 Proton-conducting membrane transporter 128 346 1.2E-39 T 17-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_10125 74c19675d600c0ec23c31236f1747b3c 204 ProSitePatterns PS00018 EF-hand calcium-binding domain. 181 193 - T 17-10-2018 IPR018247 EF-Hand 1, calcium-binding site BJD13_10125 74c19675d600c0ec23c31236f1747b3c 204 Pfam PF06078 Bacterial protein of unknown function (DUF937) 9 143 2.5E-29 T 17-10-2018 IPR009282 Protein of unknown function DUF937 BJD13_22680 365aae0231f5dd1b3b0491cc8a44a8c2 444 Gene3D G3DSA:1.10.287.130 184 302 3.8E-21 T 17-10-2018 BJD13_22680 365aae0231f5dd1b3b0491cc8a44a8c2 444 Gene3D G3DSA:3.30.565.10 303 443 6.9E-23 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_22680 365aae0231f5dd1b3b0491cc8a44a8c2 444 Pfam PF00512 His Kinase A (phospho-acceptor) domain 237 301 4.1E-16 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_22680 365aae0231f5dd1b3b0491cc8a44a8c2 444 SUPERFAMILY SSF55874 306 442 3.41E-25 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_22680 365aae0231f5dd1b3b0491cc8a44a8c2 444 SUPERFAMILY SSF47384 218 301 2.75E-18 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD13_22680 365aae0231f5dd1b3b0491cc8a44a8c2 444 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 345 440 2.5E-14 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_22680 365aae0231f5dd1b3b0491cc8a44a8c2 444 SMART SM00387 341 444 1.8E-22 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_22680 365aae0231f5dd1b3b0491cc8a44a8c2 444 SMART SM00388 235 301 1.9E-18 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_09025 ad17131b8af0cd0faa2dacc5049d11fa 642 PRINTS PR00301 70kDa heat shock protein signature 3 16 2.5E-81 T 17-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BJD13_09025 ad17131b8af0cd0faa2dacc5049d11fa 642 PRINTS PR00301 70kDa heat shock protein signature 31 43 2.5E-81 T 17-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BJD13_09025 ad17131b8af0cd0faa2dacc5049d11fa 642 PRINTS PR00301 70kDa heat shock protein signature 335 351 2.5E-81 T 17-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BJD13_09025 ad17131b8af0cd0faa2dacc5049d11fa 642 PRINTS PR00301 70kDa heat shock protein signature 470 486 2.5E-81 T 17-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BJD13_09025 ad17131b8af0cd0faa2dacc5049d11fa 642 PRINTS PR00301 70kDa heat shock protein signature 389 408 2.5E-81 T 17-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BJD13_09025 ad17131b8af0cd0faa2dacc5049d11fa 642 PRINTS PR00301 70kDa heat shock protein signature 54 62 2.5E-81 T 17-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BJD13_09025 ad17131b8af0cd0faa2dacc5049d11fa 642 PRINTS PR00301 70kDa heat shock protein signature 199 209 2.5E-81 T 17-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BJD13_09025 ad17131b8af0cd0faa2dacc5049d11fa 642 PRINTS PR00301 70kDa heat shock protein signature 139 159 2.5E-81 T 17-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BJD13_09025 ad17131b8af0cd0faa2dacc5049d11fa 642 PRINTS PR00301 70kDa heat shock protein signature 366 386 2.5E-81 T 17-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BJD13_09025 ad17131b8af0cd0faa2dacc5049d11fa 642 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 338 352 - T 17-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 BJD13_09025 ad17131b8af0cd0faa2dacc5049d11fa 642 Gene3D G3DSA:3.30.420.40 181 367 3.5E-166 T 17-10-2018 BJD13_09025 ad17131b8af0cd0faa2dacc5049d11fa 642 Gene3D G3DSA:3.30.420.40 5 380 3.5E-166 T 17-10-2018 BJD13_09025 ad17131b8af0cd0faa2dacc5049d11fa 642 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 636 36.274 T 17-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 BJD13_09025 ad17131b8af0cd0faa2dacc5049d11fa 642 SUPERFAMILY SSF53067 188 383 7.41E-68 T 17-10-2018 BJD13_09025 ad17131b8af0cd0faa2dacc5049d11fa 642 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 601 1.9E-284 T 17-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 BJD13_09025 ad17131b8af0cd0faa2dacc5049d11fa 642 Gene3D G3DSA:2.60.34.10 384 524 5.3E-63 T 17-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 BJD13_09025 ad17131b8af0cd0faa2dacc5049d11fa 642 SUPERFAMILY SSF100920 385 541 1.96E-59 T 17-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 BJD13_09025 ad17131b8af0cd0faa2dacc5049d11fa 642 Gene3D G3DSA:1.20.1270.10 525 604 2.0E-22 T 17-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 BJD13_09025 ad17131b8af0cd0faa2dacc5049d11fa 642 Gene3D G3DSA:3.90.640.10 230 317 3.5E-166 T 17-10-2018 BJD13_09025 ad17131b8af0cd0faa2dacc5049d11fa 642 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 193 206 - T 17-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 BJD13_09025 ad17131b8af0cd0faa2dacc5049d11fa 642 SUPERFAMILY SSF53067 4 185 2.36E-65 T 17-10-2018 BJD13_09025 ad17131b8af0cd0faa2dacc5049d11fa 642 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 17-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 BJD13_09025 ad17131b8af0cd0faa2dacc5049d11fa 642 Pfam PF00012 Hsp70 protein 4 601 2.8E-260 T 17-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BJD13_09410 8afa8569cd45ea949f5c3bea8446e2e4 398 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 255 289 9.6E-5 T 17-10-2018 IPR001451 Hexapeptide repeat BJD13_09410 8afa8569cd45ea949f5c3bea8446e2e4 398 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 298 332 7.0E-11 T 17-10-2018 IPR001451 Hexapeptide repeat BJD13_09410 8afa8569cd45ea949f5c3bea8446e2e4 398 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 129 395 2.5E-129 T 17-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 BJD13_09410 8afa8569cd45ea949f5c3bea8446e2e4 398 Gene3D G3DSA:1.10.166.10 113 193 9.2E-25 T 17-10-2018 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily KEGG: 00300+2.3.1.117 BJD13_09410 8afa8569cd45ea949f5c3bea8446e2e4 398 Gene3D G3DSA:2.160.10.10 210 380 3.7E-56 T 17-10-2018 BJD13_09410 8afa8569cd45ea949f5c3bea8446e2e4 398 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 126 192 2.7E-22 T 17-10-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 BJD13_09410 8afa8569cd45ea949f5c3bea8446e2e4 398 SUPERFAMILY SSF51161 129 379 9.01E-72 T 17-10-2018 IPR011004 Trimeric LpxA-like superfamily BJD13_09410 8afa8569cd45ea949f5c3bea8446e2e4 398 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 123 395 54.611 T 17-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 BJD13_18465 2481be7ee79ec0afc018c53531aa2b8f 238 Gene3D G3DSA:3.60.40.10 1 238 5.5E-46 T 17-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BJD13_18465 2481be7ee79ec0afc018c53531aa2b8f 238 Pfam PF13672 Protein phosphatase 2C 17 198 1.8E-17 T 17-10-2018 BJD13_18465 2481be7ee79ec0afc018c53531aa2b8f 238 SMART SM00331 11 236 2.3E-4 T 17-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BJD13_18465 2481be7ee79ec0afc018c53531aa2b8f 238 SMART SM00332 1 234 3.6E-12 T 17-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BJD13_18465 2481be7ee79ec0afc018c53531aa2b8f 238 SUPERFAMILY SSF81606 5 237 5.36E-49 T 17-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BJD13_07850 36d7caf48bd99cb5437b895a23651d35 314 Gene3D G3DSA:3.40.190.10 167 266 2.1E-14 T 17-10-2018 BJD13_07850 36d7caf48bd99cb5437b895a23651d35 314 Gene3D G3DSA:1.10.10.10 2 89 8.4E-19 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_07850 36d7caf48bd99cb5437b895a23651d35 314 SUPERFAMILY SSF53850 91 290 3.26E-26 T 17-10-2018 BJD13_07850 36d7caf48bd99cb5437b895a23651d35 314 Pfam PF03466 LysR substrate binding domain 94 287 1.4E-20 T 17-10-2018 IPR005119 LysR, substrate-binding BJD13_07850 36d7caf48bd99cb5437b895a23651d35 314 SUPERFAMILY SSF46785 4 88 1.13E-16 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_07850 36d7caf48bd99cb5437b895a23651d35 314 Gene3D G3DSA:3.40.190.10 112 275 2.1E-14 T 17-10-2018 BJD13_07850 36d7caf48bd99cb5437b895a23651d35 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.2E-16 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_10220 31a722c1f4027534f600bd0c527ead5e 122 Gene3D G3DSA:3.40.50.2300 1 121 2.3E-26 T 17-10-2018 BJD13_10220 31a722c1f4027534f600bd0c527ead5e 122 Pfam PF00072 Response regulator receiver domain 8 115 2.8E-18 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_10220 31a722c1f4027534f600bd0c527ead5e 122 SMART SM00448 5 115 2.1E-21 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_10220 31a722c1f4027534f600bd0c527ead5e 122 SUPERFAMILY SSF52172 4 118 2.7E-25 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_17210 70de05dbd53d042e49e46bfbd712f22d 1137 Gene3D G3DSA:1.10.486.10 435 645 3.0E-139 T 17-10-2018 BJD13_17210 70de05dbd53d042e49e46bfbd712f22d 1137 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 8 1115 16.885 T 17-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 BJD13_17210 70de05dbd53d042e49e46bfbd712f22d 1137 Gene3D G3DSA:3.40.50.10930 11 285 4.6E-58 T 17-10-2018 BJD13_17210 70de05dbd53d042e49e46bfbd712f22d 1137 Gene3D G3DSA:3.40.50.300 320 791 3.0E-139 T 17-10-2018 BJD13_17210 70de05dbd53d042e49e46bfbd712f22d 1137 SUPERFAMILY SSF52540 345 793 2.26E-73 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_17210 70de05dbd53d042e49e46bfbd712f22d 1137 SUPERFAMILY SSF52980 806 1108 1.07E-53 T 17-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 BJD13_17210 70de05dbd53d042e49e46bfbd712f22d 1137 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 9 1071 5.0E-304 T 17-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 BJD13_17210 70de05dbd53d042e49e46bfbd712f22d 1137 PIRSF PIRSF000980 8 1117 0.0 T 17-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 BJD13_17210 70de05dbd53d042e49e46bfbd712f22d 1137 Gene3D G3DSA:1.10.10.160 87 180 4.6E-58 T 17-10-2018 IPR013986 DExx box DNA helicase domain superfamily BJD13_17210 70de05dbd53d042e49e46bfbd712f22d 1137 SUPERFAMILY SSF52540 9 331 5.84E-67 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_17210 70de05dbd53d042e49e46bfbd712f22d 1137 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 9 790 1.2E-211 T 17-10-2018 BJD13_22910 79005f700d1f0a9c574ff80c45119991 327 TIGRFAM TIGR01140 L_thr_O3P_dcar: threonine-phosphate decarboxylase 4 323 1.0E-110 T 17-10-2018 IPR005860 L-threonine-O-3-phosphate decarboxylase GO:0003824|GO:0009236 KEGG: 00860+4.1.1.81|MetaCyc: PWY-5443 BJD13_22910 79005f700d1f0a9c574ff80c45119991 327 Gene3D G3DSA:3.90.1150.10 22 300 3.1E-48 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD13_22910 79005f700d1f0a9c574ff80c45119991 327 Pfam PF00155 Aminotransferase class I and II 54 308 5.7E-29 T 17-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BJD13_22910 79005f700d1f0a9c574ff80c45119991 327 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 189 202 - T 17-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 BJD13_22910 79005f700d1f0a9c574ff80c45119991 327 Gene3D G3DSA:3.40.640.10 34 237 3.1E-48 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD13_22910 79005f700d1f0a9c574ff80c45119991 327 SUPERFAMILY SSF53383 3 314 2.39E-53 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD13_06495 923d38b02c67b93e81fe759040ad7b49 467 PRINTS PR00045 Sigma-54 factor signature 361 373 3.4E-27 T 17-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BJD13_06495 923d38b02c67b93e81fe759040ad7b49 467 PRINTS PR00045 Sigma-54 factor signature 432 450 3.4E-27 T 17-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BJD13_06495 923d38b02c67b93e81fe759040ad7b49 467 PRINTS PR00045 Sigma-54 factor signature 377 388 3.4E-27 T 17-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BJD13_06495 923d38b02c67b93e81fe759040ad7b49 467 PRINTS PR00045 Sigma-54 factor signature 173 190 3.4E-27 T 17-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BJD13_06495 923d38b02c67b93e81fe759040ad7b49 467 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 7 49 2.5E-12 T 17-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BJD13_06495 923d38b02c67b93e81fe759040ad7b49 467 Gene3D G3DSA:1.10.10.1330 107 244 3.2E-12 T 17-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily BJD13_06495 923d38b02c67b93e81fe759040ad7b49 467 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 456 2.0E-108 T 17-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BJD13_06495 923d38b02c67b93e81fe759040ad7b49 467 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 349 368 - T 17-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BJD13_06495 923d38b02c67b93e81fe759040ad7b49 467 Pfam PF04552 Sigma-54, DNA binding domain 304 457 2.0E-57 T 17-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding BJD13_06495 923d38b02c67b93e81fe759040ad7b49 467 Pfam PF04963 Sigma-54 factor, core binding domain 112 288 4.7E-31 T 17-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 BJD13_06495 923d38b02c67b93e81fe759040ad7b49 467 Gene3D G3DSA:1.10.10.60 399 456 4.0E-20 T 17-10-2018 BJD13_06495 923d38b02c67b93e81fe759040ad7b49 467 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 437 444 - T 17-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BJD13_06495 923d38b02c67b93e81fe759040ad7b49 467 PIRSF PIRSF000774 1 459 4.1E-113 T 17-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BJD13_18720 47d29a3f2f264d6bec0261de190f25d5 108 Gene3D G3DSA:3.40.30.10 2 106 9.7E-16 T 17-10-2018 BJD13_18720 47d29a3f2f264d6bec0261de190f25d5 108 SUPERFAMILY SSF52833 4 105 1.75E-17 T 17-10-2018 IPR036249 Thioredoxin-like superfamily BJD13_18720 47d29a3f2f264d6bec0261de190f25d5 108 Pfam PF00085 Thioredoxin 5 104 2.6E-9 T 17-10-2018 IPR013766 Thioredoxin domain GO:0045454 BJD13_05120 bf67a65cdbee8ba77b1ec1420e265998 155 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 93 148 5.0E-13 T 17-10-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 BJD13_05120 bf67a65cdbee8ba77b1ec1420e265998 155 Gene3D G3DSA:1.10.60.10 93 153 2.7E-24 T 17-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 BJD13_05120 bf67a65cdbee8ba77b1ec1420e265998 155 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 36 90 3.9E-12 T 17-10-2018 IPR022687 DTXR-type HTH domain GO:0003677 BJD13_05120 bf67a65cdbee8ba77b1ec1420e265998 155 Gene3D G3DSA:1.10.10.10 22 92 4.6E-22 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_05120 bf67a65cdbee8ba77b1ec1420e265998 155 SUPERFAMILY SSF46785 47 121 2.99E-14 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_05120 bf67a65cdbee8ba77b1ec1420e265998 155 SMART SM00529 54 152 1.8E-31 T 17-10-2018 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 BJD13_02910 dbfebb2f970a111f2c9906695665f480 531 Pfam PF01593 Flavin containing amine oxidoreductase 19 333 1.3E-16 T 17-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 BJD13_02910 dbfebb2f970a111f2c9906695665f480 531 Gene3D G3DSA:3.50.50.60 202 365 3.9E-20 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_02910 dbfebb2f970a111f2c9906695665f480 531 SUPERFAMILY SSF51905 6 413 8.39E-52 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_02910 dbfebb2f970a111f2c9906695665f480 531 Gene3D G3DSA:3.50.50.60 8 118 1.4E-14 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_01415 ae594d9f1ab98f37534e8ede8cb58b74 234 Pfam PF11740 Plasmid replication region DNA-binding N-term 8 119 1.5E-16 T 17-10-2018 IPR021104 KfrA, N-terminal DNA-binding domain BJD13_11945 4379b5acda6286462b0603ca7931ed9f 705 SUPERFAMILY SSF54980 617 703 1.92E-28 T 17-10-2018 IPR035647 EF-G domain III/V-like BJD13_11945 4379b5acda6286462b0603ca7931ed9f 705 Pfam PF14492 Elongation Factor G, domain II 409 483 3.2E-35 T 17-10-2018 BJD13_11945 4379b5acda6286462b0603ca7931ed9f 705 SUPERFAMILY SSF54980 409 486 5.76E-26 T 17-10-2018 IPR035647 EF-G domain III/V-like BJD13_11945 4379b5acda6286462b0603ca7931ed9f 705 Gene3D G3DSA:2.40.30.10 299 405 2.2E-44 T 17-10-2018 BJD13_11945 4379b5acda6286462b0603ca7931ed9f 705 Gene3D G3DSA:3.30.70.870 410 485 2.4E-34 T 17-10-2018 BJD13_11945 4379b5acda6286462b0603ca7931ed9f 705 SMART SM00889 485 612 4.0E-68 T 17-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 BJD13_11945 4379b5acda6286462b0603ca7931ed9f 705 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 186 2.8E-32 T 17-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BJD13_11945 4379b5acda6286462b0603ca7931ed9f 705 SUPERFAMILY SSF50447 255 407 1.19E-35 T 17-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BJD13_11945 4379b5acda6286462b0603ca7931ed9f 705 Gene3D G3DSA:3.30.70.240 618 688 3.2E-83 T 17-10-2018 BJD13_11945 4379b5acda6286462b0603ca7931ed9f 705 Pfam PF00679 Elongation factor G C-terminus 614 700 8.3E-29 T 17-10-2018 IPR000640 Elongation factor EFG, domain V-like BJD13_11945 4379b5acda6286462b0603ca7931ed9f 705 SUPERFAMILY SSF52540 6 288 1.86E-107 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_11945 4379b5acda6286462b0603ca7931ed9f 705 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 17-10-2018 IPR031157 Tr-type G domain, conserved site BJD13_11945 4379b5acda6286462b0603ca7931ed9f 705 Hamap MF_00054_B Elongation factor G [fusA]. 6 705 110.518 T 17-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BJD13_11945 4379b5acda6286462b0603ca7931ed9f 705 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 2.5E-65 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD13_11945 4379b5acda6286462b0603ca7931ed9f 705 Pfam PF03144 Elongation factor Tu domain 2 329 396 1.8E-18 T 17-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 BJD13_11945 4379b5acda6286462b0603ca7931ed9f 705 Gene3D G3DSA:3.30.230.10 489 700 3.2E-83 T 17-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BJD13_11945 4379b5acda6286462b0603ca7931ed9f 705 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.8E-15 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD13_11945 4379b5acda6286462b0603ca7931ed9f 705 PRINTS PR00315 GTP-binding elongation factor signature 85 95 1.8E-15 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD13_11945 4379b5acda6286462b0603ca7931ed9f 705 PRINTS PR00315 GTP-binding elongation factor signature 101 112 1.8E-15 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD13_11945 4379b5acda6286462b0603ca7931ed9f 705 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.8E-15 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD13_11945 4379b5acda6286462b0603ca7931ed9f 705 PRINTS PR00315 GTP-binding elongation factor signature 137 146 1.8E-15 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD13_11945 4379b5acda6286462b0603ca7931ed9f 705 Gene3D G3DSA:3.40.50.300 1 298 2.3E-115 T 17-10-2018 BJD13_11945 4379b5acda6286462b0603ca7931ed9f 705 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 704 0.0 T 17-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BJD13_11945 4379b5acda6286462b0603ca7931ed9f 705 Pfam PF03764 Elongation factor G, domain IV 484 612 2.6E-42 T 17-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 BJD13_11945 4379b5acda6286462b0603ca7931ed9f 705 SUPERFAMILY SSF54211 484 613 9.36E-40 T 17-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BJD13_11945 4379b5acda6286462b0603ca7931ed9f 705 SMART SM00838 614 701 4.3E-54 T 17-10-2018 IPR000640 Elongation factor EFG, domain V-like BJD13_01890 434a1eaf7c25586936c167ff7e30e8b1 285 Gene3D G3DSA:2.60.120.10 13 116 1.5E-19 T 17-10-2018 IPR014710 RmlC-like jelly roll fold BJD13_01890 434a1eaf7c25586936c167ff7e30e8b1 285 Gene3D G3DSA:2.60.120.10 153 209 1.4E-5 T 17-10-2018 IPR014710 RmlC-like jelly roll fold BJD13_01890 434a1eaf7c25586936c167ff7e30e8b1 285 SUPERFAMILY SSF51182 170 283 1.25E-21 T 17-10-2018 IPR011051 RmlC-like cupin domain superfamily BJD13_01890 434a1eaf7c25586936c167ff7e30e8b1 285 SUPERFAMILY SSF51182 8 81 2.22E-21 T 17-10-2018 IPR011051 RmlC-like cupin domain superfamily BJD13_01890 434a1eaf7c25586936c167ff7e30e8b1 285 Pfam PF05962 HutD 169 278 2.1E-18 T 17-10-2018 IPR010282 Uncharacterised protein family HutD/Ves BJD13_01890 434a1eaf7c25586936c167ff7e30e8b1 285 Pfam PF05962 HutD 14 98 5.9E-24 T 17-10-2018 IPR010282 Uncharacterised protein family HutD/Ves BJD13_17425 1bb146cfe455981820ad8b499fd5729b 486 SUPERFAMILY SSF56954 4 475 4.32E-89 T 17-10-2018 BJD13_17425 1bb146cfe455981820ad8b499fd5729b 486 Gene3D G3DSA:2.20.200.10 109 362 3.5E-112 T 17-10-2018 BJD13_17425 1bb146cfe455981820ad8b499fd5729b 486 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 14 472 4.3E-88 T 17-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 BJD13_17425 1bb146cfe455981820ad8b499fd5729b 486 Pfam PF02321 Outer membrane efflux protein 72 262 1.1E-15 T 17-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 BJD13_17425 1bb146cfe455981820ad8b499fd5729b 486 Pfam PF02321 Outer membrane efflux protein 293 470 8.5E-24 T 17-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 BJD13_17425 1bb146cfe455981820ad8b499fd5729b 486 Gene3D G3DSA:1.20.1600.10 62 473 3.5E-112 T 17-10-2018 BJD13_14615 dcc4c3c53fb4cf8578bb53292ac7ac4d 371 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 179 289 9.1E-16 T 17-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BJD13_14615 dcc4c3c53fb4cf8578bb53292ac7ac4d 371 Gene3D G3DSA:3.10.180.10 174 371 2.6E-66 T 17-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD13_14615 dcc4c3c53fb4cf8578bb53292ac7ac4d 371 SUPERFAMILY SSF54593 16 358 5.64E-72 T 17-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD13_14615 dcc4c3c53fb4cf8578bb53292ac7ac4d 371 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 21 162 1.2E-60 T 17-10-2018 BJD13_14615 dcc4c3c53fb4cf8578bb53292ac7ac4d 371 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 29 371 2.4E-114 T 17-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 BJD13_14615 dcc4c3c53fb4cf8578bb53292ac7ac4d 371 PIRSF PIRSF009283 12 371 1.9E-126 T 17-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 BJD13_14615 dcc4c3c53fb4cf8578bb53292ac7ac4d 371 Gene3D G3DSA:3.10.180.10 18 173 7.0E-42 T 17-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD13_22550 ee8d5fdc9ff39353722c414a79a98c5c 447 Pfam PF03080 Neprosin 204 443 2.0E-44 T 17-10-2018 IPR004314 Neprosin BJD13_07130 707f60141fb7089313b8a0ae735abbcf 413 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 15 328 6.8E-37 T 17-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 BJD13_07130 707f60141fb7089313b8a0ae735abbcf 413 Gene3D G3DSA:3.40.50.720 111 299 1.1E-105 T 17-10-2018 BJD13_07130 707f60141fb7089313b8a0ae735abbcf 413 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 121 296 4.3E-52 T 17-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 BJD13_07130 707f60141fb7089313b8a0ae735abbcf 413 SUPERFAMILY SSF55021 336 412 1.11E-15 T 17-10-2018 BJD13_07130 707f60141fb7089313b8a0ae735abbcf 413 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 202 224 - T 17-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site BJD13_07130 707f60141fb7089313b8a0ae735abbcf 413 Gene3D G3DSA:3.40.50.720 16 314 1.1E-105 T 17-10-2018 BJD13_07130 707f60141fb7089313b8a0ae735abbcf 413 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 156 183 - T 17-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 BJD13_07130 707f60141fb7089313b8a0ae735abbcf 413 SUPERFAMILY SSF52283 10 137 4.25E-47 T 17-10-2018 BJD13_07130 707f60141fb7089313b8a0ae735abbcf 413 Gene3D G3DSA:3.30.70.260 330 412 1.4E-28 T 17-10-2018 BJD13_07130 707f60141fb7089313b8a0ae735abbcf 413 SUPERFAMILY SSF51735 110 297 6.11E-57 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_09890 895c42ffb1b7e57603ea9d6441c2c9ac 340 SUPERFAMILY SSF56281 19 329 1.72E-59 T 17-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BJD13_09890 895c42ffb1b7e57603ea9d6441c2c9ac 340 TIGRFAM TIGR04122 Xnuc_lig_assoc: putative exonuclease, DNA ligase-associated 16 339 6.6E-146 T 17-10-2018 IPR026360 Putative exonuclease, DNA ligase-associated BJD13_09890 895c42ffb1b7e57603ea9d6441c2c9ac 340 Gene3D G3DSA:3.60.15.10 26 203 2.4E-17 T 17-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BJD13_10570 af1d5eae6835f2aaf55d17abc0b16ac7 555 Pfam PF08019 Domain of unknown function (DUF1705) 68 216 8.9E-47 T 17-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 BJD13_10570 af1d5eae6835f2aaf55d17abc0b16ac7 555 SUPERFAMILY SSF53649 244 539 2.83E-19 T 17-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 BJD13_10570 af1d5eae6835f2aaf55d17abc0b16ac7 555 Gene3D G3DSA:3.40.720.10 225 552 2.8E-84 T 17-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 BJD13_10570 af1d5eae6835f2aaf55d17abc0b16ac7 555 Pfam PF00884 Sulfatase 247 533 1.7E-48 T 17-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 BJD13_21565 fbe8c11ba93ea675390eebfea735e11e 1509 SUPERFAMILY SSF48452 408 568 2.32E-9 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_21565 fbe8c11ba93ea675390eebfea735e11e 1509 Gene3D G3DSA:1.25.40.10 358 570 2.6E-22 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_21565 fbe8c11ba93ea675390eebfea735e11e 1509 Pfam PF14559 Tetratricopeptide repeat 401 456 1.5E-7 T 17-10-2018 BJD13_21565 fbe8c11ba93ea675390eebfea735e11e 1509 Pfam PF14559 Tetratricopeptide repeat 44 106 7.2E-8 T 17-10-2018 BJD13_21565 fbe8c11ba93ea675390eebfea735e11e 1509 Pfam PF14559 Tetratricopeptide repeat 476 543 4.0E-8 T 17-10-2018 BJD13_21565 fbe8c11ba93ea675390eebfea735e11e 1509 SUPERFAMILY SSF48452 701 818 1.28E-16 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_21565 fbe8c11ba93ea675390eebfea735e11e 1509 Pfam PF13432 Tetratricopeptide repeat 290 338 0.001 T 17-10-2018 BJD13_21565 fbe8c11ba93ea675390eebfea735e11e 1509 Pfam PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) 1005 1488 3.6E-103 T 17-10-2018 IPR008410 Cellulose synthase operon C, C-terminal GO:0019867|GO:0030244 BJD13_21565 fbe8c11ba93ea675390eebfea735e11e 1509 Gene3D G3DSA:1.25.40.10 571 840 1.2E-24 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_21565 fbe8c11ba93ea675390eebfea735e11e 1509 PRINTS PR01441 Cellulose synthase subunit C signature 744 772 5.1E-13 T 17-10-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 BJD13_21565 fbe8c11ba93ea675390eebfea735e11e 1509 PRINTS PR01441 Cellulose synthase subunit C signature 154 166 5.1E-13 T 17-10-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 BJD13_21565 fbe8c11ba93ea675390eebfea735e11e 1509 PRINTS PR01441 Cellulose synthase subunit C signature 184 201 5.1E-13 T 17-10-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 BJD13_21565 fbe8c11ba93ea675390eebfea735e11e 1509 PRINTS PR01441 Cellulose synthase subunit C signature 498 518 5.1E-13 T 17-10-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 BJD13_21565 fbe8c11ba93ea675390eebfea735e11e 1509 Pfam PF04733 Coatomer epsilon subunit 731 814 1.1E-4 T 17-10-2018 BJD13_21565 fbe8c11ba93ea675390eebfea735e11e 1509 SMART SM00028 726 759 0.44 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD13_21565 fbe8c11ba93ea675390eebfea735e11e 1509 SMART SM00028 32 65 10.0 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD13_21565 fbe8c11ba93ea675390eebfea735e11e 1509 SMART SM00028 390 422 370.0 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD13_21565 fbe8c11ba93ea675390eebfea735e11e 1509 SMART SM00028 356 389 18.0 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD13_21565 fbe8c11ba93ea675390eebfea735e11e 1509 SMART SM00028 760 793 17.0 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD13_21565 fbe8c11ba93ea675390eebfea735e11e 1509 SMART SM00028 66 99 310.0 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD13_21565 fbe8c11ba93ea675390eebfea735e11e 1509 SMART SM00028 314 347 310.0 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD13_21565 fbe8c11ba93ea675390eebfea735e11e 1509 SMART SM00028 794 827 2.3 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD13_21565 fbe8c11ba93ea675390eebfea735e11e 1509 Gene3D G3DSA:1.25.40.10 263 356 8.9E-6 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_21565 fbe8c11ba93ea675390eebfea735e11e 1509 SUPERFAMILY SSF48452 34 199 2.51E-9 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_21565 fbe8c11ba93ea675390eebfea735e11e 1509 Gene3D G3DSA:1.25.40.10 24 219 9.0E-13 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_21565 fbe8c11ba93ea675390eebfea735e11e 1509 SUPERFAMILY SSF48452 283 449 3.26E-14 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_23760 cb59ce0ddba8b0c39592b1c95f65b833 1175 SUPERFAMILY SSF52172 1049 1166 7.97E-32 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_23760 cb59ce0ddba8b0c39592b1c95f65b833 1175 Gene3D G3DSA:2.130.10.10 128 244 2.7E-19 T 17-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BJD13_23760 cb59ce0ddba8b0c39592b1c95f65b833 1175 Gene3D G3DSA:2.130.10.10 475 644 4.7E-11 T 17-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BJD13_23760 cb59ce0ddba8b0c39592b1c95f65b833 1175 Gene3D G3DSA:2.60.40.10 645 759 2.3E-17 T 17-10-2018 IPR013783 Immunoglobulin-like fold BJD13_23760 cb59ce0ddba8b0c39592b1c95f65b833 1175 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 919 1030 2.4E-28 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_23760 cb59ce0ddba8b0c39592b1c95f65b833 1175 Gene3D G3DSA:1.10.287.130 780 870 1.4E-23 T 17-10-2018 BJD13_23760 cb59ce0ddba8b0c39592b1c95f65b833 1175 SMART SM00388 807 872 5.3E-22 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_23760 cb59ce0ddba8b0c39592b1c95f65b833 1175 SUPERFAMILY SSF55874 861 1029 7.07E-45 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_23760 cb59ce0ddba8b0c39592b1c95f65b833 1175 SMART SM00387 919 1031 2.1E-37 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_23760 cb59ce0ddba8b0c39592b1c95f65b833 1175 Pfam PF07495 Y_Y_Y domain 691 745 1.7E-13 T 17-10-2018 IPR011123 Two component regulator three Y BJD13_23760 cb59ce0ddba8b0c39592b1c95f65b833 1175 Pfam PF00072 Response regulator receiver domain 1053 1162 3.7E-21 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_23760 cb59ce0ddba8b0c39592b1c95f65b833 1175 Gene3D G3DSA:2.130.10.10 260 447 1.2E-14 T 17-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BJD13_23760 cb59ce0ddba8b0c39592b1c95f65b833 1175 PRINTS PR00344 Bacterial sensor protein C-terminal signature 991 1009 3.3E-13 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_23760 cb59ce0ddba8b0c39592b1c95f65b833 1175 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1015 1028 3.3E-13 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_23760 cb59ce0ddba8b0c39592b1c95f65b833 1175 PRINTS PR00344 Bacterial sensor protein C-terminal signature 955 969 3.3E-13 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_23760 cb59ce0ddba8b0c39592b1c95f65b833 1175 PRINTS PR00344 Bacterial sensor protein C-terminal signature 973 983 3.3E-13 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_23760 cb59ce0ddba8b0c39592b1c95f65b833 1175 SUPERFAMILY SSF63829 398 630 5.56E-19 T 17-10-2018 BJD13_23760 cb59ce0ddba8b0c39592b1c95f65b833 1175 Gene3D G3DSA:2.130.10.10 28 127 4.5E-17 T 17-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BJD13_23760 cb59ce0ddba8b0c39592b1c95f65b833 1175 SMART SM00448 1051 1162 2.0E-29 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_23760 cb59ce0ddba8b0c39592b1c95f65b833 1175 SUPERFAMILY SSF47384 795 873 5.3E-18 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD13_23760 cb59ce0ddba8b0c39592b1c95f65b833 1175 Gene3D G3DSA:3.40.50.2300 1037 1173 7.0E-31 T 17-10-2018 BJD13_23760 cb59ce0ddba8b0c39592b1c95f65b833 1175 Pfam PF07494 Two component regulator propeller 39 62 0.013 T 17-10-2018 IPR011110 Two component regulator propeller BJD13_23760 cb59ce0ddba8b0c39592b1c95f65b833 1175 Pfam PF07494 Two component regulator propeller 174 196 2.0E-4 T 17-10-2018 IPR011110 Two component regulator propeller BJD13_23760 cb59ce0ddba8b0c39592b1c95f65b833 1175 SUPERFAMILY SSF63829 40 263 9.81E-10 T 17-10-2018 BJD13_23760 cb59ce0ddba8b0c39592b1c95f65b833 1175 Pfam PF00512 His Kinase A (phospho-acceptor) domain 807 872 8.6E-16 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_23760 cb59ce0ddba8b0c39592b1c95f65b833 1175 Gene3D G3DSA:3.30.565.10 871 1034 1.9E-44 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_01275 736c010e8c5c56df94bcdcc42ba1c38c 254 SUPERFAMILY SSF53098 72 192 1.29E-5 T 17-10-2018 IPR012337 Ribonuclease H-like superfamily BJD13_01275 736c010e8c5c56df94bcdcc42ba1c38c 254 Pfam PF13610 DDE domain 73 211 3.9E-50 T 17-10-2018 IPR032874 DDE domain BJD13_01135 736c010e8c5c56df94bcdcc42ba1c38c 254 SUPERFAMILY SSF53098 72 192 1.29E-5 T 17-10-2018 IPR012337 Ribonuclease H-like superfamily BJD13_01135 736c010e8c5c56df94bcdcc42ba1c38c 254 Pfam PF13610 DDE domain 73 211 3.9E-50 T 17-10-2018 IPR032874 DDE domain BJD13_10690 324c9293ac33fb6bb43874c8348462b7 656 TIGRFAM TIGR00733 TIGR00733: oligopeptide transporter, OPT family 10 612 1.1E-178 T 17-10-2018 IPR004814 Oligopeptide transporter OPT BJD13_10690 324c9293ac33fb6bb43874c8348462b7 656 Pfam PF03169 OPT oligopeptide transporter protein 9 611 2.1E-128 T 17-10-2018 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 BJD13_10690 324c9293ac33fb6bb43874c8348462b7 656 TIGRFAM TIGR00728 OPT_sfam: oligopeptide transporter, OPT superfamily 4 608 5.5E-87 T 17-10-2018 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 BJD13_08005 f10bef7da3756ff62b3f369b7a66397b 430 Gene3D G3DSA:3.30.390.10 1 126 3.2E-53 T 17-10-2018 IPR029017 Enolase-like, N-terminal BJD13_08005 f10bef7da3756ff62b3f369b7a66397b 430 SUPERFAMILY SSF51604 142 426 4.32E-127 T 17-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily BJD13_08005 f10bef7da3756ff62b3f369b7a66397b 430 PRINTS PR00148 Enolase signature 365 382 2.9E-45 T 17-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BJD13_08005 f10bef7da3756ff62b3f369b7a66397b 430 PRINTS PR00148 Enolase signature 37 51 2.9E-45 T 17-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BJD13_08005 f10bef7da3756ff62b3f369b7a66397b 430 PRINTS PR00148 Enolase signature 107 123 2.9E-45 T 17-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BJD13_08005 f10bef7da3756ff62b3f369b7a66397b 430 PRINTS PR00148 Enolase signature 313 324 2.9E-45 T 17-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BJD13_08005 f10bef7da3756ff62b3f369b7a66397b 430 PRINTS PR00148 Enolase signature 336 350 2.9E-45 T 17-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BJD13_08005 f10bef7da3756ff62b3f369b7a66397b 430 PRINTS PR00148 Enolase signature 163 176 2.9E-45 T 17-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BJD13_08005 f10bef7da3756ff62b3f369b7a66397b 430 PIRSF PIRSF001400 1 427 1.3E-185 T 17-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BJD13_08005 f10bef7da3756ff62b3f369b7a66397b 430 Pfam PF03952 Enolase, N-terminal domain 4 134 3.1E-56 T 17-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BJD13_08005 f10bef7da3756ff62b3f369b7a66397b 430 Hamap MF_00318 Enolase [eno]. 2 413 44.183 T 17-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BJD13_08005 f10bef7da3756ff62b3f369b7a66397b 430 Pfam PF00113 Enolase, C-terminal TIM barrel domain 142 425 8.1E-133 T 17-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BJD13_08005 f10bef7da3756ff62b3f369b7a66397b 430 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 427 2.1E-201 T 17-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BJD13_08005 f10bef7da3756ff62b3f369b7a66397b 430 ProSitePatterns PS00164 Enolase signature. 336 349 - T 17-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD13_08005 f10bef7da3756ff62b3f369b7a66397b 430 SMART SM01193 4 134 2.1E-89 T 17-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BJD13_08005 f10bef7da3756ff62b3f369b7a66397b 430 SUPERFAMILY SSF54826 4 136 1.04E-53 T 17-10-2018 BJD13_08005 f10bef7da3756ff62b3f369b7a66397b 430 SMART SM01192 141 427 3.3E-219 T 17-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BJD13_08005 f10bef7da3756ff62b3f369b7a66397b 430 Gene3D G3DSA:3.20.20.120 129 430 8.6E-133 T 17-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily BJD13_12195 a6e18ee877fd81f16fd96f2a6f3bae4c 365 SMART SM01002 148 310 1.5E-75 T 17-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain BJD13_12195 a6e18ee877fd81f16fd96f2a6f3bae4c 365 SUPERFAMILY SSF51735 139 314 1.86E-38 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_12195 a6e18ee877fd81f16fd96f2a6f3bae4c 365 Gene3D G3DSA:3.40.50.720 139 317 1.3E-128 T 17-10-2018 BJD13_12195 a6e18ee877fd81f16fd96f2a6f3bae4c 365 Gene3D G3DSA:3.40.50.720 7 355 1.3E-128 T 17-10-2018 BJD13_12195 a6e18ee877fd81f16fd96f2a6f3bae4c 365 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 143 354 6.0E-62 T 17-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain BJD13_12195 a6e18ee877fd81f16fd96f2a6f3bae4c 365 SMART SM01003 6 139 3.3E-54 T 17-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal BJD13_12195 a6e18ee877fd81f16fd96f2a6f3bae4c 365 SUPERFAMILY SSF52283 5 170 2.89E-44 T 17-10-2018 BJD13_12195 a6e18ee877fd81f16fd96f2a6f3bae4c 365 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 7 139 1.2E-36 T 17-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal BJD13_12195 a6e18ee877fd81f16fd96f2a6f3bae4c 365 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 172 197 - T 17-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 BJD13_11955 a09ae44c6472ef6fda23e557910517a0 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 8.7E-68 T 17-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_11955 a09ae44c6472ef6fda23e557910517a0 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.549 T 17-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_11955 a09ae44c6472ef6fda23e557910517a0 124 Gene3D G3DSA:2.40.50.140 1 124 2.3E-61 T 17-10-2018 BJD13_11955 a09ae44c6472ef6fda23e557910517a0 124 PIRSF PIRSF002133 1 124 1.2E-54 T 17-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_11955 a09ae44c6472ef6fda23e557910517a0 124 SUPERFAMILY SSF50249 3 123 5.31E-50 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD13_11955 a09ae44c6472ef6fda23e557910517a0 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 17-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_11955 a09ae44c6472ef6fda23e557910517a0 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 6.2E-59 T 17-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_11955 a09ae44c6472ef6fda23e557910517a0 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 6.2E-59 T 17-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_11955 a09ae44c6472ef6fda23e557910517a0 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 6.2E-59 T 17-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_11955 a09ae44c6472ef6fda23e557910517a0 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 6.2E-59 T 17-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_11955 a09ae44c6472ef6fda23e557910517a0 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 6.2E-59 T 17-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_11955 a09ae44c6472ef6fda23e557910517a0 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 6.2E-59 T 17-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_11955 a09ae44c6472ef6fda23e557910517a0 124 Pfam PF00164 Ribosomal protein S12/S23 12 123 1.2E-40 T 17-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_01835 51bee4716939d41cc369732c917b852f 222 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 9 195 4.9E-63 T 17-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 BJD13_01835 51bee4716939d41cc369732c917b852f 222 Pfam PF00551 Formyl transferase 9 184 9.4E-52 T 17-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BJD13_01835 51bee4716939d41cc369732c917b852f 222 SUPERFAMILY SSF53328 8 203 1.7E-58 T 17-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BJD13_01835 51bee4716939d41cc369732c917b852f 222 Gene3D G3DSA:3.40.50.170 2 208 1.1E-70 T 17-10-2018 BJD13_01835 51bee4716939d41cc369732c917b852f 222 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 9 192 28.178 T 17-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 BJD13_19835 83b0684b02d58dca48c5ecb64f8767c4 740 SUPERFAMILY SSF52540 464 613 2.84E-21 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_19835 83b0684b02d58dca48c5ecb64f8767c4 740 Pfam PF00270 DEAD/DEAH box helicase 207 362 3.4E-13 T 17-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BJD13_19835 83b0684b02d58dca48c5ecb64f8767c4 740 SMART SM00490 496 592 1.3E-10 T 17-10-2018 IPR001650 Helicase, C-terminal BJD13_19835 83b0684b02d58dca48c5ecb64f8767c4 740 SMART SM00487 195 391 2.0E-21 T 17-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BJD13_19835 83b0684b02d58dca48c5ecb64f8767c4 740 SUPERFAMILY SSF52540 196 375 3.46E-41 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_19835 83b0684b02d58dca48c5ecb64f8767c4 740 TIGRFAM TIGR00595 priA: primosomal protein N' 220 737 5.0E-173 T 17-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 BJD13_19835 83b0684b02d58dca48c5ecb64f8767c4 740 Pfam PF00271 Helicase conserved C-terminal domain 498 591 1.2E-6 T 17-10-2018 IPR001650 Helicase, C-terminal BJD13_19835 83b0684b02d58dca48c5ecb64f8767c4 740 Gene3D G3DSA:1.10.8.630 6 118 1.4E-28 T 17-10-2018 BJD13_19835 83b0684b02d58dca48c5ecb64f8767c4 740 Hamap MF_00983 Probable primosomal protein N' [priA]. 10 739 23.582 T 17-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 BJD13_19835 83b0684b02d58dca48c5ecb64f8767c4 740 Gene3D G3DSA:3.40.50.300 192 378 6.5E-74 T 17-10-2018 BJD13_03045 af91cd59d88efe90682a59b8a540d4f1 222 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 11 211 9.3E-41 T 17-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 BJD13_03045 af91cd59d88efe90682a59b8a540d4f1 222 SUPERFAMILY SSF51366 8 214 2.35E-53 T 17-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 BJD13_03045 af91cd59d88efe90682a59b8a540d4f1 222 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 8 216 39.117 T 17-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 BJD13_03045 af91cd59d88efe90682a59b8a540d4f1 222 Gene3D G3DSA:3.20.20.70 8 219 6.0E-60 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD13_07235 4b9fee81b1e29fb87a91ea60af4c434b 434 Gene3D G3DSA:3.40.50.1100 89 399 4.8E-122 T 17-10-2018 BJD13_07235 4b9fee81b1e29fb87a91ea60af4c434b 434 Gene3D G3DSA:3.40.50.1100 99 405 4.8E-122 T 17-10-2018 BJD13_07235 4b9fee81b1e29fb87a91ea60af4c434b 434 Pfam PF14821 Threonine synthase N terminus 2 75 2.3E-13 T 17-10-2018 IPR029144 Threonine synthase, N-terminal BJD13_07235 4b9fee81b1e29fb87a91ea60af4c434b 434 SUPERFAMILY SSF53686 2 430 8.12E-122 T 17-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BJD13_07235 4b9fee81b1e29fb87a91ea60af4c434b 434 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 93 107 - T 17-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 BJD13_07235 4b9fee81b1e29fb87a91ea60af4c434b 434 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 93 370 6.9E-21 T 17-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme BJD13_07235 4b9fee81b1e29fb87a91ea60af4c434b 434 Gene3D G3DSA:3.90.1380.10 1 79 6.5E-16 T 17-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily BJD13_07235 4b9fee81b1e29fb87a91ea60af4c434b 434 TIGRFAM TIGR00260 thrC: threonine synthase 67 397 2.1E-70 T 17-10-2018 IPR004450 Threonine synthase-like BJD13_15075 a6b5cd8a6455556a557718a37e80b08c 286 SUPERFAMILY SSF46785 43 112 1.95E-10 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_15075 a6b5cd8a6455556a557718a37e80b08c 286 SUPERFAMILY SSF55781 111 285 4.46E-49 T 17-10-2018 BJD13_15075 a6b5cd8a6455556a557718a37e80b08c 286 Pfam PF09339 IclR helix-turn-helix domain 44 92 3.5E-12 T 17-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 BJD13_15075 a6b5cd8a6455556a557718a37e80b08c 286 TIGRFAM TIGR02431 pcaR_pcaU: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family 39 284 4.5E-94 T 17-10-2018 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR GO:0003677|GO:0045893|GO:0046278 BJD13_15075 a6b5cd8a6455556a557718a37e80b08c 286 Gene3D G3DSA:1.10.10.10 34 110 1.1E-17 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_15075 a6b5cd8a6455556a557718a37e80b08c 286 Gene3D G3DSA:3.30.450.40 111 286 2.7E-56 T 17-10-2018 IPR029016 GAF-like domain superfamily BJD13_15075 a6b5cd8a6455556a557718a37e80b08c 286 Pfam PF01614 Bacterial transcriptional regulator 158 281 1.6E-36 T 17-10-2018 IPR014757 Transcription regulator IclR, C-terminal BJD13_15075 a6b5cd8a6455556a557718a37e80b08c 286 SMART SM00346 42 130 1.4E-18 T 17-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 BJD13_07245 4d8cd81c9df68fc5e237857177a3ba09 322 Pfam PF08544 GHMP kinases C terminal 225 299 4.0E-11 T 17-10-2018 IPR013750 GHMP kinase, C-terminal domain BJD13_07245 4d8cd81c9df68fc5e237857177a3ba09 322 Hamap MF_00384 Homoserine kinase [thrB]. 22 321 25.704 T 17-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 BJD13_07245 4d8cd81c9df68fc5e237857177a3ba09 322 PRINTS PR00958 Homoserine kinase signature 27 42 2.5E-22 T 17-10-2018 BJD13_07245 4d8cd81c9df68fc5e237857177a3ba09 322 PRINTS PR00958 Homoserine kinase signature 112 127 2.5E-22 T 17-10-2018 BJD13_07245 4d8cd81c9df68fc5e237857177a3ba09 322 PRINTS PR00958 Homoserine kinase signature 152 165 2.5E-22 T 17-10-2018 BJD13_07245 4d8cd81c9df68fc5e237857177a3ba09 322 PRINTS PR00958 Homoserine kinase signature 187 204 2.5E-22 T 17-10-2018 BJD13_07245 4d8cd81c9df68fc5e237857177a3ba09 322 PRINTS PR00958 Homoserine kinase signature 266 281 2.5E-22 T 17-10-2018 BJD13_07245 4d8cd81c9df68fc5e237857177a3ba09 322 Pfam PF00288 GHMP kinases N terminal domain 99 164 3.0E-9 T 17-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 BJD13_07245 4d8cd81c9df68fc5e237857177a3ba09 322 PIRSF PIRSF000676 17 321 8.1E-77 T 17-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 BJD13_07245 4d8cd81c9df68fc5e237857177a3ba09 322 Gene3D G3DSA:3.30.230.10 15 177 1.6E-40 T 17-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BJD13_07245 4d8cd81c9df68fc5e237857177a3ba09 322 SUPERFAMILY SSF54211 21 177 2.35E-26 T 17-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BJD13_07245 4d8cd81c9df68fc5e237857177a3ba09 322 Gene3D G3DSA:3.30.70.890 178 312 1.2E-32 T 17-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily BJD13_07245 4d8cd81c9df68fc5e237857177a3ba09 322 SUPERFAMILY SSF55060 186 294 2.88E-24 T 17-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily BJD13_10470 c1ff4ace0fa5fcfa94988887b7f3369d 400 SUPERFAMILY SSF51246 325 396 1.13E-14 T 17-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 BJD13_10470 c1ff4ace0fa5fcfa94988887b7f3369d 400 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 14 397 1.1E-176 T 17-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 BJD13_10470 c1ff4ace0fa5fcfa94988887b7f3369d 400 Hamap MF_01643 Formate-dependent phosphoribosylglycinamide formyltransferase [purT]. 8 397 51.588 T 17-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 BJD13_10470 c1ff4ace0fa5fcfa94988887b7f3369d 400 Gene3D G3DSA:3.30.470.20 198 400 2.3E-58 T 17-10-2018 BJD13_10470 c1ff4ace0fa5fcfa94988887b7f3369d 400 Gene3D G3DSA:3.40.50.20 2 123 2.5E-52 T 17-10-2018 BJD13_10470 c1ff4ace0fa5fcfa94988887b7f3369d 400 Gene3D G3DSA:3.30.1490.20 124 197 1.2E-31 T 17-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BJD13_10470 c1ff4ace0fa5fcfa94988887b7f3369d 400 SUPERFAMILY SSF52440 3 113 1.28E-32 T 17-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BJD13_10470 c1ff4ace0fa5fcfa94988887b7f3369d 400 Pfam PF02222 ATP-grasp domain 124 295 6.1E-56 T 17-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type BJD13_10470 c1ff4ace0fa5fcfa94988887b7f3369d 400 SUPERFAMILY SSF56059 114 314 3.71E-58 T 17-10-2018 BJD13_19715 b328924edef082a9df6429d0785ac8a1 414 Gene3D G3DSA:2.40.50.100 74 216 4.5E-87 T 17-10-2018 BJD13_19715 b328924edef082a9df6429d0785ac8a1 414 Gene3D G3DSA:2.40.420.20 306 375 4.5E-87 T 17-10-2018 BJD13_19715 b328924edef082a9df6429d0785ac8a1 414 Gene3D G3DSA:1.10.287.470 109 182 4.5E-87 T 17-10-2018 BJD13_19715 b328924edef082a9df6429d0785ac8a1 414 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 50 377 2.3E-83 T 17-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 BJD13_19715 b328924edef082a9df6429d0785ac8a1 414 Gene3D G3DSA:2.40.30.170 61 305 4.5E-87 T 17-10-2018 BJD13_19715 b328924edef082a9df6429d0785ac8a1 414 SUPERFAMILY SSF111369 64 300 4.18E-57 T 17-10-2018 BJD13_19715 b328924edef082a9df6429d0785ac8a1 414 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 74 295 2.4E-20 T 17-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BJD13_13545 7318e02d3f45bdb130f0fc2d2a1bf5e1 84 Pfam PF13627 Prokaryotic lipoprotein-attachment site 11 33 5.5E-7 T 17-10-2018 IPR032831 Prokaryotic lipoprotein-attachment site BJD13_21080 214d54fecff510ee8d8e2c19312fd989 117 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 3 94 1.0E-32 T 17-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 BJD13_21080 214d54fecff510ee8d8e2c19312fd989 117 PIRSF PIRSF006113 1 117 1.5E-48 T 17-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 BJD13_21080 214d54fecff510ee8d8e2c19312fd989 117 SUPERFAMILY SSF55620 3 117 1.22E-39 T 17-10-2018 BJD13_21080 214d54fecff510ee8d8e2c19312fd989 117 Gene3D G3DSA:3.30.479.10 1 117 5.5E-47 T 17-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 BJD13_21080 214d54fecff510ee8d8e2c19312fd989 117 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 3 116 2.4E-35 T 17-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 BJD13_18995 c6642f9b97f77dc019d151ce91a8789f 226 Hamap MF_00165 Thymidylate kinase [tmk]. 10 200 21.795 T 17-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 BJD13_18995 c6642f9b97f77dc019d151ce91a8789f 226 SUPERFAMILY SSF52540 9 199 8.13E-38 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_18995 c6642f9b97f77dc019d151ce91a8789f 226 Gene3D G3DSA:3.40.50.300 7 201 1.8E-47 T 17-10-2018 BJD13_18995 c6642f9b97f77dc019d151ce91a8789f 226 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 9 188 3.7E-40 T 17-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 BJD13_18995 c6642f9b97f77dc019d151ce91a8789f 226 Pfam PF02223 Thymidylate kinase 14 188 2.9E-39 T 17-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 BJD13_01305 b082bafc2d5bc2f6c856939e5782f8a5 280 Pfam PF12852 Cupin 3 155 3.6E-27 T 17-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain BJD13_01305 b082bafc2d5bc2f6c856939e5782f8a5 280 SMART SM00342 186 268 1.1E-24 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD13_01305 b082bafc2d5bc2f6c856939e5782f8a5 280 SUPERFAMILY SSF51215 19 151 5.62E-6 T 17-10-2018 IPR037923 Transcription regulator HTH-like BJD13_01305 b082bafc2d5bc2f6c856939e5782f8a5 280 Gene3D G3DSA:1.10.10.60 166 273 7.5E-23 T 17-10-2018 BJD13_01305 b082bafc2d5bc2f6c856939e5782f8a5 280 SUPERFAMILY SSF46689 222 270 6.72E-7 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_01305 b082bafc2d5bc2f6c856939e5782f8a5 280 SUPERFAMILY SSF46689 169 219 8.97E-10 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_01305 b082bafc2d5bc2f6c856939e5782f8a5 280 Pfam PF12833 Helix-turn-helix domain 192 269 6.1E-18 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD13_01165 b082bafc2d5bc2f6c856939e5782f8a5 280 Pfam PF12852 Cupin 3 155 3.6E-27 T 17-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain BJD13_01165 b082bafc2d5bc2f6c856939e5782f8a5 280 SMART SM00342 186 268 1.1E-24 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD13_01165 b082bafc2d5bc2f6c856939e5782f8a5 280 SUPERFAMILY SSF51215 19 151 5.62E-6 T 17-10-2018 IPR037923 Transcription regulator HTH-like BJD13_01165 b082bafc2d5bc2f6c856939e5782f8a5 280 Gene3D G3DSA:1.10.10.60 166 273 7.5E-23 T 17-10-2018 BJD13_01165 b082bafc2d5bc2f6c856939e5782f8a5 280 SUPERFAMILY SSF46689 222 270 6.72E-7 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_01165 b082bafc2d5bc2f6c856939e5782f8a5 280 SUPERFAMILY SSF46689 169 219 8.97E-10 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_01165 b082bafc2d5bc2f6c856939e5782f8a5 280 Pfam PF12833 Helix-turn-helix domain 192 269 6.1E-18 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD13_08955 75fa17b19ac51d659fd232218ccfd280 942 PIRSF PIRSF000157 2 934 0.0 T 17-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 BJD13_08955 75fa17b19ac51d659fd232218ccfd280 942 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 14 932 0.0 T 17-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 BJD13_08955 75fa17b19ac51d659fd232218ccfd280 942 SUPERFAMILY SSF52518 577 794 8.41E-53 T 17-10-2018 IPR029061 Thiamin diphosphate-binding fold BJD13_08955 75fa17b19ac51d659fd232218ccfd280 942 Gene3D G3DSA:3.40.50.11610 724 929 4.7E-165 T 17-10-2018 BJD13_08955 75fa17b19ac51d659fd232218ccfd280 942 SUPERFAMILY SSF52518 117 547 1.82E-86 T 17-10-2018 IPR029061 Thiamin diphosphate-binding fold BJD13_08955 75fa17b19ac51d659fd232218ccfd280 942 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 791 932 9.8E-52 T 17-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 BJD13_08955 75fa17b19ac51d659fd232218ccfd280 942 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 11 49 1.3E-15 T 17-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 BJD13_08955 75fa17b19ac51d659fd232218ccfd280 942 Gene3D G3DSA:3.40.50.12470 557 803 4.7E-165 T 17-10-2018 BJD13_08955 75fa17b19ac51d659fd232218ccfd280 942 SMART SM00861 594 787 9.2E-53 T 17-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BJD13_08955 75fa17b19ac51d659fd232218ccfd280 942 Pfam PF00676 Dehydrogenase E1 component 209 516 2.8E-53 T 17-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 BJD13_08955 75fa17b19ac51d659fd232218ccfd280 942 Gene3D G3DSA:3.40.50.970 162 529 6.7E-146 T 17-10-2018 BJD13_08955 75fa17b19ac51d659fd232218ccfd280 942 Pfam PF02779 Transketolase, pyrimidine binding domain 595 788 1.3E-62 T 17-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BJD13_08955 75fa17b19ac51d659fd232218ccfd280 942 Gene3D G3DSA:1.10.287.1150 79 161 1.9E-20 T 17-10-2018 BJD13_15870 e64a2b390b2f98b7cc9c0d5b8ac0f473 127 Pfam PF03692 Putative zinc- or iron-chelating domain 4 97 1.5E-12 T 17-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein BJD13_14985 65dd0e328ddb37f5992af854c32776db 301 Pfam PF01040 UbiA prenyltransferase family 39 283 3.7E-60 T 17-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 BJD13_14985 65dd0e328ddb37f5992af854c32776db 301 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 16 299 29.383 T 17-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 BJD13_14985 65dd0e328ddb37f5992af854c32776db 301 Gene3D G3DSA:1.10.357.140 35 180 1.5E-39 T 17-10-2018 BJD13_14985 65dd0e328ddb37f5992af854c32776db 301 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 23 297 2.1E-107 T 17-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 BJD13_14985 65dd0e328ddb37f5992af854c32776db 301 Gene3D G3DSA:1.20.120.1780 181 300 4.9E-13 T 17-10-2018 BJD13_14985 65dd0e328ddb37f5992af854c32776db 301 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 78 100 - T 17-10-2018 IPR030470 UbiA prenyltransferase conserved site BJD13_07195 f9e134cf0f8fa1a286d0b0b5abd7e57a 375 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 4 147 7.8E-21 T 17-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 BJD13_07195 f9e134cf0f8fa1a286d0b0b5abd7e57a 375 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 169 375 36.219 T 17-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 BJD13_07195 f9e134cf0f8fa1a286d0b0b5abd7e57a 375 Gene3D G3DSA:3.40.50.1000 1 153 5.0E-34 T 17-10-2018 IPR023214 HAD superfamily BJD13_07195 f9e134cf0f8fa1a286d0b0b5abd7e57a 375 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 3 164 3.2E-69 T 17-10-2018 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15 BJD13_07195 f9e134cf0f8fa1a286d0b0b5abd7e57a 375 Gene3D G3DSA:3.30.230.40 276 375 2.6E-35 T 17-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 BJD13_07195 f9e134cf0f8fa1a286d0b0b5abd7e57a 375 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 228 241 - T 17-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 BJD13_07195 f9e134cf0f8fa1a286d0b0b5abd7e57a 375 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 198 357 4.1E-64 T 17-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 BJD13_07195 f9e134cf0f8fa1a286d0b0b5abd7e57a 375 SUPERFAMILY SSF56784 1 148 1.18E-31 T 17-10-2018 IPR036412 HAD-like superfamily BJD13_07195 f9e134cf0f8fa1a286d0b0b5abd7e57a 375 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 1 375 49.525 T 17-10-2018 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15 BJD13_07195 f9e134cf0f8fa1a286d0b0b5abd7e57a 375 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 339 351 - T 17-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 BJD13_07195 f9e134cf0f8fa1a286d0b0b5abd7e57a 375 Gene3D G3DSA:3.30.230.40 157 256 5.2E-37 T 17-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 BJD13_07195 f9e134cf0f8fa1a286d0b0b5abd7e57a 375 SUPERFAMILY SSF54211 169 253 2.78E-30 T 17-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BJD13_07195 f9e134cf0f8fa1a286d0b0b5abd7e57a 375 SUPERFAMILY SSF54211 278 362 8.98E-31 T 17-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BJD13_07195 f9e134cf0f8fa1a286d0b0b5abd7e57a 375 Pfam PF13242 HAD-hyrolase-like 102 153 8.6E-5 T 17-10-2018 BJD13_07195 f9e134cf0f8fa1a286d0b0b5abd7e57a 375 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 143 2.9E-34 T 17-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 BJD13_14180 1d3a5a843961f4eb2ac9c91943092571 95 SMART SM00883 2 94 1.7E-51 T 17-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BJD13_14180 1d3a5a843961f4eb2ac9c91943092571 95 SUPERFAMILY SSF50129 1 94 4.36E-31 T 17-10-2018 IPR011032 GroES-like superfamily BJD13_14180 1d3a5a843961f4eb2ac9c91943092571 95 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 17-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 BJD13_14180 1d3a5a843961f4eb2ac9c91943092571 95 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 25.406 T 17-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BJD13_14180 1d3a5a843961f4eb2ac9c91943092571 95 PRINTS PR00297 10kDa chaperonin signature 3 18 3.6E-32 T 17-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BJD13_14180 1d3a5a843961f4eb2ac9c91943092571 95 PRINTS PR00297 10kDa chaperonin signature 60 72 3.6E-32 T 17-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BJD13_14180 1d3a5a843961f4eb2ac9c91943092571 95 PRINTS PR00297 10kDa chaperonin signature 81 94 3.6E-32 T 17-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BJD13_14180 1d3a5a843961f4eb2ac9c91943092571 95 PRINTS PR00297 10kDa chaperonin signature 25 46 3.6E-32 T 17-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BJD13_14180 1d3a5a843961f4eb2ac9c91943092571 95 Gene3D G3DSA:2.30.33.40 1 95 7.5E-38 T 17-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 BJD13_14180 1d3a5a843961f4eb2ac9c91943092571 95 Pfam PF00166 Chaperonin 10 Kd subunit 3 94 8.3E-32 T 17-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BJD13_01805 1006d8969e80ae2875016a4e910f34a5 333 Pfam PF01380 SIS domain 50 181 5.2E-32 T 17-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 BJD13_01805 1006d8969e80ae2875016a4e910f34a5 333 Gene3D G3DSA:3.10.580.10 205 330 3.2E-46 T 17-10-2018 BJD13_01805 1006d8969e80ae2875016a4e910f34a5 333 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 54 323 4.0E-110 T 17-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 BJD13_01805 1006d8969e80ae2875016a4e910f34a5 333 Gene3D G3DSA:3.40.50.10490 12 204 1.2E-59 T 17-10-2018 BJD13_01805 1006d8969e80ae2875016a4e910f34a5 333 SUPERFAMILY SSF53697 22 331 3.11E-69 T 17-10-2018 BJD13_01805 1006d8969e80ae2875016a4e910f34a5 333 Pfam PF00571 CBS domain 212 267 1.2E-8 T 17-10-2018 IPR000644 CBS domain BJD13_01805 1006d8969e80ae2875016a4e910f34a5 333 Pfam PF00571 CBS domain 278 330 1.0E-7 T 17-10-2018 IPR000644 CBS domain BJD13_01805 1006d8969e80ae2875016a4e910f34a5 333 PIRSF PIRSF004692 5 333 4.4E-133 T 17-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 BJD13_01805 1006d8969e80ae2875016a4e910f34a5 333 SMART SM00116 284 332 0.0058 T 17-10-2018 IPR000644 CBS domain BJD13_01805 1006d8969e80ae2875016a4e910f34a5 333 SMART SM00116 219 267 3.5E-5 T 17-10-2018 IPR000644 CBS domain BJD13_10995 26f3e5e78d17888991a3d23661163cdb 1640 PIRSF PIRSF038980 6 1639 0.0 T 17-10-2018 IPR026284 Alpha-2-macroglobulin domain protein, bacteria BJD13_10995 26f3e5e78d17888991a3d23661163cdb 1640 SMART SM01360 953 1042 1.9E-23 T 17-10-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 BJD13_10995 26f3e5e78d17888991a3d23661163cdb 1640 Gene3D G3DSA:1.50.10.20 1149 1418 1.9E-20 T 17-10-2018 BJD13_10995 26f3e5e78d17888991a3d23661163cdb 1640 Pfam PF01835 MG2 domain 386 474 3.8E-19 T 17-10-2018 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 BJD13_10995 26f3e5e78d17888991a3d23661163cdb 1640 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 286 380 1.3E-23 T 17-10-2018 BJD13_10995 26f3e5e78d17888991a3d23661163cdb 1640 Gene3D G3DSA:2.60.40.1930 386 485 5.1E-7 T 17-10-2018 BJD13_10995 26f3e5e78d17888991a3d23661163cdb 1640 SMART SM01359 746 889 2.8E-32 T 17-10-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 BJD13_10995 26f3e5e78d17888991a3d23661163cdb 1640 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 747 889 5.2E-15 T 17-10-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 BJD13_10995 26f3e5e78d17888991a3d23661163cdb 1640 Pfam PF00207 Alpha-2-macroglobulin family 956 1041 5.0E-7 T 17-10-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 BJD13_10995 26f3e5e78d17888991a3d23661163cdb 1640 SUPERFAMILY SSF48239 1153 1412 1.05E-29 T 17-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid BJD13_19890 0b434b3545badbd5415fcebec04b3da9 187 SUPERFAMILY SSF55821 7 185 5.8E-51 T 17-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily BJD13_19890 0b434b3545badbd5415fcebec04b3da9 187 Gene3D G3DSA:3.90.870.10 2 186 2.0E-56 T 17-10-2018 BJD13_19890 0b434b3545badbd5415fcebec04b3da9 187 Pfam PF01300 Telomere recombination 14 186 6.7E-41 T 17-10-2018 IPR006070 YrdC-like domain GO:0003725 BJD13_19890 0b434b3545badbd5415fcebec04b3da9 187 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 4 186 39.094 T 17-10-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 BJD13_02995 bc311da22b0b703068772483a217a0ab 280 Pfam PF02666 Phosphatidylserine decarboxylase 61 277 5.0E-54 T 17-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 BJD13_02995 bc311da22b0b703068772483a217a0ab 280 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 47 278 2.8E-60 T 17-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 BJD13_02995 bc311da22b0b703068772483a217a0ab 280 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 8 280 46.246 T 17-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 BJD13_10120 cf67f41c5119f0f9493e4ec1429bcf2c 873 Pfam PF01624 MutS domain I 20 131 8.4E-41 T 17-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 BJD13_10120 cf67f41c5119f0f9493e4ec1429bcf2c 873 SUPERFAMILY SSF53150 126 277 3.66E-41 T 17-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 BJD13_10120 cf67f41c5119f0f9493e4ec1429bcf2c 873 SUPERFAMILY SSF55271 12 127 7.19E-42 T 17-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 BJD13_10120 cf67f41c5119f0f9493e4ec1429bcf2c 873 Pfam PF05188 MutS domain II 141 264 3.1E-27 T 17-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 BJD13_10120 cf67f41c5119f0f9493e4ec1429bcf2c 873 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 19 865 24.759 T 17-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 BJD13_10120 cf67f41c5119f0f9493e4ec1429bcf2c 873 Gene3D G3DSA:1.10.1420.10 398 514 1.4E-93 T 17-10-2018 BJD13_10120 cf67f41c5119f0f9493e4ec1429bcf2c 873 SMART SM00534 618 810 5.8E-111 T 17-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 BJD13_10120 cf67f41c5119f0f9493e4ec1429bcf2c 873 Pfam PF00488 MutS domain V 621 813 8.0E-82 T 17-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 BJD13_10120 cf67f41c5119f0f9493e4ec1429bcf2c 873 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 19 870 0.0 T 17-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 BJD13_10120 cf67f41c5119f0f9493e4ec1429bcf2c 873 Gene3D G3DSA:1.10.1420.10 278 570 1.4E-93 T 17-10-2018 BJD13_10120 cf67f41c5119f0f9493e4ec1429bcf2c 873 Pfam PF05192 MutS domain III 281 570 4.3E-35 T 17-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 BJD13_10120 cf67f41c5119f0f9493e4ec1429bcf2c 873 PIRSF PIRSF037677 227 852 1.6E-117 T 17-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 BJD13_10120 cf67f41c5119f0f9493e4ec1429bcf2c 873 PIRSF PIRSF037677 11 195 2.3E-25 T 17-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 BJD13_10120 cf67f41c5119f0f9493e4ec1429bcf2c 873 SUPERFAMILY SSF52540 578 814 1.33E-57 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_10120 cf67f41c5119f0f9493e4ec1429bcf2c 873 Gene3D G3DSA:3.40.1170.10 13 133 3.3E-48 T 17-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 BJD13_10120 cf67f41c5119f0f9493e4ec1429bcf2c 873 Pfam PF05190 MutS family domain IV 439 530 3.7E-29 T 17-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 BJD13_10120 cf67f41c5119f0f9493e4ec1429bcf2c 873 SMART SM00533 295 602 1.2E-89 T 17-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 BJD13_10120 cf67f41c5119f0f9493e4ec1429bcf2c 873 SUPERFAMILY SSF48334 279 576 1.7E-82 T 17-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily BJD13_10120 cf67f41c5119f0f9493e4ec1429bcf2c 873 Gene3D G3DSA:3.40.50.300 581 870 4.1E-97 T 17-10-2018 BJD13_10120 cf67f41c5119f0f9493e4ec1429bcf2c 873 Gene3D G3DSA:3.30.420.110 140 272 1.9E-36 T 17-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 BJD13_10120 cf67f41c5119f0f9493e4ec1429bcf2c 873 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 699 715 - T 17-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 BJD13_21405 829714cb292cd809ccab521cced0e9c7 1049 Gene3D G3DSA:2.150.10.10 503 613 3.0E-15 T 17-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BJD13_21405 829714cb292cd809ccab521cced0e9c7 1049 SUPERFAMILY SSF101967 513 688 5.75E-29 T 17-10-2018 BJD13_21405 829714cb292cd809ccab521cced0e9c7 1049 Gene3D G3DSA:2.150.10.10 337 491 7.1E-34 T 17-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BJD13_21405 829714cb292cd809ccab521cced0e9c7 1049 Gene3D G3DSA:2.150.10.10 757 939 5.1E-30 T 17-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BJD13_21405 829714cb292cd809ccab521cced0e9c7 1049 Pfam PF05658 Head domain of trimeric autotransporter adhesin 368 394 3.0E-6 T 17-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 BJD13_21405 829714cb292cd809ccab521cced0e9c7 1049 Pfam PF05658 Head domain of trimeric autotransporter adhesin 307 333 4.0E-4 T 17-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 BJD13_21405 829714cb292cd809ccab521cced0e9c7 1049 Pfam PF05658 Head domain of trimeric autotransporter adhesin 217 241 3.9E-5 T 17-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 BJD13_21405 829714cb292cd809ccab521cced0e9c7 1049 Pfam PF05658 Head domain of trimeric autotransporter adhesin 828 854 1.3E-4 T 17-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 BJD13_21405 829714cb292cd809ccab521cced0e9c7 1049 Pfam PF05658 Head domain of trimeric autotransporter adhesin 616 641 7.2E-5 T 17-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 BJD13_21405 829714cb292cd809ccab521cced0e9c7 1049 Pfam PF05658 Head domain of trimeric autotransporter adhesin 585 611 4.1E-7 T 17-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 BJD13_21405 829714cb292cd809ccab521cced0e9c7 1049 SUPERFAMILY SSF101967 110 189 3.53E-9 T 17-10-2018 BJD13_21405 829714cb292cd809ccab521cced0e9c7 1049 Gene3D G3DSA:1.20.5.170 663 756 1.8E-15 T 17-10-2018 BJD13_21405 829714cb292cd809ccab521cced0e9c7 1049 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 664 695 2.4E-8 T 17-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 BJD13_21405 829714cb292cd809ccab521cced0e9c7 1049 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 468 495 1.1E-8 T 17-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 BJD13_21405 829714cb292cd809ccab521cced0e9c7 1049 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 916 952 2.4E-7 T 17-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 BJD13_21405 829714cb292cd809ccab521cced0e9c7 1049 SUPERFAMILY SSF101967 304 490 7.06E-28 T 17-10-2018 BJD13_21405 829714cb292cd809ccab521cced0e9c7 1049 Gene3D G3DSA:2.60.40.4050 614 657 3.2E-8 T 17-10-2018 BJD13_21405 829714cb292cd809ccab521cced0e9c7 1049 Gene3D G3DSA:3.30.1300.30 945 1049 2.9E-15 T 17-10-2018 BJD13_21405 829714cb292cd809ccab521cced0e9c7 1049 SUPERFAMILY SSF101967 780 937 4.05E-27 T 17-10-2018 BJD13_21405 829714cb292cd809ccab521cced0e9c7 1049 SUPERFAMILY SSF101967 187 299 3.01E-12 T 17-10-2018 BJD13_21405 829714cb292cd809ccab521cced0e9c7 1049 SUPERFAMILY SSF54523 927 1049 7.69E-13 T 17-10-2018 BJD13_21405 829714cb292cd809ccab521cced0e9c7 1049 Gene3D G3DSA:2.150.10.10 111 189 3.0E-10 T 17-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BJD13_21405 829714cb292cd809ccab521cced0e9c7 1049 Gene3D G3DSA:2.150.10.10 190 300 1.5E-15 T 17-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BJD13_21405 829714cb292cd809ccab521cced0e9c7 1049 Pfam PF03895 YadA-like membrane anchor domain 996 1049 2.8E-8 T 17-10-2018 IPR005594 YadA-like, C-terminal BJD13_23050 fc279b284e1542da94dd5c4042a20e43 291 Pfam PF03466 LysR substrate binding domain 92 286 8.3E-39 T 17-10-2018 IPR005119 LysR, substrate-binding BJD13_23050 fc279b284e1542da94dd5c4042a20e43 291 Gene3D G3DSA:1.10.10.10 6 95 4.7E-24 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_23050 fc279b284e1542da94dd5c4042a20e43 291 Gene3D G3DSA:3.40.190.10 103 283 2.1E-61 T 17-10-2018 BJD13_23050 fc279b284e1542da94dd5c4042a20e43 291 Gene3D G3DSA:3.40.190.10 163 257 2.1E-61 T 17-10-2018 BJD13_23050 fc279b284e1542da94dd5c4042a20e43 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 2.8E-21 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_23050 fc279b284e1542da94dd5c4042a20e43 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.7E-9 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_23050 fc279b284e1542da94dd5c4042a20e43 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.7E-9 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_23050 fc279b284e1542da94dd5c4042a20e43 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.7E-9 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_23050 fc279b284e1542da94dd5c4042a20e43 291 SUPERFAMILY SSF53850 93 286 4.52E-37 T 17-10-2018 BJD13_23050 fc279b284e1542da94dd5c4042a20e43 291 SUPERFAMILY SSF46785 3 86 3.56E-23 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_11855 61b9b980010e86602de81b1170bfc9ce 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 26.479 T 17-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid BJD13_11855 61b9b980010e86602de81b1170bfc9ce 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 1.6E-23 T 17-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_11855 61b9b980010e86602de81b1170bfc9ce 101 SUPERFAMILY SSF57716 2 101 5.92E-35 T 17-10-2018 BJD13_11855 61b9b980010e86602de81b1170bfc9ce 101 Gene3D G3DSA:4.10.830.10 40 101 2.3E-21 T 17-10-2018 BJD13_05015 643ed3cc3554a49fcca1025cba8eca6c 296 SUPERFAMILY SSF46785 3 85 4.13E-24 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_05015 643ed3cc3554a49fcca1025cba8eca6c 296 Gene3D G3DSA:1.10.10.10 3 93 5.4E-27 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_05015 643ed3cc3554a49fcca1025cba8eca6c 296 Gene3D G3DSA:3.40.190.10 168 256 5.6E-15 T 17-10-2018 BJD13_05015 643ed3cc3554a49fcca1025cba8eca6c 296 Gene3D G3DSA:3.40.190.10 95 167 5.6E-15 T 17-10-2018 BJD13_05015 643ed3cc3554a49fcca1025cba8eca6c 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 2.4E-9 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_05015 643ed3cc3554a49fcca1025cba8eca6c 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 2.4E-9 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_05015 643ed3cc3554a49fcca1025cba8eca6c 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 2.4E-9 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_05015 643ed3cc3554a49fcca1025cba8eca6c 296 Pfam PF03466 LysR substrate binding domain 90 288 2.9E-22 T 17-10-2018 IPR005119 LysR, substrate-binding BJD13_05015 643ed3cc3554a49fcca1025cba8eca6c 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 1.5E-22 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_05015 643ed3cc3554a49fcca1025cba8eca6c 296 SUPERFAMILY SSF53850 91 288 6.36E-25 T 17-10-2018 BJD13_07155 fec6acf7c243207cf084810ee98e514e 188 SUPERFAMILY SSF51182 1 180 2.84E-38 T 17-10-2018 IPR011051 RmlC-like cupin domain superfamily BJD13_07155 fec6acf7c243207cf084810ee98e514e 188 Pfam PF03079 ARD/ARD' family 5 164 1.9E-32 T 17-10-2018 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 BJD13_07155 fec6acf7c243207cf084810ee98e514e 188 Hamap MF_01682 Acireductone dioxygenase [mtnD]. 1 172 37.732 T 17-10-2018 IPR023956 Acireductone dioxygenase ARD, bacteria GO:0005506|GO:0010308|GO:0010309|GO:0016151|GO:0019284|GO:0055114 KEGG: 00270+1.13.11.54+1.13.11.53|MetaCyc: PWY-4361|MetaCyc: PWY-5389 BJD13_07155 fec6acf7c243207cf084810ee98e514e 188 Gene3D G3DSA:2.60.120.10 2 157 1.7E-51 T 17-10-2018 IPR014710 RmlC-like jelly roll fold BJD13_15055 3234a0fe8c247b6de506548b96a53a08 634 SUPERFAMILY SSF51905 8 267 5.25E-46 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_15055 3234a0fe8c247b6de506548b96a53a08 634 Gene3D G3DSA:1.10.10.1800 465 556 3.3E-25 T 17-10-2018 BJD13_15055 3234a0fe8c247b6de506548b96a53a08 634 Gene3D G3DSA:3.50.50.60 2 242 4.5E-86 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_15055 3234a0fe8c247b6de506548b96a53a08 634 Gene3D G3DSA:3.50.50.60 311 464 4.4E-55 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_15055 3234a0fe8c247b6de506548b96a53a08 634 Pfam PF01134 Glucose inhibited division protein A 9 404 1.0E-162 T 17-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 BJD13_15055 3234a0fe8c247b6de506548b96a53a08 634 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 6 630 41.838 T 17-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 BJD13_15055 3234a0fe8c247b6de506548b96a53a08 634 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 8 627 2.7E-268 T 17-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 BJD13_15055 3234a0fe8c247b6de506548b96a53a08 634 Gene3D G3DSA:1.10.150.570 576 627 2.4E-23 T 17-10-2018 BJD13_15055 3234a0fe8c247b6de506548b96a53a08 634 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 374 397 - T 17-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 BJD13_15055 3234a0fe8c247b6de506548b96a53a08 634 Pfam PF13932 GidA associated domain 409 622 5.0E-72 T 17-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 BJD13_15055 3234a0fe8c247b6de506548b96a53a08 634 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 279 293 - T 17-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 BJD13_15055 3234a0fe8c247b6de506548b96a53a08 634 SMART SM01228 552 623 9.1E-43 T 17-10-2018 BJD13_06955 3a67bf087168192a19ffa07134ffafdf 82 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 6 43 5.6E-11 T 17-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 BJD13_06955 3a67bf087168192a19ffa07134ffafdf 82 SUPERFAMILY SSF89447 2 42 5.76E-11 T 17-10-2018 IPR037914 SpoVT-AbrB domain superfamily BJD13_06955 3a67bf087168192a19ffa07134ffafdf 82 SMART SM00966 3 46 3.4E-11 T 17-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 BJD13_06955 3a67bf087168192a19ffa07134ffafdf 82 Gene3D G3DSA:2.10.260.10 2 41 1.0E-11 T 17-10-2018 BJD13_06955 3a67bf087168192a19ffa07134ffafdf 82 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 3 42 1.2E-12 T 17-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 BJD13_20095 74aa65db2b3e22c9432648c4508bc34f 338 SUPERFAMILY SSF53187 76 210 2.04E-12 T 17-10-2018 BJD13_20095 74aa65db2b3e22c9432648c4508bc34f 338 Gene3D G3DSA:3.40.630.40 2 215 3.0E-13 T 17-10-2018 BJD13_20095 74aa65db2b3e22c9432648c4508bc34f 338 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 60 208 8.5E-10 T 17-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 BJD13_20095 74aa65db2b3e22c9432648c4508bc34f 338 SMART SM00646 87 208 0.0011 T 17-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 BJD13_04155 c427089d92ec8ecc3118f90d7cd3903b 377 SMART SM00382 44 232 6.6E-18 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_04155 c427089d92ec8ecc3118f90d7cd3903b 377 SUPERFAMILY SSF50331 253 375 6.38E-15 T 17-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal BJD13_04155 c427089d92ec8ecc3118f90d7cd3903b 377 SUPERFAMILY SSF52540 20 257 4.92E-86 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_04155 c427089d92ec8ecc3118f90d7cd3903b 377 Gene3D G3DSA:2.40.50.940 239 301 4.9E-11 T 17-10-2018 BJD13_04155 c427089d92ec8ecc3118f90d7cd3903b 377 Gene3D G3DSA:3.40.50.300 19 238 2.5E-67 T 17-10-2018 BJD13_04155 c427089d92ec8ecc3118f90d7cd3903b 377 Pfam PF00005 ABC transporter 36 177 7.5E-36 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD13_04155 c427089d92ec8ecc3118f90d7cd3903b 377 Pfam PF08402 TOBE domain 296 375 4.7E-20 T 17-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 BJD13_04155 c427089d92ec8ecc3118f90d7cd3903b 377 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 50 375 2.6E-125 T 17-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 BJD13_04155 c427089d92ec8ecc3118f90d7cd3903b 377 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD13_04155 c427089d92ec8ecc3118f90d7cd3903b 377 Gene3D G3DSA:2.40.50.140 302 352 4.9E-11 T 17-10-2018 BJD13_23780 7ec35a4c11d43e90abb3a7e69eca1813 354 SUPERFAMILY SSF51726 1 353 5.06E-116 T 17-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 BJD13_23780 7ec35a4c11d43e90abb3a7e69eca1813 354 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 4 352 50.254 T 17-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 BJD13_23780 7ec35a4c11d43e90abb3a7e69eca1813 354 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 20 29 - T 17-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 BJD13_23780 7ec35a4c11d43e90abb3a7e69eca1813 354 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 3 350 7.9E-138 T 17-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 BJD13_23780 7ec35a4c11d43e90abb3a7e69eca1813 354 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 7 349 1.2E-129 T 17-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 BJD13_23780 7ec35a4c11d43e90abb3a7e69eca1813 354 Gene3D G3DSA:3.20.20.210 1 354 3.2E-150 T 17-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 BJD13_23780 7ec35a4c11d43e90abb3a7e69eca1813 354 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 140 156 - T 17-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 BJD13_20945 99a01878b465d4f94926fe2940fb6a94 447 Gene3D G3DSA:3.40.50.2300 1 140 1.3E-26 T 17-10-2018 BJD13_20945 99a01878b465d4f94926fe2940fb6a94 447 Pfam PF00072 Response regulator receiver domain 4 118 1.3E-18 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_20945 99a01878b465d4f94926fe2940fb6a94 447 SUPERFAMILY SSF52172 1 196 1.42E-30 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_20945 99a01878b465d4f94926fe2940fb6a94 447 Gene3D G3DSA:3.40.50.300 141 324 1.7E-59 T 17-10-2018 BJD13_20945 99a01878b465d4f94926fe2940fb6a94 447 Pfam PF02954 Bacterial regulatory protein, Fis family 407 442 2.5E-12 T 17-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD13_20945 99a01878b465d4f94926fe2940fb6a94 447 SUPERFAMILY SSF46689 359 444 4.03E-10 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_20945 99a01878b465d4f94926fe2940fb6a94 447 SMART SM00382 174 317 1.5E-10 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_20945 99a01878b465d4f94926fe2940fb6a94 447 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 359 368 - T 17-10-2018 IPR025944 Sigma-54 interaction domain, conserved site BJD13_20945 99a01878b465d4f94926fe2940fb6a94 447 SMART SM00448 2 118 1.3E-16 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_20945 99a01878b465d4f94926fe2940fb6a94 447 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 408 425 1.9E-8 T 17-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD13_20945 99a01878b465d4f94926fe2940fb6a94 447 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 425 445 1.9E-8 T 17-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD13_20945 99a01878b465d4f94926fe2940fb6a94 447 Gene3D G3DSA:1.10.8.60 325 396 1.4E-17 T 17-10-2018 BJD13_20945 99a01878b465d4f94926fe2940fb6a94 447 Gene3D G3DSA:1.10.10.60 398 446 2.3E-11 T 17-10-2018 BJD13_20945 99a01878b465d4f94926fe2940fb6a94 447 Pfam PF00158 Sigma-54 interaction domain 158 320 1.8E-63 T 17-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 BJD13_20945 99a01878b465d4f94926fe2940fb6a94 447 SUPERFAMILY SSF52540 156 387 1.52E-60 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_20945 99a01878b465d4f94926fe2940fb6a94 447 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 240 255 - T 17-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BJD13_13030 9a7886cc1c3a2d6b334c8ff13f851c38 553 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 552 6.3E-287 T 17-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 BJD13_13030 9a7886cc1c3a2d6b334c8ff13f851c38 553 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD13_13030 9a7886cc1c3a2d6b334c8ff13f851c38 553 SUPERFAMILY SSF52540 303 522 4.18E-47 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_13030 9a7886cc1c3a2d6b334c8ff13f851c38 553 Pfam PF00005 ABC transporter 340 473 2.2E-23 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD13_13030 9a7886cc1c3a2d6b334c8ff13f851c38 553 Gene3D G3DSA:3.40.50.300 2 285 1.3E-80 T 17-10-2018 BJD13_13030 9a7886cc1c3a2d6b334c8ff13f851c38 553 SUPERFAMILY SSF52540 9 237 5.42E-48 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_13030 9a7886cc1c3a2d6b334c8ff13f851c38 553 Pfam PF00005 ABC transporter 23 191 1.0E-28 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD13_13030 9a7886cc1c3a2d6b334c8ff13f851c38 553 Pfam PF12848 ABC transporter 230 306 1.9E-11 T 17-10-2018 IPR032781 ABC-transporter extension domain BJD13_13030 9a7886cc1c3a2d6b334c8ff13f851c38 553 SMART SM00382 348 526 1.5E-10 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_13030 9a7886cc1c3a2d6b334c8ff13f851c38 553 SMART SM00382 31 236 2.7E-8 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_13030 9a7886cc1c3a2d6b334c8ff13f851c38 553 Gene3D G3DSA:3.40.50.300 286 547 6.2E-73 T 17-10-2018 BJD13_10420 155ba3df6c6283c930527c6ba0066f78 256 Gene3D G3DSA:3.90.226.10 2 232 4.1E-55 T 17-10-2018 BJD13_10420 155ba3df6c6283c930527c6ba0066f78 256 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 224 6.0E-41 T 17-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 BJD13_10420 155ba3df6c6283c930527c6ba0066f78 256 SUPERFAMILY SSF52096 8 247 3.13E-48 T 17-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BJD13_04795 1f83d196bbb13396332e0d0e4cc27b29 382 Gene3D G3DSA:3.40.640.10 40 279 2.7E-135 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD13_04795 1f83d196bbb13396332e0d0e4cc27b29 382 Gene3D G3DSA:3.90.1150.10 16 379 2.7E-135 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD13_04795 1f83d196bbb13396332e0d0e4cc27b29 382 SUPERFAMILY SSF53383 2 381 9.14E-103 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD13_04795 1f83d196bbb13396332e0d0e4cc27b29 382 Pfam PF00155 Aminotransferase class I and II 28 379 8.3E-59 T 17-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BJD13_22115 791ed3da443ee9df89d243c183d1aa5b 99 Gene3D G3DSA:1.10.20.30 1 48 9.9E-19 T 17-10-2018 BJD13_22115 791ed3da443ee9df89d243c183d1aa5b 99 SUPERFAMILY SSF102829 7 94 6.41E-23 T 17-10-2018 IPR036192 Cell division protein ZapA-like superfamily BJD13_22115 791ed3da443ee9df89d243c183d1aa5b 99 Pfam PF05164 Cell division protein ZapA 7 91 3.2E-20 T 17-10-2018 IPR007838 Cell division protein ZapA-like BJD13_09290 29ec262baf92ac5302fb1a5af9097902 281 Gene3D G3DSA:3.30.565.40 48 161 3.8E-7 T 17-10-2018 BJD13_11180 06487b80aac265436f071f1e268f57ac 506 Gene3D G3DSA:1.10.150.130 155 270 7.6E-8 T 17-10-2018 IPR010998 Integrase/recombinase, N-terminal BJD13_11180 06487b80aac265436f071f1e268f57ac 506 Gene3D G3DSA:1.10.443.10 291 464 2.8E-14 T 17-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 BJD13_11180 06487b80aac265436f071f1e268f57ac 506 SUPERFAMILY SSF56349 158 458 2.35E-34 T 17-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BJD13_11180 06487b80aac265436f071f1e268f57ac 506 Pfam PF00589 Phage integrase family 279 445 2.4E-9 T 17-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 BJD13_18055 27c4ea40a5af348903ce4854a9dc1b75 440 Gene3D G3DSA:3.30.390.10 1 131 1.3E-54 T 17-10-2018 IPR029017 Enolase-like, N-terminal BJD13_18055 27c4ea40a5af348903ce4854a9dc1b75 440 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 34 136 7.9E-7 T 17-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain BJD13_18055 27c4ea40a5af348903ce4854a9dc1b75 440 SUPERFAMILY SSF51604 184 431 1.11E-69 T 17-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily BJD13_18055 27c4ea40a5af348903ce4854a9dc1b75 440 Pfam PF13378 Enolase C-terminal domain-like 202 415 1.4E-60 T 17-10-2018 IPR029065 Enolase C-terminal domain-like BJD13_18055 27c4ea40a5af348903ce4854a9dc1b75 440 SMART SM00922 199 295 6.7E-27 T 17-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal BJD13_18055 27c4ea40a5af348903ce4854a9dc1b75 440 SUPERFAMILY SSF54826 3 138 1.68E-37 T 17-10-2018 BJD13_18055 27c4ea40a5af348903ce4854a9dc1b75 440 Gene3D G3DSA:3.20.20.120 132 436 1.8E-109 T 17-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily BJD13_18570 baa844c0ecedf353e8a618cac6542501 324 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 92 250 2.9E-7 T 17-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 BJD13_18570 baa844c0ecedf353e8a618cac6542501 324 PIRSF PIRSF028561 1 320 3.2E-168 T 17-10-2018 IPR014548 Predicted acyltransferase BJD13_19860 46cc3007864a8a120838deee92966121 633 SUPERFAMILY SSF52096 328 537 8.03E-40 T 17-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BJD13_19860 46cc3007864a8a120838deee92966121 633 Gene3D G3DSA:3.90.226.10 98 326 3.5E-153 T 17-10-2018 BJD13_19860 46cc3007864a8a120838deee92966121 633 Gene3D G3DSA:3.40.1750.10 189 507 3.5E-153 T 17-10-2018 BJD13_19860 46cc3007864a8a120838deee92966121 633 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 359 547 2.2E-49 T 17-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 BJD13_19860 46cc3007864a8a120838deee92966121 633 SUPERFAMILY SSF52096 40 290 1.22E-14 T 17-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BJD13_19860 46cc3007864a8a120838deee92966121 633 PIRSF PIRSF001217 10 633 7.0E-208 T 17-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 BJD13_19860 46cc3007864a8a120838deee92966121 633 Gene3D G3DSA:3.90.226.10 327 550 3.5E-153 T 17-10-2018 BJD13_19860 46cc3007864a8a120838deee92966121 633 Pfam PF01343 Peptidase family S49 400 551 4.5E-47 T 17-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 BJD13_19860 46cc3007864a8a120838deee92966121 633 Pfam PF01343 Peptidase family S49 142 293 1.5E-22 T 17-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 BJD13_19860 46cc3007864a8a120838deee92966121 633 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 18 578 6.0E-163 T 17-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 BJD13_21735 d66e50eafaec5cffb89e9b447c26d2ec 349 Gene3D G3DSA:3.40.190.10 133 342 1.7E-123 T 17-10-2018 BJD13_21735 d66e50eafaec5cffb89e9b447c26d2ec 349 Pfam PF13531 Bacterial extracellular solute-binding protein 46 294 1.5E-19 T 17-10-2018 BJD13_21735 d66e50eafaec5cffb89e9b447c26d2ec 349 Gene3D G3DSA:3.40.190.10 35 329 1.7E-123 T 17-10-2018 BJD13_21735 d66e50eafaec5cffb89e9b447c26d2ec 349 SUPERFAMILY SSF53850 36 309 9.06E-43 T 17-10-2018 BJD13_18430 88c99ae6731edcb359e5a17a22e1a171 443 Gene3D G3DSA:2.60.200.20 4 109 1.9E-17 T 17-10-2018 BJD13_18430 88c99ae6731edcb359e5a17a22e1a171 443 TIGRFAM TIGR03354 VI_FHA: type VI secretion system FHA domain protein 9 429 1.3E-123 T 17-10-2018 IPR017735 Type VI secretion system, FHA domain-containing protein BJD13_18430 88c99ae6731edcb359e5a17a22e1a171 443 Pfam PF00498 FHA domain 32 95 1.4E-14 T 17-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 BJD13_18430 88c99ae6731edcb359e5a17a22e1a171 443 SMART SM00240 30 79 0.0012 T 17-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 BJD13_18430 88c99ae6731edcb359e5a17a22e1a171 443 SUPERFAMILY SSF49879 28 109 4.21E-19 T 17-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 BJD13_15020 64ac648dc86ef3678b1bd5163764bbbe 294 SUPERFAMILY SSF53335 10 216 3.87E-39 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_15020 64ac648dc86ef3678b1bd5163764bbbe 294 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 5 265 30.36 T 17-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 BJD13_15020 64ac648dc86ef3678b1bd5163764bbbe 294 Pfam PF08241 Methyltransferase domain 51 147 2.5E-20 T 17-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 BJD13_15020 64ac648dc86ef3678b1bd5163764bbbe 294 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 13 264 4.5E-72 T 17-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 BJD13_15020 64ac648dc86ef3678b1bd5163764bbbe 294 Gene3D G3DSA:3.40.50.150 20 226 5.9E-35 T 17-10-2018 BJD13_20975 1eaa55939f9b00b715e5f8a95e575caf 609 Pfam PF01380 SIS domain 463 591 9.8E-26 T 17-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 BJD13_20975 1eaa55939f9b00b715e5f8a95e575caf 609 Pfam PF01380 SIS domain 290 416 5.9E-28 T 17-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 BJD13_20975 1eaa55939f9b00b715e5f8a95e575caf 609 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 609 1.7E-259 T 17-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 BJD13_20975 1eaa55939f9b00b715e5f8a95e575caf 609 SUPERFAMILY SSF53697 244 609 3.34E-109 T 17-10-2018 BJD13_20975 1eaa55939f9b00b715e5f8a95e575caf 609 SUPERFAMILY SSF56235 2 233 8.58E-71 T 17-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BJD13_20975 1eaa55939f9b00b715e5f8a95e575caf 609 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 609 39.261 T 17-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 BJD13_20975 1eaa55939f9b00b715e5f8a95e575caf 609 Gene3D G3DSA:3.40.50.10490 447 594 5.6E-143 T 17-10-2018 BJD13_20975 1eaa55939f9b00b715e5f8a95e575caf 609 Pfam PF13522 Glutamine amidotransferase domain 60 191 2.1E-22 T 17-10-2018 BJD13_20975 1eaa55939f9b00b715e5f8a95e575caf 609 Gene3D G3DSA:3.40.50.10490 248 608 5.6E-143 T 17-10-2018 BJD13_20975 1eaa55939f9b00b715e5f8a95e575caf 609 Gene3D G3DSA:3.60.20.10 2 239 3.6E-77 T 17-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BJD13_23480 4b85f4354841c3d16fd1b8695f9e4eea 570 SUPERFAMILY SSF52058 116 333 2.95E-36 T 17-10-2018 BJD13_23480 4b85f4354841c3d16fd1b8695f9e4eea 570 Gene3D G3DSA:3.80.10.10 50 360 1.0E-96 T 17-10-2018 IPR032675 Leucine-rich repeat domain superfamily BJD13_23480 4b85f4354841c3d16fd1b8695f9e4eea 570 SMART SM00369 214 236 20.0 T 17-10-2018 IPR003591 Leucine-rich repeat, typical subtype BJD13_23480 4b85f4354841c3d16fd1b8695f9e4eea 570 SMART SM00369 158 181 13.0 T 17-10-2018 IPR003591 Leucine-rich repeat, typical subtype BJD13_23480 4b85f4354841c3d16fd1b8695f9e4eea 570 SMART SM00369 237 259 160.0 T 17-10-2018 IPR003591 Leucine-rich repeat, typical subtype BJD13_23480 4b85f4354841c3d16fd1b8695f9e4eea 570 SMART SM00369 308 332 190.0 T 17-10-2018 IPR003591 Leucine-rich repeat, typical subtype BJD13_23480 4b85f4354841c3d16fd1b8695f9e4eea 570 Pfam PF13855 Leucine rich repeat 216 271 2.2E-6 T 17-10-2018 IPR001611 Leucine-rich repeat GO:0005515 BJD13_15140 3d8748edfc12eced48c6f7a91204979a 275 SUPERFAMILY SSF46785 20 94 1.11E-12 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_15140 3d8748edfc12eced48c6f7a91204979a 275 SMART SM00420 23 75 8.8E-15 T 17-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BJD13_15140 3d8748edfc12eced48c6f7a91204979a 275 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 55 73 1.0E-7 T 17-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BJD13_15140 3d8748edfc12eced48c6f7a91204979a 275 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 41 55 1.0E-7 T 17-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BJD13_15140 3d8748edfc12eced48c6f7a91204979a 275 SMART SM01134 89 250 4.4E-72 T 17-10-2018 BJD13_15140 3d8748edfc12eced48c6f7a91204979a 275 Pfam PF00455 DeoR C terminal sensor domain 91 249 1.0E-51 T 17-10-2018 IPR014036 DeoR C-terminal sensor domain BJD13_15140 3d8748edfc12eced48c6f7a91204979a 275 Pfam PF08220 DeoR-like helix-turn-helix domain 23 78 1.0E-16 T 17-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BJD13_15140 3d8748edfc12eced48c6f7a91204979a 275 SUPERFAMILY SSF100950 91 250 7.44E-26 T 17-10-2018 IPR037171 NagB/RpiA transferase-like BJD13_15140 3d8748edfc12eced48c6f7a91204979a 275 ProSitePatterns PS00894 DeoR-type HTH domain signature. 23 57 - T 17-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 BJD13_10930 0182cf5d970ed514f877d4c21026bba9 430 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 430 209.088 T 17-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 BJD13_10930 0182cf5d970ed514f877d4c21026bba9 430 SUPERFAMILY SSF52540 4 429 4.36E-175 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_10930 0182cf5d970ed514f877d4c21026bba9 430 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 429 1.3E-176 T 17-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 BJD13_10930 0182cf5d970ed514f877d4c21026bba9 430 Gene3D G3DSA:3.40.440.10 6 249 3.3E-98 T 17-10-2018 BJD13_10930 0182cf5d970ed514f877d4c21026bba9 430 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 17-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 BJD13_10930 0182cf5d970ed514f877d4c21026bba9 430 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 17-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 BJD13_10930 0182cf5d970ed514f877d4c21026bba9 430 Pfam PF00709 Adenylosuccinate synthetase 5 422 4.6E-176 T 17-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 BJD13_10930 0182cf5d970ed514f877d4c21026bba9 430 Gene3D G3DSA:1.10.300.10 102 201 3.3E-98 T 17-10-2018 BJD13_10930 0182cf5d970ed514f877d4c21026bba9 430 SMART SM00788 4 424 6.0E-289 T 17-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 BJD13_10930 0182cf5d970ed514f877d4c21026bba9 430 Gene3D G3DSA:3.90.170.10 267 430 3.2E-69 T 17-10-2018 BJD13_08455 e41bae7392b2317a6e56bda3f7879498 833 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 117 146 - T 17-10-2018 IPR018239 NAD-dependent DNA ligase, active site BJD13_08455 e41bae7392b2317a6e56bda3f7879498 833 SUPERFAMILY SSF47781 406 650 4.08E-50 T 17-10-2018 IPR010994 RuvA domain 2-like BJD13_08455 e41bae7392b2317a6e56bda3f7879498 833 Pfam PF12826 Helix-hairpin-helix motif 577 640 1.4E-13 T 17-10-2018 BJD13_08455 e41bae7392b2317a6e56bda3f7879498 833 Gene3D G3DSA:2.20.70.80 393 433 5.8E-18 T 17-10-2018 BJD13_08455 e41bae7392b2317a6e56bda3f7879498 833 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 14 493 5.1E-189 T 17-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 BJD13_08455 e41bae7392b2317a6e56bda3f7879498 833 Gene3D G3DSA:2.40.50.140 320 392 2.0E-31 T 17-10-2018 BJD13_08455 e41bae7392b2317a6e56bda3f7879498 833 Gene3D G3DSA:1.10.150.20 573 652 1.7E-21 T 17-10-2018 BJD13_08455 e41bae7392b2317a6e56bda3f7879498 833 PIRSF PIRSF001604 1 665 7.3E-203 T 17-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 BJD13_08455 e41bae7392b2317a6e56bda3f7879498 833 PIRSF PIRSF001604 659 830 1.0E-26 T 17-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 BJD13_08455 e41bae7392b2317a6e56bda3f7879498 833 SUPERFAMILY SSF56091 6 318 2.28E-113 T 17-10-2018 BJD13_08455 e41bae7392b2317a6e56bda3f7879498 833 SUPERFAMILY SSF50249 320 402 2.4E-26 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD13_08455 e41bae7392b2317a6e56bda3f7879498 833 Hamap MF_01588 DNA ligase [ligA]. 5 826 52.155 T 17-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 BJD13_08455 e41bae7392b2317a6e56bda3f7879498 833 SMART SM00292 752 829 1.7E-11 T 17-10-2018 IPR001357 BRCT domain BJD13_08455 e41bae7392b2317a6e56bda3f7879498 833 Gene3D G3DSA:1.10.287.610 1 69 9.9E-26 T 17-10-2018 BJD13_08455 e41bae7392b2317a6e56bda3f7879498 833 SMART SM00532 6 450 1.2E-250 T 17-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 BJD13_08455 e41bae7392b2317a6e56bda3f7879498 833 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 324 398 2.5E-33 T 17-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 BJD13_08455 e41bae7392b2317a6e56bda3f7879498 833 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 9 320 4.2E-121 T 17-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 BJD13_08455 e41bae7392b2317a6e56bda3f7879498 833 Gene3D G3DSA:3.40.50.10190 728 827 2.0E-25 T 17-10-2018 IPR036420 BRCT domain superfamily BJD13_08455 e41bae7392b2317a6e56bda3f7879498 833 SUPERFAMILY SSF52113 752 826 1.77E-17 T 17-10-2018 IPR036420 BRCT domain superfamily BJD13_08455 e41bae7392b2317a6e56bda3f7879498 833 SUPERFAMILY SSF47781 664 734 7.94E-7 T 17-10-2018 IPR010994 RuvA domain 2-like BJD13_08455 e41bae7392b2317a6e56bda3f7879498 833 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 409 436 1.2E-11 T 17-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 BJD13_08455 e41bae7392b2317a6e56bda3f7879498 833 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 753 824 1.6E-12 T 17-10-2018 IPR001357 BRCT domain BJD13_08455 e41bae7392b2317a6e56bda3f7879498 833 Gene3D G3DSA:1.10.150.20 434 501 1.5E-19 T 17-10-2018 BJD13_08455 e41bae7392b2317a6e56bda3f7879498 833 Gene3D G3DSA:3.30.470.90 71 319 2.6E-95 T 17-10-2018 BJD13_16125 0ecabeed09c25c380dd1af76e690424c 211 Gene3D G3DSA:1.25.40.10 44 201 1.3E-8 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_16125 0ecabeed09c25c380dd1af76e690424c 211 SUPERFAMILY SSF48452 63 193 2.47E-8 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_22410 5e85f965b1d48fa2d12d329d6e75f044 214 Gene3D G3DSA:1.10.150.240 17 83 2.0E-59 T 17-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BJD13_22410 5e85f965b1d48fa2d12d329d6e75f044 214 Gene3D G3DSA:3.40.50.1000 6 202 2.0E-59 T 17-10-2018 IPR023214 HAD superfamily BJD13_22410 5e85f965b1d48fa2d12d329d6e75f044 214 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 184 2.9E-34 T 17-10-2018 BJD13_22410 5e85f965b1d48fa2d12d329d6e75f044 214 SUPERFAMILY SSF56784 5 213 6.98E-53 T 17-10-2018 IPR036412 HAD-like superfamily BJD13_16690 c7a1e8573e8344b0ab1a6ca5928d074f 299 SUPERFAMILY SSF51735 3 220 6.76E-50 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_16690 c7a1e8573e8344b0ab1a6ca5928d074f 299 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 190 0.008 T 17-10-2018 BJD13_16690 c7a1e8573e8344b0ab1a6ca5928d074f 299 Pfam PF00106 short chain dehydrogenase 3 192 7.2E-38 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_16690 c7a1e8573e8344b0ab1a6ca5928d074f 299 Gene3D G3DSA:3.40.50.720 2 296 7.1E-74 T 17-10-2018 BJD13_16690 c7a1e8573e8344b0ab1a6ca5928d074f 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 7.8E-19 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_16690 c7a1e8573e8344b0ab1a6ca5928d074f 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 196 216 7.8E-19 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_16690 c7a1e8573e8344b0ab1a6ca5928d074f 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 7.8E-19 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_16690 c7a1e8573e8344b0ab1a6ca5928d074f 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 7.8E-19 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_16690 c7a1e8573e8344b0ab1a6ca5928d074f 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 7.8E-19 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_16690 c7a1e8573e8344b0ab1a6ca5928d074f 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 7.8E-19 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_21700 c8aebeec5f69d9330a516f1a8168221a 343 SUPERFAMILY SSF47413 13 72 1.97E-14 T 17-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BJD13_21700 c8aebeec5f69d9330a516f1a8168221a 343 Gene3D G3DSA:3.40.50.2300 68 322 2.5E-67 T 17-10-2018 BJD13_21700 c8aebeec5f69d9330a516f1a8168221a 343 Gene3D G3DSA:3.40.50.2300 177 305 2.5E-67 T 17-10-2018 BJD13_21700 c8aebeec5f69d9330a516f1a8168221a 343 Gene3D G3DSA:1.10.260.40 7 67 2.7E-17 T 17-10-2018 BJD13_21700 c8aebeec5f69d9330a516f1a8168221a 343 SUPERFAMILY SSF53822 87 342 8.05E-59 T 17-10-2018 IPR028082 Periplasmic binding protein-like I BJD13_21700 c8aebeec5f69d9330a516f1a8168221a 343 Pfam PF13377 Periplasmic binding protein-like domain 185 342 1.7E-38 T 17-10-2018 BJD13_21700 c8aebeec5f69d9330a516f1a8168221a 343 ProSitePatterns PS00356 LacI-type HTH domain signature. 16 34 - T 17-10-2018 BJD13_21700 c8aebeec5f69d9330a516f1a8168221a 343 Pfam PF00356 Bacterial regulatory proteins, lacI family 16 58 2.2E-11 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD13_21700 c8aebeec5f69d9330a516f1a8168221a 343 SMART SM00354 13 83 7.1E-16 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD13_09925 07373a690161186d1698ab642bba5678 250 Hamap MF_01963 S-methyl-5'-thioadenosine phosphorylase [mtnP]. 6 250 33.12 T 17-10-2018 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 Reactome: R-HSA-1237112|Reactome: R-HSA-8950505 BJD13_09925 07373a690161186d1698ab642bba5678 250 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 54 94 - T 17-10-2018 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 BJD13_09925 07373a690161186d1698ab642bba5678 250 Gene3D G3DSA:3.40.50.1580 2 250 8.4E-77 T 17-10-2018 BJD13_09925 07373a690161186d1698ab642bba5678 250 SUPERFAMILY SSF53167 7 248 9.64E-73 T 17-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 BJD13_09925 07373a690161186d1698ab642bba5678 250 Pfam PF01048 Phosphorylase superfamily 8 239 5.6E-39 T 17-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 BJD13_23125 78f087112765e4735c5d511cd5943f0e 242 Pfam PF01709 Transcriptional regulator 7 235 6.9E-88 T 17-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_23125 78f087112765e4735c5d511cd5943f0e 242 SUPERFAMILY SSF75625 7 236 3.53E-85 T 17-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_23125 78f087112765e4735c5d511cd5943f0e 242 Gene3D G3DSA:3.30.70.980 127 203 9.6E-54 T 17-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_23125 78f087112765e4735c5d511cd5943f0e 242 Gene3D G3DSA:3.30.70.980 82 234 9.6E-54 T 17-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_23125 78f087112765e4735c5d511cd5943f0e 242 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 2 237 33.261 T 17-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_23125 78f087112765e4735c5d511cd5943f0e 242 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 6 235 1.1E-86 T 17-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_23125 78f087112765e4735c5d511cd5943f0e 242 Gene3D G3DSA:1.10.10.200 15 78 1.8E-25 T 17-10-2018 IPR017856 Integrase-like, N-terminal BJD13_06320 4944462ebecfb64a92b461962895be24 760 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 214 315 1.5E-10 T 17-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BJD13_06320 4944462ebecfb64a92b461962895be24 760 Gene3D G3DSA:1.10.1780.10 1 142 1.3E-38 T 17-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 BJD13_06320 4944462ebecfb64a92b461962895be24 760 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 521 539 - T 17-10-2018 IPR028299 ClpA/B, conserved site 2 BJD13_06320 4944462ebecfb64a92b461962895be24 760 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 494 512 1.5E-37 T 17-10-2018 IPR001270 ClpA/B family GO:0005524 BJD13_06320 4944462ebecfb64a92b461962895be24 760 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 598 612 1.5E-37 T 17-10-2018 IPR001270 ClpA/B family GO:0005524 BJD13_06320 4944462ebecfb64a92b461962895be24 760 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 536 554 1.5E-37 T 17-10-2018 IPR001270 ClpA/B family GO:0005524 BJD13_06320 4944462ebecfb64a92b461962895be24 760 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 565 583 1.5E-37 T 17-10-2018 IPR001270 ClpA/B family GO:0005524 BJD13_06320 4944462ebecfb64a92b461962895be24 760 SUPERFAMILY SSF81923 1 141 3.53E-56 T 17-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 BJD13_06320 4944462ebecfb64a92b461962895be24 760 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 1.6E-12 T 17-10-2018 IPR004176 Clp, N-terminal BJD13_06320 4944462ebecfb64a92b461962895be24 760 SMART SM01086 656 745 1.7E-32 T 17-10-2018 IPR019489 Clp ATPase, C-terminal BJD13_06320 4944462ebecfb64a92b461962895be24 760 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 657 735 5.0E-22 T 17-10-2018 IPR019489 Clp ATPase, C-terminal BJD13_06320 4944462ebecfb64a92b461962895be24 760 SUPERFAMILY SSF52540 171 433 1.97E-67 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_06320 4944462ebecfb64a92b461962895be24 760 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 305 317 - T 17-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 BJD13_06320 4944462ebecfb64a92b461962895be24 760 Gene3D G3DSA:3.40.50.300 442 654 2.0E-74 T 17-10-2018 BJD13_06320 4944462ebecfb64a92b461962895be24 760 SUPERFAMILY SSF52540 440 745 3.16E-74 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_06320 4944462ebecfb64a92b461962895be24 760 Gene3D G3DSA:1.10.8.60 656 753 2.3E-28 T 17-10-2018 BJD13_06320 4944462ebecfb64a92b461962895be24 760 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 737 0.0 T 17-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 BJD13_06320 4944462ebecfb64a92b461962895be24 760 SMART SM00382 490 626 2.7E-9 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_06320 4944462ebecfb64a92b461962895be24 760 SMART SM00382 209 354 5.5E-10 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_06320 4944462ebecfb64a92b461962895be24 760 Gene3D G3DSA:1.10.8.60 359 441 2.2E-32 T 17-10-2018 BJD13_06320 4944462ebecfb64a92b461962895be24 760 Gene3D G3DSA:3.40.50.300 169 358 8.2E-63 T 17-10-2018 BJD13_06320 4944462ebecfb64a92b461962895be24 760 Pfam PF07724 AAA domain (Cdc48 subfamily) 489 650 8.2E-46 T 17-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BJD13_22925 c446ec167555bc746992b1165c1b7360 348 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 14 345 5.8E-133 T 17-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 BJD13_22925 c446ec167555bc746992b1165c1b7360 348 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 12 347 36.453 T 17-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 BJD13_22925 c446ec167555bc746992b1165c1b7360 348 Gene3D G3DSA:3.40.50.10210 56 328 6.2E-125 T 17-10-2018 BJD13_22925 c446ec167555bc746992b1165c1b7360 348 SUPERFAMILY SSF52733 5 346 6.8E-113 T 17-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 BJD13_22925 c446ec167555bc746992b1165c1b7360 348 Gene3D G3DSA:1.10.1610.10 24 345 6.2E-125 T 17-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 BJD13_22925 c446ec167555bc746992b1165c1b7360 348 Pfam PF02277 Phosphoribosyltransferase 13 345 8.8E-126 T 17-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 BJD13_09245 d579f9fe76969bddcc7823632bbdb060 228 SMART SM00947 66 227 2.6E-53 T 17-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 BJD13_09245 d579f9fe76969bddcc7823632bbdb060 228 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 115 135 - T 17-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 BJD13_09245 d579f9fe76969bddcc7823632bbdb060 228 Gene3D G3DSA:3.40.1050.10 22 228 3.4E-63 T 17-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 BJD13_09245 d579f9fe76969bddcc7823632bbdb060 228 SUPERFAMILY SSF53056 17 227 4.45E-54 T 17-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 BJD13_09245 d579f9fe76969bddcc7823632bbdb060 228 Pfam PF00484 Carbonic anhydrase 74 223 5.7E-40 T 17-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 BJD13_09245 d579f9fe76969bddcc7823632bbdb060 228 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 78 85 - T 17-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 BJD13_06165 ab56bacaec590cadcad19b6d02c1ea99 256 Pfam PF06884 Protein of unknown function (DUF1264) 54 222 2.8E-60 T 17-10-2018 IPR010686 Oil body-associated protein-like BJD13_18710 329738b4c970066b943ce1d1e4a5be2e 347 PIRSF PIRSF000355 3 347 2.5E-112 T 17-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BJD13_18710 329738b4c970066b943ce1d1e4a5be2e 347 Pfam PF00268 Ribonucleotide reductase, small chain 32 305 4.3E-68 T 17-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BJD13_18710 329738b4c970066b943ce1d1e4a5be2e 347 Gene3D G3DSA:1.10.620.20 27 318 2.1E-78 T 17-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 BJD13_18710 329738b4c970066b943ce1d1e4a5be2e 347 SUPERFAMILY SSF47240 23 347 2.13E-85 T 17-10-2018 IPR009078 Ferritin-like superfamily BJD13_18875 2e0c8a88950a0b1f9e87f80ee2f32eb1 283 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 113 194 3.5E-12 T 17-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase BJD13_18875 2e0c8a88950a0b1f9e87f80ee2f32eb1 283 SUPERFAMILY SSF51735 103 273 6.06E-38 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_18875 2e0c8a88950a0b1f9e87f80ee2f32eb1 283 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 8 90 1.0E-25 T 17-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 BJD13_18875 2e0c8a88950a0b1f9e87f80ee2f32eb1 283 SUPERFAMILY SSF53223 4 102 1.27E-32 T 17-10-2018 BJD13_18875 2e0c8a88950a0b1f9e87f80ee2f32eb1 283 Gene3D G3DSA:3.40.50.10860 6 263 4.2E-77 T 17-10-2018 BJD13_18875 2e0c8a88950a0b1f9e87f80ee2f32eb1 283 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 3 274 33.012 T 17-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 BJD13_18875 2e0c8a88950a0b1f9e87f80ee2f32eb1 283 Gene3D G3DSA:3.40.50.720 102 242 4.2E-77 T 17-10-2018 BJD13_18875 2e0c8a88950a0b1f9e87f80ee2f32eb1 283 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 6 273 3.8E-72 T 17-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 BJD13_06155 2110f22a6ebdebc826e25d2333cb08c8 91 Gene3D G3DSA:1.20.1280.290 1 86 1.5E-11 T 17-10-2018 BJD13_06155 2110f22a6ebdebc826e25d2333cb08c8 91 Pfam PF04193 PQ loop repeat 4 58 8.7E-5 T 17-10-2018 IPR006603 PQ-loop repeat BJD13_09165 5c54636b5cef6cc4407bac92764ae0cf 476 Gene3D G3DSA:3.40.50.300 194 472 7.7E-109 T 17-10-2018 BJD13_09165 5c54636b5cef6cc4407bac92764ae0cf 476 Pfam PF00772 DnaB-like helicase N terminal domain 33 134 2.0E-36 T 17-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 BJD13_09165 5c54636b5cef6cc4407bac92764ae0cf 476 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 33 468 3.1E-178 T 17-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 BJD13_09165 5c54636b5cef6cc4407bac92764ae0cf 476 SUPERFAMILY SSF52540 209 459 6.56E-55 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_09165 5c54636b5cef6cc4407bac92764ae0cf 476 Gene3D G3DSA:1.10.860.10 26 188 3.6E-55 T 17-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal BJD13_09165 5c54636b5cef6cc4407bac92764ae0cf 476 Pfam PF03796 DnaB-like helicase C terminal domain 211 466 2.8E-117 T 17-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 BJD13_09165 5c54636b5cef6cc4407bac92764ae0cf 476 SUPERFAMILY SSF48024 31 143 7.06E-39 T 17-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 BJD13_21645 de796cebe476994e8d7907e12fc30419 308 Gene3D G3DSA:2.60.300.12 115 198 4.8E-6 T 17-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 BJD13_21645 de796cebe476994e8d7907e12fc30419 308 Gene3D G3DSA:3.40.30.10 10 104 3.2E-30 T 17-10-2018 BJD13_21645 de796cebe476994e8d7907e12fc30419 308 SMART SM00450 208 303 1.0E-12 T 17-10-2018 IPR001763 Rhodanese-like domain BJD13_21645 de796cebe476994e8d7907e12fc30419 308 SUPERFAMILY SSF89360 114 201 4.9E-11 T 17-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 BJD13_21645 de796cebe476994e8d7907e12fc30419 308 Pfam PF00581 Rhodanese-like domain 211 299 5.9E-8 T 17-10-2018 IPR001763 Rhodanese-like domain BJD13_21645 de796cebe476994e8d7907e12fc30419 308 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 9 103 1.5E-39 T 17-10-2018 IPR004480 Monothiol glutaredoxin-related BJD13_21645 de796cebe476994e8d7907e12fc30419 308 Pfam PF00462 Glutaredoxin 20 84 3.9E-19 T 17-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 BJD13_21645 de796cebe476994e8d7907e12fc30419 308 Gene3D G3DSA:3.40.250.10 199 304 1.5E-19 T 17-10-2018 IPR036873 Rhodanese-like domain superfamily BJD13_21645 de796cebe476994e8d7907e12fc30419 308 SUPERFAMILY SSF52833 8 104 9.17E-31 T 17-10-2018 IPR036249 Thioredoxin-like superfamily BJD13_21645 de796cebe476994e8d7907e12fc30419 308 SUPERFAMILY SSF52821 201 302 3.01E-21 T 17-10-2018 IPR036873 Rhodanese-like domain superfamily BJD13_19830 e1bb871508b00f0ca4cd14a9ea4db42e 216 Pfam PF00043 Glutathione S-transferase, C-terminal domain 129 205 4.5E-7 T 17-10-2018 IPR004046 Glutathione S-transferase, C-terminal BJD13_19830 e1bb871508b00f0ca4cd14a9ea4db42e 216 Pfam PF13417 Glutathione S-transferase, N-terminal domain 17 89 1.8E-15 T 17-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 BJD13_19830 e1bb871508b00f0ca4cd14a9ea4db42e 216 SUPERFAMILY SSF47616 90 212 1.16E-27 T 17-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily BJD13_19830 e1bb871508b00f0ca4cd14a9ea4db42e 216 Gene3D G3DSA:3.40.30.10 12 93 2.9E-32 T 17-10-2018 BJD13_19830 e1bb871508b00f0ca4cd14a9ea4db42e 216 Gene3D G3DSA:1.20.1050.10 94 210 3.6E-41 T 17-10-2018 BJD13_19830 e1bb871508b00f0ca4cd14a9ea4db42e 216 SUPERFAMILY SSF52833 5 93 2.78E-24 T 17-10-2018 IPR036249 Thioredoxin-like superfamily BJD13_12125 af0ba51fd2f368140c9f66a1aa1a0049 406 Pfam PF02055 Glycosyl hydrolase family 30 TIM-barrel domain 103 162 3.6E-5 T 17-10-2018 IPR033453 Glycosyl hydrolase family 30, TIM-barrel domain Reactome: R-HSA-1660662|Reactome: R-HSA-390471 BJD13_12125 af0ba51fd2f368140c9f66a1aa1a0049 406 Pfam PF17189 Glycosyl hydrolase family 30 beta sandwich domain 315 403 2.6E-12 T 17-10-2018 IPR033452 Glycosyl hydrolase family 30, beta sandwich domain Reactome: R-HSA-1660662|Reactome: R-HSA-390471 BJD13_12125 af0ba51fd2f368140c9f66a1aa1a0049 406 SUPERFAMILY SSF51445 40 314 3.99E-51 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily BJD13_12125 af0ba51fd2f368140c9f66a1aa1a0049 406 SUPERFAMILY SSF51011 311 405 1.44E-24 T 17-10-2018 BJD13_12125 af0ba51fd2f368140c9f66a1aa1a0049 406 Gene3D G3DSA:2.60.40.1180 32 404 5.9E-141 T 17-10-2018 IPR013780 Glycosyl hydrolase, all-beta BJD13_12125 af0ba51fd2f368140c9f66a1aa1a0049 406 Gene3D G3DSA:3.20.20.80 40 314 5.9E-141 T 17-10-2018 BJD13_13435 ba4623877741f7e3489d747e158d1106 658 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 555 564 - T 17-10-2018 IPR025944 Sigma-54 interaction domain, conserved site BJD13_13435 ba4623877741f7e3489d747e158d1106 658 Gene3D G3DSA:3.30.450.40 30 219 3.8E-44 T 17-10-2018 IPR029016 GAF-like domain superfamily BJD13_13435 ba4623877741f7e3489d747e158d1106 658 SUPERFAMILY SSF52540 345 585 1.22E-61 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_13435 ba4623877741f7e3489d747e158d1106 658 Pfam PF02954 Bacterial regulatory protein, Fis family 613 653 3.4E-15 T 17-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD13_13435 ba4623877741f7e3489d747e158d1106 658 Gene3D G3DSA:1.10.8.60 518 590 4.3E-15 T 17-10-2018 BJD13_13435 ba4623877741f7e3489d747e158d1106 658 SUPERFAMILY SSF46689 555 655 2.0E-16 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_13435 ba4623877741f7e3489d747e158d1106 658 SMART SM00382 365 509 1.1E-9 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_13435 ba4623877741f7e3489d747e158d1106 658 Gene3D G3DSA:3.40.50.300 333 517 1.5E-56 T 17-10-2018 BJD13_13435 ba4623877741f7e3489d747e158d1106 658 Gene3D G3DSA:1.10.10.60 608 657 2.8E-16 T 17-10-2018 BJD13_13435 ba4623877741f7e3489d747e158d1106 658 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 619 636 1.1E-9 T 17-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD13_13435 ba4623877741f7e3489d747e158d1106 658 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 636 656 1.1E-9 T 17-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD13_13435 ba4623877741f7e3489d747e158d1106 658 SUPERFAMILY SSF55781 78 218 9.32E-9 T 17-10-2018 BJD13_13435 ba4623877741f7e3489d747e158d1106 658 Pfam PF01590 GAF domain 93 217 3.9E-6 T 17-10-2018 IPR003018 GAF domain GO:0005515 BJD13_13435 ba4623877741f7e3489d747e158d1106 658 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 432 447 - T 17-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BJD13_13435 ba4623877741f7e3489d747e158d1106 658 Pfam PF00158 Sigma-54 interaction domain 346 512 2.4E-59 T 17-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 BJD13_24030 27a95c4077ff7380d3c0241ba0089ce0 260 SUPERFAMILY SSF53955 14 154 1.13E-15 T 17-10-2018 IPR023346 Lysozyme-like domain superfamily BJD13_24030 27a95c4077ff7380d3c0241ba0089ce0 260 Pfam PF01464 Transglycosylase SLT domain 8 135 1.6E-14 T 17-10-2018 IPR008258 Transglycosylase SLT domain 1 BJD13_24030 27a95c4077ff7380d3c0241ba0089ce0 260 Gene3D G3DSA:1.10.530.10 7 155 1.1E-11 T 17-10-2018 BJD13_14435 3c685ddffba3fe9648e11e5441128be5 130 SUPERFAMILY SSF54211 6 130 1.97E-47 T 17-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BJD13_14435 3c685ddffba3fe9648e11e5441128be5 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 17-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 BJD13_14435 3c685ddffba3fe9648e11e5441128be5 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 1.9E-46 T 17-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 BJD13_14435 3c685ddffba3fe9648e11e5441128be5 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 32.471 T 17-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid BJD13_14435 3c685ddffba3fe9648e11e5441128be5 130 Gene3D G3DSA:3.30.230.10 1 130 1.8E-52 T 17-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BJD13_11985 4bff501a17f43c839d59f05c3b391a2f 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 5.1E-64 T 17-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_11985 4bff501a17f43c839d59f05c3b391a2f 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 1.3E-28 T 17-10-2018 IPR020784 Ribosomal protein L11, N-terminal BJD13_11985 4bff501a17f43c839d59f05c3b391a2f 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 17-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_11985 4bff501a17f43c839d59f05c3b391a2f 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 1.3E-23 T 17-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 BJD13_11985 4bff501a17f43c839d59f05c3b391a2f 142 SMART SM00649 9 141 3.7E-81 T 17-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 BJD13_11985 4bff501a17f43c839d59f05c3b391a2f 142 Gene3D G3DSA:1.10.10.2720 73 142 1.1E-26 T 17-10-2018 BJD13_11985 4bff501a17f43c839d59f05c3b391a2f 142 Gene3D G3DSA:3.30.1550.10 2 72 4.7E-34 T 17-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily BJD13_11985 4bff501a17f43c839d59f05c3b391a2f 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.444 T 17-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 BJD13_11985 4bff501a17f43c839d59f05c3b391a2f 142 SUPERFAMILY SSF46906 68 141 4.06E-24 T 17-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily BJD13_11985 4bff501a17f43c839d59f05c3b391a2f 142 SUPERFAMILY SSF54747 3 72 1.28E-28 T 17-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily BJD13_11985 4bff501a17f43c839d59f05c3b391a2f 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 72 2.0E-15 T 17-10-2018 BJD13_15110 2ae1432dcdc3c4f23d45dcf89640fed7 244 SUPERFAMILY SSF49482 24 243 7.06E-73 T 17-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 BJD13_15110 2ae1432dcdc3c4f23d45dcf89640fed7 244 TIGRFAM TIGR02422 protocat_beta: protocatechuate 3,4-dioxygenase, beta subunit 27 244 5.7E-96 T 17-10-2018 IPR012785 Protocatechuate 3,4-dioxygenase, beta subunit GO:0005506|GO:0018578|GO:0019619|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|MetaCyc: PWY-6041 BJD13_15110 2ae1432dcdc3c4f23d45dcf89640fed7 244 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 88 116 - T 17-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 BJD13_15110 2ae1432dcdc3c4f23d45dcf89640fed7 244 Pfam PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal 18 52 1.3E-8 T 17-10-2018 IPR024756 Protocatechuate 3,4-dioxygenase beta subunit, N-terminal KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|MetaCyc: PWY-6041 BJD13_15110 2ae1432dcdc3c4f23d45dcf89640fed7 244 Pfam PF00775 Dioxygenase 67 237 1.4E-53 T 17-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 BJD13_15110 2ae1432dcdc3c4f23d45dcf89640fed7 244 Gene3D G3DSA:2.60.130.10 17 244 5.5E-83 T 17-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 BJD13_20270 31d5b33c077f532bd9e7b46ead49f30e 307 SUPERFAMILY SSF53850 89 299 8.14E-37 T 17-10-2018 BJD13_20270 31d5b33c077f532bd9e7b46ead49f30e 307 SUPERFAMILY SSF46785 4 87 9.25E-19 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_20270 31d5b33c077f532bd9e7b46ead49f30e 307 Pfam PF03466 LysR substrate binding domain 88 293 2.1E-34 T 17-10-2018 IPR005119 LysR, substrate-binding BJD13_20270 31d5b33c077f532bd9e7b46ead49f30e 307 Gene3D G3DSA:1.10.10.10 3 89 1.3E-24 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_20270 31d5b33c077f532bd9e7b46ead49f30e 307 Gene3D G3DSA:3.40.190.290 91 295 5.3E-54 T 17-10-2018 BJD13_20270 31d5b33c077f532bd9e7b46ead49f30e 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 9.3E-17 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_14965 a79785632ca82fdbfb72c9d772864260 483 SMART SM00369 184 207 28.0 T 17-10-2018 IPR003591 Leucine-rich repeat, typical subtype BJD13_14965 a79785632ca82fdbfb72c9d772864260 483 SMART SM00369 136 160 7.7 T 17-10-2018 IPR003591 Leucine-rich repeat, typical subtype BJD13_14965 a79785632ca82fdbfb72c9d772864260 483 SMART SM00369 42 65 51.0 T 17-10-2018 IPR003591 Leucine-rich repeat, typical subtype BJD13_14965 a79785632ca82fdbfb72c9d772864260 483 Gene3D G3DSA:3.80.10.10 1 235 4.0E-47 T 17-10-2018 IPR032675 Leucine-rich repeat domain superfamily BJD13_14965 a79785632ca82fdbfb72c9d772864260 483 SUPERFAMILY SSF52058 1 209 7.48E-32 T 17-10-2018 BJD13_22770 b36e39e4e75dc6ae1157fa177f93d7ba 100 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 93 1.7E-13 T 17-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family BJD13_22770 b36e39e4e75dc6ae1157fa177f93d7ba 100 Gene3D G3DSA:3.30.2310.20 1 94 4.8E-9 T 17-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily BJD13_12905 0a9bd5a993c00fc83126a74ce65b63ee 122 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 5 118 9.1E-33 T 17-10-2018 IPR003509 Uncharacterised protein family UPF0102 BJD13_12905 0a9bd5a993c00fc83126a74ce65b63ee 122 Gene3D G3DSA:3.40.1350.10 11 122 3.7E-28 T 17-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 BJD13_12905 0a9bd5a993c00fc83126a74ce65b63ee 122 Hamap MF_00048 UPF0102 protein YraN [yraN]. 5 116 22.015 T 17-10-2018 IPR003509 Uncharacterised protein family UPF0102 BJD13_12905 0a9bd5a993c00fc83126a74ce65b63ee 122 SUPERFAMILY SSF52980 7 105 2.41E-16 T 17-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 BJD13_12905 0a9bd5a993c00fc83126a74ce65b63ee 122 Pfam PF02021 Uncharacterised protein family UPF0102 13 101 1.6E-21 T 17-10-2018 IPR003509 Uncharacterised protein family UPF0102 BJD13_18120 48fedec6cc4ddfec3ea8c3d56ce9becb 222 Gene3D G3DSA:3.40.50.2300 1 129 4.6E-27 T 17-10-2018 BJD13_18120 48fedec6cc4ddfec3ea8c3d56ce9becb 222 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_18120 48fedec6cc4ddfec3ea8c3d56ce9becb 222 SUPERFAMILY SSF52172 2 133 1.1E-26 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_18120 48fedec6cc4ddfec3ea8c3d56ce9becb 222 SMART SM00448 2 116 2.5E-20 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_18120 48fedec6cc4ddfec3ea8c3d56ce9becb 222 Gene3D G3DSA:1.10.10.10 148 214 7.2E-22 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_18120 48fedec6cc4ddfec3ea8c3d56ce9becb 222 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 204 6.9E-19 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_18120 48fedec6cc4ddfec3ea8c3d56ce9becb 222 SMART SM00421 147 204 1.4E-23 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_18120 48fedec6cc4ddfec3ea8c3d56ce9becb 222 SUPERFAMILY SSF46894 141 206 3.13E-19 T 17-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BJD13_18120 48fedec6cc4ddfec3ea8c3d56ce9becb 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 1.3E-10 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_18120 48fedec6cc4ddfec3ea8c3d56ce9becb 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 1.3E-10 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_18120 48fedec6cc4ddfec3ea8c3d56ce9becb 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 1.3E-10 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_18120 48fedec6cc4ddfec3ea8c3d56ce9becb 222 Pfam PF00072 Response regulator receiver domain 5 114 9.3E-22 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_20455 e7e49d21ed887670b9bc51c96698d558 394 Pfam PF13692 Glycosyl transferases group 1 240 359 8.1E-9 T 17-10-2018 BJD13_20455 e7e49d21ed887670b9bc51c96698d558 394 Gene3D G3DSA:3.40.50.2000 209 367 4.9E-30 T 17-10-2018 BJD13_20455 e7e49d21ed887670b9bc51c96698d558 394 SUPERFAMILY SSF53756 153 388 2.77E-17 T 17-10-2018 BJD13_02550 5fd46562c7a9855e9f18349341954f7b 801 SMART SM00091 247 313 3.0E-5 T 17-10-2018 IPR000014 PAS domain BJD13_02550 5fd46562c7a9855e9f18349341954f7b 801 Gene3D G3DSA:3.30.450.20 235 356 1.7E-13 T 17-10-2018 BJD13_02550 5fd46562c7a9855e9f18349341954f7b 801 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 368 530 3.6E-38 T 17-10-2018 IPR000160 GGDEF domain BJD13_02550 5fd46562c7a9855e9f18349341954f7b 801 SUPERFAMILY SSF141868 549 792 2.62E-65 T 17-10-2018 IPR035919 EAL domain superfamily BJD13_02550 5fd46562c7a9855e9f18349341954f7b 801 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 245 363 1.9E-13 T 17-10-2018 IPR000014 PAS domain BJD13_02550 5fd46562c7a9855e9f18349341954f7b 801 SMART SM00086 317 359 3.3E-4 T 17-10-2018 IPR001610 PAC motif BJD13_02550 5fd46562c7a9855e9f18349341954f7b 801 SMART SM00267 359 531 8.5E-54 T 17-10-2018 IPR000160 GGDEF domain BJD13_02550 5fd46562c7a9855e9f18349341954f7b 801 Gene3D G3DSA:3.30.70.270 364 532 7.3E-49 T 17-10-2018 BJD13_02550 5fd46562c7a9855e9f18349341954f7b 801 SUPERFAMILY SSF55785 235 357 4.36E-15 T 17-10-2018 IPR035965 PAS domain superfamily BJD13_02550 5fd46562c7a9855e9f18349341954f7b 801 Pfam PF08447 PAS fold 270 340 8.3E-6 T 17-10-2018 IPR013655 PAS fold-3 GO:0005515 BJD13_02550 5fd46562c7a9855e9f18349341954f7b 801 SMART SM00052 543 789 1.5E-50 T 17-10-2018 IPR001633 EAL domain BJD13_02550 5fd46562c7a9855e9f18349341954f7b 801 SUPERFAMILY SSF55073 375 533 2.75E-44 T 17-10-2018 IPR029787 Nucleotide cyclase BJD13_02550 5fd46562c7a9855e9f18349341954f7b 801 Gene3D G3DSA:3.20.20.450 533 791 9.1E-70 T 17-10-2018 IPR035919 EAL domain superfamily BJD13_02550 5fd46562c7a9855e9f18349341954f7b 801 Pfam PF00563 EAL domain 549 784 5.1E-56 T 17-10-2018 IPR001633 EAL domain BJD13_02550 5fd46562c7a9855e9f18349341954f7b 801 Pfam PF00990 Diguanylate cyclase, GGDEF domain 370 527 2.8E-38 T 17-10-2018 IPR000160 GGDEF domain BJD13_19525 24051e69173b430a55180a4a4d775340 198 SUPERFAMILY SSF110111 64 179 6.15E-45 T 17-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_19525 24051e69173b430a55180a4a4d775340 198 Gene3D G3DSA:2.60.370.10 60 188 4.2E-45 T 17-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_19525 24051e69173b430a55180a4a4d775340 198 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 31 177 2.0E-46 T 17-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_19525 24051e69173b430a55180a4a4d775340 198 PIRSF PIRSF005413 2 192 7.9E-60 T 17-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_18830 45baf55050372a24e468fa73a9deba7b 750 SUPERFAMILY SSF53474 492 741 3.27E-74 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_18830 45baf55050372a24e468fa73a9deba7b 750 Gene3D G3DSA:2.140.10.30 22 482 2.7E-182 T 17-10-2018 IPR038554 Dipeptidylpeptidase IV, N-terminal domain superfamily BJD13_18830 45baf55050372a24e468fa73a9deba7b 750 SUPERFAMILY SSF82171 21 472 1.22E-53 T 17-10-2018 BJD13_18830 45baf55050372a24e468fa73a9deba7b 750 Gene3D G3DSA:3.40.50.1820 484 742 2.0E-86 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_18830 45baf55050372a24e468fa73a9deba7b 750 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 129 451 9.6E-95 T 17-10-2018 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 BJD13_18830 45baf55050372a24e468fa73a9deba7b 750 Pfam PF00326 Prolyl oligopeptidase family 547 741 2.1E-56 T 17-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 BJD13_09385 32af621b9d1e4a837040c5b005fe5f39 712 Pfam PF00593 TonB dependent receptor 244 711 4.5E-51 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_09385 32af621b9d1e4a837040c5b005fe5f39 712 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 695 712 - T 17-10-2018 IPR010917 TonB-dependent receptor, conserved site BJD13_09385 32af621b9d1e4a837040c5b005fe5f39 712 Gene3D G3DSA:2.40.170.20 166 712 1.2E-101 T 17-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BJD13_09385 32af621b9d1e4a837040c5b005fe5f39 712 Gene3D G3DSA:2.170.130.10 44 165 3.6E-33 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_09385 32af621b9d1e4a837040c5b005fe5f39 712 SUPERFAMILY SSF56935 27 712 2.02E-114 T 17-10-2018 BJD13_09385 32af621b9d1e4a837040c5b005fe5f39 712 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 65 712 2.2E-84 T 17-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 BJD13_09385 32af621b9d1e4a837040c5b005fe5f39 712 Pfam PF07715 TonB-dependent Receptor Plug Domain 65 156 2.1E-17 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_21235 c4f3ba633969807d4d15b2847b08b8a9 209 Pfam PF01144 Coenzyme A transferase 7 195 8.9E-42 T 17-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 BJD13_21235 c4f3ba633969807d4d15b2847b08b8a9 209 Gene3D G3DSA:3.40.1080.10 2 209 2.4E-103 T 17-10-2018 BJD13_21235 c4f3ba633969807d4d15b2847b08b8a9 209 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 3 208 3.2E-100 T 17-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 BJD13_21235 c4f3ba633969807d4d15b2847b08b8a9 209 SUPERFAMILY SSF100950 3 208 2.61E-73 T 17-10-2018 IPR037171 NagB/RpiA transferase-like BJD13_21235 c4f3ba633969807d4d15b2847b08b8a9 209 SMART SM00882 6 202 1.2E-79 T 17-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 BJD13_21235 c4f3ba633969807d4d15b2847b08b8a9 209 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 44 52 - T 17-10-2018 IPR004164 Coenzyme A transferase active site GO:0008410 Reactome: R-HSA-77108 BJD13_16555 f498ae81db75f35ab14b011774b061a9 218 Gene3D G3DSA:3.40.50.150 4 210 1.2E-14 T 17-10-2018 BJD13_16555 f498ae81db75f35ab14b011774b061a9 218 Pfam PF06080 Protein of unknown function (DUF938) 6 213 2.2E-81 T 17-10-2018 IPR010342 Protein of unknown function DUF938 BJD13_16555 f498ae81db75f35ab14b011774b061a9 218 SUPERFAMILY SSF53335 5 208 1.18E-20 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_14545 86fa28a528211d146b48bb3dee0bcc3f 584 Pfam PF00182 Chitinase class I 102 164 5.2E-6 T 17-10-2018 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 BJD13_14545 86fa28a528211d146b48bb3dee0bcc3f 584 Gene3D G3DSA:1.10.101.10 382 462 6.9E-20 T 17-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 BJD13_14545 86fa28a528211d146b48bb3dee0bcc3f 584 SUPERFAMILY SSF51261 225 358 2.88E-14 T 17-10-2018 IPR011055 Duplicated hybrid motif BJD13_14545 86fa28a528211d146b48bb3dee0bcc3f 584 Pfam PF01551 Peptidase family M23 260 362 1.1E-17 T 17-10-2018 IPR016047 Peptidase M23 BJD13_14545 86fa28a528211d146b48bb3dee0bcc3f 584 Gene3D G3DSA:2.70.70.10 221 369 5.4E-17 T 17-10-2018 IPR011055 Duplicated hybrid motif BJD13_14545 86fa28a528211d146b48bb3dee0bcc3f 584 Gene3D G3DSA:1.10.530.70 10 191 4.5E-21 T 17-10-2018 BJD13_14545 86fa28a528211d146b48bb3dee0bcc3f 584 Pfam PF01471 Putative peptidoglycan binding domain 398 458 4.7E-16 T 17-10-2018 IPR002477 Peptidoglycan binding-like BJD13_14545 86fa28a528211d146b48bb3dee0bcc3f 584 SUPERFAMILY SSF53955 14 200 3.37E-40 T 17-10-2018 IPR023346 Lysozyme-like domain superfamily BJD13_14545 86fa28a528211d146b48bb3dee0bcc3f 584 SUPERFAMILY SSF47090 388 459 1.33E-17 T 17-10-2018 IPR036365 PGBD-like superfamily BJD13_08180 dfe6586af937907d68aba1942f739ba0 176 SUPERFAMILY SSF81342 7 175 1.1E-28 T 17-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 BJD13_08180 dfe6586af937907d68aba1942f739ba0 176 Pfam PF01292 Prokaryotic cytochrome b561 6 173 5.2E-22 T 17-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 BJD13_18285 3ffe111ea1428b99f043fe2a063fdc9b 193 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 131 165 2.9E-10 T 17-10-2018 IPR001451 Hexapeptide repeat BJD13_18285 3ffe111ea1428b99f043fe2a063fdc9b 193 Pfam PF12464 Maltose acetyltransferase 7 58 3.1E-11 T 17-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 BJD13_18285 3ffe111ea1428b99f043fe2a063fdc9b 193 Gene3D G3DSA:2.160.10.10 1 182 2.3E-64 T 17-10-2018 BJD13_18285 3ffe111ea1428b99f043fe2a063fdc9b 193 SMART SM01266 5 59 1.6E-17 T 17-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 BJD13_18285 3ffe111ea1428b99f043fe2a063fdc9b 193 SUPERFAMILY SSF51161 2 181 7.76E-53 T 17-10-2018 IPR011004 Trimeric LpxA-like superfamily BJD13_18285 3ffe111ea1428b99f043fe2a063fdc9b 193 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 139 167 - T 17-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 BJD13_10270 b50f9499af3e9e49241cecfbebb23bcb 651 SMART SM00388 281 349 3.6E-4 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_10270 b50f9499af3e9e49241cecfbebb23bcb 651 SMART SM00448 527 639 2.9E-26 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_10270 b50f9499af3e9e49241cecfbebb23bcb 651 SMART SM00448 5 119 2.3E-29 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_10270 b50f9499af3e9e49241cecfbebb23bcb 651 SMART SM00387 390 508 4.3E-25 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_10270 b50f9499af3e9e49241cecfbebb23bcb 651 Gene3D G3DSA:3.30.450.20 127 252 4.8E-14 T 17-10-2018 BJD13_10270 b50f9499af3e9e49241cecfbebb23bcb 651 PRINTS PR00344 Bacterial sensor protein C-terminal signature 468 486 3.2E-15 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_10270 b50f9499af3e9e49241cecfbebb23bcb 651 PRINTS PR00344 Bacterial sensor protein C-terminal signature 492 505 3.2E-15 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_10270 b50f9499af3e9e49241cecfbebb23bcb 651 PRINTS PR00344 Bacterial sensor protein C-terminal signature 455 465 3.2E-15 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_10270 b50f9499af3e9e49241cecfbebb23bcb 651 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 451 3.2E-15 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_10270 b50f9499af3e9e49241cecfbebb23bcb 651 Pfam PF00512 His Kinase A (phospho-acceptor) domain 281 348 1.6E-6 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_10270 b50f9499af3e9e49241cecfbebb23bcb 651 SUPERFAMILY SSF55874 340 506 2.62E-36 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_10270 b50f9499af3e9e49241cecfbebb23bcb 651 Gene3D G3DSA:3.40.50.2300 519 650 2.2E-29 T 17-10-2018 BJD13_10270 b50f9499af3e9e49241cecfbebb23bcb 651 Gene3D G3DSA:3.40.50.2300 2 126 7.1E-29 T 17-10-2018 BJD13_10270 b50f9499af3e9e49241cecfbebb23bcb 651 Pfam PF08448 PAS fold 143 242 3.4E-10 T 17-10-2018 IPR013656 PAS fold-4 BJD13_10270 b50f9499af3e9e49241cecfbebb23bcb 651 SUPERFAMILY SSF52172 3 139 5.55E-33 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_10270 b50f9499af3e9e49241cecfbebb23bcb 651 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 391 506 7.1E-19 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_10270 b50f9499af3e9e49241cecfbebb23bcb 651 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 134 247 1.2E-7 T 17-10-2018 IPR000014 PAS domain BJD13_10270 b50f9499af3e9e49241cecfbebb23bcb 651 Gene3D G3DSA:1.10.287.130 273 348 4.7E-17 T 17-10-2018 BJD13_10270 b50f9499af3e9e49241cecfbebb23bcb 651 Gene3D G3DSA:3.30.565.10 350 511 1.1E-40 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_10270 b50f9499af3e9e49241cecfbebb23bcb 651 Pfam PF00072 Response regulator receiver domain 7 119 4.4E-20 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_10270 b50f9499af3e9e49241cecfbebb23bcb 651 Pfam PF00072 Response regulator receiver domain 529 639 6.0E-19 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_10270 b50f9499af3e9e49241cecfbebb23bcb 651 SUPERFAMILY SSF47384 275 347 6.87E-9 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD13_10270 b50f9499af3e9e49241cecfbebb23bcb 651 SUPERFAMILY SSF55785 125 235 4.0E-12 T 17-10-2018 IPR035965 PAS domain superfamily BJD13_10270 b50f9499af3e9e49241cecfbebb23bcb 651 SUPERFAMILY SSF52172 526 645 1.25E-30 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_06560 f4eae897fc0ad7a3663868fa6e383065 1174 SUPERFAMILY SSF53756 890 1155 1.02E-9 T 17-10-2018 BJD13_06560 f4eae897fc0ad7a3663868fa6e383065 1174 SUPERFAMILY SSF53448 5 229 2.73E-35 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD13_06560 f4eae897fc0ad7a3663868fa6e383065 1174 SUPERFAMILY SSF53448 555 782 1.5E-29 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD13_06560 f4eae897fc0ad7a3663868fa6e383065 1174 Gene3D G3DSA:3.90.550.10 555 788 1.4E-27 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD13_06560 f4eae897fc0ad7a3663868fa6e383065 1174 Pfam PF00535 Glycosyl transferase family 2 7 124 5.0E-17 T 17-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BJD13_06560 f4eae897fc0ad7a3663868fa6e383065 1174 Pfam PF00535 Glycosyl transferase family 2 569 743 3.4E-12 T 17-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BJD13_06560 f4eae897fc0ad7a3663868fa6e383065 1174 Gene3D G3DSA:3.90.550.10 2 238 1.4E-28 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD13_06560 f4eae897fc0ad7a3663868fa6e383065 1174 Gene3D G3DSA:3.40.50.2000 999 1145 7.5E-8 T 17-10-2018 BJD13_09195 214eacb679a62f38090df441db0a6bed 387 Gene3D G3DSA:2.40.110.10 131 233 3.3E-33 T 17-10-2018 BJD13_09195 214eacb679a62f38090df441db0a6bed 387 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 134 146 - T 17-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 BJD13_09195 214eacb679a62f38090df441db0a6bed 387 Gene3D G3DSA:1.10.540.10 1 129 3.2E-39 T 17-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 BJD13_09195 214eacb679a62f38090df441db0a6bed 387 SUPERFAMILY SSF47203 238 385 1.03E-39 T 17-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 BJD13_09195 214eacb679a62f38090df441db0a6bed 387 SUPERFAMILY SSF56645 6 233 2.62E-73 T 17-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 BJD13_09195 214eacb679a62f38090df441db0a6bed 387 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 234 381 1.4E-30 T 17-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 BJD13_09195 214eacb679a62f38090df441db0a6bed 387 Gene3D G3DSA:1.20.140.10 235 387 5.7E-38 T 17-10-2018 BJD13_09195 214eacb679a62f38090df441db0a6bed 387 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 132 222 2.0E-21 T 17-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 BJD13_09195 214eacb679a62f38090df441db0a6bed 387 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 16 127 1.7E-32 T 17-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 BJD13_07825 8ff8fed981260b534dcf4a3ab67c1977 269 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 9 254 2.8E-86 T 17-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BJD13_07825 8ff8fed981260b534dcf4a3ab67c1977 269 SUPERFAMILY SSF53613 9 263 6.08E-74 T 17-10-2018 IPR029056 Ribokinase-like BJD13_07825 8ff8fed981260b534dcf4a3ab67c1977 269 Gene3D G3DSA:3.40.1190.20 2 265 8.0E-92 T 17-10-2018 IPR029056 Ribokinase-like BJD13_07825 8ff8fed981260b534dcf4a3ab67c1977 269 Pfam PF08543 Phosphomethylpyrimidine kinase 16 255 2.4E-85 T 17-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 BJD13_13015 5210d8d046c89cb5fd4f192aac687e69 174 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 6.0E-59 T 17-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 BJD13_13015 5210d8d046c89cb5fd4f192aac687e69 174 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 153 84.362 T 17-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 BJD13_13015 5210d8d046c89cb5fd4f192aac687e69 174 Pfam PF03477 ATP cone domain 50 136 4.1E-14 T 17-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 BJD13_13755 dbd25ce096d54d530b6598350488b2e0 299 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 279 4.0E-23 T 17-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BJD13_13755 dbd25ce096d54d530b6598350488b2e0 299 Gene3D G3DSA:3.50.50.60 4 288 4.2E-90 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_13755 dbd25ce096d54d530b6598350488b2e0 299 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 124 136 5.7E-14 T 17-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BJD13_13755 dbd25ce096d54d530b6598350488b2e0 299 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 257 275 5.7E-14 T 17-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BJD13_13755 dbd25ce096d54d530b6598350488b2e0 299 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 102 110 5.7E-14 T 17-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BJD13_13755 dbd25ce096d54d530b6598350488b2e0 299 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 4 26 5.7E-14 T 17-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BJD13_13755 dbd25ce096d54d530b6598350488b2e0 299 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 2.9E-12 T 17-10-2018 BJD13_13755 dbd25ce096d54d530b6598350488b2e0 299 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 247 269 2.9E-12 T 17-10-2018 BJD13_13755 dbd25ce096d54d530b6598350488b2e0 299 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 101 119 2.9E-12 T 17-10-2018 BJD13_13755 dbd25ce096d54d530b6598350488b2e0 299 SUPERFAMILY SSF51905 1 288 6.74E-29 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_13755 dbd25ce096d54d530b6598350488b2e0 299 Gene3D G3DSA:3.50.50.60 115 224 4.2E-90 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_07170 acad0852286ba242801fa18c517443b2 528 Pfam PF16371 N terminal of Calcineurin-like phosphoesterase 41 102 8.9E-10 T 17-10-2018 IPR032285 Calcineurin-like phosphoesterase, N-terminal BJD13_07170 acad0852286ba242801fa18c517443b2 528 Gene3D G3DSA:3.60.21.10 170 357 8.7E-15 T 17-10-2018 IPR029052 Metallo-dependent phosphatase-like BJD13_07170 acad0852286ba242801fa18c517443b2 528 Pfam PF00149 Calcineurin-like phosphoesterase 176 328 7.5E-6 T 17-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 BJD13_07170 acad0852286ba242801fa18c517443b2 528 Pfam PF16370 C terminal of Calcineurin-like phosphoesterase 348 514 3.9E-37 T 17-10-2018 IPR032288 Calcineurin-like phosphoesterase, C-terminal BJD13_07170 acad0852286ba242801fa18c517443b2 528 SUPERFAMILY SSF56300 138 400 3.01E-32 T 17-10-2018 BJD13_22740 e79f340774c8d6392d4b74bddf891cee 464 SUPERFAMILY SSF46689 355 464 1.7E-13 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_22740 e79f340774c8d6392d4b74bddf891cee 464 Gene3D G3DSA:3.40.50.2300 1 129 4.9E-34 T 17-10-2018 BJD13_22740 e79f340774c8d6392d4b74bddf891cee 464 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 444 464 3.6E-10 T 17-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD13_22740 e79f340774c8d6392d4b74bddf891cee 464 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 427 444 3.6E-10 T 17-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD13_22740 e79f340774c8d6392d4b74bddf891cee 464 SUPERFAMILY SSF52540 142 383 3.19E-66 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_22740 e79f340774c8d6392d4b74bddf891cee 464 SMART SM00448 5 116 1.0E-33 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_22740 e79f340774c8d6392d4b74bddf891cee 464 Gene3D G3DSA:3.40.50.300 134 311 9.9E-61 T 17-10-2018 BJD13_22740 e79f340774c8d6392d4b74bddf891cee 464 Pfam PF02954 Bacterial regulatory protein, Fis family 421 461 1.2E-14 T 17-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD13_22740 e79f340774c8d6392d4b74bddf891cee 464 SUPERFAMILY SSF52172 4 184 8.4E-42 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_22740 e79f340774c8d6392d4b74bddf891cee 464 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 227 242 - T 17-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BJD13_22740 e79f340774c8d6392d4b74bddf891cee 464 Pfam PF00158 Sigma-54 interaction domain 142 307 2.1E-66 T 17-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 BJD13_22740 e79f340774c8d6392d4b74bddf891cee 464 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 17-10-2018 IPR025944 Sigma-54 interaction domain, conserved site BJD13_22740 e79f340774c8d6392d4b74bddf891cee 464 SMART SM00382 161 304 2.8E-8 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_22740 e79f340774c8d6392d4b74bddf891cee 464 Pfam PF00072 Response regulator receiver domain 8 114 8.8E-29 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_22740 e79f340774c8d6392d4b74bddf891cee 464 Gene3D G3DSA:1.10.8.60 312 388 3.4E-21 T 17-10-2018 BJD13_22740 e79f340774c8d6392d4b74bddf891cee 464 Gene3D G3DSA:1.10.10.60 401 464 4.1E-16 T 17-10-2018 BJD13_22740 e79f340774c8d6392d4b74bddf891cee 464 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 165 178 - T 17-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BJD13_11795 245802e961753b40a5362c89d9cab0ea 127 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 17-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_11795 245802e961753b40a5362c89d9cab0ea 127 SUPERFAMILY SSF64263 1 119 3.66E-50 T 17-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_11795 245802e961753b40a5362c89d9cab0ea 127 Gene3D G3DSA:3.90.1030.10 1 117 6.5E-46 T 17-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_11795 245802e961753b40a5362c89d9cab0ea 127 Pfam PF01196 Ribosomal protein L17 20 116 1.1E-32 T 17-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_11795 245802e961753b40a5362c89d9cab0ea 127 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.193 T 17-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_11795 245802e961753b40a5362c89d9cab0ea 127 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 4.5E-46 T 17-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_22700 47feed9ed1b64bfafc025ffb04b99de6 130 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 27 8.5E-12 T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD13_22700 47feed9ed1b64bfafc025ffb04b99de6 130 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 1.7E-10 T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD13_22700 47feed9ed1b64bfafc025ffb04b99de6 130 SUPERFAMILY SSF54523 7 129 4.66E-25 T 17-10-2018 BJD13_22700 47feed9ed1b64bfafc025ffb04b99de6 130 Gene3D G3DSA:3.30.700.10 7 130 1.8E-29 T 17-10-2018 BJD13_22700 47feed9ed1b64bfafc025ffb04b99de6 130 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD13_22700 47feed9ed1b64bfafc025ffb04b99de6 130 Pfam PF00114 Pilin (bacterial filament) 35 129 2.1E-23 T 17-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 BJD13_07575 6107b9cf97f81c3bed8530aeb527de9b 421 PIRSF PIRSF004640 12 419 8.7E-125 T 17-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 BJD13_07575 6107b9cf97f81c3bed8530aeb527de9b 421 Gene3D G3DSA:3.20.20.20 16 302 3.7E-94 T 17-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BJD13_07575 6107b9cf97f81c3bed8530aeb527de9b 421 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 19 409 2.1E-116 T 17-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 BJD13_07575 6107b9cf97f81c3bed8530aeb527de9b 421 Gene3D G3DSA:3.30.413.10 303 420 1.3E-35 T 17-10-2018 BJD13_07575 6107b9cf97f81c3bed8530aeb527de9b 421 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 17 411 28.976 T 17-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 BJD13_07575 6107b9cf97f81c3bed8530aeb527de9b 421 Pfam PF04551 GcpE protein 22 409 9.7E-108 T 17-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 BJD13_15230 072ff1b9fb92f4e9a7bb7943ffb63820 612 Gene3D G3DSA:3.50.30.80 419 571 7.1E-55 T 17-10-2018 BJD13_15230 072ff1b9fb92f4e9a7bb7943ffb63820 612 SUPERFAMILY SSF143975 4 418 1.02E-133 T 17-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 BJD13_15230 072ff1b9fb92f4e9a7bb7943ffb63820 612 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 507 518 - T 17-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 BJD13_15230 072ff1b9fb92f4e9a7bb7943ffb63820 612 Pfam PF00920 Dehydratase family 34 603 6.2E-217 T 17-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 BJD13_15230 072ff1b9fb92f4e9a7bb7943ffb63820 612 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 606 9.2E-249 T 17-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 BJD13_15230 072ff1b9fb92f4e9a7bb7943ffb63820 612 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 17-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 BJD13_15230 072ff1b9fb92f4e9a7bb7943ffb63820 612 SUPERFAMILY SSF52016 419 607 1.41E-60 T 17-10-2018 BJD13_15230 072ff1b9fb92f4e9a7bb7943ffb63820 612 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 606 44.706 T 17-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 BJD13_19345 72c28a7ee803a88e469079cef0d890fd 1334 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 486 876 2.1E-120 T 17-10-2018 IPR010071 Amino acid adenylation domain BJD13_19345 72c28a7ee803a88e469079cef0d890fd 1334 Gene3D G3DSA:3.30.300.30 847 953 8.6E-33 T 17-10-2018 BJD13_19345 72c28a7ee803a88e469079cef0d890fd 1334 Gene3D G3DSA:3.30.559.10 11 207 3.5E-49 T 17-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BJD13_19345 72c28a7ee803a88e469079cef0d890fd 1334 SUPERFAMILY SSF56801 422 975 2.75E-147 T 17-10-2018 BJD13_19345 72c28a7ee803a88e469079cef0d890fd 1334 Pfam PF00668 Condensation domain 8 444 5.2E-60 T 17-10-2018 IPR001242 Condensation domain BJD13_19345 72c28a7ee803a88e469079cef0d890fd 1334 SUPERFAMILY SSF52777 190 451 2.89E-40 T 17-10-2018 BJD13_19345 72c28a7ee803a88e469079cef0d890fd 1334 ProSitePatterns PS00012 Phosphopantetheine attachment site. 986 1001 - T 17-10-2018 IPR006162 Phosphopantetheine attachment site BJD13_19345 72c28a7ee803a88e469079cef0d890fd 1334 SUPERFAMILY SSF47336 955 1027 4.71E-20 T 17-10-2018 IPR036736 ACP-like superfamily BJD13_19345 72c28a7ee803a88e469079cef0d890fd 1334 Pfam PF00501 AMP-binding enzyme 474 852 4.8E-84 T 17-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BJD13_19345 72c28a7ee803a88e469079cef0d890fd 1334 Pfam PF13193 AMP-binding enzyme C-terminal domain 860 937 1.6E-10 T 17-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BJD13_19345 72c28a7ee803a88e469079cef0d890fd 1334 Gene3D G3DSA:3.30.559.30 219 436 4.4E-56 T 17-10-2018 BJD13_19345 72c28a7ee803a88e469079cef0d890fd 1334 SUPERFAMILY SSF52777 11 184 2.67E-33 T 17-10-2018 BJD13_19345 72c28a7ee803a88e469079cef0d890fd 1334 SUPERFAMILY SSF53474 1030 1305 8.44E-52 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_19345 72c28a7ee803a88e469079cef0d890fd 1334 SMART SM00824 Thioesterase 1055 1307 2.9E-6 T 17-10-2018 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 BJD13_19345 72c28a7ee803a88e469079cef0d890fd 1334 Pfam PF00550 Phosphopantetheine attachment site 963 1027 1.7E-15 T 17-10-2018 IPR009081 Phosphopantetheine binding ACP domain BJD13_19345 72c28a7ee803a88e469079cef0d890fd 1334 SMART SM00823 Phosphopantetheine attachment site 962 1031 1.2E-5 T 17-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BJD13_19345 72c28a7ee803a88e469079cef0d890fd 1334 ProSitePatterns PS00455 Putative AMP-binding domain signature. 600 611 - T 17-10-2018 IPR020845 AMP-binding, conserved site BJD13_19345 72c28a7ee803a88e469079cef0d890fd 1334 Gene3D G3DSA:3.40.50.1820 954 1308 8.7E-97 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_19345 72c28a7ee803a88e469079cef0d890fd 1334 Pfam PF00975 Thioesterase domain 1053 1295 6.3E-28 T 17-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 BJD13_19345 72c28a7ee803a88e469079cef0d890fd 1334 Gene3D G3DSA:3.40.50.12780 453 846 2.0E-117 T 17-10-2018 BJD13_09680 6665d4bd615b66155b79c832cf8f1064 277 Gene3D G3DSA:1.10.10.1320 7 107 9.4E-6 T 17-10-2018 BJD13_09680 6665d4bd615b66155b79c832cf8f1064 277 Pfam PF10099 Anti-sigma-K factor rskA 66 268 3.8E-25 T 17-10-2018 IPR018764 Anti-sigma K factor RskA GO:0005886|GO:0016021 BJD13_22085 2b95bdbf40e02274fe5774a9f4b66113 293 Pfam PF13371 Tetratricopeptide repeat 211 282 9.2E-19 T 17-10-2018 BJD13_22085 2b95bdbf40e02274fe5774a9f4b66113 293 Gene3D G3DSA:1.25.40.10 185 292 1.1E-10 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_22085 2b95bdbf40e02274fe5774a9f4b66113 293 Pfam PF13369 Transglutaminase-like superfamily 60 209 5.7E-45 T 17-10-2018 IPR032698 Protein SirB1, N-terminal Reactome: R-HSA-8951664|Reactome: R-HSA-983168 BJD13_22085 2b95bdbf40e02274fe5774a9f4b66113 293 SUPERFAMILY SSF48452 204 277 3.59E-10 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_19040 928c7bfd43966a5d2bb3e42c3b81860d 429 Gene3D G3DSA:1.10.240.10 197 299 1.0E-111 T 17-10-2018 BJD13_19040 928c7bfd43966a5d2bb3e42c3b81860d 429 SUPERFAMILY SSF52374 4 332 1.08E-77 T 17-10-2018 BJD13_19040 928c7bfd43966a5d2bb3e42c3b81860d 429 Gene3D G3DSA:3.40.50.620 4 332 1.0E-111 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD13_19040 928c7bfd43966a5d2bb3e42c3b81860d 429 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 1 332 1.8E-88 T 17-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 BJD13_19040 928c7bfd43966a5d2bb3e42c3b81860d 429 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 2 333 36.716 T 17-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 BJD13_19040 928c7bfd43966a5d2bb3e42c3b81860d 429 Pfam PF00579 tRNA synthetases class I (W and Y) 3 283 4.6E-55 T 17-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD13_19040 928c7bfd43966a5d2bb3e42c3b81860d 429 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 150 171 1.1E-20 T 17-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 BJD13_19040 928c7bfd43966a5d2bb3e42c3b81860d 429 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 202 212 1.1E-20 T 17-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 BJD13_19040 928c7bfd43966a5d2bb3e42c3b81860d 429 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 15 31 1.1E-20 T 17-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 BJD13_19040 928c7bfd43966a5d2bb3e42c3b81860d 429 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 67 86 1.1E-20 T 17-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 BJD13_19040 928c7bfd43966a5d2bb3e42c3b81860d 429 SUPERFAMILY SSF160113 353 402 5.23E-10 T 17-10-2018 IPR036913 YegP-like superfamily BJD13_12535 78e14aea5c941b0c5477adc53d5a25fc 423 SMART SM00387 322 422 5.1E-25 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_12535 78e14aea5c941b0c5477adc53d5a25fc 423 SUPERFAMILY SSF47384 197 275 3.14E-13 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD13_12535 78e14aea5c941b0c5477adc53d5a25fc 423 Pfam PF00512 His Kinase A (phospho-acceptor) domain 215 276 1.5E-11 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_12535 78e14aea5c941b0c5477adc53d5a25fc 423 Gene3D G3DSA:1.10.287.130 175 279 8.1E-16 T 17-10-2018 BJD13_12535 78e14aea5c941b0c5477adc53d5a25fc 423 Gene3D G3DSA:3.30.565.10 280 423 4.5E-33 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_12535 78e14aea5c941b0c5477adc53d5a25fc 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 423 1.1E-11 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_12535 78e14aea5c941b0c5477adc53d5a25fc 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 382 1.1E-11 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_12535 78e14aea5c941b0c5477adc53d5a25fc 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 404 1.1E-11 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_12535 78e14aea5c941b0c5477adc53d5a25fc 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 368 1.1E-11 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_12535 78e14aea5c941b0c5477adc53d5a25fc 423 SUPERFAMILY SSF55874 280 421 4.06E-33 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_12535 78e14aea5c941b0c5477adc53d5a25fc 423 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 328 421 1.7E-18 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_12535 78e14aea5c941b0c5477adc53d5a25fc 423 SMART SM00388 213 279 1.1E-13 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_03210 89be7c6f7b6f558cad7a9c3fcbc79f3f 503 Gene3D G3DSA:2.40.50.140 139 202 1.6E-19 T 17-10-2018 BJD13_03210 89be7c6f7b6f558cad7a9c3fcbc79f3f 503 SUPERFAMILY SSF54814 283 346 8.5E-15 T 17-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 BJD13_03210 89be7c6f7b6f558cad7a9c3fcbc79f3f 503 Pfam PF13184 NusA-like KH domain 234 301 1.4E-27 T 17-10-2018 IPR025249 KH domain, NusA-like GO:0003723 BJD13_03210 89be7c6f7b6f558cad7a9c3fcbc79f3f 503 Gene3D G3DSA:1.10.150.20 435 494 5.9E-19 T 17-10-2018 BJD13_03210 89be7c6f7b6f558cad7a9c3fcbc79f3f 503 Gene3D G3DSA:3.30.1480.10 1 133 2.6E-40 T 17-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 BJD13_03210 89be7c6f7b6f558cad7a9c3fcbc79f3f 503 SUPERFAMILY SSF50249 135 203 7.8E-19 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD13_03210 89be7c6f7b6f558cad7a9c3fcbc79f3f 503 SUPERFAMILY SSF47794 433 493 1.73E-9 T 17-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 BJD13_03210 89be7c6f7b6f558cad7a9c3fcbc79f3f 503 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 414 29.494 T 17-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 BJD13_03210 89be7c6f7b6f558cad7a9c3fcbc79f3f 503 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 347 3.4E-126 T 17-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 BJD13_03210 89be7c6f7b6f558cad7a9c3fcbc79f3f 503 SMART SM00316 137 204 5.5E-8 T 17-10-2018 IPR022967 RNA-binding domain, S1 BJD13_03210 89be7c6f7b6f558cad7a9c3fcbc79f3f 503 Gene3D G3DSA:3.30.300.20 282 350 1.3E-24 T 17-10-2018 IPR015946 K homology domain-like, alpha/beta BJD13_03210 89be7c6f7b6f558cad7a9c3fcbc79f3f 503 SMART SM00322 234 297 21.0 T 17-10-2018 IPR004087 K Homology domain GO:0003676 BJD13_03210 89be7c6f7b6f558cad7a9c3fcbc79f3f 503 SMART SM00322 305 368 0.013 T 17-10-2018 IPR004087 K Homology domain GO:0003676 BJD13_03210 89be7c6f7b6f558cad7a9c3fcbc79f3f 503 Gene3D G3DSA:1.10.150.20 356 425 8.8E-27 T 17-10-2018 BJD13_03210 89be7c6f7b6f558cad7a9c3fcbc79f3f 503 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 369 418 2.2E-22 T 17-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication BJD13_03210 89be7c6f7b6f558cad7a9c3fcbc79f3f 503 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 444 494 3.0E-18 T 17-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication BJD13_03210 89be7c6f7b6f558cad7a9c3fcbc79f3f 503 SUPERFAMILY SSF69705 1 130 2.09E-37 T 17-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 BJD13_03210 89be7c6f7b6f558cad7a9c3fcbc79f3f 503 SUPERFAMILY SSF47794 360 419 6.44E-16 T 17-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 BJD13_03210 89be7c6f7b6f558cad7a9c3fcbc79f3f 503 Gene3D G3DSA:3.30.300.20 203 281 4.6E-30 T 17-10-2018 IPR015946 K homology domain-like, alpha/beta BJD13_03210 89be7c6f7b6f558cad7a9c3fcbc79f3f 503 SUPERFAMILY SSF54814 205 282 3.92E-29 T 17-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 BJD13_03210 89be7c6f7b6f558cad7a9c3fcbc79f3f 503 Pfam PF08529 NusA N-terminal domain 4 128 1.1E-35 T 17-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 BJD13_03210 89be7c6f7b6f558cad7a9c3fcbc79f3f 503 Pfam PF14520 Helix-hairpin-helix domain 436 492 2.4E-7 T 17-10-2018 BJD13_03210 89be7c6f7b6f558cad7a9c3fcbc79f3f 503 Pfam PF00575 S1 RNA binding domain 135 199 1.6E-7 T 17-10-2018 IPR003029 S1 domain GO:0003676 BJD13_23200 7579f4ca6e96af7fddd2235b35299f68 224 SUPERFAMILY SSF52402 1 221 3.31E-63 T 17-10-2018 BJD13_23200 7579f4ca6e96af7fddd2235b35299f68 224 Pfam PF06508 Queuosine biosynthesis protein QueC 3 212 5.1E-76 T 17-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 BJD13_23200 7579f4ca6e96af7fddd2235b35299f68 224 PIRSF PIRSF006293 1 223 2.4E-77 T 17-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 BJD13_23200 7579f4ca6e96af7fddd2235b35299f68 224 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 218 56.09 T 17-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 BJD13_23200 7579f4ca6e96af7fddd2235b35299f68 224 Gene3D G3DSA:3.40.50.620 1 221 3.7E-72 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD13_23200 7579f4ca6e96af7fddd2235b35299f68 224 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 205 5.3E-57 T 17-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 BJD13_10110 fdbc9982958c73cd55b31027ae8fc4a3 363 SUPERFAMILY SSF140959 2 343 3.61E-67 T 17-10-2018 IPR037217 Tryptophan/Indoleamine 2,3-dioxygenase-like GO:0019441|GO:0020037|GO:0046872 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 BJD13_10110 fdbc9982958c73cd55b31027ae8fc4a3 363 Gene3D G3DSA:1.20.58.480 222 354 5.1E-29 T 17-10-2018 BJD13_10110 fdbc9982958c73cd55b31027ae8fc4a3 363 Gene3D G3DSA:1.20.58.480 1 221 4.1E-52 T 17-10-2018 BJD13_10110 fdbc9982958c73cd55b31027ae8fc4a3 363 Hamap MF_01972 Tryptophan 2,3-dioxygenase [kynA]. 1 343 31.922 T 17-10-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 BJD13_10110 fdbc9982958c73cd55b31027ae8fc4a3 363 Pfam PF03301 Tryptophan 2,3-dioxygenase 1 343 1.8E-57 T 17-10-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 BJD13_03595 b436330f0ba98eead306d9ebd346cdcc 398 Gene3D G3DSA:3.40.50.2000 206 361 1.4E-148 T 17-10-2018 BJD13_03595 b436330f0ba98eead306d9ebd346cdcc 398 Gene3D G3DSA:3.40.50.11010 18 367 1.4E-148 T 17-10-2018 BJD13_03595 b436330f0ba98eead306d9ebd346cdcc 398 SUPERFAMILY SSF53756 80 371 1.94E-11 T 17-10-2018 BJD13_02855 b99d572e1f6aea8afdfd55b0cf55ce52 180 Gene3D G3DSA:3.90.1720.10 26 173 8.0E-40 T 17-10-2018 BJD13_02855 b99d572e1f6aea8afdfd55b0cf55ce52 180 Pfam PF00877 NlpC/P60 family 70 175 9.8E-28 T 17-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain BJD13_02855 b99d572e1f6aea8afdfd55b0cf55ce52 180 SUPERFAMILY SSF54001 49 179 9.57E-40 T 17-10-2018 IPR038765 Papain-like cysteine peptidase superfamily BJD13_17080 31cf1b1f1416af2684de741f986bad06 582 SUPERFAMILY SSF55785 178 299 4.19E-14 T 17-10-2018 IPR035965 PAS domain superfamily BJD13_17080 31cf1b1f1416af2684de741f986bad06 582 Pfam PF08448 PAS fold 326 426 2.2E-9 T 17-10-2018 IPR013656 PAS fold-4 BJD13_17080 31cf1b1f1416af2684de741f986bad06 582 SUPERFAMILY SSF55073 440 575 1.18E-27 T 17-10-2018 IPR029787 Nucleotide cyclase BJD13_17080 31cf1b1f1416af2684de741f986bad06 582 Pfam PF00990 Diguanylate cyclase, GGDEF domain 436 574 2.3E-24 T 17-10-2018 IPR000160 GGDEF domain BJD13_17080 31cf1b1f1416af2684de741f986bad06 582 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 310 431 1.9E-15 T 17-10-2018 IPR000014 PAS domain BJD13_17080 31cf1b1f1416af2684de741f986bad06 582 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 434 575 1.2E-25 T 17-10-2018 IPR000160 GGDEF domain BJD13_17080 31cf1b1f1416af2684de741f986bad06 582 SUPERFAMILY SSF55785 298 422 2.26E-20 T 17-10-2018 IPR035965 PAS domain superfamily BJD13_17080 31cf1b1f1416af2684de741f986bad06 582 SMART SM00065 30 173 2.8E-6 T 17-10-2018 IPR003018 GAF domain GO:0005515 BJD13_17080 31cf1b1f1416af2684de741f986bad06 582 SMART SM00086 384 424 63.0 T 17-10-2018 IPR001610 PAC motif BJD13_17080 31cf1b1f1416af2684de741f986bad06 582 SMART SM00086 261 301 0.2 T 17-10-2018 IPR001610 PAC motif BJD13_17080 31cf1b1f1416af2684de741f986bad06 582 SUPERFAMILY SSF55781 33 172 6.54E-22 T 17-10-2018 BJD13_17080 31cf1b1f1416af2684de741f986bad06 582 Gene3D G3DSA:3.30.450.20 299 422 4.0E-19 T 17-10-2018 BJD13_17080 31cf1b1f1416af2684de741f986bad06 582 SMART SM00091 313 379 6.4E-9 T 17-10-2018 IPR000014 PAS domain BJD13_17080 31cf1b1f1416af2684de741f986bad06 582 Gene3D G3DSA:3.30.450.20 180 297 3.4E-14 T 17-10-2018 BJD13_17080 31cf1b1f1416af2684de741f986bad06 582 Pfam PF01590 GAF domain 56 160 4.1E-7 T 17-10-2018 IPR003018 GAF domain GO:0005515 BJD13_17080 31cf1b1f1416af2684de741f986bad06 582 Gene3D G3DSA:3.30.70.270 423 577 4.3E-32 T 17-10-2018 BJD13_17080 31cf1b1f1416af2684de741f986bad06 582 SMART SM00267 424 580 8.2E-17 T 17-10-2018 IPR000160 GGDEF domain BJD13_17080 31cf1b1f1416af2684de741f986bad06 582 Gene3D G3DSA:3.30.450.40 10 179 1.3E-14 T 17-10-2018 IPR029016 GAF-like domain superfamily BJD13_03020 1659c20193820092b5ecbbd0b2ef612a 341 Gene3D G3DSA:3.30.360.10 132 321 1.2E-146 T 17-10-2018 BJD13_03020 1659c20193820092b5ecbbd0b2ef612a 341 SMART SM00859 9 124 1.2E-46 T 17-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 BJD13_03020 1659c20193820092b5ecbbd0b2ef612a 341 PIRSF PIRSF000148 7 341 2.7E-134 T 17-10-2018 BJD13_03020 1659c20193820092b5ecbbd0b2ef612a 341 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 9 123 1.9E-32 T 17-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 BJD13_03020 1659c20193820092b5ecbbd0b2ef612a 341 Gene3D G3DSA:3.40.50.720 10 336 1.2E-146 T 17-10-2018 BJD13_03020 1659c20193820092b5ecbbd0b2ef612a 341 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 143 324 4.3E-59 T 17-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BJD13_03020 1659c20193820092b5ecbbd0b2ef612a 341 SUPERFAMILY SSF55347 133 325 2.76E-75 T 17-10-2018 BJD13_03020 1659c20193820092b5ecbbd0b2ef612a 341 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 9 338 4.9E-136 T 17-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BJD13_03020 1659c20193820092b5ecbbd0b2ef612a 341 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 7 338 38.499 T 17-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BJD13_03020 1659c20193820092b5ecbbd0b2ef612a 341 SUPERFAMILY SSF51735 8 161 2.78E-51 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_23910 899d8ee99cc46f12167809337858ff93 123 PIRSF PIRSF002070 1 123 3.1E-15 T 17-10-2018 BJD13_23910 899d8ee99cc46f12167809337858ff93 123 Gene3D G3DSA:2.40.50.140 1 119 1.9E-16 T 17-10-2018 BJD13_23910 899d8ee99cc46f12167809337858ff93 123 SUPERFAMILY SSF50249 4 110 2.36E-15 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD13_23910 899d8ee99cc46f12167809337858ff93 123 Pfam PF00436 Single-strand binding protein family 2 102 8.5E-11 T 17-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 BJD13_03775 8fd3cede1de6053f52d7b6670ba10ba1 528 PIRSF PIRSF006060 1 457 4.0E-74 T 17-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BJD13_03775 8fd3cede1de6053f52d7b6670ba10ba1 528 PIRSF PIRSF006060 429 526 51.0 T 17-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BJD13_03775 8fd3cede1de6053f52d7b6670ba10ba1 528 Pfam PF13520 Amino acid permease 16 427 7.7E-43 T 17-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BJD13_03775 8fd3cede1de6053f52d7b6670ba10ba1 528 Gene3D G3DSA:1.20.1740.10 11 465 8.2E-76 T 17-10-2018 BJD13_22295 3b9cf8704785fee372866facb5df1883 666 ProSitePatterns PS00801 Transketolase signature 1. 14 34 - T 17-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BJD13_22295 3b9cf8704785fee372866facb5df1883 666 SUPERFAMILY SSF52518 348 529 1.3E-63 T 17-10-2018 IPR029061 Thiamin diphosphate-binding fold BJD13_22295 3b9cf8704785fee372866facb5df1883 666 Gene3D G3DSA:3.40.50.970 329 540 2.8E-75 T 17-10-2018 BJD13_22295 3b9cf8704785fee372866facb5df1883 666 ProSitePatterns PS00802 Transketolase signature 2. 470 486 - T 17-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BJD13_22295 3b9cf8704785fee372866facb5df1883 666 Gene3D G3DSA:3.40.50.920 542 666 8.1E-44 T 17-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BJD13_22295 3b9cf8704785fee372866facb5df1883 666 SUPERFAMILY SSF52518 6 329 2.44E-120 T 17-10-2018 IPR029061 Thiamin diphosphate-binding fold BJD13_22295 3b9cf8704785fee372866facb5df1883 666 SMART SM00861 357 529 1.1E-63 T 17-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BJD13_22295 3b9cf8704785fee372866facb5df1883 666 Pfam PF02780 Transketolase, C-terminal domain 553 659 7.7E-18 T 17-10-2018 IPR033248 Transketolase, C-terminal domain BJD13_22295 3b9cf8704785fee372866facb5df1883 666 SUPERFAMILY SSF52922 536 666 8.64E-43 T 17-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BJD13_22295 3b9cf8704785fee372866facb5df1883 666 Pfam PF02779 Transketolase, pyrimidine binding domain 356 528 1.9E-43 T 17-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BJD13_22295 3b9cf8704785fee372866facb5df1883 666 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 6 336 8.7E-154 T 17-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BJD13_22295 3b9cf8704785fee372866facb5df1883 666 TIGRFAM TIGR00232 tktlase_bact: transketolase 8 666 4.6E-285 T 17-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 BJD13_22295 3b9cf8704785fee372866facb5df1883 666 Gene3D G3DSA:3.40.50.970 5 328 8.1E-131 T 17-10-2018 BJD13_03700 ac860565e66116e41b2d23fc4717fbb4 540 Gene3D G3DSA:3.30.565.10 232 403 3.5E-40 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_03700 ac860565e66116e41b2d23fc4717fbb4 540 SMART SM00448 416 529 3.7E-20 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_03700 ac860565e66116e41b2d23fc4717fbb4 540 Pfam PF13426 PAS domain 49 143 4.4E-21 T 17-10-2018 IPR000014 PAS domain BJD13_03700 ac860565e66116e41b2d23fc4717fbb4 540 SMART SM00387 271 396 6.2E-24 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_03700 ac860565e66116e41b2d23fc4717fbb4 540 SMART SM00091 28 97 5.7E-5 T 17-10-2018 IPR000014 PAS domain BJD13_03700 ac860565e66116e41b2d23fc4717fbb4 540 PRINTS PR00344 Bacterial sensor protein C-terminal signature 325 339 5.4E-16 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_03700 ac860565e66116e41b2d23fc4717fbb4 540 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 393 5.4E-16 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_03700 ac860565e66116e41b2d23fc4717fbb4 540 PRINTS PR00344 Bacterial sensor protein C-terminal signature 356 374 5.4E-16 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_03700 ac860565e66116e41b2d23fc4717fbb4 540 PRINTS PR00344 Bacterial sensor protein C-terminal signature 343 353 5.4E-16 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_03700 ac860565e66116e41b2d23fc4717fbb4 540 SUPERFAMILY SSF52172 415 534 3.84E-27 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_03700 ac860565e66116e41b2d23fc4717fbb4 540 SMART SM00388 160 230 2.3E-4 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_03700 ac860565e66116e41b2d23fc4717fbb4 540 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 277 394 1.4E-18 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_03700 ac860565e66116e41b2d23fc4717fbb4 540 Gene3D G3DSA:1.10.287.130 157 229 3.3E-17 T 17-10-2018 BJD13_03700 ac860565e66116e41b2d23fc4717fbb4 540 SMART SM00086 103 145 2.5E-8 T 17-10-2018 IPR001610 PAC motif BJD13_03700 ac860565e66116e41b2d23fc4717fbb4 540 SUPERFAMILY SSF55785 35 145 2.44E-27 T 17-10-2018 IPR035965 PAS domain superfamily BJD13_03700 ac860565e66116e41b2d23fc4717fbb4 540 SUPERFAMILY SSF47384 151 227 3.53E-7 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD13_03700 ac860565e66116e41b2d23fc4717fbb4 540 Gene3D G3DSA:3.40.50.2300 414 536 1.5E-28 T 17-10-2018 BJD13_03700 ac860565e66116e41b2d23fc4717fbb4 540 SUPERFAMILY SSF55874 220 394 2.1E-34 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_03700 ac860565e66116e41b2d23fc4717fbb4 540 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 27 152 4.2E-17 T 17-10-2018 IPR000014 PAS domain BJD13_03700 ac860565e66116e41b2d23fc4717fbb4 540 Gene3D G3DSA:3.30.450.20 27 156 2.1E-43 T 17-10-2018 BJD13_03700 ac860565e66116e41b2d23fc4717fbb4 540 Pfam PF00072 Response regulator receiver domain 418 530 3.5E-17 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_15175 535e994176e38be98cb87d3d7a957ed4 493 Gene3D G3DSA:3.40.605.10 23 478 2.3E-149 T 17-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 BJD13_15175 535e994176e38be98cb87d3d7a957ed4 493 Pfam PF00171 Aldehyde dehydrogenase family 26 481 6.9E-151 T 17-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 BJD13_15175 535e994176e38be98cb87d3d7a957ed4 493 Gene3D G3DSA:3.40.309.10 264 451 2.3E-149 T 17-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 BJD13_15175 535e994176e38be98cb87d3d7a957ed4 493 SUPERFAMILY SSF53720 12 484 5.5E-145 T 17-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BJD13_15175 535e994176e38be98cb87d3d7a957ed4 493 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 259 266 - T 17-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 BJD13_15175 535e994176e38be98cb87d3d7a957ed4 493 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 287 298 - T 17-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 BJD13_14165 98e42cca023965af7fb44f45edba59bb 937 Pfam PF07715 TonB-dependent Receptor Plug Domain 32 147 2.4E-21 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_14165 98e42cca023965af7fb44f45edba59bb 937 Pfam PF00593 TonB dependent receptor 337 929 4.4E-38 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_14165 98e42cca023965af7fb44f45edba59bb 937 Gene3D G3DSA:2.170.130.10 12 151 1.3E-32 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_14165 98e42cca023965af7fb44f45edba59bb 937 SUPERFAMILY SSF56935 17 937 1.25E-78 T 17-10-2018 BJD13_09070 8da16ecd71cfdc533d4ab7e052226cbf 815 SUPERFAMILY SSF53474 199 324 4.87E-9 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_09070 8da16ecd71cfdc533d4ab7e052226cbf 815 Gene3D G3DSA:3.40.50.200 471 815 1.7E-70 T 17-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BJD13_09070 8da16ecd71cfdc533d4ab7e052226cbf 815 PRINTS PR00723 Subtilisin serine protease family (S8) signature 753 769 5.2E-15 T 17-10-2018 IPR015500 Peptidase S8, subtilisin-related BJD13_09070 8da16ecd71cfdc533d4ab7e052226cbf 815 PRINTS PR00723 Subtilisin serine protease family (S8) signature 540 553 5.2E-15 T 17-10-2018 IPR015500 Peptidase S8, subtilisin-related BJD13_09070 8da16ecd71cfdc533d4ab7e052226cbf 815 PRINTS PR00723 Subtilisin serine protease family (S8) signature 485 504 5.2E-15 T 17-10-2018 IPR015500 Peptidase S8, subtilisin-related BJD13_09070 8da16ecd71cfdc533d4ab7e052226cbf 815 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 754 764 - T 17-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site BJD13_09070 8da16ecd71cfdc533d4ab7e052226cbf 815 Pfam PF00082 Subtilase family 491 799 9.9E-45 T 17-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 BJD13_09070 8da16ecd71cfdc533d4ab7e052226cbf 815 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 544 554 - T 17-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site BJD13_09070 8da16ecd71cfdc533d4ab7e052226cbf 815 Gene3D G3DSA:3.40.50.1820 193 346 3.7E-8 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_09070 8da16ecd71cfdc533d4ab7e052226cbf 815 SUPERFAMILY SSF52743 457 812 9.3E-59 T 17-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BJD13_09595 7dd889e74d4ac0258db8cb7905affcdd 258 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 58 236 7.8E-34 T 17-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 BJD13_09595 7dd889e74d4ac0258db8cb7905affcdd 258 Pfam PF02592 Putative vitamin uptake transporter 62 234 1.4E-41 T 17-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 BJD13_09595 7dd889e74d4ac0258db8cb7905affcdd 258 Hamap MF_02088 Probable queuosine precursor transporter. 9 247 15.78 T 17-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 BJD13_07920 d674b255ce6ce5e11836e638353edcdb 439 Pfam PF01926 50S ribosome-binding GTPase 200 318 1.6E-21 T 17-10-2018 IPR006073 GTP binding domain GO:0005525 BJD13_07920 d674b255ce6ce5e11836e638353edcdb 439 PIRSF PIRSF006809 3 424 1.3E-142 T 17-10-2018 IPR016496 GTPase HflX GO:0005525 BJD13_07920 d674b255ce6ce5e11836e638353edcdb 439 Pfam PF13167 GTP-binding GTPase N-terminal 26 112 1.9E-30 T 17-10-2018 IPR025121 GTPase HflX, N-terminal BJD13_07920 d674b255ce6ce5e11836e638353edcdb 439 Hamap MF_00900 GTPase HflX [hflX]. 27 394 47.918 T 17-10-2018 IPR016496 GTPase HflX GO:0005525 BJD13_07920 d674b255ce6ce5e11836e638353edcdb 439 Gene3D G3DSA:3.40.50.300 198 369 5.5E-41 T 17-10-2018 BJD13_07920 d674b255ce6ce5e11836e638353edcdb 439 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 199 358 1.3E-12 T 17-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BJD13_07920 d674b255ce6ce5e11836e638353edcdb 439 Gene3D G3DSA:3.40.50.11060 21 138 1.1E-37 T 17-10-2018 BJD13_07920 d674b255ce6ce5e11836e638353edcdb 439 SUPERFAMILY SSF52540 199 365 3.32E-43 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_07920 d674b255ce6ce5e11836e638353edcdb 439 Pfam PF16360 GTP-binding GTPase Middle Region 114 193 8.9E-27 T 17-10-2018 IPR032305 GTP-binding protein, middle domain BJD13_07920 d674b255ce6ce5e11836e638353edcdb 439 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 201 221 2.7E-12 T 17-10-2018 IPR006073 GTP binding domain GO:0005525 BJD13_07920 d674b255ce6ce5e11836e638353edcdb 439 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 222 240 2.7E-12 T 17-10-2018 IPR006073 GTP binding domain GO:0005525 BJD13_07920 d674b255ce6ce5e11836e638353edcdb 439 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 2.7E-12 T 17-10-2018 IPR006073 GTP binding domain GO:0005525 BJD13_07920 d674b255ce6ce5e11836e638353edcdb 439 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 11 364 9.5E-146 T 17-10-2018 IPR016496 GTPase HflX GO:0005525 BJD13_05435 b51126b2a8366764f66e07d679f96cb6 499 Pfam PF03354 Phage Terminase 45 484 5.8E-51 T 17-10-2018 IPR005021 Terminase large subunit, Lambdalikevirus-type BJD13_05435 b51126b2a8366764f66e07d679f96cb6 499 Gene3D G3DSA:3.40.50.300 3 206 5.8E-24 T 17-10-2018 BJD13_19610 8a255f6a8842a04295c546be9e23a294 392 Pfam PF07995 Glucose / Sorbosone dehydrogenase 48 373 3.6E-125 T 17-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase BJD13_19610 8a255f6a8842a04295c546be9e23a294 392 SUPERFAMILY SSF50952 25 372 5.23E-44 T 17-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 BJD13_19610 8a255f6a8842a04295c546be9e23a294 392 Gene3D G3DSA:2.120.10.30 36 383 1.7E-102 T 17-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like BJD13_13855 f2417b0f4bf10df73f26f9f7903bb51c 255 SUPERFAMILY SSF52317 57 239 2.65E-45 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD13_13855 f2417b0f4bf10df73f26f9f7903bb51c 255 Gene3D G3DSA:3.40.50.880 52 254 4.0E-66 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD13_13855 f2417b0f4bf10df73f26f9f7903bb51c 255 Pfam PF01965 DJ-1/PfpI family 59 220 2.1E-24 T 17-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 BJD13_23660 dc723af2b6ec6f1a93e052b486f8b5c0 296 Pfam PF01430 Hsp33 protein 5 273 4.3E-76 T 17-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 BJD13_23660 dc723af2b6ec6f1a93e052b486f8b5c0 296 Gene3D G3DSA:1.10.287.480 179 226 1.1E-9 T 17-10-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily BJD13_23660 dc723af2b6ec6f1a93e052b486f8b5c0 296 SUPERFAMILY SSF118352 226 284 1.83E-17 T 17-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 BJD13_23660 dc723af2b6ec6f1a93e052b486f8b5c0 296 SUPERFAMILY SSF64397 4 233 6.93E-58 T 17-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 BJD13_23660 dc723af2b6ec6f1a93e052b486f8b5c0 296 PIRSF PIRSF005261 1 286 1.1E-96 T 17-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 BJD13_23660 dc723af2b6ec6f1a93e052b486f8b5c0 296 Gene3D G3DSA:3.55.30.10 1 177 1.9E-49 T 17-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 BJD13_23660 dc723af2b6ec6f1a93e052b486f8b5c0 296 Gene3D G3DSA:3.90.1280.10 227 286 4.6E-19 T 17-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 BJD13_14420 2d868b43d982e21e1bdf378e8d3c5503 205 SUPERFAMILY SSF55811 7 151 1.14E-29 T 17-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BJD13_14420 2d868b43d982e21e1bdf378e8d3c5503 205 Gene3D G3DSA:3.90.79.10 1 160 5.8E-42 T 17-10-2018 BJD13_14420 2d868b43d982e21e1bdf378e8d3c5503 205 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 17-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 BJD13_14420 2d868b43d982e21e1bdf378e8d3c5503 205 Pfam PF00293 NUDIX domain 7 129 3.8E-24 T 17-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 BJD13_14420 2d868b43d982e21e1bdf378e8d3c5503 205 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 36.119 T 17-10-2018 IPR022927 RNA pyrophosphohydrolase RppH BJD13_14505 6d85a52d329e3af58a9ab4bc1e7e222a 309 SUPERFAMILY SSF111331 3 305 6.1E-67 T 17-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily BJD13_14505 6d85a52d329e3af58a9ab4bc1e7e222a 309 Hamap MF_01377 Probable lipid kinase YegS [yegS]. 5 308 44.608 T 17-10-2018 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 BJD13_14505 6d85a52d329e3af58a9ab4bc1e7e222a 309 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 6 301 1.9E-61 T 17-10-2018 IPR005218 Diacylglycerol/lipid kinase BJD13_14505 6d85a52d329e3af58a9ab4bc1e7e222a 309 TIGRFAM TIGR03702 lip_kinase_YegS: lipid kinase YegS 5 307 1.4E-139 T 17-10-2018 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 BJD13_14505 6d85a52d329e3af58a9ab4bc1e7e222a 309 Gene3D G3DSA:2.60.200.40 127 293 3.0E-77 T 17-10-2018 BJD13_14505 6d85a52d329e3af58a9ab4bc1e7e222a 309 Pfam PF00781 Diacylglycerol kinase catalytic domain 5 129 4.0E-26 T 17-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 BJD13_14505 6d85a52d329e3af58a9ab4bc1e7e222a 309 Gene3D G3DSA:3.40.50.10330 24 296 3.0E-77 T 17-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 BJD13_14505 6d85a52d329e3af58a9ab4bc1e7e222a 309 SMART SM00046 5 130 1.1E-18 T 17-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 BJD13_14660 b5ec2199685f28c7ae8883c77246551b 502 Gene3D G3DSA:2.40.50.100 5 79 2.0E-20 T 17-10-2018 BJD13_14660 b5ec2199685f28c7ae8883c77246551b 502 Pfam PF02817 e3 binding domain 168 202 8.5E-10 T 17-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 BJD13_14660 b5ec2199685f28c7ae8883c77246551b 502 SUPERFAMILY SSF51230 5 91 1.57E-23 T 17-10-2018 IPR011053 Single hybrid motif BJD13_14660 b5ec2199685f28c7ae8883c77246551b 502 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 295 494 1.7E-45 T 17-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 BJD13_14660 b5ec2199685f28c7ae8883c77246551b 502 SUPERFAMILY SSF47005 167 206 4.32E-9 T 17-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 BJD13_14660 b5ec2199685f28c7ae8883c77246551b 502 SUPERFAMILY SSF52777 285 498 8.9E-53 T 17-10-2018 BJD13_14660 b5ec2199685f28c7ae8883c77246551b 502 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 29 58 - T 17-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 BJD13_14660 b5ec2199685f28c7ae8883c77246551b 502 Pfam PF00364 Biotin-requiring enzyme 6 77 2.0E-17 T 17-10-2018 IPR000089 Biotin/lipoyl attachment BJD13_14660 b5ec2199685f28c7ae8883c77246551b 502 Gene3D G3DSA:4.10.320.10 167 207 1.7E-12 T 17-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 BJD13_14660 b5ec2199685f28c7ae8883c77246551b 502 Gene3D G3DSA:3.30.559.10 279 500 9.3E-49 T 17-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BJD13_22300 b3a8afb4e2f85d6d88b96cf4c3311ccc 727 Gene3D G3DSA:2.40.170.20 189 727 2.9E-156 T 17-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BJD13_22300 b3a8afb4e2f85d6d88b96cf4c3311ccc 727 Gene3D G3DSA:2.170.130.10 54 186 2.6E-40 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_22300 b3a8afb4e2f85d6d88b96cf4c3311ccc 727 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 79 727 1.0E-115 T 17-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 BJD13_22300 b3a8afb4e2f85d6d88b96cf4c3311ccc 727 Pfam PF07715 TonB-dependent Receptor Plug Domain 77 177 5.3E-17 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_22300 b3a8afb4e2f85d6d88b96cf4c3311ccc 727 SUPERFAMILY SSF56935 42 727 1.96E-121 T 17-10-2018 BJD13_22300 b3a8afb4e2f85d6d88b96cf4c3311ccc 727 Pfam PF00593 TonB dependent receptor 279 726 8.9E-48 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_04440 9dae110a84c4e82dd510f769f928d139 182 Gene3D G3DSA:3.10.640.10 1 182 2.8E-80 T 17-10-2018 IPR038590 YaeQ superfamily BJD13_04440 9dae110a84c4e82dd510f769f928d139 182 SMART SM01322 1 176 2.6E-110 T 17-10-2018 IPR009822 YaeQ BJD13_04440 9dae110a84c4e82dd510f769f928d139 182 PIRSF PIRSF011484 1 180 5.4E-64 T 17-10-2018 IPR009822 YaeQ BJD13_04440 9dae110a84c4e82dd510f769f928d139 182 SUPERFAMILY SSF52980 5 178 1.26E-68 T 17-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 BJD13_04440 9dae110a84c4e82dd510f769f928d139 182 Pfam PF07152 YaeQ protein 1 173 9.3E-72 T 17-10-2018 IPR009822 YaeQ BJD13_00205 7118fd11f8f7e59b72b11e7be21422ba 796 Pfam PF00122 E1-E2 ATPase 262 443 2.8E-53 T 17-10-2018 BJD13_00205 7118fd11f8f7e59b72b11e7be21422ba 796 Gene3D G3DSA:3.40.50.1000 445 715 1.8E-86 T 17-10-2018 IPR023214 HAD superfamily BJD13_00205 7118fd11f8f7e59b72b11e7be21422ba 796 Gene3D G3DSA:1.10.620.20 9 83 6.2E-6 T 17-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 BJD13_00205 7118fd11f8f7e59b72b11e7be21422ba 796 SUPERFAMILY SSF81653 269 362 1.44E-25 T 17-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 BJD13_00205 7118fd11f8f7e59b72b11e7be21422ba 796 Pfam PF04945 YHS domain 12 56 3.4E-13 T 17-10-2018 IPR007029 YHS domain BJD13_00205 7118fd11f8f7e59b72b11e7be21422ba 796 SUPERFAMILY SSF56784 462 770 5.07E-52 T 17-10-2018 IPR036412 HAD-like superfamily BJD13_00205 7118fd11f8f7e59b72b11e7be21422ba 796 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 233 756 2.0E-86 T 17-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 BJD13_00205 7118fd11f8f7e59b72b11e7be21422ba 796 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 189 772 8.1E-184 T 17-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 BJD13_00205 7118fd11f8f7e59b72b11e7be21422ba 796 Gene3D G3DSA:2.70.150.20 255 367 4.5E-43 T 17-10-2018 BJD13_00205 7118fd11f8f7e59b72b11e7be21422ba 796 SUPERFAMILY SSF81665 229 732 2.09E-13 T 17-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 BJD13_00205 7118fd11f8f7e59b72b11e7be21422ba 796 Pfam PF00702 haloacid dehalogenase-like hydrolase 460 677 1.6E-39 T 17-10-2018 BJD13_00205 7118fd11f8f7e59b72b11e7be21422ba 796 SUPERFAMILY SSF47240 15 56 1.41E-5 T 17-10-2018 IPR009078 Ferritin-like superfamily BJD13_00205 7118fd11f8f7e59b72b11e7be21422ba 796 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 170 772 1.7E-174 T 17-10-2018 BJD13_00205 7118fd11f8f7e59b72b11e7be21422ba 796 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 466 472 - T 17-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 BJD13_00205 7118fd11f8f7e59b72b11e7be21422ba 796 SMART SM00746 14 52 7.3E-8 T 17-10-2018 IPR011017 TRASH domain BJD13_00205 7118fd11f8f7e59b72b11e7be21422ba 796 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 588 599 6.6E-26 T 17-10-2018 BJD13_00205 7118fd11f8f7e59b72b11e7be21422ba 796 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 686 698 6.6E-26 T 17-10-2018 BJD13_00205 7118fd11f8f7e59b72b11e7be21422ba 796 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 464 478 6.6E-26 T 17-10-2018 BJD13_00205 7118fd11f8f7e59b72b11e7be21422ba 796 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 610 620 6.6E-26 T 17-10-2018 BJD13_00205 7118fd11f8f7e59b72b11e7be21422ba 796 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 312 326 6.6E-26 T 17-10-2018 BJD13_00205 7118fd11f8f7e59b72b11e7be21422ba 796 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 663 682 6.6E-26 T 17-10-2018 BJD13_00205 7118fd11f8f7e59b72b11e7be21422ba 796 PRINTS PR00943 Copper-transporting ATPase signature 174 193 5.1E-15 T 17-10-2018 BJD13_00205 7118fd11f8f7e59b72b11e7be21422ba 796 PRINTS PR00943 Copper-transporting ATPase signature 385 399 5.1E-15 T 17-10-2018 BJD13_00205 7118fd11f8f7e59b72b11e7be21422ba 796 PRINTS PR00943 Copper-transporting ATPase signature 251 269 5.1E-15 T 17-10-2018 BJD13_00205 7118fd11f8f7e59b72b11e7be21422ba 796 PRINTS PR00943 Copper-transporting ATPase signature 231 250 5.1E-15 T 17-10-2018 BJD13_00205 7118fd11f8f7e59b72b11e7be21422ba 796 PRINTS PR00943 Copper-transporting ATPase signature 447 462 5.1E-15 T 17-10-2018 BJD13_00205 7118fd11f8f7e59b72b11e7be21422ba 796 PRINTS PR00943 Copper-transporting ATPase signature 640 657 5.1E-15 T 17-10-2018 BJD13_00205 7118fd11f8f7e59b72b11e7be21422ba 796 Gene3D G3DSA:3.40.1110.10 475 595 1.8E-86 T 17-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 BJD13_09790 3469c9e7da7eeaa81d5f555a4052fda2 157 Gene3D G3DSA:2.40.10.330 71 121 2.0E-53 T 17-10-2018 BJD13_09790 3469c9e7da7eeaa81d5f555a4052fda2 157 Gene3D G3DSA:3.10.50.40 3 153 2.0E-53 T 17-10-2018 BJD13_09790 3469c9e7da7eeaa81d5f555a4052fda2 157 SUPERFAMILY SSF54534 3 140 9.04E-36 T 17-10-2018 BJD13_09790 3469c9e7da7eeaa81d5f555a4052fda2 157 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 3 136 1.1E-11 T 17-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain BJD13_06360 2781ed4279e95ce85b55b1e0e9c707be 920 Gene3D G3DSA:3.20.20.450 653 909 3.3E-92 T 17-10-2018 IPR035919 EAL domain superfamily BJD13_06360 2781ed4279e95ce85b55b1e0e9c707be 920 SUPERFAMILY SSF141868 657 905 1.96E-83 T 17-10-2018 IPR035919 EAL domain superfamily BJD13_06360 2781ed4279e95ce85b55b1e0e9c707be 920 SMART SM00091 229 296 0.19 T 17-10-2018 IPR000014 PAS domain BJD13_06360 2781ed4279e95ce85b55b1e0e9c707be 920 SMART SM00091 99 167 1.2E-6 T 17-10-2018 IPR000014 PAS domain BJD13_06360 2781ed4279e95ce85b55b1e0e9c707be 920 Gene3D G3DSA:3.30.450.20 97 213 2.5E-30 T 17-10-2018 BJD13_06360 2781ed4279e95ce85b55b1e0e9c707be 920 Pfam PF13426 PAS domain 407 468 0.1 T 17-10-2018 IPR000014 PAS domain BJD13_06360 2781ed4279e95ce85b55b1e0e9c707be 920 SMART SM00267 470 642 5.7E-58 T 17-10-2018 IPR000160 GGDEF domain BJD13_06360 2781ed4279e95ce85b55b1e0e9c707be 920 SMART SM00086 302 345 190.0 T 17-10-2018 IPR001610 PAC motif BJD13_06360 2781ed4279e95ce85b55b1e0e9c707be 920 SMART SM00086 174 217 7.0E-7 T 17-10-2018 IPR001610 PAC motif BJD13_06360 2781ed4279e95ce85b55b1e0e9c707be 920 SMART SM00086 429 470 5.7E-4 T 17-10-2018 IPR001610 PAC motif BJD13_06360 2781ed4279e95ce85b55b1e0e9c707be 920 SUPERFAMILY SSF55785 105 218 1.12E-21 T 17-10-2018 IPR035965 PAS domain superfamily BJD13_06360 2781ed4279e95ce85b55b1e0e9c707be 920 Gene3D G3DSA:3.30.450.20 372 474 1.0E-10 T 17-10-2018 BJD13_06360 2781ed4279e95ce85b55b1e0e9c707be 920 Gene3D G3DSA:3.30.70.270 475 647 1.7E-52 T 17-10-2018 BJD13_06360 2781ed4279e95ce85b55b1e0e9c707be 920 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 478 641 5.1E-39 T 17-10-2018 IPR000160 GGDEF domain BJD13_06360 2781ed4279e95ce85b55b1e0e9c707be 920 Pfam PF00563 EAL domain 659 893 8.7E-66 T 17-10-2018 IPR001633 EAL domain BJD13_06360 2781ed4279e95ce85b55b1e0e9c707be 920 Pfam PF08447 PAS fold 122 211 1.2E-22 T 17-10-2018 IPR013655 PAS fold-3 GO:0005515 BJD13_06360 2781ed4279e95ce85b55b1e0e9c707be 920 SUPERFAMILY SSF55785 216 343 9.25E-12 T 17-10-2018 IPR035965 PAS domain superfamily BJD13_06360 2781ed4279e95ce85b55b1e0e9c707be 920 Pfam PF00990 Diguanylate cyclase, GGDEF domain 481 638 1.0E-45 T 17-10-2018 IPR000160 GGDEF domain BJD13_06360 2781ed4279e95ce85b55b1e0e9c707be 920 SUPERFAMILY SSF55073 486 644 5.57E-47 T 17-10-2018 IPR029787 Nucleotide cyclase BJD13_06360 2781ed4279e95ce85b55b1e0e9c707be 920 SMART SM00052 652 898 2.5E-106 T 17-10-2018 IPR001633 EAL domain BJD13_06360 2781ed4279e95ce85b55b1e0e9c707be 920 Gene3D G3DSA:3.30.450.20 220 343 9.9E-13 T 17-10-2018 BJD13_06360 2781ed4279e95ce85b55b1e0e9c707be 920 SUPERFAMILY SSF55785 373 478 2.74E-12 T 17-10-2018 IPR035965 PAS domain superfamily BJD13_06360 2781ed4279e95ce85b55b1e0e9c707be 920 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 371 476 1.3E-6 T 17-10-2018 IPR000014 PAS domain BJD13_06360 2781ed4279e95ce85b55b1e0e9c707be 920 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 105 224 9.1E-12 T 17-10-2018 IPR000014 PAS domain BJD13_02965 b8b9f6032eebd37d8cf88261a848b821 168 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 12 167 2.1E-62 T 17-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 BJD13_02965 b8b9f6032eebd37d8cf88261a848b821 168 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 129 145 - T 17-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 BJD13_02965 b8b9f6032eebd37d8cf88261a848b821 168 Gene3D G3DSA:3.10.50.30 86 167 1.4E-26 T 17-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 BJD13_02965 b8b9f6032eebd37d8cf88261a848b821 168 SUPERFAMILY SSF46557 13 86 1.2E-24 T 17-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 BJD13_02965 b8b9f6032eebd37d8cf88261a848b821 168 PIRSF PIRSF006092 8 167 1.9E-50 T 17-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 BJD13_02965 b8b9f6032eebd37d8cf88261a848b821 168 Hamap MF_00930 Transcription elongation factor GreB [greB]. 10 166 52.493 T 17-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 BJD13_02965 b8b9f6032eebd37d8cf88261a848b821 168 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 91 165 3.8E-25 T 17-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 BJD13_02965 b8b9f6032eebd37d8cf88261a848b821 168 SUPERFAMILY SSF54534 89 165 1.05E-21 T 17-10-2018 BJD13_02965 b8b9f6032eebd37d8cf88261a848b821 168 Hamap MF_00105 Transcription elongation factor GreA [greA]. 11 164 29.003 T 17-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 BJD13_02965 b8b9f6032eebd37d8cf88261a848b821 168 Pfam PF03449 Transcription elongation factor, N-terminal 14 83 1.4E-25 T 17-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 BJD13_02965 b8b9f6032eebd37d8cf88261a848b821 168 Gene3D G3DSA:1.10.287.180 10 85 2.4E-27 T 17-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 BJD13_02965 b8b9f6032eebd37d8cf88261a848b821 168 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 26 57 - T 17-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 BJD13_19685 991ec4fc724911951ef607dffc9d950a 250 Pfam PF13419 Haloacid dehalogenase-like hydrolase 71 193 3.1E-7 T 17-10-2018 BJD13_19685 991ec4fc724911951ef607dffc9d950a 250 SUPERFAMILY SSF56784 11 222 1.99E-25 T 17-10-2018 IPR036412 HAD-like superfamily BJD13_19685 991ec4fc724911951ef607dffc9d950a 250 Gene3D G3DSA:3.40.50.1000 13 216 2.3E-88 T 17-10-2018 IPR023214 HAD superfamily BJD13_19685 991ec4fc724911951ef607dffc9d950a 250 Gene3D G3DSA:1.10.150.240 27 109 2.3E-88 T 17-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BJD13_11900 d7c48c869128bf389f8698c65ad6869e 89 Gene3D G3DSA:3.30.860.10 1 89 4.0E-39 T 17-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_11900 d7c48c869128bf389f8698c65ad6869e 89 PIRSF PIRSF002144 1 89 5.4E-32 T 17-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_11900 d7c48c869128bf389f8698c65ad6869e 89 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 87 25.188 T 17-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_11900 d7c48c869128bf389f8698c65ad6869e 89 SUPERFAMILY SSF54570 3 82 6.15E-34 T 17-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_11900 d7c48c869128bf389f8698c65ad6869e 89 Pfam PF00203 Ribosomal protein S19 3 81 8.6E-36 T 17-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_11900 d7c48c869128bf389f8698c65ad6869e 89 PRINTS PR00975 Ribosomal protein S19 family signature 51 63 1.2E-22 T 17-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_11900 d7c48c869128bf389f8698c65ad6869e 89 PRINTS PR00975 Ribosomal protein S19 family signature 63 78 1.2E-22 T 17-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_11900 d7c48c869128bf389f8698c65ad6869e 89 PRINTS PR00975 Ribosomal protein S19 family signature 31 50 1.2E-22 T 17-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_11900 d7c48c869128bf389f8698c65ad6869e 89 ProSitePatterns PS00323 Ribosomal protein S19 signature. 51 75 - T 17-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_11900 d7c48c869128bf389f8698c65ad6869e 89 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 87 2.0E-42 T 17-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 BJD13_15790 2d7787645308f264677839f21ecc33f1 210 Gene3D G3DSA:1.10.10.60 10 67 3.0E-26 T 17-10-2018 BJD13_15790 2d7787645308f264677839f21ecc33f1 210 SUPERFAMILY SSF48498 94 207 1.16E-12 T 17-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BJD13_15790 2d7787645308f264677839f21ecc33f1 210 SUPERFAMILY SSF46689 10 89 3.94E-21 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_15790 2d7787645308f264677839f21ecc33f1 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 5.4E-9 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD13_15790 2d7787645308f264677839f21ecc33f1 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 5.4E-9 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD13_15790 2d7787645308f264677839f21ecc33f1 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 68 7.1E-19 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD13_15790 2d7787645308f264677839f21ecc33f1 210 ProSitePatterns PS01081 TetR-type HTH domain signature. 34 64 - T 17-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BJD13_15790 2d7787645308f264677839f21ecc33f1 210 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 153 207 1.9E-19 T 17-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type BJD13_15790 2d7787645308f264677839f21ecc33f1 210 Gene3D G3DSA:1.10.357.10 69 209 3.4E-35 T 17-10-2018 BJD13_00745 f28301b1cab5539a49624b04b55e71fb 375 Pfam PF07042 TrfA protein 111 365 6.7E-28 T 17-10-2018 IPR010751 Plasmid replication initiator protein TrfA BJD13_18750 698de127748dd3e507e81ea8f4e3ad0a 331 Pfam PF00005 ABC transporter 27 171 1.9E-27 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD13_18750 698de127748dd3e507e81ea8f4e3ad0a 331 Gene3D G3DSA:3.40.50.300 3 237 4.4E-61 T 17-10-2018 BJD13_18750 698de127748dd3e507e81ea8f4e3ad0a 331 SUPERFAMILY SSF52540 7 238 5.74E-62 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_18750 698de127748dd3e507e81ea8f4e3ad0a 331 SMART SM00382 36 218 5.4E-11 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_18750 698de127748dd3e507e81ea8f4e3ad0a 331 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD13_19080 0c07d3fc9891ef242dda060873f3240f 439 Pfam PF12704 MacB-like periplasmic core domain 73 277 2.0E-14 T 17-10-2018 IPR025857 MacB-like periplasmic core domain BJD13_19080 0c07d3fc9891ef242dda060873f3240f 439 Pfam PF02687 FtsX-like permease family 337 430 3.0E-7 T 17-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 BJD13_00285 bef686883a2eb284db95b37c2ac87b8a 1046 Gene3D G3DSA:3.30.2090.10 181 271 2.9E-250 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_00285 bef686883a2eb284db95b37c2ac87b8a 1046 SUPERFAMILY SSF82866 294 503 1.26E-39 T 17-10-2018 BJD13_00285 bef686883a2eb284db95b37c2ac87b8a 1046 Gene3D G3DSA:1.20.1640.10 12 513 2.9E-250 T 17-10-2018 BJD13_00285 bef686883a2eb284db95b37c2ac87b8a 1046 Pfam PF00873 AcrB/AcrD/AcrF family 7 1034 5.1E-224 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_00285 bef686883a2eb284db95b37c2ac87b8a 1046 SUPERFAMILY SSF82693 137 327 2.3E-18 T 17-10-2018 BJD13_00285 bef686883a2eb284db95b37c2ac87b8a 1046 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1038 0.0 T 17-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 BJD13_00285 bef686883a2eb284db95b37c2ac87b8a 1046 Gene3D G3DSA:3.30.2090.10 719 807 2.9E-250 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_00285 bef686883a2eb284db95b37c2ac87b8a 1046 SUPERFAMILY SSF82866 805 1037 4.05E-44 T 17-10-2018 BJD13_00285 bef686883a2eb284db95b37c2ac87b8a 1046 Gene3D G3DSA:3.30.70.1320 135 329 2.9E-250 T 17-10-2018 BJD13_00285 bef686883a2eb284db95b37c2ac87b8a 1046 SUPERFAMILY SSF82714 185 267 3.14E-15 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_00285 bef686883a2eb284db95b37c2ac87b8a 1046 SUPERFAMILY SSF82714 721 806 7.59E-14 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_00285 bef686883a2eb284db95b37c2ac87b8a 1046 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 2.2E-24 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_00285 bef686883a2eb284db95b37c2ac87b8a 1046 PRINTS PR00702 Acriflavin resistance protein family signature 333 356 2.2E-24 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_00285 bef686883a2eb284db95b37c2ac87b8a 1046 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 2.2E-24 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_00285 bef686883a2eb284db95b37c2ac87b8a 1046 PRINTS PR00702 Acriflavin resistance protein family signature 388 412 2.2E-24 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_00285 bef686883a2eb284db95b37c2ac87b8a 1046 PRINTS PR00702 Acriflavin resistance protein family signature 550 567 2.2E-24 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_00285 bef686883a2eb284db95b37c2ac87b8a 1046 PRINTS PR00702 Acriflavin resistance protein family signature 360 381 2.2E-24 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_00285 bef686883a2eb284db95b37c2ac87b8a 1046 SUPERFAMILY SSF82693 45 127 8.63E-19 T 17-10-2018 BJD13_00285 bef686883a2eb284db95b37c2ac87b8a 1046 Gene3D G3DSA:1.20.1640.10 514 1031 2.9E-250 T 17-10-2018 BJD13_00285 bef686883a2eb284db95b37c2ac87b8a 1046 Gene3D G3DSA:3.30.70.1440 665 865 2.9E-250 T 17-10-2018 BJD13_00285 bef686883a2eb284db95b37c2ac87b8a 1046 Gene3D G3DSA:3.30.70.1430 565 664 2.9E-250 T 17-10-2018 BJD13_00285 bef686883a2eb284db95b37c2ac87b8a 1046 Gene3D G3DSA:3.30.70.1430 42 815 2.9E-250 T 17-10-2018 BJD13_19570 8898daa1e33ab0d7543f5a3410f377c8 582 Gene3D G3DSA:3.40.1360.10 243 369 1.4E-41 T 17-10-2018 BJD13_19570 8898daa1e33ab0d7543f5a3410f377c8 582 TIGRFAM TIGR01391 dnaG: DNA primase 3 419 5.6E-138 T 17-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 BJD13_19570 8898daa1e33ab0d7543f5a3410f377c8 582 SMART SM00400 35 89 6.2E-32 T 17-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 BJD13_19570 8898daa1e33ab0d7543f5a3410f377c8 582 Gene3D G3DSA:1.10.860.10 438 581 6.7E-38 T 17-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal BJD13_19570 8898daa1e33ab0d7543f5a3410f377c8 582 Gene3D G3DSA:1.20.50.20 370 426 1.0E-13 T 17-10-2018 BJD13_19570 8898daa1e33ab0d7543f5a3410f377c8 582 PIRSF PIRSF002811 1 581 8.9E-136 T 17-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 BJD13_19570 8898daa1e33ab0d7543f5a3410f377c8 582 Pfam PF08275 DNA primase catalytic core, N-terminal domain 124 253 2.5E-38 T 17-10-2018 IPR013264 DNA primase, catalytic core, N-terminal BJD13_19570 8898daa1e33ab0d7543f5a3410f377c8 582 SUPERFAMILY SSF117023 448 579 2.62E-34 T 17-10-2018 BJD13_19570 8898daa1e33ab0d7543f5a3410f377c8 582 Pfam PF13155 Toprim-like 264 349 1.1E-13 T 17-10-2018 BJD13_19570 8898daa1e33ab0d7543f5a3410f377c8 582 SMART SM00766 451 576 5.6E-35 T 17-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 BJD13_19570 8898daa1e33ab0d7543f5a3410f377c8 582 Pfam PF10410 DnaB-helicase binding domain of primase 371 424 8.1E-12 T 17-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 BJD13_19570 8898daa1e33ab0d7543f5a3410f377c8 582 SMART SM00493 261 332 1.1E-20 T 17-10-2018 IPR006171 TOPRIM domain BJD13_19570 8898daa1e33ab0d7543f5a3410f377c8 582 Hamap MF_00974 DNA primase [dnaG]. 3 577 28.801 T 17-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 BJD13_19570 8898daa1e33ab0d7543f5a3410f377c8 582 SUPERFAMILY SSF57783 1 99 1.36E-35 T 17-10-2018 BJD13_19570 8898daa1e33ab0d7543f5a3410f377c8 582 Pfam PF01807 CHC2 zinc finger 5 100 9.6E-38 T 17-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 BJD13_19570 8898daa1e33ab0d7543f5a3410f377c8 582 Pfam PF08278 DNA primase DnaG DnaB-binding 452 575 4.0E-26 T 17-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 BJD13_19570 8898daa1e33ab0d7543f5a3410f377c8 582 Gene3D G3DSA:3.90.980.10 113 242 2.0E-38 T 17-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily BJD13_19570 8898daa1e33ab0d7543f5a3410f377c8 582 SUPERFAMILY SSF56731 114 423 1.15E-104 T 17-10-2018 BJD13_19570 8898daa1e33ab0d7543f5a3410f377c8 582 Gene3D G3DSA:3.90.580.10 1 101 2.0E-37 T 17-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 BJD13_13395 8c429c8d4789fed9adb329cf371076d4 464 Pfam PF00295 Glycosyl hydrolases family 28 156 420 1.5E-42 T 17-10-2018 IPR000743 Glycoside hydrolase, family 28 GO:0004650|GO:0005975 BJD13_13395 8c429c8d4789fed9adb329cf371076d4 464 Gene3D G3DSA:2.160.20.10 28 422 1.6E-83 T 17-10-2018 IPR012334 Pectin lyase fold BJD13_13395 8c429c8d4789fed9adb329cf371076d4 464 SUPERFAMILY SSF51126 64 413 1.24E-55 T 17-10-2018 IPR011050 Pectin lyase fold/virulence factor BJD13_13395 8c429c8d4789fed9adb329cf371076d4 464 SMART SM00710 252 273 77.0 T 17-10-2018 IPR006626 Parallel beta-helix repeat BJD13_13395 8c429c8d4789fed9adb329cf371076d4 464 SMART SM00710 278 298 500.0 T 17-10-2018 IPR006626 Parallel beta-helix repeat BJD13_13395 8c429c8d4789fed9adb329cf371076d4 464 SMART SM00710 225 251 3600.0 T 17-10-2018 IPR006626 Parallel beta-helix repeat BJD13_13395 8c429c8d4789fed9adb329cf371076d4 464 SMART SM00710 304 334 410.0 T 17-10-2018 IPR006626 Parallel beta-helix repeat BJD13_21800 c03ce413c2e686ee2307f80a9e240821 1120 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 233 964 1.2E-138 T 17-10-2018 IPR005887 Alpha-1,2-mannosidase, putative BJD13_21800 c03ce413c2e686ee2307f80a9e240821 1120 Gene3D G3DSA:1.20.1610.10 654 835 1.6E-250 T 17-10-2018 BJD13_21800 c03ce413c2e686ee2307f80a9e240821 1120 Gene3D G3DSA:3.30.2080.10 488 965 1.6E-250 T 17-10-2018 BJD13_21800 c03ce413c2e686ee2307f80a9e240821 1120 SUPERFAMILY SSF48208 456 948 1.53E-17 T 17-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 BJD13_21800 c03ce413c2e686ee2307f80a9e240821 1120 Gene3D G3DSA:1.20.1050.60 560 653 1.6E-250 T 17-10-2018 BJD13_21800 c03ce413c2e686ee2307f80a9e240821 1120 Pfam PF07971 Glycosyl hydrolase family 92 428 962 5.8E-149 T 17-10-2018 IPR012939 Glycosyl hydrolase family 92 BJD13_21800 c03ce413c2e686ee2307f80a9e240821 1120 Gene3D G3DSA:2.70.98.10 225 559 1.6E-250 T 17-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 BJD13_14340 5a43c1d38d7dea7beb4d451e545aeb19 300 Gene3D G3DSA:3.40.190.290 92 293 1.6E-40 T 17-10-2018 BJD13_14340 5a43c1d38d7dea7beb4d451e545aeb19 300 SUPERFAMILY SSF46785 3 85 2.11E-20 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_14340 5a43c1d38d7dea7beb4d451e545aeb19 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 3.3E-20 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_14340 5a43c1d38d7dea7beb4d451e545aeb19 300 Gene3D G3DSA:1.10.10.10 1 91 2.1E-25 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_14340 5a43c1d38d7dea7beb4d451e545aeb19 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 7.0E-7 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_14340 5a43c1d38d7dea7beb4d451e545aeb19 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 7.0E-7 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_14340 5a43c1d38d7dea7beb4d451e545aeb19 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 7.0E-7 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_14340 5a43c1d38d7dea7beb4d451e545aeb19 300 Pfam PF03466 LysR substrate binding domain 89 288 3.4E-39 T 17-10-2018 IPR005119 LysR, substrate-binding BJD13_14340 5a43c1d38d7dea7beb4d451e545aeb19 300 SUPERFAMILY SSF53850 90 292 2.17E-35 T 17-10-2018 BJD13_04185 2d34e4fb7118db19c8a9ecaba49fc512 333 SUPERFAMILY SSF143865 9 265 4.58E-73 T 17-10-2018 BJD13_04185 2d34e4fb7118db19c8a9ecaba49fc512 333 Pfam PF01544 CorA-like Mg2+ transporter protein 42 329 2.6E-61 T 17-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 BJD13_04185 2d34e4fb7118db19c8a9ecaba49fc512 333 Gene3D G3DSA:1.20.58.340 257 333 3.5E-19 T 17-10-2018 BJD13_04185 2d34e4fb7118db19c8a9ecaba49fc512 333 Gene3D G3DSA:1.20.58.340 142 254 1.6E-32 T 17-10-2018 BJD13_04185 2d34e4fb7118db19c8a9ecaba49fc512 333 Gene3D G3DSA:3.30.460.20 2 141 2.4E-29 T 17-10-2018 BJD13_04185 2d34e4fb7118db19c8a9ecaba49fc512 333 SUPERFAMILY SSF144083 269 330 5.49E-16 T 17-10-2018 BJD13_00530 38f3fdb45aabc66751b5dbac36fa7f87 137 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 5.6E-11 T 17-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD13_00530 38f3fdb45aabc66751b5dbac36fa7f87 137 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 5.6E-11 T 17-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD13_00530 38f3fdb45aabc66751b5dbac36fa7f87 137 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 5.6E-11 T 17-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD13_00530 38f3fdb45aabc66751b5dbac36fa7f87 137 SUPERFAMILY SSF46955 1 126 1.61E-38 T 17-10-2018 IPR009061 Putative DNA-binding domain superfamily BJD13_00530 38f3fdb45aabc66751b5dbac36fa7f87 137 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 17-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD13_00530 38f3fdb45aabc66751b5dbac36fa7f87 137 Pfam PF00376 MerR family regulatory protein 2 39 2.4E-15 T 17-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD13_00530 38f3fdb45aabc66751b5dbac36fa7f87 137 Pfam PF09278 MerR, DNA binding 44 107 2.5E-20 T 17-10-2018 IPR015358 Transcription regulator MerR, DNA binding BJD13_00530 38f3fdb45aabc66751b5dbac36fa7f87 137 Gene3D G3DSA:1.10.1660.10 1 125 2.7E-37 T 17-10-2018 BJD13_00530 38f3fdb45aabc66751b5dbac36fa7f87 137 SMART SM00422 1 70 3.2E-30 T 17-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD13_07030 87051270b5aa85903470fd67ef026185 1080 SUPERFAMILY SSF56059 128 401 1.13E-107 T 17-10-2018 BJD13_07030 87051270b5aa85903470fd67ef026185 1080 Gene3D G3DSA:3.30.470.20 119 403 5.6E-126 T 17-10-2018 BJD13_07030 87051270b5aa85903470fd67ef026185 1080 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 4.9E-70 T 17-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BJD13_07030 87051270b5aa85903470fd67ef026185 1080 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 674 882 3.3E-38 T 17-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BJD13_07030 87051270b5aa85903470fd67ef026185 1080 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1059 0.0 T 17-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BJD13_07030 87051270b5aa85903470fd67ef026185 1080 Gene3D G3DSA:3.40.50.20 1 116 2.1E-49 T 17-10-2018 BJD13_07030 87051270b5aa85903470fd67ef026185 1080 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1068 13.293 T 17-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BJD13_07030 87051270b5aa85903470fd67ef026185 1080 SUPERFAMILY SSF52440 557 676 2.88E-49 T 17-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BJD13_07030 87051270b5aa85903470fd67ef026185 1080 Gene3D G3DSA:3.40.50.20 556 663 9.5E-49 T 17-10-2018 BJD13_07030 87051270b5aa85903470fd67ef026185 1080 SUPERFAMILY SSF56059 674 939 9.72E-103 T 17-10-2018 BJD13_07030 87051270b5aa85903470fd67ef026185 1080 SMART SM00851 962 1048 1.0E-32 T 17-10-2018 IPR011607 Methylglyoxal synthase-like domain BJD13_07030 87051270b5aa85903470fd67ef026185 1080 SUPERFAMILY SSF52440 1 127 1.73E-49 T 17-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BJD13_07030 87051270b5aa85903470fd67ef026185 1080 SMART SM01096 425 548 1.6E-70 T 17-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BJD13_07030 87051270b5aa85903470fd67ef026185 1080 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 428 548 4.9E-39 T 17-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BJD13_07030 87051270b5aa85903470fd67ef026185 1080 SUPERFAMILY SSF48108 396 555 9.02E-51 T 17-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BJD13_07030 87051270b5aa85903470fd67ef026185 1080 SUPERFAMILY SSF52335 942 1077 6.28E-40 T 17-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily BJD13_07030 87051270b5aa85903470fd67ef026185 1080 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 845 852 - T 17-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BJD13_07030 87051270b5aa85903470fd67ef026185 1080 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 17-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BJD13_07030 87051270b5aa85903470fd67ef026185 1080 Gene3D G3DSA:3.40.50.1380 945 1079 5.0E-38 T 17-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily BJD13_07030 87051270b5aa85903470fd67ef026185 1080 Pfam PF02142 MGS-like domain 963 1048 1.9E-19 T 17-10-2018 IPR011607 Methylglyoxal synthase-like domain BJD13_07030 87051270b5aa85903470fd67ef026185 1080 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1074 13.497 T 17-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BJD13_07030 87051270b5aa85903470fd67ef026185 1080 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 710 724 - T 17-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BJD13_07030 87051270b5aa85903470fd67ef026185 1080 Gene3D G3DSA:1.10.1030.10 404 554 1.5E-47 T 17-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BJD13_07030 87051270b5aa85903470fd67ef026185 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 6.2E-66 T 17-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BJD13_07030 87051270b5aa85903470fd67ef026185 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 6.2E-66 T 17-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BJD13_07030 87051270b5aa85903470fd67ef026185 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 6.2E-66 T 17-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BJD13_07030 87051270b5aa85903470fd67ef026185 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 6.2E-66 T 17-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BJD13_07030 87051270b5aa85903470fd67ef026185 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 6.2E-66 T 17-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BJD13_07030 87051270b5aa85903470fd67ef026185 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 6.2E-66 T 17-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BJD13_07030 87051270b5aa85903470fd67ef026185 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 6.2E-66 T 17-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BJD13_07030 87051270b5aa85903470fd67ef026185 1080 Gene3D G3DSA:3.30.470.20 666 941 1.6E-114 T 17-10-2018 BJD13_05250 4b3962632aaa24ac951413dde2fe21eb 130 Gene3D G3DSA:1.10.760.10 49 130 9.7E-20 T 17-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BJD13_05250 4b3962632aaa24ac951413dde2fe21eb 130 SUPERFAMILY SSF46626 31 130 4.51E-19 T 17-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BJD13_05250 4b3962632aaa24ac951413dde2fe21eb 130 Pfam PF00034 Cytochrome c 58 130 1.5E-7 T 17-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_22040 70b1db6b4b25e856eeba1f5d0ebeaf09 400 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 5 32 0.0012 T 17-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal BJD13_22040 70b1db6b4b25e856eeba1f5d0ebeaf09 400 SUPERFAMILY SSF53383 50 370 1.57E-62 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD13_22040 70b1db6b4b25e856eeba1f5d0ebeaf09 400 Gene3D G3DSA:3.90.1150.10 48 361 3.9E-85 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD13_22040 70b1db6b4b25e856eeba1f5d0ebeaf09 400 Gene3D G3DSA:3.40.640.10 63 279 3.9E-85 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD13_22040 70b1db6b4b25e856eeba1f5d0ebeaf09 400 Pfam PF00155 Aminotransferase class I and II 53 365 6.7E-40 T 17-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BJD13_15920 89cb8e3d8e683dc8781946cbe29a7d05 448 Gene3D G3DSA:1.10.10.60 390 448 4.7E-16 T 17-10-2018 BJD13_15920 89cb8e3d8e683dc8781946cbe29a7d05 448 SUPERFAMILY SSF46689 352 448 1.08E-17 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_15920 89cb8e3d8e683dc8781946cbe29a7d05 448 SMART SM00448 2 115 1.5E-30 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_15920 89cb8e3d8e683dc8781946cbe29a7d05 448 Gene3D G3DSA:1.10.8.60 314 387 1.7E-20 T 17-10-2018 BJD13_15920 89cb8e3d8e683dc8781946cbe29a7d05 448 Pfam PF00072 Response regulator receiver domain 4 115 1.3E-23 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_15920 89cb8e3d8e683dc8781946cbe29a7d05 448 Gene3D G3DSA:3.40.50.300 134 313 3.6E-66 T 17-10-2018 BJD13_15920 89cb8e3d8e683dc8781946cbe29a7d05 448 SMART SM00382 163 306 7.1E-11 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_15920 89cb8e3d8e683dc8781946cbe29a7d05 448 Pfam PF02954 Bacterial regulatory protein, Fis family 407 446 2.0E-13 T 17-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD13_15920 89cb8e3d8e683dc8781946cbe29a7d05 448 Pfam PF00158 Sigma-54 interaction domain 143 310 1.4E-68 T 17-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 BJD13_15920 89cb8e3d8e683dc8781946cbe29a7d05 448 SUPERFAMILY SSF52172 1 187 1.99E-38 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_15920 89cb8e3d8e683dc8781946cbe29a7d05 448 SUPERFAMILY SSF52540 143 383 1.13E-71 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_15920 89cb8e3d8e683dc8781946cbe29a7d05 448 Gene3D G3DSA:3.40.50.2300 1 133 1.4E-31 T 17-10-2018 BJD13_15920 89cb8e3d8e683dc8781946cbe29a7d05 448 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 429 448 7.6E-13 T 17-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD13_15920 89cb8e3d8e683dc8781946cbe29a7d05 448 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 412 429 7.6E-13 T 17-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD13_15920 89cb8e3d8e683dc8781946cbe29a7d05 448 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 352 361 - T 17-10-2018 IPR025944 Sigma-54 interaction domain, conserved site BJD13_15920 89cb8e3d8e683dc8781946cbe29a7d05 448 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 229 244 - T 17-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BJD13_22010 c8d9464feca9ad6d47bc900251066db8 408 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 15 401 1.5E-140 T 17-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 BJD13_22010 c8d9464feca9ad6d47bc900251066db8 408 PIRSF PIRSF000521 174 404 4.3E-34 T 17-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BJD13_22010 c8d9464feca9ad6d47bc900251066db8 408 PIRSF PIRSF000521 20 159 1.9E-9 T 17-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BJD13_22010 c8d9464feca9ad6d47bc900251066db8 408 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 224 261 - T 17-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BJD13_22010 c8d9464feca9ad6d47bc900251066db8 408 Gene3D G3DSA:3.90.1150.10 23 394 9.7E-144 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD13_22010 c8d9464feca9ad6d47bc900251066db8 408 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 14 404 71.124 T 17-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 BJD13_22010 c8d9464feca9ad6d47bc900251066db8 408 SUPERFAMILY SSF53383 13 401 4.26E-122 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD13_22010 c8d9464feca9ad6d47bc900251066db8 408 Gene3D G3DSA:3.40.640.10 58 306 9.7E-144 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD13_22010 c8d9464feca9ad6d47bc900251066db8 408 Pfam PF00202 Aminotransferase class-III 23 400 2.8E-115 T 17-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BJD13_23095 296ff53bba2d98e8894c58a1f085b783 588 Pfam PF00152 tRNA synthetases class II (D, K and N) 121 558 6.9E-106 T 17-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD13_23095 296ff53bba2d98e8894c58a1f085b783 588 SUPERFAMILY SSF55681 115 585 5.38E-105 T 17-10-2018 BJD13_23095 296ff53bba2d98e8894c58a1f085b783 588 Gene3D G3DSA:3.30.1360.30 275 420 1.7E-189 T 17-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 BJD13_23095 296ff53bba2d98e8894c58a1f085b783 588 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 583 2.3E-226 T 17-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 BJD13_23095 296ff53bba2d98e8894c58a1f085b783 588 Pfam PF01336 OB-fold nucleic acid binding domain 18 105 8.7E-13 T 17-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 BJD13_23095 296ff53bba2d98e8894c58a1f085b783 588 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 584 32.809 T 17-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 BJD13_23095 296ff53bba2d98e8894c58a1f085b783 588 PRINTS PR01042 Aspartyl-tRNA synthetase signature 193 205 6.3E-26 T 17-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD13_23095 296ff53bba2d98e8894c58a1f085b783 588 PRINTS PR01042 Aspartyl-tRNA synthetase signature 210 223 6.3E-26 T 17-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD13_23095 296ff53bba2d98e8894c58a1f085b783 588 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 6.3E-26 T 17-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD13_23095 296ff53bba2d98e8894c58a1f085b783 588 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 6.3E-26 T 17-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD13_23095 296ff53bba2d98e8894c58a1f085b783 588 SUPERFAMILY SSF55261 294 420 1.31E-40 T 17-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 BJD13_23095 296ff53bba2d98e8894c58a1f085b783 588 Pfam PF02938 GAD domain 311 405 6.5E-26 T 17-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 BJD13_23095 296ff53bba2d98e8894c58a1f085b783 588 Gene3D G3DSA:3.30.930.10 120 582 1.7E-189 T 17-10-2018 BJD13_23095 296ff53bba2d98e8894c58a1f085b783 588 Gene3D G3DSA:2.40.50.140 1 114 3.3E-28 T 17-10-2018 BJD13_23095 296ff53bba2d98e8894c58a1f085b783 588 SUPERFAMILY SSF50249 1 112 1.05E-26 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD13_08000 becb327292ab2ca8cbb0bd7f53c9a49c 121 Pfam PF04977 Septum formation initiator 14 92 3.7E-30 T 17-10-2018 IPR007060 Septum formation initiator FtsL/DivIC BJD13_08000 becb327292ab2ca8cbb0bd7f53c9a49c 121 Hamap MF_00599 Cell division protein FtsB [ftsB]. 2 93 35.159 T 17-10-2018 IPR023081 Cell division protein FtsB BJD13_20760 c1cc72704fcf1004f11254dc4d5124f7 237 SUPERFAMILY SSF55120 61 226 3.52E-36 T 17-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD13_20760 c1cc72704fcf1004f11254dc4d5124f7 237 Gene3D G3DSA:3.10.290.10 1 54 8.7E-7 T 17-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 BJD13_20760 c1cc72704fcf1004f11254dc4d5124f7 237 Gene3D G3DSA:3.30.70.580 61 226 2.9E-48 T 17-10-2018 BJD13_20760 c1cc72704fcf1004f11254dc4d5124f7 237 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 64 223 3.1E-41 T 17-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 BJD13_20760 c1cc72704fcf1004f11254dc4d5124f7 237 Pfam PF00849 RNA pseudouridylate synthase 61 137 3.7E-10 T 17-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD13_20760 c1cc72704fcf1004f11254dc4d5124f7 237 Gene3D G3DSA:3.30.70.1560 128 210 2.9E-48 T 17-10-2018 BJD13_04655 d4425a6aace0b81be65fc0c0360092cd 366 Pfam PF01546 Peptidase family M20/M25/M40 68 362 3.5E-18 T 17-10-2018 IPR002933 Peptidase M20 GO:0016787 BJD13_04655 d4425a6aace0b81be65fc0c0360092cd 366 Pfam PF07687 Peptidase dimerisation domain 164 271 6.5E-14 T 17-10-2018 IPR011650 Peptidase M20, dimerisation domain BJD13_04655 d4425a6aace0b81be65fc0c0360092cd 366 Gene3D G3DSA:3.30.70.360 167 280 7.6E-117 T 17-10-2018 BJD13_04655 d4425a6aace0b81be65fc0c0360092cd 366 SUPERFAMILY SSF55031 166 272 1.48E-10 T 17-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain BJD13_04655 d4425a6aace0b81be65fc0c0360092cd 366 Gene3D G3DSA:3.40.630.10 15 352 7.6E-117 T 17-10-2018 BJD13_04655 d4425a6aace0b81be65fc0c0360092cd 366 SUPERFAMILY SSF53187 5 362 8.8E-34 T 17-10-2018 BJD13_23275 b0b7b85bfc988ea1b5331136bfe00288 1373 SMART SM00490 316 416 6.7E-14 T 17-10-2018 IPR001650 Helicase, C-terminal BJD13_23275 b0b7b85bfc988ea1b5331136bfe00288 1373 SUPERFAMILY SSF52540 77 613 1.83E-100 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_23275 b0b7b85bfc988ea1b5331136bfe00288 1373 Pfam PF11898 Domain of unknown function (DUF3418) 793 1369 3.9E-175 T 17-10-2018 IPR024590 RNA helicase HrpA, C-terminal BJD13_23275 b0b7b85bfc988ea1b5331136bfe00288 1373 Pfam PF00270 DEAD/DEAH box helicase 84 233 3.6E-7 T 17-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BJD13_23275 b0b7b85bfc988ea1b5331136bfe00288 1373 SMART SM00382 92 382 1.4E-5 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_23275 b0b7b85bfc988ea1b5331136bfe00288 1373 Gene3D G3DSA:1.20.120.1080 461 562 6.4E-20 T 17-10-2018 BJD13_23275 b0b7b85bfc988ea1b5331136bfe00288 1373 Pfam PF04408 Helicase associated domain (HA2) 479 556 1.5E-17 T 17-10-2018 IPR007502 Helicase-associated domain GO:0004386 BJD13_23275 b0b7b85bfc988ea1b5331136bfe00288 1373 Pfam PF00271 Helicase conserved C-terminal domain 295 415 2.9E-10 T 17-10-2018 IPR001650 Helicase, C-terminal BJD13_23275 b0b7b85bfc988ea1b5331136bfe00288 1373 SMART SM00847 476 566 3.0E-33 T 17-10-2018 IPR007502 Helicase-associated domain GO:0004386 BJD13_23275 b0b7b85bfc988ea1b5331136bfe00288 1373 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 703 777 4.0E-13 T 17-10-2018 IPR011709 Domain of unknown function DUF1605 BJD13_23275 b0b7b85bfc988ea1b5331136bfe00288 1373 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 46 620 2.7E-268 T 17-10-2018 IPR010222 RNA helicase HrpA GO:0004004 BJD13_23275 b0b7b85bfc988ea1b5331136bfe00288 1373 Gene3D G3DSA:3.40.50.300 38 252 9.8E-81 T 17-10-2018 BJD13_23275 b0b7b85bfc988ea1b5331136bfe00288 1373 Gene3D G3DSA:3.40.50.300 253 432 3.2E-55 T 17-10-2018 BJD13_23275 b0b7b85bfc988ea1b5331136bfe00288 1373 SMART SM00487 68 259 9.7E-28 T 17-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BJD13_21000 9a906185b37fce359174baf4d1eeb104 174 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 24 167 1.4E-22 T 17-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BJD13_21000 9a906185b37fce359174baf4d1eeb104 174 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 17 171 2.0E-43 T 17-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 BJD13_21000 9a906185b37fce359174baf4d1eeb104 174 Gene3D G3DSA:3.10.180.10 3 171 4.7E-59 T 17-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD13_21000 9a906185b37fce359174baf4d1eeb104 174 ProSitePatterns PS00934 Glyoxalase I signature 1. 26 47 - T 17-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 BJD13_21000 9a906185b37fce359174baf4d1eeb104 174 SUPERFAMILY SSF54593 20 172 1.34E-32 T 17-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD13_21000 9a906185b37fce359174baf4d1eeb104 174 ProSitePatterns PS00935 Glyoxalase I signature 2. 111 127 - T 17-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 BJD13_23165 a39ddc7ffc6d713839a3bd736b00ffc4 149 TIGRFAM TIGR02801 tolR: protein TolR 14 138 4.0E-40 T 17-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 BJD13_23165 a39ddc7ffc6d713839a3bd736b00ffc4 149 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 138 1.4E-27 T 17-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 BJD13_23165 a39ddc7ffc6d713839a3bd736b00ffc4 149 Hamap MF_02203 Tol-Pal system protein TolR [tolR]. 6 139 28.034 T 17-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 BJD13_23165 a39ddc7ffc6d713839a3bd736b00ffc4 149 Gene3D G3DSA:3.30.420.270 59 132 5.0E-14 T 17-10-2018 BJD13_10205 7a482ec87c0d7c560aafa7816f2f7142 349 SUPERFAMILY SSF74650 3 331 4.52E-95 T 17-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 BJD13_10205 7a482ec87c0d7c560aafa7816f2f7142 349 Pfam PF01263 Aldose 1-epimerase 16 330 1.9E-76 T 17-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 BJD13_10205 7a482ec87c0d7c560aafa7816f2f7142 349 Gene3D G3DSA:2.70.98.10 7 336 1.5E-105 T 17-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 BJD13_10205 7a482ec87c0d7c560aafa7816f2f7142 349 PIRSF PIRSF005096 1 334 7.1E-99 T 17-10-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 BJD13_10710 34e84c534a71a00b25ef9e9de72851a6 1082 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 316 736 8.0E-142 T 17-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD13_10710 34e84c534a71a00b25ef9e9de72851a6 1082 SUPERFAMILY SSF89550 48 235 6.47E-8 T 17-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 BJD13_10710 34e84c534a71a00b25ef9e9de72851a6 1082 Pfam PF14579 Helix-hairpin-helix motif 818 914 9.5E-20 T 17-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD13_10710 34e84c534a71a00b25ef9e9de72851a6 1082 SMART SM00481 49 116 5.3E-9 T 17-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal BJD13_10710 34e84c534a71a00b25ef9e9de72851a6 1082 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 48 1082 12.95 T 17-10-2018 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD13_10710 34e84c534a71a00b25ef9e9de72851a6 1082 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 49 914 3.2E-150 T 17-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD13_10710 34e84c534a71a00b25ef9e9de72851a6 1082 Pfam PF02811 PHP domain 50 142 7.2E-13 T 17-10-2018 IPR004013 PHP domain GO:0003824 BJD13_10710 34e84c534a71a00b25ef9e9de72851a6 1082 Gene3D G3DSA:3.20.20.140 24 294 9.7E-51 T 17-10-2018 BJD13_07885 5e960702a2a0415f311138fef4575e50 882 SUPERFAMILY SSF55681 7 257 3.73E-106 T 17-10-2018 BJD13_07885 5e960702a2a0415f311138fef4575e50 882 SUPERFAMILY SSF50447 458 554 2.35E-16 T 17-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BJD13_07885 5e960702a2a0415f311138fef4575e50 882 Pfam PF02272 DHHA1 domain 738 871 9.9E-25 T 17-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 BJD13_07885 5e960702a2a0415f311138fef4575e50 882 Gene3D G3DSA:2.40.30.130 467 556 2.3E-8 T 17-10-2018 BJD13_07885 5e960702a2a0415f311138fef4575e50 882 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 659 702 1.7E-17 T 17-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 BJD13_07885 5e960702a2a0415f311138fef4575e50 882 Gene3D G3DSA:3.30.930.10 6 254 7.4E-118 T 17-10-2018 BJD13_07885 5e960702a2a0415f311138fef4575e50 882 SUPERFAMILY SSF101353 258 447 4.18E-59 T 17-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 BJD13_07885 5e960702a2a0415f311138fef4575e50 882 Gene3D G3DSA:3.30.54.20 630 683 4.2E-50 T 17-10-2018 BJD13_07885 5e960702a2a0415f311138fef4575e50 882 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 12 860 0.0 T 17-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 BJD13_07885 5e960702a2a0415f311138fef4575e50 882 Pfam PF01411 tRNA synthetases class II (A) 11 562 4.1E-214 T 17-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 BJD13_07885 5e960702a2a0415f311138fef4575e50 882 Gene3D G3DSA:3.10.310.40 771 877 3.9E-26 T 17-10-2018 BJD13_07885 5e960702a2a0415f311138fef4575e50 882 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 881 195.461 T 17-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 BJD13_07885 5e960702a2a0415f311138fef4575e50 882 SUPERFAMILY SSF55186 558 715 2.49E-53 T 17-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 BJD13_07885 5e960702a2a0415f311138fef4575e50 882 PRINTS PR00980 Alanyl-tRNA synthetase signature 211 222 4.0E-32 T 17-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 BJD13_07885 5e960702a2a0415f311138fef4575e50 882 PRINTS PR00980 Alanyl-tRNA synthetase signature 238 251 4.0E-32 T 17-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 BJD13_07885 5e960702a2a0415f311138fef4575e50 882 PRINTS PR00980 Alanyl-tRNA synthetase signature 284 300 4.0E-32 T 17-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 BJD13_07885 5e960702a2a0415f311138fef4575e50 882 PRINTS PR00980 Alanyl-tRNA synthetase signature 308 321 4.0E-32 T 17-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 BJD13_07885 5e960702a2a0415f311138fef4575e50 882 PRINTS PR00980 Alanyl-tRNA synthetase signature 80 91 4.0E-32 T 17-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 BJD13_07885 5e960702a2a0415f311138fef4575e50 882 SMART SM00863 659 702 5.2E-22 T 17-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 BJD13_07885 5e960702a2a0415f311138fef4575e50 882 Gene3D G3DSA:3.30.980.10 569 703 4.2E-50 T 17-10-2018 BJD13_12310 15a4486a3463eb420dce76310d52b11c 579 SUPERFAMILY SSF50715 364 575 1.36E-69 T 17-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BJD13_12310 15a4486a3463eb420dce76310d52b11c 579 Gene3D G3DSA:1.10.1160.10 285 363 6.0E-33 T 17-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 BJD13_12310 15a4486a3463eb420dce76310d52b11c 579 PRINTS PR00987 Glutamyl-tRNA synthetase signature 67 80 8.0E-8 T 17-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BJD13_12310 15a4486a3463eb420dce76310d52b11c 579 PRINTS PR00987 Glutamyl-tRNA synthetase signature 38 50 8.0E-8 T 17-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BJD13_12310 15a4486a3463eb420dce76310d52b11c 579 PRINTS PR00987 Glutamyl-tRNA synthetase signature 216 226 8.0E-8 T 17-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BJD13_12310 15a4486a3463eb420dce76310d52b11c 579 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 364 556 2.9E-55 T 17-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BJD13_12310 15a4486a3463eb420dce76310d52b11c 579 Gene3D G3DSA:2.40.240.10 372 490 1.7E-73 T 17-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BJD13_12310 15a4486a3463eb420dce76310d52b11c 579 Gene3D G3DSA:3.90.800.10 107 215 2.4E-94 T 17-10-2018 BJD13_12310 15a4486a3463eb420dce76310d52b11c 579 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 277 360 7.3E-16 T 17-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 BJD13_12310 15a4486a3463eb420dce76310d52b11c 579 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 35 259 5.4E-76 T 17-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 BJD13_12310 15a4486a3463eb420dce76310d52b11c 579 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 577 52.358 T 17-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 BJD13_12310 15a4486a3463eb420dce76310d52b11c 579 Gene3D G3DSA:3.40.50.620 36 253 2.4E-94 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD13_12310 15a4486a3463eb420dce76310d52b11c 579 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 41 52 - T 17-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD13_12310 15a4486a3463eb420dce76310d52b11c 579 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 35 579 5.3E-202 T 17-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BJD13_12310 15a4486a3463eb420dce76310d52b11c 579 Gene3D G3DSA:2.40.240.10 364 574 1.7E-73 T 17-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BJD13_12310 15a4486a3463eb420dce76310d52b11c 579 SUPERFAMILY SSF52374 19 361 4.74E-89 T 17-10-2018 BJD13_02455 95d24c114d2a8f1682060ee517aa7053 598 Pfam PF00082 Subtilase family 352 451 2.4E-10 T 17-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 BJD13_02455 95d24c114d2a8f1682060ee517aa7053 598 PRINTS PR00723 Subtilisin serine protease family (S8) signature 85 104 1.1E-17 T 17-10-2018 IPR015500 Peptidase S8, subtilisin-related BJD13_02455 95d24c114d2a8f1682060ee517aa7053 598 PRINTS PR00723 Subtilisin serine protease family (S8) signature 378 394 1.1E-17 T 17-10-2018 IPR015500 Peptidase S8, subtilisin-related BJD13_02455 95d24c114d2a8f1682060ee517aa7053 598 PRINTS PR00723 Subtilisin serine protease family (S8) signature 128 141 1.1E-17 T 17-10-2018 IPR015500 Peptidase S8, subtilisin-related BJD13_02455 95d24c114d2a8f1682060ee517aa7053 598 Gene3D G3DSA:2.60.120.260 468 598 4.9E-29 T 17-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD13_02455 95d24c114d2a8f1682060ee517aa7053 598 SUPERFAMILY SSF49785 496 598 5.1E-18 T 17-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD13_02455 95d24c114d2a8f1682060ee517aa7053 598 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 132 142 - T 17-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site BJD13_02455 95d24c114d2a8f1682060ee517aa7053 598 Pfam PF00082 Subtilase family 85 299 9.8E-20 T 17-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 BJD13_02455 95d24c114d2a8f1682060ee517aa7053 598 Gene3D G3DSA:3.40.50.200 36 466 2.0E-102 T 17-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BJD13_02455 95d24c114d2a8f1682060ee517aa7053 598 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 379 389 - T 17-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site BJD13_02455 95d24c114d2a8f1682060ee517aa7053 598 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 90 101 - T 17-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site BJD13_02455 95d24c114d2a8f1682060ee517aa7053 598 Pfam PF01483 Proprotein convertase P-domain 505 595 1.6E-17 T 17-10-2018 IPR002884 P domain GO:0004252|GO:0006508 BJD13_02455 95d24c114d2a8f1682060ee517aa7053 598 SUPERFAMILY SSF52743 42 463 2.62E-66 T 17-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BJD13_08965 b0f244a188e33eefb9a77c78e238bb6c 480 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 185 203 2.4E-35 T 17-10-2018 BJD13_08965 b0f244a188e33eefb9a77c78e238bb6c 480 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 276 292 2.4E-35 T 17-10-2018 BJD13_08965 b0f244a188e33eefb9a77c78e238bb6c 480 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 305 327 2.4E-35 T 17-10-2018 BJD13_08965 b0f244a188e33eefb9a77c78e238bb6c 480 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 2.4E-35 T 17-10-2018 BJD13_08965 b0f244a188e33eefb9a77c78e238bb6c 480 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 146 164 2.4E-35 T 17-10-2018 BJD13_08965 b0f244a188e33eefb9a77c78e238bb6c 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 47 62 2.7E-72 T 17-10-2018 BJD13_08965 b0f244a188e33eefb9a77c78e238bb6c 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 277 291 2.7E-72 T 17-10-2018 BJD13_08965 b0f244a188e33eefb9a77c78e238bb6c 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 2.7E-72 T 17-10-2018 BJD13_08965 b0f244a188e33eefb9a77c78e238bb6c 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 355 376 2.7E-72 T 17-10-2018 BJD13_08965 b0f244a188e33eefb9a77c78e238bb6c 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 442 462 2.7E-72 T 17-10-2018 BJD13_08965 b0f244a188e33eefb9a77c78e238bb6c 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 149 158 2.7E-72 T 17-10-2018 BJD13_08965 b0f244a188e33eefb9a77c78e238bb6c 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 185 210 2.7E-72 T 17-10-2018 BJD13_08965 b0f244a188e33eefb9a77c78e238bb6c 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 320 327 2.7E-72 T 17-10-2018 BJD13_08965 b0f244a188e33eefb9a77c78e238bb6c 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 420 435 2.7E-72 T 17-10-2018 BJD13_08965 b0f244a188e33eefb9a77c78e238bb6c 480 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 48 58 - T 17-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 BJD13_08965 b0f244a188e33eefb9a77c78e238bb6c 480 PIRSF PIRSF000350 1 478 7.1E-74 T 17-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 BJD13_08965 b0f244a188e33eefb9a77c78e238bb6c 480 SUPERFAMILY SSF55424 356 477 4.47E-42 T 17-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 BJD13_08965 b0f244a188e33eefb9a77c78e238bb6c 480 Gene3D G3DSA:3.50.50.60 165 290 4.6E-105 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_08965 b0f244a188e33eefb9a77c78e238bb6c 480 Gene3D G3DSA:3.30.390.30 358 480 3.2E-45 T 17-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 BJD13_08965 b0f244a188e33eefb9a77c78e238bb6c 480 SUPERFAMILY SSF51905 4 349 3.28E-58 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_08965 b0f244a188e33eefb9a77c78e238bb6c 480 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 359 467 1.1E-36 T 17-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 BJD13_08965 b0f244a188e33eefb9a77c78e238bb6c 480 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 340 7.9E-64 T 17-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BJD13_08965 b0f244a188e33eefb9a77c78e238bb6c 480 Gene3D G3DSA:3.50.50.60 7 345 4.6E-105 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_08965 b0f244a188e33eefb9a77c78e238bb6c 480 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 6 477 1.9E-151 T 17-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 BJD13_07545 beefff8018294b21b4093320ecbfa3b4 351 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 17-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 BJD13_07545 beefff8018294b21b4093320ecbfa3b4 351 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 79 98 - T 17-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 BJD13_07545 beefff8018294b21b4093320ecbfa3b4 351 PIRSF PIRSF000164 12 344 2.5E-97 T 17-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 BJD13_07545 beefff8018294b21b4093320ecbfa3b4 351 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 2 340 4.2E-126 T 17-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 BJD13_07545 beefff8018294b21b4093320ecbfa3b4 351 SUPERFAMILY SSF51395 1 338 3.33E-102 T 17-10-2018 BJD13_07545 beefff8018294b21b4093320ecbfa3b4 351 Pfam PF01180 Dihydroorotate dehydrogenase 48 333 1.3E-89 T 17-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 BJD13_07545 beefff8018294b21b4093320ecbfa3b4 351 Gene3D G3DSA:3.20.20.70 1 336 3.7E-130 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD13_07545 beefff8018294b21b4093320ecbfa3b4 351 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 1 336 49.989 T 17-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 BJD13_03240 165220332ba93758f41713c2817d813e 350 PIRSF PIRSF028415 1 350 2.3E-216 T 17-10-2018 IPR014545 Uncharacterised conserved protein UCP028415 BJD13_03240 165220332ba93758f41713c2817d813e 350 Pfam PF10030 Uncharacterized protein conserved in bacteria (DUF2272) 78 300 2.0E-103 T 17-10-2018 IPR019262 Domain of unknown function DUF2272 BJD13_07250 fea8b0296f9f16755e00231bcd445de0 835 Gene3D G3DSA:3.30.2130.10 397 479 3.6E-23 T 17-10-2018 BJD13_07250 fea8b0296f9f16755e00231bcd445de0 835 Gene3D G3DSA:3.30.2130.10 312 396 1.6E-20 T 17-10-2018 BJD13_07250 fea8b0296f9f16755e00231bcd445de0 835 Gene3D G3DSA:3.30.360.10 640 810 2.7E-123 T 17-10-2018 BJD13_07250 fea8b0296f9f16755e00231bcd445de0 835 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 20 474 8.9E-108 T 17-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BJD13_07250 fea8b0296f9f16755e00231bcd445de0 835 SUPERFAMILY SSF55347 629 812 2.94E-48 T 17-10-2018 BJD13_07250 fea8b0296f9f16755e00231bcd445de0 835 PIRSF PIRSF000727 20 832 0.0 T 17-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BJD13_07250 fea8b0296f9f16755e00231bcd445de0 835 SUPERFAMILY SSF55021 320 396 3.52E-20 T 17-10-2018 BJD13_07250 fea8b0296f9f16755e00231bcd445de0 835 SUPERFAMILY SSF53633 21 313 1.2E-73 T 17-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BJD13_07250 fea8b0296f9f16755e00231bcd445de0 835 SUPERFAMILY SSF55021 402 488 5.24E-21 T 17-10-2018 BJD13_07250 fea8b0296f9f16755e00231bcd445de0 835 Pfam PF13840 ACT domain 409 469 2.0E-7 T 17-10-2018 IPR027795 CASTOR, ACT domain BJD13_07250 fea8b0296f9f16755e00231bcd445de0 835 Pfam PF13840 ACT domain 328 389 5.3E-8 T 17-10-2018 IPR027795 CASTOR, ACT domain BJD13_07250 fea8b0296f9f16755e00231bcd445de0 835 Gene3D G3DSA:3.40.50.720 482 828 2.7E-123 T 17-10-2018 BJD13_07250 fea8b0296f9f16755e00231bcd445de0 835 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 675 697 - T 17-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 BJD13_07250 fea8b0296f9f16755e00231bcd445de0 835 SUPERFAMILY SSF51735 479 651 9.81E-34 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_07250 fea8b0296f9f16755e00231bcd445de0 835 Pfam PF00742 Homoserine dehydrogenase 629 825 2.0E-50 T 17-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 BJD13_07250 fea8b0296f9f16755e00231bcd445de0 835 Pfam PF00696 Amino acid kinase family 20 300 8.5E-43 T 17-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 BJD13_07250 fea8b0296f9f16755e00231bcd445de0 835 ProSitePatterns PS00324 Aspartokinase signature. 22 30 - T 17-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BJD13_07250 fea8b0296f9f16755e00231bcd445de0 835 Gene3D G3DSA:3.40.1160.10 19 311 2.6E-90 T 17-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BJD13_07250 fea8b0296f9f16755e00231bcd445de0 835 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 487 621 4.2E-22 T 17-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 BJD13_18605 a07763dc5fb84daf83ec7386e96d8f33 243 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 190 1.8E-7 T 17-10-2018 BJD13_18605 a07763dc5fb84daf83ec7386e96d8f33 243 Gene3D G3DSA:3.40.50.720 2 243 2.2E-73 T 17-10-2018 BJD13_18605 a07763dc5fb84daf83ec7386e96d8f33 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.5E-39 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_18605 a07763dc5fb84daf83ec7386e96d8f33 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.5E-39 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_18605 a07763dc5fb84daf83ec7386e96d8f33 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.5E-39 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_18605 a07763dc5fb84daf83ec7386e96d8f33 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 1.5E-39 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_18605 a07763dc5fb84daf83ec7386e96d8f33 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 1.5E-39 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_18605 a07763dc5fb84daf83ec7386e96d8f33 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.5E-39 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_18605 a07763dc5fb84daf83ec7386e96d8f33 243 SUPERFAMILY SSF51735 6 242 2.25E-70 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_18605 a07763dc5fb84daf83ec7386e96d8f33 243 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 242 2.2E-50 T 17-10-2018 BJD13_18605 a07763dc5fb84daf83ec7386e96d8f33 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.4E-10 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_18605 a07763dc5fb84daf83ec7386e96d8f33 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 1.4E-10 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_18605 a07763dc5fb84daf83ec7386e96d8f33 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.4E-10 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_11505 30659ffeeb7b5e8609efd6b75f3384c5 422 Pfam PF08448 PAS fold 12 119 1.1E-16 T 17-10-2018 IPR013656 PAS fold-4 BJD13_11505 30659ffeeb7b5e8609efd6b75f3384c5 422 Gene3D G3DSA:3.30.450.20 1 130 6.8E-17 T 17-10-2018 BJD13_11505 30659ffeeb7b5e8609efd6b75f3384c5 422 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 3 123 8.2E-10 T 17-10-2018 IPR000014 PAS domain BJD13_11505 30659ffeeb7b5e8609efd6b75f3384c5 422 SMART SM00091 3 70 0.0091 T 17-10-2018 IPR000014 PAS domain BJD13_11505 30659ffeeb7b5e8609efd6b75f3384c5 422 SUPERFAMILY SSF47384 180 254 2.94E-5 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD13_11505 30659ffeeb7b5e8609efd6b75f3384c5 422 SMART SM00387 299 420 1.4E-17 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_11505 30659ffeeb7b5e8609efd6b75f3384c5 422 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 302 417 6.0E-13 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_11505 30659ffeeb7b5e8609efd6b75f3384c5 422 SUPERFAMILY SSF55874 250 418 1.07E-31 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_11505 30659ffeeb7b5e8609efd6b75f3384c5 422 Gene3D G3DSA:3.30.565.10 259 421 9.4E-34 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_11505 30659ffeeb7b5e8609efd6b75f3384c5 422 PRINTS PR00344 Bacterial sensor protein C-terminal signature 349 363 4.1E-13 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_11505 30659ffeeb7b5e8609efd6b75f3384c5 422 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 398 4.1E-13 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_11505 30659ffeeb7b5e8609efd6b75f3384c5 422 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 377 4.1E-13 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_11505 30659ffeeb7b5e8609efd6b75f3384c5 422 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 417 4.1E-13 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_11505 30659ffeeb7b5e8609efd6b75f3384c5 422 SUPERFAMILY SSF55785 3 115 3.66E-13 T 17-10-2018 IPR035965 PAS domain superfamily BJD13_11505 30659ffeeb7b5e8609efd6b75f3384c5 422 Gene3D G3DSA:1.10.287.130 185 256 9.2E-10 T 17-10-2018 BJD13_15720 d98b1441ba3e039e761e05311f3b3838 387 PIRSF PIRSF016578 143 387 2.0E-12 T 17-10-2018 BJD13_15720 d98b1441ba3e039e761e05311f3b3838 387 PIRSF PIRSF016578 13 111 0.57 T 17-10-2018 BJD13_15720 d98b1441ba3e039e761e05311f3b3838 387 Gene3D G3DSA:2.40.110.10 126 238 6.9E-45 T 17-10-2018 BJD13_15720 d98b1441ba3e039e761e05311f3b3838 387 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 12 123 3.1E-33 T 17-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 BJD13_15720 d98b1441ba3e039e761e05311f3b3838 387 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 341 360 - T 17-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 BJD13_15720 d98b1441ba3e039e761e05311f3b3838 387 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 129 141 - T 17-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 BJD13_15720 d98b1441ba3e039e761e05311f3b3838 387 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 127 222 1.7E-26 T 17-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 BJD13_15720 d98b1441ba3e039e761e05311f3b3838 387 SUPERFAMILY SSF47203 234 384 1.19E-46 T 17-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 BJD13_15720 d98b1441ba3e039e761e05311f3b3838 387 Gene3D G3DSA:1.20.140.10 239 383 2.5E-47 T 17-10-2018 BJD13_15720 d98b1441ba3e039e761e05311f3b3838 387 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 234 382 7.2E-43 T 17-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 BJD13_15720 d98b1441ba3e039e761e05311f3b3838 387 Gene3D G3DSA:1.10.540.10 1 125 5.8E-43 T 17-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 BJD13_15720 d98b1441ba3e039e761e05311f3b3838 387 SUPERFAMILY SSF56645 5 245 4.84E-82 T 17-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 BJD13_13520 7aea513287a2067b35d0bad93d2b137e 455 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 9 455 2.2E-204 T 17-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 BJD13_13520 7aea513287a2067b35d0bad93d2b137e 455 Gene3D G3DSA:1.10.8.60 347 452 9.2E-39 T 17-10-2018 BJD13_13520 7aea513287a2067b35d0bad93d2b137e 455 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 6 455 43.981 T 17-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 BJD13_13520 7aea513287a2067b35d0bad93d2b137e 455 SUPERFAMILY SSF52540 9 453 5.63E-90 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_13520 7aea513287a2067b35d0bad93d2b137e 455 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 58 109 1.0E-6 T 17-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BJD13_13520 7aea513287a2067b35d0bad93d2b137e 455 Pfam PF07724 AAA domain (Cdc48 subfamily) 195 341 1.5E-40 T 17-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BJD13_13520 7aea513287a2067b35d0bad93d2b137e 455 SMART SM00382 54 344 8.7E-11 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_13520 7aea513287a2067b35d0bad93d2b137e 455 SMART SM01086 347 446 9.5E-25 T 17-10-2018 IPR019489 Clp ATPase, C-terminal BJD13_13520 7aea513287a2067b35d0bad93d2b137e 455 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 347 415 1.3E-6 T 17-10-2018 IPR019489 Clp ATPase, C-terminal BJD13_16980 c867f6e2869c4516183f78771b314218 366 Gene3D G3DSA:3.10.150.10 248 366 4.5E-38 T 17-10-2018 BJD13_16980 c867f6e2869c4516183f78771b314218 366 SMART SM00480 17 362 3.6E-137 T 17-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 BJD13_16980 c867f6e2869c4516183f78771b314218 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 118 1.5E-37 T 17-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 BJD13_16980 c867f6e2869c4516183f78771b314218 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 3.6E-107 T 17-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 BJD13_16980 c867f6e2869c4516183f78771b314218 366 PIRSF PIRSF000804 1 366 7.0E-121 T 17-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 BJD13_16980 c867f6e2869c4516183f78771b314218 366 SUPERFAMILY SSF55979 127 244 5.8E-29 T 17-10-2018 BJD13_16980 c867f6e2869c4516183f78771b314218 366 Gene3D G3DSA:3.10.150.10 125 247 1.2E-38 T 17-10-2018 BJD13_16980 c867f6e2869c4516183f78771b314218 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 129 243 1.3E-36 T 17-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 BJD13_16980 c867f6e2869c4516183f78771b314218 366 Gene3D G3DSA:3.10.150.10 1 122 5.6E-42 T 17-10-2018 BJD13_16980 c867f6e2869c4516183f78771b314218 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 247 365 1.6E-34 T 17-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 BJD13_16980 c867f6e2869c4516183f78771b314218 366 SUPERFAMILY SSF55979 1 116 1.21E-26 T 17-10-2018 BJD13_16980 c867f6e2869c4516183f78771b314218 366 SUPERFAMILY SSF55979 246 366 2.9E-34 T 17-10-2018 BJD13_06250 4d483a8a51c9e2baf39fca966ed80eb6 790 Gene3D G3DSA:1.10.1040.10 196 317 3.0E-14 T 17-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BJD13_06250 4d483a8a51c9e2baf39fca966ed80eb6 790 Gene3D G3DSA:3.40.50.720 1 195 1.4E-53 T 17-10-2018 BJD13_06250 4d483a8a51c9e2baf39fca966ed80eb6 790 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 195 294 2.1E-9 T 17-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 BJD13_06250 4d483a8a51c9e2baf39fca966ed80eb6 790 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 10 192 6.3E-41 T 17-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 BJD13_06250 4d483a8a51c9e2baf39fca966ed80eb6 790 SUPERFAMILY SSF48179 193 312 3.49E-19 T 17-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BJD13_06250 4d483a8a51c9e2baf39fca966ed80eb6 790 SUPERFAMILY SSF51735 7 193 3.02E-40 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_06250 4d483a8a51c9e2baf39fca966ed80eb6 790 Pfam PF00378 Enoyl-CoA hydratase/isomerase 487 619 1.7E-15 T 17-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 BJD13_06250 4d483a8a51c9e2baf39fca966ed80eb6 790 Gene3D G3DSA:3.90.226.10 472 689 1.3E-26 T 17-10-2018 BJD13_06250 4d483a8a51c9e2baf39fca966ed80eb6 790 SUPERFAMILY SSF48179 345 458 1.96E-16 T 17-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BJD13_06250 4d483a8a51c9e2baf39fca966ed80eb6 790 SUPERFAMILY SSF52096 474 787 2.24E-37 T 17-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BJD13_03225 d9b3da6cde05af39f38c39761f0c8757 308 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 181 240 2.5E-17 T 17-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 BJD13_03225 d9b3da6cde05af39f38c39761f0c8757 308 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 11 219 4.5E-67 T 17-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD13_03225 d9b3da6cde05af39f38c39761f0c8757 308 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 245 299 5.9E-11 T 17-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD13_03225 d9b3da6cde05af39f38c39761f0c8757 308 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 32 180 3.6E-48 T 17-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 BJD13_03225 d9b3da6cde05af39f38c39761f0c8757 308 SUPERFAMILY SSF88697 244 300 2.34E-6 T 17-10-2018 IPR015947 PUA-like superfamily BJD13_03225 d9b3da6cde05af39f38c39761f0c8757 308 Gene3D G3DSA:3.30.2350.10 2 241 5.0E-80 T 17-10-2018 BJD13_03225 d9b3da6cde05af39f38c39761f0c8757 308 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 10 299 17.826 T 17-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD13_03225 d9b3da6cde05af39f38c39761f0c8757 308 SUPERFAMILY SSF55120 9 224 9.78E-72 T 17-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD13_11570 c69e1ee507b96971d9e87e09bf5c752c 508 Gene3D G3DSA:3.30.420.40 18 309 1.6E-83 T 17-10-2018 BJD13_11570 c69e1ee507b96971d9e87e09bf5c752c 508 PIRSF PIRSF001267 7 508 4.0E-201 T 17-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 BJD13_11570 c69e1ee507b96971d9e87e09bf5c752c 508 SUPERFAMILY SSF53067 17 137 4.21E-32 T 17-10-2018 BJD13_11570 c69e1ee507b96971d9e87e09bf5c752c 508 SUPERFAMILY SSF53067 142 314 1.65E-43 T 17-10-2018 BJD13_11570 c69e1ee507b96971d9e87e09bf5c752c 508 Gene3D G3DSA:1.10.3210.10 317 504 3.0E-56 T 17-10-2018 BJD13_11570 c69e1ee507b96971d9e87e09bf5c752c 508 Pfam PF02541 Ppx/GppA phosphatase family 30 313 7.3E-65 T 17-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 BJD13_11570 c69e1ee507b96971d9e87e09bf5c752c 508 Gene3D G3DSA:3.30.420.150 121 301 1.6E-83 T 17-10-2018 BJD13_11570 c69e1ee507b96971d9e87e09bf5c752c 508 SUPERFAMILY SSF109604 319 496 8.37E-48 T 17-10-2018 BJD13_11570 c69e1ee507b96971d9e87e09bf5c752c 508 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 17 312 1.3E-98 T 17-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 BJD13_09260 13359c9ae136631e5f3c3df4f3214692 505 SUPERFAMILY SSF117457 316 487 9.02E-63 T 17-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 BJD13_09260 13359c9ae136631e5f3c3df4f3214692 505 PIRSF PIRSF001394 1 505 1.7E-219 T 17-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 BJD13_09260 13359c9ae136631e5f3c3df4f3214692 505 Pfam PF05683 Fumarase C-terminus 289 488 3.2E-79 T 17-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 BJD13_09260 13359c9ae136631e5f3c3df4f3214692 505 Pfam PF05681 Fumarate hydratase (Fumerase) 11 285 1.5E-99 T 17-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 BJD13_09260 13359c9ae136631e5f3c3df4f3214692 505 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 285 2.7E-62 T 17-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 BJD13_09260 13359c9ae136631e5f3c3df4f3214692 505 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 325 487 1.7E-49 T 17-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 BJD13_09260 13359c9ae136631e5f3c3df4f3214692 505 Gene3D G3DSA:3.20.130.10 305 488 1.5E-60 T 17-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 BJD13_20220 dcc3cca718308f7d2f367881899236bb 339 Pfam PF05125 Phage major capsid protein, P2 family 8 335 3.0E-139 T 17-10-2018 IPR006441 Bacteriophage P2, GpN, major capsid BJD13_20220 dcc3cca718308f7d2f367881899236bb 339 TIGRFAM TIGR01551 major_capsid_P2: phage major capsid protein, P2 family 6 337 8.6E-163 T 17-10-2018 IPR006441 Bacteriophage P2, GpN, major capsid BJD13_09020 74e3e24713601fc43bc7f87971c59b2f 375 PRINTS PR00625 DnaJ domain signature 25 40 7.0E-29 T 17-10-2018 IPR001623 DnaJ domain BJD13_09020 74e3e24713601fc43bc7f87971c59b2f 375 PRINTS PR00625 DnaJ domain signature 42 62 7.0E-29 T 17-10-2018 IPR001623 DnaJ domain BJD13_09020 74e3e24713601fc43bc7f87971c59b2f 375 PRINTS PR00625 DnaJ domain signature 62 81 7.0E-29 T 17-10-2018 IPR001623 DnaJ domain BJD13_09020 74e3e24713601fc43bc7f87971c59b2f 375 PRINTS PR00625 DnaJ domain signature 7 25 7.0E-29 T 17-10-2018 IPR001623 DnaJ domain BJD13_09020 74e3e24713601fc43bc7f87971c59b2f 375 Gene3D G3DSA:2.60.260.20 114 245 2.0E-37 T 17-10-2018 BJD13_09020 74e3e24713601fc43bc7f87971c59b2f 375 Pfam PF00684 DnaJ central domain 144 203 1.4E-13 T 17-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 BJD13_09020 74e3e24713601fc43bc7f87971c59b2f 375 SMART SM00271 4 62 6.8E-31 T 17-10-2018 IPR001623 DnaJ domain BJD13_09020 74e3e24713601fc43bc7f87971c59b2f 375 Pfam PF00226 DnaJ domain 5 67 3.4E-26 T 17-10-2018 IPR001623 DnaJ domain BJD13_09020 74e3e24713601fc43bc7f87971c59b2f 375 SUPERFAMILY SSF49493 255 340 7.59E-20 T 17-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 BJD13_09020 74e3e24713601fc43bc7f87971c59b2f 375 Pfam PF01556 DnaJ C terminal domain 119 329 3.1E-40 T 17-10-2018 IPR002939 Chaperone DnaJ, C-terminal BJD13_09020 74e3e24713601fc43bc7f87971c59b2f 375 SUPERFAMILY SSF46565 1 105 1.15E-33 T 17-10-2018 IPR036869 Chaperone J-domain superfamily BJD13_09020 74e3e24713601fc43bc7f87971c59b2f 375 Gene3D G3DSA:2.10.230.10 144 203 2.0E-37 T 17-10-2018 BJD13_09020 74e3e24713601fc43bc7f87971c59b2f 375 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 345 7.0E-126 T 17-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 BJD13_09020 74e3e24713601fc43bc7f87971c59b2f 375 SUPERFAMILY SSF49493 111 258 9.94E-19 T 17-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 BJD13_09020 74e3e24713601fc43bc7f87971c59b2f 375 SUPERFAMILY SSF57938 131 207 7.32E-21 T 17-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily BJD13_09020 74e3e24713601fc43bc7f87971c59b2f 375 Gene3D G3DSA:1.10.287.110 1 113 4.6E-33 T 17-10-2018 IPR036869 Chaperone J-domain superfamily BJD13_09020 74e3e24713601fc43bc7f87971c59b2f 375 Gene3D G3DSA:2.60.260.20 250 359 1.6E-27 T 17-10-2018 BJD13_09020 74e3e24713601fc43bc7f87971c59b2f 375 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 369 39.532 T 17-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 BJD13_10000 7785db69f6a0c3ba90adb4c128ec3ee1 596 SMART SM00838 398 486 0.0041 T 17-10-2018 IPR000640 Elongation factor EFG, domain V-like BJD13_10000 7785db69f6a0c3ba90adb4c128ec3ee1 596 Gene3D G3DSA:2.40.30.10 187 285 1.1E-30 T 17-10-2018 BJD13_10000 7785db69f6a0c3ba90adb4c128ec3ee1 596 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 17-10-2018 IPR031157 Tr-type G domain, conserved site BJD13_10000 7785db69f6a0c3ba90adb4c128ec3ee1 596 SUPERFAMILY SSF54980 399 493 1.63E-23 T 17-10-2018 IPR035647 EF-G domain III/V-like BJD13_10000 7785db69f6a0c3ba90adb4c128ec3ee1 596 Pfam PF03144 Elongation factor Tu domain 2 205 275 1.0E-9 T 17-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 BJD13_10000 7785db69f6a0c3ba90adb4c128ec3ee1 596 Gene3D G3DSA:3.40.50.300 1 185 7.8E-71 T 17-10-2018 BJD13_10000 7785db69f6a0c3ba90adb4c128ec3ee1 596 Hamap MF_00071 Elongation factor 4 [lepA]. 1 596 297.598 T 17-10-2018 IPR006297 Elongation factor 4 GO:0005525 BJD13_10000 7785db69f6a0c3ba90adb4c128ec3ee1 596 Gene3D G3DSA:3.30.70.2570 480 553 4.8E-33 T 17-10-2018 IPR038363 LepA, C-terminal domain superfamily BJD13_10000 7785db69f6a0c3ba90adb4c128ec3ee1 596 TIGRFAM TIGR01393 lepA: elongation factor 4 3 595 1.9E-293 T 17-10-2018 IPR006297 Elongation factor 4 GO:0005525 BJD13_10000 7785db69f6a0c3ba90adb4c128ec3ee1 596 Pfam PF00009 Elongation factor Tu GTP binding domain 3 181 4.6E-52 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD13_10000 7785db69f6a0c3ba90adb4c128ec3ee1 596 Pfam PF06421 GTP-binding protein LepA C-terminus 487 593 1.6E-51 T 17-10-2018 IPR013842 GTP-binding protein LepA, C-terminal BJD13_10000 7785db69f6a0c3ba90adb4c128ec3ee1 596 SUPERFAMILY SSF54980 292 370 6.47E-19 T 17-10-2018 IPR035647 EF-G domain III/V-like BJD13_10000 7785db69f6a0c3ba90adb4c128ec3ee1 596 Gene3D G3DSA:3.30.70.870 286 367 4.4E-36 T 17-10-2018 BJD13_10000 7785db69f6a0c3ba90adb4c128ec3ee1 596 Gene3D G3DSA:3.30.70.3380 368 478 1.1E-38 T 17-10-2018 BJD13_10000 7785db69f6a0c3ba90adb4c128ec3ee1 596 SUPERFAMILY SSF52540 2 225 2.77E-54 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_10000 7785db69f6a0c3ba90adb4c128ec3ee1 596 Pfam PF00679 Elongation factor G C-terminus 399 477 1.3E-18 T 17-10-2018 IPR000640 Elongation factor EFG, domain V-like BJD13_10000 7785db69f6a0c3ba90adb4c128ec3ee1 596 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 172 5.4E-17 T 17-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BJD13_10000 7785db69f6a0c3ba90adb4c128ec3ee1 596 PRINTS PR00315 GTP-binding elongation factor signature 49 57 3.0E-14 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD13_10000 7785db69f6a0c3ba90adb4c128ec3ee1 596 PRINTS PR00315 GTP-binding elongation factor signature 126 135 3.0E-14 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD13_10000 7785db69f6a0c3ba90adb4c128ec3ee1 596 PRINTS PR00315 GTP-binding elongation factor signature 90 101 3.0E-14 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD13_10000 7785db69f6a0c3ba90adb4c128ec3ee1 596 PRINTS PR00315 GTP-binding elongation factor signature 74 84 3.0E-14 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD13_10000 7785db69f6a0c3ba90adb4c128ec3ee1 596 PRINTS PR00315 GTP-binding elongation factor signature 6 19 3.0E-14 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD13_17390 62fcffd4aaf374c67152fdcd9b6d6a75 421 SUPERFAMILY SSF56024 34 249 3.01E-47 T 17-10-2018 BJD13_17390 62fcffd4aaf374c67152fdcd9b6d6a75 421 Pfam PF13091 PLD-like domain 76 217 2.5E-12 T 17-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 BJD13_17390 62fcffd4aaf374c67152fdcd9b6d6a75 421 Pfam PF13091 PLD-like domain 263 388 1.3E-28 T 17-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 BJD13_17390 62fcffd4aaf374c67152fdcd9b6d6a75 421 SUPERFAMILY SSF56024 234 406 1.03E-37 T 17-10-2018 BJD13_17390 62fcffd4aaf374c67152fdcd9b6d6a75 421 Gene3D G3DSA:3.30.870.10 246 392 9.4E-29 T 17-10-2018 BJD13_17390 62fcffd4aaf374c67152fdcd9b6d6a75 421 SMART SM00155 334 361 0.0022 T 17-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 BJD13_17390 62fcffd4aaf374c67152fdcd9b6d6a75 421 SMART SM00155 157 184 8.1 T 17-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 BJD13_17390 62fcffd4aaf374c67152fdcd9b6d6a75 421 Gene3D G3DSA:3.30.870.10 53 245 1.9E-44 T 17-10-2018 BJD13_09100 eeafa53a6fc8a966a61027ea0f793d19 566 Gene3D G3DSA:3.30.70.270 394 561 4.7E-56 T 17-10-2018 BJD13_09100 eeafa53a6fc8a966a61027ea0f793d19 566 Pfam PF05227 CHASE3 domain 39 173 1.5E-30 T 17-10-2018 IPR007891 CHASE3 BJD13_09100 eeafa53a6fc8a966a61027ea0f793d19 566 SUPERFAMILY SSF55073 402 558 1.57E-47 T 17-10-2018 IPR029787 Nucleotide cyclase BJD13_09100 eeafa53a6fc8a966a61027ea0f793d19 566 SUPERFAMILY SSF55781 254 396 1.02E-12 T 17-10-2018 BJD13_09100 eeafa53a6fc8a966a61027ea0f793d19 566 SMART SM00065 254 394 0.0041 T 17-10-2018 IPR003018 GAF domain GO:0005515 BJD13_09100 eeafa53a6fc8a966a61027ea0f793d19 566 Pfam PF00990 Diguanylate cyclase, GGDEF domain 398 555 1.2E-45 T 17-10-2018 IPR000160 GGDEF domain BJD13_09100 eeafa53a6fc8a966a61027ea0f793d19 566 SMART SM00267 386 559 9.3E-65 T 17-10-2018 IPR000160 GGDEF domain BJD13_09100 eeafa53a6fc8a966a61027ea0f793d19 566 Pfam PF13185 GAF domain 253 385 2.1E-8 T 17-10-2018 IPR003018 GAF domain GO:0005515 BJD13_09100 eeafa53a6fc8a966a61027ea0f793d19 566 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 393 558 1.0E-52 T 17-10-2018 IPR000160 GGDEF domain BJD13_09100 eeafa53a6fc8a966a61027ea0f793d19 566 Gene3D G3DSA:3.30.450.40 229 393 2.7E-13 T 17-10-2018 IPR029016 GAF-like domain superfamily BJD13_09100 eeafa53a6fc8a966a61027ea0f793d19 566 Gene3D G3DSA:1.20.1440.210 45 171 9.9E-22 T 17-10-2018 BJD13_15210 ceee9c2827d932f768d3b8d8c4573293 181 SUPERFAMILY SSF51161 3 175 3.88E-45 T 17-10-2018 IPR011004 Trimeric LpxA-like superfamily BJD13_15210 ceee9c2827d932f768d3b8d8c4573293 181 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 97 130 4.6E-4 T 17-10-2018 IPR001451 Hexapeptide repeat BJD13_15210 ceee9c2827d932f768d3b8d8c4573293 181 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 13 46 1.8E-5 T 17-10-2018 IPR001451 Hexapeptide repeat BJD13_15210 ceee9c2827d932f768d3b8d8c4573293 181 Gene3D G3DSA:2.160.10.10 3 178 6.0E-58 T 17-10-2018 BJD13_19985 d1140568c1eadad9dc1557816df184f1 304 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 12 284 1.4E-45 T 17-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 BJD13_19985 d1140568c1eadad9dc1557816df184f1 304 PIRSF PIRSF026649 1 295 3.7E-76 T 17-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 BJD13_04100 a5a247f866bb22caf1eb709942aa798a 153 SUPERFAMILY SSF47188 1 126 1.44E-34 T 17-10-2018 IPR035938 Hemerythrin-like superfamily BJD13_04100 a5a247f866bb22caf1eb709942aa798a 153 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 6 126 1.5E-37 T 17-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 BJD13_04100 a5a247f866bb22caf1eb709942aa798a 153 Gene3D G3DSA:1.20.120.50 1 130 1.5E-35 T 17-10-2018 IPR035938 Hemerythrin-like superfamily BJD13_04100 a5a247f866bb22caf1eb709942aa798a 153 ProSitePatterns PS00550 Hemerythrin family signature. 57 80 - T 17-10-2018 IPR016131 Haemerythrin, iron-binding site GO:0046872 BJD13_04100 a5a247f866bb22caf1eb709942aa798a 153 Pfam PF01814 Hemerythrin HHE cation binding domain 13 126 4.3E-14 T 17-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 BJD13_14245 638f94f06e075b6c6b3bff8de73524bc 306 PIRSF PIRSF000401 1 306 2.3E-94 T 17-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 BJD13_14245 638f94f06e075b6c6b3bff8de73524bc 306 Gene3D G3DSA:3.40.50.150 106 305 1.4E-48 T 17-10-2018 BJD13_14245 638f94f06e075b6c6b3bff8de73524bc 306 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 304 30.525 T 17-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 BJD13_14245 638f94f06e075b6c6b3bff8de73524bc 306 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 304 1.1E-89 T 17-10-2018 BJD13_14245 638f94f06e075b6c6b3bff8de73524bc 306 SUPERFAMILY SSF53335 54 298 2.22E-37 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_14245 638f94f06e075b6c6b3bff8de73524bc 306 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 297 1.0E-64 T 17-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 BJD13_16055 1a0cfefced6baa39966b35215612e0cb 336 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 129 1.7E-8 T 17-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 BJD13_16055 1a0cfefced6baa39966b35215612e0cb 336 SUPERFAMILY SSF50129 8 165 2.99E-30 T 17-10-2018 IPR011032 GroES-like superfamily BJD13_16055 1a0cfefced6baa39966b35215612e0cb 336 Gene3D G3DSA:3.40.50.720 142 284 1.9E-91 T 17-10-2018 BJD13_16055 1a0cfefced6baa39966b35215612e0cb 336 Pfam PF00107 Zinc-binding dehydrogenase 171 297 1.9E-26 T 17-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 BJD13_16055 1a0cfefced6baa39966b35215612e0cb 336 SMART SM00829 11 334 3.3E-17 T 17-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 BJD13_16055 1a0cfefced6baa39966b35215612e0cb 336 SUPERFAMILY SSF51735 136 314 2.85E-44 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_16055 1a0cfefced6baa39966b35215612e0cb 336 Gene3D G3DSA:3.90.180.10 19 326 1.9E-91 T 17-10-2018 BJD13_11170 a535e9bdb853e95a6344561b2195d565 690 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 233 359 3.2E-24 T 17-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 BJD13_11170 a535e9bdb853e95a6344561b2195d565 690 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 1.9E-5 T 17-10-2018 IPR001270 ClpA/B family GO:0005524 BJD13_11170 a535e9bdb853e95a6344561b2195d565 690 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 1.9E-5 T 17-10-2018 IPR001270 ClpA/B family GO:0005524 BJD13_11170 a535e9bdb853e95a6344561b2195d565 690 Gene3D G3DSA:3.40.50.300 13 177 9.4E-102 T 17-10-2018 BJD13_11170 a535e9bdb853e95a6344561b2195d565 690 Gene3D G3DSA:1.10.8.60 8 240 9.4E-102 T 17-10-2018 BJD13_11170 a535e9bdb853e95a6344561b2195d565 690 SUPERFAMILY SSF52540 34 223 3.25E-58 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_11170 a535e9bdb853e95a6344561b2195d565 690 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 353 5.6E-125 T 17-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 BJD13_11170 a535e9bdb853e95a6344561b2195d565 690 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 565 685 4.1E-12 T 17-10-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD13_11170 a535e9bdb853e95a6344561b2195d565 690 SMART SM00382 37 188 1.8E-8 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_11170 a535e9bdb853e95a6344561b2195d565 690 Gene3D G3DSA:1.20.272.10 242 359 6.1E-36 T 17-10-2018 BJD13_11170 a535e9bdb853e95a6344561b2195d565 690 Pfam PF13177 DNA polymerase III, delta subunit 20 178 5.4E-45 T 17-10-2018 BJD13_11170 a535e9bdb853e95a6344561b2195d565 690 Gene3D G3DSA:3.30.300.150 554 670 1.2E-13 T 17-10-2018 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD13_11170 a535e9bdb853e95a6344561b2195d565 690 SUPERFAMILY SSF48019 243 360 2.04E-28 T 17-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 BJD13_12470 4e343fb6c96d989b08e4e0176d9d5716 323 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 6 319 3.0E-116 T 17-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 BJD13_12470 4e343fb6c96d989b08e4e0176d9d5716 323 SUPERFAMILY SSF53659 4 322 2.12E-102 T 17-10-2018 BJD13_12470 4e343fb6c96d989b08e4e0176d9d5716 323 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 34 315 5.1E-99 T 17-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 BJD13_12470 4e343fb6c96d989b08e4e0176d9d5716 323 Gene3D G3DSA:3.40.718.10 2 323 2.6E-112 T 17-10-2018 BJD13_12470 4e343fb6c96d989b08e4e0176d9d5716 323 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 3 323 35.095 T 17-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 BJD13_06810 323ded0e6a2ea7300e307e1fcf4776ac 669 SUPERFAMILY SSF47226 5 129 4.58E-32 T 17-10-2018 IPR036641 HPT domain superfamily GO:0000160 BJD13_06810 323ded0e6a2ea7300e307e1fcf4776ac 669 Pfam PF01627 Hpt domain 10 100 1.4E-18 T 17-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BJD13_06810 323ded0e6a2ea7300e307e1fcf4776ac 669 SMART SM01231 281 344 4.3E-18 T 17-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 BJD13_06810 323ded0e6a2ea7300e307e1fcf4776ac 669 SUPERFAMILY SSF55874 346 527 1.26E-37 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_06810 323ded0e6a2ea7300e307e1fcf4776ac 669 Pfam PF01584 CheW-like domain 534 663 4.5E-27 T 17-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BJD13_06810 323ded0e6a2ea7300e307e1fcf4776ac 669 PRINTS PR00344 Bacterial sensor protein C-terminal signature 513 526 4.7E-13 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_06810 323ded0e6a2ea7300e307e1fcf4776ac 669 PRINTS PR00344 Bacterial sensor protein C-terminal signature 473 483 4.7E-13 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_06810 323ded0e6a2ea7300e307e1fcf4776ac 669 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 448 4.7E-13 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_06810 323ded0e6a2ea7300e307e1fcf4776ac 669 PRINTS PR00344 Bacterial sensor protein C-terminal signature 489 507 4.7E-13 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_06810 323ded0e6a2ea7300e307e1fcf4776ac 669 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 282 342 8.9E-16 T 17-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 BJD13_06810 323ded0e6a2ea7300e307e1fcf4776ac 669 Gene3D G3DSA:1.20.120.160 1 144 1.4E-39 T 17-10-2018 IPR036641 HPT domain superfamily GO:0000160 BJD13_06810 323ded0e6a2ea7300e307e1fcf4776ac 669 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 392 528 1.2E-15 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_06810 323ded0e6a2ea7300e307e1fcf4776ac 669 SUPERFAMILY SSF47384 282 345 6.67E-14 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD13_06810 323ded0e6a2ea7300e307e1fcf4776ac 669 SMART SM00387 389 529 9.3E-26 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_06810 323ded0e6a2ea7300e307e1fcf4776ac 669 Gene3D G3DSA:2.30.30.40 529 656 1.3E-37 T 17-10-2018 BJD13_06810 323ded0e6a2ea7300e307e1fcf4776ac 669 Gene3D G3DSA:2.40.50.180 552 615 1.3E-37 T 17-10-2018 BJD13_06810 323ded0e6a2ea7300e307e1fcf4776ac 669 Gene3D G3DSA:3.30.565.10 345 528 1.3E-53 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_06810 323ded0e6a2ea7300e307e1fcf4776ac 669 SMART SM00260 521 660 7.4E-34 T 17-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BJD13_06810 323ded0e6a2ea7300e307e1fcf4776ac 669 SMART SM00073 4 102 2.6E-29 T 17-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BJD13_06810 323ded0e6a2ea7300e307e1fcf4776ac 669 Gene3D G3DSA:1.10.287.560 281 344 4.8E-15 T 17-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 BJD13_06810 323ded0e6a2ea7300e307e1fcf4776ac 669 SUPERFAMILY SSF50341 528 660 1.01E-31 T 17-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 BJD13_06820 918470b80829f85010d354983446835b 757 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 507 660 8.8E-53 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD13_06820 918470b80829f85010d354983446835b 757 SMART SM00283 446 693 1.6E-88 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD13_06820 918470b80829f85010d354983446835b 757 SMART SM00304 393 445 6.0 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_06820 918470b80829f85010d354983446835b 757 SMART SM00304 212 264 4.8E-9 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_06820 918470b80829f85010d354983446835b 757 Pfam PF00672 HAMP domain 213 260 7.6E-9 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_06820 918470b80829f85010d354983446835b 757 SUPERFAMILY SSF158472 213 261 1.96E-8 T 17-10-2018 BJD13_06820 918470b80829f85010d354983446835b 757 Gene3D G3DSA:1.20.120.1530 204 350 2.8E-42 T 17-10-2018 BJD13_06820 918470b80829f85010d354983446835b 757 SUPERFAMILY SSF58104 413 694 2.09E-70 T 17-10-2018 BJD13_06820 918470b80829f85010d354983446835b 757 Pfam PF12729 Four helix bundle sensory module for signal transduction 7 173 1.9E-16 T 17-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain BJD13_06820 918470b80829f85010d354983446835b 757 Gene3D G3DSA:1.10.287.950 395 695 5.5E-85 T 17-10-2018 BJD13_07635 3e9d1939bba22a38d74f27393cca2a2e 114 Gene3D G3DSA:3.40.1620.10 24 61 4.2E-6 T 17-10-2018 BJD13_07635 3e9d1939bba22a38d74f27393cca2a2e 114 SUPERFAMILY SSF143120 23 71 2.35E-8 T 17-10-2018 IPR036165 YefM-like superfamily BJD13_07635 3e9d1939bba22a38d74f27393cca2a2e 114 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 26 61 5.7E-8 T 17-10-2018 BJD13_07635 3e9d1939bba22a38d74f27393cca2a2e 114 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 25 74 1.7E-8 T 17-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM BJD13_21780 55ef16831bfe7cc53e084205048ecc62 881 Gene3D G3DSA:3.30.450.20 355 482 2.9E-11 T 17-10-2018 BJD13_21780 55ef16831bfe7cc53e084205048ecc62 881 SUPERFAMILY SSF52172 759 877 1.12E-22 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_21780 55ef16831bfe7cc53e084205048ecc62 881 SMART SM00448 761 873 9.9E-17 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_21780 55ef16831bfe7cc53e084205048ecc62 881 SUPERFAMILY SSF47384 502 582 1.08E-11 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD13_21780 55ef16831bfe7cc53e084205048ecc62 881 Pfam PF12860 PAS fold 369 482 2.9E-40 T 17-10-2018 BJD13_21780 55ef16831bfe7cc53e084205048ecc62 881 Pfam PF00072 Response regulator receiver domain 763 873 6.3E-17 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_21780 55ef16831bfe7cc53e084205048ecc62 881 PRINTS PR00344 Bacterial sensor protein C-terminal signature 695 713 5.0E-12 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_21780 55ef16831bfe7cc53e084205048ecc62 881 PRINTS PR00344 Bacterial sensor protein C-terminal signature 719 732 5.0E-12 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_21780 55ef16831bfe7cc53e084205048ecc62 881 PRINTS PR00344 Bacterial sensor protein C-terminal signature 679 689 5.0E-12 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_21780 55ef16831bfe7cc53e084205048ecc62 881 PRINTS PR00344 Bacterial sensor protein C-terminal signature 661 675 5.0E-12 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_21780 55ef16831bfe7cc53e084205048ecc62 881 Gene3D G3DSA:1.10.287.130 483 579 9.2E-15 T 17-10-2018 BJD13_21780 55ef16831bfe7cc53e084205048ecc62 881 Gene3D G3DSA:3.40.50.2300 758 881 1.7E-20 T 17-10-2018 BJD13_21780 55ef16831bfe7cc53e084205048ecc62 881 SUPERFAMILY SSF55874 570 733 9.69E-38 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_21780 55ef16831bfe7cc53e084205048ecc62 881 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 626 734 1.8E-18 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_21780 55ef16831bfe7cc53e084205048ecc62 881 Gene3D G3DSA:3.30.565.10 585 732 8.5E-34 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_21780 55ef16831bfe7cc53e084205048ecc62 881 SUPERFAMILY SSF55785 355 466 1.11E-7 T 17-10-2018 IPR035965 PAS domain superfamily BJD13_21780 55ef16831bfe7cc53e084205048ecc62 881 Pfam PF00512 His Kinase A (phospho-acceptor) domain 517 581 2.9E-9 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_21780 55ef16831bfe7cc53e084205048ecc62 881 SUPERFAMILY SSF103190 54 191 6.8E-14 T 17-10-2018 IPR029151 Periplasmic sensor-like domain superfamily BJD13_21780 55ef16831bfe7cc53e084205048ecc62 881 Pfam PF02743 Cache domain 45 193 3.5E-13 T 17-10-2018 IPR033479 Double Cache domain 1 BJD13_21780 55ef16831bfe7cc53e084205048ecc62 881 SMART SM00387 625 735 1.4E-28 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_21780 55ef16831bfe7cc53e084205048ecc62 881 Gene3D G3DSA:3.30.450.20 59 181 6.6E-70 T 17-10-2018 BJD13_21780 55ef16831bfe7cc53e084205048ecc62 881 Gene3D G3DSA:3.30.450.20 46 287 6.6E-70 T 17-10-2018 BJD13_21780 55ef16831bfe7cc53e084205048ecc62 881 SMART SM00388 516 581 2.3E-11 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_20540 0fd5ff60f2ab7c073690ccb498824fd4 168 Gene3D G3DSA:1.20.1260.10 1 166 9.0E-66 T 17-10-2018 IPR012347 Ferritin-like BJD13_20540 0fd5ff60f2ab7c073690ccb498824fd4 168 SUPERFAMILY SSF47240 1 154 1.67E-56 T 17-10-2018 IPR009078 Ferritin-like superfamily BJD13_20540 0fd5ff60f2ab7c073690ccb498824fd4 168 Pfam PF05974 Domain of unknown function (DUF892) 5 161 4.6E-61 T 17-10-2018 IPR010287 Domain of unknown function DUF892 BJD13_01880 001c801c9dd19b8d98dfbf7105548a13 497 Gene3D G3DSA:3.40.630.10 1 227 5.4E-54 T 17-10-2018 BJD13_01880 001c801c9dd19b8d98dfbf7105548a13 497 Gene3D G3DSA:3.40.630.10 351 473 6.8E-21 T 17-10-2018 BJD13_01880 001c801c9dd19b8d98dfbf7105548a13 497 SUPERFAMILY SSF53187 13 468 8.68E-48 T 17-10-2018 BJD13_01880 001c801c9dd19b8d98dfbf7105548a13 497 Pfam PF07687 Peptidase dimerisation domain 207 367 8.6E-13 T 17-10-2018 IPR011650 Peptidase M20, dimerisation domain BJD13_01880 001c801c9dd19b8d98dfbf7105548a13 497 Pfam PF01546 Peptidase family M20/M25/M40 95 466 5.3E-21 T 17-10-2018 IPR002933 Peptidase M20 GO:0016787 BJD13_14465 d55d87b335fbd1dad6ce9be6ae3d8f91 238 SUPERFAMILY SSF56784 13 215 7.31E-21 T 17-10-2018 IPR036412 HAD-like superfamily BJD13_14465 d55d87b335fbd1dad6ce9be6ae3d8f91 238 Gene3D G3DSA:3.40.50.1000 15 212 4.8E-25 T 17-10-2018 IPR023214 HAD superfamily BJD13_14465 d55d87b335fbd1dad6ce9be6ae3d8f91 238 Pfam PF12710 haloacid dehalogenase-like hydrolase 15 197 2.3E-25 T 17-10-2018 BJD13_14465 d55d87b335fbd1dad6ce9be6ae3d8f91 238 Gene3D G3DSA:1.20.1440.100 26 103 4.8E-25 T 17-10-2018 BJD13_11475 44b3778ddf4e3c03e66c3cf5529d3e49 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.8E-19 T 17-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BJD13_11475 44b3778ddf4e3c03e66c3cf5529d3e49 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.8E-19 T 17-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BJD13_11475 44b3778ddf4e3c03e66c3cf5529d3e49 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.8E-19 T 17-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BJD13_11475 44b3778ddf4e3c03e66c3cf5529d3e49 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 17-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 BJD13_11475 44b3778ddf4e3c03e66c3cf5529d3e49 90 SMART SM00411 1 90 7.2E-45 T 17-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BJD13_11475 44b3778ddf4e3c03e66c3cf5529d3e49 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.2E-34 T 17-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BJD13_11475 44b3778ddf4e3c03e66c3cf5529d3e49 90 Gene3D G3DSA:4.10.520.10 1 90 4.4E-37 T 17-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 BJD13_11475 44b3778ddf4e3c03e66c3cf5529d3e49 90 SUPERFAMILY SSF47729 1 90 5.0E-33 T 17-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 BJD13_17695 ff2542f04fd7e23d1ccaee4eb018e304 472 Pfam PF02614 Glucuronate isomerase 22 466 2.6E-70 T 17-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 BJD13_17695 ff2542f04fd7e23d1ccaee4eb018e304 472 Hamap MF_00675 Uronate isomerase [uxaC]. 5 472 39.813 T 17-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 BJD13_17695 ff2542f04fd7e23d1ccaee4eb018e304 472 SUPERFAMILY SSF51556 8 471 6.46E-157 T 17-10-2018 IPR032466 Metal-dependent hydrolase BJD13_17695 ff2542f04fd7e23d1ccaee4eb018e304 472 Gene3D G3DSA:3.20.20.140 6 61 3.5E-17 T 17-10-2018 BJD13_17695 ff2542f04fd7e23d1ccaee4eb018e304 472 Gene3D G3DSA:3.20.20.140 121 472 4.8E-114 T 17-10-2018 BJD13_12305 3c5754aabc7c8cface847b116db5c312 213 Gene3D G3DSA:3.40.30.10 8 201 1.6E-51 T 17-10-2018 BJD13_12305 3c5754aabc7c8cface847b116db5c312 213 Pfam PF13409 Glutathione S-transferase, N-terminal domain 14 78 3.0E-10 T 17-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 BJD13_12305 3c5754aabc7c8cface847b116db5c312 213 SUPERFAMILY SSF52833 7 87 9.56E-17 T 17-10-2018 IPR036249 Thioredoxin-like superfamily BJD13_12305 3c5754aabc7c8cface847b116db5c312 213 Gene3D G3DSA:1.20.1050.10 87 197 1.6E-51 T 17-10-2018 BJD13_12305 3c5754aabc7c8cface847b116db5c312 213 SUPERFAMILY SSF47616 86 202 1.98E-10 T 17-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily BJD13_02875 509a6938ca9fba4b574b45b0131cdcaf 456 Gene3D G3DSA:3.50.50.60 146 268 1.5E-98 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_02875 509a6938ca9fba4b574b45b0131cdcaf 456 SUPERFAMILY SSF51905 7 373 1.3E-52 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_02875 509a6938ca9fba4b574b45b0131cdcaf 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 3.8E-69 T 17-10-2018 BJD13_02875 509a6938ca9fba4b574b45b0131cdcaf 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 137 146 3.8E-69 T 17-10-2018 BJD13_02875 509a6938ca9fba4b574b45b0131cdcaf 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 262 276 3.8E-69 T 17-10-2018 BJD13_02875 509a6938ca9fba4b574b45b0131cdcaf 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 3.8E-69 T 17-10-2018 BJD13_02875 509a6938ca9fba4b574b45b0131cdcaf 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 40 55 3.8E-69 T 17-10-2018 BJD13_02875 509a6938ca9fba4b574b45b0131cdcaf 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 3.8E-69 T 17-10-2018 BJD13_02875 509a6938ca9fba4b574b45b0131cdcaf 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 3.8E-69 T 17-10-2018 BJD13_02875 509a6938ca9fba4b574b45b0131cdcaf 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 3.8E-69 T 17-10-2018 BJD13_02875 509a6938ca9fba4b574b45b0131cdcaf 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 171 196 3.8E-69 T 17-10-2018 BJD13_02875 509a6938ca9fba4b574b45b0131cdcaf 456 PIRSF PIRSF000350 1 455 4.4E-75 T 17-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 BJD13_02875 509a6938ca9fba4b574b45b0131cdcaf 456 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 41 51 - T 17-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 BJD13_02875 509a6938ca9fba4b574b45b0131cdcaf 456 Gene3D G3DSA:3.30.390.30 345 456 5.7E-45 T 17-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 BJD13_02875 509a6938ca9fba4b574b45b0131cdcaf 456 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 134 152 8.8E-33 T 17-10-2018 BJD13_02875 509a6938ca9fba4b574b45b0131cdcaf 456 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 171 189 8.8E-33 T 17-10-2018 BJD13_02875 509a6938ca9fba4b574b45b0131cdcaf 456 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 277 8.8E-33 T 17-10-2018 BJD13_02875 509a6938ca9fba4b574b45b0131cdcaf 456 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 8.8E-33 T 17-10-2018 BJD13_02875 509a6938ca9fba4b574b45b0131cdcaf 456 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 8.8E-33 T 17-10-2018 BJD13_02875 509a6938ca9fba4b574b45b0131cdcaf 456 Gene3D G3DSA:3.50.50.60 7 328 1.5E-98 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_02875 509a6938ca9fba4b574b45b0131cdcaf 456 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 455 6.9E-33 T 17-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 BJD13_02875 509a6938ca9fba4b574b45b0131cdcaf 456 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 325 6.9E-57 T 17-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BJD13_02875 509a6938ca9fba4b574b45b0131cdcaf 456 SUPERFAMILY SSF55424 343 456 3.61E-34 T 17-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 BJD13_11185 e4aba84ee19615976f00c651b45e0ff7 119 SMART SM00530 62 116 0.0082 T 17-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BJD13_11185 e4aba84ee19615976f00c651b45e0ff7 119 SUPERFAMILY SSF47413 62 118 2.41E-7 T 17-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BJD13_11185 e4aba84ee19615976f00c651b45e0ff7 119 Gene3D G3DSA:1.10.260.40 54 119 1.7E-7 T 17-10-2018 BJD13_21625 8de249690b9dd30a303fd553a1ce8fdc 426 Gene3D G3DSA:2.30.40.10 33 397 1.2E-67 T 17-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BJD13_21625 8de249690b9dd30a303fd553a1ce8fdc 426 SUPERFAMILY SSF51556 208 367 2.2E-5 T 17-10-2018 IPR032466 Metal-dependent hydrolase BJD13_21625 8de249690b9dd30a303fd553a1ce8fdc 426 Pfam PF07969 Amidohydrolase family 341 398 3.0E-9 T 17-10-2018 IPR013108 Amidohydrolase 3 BJD13_21625 8de249690b9dd30a303fd553a1ce8fdc 426 SUPERFAMILY SSF51338 29 400 4.96E-20 T 17-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BJD13_21625 8de249690b9dd30a303fd553a1ce8fdc 426 Gene3D G3DSA:3.20.20.140 85 363 1.2E-67 T 17-10-2018 BJD13_10190 9f5cbd9a9d2e4df40e94a3511c2bbae4 458 Gene3D G3DSA:1.20.120.140 5 306 2.8E-120 T 17-10-2018 BJD13_10190 9f5cbd9a9d2e4df40e94a3511c2bbae4 458 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 428 6.6E-176 T 17-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 BJD13_10190 9f5cbd9a9d2e4df40e94a3511c2bbae4 458 SMART SM00962 100 296 8.1E-115 T 17-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BJD13_10190 9f5cbd9a9d2e4df40e94a3511c2bbae4 458 SUPERFAMILY SSF52540 42 353 7.22E-53 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_10190 9f5cbd9a9d2e4df40e94a3511c2bbae4 458 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 33.967 T 17-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 BJD13_10190 9f5cbd9a9d2e4df40e94a3511c2bbae4 458 SMART SM00963 1 86 1.5E-34 T 17-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BJD13_10190 9f5cbd9a9d2e4df40e94a3511c2bbae4 458 Pfam PF02978 Signal peptide binding domain 328 427 6.4E-33 T 17-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 BJD13_10190 9f5cbd9a9d2e4df40e94a3511c2bbae4 458 Gene3D G3DSA:3.40.50.300 90 285 2.8E-120 T 17-10-2018 BJD13_10190 9f5cbd9a9d2e4df40e94a3511c2bbae4 458 Pfam PF00448 SRP54-type protein, GTPase domain 101 295 4.1E-74 T 17-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BJD13_10190 9f5cbd9a9d2e4df40e94a3511c2bbae4 458 SMART SM00382 99 301 9.6E-11 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_10190 9f5cbd9a9d2e4df40e94a3511c2bbae4 458 SUPERFAMILY SSF47446 328 430 5.4E-37 T 17-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 BJD13_10190 9f5cbd9a9d2e4df40e94a3511c2bbae4 458 Gene3D G3DSA:1.10.260.30 328 455 2.2E-40 T 17-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 BJD13_10190 9f5cbd9a9d2e4df40e94a3511c2bbae4 458 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 9.8E-20 T 17-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BJD13_10190 9f5cbd9a9d2e4df40e94a3511c2bbae4 458 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 17-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BJD13_13680 52dc6a6602cf5985b9454769b0090f31 250 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 96 6.5E-8 T 17-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 BJD13_13680 52dc6a6602cf5985b9454769b0090f31 250 SUPERFAMILY SSF81624 2 119 5.65E-12 T 17-10-2018 IPR035937 MutM-like, N-terminal BJD13_13680 52dc6a6602cf5985b9454769b0090f31 250 SUPERFAMILY SSF46946 116 219 5.59E-18 T 17-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 BJD13_13680 52dc6a6602cf5985b9454769b0090f31 250 SMART SM01232 113 196 9.0E-11 T 17-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 BJD13_13680 52dc6a6602cf5985b9454769b0090f31 250 SMART SM00898 2 99 4.5E-7 T 17-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 BJD13_13680 52dc6a6602cf5985b9454769b0090f31 250 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 141 187 7.8E-11 T 17-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 BJD13_13680 52dc6a6602cf5985b9454769b0090f31 250 Gene3D G3DSA:3.20.190.10 2 111 2.0E-8 T 17-10-2018 IPR035937 MutM-like, N-terminal BJD13_13680 52dc6a6602cf5985b9454769b0090f31 250 Gene3D G3DSA:1.10.8.50 112 247 8.6E-29 T 17-10-2018 BJD13_23145 38a07581cf5316c185434fd23e4cf6ab 372 Gene3D G3DSA:3.40.1580.10 209 371 9.2E-6 T 17-10-2018 IPR037883 Knr4/Smi1-like domain superfamily BJD13_23145 38a07581cf5316c185434fd23e4cf6ab 372 Gene3D G3DSA:3.40.1580.10 21 179 4.5E-7 T 17-10-2018 IPR037883 Knr4/Smi1-like domain superfamily BJD13_23145 38a07581cf5316c185434fd23e4cf6ab 372 SUPERFAMILY SSF160631 218 366 1.01E-7 T 17-10-2018 BJD13_23145 38a07581cf5316c185434fd23e4cf6ab 372 Pfam PF14568 SMI1-KNR4 cell-wall 224 362 3.3E-6 T 17-10-2018 BJD13_23145 38a07581cf5316c185434fd23e4cf6ab 372 SMART SM00860 218 296 2.7E-5 T 17-10-2018 IPR018958 Knr4/Smi1-like domain BJD13_23145 38a07581cf5316c185434fd23e4cf6ab 372 SMART SM00860 29 173 1.1E-7 T 17-10-2018 IPR018958 Knr4/Smi1-like domain BJD13_23145 38a07581cf5316c185434fd23e4cf6ab 372 Pfam PF09346 SMI1 / KNR4 family (SUKH-1) 29 172 1.1E-10 T 17-10-2018 IPR018958 Knr4/Smi1-like domain BJD13_23145 38a07581cf5316c185434fd23e4cf6ab 372 SUPERFAMILY SSF160631 25 178 3.14E-9 T 17-10-2018 BJD13_19705 db8286fa3a2b1b7c31d4041ade2137dd 1046 SUPERFAMILY SSF82693 557 647 1.78E-5 T 17-10-2018 BJD13_19705 db8286fa3a2b1b7c31d4041ade2137dd 1046 SUPERFAMILY SSF82714 712 792 4.19E-16 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_19705 db8286fa3a2b1b7c31d4041ade2137dd 1046 Pfam PF00873 AcrB/AcrD/AcrF family 5 1014 2.9E-287 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_19705 db8286fa3a2b1b7c31d4041ade2137dd 1046 SUPERFAMILY SSF82866 290 489 3.27E-46 T 17-10-2018 BJD13_19705 db8286fa3a2b1b7c31d4041ade2137dd 1046 SUPERFAMILY SSF82714 182 265 2.35E-15 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_19705 db8286fa3a2b1b7c31d4041ade2137dd 1046 Gene3D G3DSA:3.30.70.1430 40 804 2.0E-279 T 17-10-2018 BJD13_19705 db8286fa3a2b1b7c31d4041ade2137dd 1046 Gene3D G3DSA:3.30.70.1430 559 656 2.0E-279 T 17-10-2018 BJD13_19705 db8286fa3a2b1b7c31d4041ade2137dd 1046 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 8.8E-61 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_19705 db8286fa3a2b1b7c31d4041ade2137dd 1046 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 8.8E-61 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_19705 db8286fa3a2b1b7c31d4041ade2137dd 1046 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 8.8E-61 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_19705 db8286fa3a2b1b7c31d4041ade2137dd 1046 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 8.8E-61 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_19705 db8286fa3a2b1b7c31d4041ade2137dd 1046 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 8.8E-61 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_19705 db8286fa3a2b1b7c31d4041ade2137dd 1046 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 8.8E-61 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_19705 db8286fa3a2b1b7c31d4041ade2137dd 1046 PRINTS PR00702 Acriflavin resistance protein family signature 544 561 8.8E-61 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_19705 db8286fa3a2b1b7c31d4041ade2137dd 1046 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 8.8E-61 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_19705 db8286fa3a2b1b7c31d4041ade2137dd 1046 Gene3D G3DSA:1.20.1640.10 10 504 2.0E-279 T 17-10-2018 BJD13_19705 db8286fa3a2b1b7c31d4041ade2137dd 1046 Gene3D G3DSA:3.30.70.1320 134 326 2.0E-279 T 17-10-2018 BJD13_19705 db8286fa3a2b1b7c31d4041ade2137dd 1046 SUPERFAMILY SSF82693 135 324 6.98E-21 T 17-10-2018 BJD13_19705 db8286fa3a2b1b7c31d4041ade2137dd 1046 SUPERFAMILY SSF82866 795 1014 7.19E-41 T 17-10-2018 BJD13_19705 db8286fa3a2b1b7c31d4041ade2137dd 1046 Gene3D G3DSA:3.30.2090.10 708 796 2.0E-279 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_19705 db8286fa3a2b1b7c31d4041ade2137dd 1046 Gene3D G3DSA:3.30.2090.10 178 269 2.0E-279 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_19705 db8286fa3a2b1b7c31d4041ade2137dd 1046 Gene3D G3DSA:3.30.70.1440 657 853 2.0E-279 T 17-10-2018 BJD13_19705 db8286fa3a2b1b7c31d4041ade2137dd 1046 Gene3D G3DSA:1.20.1640.10 505 1011 2.0E-279 T 17-10-2018 BJD13_19705 db8286fa3a2b1b7c31d4041ade2137dd 1046 SUPERFAMILY SSF82693 40 134 1.17E-21 T 17-10-2018 BJD13_01930 7ac1aa0bbb35a274bf347610f47c2784 228 SUPERFAMILY SSF51197 5 180 3.64E-6 T 17-10-2018 BJD13_01930 7ac1aa0bbb35a274bf347610f47c2784 228 Gene3D G3DSA:2.60.120.620 1 180 2.6E-43 T 17-10-2018 BJD13_01930 7ac1aa0bbb35a274bf347610f47c2784 228 Hamap MF_00657 PKHD-type hydroxylase YbiX [ybiX]. 1 228 46.921 T 17-10-2018 IPR023550 PKHD-type hydroxylase GO:0016706|GO:0055114 BJD13_01930 7ac1aa0bbb35a274bf347610f47c2784 228 SMART SM00702 1 179 8.3E-20 T 17-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 BJD13_01930 7ac1aa0bbb35a274bf347610f47c2784 228 Gene3D G3DSA:4.10.860.20 182 228 1.8E-21 T 17-10-2018 BJD13_01930 7ac1aa0bbb35a274bf347610f47c2784 228 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 84 178 5.8E-14 T 17-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 BJD13_19175 d99d6e00c48d4f3b7bec0304fb599c4e 220 Pfam PF11769 Protein of unknown function (DUF3313) 19 215 7.1E-46 T 17-10-2018 IPR021747 Protein of unknown function DUF3313 BJD13_05105 8abd2fc733f590d86f703f4aefdf9618 52 TIGRFAM TIGR03510 XapX: XapX domain 5 50 1.1E-14 T 17-10-2018 IPR020017 XapX domain BJD13_21820 e4c9df11299ae7bcae535a51a4ece83e 306 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 8 305 2.9E-123 T 17-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 BJD13_21820 e4c9df11299ae7bcae535a51a4ece83e 306 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 6 305 41.986 T 17-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 BJD13_21820 e4c9df11299ae7bcae535a51a4ece83e 306 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 10 296 1.6E-69 T 17-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 BJD13_21820 e4c9df11299ae7bcae535a51a4ece83e 306 PIRSF PIRSF026649 6 305 1.0E-91 T 17-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 BJD13_16280 09c3714fe2d8f452be59e04711e4dc5c 164 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 16 147 2.4E-22 T 17-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 BJD13_16280 09c3714fe2d8f452be59e04711e4dc5c 164 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 16 147 2.8E-30 T 17-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 BJD13_16280 09c3714fe2d8f452be59e04711e4dc5c 164 ProSitePatterns PS01269 Uncharacterized protein family UPF0025 signature. 107 131 - T 17-10-2018 IPR020935 Phosphodiesterase YfcE, conserved site BJD13_16280 09c3714fe2d8f452be59e04711e4dc5c 164 SUPERFAMILY SSF56300 15 149 5.37E-34 T 17-10-2018 BJD13_16280 09c3714fe2d8f452be59e04711e4dc5c 164 Gene3D G3DSA:3.60.21.10 13 150 6.4E-31 T 17-10-2018 IPR029052 Metallo-dependent phosphatase-like BJD13_18755 aad2360e25991cd38f42d9f013689378 275 Gene3D G3DSA:2.40.30.10 21 127 4.3E-16 T 17-10-2018 BJD13_18755 aad2360e25991cd38f42d9f013689378 275 Gene3D G3DSA:3.40.50.80 131 271 1.1E-31 T 17-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BJD13_18755 aad2360e25991cd38f42d9f013689378 275 SUPERFAMILY SSF63380 18 134 1.2E-19 T 17-10-2018 IPR017938 Riboflavin synthase-like beta-barrel BJD13_18755 aad2360e25991cd38f42d9f013689378 275 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 76 83 1.8E-6 T 17-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BJD13_18755 aad2360e25991cd38f42d9f013689378 275 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 179 190 1.8E-6 T 17-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BJD13_18755 aad2360e25991cd38f42d9f013689378 275 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 235 243 1.8E-6 T 17-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BJD13_18755 aad2360e25991cd38f42d9f013689378 275 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 140 159 1.8E-6 T 17-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BJD13_18755 aad2360e25991cd38f42d9f013689378 275 PRINTS PR00410 Phenol hydroxylase reductase family signature 56 68 2.7E-6 T 17-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 BJD13_18755 aad2360e25991cd38f42d9f013689378 275 PRINTS PR00410 Phenol hydroxylase reductase family signature 235 243 2.7E-6 T 17-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 BJD13_18755 aad2360e25991cd38f42d9f013689378 275 PRINTS PR00410 Phenol hydroxylase reductase family signature 123 132 2.7E-6 T 17-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 BJD13_18755 aad2360e25991cd38f42d9f013689378 275 PRINTS PR00410 Phenol hydroxylase reductase family signature 167 176 2.7E-6 T 17-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 BJD13_18755 aad2360e25991cd38f42d9f013689378 275 Pfam PF00175 Oxidoreductase NAD-binding domain 141 247 1.2E-17 T 17-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 BJD13_18755 aad2360e25991cd38f42d9f013689378 275 SUPERFAMILY SSF52343 132 269 3.01E-33 T 17-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BJD13_18755 aad2360e25991cd38f42d9f013689378 275 Pfam PF00970 Oxidoreductase FAD-binding domain 29 128 3.4E-11 T 17-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 BJD13_17485 9b9900c6fec718c92db3f145629ce05a 421 Pfam PF07690 Major Facilitator Superfamily 21 367 1.5E-53 T 17-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD13_17485 9b9900c6fec718c92db3f145629ce05a 421 SUPERFAMILY SSF103473 13 407 1.2E-69 T 17-10-2018 IPR036259 MFS transporter superfamily BJD13_17485 9b9900c6fec718c92db3f145629ce05a 421 PRINTS PR01035 Tetracycline resistance protein signature 89 113 9.2E-57 T 17-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BJD13_17485 9b9900c6fec718c92db3f145629ce05a 421 PRINTS PR01035 Tetracycline resistance protein signature 263 283 9.2E-57 T 17-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BJD13_17485 9b9900c6fec718c92db3f145629ce05a 421 PRINTS PR01035 Tetracycline resistance protein signature 27 43 9.2E-57 T 17-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BJD13_17485 9b9900c6fec718c92db3f145629ce05a 421 PRINTS PR01035 Tetracycline resistance protein signature 234 251 9.2E-57 T 17-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BJD13_17485 9b9900c6fec718c92db3f145629ce05a 421 PRINTS PR01035 Tetracycline resistance protein signature 291 312 9.2E-57 T 17-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BJD13_17485 9b9900c6fec718c92db3f145629ce05a 421 PRINTS PR01035 Tetracycline resistance protein signature 351 374 9.2E-57 T 17-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BJD13_17485 9b9900c6fec718c92db3f145629ce05a 421 PRINTS PR01035 Tetracycline resistance protein signature 116 137 9.2E-57 T 17-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BJD13_17485 9b9900c6fec718c92db3f145629ce05a 421 PRINTS PR01035 Tetracycline resistance protein signature 174 194 9.2E-57 T 17-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BJD13_17485 9b9900c6fec718c92db3f145629ce05a 421 PRINTS PR01035 Tetracycline resistance protein signature 146 168 9.2E-57 T 17-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BJD13_17485 9b9900c6fec718c92db3f145629ce05a 421 Gene3D G3DSA:1.20.1250.20 10 407 1.8E-74 T 17-10-2018 BJD13_07865 9ccff15829f7c61ed29251fb79bed5fd 652 SUPERFAMILY SSF55785 264 365 1.11E-24 T 17-10-2018 IPR035965 PAS domain superfamily BJD13_07865 9ccff15829f7c61ed29251fb79bed5fd 652 Pfam PF08447 PAS fold 154 239 2.9E-15 T 17-10-2018 IPR013655 PAS fold-3 GO:0005515 BJD13_07865 9ccff15829f7c61ed29251fb79bed5fd 652 Pfam PF08447 PAS fold 277 361 3.8E-14 T 17-10-2018 IPR013655 PAS fold-3 GO:0005515 BJD13_07865 9ccff15829f7c61ed29251fb79bed5fd 652 SUPERFAMILY SSF55785 20 121 5.93E-24 T 17-10-2018 IPR035965 PAS domain superfamily BJD13_07865 9ccff15829f7c61ed29251fb79bed5fd 652 Gene3D G3DSA:1.10.287.950 360 625 1.4E-59 T 17-10-2018 BJD13_07865 9ccff15829f7c61ed29251fb79bed5fd 652 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 441 592 1.1E-41 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD13_07865 9ccff15829f7c61ed29251fb79bed5fd 652 Pfam PF08448 PAS fold 21 126 3.7E-11 T 17-10-2018 IPR013656 PAS fold-4 BJD13_07865 9ccff15829f7c61ed29251fb79bed5fd 652 Gene3D G3DSA:3.30.450.20 265 359 4.0E-17 T 17-10-2018 BJD13_07865 9ccff15829f7c61ed29251fb79bed5fd 652 Gene3D G3DSA:3.30.450.20 8 128 2.5E-21 T 17-10-2018 BJD13_07865 9ccff15829f7c61ed29251fb79bed5fd 652 Gene3D G3DSA:3.30.450.20 129 258 5.4E-21 T 17-10-2018 BJD13_07865 9ccff15829f7c61ed29251fb79bed5fd 652 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 508 537 5.2E-38 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD13_07865 9ccff15829f7c61ed29251fb79bed5fd 652 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 556 585 5.2E-38 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD13_07865 9ccff15829f7c61ed29251fb79bed5fd 652 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 479 506 5.2E-38 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD13_07865 9ccff15829f7c61ed29251fb79bed5fd 652 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 402 431 5.2E-38 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD13_07865 9ccff15829f7c61ed29251fb79bed5fd 652 SMART SM00086 326 368 1.5E-6 T 17-10-2018 IPR001610 PAC motif BJD13_07865 9ccff15829f7c61ed29251fb79bed5fd 652 SMART SM00086 82 124 1.5 T 17-10-2018 IPR001610 PAC motif BJD13_07865 9ccff15829f7c61ed29251fb79bed5fd 652 SMART SM00086 204 246 5.8E-5 T 17-10-2018 IPR001610 PAC motif BJD13_07865 9ccff15829f7c61ed29251fb79bed5fd 652 SUPERFAMILY SSF58104 374 625 1.1E-55 T 17-10-2018 BJD13_07865 9ccff15829f7c61ed29251fb79bed5fd 652 SMART SM00091 129 199 0.56 T 17-10-2018 IPR000014 PAS domain BJD13_07865 9ccff15829f7c61ed29251fb79bed5fd 652 SMART SM00091 9 76 0.64 T 17-10-2018 IPR000014 PAS domain BJD13_07865 9ccff15829f7c61ed29251fb79bed5fd 652 SMART SM00091 253 321 0.72 T 17-10-2018 IPR000014 PAS domain BJD13_07865 9ccff15829f7c61ed29251fb79bed5fd 652 SUPERFAMILY SSF55785 142 243 6.81E-24 T 17-10-2018 IPR035965 PAS domain superfamily BJD13_07865 9ccff15829f7c61ed29251fb79bed5fd 652 SMART SM00283 381 628 1.3E-61 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD13_07865 9ccff15829f7c61ed29251fb79bed5fd 652 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 21 127 1.0E-14 T 17-10-2018 IPR000014 PAS domain BJD13_07865 9ccff15829f7c61ed29251fb79bed5fd 652 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 143 245 1.3E-10 T 17-10-2018 IPR000014 PAS domain BJD13_07865 9ccff15829f7c61ed29251fb79bed5fd 652 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 265 374 4.4E-14 T 17-10-2018 IPR000014 PAS domain BJD13_04195 6b9008d662243efa53b7a6195f9cb110 292 SUPERFAMILY SSF54631 65 201 7.33E-31 T 17-10-2018 BJD13_04195 6b9008d662243efa53b7a6195f9cb110 292 Pfam PF03471 Transporter associated domain 209 283 3.8E-22 T 17-10-2018 IPR005170 Transporter-associated domain BJD13_04195 6b9008d662243efa53b7a6195f9cb110 292 SMART SM00116 141 189 1.9 T 17-10-2018 IPR000644 CBS domain BJD13_04195 6b9008d662243efa53b7a6195f9cb110 292 SMART SM00116 78 127 3.5 T 17-10-2018 IPR000644 CBS domain BJD13_04195 6b9008d662243efa53b7a6195f9cb110 292 SMART SM01091 207 285 1.6E-28 T 17-10-2018 IPR005170 Transporter-associated domain BJD13_04195 6b9008d662243efa53b7a6195f9cb110 292 SUPERFAMILY SSF56176 206 290 3.54E-24 T 17-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 BJD13_04195 6b9008d662243efa53b7a6195f9cb110 292 Gene3D G3DSA:3.10.580.10 52 195 2.7E-50 T 17-10-2018 BJD13_04195 6b9008d662243efa53b7a6195f9cb110 292 Pfam PF00571 CBS domain 137 189 5.0E-5 T 17-10-2018 IPR000644 CBS domain BJD13_04195 6b9008d662243efa53b7a6195f9cb110 292 Pfam PF00571 CBS domain 69 124 2.8E-5 T 17-10-2018 IPR000644 CBS domain BJD13_04195 6b9008d662243efa53b7a6195f9cb110 292 Gene3D G3DSA:3.30.465.10 196 284 1.1E-28 T 17-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 BJD13_10225 243bde13bd69ce578efa989e1bfd1ce0 387 SUPERFAMILY SSF55874 211 380 4.32E-34 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_10225 243bde13bd69ce578efa989e1bfd1ce0 387 SUPERFAMILY SSF47384 150 218 6.47E-8 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD13_10225 243bde13bd69ce578efa989e1bfd1ce0 387 PRINTS PR00344 Bacterial sensor protein C-terminal signature 366 379 1.0E-11 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_10225 243bde13bd69ce578efa989e1bfd1ce0 387 PRINTS PR00344 Bacterial sensor protein C-terminal signature 329 339 1.0E-11 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_10225 243bde13bd69ce578efa989e1bfd1ce0 387 PRINTS PR00344 Bacterial sensor protein C-terminal signature 311 325 1.0E-11 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_10225 243bde13bd69ce578efa989e1bfd1ce0 387 PRINTS PR00344 Bacterial sensor protein C-terminal signature 342 360 1.0E-11 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_10225 243bde13bd69ce578efa989e1bfd1ce0 387 Gene3D G3DSA:1.10.287.130 150 219 3.4E-15 T 17-10-2018 BJD13_10225 243bde13bd69ce578efa989e1bfd1ce0 387 SMART SM00091 18 85 1.4E-4 T 17-10-2018 IPR000014 PAS domain BJD13_10225 243bde13bd69ce578efa989e1bfd1ce0 387 Pfam PF13426 PAS domain 32 132 2.2E-8 T 17-10-2018 IPR000014 PAS domain BJD13_10225 243bde13bd69ce578efa989e1bfd1ce0 387 SMART SM00388 155 221 6.3E-6 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_10225 243bde13bd69ce578efa989e1bfd1ce0 387 Gene3D G3DSA:3.30.450.20 17 149 1.6E-23 T 17-10-2018 BJD13_10225 243bde13bd69ce578efa989e1bfd1ce0 387 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 263 380 3.9E-12 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_10225 243bde13bd69ce578efa989e1bfd1ce0 387 SUPERFAMILY SSF55785 31 142 1.59E-21 T 17-10-2018 IPR035965 PAS domain superfamily BJD13_10225 243bde13bd69ce578efa989e1bfd1ce0 387 Gene3D G3DSA:3.30.565.10 224 387 9.9E-36 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_10225 243bde13bd69ce578efa989e1bfd1ce0 387 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 28 139 5.0E-18 T 17-10-2018 IPR000014 PAS domain BJD13_10225 243bde13bd69ce578efa989e1bfd1ce0 387 SMART SM00387 262 382 8.8E-20 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 SUPERFAMILY SSF101967 1294 1446 4.97E-31 T 17-10-2018 BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 SUPERFAMILY SSF101967 400 526 1.05E-29 T 17-10-2018 BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 Gene3D G3DSA:2.150.10.10 536 608 1.1E-6 T 17-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 Gene3D G3DSA:2.150.10.10 1723 1849 2.0E-20 T 17-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 Gene3D G3DSA:3.30.1300.30 2252 2357 4.0E-15 T 17-10-2018 BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 Gene3D G3DSA:2.150.10.10 1195 1281 1.8E-7 T 17-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 SUPERFAMILY SSF101967 1133 1259 3.2E-16 T 17-10-2018 BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 Gene3D G3DSA:2.150.10.10 394 534 2.1E-39 T 17-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 Gene3D G3DSA:2.150.10.10 1651 1722 1.4E-8 T 17-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 Gene3D G3DSA:2.150.10.10 1449 1568 1.5E-13 T 17-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 Gene3D G3DSA:2.150.10.10 53 214 5.7E-35 T 17-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 Gene3D G3DSA:2.150.10.10 222 309 1.0E-9 T 17-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 SUPERFAMILY SSF101967 2087 2245 6.41E-27 T 17-10-2018 BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 SUPERFAMILY SSF101967 1457 1580 5.95E-15 T 17-10-2018 BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 23 1.7E-8 T 17-10-2018 IPR024973 ESPR domain BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 SUPERFAMILY SSF101967 226 305 2.88E-9 T 17-10-2018 BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 Gene3D G3DSA:1.20.5.170 1975 2062 4.7E-15 T 17-10-2018 BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 SUPERFAMILY SSF101967 629 745 6.41E-16 T 17-10-2018 BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 SUPERFAMILY SSF101967 64 208 4.32E-28 T 17-10-2018 BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 Gene3D G3DSA:2.150.10.10 310 388 5.6E-6 T 17-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 Gene3D G3DSA:2.150.10.10 825 938 7.3E-21 T 17-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 SUPERFAMILY SSF101967 543 655 5.36E-18 T 17-10-2018 BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 SUPERFAMILY SSF101967 1657 1830 7.59E-29 T 17-10-2018 BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 502 540 1.1E-8 T 17-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1423 1452 3.2E-8 T 17-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1092 1132 4.5E-8 T 17-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1972 2003 5.9E-8 T 17-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 184 211 1.1E-8 T 17-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 2224 2260 5.8E-7 T 17-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1808 1847 1.2E-7 T 17-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 Pfam PF05658 Head domain of trimeric autotransporter adhesin 1924 1949 1.7E-4 T 17-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 Pfam PF05658 Head domain of trimeric autotransporter adhesin 1303 1329 1.1E-5 T 17-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 Pfam PF05658 Head domain of trimeric autotransporter adhesin 1893 1919 1.2E-6 T 17-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 Pfam PF05658 Head domain of trimeric autotransporter adhesin 430 456 1.7E-5 T 17-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 Pfam PF05658 Head domain of trimeric autotransporter adhesin 2136 2162 3.2E-4 T 17-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 Pfam PF05658 Head domain of trimeric autotransporter adhesin 136 161 3.7E-4 T 17-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 Pfam PF05658 Head domain of trimeric autotransporter adhesin 853 879 1.7E-4 T 17-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 Pfam PF05658 Head domain of trimeric autotransporter adhesin 867 893 5.7E-7 T 17-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 Pfam PF05658 Head domain of trimeric autotransporter adhesin 458 484 3.5E-6 T 17-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 Pfam PF05658 Head domain of trimeric autotransporter adhesin 1034 1060 1.9E-6 T 17-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 Pfam PF05658 Head domain of trimeric autotransporter adhesin 713 739 4.8E-5 T 17-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 Pfam PF05658 Head domain of trimeric autotransporter adhesin 1659 1685 1.8E-4 T 17-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 Pfam PF05658 Head domain of trimeric autotransporter adhesin 992 1018 4.4E-4 T 17-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 Pfam PF05658 Head domain of trimeric autotransporter adhesin 105 131 5.2E-7 T 17-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 Pfam PF05658 Head domain of trimeric autotransporter adhesin 1247 1273 5.3E-5 T 17-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 Pfam PF05658 Head domain of trimeric autotransporter adhesin 1048 1074 4.0E-6 T 17-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 Pfam PF05658 Head domain of trimeric autotransporter adhesin 1365 1391 3.3E-6 T 17-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 SUPERFAMILY SSF54523 2235 2357 1.05E-12 T 17-10-2018 BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 Gene3D G3DSA:2.150.10.10 1594 1650 5.0E-9 T 17-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 Gene3D G3DSA:2.150.10.10 1131 1194 2.4E-6 T 17-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 Gene3D G3DSA:2.150.10.10 769 824 3.8E-8 T 17-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 Gene3D G3DSA:2.150.10.10 612 713 6.5E-14 T 17-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 Gene3D G3DSA:2.150.10.10 714 768 1.2E-8 T 17-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 Gene3D G3DSA:2.150.10.10 1850 1974 6.7E-21 T 17-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 SUPERFAMILY SSF101967 930 1114 3.86E-40 T 17-10-2018 BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 SUPERFAMILY SSF101967 1845 1996 8.63E-25 T 17-10-2018 BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 Gene3D G3DSA:2.150.10.10 1282 1448 1.1E-39 T 17-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 Gene3D G3DSA:2.150.10.10 2063 2247 4.6E-29 T 17-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 Gene3D G3DSA:2.150.10.10 951 1117 6.2E-41 T 17-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 SUPERFAMILY SSF101967 806 934 4.45E-21 T 17-10-2018 BJD13_21415 1e0ab819b2d304596f1da7e6f395148d 2357 SUPERFAMILY SSF101967 309 386 1.57E-5 T 17-10-2018 BJD13_22955 51c68615bb17af4a1721cc149cf295c8 589 Pfam PF04183 IucA / IucC family 150 379 1.4E-43 T 17-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 BJD13_22955 51c68615bb17af4a1721cc149cf295c8 589 Gene3D G3DSA:1.10.510.40 371 548 5.2E-22 T 17-10-2018 BJD13_22955 51c68615bb17af4a1721cc149cf295c8 589 Gene3D G3DSA:3.10.450.440 36 98 8.9E-8 T 17-10-2018 BJD13_22955 51c68615bb17af4a1721cc149cf295c8 589 Gene3D G3DSA:1.10.150.640 16 136 8.9E-8 T 17-10-2018 BJD13_22955 51c68615bb17af4a1721cc149cf295c8 589 Pfam PF06276 Ferric iron reductase FhuF-like transporter 409 568 1.0E-34 T 17-10-2018 IPR022770 Ferric iron reductase FhuF domain BJD13_14365 ed721fe9d982868b084459fce6c3f455 296 SUPERFAMILY SSF55811 112 292 8.26E-41 T 17-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BJD13_14365 ed721fe9d982868b084459fce6c3f455 296 ProSitePatterns PS00893 Nudix box signature. 193 214 - T 17-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 BJD13_14365 ed721fe9d982868b084459fce6c3f455 296 Pfam PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain 39 125 1.7E-4 T 17-10-2018 IPR015375 NADH pyrophosphatase-like, N-terminal GO:0016787 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 BJD13_14365 ed721fe9d982868b084459fce6c3f455 296 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 128 158 1.6E-8 T 17-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 BJD13_14365 ed721fe9d982868b084459fce6c3f455 296 Pfam PF00293 NUDIX domain 164 267 1.0E-15 T 17-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 BJD13_14365 ed721fe9d982868b084459fce6c3f455 296 Gene3D G3DSA:3.90.79.10 160 295 3.9E-35 T 17-10-2018 BJD13_14365 ed721fe9d982868b084459fce6c3f455 296 Gene3D G3DSA:3.90.79.20 43 159 2.9E-11 T 17-10-2018 BJD13_15595 2e701b01a0d719ff7efa646707456781 323 Gene3D G3DSA:3.20.20.100 3 321 8.9E-101 T 17-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BJD13_15595 2e701b01a0d719ff7efa646707456781 323 SUPERFAMILY SSF51430 4 315 1.96E-92 T 17-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BJD13_15595 2e701b01a0d719ff7efa646707456781 323 Pfam PF00248 Aldo/keto reductase family 16 314 1.1E-68 T 17-10-2018 IPR023210 NADP-dependent oxidoreductase domain BJD13_11445 45d1d7032fc394879633a1381e4c583e 255 SUPERFAMILY SSF56281 1 254 2.23E-66 T 17-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BJD13_11445 45d1d7032fc394879633a1381e4c583e 255 SMART SM00849 11 165 1.1E-33 T 17-10-2018 IPR001279 Metallo-beta-lactamase BJD13_11445 45d1d7032fc394879633a1381e4c583e 255 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 1 253 43.385 T 17-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 BJD13_11445 45d1d7032fc394879633a1381e4c583e 255 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 253 8.8E-102 T 17-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 BJD13_11445 45d1d7032fc394879633a1381e4c583e 255 Gene3D G3DSA:3.60.15.10 1 253 1.9E-87 T 17-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BJD13_11445 45d1d7032fc394879633a1381e4c583e 255 Pfam PF00753 Metallo-beta-lactamase superfamily 16 165 2.9E-18 T 17-10-2018 IPR001279 Metallo-beta-lactamase BJD13_11445 45d1d7032fc394879633a1381e4c583e 255 PIRSF PIRSF005457 1 253 3.4E-92 T 17-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 BJD13_11445 45d1d7032fc394879633a1381e4c583e 255 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 166 253 2.0E-26 T 17-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 BJD13_09710 b2abd9380614b6c0f8ca62a43f62027d 260 Pfam PF06966 Protein of unknown function (DUF1295) 21 250 4.7E-78 T 17-10-2018 IPR010721 Protein of unknown function DUF1295 BJD13_09710 b2abd9380614b6c0f8ca62a43f62027d 260 Gene3D G3DSA:1.20.120.1630 73 256 4.9E-15 T 17-10-2018 BJD13_20905 ea79273374f025aee66639840c2c5c70 515 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 384 509 3.6E-44 T 17-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD13_20905 ea79273374f025aee66639840c2c5c70 515 SUPERFAMILY SSF50615 12 96 1.59E-25 T 17-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BJD13_20905 ea79273374f025aee66639840c2c5c70 515 Gene3D G3DSA:2.40.30.20 3 95 1.2E-29 T 17-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BJD13_20905 ea79273374f025aee66639840c2c5c70 515 Gene3D G3DSA:3.40.50.300 96 384 1.8E-130 T 17-10-2018 BJD13_20905 ea79273374f025aee66639840c2c5c70 515 SUPERFAMILY SSF47917 385 512 7.06E-46 T 17-10-2018 BJD13_20905 ea79273374f025aee66639840c2c5c70 515 SUPERFAMILY SSF52540 98 383 1.89E-95 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_20905 ea79273374f025aee66639840c2c5c70 515 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 151 377 1.7E-72 T 17-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BJD13_20905 ea79273374f025aee66639840c2c5c70 515 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 5 512 4.2E-247 T 17-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD13_20905 ea79273374f025aee66639840c2c5c70 515 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 368 377 - T 17-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BJD13_20905 ea79273374f025aee66639840c2c5c70 515 Gene3D G3DSA:1.20.150.20 385 515 2.1E-47 T 17-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD13_20905 ea79273374f025aee66639840c2c5c70 515 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 3 514 49.814 T 17-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD13_20905 ea79273374f025aee66639840c2c5c70 515 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 94 2.3E-11 T 17-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BJD13_04220 573dd2013d12807086ed554c87069908 484 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 37 475 2.0E-147 T 17-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 BJD13_04220 573dd2013d12807086ed554c87069908 484 Pfam PF04055 Radical SAM superfamily 184 363 1.9E-27 T 17-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BJD13_04220 573dd2013d12807086ed554c87069908 484 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 37 477 8.4E-180 T 17-10-2018 BJD13_04220 573dd2013d12807086ed554c87069908 484 Pfam PF00919 Uncharacterized protein family UPF0004 37 137 1.0E-29 T 17-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 BJD13_04220 573dd2013d12807086ed554c87069908 484 Gene3D G3DSA:3.80.30.20 178 418 3.0E-81 T 17-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe BJD13_04220 573dd2013d12807086ed554c87069908 484 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 36 478 73.307 T 17-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 BJD13_04220 573dd2013d12807086ed554c87069908 484 Pfam PF01938 TRAM domain 416 477 1.0E-19 T 17-10-2018 IPR002792 TRAM domain BJD13_04220 573dd2013d12807086ed554c87069908 484 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 184 204 - T 17-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 BJD13_04220 573dd2013d12807086ed554c87069908 484 Gene3D G3DSA:3.40.50.12160 37 170 4.9E-34 T 17-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily BJD13_04220 573dd2013d12807086ed554c87069908 484 SMART SM00729 180 405 4.0E-58 T 17-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 BJD13_04220 573dd2013d12807086ed554c87069908 484 SUPERFAMILY SSF102114 162 409 4.58E-59 T 17-10-2018 BJD13_12930 947305596de3a986ac8b9ed80c80c3b1 886 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 769 874 3.2E-18 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_12930 947305596de3a986ac8b9ed80c80c3b1 886 Gene3D G3DSA:1.10.287.130 646 719 2.1E-16 T 17-10-2018 BJD13_12930 947305596de3a986ac8b9ed80c80c3b1 886 Gene3D G3DSA:3.30.565.10 729 876 4.1E-33 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_12930 947305596de3a986ac8b9ed80c80c3b1 886 Pfam PF13493 Domain of unknown function (DUF4118) 397 498 8.6E-23 T 17-10-2018 IPR025201 Sensor protein KdpD, transmembrane domain BJD13_12930 947305596de3a986ac8b9ed80c80c3b1 886 SUPERFAMILY SSF47384 648 719 9.02E-14 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD13_12930 947305596de3a986ac8b9ed80c80c3b1 886 Gene3D G3DSA:3.40.50.620 235 371 3.9E-11 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD13_12930 947305596de3a986ac8b9ed80c80c3b1 886 SMART SM00387 764 876 8.9E-31 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_12930 947305596de3a986ac8b9ed80c80c3b1 886 Gene3D G3DSA:3.40.50.300 18 228 2.7E-97 T 17-10-2018 BJD13_12930 947305596de3a986ac8b9ed80c80c3b1 886 Pfam PF00512 His Kinase A (phospho-acceptor) domain 653 719 1.1E-11 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_12930 947305596de3a986ac8b9ed80c80c3b1 886 PRINTS PR00344 Bacterial sensor protein C-terminal signature 801 815 3.2E-15 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_12930 947305596de3a986ac8b9ed80c80c3b1 886 PRINTS PR00344 Bacterial sensor protein C-terminal signature 819 829 3.2E-15 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_12930 947305596de3a986ac8b9ed80c80c3b1 886 PRINTS PR00344 Bacterial sensor protein C-terminal signature 860 873 3.2E-15 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_12930 947305596de3a986ac8b9ed80c80c3b1 886 PRINTS PR00344 Bacterial sensor protein C-terminal signature 835 853 3.2E-15 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_12930 947305596de3a986ac8b9ed80c80c3b1 886 SUPERFAMILY SSF52540 21 223 1.59E-6 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_12930 947305596de3a986ac8b9ed80c80c3b1 886 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 21 229 2.2E-93 T 17-10-2018 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 BJD13_12930 947305596de3a986ac8b9ed80c80c3b1 886 SUPERFAMILY SSF52402 250 362 8.37E-12 T 17-10-2018 BJD13_12930 947305596de3a986ac8b9ed80c80c3b1 886 SMART SM00388 652 720 6.7E-15 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_12930 947305596de3a986ac8b9ed80c80c3b1 886 Gene3D G3DSA:1.20.120.620 391 496 3.3E-23 T 17-10-2018 IPR038318 KdpD, transmembrane domain superfamily BJD13_12930 947305596de3a986ac8b9ed80c80c3b1 886 SUPERFAMILY SSF55874 710 877 2.36E-37 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_12930 947305596de3a986ac8b9ed80c80c3b1 886 Pfam PF00582 Universal stress protein family 249 361 8.4E-6 T 17-10-2018 IPR006016 UspA BJD13_12930 947305596de3a986ac8b9ed80c80c3b1 886 Gene3D G3DSA:3.30.450.40 505 643 2.9E-22 T 17-10-2018 IPR029016 GAF-like domain superfamily BJD13_06915 4b174a914dad5b5448cb0c88e3563b17 793 Gene3D G3DSA:1.10.287.950 440 739 1.3E-85 T 17-10-2018 BJD13_06915 4b174a914dad5b5448cb0c88e3563b17 793 SMART SM00304 437 489 13.0 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_06915 4b174a914dad5b5448cb0c88e3563b17 793 SMART SM00304 213 265 2.0E-9 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_06915 4b174a914dad5b5448cb0c88e3563b17 793 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 183 1.2E-14 T 17-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain BJD13_06915 4b174a914dad5b5448cb0c88e3563b17 793 SMART SM00283 490 737 1.0E-92 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD13_06915 4b174a914dad5b5448cb0c88e3563b17 793 Pfam PF00672 HAMP domain 213 261 3.2E-8 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_06915 4b174a914dad5b5448cb0c88e3563b17 793 Gene3D G3DSA:1.20.1480.50 171 271 3.3E-14 T 17-10-2018 BJD13_06915 4b174a914dad5b5448cb0c88e3563b17 793 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 550 704 5.5E-54 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD13_06915 4b174a914dad5b5448cb0c88e3563b17 793 SUPERFAMILY SSF158472 213 264 1.31E-8 T 17-10-2018 BJD13_06915 4b174a914dad5b5448cb0c88e3563b17 793 SUPERFAMILY SSF58104 457 738 5.36E-72 T 17-10-2018 BJD13_06915 4b174a914dad5b5448cb0c88e3563b17 793 SUPERFAMILY SSF55785 259 385 2.09E-6 T 17-10-2018 IPR035965 PAS domain superfamily BJD13_06915 4b174a914dad5b5448cb0c88e3563b17 793 Gene3D G3DSA:3.30.450.20 272 393 2.6E-21 T 17-10-2018 BJD13_09170 53af8f1892e40c707b5ad9c48d33e9d6 184 Gene3D G3DSA:3.40.50.360 5 182 1.0E-52 T 17-10-2018 IPR029039 Flavoprotein-like superfamily BJD13_09170 53af8f1892e40c707b5ad9c48d33e9d6 184 SUPERFAMILY SSF52218 4 175 6.37E-48 T 17-10-2018 IPR029039 Flavoprotein-like superfamily BJD13_09170 53af8f1892e40c707b5ad9c48d33e9d6 184 Pfam PF03358 NADPH-dependent FMN reductase 5 148 1.4E-38 T 17-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 BJD13_07585 c101b29452f9900c242a0d29f0047edf 188 Gene3D G3DSA:1.10.10.60 125 183 4.4E-21 T 17-10-2018 BJD13_07585 c101b29452f9900c242a0d29f0047edf 188 Gene3D G3DSA:3.40.50.2300 7 124 1.3E-25 T 17-10-2018 BJD13_07585 c101b29452f9900c242a0d29f0047edf 188 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 147 164 1.8E-9 T 17-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD13_07585 c101b29452f9900c242a0d29f0047edf 188 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 164 184 1.8E-9 T 17-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD13_07585 c101b29452f9900c242a0d29f0047edf 188 SUPERFAMILY SSF52172 10 121 4.41E-28 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_07585 c101b29452f9900c242a0d29f0047edf 188 Pfam PF02954 Bacterial regulatory protein, Fis family 147 180 1.1E-12 T 17-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD13_07585 c101b29452f9900c242a0d29f0047edf 188 SMART SM00448 7 118 1.1E-18 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_07585 c101b29452f9900c242a0d29f0047edf 188 Pfam PF00072 Response regulator receiver domain 10 117 1.2E-20 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_07585 c101b29452f9900c242a0d29f0047edf 188 SUPERFAMILY SSF46689 90 180 3.49E-16 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_15520 46242431ecb8561c2f3ca426f8074f5b 295 PRINTS PR00111 Alpha/beta hydrolase fold signature 118 131 1.3E-5 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD13_15520 46242431ecb8561c2f3ca426f8074f5b 295 PRINTS PR00111 Alpha/beta hydrolase fold signature 57 72 1.3E-5 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD13_15520 46242431ecb8561c2f3ca426f8074f5b 295 Pfam PF00561 alpha/beta hydrolase fold 32 146 1.4E-19 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD13_15520 46242431ecb8561c2f3ca426f8074f5b 295 PRINTS PR00412 Epoxide hydrolase signature 264 286 2.0E-6 T 17-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 BJD13_15520 46242431ecb8561c2f3ca426f8074f5b 295 PRINTS PR00412 Epoxide hydrolase signature 118 131 2.0E-6 T 17-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 BJD13_15520 46242431ecb8561c2f3ca426f8074f5b 295 PRINTS PR00412 Epoxide hydrolase signature 38 56 2.0E-6 T 17-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 BJD13_15520 46242431ecb8561c2f3ca426f8074f5b 295 SUPERFAMILY SSF53474 8 289 6.31E-66 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_15520 46242431ecb8561c2f3ca426f8074f5b 295 Gene3D G3DSA:3.40.50.1820 3 289 9.9E-53 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_05890 0e3fdb5426cf8f86593fe12aa365c2de 461 Gene3D G3DSA:2.60.200.20 10 107 2.0E-17 T 17-10-2018 BJD13_05890 0e3fdb5426cf8f86593fe12aa365c2de 461 TIGRFAM TIGR03354 VI_FHA: type VI secretion system FHA domain protein 8 447 4.2E-117 T 17-10-2018 IPR017735 Type VI secretion system, FHA domain-containing protein BJD13_05890 0e3fdb5426cf8f86593fe12aa365c2de 461 SMART SM00240 32 81 3.5E-6 T 17-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 BJD13_05890 0e3fdb5426cf8f86593fe12aa365c2de 461 SUPERFAMILY SSF49879 25 104 3.06E-20 T 17-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 BJD13_05890 0e3fdb5426cf8f86593fe12aa365c2de 461 Pfam PF00498 FHA domain 34 97 2.7E-14 T 17-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 BJD13_03580 41a4913c99f02b7b3bf3d15453cb857d 380 Gene3D G3DSA:3.40.50.2000 1 185 2.8E-24 T 17-10-2018 BJD13_03580 41a4913c99f02b7b3bf3d15453cb857d 380 Pfam PF00534 Glycosyl transferases group 1 191 335 1.8E-23 T 17-10-2018 IPR001296 Glycosyl transferase, family 1 BJD13_03580 41a4913c99f02b7b3bf3d15453cb857d 380 SUPERFAMILY SSF53756 2 370 6.8E-59 T 17-10-2018 BJD13_03580 41a4913c99f02b7b3bf3d15453cb857d 380 Gene3D G3DSA:3.40.50.2000 186 346 3.5E-29 T 17-10-2018 BJD13_03580 41a4913c99f02b7b3bf3d15453cb857d 380 Pfam PF13439 Glycosyltransferase Family 4 14 179 1.4E-17 T 17-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 BJD13_09010 d233cdf03b35bf17b1b8541b6ad4cc1b 373 Pfam PF02153 Prephenate dehydrogenase 46 252 5.9E-26 T 17-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 BJD13_09010 d233cdf03b35bf17b1b8541b6ad4cc1b 373 Gene3D G3DSA:3.40.50.720 2 159 8.1E-29 T 17-10-2018 BJD13_09010 d233cdf03b35bf17b1b8541b6ad4cc1b 373 Pfam PF01842 ACT domain 297 345 3.2E-7 T 17-10-2018 IPR002912 ACT domain BJD13_09010 d233cdf03b35bf17b1b8541b6ad4cc1b 373 SUPERFAMILY SSF51735 7 151 3.17E-23 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_09010 d233cdf03b35bf17b1b8541b6ad4cc1b 373 SUPERFAMILY SSF55021 296 362 9.51E-10 T 17-10-2018 BJD13_09010 d233cdf03b35bf17b1b8541b6ad4cc1b 373 Gene3D G3DSA:1.10.3660.10 161 277 3.5E-13 T 17-10-2018 BJD13_09010 d233cdf03b35bf17b1b8541b6ad4cc1b 373 Gene3D G3DSA:3.30.70.260 296 364 5.5E-8 T 17-10-2018 BJD13_09010 d233cdf03b35bf17b1b8541b6ad4cc1b 373 SUPERFAMILY SSF48179 154 254 4.08E-20 T 17-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BJD13_16405 7555a85de571b86ffa941a391661dbb8 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 203 1.8E-16 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_16405 7555a85de571b86ffa941a391661dbb8 210 SMART SM00448 4 116 3.1E-32 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_16405 7555a85de571b86ffa941a391661dbb8 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 3.5E-11 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_16405 7555a85de571b86ffa941a391661dbb8 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 3.5E-11 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_16405 7555a85de571b86ffa941a391661dbb8 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 3.5E-11 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_16405 7555a85de571b86ffa941a391661dbb8 210 Pfam PF00072 Response regulator receiver domain 6 117 1.5E-29 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_16405 7555a85de571b86ffa941a391661dbb8 210 SMART SM00421 147 204 1.7E-19 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_16405 7555a85de571b86ffa941a391661dbb8 210 SUPERFAMILY SSF52172 1 178 1.24E-34 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_16405 7555a85de571b86ffa941a391661dbb8 210 Gene3D G3DSA:3.40.50.12740 5 210 1.9E-61 T 17-10-2018 BJD13_07745 1ee6e45fb948877b0a77e033045943cf 323 Pfam PF03466 LysR substrate binding domain 101 309 1.4E-32 T 17-10-2018 IPR005119 LysR, substrate-binding BJD13_07745 1ee6e45fb948877b0a77e033045943cf 323 SUPERFAMILY SSF46785 11 124 6.09E-22 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_07745 1ee6e45fb948877b0a77e033045943cf 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 52 1.3E-5 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_07745 1ee6e45fb948877b0a77e033045943cf 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 52 63 1.3E-5 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_07745 1ee6e45fb948877b0a77e033045943cf 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 42 1.3E-5 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_07745 1ee6e45fb948877b0a77e033045943cf 323 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 17 74 9.5E-17 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_07745 1ee6e45fb948877b0a77e033045943cf 323 SUPERFAMILY SSF53850 107 313 1.15E-34 T 17-10-2018 BJD13_07745 1ee6e45fb948877b0a77e033045943cf 323 Gene3D G3DSA:3.40.190.10 116 299 9.3E-45 T 17-10-2018 BJD13_07745 1ee6e45fb948877b0a77e033045943cf 323 Gene3D G3DSA:1.10.10.10 13 102 2.7E-20 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_07745 1ee6e45fb948877b0a77e033045943cf 323 Gene3D G3DSA:3.40.190.10 178 281 9.3E-45 T 17-10-2018 BJD13_11610 a1748378737093f2c7fd20fa149b5f6a 488 SUPERFAMILY SSF56235 2 255 3.52E-65 T 17-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BJD13_11610 a1748378737093f2c7fd20fa149b5f6a 488 Pfam PF13522 Glutamine amidotransferase domain 61 193 2.4E-15 T 17-10-2018 BJD13_11610 a1748378737093f2c7fd20fa149b5f6a 488 Gene3D G3DSA:3.40.50.2020 273 442 3.5E-144 T 17-10-2018 BJD13_11610 a1748378737093f2c7fd20fa149b5f6a 488 SUPERFAMILY SSF53271 248 473 1.48E-68 T 17-10-2018 IPR029057 Phosphoribosyltransferase-like BJD13_11610 a1748378737093f2c7fd20fa149b5f6a 488 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 462 44.967 T 17-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 BJD13_11610 a1748378737093f2c7fd20fa149b5f6a 488 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 462 9.9E-161 T 17-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 BJD13_11610 a1748378737093f2c7fd20fa149b5f6a 488 Gene3D G3DSA:3.60.20.10 2 463 3.5E-144 T 17-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BJD13_11610 a1748378737093f2c7fd20fa149b5f6a 488 PIRSF PIRSF000485 1 476 9.7E-156 T 17-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 BJD13_04000 eb79cd8acb8b6b856eb3c02f982472c7 580 Gene3D G3DSA:3.40.50.2300 111 218 9.5E-40 T 17-10-2018 BJD13_04000 eb79cd8acb8b6b856eb3c02f982472c7 580 Gene3D G3DSA:3.40.50.2300 2 103 4.8E-8 T 17-10-2018 BJD13_04000 eb79cd8acb8b6b856eb3c02f982472c7 580 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 231 572 3.8E-150 T 17-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 BJD13_04000 eb79cd8acb8b6b856eb3c02f982472c7 580 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 120 203 3.0E-38 T 17-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 BJD13_04000 eb79cd8acb8b6b856eb3c02f982472c7 580 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 121 211 4.6E-18 T 17-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 BJD13_04000 eb79cd8acb8b6b856eb3c02f982472c7 580 SUPERFAMILY SSF52794 5 102 3.4E-15 T 17-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 BJD13_04000 eb79cd8acb8b6b856eb3c02f982472c7 580 SUPERFAMILY SSF52794 118 217 2.79E-36 T 17-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 BJD13_11560 d5375ce9d4ff07bcd51ddd4f68d5d77b 442 Pfam PF11808 Domain of unknown function (DUF3329) 8 93 1.4E-22 T 17-10-2018 IPR021766 Phosphate regulon sensor protein PhoR GO:0000155|GO:0000160|GO:0004721 BJD13_11560 d5375ce9d4ff07bcd51ddd4f68d5d77b 442 SUPERFAMILY SSF47384 196 273 1.06E-18 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD13_11560 d5375ce9d4ff07bcd51ddd4f68d5d77b 442 SMART SM00388 209 273 2.6E-20 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_11560 d5375ce9d4ff07bcd51ddd4f68d5d77b 442 SUPERFAMILY SSF55874 262 424 8.25E-38 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_11560 d5375ce9d4ff07bcd51ddd4f68d5d77b 442 SUPERFAMILY SSF55785 87 200 7.78E-7 T 17-10-2018 IPR035965 PAS domain superfamily BJD13_11560 d5375ce9d4ff07bcd51ddd4f68d5d77b 442 SMART SM00091 100 167 0.0092 T 17-10-2018 IPR000014 PAS domain BJD13_11560 d5375ce9d4ff07bcd51ddd4f68d5d77b 442 SMART SM00387 316 428 9.5E-32 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_11560 d5375ce9d4ff07bcd51ddd4f68d5d77b 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 367 2.8E-11 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_11560 d5375ce9d4ff07bcd51ddd4f68d5d77b 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 425 2.8E-11 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_11560 d5375ce9d4ff07bcd51ddd4f68d5d77b 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 406 2.8E-11 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_11560 d5375ce9d4ff07bcd51ddd4f68d5d77b 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 381 2.8E-11 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_11560 d5375ce9d4ff07bcd51ddd4f68d5d77b 442 Pfam PF00512 His Kinase A (phospho-acceptor) domain 210 272 4.8E-18 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_11560 d5375ce9d4ff07bcd51ddd4f68d5d77b 442 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 318 425 1.9E-22 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_11560 d5375ce9d4ff07bcd51ddd4f68d5d77b 442 Gene3D G3DSA:1.10.287.130 204 274 4.3E-23 T 17-10-2018 BJD13_11560 d5375ce9d4ff07bcd51ddd4f68d5d77b 442 Gene3D G3DSA:3.30.565.10 276 434 7.0E-37 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_11560 d5375ce9d4ff07bcd51ddd4f68d5d77b 442 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 97 424 3.6E-125 T 17-10-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 BJD13_02065 f47496c52f1f2ffcd641ee0626599df2 315 Gene3D G3DSA:3.40.50.1370 17 310 1.6E-85 T 17-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 BJD13_02065 f47496c52f1f2ffcd641ee0626599df2 315 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 12 315 39.047 T 17-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BJD13_02065 f47496c52f1f2ffcd641ee0626599df2 315 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 13 314 3.5E-83 T 17-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BJD13_02065 f47496c52f1f2ffcd641ee0626599df2 315 SUPERFAMILY SSF53671 11 315 7.46E-88 T 17-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 BJD13_02065 f47496c52f1f2ffcd641ee0626599df2 315 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 13 157 2.6E-37 T 17-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 BJD13_02065 f47496c52f1f2ffcd641ee0626599df2 315 PRINTS PR00101 Aspartate carbamoyltransferase signature 49 71 2.1E-31 T 17-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BJD13_02065 f47496c52f1f2ffcd641ee0626599df2 315 PRINTS PR00101 Aspartate carbamoyltransferase signature 87 96 2.1E-31 T 17-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BJD13_02065 f47496c52f1f2ffcd641ee0626599df2 315 PRINTS PR00101 Aspartate carbamoyltransferase signature 295 309 2.1E-31 T 17-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BJD13_02065 f47496c52f1f2ffcd641ee0626599df2 315 PRINTS PR00101 Aspartate carbamoyltransferase signature 144 161 2.1E-31 T 17-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BJD13_02065 f47496c52f1f2ffcd641ee0626599df2 315 PRINTS PR00101 Aspartate carbamoyltransferase signature 271 276 2.1E-31 T 17-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BJD13_02065 f47496c52f1f2ffcd641ee0626599df2 315 PRINTS PR00101 Aspartate carbamoyltransferase signature 230 239 2.1E-31 T 17-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BJD13_02065 f47496c52f1f2ffcd641ee0626599df2 315 Gene3D G3DSA:3.40.50.1370 145 293 1.6E-85 T 17-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 BJD13_02065 f47496c52f1f2ffcd641ee0626599df2 315 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 59 78 4.4E-21 T 17-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BJD13_02065 f47496c52f1f2ffcd641ee0626599df2 315 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 279 302 4.4E-21 T 17-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BJD13_02065 f47496c52f1f2ffcd641ee0626599df2 315 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 145 156 4.4E-21 T 17-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BJD13_02065 f47496c52f1f2ffcd641ee0626599df2 315 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 267 276 4.4E-21 T 17-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BJD13_02065 f47496c52f1f2ffcd641ee0626599df2 315 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 59 66 - T 17-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BJD13_02065 f47496c52f1f2ffcd641ee0626599df2 315 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 166 312 6.6E-22 T 17-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 BJD13_08095 756fae4e96ca26e061340961033a50cf 517 Gene3D G3DSA:3.80.30.20 231 448 4.6E-22 T 17-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe BJD13_08095 756fae4e96ca26e061340961033a50cf 517 Pfam PF02310 B12 binding domain 43 155 1.3E-8 T 17-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 BJD13_08095 756fae4e96ca26e061340961033a50cf 517 Pfam PF04055 Radical SAM superfamily 236 394 2.6E-14 T 17-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BJD13_08095 756fae4e96ca26e061340961033a50cf 517 SMART SM00729 229 439 1.8E-18 T 17-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 BJD13_08095 756fae4e96ca26e061340961033a50cf 517 SUPERFAMILY SSF102114 214 422 1.44E-32 T 17-10-2018 BJD13_16740 84db9c27aa39c7a601e5651048e06077 862 Gene3D G3DSA:2.40.170.20 234 862 1.5E-45 T 17-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BJD13_16740 84db9c27aa39c7a601e5651048e06077 862 Gene3D G3DSA:2.170.130.10 40 161 2.8E-14 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_16740 84db9c27aa39c7a601e5651048e06077 862 SUPERFAMILY SSF56935 27 861 7.69E-75 T 17-10-2018 BJD13_16740 84db9c27aa39c7a601e5651048e06077 862 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 31 861 2.6E-189 T 17-10-2018 IPR010104 Bacterial TonB-dependent receptor BJD13_16740 84db9c27aa39c7a601e5651048e06077 862 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 156 1.1E-14 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_16740 84db9c27aa39c7a601e5651048e06077 862 Pfam PF00593 TonB dependent receptor 360 861 2.3E-40 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_04010 a2996f3b069f0e835db23fc2b80e595d 838 SUPERFAMILY SSF47831 312 410 8.24E-23 T 17-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 BJD13_04010 a2996f3b069f0e835db23fc2b80e595d 838 PRINTS PR00107 Phosphocarrier protein signature 173 189 1.7E-14 T 17-10-2018 IPR000032 Phosphocarrier protein HPr-like BJD13_04010 a2996f3b069f0e835db23fc2b80e595d 838 PRINTS PR00107 Phosphocarrier protein signature 198 213 1.7E-14 T 17-10-2018 IPR000032 Phosphocarrier protein HPr-like BJD13_04010 a2996f3b069f0e835db23fc2b80e595d 838 PRINTS PR00107 Phosphocarrier protein signature 213 230 1.7E-14 T 17-10-2018 IPR000032 Phosphocarrier protein HPr-like BJD13_04010 a2996f3b069f0e835db23fc2b80e595d 838 SUPERFAMILY SSF55804 10 145 3.27E-31 T 17-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BJD13_04010 a2996f3b069f0e835db23fc2b80e595d 838 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 713 731 - T 17-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 BJD13_04010 a2996f3b069f0e835db23fc2b80e595d 838 SUPERFAMILY SSF52009 395 516 2.75E-28 T 17-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 BJD13_04010 a2996f3b069f0e835db23fc2b80e595d 838 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 564 583 5.0E-21 T 17-10-2018 BJD13_04010 a2996f3b069f0e835db23fc2b80e595d 838 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 713 728 5.0E-21 T 17-10-2018 BJD13_04010 a2996f3b069f0e835db23fc2b80e595d 838 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 766 778 5.0E-21 T 17-10-2018 BJD13_04010 a2996f3b069f0e835db23fc2b80e595d 838 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 730 745 5.0E-21 T 17-10-2018 BJD13_04010 a2996f3b069f0e835db23fc2b80e595d 838 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 164 241 1.1E-18 T 17-10-2018 IPR000032 Phosphocarrier protein HPr-like BJD13_04010 a2996f3b069f0e835db23fc2b80e595d 838 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 522 806 6.5E-106 T 17-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 BJD13_04010 a2996f3b069f0e835db23fc2b80e595d 838 Gene3D G3DSA:3.30.1340.10 162 245 9.5E-22 T 17-10-2018 IPR035895 HPr-like superfamily BJD13_04010 a2996f3b069f0e835db23fc2b80e595d 838 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 9 144 5.6E-26 T 17-10-2018 IPR002178 PTS EIIA type-2 domain BJD13_04010 a2996f3b069f0e835db23fc2b80e595d 838 Gene3D G3DSA:3.40.930.10 7 147 1.1E-28 T 17-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BJD13_04010 a2996f3b069f0e835db23fc2b80e595d 838 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 17-10-2018 IPR002178 PTS EIIA type-2 domain BJD13_04010 a2996f3b069f0e835db23fc2b80e595d 838 Pfam PF00391 PEP-utilising enzyme, mobile domain 425 496 4.9E-20 T 17-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 BJD13_04010 a2996f3b069f0e835db23fc2b80e595d 838 SUPERFAMILY SSF55594 163 242 5.76E-21 T 17-10-2018 IPR035895 HPr-like superfamily BJD13_04010 a2996f3b069f0e835db23fc2b80e595d 838 Gene3D G3DSA:1.10.274.10 294 415 1.8E-61 T 17-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 BJD13_04010 a2996f3b069f0e835db23fc2b80e595d 838 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 173 180 - T 17-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site BJD13_04010 a2996f3b069f0e835db23fc2b80e595d 838 SUPERFAMILY SSF51621 524 815 7.33E-99 T 17-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 BJD13_04010 a2996f3b069f0e835db23fc2b80e595d 838 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 275 830 3.1E-144 T 17-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 BJD13_04010 a2996f3b069f0e835db23fc2b80e595d 838 Gene3D G3DSA:3.50.30.10 277 504 1.8E-61 T 17-10-2018 BJD13_04010 a2996f3b069f0e835db23fc2b80e595d 838 Pfam PF05524 PEP-utilising enzyme, N-terminal 277 395 3.6E-19 T 17-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 BJD13_04010 a2996f3b069f0e835db23fc2b80e595d 838 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 199 214 - T 17-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site BJD13_04010 a2996f3b069f0e835db23fc2b80e595d 838 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 455 466 - T 17-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 BJD13_04010 a2996f3b069f0e835db23fc2b80e595d 838 Gene3D G3DSA:3.20.20.60 505 837 1.6E-113 T 17-10-2018 BJD13_04010 a2996f3b069f0e835db23fc2b80e595d 838 Pfam PF00381 PTS HPr component phosphorylation site 164 241 2.2E-20 T 17-10-2018 IPR000032 Phosphocarrier protein HPr-like BJD13_20935 d845d091f8a0394b0bea0b9f27a73895 454 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 394 427 3.1E-8 T 17-10-2018 IPR001451 Hexapeptide repeat BJD13_20935 d845d091f8a0394b0bea0b9f27a73895 454 SUPERFAMILY SSF53448 5 251 5.84E-59 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD13_20935 d845d091f8a0394b0bea0b9f27a73895 454 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 317 348 1.0E-4 T 17-10-2018 IPR001451 Hexapeptide repeat BJD13_20935 d845d091f8a0394b0bea0b9f27a73895 454 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 264 298 4.8E-7 T 17-10-2018 IPR001451 Hexapeptide repeat BJD13_20935 d845d091f8a0394b0bea0b9f27a73895 454 Gene3D G3DSA:3.90.550.10 4 226 6.9E-59 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD13_20935 d845d091f8a0394b0bea0b9f27a73895 454 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 6 454 4.5E-187 T 17-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 BJD13_20935 d845d091f8a0394b0bea0b9f27a73895 454 Pfam PF12804 MobA-like NTP transferase domain 7 129 1.6E-23 T 17-10-2018 IPR025877 MobA-like NTP transferase BJD13_20935 d845d091f8a0394b0bea0b9f27a73895 454 SUPERFAMILY SSF51161 255 436 1.26E-47 T 17-10-2018 IPR011004 Trimeric LpxA-like superfamily BJD13_20935 d845d091f8a0394b0bea0b9f27a73895 454 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 4 451 41.033 T 17-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 BJD13_20935 d845d091f8a0394b0bea0b9f27a73895 454 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 267 295 - T 17-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 BJD13_20935 d845d091f8a0394b0bea0b9f27a73895 454 Gene3D G3DSA:2.160.10.10 228 454 5.4E-63 T 17-10-2018 BJD13_22130 0846e64badd1820ede86cdc642978dd6 442 Gene3D G3DSA:3.90.230.10 177 440 2.1E-94 T 17-10-2018 BJD13_22130 0846e64badd1820ede86cdc642978dd6 442 Pfam PF00557 Metallopeptidase family M24 186 417 2.4E-62 T 17-10-2018 IPR000994 Peptidase M24 BJD13_22130 0846e64badd1820ede86cdc642978dd6 442 Pfam PF05195 Aminopeptidase P, N-terminal domain 12 131 8.7E-40 T 17-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 BJD13_22130 0846e64badd1820ede86cdc642978dd6 442 Gene3D G3DSA:3.40.350.10 8 176 6.4E-57 T 17-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal BJD13_22130 0846e64badd1820ede86cdc642978dd6 442 PRINTS PR00599 Methionine aminopeptidase-1 signature 257 273 1.9E-5 T 17-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 BJD13_22130 0846e64badd1820ede86cdc642978dd6 442 PRINTS PR00599 Methionine aminopeptidase-1 signature 375 387 1.9E-5 T 17-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 BJD13_22130 0846e64badd1820ede86cdc642978dd6 442 SMART SM01011 7 141 6.7E-68 T 17-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 BJD13_22130 0846e64badd1820ede86cdc642978dd6 442 SUPERFAMILY SSF55920 180 438 9.29E-82 T 17-10-2018 IPR036005 Creatinase/aminopeptidase-like BJD13_22130 0846e64badd1820ede86cdc642978dd6 442 SUPERFAMILY SSF53092 6 179 6.54E-57 T 17-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal BJD13_08260 be68a08ea195d0f07d4098cee7e626fe 505 Gene3D G3DSA:3.40.50.300 8 246 2.0E-49 T 17-10-2018 BJD13_08260 be68a08ea195d0f07d4098cee7e626fe 505 SUPERFAMILY SSF52540 10 239 6.64E-35 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_08260 be68a08ea195d0f07d4098cee7e626fe 505 SUPERFAMILY SSF52540 255 487 1.1E-37 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_08260 be68a08ea195d0f07d4098cee7e626fe 505 Pfam PF06745 KaiC 13 240 1.3E-34 T 17-10-2018 IPR014774 KaiC-like domain BJD13_08260 be68a08ea195d0f07d4098cee7e626fe 505 Pfam PF06745 KaiC 255 476 8.2E-30 T 17-10-2018 IPR014774 KaiC-like domain BJD13_08260 be68a08ea195d0f07d4098cee7e626fe 505 PIRSF PIRSF039117 1 496 4.5E-118 T 17-10-2018 IPR030665 Circadian clock protein kinase KaiC KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 BJD13_08260 be68a08ea195d0f07d4098cee7e626fe 505 Gene3D G3DSA:3.40.50.300 252 494 1.6E-51 T 17-10-2018 BJD13_08260 be68a08ea195d0f07d4098cee7e626fe 505 SMART SM00382 272 438 0.64 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_08260 be68a08ea195d0f07d4098cee7e626fe 505 SMART SM00382 29 217 0.0089 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_21530 a7c710e59039784d9c3a809c29924024 322 Gene3D G3DSA:3.20.20.80 24 322 2.3E-62 T 17-10-2018 BJD13_21530 a7c710e59039784d9c3a809c29924024 322 SUPERFAMILY SSF51445 50 301 9.91E-25 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily BJD13_18380 0c5a0bda15fcf3fa54428e8a4439116f 962 Gene3D G3DSA:2.40.170.20 353 962 2.6E-48 T 17-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BJD13_18380 0c5a0bda15fcf3fa54428e8a4439116f 962 SMART SM00965 48 99 6.8E-9 T 17-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 BJD13_18380 0c5a0bda15fcf3fa54428e8a4439116f 962 Gene3D G3DSA:2.170.130.10 140 265 3.1E-18 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_18380 0c5a0bda15fcf3fa54428e8a4439116f 962 Gene3D G3DSA:3.55.50.30 19 137 6.7E-20 T 17-10-2018 BJD13_18380 0c5a0bda15fcf3fa54428e8a4439116f 962 SUPERFAMILY SSF56935 119 962 1.68E-89 T 17-10-2018 BJD13_18380 0c5a0bda15fcf3fa54428e8a4439116f 962 Pfam PF00593 TonB dependent receptor 493 961 3.2E-41 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_18380 0c5a0bda15fcf3fa54428e8a4439116f 962 Pfam PF07715 TonB-dependent Receptor Plug Domain 152 260 5.9E-15 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_18380 0c5a0bda15fcf3fa54428e8a4439116f 962 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 129 962 1.5E-228 T 17-10-2018 IPR010104 Bacterial TonB-dependent receptor BJD13_12815 0db877f37250c24b27ad790ac88c944b 318 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 18 317 4.3E-105 T 17-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BJD13_12815 0db877f37250c24b27ad790ac88c944b 318 SUPERFAMILY SSF52440 18 112 4.32E-26 T 17-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BJD13_12815 0db877f37250c24b27ad790ac88c944b 318 Gene3D G3DSA:3.30.1490.20 127 195 1.6E-73 T 17-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BJD13_12815 0db877f37250c24b27ad790ac88c944b 318 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 17 318 35.381 T 17-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BJD13_12815 0db877f37250c24b27ad790ac88c944b 318 SUPERFAMILY SSF56059 112 315 2.05E-54 T 17-10-2018 BJD13_12815 0db877f37250c24b27ad790ac88c944b 318 Pfam PF01820 D-ala D-ala ligase N-terminus 18 102 1.4E-15 T 17-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BJD13_12815 0db877f37250c24b27ad790ac88c944b 318 Gene3D G3DSA:3.40.50.20 5 100 1.3E-27 T 17-10-2018 BJD13_12815 0db877f37250c24b27ad790ac88c944b 318 Gene3D G3DSA:3.30.470.20 101 313 1.6E-73 T 17-10-2018 BJD13_12815 0db877f37250c24b27ad790ac88c944b 318 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 79 90 - T 17-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BJD13_12815 0db877f37250c24b27ad790ac88c944b 318 Pfam PF07478 D-ala D-ala ligase C-terminus 120 314 5.1E-56 T 17-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BJD13_12815 0db877f37250c24b27ad790ac88c944b 318 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 259 288 - T 17-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BJD13_12815 0db877f37250c24b27ad790ac88c944b 318 PIRSF PIRSF039102 56 318 9.7E-84 T 17-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BJD13_12815 0db877f37250c24b27ad790ac88c944b 318 PIRSF PIRSF039102 16 58 2.2E-8 T 17-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BJD13_22155 a132f400de6e63be8e26d5b1f07dd5f0 385 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 9 352 3.3E-109 T 17-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 BJD13_22155 a132f400de6e63be8e26d5b1f07dd5f0 385 SMART SM00729 8 225 2.3E-51 T 17-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 BJD13_22155 a132f400de6e63be8e26d5b1f07dd5f0 385 SUPERFAMILY SSF102114 4 384 5.89E-107 T 17-10-2018 BJD13_22155 a132f400de6e63be8e26d5b1f07dd5f0 385 Gene3D G3DSA:3.80.30.20 2 302 1.3E-98 T 17-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe BJD13_22155 a132f400de6e63be8e26d5b1f07dd5f0 385 Pfam PF04055 Radical SAM superfamily 13 178 1.2E-20 T 17-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BJD13_22155 a132f400de6e63be8e26d5b1f07dd5f0 385 Pfam PF06969 HemN C-terminal domain 315 373 3.1E-8 T 17-10-2018 IPR010723 HemN, C-terminal BJD13_04415 63907be0ae78def74ca3efaa1481818d 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 17-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BJD13_04415 63907be0ae78def74ca3efaa1481818d 246 SUPERFAMILY SSF51735 4 244 3.46E-81 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_04415 63907be0ae78def74ca3efaa1481818d 246 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 4 244 1.7E-122 T 17-10-2018 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|MetaCyc: PWY-7948 BJD13_04415 63907be0ae78def74ca3efaa1481818d 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 1.6E-12 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_04415 63907be0ae78def74ca3efaa1481818d 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.6E-12 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_04415 63907be0ae78def74ca3efaa1481818d 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 1.6E-12 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_04415 63907be0ae78def74ca3efaa1481818d 246 Gene3D G3DSA:3.40.50.720 1 244 4.1E-80 T 17-10-2018 BJD13_04415 63907be0ae78def74ca3efaa1481818d 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 1.3E-43 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_04415 63907be0ae78def74ca3efaa1481818d 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.3E-43 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_04415 63907be0ae78def74ca3efaa1481818d 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 1.3E-43 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_04415 63907be0ae78def74ca3efaa1481818d 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.3E-43 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_04415 63907be0ae78def74ca3efaa1481818d 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 1.3E-43 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_04415 63907be0ae78def74ca3efaa1481818d 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.3E-43 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_04415 63907be0ae78def74ca3efaa1481818d 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 183 2.1E-5 T 17-10-2018 BJD13_04415 63907be0ae78def74ca3efaa1481818d 246 Pfam PF00106 short chain dehydrogenase 5 195 2.3E-59 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_13280 4f79d89a6f23a95cfaca3304249b29cc 603 Gene3D G3DSA:3.30.450.20 206 336 1.2E-10 T 17-10-2018 BJD13_13280 4f79d89a6f23a95cfaca3304249b29cc 603 PRINTS PR00344 Bacterial sensor protein C-terminal signature 554 572 3.2E-9 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_13280 4f79d89a6f23a95cfaca3304249b29cc 603 PRINTS PR00344 Bacterial sensor protein C-terminal signature 521 535 3.2E-9 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_13280 4f79d89a6f23a95cfaca3304249b29cc 603 PRINTS PR00344 Bacterial sensor protein C-terminal signature 578 591 3.2E-9 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_13280 4f79d89a6f23a95cfaca3304249b29cc 603 SUPERFAMILY SSF55874 425 592 2.36E-34 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_13280 4f79d89a6f23a95cfaca3304249b29cc 603 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 482 592 5.0E-19 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_13280 4f79d89a6f23a95cfaca3304249b29cc 603 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 228 346 2.0E-6 T 17-10-2018 IPR000014 PAS domain BJD13_13280 4f79d89a6f23a95cfaca3304249b29cc 603 Gene3D G3DSA:1.10.287.130 337 434 6.9E-18 T 17-10-2018 BJD13_13280 4f79d89a6f23a95cfaca3304249b29cc 603 Pfam PF08448 PAS fold 234 341 2.8E-6 T 17-10-2018 IPR013656 PAS fold-4 BJD13_13280 4f79d89a6f23a95cfaca3304249b29cc 603 Pfam PF05227 CHASE3 domain 43 175 1.7E-16 T 17-10-2018 IPR007891 CHASE3 BJD13_13280 4f79d89a6f23a95cfaca3304249b29cc 603 SUPERFAMILY SSF55785 209 339 3.66E-14 T 17-10-2018 IPR035965 PAS domain superfamily BJD13_13280 4f79d89a6f23a95cfaca3304249b29cc 603 Pfam PF00512 His Kinase A (phospho-acceptor) domain 370 436 3.3E-11 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_13280 4f79d89a6f23a95cfaca3304249b29cc 603 SMART SM00388 368 436 3.1E-10 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_13280 4f79d89a6f23a95cfaca3304249b29cc 603 SUPERFAMILY SSF47384 353 436 9.42E-18 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD13_13280 4f79d89a6f23a95cfaca3304249b29cc 603 Gene3D G3DSA:3.30.565.10 439 598 4.0E-31 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_13280 4f79d89a6f23a95cfaca3304249b29cc 603 SMART SM00387 481 594 9.8E-28 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_11745 d4997fc62e18ca5ccb0836fba5ed493b 164 Gene3D G3DSA:2.40.100.10 3 144 1.9E-61 T 17-10-2018 IPR029000 Cyclophilin-like domain superfamily BJD13_11745 d4997fc62e18ca5ccb0836fba5ed493b 164 PIRSF PIRSF001467 2 156 7.2E-56 T 17-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 BJD13_11745 d4997fc62e18ca5ccb0836fba5ed493b 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 18 33 3.4E-35 T 17-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 BJD13_11745 d4997fc62e18ca5ccb0836fba5ed493b 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 83 98 3.4E-35 T 17-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 BJD13_11745 d4997fc62e18ca5ccb0836fba5ed493b 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 111 126 3.4E-35 T 17-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 BJD13_11745 d4997fc62e18ca5ccb0836fba5ed493b 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 98 110 3.4E-35 T 17-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 BJD13_11745 d4997fc62e18ca5ccb0836fba5ed493b 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 44 56 3.4E-35 T 17-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 BJD13_11745 d4997fc62e18ca5ccb0836fba5ed493b 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 39 56 - T 17-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 BJD13_11745 d4997fc62e18ca5ccb0836fba5ed493b 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 5 136 3.1E-50 T 17-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 BJD13_11745 d4997fc62e18ca5ccb0836fba5ed493b 164 SUPERFAMILY SSF50891 4 136 1.61E-58 T 17-10-2018 IPR029000 Cyclophilin-like domain superfamily BJD13_23650 da1ca533d5b332e580cbdef398da628e 923 SUPERFAMILY SSF56935 27 923 1.19E-104 T 17-10-2018 BJD13_23650 da1ca533d5b332e580cbdef398da628e 923 Gene3D G3DSA:2.170.130.10 33 163 3.7E-38 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_23650 da1ca533d5b332e580cbdef398da628e 923 Gene3D G3DSA:2.40.170.20 164 420 4.2E-6 T 17-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BJD13_23650 da1ca533d5b332e580cbdef398da628e 923 Pfam PF00593 TonB dependent receptor 331 921 5.3E-44 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_23650 da1ca533d5b332e580cbdef398da628e 923 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 160 1.8E-27 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_14080 ef3ced32c92846fe97e16e398eafb955 423 Gene3D G3DSA:3.40.50.1240 38 394 3.4E-87 T 17-10-2018 IPR029033 Histidine phosphatase superfamily BJD13_14080 ef3ced32c92846fe97e16e398eafb955 423 Gene3D G3DSA:3.40.50.1240 159 263 3.4E-87 T 17-10-2018 IPR029033 Histidine phosphatase superfamily BJD13_14080 ef3ced32c92846fe97e16e398eafb955 423 Pfam PF00328 Histidine phosphatase superfamily (branch 2) 39 141 4.2E-8 T 17-10-2018 IPR000560 Histidine phosphatase superfamily, clade-2 BJD13_14080 ef3ced32c92846fe97e16e398eafb955 423 SUPERFAMILY SSF53254 38 401 5.15E-39 T 17-10-2018 IPR029033 Histidine phosphatase superfamily BJD13_11245 378f44f335945239e8cc79b49c4e8d1d 159 Pfam PF04002 RadC-like JAB domain 38 157 5.2E-42 T 17-10-2018 IPR025657 RadC-like JAB domain BJD13_11245 378f44f335945239e8cc79b49c4e8d1d 159 SUPERFAMILY SSF102712 58 129 5.49E-6 T 17-10-2018 BJD13_11245 378f44f335945239e8cc79b49c4e8d1d 159 TIGRFAM TIGR00608 radc: DNA repair protein RadC 23 158 1.1E-41 T 17-10-2018 IPR001405 Uncharacterised protein family UPF0758 BJD13_11245 378f44f335945239e8cc79b49c4e8d1d 159 Gene3D G3DSA:3.40.140.10 35 158 7.4E-41 T 17-10-2018 BJD13_11245 378f44f335945239e8cc79b49c4e8d1d 159 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 108 113 - T 17-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site BJD13_21480 841c64c53a924d427d8406a60060c019 767 PRINTS PR00811 Bacterial general secretion pathway protein D signature 702 720 2.8E-15 T 17-10-2018 IPR001775 GspD/PilQ family BJD13_21480 841c64c53a924d427d8406a60060c019 767 PRINTS PR00811 Bacterial general secretion pathway protein D signature 482 492 2.8E-15 T 17-10-2018 IPR001775 GspD/PilQ family BJD13_21480 841c64c53a924d427d8406a60060c019 767 PRINTS PR00811 Bacterial general secretion pathway protein D signature 559 583 2.8E-15 T 17-10-2018 IPR001775 GspD/PilQ family BJD13_21480 841c64c53a924d427d8406a60060c019 767 PRINTS PR00811 Bacterial general secretion pathway protein D signature 725 739 2.8E-15 T 17-10-2018 IPR001775 GspD/PilQ family BJD13_21480 841c64c53a924d427d8406a60060c019 767 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 683 716 - T 17-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 BJD13_21480 841c64c53a924d427d8406a60060c019 767 Gene3D G3DSA:3.30.1370.120 95 250 2.5E-29 T 17-10-2018 IPR038591 NolW-like superfamily BJD13_21480 841c64c53a924d427d8406a60060c019 767 Pfam PF00263 Bacterial type II and III secretion system protein 563 738 3.5E-44 T 17-10-2018 IPR004846 Type II/III secretion system GO:0009306 BJD13_21480 841c64c53a924d427d8406a60060c019 767 Pfam PF03958 Bacterial type II/III secretion system short domain 259 326 2.5E-7 T 17-10-2018 IPR005644 NolW-like BJD13_21480 841c64c53a924d427d8406a60060c019 767 Pfam PF03958 Bacterial type II/III secretion system short domain 333 482 1.4E-10 T 17-10-2018 IPR005644 NolW-like BJD13_21480 841c64c53a924d427d8406a60060c019 767 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 98 747 3.7E-181 T 17-10-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 BJD13_21185 c1d8d58f802f10469abbd70131587ab2 314 Gene3D G3DSA:3.40.50.620 3 185 2.8E-40 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD13_21185 c1d8d58f802f10469abbd70131587ab2 314 Gene3D G3DSA:3.40.50.1220 188 314 2.5E-54 T 17-10-2018 BJD13_21185 c1d8d58f802f10469abbd70131587ab2 314 SMART SM00893 4 186 1.3E-36 T 17-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 BJD13_21185 c1d8d58f802f10469abbd70131587ab2 314 Pfam PF01012 Electron transfer flavoprotein domain 4 173 8.6E-32 T 17-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 BJD13_21185 c1d8d58f802f10469abbd70131587ab2 314 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 257 283 - T 17-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 BJD13_21185 c1d8d58f802f10469abbd70131587ab2 314 SUPERFAMILY SSF52467 191 312 1.51E-46 T 17-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily BJD13_21185 c1d8d58f802f10469abbd70131587ab2 314 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 194 276 3.5E-35 T 17-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 BJD13_21185 c1d8d58f802f10469abbd70131587ab2 314 PIRSF PIRSF000089 1 314 1.6E-103 T 17-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 BJD13_21185 c1d8d58f802f10469abbd70131587ab2 314 SUPERFAMILY SSF52402 3 180 2.51E-42 T 17-10-2018 BJD13_13815 a8e44b3424b14edf49792683cab05b10 324 Pfam PF13410 Glutathione S-transferase, C-terminal domain 202 272 5.8E-14 T 17-10-2018 BJD13_13815 a8e44b3424b14edf49792683cab05b10 324 Pfam PF13409 Glutathione S-transferase, N-terminal domain 62 157 3.0E-22 T 17-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 BJD13_13815 a8e44b3424b14edf49792683cab05b10 324 Gene3D G3DSA:1.20.1050.10 182 324 1.5E-69 T 17-10-2018 BJD13_13815 a8e44b3424b14edf49792683cab05b10 324 Gene3D G3DSA:3.40.30.130 1 181 9.4E-75 T 17-10-2018 BJD13_13815 a8e44b3424b14edf49792683cab05b10 324 SUPERFAMILY SSF47616 175 322 1.95E-38 T 17-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily BJD13_13815 a8e44b3424b14edf49792683cab05b10 324 SUPERFAMILY SSF52833 41 161 1.6E-15 T 17-10-2018 IPR036249 Thioredoxin-like superfamily BJD13_13815 a8e44b3424b14edf49792683cab05b10 324 PIRSF PIRSF015753 5 323 4.4E-135 T 17-10-2018 IPR016639 Glutathione S-transferase Omega/GSH GO:0004364 BJD13_03490 ad4c084a5fbcd6a9cd673a667add525a 492 SUPERFAMILY SSF103473 1 486 8.63E-33 T 17-10-2018 IPR036259 MFS transporter superfamily BJD13_03490 ad4c084a5fbcd6a9cd673a667add525a 492 Gene3D G3DSA:1.20.1250.20 293 489 3.0E-7 T 17-10-2018 BJD13_03490 ad4c084a5fbcd6a9cd673a667add525a 492 Gene3D G3DSA:1.20.1250.20 9 240 1.3E-17 T 17-10-2018 BJD13_03490 ad4c084a5fbcd6a9cd673a667add525a 492 Pfam PF07690 Major Facilitator Superfamily 16 448 3.9E-17 T 17-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD13_12425 7be34b2fea441956d2f9d8020474cd78 250 PRINTS PR00111 Alpha/beta hydrolase fold signature 77 90 3.5E-6 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD13_12425 7be34b2fea441956d2f9d8020474cd78 250 PRINTS PR00111 Alpha/beta hydrolase fold signature 193 207 3.5E-6 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD13_12425 7be34b2fea441956d2f9d8020474cd78 250 PRINTS PR00111 Alpha/beta hydrolase fold signature 91 104 3.5E-6 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD13_12425 7be34b2fea441956d2f9d8020474cd78 250 Gene3D G3DSA:3.40.50.1820 7 250 9.6E-45 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_12425 7be34b2fea441956d2f9d8020474cd78 250 SUPERFAMILY SSF53474 16 248 1.09E-46 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_12425 7be34b2fea441956d2f9d8020474cd78 250 Pfam PF12697 Alpha/beta hydrolase family 45 242 1.3E-11 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD13_12935 ff09ac1d772c065f812067e12e924259 209 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 10 194 31.931 T 17-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 BJD13_12935 ff09ac1d772c065f812067e12e924259 209 PIRSF PIRSF001296 10 198 1.0E-68 T 17-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 BJD13_12935 ff09ac1d772c065f812067e12e924259 209 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 16 193 3.4E-50 T 17-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 BJD13_12935 ff09ac1d772c065f812067e12e924259 209 Pfam PF02669 K+-transporting ATPase, c chain 16 192 3.5E-63 T 17-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 BJD13_07180 8b5b29ae66908254f9a8a071080baca8 258 SUPERFAMILY SSF51366 1 255 5.18E-71 T 17-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 BJD13_07180 8b5b29ae66908254f9a8a071080baca8 258 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 255 43.733 T 17-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 BJD13_07180 8b5b29ae66908254f9a8a071080baca8 258 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 255 7.6E-101 T 17-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 BJD13_07180 8b5b29ae66908254f9a8a071080baca8 258 Pfam PF00977 Histidine biosynthesis protein 5 238 4.4E-72 T 17-10-2018 IPR006062 Histidine biosynthesis GO:0000105 BJD13_07180 8b5b29ae66908254f9a8a071080baca8 258 Gene3D G3DSA:3.20.20.70 1 258 3.2E-91 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD13_09110 4a1295bad7e5262c7f331992f5203cb7 324 SMART SM00267 155 323 6.1E-52 T 17-10-2018 IPR000160 GGDEF domain BJD13_09110 4a1295bad7e5262c7f331992f5203cb7 324 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 162 323 2.9E-41 T 17-10-2018 IPR000160 GGDEF domain BJD13_09110 4a1295bad7e5262c7f331992f5203cb7 324 Gene3D G3DSA:3.30.70.270 153 324 4.5E-48 T 17-10-2018 BJD13_09110 4a1295bad7e5262c7f331992f5203cb7 324 SUPERFAMILY SSF55073 171 322 8.63E-41 T 17-10-2018 IPR029787 Nucleotide cyclase BJD13_09110 4a1295bad7e5262c7f331992f5203cb7 324 Pfam PF00990 Diguanylate cyclase, GGDEF domain 166 318 5.7E-37 T 17-10-2018 IPR000160 GGDEF domain BJD13_01735 96292a21dfd231e2ce3c1b44409057f9 453 Pfam PF01769 Divalent cation transporter 323 444 7.7E-27 T 17-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 BJD13_01735 96292a21dfd231e2ce3c1b44409057f9 453 Pfam PF03448 MgtE intracellular N domain 37 137 3.0E-27 T 17-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain BJD13_01735 96292a21dfd231e2ce3c1b44409057f9 453 Gene3D G3DSA:1.25.60.10 9 134 7.0E-19 T 17-10-2018 IPR038076 MgtE, N-terminal domain superfamily BJD13_01735 96292a21dfd231e2ce3c1b44409057f9 453 SUPERFAMILY SSF54631 138 277 2.15E-25 T 17-10-2018 BJD13_01735 96292a21dfd231e2ce3c1b44409057f9 453 Pfam PF00571 CBS domain 221 257 9.2E-4 T 17-10-2018 IPR000644 CBS domain BJD13_01735 96292a21dfd231e2ce3c1b44409057f9 453 SMART SM00924 36 139 1.1E-37 T 17-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain BJD13_01735 96292a21dfd231e2ce3c1b44409057f9 453 Gene3D G3DSA:3.10.580.10 135 262 7.0E-38 T 17-10-2018 BJD13_01735 96292a21dfd231e2ce3c1b44409057f9 453 SUPERFAMILY SSF158791 13 136 9.29E-30 T 17-10-2018 BJD13_01735 96292a21dfd231e2ce3c1b44409057f9 453 TIGRFAM TIGR00400 mgtE: magnesium transporter 21 451 5.6E-87 T 17-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 BJD13_01735 96292a21dfd231e2ce3c1b44409057f9 453 Gene3D G3DSA:1.10.357.20 278 451 1.1E-51 T 17-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain BJD13_01735 96292a21dfd231e2ce3c1b44409057f9 453 SUPERFAMILY SSF161093 280 451 2.35E-49 T 17-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 BJD13_06310 1edf054d9ecd6c806ca7ce83fa3cfd1d 250 Gene3D G3DSA:3.40.630.70 67 244 3.3E-61 T 17-10-2018 BJD13_06310 1edf054d9ecd6c806ca7ce83fa3cfd1d 250 SUPERFAMILY SSF55729 13 234 5.93E-87 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD13_06310 1edf054d9ecd6c806ca7ce83fa3cfd1d 250 Gene3D G3DSA:2.30.210.20 10 66 1.2E-26 T 17-10-2018 BJD13_06310 1edf054d9ecd6c806ca7ce83fa3cfd1d 250 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 250 96.527 T 17-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 BJD13_06310 1edf054d9ecd6c806ca7ce83fa3cfd1d 250 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 39 224 3.7E-59 T 17-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 BJD13_06310 1edf054d9ecd6c806ca7ce83fa3cfd1d 250 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 40 210 1.9E-69 T 17-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 BJD13_13660 4bc64fbd22d95f6e8b65ed1ea834a9b9 858 Pfam PF01590 GAF domain 60 162 1.1E-7 T 17-10-2018 IPR003018 GAF domain GO:0005515 BJD13_13660 4bc64fbd22d95f6e8b65ed1ea834a9b9 858 SMART SM00086 254 296 7.2 T 17-10-2018 IPR001610 PAC motif BJD13_13660 4bc64fbd22d95f6e8b65ed1ea834a9b9 858 SMART SM00086 391 433 0.0032 T 17-10-2018 IPR001610 PAC motif BJD13_13660 4bc64fbd22d95f6e8b65ed1ea834a9b9 858 SMART SM00086 518 560 5.0E-8 T 17-10-2018 IPR001610 PAC motif BJD13_13660 4bc64fbd22d95f6e8b65ed1ea834a9b9 858 SUPERFAMILY SSF55785 451 561 3.4E-24 T 17-10-2018 IPR035965 PAS domain superfamily BJD13_13660 4bc64fbd22d95f6e8b65ed1ea834a9b9 858 SMART SM00267 683 856 5.2E-44 T 17-10-2018 IPR000160 GGDEF domain BJD13_13660 4bc64fbd22d95f6e8b65ed1ea834a9b9 858 Pfam PF08448 PAS fold 316 433 1.0E-8 T 17-10-2018 IPR013656 PAS fold-4 BJD13_13660 4bc64fbd22d95f6e8b65ed1ea834a9b9 858 Pfam PF08448 PAS fold 579 683 5.6E-13 T 17-10-2018 IPR013656 PAS fold-4 BJD13_13660 4bc64fbd22d95f6e8b65ed1ea834a9b9 858 Pfam PF08448 PAS fold 182 297 3.4E-8 T 17-10-2018 IPR013656 PAS fold-4 BJD13_13660 4bc64fbd22d95f6e8b65ed1ea834a9b9 858 Gene3D G3DSA:3.30.450.40 22 173 8.6E-18 T 17-10-2018 IPR029016 GAF-like domain superfamily BJD13_13660 4bc64fbd22d95f6e8b65ed1ea834a9b9 858 SUPERFAMILY SSF55785 293 431 4.19E-20 T 17-10-2018 IPR035965 PAS domain superfamily BJD13_13660 4bc64fbd22d95f6e8b65ed1ea834a9b9 858 SUPERFAMILY SSF55785 557 681 1.7E-19 T 17-10-2018 IPR035965 PAS domain superfamily BJD13_13660 4bc64fbd22d95f6e8b65ed1ea834a9b9 858 Pfam PF00990 Diguanylate cyclase, GGDEF domain 694 849 6.9E-39 T 17-10-2018 IPR000160 GGDEF domain BJD13_13660 4bc64fbd22d95f6e8b65ed1ea834a9b9 858 Gene3D G3DSA:3.30.450.20 445 560 4.5E-23 T 17-10-2018 BJD13_13660 4bc64fbd22d95f6e8b65ed1ea834a9b9 858 Pfam PF08447 PAS fold 470 552 3.4E-13 T 17-10-2018 IPR013655 PAS fold-3 GO:0005515 BJD13_13660 4bc64fbd22d95f6e8b65ed1ea834a9b9 858 Gene3D G3DSA:3.30.450.20 562 692 3.3E-18 T 17-10-2018 BJD13_13660 4bc64fbd22d95f6e8b65ed1ea834a9b9 858 SUPERFAMILY SSF55781 33 168 5.56E-25 T 17-10-2018 BJD13_13660 4bc64fbd22d95f6e8b65ed1ea834a9b9 858 SUPERFAMILY SSF55785 165 294 5.93E-13 T 17-10-2018 IPR035965 PAS domain superfamily BJD13_13660 4bc64fbd22d95f6e8b65ed1ea834a9b9 858 SUPERFAMILY SSF55073 699 849 1.19E-40 T 17-10-2018 IPR029787 Nucleotide cyclase BJD13_13660 4bc64fbd22d95f6e8b65ed1ea834a9b9 858 Gene3D G3DSA:3.30.70.270 693 853 6.8E-48 T 17-10-2018 BJD13_13660 4bc64fbd22d95f6e8b65ed1ea834a9b9 858 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 692 849 2.1E-36 T 17-10-2018 IPR000160 GGDEF domain BJD13_13660 4bc64fbd22d95f6e8b65ed1ea834a9b9 858 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 445 567 1.2E-26 T 17-10-2018 IPR000014 PAS domain BJD13_13660 4bc64fbd22d95f6e8b65ed1ea834a9b9 858 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 307 439 6.8E-14 T 17-10-2018 IPR000014 PAS domain BJD13_13660 4bc64fbd22d95f6e8b65ed1ea834a9b9 858 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 568 687 7.1E-8 T 17-10-2018 IPR000014 PAS domain BJD13_13660 4bc64fbd22d95f6e8b65ed1ea834a9b9 858 Gene3D G3DSA:3.30.450.20 304 444 2.7E-23 T 17-10-2018 BJD13_13660 4bc64fbd22d95f6e8b65ed1ea834a9b9 858 SMART SM00091 308 375 1.1E-7 T 17-10-2018 IPR000014 PAS domain BJD13_13660 4bc64fbd22d95f6e8b65ed1ea834a9b9 858 SMART SM00091 176 246 16.0 T 17-10-2018 IPR000014 PAS domain BJD13_13660 4bc64fbd22d95f6e8b65ed1ea834a9b9 858 SMART SM00091 572 638 0.0022 T 17-10-2018 IPR000014 PAS domain BJD13_13660 4bc64fbd22d95f6e8b65ed1ea834a9b9 858 SMART SM00091 445 511 4.9E-14 T 17-10-2018 IPR000014 PAS domain BJD13_13660 4bc64fbd22d95f6e8b65ed1ea834a9b9 858 Gene3D G3DSA:3.30.450.20 174 299 5.8E-11 T 17-10-2018 BJD13_20590 fdcc7b24f76e155a092af39020160e8d 689 SUPERFAMILY SSF55486 37 689 1.25E-196 T 17-10-2018 BJD13_20590 fdcc7b24f76e155a092af39020160e8d 689 Pfam PF01431 Peptidase family M13 486 686 4.3E-61 T 17-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 BJD13_20590 fdcc7b24f76e155a092af39020160e8d 689 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 517 533 1.4E-17 T 17-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 BJD13_20590 fdcc7b24f76e155a092af39020160e8d 689 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 478 490 1.4E-17 T 17-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 BJD13_20590 fdcc7b24f76e155a092af39020160e8d 689 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 496 508 1.4E-17 T 17-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 BJD13_20590 fdcc7b24f76e155a092af39020160e8d 689 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 588 599 1.4E-17 T 17-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 BJD13_20590 fdcc7b24f76e155a092af39020160e8d 689 Gene3D G3DSA:3.40.390.10 44 689 1.1E-215 T 17-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 BJD13_20590 fdcc7b24f76e155a092af39020160e8d 689 Pfam PF05649 Peptidase family M13 49 434 7.7E-89 T 17-10-2018 IPR008753 Peptidase M13, N-terminal domain GO:0006508 BJD13_20590 fdcc7b24f76e155a092af39020160e8d 689 Gene3D G3DSA:1.10.1380.10 75 473 1.1E-215 T 17-10-2018 BJD13_15015 67a2dcc6de558fa3b5ad52bfe9705ee2 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.9E-5 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_15015 67a2dcc6de558fa3b5ad52bfe9705ee2 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.9E-5 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_15015 67a2dcc6de558fa3b5ad52bfe9705ee2 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 1.9E-5 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_15015 67a2dcc6de558fa3b5ad52bfe9705ee2 260 Gene3D G3DSA:3.40.50.720 1 260 3.3E-65 T 17-10-2018 BJD13_15015 67a2dcc6de558fa3b5ad52bfe9705ee2 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 254 8.2E-39 T 17-10-2018 BJD13_15015 67a2dcc6de558fa3b5ad52bfe9705ee2 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 9.3E-23 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_15015 67a2dcc6de558fa3b5ad52bfe9705ee2 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 9.3E-23 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_15015 67a2dcc6de558fa3b5ad52bfe9705ee2 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 9.3E-23 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_15015 67a2dcc6de558fa3b5ad52bfe9705ee2 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 9.3E-23 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_15015 67a2dcc6de558fa3b5ad52bfe9705ee2 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 9.3E-23 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_15015 67a2dcc6de558fa3b5ad52bfe9705ee2 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 9.3E-23 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_15015 67a2dcc6de558fa3b5ad52bfe9705ee2 260 SUPERFAMILY SSF51735 7 255 1.29E-60 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_15715 311c77fecea38cd1e9cba458d2d2b8e1 206 SUPERFAMILY SSF48498 87 200 1.99E-11 T 17-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BJD13_15715 311c77fecea38cd1e9cba458d2d2b8e1 206 SUPERFAMILY SSF46689 10 92 2.17E-19 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_15715 311c77fecea38cd1e9cba458d2d2b8e1 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 66 1.9E-16 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD13_15715 311c77fecea38cd1e9cba458d2d2b8e1 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 9.3E-11 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD13_15715 311c77fecea38cd1e9cba458d2d2b8e1 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 9.3E-11 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD13_15715 311c77fecea38cd1e9cba458d2d2b8e1 206 Gene3D G3DSA:1.10.357.10 10 206 8.3E-42 T 17-10-2018 BJD13_03925 088ad5f9a31a66592a87bb255f426d00 143 Pfam PF01037 Lrp/AsnC ligand binding domain 69 139 1.3E-13 T 17-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain BJD13_03925 088ad5f9a31a66592a87bb255f426d00 143 SUPERFAMILY SSF46785 5 56 3.02E-12 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_03925 088ad5f9a31a66592a87bb255f426d00 143 SMART SM00344 7 109 1.6E-20 T 17-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 BJD13_03925 088ad5f9a31a66592a87bb255f426d00 143 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 9.6E-14 T 17-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BJD13_03925 088ad5f9a31a66592a87bb255f426d00 143 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 9.6E-14 T 17-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BJD13_03925 088ad5f9a31a66592a87bb255f426d00 143 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 9.6E-14 T 17-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BJD13_03925 088ad5f9a31a66592a87bb255f426d00 143 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 17-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site BJD13_03925 088ad5f9a31a66592a87bb255f426d00 143 Pfam PF13412 Winged helix-turn-helix DNA-binding 5 49 1.1E-14 T 17-10-2018 BJD13_03925 088ad5f9a31a66592a87bb255f426d00 143 Gene3D G3DSA:3.30.70.920 67 140 8.6E-15 T 17-10-2018 BJD13_03925 088ad5f9a31a66592a87bb255f426d00 143 Gene3D G3DSA:1.10.10.10 5 55 5.9E-18 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_03925 088ad5f9a31a66592a87bb255f426d00 143 SUPERFAMILY SSF54909 65 142 1.47E-14 T 17-10-2018 IPR011008 Dimeric alpha-beta barrel BJD13_11025 cebb182a59dff006a2f8d6c80ae5d0cb 864 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 2 859 0.0 T 17-10-2018 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 BJD13_11025 cebb182a59dff006a2f8d6c80ae5d0cb 864 Gene3D G3DSA:3.20.19.10 620 858 7.3E-84 T 17-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 BJD13_11025 cebb182a59dff006a2f8d6c80ae5d0cb 864 Pfam PF00694 Aconitase C-terminal domain 657 787 1.3E-29 T 17-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 BJD13_11025 cebb182a59dff006a2f8d6c80ae5d0cb 864 PRINTS PR00415 Aconitase family signature 360 374 4.3E-28 T 17-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BJD13_11025 cebb182a59dff006a2f8d6c80ae5d0cb 864 PRINTS PR00415 Aconitase family signature 402 413 4.3E-28 T 17-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BJD13_11025 cebb182a59dff006a2f8d6c80ae5d0cb 864 PRINTS PR00415 Aconitase family signature 191 204 4.3E-28 T 17-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BJD13_11025 cebb182a59dff006a2f8d6c80ae5d0cb 864 PRINTS PR00415 Aconitase family signature 464 477 4.3E-28 T 17-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BJD13_11025 cebb182a59dff006a2f8d6c80ae5d0cb 864 PRINTS PR00415 Aconitase family signature 205 220 4.3E-28 T 17-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BJD13_11025 cebb182a59dff006a2f8d6c80ae5d0cb 864 PRINTS PR00415 Aconitase family signature 138 151 4.3E-28 T 17-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BJD13_11025 cebb182a59dff006a2f8d6c80ae5d0cb 864 PRINTS PR00415 Aconitase family signature 267 280 4.3E-28 T 17-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BJD13_11025 cebb182a59dff006a2f8d6c80ae5d0cb 864 PRINTS PR00415 Aconitase family signature 162 170 4.3E-28 T 17-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BJD13_11025 cebb182a59dff006a2f8d6c80ae5d0cb 864 PRINTS PR00415 Aconitase family signature 281 294 4.3E-28 T 17-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BJD13_11025 cebb182a59dff006a2f8d6c80ae5d0cb 864 SUPERFAMILY SSF53732 22 588 2.88E-181 T 17-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 BJD13_11025 cebb182a59dff006a2f8d6c80ae5d0cb 864 Gene3D G3DSA:3.30.499.20 10 360 2.7E-127 T 17-10-2018 BJD13_11025 cebb182a59dff006a2f8d6c80ae5d0cb 864 Gene3D G3DSA:3.30.499.10 361 561 1.5E-74 T 17-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 BJD13_11025 cebb182a59dff006a2f8d6c80ae5d0cb 864 Gene3D G3DSA:1.10.1440.20 562 619 5.1E-9 T 17-10-2018 BJD13_11025 cebb182a59dff006a2f8d6c80ae5d0cb 864 Pfam PF00330 Aconitase family (aconitate hydratase) 70 533 1.7E-144 T 17-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BJD13_11025 cebb182a59dff006a2f8d6c80ae5d0cb 864 SUPERFAMILY SSF52016 599 857 2.55E-67 T 17-10-2018 BJD13_04145 8131d27c972226a389431eeacd37ec56 528 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 28 513 4.4E-116 T 17-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 BJD13_04145 8131d27c972226a389431eeacd37ec56 528 SUPERFAMILY SSF103473 19 524 5.49E-65 T 17-10-2018 IPR036259 MFS transporter superfamily BJD13_04145 8131d27c972226a389431eeacd37ec56 528 Pfam PF07690 Major Facilitator Superfamily 33 425 2.7E-50 T 17-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD13_04145 8131d27c972226a389431eeacd37ec56 528 PRINTS PR01036 Tetracycline resistance protein TetB signature 151 175 9.5E-5 T 17-10-2018 BJD13_04145 8131d27c972226a389431eeacd37ec56 528 PRINTS PR01036 Tetracycline resistance protein TetB signature 30 54 9.5E-5 T 17-10-2018 BJD13_04145 8131d27c972226a389431eeacd37ec56 528 PRINTS PR01036 Tetracycline resistance protein TetB signature 121 141 9.5E-5 T 17-10-2018 BJD13_04145 8131d27c972226a389431eeacd37ec56 528 Gene3D G3DSA:1.20.1720.10 28 233 2.6E-39 T 17-10-2018 BJD13_04915 445f1b0a2ca5d64761d6291022b17598 561 Gene3D G3DSA:2.40.50.140 446 527 3.9E-18 T 17-10-2018 BJD13_04915 445f1b0a2ca5d64761d6291022b17598 561 SUPERFAMILY SSF50249 345 441 6.04E-22 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD13_04915 445f1b0a2ca5d64761d6291022b17598 561 Gene3D G3DSA:2.40.50.140 188 269 9.3E-28 T 17-10-2018 BJD13_04915 445f1b0a2ca5d64761d6291022b17598 561 PRINTS PR00681 Ribosomal protein S1 signature 22 40 1.6E-86 T 17-10-2018 BJD13_04915 445f1b0a2ca5d64761d6291022b17598 561 PRINTS PR00681 Ribosomal protein S1 signature 109 125 1.6E-86 T 17-10-2018 BJD13_04915 445f1b0a2ca5d64761d6291022b17598 561 PRINTS PR00681 Ribosomal protein S1 signature 331 349 1.6E-86 T 17-10-2018 BJD13_04915 445f1b0a2ca5d64761d6291022b17598 561 PRINTS PR00681 Ribosomal protein S1 signature 291 310 1.6E-86 T 17-10-2018 BJD13_04915 445f1b0a2ca5d64761d6291022b17598 561 PRINTS PR00681 Ribosomal protein S1 signature 127 144 1.6E-86 T 17-10-2018 BJD13_04915 445f1b0a2ca5d64761d6291022b17598 561 PRINTS PR00681 Ribosomal protein S1 signature 40 54 1.6E-86 T 17-10-2018 BJD13_04915 445f1b0a2ca5d64761d6291022b17598 561 PRINTS PR00681 Ribosomal protein S1 signature 85 104 1.6E-86 T 17-10-2018 BJD13_04915 445f1b0a2ca5d64761d6291022b17598 561 PRINTS PR00681 Ribosomal protein S1 signature 156 176 1.6E-86 T 17-10-2018 BJD13_04915 445f1b0a2ca5d64761d6291022b17598 561 PRINTS PR00681 Ribosomal protein S1 signature 213 234 1.6E-86 T 17-10-2018 BJD13_04915 445f1b0a2ca5d64761d6291022b17598 561 SUPERFAMILY SSF50249 431 537 3.88E-20 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD13_04915 445f1b0a2ca5d64761d6291022b17598 561 PIRSF PIRSF002111 1 535 1.9E-213 T 17-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 BJD13_04915 445f1b0a2ca5d64761d6291022b17598 561 Gene3D G3DSA:2.40.50.140 7 98 8.1E-16 T 17-10-2018 BJD13_04915 445f1b0a2ca5d64761d6291022b17598 561 SUPERFAMILY SSF50249 104 186 2.24E-14 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD13_04915 445f1b0a2ca5d64761d6291022b17598 561 Pfam PF00575 S1 RNA binding domain 451 521 5.6E-13 T 17-10-2018 IPR003029 S1 domain GO:0003676 BJD13_04915 445f1b0a2ca5d64761d6291022b17598 561 Pfam PF00575 S1 RNA binding domain 104 172 1.8E-10 T 17-10-2018 IPR003029 S1 domain GO:0003676 BJD13_04915 445f1b0a2ca5d64761d6291022b17598 561 Pfam PF00575 S1 RNA binding domain 277 348 1.3E-22 T 17-10-2018 IPR003029 S1 domain GO:0003676 BJD13_04915 445f1b0a2ca5d64761d6291022b17598 561 Pfam PF00575 S1 RNA binding domain 189 261 1.5E-22 T 17-10-2018 IPR003029 S1 domain GO:0003676 BJD13_04915 445f1b0a2ca5d64761d6291022b17598 561 Pfam PF00575 S1 RNA binding domain 18 87 1.2E-4 T 17-10-2018 IPR003029 S1 domain GO:0003676 BJD13_04915 445f1b0a2ca5d64761d6291022b17598 561 Pfam PF00575 S1 RNA binding domain 362 435 1.1E-19 T 17-10-2018 IPR003029 S1 domain GO:0003676 BJD13_04915 445f1b0a2ca5d64761d6291022b17598 561 SUPERFAMILY SSF50249 191 277 4.62E-27 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD13_04915 445f1b0a2ca5d64761d6291022b17598 561 SUPERFAMILY SSF50249 1 113 2.09E-21 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD13_04915 445f1b0a2ca5d64761d6291022b17598 561 SMART SM00316 20 88 5.7E-6 T 17-10-2018 IPR022967 RNA-binding domain, S1 BJD13_04915 445f1b0a2ca5d64761d6291022b17598 561 SMART SM00316 363 435 1.1E-20 T 17-10-2018 IPR022967 RNA-binding domain, S1 BJD13_04915 445f1b0a2ca5d64761d6291022b17598 561 SMART SM00316 276 348 1.2E-27 T 17-10-2018 IPR022967 RNA-binding domain, S1 BJD13_04915 445f1b0a2ca5d64761d6291022b17598 561 SMART SM00316 450 521 5.4E-16 T 17-10-2018 IPR022967 RNA-binding domain, S1 BJD13_04915 445f1b0a2ca5d64761d6291022b17598 561 SMART SM00316 191 261 1.3E-28 T 17-10-2018 IPR022967 RNA-binding domain, S1 BJD13_04915 445f1b0a2ca5d64761d6291022b17598 561 SMART SM00316 104 172 7.1E-9 T 17-10-2018 IPR022967 RNA-binding domain, S1 BJD13_04915 445f1b0a2ca5d64761d6291022b17598 561 Gene3D G3DSA:2.40.50.140 359 445 5.1E-24 T 17-10-2018 BJD13_04915 445f1b0a2ca5d64761d6291022b17598 561 Gene3D G3DSA:2.40.50.140 270 358 3.0E-30 T 17-10-2018 BJD13_04915 445f1b0a2ca5d64761d6291022b17598 561 Gene3D G3DSA:2.40.50.140 99 185 1.5E-7 T 17-10-2018 BJD13_04915 445f1b0a2ca5d64761d6291022b17598 561 SUPERFAMILY SSF50249 256 364 1.19E-28 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD13_04915 445f1b0a2ca5d64761d6291022b17598 561 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 521 1.9E-209 T 17-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 BJD13_10005 93f77d3b34277a95e18f8ef832370517 525 Pfam PF13180 PDZ domain 313 403 6.4E-17 T 17-10-2018 IPR001478 PDZ domain GO:0005515 BJD13_10005 93f77d3b34277a95e18f8ef832370517 525 PRINTS PR00834 HtrA/DegQ protease family signature 352 364 3.6E-50 T 17-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BJD13_10005 93f77d3b34277a95e18f8ef832370517 525 PRINTS PR00834 HtrA/DegQ protease family signature 244 261 3.6E-50 T 17-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BJD13_10005 93f77d3b34277a95e18f8ef832370517 525 PRINTS PR00834 HtrA/DegQ protease family signature 208 232 3.6E-50 T 17-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BJD13_10005 93f77d3b34277a95e18f8ef832370517 525 PRINTS PR00834 HtrA/DegQ protease family signature 147 159 3.6E-50 T 17-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BJD13_10005 93f77d3b34277a95e18f8ef832370517 525 PRINTS PR00834 HtrA/DegQ protease family signature 168 188 3.6E-50 T 17-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BJD13_10005 93f77d3b34277a95e18f8ef832370517 525 PRINTS PR00834 HtrA/DegQ protease family signature 266 283 3.6E-50 T 17-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BJD13_10005 93f77d3b34277a95e18f8ef832370517 525 SUPERFAMILY SSF50494 51 303 1.13E-64 T 17-10-2018 IPR009003 Peptidase S1, PA clan BJD13_10005 93f77d3b34277a95e18f8ef832370517 525 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 53 520 2.5E-149 T 17-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 BJD13_10005 93f77d3b34277a95e18f8ef832370517 525 SUPERFAMILY SSF50156 432 522 1.45E-6 T 17-10-2018 IPR036034 PDZ superfamily GO:0005515 BJD13_10005 93f77d3b34277a95e18f8ef832370517 525 Gene3D G3DSA:2.30.42.10 431 525 2.3E-9 T 17-10-2018 BJD13_10005 93f77d3b34277a95e18f8ef832370517 525 Gene3D G3DSA:2.30.42.10 307 411 4.0E-26 T 17-10-2018 BJD13_10005 93f77d3b34277a95e18f8ef832370517 525 SUPERFAMILY SSF50156 270 395 1.58E-23 T 17-10-2018 IPR036034 PDZ superfamily GO:0005515 BJD13_10005 93f77d3b34277a95e18f8ef832370517 525 Gene3D G3DSA:2.40.10.120 52 305 1.8E-79 T 17-10-2018 BJD13_10005 93f77d3b34277a95e18f8ef832370517 525 SMART SM00228 431 514 7.7 T 17-10-2018 IPR001478 PDZ domain GO:0005515 BJD13_10005 93f77d3b34277a95e18f8ef832370517 525 SMART SM00228 312 394 5.7E-12 T 17-10-2018 IPR001478 PDZ domain GO:0005515 BJD13_10005 93f77d3b34277a95e18f8ef832370517 525 Pfam PF13365 Trypsin-like peptidase domain 138 273 7.3E-38 T 17-10-2018 BJD13_05835 3f7716c6b314c4992aa9cbaacd4e4c1e 819 SUPERFAMILY SSF52172 686 806 1.42E-6 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_05835 3f7716c6b314c4992aa9cbaacd4e4c1e 819 SMART SM00387 554 669 5.5E-36 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_05835 3f7716c6b314c4992aa9cbaacd4e4c1e 819 Gene3D G3DSA:3.30.565.10 514 672 1.2E-40 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_05835 3f7716c6b314c4992aa9cbaacd4e4c1e 819 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 555 668 1.0E-21 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_05835 3f7716c6b314c4992aa9cbaacd4e4c1e 819 SUPERFAMILY SSF47384 437 512 9.61E-8 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD13_05835 3f7716c6b314c4992aa9cbaacd4e4c1e 819 SUPERFAMILY SSF55874 504 667 1.05E-38 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_05835 3f7716c6b314c4992aa9cbaacd4e4c1e 819 Gene3D G3DSA:1.10.287.130 439 511 3.0E-13 T 17-10-2018 BJD13_05835 3f7716c6b314c4992aa9cbaacd4e4c1e 819 PRINTS PR00344 Bacterial sensor protein C-terminal signature 600 614 3.6E-17 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_05835 3f7716c6b314c4992aa9cbaacd4e4c1e 819 PRINTS PR00344 Bacterial sensor protein C-terminal signature 618 628 3.6E-17 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_05835 3f7716c6b314c4992aa9cbaacd4e4c1e 819 PRINTS PR00344 Bacterial sensor protein C-terminal signature 653 666 3.6E-17 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_05835 3f7716c6b314c4992aa9cbaacd4e4c1e 819 PRINTS PR00344 Bacterial sensor protein C-terminal signature 629 647 3.6E-17 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_18890 353b8e023f534d648660c3ee9a7e371d 711 Pfam PF13307 Helicase C-terminal domain 548 704 3.5E-31 T 17-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 BJD13_18890 353b8e023f534d648660c3ee9a7e371d 711 SUPERFAMILY SSF52540 59 686 1.38E-15 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_18890 353b8e023f534d648660c3ee9a7e371d 711 SMART SM00491 560 691 7.1E-29 T 17-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 BJD13_18890 353b8e023f534d648660c3ee9a7e371d 711 Hamap MF_02205 ATP-dependent DNA helicase DinG [dinG]. 51 710 33.553 T 17-10-2018 IPR039000 ATP-dependent DNA helicase DinG GO:0004003 BJD13_18890 353b8e023f534d648660c3ee9a7e371d 711 Gene3D G3DSA:3.40.50.300 42 315 2.3E-32 T 17-10-2018 BJD13_18890 353b8e023f534d648660c3ee9a7e371d 711 Gene3D G3DSA:3.40.50.300 525 708 1.8E-28 T 17-10-2018 BJD13_11490 ac86f1e142199991f71f6052ec364f9b 208 Gene3D G3DSA:3.90.226.10 2 203 1.4E-83 T 17-10-2018 BJD13_11490 ac86f1e142199991f71f6052ec364f9b 208 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 9 199 6.0E-106 T 17-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BJD13_11490 ac86f1e142199991f71f6052ec364f9b 208 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 119 132 - T 17-10-2018 IPR033135 ClpP, histidine active site BJD13_11490 ac86f1e142199991f71f6052ec364f9b 208 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 10 200 44.124 T 17-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BJD13_11490 ac86f1e142199991f71f6052ec364f9b 208 PRINTS PR00127 Clp protease catalytic subunit P signature 26 41 4.0E-52 T 17-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BJD13_11490 ac86f1e142199991f71f6052ec364f9b 208 PRINTS PR00127 Clp protease catalytic subunit P signature 175 194 4.0E-52 T 17-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BJD13_11490 ac86f1e142199991f71f6052ec364f9b 208 PRINTS PR00127 Clp protease catalytic subunit P signature 66 86 4.0E-52 T 17-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BJD13_11490 ac86f1e142199991f71f6052ec364f9b 208 PRINTS PR00127 Clp protease catalytic subunit P signature 97 114 4.0E-52 T 17-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BJD13_11490 ac86f1e142199991f71f6052ec364f9b 208 PRINTS PR00127 Clp protease catalytic subunit P signature 118 137 4.0E-52 T 17-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BJD13_11490 ac86f1e142199991f71f6052ec364f9b 208 Pfam PF00574 Clp protease 19 199 5.9E-87 T 17-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA BJD13_11490 ac86f1e142199991f71f6052ec364f9b 208 SUPERFAMILY SSF52096 10 199 1.03E-72 T 17-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BJD13_11490 ac86f1e142199991f71f6052ec364f9b 208 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 97 108 - T 17-10-2018 IPR018215 ClpP, Ser active site BJD13_04335 c29833373033aa4c75930db8c67f590c 363 SUPERFAMILY SSF53098 13 192 7.84E-56 T 17-10-2018 IPR012337 Ribonuclease H-like superfamily BJD13_04335 c29833373033aa4c75930db8c67f590c 363 SUPERFAMILY SSF47819 293 360 2.09E-11 T 17-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 BJD13_04335 c29833373033aa4c75930db8c67f590c 363 SUPERFAMILY SSF47819 193 282 2.15E-15 T 17-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 BJD13_04335 c29833373033aa4c75930db8c67f590c 363 Gene3D G3DSA:3.30.420.10 4 190 8.6E-57 T 17-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BJD13_04335 c29833373033aa4c75930db8c67f590c 363 TIGRFAM TIGR01388 rnd: ribonuclease D 4 358 5.2E-118 T 17-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 BJD13_04335 c29833373033aa4c75930db8c67f590c 363 Pfam PF00570 HRDC domain 213 258 2.6E-5 T 17-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 BJD13_04335 c29833373033aa4c75930db8c67f590c 363 Hamap MF_01899 Ribonuclease D [rnd]. 2 359 36.847 T 17-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 BJD13_04335 c29833373033aa4c75930db8c67f590c 363 SMART SM00474 2 169 6.2E-32 T 17-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 BJD13_04335 c29833373033aa4c75930db8c67f590c 363 Gene3D G3DSA:1.10.150.80 196 287 6.0E-10 T 17-10-2018 BJD13_04335 c29833373033aa4c75930db8c67f590c 363 Pfam PF01612 3'-5' exonuclease 10 168 2.8E-28 T 17-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 BJD13_17810 4dc8f4ae39be48639f4b63b224e22b34 731 PIRSF PIRSF029900 16 731 0.0 T 17-10-2018 IPR011395 Alpha glucuronidase GO:0005576|GO:0045493|GO:0046559 BJD13_17810 4dc8f4ae39be48639f4b63b224e22b34 731 Pfam PF07477 Glycosyl hydrolase family 67 C-terminus 484 707 5.2E-97 T 17-10-2018 IPR011099 Glycosyl hydrolase family 67, C-terminal GO:0005576|GO:0045493|GO:0046559 BJD13_17810 4dc8f4ae39be48639f4b63b224e22b34 731 Gene3D G3DSA:3.20.20.80 175 503 1.5E-156 T 17-10-2018 BJD13_17810 4dc8f4ae39be48639f4b63b224e22b34 731 SUPERFAMILY SSF51445 177 730 1.68E-250 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily BJD13_17810 4dc8f4ae39be48639f4b63b224e22b34 731 Pfam PF03648 Glycosyl hydrolase family 67 N-terminus 40 155 6.8E-26 T 17-10-2018 IPR005154 Alpha glucuronidase, N-terminal GO:0045493|GO:0046559 BJD13_17810 4dc8f4ae39be48639f4b63b224e22b34 731 Gene3D G3DSA:3.90.1330.10 505 730 7.6E-94 T 17-10-2018 IPR037054 Alpha-glucuronidase, C-terminal domain superfamily GO:0005576|GO:0045493|GO:0046559 BJD13_17810 4dc8f4ae39be48639f4b63b224e22b34 731 Pfam PF07488 Glycosyl hydrolase family 67 middle domain 159 482 2.5E-150 T 17-10-2018 IPR011100 Glycosyl hydrolase family 67, catalytic domain GO:0005576|GO:0045493|GO:0046559 BJD13_17810 4dc8f4ae39be48639f4b63b224e22b34 731 Gene3D G3DSA:3.30.379.10 48 172 4.2E-32 T 17-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 BJD13_17810 4dc8f4ae39be48639f4b63b224e22b34 731 SUPERFAMILY SSF55545 35 175 9.21E-38 T 17-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 BJD13_00660 06fffc99eda1dc65e07706fabddf2784 794 Gene3D G3DSA:1.10.8.730 474 588 7.4E-41 T 17-10-2018 BJD13_00660 06fffc99eda1dc65e07706fabddf2784 794 TIGRFAM TIGR02746 TraC-F-type: type-IV secretion system protein TraC 2 779 2.3E-190 T 17-10-2018 IPR014117 Type-IV secretion system protein TraC BJD13_00660 06fffc99eda1dc65e07706fabddf2784 794 Gene3D G3DSA:3.40.50.300 410 704 7.4E-41 T 17-10-2018 BJD13_00660 06fffc99eda1dc65e07706fabddf2784 794 SUPERFAMILY SSF52540 375 691 5.43E-41 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_00660 06fffc99eda1dc65e07706fabddf2784 794 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 3 226 1.6E-41 T 17-10-2018 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase BJD13_00660 06fffc99eda1dc65e07706fabddf2784 794 Pfam PF12846 AAA-like domain 422 670 1.7E-9 T 17-10-2018 BJD13_22050 328f8eda8ca512c292152c7c08a19338 923 Gene3D G3DSA:1.25.40.10 486 839 3.9E-29 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_22050 328f8eda8ca512c292152c7c08a19338 923 SMART SM00421 846 903 5.1E-22 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_22050 328f8eda8ca512c292152c7c08a19338 923 SMART SM00382 53 205 0.0053 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_22050 328f8eda8ca512c292152c7c08a19338 923 Gene3D G3DSA:1.10.10.10 841 911 1.1E-22 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_22050 328f8eda8ca512c292152c7c08a19338 923 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 849 863 7.3E-12 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_22050 328f8eda8ca512c292152c7c08a19338 923 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 863 879 7.3E-12 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_22050 328f8eda8ca512c292152c7c08a19338 923 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 879 891 7.3E-12 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_22050 328f8eda8ca512c292152c7c08a19338 923 SUPERFAMILY SSF48452 508 626 2.21E-12 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_22050 328f8eda8ca512c292152c7c08a19338 923 SMART SM00028 593 626 9.7 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD13_22050 328f8eda8ca512c292152c7c08a19338 923 SMART SM00028 551 584 5.6 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD13_22050 328f8eda8ca512c292152c7c08a19338 923 SMART SM00028 761 794 59.0 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD13_22050 328f8eda8ca512c292152c7c08a19338 923 SUPERFAMILY SSF52540 43 244 5.77E-10 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_22050 328f8eda8ca512c292152c7c08a19338 923 Pfam PF00196 Bacterial regulatory proteins, luxR family 848 899 4.3E-19 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_22050 328f8eda8ca512c292152c7c08a19338 923 SUPERFAMILY SSF46894 841 909 5.78E-20 T 17-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BJD13_22050 328f8eda8ca512c292152c7c08a19338 923 Pfam PF13424 Tetratricopeptide repeat 553 625 3.1E-10 T 17-10-2018 BJD13_22050 328f8eda8ca512c292152c7c08a19338 923 Gene3D G3DSA:3.40.50.300 30 187 2.9E-8 T 17-10-2018 BJD13_22050 328f8eda8ca512c292152c7c08a19338 923 ProSitePatterns PS00622 LuxR-type HTH domain signature. 863 890 - T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_02290 3563873ce4539cf536bb03126d8aa415 718 SMART SM00304 586 639 120.0 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_02290 3563873ce4539cf536bb03126d8aa415 718 SMART SM00304 284 337 35.0 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_02290 3563873ce4539cf536bb03126d8aa415 718 SMART SM00304 100 157 5.7 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_02290 3563873ce4539cf536bb03126d8aa415 718 SMART SM00304 373 425 3.4E-5 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_02290 3563873ce4539cf536bb03126d8aa415 718 SMART SM00304 194 247 27.0 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_02290 3563873ce4539cf536bb03126d8aa415 718 SMART SM00283 426 659 1.3E-67 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD13_02290 3563873ce4539cf536bb03126d8aa415 718 SUPERFAMILY SSF58104 393 660 3.4E-62 T 17-10-2018 BJD13_02290 3563873ce4539cf536bb03126d8aa415 718 Gene3D G3DSA:1.10.287.950 377 661 1.3E-70 T 17-10-2018 BJD13_02290 3563873ce4539cf536bb03126d8aa415 718 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 486 626 7.3E-32 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD13_02290 3563873ce4539cf536bb03126d8aa415 718 Gene3D G3DSA:1.20.120.1530 51 196 1.7E-47 T 17-10-2018 BJD13_02290 3563873ce4539cf536bb03126d8aa415 718 Gene3D G3DSA:1.20.120.1530 197 286 1.4E-42 T 17-10-2018 BJD13_02290 3563873ce4539cf536bb03126d8aa415 718 Gene3D G3DSA:1.20.120.1530 287 376 1.0E-40 T 17-10-2018 BJD13_12985 c42933f59ac6df3be0ef422e8cb8c50c 154 Gene3D G3DSA:3.40.50.960 1 153 2.9E-56 T 17-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BJD13_12985 c42933f59ac6df3be0ef422e8cb8c50c 154 SUPERFAMILY SSF52121 4 153 2.09E-53 T 17-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BJD13_12985 c42933f59ac6df3be0ef422e8cb8c50c 154 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 150 5.7E-52 T 17-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BJD13_12985 c42933f59ac6df3be0ef422e8cb8c50c 154 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 153 28.438 T 17-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BJD13_12985 c42933f59ac6df3be0ef422e8cb8c50c 154 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 149 4.2E-43 T 17-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BJD13_20890 b0bef523c3d60bd6f9a5be902b3d8d9b 100 ProSitePatterns PS00605 ATP synthase c subunit signature. 47 68 - T 17-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD13_20890 b0bef523c3d60bd6f9a5be902b3d8d9b 100 Hamap MF_01396 ATP synthase subunit c [atpH]. 17 82 13.72 T 17-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD13_20890 b0bef523c3d60bd6f9a5be902b3d8d9b 100 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 27 84 7.0E-23 T 17-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 BJD13_20890 b0bef523c3d60bd6f9a5be902b3d8d9b 100 Pfam PF00137 ATP synthase subunit C 18 80 3.8E-8 T 17-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 BJD13_20890 b0bef523c3d60bd6f9a5be902b3d8d9b 100 Gene3D G3DSA:1.20.20.10 9 85 9.4E-25 T 17-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD13_20890 b0bef523c3d60bd6f9a5be902b3d8d9b 100 SUPERFAMILY SSF81333 12 86 3.27E-17 T 17-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily BJD13_01245 323927d8984818a36ad0b201ae940c0f 77 Pfam PF12703 Toxin of toxin-antitoxin type 1 system 1 75 5.0E-39 T 17-10-2018 IPR024640 Toxin-antitoxin type 1 system, toxin component BJD13_01105 323927d8984818a36ad0b201ae940c0f 77 Pfam PF12703 Toxin of toxin-antitoxin type 1 system 1 75 5.0E-39 T 17-10-2018 IPR024640 Toxin-antitoxin type 1 system, toxin component BJD13_22730 3906b14674be286d57909ce51bf93eab 285 Pfam PF00535 Glycosyl transferase family 2 5 153 1.4E-30 T 17-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BJD13_22730 3906b14674be286d57909ce51bf93eab 285 SUPERFAMILY SSF53448 3 251 5.63E-39 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD13_22730 3906b14674be286d57909ce51bf93eab 285 Gene3D G3DSA:3.90.550.10 1 218 6.4E-45 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD13_03155 c6ff9ad2b6c8867cb35cef43ae2e98f9 444 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 356 367 - T 17-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_03155 c6ff9ad2b6c8867cb35cef43ae2e98f9 444 Gene3D G3DSA:3.10.20.600 246 340 1.7E-27 T 17-10-2018 BJD13_03155 c6ff9ad2b6c8867cb35cef43ae2e98f9 444 SUPERFAMILY SSF142019 19 252 3.27E-78 T 17-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_03155 c6ff9ad2b6c8867cb35cef43ae2e98f9 444 Gene3D G3DSA:3.40.50.11540 67 244 7.4E-74 T 17-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_03155 c6ff9ad2b6c8867cb35cef43ae2e98f9 444 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 62 233 2.1E-42 T 17-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_03155 c6ff9ad2b6c8867cb35cef43ae2e98f9 444 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 21 429 4.4E-198 T 17-10-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_03155 c6ff9ad2b6c8867cb35cef43ae2e98f9 444 SUPERFAMILY SSF142984 255 338 5.36E-22 T 17-10-2018 BJD13_03155 c6ff9ad2b6c8867cb35cef43ae2e98f9 444 Pfam PF10531 SLBB domain 257 305 6.5E-11 T 17-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_03155 c6ff9ad2b6c8867cb35cef43ae2e98f9 444 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 181 196 - T 17-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_03155 c6ff9ad2b6c8867cb35cef43ae2e98f9 444 SUPERFAMILY SSF140490 339 437 4.71E-35 T 17-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_03155 c6ff9ad2b6c8867cb35cef43ae2e98f9 444 Gene3D G3DSA:1.20.1440.230 342 439 1.9E-33 T 17-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_03155 c6ff9ad2b6c8867cb35cef43ae2e98f9 444 SMART SM00928 343 388 4.4E-26 T 17-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_03155 c6ff9ad2b6c8867cb35cef43ae2e98f9 444 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 346 426 6.9E-30 T 17-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_14460 e7c609c3b13f31bb194ce6ae38ae177e 230 Gene3D G3DSA:2.60.120.10 25 158 4.9E-53 T 17-10-2018 IPR014710 RmlC-like jelly roll fold BJD13_14460 e7c609c3b13f31bb194ce6ae38ae177e 230 Pfam PF00027 Cyclic nucleotide-binding domain 36 124 3.7E-19 T 17-10-2018 IPR000595 Cyclic nucleotide-binding domain BJD13_14460 e7c609c3b13f31bb194ce6ae38ae177e 230 Gene3D G3DSA:1.10.10.10 159 227 9.3E-35 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_14460 e7c609c3b13f31bb194ce6ae38ae177e 230 Pfam PF00325 Bacterial regulatory proteins, crp family 186 217 8.4E-14 T 17-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 BJD13_14460 e7c609c3b13f31bb194ce6ae38ae177e 230 SUPERFAMILY SSF46785 159 227 6.74E-13 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_14460 e7c609c3b13f31bb194ce6ae38ae177e 230 ProSitePatterns PS00042 Crp-type HTH domain signature. 188 211 - T 17-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 BJD13_14460 e7c609c3b13f31bb194ce6ae38ae177e 230 SUPERFAMILY SSF51206 24 155 2.23E-24 T 17-10-2018 IPR018490 Cyclic nucleotide-binding-like BJD13_14460 e7c609c3b13f31bb194ce6ae38ae177e 230 SMART SM00100 18 137 6.5E-22 T 17-10-2018 IPR000595 Cyclic nucleotide-binding domain BJD13_14460 e7c609c3b13f31bb194ce6ae38ae177e 230 SMART SM00419 180 228 2.5E-12 T 17-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 BJD13_14460 e7c609c3b13f31bb194ce6ae38ae177e 230 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 186 202 2.5E-6 T 17-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 BJD13_14460 e7c609c3b13f31bb194ce6ae38ae177e 230 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 202 217 2.5E-6 T 17-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 BJD13_04945 9b47bb5ff1bc537e0f1692436e1309a2 297 Pfam PF00483 Nucleotidyl transferase 12 268 1.7E-30 T 17-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 BJD13_04945 9b47bb5ff1bc537e0f1692436e1309a2 297 Gene3D G3DSA:3.90.550.10 1 293 5.9E-84 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD13_04945 9b47bb5ff1bc537e0f1692436e1309a2 297 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 5 267 8.6E-107 T 17-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 BJD13_04945 9b47bb5ff1bc537e0f1692436e1309a2 297 SUPERFAMILY SSF53448 5 279 3.15E-63 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD13_15385 e71c548368160d9244756029f9768fbb 1049 Gene3D G3DSA:1.20.1640.10 519 1024 0.0 T 17-10-2018 BJD13_15385 e71c548368160d9244756029f9768fbb 1049 SUPERFAMILY SSF82714 724 806 6.41E-19 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_15385 e71c548368160d9244756029f9768fbb 1049 SUPERFAMILY SSF82693 136 331 1.03E-24 T 17-10-2018 BJD13_15385 e71c548368160d9244756029f9768fbb 1049 SUPERFAMILY SSF82866 297 498 2.75E-53 T 17-10-2018 BJD13_15385 e71c548368160d9244756029f9768fbb 1049 SUPERFAMILY SSF82693 38 131 2.09E-26 T 17-10-2018 BJD13_15385 e71c548368160d9244756029f9768fbb 1049 Gene3D G3DSA:3.30.70.1430 573 670 0.0 T 17-10-2018 BJD13_15385 e71c548368160d9244756029f9768fbb 1049 SUPERFAMILY SSF82714 183 272 6.54E-20 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_15385 e71c548368160d9244756029f9768fbb 1049 Gene3D G3DSA:3.30.2090.10 180 276 0.0 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_15385 e71c548368160d9244756029f9768fbb 1049 SUPERFAMILY SSF82866 838 1026 2.22E-41 T 17-10-2018 BJD13_15385 e71c548368160d9244756029f9768fbb 1049 SUPERFAMILY SSF82693 571 673 1.31E-29 T 17-10-2018 BJD13_15385 e71c548368160d9244756029f9768fbb 1049 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 9.6E-109 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_15385 e71c548368160d9244756029f9768fbb 1049 PRINTS PR00702 Acriflavin resistance protein family signature 558 575 9.6E-109 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_15385 e71c548368160d9244756029f9768fbb 1049 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 9.6E-109 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_15385 e71c548368160d9244756029f9768fbb 1049 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 9.6E-109 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_15385 e71c548368160d9244756029f9768fbb 1049 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 9.6E-109 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_15385 e71c548368160d9244756029f9768fbb 1049 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 9.6E-109 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_15385 e71c548368160d9244756029f9768fbb 1049 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 9.6E-109 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_15385 e71c548368160d9244756029f9768fbb 1049 PRINTS PR00702 Acriflavin resistance protein family signature 625 639 9.6E-109 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_15385 e71c548368160d9244756029f9768fbb 1049 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 9.6E-109 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_15385 e71c548368160d9244756029f9768fbb 1049 Gene3D G3DSA:1.20.1640.10 8 518 0.0 T 17-10-2018 BJD13_15385 e71c548368160d9244756029f9768fbb 1049 Gene3D G3DSA:3.30.70.1430 38 819 0.0 T 17-10-2018 BJD13_15385 e71c548368160d9244756029f9768fbb 1049 Gene3D G3DSA:3.30.70.1440 671 867 0.0 T 17-10-2018 BJD13_15385 e71c548368160d9244756029f9768fbb 1049 Gene3D G3DSA:3.30.2090.10 723 811 0.0 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_15385 e71c548368160d9244756029f9768fbb 1049 SUPERFAMILY SSF82693 674 858 5.75E-21 T 17-10-2018 BJD13_15385 e71c548368160d9244756029f9768fbb 1049 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1045 0.0 T 17-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 BJD13_15385 e71c548368160d9244756029f9768fbb 1049 Gene3D G3DSA:3.30.70.1320 133 333 0.0 T 17-10-2018 BJD13_15385 e71c548368160d9244756029f9768fbb 1049 Pfam PF00873 AcrB/AcrD/AcrF family 1 1028 0.0 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_04170 c2fd736862da33246006e553da62d879 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 270 2.8E-17 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD13_04170 c2fd736862da33246006e553da62d879 282 Gene3D G3DSA:1.10.3720.10 16 269 1.3E-49 T 17-10-2018 IPR035906 MetI-like superfamily BJD13_04170 c2fd736862da33246006e553da62d879 282 SUPERFAMILY SSF161098 5 266 4.77E-52 T 17-10-2018 IPR035906 MetI-like superfamily BJD13_07805 27c42acd0a7760f14f2aa01ba91c41d4 160 Gene3D G3DSA:3.40.30.10 1 160 2.0E-47 T 17-10-2018 BJD13_07805 27c42acd0a7760f14f2aa01ba91c41d4 160 Pfam PF00578 AhpC/TSA family 10 135 9.5E-31 T 17-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 BJD13_07805 27c42acd0a7760f14f2aa01ba91c41d4 160 SUPERFAMILY SSF52833 14 157 3.94E-44 T 17-10-2018 IPR036249 Thioredoxin-like superfamily BJD13_20895 d4012455ee1eb5ae6916ecec0ea00c3d 156 Gene3D G3DSA:1.20.5.620 62 122 1.4E-11 T 17-10-2018 BJD13_20895 d4012455ee1eb5ae6916ecec0ea00c3d 156 SUPERFAMILY SSF81573 62 121 4.32E-12 T 17-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily BJD13_20895 d4012455ee1eb5ae6916ecec0ea00c3d 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 155 1.2E-39 T 17-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 BJD13_20895 d4012455ee1eb5ae6916ecec0ea00c3d 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 136 1.1E-28 T 17-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 BJD13_20895 d4012455ee1eb5ae6916ecec0ea00c3d 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 12.518 T 17-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 BJD13_06660 2507c55e8be6249b2a6dad776c8f3a6b 376 Gene3D G3DSA:3.40.1690.10 218 355 2.9E-56 T 17-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal BJD13_06660 2507c55e8be6249b2a6dad776c8f3a6b 376 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 9 354 1.3E-135 T 17-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 BJD13_06660 2507c55e8be6249b2a6dad776c8f3a6b 376 SUPERFAMILY SSF160544 245 352 7.85E-40 T 17-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal BJD13_06660 2507c55e8be6249b2a6dad776c8f3a6b 376 Pfam PF01312 FlhB HrpN YscU SpaS Family 8 348 7.3E-121 T 17-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BJD13_06660 2507c55e8be6249b2a6dad776c8f3a6b 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 209 227 1.0E-37 T 17-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BJD13_06660 2507c55e8be6249b2a6dad776c8f3a6b 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 273 288 1.0E-37 T 17-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BJD13_06660 2507c55e8be6249b2a6dad776c8f3a6b 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 11 33 1.0E-37 T 17-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BJD13_06660 2507c55e8be6249b2a6dad776c8f3a6b 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 229 246 1.0E-37 T 17-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BJD13_06660 2507c55e8be6249b2a6dad776c8f3a6b 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 303 324 1.0E-37 T 17-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BJD13_03705 14f10a7f711180d64cb37a7dd5dd4f6e 91 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 7.1E-40 T 17-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 BJD13_03705 14f10a7f711180d64cb37a7dd5dd4f6e 91 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 28.283 T 17-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 BJD13_03705 14f10a7f711180d64cb37a7dd5dd4f6e 91 SUPERFAMILY SSF111148 1 88 1.2E-36 T 17-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 BJD13_03705 14f10a7f711180d64cb37a7dd5dd4f6e 91 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 77 1.0E-40 T 17-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 BJD13_03705 14f10a7f711180d64cb37a7dd5dd4f6e 91 PIRSF PIRSF029827 1 90 9.4E-41 T 17-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 BJD13_03705 14f10a7f711180d64cb37a7dd5dd4f6e 91 Gene3D G3DSA:1.10.3880.10 1 90 1.3E-34 T 17-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 BJD13_10730 9b7fe744ce33b567aed297ef5d746045 201 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 114 124 1.4E-10 T 17-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 BJD13_10730 9b7fe744ce33b567aed297ef5d746045 201 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 125 136 1.4E-10 T 17-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 BJD13_10730 9b7fe744ce33b567aed297ef5d746045 201 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 153 165 1.4E-10 T 17-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 BJD13_10730 9b7fe744ce33b567aed297ef5d746045 201 Pfam PF00717 Peptidase S24-like 117 182 2.6E-15 T 17-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C BJD13_10730 9b7fe744ce33b567aed297ef5d746045 201 SUPERFAMILY SSF51306 78 199 5.76E-33 T 17-10-2018 IPR036286 LexA/Signal peptidase-like superfamily BJD13_10730 9b7fe744ce33b567aed297ef5d746045 201 SUPERFAMILY SSF46785 3 68 1.05E-12 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_10730 9b7fe744ce33b567aed297ef5d746045 201 Hamap MF_00015 LexA repressor [lexA]. 3 201 27.718 T 17-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 BJD13_10730 9b7fe744ce33b567aed297ef5d746045 201 Gene3D G3DSA:1.10.10.10 1 68 1.2E-17 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_10730 9b7fe744ce33b567aed297ef5d746045 201 TIGRFAM TIGR00498 lexA: repressor LexA 7 200 6.3E-51 T 17-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 BJD13_10730 9b7fe744ce33b567aed297ef5d746045 201 Pfam PF01726 LexA DNA binding domain 3 64 6.9E-12 T 17-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 BJD13_10730 9b7fe744ce33b567aed297ef5d746045 201 Gene3D G3DSA:2.10.109.10 83 201 1.7E-36 T 17-10-2018 BJD13_20500 b51dfff3ca9b29c038a9ae3abfb8be62 427 Gene3D G3DSA:3.40.50.2300 1 120 5.2E-18 T 17-10-2018 BJD13_20500 b51dfff3ca9b29c038a9ae3abfb8be62 427 Pfam PF00072 Response regulator receiver domain 8 112 2.1E-15 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_20500 b51dfff3ca9b29c038a9ae3abfb8be62 427 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 151 164 - T 17-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BJD13_20500 b51dfff3ca9b29c038a9ae3abfb8be62 427 Gene3D G3DSA:3.40.50.300 121 294 2.0E-56 T 17-10-2018 BJD13_20500 b51dfff3ca9b29c038a9ae3abfb8be62 427 SUPERFAMILY SSF46689 374 422 4.24E-7 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_20500 b51dfff3ca9b29c038a9ae3abfb8be62 427 Gene3D G3DSA:1.10.10.60 365 427 1.5E-10 T 17-10-2018 BJD13_20500 b51dfff3ca9b29c038a9ae3abfb8be62 427 Pfam PF02954 Bacterial regulatory protein, Fis family 384 421 2.4E-12 T 17-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD13_20500 b51dfff3ca9b29c038a9ae3abfb8be62 427 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 212 227 - T 17-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BJD13_20500 b51dfff3ca9b29c038a9ae3abfb8be62 427 Pfam PF00158 Sigma-54 interaction domain 127 291 4.3E-61 T 17-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 BJD13_20500 b51dfff3ca9b29c038a9ae3abfb8be62 427 SMART SM00448 4 114 7.2E-18 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_20500 b51dfff3ca9b29c038a9ae3abfb8be62 427 SUPERFAMILY SSF52172 1 172 5.27E-26 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_20500 b51dfff3ca9b29c038a9ae3abfb8be62 427 SMART SM00382 147 287 1.7E-8 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_20500 b51dfff3ca9b29c038a9ae3abfb8be62 427 SUPERFAMILY SSF52540 126 366 5.89E-58 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_20500 b51dfff3ca9b29c038a9ae3abfb8be62 427 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 407 427 5.2E-7 T 17-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD13_20500 b51dfff3ca9b29c038a9ae3abfb8be62 427 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 390 407 5.2E-7 T 17-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD13_20500 b51dfff3ca9b29c038a9ae3abfb8be62 427 Gene3D G3DSA:1.10.8.60 295 360 1.1E-11 T 17-10-2018 BJD13_05900 b1f5e3c8e5217bc7e167aebd054f9467 645 Gene3D G3DSA:2.40.50.230 356 458 5.9E-37 T 17-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily BJD13_05900 b1f5e3c8e5217bc7e167aebd054f9467 645 SUPERFAMILY SSF69279 187 365 8.67E-33 T 17-10-2018 BJD13_05900 b1f5e3c8e5217bc7e167aebd054f9467 645 Gene3D G3DSA:3.30.1920.30 223 287 3.3E-104 T 17-10-2018 BJD13_05900 b1f5e3c8e5217bc7e167aebd054f9467 645 SUPERFAMILY SSF69255 365 453 1.33E-27 T 17-10-2018 BJD13_05900 b1f5e3c8e5217bc7e167aebd054f9467 645 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 6 524 3.3E-174 T 17-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset BJD13_05900 b1f5e3c8e5217bc7e167aebd054f9467 645 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 18 506 1.5E-134 T 17-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein BJD13_05900 b1f5e3c8e5217bc7e167aebd054f9467 645 SUPERFAMILY SSF69349 443 642 2.28E-35 T 17-10-2018 BJD13_05900 b1f5e3c8e5217bc7e167aebd054f9467 645 Gene3D G3DSA:2.30.110.50 9 331 3.3E-104 T 17-10-2018 BJD13_05900 b1f5e3c8e5217bc7e167aebd054f9467 645 Pfam PF05954 Phage late control gene D protein (GPD) 23 327 1.3E-83 T 17-10-2018 BJD13_05900 b1f5e3c8e5217bc7e167aebd054f9467 645 Gene3D G3DSA:3.55.50.10 96 187 3.3E-104 T 17-10-2018 BJD13_05900 b1f5e3c8e5217bc7e167aebd054f9467 645 SUPERFAMILY SSF69279 11 183 2.17E-53 T 17-10-2018 BJD13_10085 86d01dafd69d2456a011507f93d03b4b 753 Gene3D G3DSA:1.10.287.950 396 697 2.2E-85 T 17-10-2018 BJD13_10085 86d01dafd69d2456a011507f93d03b4b 753 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 623 652 4.8E-58 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD13_10085 86d01dafd69d2456a011507f93d03b4b 753 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 469 498 4.8E-58 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD13_10085 86d01dafd69d2456a011507f93d03b4b 753 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 575 604 4.8E-58 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD13_10085 86d01dafd69d2456a011507f93d03b4b 753 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 546 573 4.8E-58 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD13_10085 86d01dafd69d2456a011507f93d03b4b 753 SMART SM00283 448 695 3.6E-91 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD13_10085 86d01dafd69d2456a011507f93d03b4b 753 SMART SM00304 214 266 5.0E-8 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_10085 86d01dafd69d2456a011507f93d03b4b 753 SMART SM00304 395 447 16.0 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_10085 86d01dafd69d2456a011507f93d03b4b 753 SMART SM00304 305 356 11.0 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_10085 86d01dafd69d2456a011507f93d03b4b 753 SUPERFAMILY SSF158472 214 264 4.05E-9 T 17-10-2018 BJD13_10085 86d01dafd69d2456a011507f93d03b4b 753 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 508 662 7.9E-53 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD13_10085 86d01dafd69d2456a011507f93d03b4b 753 Gene3D G3DSA:1.20.120.1530 206 352 9.1E-43 T 17-10-2018 BJD13_10085 86d01dafd69d2456a011507f93d03b4b 753 Pfam PF00672 HAMP domain 214 262 2.3E-7 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_10085 86d01dafd69d2456a011507f93d03b4b 753 Pfam PF12729 Four helix bundle sensory module for signal transduction 9 184 7.1E-16 T 17-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain BJD13_10085 86d01dafd69d2456a011507f93d03b4b 753 SUPERFAMILY SSF58104 415 700 2.22E-71 T 17-10-2018 BJD13_19645 5fbca4cf06a34385ce98691411cbf52f 470 Pfam PF12914 SH3 domain of SH3b2 type 218 265 3.9E-5 T 17-10-2018 IPR026864 SH3b2-type SH3 domain BJD13_19645 5fbca4cf06a34385ce98691411cbf52f 470 PIRSF PIRSF019015 3 464 1.1E-70 T 17-10-2018 IPR027017 Uncharacterised peptidase with NlpC/P60 domain, YkfC type BJD13_19645 5fbca4cf06a34385ce98691411cbf52f 470 Pfam PF12913 SH3 domain (SH3b1 type) 160 206 3.5E-17 T 17-10-2018 IPR039439 SH3b1 domain BJD13_19645 5fbca4cf06a34385ce98691411cbf52f 470 Pfam PF00877 NlpC/P60 family 326 432 3.8E-12 T 17-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain BJD13_19645 5fbca4cf06a34385ce98691411cbf52f 470 Gene3D G3DSA:3.90.1720.10 301 462 3.8E-31 T 17-10-2018 BJD13_19645 5fbca4cf06a34385ce98691411cbf52f 470 SUPERFAMILY SSF54001 310 419 6.38E-18 T 17-10-2018 IPR038765 Papain-like cysteine peptidase superfamily BJD13_04015 ae49c0d0b0b638bbfc1410b9936e4429 332 SUPERFAMILY SSF53822 58 312 2.54E-66 T 17-10-2018 IPR028082 Periplasmic binding protein-like I BJD13_04015 ae49c0d0b0b638bbfc1410b9936e4429 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 4.7E-15 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD13_04015 ae49c0d0b0b638bbfc1410b9936e4429 332 SMART SM00354 2 71 1.8E-26 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD13_04015 ae49c0d0b0b638bbfc1410b9936e4429 332 SUPERFAMILY SSF47413 3 59 2.25E-15 T 17-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BJD13_04015 ae49c0d0b0b638bbfc1410b9936e4429 332 Pfam PF13377 Periplasmic binding protein-like domain 167 324 2.2E-34 T 17-10-2018 BJD13_04015 ae49c0d0b0b638bbfc1410b9936e4429 332 Gene3D G3DSA:3.40.50.2300 159 321 2.8E-75 T 17-10-2018 BJD13_04015 ae49c0d0b0b638bbfc1410b9936e4429 332 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 17-10-2018 BJD13_04015 ae49c0d0b0b638bbfc1410b9936e4429 332 Gene3D G3DSA:3.40.50.2300 62 316 2.8E-75 T 17-10-2018 BJD13_04015 ae49c0d0b0b638bbfc1410b9936e4429 332 Gene3D G3DSA:1.10.260.40 2 58 8.1E-20 T 17-10-2018 BJD13_17545 8975b8b91caa091cdfe17ba7b210a2c5 414 Pfam PF01590 GAF domain 22 154 1.0E-7 T 17-10-2018 IPR003018 GAF domain GO:0005515 BJD13_17545 8975b8b91caa091cdfe17ba7b210a2c5 414 SMART SM00388 182 247 2.4E-5 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_17545 8975b8b91caa091cdfe17ba7b210a2c5 414 Gene3D G3DSA:3.30.565.10 256 397 4.7E-13 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_17545 8975b8b91caa091cdfe17ba7b210a2c5 414 Gene3D G3DSA:3.30.450.40 18 165 2.2E-13 T 17-10-2018 IPR029016 GAF-like domain superfamily BJD13_17545 8975b8b91caa091cdfe17ba7b210a2c5 414 SMART SM00065 16 163 1.9E-8 T 17-10-2018 IPR003018 GAF domain GO:0005515 BJD13_17545 8975b8b91caa091cdfe17ba7b210a2c5 414 Pfam PF00512 His Kinase A (phospho-acceptor) domain 183 243 3.3E-7 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_17545 8975b8b91caa091cdfe17ba7b210a2c5 414 Gene3D G3DSA:1.10.287.130 174 246 4.9E-9 T 17-10-2018 BJD13_17545 8975b8b91caa091cdfe17ba7b210a2c5 414 SUPERFAMILY SSF47384 175 243 1.28E-9 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD13_17545 8975b8b91caa091cdfe17ba7b210a2c5 414 SUPERFAMILY SSF55874 259 400 8.4E-13 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_17545 8975b8b91caa091cdfe17ba7b210a2c5 414 SUPERFAMILY SSF55781 23 161 3.93E-19 T 17-10-2018 BJD13_16270 179c372c1fbadff20882a73b121dc36c 540 Gene3D G3DSA:3.40.50.1820 39 532 1.5E-127 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_16270 179c372c1fbadff20882a73b121dc36c 540 Pfam PF00135 Carboxylesterase family 46 515 1.5E-87 T 17-10-2018 IPR002018 Carboxylesterase, type B BJD13_16270 179c372c1fbadff20882a73b121dc36c 540 SUPERFAMILY SSF53474 45 512 4.66E-101 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_16270 179c372c1fbadff20882a73b121dc36c 540 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 212 227 - T 17-10-2018 IPR019826 Carboxylesterase type B, active site BJD13_16270 179c372c1fbadff20882a73b121dc36c 540 ProSitePatterns PS00941 Carboxylesterases type-B signature 2. 112 122 - T 17-10-2018 IPR019819 Carboxylesterase type B, conserved site BJD13_20710 6b0713a2447f37e742afced4e23eb9c0 429 SUPERFAMILY SSF54373 270 360 9.55E-19 T 17-10-2018 BJD13_20710 6b0713a2447f37e742afced4e23eb9c0 429 Gene3D G3DSA:3.50.50.60 100 405 9.1E-53 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_20710 6b0713a2447f37e742afced4e23eb9c0 429 SUPERFAMILY SSF51905 1 418 1.01E-53 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_20710 6b0713a2447f37e742afced4e23eb9c0 429 Gene3D G3DSA:3.50.50.60 1 78 2.1E-10 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_20710 6b0713a2447f37e742afced4e23eb9c0 429 Pfam PF01266 FAD dependent oxidoreductase 3 398 7.4E-73 T 17-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 BJD13_20710 6b0713a2447f37e742afced4e23eb9c0 429 Gene3D G3DSA:3.30.9.10 134 362 9.1E-53 T 17-10-2018 BJD13_20710 6b0713a2447f37e742afced4e23eb9c0 429 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 411 49.258 T 17-10-2018 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 BJD13_14370 4bac60dab20654acef5a349e7d40e305 420 PIRSF PIRSF029171 1 420 2.5E-96 T 17-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 BJD13_14370 4bac60dab20654acef5a349e7d40e305 420 Pfam PF03583 Secretory lipase 132 207 9.9E-8 T 17-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 BJD13_14370 4bac60dab20654acef5a349e7d40e305 420 SUPERFAMILY SSF53474 129 387 2.81E-18 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_14370 4bac60dab20654acef5a349e7d40e305 420 Gene3D G3DSA:3.40.50.1820 338 420 6.3E-22 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_14370 4bac60dab20654acef5a349e7d40e305 420 Gene3D G3DSA:3.40.50.1820 30 248 1.6E-60 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_19300 a5c9e39cca0be193f6fbd990842d15d2 112 PIRSF PIRSF039144 1 112 3.7E-52 T 17-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BJD13_19300 a5c9e39cca0be193f6fbd990842d15d2 112 SUPERFAMILY SSF54913 1 112 1.75E-44 T 17-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta BJD13_19300 a5c9e39cca0be193f6fbd990842d15d2 112 PRINTS PR00340 P-II protein signature 23 41 1.3E-41 T 17-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BJD13_19300 a5c9e39cca0be193f6fbd990842d15d2 112 PRINTS PR00340 P-II protein signature 83 103 1.3E-41 T 17-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BJD13_19300 a5c9e39cca0be193f6fbd990842d15d2 112 PRINTS PR00340 P-II protein signature 52 75 1.3E-41 T 17-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BJD13_19300 a5c9e39cca0be193f6fbd990842d15d2 112 PRINTS PR00340 P-II protein signature 2 17 1.3E-41 T 17-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BJD13_19300 a5c9e39cca0be193f6fbd990842d15d2 112 SMART SM00938 4 105 3.0E-63 T 17-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BJD13_19300 a5c9e39cca0be193f6fbd990842d15d2 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 17-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 BJD13_19300 a5c9e39cca0be193f6fbd990842d15d2 112 Gene3D G3DSA:3.30.70.120 1 112 1.1E-43 T 17-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BJD13_19300 a5c9e39cca0be193f6fbd990842d15d2 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.0E-41 T 17-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BJD13_19300 a5c9e39cca0be193f6fbd990842d15d2 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 17-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 BJD13_20620 5a76e88080d464d0ad2a47fd402b799e 272 PIRSF PIRSF006157 1 262 4.5E-88 T 17-10-2018 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type GO:0008270|GO:0016701|GO:0055114 BJD13_20620 5a76e88080d464d0ad2a47fd402b799e 272 Gene3D G3DSA:3.40.830.10 1 261 5.5E-86 T 17-10-2018 BJD13_20620 5a76e88080d464d0ad2a47fd402b799e 272 SUPERFAMILY SSF53213 3 261 1.96E-87 T 17-10-2018 BJD13_20620 5a76e88080d464d0ad2a47fd402b799e 272 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 6 249 1.5E-46 T 17-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 BJD13_17155 570c09cd84197cb862a79b06b474ee2b 96 Gene3D G3DSA:3.30.750.24 1 83 2.0E-7 T 17-10-2018 IPR036513 STAS domain superfamily BJD13_17155 570c09cd84197cb862a79b06b474ee2b 96 Pfam PF13466 STAS domain 13 76 5.5E-11 T 17-10-2018 IPR002645 STAS domain BJD13_17155 570c09cd84197cb862a79b06b474ee2b 96 SUPERFAMILY SSF52091 11 73 2.75E-9 T 17-10-2018 IPR036513 STAS domain superfamily BJD13_08710 7ed7e71bf8d2a763db69c7a838162b9a 226 SUPERFAMILY SSF53056 1 204 7.72E-68 T 17-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 BJD13_08710 7ed7e71bf8d2a763db69c7a838162b9a 226 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 17-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 BJD13_08710 7ed7e71bf8d2a763db69c7a838162b9a 226 SMART SM00947 27 194 3.6E-68 T 17-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 BJD13_08710 7ed7e71bf8d2a763db69c7a838162b9a 226 Gene3D G3DSA:3.40.1050.10 1 202 2.4E-74 T 17-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 BJD13_08710 7ed7e71bf8d2a763db69c7a838162b9a 226 Pfam PF00484 Carbonic anhydrase 34 190 4.5E-53 T 17-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 BJD13_08710 7ed7e71bf8d2a763db69c7a838162b9a 226 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 39 46 - T 17-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 BJD13_15880 dd3b21f16a5f98aa7899e70a10e417ef 350 Pfam PF02661 Fic/DOC family 119 188 2.8E-15 T 17-10-2018 IPR003812 Fido domain BJD13_15880 dd3b21f16a5f98aa7899e70a10e417ef 350 Pfam PF13784 Fic/DOC family N-terminal 3 83 2.3E-23 T 17-10-2018 IPR025758 Fic/DOC N-terminal BJD13_15880 dd3b21f16a5f98aa7899e70a10e417ef 350 PIRSF PIRSF038925 1 335 2.3E-107 T 17-10-2018 IPR026287 Adenosine monophosphate-protein transferase BJD13_15880 dd3b21f16a5f98aa7899e70a10e417ef 350 SUPERFAMILY SSF140931 128 251 4.19E-30 T 17-10-2018 IPR036597 Fido-like domain superfamily BJD13_15880 dd3b21f16a5f98aa7899e70a10e417ef 350 SUPERFAMILY SSF46785 271 323 3.58E-5 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_15880 dd3b21f16a5f98aa7899e70a10e417ef 350 Gene3D G3DSA:1.10.3290.10 26 254 6.5E-35 T 17-10-2018 IPR036597 Fido-like domain superfamily BJD13_07950 35bc70ce63ea317160897a21cec668ef 101 Pfam PF01985 CRS1 / YhbY (CRM) domain 5 88 2.3E-21 T 17-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 BJD13_07950 35bc70ce63ea317160897a21cec668ef 101 Gene3D G3DSA:3.30.110.60 3 100 1.6E-32 T 17-10-2018 IPR035920 YhbY-like superfamily BJD13_07950 35bc70ce63ea317160897a21cec668ef 101 SUPERFAMILY SSF75471 4 98 9.94E-29 T 17-10-2018 IPR035920 YhbY-like superfamily BJD13_07950 35bc70ce63ea317160897a21cec668ef 101 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 5 100 1.2E-26 T 17-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 BJD13_07950 35bc70ce63ea317160897a21cec668ef 101 SMART SM01103 5 88 2.9E-38 T 17-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 BJD13_07950 35bc70ce63ea317160897a21cec668ef 101 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 11 100 1.0E-33 T 17-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 BJD13_03710 5885fc5740b7aaa10ddd8c3d6e321e4a 357 Gene3D G3DSA:1.10.1670.10 16 221 1.1E-81 T 17-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 BJD13_03710 5885fc5740b7aaa10ddd8c3d6e321e4a 357 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 13 286 2.0E-101 T 17-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 BJD13_03710 5885fc5740b7aaa10ddd8c3d6e321e4a 357 ProSitePatterns PS01155 Endonuclease III family signature. 109 138 - T 17-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 BJD13_03710 5885fc5740b7aaa10ddd8c3d6e321e4a 357 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 202 218 - T 17-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 BJD13_03710 5885fc5740b7aaa10ddd8c3d6e321e4a 357 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 43 173 2.2E-17 T 17-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 BJD13_03710 5885fc5740b7aaa10ddd8c3d6e321e4a 357 SUPERFAMILY SSF55811 230 357 6.77E-26 T 17-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BJD13_03710 5885fc5740b7aaa10ddd8c3d6e321e4a 357 Pfam PF00633 Helix-hairpin-helix motif 107 134 1.9E-7 T 17-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 BJD13_03710 5885fc5740b7aaa10ddd8c3d6e321e4a 357 Gene3D G3DSA:1.10.340.30 28 139 1.1E-81 T 17-10-2018 BJD13_03710 5885fc5740b7aaa10ddd8c3d6e321e4a 357 Gene3D G3DSA:3.90.79.10 242 357 7.1E-17 T 17-10-2018 BJD13_03710 5885fc5740b7aaa10ddd8c3d6e321e4a 357 SMART SM00478 46 200 1.3E-38 T 17-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 BJD13_03710 5885fc5740b7aaa10ddd8c3d6e321e4a 357 Pfam PF14815 NUDIX domain 245 356 2.9E-23 T 17-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 BJD13_03710 5885fc5740b7aaa10ddd8c3d6e321e4a 357 SUPERFAMILY SSF48150 11 234 1.88E-71 T 17-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 BJD13_09030 129b5037c4b2e3ecc4899b2270dd59c8 172 Gene3D G3DSA:2.30.22.10 114 170 4.9E-24 T 17-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 BJD13_09030 129b5037c4b2e3ecc4899b2270dd59c8 172 ProSitePatterns PS01071 grpE protein signature. 125 168 - T 17-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 BJD13_09030 129b5037c4b2e3ecc4899b2270dd59c8 172 SUPERFAMILY SSF58014 20 114 4.32E-22 T 17-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 BJD13_09030 129b5037c4b2e3ecc4899b2270dd59c8 172 PRINTS PR00773 GrpE protein signature 42 58 5.8E-24 T 17-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 BJD13_09030 129b5037c4b2e3ecc4899b2270dd59c8 172 PRINTS PR00773 GrpE protein signature 70 85 5.8E-24 T 17-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 BJD13_09030 129b5037c4b2e3ecc4899b2270dd59c8 172 PRINTS PR00773 GrpE protein signature 149 168 5.8E-24 T 17-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 BJD13_09030 129b5037c4b2e3ecc4899b2270dd59c8 172 PRINTS PR00773 GrpE protein signature 122 137 5.8E-24 T 17-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 BJD13_09030 129b5037c4b2e3ecc4899b2270dd59c8 172 SUPERFAMILY SSF51064 116 171 1.7E-18 T 17-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 BJD13_09030 129b5037c4b2e3ecc4899b2270dd59c8 172 Pfam PF01025 GrpE 12 170 5.1E-47 T 17-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 BJD13_09030 129b5037c4b2e3ecc4899b2270dd59c8 172 Gene3D G3DSA:3.90.20.20 2 112 4.4E-23 T 17-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 BJD13_09030 129b5037c4b2e3ecc4899b2270dd59c8 172 Hamap MF_01151 Protein GrpE [grpE]. 3 170 19.515 T 17-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 BJD13_18025 7c9f346aef7c7383b044f49e1553163a 1149 Pfam PF00072 Response regulator receiver domain 1031 1138 8.6E-11 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_18025 7c9f346aef7c7383b044f49e1553163a 1149 Gene3D G3DSA:1.10.287.130 770 851 2.0E-14 T 17-10-2018 BJD13_18025 7c9f346aef7c7383b044f49e1553163a 1149 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 636 759 1.0E-7 T 17-10-2018 IPR000014 PAS domain BJD13_18025 7c9f346aef7c7383b044f49e1553163a 1149 SMART SM00388 783 849 1.4E-14 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_18025 7c9f346aef7c7383b044f49e1553163a 1149 Pfam PF00512 His Kinase A (phospho-acceptor) domain 783 849 1.5E-11 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_18025 7c9f346aef7c7383b044f49e1553163a 1149 SUPERFAMILY SSF52172 1028 1145 1.57E-19 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_18025 7c9f346aef7c7383b044f49e1553163a 1149 SMART SM00448 1029 1140 6.4E-15 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_18025 7c9f346aef7c7383b044f49e1553163a 1149 Pfam PF12860 PAS fold 643 757 1.2E-43 T 17-10-2018 BJD13_18025 7c9f346aef7c7383b044f49e1553163a 1149 SUPERFAMILY SSF55874 839 1002 1.31E-38 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_18025 7c9f346aef7c7383b044f49e1553163a 1149 Gene3D G3DSA:3.40.50.2300 1026 1147 9.1E-19 T 17-10-2018 BJD13_18025 7c9f346aef7c7383b044f49e1553163a 1149 SMART SM00387 893 1004 1.1E-25 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_18025 7c9f346aef7c7383b044f49e1553163a 1149 SUPERFAMILY SSF55785 628 750 3.32E-11 T 17-10-2018 IPR035965 PAS domain superfamily BJD13_18025 7c9f346aef7c7383b044f49e1553163a 1149 Gene3D G3DSA:3.30.565.10 854 1005 1.2E-33 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_18025 7c9f346aef7c7383b044f49e1553163a 1149 Gene3D G3DSA:1.20.1730.10 38 467 1.2E-17 T 17-10-2018 IPR038377 Sodium/glucose symporter superfamily BJD13_18025 7c9f346aef7c7383b044f49e1553163a 1149 PRINTS PR00344 Bacterial sensor protein C-terminal signature 988 1001 7.8E-11 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_18025 7c9f346aef7c7383b044f49e1553163a 1149 PRINTS PR00344 Bacterial sensor protein C-terminal signature 947 957 7.8E-11 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_18025 7c9f346aef7c7383b044f49e1553163a 1149 PRINTS PR00344 Bacterial sensor protein C-terminal signature 929 943 7.8E-11 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_18025 7c9f346aef7c7383b044f49e1553163a 1149 PRINTS PR00344 Bacterial sensor protein C-terminal signature 964 982 7.8E-11 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_18025 7c9f346aef7c7383b044f49e1553163a 1149 Gene3D G3DSA:3.30.450.20 624 757 4.0E-16 T 17-10-2018 BJD13_18025 7c9f346aef7c7383b044f49e1553163a 1149 SUPERFAMILY SSF47384 768 850 1.47E-13 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD13_18025 7c9f346aef7c7383b044f49e1553163a 1149 SMART SM00091 637 706 0.0028 T 17-10-2018 IPR000014 PAS domain BJD13_18025 7c9f346aef7c7383b044f49e1553163a 1149 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 894 1001 7.0E-19 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_17585 70f991cb0475707b1bb128d58aa95076 243 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 11 235 31.971 T 17-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BJD13_17585 70f991cb0475707b1bb128d58aa95076 243 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 66 79 - T 17-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BJD13_17585 70f991cb0475707b1bb128d58aa95076 243 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 13 229 1.9E-40 T 17-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BJD13_17585 70f991cb0475707b1bb128d58aa95076 243 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 14 231 4.5E-67 T 17-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BJD13_17585 70f991cb0475707b1bb128d58aa95076 243 SMART SM00934 13 230 1.6E-71 T 17-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BJD13_17585 70f991cb0475707b1bb128d58aa95076 243 Gene3D G3DSA:3.20.20.70 9 236 4.0E-68 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD13_17585 70f991cb0475707b1bb128d58aa95076 243 SUPERFAMILY SSF51366 12 234 1.98E-59 T 17-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 BJD13_04385 8c7c60296ab83c38002c8deb33e8a0a4 566 SMART SM00646 379 534 2.7E-63 T 17-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 BJD13_04385 8c7c60296ab83c38002c8deb33e8a0a4 566 Gene3D G3DSA:3.40.630.40 305 542 2.0E-75 T 17-10-2018 BJD13_04385 8c7c60296ab83c38002c8deb33e8a0a4 566 SUPERFAMILY SSF53187 317 537 2.98E-52 T 17-10-2018 BJD13_04385 8c7c60296ab83c38002c8deb33e8a0a4 566 Pfam PF11741 AMIN domain 39 113 4.1E-12 T 17-10-2018 IPR021731 AMIN domain BJD13_04385 8c7c60296ab83c38002c8deb33e8a0a4 566 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 319 534 8.1E-48 T 17-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 BJD13_04385 8c7c60296ab83c38002c8deb33e8a0a4 566 Gene3D G3DSA:2.60.40.3500 21 129 5.6E-15 T 17-10-2018 BJD13_14620 843d8261ae6f042468aaba4480fee088 162 ProSitePatterns PS01117 MarR-type HTH domain signature. 79 113 - T 17-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site BJD13_14620 843d8261ae6f042468aaba4480fee088 162 Gene3D G3DSA:1.10.10.10 1 162 7.1E-49 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_14620 843d8261ae6f042468aaba4480fee088 162 Pfam PF12802 MarR family 45 104 7.9E-12 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD13_14620 843d8261ae6f042468aaba4480fee088 162 SUPERFAMILY SSF46785 10 152 2.51E-32 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_14620 843d8261ae6f042468aaba4480fee088 162 SMART SM00347 40 140 3.7E-16 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD13_14620 843d8261ae6f042468aaba4480fee088 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 81 96 1.8E-10 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD13_14620 843d8261ae6f042468aaba4480fee088 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 130 150 1.8E-10 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD13_14620 843d8261ae6f042468aaba4480fee088 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 100 116 1.8E-10 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD13_14620 843d8261ae6f042468aaba4480fee088 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 64 80 1.8E-10 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD13_22020 f669e6d8f7121da37963ce57f523a430 764 Gene3D G3DSA:2.40.170.20 182 764 3.4E-70 T 17-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BJD13_22020 f669e6d8f7121da37963ce57f523a430 764 Pfam PF07715 TonB-dependent Receptor Plug Domain 61 160 6.2E-11 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_22020 f669e6d8f7121da37963ce57f523a430 764 SUPERFAMILY SSF56935 41 764 3.87E-89 T 17-10-2018 BJD13_22020 f669e6d8f7121da37963ce57f523a430 764 Gene3D G3DSA:2.170.130.10 42 174 7.0E-11 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_22020 f669e6d8f7121da37963ce57f523a430 764 Pfam PF00593 TonB dependent receptor 252 763 2.3E-41 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_22105 9c22900195a2eeab35d72b19f8417a36 196 PIRSF PIRSF006806 1 187 1.9E-28 T 17-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase BJD13_22105 9c22900195a2eeab35d72b19f8417a36 196 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 7 184 1.5E-30 T 17-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase BJD13_22105 9c22900195a2eeab35d72b19f8417a36 196 SUPERFAMILY SSF100950 4 190 9.35E-48 T 17-10-2018 IPR037171 NagB/RpiA transferase-like BJD13_22105 9c22900195a2eeab35d72b19f8417a36 196 Gene3D G3DSA:3.40.50.10420 4 194 1.0E-44 T 17-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily BJD13_22105 9c22900195a2eeab35d72b19f8417a36 196 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 6 184 2.0E-46 T 17-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase BJD13_03505 0595cb9eb6c2a398a555b44e3f5bd249 634 SUPERFAMILY SSF81271 2 61 4.58E-15 T 17-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 BJD13_03505 0595cb9eb6c2a398a555b44e3f5bd249 634 Gene3D G3DSA:3.30.54.20 130 187 3.4E-60 T 17-10-2018 BJD13_03505 0595cb9eb6c2a398a555b44e3f5bd249 634 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 321 529 7.1E-40 T 17-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD13_03505 0595cb9eb6c2a398a555b44e3f5bd249 634 Gene3D G3DSA:3.10.20.30 1 62 8.4E-24 T 17-10-2018 IPR012675 Beta-grasp domain superfamily BJD13_03505 0595cb9eb6c2a398a555b44e3f5bd249 634 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 631 5.1E-215 T 17-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BJD13_03505 0595cb9eb6c2a398a555b44e3f5bd249 634 Pfam PF03129 Anticodon binding domain 541 630 1.8E-21 T 17-10-2018 IPR004154 Anticodon-binding BJD13_03505 0595cb9eb6c2a398a555b44e3f5bd249 634 SUPERFAMILY SSF55681 243 526 4.4E-94 T 17-10-2018 BJD13_03505 0595cb9eb6c2a398a555b44e3f5bd249 634 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 634 33.574 T 17-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BJD13_03505 0595cb9eb6c2a398a555b44e3f5bd249 634 SUPERFAMILY SSF52954 530 631 1.07E-31 T 17-10-2018 BJD13_03505 0595cb9eb6c2a398a555b44e3f5bd249 634 SMART SM00863 170 219 1.6E-20 T 17-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 BJD13_03505 0595cb9eb6c2a398a555b44e3f5bd249 634 Gene3D G3DSA:3.30.980.10 69 222 3.4E-60 T 17-10-2018 BJD13_03505 0595cb9eb6c2a398a555b44e3f5bd249 634 Gene3D G3DSA:3.40.50.800 532 634 4.4E-32 T 17-10-2018 IPR036621 Anticodon-binding domain superfamily BJD13_03505 0595cb9eb6c2a398a555b44e3f5bd249 634 Pfam PF02824 TGS domain 2 61 1.2E-11 T 17-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 BJD13_03505 0595cb9eb6c2a398a555b44e3f5bd249 634 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 174 219 1.8E-14 T 17-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 BJD13_03505 0595cb9eb6c2a398a555b44e3f5bd249 634 SUPERFAMILY SSF55186 63 241 2.35E-63 T 17-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 BJD13_03505 0595cb9eb6c2a398a555b44e3f5bd249 634 Gene3D G3DSA:3.30.930.10 223 531 1.2E-121 T 17-10-2018 BJD13_03505 0595cb9eb6c2a398a555b44e3f5bd249 634 PRINTS PR01047 Threonyl-tRNA synthetase signature 464 492 6.4E-51 T 17-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BJD13_03505 0595cb9eb6c2a398a555b44e3f5bd249 634 PRINTS PR01047 Threonyl-tRNA synthetase signature 507 520 6.4E-51 T 17-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BJD13_03505 0595cb9eb6c2a398a555b44e3f5bd249 634 PRINTS PR01047 Threonyl-tRNA synthetase signature 329 357 6.4E-51 T 17-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BJD13_03505 0595cb9eb6c2a398a555b44e3f5bd249 634 PRINTS PR01047 Threonyl-tRNA synthetase signature 534 546 6.4E-51 T 17-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BJD13_03505 0595cb9eb6c2a398a555b44e3f5bd249 634 PRINTS PR01047 Threonyl-tRNA synthetase signature 362 385 6.4E-51 T 17-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BJD13_04780 e7fab88a282bc2ca215e70714ea2968d 250 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 48 228 9.1E-71 T 17-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD13_04780 e7fab88a282bc2ca215e70714ea2968d 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 103 123 3.3E-47 T 17-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD13_04780 e7fab88a282bc2ca215e70714ea2968d 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 65 85 3.3E-47 T 17-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD13_04780 e7fab88a282bc2ca215e70714ea2968d 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 207 231 3.3E-47 T 17-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD13_04780 e7fab88a282bc2ca215e70714ea2968d 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 159 185 3.3E-47 T 17-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD13_04780 e7fab88a282bc2ca215e70714ea2968d 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 124 144 3.3E-47 T 17-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD13_04780 e7fab88a282bc2ca215e70714ea2968d 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 48 65 3.3E-47 T 17-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD13_04780 e7fab88a282bc2ca215e70714ea2968d 250 Pfam PF01578 Cytochrome C assembly protein 36 187 5.2E-29 T 17-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 BJD13_03340 c9923c14a38b36e3302c9acebabaa4d2 673 SUPERFAMILY SSF52540 3 415 1.42E-132 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_03340 c9923c14a38b36e3302c9acebabaa4d2 673 SMART SM00487 9 426 1.0E-26 T 17-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BJD13_03340 c9923c14a38b36e3302c9acebabaa4d2 673 Pfam PF02151 UvrB/uvrC motif 637 669 5.6E-10 T 17-10-2018 IPR001943 UVR domain GO:0005515 BJD13_03340 c9923c14a38b36e3302c9acebabaa4d2 673 Pfam PF04851 Type III restriction enzyme, res subunit 16 105 4.2E-9 T 17-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 BJD13_03340 c9923c14a38b36e3302c9acebabaa4d2 673 Gene3D G3DSA:4.10.860.10 619 672 3.0E-16 T 17-10-2018 BJD13_03340 c9923c14a38b36e3302c9acebabaa4d2 673 Pfam PF00271 Helicase conserved C-terminal domain 441 544 1.4E-17 T 17-10-2018 IPR001650 Helicase, C-terminal BJD13_03340 c9923c14a38b36e3302c9acebabaa4d2 673 SMART SM00490 460 546 2.5E-20 T 17-10-2018 IPR001650 Helicase, C-terminal BJD13_03340 c9923c14a38b36e3302c9acebabaa4d2 673 Gene3D G3DSA:3.40.50.300 258 414 3.1E-50 T 17-10-2018 BJD13_03340 c9923c14a38b36e3302c9acebabaa4d2 673 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 670 43.106 T 17-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 BJD13_03340 c9923c14a38b36e3302c9acebabaa4d2 673 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 4 668 0.0 T 17-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 BJD13_03340 c9923c14a38b36e3302c9acebabaa4d2 673 Pfam PF12344 Ultra-violet resistance protein B 552 593 7.8E-23 T 17-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain BJD13_03340 c9923c14a38b36e3302c9acebabaa4d2 673 SUPERFAMILY SSF52540 37 582 1.33E-36 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_03340 c9923c14a38b36e3302c9acebabaa4d2 673 Gene3D G3DSA:3.40.50.300 415 596 1.8E-49 T 17-10-2018 BJD13_03340 c9923c14a38b36e3302c9acebabaa4d2 673 SUPERFAMILY SSF46600 623 669 8.76E-12 T 17-10-2018 IPR036876 UVR domain superfamily BJD13_03340 c9923c14a38b36e3302c9acebabaa4d2 673 Gene3D G3DSA:3.40.50.300 1 243 5.4E-73 T 17-10-2018 BJD13_10770 ec17538117f6e22f78313acb48b99a09 362 Gene3D G3DSA:3.30.390.50 242 346 1.2E-24 T 17-10-2018 BJD13_10770 ec17538117f6e22f78313acb48b99a09 362 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 245 342 1.0E-17 T 17-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal BJD13_10770 ec17538117f6e22f78313acb48b99a09 362 Gene3D G3DSA:3.30.465.10 9 238 1.4E-74 T 17-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 BJD13_10770 ec17538117f6e22f78313acb48b99a09 362 SUPERFAMILY SSF55447 244 345 3.66E-27 T 17-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily BJD13_10770 ec17538117f6e22f78313acb48b99a09 362 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 13 237 1.0E-46 T 17-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 BJD13_10770 ec17538117f6e22f78313acb48b99a09 362 SUPERFAMILY SSF56176 11 237 6.0E-58 T 17-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 BJD13_10770 ec17538117f6e22f78313acb48b99a09 362 SMART SM01092 245 344 2.0E-28 T 17-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal BJD13_09035 a38ac4b9bf3acbe96a75db82a079d542 343 Pfam PF01628 HrcA protein C terminal domain 104 323 1.9E-56 T 17-10-2018 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 BJD13_09035 a38ac4b9bf3acbe96a75db82a079d542 343 PIRSF PIRSF005485 1 341 1.2E-112 T 17-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 BJD13_09035 a38ac4b9bf3acbe96a75db82a079d542 343 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 3 335 5.3E-106 T 17-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 BJD13_09035 a38ac4b9bf3acbe96a75db82a079d542 343 Pfam PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding 2 73 5.6E-6 T 17-10-2018 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain GO:0003677|GO:0006355 BJD13_09035 a38ac4b9bf3acbe96a75db82a079d542 343 SUPERFAMILY SSF46785 1 82 3.39E-23 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_09035 a38ac4b9bf3acbe96a75db82a079d542 343 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 1 330 28.129 T 17-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 BJD13_09035 a38ac4b9bf3acbe96a75db82a079d542 343 Gene3D G3DSA:3.30.390.60 127 228 4.0E-37 T 17-10-2018 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily BJD13_09035 a38ac4b9bf3acbe96a75db82a079d542 343 Gene3D G3DSA:3.30.450.40 105 333 4.0E-37 T 17-10-2018 IPR029016 GAF-like domain superfamily BJD13_09035 a38ac4b9bf3acbe96a75db82a079d542 343 SUPERFAMILY SSF55781 71 338 2.01E-59 T 17-10-2018 BJD13_09035 a38ac4b9bf3acbe96a75db82a079d542 343 Gene3D G3DSA:1.10.10.10 1 83 1.8E-30 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_01760 bf698a6e27e4b4454681098d1a9071f4 290 Pfam PF03668 P-loop ATPase protein family 8 287 2.2E-95 T 17-10-2018 IPR005337 RapZ-like family GO:0005524 BJD13_01760 bf698a6e27e4b4454681098d1a9071f4 290 PIRSF PIRSF005052 6 290 6.2E-112 T 17-10-2018 IPR005337 RapZ-like family GO:0005524 BJD13_01760 bf698a6e27e4b4454681098d1a9071f4 290 Gene3D G3DSA:3.40.50.300 2 161 1.8E-5 T 17-10-2018 BJD13_01760 bf698a6e27e4b4454681098d1a9071f4 290 SUPERFAMILY SSF52540 9 158 2.09E-10 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_01760 bf698a6e27e4b4454681098d1a9071f4 290 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 6 290 38.352 T 17-10-2018 IPR005337 RapZ-like family GO:0005524 BJD13_15415 684a696c1f6a011eb595a499f27d2bea 292 Gene3D G3DSA:3.40.50.720 1 158 1.2E-45 T 17-10-2018 BJD13_15415 684a696c1f6a011eb595a499f27d2bea 292 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 159 2.0E-35 T 17-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 BJD13_15415 684a696c1f6a011eb595a499f27d2bea 292 Gene3D G3DSA:1.10.1040.10 159 291 8.4E-30 T 17-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BJD13_15415 684a696c1f6a011eb595a499f27d2bea 292 SUPERFAMILY SSF48179 165 289 1.29E-24 T 17-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BJD13_15415 684a696c1f6a011eb595a499f27d2bea 292 SUPERFAMILY SSF51735 1 160 3.94E-39 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_15415 684a696c1f6a011eb595a499f27d2bea 292 PIRSF PIRSF000103 1 292 6.8E-76 T 17-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 BJD13_15415 684a696c1f6a011eb595a499f27d2bea 292 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 17-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 BJD13_15415 684a696c1f6a011eb595a499f27d2bea 292 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 278 1.9E-15 T 17-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 BJD13_12845 4e14d08cb5772a30ee0ed69fc920c372 495 Gene3D G3DSA:3.40.1390.10 2 99 1.8E-19 T 17-10-2018 BJD13_12845 4e14d08cb5772a30ee0ed69fc920c372 495 Gene3D G3DSA:3.40.1190.10 100 335 7.5E-81 T 17-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BJD13_12845 4e14d08cb5772a30ee0ed69fc920c372 495 Pfam PF02875 Mur ligase family, glutamate ligase domain 333 417 1.9E-19 T 17-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 BJD13_12845 4e14d08cb5772a30ee0ed69fc920c372 495 SUPERFAMILY SSF53244 332 487 8.11E-47 T 17-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BJD13_12845 4e14d08cb5772a30ee0ed69fc920c372 495 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 5 485 33.799 T 17-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 BJD13_12845 4e14d08cb5772a30ee0ed69fc920c372 495 Gene3D G3DSA:3.90.190.20 342 489 2.3E-54 T 17-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BJD13_12845 4e14d08cb5772a30ee0ed69fc920c372 495 SUPERFAMILY SSF63418 9 100 3.14E-19 T 17-10-2018 IPR035911 MurE/MurF, N-terminal BJD13_12845 4e14d08cb5772a30ee0ed69fc920c372 495 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 20 485 3.4E-152 T 17-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 BJD13_12845 4e14d08cb5772a30ee0ed69fc920c372 495 Pfam PF08245 Mur ligase middle domain 109 311 9.4E-49 T 17-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 BJD13_12845 4e14d08cb5772a30ee0ed69fc920c372 495 Pfam PF01225 Mur ligase family, catalytic domain 22 96 6.1E-10 T 17-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 BJD13_12845 4e14d08cb5772a30ee0ed69fc920c372 495 SUPERFAMILY SSF53623 100 331 1.7E-75 T 17-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BJD13_02310 92b44f6e31e679bdd2fe8c0394965d50 1154 Pfam PF00271 Helicase conserved C-terminal domain 815 914 4.7E-16 T 17-10-2018 IPR001650 Helicase, C-terminal BJD13_02310 92b44f6e31e679bdd2fe8c0394965d50 1154 Gene3D G3DSA:3.90.1150.50 1011 1153 2.4E-41 T 17-10-2018 IPR037235 TRCF-like, C-terminal domain BJD13_02310 92b44f6e31e679bdd2fe8c0394965d50 1154 Pfam PF02559 CarD-like/TRCF domain 485 578 1.9E-23 T 17-10-2018 IPR003711 CarD-like/TRCF domain BJD13_02310 92b44f6e31e679bdd2fe8c0394965d50 1154 SMART SM00982 1014 1114 6.4E-50 T 17-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 BJD13_02310 92b44f6e31e679bdd2fe8c0394965d50 1154 Pfam PF03461 TRCF domain 1015 1107 8.6E-27 T 17-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 BJD13_02310 92b44f6e31e679bdd2fe8c0394965d50 1154 SUPERFAMILY SSF52540 528 789 1.56E-59 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_02310 92b44f6e31e679bdd2fe8c0394965d50 1154 SMART SM00490 831 915 7.4E-19 T 17-10-2018 IPR001650 Helicase, C-terminal BJD13_02310 92b44f6e31e679bdd2fe8c0394965d50 1154 SUPERFAMILY SSF141259 476 553 2.88E-21 T 17-10-2018 IPR036101 CarD-like/TRCF domain superfamily BJD13_02310 92b44f6e31e679bdd2fe8c0394965d50 1154 SUPERFAMILY SSF52540 25 346 7.97E-94 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_02310 92b44f6e31e679bdd2fe8c0394965d50 1154 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 27 1115 27.965 T 17-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 BJD13_02310 92b44f6e31e679bdd2fe8c0394965d50 1154 SMART SM00487 605 795 2.9E-34 T 17-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BJD13_02310 92b44f6e31e679bdd2fe8c0394965d50 1154 SUPERFAMILY SSF143517 1006 1152 7.85E-42 T 17-10-2018 IPR037235 TRCF-like, C-terminal domain BJD13_02310 92b44f6e31e679bdd2fe8c0394965d50 1154 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 153 1087 0.0 T 17-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 BJD13_02310 92b44f6e31e679bdd2fe8c0394965d50 1154 Gene3D G3DSA:3.30.2060.10 135 220 1.6E-111 T 17-10-2018 BJD13_02310 92b44f6e31e679bdd2fe8c0394965d50 1154 Gene3D G3DSA:3.40.50.11140 360 458 9.7E-17 T 17-10-2018 BJD13_02310 92b44f6e31e679bdd2fe8c0394965d50 1154 SUPERFAMILY SSF52540 787 994 4.97E-44 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_02310 92b44f6e31e679bdd2fe8c0394965d50 1154 SUPERFAMILY SSF52540 360 470 7.43E-22 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_02310 92b44f6e31e679bdd2fe8c0394965d50 1154 Gene3D G3DSA:3.40.50.300 484 994 3.5E-230 T 17-10-2018 BJD13_02310 92b44f6e31e679bdd2fe8c0394965d50 1154 Pfam PF00270 DEAD/DEAH box helicase 613 769 2.2E-16 T 17-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BJD13_02310 92b44f6e31e679bdd2fe8c0394965d50 1154 Gene3D G3DSA:3.40.50.300 547 786 3.5E-230 T 17-10-2018 BJD13_02310 92b44f6e31e679bdd2fe8c0394965d50 1154 Gene3D G3DSA:2.30.30.840 488 546 3.5E-230 T 17-10-2018 BJD13_02310 92b44f6e31e679bdd2fe8c0394965d50 1154 Gene3D G3DSA:3.40.50.11180 28 339 1.6E-111 T 17-10-2018 BJD13_02310 92b44f6e31e679bdd2fe8c0394965d50 1154 SMART SM01058 484 581 2.4E-47 T 17-10-2018 IPR003711 CarD-like/TRCF domain BJD13_21230 1367f6f7133c9c341dc7570d2ede5719 243 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 27 42 - T 17-10-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 BJD13_21230 1367f6f7133c9c341dc7570d2ede5719 243 Pfam PF01144 Coenzyme A transferase 16 225 7.6E-80 T 17-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 BJD13_21230 1367f6f7133c9c341dc7570d2ede5719 243 SUPERFAMILY SSF100950 14 236 5.44E-87 T 17-10-2018 IPR037171 NagB/RpiA transferase-like BJD13_21230 1367f6f7133c9c341dc7570d2ede5719 243 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 12 225 3.4E-80 T 17-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 BJD13_21230 1367f6f7133c9c341dc7570d2ede5719 243 Gene3D G3DSA:3.40.1080.10 8 236 5.4E-95 T 17-10-2018 BJD13_21230 1367f6f7133c9c341dc7570d2ede5719 243 SMART SM00882 14 226 7.0E-92 T 17-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 BJD13_12155 ef44c90caa326f646d782e14b013f8e7 361 SUPERFAMILY SSF56752 12 357 3.4E-114 T 17-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 BJD13_12155 ef44c90caa326f646d782e14b013f8e7 361 ProSitePatterns PS00770 Aminotransferases class-IV signature. 236 266 - T 17-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 BJD13_12155 ef44c90caa326f646d782e14b013f8e7 361 Gene3D G3DSA:3.20.10.10 174 343 1.2E-134 T 17-10-2018 BJD13_12155 ef44c90caa326f646d782e14b013f8e7 361 Pfam PF01063 Amino-transferase class IV 73 316 1.2E-34 T 17-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 BJD13_12155 ef44c90caa326f646d782e14b013f8e7 361 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 47 360 7.8E-143 T 17-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 BJD13_12155 ef44c90caa326f646d782e14b013f8e7 361 Gene3D G3DSA:3.30.470.10 28 356 1.2E-134 T 17-10-2018 BJD13_12155 ef44c90caa326f646d782e14b013f8e7 361 PIRSF PIRSF006468 4 361 2.3E-135 T 17-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 BJD13_20680 7d60e79de0d11d16a6739e06b34749ca 385 SUPERFAMILY SSF103088 164 276 7.98E-20 T 17-10-2018 IPR036737 OmpA-like domain superfamily BJD13_20680 7d60e79de0d11d16a6739e06b34749ca 385 Gene3D G3DSA:3.30.1330.60 120 300 4.3E-52 T 17-10-2018 IPR036737 OmpA-like domain superfamily BJD13_20680 7d60e79de0d11d16a6739e06b34749ca 385 Pfam PF00691 OmpA family 173 257 7.1E-13 T 17-10-2018 IPR006665 OmpA-like domain BJD13_20680 7d60e79de0d11d16a6739e06b34749ca 385 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 14 64 2.4E-19 T 17-10-2018 IPR025713 Motility protein B, N-terminal domain BJD13_01845 a862673abf97c9cf6e7932d358d63379 341 SUPERFAMILY SSF56042 165 336 1.42E-57 T 17-10-2018 IPR036676 PurM-like, C-terminal domain superfamily BJD13_01845 a862673abf97c9cf6e7932d358d63379 341 Pfam PF02769 AIR synthase related protein, C-terminal domain 170 335 1.4E-36 T 17-10-2018 IPR010918 PurM-like, C-terminal domain BJD13_01845 a862673abf97c9cf6e7932d358d63379 341 SUPERFAMILY SSF55326 1 163 8.67E-53 T 17-10-2018 IPR036921 PurM-like, N-terminal domain superfamily BJD13_01845 a862673abf97c9cf6e7932d358d63379 341 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 1 340 46.021 T 17-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BJD13_01845 a862673abf97c9cf6e7932d358d63379 341 Gene3D G3DSA:3.30.1330.10 1 164 7.5E-68 T 17-10-2018 IPR036921 PurM-like, N-terminal domain superfamily BJD13_01845 a862673abf97c9cf6e7932d358d63379 341 Pfam PF00586 AIR synthase related protein, N-terminal domain 55 157 6.5E-14 T 17-10-2018 IPR016188 PurM-like, N-terminal domain BJD13_01845 a862673abf97c9cf6e7932d358d63379 341 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 1 330 3.7E-136 T 17-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BJD13_01845 a862673abf97c9cf6e7932d358d63379 341 Gene3D G3DSA:3.90.650.10 166 341 6.2E-63 T 17-10-2018 IPR036676 PurM-like, C-terminal domain superfamily BJD13_13270 66500b1b4d7aeb4752c2a0a8336720b6 500 Gene3D G3DSA:3.40.50.2300 379 500 7.8E-12 T 17-10-2018 BJD13_13270 66500b1b4d7aeb4752c2a0a8336720b6 500 SUPERFAMILY SSF52172 379 498 3.13E-15 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_13270 66500b1b4d7aeb4752c2a0a8336720b6 500 Gene3D G3DSA:3.30.565.10 214 367 1.8E-36 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_13270 66500b1b4d7aeb4752c2a0a8336720b6 500 PRINTS PR00344 Bacterial sensor protein C-terminal signature 323 341 4.3E-17 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_13270 66500b1b4d7aeb4752c2a0a8336720b6 500 PRINTS PR00344 Bacterial sensor protein C-terminal signature 294 308 4.3E-17 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_13270 66500b1b4d7aeb4752c2a0a8336720b6 500 PRINTS PR00344 Bacterial sensor protein C-terminal signature 347 360 4.3E-17 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_13270 66500b1b4d7aeb4752c2a0a8336720b6 500 PRINTS PR00344 Bacterial sensor protein C-terminal signature 312 322 4.3E-17 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_13270 66500b1b4d7aeb4752c2a0a8336720b6 500 Gene3D G3DSA:1.10.287.130 140 212 5.2E-9 T 17-10-2018 BJD13_13270 66500b1b4d7aeb4752c2a0a8336720b6 500 Pfam PF00072 Response regulator receiver domain 383 459 1.6E-5 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_13270 66500b1b4d7aeb4752c2a0a8336720b6 500 Pfam PF00072 Response regulator receiver domain 13 122 4.9E-17 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_13270 66500b1b4d7aeb4752c2a0a8336720b6 500 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 259 361 8.1E-16 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_13270 66500b1b4d7aeb4752c2a0a8336720b6 500 Gene3D G3DSA:3.40.50.2300 4 139 4.8E-24 T 17-10-2018 BJD13_13270 66500b1b4d7aeb4752c2a0a8336720b6 500 SMART SM00387 256 363 1.9E-26 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_13270 66500b1b4d7aeb4752c2a0a8336720b6 500 SUPERFAMILY SSF55874 206 362 1.44E-34 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_13270 66500b1b4d7aeb4752c2a0a8336720b6 500 SMART SM00448 11 122 1.2E-20 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_13270 66500b1b4d7aeb4752c2a0a8336720b6 500 SMART SM00448 381 493 0.0082 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_13270 66500b1b4d7aeb4752c2a0a8336720b6 500 SUPERFAMILY SSF52172 10 143 1.29E-26 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_13270 66500b1b4d7aeb4752c2a0a8336720b6 500 SMART SM00388 150 215 4.0E-4 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_13270 66500b1b4d7aeb4752c2a0a8336720b6 500 SUPERFAMILY SSF47384 145 213 4.9E-7 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD13_06860 ebea9a7d885b9bb30188916c740e2cf8 703 Gene3D G3DSA:1.20.1440.210 5 135 1.1E-22 T 17-10-2018 BJD13_06860 ebea9a7d885b9bb30188916c740e2cf8 703 Gene3D G3DSA:1.20.120.1530 163 308 9.9E-36 T 17-10-2018 BJD13_06860 ebea9a7d885b9bb30188916c740e2cf8 703 Pfam PF00672 HAMP domain 170 218 2.8E-6 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_06860 ebea9a7d885b9bb30188916c740e2cf8 703 Pfam PF05227 CHASE3 domain 3 137 9.9E-30 T 17-10-2018 IPR007891 CHASE3 BJD13_06860 ebea9a7d885b9bb30188916c740e2cf8 703 SMART SM00283 404 651 8.9E-90 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD13_06860 ebea9a7d885b9bb30188916c740e2cf8 703 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 464 618 1.7E-50 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD13_06860 ebea9a7d885b9bb30188916c740e2cf8 703 Gene3D G3DSA:1.10.287.950 350 653 1.6E-82 T 17-10-2018 BJD13_06860 ebea9a7d885b9bb30188916c740e2cf8 703 SUPERFAMILY SSF58104 371 652 3.53E-69 T 17-10-2018 BJD13_06860 ebea9a7d885b9bb30188916c740e2cf8 703 SMART SM00304 351 403 38.0 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_06860 ebea9a7d885b9bb30188916c740e2cf8 703 SMART SM00304 170 222 1.5E-5 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_06860 ebea9a7d885b9bb30188916c740e2cf8 703 SUPERFAMILY SSF158472 170 220 1.02E-6 T 17-10-2018 BJD13_12490 336af8a2298563fe786fe5830e4682ca 164 Gene3D G3DSA:3.40.430.10 1 164 9.2E-50 T 17-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 BJD13_12490 336af8a2298563fe786fe5830e4682ca 164 SUPERFAMILY SSF53597 2 164 1.39E-48 T 17-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 BJD13_12490 336af8a2298563fe786fe5830e4682ca 164 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 14 36 - T 17-10-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 BJD13_12490 336af8a2298563fe786fe5830e4682ca 164 PRINTS PR00070 Dihydrofolate reductase signature 41 52 1.7E-12 T 17-10-2018 BJD13_12490 336af8a2298563fe786fe5830e4682ca 164 PRINTS PR00070 Dihydrofolate reductase signature 28 36 1.7E-12 T 17-10-2018 BJD13_12490 336af8a2298563fe786fe5830e4682ca 164 PRINTS PR00070 Dihydrofolate reductase signature 14 24 1.7E-12 T 17-10-2018 BJD13_12490 336af8a2298563fe786fe5830e4682ca 164 PRINTS PR00070 Dihydrofolate reductase signature 94 108 1.7E-12 T 17-10-2018 BJD13_12490 336af8a2298563fe786fe5830e4682ca 164 PIRSF PIRSF000194 1 164 5.8E-55 T 17-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 BJD13_12490 336af8a2298563fe786fe5830e4682ca 164 Pfam PF00186 Dihydrofolate reductase 2 163 7.6E-52 T 17-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 BJD13_17635 34b5cfd3bfe6031328990024d3f64e45 67 Pfam PF04325 Protein of unknown function (DUF465) 14 58 4.5E-13 T 17-10-2018 IPR007420 Protein of unknown function DUF465 BJD13_17635 34b5cfd3bfe6031328990024d3f64e45 67 Gene3D G3DSA:1.20.58.660 8 62 1.9E-6 T 17-10-2018 BJD13_10940 d610aa12ab601d8f080e51eeb91451a3 287 SUPERFAMILY SSF117892 51 190 9.02E-20 T 17-10-2018 IPR036013 Band 7/SPFH domain superfamily BJD13_10940 d610aa12ab601d8f080e51eeb91451a3 287 SMART SM00244 19 184 1.1E-16 T 17-10-2018 IPR001107 Band 7 domain BJD13_10940 d610aa12ab601d8f080e51eeb91451a3 287 Gene3D G3DSA:3.30.479.30 48 187 1.5E-15 T 17-10-2018 BJD13_10940 d610aa12ab601d8f080e51eeb91451a3 287 Pfam PF01145 SPFH domain / Band 7 family 23 201 8.0E-24 T 17-10-2018 IPR001107 Band 7 domain BJD13_10940 d610aa12ab601d8f080e51eeb91451a3 287 PIRSF PIRSF005651 1 287 9.5E-81 T 17-10-2018 IPR010200 HflC GO:0016021|GO:0052547 BJD13_17670 c5628d99bc07175b78f658892889b10c 977 Pfam PF07715 TonB-dependent Receptor Plug Domain 73 182 9.7E-14 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_17670 c5628d99bc07175b78f658892889b10c 977 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 53 977 1.7E-242 T 17-10-2018 IPR010104 Bacterial TonB-dependent receptor BJD13_17670 c5628d99bc07175b78f658892889b10c 977 Gene3D G3DSA:2.170.130.10 44 188 1.5E-17 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_17670 c5628d99bc07175b78f658892889b10c 977 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 960 977 - T 17-10-2018 IPR010917 TonB-dependent receptor, conserved site BJD13_17670 c5628d99bc07175b78f658892889b10c 977 Pfam PF00593 TonB dependent receptor 488 974 3.5E-33 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_17670 c5628d99bc07175b78f658892889b10c 977 SUPERFAMILY SSF56935 48 977 8.24E-76 T 17-10-2018 BJD13_09040 10f6cf67b7b884f00a422f2c05f72324 554 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 552 4.6E-145 T 17-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 BJD13_09040 10f6cf67b7b884f00a422f2c05f72324 554 SUPERFAMILY SSF52540 1 507 2.66E-55 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_09040 10f6cf67b7b884f00a422f2c05f72324 554 PIRSF PIRSF003128 1 554 1.9E-146 T 17-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 BJD13_09040 10f6cf67b7b884f00a422f2c05f72324 554 Pfam PF02463 RecF/RecN/SMC N terminal domain 1 507 5.8E-20 T 17-10-2018 IPR003395 RecF/RecN/SMC, N-terminal BJD13_09040 10f6cf67b7b884f00a422f2c05f72324 554 Gene3D G3DSA:3.40.50.300 261 553 1.6E-49 T 17-10-2018 BJD13_09040 10f6cf67b7b884f00a422f2c05f72324 554 Gene3D G3DSA:3.40.50.300 1 209 4.2E-42 T 17-10-2018 BJD13_18090 2d17b669ea009106bb2f6ffeb9e5e93e 540 Gene3D G3DSA:2.60.120.200 358 538 1.7E-15 T 17-10-2018 BJD13_18090 2d17b669ea009106bb2f6ffeb9e5e93e 540 Gene3D G3DSA:2.115.10.20 55 338 8.3E-71 T 17-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily BJD13_18090 2d17b669ea009106bb2f6ffeb9e5e93e 540 SUPERFAMILY SSF75005 56 335 3.38E-74 T 17-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily BJD13_18090 2d17b669ea009106bb2f6ffeb9e5e93e 540 SUPERFAMILY SSF49899 356 537 3.56E-18 T 17-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily BJD13_18090 2d17b669ea009106bb2f6ffeb9e5e93e 540 Pfam PF04616 Glycosyl hydrolases family 43 56 328 6.5E-88 T 17-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 BJD13_05405 023c4cc6782a90c5e623a80bc981ee76 619 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 384 538 5.1E-50 T 17-10-2018 IPR001162 UvrC family homology region BJD13_05405 023c4cc6782a90c5e623a80bc981ee76 619 Gene3D G3DSA:3.40.1440.10 10 106 1.3E-29 T 17-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 BJD13_05405 023c4cc6782a90c5e623a80bc981ee76 619 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 16 584 6.9E-177 T 17-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 BJD13_05405 023c4cc6782a90c5e623a80bc981ee76 619 SMART SM00278 584 603 230.0 T 17-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 BJD13_05405 023c4cc6782a90c5e623a80bc981ee76 619 SMART SM00278 552 571 1.2 T 17-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 BJD13_05405 023c4cc6782a90c5e623a80bc981ee76 619 Pfam PF02151 UvrB/uvrC motif 217 240 9.9E-8 T 17-10-2018 IPR001943 UVR domain GO:0005515 BJD13_05405 023c4cc6782a90c5e623a80bc981ee76 619 Gene3D G3DSA:3.30.420.340 376 548 3.1E-48 T 17-10-2018 IPR038476 UvrC homology region 2 superfamily BJD13_05405 023c4cc6782a90c5e623a80bc981ee76 619 Hamap MF_00203 UvrABC system protein C [uvrC]. 8 603 26.866 T 17-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 BJD13_05405 023c4cc6782a90c5e623a80bc981ee76 619 SMART SM00465 21 102 1.8E-15 T 17-10-2018 IPR000305 GIY-YIG endonuclease BJD13_05405 023c4cc6782a90c5e623a80bc981ee76 619 Pfam PF01541 GIY-YIG catalytic domain 23 97 5.8E-7 T 17-10-2018 IPR000305 GIY-YIG endonuclease BJD13_05405 023c4cc6782a90c5e623a80bc981ee76 619 SUPERFAMILY SSF47781 519 605 5.4E-19 T 17-10-2018 IPR010994 RuvA domain 2-like BJD13_05405 023c4cc6782a90c5e623a80bc981ee76 619 SUPERFAMILY SSF82771 21 104 2.09E-17 T 17-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 BJD13_05405 023c4cc6782a90c5e623a80bc981ee76 619 SUPERFAMILY SSF46600 193 246 4.58E-12 T 17-10-2018 IPR036876 UVR domain superfamily BJD13_05405 023c4cc6782a90c5e623a80bc981ee76 619 Gene3D G3DSA:1.10.150.20 551 605 1.2E-19 T 17-10-2018 BJD13_15040 0ca2cde0d4c7f156b176125e225bf100 319 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 20 306 3.5E-69 T 17-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme BJD13_15040 0ca2cde0d4c7f156b176125e225bf100 319 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 47 60 - T 17-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 BJD13_15040 0ca2cde0d4c7f156b176125e225bf100 319 SUPERFAMILY SSF53686 9 315 2.49E-79 T 17-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BJD13_15040 0ca2cde0d4c7f156b176125e225bf100 319 Gene3D G3DSA:3.40.50.1100 18 310 2.2E-98 T 17-10-2018 BJD13_15040 0ca2cde0d4c7f156b176125e225bf100 319 Gene3D G3DSA:3.40.50.1100 55 151 2.2E-98 T 17-10-2018 BJD13_03075 fb75141b43df4587ac7f66348963fd9f 449 Gene3D G3DSA:3.40.120.10 176 363 1.1E-59 T 17-10-2018 BJD13_03075 fb75141b43df4587ac7f66348963fd9f 449 Gene3D G3DSA:3.40.120.10 3 155 3.7E-48 T 17-10-2018 BJD13_03075 fb75141b43df4587ac7f66348963fd9f 449 SUPERFAMILY SSF53738 158 259 1.29E-27 T 17-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD13_03075 fb75141b43df4587ac7f66348963fd9f 449 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 7 446 2.3E-191 T 17-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD13_03075 fb75141b43df4587ac7f66348963fd9f 449 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 3 448 44.846 T 17-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD13_03075 fb75141b43df4587ac7f66348963fd9f 449 Gene3D G3DSA:3.40.120.10 259 341 1.1E-59 T 17-10-2018 BJD13_03075 fb75141b43df4587ac7f66348963fd9f 449 SUPERFAMILY SSF55957 360 448 7.19E-17 T 17-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD13_03075 fb75141b43df4587ac7f66348963fd9f 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 236 251 5.6E-12 T 17-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD13_03075 fb75141b43df4587ac7f66348963fd9f 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 176 195 5.6E-12 T 17-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD13_03075 fb75141b43df4587ac7f66348963fd9f 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 97 111 5.6E-12 T 17-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD13_03075 fb75141b43df4587ac7f66348963fd9f 449 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 159 256 4.1E-17 T 17-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD13_03075 fb75141b43df4587ac7f66348963fd9f 449 SUPERFAMILY SSF53738 260 367 8.63E-28 T 17-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD13_03075 fb75141b43df4587ac7f66348963fd9f 449 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 98 107 - T 17-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD13_03075 fb75141b43df4587ac7f66348963fd9f 449 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 4 137 5.2E-43 T 17-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD13_03075 fb75141b43df4587ac7f66348963fd9f 449 SUPERFAMILY SSF53738 3 167 8.63E-47 T 17-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD13_03075 fb75141b43df4587ac7f66348963fd9f 449 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 376 443 1.4E-10 T 17-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD13_03075 fb75141b43df4587ac7f66348963fd9f 449 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 260 368 3.4E-28 T 17-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD13_03075 fb75141b43df4587ac7f66348963fd9f 449 Gene3D G3DSA:3.30.310.50 372 449 3.5E-17 T 17-10-2018 BJD13_21845 eea6223169b498e27a5ad0c4c0e610cb 217 Pfam PF00440 Bacterial regulatory proteins, tetR family 28 74 4.8E-16 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD13_21845 eea6223169b498e27a5ad0c4c0e610cb 217 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 160 214 2.5E-16 T 17-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type BJD13_21845 eea6223169b498e27a5ad0c4c0e610cb 217 SUPERFAMILY SSF48498 93 212 1.87E-6 T 17-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BJD13_21845 eea6223169b498e27a5ad0c4c0e610cb 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 41 1.7E-11 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD13_21845 eea6223169b498e27a5ad0c4c0e610cb 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 49 72 1.7E-11 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD13_21845 eea6223169b498e27a5ad0c4c0e610cb 217 SUPERFAMILY SSF46689 19 84 2.54E-18 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_21845 eea6223169b498e27a5ad0c4c0e610cb 217 Gene3D G3DSA:1.10.357.10 75 216 1.4E-33 T 17-10-2018 BJD13_21845 eea6223169b498e27a5ad0c4c0e610cb 217 Gene3D G3DSA:1.10.10.60 18 73 4.4E-20 T 17-10-2018 BJD13_02500 c8dddef8cdd028f9711bc8cb33c7aac0 487 SMART SM00478 324 480 5.8E-17 T 17-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 BJD13_02500 c8dddef8cdd028f9711bc8cb33c7aac0 487 Pfam PF12833 Helix-turn-helix domain 108 187 7.9E-22 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD13_02500 c8dddef8cdd028f9711bc8cb33c7aac0 487 Gene3D G3DSA:1.10.10.60 81 191 5.3E-23 T 17-10-2018 BJD13_02500 c8dddef8cdd028f9711bc8cb33c7aac0 487 Gene3D G3DSA:3.40.10.10 2 75 1.1E-26 T 17-10-2018 IPR035451 Ada-like domain superfamily BJD13_02500 c8dddef8cdd028f9711bc8cb33c7aac0 487 SMART SM00342 102 185 1.9E-19 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD13_02500 c8dddef8cdd028f9711bc8cb33c7aac0 487 Pfam PF06029 AlkA N-terminal domain 197 314 2.1E-36 T 17-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal BJD13_02500 c8dddef8cdd028f9711bc8cb33c7aac0 487 Gene3D G3DSA:1.10.340.30 315 430 1.9E-32 T 17-10-2018 BJD13_02500 c8dddef8cdd028f9711bc8cb33c7aac0 487 SUPERFAMILY SSF55945 197 294 1.73E-26 T 17-10-2018 BJD13_02500 c8dddef8cdd028f9711bc8cb33c7aac0 487 Gene3D G3DSA:1.10.1670.10 432 484 3.9E-13 T 17-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 BJD13_02500 c8dddef8cdd028f9711bc8cb33c7aac0 487 SUPERFAMILY SSF57884 3 84 9.81E-31 T 17-10-2018 IPR035451 Ada-like domain superfamily BJD13_02500 c8dddef8cdd028f9711bc8cb33c7aac0 487 SUPERFAMILY SSF46689 139 188 2.69E-10 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_02500 c8dddef8cdd028f9711bc8cb33c7aac0 487 SUPERFAMILY SSF46689 87 133 3.23E-5 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_02500 c8dddef8cdd028f9711bc8cb33c7aac0 487 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 320 467 9.9E-10 T 17-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 BJD13_02500 c8dddef8cdd028f9711bc8cb33c7aac0 487 SUPERFAMILY SSF48150 303 479 4.36E-45 T 17-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 BJD13_02500 c8dddef8cdd028f9711bc8cb33c7aac0 487 Pfam PF02805 Metal binding domain of Ada 11 74 3.0E-27 T 17-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 BJD13_02500 c8dddef8cdd028f9711bc8cb33c7aac0 487 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 139 181 - T 17-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 BJD13_02500 c8dddef8cdd028f9711bc8cb33c7aac0 487 Gene3D G3DSA:3.30.310.20 197 314 3.4E-31 T 17-10-2018 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily BJD13_02500 c8dddef8cdd028f9711bc8cb33c7aac0 487 SMART SM01009 197 314 8.9E-53 T 17-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal BJD13_14035 df73f594847c888941c0d563d896298d 306 SUPERFAMILY SSF55048 124 185 9.94E-9 T 17-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding BJD13_14035 df73f594847c888941c0d563d896298d 306 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 306 7.1E-17 T 17-10-2018 IPR020801 Polyketide synthase, acyl transferase domain BJD13_14035 df73f594847c888941c0d563d896298d 306 Gene3D G3DSA:3.30.70.250 121 185 6.0E-57 T 17-10-2018 BJD13_14035 df73f594847c888941c0d563d896298d 306 TIGRFAM TIGR03131 malonate_mdcH: malonate decarboxylase, epsilon subunit 4 298 2.9E-103 T 17-10-2018 IPR017554 Malonate decarboxylase, McdH subunit BJD13_14035 df73f594847c888941c0d563d896298d 306 Pfam PF00698 Acyl transferase domain 6 277 4.9E-20 T 17-10-2018 IPR014043 Acyl transferase BJD13_14035 df73f594847c888941c0d563d896298d 306 SUPERFAMILY SSF52151 3 299 2.35E-42 T 17-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase BJD13_14035 df73f594847c888941c0d563d896298d 306 Gene3D G3DSA:3.40.366.10 4 274 6.0E-57 T 17-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 BJD13_22405 1ce6daa9b7a27879c012d5d5e7e9fca1 391 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 17-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD13_22405 1ce6daa9b7a27879c012d5d5e7e9fca1 391 PIRSF PIRSF000724 1 391 1.0E-132 T 17-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD13_22405 1ce6daa9b7a27879c012d5d5e7e9fca1 391 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 388 38.338 T 17-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD13_22405 1ce6daa9b7a27879c012d5d5e7e9fca1 391 Pfam PF00162 Phosphoglycerate kinase 6 378 8.1E-141 T 17-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD13_22405 1ce6daa9b7a27879c012d5d5e7e9fca1 391 PRINTS PR00477 Phosphoglycerate kinase family signature 308 333 2.2E-81 T 17-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD13_22405 1ce6daa9b7a27879c012d5d5e7e9fca1 391 PRINTS PR00477 Phosphoglycerate kinase family signature 341 352 2.2E-81 T 17-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD13_22405 1ce6daa9b7a27879c012d5d5e7e9fca1 391 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 2.2E-81 T 17-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD13_22405 1ce6daa9b7a27879c012d5d5e7e9fca1 391 PRINTS PR00477 Phosphoglycerate kinase family signature 364 381 2.2E-81 T 17-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD13_22405 1ce6daa9b7a27879c012d5d5e7e9fca1 391 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 2.2E-81 T 17-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD13_22405 1ce6daa9b7a27879c012d5d5e7e9fca1 391 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 2.2E-81 T 17-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD13_22405 1ce6daa9b7a27879c012d5d5e7e9fca1 391 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 2.2E-81 T 17-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD13_22405 1ce6daa9b7a27879c012d5d5e7e9fca1 391 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 2.2E-81 T 17-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD13_22405 1ce6daa9b7a27879c012d5d5e7e9fca1 391 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 2.2E-81 T 17-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD13_22405 1ce6daa9b7a27879c012d5d5e7e9fca1 391 Gene3D G3DSA:3.40.50.1260 165 378 3.0E-147 T 17-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD13_22405 1ce6daa9b7a27879c012d5d5e7e9fca1 391 Gene3D G3DSA:3.40.50.1260 8 386 3.0E-147 T 17-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD13_22405 1ce6daa9b7a27879c012d5d5e7e9fca1 391 SUPERFAMILY SSF53748 3 387 1.77E-144 T 17-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD13_11760 f5e3a9c355495537fd44248622f2dc46 554 SUPERFAMILY SSF75304 40 522 3.66E-122 T 17-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 BJD13_11760 f5e3a9c355495537fd44248622f2dc46 554 Pfam PF01425 Amidase 63 507 6.4E-97 T 17-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 BJD13_11760 f5e3a9c355495537fd44248622f2dc46 554 Gene3D G3DSA:3.90.1300.10 35 533 1.1E-190 T 17-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 BJD13_05625 ab2185297ff896282619495680d4e465 508 Pfam PF05199 GMC oxidoreductase 386 500 2.9E-23 T 17-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 BJD13_05625 ab2185297ff896282619495680d4e465 508 SUPERFAMILY SSF54373 360 436 1.29E-7 T 17-10-2018 BJD13_05625 ab2185297ff896282619495680d4e465 508 Gene3D G3DSA:3.50.50.60 427 508 4.6E-18 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_05625 ab2185297ff896282619495680d4e465 508 Gene3D G3DSA:3.50.50.60 5 165 6.1E-19 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_05625 ab2185297ff896282619495680d4e465 508 Gene3D G3DSA:3.50.50.60 178 315 3.0E-11 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_05625 ab2185297ff896282619495680d4e465 508 Pfam PF00732 GMC oxidoreductase 11 298 9.3E-15 T 17-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 BJD13_05625 ab2185297ff896282619495680d4e465 508 SUPERFAMILY SSF51905 9 507 8.46E-62 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_13605 11b951576a4c71f8b2e2d775af098fc9 304 SUPERFAMILY SSF53850 2 216 1.01E-81 T 17-10-2018 BJD13_13605 11b951576a4c71f8b2e2d775af098fc9 304 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 4 210 1.7E-75 T 17-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BJD13_13605 11b951576a4c71f8b2e2d775af098fc9 304 Gene3D G3DSA:3.40.190.10 4 208 2.4E-81 T 17-10-2018 BJD13_13605 11b951576a4c71f8b2e2d775af098fc9 304 Gene3D G3DSA:3.40.190.10 101 200 2.4E-81 T 17-10-2018 BJD13_13605 11b951576a4c71f8b2e2d775af098fc9 304 PRINTS PR00151 Porphobilinogen deaminase signature 43 63 5.3E-42 T 17-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BJD13_13605 11b951576a4c71f8b2e2d775af098fc9 304 PRINTS PR00151 Porphobilinogen deaminase signature 141 158 5.3E-42 T 17-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BJD13_13605 11b951576a4c71f8b2e2d775af098fc9 304 PRINTS PR00151 Porphobilinogen deaminase signature 228 245 5.3E-42 T 17-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BJD13_13605 11b951576a4c71f8b2e2d775af098fc9 304 PRINTS PR00151 Porphobilinogen deaminase signature 122 139 5.3E-42 T 17-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BJD13_13605 11b951576a4c71f8b2e2d775af098fc9 304 PRINTS PR00151 Porphobilinogen deaminase signature 74 93 5.3E-42 T 17-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BJD13_13605 11b951576a4c71f8b2e2d775af098fc9 304 SUPERFAMILY SSF54782 221 303 1.31E-22 T 17-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BJD13_13605 11b951576a4c71f8b2e2d775af098fc9 304 PIRSF PIRSF001438 1 304 1.3E-112 T 17-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BJD13_13605 11b951576a4c71f8b2e2d775af098fc9 304 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 4 294 4.9E-102 T 17-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BJD13_13605 11b951576a4c71f8b2e2d775af098fc9 304 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 224 293 2.5E-13 T 17-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BJD13_13605 11b951576a4c71f8b2e2d775af098fc9 304 Gene3D G3DSA:3.30.160.40 220 304 2.0E-24 T 17-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BJD13_13605 11b951576a4c71f8b2e2d775af098fc9 304 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 3 295 37.412 T 17-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BJD13_13605 11b951576a4c71f8b2e2d775af098fc9 304 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 229 245 - T 17-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BJD13_03335 f7000f3669b870cfd8644883885770c9 180 Pfam PF12019 Type II transport protein GspH 51 164 5.4E-19 T 17-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 BJD13_03335 f7000f3669b870cfd8644883885770c9 180 SUPERFAMILY SSF54523 15 153 6.59E-17 T 17-10-2018 BJD13_03335 f7000f3669b870cfd8644883885770c9 180 Gene3D G3DSA:3.30.700.10 12 178 6.5E-10 T 17-10-2018 BJD13_03820 d19140e439ec3451c8a79f168702c461 528 Gene3D G3DSA:2.60.120.260 352 510 6.6E-30 T 17-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD13_03820 d19140e439ec3451c8a79f168702c461 528 SUPERFAMILY SSF75005 38 340 6.0E-58 T 17-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily BJD13_03820 d19140e439ec3451c8a79f168702c461 528 Gene3D G3DSA:2.115.10.20 34 347 3.8E-77 T 17-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily BJD13_03820 d19140e439ec3451c8a79f168702c461 528 SUPERFAMILY SSF49785 356 490 1.02E-5 T 17-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD13_03820 d19140e439ec3451c8a79f168702c461 528 Pfam PF04616 Glycosyl hydrolases family 43 46 332 7.7E-38 T 17-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 BJD13_18170 34dc43934fa6c8eecc1b020452f224f4 198 SUPERFAMILY SSF56214 29 75 8.89E-6 T 17-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 BJD13_18170 34dc43934fa6c8eecc1b020452f224f4 198 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 84 171 4.5E-18 T 17-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 BJD13_18170 34dc43934fa6c8eecc1b020452f224f4 198 Gene3D G3DSA:3.90.470.20 84 191 2.8E-22 T 17-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 BJD13_18170 34dc43934fa6c8eecc1b020452f224f4 198 SUPERFAMILY SSF56214 83 193 2.88E-26 T 17-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 BJD13_14705 fe667689348ad43a670fded60cdf00ad 205 Gene3D G3DSA:1.10.357.10 64 188 1.2E-10 T 17-10-2018 BJD13_14705 fe667689348ad43a670fded60cdf00ad 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 65 5.1E-11 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD13_14705 fe667689348ad43a670fded60cdf00ad 205 Gene3D G3DSA:1.10.10.60 14 63 7.5E-14 T 17-10-2018 BJD13_14705 fe667689348ad43a670fded60cdf00ad 205 SUPERFAMILY SSF46689 12 95 1.45E-15 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_14705 fe667689348ad43a670fded60cdf00ad 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 5.9E-5 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD13_14705 fe667689348ad43a670fded60cdf00ad 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 5.9E-5 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD13_14705 fe667689348ad43a670fded60cdf00ad 205 SUPERFAMILY SSF48498 90 184 1.62E-7 T 17-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BJD13_23035 78992c27cc24279a65bbb4f548ff1fef 790 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 40 - T 17-10-2018 IPR010916 TonB box, conserved site BJD13_23035 78992c27cc24279a65bbb4f548ff1fef 790 Gene3D G3DSA:2.40.170.20 173 783 9.9E-64 T 17-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BJD13_23035 78992c27cc24279a65bbb4f548ff1fef 790 SUPERFAMILY SSF56935 33 786 1.43E-109 T 17-10-2018 BJD13_23035 78992c27cc24279a65bbb4f548ff1fef 790 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 168 4.5E-21 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_23035 78992c27cc24279a65bbb4f548ff1fef 790 Gene3D G3DSA:2.170.130.10 29 172 1.2E-34 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_23035 78992c27cc24279a65bbb4f548ff1fef 790 Pfam PF00593 TonB dependent receptor 292 785 3.6E-48 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_21655 e36dd09fc5da33e7f89d222d82ded86d 223 Gene3D G3DSA:3.40.50.150 19 209 1.5E-18 T 17-10-2018 BJD13_21655 e36dd09fc5da33e7f89d222d82ded86d 223 SUPERFAMILY SSF53335 22 202 7.19E-20 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_21655 e36dd09fc5da33e7f89d222d82ded86d 223 Pfam PF08242 Methyltransferase domain 53 149 5.4E-15 T 17-10-2018 IPR013217 Methyltransferase type 12 BJD13_00325 c67cd295f5110bff45553274cfe7d387 333 Pfam PF00107 Zinc-binding dehydrogenase 169 294 1.0E-21 T 17-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 BJD13_00325 c67cd295f5110bff45553274cfe7d387 333 Gene3D G3DSA:3.40.50.720 140 280 4.4E-86 T 17-10-2018 BJD13_00325 c67cd295f5110bff45553274cfe7d387 333 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 85 4.5E-5 T 17-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 BJD13_00325 c67cd295f5110bff45553274cfe7d387 333 Gene3D G3DSA:3.90.180.10 19 322 4.4E-86 T 17-10-2018 BJD13_00325 c67cd295f5110bff45553274cfe7d387 333 SUPERFAMILY SSF51735 134 307 9.17E-37 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_00325 c67cd295f5110bff45553274cfe7d387 333 SMART SM00829 11 330 2.6E-21 T 17-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 BJD13_00325 c67cd295f5110bff45553274cfe7d387 333 SUPERFAMILY SSF50129 1 156 2.52E-30 T 17-10-2018 IPR011032 GroES-like superfamily BJD13_10555 e6b29f84c9bb469395208c098cbf9162 238 SMART SM00448 1 113 6.3E-40 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_10555 e6b29f84c9bb469395208c098cbf9162 238 SUPERFAMILY SSF52172 1 172 1.1E-37 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_10555 e6b29f84c9bb469395208c098cbf9162 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 221 1.5E-15 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD13_10555 e6b29f84c9bb469395208c098cbf9162 238 SMART SM00862 147 221 1.2E-14 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD13_10555 e6b29f84c9bb469395208c098cbf9162 238 Pfam PF00072 Response regulator receiver domain 4 113 1.5E-26 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_10555 e6b29f84c9bb469395208c098cbf9162 238 Gene3D G3DSA:1.10.10.10 125 228 1.2E-20 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_10555 e6b29f84c9bb469395208c098cbf9162 238 Gene3D G3DSA:3.40.50.2300 1 122 6.9E-34 T 17-10-2018 BJD13_14400 cbc3f1f3dde91b6af5e6598b9d088b4c 658 SMART SM00267 239 404 7.1E-6 T 17-10-2018 IPR000160 GGDEF domain BJD13_14400 cbc3f1f3dde91b6af5e6598b9d088b4c 658 SUPERFAMILY SSF52172 112 238 9.68E-33 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_14400 cbc3f1f3dde91b6af5e6598b9d088b4c 658 SUPERFAMILY SSF55073 254 397 3.77E-12 T 17-10-2018 IPR029787 Nucleotide cyclase BJD13_14400 cbc3f1f3dde91b6af5e6598b9d088b4c 658 Gene3D G3DSA:3.40.50.2300 101 247 7.6E-32 T 17-10-2018 BJD13_14400 cbc3f1f3dde91b6af5e6598b9d088b4c 658 SUPERFAMILY SSF141868 418 642 1.57E-36 T 17-10-2018 IPR035919 EAL domain superfamily BJD13_14400 cbc3f1f3dde91b6af5e6598b9d088b4c 658 Pfam PF00563 EAL domain 418 642 5.3E-37 T 17-10-2018 IPR001633 EAL domain BJD13_14400 cbc3f1f3dde91b6af5e6598b9d088b4c 658 Gene3D G3DSA:3.20.20.450 418 653 8.8E-43 T 17-10-2018 IPR035919 EAL domain superfamily BJD13_14400 cbc3f1f3dde91b6af5e6598b9d088b4c 658 SMART SM00052 408 650 2.7E-11 T 17-10-2018 IPR001633 EAL domain BJD13_14400 cbc3f1f3dde91b6af5e6598b9d088b4c 658 SMART SM00448 114 227 1.9E-29 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_14400 cbc3f1f3dde91b6af5e6598b9d088b4c 658 Gene3D G3DSA:3.30.70.270 252 417 2.0E-15 T 17-10-2018 BJD13_14400 cbc3f1f3dde91b6af5e6598b9d088b4c 658 Pfam PF00072 Response regulator receiver domain 116 227 2.9E-22 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_14400 cbc3f1f3dde91b6af5e6598b9d088b4c 658 Pfam PF00990 Diguanylate cyclase, GGDEF domain 254 391 2.6E-7 T 17-10-2018 IPR000160 GGDEF domain BJD13_20815 376535891d7e893ac1cb668674545eee 231 SUPERFAMILY SSF161098 20 220 1.31E-40 T 17-10-2018 IPR035906 MetI-like superfamily BJD13_20815 376535891d7e893ac1cb668674545eee 231 Gene3D G3DSA:1.10.3720.10 23 230 1.5E-42 T 17-10-2018 IPR035906 MetI-like superfamily BJD13_20815 376535891d7e893ac1cb668674545eee 231 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 56 231 1.2E-20 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD13_14890 3ec7aa35b3c93565814a6473cfd19849 151 Pfam PF09613 Bacterial type III secretion protein (HrpB1_HrpK) 2 124 3.2E-44 T 17-10-2018 IPR013394 Type III secretion system, HrpB1/HrpK BJD13_14890 3ec7aa35b3c93565814a6473cfd19849 151 TIGRFAM TIGR02561 HrpB1_HrpK: type III secretion protein HrpB1/HrpK 2 145 1.7E-58 T 17-10-2018 IPR013394 Type III secretion system, HrpB1/HrpK BJD13_16275 6eed7bd91dbd9ac55b59a66c0065ba27 382 Pfam PF00248 Aldo/keto reductase family 61 367 2.2E-43 T 17-10-2018 IPR023210 NADP-dependent oxidoreductase domain BJD13_16275 6eed7bd91dbd9ac55b59a66c0065ba27 382 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 27 8.5E-5 T 17-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal BJD13_16275 6eed7bd91dbd9ac55b59a66c0065ba27 382 Gene3D G3DSA:3.20.20.100 57 367 1.6E-58 T 17-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BJD13_16275 6eed7bd91dbd9ac55b59a66c0065ba27 382 SUPERFAMILY SSF51430 60 368 8.51E-56 T 17-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BJD13_18260 7de3d9b01bd42502696f9af22af8c2fe 472 SUPERFAMILY SSF56024 105 301 9.68E-47 T 17-10-2018 BJD13_18260 7de3d9b01bd42502696f9af22af8c2fe 472 Pfam PF13091 PLD-like domain 130 271 2.1E-19 T 17-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 BJD13_18260 7de3d9b01bd42502696f9af22af8c2fe 472 Pfam PF13091 PLD-like domain 315 435 5.4E-23 T 17-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 BJD13_18260 7de3d9b01bd42502696f9af22af8c2fe 472 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 18 469 6.8E-99 T 17-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 BJD13_18260 7de3d9b01bd42502696f9af22af8c2fe 472 Gene3D G3DSA:3.30.870.10 293 470 8.0E-25 T 17-10-2018 BJD13_18260 7de3d9b01bd42502696f9af22af8c2fe 472 Pfam PF13396 Phospholipase_D-nuclease N-terminal 25 57 1.4E-4 T 17-10-2018 IPR027379 Cardiolipin synthase N-terminal BJD13_18260 7de3d9b01bd42502696f9af22af8c2fe 472 SUPERFAMILY SSF56024 263 459 6.28E-46 T 17-10-2018 BJD13_18260 7de3d9b01bd42502696f9af22af8c2fe 472 Gene3D G3DSA:3.30.870.10 112 292 2.4E-34 T 17-10-2018 BJD13_18260 7de3d9b01bd42502696f9af22af8c2fe 472 SMART SM00155 214 241 0.0067 T 17-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 BJD13_18260 7de3d9b01bd42502696f9af22af8c2fe 472 SMART SM00155 385 412 1.1 T 17-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 BJD13_02540 1191a9f01fec16bc2adf164e17e1567c 163 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 9 163 3.8E-24 T 17-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BJD13_02540 1191a9f01fec16bc2adf164e17e1567c 163 Pfam PF04542 Sigma-70 region 2 12 78 1.8E-14 T 17-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BJD13_02540 1191a9f01fec16bc2adf164e17e1567c 163 Pfam PF08281 Sigma-70, region 4 109 158 3.0E-10 T 17-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BJD13_02540 1191a9f01fec16bc2adf164e17e1567c 163 Gene3D G3DSA:1.10.1740.10 3 78 6.9E-17 T 17-10-2018 BJD13_02540 1191a9f01fec16bc2adf164e17e1567c 163 SUPERFAMILY SSF88659 88 162 8.29E-9 T 17-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BJD13_02540 1191a9f01fec16bc2adf164e17e1567c 163 SUPERFAMILY SSF88946 8 89 2.83E-20 T 17-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BJD13_02540 1191a9f01fec16bc2adf164e17e1567c 163 Gene3D G3DSA:1.10.10.10 89 163 3.8E-10 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_14740 f26ac194f02951982cad20846d233b6f 720 Pfam PF00128 Alpha amylase, catalytic domain 200 306 1.3E-7 T 17-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BJD13_14740 f26ac194f02951982cad20846d233b6f 720 Gene3D G3DSA:2.60.40.1180 599 710 2.0E-16 T 17-10-2018 IPR013780 Glycosyl hydrolase, all-beta BJD13_14740 f26ac194f02951982cad20846d233b6f 720 Gene3D G3DSA:3.20.20.80 150 592 2.6E-179 T 17-10-2018 BJD13_14740 f26ac194f02951982cad20846d233b6f 720 SUPERFAMILY SSF81296 15 160 7.56E-49 T 17-10-2018 IPR014756 Immunoglobulin E-set BJD13_14740 f26ac194f02951982cad20846d233b6f 720 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 15 701 0.0 T 17-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 BJD13_14740 f26ac194f02951982cad20846d233b6f 720 SUPERFAMILY SSF51445 147 585 6.34E-131 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily BJD13_14740 f26ac194f02951982cad20846d233b6f 720 Gene3D G3DSA:2.60.40.10 3 149 1.1E-52 T 17-10-2018 IPR013783 Immunoglobulin-like fold BJD13_14740 f26ac194f02951982cad20846d233b6f 720 SMART SM00642 190 578 4.3E-6 T 17-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BJD13_14740 f26ac194f02951982cad20846d233b6f 720 SUPERFAMILY SSF51011 598 701 1.37E-19 T 17-10-2018 BJD13_14740 f26ac194f02951982cad20846d233b6f 720 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 19 106 5.8E-21 T 17-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 BJD13_15990 23a57be186bb9a9e4e7c1864ea55e3fb 431 PIRSF PIRSF000429 6 431 5.2E-103 T 17-10-2018 IPR002155 Thiolase GO:0016747 BJD13_15990 23a57be186bb9a9e4e7c1864ea55e3fb 431 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 14 430 1.7E-114 T 17-10-2018 IPR002155 Thiolase GO:0016747 BJD13_15990 23a57be186bb9a9e4e7c1864ea55e3fb 431 Gene3D G3DSA:3.40.47.10 5 431 1.2E-103 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 BJD13_15990 23a57be186bb9a9e4e7c1864ea55e3fb 431 SUPERFAMILY SSF53901 12 288 6.1E-55 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 BJD13_15990 23a57be186bb9a9e4e7c1864ea55e3fb 431 Pfam PF00108 Thiolase, N-terminal domain 12 281 8.4E-54 T 17-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 BJD13_15990 23a57be186bb9a9e4e7c1864ea55e3fb 431 Pfam PF02803 Thiolase, C-terminal domain 290 431 9.5E-32 T 17-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 BJD13_15990 23a57be186bb9a9e4e7c1864ea55e3fb 431 SUPERFAMILY SSF53901 288 431 6.37E-31 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 BJD13_19140 4e2fa65612b03e86f1e474940f115c63 245 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 142 158 1.9E-5 T 17-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BJD13_19140 4e2fa65612b03e86f1e474940f115c63 245 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 188 201 1.9E-5 T 17-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BJD13_19140 4e2fa65612b03e86f1e474940f115c63 245 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 5 16 1.9E-5 T 17-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BJD13_19140 4e2fa65612b03e86f1e474940f115c63 245 Gene3D G3DSA:1.20.120.1600 19 102 4.8E-62 T 17-10-2018 BJD13_19140 4e2fa65612b03e86f1e474940f115c63 245 Gene3D G3DSA:3.40.50.1000 6 220 4.8E-62 T 17-10-2018 IPR023214 HAD superfamily BJD13_19140 4e2fa65612b03e86f1e474940f115c63 245 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 81 199 4.0E-9 T 17-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BJD13_19140 4e2fa65612b03e86f1e474940f115c63 245 SUPERFAMILY SSF56784 5 228 4.81E-46 T 17-10-2018 IPR036412 HAD-like superfamily BJD13_19140 4e2fa65612b03e86f1e474940f115c63 245 Pfam PF13419 Haloacid dehalogenase-like hydrolase 65 199 1.2E-12 T 17-10-2018 BJD13_19140 4e2fa65612b03e86f1e474940f115c63 245 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 88 193 2.1E-13 T 17-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BJD13_06420 f9389f1709f98c9daf62ff22ba55ca0c 407 Gene3D G3DSA:2.60.98.20 151 289 2.9E-32 T 17-10-2018 IPR037058 Flagellar hook protein FlgE superfamily BJD13_06420 f9389f1709f98c9daf62ff22ba55ca0c 407 SUPERFAMILY SSF117143 79 368 5.49E-75 T 17-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like BJD13_06420 f9389f1709f98c9daf62ff22ba55ca0c 407 Pfam PF07559 Flagellar basal body protein FlaE 177 288 6.4E-23 T 17-10-2018 IPR011491 Flagellar hook protein FlgE BJD13_06420 f9389f1709f98c9daf62ff22ba55ca0c 407 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 9 29 - T 17-10-2018 IPR019776 Flagellar basal body rod protein, conserved site BJD13_06420 f9389f1709f98c9daf62ff22ba55ca0c 407 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 328 406 1.3E-19 T 17-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BJD13_06420 f9389f1709f98c9daf62ff22ba55ca0c 407 Pfam PF00460 Flagella basal body rod protein 3 33 1.9E-8 T 17-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 BJD13_06420 f9389f1709f98c9daf62ff22ba55ca0c 407 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 389 3.9E-107 T 17-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G BJD13_21610 839583559821646a78ca292e33d276ac 533 Pfam PF09284 Rhamnogalacturonan lyase B, N-terminal 27 274 3.5E-87 T 17-10-2018 IPR015364 Rhamnogalacturonase B, N-terminal GO:0005975|GO:0016837|GO:0030246 MetaCyc: PWY-6769|MetaCyc: PWY-6771 BJD13_21610 839583559821646a78ca292e33d276ac 533 Gene3D G3DSA:2.60.120.260 362 532 1.8E-60 T 17-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD13_21610 839583559821646a78ca292e33d276ac 533 SUPERFAMILY SSF49452 275 354 2.16E-12 T 17-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 BJD13_21610 839583559821646a78ca292e33d276ac 533 PIRSF PIRSF011794 3 532 1.4E-229 T 17-10-2018 IPR016590 Rhamnogalacturonase B GO:0005975|GO:0016837 MetaCyc: PWY-6769|MetaCyc: PWY-6771 BJD13_21610 839583559821646a78ca292e33d276ac 533 Pfam PF14683 Polysaccharide lyase family 4, domain III 367 530 1.9E-34 T 17-10-2018 IPR029411 Rhamnogalacturonan lyase, domain III MetaCyc: PWY-6769|MetaCyc: PWY-6771 BJD13_21610 839583559821646a78ca292e33d276ac 533 Pfam PF14686 Polysaccharide lyase family 4, domain II 286 352 6.4E-17 T 17-10-2018 IPR029413 Rhamnogalacturonan lyase, domain II MetaCyc: PWY-6769|MetaCyc: PWY-6771 BJD13_21610 839583559821646a78ca292e33d276ac 533 SUPERFAMILY SSF74650 26 271 8.47E-81 T 17-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 BJD13_21610 839583559821646a78ca292e33d276ac 533 Gene3D G3DSA:2.60.40.1120 276 360 2.4E-27 T 17-10-2018 BJD13_21610 839583559821646a78ca292e33d276ac 533 SUPERFAMILY SSF49785 363 531 1.49E-53 T 17-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD13_21610 839583559821646a78ca292e33d276ac 533 Gene3D G3DSA:2.70.98.10 26 275 1.4E-90 T 17-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 BJD13_23055 100097484a1f8f0d755b008fc712f76c 297 SUPERFAMILY SSF56601 35 287 1.84E-74 T 17-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BJD13_23055 100097484a1f8f0d755b008fc712f76c 297 Gene3D G3DSA:3.40.710.10 34 297 1.5E-81 T 17-10-2018 BJD13_23055 100097484a1f8f0d755b008fc712f76c 297 PRINTS PR00118 Beta-lactamase class A signature 148 172 1.6E-63 T 17-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 BJD13_23055 100097484a1f8f0d755b008fc712f76c 297 PRINTS PR00118 Beta-lactamase class A signature 174 199 1.6E-63 T 17-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 BJD13_23055 100097484a1f8f0d755b008fc712f76c 297 PRINTS PR00118 Beta-lactamase class A signature 112 137 1.6E-63 T 17-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 BJD13_23055 100097484a1f8f0d755b008fc712f76c 297 PRINTS PR00118 Beta-lactamase class A signature 227 242 1.6E-63 T 17-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 BJD13_23055 100097484a1f8f0d755b008fc712f76c 297 PRINTS PR00118 Beta-lactamase class A signature 39 63 1.6E-63 T 17-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 BJD13_23055 100097484a1f8f0d755b008fc712f76c 297 PRINTS PR00118 Beta-lactamase class A signature 70 87 1.6E-63 T 17-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 BJD13_23055 100097484a1f8f0d755b008fc712f76c 297 PRINTS PR00118 Beta-lactamase class A signature 210 225 1.6E-63 T 17-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 BJD13_23055 100097484a1f8f0d755b008fc712f76c 297 Pfam PF13354 Beta-lactamase enzyme family 60 260 3.7E-46 T 17-10-2018 BJD13_23055 100097484a1f8f0d755b008fc712f76c 297 ProSitePatterns PS00146 Beta-lactamase class-A active site. 72 87 - T 17-10-2018 IPR023650 Beta-lactamase, class-A active site KEGG: 00311+3.5.2.6 BJD13_11085 1b72c1db9497daf81f2a1f444fb4a836 79 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 76 8.0E-4 T 17-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 BJD13_11085 1b72c1db9497daf81f2a1f444fb4a836 79 Gene3D G3DSA:1.10.1200.10 1 79 2.1E-29 T 17-10-2018 IPR036736 ACP-like superfamily BJD13_11085 1b72c1db9497daf81f2a1f444fb4a836 79 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 17-10-2018 IPR006162 Phosphopantetheine attachment site BJD13_11085 1b72c1db9497daf81f2a1f444fb4a836 79 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 75 4.5E-36 T 17-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 BJD13_11085 1b72c1db9497daf81f2a1f444fb4a836 79 SUPERFAMILY SSF47336 2 77 1.57E-23 T 17-10-2018 IPR036736 ACP-like superfamily BJD13_11085 1b72c1db9497daf81f2a1f444fb4a836 79 Pfam PF00550 Phosphopantetheine attachment site 6 73 3.6E-16 T 17-10-2018 IPR009081 Phosphopantetheine binding ACP domain BJD13_11085 1b72c1db9497daf81f2a1f444fb4a836 79 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.661 T 17-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 BJD13_15525 a27c2993f7c3e0d3ff5a3bec047e632c 310 Gene3D G3DSA:1.10.10.10 11 94 2.4E-22 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_15525 a27c2993f7c3e0d3ff5a3bec047e632c 310 Gene3D G3DSA:3.40.190.10 99 295 2.7E-58 T 17-10-2018 BJD13_15525 a27c2993f7c3e0d3ff5a3bec047e632c 310 SUPERFAMILY SSF46785 12 119 3.29E-18 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_15525 a27c2993f7c3e0d3ff5a3bec047e632c 310 SUPERFAMILY SSF53850 98 302 2.35E-39 T 17-10-2018 BJD13_15525 a27c2993f7c3e0d3ff5a3bec047e632c 310 Pfam PF03466 LysR substrate binding domain 97 300 3.1E-36 T 17-10-2018 IPR005119 LysR, substrate-binding BJD13_15525 a27c2993f7c3e0d3ff5a3bec047e632c 310 Gene3D G3DSA:3.40.190.10 171 271 2.7E-58 T 17-10-2018 BJD13_15525 a27c2993f7c3e0d3ff5a3bec047e632c 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 71 8.1E-16 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_22520 63d276a0e44f1031c818513a62a967b0 1041 Gene3D G3DSA:3.30.70.1430 558 657 0.0 T 17-10-2018 BJD13_22520 63d276a0e44f1031c818513a62a967b0 1041 SUPERFAMILY SSF82866 291 490 1.29E-46 T 17-10-2018 BJD13_22520 63d276a0e44f1031c818513a62a967b0 1041 Gene3D G3DSA:3.30.2090.10 178 269 0.0 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_22520 63d276a0e44f1031c818513a62a967b0 1041 SUPERFAMILY SSF82693 556 653 6.28E-14 T 17-10-2018 BJD13_22520 63d276a0e44f1031c818513a62a967b0 1041 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.2E-76 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_22520 63d276a0e44f1031c818513a62a967b0 1041 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 1.2E-76 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_22520 63d276a0e44f1031c818513a62a967b0 1041 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.2E-76 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_22520 63d276a0e44f1031c818513a62a967b0 1041 PRINTS PR00702 Acriflavin resistance protein family signature 615 629 1.2E-76 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_22520 63d276a0e44f1031c818513a62a967b0 1041 PRINTS PR00702 Acriflavin resistance protein family signature 543 560 1.2E-76 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_22520 63d276a0e44f1031c818513a62a967b0 1041 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.2E-76 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_22520 63d276a0e44f1031c818513a62a967b0 1041 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 1.2E-76 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_22520 63d276a0e44f1031c818513a62a967b0 1041 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.2E-76 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_22520 63d276a0e44f1031c818513a62a967b0 1041 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.2E-76 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_22520 63d276a0e44f1031c818513a62a967b0 1041 Gene3D G3DSA:1.20.1640.10 504 1010 0.0 T 17-10-2018 BJD13_22520 63d276a0e44f1031c818513a62a967b0 1041 SUPERFAMILY SSF82693 40 134 1.52E-22 T 17-10-2018 BJD13_22520 63d276a0e44f1031c818513a62a967b0 1041 Gene3D G3DSA:3.30.70.1440 658 853 0.0 T 17-10-2018 BJD13_22520 63d276a0e44f1031c818513a62a967b0 1041 SUPERFAMILY SSF82714 182 265 4.19E-18 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_22520 63d276a0e44f1031c818513a62a967b0 1041 Gene3D G3DSA:3.30.2090.10 708 796 0.0 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_22520 63d276a0e44f1031c818513a62a967b0 1041 SUPERFAMILY SSF82866 795 1016 3.27E-50 T 17-10-2018 BJD13_22520 63d276a0e44f1031c818513a62a967b0 1041 Gene3D G3DSA:3.30.70.1320 134 326 0.0 T 17-10-2018 BJD13_22520 63d276a0e44f1031c818513a62a967b0 1041 Gene3D G3DSA:3.30.70.1430 40 804 0.0 T 17-10-2018 BJD13_22520 63d276a0e44f1031c818513a62a967b0 1041 SUPERFAMILY SSF82693 136 324 6.8E-22 T 17-10-2018 BJD13_22520 63d276a0e44f1031c818513a62a967b0 1041 Pfam PF00873 AcrB/AcrD/AcrF family 4 1013 1.3E-300 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_22520 63d276a0e44f1031c818513a62a967b0 1041 Gene3D G3DSA:1.20.1640.10 10 503 0.0 T 17-10-2018 BJD13_22520 63d276a0e44f1031c818513a62a967b0 1041 SUPERFAMILY SSF82714 709 793 5.49E-19 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_04815 87a247020969aeec03b9e1869ef93e04 546 Gene3D G3DSA:3.10.290.10 25 80 1.0E-15 T 17-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 BJD13_04815 87a247020969aeec03b9e1869ef93e04 546 SUPERFAMILY SSF55174 26 114 2.94E-16 T 17-10-2018 BJD13_04815 87a247020969aeec03b9e1869ef93e04 546 Pfam PF00849 RNA pseudouridylate synthase 91 226 9.0E-16 T 17-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD13_04815 87a247020969aeec03b9e1869ef93e04 546 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 129 143 - T 17-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 BJD13_04815 87a247020969aeec03b9e1869ef93e04 546 SUPERFAMILY SSF55120 87 259 6.72E-36 T 17-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD13_04815 87a247020969aeec03b9e1869ef93e04 546 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 95 255 7.0E-49 T 17-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 BJD13_04815 87a247020969aeec03b9e1869ef93e04 546 Pfam PF01479 S4 domain 28 73 2.7E-9 T 17-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_04815 87a247020969aeec03b9e1869ef93e04 546 Gene3D G3DSA:3.30.70.580 93 254 6.0E-46 T 17-10-2018 BJD13_04815 87a247020969aeec03b9e1869ef93e04 546 SMART SM00363 28 86 8.9E-10 T 17-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_04815 87a247020969aeec03b9e1869ef93e04 546 Gene3D G3DSA:3.30.70.1560 153 248 6.0E-46 T 17-10-2018 BJD13_11155 acd95130bb3c4d3e81c3991fb6e509e8 116 SUPERFAMILY SSF54197 2 109 1.86E-34 T 17-10-2018 IPR036265 HIT-like superfamily BJD13_11155 acd95130bb3c4d3e81c3991fb6e509e8 116 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 17-10-2018 IPR019808 Histidine triad, conserved site BJD13_11155 acd95130bb3c4d3e81c3991fb6e509e8 116 Pfam PF01230 HIT domain 11 107 4.7E-24 T 17-10-2018 IPR001310 Histidine triad (HIT) protein BJD13_11155 acd95130bb3c4d3e81c3991fb6e509e8 116 PRINTS PR00332 Histidine triad family signature 26 44 8.4E-20 T 17-10-2018 IPR001310 Histidine triad (HIT) protein BJD13_11155 acd95130bb3c4d3e81c3991fb6e509e8 116 PRINTS PR00332 Histidine triad family signature 5 21 8.4E-20 T 17-10-2018 IPR001310 Histidine triad (HIT) protein BJD13_11155 acd95130bb3c4d3e81c3991fb6e509e8 116 PRINTS PR00332 Histidine triad family signature 95 105 8.4E-20 T 17-10-2018 IPR001310 Histidine triad (HIT) protein BJD13_11155 acd95130bb3c4d3e81c3991fb6e509e8 116 Gene3D G3DSA:3.30.428.10 1 110 3.1E-33 T 17-10-2018 IPR036265 HIT-like superfamily BJD13_12250 1258111b9866d1c31afb6e1a6620c349 313 Gene3D G3DSA:1.10.10.10 1 85 2.3E-30 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_12250 1258111b9866d1c31afb6e1a6620c349 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.3E-7 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_12250 1258111b9866d1c31afb6e1a6620c349 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.3E-7 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_12250 1258111b9866d1c31afb6e1a6620c349 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.3E-7 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_12250 1258111b9866d1c31afb6e1a6620c349 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 4.0E-21 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_12250 1258111b9866d1c31afb6e1a6620c349 313 SUPERFAMILY SSF53850 88 295 1.32E-46 T 17-10-2018 BJD13_12250 1258111b9866d1c31afb6e1a6620c349 313 SUPERFAMILY SSF46785 1 111 1.59E-23 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_12250 1258111b9866d1c31afb6e1a6620c349 313 Gene3D G3DSA:3.40.190.10 161 262 3.7E-71 T 17-10-2018 BJD13_12250 1258111b9866d1c31afb6e1a6620c349 313 Gene3D G3DSA:3.40.190.10 91 291 3.7E-71 T 17-10-2018 BJD13_12250 1258111b9866d1c31afb6e1a6620c349 313 Pfam PF03466 LysR substrate binding domain 87 292 1.2E-50 T 17-10-2018 IPR005119 LysR, substrate-binding BJD13_17605 6c23c288eb5c64cb59ce8f78d9ffb40c 1012 Pfam PF00593 TonB dependent receptor 414 1010 7.8E-23 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_17605 6c23c288eb5c64cb59ce8f78d9ffb40c 1012 SUPERFAMILY SSF49452 31 99 3.53E-7 T 17-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 BJD13_17605 6c23c288eb5c64cb59ce8f78d9ffb40c 1012 Pfam PF13620 Carboxypeptidase regulatory-like domain 47 103 3.3E-7 T 17-10-2018 BJD13_17605 6c23c288eb5c64cb59ce8f78d9ffb40c 1012 SUPERFAMILY SSF56935 117 1009 4.4E-58 T 17-10-2018 BJD13_03405 fea6d2d97e5168d0a299237a5f78a7cf 817 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 171 376 1.1E-48 T 17-10-2018 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 BJD13_03405 fea6d2d97e5168d0a299237a5f78a7cf 817 SUPERFAMILY SSF52540 385 727 4.39E-37 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_03405 fea6d2d97e5168d0a299237a5f78a7cf 817 TIGRFAM TIGR00929 VirB4_CagE: type IV secretion/conjugal transfer ATPase, VirB4 family 6 798 2.0E-220 T 17-10-2018 IPR004346 CagE, TrbE, VirB component of type IV transporter system GO:0005524 BJD13_03405 fea6d2d97e5168d0a299237a5f78a7cf 817 SMART SM00382 437 702 0.0054 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_23465 b25e344dc203fce27f1357c076f72e14 602 Gene3D G3DSA:3.40.50.410 233 408 2.3E-31 T 17-10-2018 IPR036465 von Willebrand factor A-like domain superfamily BJD13_23465 b25e344dc203fce27f1357c076f72e14 602 Pfam PF12450 von Willebrand factor 125 217 3.4E-39 T 17-10-2018 IPR022156 Uncharacterised protein YfbK, N-terminal BJD13_23465 b25e344dc203fce27f1357c076f72e14 602 SMART SM00327 232 408 7.0E-29 T 17-10-2018 IPR002035 von Willebrand factor, type A BJD13_23465 b25e344dc203fce27f1357c076f72e14 602 Pfam PF12034 Domain of unknown function (DUF3520) 410 592 4.8E-70 T 17-10-2018 IPR021908 Protein of unknown function DUF3520 BJD13_23465 b25e344dc203fce27f1357c076f72e14 602 SUPERFAMILY SSF53300 231 404 9.82E-35 T 17-10-2018 IPR036465 von Willebrand factor A-like domain superfamily BJD13_23465 b25e344dc203fce27f1357c076f72e14 602 Pfam PF00092 von Willebrand factor type A domain 234 398 4.8E-19 T 17-10-2018 IPR002035 von Willebrand factor, type A BJD13_21135 85156cd0ad493de4e849cce90b4923a0 280 Pfam PF01061 ABC-2 type transporter 30 239 9.8E-25 T 17-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 BJD13_21135 85156cd0ad493de4e849cce90b4923a0 280 PRINTS PR00164 ABC-2 type transport system membrane protein signature 198 217 2.9E-5 T 17-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 BJD13_21135 85156cd0ad493de4e849cce90b4923a0 280 PRINTS PR00164 ABC-2 type transport system membrane protein signature 49 70 2.9E-5 T 17-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 BJD13_08780 1c675640138a6017843ff64d9042069e 157 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 29 108 2.2E-19 T 17-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 BJD13_08780 1c675640138a6017843ff64d9042069e 157 SUPERFAMILY SSF51316 6 130 1.15E-40 T 17-10-2018 IPR011057 Mss4-like superfamily BJD13_08780 1c675640138a6017843ff64d9042069e 157 Gene3D G3DSA:2.170.150.70 7 112 4.5E-14 T 17-10-2018 BJD13_04695 bfb4efdb61a00d74d9834ebd13f82872 803 Gene3D G3DSA:1.50.10.10 121 774 1.0E-156 T 17-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 BJD13_04695 bfb4efdb61a00d74d9834ebd13f82872 803 Gene3D G3DSA:2.70.98.50 127 315 1.0E-156 T 17-10-2018 BJD13_04695 bfb4efdb61a00d74d9834ebd13f82872 803 PIRSF PIRSF007663 37 802 4.4E-183 T 17-10-2018 IPR016518 Alpha-L-fucosidase GO:0004560 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807 BJD13_04695 bfb4efdb61a00d74d9834ebd13f82872 803 Gene3D G3DSA:2.60.40.1180 316 787 1.0E-156 T 17-10-2018 IPR013780 Glycosyl hydrolase, all-beta BJD13_04695 bfb4efdb61a00d74d9834ebd13f82872 803 Pfam PF14498 Glycosyl hydrolase family 65, N-terminal domain 118 269 7.6E-26 T 17-10-2018 IPR027414 Glycosyl hydrolase family 95, N-terminal domain KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807 BJD13_04695 bfb4efdb61a00d74d9834ebd13f82872 803 Pfam PF14498 Glycosyl hydrolase family 65, N-terminal domain 60 112 3.6E-11 T 17-10-2018 IPR027414 Glycosyl hydrolase family 95, N-terminal domain KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807 BJD13_04695 bfb4efdb61a00d74d9834ebd13f82872 803 SUPERFAMILY SSF48208 277 785 5.35E-59 T 17-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 BJD13_09980 e2a9a5444f1c38efb4aaa5aad757d67f 299 Pfam PF07650 KH domain 211 286 9.4E-20 T 17-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_09980 e2a9a5444f1c38efb4aaa5aad757d67f 299 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 13 33 1.3E-6 T 17-10-2018 IPR006073 GTP binding domain GO:0005525 BJD13_09980 e2a9a5444f1c38efb4aaa5aad757d67f 299 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 62 77 1.3E-6 T 17-10-2018 IPR006073 GTP binding domain GO:0005525 BJD13_09980 e2a9a5444f1c38efb4aaa5aad757d67f 299 Gene3D G3DSA:3.30.300.20 188 299 2.6E-39 T 17-10-2018 IPR015946 K homology domain-like, alpha/beta BJD13_09980 e2a9a5444f1c38efb4aaa5aad757d67f 299 Hamap MF_00367 GTPase Era [era]. 8 298 34.491 T 17-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_09980 e2a9a5444f1c38efb4aaa5aad757d67f 299 SUPERFAMILY SSF52540 13 207 4.76E-43 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_09980 e2a9a5444f1c38efb4aaa5aad757d67f 299 SUPERFAMILY SSF54814 184 299 2.75E-38 T 17-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 BJD13_09980 e2a9a5444f1c38efb4aaa5aad757d67f 299 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 12 169 7.6E-28 T 17-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BJD13_09980 e2a9a5444f1c38efb4aaa5aad757d67f 299 TIGRFAM TIGR00436 era: GTP-binding protein Era 12 281 1.2E-76 T 17-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_09980 e2a9a5444f1c38efb4aaa5aad757d67f 299 Gene3D G3DSA:3.40.50.300 6 186 8.0E-48 T 17-10-2018 BJD13_09980 e2a9a5444f1c38efb4aaa5aad757d67f 299 Pfam PF01926 50S ribosome-binding GTPase 13 127 2.1E-23 T 17-10-2018 IPR006073 GTP binding domain GO:0005525 BJD13_06100 bcfda59f37041a27f87abb8754028258 817 SUPERFAMILY SSF51905 2 192 1.37E-46 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_06100 bcfda59f37041a27f87abb8754028258 817 Gene3D G3DSA:3.50.50.60 110 246 6.4E-92 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_06100 bcfda59f37041a27f87abb8754028258 817 Pfam PF04324 BFD-like [2Fe-2S] binding domain 423 470 1.5E-13 T 17-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain BJD13_06100 bcfda59f37041a27f87abb8754028258 817 Pfam PF04324 BFD-like [2Fe-2S] binding domain 487 536 9.7E-14 T 17-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain BJD13_06100 bcfda59f37041a27f87abb8754028258 817 Gene3D G3DSA:3.30.390.30 318 386 7.4E-7 T 17-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 BJD13_06100 bcfda59f37041a27f87abb8754028258 817 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 562 623 5.3E-12 T 17-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BJD13_06100 bcfda59f37041a27f87abb8754028258 817 SUPERFAMILY SSF55124 520 628 2.45E-23 T 17-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BJD13_06100 bcfda59f37041a27f87abb8754028258 817 Gene3D G3DSA:3.30.413.10 631 782 2.0E-32 T 17-10-2018 BJD13_06100 bcfda59f37041a27f87abb8754028258 817 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 281 7.3E-20 T 17-10-2018 BJD13_06100 bcfda59f37041a27f87abb8754028258 817 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 7.3E-20 T 17-10-2018 BJD13_06100 bcfda59f37041a27f87abb8754028258 817 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 7.3E-20 T 17-10-2018 BJD13_06100 bcfda59f37041a27f87abb8754028258 817 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 7.3E-20 T 17-10-2018 BJD13_06100 bcfda59f37041a27f87abb8754028258 817 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 7.3E-20 T 17-10-2018 BJD13_06100 bcfda59f37041a27f87abb8754028258 817 Gene3D G3DSA:3.50.50.60 7 281 6.4E-92 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_06100 bcfda59f37041a27f87abb8754028258 817 Gene3D G3DSA:1.10.10.1100 422 476 5.7E-9 T 17-10-2018 BJD13_06100 bcfda59f37041a27f87abb8754028258 817 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 679 695 - T 17-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BJD13_06100 bcfda59f37041a27f87abb8754028258 817 PIRSF PIRSF037149 1 817 0.0 T 17-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 BJD13_06100 bcfda59f37041a27f87abb8754028258 817 SUPERFAMILY SSF51905 143 310 1.3E-29 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_06100 bcfda59f37041a27f87abb8754028258 817 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 4.1E-12 T 17-10-2018 BJD13_06100 bcfda59f37041a27f87abb8754028258 817 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 4.1E-12 T 17-10-2018 BJD13_06100 bcfda59f37041a27f87abb8754028258 817 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 4.1E-12 T 17-10-2018 BJD13_06100 bcfda59f37041a27f87abb8754028258 817 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 274 281 4.1E-12 T 17-10-2018 BJD13_06100 bcfda59f37041a27f87abb8754028258 817 SUPERFAMILY SSF56014 633 796 4.84E-47 T 17-10-2018 BJD13_06100 bcfda59f37041a27f87abb8754028258 817 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 632 767 8.5E-24 T 17-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BJD13_06100 bcfda59f37041a27f87abb8754028258 817 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 793 6.5E-278 T 17-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 BJD13_06100 bcfda59f37041a27f87abb8754028258 817 PRINTS PR00397 Sirohaem Fe-binding site signature 636 654 1.5E-6 T 17-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BJD13_06100 bcfda59f37041a27f87abb8754028258 817 PRINTS PR00397 Sirohaem Fe-binding site signature 679 697 1.5E-6 T 17-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BJD13_06100 bcfda59f37041a27f87abb8754028258 817 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 283 1.1E-54 T 17-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BJD13_21670 8a4b3319a625ad8e5f9272233e9b21de 363 Gene3D G3DSA:3.40.50.300 99 269 1.4E-44 T 17-10-2018 BJD13_21670 8a4b3319a625ad8e5f9272233e9b21de 363 Pfam PF03193 RsgA GTPase 96 269 2.0E-47 T 17-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 BJD13_21670 8a4b3319a625ad8e5f9272233e9b21de 363 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 87 326 5.1E-44 T 17-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 BJD13_21670 8a4b3319a625ad8e5f9272233e9b21de 363 Gene3D G3DSA:1.10.40.50 272 343 3.9E-20 T 17-10-2018 BJD13_21670 8a4b3319a625ad8e5f9272233e9b21de 363 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 38 334 31.395 T 17-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 BJD13_21670 8a4b3319a625ad8e5f9272233e9b21de 363 SUPERFAMILY SSF52540 113 326 7.51E-47 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_11340 940ecf0fe1d70d9c97d2193857459f6d 165 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 10 159 2.1E-51 T 17-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BJD13_11340 940ecf0fe1d70d9c97d2193857459f6d 165 SUPERFAMILY SSF55040 18 160 5.36E-48 T 17-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BJD13_11340 940ecf0fe1d70d9c97d2193857459f6d 165 Pfam PF01967 MoaC family 21 157 2.8E-48 T 17-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BJD13_11340 940ecf0fe1d70d9c97d2193857459f6d 165 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 8 165 31.443 T 17-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BJD13_11340 940ecf0fe1d70d9c97d2193857459f6d 165 Gene3D G3DSA:3.30.70.640 7 164 4.8E-57 T 17-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BJD13_10040 f3e41ae5d0cf32b1ce298761e08ceafa 265 SUPERFAMILY SSF52096 12 265 1.12E-78 T 17-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BJD13_10040 f3e41ae5d0cf32b1ce298761e08ceafa 265 Gene3D G3DSA:1.10.12.10 208 263 1.6E-15 T 17-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal BJD13_10040 f3e41ae5d0cf32b1ce298761e08ceafa 265 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 17-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 BJD13_10040 f3e41ae5d0cf32b1ce298761e08ceafa 265 Gene3D G3DSA:3.90.226.10 5 205 1.3E-62 T 17-10-2018 BJD13_10040 f3e41ae5d0cf32b1ce298761e08ceafa 265 Pfam PF00378 Enoyl-CoA hydratase/isomerase 17 264 1.2E-55 T 17-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 BJD13_02735 991de272f2b702a11372f28d2f817ffe 289 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 74 282 4.5E-45 T 17-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 BJD13_02735 991de272f2b702a11372f28d2f817ffe 289 Gene3D G3DSA:3.40.50.620 69 283 3.6E-56 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD13_02735 991de272f2b702a11372f28d2f817ffe 289 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 69 283 27.473 T 17-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 BJD13_02735 991de272f2b702a11372f28d2f817ffe 289 SUPERFAMILY SSF52374 72 285 7.51E-46 T 17-10-2018 BJD13_02735 991de272f2b702a11372f28d2f817ffe 289 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 73 131 1.4E-8 T 17-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 BJD13_02735 991de272f2b702a11372f28d2f817ffe 289 Pfam PF01467 Cytidylyltransferase-like 73 256 1.0E-26 T 17-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 BJD13_08830 865e79877c9d58577db70611dd4280ff 917 Gene3D G3DSA:3.40.50.280 412 564 2.9E-54 T 17-10-2018 BJD13_08830 865e79877c9d58577db70611dd4280ff 917 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 608 897 4.9E-123 T 17-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BJD13_08830 865e79877c9d58577db70611dd4280ff 917 Gene3D G3DSA:1.10.288.10 606 782 1.1E-135 T 17-10-2018 BJD13_08830 865e79877c9d58577db70611dd4280ff 917 TIGRFAM TIGR02082 metH: methionine synthase 4 882 0.0 T 17-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BJD13_08830 865e79877c9d58577db70611dd4280ff 917 Gene3D G3DSA:3.10.196.10 577 912 1.1E-135 T 17-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BJD13_08830 865e79877c9d58577db70611dd4280ff 917 Pfam PF02607 B12 binding domain 325 397 5.7E-26 T 17-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BJD13_08830 865e79877c9d58577db70611dd4280ff 917 SUPERFAMILY SSF51717 23 297 1.31E-87 T 17-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BJD13_08830 865e79877c9d58577db70611dd4280ff 917 SUPERFAMILY SSF47644 317 404 3.4E-28 T 17-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BJD13_08830 865e79877c9d58577db70611dd4280ff 917 SUPERFAMILY SSF56507 571 917 3.4E-129 T 17-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BJD13_08830 865e79877c9d58577db70611dd4280ff 917 SUPERFAMILY SSF52242 413 563 8.63E-44 T 17-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 BJD13_08830 865e79877c9d58577db70611dd4280ff 917 Gene3D G3DSA:3.20.20.20 7 310 4.6E-130 T 17-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BJD13_08830 865e79877c9d58577db70611dd4280ff 917 Pfam PF02310 B12 binding domain 417 508 1.5E-19 T 17-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 BJD13_08830 865e79877c9d58577db70611dd4280ff 917 SMART SM01018 322 405 1.0E-43 T 17-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BJD13_08830 865e79877c9d58577db70611dd4280ff 917 Pfam PF00809 Pterin binding enzyme 27 265 1.0E-60 T 17-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BJD13_08830 865e79877c9d58577db70611dd4280ff 917 PIRSF PIRSF000381 1 885 0.0 T 17-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BJD13_08830 865e79877c9d58577db70611dd4280ff 917 Gene3D G3DSA:1.10.1240.10 314 402 1.5E-38 T 17-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BJD13_22735 a361daacd9f13fb57d6a339c78acdc23 578 Gene3D G3DSA:3.30.450.90 167 301 7.1E-48 T 17-10-2018 BJD13_22735 a361daacd9f13fb57d6a339c78acdc23 578 Gene3D G3DSA:3.40.50.300 303 578 3.7E-103 T 17-10-2018 BJD13_22735 a361daacd9f13fb57d6a339c78acdc23 578 Pfam PF00437 Type II/IV secretion system protein 201 468 3.5E-88 T 17-10-2018 IPR001482 Type II/IV secretion system protein BJD13_22735 a361daacd9f13fb57d6a339c78acdc23 578 Gene3D G3DSA:3.30.300.160 69 149 3.6E-8 T 17-10-2018 BJD13_22735 a361daacd9f13fb57d6a339c78acdc23 578 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 396 410 - T 17-10-2018 IPR001482 Type II/IV secretion system protein BJD13_22735 a361daacd9f13fb57d6a339c78acdc23 578 SUPERFAMILY SSF52540 190 576 2.88E-97 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_22735 a361daacd9f13fb57d6a339c78acdc23 578 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 49 152 1.2E-19 T 17-10-2018 IPR007831 General secretory system II, protein E, N-terminal BJD13_22735 a361daacd9f13fb57d6a339c78acdc23 578 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 15 578 8.7E-267 T 17-10-2018 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 BJD13_22735 a361daacd9f13fb57d6a339c78acdc23 578 SUPERFAMILY SSF160246 11 148 3.66E-33 T 17-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily BJD13_00005 6d7b59cb98ca016207958b1f19d48f81 977 Pfam PF00176 SNF2 family N-terminal domain 560 753 9.8E-13 T 17-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 BJD13_00005 6d7b59cb98ca016207958b1f19d48f81 977 Pfam PF05175 Methyltransferase small domain 31 110 6.0E-5 T 17-10-2018 IPR007848 Methyltransferase small domain GO:0008168 BJD13_00005 6d7b59cb98ca016207958b1f19d48f81 977 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 35 49 1.9E-5 T 17-10-2018 BJD13_00005 6d7b59cb98ca016207958b1f19d48f81 977 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 95 107 1.9E-5 T 17-10-2018 BJD13_00005 6d7b59cb98ca016207958b1f19d48f81 977 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 2 18 1.9E-5 T 17-10-2018 BJD13_00005 6d7b59cb98ca016207958b1f19d48f81 977 Gene3D G3DSA:3.40.50.150 1 170 7.9E-13 T 17-10-2018 BJD13_00005 6d7b59cb98ca016207958b1f19d48f81 977 Gene3D G3DSA:3.40.50.10810 477 643 2.2E-15 T 17-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily BJD13_00005 6d7b59cb98ca016207958b1f19d48f81 977 Pfam PF00271 Helicase conserved C-terminal domain 815 921 1.9E-6 T 17-10-2018 IPR001650 Helicase, C-terminal BJD13_00005 6d7b59cb98ca016207958b1f19d48f81 977 SMART SM00487 471 650 2.9E-7 T 17-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BJD13_00005 6d7b59cb98ca016207958b1f19d48f81 977 SUPERFAMILY SSF53335 3 195 4.51E-15 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_00005 6d7b59cb98ca016207958b1f19d48f81 977 SUPERFAMILY SSF52540 475 721 1.48E-18 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_00005 6d7b59cb98ca016207958b1f19d48f81 977 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 98 104 - T 17-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 BJD13_00005 6d7b59cb98ca016207958b1f19d48f81 977 SUPERFAMILY SSF52540 583 959 2.15E-27 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_00005 6d7b59cb98ca016207958b1f19d48f81 977 Gene3D G3DSA:3.40.50.300 749 972 1.7E-19 T 17-10-2018 BJD13_00005 6d7b59cb98ca016207958b1f19d48f81 977 SMART SM00490 840 923 7.1E-5 T 17-10-2018 IPR001650 Helicase, C-terminal BJD13_19095 32185a06816f0782b18fa883eacbae6c 414 Gene3D G3DSA:2.40.30.170 248 322 2.9E-48 T 17-10-2018 BJD13_19095 32185a06816f0782b18fa883eacbae6c 414 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 81 318 1.5E-19 T 17-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BJD13_19095 32185a06816f0782b18fa883eacbae6c 414 Gene3D G3DSA:1.10.287.470 129 195 2.9E-48 T 17-10-2018 BJD13_19095 32185a06816f0782b18fa883eacbae6c 414 Gene3D G3DSA:2.40.50.100 83 247 2.9E-48 T 17-10-2018 BJD13_19095 32185a06816f0782b18fa883eacbae6c 414 SUPERFAMILY SSF111369 74 323 2.62E-24 T 17-10-2018 BJD13_19095 32185a06816f0782b18fa883eacbae6c 414 Gene3D G3DSA:2.40.420.20 331 413 7.1E-12 T 17-10-2018 BJD13_19095 32185a06816f0782b18fa883eacbae6c 414 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 62 407 4.8E-53 T 17-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 BJD13_07430 2699e66cb615011f391d404f3a0dcd4a 716 Gene3D G3DSA:3.40.50.300 403 513 4.1E-17 T 17-10-2018 BJD13_07430 2699e66cb615011f391d404f3a0dcd4a 716 Pfam PF13245 AAA domain 27 488 4.2E-14 T 17-10-2018 BJD13_07430 2699e66cb615011f391d404f3a0dcd4a 716 Gene3D G3DSA:3.40.50.300 9 172 3.5E-18 T 17-10-2018 BJD13_07430 2699e66cb615011f391d404f3a0dcd4a 716 Gene3D G3DSA:3.40.50.300 519 704 1.6E-14 T 17-10-2018 BJD13_07430 2699e66cb615011f391d404f3a0dcd4a 716 Pfam PF13361 UvrD-like helicase C-terminal domain 628 698 2.7E-6 T 17-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 BJD13_07430 2699e66cb615011f391d404f3a0dcd4a 716 SUPERFAMILY SSF52540 16 698 3.03E-55 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_10925 9b98f24815541e0b818a1d49dbf146a2 890 Pfam PF11838 ERAP1-like C-terminal domain 560 868 5.2E-42 T 17-10-2018 IPR024571 ERAP1-like C-terminal domain BJD13_10925 9b98f24815541e0b818a1d49dbf146a2 890 Gene3D G3DSA:2.60.40.1910 492 574 7.3E-6 T 17-10-2018 BJD13_10925 9b98f24815541e0b818a1d49dbf146a2 890 SUPERFAMILY SSF55486 248 497 6.74E-71 T 17-10-2018 BJD13_10925 9b98f24815541e0b818a1d49dbf146a2 890 Gene3D G3DSA:1.25.50.20 579 890 2.6E-33 T 17-10-2018 BJD13_10925 9b98f24815541e0b818a1d49dbf146a2 890 Pfam PF01433 Peptidase family M1 domain 249 474 1.1E-74 T 17-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 BJD13_10925 9b98f24815541e0b818a1d49dbf146a2 890 Gene3D G3DSA:1.10.390.60 242 491 1.1E-86 T 17-10-2018 BJD13_10925 9b98f24815541e0b818a1d49dbf146a2 890 SUPERFAMILY SSF63737 41 238 1.19E-49 T 17-10-2018 BJD13_10925 9b98f24815541e0b818a1d49dbf146a2 890 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 337 352 9.4E-24 T 17-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 BJD13_10925 9b98f24815541e0b818a1d49dbf146a2 890 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 356 368 9.4E-24 T 17-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 BJD13_10925 9b98f24815541e0b818a1d49dbf146a2 890 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 301 311 9.4E-24 T 17-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 BJD13_10925 9b98f24815541e0b818a1d49dbf146a2 890 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 173 188 9.4E-24 T 17-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 BJD13_10925 9b98f24815541e0b818a1d49dbf146a2 890 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 221 236 9.4E-24 T 17-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 BJD13_10925 9b98f24815541e0b818a1d49dbf146a2 890 Gene3D G3DSA:2.60.40.1730 31 239 1.0E-60 T 17-10-2018 BJD13_06325 55ac931d7ef16f19f65a0e9cca02a787 106 Gene3D G3DSA:3.30.1390.10 1 106 1.2E-42 T 17-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like BJD13_06325 55ac931d7ef16f19f65a0e9cca02a787 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 4 101 28.651 T 17-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS BJD13_06325 55ac931d7ef16f19f65a0e9cca02a787 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 24 102 4.5E-34 T 17-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 BJD13_06325 55ac931d7ef16f19f65a0e9cca02a787 106 SUPERFAMILY SSF54736 21 105 2.14E-32 T 17-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like BJD13_12805 b6ad8780d01465839596e6ec6cccf4a7 411 Pfam PF14450 Cell division protein FtsA 208 375 5.4E-24 T 17-10-2018 BJD13_12805 b6ad8780d01465839596e6ec6cccf4a7 411 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 378 2.7E-160 T 17-10-2018 IPR020823 Cell division protein FtsA BJD13_12805 b6ad8780d01465839596e6ec6cccf4a7 411 PIRSF PIRSF003101 1 411 3.5E-150 T 17-10-2018 IPR020823 Cell division protein FtsA BJD13_12805 b6ad8780d01465839596e6ec6cccf4a7 411 Pfam PF14450 Cell division protein FtsA 11 195 3.9E-11 T 17-10-2018 BJD13_12805 b6ad8780d01465839596e6ec6cccf4a7 411 Gene3D G3DSA:3.90.640.10 236 301 2.0E-121 T 17-10-2018 BJD13_12805 b6ad8780d01465839596e6ec6cccf4a7 411 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 411 30.631 T 17-10-2018 IPR020823 Cell division protein FtsA BJD13_12805 b6ad8780d01465839596e6ec6cccf4a7 411 SUPERFAMILY SSF53067 200 378 1.3E-45 T 17-10-2018 BJD13_12805 b6ad8780d01465839596e6ec6cccf4a7 411 SMART SM00842 10 197 7.8E-104 T 17-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 BJD13_12805 b6ad8780d01465839596e6ec6cccf4a7 411 Gene3D G3DSA:3.30.1490.110 87 170 2.0E-121 T 17-10-2018 BJD13_12805 b6ad8780d01465839596e6ec6cccf4a7 411 SUPERFAMILY SSF53067 9 198 5.89E-61 T 17-10-2018 BJD13_12805 b6ad8780d01465839596e6ec6cccf4a7 411 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 1.0E-28 T 17-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 BJD13_12805 b6ad8780d01465839596e6ec6cccf4a7 411 Gene3D G3DSA:3.30.420.40 13 371 2.0E-121 T 17-10-2018 BJD13_12805 b6ad8780d01465839596e6ec6cccf4a7 411 Gene3D G3DSA:3.30.420.40 198 353 2.0E-121 T 17-10-2018 BJD13_16005 698f8c7a61738852c5d0ebed69672786 215 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 180 206 6.2E-8 T 17-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BJD13_16005 698f8c7a61738852c5d0ebed69672786 215 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 102 124 6.2E-8 T 17-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BJD13_16005 698f8c7a61738852c5d0ebed69672786 215 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 139 148 6.2E-8 T 17-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BJD13_16005 698f8c7a61738852c5d0ebed69672786 215 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 194 205 - T 17-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BJD13_16005 698f8c7a61738852c5d0ebed69672786 215 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 102 112 - T 17-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BJD13_16005 698f8c7a61738852c5d0ebed69672786 215 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 69 205 2.1E-44 T 17-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BJD13_16005 698f8c7a61738852c5d0ebed69672786 215 SUPERFAMILY SSF49329 60 205 3.01E-43 T 17-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BJD13_16005 698f8c7a61738852c5d0ebed69672786 215 Gene3D G3DSA:2.60.40.200 59 211 5.5E-48 T 17-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BJD13_14900 fe061f93588fe36d87309f8d3d666ea3 645 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 138 161 - T 17-10-2018 IPR025505 FHIPEP conserved site BJD13_14900 fe061f93588fe36d87309f8d3d666ea3 645 Pfam PF00771 FHIPEP family 27 434 4.0E-155 T 17-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BJD13_14900 fe061f93588fe36d87309f8d3d666ea3 645 Pfam PF00771 FHIPEP family 437 635 1.6E-45 T 17-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BJD13_14900 fe061f93588fe36d87309f8d3d666ea3 645 Gene3D G3DSA:1.10.490.80 547 643 5.2E-27 T 17-10-2018 BJD13_14900 fe061f93588fe36d87309f8d3d666ea3 645 PIRSF PIRSF005419 433 645 1.8E-50 T 17-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BJD13_14900 fe061f93588fe36d87309f8d3d666ea3 645 PIRSF PIRSF005419 4 446 3.0E-160 T 17-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BJD13_14900 fe061f93588fe36d87309f8d3d666ea3 645 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 71 90 1.4E-49 T 17-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BJD13_14900 fe061f93588fe36d87309f8d3d666ea3 645 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 233 247 1.4E-49 T 17-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BJD13_14900 fe061f93588fe36d87309f8d3d666ea3 645 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 182 199 1.4E-49 T 17-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BJD13_14900 fe061f93588fe36d87309f8d3d666ea3 645 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 133 149 1.4E-49 T 17-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BJD13_14900 fe061f93588fe36d87309f8d3d666ea3 645 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 34 47 1.4E-49 T 17-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BJD13_14900 fe061f93588fe36d87309f8d3d666ea3 645 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 152 170 1.4E-49 T 17-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BJD13_14900 fe061f93588fe36d87309f8d3d666ea3 645 Gene3D G3DSA:3.40.30.60 361 439 1.1E-9 T 17-10-2018 BJD13_14900 fe061f93588fe36d87309f8d3d666ea3 645 Gene3D G3DSA:1.10.8.540 456 544 1.1E-27 T 17-10-2018 BJD13_09610 f033e1be7f4e52d2ef36275b35942d7a 465 PIRSF PIRSF006060 1 465 1.3E-74 T 17-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BJD13_09610 f033e1be7f4e52d2ef36275b35942d7a 465 ProSitePatterns PS00218 Amino acid permeases signature. 45 76 - T 17-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 BJD13_09610 f033e1be7f4e52d2ef36275b35942d7a 465 Gene3D G3DSA:1.20.1740.10 11 462 6.0E-58 T 17-10-2018 BJD13_09610 f033e1be7f4e52d2ef36275b35942d7a 465 Pfam PF00324 Amino acid permease 20 451 1.0E-107 T 17-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 BJD13_05545 ebc1729462f01deecd8fad39889d310d 199 Gene3D G3DSA:3.30.300.130 102 189 1.6E-22 T 17-10-2018 IPR034904 Fe-S cluster assembly domain superfamily BJD13_05545 ebc1729462f01deecd8fad39889d310d 199 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 120 179 3.0E-28 T 17-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 BJD13_05545 ebc1729462f01deecd8fad39889d310d 199 Pfam PF01106 NifU-like domain 115 179 7.3E-20 T 17-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 BJD13_05545 ebc1729462f01deecd8fad39889d310d 199 SUPERFAMILY SSF117916 103 186 1.05E-22 T 17-10-2018 IPR034904 Fe-S cluster assembly domain superfamily BJD13_05545 ebc1729462f01deecd8fad39889d310d 199 Gene3D G3DSA:2.60.300.12 1 100 1.9E-8 T 17-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 BJD13_05545 ebc1729462f01deecd8fad39889d310d 199 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 1 193 39.667 T 17-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 BJD13_05545 ebc1729462f01deecd8fad39889d310d 199 SUPERFAMILY SSF89360 1 99 6.08E-15 T 17-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 BJD13_03455 834b268af108d94868a67b3e52e4d1a4 240 Pfam PF13683 Integrase core domain 157 223 4.3E-25 T 17-10-2018 IPR001584 Integrase, catalytic core GO:0015074 BJD13_03455 834b268af108d94868a67b3e52e4d1a4 240 SUPERFAMILY SSF53098 67 227 2.78E-39 T 17-10-2018 IPR012337 Ribonuclease H-like superfamily BJD13_03455 834b268af108d94868a67b3e52e4d1a4 240 Gene3D G3DSA:3.30.420.10 68 237 1.3E-19 T 17-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BJD13_07275 834b268af108d94868a67b3e52e4d1a4 240 Pfam PF13683 Integrase core domain 157 223 4.3E-25 T 17-10-2018 IPR001584 Integrase, catalytic core GO:0015074 BJD13_07275 834b268af108d94868a67b3e52e4d1a4 240 SUPERFAMILY SSF53098 67 227 2.78E-39 T 17-10-2018 IPR012337 Ribonuclease H-like superfamily BJD13_07275 834b268af108d94868a67b3e52e4d1a4 240 Gene3D G3DSA:3.30.420.10 68 237 1.3E-19 T 17-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BJD13_13175 a6945b16a53f5c2fa40afe1e20fe1787 158 Gene3D G3DSA:3.30.1360.100 80 153 8.5E-8 T 17-10-2018 BJD13_13175 a6945b16a53f5c2fa40afe1e20fe1787 158 Pfam PF04612 Type II secretion system (T2SS), protein M 11 151 2.6E-26 T 17-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 BJD13_13175 a6945b16a53f5c2fa40afe1e20fe1787 158 SUPERFAMILY SSF103054 81 154 5.1E-13 T 17-10-2018 IPR023229 Type II secretion system protein M, periplasmic domain superfamily BJD13_07020 f10c895e371f726f4c638da6816cfae3 306 PIRSF PIRSF015283 1 306 5.1E-100 T 17-10-2018 IPR016631 Regulatory, RpfE BJD13_07020 f10c895e371f726f4c638da6816cfae3 306 Gene3D G3DSA:3.30.70.2130 146 205 1.9E-5 T 17-10-2018 BJD13_07380 0d2cdb88e1a549766208561edabeaf12 432 Gene3D G3DSA:2.40.30.170 303 352 8.7E-8 T 17-10-2018 BJD13_07380 0d2cdb88e1a549766208561edabeaf12 432 Gene3D G3DSA:2.40.50.100 272 302 8.7E-8 T 17-10-2018 BJD13_07380 0d2cdb88e1a549766208561edabeaf12 432 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 89 109 4.2E-10 T 17-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BJD13_07380 0d2cdb88e1a549766208561edabeaf12 432 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 318 342 4.2E-10 T 17-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BJD13_07380 0d2cdb88e1a549766208561edabeaf12 432 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 395 410 4.2E-10 T 17-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BJD13_07380 0d2cdb88e1a549766208561edabeaf12 432 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 410 430 4.2E-10 T 17-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BJD13_07380 0d2cdb88e1a549766208561edabeaf12 432 Gene3D G3DSA:2.40.50.100 79 181 1.1E-5 T 17-10-2018 BJD13_07380 0d2cdb88e1a549766208561edabeaf12 432 Gene3D G3DSA:1.10.287.470 112 177 1.1E-5 T 17-10-2018 BJD13_07380 0d2cdb88e1a549766208561edabeaf12 432 Pfam PF13437 HlyD family secretion protein 273 384 4.1E-9 T 17-10-2018 BJD13_21125 571fa3077bb9ee34751eed607bc9a4f8 456 Gene3D G3DSA:3.40.50.1100 40 153 1.0E-105 T 17-10-2018 BJD13_21125 571fa3077bb9ee34751eed607bc9a4f8 456 Pfam PF00571 CBS domain 341 388 8.0E-7 T 17-10-2018 IPR000644 CBS domain BJD13_21125 571fa3077bb9ee34751eed607bc9a4f8 456 SUPERFAMILY SSF54631 335 452 2.4E-17 T 17-10-2018 BJD13_21125 571fa3077bb9ee34751eed607bc9a4f8 456 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 32 50 - T 17-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 BJD13_21125 571fa3077bb9ee34751eed607bc9a4f8 456 SMART SM00116 343 390 5.1E-7 T 17-10-2018 IPR000644 CBS domain BJD13_21125 571fa3077bb9ee34751eed607bc9a4f8 456 Gene3D G3DSA:3.10.580.10 330 453 2.4E-16 T 17-10-2018 BJD13_21125 571fa3077bb9ee34751eed607bc9a4f8 456 SUPERFAMILY SSF53686 2 321 5.63E-91 T 17-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BJD13_21125 571fa3077bb9ee34751eed607bc9a4f8 456 Gene3D G3DSA:3.40.50.1100 9 310 1.0E-105 T 17-10-2018 BJD13_21125 571fa3077bb9ee34751eed607bc9a4f8 456 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 302 1.7E-63 T 17-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme BJD13_11715 c39a46be30f7a48e733e61211d08f800 679 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 15 337 1.0E-71 T 17-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 BJD13_11715 c39a46be30f7a48e733e61211d08f800 679 Gene3D G3DSA:3.40.50.720 384 672 2.6E-111 T 17-10-2018 BJD13_11715 c39a46be30f7a48e733e61211d08f800 679 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 384 643 2.7E-21 T 17-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BJD13_11715 c39a46be30f7a48e733e61211d08f800 679 Gene3D G3DSA:3.50.50.60 478 632 2.6E-111 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_11715 c39a46be30f7a48e733e61211d08f800 679 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 385 407 1.7E-5 T 17-10-2018 BJD13_11715 c39a46be30f7a48e733e61211d08f800 679 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 522 531 1.7E-5 T 17-10-2018 BJD13_11715 c39a46be30f7a48e733e61211d08f800 679 Gene3D G3DSA:3.20.20.70 11 378 9.3E-115 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD13_11715 c39a46be30f7a48e733e61211d08f800 679 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 625 641 6.8E-11 T 17-10-2018 BJD13_11715 c39a46be30f7a48e733e61211d08f800 679 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 386 405 6.8E-11 T 17-10-2018 BJD13_11715 c39a46be30f7a48e733e61211d08f800 679 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 506 524 6.8E-11 T 17-10-2018 BJD13_11715 c39a46be30f7a48e733e61211d08f800 679 SUPERFAMILY SSF51971 342 528 3.41E-41 T 17-10-2018 BJD13_11715 c39a46be30f7a48e733e61211d08f800 679 SUPERFAMILY SSF51905 469 657 1.58E-19 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_11715 c39a46be30f7a48e733e61211d08f800 679 SUPERFAMILY SSF51395 10 371 2.33E-104 T 17-10-2018 BJD13_24025 a31065e3a638de7d59a6819070f4e594 790 SMART SM00437 250 513 8.9E-54 T 17-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 BJD13_24025 a31065e3a638de7d59a6819070f4e594 790 Gene3D G3DSA:3.40.50.140 1 141 1.9E-43 T 17-10-2018 BJD13_24025 a31065e3a638de7d59a6819070f4e594 790 Hamap MF_00952 DNA topoisomerase 1 [topA]. 1 698 49.0 T 17-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 BJD13_24025 a31065e3a638de7d59a6819070f4e594 790 Gene3D G3DSA:1.10.460.10 143 556 5.6E-102 T 17-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 BJD13_24025 a31065e3a638de7d59a6819070f4e594 790 Gene3D G3DSA:1.10.290.10 258 378 5.6E-102 T 17-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 BJD13_24025 a31065e3a638de7d59a6819070f4e594 790 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 169 187 2.5E-28 T 17-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BJD13_24025 a31065e3a638de7d59a6819070f4e594 790 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 84 97 2.5E-28 T 17-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BJD13_24025 a31065e3a638de7d59a6819070f4e594 790 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 364 380 2.5E-28 T 17-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BJD13_24025 a31065e3a638de7d59a6819070f4e594 790 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 475 489 2.5E-28 T 17-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BJD13_24025 a31065e3a638de7d59a6819070f4e594 790 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 292 301 2.5E-28 T 17-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BJD13_24025 a31065e3a638de7d59a6819070f4e594 790 Pfam PF01751 Toprim domain 3 120 2.0E-23 T 17-10-2018 IPR006171 TOPRIM domain BJD13_24025 a31065e3a638de7d59a6819070f4e594 790 SUPERFAMILY SSF56712 1 584 2.35E-141 T 17-10-2018 IPR023405 DNA topoisomerase, type IA, core domain BJD13_24025 a31065e3a638de7d59a6819070f4e594 790 SMART SM00493 1 110 8.4E-27 T 17-10-2018 IPR006171 TOPRIM domain BJD13_24025 a31065e3a638de7d59a6819070f4e594 790 Pfam PF01131 DNA topoisomerase 135 550 4.0E-90 T 17-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BJD13_24025 a31065e3a638de7d59a6819070f4e594 790 SMART SM00436 111 199 3.0E-33 T 17-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 BJD13_24025 a31065e3a638de7d59a6819070f4e594 790 Gene3D G3DSA:2.70.20.10 191 458 5.6E-102 T 17-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 BJD13_24025 a31065e3a638de7d59a6819070f4e594 790 SUPERFAMILY SSF57783 707 745 5.95E-8 T 17-10-2018 BJD13_12105 07d0d61c7dba7c85ff070781a8573e18 206 Gene3D G3DSA:3.40.30.10 22 202 9.4E-37 T 17-10-2018 BJD13_12105 07d0d61c7dba7c85ff070781a8573e18 206 Pfam PF00578 AhpC/TSA family 71 184 8.9E-17 T 17-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 BJD13_12105 07d0d61c7dba7c85ff070781a8573e18 206 ProSitePatterns PS00194 Thioredoxin family active site. 96 114 - T 17-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 BJD13_12105 07d0d61c7dba7c85ff070781a8573e18 206 SUPERFAMILY SSF52833 6 198 3.21E-33 T 17-10-2018 IPR036249 Thioredoxin-like superfamily BJD13_06930 40ddc2b456626b4012affe35ff99b195 358 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 7 355 40.8 T 17-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 BJD13_06930 40ddc2b456626b4012affe35ff99b195 358 SMART SM00448 7 130 2.6E-21 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_06930 40ddc2b456626b4012affe35ff99b195 358 Gene3D G3DSA:3.40.50.2300 6 136 1.3E-30 T 17-10-2018 BJD13_06930 40ddc2b456626b4012affe35ff99b195 358 SUPERFAMILY SSF52738 167 354 9.42E-70 T 17-10-2018 IPR035909 Methylesterase CheB, C-terminal BJD13_06930 40ddc2b456626b4012affe35ff99b195 358 SUPERFAMILY SSF52172 6 111 1.85E-28 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_06930 40ddc2b456626b4012affe35ff99b195 358 Pfam PF00072 Response regulator receiver domain 9 111 9.1E-25 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_06930 40ddc2b456626b4012affe35ff99b195 358 PIRSF PIRSF000876 4 358 2.4E-135 T 17-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 BJD13_06930 40ddc2b456626b4012affe35ff99b195 358 Gene3D G3DSA:3.40.50.180 161 358 3.9E-75 T 17-10-2018 IPR035909 Methylesterase CheB, C-terminal BJD13_06930 40ddc2b456626b4012affe35ff99b195 358 Pfam PF01339 CheB methylesterase 172 350 4.1E-57 T 17-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 BJD13_16025 ed67bc21ee82ebfbbe009144aff384c5 480 PRINTS PR00342 Rhesus blood group protein signature 274 292 2.2E-6 T 17-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 BJD13_16025 ed67bc21ee82ebfbbe009144aff384c5 480 PRINTS PR00342 Rhesus blood group protein signature 178 194 2.2E-6 T 17-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 BJD13_16025 ed67bc21ee82ebfbbe009144aff384c5 480 PRINTS PR00342 Rhesus blood group protein signature 305 327 2.2E-6 T 17-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 BJD13_16025 ed67bc21ee82ebfbbe009144aff384c5 480 PRINTS PR00342 Rhesus blood group protein signature 360 378 2.2E-6 T 17-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 BJD13_16025 ed67bc21ee82ebfbbe009144aff384c5 480 ProSitePatterns PS01219 Ammonium transporters signature. 235 260 - T 17-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 BJD13_16025 ed67bc21ee82ebfbbe009144aff384c5 480 Pfam PF00909 Ammonium Transporter Family 79 478 1.5E-118 T 17-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 BJD13_16025 ed67bc21ee82ebfbbe009144aff384c5 480 TIGRFAM TIGR00836 amt: ammonium transporter 77 478 5.1E-130 T 17-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 BJD13_16025 ed67bc21ee82ebfbbe009144aff384c5 480 SUPERFAMILY SSF111352 73 459 8.63E-123 T 17-10-2018 BJD13_16025 ed67bc21ee82ebfbbe009144aff384c5 480 Gene3D G3DSA:1.10.3430.10 54 480 2.5E-135 T 17-10-2018 IPR029020 Ammonium/urea transporter BJD13_16410 1b7d26de9e22e80a819425a14e8671b5 399 Pfam PF07730 Histidine kinase 214 276 3.4E-12 T 17-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 BJD13_16410 1b7d26de9e22e80a819425a14e8671b5 399 SUPERFAMILY SSF55874 282 398 4.52E-13 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_16410 1b7d26de9e22e80a819425a14e8671b5 399 Gene3D G3DSA:3.30.565.10 279 399 1.2E-24 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_17570 fcca97f17045a28b572187b5f00416e7 222 Hamap MF_01584 UPF0502 protein YceH [yceH]. 10 215 30.558 T 17-10-2018 IPR007432 Protein of unknown function DUF480 BJD13_17570 fcca97f17045a28b572187b5f00416e7 222 Gene3D G3DSA:1.10.10.10 94 171 8.9E-30 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_17570 fcca97f17045a28b572187b5f00416e7 222 Pfam PF04337 Protein of unknown function, DUF480 10 154 6.2E-55 T 17-10-2018 IPR007432 Protein of unknown function DUF480 BJD13_17570 fcca97f17045a28b572187b5f00416e7 222 SUPERFAMILY SSF46785 90 170 5.18E-28 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_17570 fcca97f17045a28b572187b5f00416e7 222 SUPERFAMILY SSF46785 8 87 2.48E-28 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_17570 fcca97f17045a28b572187b5f00416e7 222 Gene3D G3DSA:1.10.10.10 1 93 4.5E-33 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_02285 45ff773533f0e25aafacb8909cf22c3f 171 SMART SM00260 15 156 1.9E-29 T 17-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BJD13_02285 45ff773533f0e25aafacb8909cf22c3f 171 Gene3D G3DSA:2.30.30.40 21 150 2.0E-36 T 17-10-2018 BJD13_02285 45ff773533f0e25aafacb8909cf22c3f 171 Gene3D G3DSA:2.40.50.180 38 151 2.0E-36 T 17-10-2018 BJD13_02285 45ff773533f0e25aafacb8909cf22c3f 171 SUPERFAMILY SSF50341 11 158 3.53E-36 T 17-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 BJD13_02285 45ff773533f0e25aafacb8909cf22c3f 171 Pfam PF01584 CheW-like domain 19 157 1.1E-32 T 17-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BJD13_12280 5994ff1501f0b4900bf313e1c51656ac 171 SUPERFAMILY SSF54427 36 158 5.66E-32 T 17-10-2018 IPR032710 NTF2-like domain superfamily BJD13_12280 5994ff1501f0b4900bf313e1c51656ac 171 PIRSF PIRSF028470 1 162 1.0E-72 T 17-10-2018 IPR016887 Uncharacterised conserved protein UCP028470, steroid isomerase-related BJD13_12280 5994ff1501f0b4900bf313e1c51656ac 171 Gene3D G3DSA:3.10.450.50 19 171 7.2E-57 T 17-10-2018 BJD13_12280 5994ff1501f0b4900bf313e1c51656ac 171 TIGRFAM TIGR02246 TIGR02246: conserved hypothetical protein 36 159 2.7E-41 T 17-10-2018 IPR011944 Steroid delta5-4-isomerase KEGG: 00140+5.3.3.1|KEGG: 00984+5.3.3.1|MetaCyc: PWY-2582|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-699|MetaCyc: PWY-7299 BJD13_12280 5994ff1501f0b4900bf313e1c51656ac 171 Pfam PF08332 Calcium/calmodulin dependent protein kinase II association domain 36 159 1.6E-46 T 17-10-2018 IPR013543 Calcium/calmodulin-dependent protein kinase II, association-domain GO:0004683|GO:0005516|GO:0006468 Reactome: R-HSA-3371571|Reactome: R-HSA-399719|Reactome: R-HSA-438066|Reactome: R-HSA-442729|Reactome: R-HSA-442742|Reactome: R-HSA-442982|Reactome: R-HSA-5576892|Reactome: R-HSA-5578775|Reactome: R-HSA-5673001|Reactome: R-HSA-877300|Reactome: R-HSA-936837 BJD13_18790 58df24f0d77b07913b2d63187bfd7bd9 248 Pfam PF00005 ABC transporter 22 165 4.6E-29 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD13_18790 58df24f0d77b07913b2d63187bfd7bd9 248 SMART SM00382 30 212 2.7E-12 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_18790 58df24f0d77b07913b2d63187bfd7bd9 248 SUPERFAMILY SSF52540 10 226 2.51E-60 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_18790 58df24f0d77b07913b2d63187bfd7bd9 248 Gene3D G3DSA:3.40.50.300 1 245 4.6E-68 T 17-10-2018 BJD13_13575 4c61015b62fc9dac0c9cd1d7573e07ef 189 ProSitePatterns PS00213 Lipocalin signature. 33 44 - T 17-10-2018 IPR022272 Lipocalin family conserved site BJD13_13575 4c61015b62fc9dac0c9cd1d7573e07ef 189 SUPERFAMILY SSF50814 12 176 2.74E-29 T 17-10-2018 IPR012674 Calycin BJD13_13575 4c61015b62fc9dac0c9cd1d7573e07ef 189 PIRSF PIRSF036893 1 185 3.6E-43 T 17-10-2018 IPR022271 Lipocalin, ApoD type BJD13_13575 4c61015b62fc9dac0c9cd1d7573e07ef 189 Pfam PF08212 Lipocalin-like domain 32 173 2.4E-41 T 17-10-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain BJD13_13575 4c61015b62fc9dac0c9cd1d7573e07ef 189 Gene3D G3DSA:2.40.128.20 20 184 9.3E-29 T 17-10-2018 IPR012674 Calycin BJD13_04250 e2548a03834513adecdf05f32c8e5044 419 Gene3D G3DSA:1.20.810.10 3 419 3.1E-147 T 17-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 BJD13_04250 e2548a03834513adecdf05f32c8e5044 419 Pfam PF00033 Cytochrome b/b6/petB 32 220 4.0E-68 T 17-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 BJD13_04250 e2548a03834513adecdf05f32c8e5044 419 SUPERFAMILY SSF81648 294 410 7.41E-31 T 17-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 BJD13_04250 e2548a03834513adecdf05f32c8e5044 419 PIRSF PIRSF038885 5 419 1.8E-155 T 17-10-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 BJD13_04250 e2548a03834513adecdf05f32c8e5044 419 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 290 393 5.6E-38 T 17-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 BJD13_04250 e2548a03834513adecdf05f32c8e5044 419 SUPERFAMILY SSF81342 24 292 2.67E-95 T 17-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 BJD13_06855 54effc1d23435ac9b825802ce6d6324b 752 Pfam PF12729 Four helix bundle sensory module for signal transduction 9 181 1.2E-17 T 17-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain BJD13_06855 54effc1d23435ac9b825802ce6d6324b 752 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 623 652 4.3E-59 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD13_06855 54effc1d23435ac9b825802ce6d6324b 752 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 469 498 4.3E-59 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD13_06855 54effc1d23435ac9b825802ce6d6324b 752 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 546 573 4.3E-59 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD13_06855 54effc1d23435ac9b825802ce6d6324b 752 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 575 604 4.3E-59 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD13_06855 54effc1d23435ac9b825802ce6d6324b 752 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 193 218 4.3E-59 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD13_06855 54effc1d23435ac9b825802ce6d6324b 752 SUPERFAMILY SSF58104 415 697 2.35E-71 T 17-10-2018 BJD13_06855 54effc1d23435ac9b825802ce6d6324b 752 SMART SM00283 448 695 1.0E-92 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD13_06855 54effc1d23435ac9b825802ce6d6324b 752 Pfam PF00672 HAMP domain 214 262 2.3E-8 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_06855 54effc1d23435ac9b825802ce6d6324b 752 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 508 662 3.8E-53 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD13_06855 54effc1d23435ac9b825802ce6d6324b 752 Gene3D G3DSA:1.10.287.950 395 697 1.7E-85 T 17-10-2018 BJD13_06855 54effc1d23435ac9b825802ce6d6324b 752 Gene3D G3DSA:1.20.120.1530 206 352 2.1E-46 T 17-10-2018 BJD13_06855 54effc1d23435ac9b825802ce6d6324b 752 SUPERFAMILY SSF158472 214 264 1.83E-9 T 17-10-2018 BJD13_06855 54effc1d23435ac9b825802ce6d6324b 752 SMART SM00304 214 266 3.9E-9 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_06855 54effc1d23435ac9b825802ce6d6324b 752 SMART SM00304 395 447 18.0 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_17000 86e7c075a86c02b581f0cc52c31f025d 145 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 62 109 1.0E-20 T 17-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 BJD13_17000 86e7c075a86c02b581f0cc52c31f025d 145 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 10 118 17.929 T 17-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 BJD13_17000 86e7c075a86c02b581f0cc52c31f025d 145 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 59 73 - T 17-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 BJD13_17000 86e7c075a86c02b581f0cc52c31f025d 145 Gene3D G3DSA:3.30.230.10 7 118 2.2E-27 T 17-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BJD13_17000 86e7c075a86c02b581f0cc52c31f025d 145 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 14 116 1.3E-18 T 17-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 BJD13_17000 86e7c075a86c02b581f0cc52c31f025d 145 Pfam PF00825 Ribonuclease P 10 115 6.3E-25 T 17-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 BJD13_17000 86e7c075a86c02b581f0cc52c31f025d 145 SUPERFAMILY SSF54211 10 116 1.04E-24 T 17-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BJD13_18800 65d92ff4bfc3b3d5a3532771a46e03a2 336 PRINTS PR01374 Gram-negative bacterial tonB protein signature 257 278 3.0E-9 T 17-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 BJD13_18800 65d92ff4bfc3b3d5a3532771a46e03a2 336 PRINTS PR01374 Gram-negative bacterial tonB protein signature 278 296 3.0E-9 T 17-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 BJD13_18800 65d92ff4bfc3b3d5a3532771a46e03a2 336 PRINTS PR01374 Gram-negative bacterial tonB protein signature 297 314 3.0E-9 T 17-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 BJD13_18800 65d92ff4bfc3b3d5a3532771a46e03a2 336 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 263 334 1.9E-17 T 17-10-2018 IPR006260 TonB/TolA, C-terminal BJD13_18800 65d92ff4bfc3b3d5a3532771a46e03a2 336 SUPERFAMILY SSF74653 255 321 1.57E-19 T 17-10-2018 BJD13_18800 65d92ff4bfc3b3d5a3532771a46e03a2 336 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 261 332 2.3E-17 T 17-10-2018 IPR037682 TonB, C-terminal GO:0055085 BJD13_18800 65d92ff4bfc3b3d5a3532771a46e03a2 336 Gene3D G3DSA:3.30.1150.10 238 333 7.2E-22 T 17-10-2018 BJD13_03780 ed559a8ba2e892fb14259f213e250f1d 779 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 175 473 4.7E-66 T 17-10-2018 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 BJD13_03780 ed559a8ba2e892fb14259f213e250f1d 779 Gene3D G3DSA:2.140.10.30 171 489 9.9E-70 T 17-10-2018 IPR038554 Dipeptidylpeptidase IV, N-terminal domain superfamily BJD13_03780 ed559a8ba2e892fb14259f213e250f1d 779 SUPERFAMILY SSF82171 177 496 2.62E-32 T 17-10-2018 BJD13_03780 ed559a8ba2e892fb14259f213e250f1d 779 SUPERFAMILY SSF53474 504 763 1.37E-52 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_03780 ed559a8ba2e892fb14259f213e250f1d 779 Pfam PF00326 Prolyl oligopeptidase family 569 764 5.4E-50 T 17-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 BJD13_03780 ed559a8ba2e892fb14259f213e250f1d 779 Gene3D G3DSA:3.40.50.1820 493 774 6.6E-50 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_16560 20c341fcfdb656ffc9e8d9f62c8a0a81 264 Pfam PF12787 EcsC protein family 23 244 9.0E-39 T 17-10-2018 IPR024787 EcsC protein BJD13_18075 da186d85e76ff1425e58e8cd73ca88af 290 Pfam PF04909 Amidohydrolase 4 277 1.1E-36 T 17-10-2018 IPR006680 Amidohydrolase-related GO:0016787 BJD13_18075 da186d85e76ff1425e58e8cd73ca88af 290 Gene3D G3DSA:3.20.20.140 2 285 2.8E-77 T 17-10-2018 BJD13_18075 da186d85e76ff1425e58e8cd73ca88af 290 SUPERFAMILY SSF51556 3 277 1.11E-63 T 17-10-2018 IPR032466 Metal-dependent hydrolase BJD13_12400 084e830e8f938291bd989813d97da7d4 119 SUPERFAMILY SSF48076 1 117 4.05E-48 T 17-10-2018 IPR036622 Dioxygenase LigAB, LigA subunit superfamily BJD13_12400 084e830e8f938291bd989813d97da7d4 119 Pfam PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit 28 114 2.4E-33 T 17-10-2018 IPR011986 Extradiol ring-cleavage dioxygenase LigAB, LigA subunit BJD13_12400 084e830e8f938291bd989813d97da7d4 119 Gene3D G3DSA:1.10.700.10 13 118 2.2E-40 T 17-10-2018 IPR036622 Dioxygenase LigAB, LigA subunit superfamily BJD13_07695 91c108817271c0984db7f0c378cf5106 475 PRINTS PR00171 Sugar transporter signature 401 413 1.5E-24 T 17-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 BJD13_07695 91c108817271c0984db7f0c378cf5106 475 PRINTS PR00171 Sugar transporter signature 30 40 1.5E-24 T 17-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 BJD13_07695 91c108817271c0984db7f0c378cf5106 475 PRINTS PR00171 Sugar transporter signature 113 132 1.5E-24 T 17-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 BJD13_07695 91c108817271c0984db7f0c378cf5106 475 PRINTS PR00171 Sugar transporter signature 378 399 1.5E-24 T 17-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 BJD13_07695 91c108817271c0984db7f0c378cf5106 475 PRINTS PR00171 Sugar transporter signature 281 291 1.5E-24 T 17-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 BJD13_07695 91c108817271c0984db7f0c378cf5106 475 SUPERFAMILY SSF103473 11 474 1.02E-69 T 17-10-2018 IPR036259 MFS transporter superfamily BJD13_07695 91c108817271c0984db7f0c378cf5106 475 ProSitePatterns PS00216 Sugar transport proteins signature 1. 325 342 - T 17-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 BJD13_07695 91c108817271c0984db7f0c378cf5106 475 Pfam PF00083 Sugar (and other) transporter 24 474 7.1E-110 T 17-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 BJD13_07695 91c108817271c0984db7f0c378cf5106 475 ProSitePatterns PS00217 Sugar transport proteins signature 2. 118 143 - T 17-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 BJD13_07695 91c108817271c0984db7f0c378cf5106 475 Gene3D G3DSA:1.20.1250.20 12 475 6.7E-125 T 17-10-2018 BJD13_07695 91c108817271c0984db7f0c378cf5106 475 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 12 473 9.7E-111 T 17-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 BJD13_07695 91c108817271c0984db7f0c378cf5106 475 ProSitePatterns PS00216 Sugar transport proteins signature 1. 76 93 - T 17-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 BJD13_15250 457d941e0ed5e746e7a9dd7cd9ce386f 247 Gene3D G3DSA:3.30.420.10 76 232 5.4E-18 T 17-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BJD13_15250 457d941e0ed5e746e7a9dd7cd9ce386f 247 SUPERFAMILY SSF53098 72 238 4.43E-40 T 17-10-2018 IPR012337 Ribonuclease H-like superfamily BJD13_15250 457d941e0ed5e746e7a9dd7cd9ce386f 247 Pfam PF13683 Integrase core domain 165 230 6.5E-26 T 17-10-2018 IPR001584 Integrase, catalytic core GO:0015074 BJD13_11205 457d941e0ed5e746e7a9dd7cd9ce386f 247 Gene3D G3DSA:3.30.420.10 76 232 5.4E-18 T 17-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BJD13_11205 457d941e0ed5e746e7a9dd7cd9ce386f 247 SUPERFAMILY SSF53098 72 238 4.43E-40 T 17-10-2018 IPR012337 Ribonuclease H-like superfamily BJD13_11205 457d941e0ed5e746e7a9dd7cd9ce386f 247 Pfam PF13683 Integrase core domain 165 230 6.5E-26 T 17-10-2018 IPR001584 Integrase, catalytic core GO:0015074 BJD13_06755 457d941e0ed5e746e7a9dd7cd9ce386f 247 Gene3D G3DSA:3.30.420.10 76 232 5.4E-18 T 17-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BJD13_06755 457d941e0ed5e746e7a9dd7cd9ce386f 247 SUPERFAMILY SSF53098 72 238 4.43E-40 T 17-10-2018 IPR012337 Ribonuclease H-like superfamily BJD13_06755 457d941e0ed5e746e7a9dd7cd9ce386f 247 Pfam PF13683 Integrase core domain 165 230 6.5E-26 T 17-10-2018 IPR001584 Integrase, catalytic core GO:0015074 BJD13_13885 457d941e0ed5e746e7a9dd7cd9ce386f 247 Gene3D G3DSA:3.30.420.10 76 232 5.4E-18 T 17-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BJD13_13885 457d941e0ed5e746e7a9dd7cd9ce386f 247 SUPERFAMILY SSF53098 72 238 4.43E-40 T 17-10-2018 IPR012337 Ribonuclease H-like superfamily BJD13_13885 457d941e0ed5e746e7a9dd7cd9ce386f 247 Pfam PF13683 Integrase core domain 165 230 6.5E-26 T 17-10-2018 IPR001584 Integrase, catalytic core GO:0015074 BJD13_15400 8c94384c4bfcff5ac7c857a017bd4dfc 227 Gene3D G3DSA:1.10.10.10 136 227 1.1E-29 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_15400 8c94384c4bfcff5ac7c857a017bd4dfc 227 SUPERFAMILY SSF46894 124 226 5.1E-26 T 17-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BJD13_15400 8c94384c4bfcff5ac7c857a017bd4dfc 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 2.7E-21 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD13_15400 8c94384c4bfcff5ac7c857a017bd4dfc 227 SMART SM00448 8 118 1.7E-38 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_15400 8c94384c4bfcff5ac7c857a017bd4dfc 227 Gene3D G3DSA:3.40.50.2300 2 130 8.6E-35 T 17-10-2018 BJD13_15400 8c94384c4bfcff5ac7c857a017bd4dfc 227 SUPERFAMILY SSF52172 9 128 3.56E-39 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_15400 8c94384c4bfcff5ac7c857a017bd4dfc 227 Pfam PF00072 Response regulator receiver domain 10 118 2.5E-26 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_15400 8c94384c4bfcff5ac7c857a017bd4dfc 227 SMART SM00862 150 225 3.3E-23 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD13_15190 bce42a6528f6190c1c67777978a5ba09 179 SUPERFAMILY SSF46785 36 171 3.38E-25 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_15190 bce42a6528f6190c1c67777978a5ba09 179 Gene3D G3DSA:1.10.10.10 32 177 1.1E-24 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_15190 bce42a6528f6190c1c67777978a5ba09 179 Pfam PF12802 MarR family 67 124 2.1E-9 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD13_15190 bce42a6528f6190c1c67777978a5ba09 179 SMART SM00347 61 161 8.6E-14 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD13_18255 dc7a8777dd0c9c248c1301abe32ffcff 434 SUPERFAMILY SSF46785 7 85 9.09E-20 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_18255 dc7a8777dd0c9c248c1301abe32ffcff 434 Gene3D G3DSA:3.40.190.10 195 384 1.4E-52 T 17-10-2018 BJD13_18255 dc7a8777dd0c9c248c1301abe32ffcff 434 Gene3D G3DSA:1.10.10.10 8 94 1.7E-20 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_18255 dc7a8777dd0c9c248c1301abe32ffcff 434 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 3.2E-19 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_18255 dc7a8777dd0c9c248c1301abe32ffcff 434 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 107 163 1.1E-11 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_18255 dc7a8777dd0c9c248c1301abe32ffcff 434 SUPERFAMILY SSF53850 191 402 3.49E-38 T 17-10-2018 BJD13_18255 dc7a8777dd0c9c248c1301abe32ffcff 434 Gene3D G3DSA:3.40.190.10 269 370 1.4E-52 T 17-10-2018 BJD13_18255 dc7a8777dd0c9c248c1301abe32ffcff 434 Gene3D G3DSA:1.10.10.10 104 192 5.8E-14 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_18255 dc7a8777dd0c9c248c1301abe32ffcff 434 Pfam PF03466 LysR substrate binding domain 190 398 1.3E-32 T 17-10-2018 IPR005119 LysR, substrate-binding BJD13_18255 dc7a8777dd0c9c248c1301abe32ffcff 434 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 1.8E-9 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_18255 dc7a8777dd0c9c248c1301abe32ffcff 434 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 1.8E-9 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_18255 dc7a8777dd0c9c248c1301abe32ffcff 434 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 1.8E-9 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_18255 dc7a8777dd0c9c248c1301abe32ffcff 434 SUPERFAMILY SSF46785 102 214 5.44E-16 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_22560 49568729f73dd4738e376157ed53f342 1155 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 653 789 3.9E-7 T 17-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 BJD13_22560 49568729f73dd4738e376157ed53f342 1155 SUPERFAMILY SSF51445 650 948 1.58E-66 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily BJD13_22560 49568729f73dd4738e376157ed53f342 1155 Pfam PF00703 Glycosyl hydrolases family 2 474 578 3.5E-13 T 17-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 BJD13_22560 49568729f73dd4738e376157ed53f342 1155 Gene3D G3DSA:2.60.40.10 1058 1150 4.4E-18 T 17-10-2018 IPR013783 Immunoglobulin-like fold BJD13_22560 49568729f73dd4738e376157ed53f342 1155 Gene3D G3DSA:2.60.120.260 257 463 2.7E-47 T 17-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD13_22560 49568729f73dd4738e376157ed53f342 1155 Gene3D G3DSA:2.60.40.10 952 1057 3.0E-17 T 17-10-2018 IPR013783 Immunoglobulin-like fold BJD13_22560 49568729f73dd4738e376157ed53f342 1155 SUPERFAMILY SSF49899 62 201 6.97E-15 T 17-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily BJD13_22560 49568729f73dd4738e376157ed53f342 1155 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 334 402 5.1E-11 T 17-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 BJD13_22560 49568729f73dd4738e376157ed53f342 1155 Gene3D G3DSA:3.20.20.80 648 950 1.4E-64 T 17-10-2018 BJD13_22560 49568729f73dd4738e376157ed53f342 1155 SUPERFAMILY SSF49785 291 461 2.67E-41 T 17-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD13_22560 49568729f73dd4738e376157ed53f342 1155 SUPERFAMILY SSF49303 952 1050 1.77E-22 T 17-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily BJD13_22560 49568729f73dd4738e376157ed53f342 1155 Gene3D G3DSA:2.60.120.200 51 207 9.7E-13 T 17-10-2018 BJD13_22560 49568729f73dd4738e376157ed53f342 1155 Gene3D G3DSA:2.60.40.10 465 578 1.8E-25 T 17-10-2018 IPR013783 Immunoglobulin-like fold BJD13_22560 49568729f73dd4738e376157ed53f342 1155 SUPERFAMILY SSF49303 467 578 1.65E-21 T 17-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily BJD13_22560 49568729f73dd4738e376157ed53f342 1155 SUPERFAMILY SSF49303 1037 1145 7.05E-28 T 17-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily BJD13_22560 49568729f73dd4738e376157ed53f342 1155 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 59 194 3.9E-13 T 17-10-2018 BJD13_03745 64840dcbd18461580214af2b7ea95f6f 444 SUPERFAMILY SSF51905 9 321 6.58E-38 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_03745 64840dcbd18461580214af2b7ea95f6f 444 PIRSF PIRSF037495 8 443 4.4E-109 T 17-10-2018 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B GO:0016491|GO:0055114 BJD13_03745 64840dcbd18461580214af2b7ea95f6f 444 Gene3D G3DSA:3.50.50.60 15 304 4.4E-46 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_03745 64840dcbd18461580214af2b7ea95f6f 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 108 126 1.1E-22 T 17-10-2018 BJD13_03745 64840dcbd18461580214af2b7ea95f6f 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 152 170 1.1E-22 T 17-10-2018 BJD13_03745 64840dcbd18461580214af2b7ea95f6f 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 17 36 1.1E-22 T 17-10-2018 BJD13_03745 64840dcbd18461580214af2b7ea95f6f 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 248 264 1.1E-22 T 17-10-2018 BJD13_03745 64840dcbd18461580214af2b7ea95f6f 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 278 300 1.1E-22 T 17-10-2018 BJD13_03745 64840dcbd18461580214af2b7ea95f6f 444 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 148 172 3.5E-15 T 17-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BJD13_03745 64840dcbd18461580214af2b7ea95f6f 444 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 16 38 3.5E-15 T 17-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BJD13_03745 64840dcbd18461580214af2b7ea95f6f 444 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 109 117 3.5E-15 T 17-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BJD13_03745 64840dcbd18461580214af2b7ea95f6f 444 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 288 306 3.5E-15 T 17-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BJD13_03745 64840dcbd18461580214af2b7ea95f6f 444 Gene3D G3DSA:1.10.10.1100 351 409 2.2E-11 T 17-10-2018 BJD13_03745 64840dcbd18461580214af2b7ea95f6f 444 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 15 302 1.0E-29 T 17-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BJD13_03745 64840dcbd18461580214af2b7ea95f6f 444 Gene3D G3DSA:3.50.50.60 120 256 4.4E-46 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_07405 2b9a9928e8b46aba7760792171e4aefc 113 Gene3D G3DSA:1.10.260.40 9 106 4.7E-22 T 17-10-2018 BJD13_07405 2b9a9928e8b46aba7760792171e4aefc 113 SUPERFAMILY SSF47413 7 78 3.94E-13 T 17-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BJD13_07405 2b9a9928e8b46aba7760792171e4aefc 113 Pfam PF13560 Helix-turn-helix domain 10 70 5.8E-11 T 17-10-2018 BJD13_07405 2b9a9928e8b46aba7760792171e4aefc 113 SMART SM00530 13 72 7.3E-11 T 17-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BJD13_14760 498cca5e1ed495c7bd9d03479f5cb4a7 585 SMART SM00642 96 483 7.4E-8 T 17-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BJD13_14760 498cca5e1ed495c7bd9d03479f5cb4a7 585 Pfam PF00128 Alpha amylase, catalytic domain 125 213 2.7E-12 T 17-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BJD13_14760 498cca5e1ed495c7bd9d03479f5cb4a7 585 TIGRFAM TIGR02402 trehalose_TreZ: malto-oligosyltrehalose trehalohydrolase 21 552 1.2E-214 T 17-10-2018 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00500+3.2.1.141|MetaCyc: PWY-2661 BJD13_14760 498cca5e1ed495c7bd9d03479f5cb4a7 585 SUPERFAMILY SSF81296 9 93 1.22E-18 T 17-10-2018 IPR014756 Immunoglobulin E-set BJD13_14760 498cca5e1ed495c7bd9d03479f5cb4a7 585 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 12 73 1.6E-5 T 17-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 BJD13_14760 498cca5e1ed495c7bd9d03479f5cb4a7 585 PIRSF PIRSF006337 7 585 2.0E-220 T 17-10-2018 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00500+3.2.1.141|MetaCyc: PWY-2661 BJD13_14760 498cca5e1ed495c7bd9d03479f5cb4a7 585 SUPERFAMILY SSF51445 95 506 1.25E-98 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily BJD13_14760 498cca5e1ed495c7bd9d03479f5cb4a7 585 Gene3D G3DSA:2.60.40.1180 519 579 1.7E-5 T 17-10-2018 IPR013780 Glycosyl hydrolase, all-beta BJD13_14760 498cca5e1ed495c7bd9d03479f5cb4a7 585 Gene3D G3DSA:3.20.20.80 106 505 7.1E-160 T 17-10-2018 BJD13_14760 498cca5e1ed495c7bd9d03479f5cb4a7 585 Gene3D G3DSA:1.10.10.760 433 477 7.1E-160 T 17-10-2018 BJD13_14760 498cca5e1ed495c7bd9d03479f5cb4a7 585 Gene3D G3DSA:2.60.40.10 1 95 1.1E-23 T 17-10-2018 IPR013783 Immunoglobulin-like fold BJD13_14760 498cca5e1ed495c7bd9d03479f5cb4a7 585 Pfam PF11941 Domain of unknown function (DUF3459) 496 561 2.9E-8 T 17-10-2018 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) BJD13_23355 62414bf6330de7d7c590e3ff8aeefdc2 174 Gene3D G3DSA:1.25.40.10 35 164 3.7E-6 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_23355 62414bf6330de7d7c590e3ff8aeefdc2 174 SUPERFAMILY SSF48452 66 159 7.59E-7 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_03185 28fc3cf8ac194deb3857c0dafa043b3c 719 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 9 714 1.3E-234 T 17-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_03185 28fc3cf8ac194deb3857c0dafa043b3c 719 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 438 457 5.0E-65 T 17-10-2018 BJD13_03185 28fc3cf8ac194deb3857c0dafa043b3c 719 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 261 287 5.0E-65 T 17-10-2018 BJD13_03185 28fc3cf8ac194deb3857c0dafa043b3c 719 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 88 113 5.0E-65 T 17-10-2018 BJD13_03185 28fc3cf8ac194deb3857c0dafa043b3c 719 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 116 136 5.0E-65 T 17-10-2018 BJD13_03185 28fc3cf8ac194deb3857c0dafa043b3c 719 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 329 341 5.0E-65 T 17-10-2018 BJD13_03185 28fc3cf8ac194deb3857c0dafa043b3c 719 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 239 260 5.0E-65 T 17-10-2018 BJD13_03185 28fc3cf8ac194deb3857c0dafa043b3c 719 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 163 184 5.0E-65 T 17-10-2018 BJD13_03185 28fc3cf8ac194deb3857c0dafa043b3c 719 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 90 110 1.5E-15 T 17-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 BJD13_03185 28fc3cf8ac194deb3857c0dafa043b3c 719 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 517 538 1.5E-15 T 17-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 BJD13_03185 28fc3cf8ac194deb3857c0dafa043b3c 719 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 437 459 1.5E-15 T 17-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 BJD13_03185 28fc3cf8ac194deb3857c0dafa043b3c 719 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 279 301 1.5E-15 T 17-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 BJD13_03185 28fc3cf8ac194deb3857c0dafa043b3c 719 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 64 88 1.5E-15 T 17-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 BJD13_03185 28fc3cf8ac194deb3857c0dafa043b3c 719 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 70 127 1.0E-24 T 17-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_03185 28fc3cf8ac194deb3857c0dafa043b3c 719 Pfam PF00361 Proton-conducting membrane transporter 139 421 1.4E-86 T 17-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_13485 303fb7a39591ca1073ed31632282233c 648 Gene3D G3DSA:1.25.40.320 498 638 4.2E-41 T 17-10-2018 IPR038502 Peptidase M1 LTA-4 hydrolase/aminopeptidase, C-terminal domain superfamily BJD13_13485 303fb7a39591ca1073ed31632282233c 648 Gene3D G3DSA:1.10.1740.60 245 341 1.1E-43 T 17-10-2018 BJD13_13485 303fb7a39591ca1073ed31632282233c 648 SUPERFAMILY SSF63737 46 245 2.48E-37 T 17-10-2018 BJD13_13485 303fb7a39591ca1073ed31632282233c 648 Gene3D G3DSA:2.60.40.1730 58 244 1.5E-58 T 17-10-2018 BJD13_13485 303fb7a39591ca1073ed31632282233c 648 SUPERFAMILY SSF48371 501 637 1.9E-37 T 17-10-2018 IPR016024 Armadillo-type fold BJD13_13485 303fb7a39591ca1073ed31632282233c 648 SUPERFAMILY SSF55486 250 491 2.72E-69 T 17-10-2018 BJD13_13485 303fb7a39591ca1073ed31632282233c 648 SMART SM01263 498 637 8.2E-47 T 17-10-2018 IPR015211 Peptidase M1, leukotriene A4 hydrolase/aminopeptidase C-terminal GO:0008237|GO:0008270 BJD13_13485 303fb7a39591ca1073ed31632282233c 648 Pfam PF09127 Leukotriene A4 hydrolase, C-terminal 526 636 1.8E-26 T 17-10-2018 IPR015211 Peptidase M1, leukotriene A4 hydrolase/aminopeptidase C-terminal GO:0008237|GO:0008270 BJD13_13485 303fb7a39591ca1073ed31632282233c 648 Pfam PF01433 Peptidase family M1 domain 254 466 5.7E-48 T 17-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 BJD13_13485 303fb7a39591ca1073ed31632282233c 648 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 183 198 8.7E-17 T 17-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 BJD13_13485 303fb7a39591ca1073ed31632282233c 648 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 228 243 8.7E-17 T 17-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 BJD13_13485 303fb7a39591ca1073ed31632282233c 648 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 329 344 8.7E-17 T 17-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 BJD13_13485 303fb7a39591ca1073ed31632282233c 648 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 302 312 8.7E-17 T 17-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 BJD13_13485 303fb7a39591ca1073ed31632282233c 648 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 348 360 8.7E-17 T 17-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 BJD13_13485 303fb7a39591ca1073ed31632282233c 648 Gene3D G3DSA:1.10.390.10 342 496 2.8E-45 T 17-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily BJD13_02300 ede1a247c97fa370b1aab7ff4709b15a 669 SMART SM00073 3 100 1.9E-25 T 17-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BJD13_02300 ede1a247c97fa370b1aab7ff4709b15a 669 SUPERFAMILY SSF47226 2 126 5.36E-29 T 17-10-2018 IPR036641 HPT domain superfamily GO:0000160 BJD13_02300 ede1a247c97fa370b1aab7ff4709b15a 669 SMART SM00260 525 657 6.0E-25 T 17-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BJD13_02300 ede1a247c97fa370b1aab7ff4709b15a 669 SMART SM01231 287 347 1.2E-13 T 17-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 BJD13_02300 ede1a247c97fa370b1aab7ff4709b15a 669 Pfam PF01627 Hpt domain 5 98 8.4E-17 T 17-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BJD13_02300 ede1a247c97fa370b1aab7ff4709b15a 669 SUPERFAMILY SSF55874 349 531 7.73E-37 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_02300 ede1a247c97fa370b1aab7ff4709b15a 669 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 451 2.4E-13 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_02300 ede1a247c97fa370b1aab7ff4709b15a 669 PRINTS PR00344 Bacterial sensor protein C-terminal signature 477 487 2.4E-13 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_02300 ede1a247c97fa370b1aab7ff4709b15a 669 PRINTS PR00344 Bacterial sensor protein C-terminal signature 493 511 2.4E-13 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_02300 ede1a247c97fa370b1aab7ff4709b15a 669 PRINTS PR00344 Bacterial sensor protein C-terminal signature 517 530 2.4E-13 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_02300 ede1a247c97fa370b1aab7ff4709b15a 669 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 532 1.0E-15 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_02300 ede1a247c97fa370b1aab7ff4709b15a 669 SMART SM00387 392 533 2.6E-23 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_02300 ede1a247c97fa370b1aab7ff4709b15a 669 Gene3D G3DSA:2.30.30.40 533 653 4.5E-31 T 17-10-2018 BJD13_02300 ede1a247c97fa370b1aab7ff4709b15a 669 SUPERFAMILY SSF50341 532 657 3.53E-28 T 17-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 BJD13_02300 ede1a247c97fa370b1aab7ff4709b15a 669 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 288 342 3.5E-8 T 17-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 BJD13_02300 ede1a247c97fa370b1aab7ff4709b15a 669 Pfam PF01584 CheW-like domain 539 659 3.5E-22 T 17-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BJD13_02300 ede1a247c97fa370b1aab7ff4709b15a 669 Gene3D G3DSA:1.20.120.160 1 135 5.0E-36 T 17-10-2018 IPR036641 HPT domain superfamily GO:0000160 BJD13_02300 ede1a247c97fa370b1aab7ff4709b15a 669 Gene3D G3DSA:1.10.287.560 287 347 3.7E-9 T 17-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 BJD13_02300 ede1a247c97fa370b1aab7ff4709b15a 669 Gene3D G3DSA:3.30.565.10 348 532 8.3E-54 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_02300 ede1a247c97fa370b1aab7ff4709b15a 669 Gene3D G3DSA:2.40.50.180 556 612 4.5E-31 T 17-10-2018 BJD13_02300 ede1a247c97fa370b1aab7ff4709b15a 669 SUPERFAMILY SSF47384 288 348 1.29E-10 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD13_18125 7e115e3e7ca9e796abb8507c63b073fa 647 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 1 644 52.679 T 17-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 BJD13_18125 7e115e3e7ca9e796abb8507c63b073fa 647 Gene3D G3DSA:3.30.300.30 517 646 4.8E-31 T 17-10-2018 BJD13_18125 7e115e3e7ca9e796abb8507c63b073fa 647 ProSitePatterns PS00455 Putative AMP-binding domain signature. 260 271 - T 17-10-2018 IPR020845 AMP-binding, conserved site BJD13_18125 7e115e3e7ca9e796abb8507c63b073fa 647 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 22 79 2.6E-20 T 17-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 BJD13_18125 7e115e3e7ca9e796abb8507c63b073fa 647 Gene3D G3DSA:3.40.50.12780 48 514 3.3E-101 T 17-10-2018 BJD13_18125 7e115e3e7ca9e796abb8507c63b073fa 647 SUPERFAMILY SSF56801 15 641 1.96E-182 T 17-10-2018 BJD13_18125 7e115e3e7ca9e796abb8507c63b073fa 647 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 19 642 0.0 T 17-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 BJD13_18125 7e115e3e7ca9e796abb8507c63b073fa 647 Pfam PF00501 AMP-binding enzyme 81 521 2.0E-92 T 17-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BJD13_18125 7e115e3e7ca9e796abb8507c63b073fa 647 Pfam PF13193 AMP-binding enzyme C-terminal domain 530 608 2.1E-25 T 17-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BJD13_09250 30abffcc57c8fde72ee680f013406ce2 211 SUPERFAMILY SSF52833 3 84 7.33E-21 T 17-10-2018 IPR036249 Thioredoxin-like superfamily BJD13_09250 30abffcc57c8fde72ee680f013406ce2 211 Pfam PF14497 Glutathione S-transferase, C-terminal domain 111 199 3.2E-8 T 17-10-2018 IPR004046 Glutathione S-transferase, C-terminal BJD13_09250 30abffcc57c8fde72ee680f013406ce2 211 Gene3D G3DSA:3.40.30.10 5 201 1.0E-61 T 17-10-2018 BJD13_09250 30abffcc57c8fde72ee680f013406ce2 211 SUPERFAMILY SSF47616 82 202 1.39E-23 T 17-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily BJD13_09250 30abffcc57c8fde72ee680f013406ce2 211 Gene3D G3DSA:1.20.1050.10 83 195 1.0E-61 T 17-10-2018 BJD13_09250 30abffcc57c8fde72ee680f013406ce2 211 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 70 1.1E-12 T 17-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 BJD13_21870 c319af9b26063d263eff4ed423cc3a71 357 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 244 263 - T 17-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 BJD13_21870 c319af9b26063d263eff4ed423cc3a71 357 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 4 352 2.0E-158 T 17-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 BJD13_21870 c319af9b26063d263eff4ed423cc3a71 357 SMART SM01329 4 353 5.3E-209 T 17-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 BJD13_21870 c319af9b26063d263eff4ed423cc3a71 357 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 3 357 52.732 T 17-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 BJD13_21870 c319af9b26063d263eff4ed423cc3a71 357 Gene3D G3DSA:3.40.718.10 1 357 4.2E-150 T 17-10-2018 BJD13_21870 c319af9b26063d263eff4ed423cc3a71 357 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 353 2.3E-136 T 17-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 BJD13_21870 c319af9b26063d263eff4ed423cc3a71 357 SUPERFAMILY SSF53659 1 357 8.26E-125 T 17-10-2018 BJD13_20810 094f2202d0328814fcb58098b7f8a0b8 335 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD13_20810 094f2202d0328814fcb58098b7f8a0b8 335 Pfam PF00005 ABC transporter 21 169 1.9E-34 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD13_20810 094f2202d0328814fcb58098b7f8a0b8 335 SMART SM00930 260 333 5.0E-25 T 17-10-2018 IPR018449 NIL domain BJD13_20810 094f2202d0328814fcb58098b7f8a0b8 335 SUPERFAMILY SSF52540 1 240 1.05E-83 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_20810 094f2202d0328814fcb58098b7f8a0b8 335 Gene3D G3DSA:3.30.70.260 246 334 1.1E-15 T 17-10-2018 BJD13_20810 094f2202d0328814fcb58098b7f8a0b8 335 SMART SM00382 30 217 1.3E-18 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_20810 094f2202d0328814fcb58098b7f8a0b8 335 SUPERFAMILY SSF55021 260 333 9.96E-17 T 17-10-2018 BJD13_20810 094f2202d0328814fcb58098b7f8a0b8 335 Pfam PF09383 NIL domain 262 331 6.2E-19 T 17-10-2018 IPR018449 NIL domain BJD13_20810 094f2202d0328814fcb58098b7f8a0b8 335 Gene3D G3DSA:3.40.50.300 1 245 1.7E-77 T 17-10-2018 BJD13_07145 eba7efe28a9135fee0fa704155075da2 476 PIRSF PIRSF006060 10 475 8.6E-95 T 17-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BJD13_07145 eba7efe28a9135fee0fa704155075da2 476 Gene3D G3DSA:1.20.1740.10 23 474 6.7E-122 T 17-10-2018 BJD13_07145 eba7efe28a9135fee0fa704155075da2 476 Pfam PF13520 Amino acid permease 27 441 1.8E-61 T 17-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BJD13_04970 48ad7ab882a8df98e917ff4cbfef305a 521 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 6 521 55.454 T 17-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 BJD13_04970 48ad7ab882a8df98e917ff4cbfef305a 521 PRINTS PR00096 Glutamine amidotransferase superfamily signature 53 62 1.5E-7 T 17-10-2018 BJD13_04970 48ad7ab882a8df98e917ff4cbfef305a 521 PRINTS PR00096 Glutamine amidotransferase superfamily signature 80 91 1.5E-7 T 17-10-2018 BJD13_04970 48ad7ab882a8df98e917ff4cbfef305a 521 PRINTS PR00096 Glutamine amidotransferase superfamily signature 173 186 1.5E-7 T 17-10-2018 BJD13_04970 48ad7ab882a8df98e917ff4cbfef305a 521 SUPERFAMILY SSF54810 401 521 1.7E-49 T 17-10-2018 BJD13_04970 48ad7ab882a8df98e917ff4cbfef305a 521 Pfam PF02540 NAD synthase 211 295 1.8E-8 T 17-10-2018 IPR022310 NAD/GMP synthase BJD13_04970 48ad7ab882a8df98e917ff4cbfef305a 521 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 208 521 2.9E-150 T 17-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 BJD13_04970 48ad7ab882a8df98e917ff4cbfef305a 521 PRINTS PR00097 Anthranilate synthase component II signature 80 91 3.5E-6 T 17-10-2018 BJD13_04970 48ad7ab882a8df98e917ff4cbfef305a 521 PRINTS PR00097 Anthranilate synthase component II signature 53 62 3.5E-6 T 17-10-2018 BJD13_04970 48ad7ab882a8df98e917ff4cbfef305a 521 PRINTS PR00097 Anthranilate synthase component II signature 173 186 3.5E-6 T 17-10-2018 BJD13_04970 48ad7ab882a8df98e917ff4cbfef305a 521 Gene3D G3DSA:3.40.50.620 205 401 1.3E-75 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD13_04970 48ad7ab882a8df98e917ff4cbfef305a 521 Gene3D G3DSA:3.30.300.10 402 521 9.6E-51 T 17-10-2018 BJD13_04970 48ad7ab882a8df98e917ff4cbfef305a 521 SUPERFAMILY SSF52317 4 201 1.42E-54 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD13_04970 48ad7ab882a8df98e917ff4cbfef305a 521 Gene3D G3DSA:3.40.50.880 8 202 2.3E-52 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD13_04970 48ad7ab882a8df98e917ff4cbfef305a 521 Pfam PF00117 Glutamine amidotransferase class-I 11 196 6.4E-39 T 17-10-2018 IPR017926 Glutamine amidotransferase BJD13_04970 48ad7ab882a8df98e917ff4cbfef305a 521 SUPERFAMILY SSF52402 193 415 9.04E-59 T 17-10-2018 BJD13_04970 48ad7ab882a8df98e917ff4cbfef305a 521 Pfam PF00958 GMP synthase C terminal domain 429 520 1.5E-42 T 17-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 BJD13_04970 48ad7ab882a8df98e917ff4cbfef305a 521 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 50 64 2.7E-6 T 17-10-2018 BJD13_04970 48ad7ab882a8df98e917ff4cbfef305a 521 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 9 23 2.7E-6 T 17-10-2018 BJD13_04970 48ad7ab882a8df98e917ff4cbfef305a 521 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 80 96 2.7E-6 T 17-10-2018 BJD13_04970 48ad7ab882a8df98e917ff4cbfef305a 521 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 9 200 1.0E-74 T 17-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 BJD13_11800 62daab23d1271f12095d2da269f76b2e 332 Gene3D G3DSA:3.30.1360.10 17 227 5.6E-83 T 17-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD13_11800 62daab23d1271f12095d2da269f76b2e 332 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 154 1.7E-24 T 17-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD13_11800 62daab23d1271f12095d2da269f76b2e 332 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 255 326 2.0E-35 T 17-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD13_11800 62daab23d1271f12095d2da269f76b2e 332 Gene3D G3DSA:1.10.150.20 245 328 4.1E-36 T 17-10-2018 BJD13_11800 62daab23d1271f12095d2da269f76b2e 332 SUPERFAMILY SSF55257 9 232 1.96E-31 T 17-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD13_11800 62daab23d1271f12095d2da269f76b2e 332 SUPERFAMILY SSF47789 250 323 1.83E-25 T 17-10-2018 BJD13_11800 62daab23d1271f12095d2da269f76b2e 332 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 251 307 1.3E-23 T 17-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD13_11800 62daab23d1271f12095d2da269f76b2e 332 SUPERFAMILY SSF56553 53 177 2.35E-42 T 17-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD13_11800 62daab23d1271f12095d2da269f76b2e 332 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 316 34.74 T 17-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD13_11800 62daab23d1271f12095d2da269f76b2e 332 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 315 4.2E-109 T 17-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD13_11800 62daab23d1271f12095d2da269f76b2e 332 Gene3D G3DSA:2.170.120.12 53 176 5.6E-83 T 17-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD13_11800 62daab23d1271f12095d2da269f76b2e 332 SMART SM00662 23 233 1.2E-106 T 17-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD13_11800 62daab23d1271f12095d2da269f76b2e 332 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 227 1.7E-24 T 17-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD13_21035 d01119234e756f74fb1b7c380cea9da7 402 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 359 2.1E-23 T 17-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal BJD13_21035 d01119234e756f74fb1b7c380cea9da7 402 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 244 9.0E-46 T 17-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal BJD13_21035 d01119234e756f74fb1b7c380cea9da7 402 SMART SM00825 Beta-ketoacyl synthase 4 402 6.1E-12 T 17-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BJD13_21035 d01119234e756f74fb1b7c380cea9da7 402 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 17-10-2018 IPR018201 Beta-ketoacyl synthase, active site BJD13_21035 d01119234e756f74fb1b7c380cea9da7 402 SUPERFAMILY SSF53901 1 251 1.56E-64 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 BJD13_21035 d01119234e756f74fb1b7c380cea9da7 402 Gene3D G3DSA:3.40.47.10 258 402 9.6E-44 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 BJD13_21035 d01119234e756f74fb1b7c380cea9da7 402 Gene3D G3DSA:3.40.47.10 1 252 8.9E-65 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 BJD13_21035 d01119234e756f74fb1b7c380cea9da7 402 SUPERFAMILY SSF53901 213 400 3.5E-58 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 BJD13_06640 ed90e0fbfb5a3e6f3aeab6b52d92bd58 973 Pfam PF07494 Two component regulator propeller 40 62 4.1E-4 T 17-10-2018 IPR011110 Two component regulator propeller BJD13_06640 ed90e0fbfb5a3e6f3aeab6b52d92bd58 973 SMART SM00267 794 963 2.3E-47 T 17-10-2018 IPR000160 GGDEF domain BJD13_06640 ed90e0fbfb5a3e6f3aeab6b52d92bd58 973 Gene3D G3DSA:2.130.10.10 356 630 3.4E-26 T 17-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BJD13_06640 ed90e0fbfb5a3e6f3aeab6b52d92bd58 973 SUPERFAMILY SSF63829 390 580 1.64E-14 T 17-10-2018 BJD13_06640 ed90e0fbfb5a3e6f3aeab6b52d92bd58 973 SUPERFAMILY SSF50998 82 488 2.59E-10 T 17-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily BJD13_06640 ed90e0fbfb5a3e6f3aeab6b52d92bd58 973 Gene3D G3DSA:2.130.10.10 26 76 1.8E-6 T 17-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BJD13_06640 ed90e0fbfb5a3e6f3aeab6b52d92bd58 973 Gene3D G3DSA:2.130.10.10 77 340 1.8E-14 T 17-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BJD13_06640 ed90e0fbfb5a3e6f3aeab6b52d92bd58 973 SUPERFAMILY SSF55073 810 960 1.73E-42 T 17-10-2018 IPR029787 Nucleotide cyclase BJD13_06640 ed90e0fbfb5a3e6f3aeab6b52d92bd58 973 Pfam PF07495 Y_Y_Y domain 676 734 2.3E-12 T 17-10-2018 IPR011123 Two component regulator three Y BJD13_06640 ed90e0fbfb5a3e6f3aeab6b52d92bd58 973 Pfam PF00990 Diguanylate cyclase, GGDEF domain 805 959 5.3E-39 T 17-10-2018 IPR000160 GGDEF domain BJD13_06640 ed90e0fbfb5a3e6f3aeab6b52d92bd58 973 Gene3D G3DSA:2.60.40.10 655 745 1.5E-11 T 17-10-2018 IPR013783 Immunoglobulin-like fold BJD13_06640 ed90e0fbfb5a3e6f3aeab6b52d92bd58 973 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 803 962 1.7E-39 T 17-10-2018 IPR000160 GGDEF domain BJD13_06640 ed90e0fbfb5a3e6f3aeab6b52d92bd58 973 Gene3D G3DSA:3.30.70.270 790 963 2.3E-50 T 17-10-2018 BJD13_12850 916956cc77c65118c4701981a4c95b99 622 Pfam PF03717 Penicillin-binding Protein dimerisation domain 62 209 7.5E-20 T 17-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 BJD13_12850 916956cc77c65118c4701981a4c95b99 622 Gene3D G3DSA:3.90.1310.30 53 225 5.6E-50 T 17-10-2018 BJD13_12850 916956cc77c65118c4701981a4c95b99 622 Gene3D G3DSA:3.40.710.10 286 467 1.6E-111 T 17-10-2018 BJD13_12850 916956cc77c65118c4701981a4c95b99 622 Gene3D G3DSA:3.30.450.330 226 550 1.6E-111 T 17-10-2018 BJD13_12850 916956cc77c65118c4701981a4c95b99 622 SUPERFAMILY SSF56519 57 224 5.76E-47 T 17-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 BJD13_12850 916956cc77c65118c4701981a4c95b99 622 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 13 561 43.346 T 17-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BJD13_12850 916956cc77c65118c4701981a4c95b99 622 Pfam PF00905 Penicillin binding protein transpeptidase domain 250 546 9.7E-81 T 17-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 BJD13_12850 916956cc77c65118c4701981a4c95b99 622 SUPERFAMILY SSF56601 177 572 1.47E-95 T 17-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BJD13_24110 8a34ca267c85b29424bde5f4e41c3726 216 Gene3D G3DSA:3.40.50.1390 10 173 5.4E-27 T 17-10-2018 BJD13_24110 8a34ca267c85b29424bde5f4e41c3726 216 Pfam PF00239 Resolvase, N terminal domain 13 165 2.3E-22 T 17-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 BJD13_24110 8a34ca267c85b29424bde5f4e41c3726 216 SUPERFAMILY SSF53041 11 165 2.22E-26 T 17-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 BJD13_24110 8a34ca267c85b29424bde5f4e41c3726 216 ProSitePatterns PS00398 Site-specific recombinases signature 2. 70 82 - T 17-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 BJD13_24110 8a34ca267c85b29424bde5f4e41c3726 216 SMART SM00857 12 165 1.3E-26 T 17-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 BJD13_17215 d1280442aeb665c530c224ccde1fc4ce 1350 Pfam PF13361 UvrD-like helicase C-terminal domain 727 894 2.3E-14 T 17-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 BJD13_17215 d1280442aeb665c530c224ccde1fc4ce 1350 Gene3D G3DSA:1.10.486.10 654 797 1.8E-105 T 17-10-2018 BJD13_17215 d1280442aeb665c530c224ccde1fc4ce 1350 SUPERFAMILY SSF52540 14 895 3.68E-92 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_17215 d1280442aeb665c530c224ccde1fc4ce 1350 Gene3D G3DSA:3.40.50.300 511 904 1.8E-105 T 17-10-2018 BJD13_17215 d1280442aeb665c530c224ccde1fc4ce 1350 SUPERFAMILY SSF52980 960 1229 2.95E-52 T 17-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 BJD13_17215 d1280442aeb665c530c224ccde1fc4ce 1350 Pfam PF00580 UvrD/REP helicase N-terminal domain 15 498 8.1E-48 T 17-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 BJD13_17215 d1280442aeb665c530c224ccde1fc4ce 1350 Pfam PF13361 UvrD-like helicase C-terminal domain 623 685 3.0E-6 T 17-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 BJD13_17215 d1280442aeb665c530c224ccde1fc4ce 1350 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1015 1200 7.0E-6 T 17-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type BJD13_17215 d1280442aeb665c530c224ccde1fc4ce 1350 Gene3D G3DSA:3.90.320.10 949 1248 3.1E-64 T 17-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal BJD13_17215 d1280442aeb665c530c224ccde1fc4ce 1350 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 11 1228 3.1E-211 T 17-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 BJD13_17215 d1280442aeb665c530c224ccde1fc4ce 1350 Gene3D G3DSA:3.40.50.300 272 503 5.4E-26 T 17-10-2018 BJD13_17215 d1280442aeb665c530c224ccde1fc4ce 1350 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 6 1308 18.694 T 17-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 BJD13_09320 08341d100d868210a4e1c84e7c1e8590 729 PRINTS PR00133 Glycosyl hydrolase family 3 signature 186 202 3.7E-27 T 17-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BJD13_09320 08341d100d868210a4e1c84e7c1e8590 729 PRINTS PR00133 Glycosyl hydrolase family 3 signature 109 128 3.7E-27 T 17-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BJD13_09320 08341d100d868210a4e1c84e7c1e8590 729 PRINTS PR00133 Glycosyl hydrolase family 3 signature 79 95 3.7E-27 T 17-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BJD13_09320 08341d100d868210a4e1c84e7c1e8590 729 PRINTS PR00133 Glycosyl hydrolase family 3 signature 256 274 3.7E-27 T 17-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BJD13_09320 08341d100d868210a4e1c84e7c1e8590 729 PRINTS PR00133 Glycosyl hydrolase family 3 signature 155 171 3.7E-27 T 17-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BJD13_09320 08341d100d868210a4e1c84e7c1e8590 729 SUPERFAMILY SSF52279 362 614 5.1E-52 T 17-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 BJD13_09320 08341d100d868210a4e1c84e7c1e8590 729 SUPERFAMILY SSF51445 21 349 3.16E-84 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily BJD13_09320 08341d100d868210a4e1c84e7c1e8590 729 Pfam PF14310 Fibronectin type III-like domain 645 711 6.9E-13 T 17-10-2018 IPR026891 Fibronectin type III-like domain BJD13_09320 08341d100d868210a4e1c84e7c1e8590 729 Gene3D G3DSA:3.40.50.1700 351 613 1.6E-70 T 17-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 BJD13_09320 08341d100d868210a4e1c84e7c1e8590 729 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 362 611 3.1E-59 T 17-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 BJD13_09320 08341d100d868210a4e1c84e7c1e8590 729 Gene3D G3DSA:2.60.40.10 614 728 1.2E-22 T 17-10-2018 IPR013783 Immunoglobulin-like fold BJD13_09320 08341d100d868210a4e1c84e7c1e8590 729 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 79 327 1.0E-38 T 17-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BJD13_09320 08341d100d868210a4e1c84e7c1e8590 729 Gene3D G3DSA:3.20.20.300 13 334 1.9E-98 T 17-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 BJD13_09320 08341d100d868210a4e1c84e7c1e8590 729 SMART SM01217 644 712 4.0E-16 T 17-10-2018 IPR026891 Fibronectin type III-like domain BJD13_10230 65255ddb0f48e01eb387d8b81559166e 1057 SUPERFAMILY SSF55874 422 590 1.83E-45 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_10230 65255ddb0f48e01eb387d8b81559166e 1057 PRINTS PR00344 Bacterial sensor protein C-terminal signature 576 589 6.1E-17 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_10230 65255ddb0f48e01eb387d8b81559166e 1057 PRINTS PR00344 Bacterial sensor protein C-terminal signature 552 570 6.1E-17 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_10230 65255ddb0f48e01eb387d8b81559166e 1057 PRINTS PR00344 Bacterial sensor protein C-terminal signature 517 531 6.1E-17 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_10230 65255ddb0f48e01eb387d8b81559166e 1057 PRINTS PR00344 Bacterial sensor protein C-terminal signature 535 545 6.1E-17 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_10230 65255ddb0f48e01eb387d8b81559166e 1057 Gene3D G3DSA:3.30.565.10 434 592 1.1E-48 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_10230 65255ddb0f48e01eb387d8b81559166e 1057 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 481 590 2.1E-30 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_10230 65255ddb0f48e01eb387d8b81559166e 1057 Pfam PF00072 Response regulator receiver domain 794 903 1.4E-14 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_10230 65255ddb0f48e01eb387d8b81559166e 1057 Pfam PF00072 Response regulator receiver domain 939 1048 7.9E-29 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_10230 65255ddb0f48e01eb387d8b81559166e 1057 Pfam PF00072 Response regulator receiver domain 671 779 5.2E-16 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_10230 65255ddb0f48e01eb387d8b81559166e 1057 SUPERFAMILY SSF52172 668 784 8.82E-26 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_10230 65255ddb0f48e01eb387d8b81559166e 1057 SUPERFAMILY SSF52172 792 913 6.55E-20 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_10230 65255ddb0f48e01eb387d8b81559166e 1057 Gene3D G3DSA:1.10.287.130 352 433 2.5E-22 T 17-10-2018 BJD13_10230 65255ddb0f48e01eb387d8b81559166e 1057 Gene3D G3DSA:3.40.50.12740 791 937 1.7E-17 T 17-10-2018 BJD13_10230 65255ddb0f48e01eb387d8b81559166e 1057 Gene3D G3DSA:3.40.50.12740 669 790 1.1E-26 T 17-10-2018 BJD13_10230 65255ddb0f48e01eb387d8b81559166e 1057 Gene3D G3DSA:3.40.50.12740 938 1057 1.1E-42 T 17-10-2018 BJD13_10230 65255ddb0f48e01eb387d8b81559166e 1057 SUPERFAMILY SSF47384 352 434 4.12E-20 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD13_10230 65255ddb0f48e01eb387d8b81559166e 1057 SUPERFAMILY SSF55781 127 296 1.85E-19 T 17-10-2018 BJD13_10230 65255ddb0f48e01eb387d8b81559166e 1057 SUPERFAMILY SSF52172 935 1055 2.42E-39 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_10230 65255ddb0f48e01eb387d8b81559166e 1057 Pfam PF00512 His Kinase A (phospho-acceptor) domain 366 433 4.7E-18 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_10230 65255ddb0f48e01eb387d8b81559166e 1057 Gene3D G3DSA:3.30.450.40 106 278 4.0E-17 T 17-10-2018 IPR029016 GAF-like domain superfamily BJD13_10230 65255ddb0f48e01eb387d8b81559166e 1057 SMART SM00065 133 276 1.1E-10 T 17-10-2018 IPR003018 GAF domain GO:0005515 BJD13_10230 65255ddb0f48e01eb387d8b81559166e 1057 Pfam PF13185 GAF domain 132 266 1.6E-11 T 17-10-2018 IPR003018 GAF domain GO:0005515 BJD13_10230 65255ddb0f48e01eb387d8b81559166e 1057 SMART SM00388 365 433 1.2E-22 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_10230 65255ddb0f48e01eb387d8b81559166e 1057 SMART SM00448 937 1050 1.6E-37 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_10230 65255ddb0f48e01eb387d8b81559166e 1057 SMART SM00448 669 779 2.9E-19 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_10230 65255ddb0f48e01eb387d8b81559166e 1057 SMART SM00448 791 905 8.1E-15 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_10230 65255ddb0f48e01eb387d8b81559166e 1057 SMART SM00387 480 592 4.2E-39 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_22760 fc5e5cb2330adcc6a804b3b4f8eafb8c 291 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 9.0E-37 T 17-10-2018 BJD13_22760 fc5e5cb2330adcc6a804b3b4f8eafb8c 291 PRINTS PR01798 Succinyl-CoA synthase signature 242 259 9.0E-37 T 17-10-2018 BJD13_22760 fc5e5cb2330adcc6a804b3b4f8eafb8c 291 PRINTS PR01798 Succinyl-CoA synthase signature 179 197 9.0E-37 T 17-10-2018 BJD13_22760 fc5e5cb2330adcc6a804b3b4f8eafb8c 291 PRINTS PR01798 Succinyl-CoA synthase signature 210 223 9.0E-37 T 17-10-2018 BJD13_22760 fc5e5cb2330adcc6a804b3b4f8eafb8c 291 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 238 251 - T 17-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site BJD13_22760 fc5e5cb2330adcc6a804b3b4f8eafb8c 291 SUPERFAMILY SSF52210 125 290 4.45E-56 T 17-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BJD13_22760 fc5e5cb2330adcc6a804b3b4f8eafb8c 291 SMART SM00881 4 100 2.3E-37 T 17-10-2018 IPR003781 CoA-binding GO:0048037 BJD13_22760 fc5e5cb2330adcc6a804b3b4f8eafb8c 291 Pfam PF00549 CoA-ligase 153 273 6.8E-19 T 17-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BJD13_22760 fc5e5cb2330adcc6a804b3b4f8eafb8c 291 Gene3D G3DSA:3.40.50.720 2 125 6.0E-51 T 17-10-2018 BJD13_22760 fc5e5cb2330adcc6a804b3b4f8eafb8c 291 Gene3D G3DSA:3.40.50.261 126 291 3.3E-72 T 17-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BJD13_22760 fc5e5cb2330adcc6a804b3b4f8eafb8c 291 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 154 183 - T 17-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site BJD13_22760 fc5e5cb2330adcc6a804b3b4f8eafb8c 291 Pfam PF02629 CoA binding domain 6 99 1.0E-30 T 17-10-2018 IPR003781 CoA-binding GO:0048037 BJD13_22760 fc5e5cb2330adcc6a804b3b4f8eafb8c 291 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 290 43.375 T 17-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BJD13_22760 fc5e5cb2330adcc6a804b3b4f8eafb8c 291 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 289 6.8E-139 T 17-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BJD13_22760 fc5e5cb2330adcc6a804b3b4f8eafb8c 291 SUPERFAMILY SSF51735 1 124 2.67E-43 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_22760 fc5e5cb2330adcc6a804b3b4f8eafb8c 291 PIRSF PIRSF001553 1 291 4.4E-130 T 17-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BJD13_08315 0a01957b67ddbd338a0c4603976a1131 338 Gene3D G3DSA:1.10.10.10 7 96 2.0E-24 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_08315 0a01957b67ddbd338a0c4603976a1131 338 Pfam PF03466 LysR substrate binding domain 93 300 3.3E-40 T 17-10-2018 IPR005119 LysR, substrate-binding BJD13_08315 0a01957b67ddbd338a0c4603976a1131 338 Gene3D G3DSA:3.40.190.10 97 298 3.8E-59 T 17-10-2018 BJD13_08315 0a01957b67ddbd338a0c4603976a1131 338 Gene3D G3DSA:3.40.190.10 170 271 3.8E-59 T 17-10-2018 BJD13_08315 0a01957b67ddbd338a0c4603976a1131 338 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 7.3E-16 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_08315 0a01957b67ddbd338a0c4603976a1131 338 SUPERFAMILY SSF46785 8 92 1.82E-19 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_08315 0a01957b67ddbd338a0c4603976a1131 338 SUPERFAMILY SSF53850 94 304 9.31E-41 T 17-10-2018 BJD13_02320 72bba7f20dc5a18ee1b20dbc8c3cf027 302 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 1 288 39.635 T 17-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 BJD13_02320 72bba7f20dc5a18ee1b20dbc8c3cf027 302 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 32 298 2.0E-95 T 17-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 BJD13_02320 72bba7f20dc5a18ee1b20dbc8c3cf027 302 SUPERFAMILY SSF53335 8 297 7.31E-80 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_02320 72bba7f20dc5a18ee1b20dbc8c3cf027 302 Gene3D G3DSA:3.40.50.150 1 302 3.3E-105 T 17-10-2018 BJD13_00235 11df187142af0f9f4d736e8439da078d 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 30 44 3.3E-8 T 17-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD13_00235 11df187142af0f9f4d736e8439da078d 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 60 3.3E-8 T 17-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD13_00235 11df187142af0f9f4d736e8439da078d 241 SMART SM00866 91 228 6.0E-31 T 17-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 BJD13_00235 11df187142af0f9f4d736e8439da078d 241 SUPERFAMILY SSF64288 58 234 5.02E-42 T 17-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily BJD13_00235 11df187142af0f9f4d736e8439da078d 241 Gene3D G3DSA:1.10.10.10 4 71 2.4E-22 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_00235 11df187142af0f9f4d736e8439da078d 241 SUPERFAMILY SSF46785 3 74 8.34E-20 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_00235 11df187142af0f9f4d736e8439da078d 241 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 70 3.4E-17 T 17-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD13_00235 11df187142af0f9f4d736e8439da078d 241 Gene3D G3DSA:3.40.1410.10 73 231 6.3E-34 T 17-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily BJD13_00235 11df187142af0f9f4d736e8439da078d 241 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 6 233 1.1E-88 T 17-10-2018 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 BJD13_00235 11df187142af0f9f4d736e8439da078d 241 Pfam PF07702 UTRA domain 92 228 1.4E-32 T 17-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 BJD13_00235 11df187142af0f9f4d736e8439da078d 241 SMART SM00345 11 70 2.3E-15 T 17-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD13_22380 a37db760e9d9054262718b8100c9f4a4 170 TIGRFAM TIGR02246 TIGR02246: conserved hypothetical protein 36 159 2.6E-41 T 17-10-2018 IPR011944 Steroid delta5-4-isomerase KEGG: 00140+5.3.3.1|KEGG: 00984+5.3.3.1|MetaCyc: PWY-2582|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-699|MetaCyc: PWY-7299 BJD13_22380 a37db760e9d9054262718b8100c9f4a4 170 SUPERFAMILY SSF54427 36 158 5.47E-32 T 17-10-2018 IPR032710 NTF2-like domain superfamily BJD13_22380 a37db760e9d9054262718b8100c9f4a4 170 PIRSF PIRSF028470 1 162 9.9E-73 T 17-10-2018 IPR016887 Uncharacterised conserved protein UCP028470, steroid isomerase-related BJD13_22380 a37db760e9d9054262718b8100c9f4a4 170 Gene3D G3DSA:3.10.450.50 19 169 3.4E-56 T 17-10-2018 BJD13_22380 a37db760e9d9054262718b8100c9f4a4 170 Pfam PF08332 Calcium/calmodulin dependent protein kinase II association domain 36 159 1.5E-46 T 17-10-2018 IPR013543 Calcium/calmodulin-dependent protein kinase II, association-domain GO:0004683|GO:0005516|GO:0006468 Reactome: R-HSA-3371571|Reactome: R-HSA-399719|Reactome: R-HSA-438066|Reactome: R-HSA-442729|Reactome: R-HSA-442742|Reactome: R-HSA-442982|Reactome: R-HSA-5576892|Reactome: R-HSA-5578775|Reactome: R-HSA-5673001|Reactome: R-HSA-877300|Reactome: R-HSA-936837 BJD13_19650 2e04c9ffe4206e43b6a9e5d88840fd87 268 Gene3D G3DSA:3.40.80.10 32 185 3.5E-47 T 17-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BJD13_19650 2e04c9ffe4206e43b6a9e5d88840fd87 268 SUPERFAMILY SSF55846 36 189 9.95E-48 T 17-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BJD13_19650 2e04c9ffe4206e43b6a9e5d88840fd87 268 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 50 174 1.3E-28 T 17-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BJD13_19650 2e04c9ffe4206e43b6a9e5d88840fd87 268 SMART SM00644 38 173 2.3E-27 T 17-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BJD13_13450 10c2c9fae824601d00429027f5b4de0c 348 Pfam PF10282 Lactonase, 7-bladed beta-propeller 54 199 4.1E-5 T 17-10-2018 IPR019405 Lactonase, 7-bladed beta propeller BJD13_13450 10c2c9fae824601d00429027f5b4de0c 348 Pfam PF10282 Lactonase, 7-bladed beta-propeller 212 325 6.0E-10 T 17-10-2018 IPR019405 Lactonase, 7-bladed beta propeller BJD13_13450 10c2c9fae824601d00429027f5b4de0c 348 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 306 346 1.7E-16 T 17-10-2018 IPR011964 YVTN beta-propeller repeat BJD13_13450 10c2c9fae824601d00429027f5b4de0c 348 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 265 301 1.8E-10 T 17-10-2018 IPR011964 YVTN beta-propeller repeat BJD13_13450 10c2c9fae824601d00429027f5b4de0c 348 Gene3D G3DSA:2.130.10.10 27 84 6.3E-6 T 17-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BJD13_13450 10c2c9fae824601d00429027f5b4de0c 348 SUPERFAMILY SSF50974 34 346 6.54E-69 T 17-10-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 BJD13_13450 10c2c9fae824601d00429027f5b4de0c 348 Gene3D G3DSA:2.130.10.10 85 148 3.3E-7 T 17-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BJD13_13450 10c2c9fae824601d00429027f5b4de0c 348 Gene3D G3DSA:2.130.10.10 149 348 1.9E-53 T 17-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BJD13_16840 7e73982d2fb4bf4ae64f6b4f0850d576 350 SUPERFAMILY SSF51445 36 342 3.01E-78 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily BJD13_16840 7e73982d2fb4bf4ae64f6b4f0850d576 350 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 160 169 - T 17-10-2018 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 BJD13_16840 7e73982d2fb4bf4ae64f6b4f0850d576 350 Gene3D G3DSA:3.20.20.80 35 350 8.9E-102 T 17-10-2018 BJD13_16840 7e73982d2fb4bf4ae64f6b4f0850d576 350 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 63 314 1.7E-51 T 17-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 BJD13_08635 2806adf5eff13807bbad716a2fd5e529 711 SMART SM00981 55 153 3.6E-21 T 17-10-2018 IPR004114 THUMP domain GO:0003723 BJD13_08635 2806adf5eff13807bbad716a2fd5e529 711 PIRSF PIRSF037618 1 711 1.6E-285 T 17-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 BJD13_08635 2806adf5eff13807bbad716a2fd5e529 711 Pfam PF02926 THUMP domain 30 152 4.7E-10 T 17-10-2018 IPR004114 THUMP domain GO:0003723 BJD13_08635 2806adf5eff13807bbad716a2fd5e529 711 Gene3D G3DSA:3.40.50.150 168 371 1.9E-134 T 17-10-2018 BJD13_08635 2806adf5eff13807bbad716a2fd5e529 711 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 485 663 2.2E-15 T 17-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 BJD13_08635 2806adf5eff13807bbad716a2fd5e529 711 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 3 711 29.797 T 17-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 BJD13_08635 2806adf5eff13807bbad716a2fd5e529 711 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 198 209 - T 17-10-2018 IPR000241 Putative RNA methylase domain BJD13_08635 2806adf5eff13807bbad716a2fd5e529 711 Gene3D G3DSA:3.40.50.150 496 711 2.5E-67 T 17-10-2018 BJD13_08635 2806adf5eff13807bbad716a2fd5e529 711 SUPERFAMILY SSF53335 401 705 3.17E-59 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_08635 2806adf5eff13807bbad716a2fd5e529 711 Gene3D G3DSA:3.30.750.80 397 495 2.2E-31 T 17-10-2018 BJD13_08635 2806adf5eff13807bbad716a2fd5e529 711 Pfam PF01170 Putative RNA methylase family UPF0020 161 372 1.0E-39 T 17-10-2018 IPR000241 Putative RNA methylase domain BJD13_08635 2806adf5eff13807bbad716a2fd5e529 711 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 308 314 - T 17-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 BJD13_08635 2806adf5eff13807bbad716a2fd5e529 711 Gene3D G3DSA:3.30.2130.30 4 259 1.9E-134 T 17-10-2018 BJD13_08635 2806adf5eff13807bbad716a2fd5e529 711 SUPERFAMILY SSF53335 143 375 3.96E-37 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_23540 8c42b3c6a62a47c811809c9ce9de96ce 816 Pfam PF13290 Chitobiase/beta-hexosaminidase C-terminal domain 586 638 7.2E-14 T 17-10-2018 BJD13_23540 8c42b3c6a62a47c811809c9ce9de96ce 816 SUPERFAMILY SSF55545 58 195 3.79E-24 T 17-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 BJD13_23540 8c42b3c6a62a47c811809c9ce9de96ce 816 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 65 193 3.2E-20 T 17-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal BJD13_23540 8c42b3c6a62a47c811809c9ce9de96ce 816 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 196 536 4.3E-119 T 17-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 BJD13_23540 8c42b3c6a62a47c811809c9ce9de96ce 816 Gene3D G3DSA:3.30.379.10 64 194 1.9E-28 T 17-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 BJD13_23540 8c42b3c6a62a47c811809c9ce9de96ce 816 Gene3D G3DSA:3.20.20.80 195 535 5.9E-130 T 17-10-2018 BJD13_23540 8c42b3c6a62a47c811809c9ce9de96ce 816 SUPERFAMILY SSF51445 196 549 2.7E-121 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily BJD13_23540 8c42b3c6a62a47c811809c9ce9de96ce 816 PRINTS PR00738 Glycosyl hydrolase family 20 signature 190 207 8.7E-42 T 17-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BJD13_23540 8c42b3c6a62a47c811809c9ce9de96ce 816 PRINTS PR00738 Glycosyl hydrolase family 20 signature 500 516 8.7E-42 T 17-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BJD13_23540 8c42b3c6a62a47c811809c9ce9de96ce 816 PRINTS PR00738 Glycosyl hydrolase family 20 signature 286 303 8.7E-42 T 17-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BJD13_23540 8c42b3c6a62a47c811809c9ce9de96ce 816 PRINTS PR00738 Glycosyl hydrolase family 20 signature 518 535 8.7E-42 T 17-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BJD13_23540 8c42b3c6a62a47c811809c9ce9de96ce 816 PRINTS PR00738 Glycosyl hydrolase family 20 signature 219 240 8.7E-42 T 17-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BJD13_23540 8c42b3c6a62a47c811809c9ce9de96ce 816 PRINTS PR00738 Glycosyl hydrolase family 20 signature 334 352 8.7E-42 T 17-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BJD13_23540 8c42b3c6a62a47c811809c9ce9de96ce 816 PRINTS PR00738 Glycosyl hydrolase family 20 signature 356 369 8.7E-42 T 17-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BJD13_23540 8c42b3c6a62a47c811809c9ce9de96ce 816 PRINTS PR00738 Glycosyl hydrolase family 20 signature 153 173 8.7E-42 T 17-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 BJD13_23540 8c42b3c6a62a47c811809c9ce9de96ce 816 Gene3D G3DSA:2.60.120.260 715 803 2.4E-5 T 17-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD13_13505 d1bcc410ee28aa3b96f1f7f214105a05 362 SUPERFAMILY SSF111369 64 137 5.75E-11 T 17-10-2018 BJD13_13505 d1bcc410ee28aa3b96f1f7f214105a05 362 Gene3D G3DSA:1.10.287.470 128 197 1.4E-9 T 17-10-2018 BJD13_13505 d1bcc410ee28aa3b96f1f7f214105a05 362 Gene3D G3DSA:1.10.287.470 97 123 4.9E-14 T 17-10-2018 BJD13_13505 d1bcc410ee28aa3b96f1f7f214105a05 362 Gene3D G3DSA:2.40.30.170 243 361 8.4E-37 T 17-10-2018 BJD13_13505 d1bcc410ee28aa3b96f1f7f214105a05 362 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 62 306 1.1E-15 T 17-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BJD13_13505 d1bcc410ee28aa3b96f1f7f214105a05 362 Gene3D G3DSA:2.40.50.100 65 96 4.9E-14 T 17-10-2018 BJD13_13505 d1bcc410ee28aa3b96f1f7f214105a05 362 SUPERFAMILY SSF111369 206 283 2.22E-11 T 17-10-2018 BJD13_03230 e7249a8de4e808c11e1fcaf781feddac 86 ProSitePatterns PS00362 Ribosomal protein S15 signature. 36 66 - T 17-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_03230 e7249a8de4e808c11e1fcaf781feddac 86 SMART SM01387 5 85 4.7E-50 T 17-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_03230 e7249a8de4e808c11e1fcaf781feddac 86 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 4 86 1.4E-37 T 17-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_03230 e7249a8de4e808c11e1fcaf781feddac 86 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 7 85 2.0E-39 T 17-10-2018 BJD13_03230 e7249a8de4e808c11e1fcaf781feddac 86 SUPERFAMILY SSF47060 4 86 2.85E-34 T 17-10-2018 IPR009068 S15/NS1, RNA-binding BJD13_03230 e7249a8de4e808c11e1fcaf781feddac 86 Pfam PF00312 Ribosomal protein S15 6 85 2.8E-37 T 17-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_03230 e7249a8de4e808c11e1fcaf781feddac 86 Gene3D G3DSA:1.10.287.10 2 86 7.3E-35 T 17-10-2018 BJD13_03230 e7249a8de4e808c11e1fcaf781feddac 86 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 1 86 21.612 T 17-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_05130 23e9f49bdb01b9a82524593c8ee9f604 194 Pfam PF00929 Exonuclease 12 173 1.1E-26 T 17-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BJD13_05130 23e9f49bdb01b9a82524593c8ee9f604 194 SMART SM00479 10 183 1.3E-13 T 17-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BJD13_05130 23e9f49bdb01b9a82524593c8ee9f604 194 Gene3D G3DSA:3.30.420.10 1 194 2.2E-73 T 17-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BJD13_05130 23e9f49bdb01b9a82524593c8ee9f604 194 SUPERFAMILY SSF53098 7 181 6.07E-46 T 17-10-2018 IPR012337 Ribonuclease H-like superfamily BJD13_05130 23e9f49bdb01b9a82524593c8ee9f604 194 Hamap MF_00045 Oligoribonuclease [orn]. 6 184 41.14 T 17-10-2018 IPR022894 Oligoribonuclease GO:0000175 BJD13_09780 55bca2ee48a828fbaa24a244cd62295a 111 Gene3D G3DSA:2.30.30.40 41 111 1.9E-31 T 17-10-2018 BJD13_09780 55bca2ee48a828fbaa24a244cd62295a 111 SUPERFAMILY SSF57783 3 37 9.78E-12 T 17-10-2018 BJD13_09780 55bca2ee48a828fbaa24a244cd62295a 111 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 4 111 2.6E-31 T 17-10-2018 IPR004624 PhnA protein BJD13_09780 55bca2ee48a828fbaa24a244cd62295a 111 Gene3D G3DSA:2.20.25.10 1 40 2.0E-15 T 17-10-2018 BJD13_09780 55bca2ee48a828fbaa24a244cd62295a 111 Pfam PF08274 PhnA Zinc-Ribbon 4 32 7.6E-10 T 17-10-2018 IPR013987 PhnA protein, N-terminal BJD13_09780 55bca2ee48a828fbaa24a244cd62295a 111 SUPERFAMILY SSF82057 40 111 2.79E-24 T 17-10-2018 BJD13_09780 55bca2ee48a828fbaa24a244cd62295a 111 Pfam PF03831 PhnA domain 43 111 2.6E-30 T 17-10-2018 IPR013988 PhnA protein, C-terminal BJD13_03905 a2d2878c3b2596c5242fafd578eab989 459 SUPERFAMILY SSF49363 45 144 3.14E-10 T 17-10-2018 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 BJD13_03905 a2d2878c3b2596c5242fafd578eab989 459 SUPERFAMILY SSF56300 150 423 3.47E-46 T 17-10-2018 BJD13_03905 a2d2878c3b2596c5242fafd578eab989 459 Pfam PF16656 Purple acid Phosphatase, N-terminal domain 48 143 7.3E-14 T 17-10-2018 IPR015914 Purple acid phosphatase, N-terminal GO:0003993|GO:0046872 BJD13_03905 a2d2878c3b2596c5242fafd578eab989 459 Gene3D G3DSA:3.60.21.10 146 410 5.1E-36 T 17-10-2018 IPR029052 Metallo-dependent phosphatase-like BJD13_03905 a2d2878c3b2596c5242fafd578eab989 459 Pfam PF00149 Calcineurin-like phosphoesterase 152 350 1.8E-14 T 17-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 BJD13_01960 eeed516727e5d546eb436928f54fa157 254 Gene3D G3DSA:3.40.50.300 1 248 4.2E-60 T 17-10-2018 BJD13_01960 eeed516727e5d546eb436928f54fa157 254 SMART SM00382 26 230 2.9E-5 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_01960 eeed516727e5d546eb436928f54fa157 254 Pfam PF00005 ABC transporter 17 172 2.2E-21 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD13_01960 eeed516727e5d546eb436928f54fa157 254 SUPERFAMILY SSF52540 2 243 1.18E-41 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_01960 eeed516727e5d546eb436928f54fa157 254 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 2 242 1.6E-109 T 17-10-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524 BJD13_17145 6f9d69d85dcf3044a335d4cebc43610d 159 Pfam PF14534 Domain of unknown function (DUF4440) 41 140 2.5E-12 T 17-10-2018 IPR027843 Domain of unknown function DUF4440 BJD13_17145 6f9d69d85dcf3044a335d4cebc43610d 159 Gene3D G3DSA:3.10.450.50 25 147 1.3E-18 T 17-10-2018 BJD13_17145 6f9d69d85dcf3044a335d4cebc43610d 159 SUPERFAMILY SSF54427 37 145 5.85E-15 T 17-10-2018 IPR032710 NTF2-like domain superfamily BJD13_00020 6b2a90fe7c1e46b12e0d69c623a45318 374 Gene3D G3DSA:3.10.150.10 1 248 1.5E-41 T 17-10-2018 BJD13_00020 6b2a90fe7c1e46b12e0d69c623a45318 374 Pfam PF02767 DNA polymerase III beta subunit, central domain 161 233 2.2E-5 T 17-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 BJD13_00020 6b2a90fe7c1e46b12e0d69c623a45318 374 SUPERFAMILY SSF55979 159 217 1.19E-6 T 17-10-2018 BJD13_00020 6b2a90fe7c1e46b12e0d69c623a45318 374 SMART SM00480 21 371 5.5E-8 T 17-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 BJD13_00020 6b2a90fe7c1e46b12e0d69c623a45318 374 SUPERFAMILY SSF55979 1 109 3.14E-7 T 17-10-2018 BJD13_00020 6b2a90fe7c1e46b12e0d69c623a45318 374 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 110 6.6E-8 T 17-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 BJD13_00020 6b2a90fe7c1e46b12e0d69c623a45318 374 SUPERFAMILY SSF55979 252 374 1.28E-10 T 17-10-2018 BJD13_00020 6b2a90fe7c1e46b12e0d69c623a45318 374 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 257 371 3.1E-7 T 17-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 BJD13_00020 6b2a90fe7c1e46b12e0d69c623a45318 374 Gene3D G3DSA:3.70.10.10 142 372 1.5E-41 T 17-10-2018 BJD13_11680 e76b43af7a7a9ce7ae1e3835a2af3378 365 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 41 361 8.3E-147 T 17-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 BJD13_11680 e76b43af7a7a9ce7ae1e3835a2af3378 365 Gene3D G3DSA:3.40.190.10 148 360 1.1E-127 T 17-10-2018 BJD13_11680 e76b43af7a7a9ce7ae1e3835a2af3378 365 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 179 187 - T 17-10-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 BJD13_11680 e76b43af7a7a9ce7ae1e3835a2af3378 365 SUPERFAMILY SSF53850 56 361 4.18E-83 T 17-10-2018 BJD13_11680 e76b43af7a7a9ce7ae1e3835a2af3378 365 Pfam PF13531 Bacterial extracellular solute-binding protein 73 314 7.1E-41 T 17-10-2018 BJD13_11680 e76b43af7a7a9ce7ae1e3835a2af3378 365 Gene3D G3DSA:3.40.190.10 59 330 1.1E-127 T 17-10-2018 BJD13_03945 1122f5958fb196812b11d306eb2dfa7f 614 Gene3D G3DSA:3.30.1360.200 276 430 4.2E-46 T 17-10-2018 BJD13_03945 1122f5958fb196812b11d306eb2dfa7f 614 Gene3D G3DSA:3.30.70.260 26 105 1.3E-6 T 17-10-2018 BJD13_03945 1122f5958fb196812b11d306eb2dfa7f 614 Pfam PF13721 SecD export protein N-terminal TM region 2 102 4.8E-32 T 17-10-2018 IPR027398 SecD export protein N-terminal TM domain BJD13_03945 1122f5958fb196812b11d306eb2dfa7f 614 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 122 598 7.8E-123 T 17-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 BJD13_03945 1122f5958fb196812b11d306eb2dfa7f 614 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 344 592 3.3E-63 T 17-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BJD13_03945 1122f5958fb196812b11d306eb2dfa7f 614 Gene3D G3DSA:3.30.70.3400 214 434 4.2E-46 T 17-10-2018 BJD13_03945 1122f5958fb196812b11d306eb2dfa7f 614 SUPERFAMILY SSF82866 409 606 1.7E-38 T 17-10-2018 BJD13_03945 1122f5958fb196812b11d306eb2dfa7f 614 Pfam PF07549 SecD/SecF GG Motif 115 140 5.4E-6 T 17-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site BJD13_03945 1122f5958fb196812b11d306eb2dfa7f 614 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 2 613 44.988 T 17-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 BJD13_03945 1122f5958fb196812b11d306eb2dfa7f 614 Pfam PF02355 Protein export membrane protein 434 602 7.9E-21 T 17-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial BJD13_03945 1122f5958fb196812b11d306eb2dfa7f 614 Gene3D G3DSA:1.20.1640.10 435 612 5.5E-12 T 17-10-2018 BJD13_07510 26c780e967e80768714033eba8f687c6 246 Gene3D G3DSA:3.40.570.10 11 234 6.5E-38 T 17-10-2018 BJD13_07510 26c780e967e80768714033eba8f687c6 246 SMART SM00477 28 226 5.6E-9 T 17-10-2018 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 BJD13_07510 26c780e967e80768714033eba8f687c6 246 Pfam PF01223 DNA/RNA non-specific endonuclease 19 216 1.6E-36 T 17-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 BJD13_07510 26c780e967e80768714033eba8f687c6 246 SMART SM00892 27 231 5.0E-33 T 17-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 BJD13_07510 26c780e967e80768714033eba8f687c6 246 SUPERFAMILY SSF54060 21 217 1.65E-40 T 17-10-2018 BJD13_02505 1c257c5d35cb565a8a4aba0b305d4b17 408 Gene3D G3DSA:3.90.226.10 117 272 2.2E-10 T 17-10-2018 BJD13_02505 1c257c5d35cb565a8a4aba0b305d4b17 408 SUPERFAMILY SSF52096 116 270 7.56E-11 T 17-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BJD13_07045 c99cd3f7356eada4cb4fdcd1b5aed916 238 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 144 161 - T 17-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BJD13_07045 c99cd3f7356eada4cb4fdcd1b5aed916 238 Gene3D G3DSA:3.30.360.10 122 207 6.6E-65 T 17-10-2018 BJD13_07045 c99cd3f7356eada4cb4fdcd1b5aed916 238 Gene3D G3DSA:3.40.50.720 7 235 6.6E-65 T 17-10-2018 BJD13_07045 c99cd3f7356eada4cb4fdcd1b5aed916 238 SUPERFAMILY SSF55347 122 209 1.05E-22 T 17-10-2018 BJD13_07045 c99cd3f7356eada4cb4fdcd1b5aed916 238 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 6 167 1.1E-40 T 17-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BJD13_07045 c99cd3f7356eada4cb4fdcd1b5aed916 238 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 6 120 8.2E-25 T 17-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BJD13_07045 c99cd3f7356eada4cb4fdcd1b5aed916 238 PIRSF PIRSF000161 4 238 2.1E-71 T 17-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BJD13_07045 c99cd3f7356eada4cb4fdcd1b5aed916 238 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 6 238 28.826 T 17-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BJD13_07045 c99cd3f7356eada4cb4fdcd1b5aed916 238 SUPERFAMILY SSF51735 5 237 3.07E-33 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_07045 c99cd3f7356eada4cb4fdcd1b5aed916 238 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 123 236 1.9E-31 T 17-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BJD13_13390 d97fd8dfc013afab22de02dafc10c658 382 SUPERFAMILY SSF53955 73 376 9.56E-84 T 17-10-2018 IPR023346 Lysozyme-like domain superfamily BJD13_13390 d97fd8dfc013afab22de02dafc10c658 382 Pfam PF13406 Transglycosylase SLT domain 71 372 9.4E-92 T 17-10-2018 IPR031304 Transglycosylase SLT domain 2 BJD13_13390 d97fd8dfc013afab22de02dafc10c658 382 Gene3D G3DSA:1.10.530.10 110 371 6.2E-102 T 17-10-2018 BJD13_13390 d97fd8dfc013afab22de02dafc10c658 382 Gene3D G3DSA:1.10.8.350 77 256 6.2E-102 T 17-10-2018 BJD13_13390 d97fd8dfc013afab22de02dafc10c658 382 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 73 374 3.3E-125 T 17-10-2018 IPR011757 Lytic transglycosylase MltB BJD13_16435 cef4449337152da7574e5c654cdeb8aa 319 PIRSF PIRSF006493 1 313 3.8E-84 T 17-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type BJD13_16435 cef4449337152da7574e5c654cdeb8aa 319 TIGRFAM TIGR02772 Ku_bact: Ku protein 2 265 4.0E-99 T 17-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type BJD13_16435 cef4449337152da7574e5c654cdeb8aa 319 SUPERFAMILY SSF100939 2 265 9.02E-44 T 17-10-2018 IPR016194 SPOC-like, C-terminal domain superfamily BJD13_16435 cef4449337152da7574e5c654cdeb8aa 319 Hamap MF_01875 Non-homologous end joining protein Ku [ku]. 2 263 30.225 T 17-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type BJD13_16435 cef4449337152da7574e5c654cdeb8aa 319 Gene3D G3DSA:2.40.290.10 4 177 7.8E-15 T 17-10-2018 IPR016194 SPOC-like, C-terminal domain superfamily BJD13_16435 cef4449337152da7574e5c654cdeb8aa 319 Pfam PF02735 Ku70/Ku80 beta-barrel domain 12 178 7.8E-29 T 17-10-2018 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571|Reactome: R-HSA-6798695 BJD13_16435 cef4449337152da7574e5c654cdeb8aa 319 SMART SM00559 53 182 1.9E-20 T 17-10-2018 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571|Reactome: R-HSA-6798695 BJD13_07970 b8f906f0795c02f580b5ca6c0e03f675 225 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 18 222 5.8E-60 T 17-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 BJD13_07970 b8f906f0795c02f580b5ca6c0e03f675 225 Gene3D G3DSA:3.40.50.150 13 224 5.3E-73 T 17-10-2018 BJD13_07970 b8f906f0795c02f580b5ca6c0e03f675 225 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 145 160 - T 17-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 BJD13_07970 b8f906f0795c02f580b5ca6c0e03f675 225 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 23 221 2.6E-55 T 17-10-2018 BJD13_07970 b8f906f0795c02f580b5ca6c0e03f675 225 SUPERFAMILY SSF53335 19 222 1.53E-43 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_07970 b8f906f0795c02f580b5ca6c0e03f675 225 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 17 225 34.893 T 17-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 BJD13_08490 515202015c153189b4dc3212998a73e1 143 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 2 95 21.161 T 17-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 BJD13_08490 515202015c153189b4dc3212998a73e1 143 Gene3D G3DSA:3.30.70.60 2 93 2.4E-29 T 17-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 BJD13_08490 515202015c153189b4dc3212998a73e1 143 Pfam PF01250 Ribosomal protein S6 4 92 5.1E-26 T 17-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_08490 515202015c153189b4dc3212998a73e1 143 SUPERFAMILY SSF54995 1 104 1.44E-34 T 17-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_08490 515202015c153189b4dc3212998a73e1 143 TIGRFAM TIGR00166 S6: ribosomal protein bS6 3 94 9.7E-32 T 17-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_21895 180146f61f6bd9d28bf7ba2ddfecb5e9 333 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 173 316 1.4E-61 T 17-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 BJD13_21895 180146f61f6bd9d28bf7ba2ddfecb5e9 333 Gene3D G3DSA:3.40.50.720 3 171 1.5E-68 T 17-10-2018 BJD13_21895 180146f61f6bd9d28bf7ba2ddfecb5e9 333 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 1 318 41.602 T 17-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 BJD13_21895 180146f61f6bd9d28bf7ba2ddfecb5e9 333 SUPERFAMILY SSF48179 173 320 9.86E-67 T 17-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BJD13_21895 180146f61f6bd9d28bf7ba2ddfecb5e9 333 SUPERFAMILY SSF51735 7 172 2.18E-63 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_21895 180146f61f6bd9d28bf7ba2ddfecb5e9 333 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 8 166 5.8E-70 T 17-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 BJD13_21895 180146f61f6bd9d28bf7ba2ddfecb5e9 333 Gene3D G3DSA:1.10.3730.40 172 325 4.9E-68 T 17-10-2018 BJD13_21895 180146f61f6bd9d28bf7ba2ddfecb5e9 333 PIRSF PIRSF000116 192 321 6.7E-13 T 17-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 BJD13_21895 180146f61f6bd9d28bf7ba2ddfecb5e9 333 PIRSF PIRSF000116 3 197 3.1E-40 T 17-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 BJD13_21895 180146f61f6bd9d28bf7ba2ddfecb5e9 333 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 8 316 5.9E-126 T 17-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 BJD13_04675 3da30f5f2546189a4896c5bf2e81233b 432 PRINTS PR00149 Fumarate lyase superfamily signature 279 295 4.8E-13 T 17-10-2018 IPR000362 Fumarate lyase family BJD13_04675 3da30f5f2546189a4896c5bf2e81233b 432 PRINTS PR00149 Fumarate lyase superfamily signature 105 123 4.8E-13 T 17-10-2018 IPR000362 Fumarate lyase family BJD13_04675 3da30f5f2546189a4896c5bf2e81233b 432 PRINTS PR00149 Fumarate lyase superfamily signature 150 168 4.8E-13 T 17-10-2018 IPR000362 Fumarate lyase family BJD13_04675 3da30f5f2546189a4896c5bf2e81233b 432 Pfam PF00206 Lyase 34 302 5.8E-44 T 17-10-2018 IPR022761 Fumarate lyase, N-terminal BJD13_04675 3da30f5f2546189a4896c5bf2e81233b 432 Gene3D G3DSA:1.10.40.30 363 398 4.4E-100 T 17-10-2018 BJD13_04675 3da30f5f2546189a4896c5bf2e81233b 432 PRINTS PR00145 Argininosuccinate lyase family signature 104 126 3.4E-30 T 17-10-2018 BJD13_04675 3da30f5f2546189a4896c5bf2e81233b 432 PRINTS PR00145 Argininosuccinate lyase family signature 196 212 3.4E-30 T 17-10-2018 BJD13_04675 3da30f5f2546189a4896c5bf2e81233b 432 PRINTS PR00145 Argininosuccinate lyase family signature 145 165 3.4E-30 T 17-10-2018 BJD13_04675 3da30f5f2546189a4896c5bf2e81233b 432 PRINTS PR00145 Argininosuccinate lyase family signature 313 332 3.4E-30 T 17-10-2018 BJD13_04675 3da30f5f2546189a4896c5bf2e81233b 432 PRINTS PR00145 Argininosuccinate lyase family signature 279 295 3.4E-30 T 17-10-2018 BJD13_04675 3da30f5f2546189a4896c5bf2e81233b 432 Hamap MF_00006 Argininosuccinate lyase [argH]. 4 429 29.32 T 17-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BJD13_04675 3da30f5f2546189a4896c5bf2e81233b 432 ProSitePatterns PS00163 Fumarate lyases signature. 279 288 - T 17-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 BJD13_04675 3da30f5f2546189a4896c5bf2e81233b 432 Gene3D G3DSA:1.10.275.10 34 232 4.4E-100 T 17-10-2018 IPR024083 Fumarase/histidase, N-terminal BJD13_04675 3da30f5f2546189a4896c5bf2e81233b 432 SUPERFAMILY SSF48557 25 402 1.73E-84 T 17-10-2018 IPR008948 L-Aspartase-like GO:0003824 BJD13_04675 3da30f5f2546189a4896c5bf2e81233b 432 Gene3D G3DSA:1.20.200.10 122 362 4.4E-100 T 17-10-2018 BJD13_18390 b6b5e9284a0b5524a92c895e2f179a81 358 Pfam PF16344 Domain of unknown function (DUF4974) 251 323 6.4E-7 T 17-10-2018 IPR032508 Protein FecR, C-terminal BJD13_18390 b6b5e9284a0b5524a92c895e2f179a81 358 Gene3D G3DSA:2.60.120.1440 135 274 1.5E-17 T 17-10-2018 BJD13_18390 b6b5e9284a0b5524a92c895e2f179a81 358 Pfam PF16220 Domain of unknown function (DUF4880) 15 56 1.0E-7 T 17-10-2018 IPR032623 FecR, N-terminal BJD13_18390 b6b5e9284a0b5524a92c895e2f179a81 358 Pfam PF04773 FecR protein 142 232 1.9E-15 T 17-10-2018 IPR006860 FecR protein BJD13_18390 b6b5e9284a0b5524a92c895e2f179a81 358 PIRSF PIRSF018266 5 350 2.0E-67 T 17-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component BJD13_16140 a2fe328c96885d814dc5b9d76e3673a8 328 SUPERFAMILY SSF53335 23 320 5.56E-10 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_16140 a2fe328c96885d814dc5b9d76e3673a8 328 PIRSF PIRSF018005 2 328 1.4E-137 T 17-10-2018 IPR017804 Methyltransferase EgtD-like GO:0008168 BJD13_16140 a2fe328c96885d814dc5b9d76e3673a8 328 TIGRFAM TIGR03438 egtD_ergothio: dimethylhistidine N-methyltransferase 25 324 6.4E-118 T 17-10-2018 IPR035094 Histidine N-alpha-methyltransferase KEGG: 00340+2.1.1.44|MetaCyc: PWY-7255|MetaCyc: PWY-7550 BJD13_16140 a2fe328c96885d814dc5b9d76e3673a8 328 Gene3D G3DSA:3.40.50.150 52 231 4.0E-45 T 17-10-2018 BJD13_16140 a2fe328c96885d814dc5b9d76e3673a8 328 Pfam PF10017 Histidine-specific methyltransferase, SAM-dependent 26 326 7.8E-100 T 17-10-2018 IPR019257 Histidine-specific methyltransferase, SAM-dependent BJD13_04875 2a48f963dee9cd49eadc0a9a8763538b 297 SUPERFAMILY SSF56219 41 285 3.4E-40 T 17-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BJD13_04875 2a48f963dee9cd49eadc0a9a8763538b 297 Gene3D G3DSA:3.60.10.10 39 290 6.7E-49 T 17-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BJD13_04875 2a48f963dee9cd49eadc0a9a8763538b 297 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 46 277 4.3E-19 T 17-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase BJD13_04475 c821fc5c8186a10662d9be269b39a707 629 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD13_04475 c821fc5c8186a10662d9be269b39a707 629 Pfam PF16326 ABC transporter C-terminal domain 560 628 1.4E-20 T 17-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 BJD13_04475 c821fc5c8186a10662d9be269b39a707 629 SUPERFAMILY SSF52540 309 511 1.05E-46 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_04475 c821fc5c8186a10662d9be269b39a707 629 Pfam PF12848 ABC transporter 219 293 1.2E-9 T 17-10-2018 IPR032781 ABC-transporter extension domain BJD13_04475 c821fc5c8186a10662d9be269b39a707 629 Gene3D G3DSA:3.40.50.300 4 274 1.0E-65 T 17-10-2018 BJD13_04475 c821fc5c8186a10662d9be269b39a707 629 Pfam PF00005 ABC transporter 20 180 1.6E-26 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD13_04475 c821fc5c8186a10662d9be269b39a707 629 SUPERFAMILY SSF52540 3 230 3.33E-50 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_04475 c821fc5c8186a10662d9be269b39a707 629 Gene3D G3DSA:1.10.287.380 553 629 8.7E-24 T 17-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 BJD13_04475 c821fc5c8186a10662d9be269b39a707 629 Pfam PF00005 ABC transporter 331 464 4.5E-23 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD13_04475 c821fc5c8186a10662d9be269b39a707 629 Gene3D G3DSA:3.40.50.300 276 542 5.3E-67 T 17-10-2018 BJD13_04475 c821fc5c8186a10662d9be269b39a707 629 ProSitePatterns PS00211 ABC transporters family signature. 436 450 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD13_04475 c821fc5c8186a10662d9be269b39a707 629 SMART SM00382 339 510 2.1E-15 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_04475 c821fc5c8186a10662d9be269b39a707 629 SMART SM00382 28 225 9.8E-19 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_19290 9925b052fd0102c61a98c09bada2fe72 506 Pfam PF01078 Magnesium chelatase, subunit ChlI 190 394 1.3E-96 T 17-10-2018 IPR000523 Magnesium chelatase ChlI domain BJD13_19290 9925b052fd0102c61a98c09bada2fe72 506 Gene3D G3DSA:3.40.50.300 182 496 9.0E-57 T 17-10-2018 BJD13_19290 9925b052fd0102c61a98c09bada2fe72 506 SMART SM00382 210 392 1.9E-6 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_19290 9925b052fd0102c61a98c09bada2fe72 506 SUPERFAMILY SSF54211 9 169 9.48E-32 T 17-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BJD13_19290 9925b052fd0102c61a98c09bada2fe72 506 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 1.5E-45 T 17-10-2018 BJD13_19290 9925b052fd0102c61a98c09bada2fe72 506 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 402 494 3.8E-30 T 17-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain BJD13_19290 9925b052fd0102c61a98c09bada2fe72 506 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 494 1.3E-193 T 17-10-2018 IPR004482 Mg chelatase-related protein BJD13_19290 9925b052fd0102c61a98c09bada2fe72 506 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 317 330 1.7E-6 T 17-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 BJD13_19290 9925b052fd0102c61a98c09bada2fe72 506 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 289 303 1.7E-6 T 17-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 BJD13_19290 9925b052fd0102c61a98c09bada2fe72 506 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 209 224 1.7E-6 T 17-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 BJD13_19290 9925b052fd0102c61a98c09bada2fe72 506 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 341 353 1.7E-6 T 17-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 BJD13_19290 9925b052fd0102c61a98c09bada2fe72 506 SUPERFAMILY SSF52540 190 498 1.74E-45 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_19290 9925b052fd0102c61a98c09bada2fe72 506 Gene3D G3DSA:3.30.230.10 18 168 1.7E-6 T 17-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BJD13_17125 ca9b70698c2aa93505e4640501d69fcd 335 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 148 169 - T 17-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 BJD13_17125 ca9b70698c2aa93505e4640501d69fcd 335 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 2 335 3.3E-162 T 17-10-2018 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 BJD13_17125 ca9b70698c2aa93505e4640501d69fcd 335 SMART SM00829 10 332 1.0E-9 T 17-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 BJD13_17125 ca9b70698c2aa93505e4640501d69fcd 335 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 89 7.9E-6 T 17-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 BJD13_17125 ca9b70698c2aa93505e4640501d69fcd 335 SUPERFAMILY SSF51735 116 286 1.36E-34 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_17125 ca9b70698c2aa93505e4640501d69fcd 335 Gene3D G3DSA:3.90.180.10 23 332 3.0E-100 T 17-10-2018 BJD13_17125 ca9b70698c2aa93505e4640501d69fcd 335 SUPERFAMILY SSF50129 1 142 1.31E-32 T 17-10-2018 IPR011032 GroES-like superfamily BJD13_17125 ca9b70698c2aa93505e4640501d69fcd 335 Gene3D G3DSA:3.40.50.720 127 271 3.0E-100 T 17-10-2018 BJD13_17125 ca9b70698c2aa93505e4640501d69fcd 335 Pfam PF13602 Zinc-binding dehydrogenase 192 332 1.5E-23 T 17-10-2018 BJD13_05075 b429b7fc0ed9f503edc2d098226e93aa 140 Pfam PF12833 Helix-turn-helix domain 31 109 1.8E-24 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD13_05075 b429b7fc0ed9f503edc2d098226e93aa 140 SMART SM00342 25 108 1.1E-27 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD13_05075 b429b7fc0ed9f503edc2d098226e93aa 140 Gene3D G3DSA:1.10.10.60 59 114 1.2E-16 T 17-10-2018 BJD13_05075 b429b7fc0ed9f503edc2d098226e93aa 140 SUPERFAMILY SSF46689 9 59 4.29E-13 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_05075 b429b7fc0ed9f503edc2d098226e93aa 140 SUPERFAMILY SSF46689 61 110 1.58E-11 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_05075 b429b7fc0ed9f503edc2d098226e93aa 140 Gene3D G3DSA:1.10.10.60 2 58 3.0E-15 T 17-10-2018 BJD13_05475 8afefafd489ec6a4c8c05d907fee4274 344 SUPERFAMILY SSF56349 64 335 3.53E-60 T 17-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BJD13_05475 8afefafd489ec6a4c8c05d907fee4274 344 Gene3D G3DSA:1.10.443.10 174 341 1.3E-39 T 17-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 BJD13_05475 8afefafd489ec6a4c8c05d907fee4274 344 Pfam PF00589 Phage integrase family 176 329 1.3E-25 T 17-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 BJD13_05475 8afefafd489ec6a4c8c05d907fee4274 344 Gene3D G3DSA:1.10.150.130 59 173 1.5E-10 T 17-10-2018 IPR010998 Integrase/recombinase, N-terminal BJD13_03465 d90a17aaec061e129f22e342f9532e2d 538 Gene3D G3DSA:3.20.20.80 6 455 3.7E-177 T 17-10-2018 BJD13_03465 d90a17aaec061e129f22e342f9532e2d 538 Pfam PF00128 Alpha amylase, catalytic domain 29 374 9.0E-90 T 17-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BJD13_03465 d90a17aaec061e129f22e342f9532e2d 538 SUPERFAMILY SSF51445 5 460 7.05E-135 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily BJD13_03465 d90a17aaec061e129f22e342f9532e2d 538 Gene3D G3DSA:3.90.400.10 106 176 3.7E-177 T 17-10-2018 BJD13_03465 d90a17aaec061e129f22e342f9532e2d 538 SMART SM00642 14 402 5.0E-120 T 17-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BJD13_17020 40b2d53234889f555bedadfacce5421b 285 SMART SM00014 124 238 1.8E-16 T 17-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BJD13_17020 40b2d53234889f555bedadfacce5421b 285 SUPERFAMILY SSF48317 44 257 5.36E-48 T 17-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily BJD13_17020 40b2d53234889f555bedadfacce5421b 285 Pfam PF01569 PAP2 superfamily 136 240 2.3E-17 T 17-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BJD13_17020 40b2d53234889f555bedadfacce5421b 285 PIRSF PIRSF000897 9 276 5.6E-118 T 17-10-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00730+3.1.3.2|KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 BJD13_17020 40b2d53234889f555bedadfacce5421b 285 PRINTS PR00483 Bacterial acid phosphatase class A signature 201 225 3.4E-38 T 17-10-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00730+3.1.3.2|KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 BJD13_17020 40b2d53234889f555bedadfacce5421b 285 PRINTS PR00483 Bacterial acid phosphatase class A signature 143 161 3.4E-38 T 17-10-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00730+3.1.3.2|KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 BJD13_17020 40b2d53234889f555bedadfacce5421b 285 PRINTS PR00483 Bacterial acid phosphatase class A signature 79 98 3.4E-38 T 17-10-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00730+3.1.3.2|KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 BJD13_17020 40b2d53234889f555bedadfacce5421b 285 PRINTS PR00483 Bacterial acid phosphatase class A signature 169 195 3.4E-38 T 17-10-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00730+3.1.3.2|KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 BJD13_17020 40b2d53234889f555bedadfacce5421b 285 PRINTS PR00483 Bacterial acid phosphatase class A signature 235 253 3.4E-38 T 17-10-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00730+3.1.3.2|KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 BJD13_17020 40b2d53234889f555bedadfacce5421b 285 Gene3D G3DSA:1.20.144.10 32 260 3.0E-76 T 17-10-2018 BJD13_17020 40b2d53234889f555bedadfacce5421b 285 ProSitePatterns PS01157 Class A bacterial acid phosphatases signature. 173 180 - T 17-10-2018 IPR018296 Acid phosphatase, class A, bacterial, conserved site GO:0003993|GO:0030288 KEGG: 00730+3.1.3.2|KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 BJD13_22950 b3eb7ff90c55252668a757d3a085c2c4 398 SUPERFAMILY SSF51419 31 283 1.57E-62 T 17-10-2018 IPR029066 PLP-binding barrel BJD13_22950 b3eb7ff90c55252668a757d3a085c2c4 398 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 28 372 2.3E-14 T 17-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 BJD13_22950 b3eb7ff90c55252668a757d3a085c2c4 398 SUPERFAMILY SSF50621 265 396 9.84E-37 T 17-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 BJD13_22950 b3eb7ff90c55252668a757d3a085c2c4 398 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 186 199 2.1E-10 T 17-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BJD13_22950 b3eb7ff90c55252668a757d3a085c2c4 398 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 270 289 2.1E-10 T 17-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BJD13_22950 b3eb7ff90c55252668a757d3a085c2c4 398 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 74 86 2.1E-10 T 17-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BJD13_22950 b3eb7ff90c55252668a757d3a085c2c4 398 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 54 72 2.1E-10 T 17-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BJD13_22950 b3eb7ff90c55252668a757d3a085c2c4 398 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 35 280 5.2E-27 T 17-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 BJD13_22950 b3eb7ff90c55252668a757d3a085c2c4 398 Gene3D G3DSA:2.40.37.10 263 398 2.3E-42 T 17-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 BJD13_22950 b3eb7ff90c55252668a757d3a085c2c4 398 Gene3D G3DSA:3.20.20.10 36 256 8.3E-42 T 17-10-2018 IPR029066 PLP-binding barrel BJD13_11790 85c68922903106e3ae92245e4263be18 172 Pfam PF02600 Disulfide bond formation protein DsbB 9 160 1.6E-41 T 17-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 BJD13_11790 85c68922903106e3ae92245e4263be18 172 SUPERFAMILY SSF158442 12 161 4.84E-42 T 17-10-2018 IPR023380 DsbB-like superfamily BJD13_11790 85c68922903106e3ae92245e4263be18 172 Gene3D G3DSA:1.20.1550.10 6 171 2.9E-50 T 17-10-2018 IPR023380 DsbB-like superfamily BJD13_11790 85c68922903106e3ae92245e4263be18 172 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 4 168 23.153 T 17-10-2018 IPR022920 Disulphide bond formation protein DsbB BJD13_17290 f541f670a7dc73394bdf823e77a60035 158 Pfam PF07080 Protein of unknown function (DUF1348) 11 140 3.6E-64 T 17-10-2018 IPR009783 Protein of unknown function DUF1348 BJD13_17290 f541f670a7dc73394bdf823e77a60035 158 SUPERFAMILY SSF54427 6 158 1.63E-78 T 17-10-2018 IPR032710 NTF2-like domain superfamily BJD13_17290 f541f670a7dc73394bdf823e77a60035 158 Gene3D G3DSA:3.10.450.50 14 158 2.8E-77 T 17-10-2018 BJD13_22170 55caa5766fd00a9c58149b5569f79ca3 241 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 5 239 8.8E-115 T 17-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 BJD13_22170 55caa5766fd00a9c58149b5569f79ca3 241 SUPERFAMILY SSF55666 156 239 1.09E-24 T 17-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BJD13_22170 55caa5766fd00a9c58149b5569f79ca3 241 Pfam PF03725 3' exoribonuclease family, domain 2 161 227 1.9E-9 T 17-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BJD13_22170 55caa5766fd00a9c58149b5569f79ca3 241 ProSitePatterns PS01277 Ribonuclease PH signature. 119 132 - T 17-10-2018 IPR018336 Ribonuclease PH, conserved site BJD13_22170 55caa5766fd00a9c58149b5569f79ca3 241 Gene3D G3DSA:3.30.230.70 13 240 7.0E-62 T 17-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BJD13_22170 55caa5766fd00a9c58149b5569f79ca3 241 SUPERFAMILY SSF54211 5 184 2.68E-45 T 17-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BJD13_22170 55caa5766fd00a9c58149b5569f79ca3 241 Hamap MF_00564 Ribonuclease PH [rph]. 14 240 45.531 T 17-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 BJD13_22170 55caa5766fd00a9c58149b5569f79ca3 241 Pfam PF01138 3' exoribonuclease family, domain 1 13 143 4.7E-22 T 17-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BJD13_18500 52de1caf7c90b719a70072a6ad238e22 933 Gene3D G3DSA:3.40.50.1010 4 272 2.4E-89 T 17-10-2018 BJD13_18500 52de1caf7c90b719a70072a6ad238e22 933 SUPERFAMILY SSF47807 166 280 1.26E-31 T 17-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily BJD13_18500 52de1caf7c90b719a70072a6ad238e22 933 SUPERFAMILY SSF56672 527 933 3.45E-153 T 17-10-2018 BJD13_18500 52de1caf7c90b719a70072a6ad238e22 933 Pfam PF00476 DNA polymerase family A 556 930 3.5E-146 T 17-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD13_18500 52de1caf7c90b719a70072a6ad238e22 933 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 166 260 1.5E-27 T 17-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 BJD13_18500 52de1caf7c90b719a70072a6ad238e22 933 SMART SM00475 2 256 2.4E-109 T 17-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 BJD13_18500 52de1caf7c90b719a70072a6ad238e22 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 735 748 3.0E-79 T 17-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD13_18500 52de1caf7c90b719a70072a6ad238e22 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 796 807 3.0E-79 T 17-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD13_18500 52de1caf7c90b719a70072a6ad238e22 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 818 829 3.0E-79 T 17-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD13_18500 52de1caf7c90b719a70072a6ad238e22 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 683 698 3.0E-79 T 17-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD13_18500 52de1caf7c90b719a70072a6ad238e22 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 759 784 3.0E-79 T 17-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD13_18500 52de1caf7c90b719a70072a6ad238e22 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 880 893 3.0E-79 T 17-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD13_18500 52de1caf7c90b719a70072a6ad238e22 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 660 682 3.0E-79 T 17-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD13_18500 52de1caf7c90b719a70072a6ad238e22 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 705 728 3.0E-79 T 17-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD13_18500 52de1caf7c90b719a70072a6ad238e22 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 850 866 3.0E-79 T 17-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD13_18500 52de1caf7c90b719a70072a6ad238e22 933 Gene3D G3DSA:3.30.70.370 669 929 1.2E-106 T 17-10-2018 BJD13_18500 52de1caf7c90b719a70072a6ad238e22 933 SUPERFAMILY SSF53098 332 522 2.85E-51 T 17-10-2018 IPR012337 Ribonuclease H-like superfamily BJD13_18500 52de1caf7c90b719a70072a6ad238e22 933 SUPERFAMILY SSF88723 1 165 5.05E-51 T 17-10-2018 IPR029060 PIN-like domain superfamily BJD13_18500 52de1caf7c90b719a70072a6ad238e22 933 Gene3D G3DSA:3.30.420.10 333 546 2.5E-67 T 17-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BJD13_18500 52de1caf7c90b719a70072a6ad238e22 933 Pfam PF01612 3'-5' exonuclease 335 521 1.1E-35 T 17-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 BJD13_18500 52de1caf7c90b719a70072a6ad238e22 933 ProSitePatterns PS00447 DNA polymerase family A signature. 759 778 - T 17-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD13_18500 52de1caf7c90b719a70072a6ad238e22 933 SMART SM00482 691 897 2.4E-106 T 17-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD13_18500 52de1caf7c90b719a70072a6ad238e22 933 Gene3D G3DSA:1.10.150.20 714 857 1.2E-106 T 17-10-2018 BJD13_18500 52de1caf7c90b719a70072a6ad238e22 933 SMART SM00474 335 522 1.4E-31 T 17-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 BJD13_18500 52de1caf7c90b719a70072a6ad238e22 933 SMART SM00279 168 203 3.9E-14 T 17-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 BJD13_18500 52de1caf7c90b719a70072a6ad238e22 933 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 3 165 1.4E-47 T 17-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 BJD13_18500 52de1caf7c90b719a70072a6ad238e22 933 Gene3D G3DSA:1.10.150.20 169 241 2.4E-89 T 17-10-2018 BJD13_18500 52de1caf7c90b719a70072a6ad238e22 933 Gene3D G3DSA:1.20.1060.10 548 663 3.1E-40 T 17-10-2018 BJD13_18500 52de1caf7c90b719a70072a6ad238e22 933 TIGRFAM TIGR00593 pola: DNA polymerase I 4 933 1.7E-268 T 17-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD13_21400 aaafbe578eb0e3c4149a1f53d0a60a5a 1348 Gene3D G3DSA:3.40.50.880 1039 1348 2.8E-123 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD13_21400 aaafbe578eb0e3c4149a1f53d0a60a5a 1348 SUPERFAMILY SSF109736 158 212 4.45E-18 T 17-10-2018 BJD13_21400 aaafbe578eb0e3c4149a1f53d0a60a5a 1348 SUPERFAMILY SSF55326 213 415 2.55E-51 T 17-10-2018 IPR036921 PurM-like, N-terminal domain superfamily BJD13_21400 aaafbe578eb0e3c4149a1f53d0a60a5a 1348 SUPERFAMILY SSF52317 1093 1347 1.23E-91 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD13_21400 aaafbe578eb0e3c4149a1f53d0a60a5a 1348 Gene3D G3DSA:3.30.1330.10 206 411 4.6E-40 T 17-10-2018 IPR036921 PurM-like, N-terminal domain superfamily BJD13_21400 aaafbe578eb0e3c4149a1f53d0a60a5a 1348 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1096 1347 1.7E-98 T 17-10-2018 BJD13_21400 aaafbe578eb0e3c4149a1f53d0a60a5a 1348 SUPERFAMILY SSF82697 1 148 1.15E-32 T 17-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BJD13_21400 aaafbe578eb0e3c4149a1f53d0a60a5a 1348 Gene3D G3DSA:1.10.8.750 146 205 8.6E-20 T 17-10-2018 BJD13_21400 aaafbe578eb0e3c4149a1f53d0a60a5a 1348 SMART SM01211 1096 1347 5.9E-145 T 17-10-2018 BJD13_21400 aaafbe578eb0e3c4149a1f53d0a60a5a 1348 SUPERFAMILY SSF56042 872 1089 5.83E-49 T 17-10-2018 IPR036676 PurM-like, C-terminal domain superfamily BJD13_21400 aaafbe578eb0e3c4149a1f53d0a60a5a 1348 Gene3D G3DSA:3.30.1330.10 647 817 4.3E-22 T 17-10-2018 IPR036921 PurM-like, N-terminal domain superfamily BJD13_21400 aaafbe578eb0e3c4149a1f53d0a60a5a 1348 Pfam PF02769 AIR synthase related protein, C-terminal domain 421 579 1.2E-30 T 17-10-2018 IPR010918 PurM-like, C-terminal domain BJD13_21400 aaafbe578eb0e3c4149a1f53d0a60a5a 1348 Pfam PF02769 AIR synthase related protein, C-terminal domain 879 1022 5.8E-10 T 17-10-2018 IPR010918 PurM-like, C-terminal domain BJD13_21400 aaafbe578eb0e3c4149a1f53d0a60a5a 1348 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1348 20.517 T 17-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BJD13_21400 aaafbe578eb0e3c4149a1f53d0a60a5a 1348 SUPERFAMILY SSF55326 644 864 1.88E-58 T 17-10-2018 IPR036921 PurM-like, N-terminal domain superfamily BJD13_21400 aaafbe578eb0e3c4149a1f53d0a60a5a 1348 Gene3D G3DSA:3.90.650.10 859 1038 1.5E-30 T 17-10-2018 IPR036676 PurM-like, C-terminal domain superfamily BJD13_21400 aaafbe578eb0e3c4149a1f53d0a60a5a 1348 Gene3D G3DSA:3.90.650.10 412 586 2.6E-51 T 17-10-2018 IPR036676 PurM-like, C-terminal domain superfamily BJD13_21400 aaafbe578eb0e3c4149a1f53d0a60a5a 1348 SUPERFAMILY SSF56042 421 678 1.14E-49 T 17-10-2018 IPR036676 PurM-like, C-terminal domain superfamily BJD13_21400 aaafbe578eb0e3c4149a1f53d0a60a5a 1348 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 4 815 0.0 T 17-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BJD13_03370 13c3194af5210f9144bf1af204521b81 343 Pfam PF04335 VirB8 protein 21 241 5.3E-47 T 17-10-2018 IPR007430 Bacterial virulence protein VirB8 GO:0016020 BJD13_03370 13c3194af5210f9144bf1af204521b81 343 Gene3D G3DSA:3.10.450.230 96 245 1.1E-39 T 17-10-2018 BJD13_03370 13c3194af5210f9144bf1af204521b81 343 SUPERFAMILY SSF54427 97 243 1.14E-33 T 17-10-2018 IPR032710 NTF2-like domain superfamily BJD13_15885 a630cbef62669cfc5aa9496111a5ea66 338 Gene3D G3DSA:3.40.47.10 1 198 2.0E-75 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 BJD13_15885 a630cbef62669cfc5aa9496111a5ea66 338 SUPERFAMILY SSF53901 46 338 5.09E-40 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 BJD13_15885 a630cbef62669cfc5aa9496111a5ea66 338 Gene3D G3DSA:3.40.47.10 199 338 2.2E-35 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 BJD13_15885 a630cbef62669cfc5aa9496111a5ea66 338 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 117 195 1.1E-7 T 17-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 BJD13_15885 a630cbef62669cfc5aa9496111a5ea66 338 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 253 333 1.7E-18 T 17-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 BJD13_04110 d341aaccd34a1e76c3635b607334644f 438 Gene3D G3DSA:3.30.9.10 135 356 3.1E-69 T 17-10-2018 BJD13_04110 d341aaccd34a1e76c3635b607334644f 438 SUPERFAMILY SSF51905 41 431 1.17E-39 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_04110 d341aaccd34a1e76c3635b607334644f 438 Pfam PF01266 FAD dependent oxidoreductase 43 393 1.0E-49 T 17-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 BJD13_04110 d341aaccd34a1e76c3635b607334644f 438 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 306 321 7.9E-5 T 17-10-2018 BJD13_04110 d341aaccd34a1e76c3635b607334644f 438 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 43 65 7.9E-5 T 17-10-2018 BJD13_04110 d341aaccd34a1e76c3635b607334644f 438 Gene3D G3DSA:3.50.50.60 43 395 3.1E-69 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_12745 03c7901e8ad121e8acd3f48b80293b3c 585 Pfam PF00082 Subtilase family 312 569 8.7E-12 T 17-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 BJD13_12745 03c7901e8ad121e8acd3f48b80293b3c 585 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 499 509 - T 17-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site BJD13_12745 03c7901e8ad121e8acd3f48b80293b3c 585 Gene3D G3DSA:3.40.50.200 204 584 2.9E-69 T 17-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BJD13_12745 03c7901e8ad121e8acd3f48b80293b3c 585 SUPERFAMILY SSF54897 26 174 1.48E-22 T 17-10-2018 BJD13_12745 03c7901e8ad121e8acd3f48b80293b3c 585 SMART SM00944 30 170 9.3E-24 T 17-10-2018 IPR015366 Peptidase S53, activation domain GO:0008236 Reactome: R-HSA-381038 BJD13_12745 03c7901e8ad121e8acd3f48b80293b3c 585 SUPERFAMILY SSF52743 208 576 8.38E-52 T 17-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BJD13_12745 03c7901e8ad121e8acd3f48b80293b3c 585 Pfam PF09286 Pro-kumamolisin, activation domain 39 168 1.6E-9 T 17-10-2018 IPR015366 Peptidase S53, activation domain GO:0008236 Reactome: R-HSA-381038 BJD13_06945 78bac89f71148efd4b58e1da26e606c9 863 Pfam PF00330 Aconitase family (aconitate hydratase) 474 817 1.6E-38 T 17-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BJD13_06945 78bac89f71148efd4b58e1da26e606c9 863 ProSitePatterns PS00450 Aconitase family signature 1. 705 722 - T 17-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 BJD13_06945 78bac89f71148efd4b58e1da26e606c9 863 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 856 0.0 T 17-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 BJD13_06945 78bac89f71148efd4b58e1da26e606c9 863 SUPERFAMILY SSF52016 162 372 1.77E-64 T 17-10-2018 BJD13_06945 78bac89f71148efd4b58e1da26e606c9 863 SUPERFAMILY SSF53732 380 856 5.1E-144 T 17-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 BJD13_06945 78bac89f71148efd4b58e1da26e606c9 863 Gene3D G3DSA:3.30.499.10 686 863 2.0E-63 T 17-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 BJD13_06945 78bac89f71148efd4b58e1da26e606c9 863 Gene3D G3DSA:3.20.19.10 162 361 4.8E-68 T 17-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 BJD13_06945 78bac89f71148efd4b58e1da26e606c9 863 PIRSF PIRSF036687 1 861 0.0 T 17-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 BJD13_06945 78bac89f71148efd4b58e1da26e606c9 863 Gene3D G3DSA:1.25.40.310 1 161 2.9E-68 T 17-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 BJD13_06945 78bac89f71148efd4b58e1da26e606c9 863 Gene3D G3DSA:3.30.499.10 405 532 1.3E-149 T 17-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 BJD13_06945 78bac89f71148efd4b58e1da26e606c9 863 Gene3D G3DSA:3.40.1060.10 385 684 1.3E-149 T 17-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 BJD13_06945 78bac89f71148efd4b58e1da26e606c9 863 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 8.6E-94 T 17-10-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 BJD13_06945 78bac89f71148efd4b58e1da26e606c9 863 Pfam PF11791 Aconitate B N-terminal domain 4 156 4.1E-65 T 17-10-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 BJD13_06945 78bac89f71148efd4b58e1da26e606c9 863 SUPERFAMILY SSF74778 1 160 3.14E-67 T 17-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 BJD13_15760 c578a3cf25e455c3a2185027ed914b3f 431 PIRSF PIRSF001362 1 428 1.0E-234 T 17-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 BJD13_15760 c578a3cf25e455c3a2185027ed914b3f 431 Gene3D G3DSA:3.20.20.60 4 408 3.6E-170 T 17-10-2018 BJD13_15760 c578a3cf25e455c3a2185027ed914b3f 431 ProSitePatterns PS00161 Isocitrate lyase signature. 186 191 - T 17-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 BJD13_15760 c578a3cf25e455c3a2185027ed914b3f 431 Pfam PF00463 Isocitrate lyase family 13 248 8.2E-57 T 17-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 BJD13_15760 c578a3cf25e455c3a2185027ed914b3f 431 Pfam PF00463 Isocitrate lyase family 249 425 1.8E-43 T 17-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 BJD13_15760 c578a3cf25e455c3a2185027ed914b3f 431 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 9 248 9.6E-107 T 17-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 BJD13_15760 c578a3cf25e455c3a2185027ed914b3f 431 SUPERFAMILY SSF51621 3 425 6.28E-155 T 17-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 BJD13_18485 830d180efbf2e81c57a87c2bd149b283 2727 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 77 150 4.3E-22 T 17-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal BJD13_18485 830d180efbf2e81c57a87c2bd149b283 2727 SUPERFAMILY SSF51126 53 324 1.19E-28 T 17-10-2018 IPR011050 Pectin lyase fold/virulence factor BJD13_18485 830d180efbf2e81c57a87c2bd149b283 2727 SMART SM00912 42 155 6.6E-28 T 17-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal BJD13_18485 830d180efbf2e81c57a87c2bd149b283 2727 Gene3D G3DSA:2.160.20.10 45 431 9.3E-55 T 17-10-2018 IPR012334 Pectin lyase fold BJD13_18485 830d180efbf2e81c57a87c2bd149b283 2727 Pfam PF05860 haemagglutination activity domain 50 152 1.1E-18 T 17-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal BJD13_18405 190e9b475230548ac2154b45ea7734cb 839 SMART SM00220 91 368 4.6E-40 T 17-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 BJD13_18405 190e9b475230548ac2154b45ea7734cb 839 Gene3D G3DSA:1.10.510.10 176 372 7.1E-35 T 17-10-2018 BJD13_18405 190e9b475230548ac2154b45ea7734cb 839 Pfam PF00069 Protein kinase domain 93 299 3.9E-35 T 17-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 BJD13_18405 190e9b475230548ac2154b45ea7734cb 839 Gene3D G3DSA:1.25.40.10 453 589 3.5E-6 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_18405 190e9b475230548ac2154b45ea7734cb 839 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 211 223 - T 17-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 BJD13_18405 190e9b475230548ac2154b45ea7734cb 839 Gene3D G3DSA:3.30.200.20 46 175 7.4E-23 T 17-10-2018 BJD13_18405 190e9b475230548ac2154b45ea7734cb 839 Pfam PF13424 Tetratricopeptide repeat 645 717 6.9E-9 T 17-10-2018 BJD13_18405 190e9b475230548ac2154b45ea7734cb 839 Pfam PF13424 Tetratricopeptide repeat 731 800 3.7E-9 T 17-10-2018 BJD13_18405 190e9b475230548ac2154b45ea7734cb 839 SUPERFAMILY SSF48452 684 799 3.33E-11 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_18405 190e9b475230548ac2154b45ea7734cb 839 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 97 122 - T 17-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 BJD13_18405 190e9b475230548ac2154b45ea7734cb 839 Gene3D G3DSA:1.25.40.10 594 804 3.2E-34 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_18405 190e9b475230548ac2154b45ea7734cb 839 SUPERFAMILY SSF48452 466 580 2.21E-6 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_18405 190e9b475230548ac2154b45ea7734cb 839 SUPERFAMILY SSF56112 88 391 9.08E-56 T 17-10-2018 IPR011009 Protein kinase-like domain superfamily BJD13_06835 4f9e7d661a92e959d7a61aafd064bdd8 929 Gene3D G3DSA:1.10.287.950 572 873 8.8E-87 T 17-10-2018 BJD13_06835 4f9e7d661a92e959d7a61aafd064bdd8 929 Pfam PF00672 HAMP domain 345 393 5.6E-7 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_06835 4f9e7d661a92e959d7a61aafd064bdd8 929 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 645 674 5.6E-58 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD13_06835 4f9e7d661a92e959d7a61aafd064bdd8 929 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 722 749 5.6E-58 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD13_06835 4f9e7d661a92e959d7a61aafd064bdd8 929 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 751 780 5.6E-58 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD13_06835 4f9e7d661a92e959d7a61aafd064bdd8 929 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 799 828 5.6E-58 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD13_06835 4f9e7d661a92e959d7a61aafd064bdd8 929 SUPERFAMILY SSF58104 591 872 1.44E-71 T 17-10-2018 BJD13_06835 4f9e7d661a92e959d7a61aafd064bdd8 929 SUPERFAMILY SSF158472 345 396 5.89E-10 T 17-10-2018 BJD13_06835 4f9e7d661a92e959d7a61aafd064bdd8 929 Gene3D G3DSA:3.30.450.20 70 217 1.6E-56 T 17-10-2018 BJD13_06835 4f9e7d661a92e959d7a61aafd064bdd8 929 SMART SM00283 624 871 1.0E-92 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD13_06835 4f9e7d661a92e959d7a61aafd064bdd8 929 Gene3D G3DSA:3.30.450.20 60 312 1.6E-56 T 17-10-2018 BJD13_06835 4f9e7d661a92e959d7a61aafd064bdd8 929 SMART SM00304 345 397 6.4E-10 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_06835 4f9e7d661a92e959d7a61aafd064bdd8 929 SMART SM00304 571 623 3.8 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_06835 4f9e7d661a92e959d7a61aafd064bdd8 929 Pfam PF02743 Cache domain 44 285 3.1E-14 T 17-10-2018 IPR033479 Double Cache domain 1 BJD13_06835 4f9e7d661a92e959d7a61aafd064bdd8 929 Gene3D G3DSA:1.20.1480.50 313 402 2.6E-14 T 17-10-2018 BJD13_06835 4f9e7d661a92e959d7a61aafd064bdd8 929 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 684 838 1.8E-54 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD13_06835 4f9e7d661a92e959d7a61aafd064bdd8 929 Gene3D G3DSA:3.30.450.20 403 527 2.4E-18 T 17-10-2018 BJD13_21380 99f32ee9bd027fc22d962f49c991e0f7 323 Pfam PF00589 Phage integrase family 131 308 5.7E-46 T 17-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 BJD13_21380 99f32ee9bd027fc22d962f49c991e0f7 323 Gene3D G3DSA:1.10.150.130 23 117 8.9E-17 T 17-10-2018 IPR010998 Integrase/recombinase, N-terminal BJD13_21380 99f32ee9bd027fc22d962f49c991e0f7 323 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 27 103 2.7E-14 T 17-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 BJD13_21380 99f32ee9bd027fc22d962f49c991e0f7 323 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 28 322 3.9E-112 T 17-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 BJD13_21380 99f32ee9bd027fc22d962f49c991e0f7 323 Gene3D G3DSA:1.10.443.10 130 317 4.9E-64 T 17-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 BJD13_21380 99f32ee9bd027fc22d962f49c991e0f7 323 SUPERFAMILY SSF56349 125 321 1.44E-54 T 17-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BJD13_21380 99f32ee9bd027fc22d962f49c991e0f7 323 SUPERFAMILY SSF47823 23 119 6.08E-31 T 17-10-2018 BJD13_21380 99f32ee9bd027fc22d962f49c991e0f7 323 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 25 323 54.339 T 17-10-2018 IPR023009 Tyrosine recombinase XerC/XerD BJD13_21380 99f32ee9bd027fc22d962f49c991e0f7 323 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 23 323 62.224 T 17-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 BJD13_21705 995bcd2963895d9b84505b1fd72752d3 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 4.4E-12 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_21705 995bcd2963895d9b84505b1fd72752d3 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 4.4E-12 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_21705 995bcd2963895d9b84505b1fd72752d3 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 4.4E-12 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_21705 995bcd2963895d9b84505b1fd72752d3 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 189 0.0052 T 17-10-2018 BJD13_21705 995bcd2963895d9b84505b1fd72752d3 246 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 4 245 1.2E-98 T 17-10-2018 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|MetaCyc: PWY-7948 BJD13_21705 995bcd2963895d9b84505b1fd72752d3 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 243 2.4E-52 T 17-10-2018 BJD13_21705 995bcd2963895d9b84505b1fd72752d3 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 3.0E-36 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_21705 995bcd2963895d9b84505b1fd72752d3 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 3.0E-36 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_21705 995bcd2963895d9b84505b1fd72752d3 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 3.0E-36 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_21705 995bcd2963895d9b84505b1fd72752d3 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 3.0E-36 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_21705 995bcd2963895d9b84505b1fd72752d3 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 3.0E-36 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_21705 995bcd2963895d9b84505b1fd72752d3 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 3.0E-36 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_21705 995bcd2963895d9b84505b1fd72752d3 246 Gene3D G3DSA:3.40.50.720 1 245 8.3E-72 T 17-10-2018 BJD13_21705 995bcd2963895d9b84505b1fd72752d3 246 SUPERFAMILY SSF51735 4 245 1.17E-66 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_21940 0706eafc3366cebf5333e4bde845c5d0 382 SUPERFAMILY SSF52172 12 142 3.13E-11 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_21940 0706eafc3366cebf5333e4bde845c5d0 382 Pfam PF08668 HDOD domain 151 326 3.0E-27 T 17-10-2018 IPR013976 Metal-dependent hydrolase HDOD BJD13_21940 0706eafc3366cebf5333e4bde845c5d0 382 Gene3D G3DSA:3.40.50.2300 10 141 3.6E-8 T 17-10-2018 BJD13_21940 0706eafc3366cebf5333e4bde845c5d0 382 SUPERFAMILY SSF109604 140 350 3.45E-39 T 17-10-2018 BJD13_21940 0706eafc3366cebf5333e4bde845c5d0 382 Gene3D G3DSA:1.10.3210.10 142 368 7.3E-44 T 17-10-2018 BJD13_21940 0706eafc3366cebf5333e4bde845c5d0 382 PIRSF PIRSF036883 7 380 3.3E-171 T 17-10-2018 IPR014626 Signal transduction response regulator with modified HD-GYP domain, putative BJD13_13465 27484002d9d5ad7e2502d1badb2b3484 659 Gene3D G3DSA:2.140.10.10 44 630 3.9E-196 T 17-10-2018 BJD13_13465 27484002d9d5ad7e2502d1badb2b3484 659 Pfam PF13360 PQQ-like domain 126 237 4.3E-12 T 17-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat BJD13_13465 27484002d9d5ad7e2502d1badb2b3484 659 TIGRFAM TIGR03075 PQQ_enz_alc_DH: PQQ-dependent dehydrogenase, methanol/ethanol family 42 585 9.4E-179 T 17-10-2018 IPR017512 PQQ-dependent dehydrogenase, methanol/ethanol family GO:0005509|GO:0016020|GO:0016614|GO:0055114 BJD13_13465 27484002d9d5ad7e2502d1badb2b3484 659 SMART SM00564 99 136 720.0 T 17-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BJD13_13465 27484002d9d5ad7e2502d1badb2b3484 659 SMART SM00564 155 187 1.1E-5 T 17-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BJD13_13465 27484002d9d5ad7e2502d1badb2b3484 659 SMART SM00564 201 238 43.0 T 17-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BJD13_13465 27484002d9d5ad7e2502d1badb2b3484 659 SMART SM00564 525 557 6.6E-5 T 17-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BJD13_13465 27484002d9d5ad7e2502d1badb2b3484 659 SUPERFAMILY SSF50998 50 595 2.88E-142 T 17-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily BJD13_13465 27484002d9d5ad7e2502d1badb2b3484 659 Pfam PF13570 PQQ-like domain 509 549 2.2E-7 T 17-10-2018 IPR025666 Pyrrolo-quinoline quinone-like domain BJD13_21535 d6633c30dd8c0e99cc94c2b8255b0c5b 392 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 2 386 9.4E-140 T 17-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 BJD13_21535 d6633c30dd8c0e99cc94c2b8255b0c5b 392 PIRSF PIRSF000484 1 371 3.6E-69 T 17-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 BJD13_21535 d6633c30dd8c0e99cc94c2b8255b0c5b 392 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 1 388 47.15 T 17-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 BJD13_21535 d6633c30dd8c0e99cc94c2b8255b0c5b 392 Gene3D G3DSA:3.20.140.10 1 389 2.7E-148 T 17-10-2018 BJD13_21535 d6633c30dd8c0e99cc94c2b8255b0c5b 392 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 161 386 3.8E-77 T 17-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 BJD13_21535 d6633c30dd8c0e99cc94c2b8255b0c5b 392 SUPERFAMILY SSF51690 118 386 7.46E-89 T 17-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 BJD13_21535 d6633c30dd8c0e99cc94c2b8255b0c5b 392 SUPERFAMILY SSF54675 1 136 1.31E-43 T 17-10-2018 BJD13_19265 645161c53bd9e055ee0e3732c8fc7690 358 PRINTS PR00406 Cytochrome B5 reductase signature 69 80 1.2E-7 T 17-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 BJD13_19265 645161c53bd9e055ee0e3732c8fc7690 358 PRINTS PR00406 Cytochrome B5 reductase signature 147 166 1.2E-7 T 17-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 BJD13_19265 645161c53bd9e055ee0e3732c8fc7690 358 PRINTS PR00406 Cytochrome B5 reductase signature 234 242 1.2E-7 T 17-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 BJD13_19265 645161c53bd9e055ee0e3732c8fc7690 358 PRINTS PR00406 Cytochrome B5 reductase signature 90 97 1.2E-7 T 17-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 BJD13_19265 645161c53bd9e055ee0e3732c8fc7690 358 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 282 334 6.4E-6 T 17-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 BJD13_19265 645161c53bd9e055ee0e3732c8fc7690 358 SUPERFAMILY SSF54292 257 357 6.69E-19 T 17-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 BJD13_19265 645161c53bd9e055ee0e3732c8fc7690 358 Gene3D G3DSA:2.40.30.10 38 135 1.9E-14 T 17-10-2018 BJD13_19265 645161c53bd9e055ee0e3732c8fc7690 358 Pfam PF00175 Oxidoreductase NAD-binding domain 148 248 8.9E-13 T 17-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 BJD13_19265 645161c53bd9e055ee0e3732c8fc7690 358 Gene3D G3DSA:3.10.20.30 266 358 1.1E-16 T 17-10-2018 IPR012675 Beta-grasp domain superfamily BJD13_19265 645161c53bd9e055ee0e3732c8fc7690 358 SUPERFAMILY SSF52343 139 254 2.1E-27 T 17-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BJD13_19265 645161c53bd9e055ee0e3732c8fc7690 358 Pfam PF00970 Oxidoreductase FAD-binding domain 46 135 3.0E-10 T 17-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 BJD13_19265 645161c53bd9e055ee0e3732c8fc7690 358 Gene3D G3DSA:3.40.50.80 138 265 1.1E-23 T 17-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BJD13_19265 645161c53bd9e055ee0e3732c8fc7690 358 SUPERFAMILY SSF63380 34 139 5.59E-18 T 17-10-2018 IPR017938 Riboflavin synthase-like beta-barrel BJD13_05860 aa8bc9555e12ba1eaf7edadbc405250d 967 Gene3D G3DSA:1.10.510.10 183 376 3.8E-33 T 17-10-2018 BJD13_05860 aa8bc9555e12ba1eaf7edadbc405250d 967 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 228 240 - T 17-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 BJD13_05860 aa8bc9555e12ba1eaf7edadbc405250d 967 Gene3D G3DSA:3.30.200.20 90 182 5.6E-22 T 17-10-2018 BJD13_05860 aa8bc9555e12ba1eaf7edadbc405250d 967 Gene3D G3DSA:3.90.1580.10 823 907 5.2E-6 T 17-10-2018 BJD13_05860 aa8bc9555e12ba1eaf7edadbc405250d 967 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 107 136 - T 17-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 BJD13_05860 aa8bc9555e12ba1eaf7edadbc405250d 967 SUPERFAMILY SSF56436 798 965 6.59E-18 T 17-10-2018 IPR016187 C-type lectin fold BJD13_05860 aa8bc9555e12ba1eaf7edadbc405250d 967 Pfam PF03781 Sulfatase-modifying factor enzyme 1 826 902 1.2E-9 T 17-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 BJD13_05860 aa8bc9555e12ba1eaf7edadbc405250d 967 Pfam PF00069 Protein kinase domain 104 362 4.6E-35 T 17-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 BJD13_05860 aa8bc9555e12ba1eaf7edadbc405250d 967 SUPERFAMILY SSF56112 100 365 1.5E-53 T 17-10-2018 IPR011009 Protein kinase-like domain superfamily BJD13_01405 0a371d1a037e32d02e12510c3e5338b2 62 Gene3D G3DSA:3.30.70.1680 1 59 5.0E-28 T 17-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 BJD13_01405 0a371d1a037e32d02e12510c3e5338b2 62 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 61 15.51 T 17-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 BJD13_01405 0a371d1a037e32d02e12510c3e5338b2 62 SUPERFAMILY SSF117130 1 54 1.96E-19 T 17-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 BJD13_01405 0a371d1a037e32d02e12510c3e5338b2 62 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 9.0E-16 T 17-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 BJD13_01405 0a371d1a037e32d02e12510c3e5338b2 62 Pfam PF02599 Global regulator protein family 1 52 4.0E-25 T 17-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 BJD13_01405 0a371d1a037e32d02e12510c3e5338b2 62 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 58 4.5E-25 T 17-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 BJD13_08030 51af47348a7e37a1b2ba872c85fd4658 629 Gene3D G3DSA:3.30.565.10 3 215 3.7E-74 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_08030 51af47348a7e37a1b2ba872c85fd4658 629 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 170 6.5E-16 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_08030 51af47348a7e37a1b2ba872c85fd4658 629 SMART SM00387 27 173 1.1E-19 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_08030 51af47348a7e37a1b2ba872c85fd4658 629 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 557 619 1.7E-23 T 17-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 BJD13_08030 51af47348a7e37a1b2ba872c85fd4658 629 SUPERFAMILY SSF54211 217 380 1.27E-42 T 17-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BJD13_08030 51af47348a7e37a1b2ba872c85fd4658 629 SMART SM00433 34 623 1.6E-198 T 17-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BJD13_08030 51af47348a7e37a1b2ba872c85fd4658 629 PRINTS PR01098 Topoisomerase IV subunit B signature 337 360 5.2E-98 T 17-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BJD13_08030 51af47348a7e37a1b2ba872c85fd4658 629 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 5.2E-98 T 17-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BJD13_08030 51af47348a7e37a1b2ba872c85fd4658 629 PRINTS PR01098 Topoisomerase IV subunit B signature 361 386 5.2E-98 T 17-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BJD13_08030 51af47348a7e37a1b2ba872c85fd4658 629 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 5.2E-98 T 17-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BJD13_08030 51af47348a7e37a1b2ba872c85fd4658 629 PRINTS PR01098 Topoisomerase IV subunit B signature 502 518 5.2E-98 T 17-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BJD13_08030 51af47348a7e37a1b2ba872c85fd4658 629 PRINTS PR01098 Topoisomerase IV subunit B signature 447 468 5.2E-98 T 17-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BJD13_08030 51af47348a7e37a1b2ba872c85fd4658 629 PRINTS PR01098 Topoisomerase IV subunit B signature 536 558 5.2E-98 T 17-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BJD13_08030 51af47348a7e37a1b2ba872c85fd4658 629 PRINTS PR01098 Topoisomerase IV subunit B signature 468 480 5.2E-98 T 17-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BJD13_08030 51af47348a7e37a1b2ba872c85fd4658 629 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 5.2E-98 T 17-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BJD13_08030 51af47348a7e37a1b2ba872c85fd4658 629 PRINTS PR01098 Topoisomerase IV subunit B signature 310 325 5.2E-98 T 17-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BJD13_08030 51af47348a7e37a1b2ba872c85fd4658 629 PRINTS PR01098 Topoisomerase IV subunit B signature 293 309 5.2E-98 T 17-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BJD13_08030 51af47348a7e37a1b2ba872c85fd4658 629 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 5.2E-98 T 17-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BJD13_08030 51af47348a7e37a1b2ba872c85fd4658 629 PRINTS PR01098 Topoisomerase IV subunit B signature 583 597 5.2E-98 T 17-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BJD13_08030 51af47348a7e37a1b2ba872c85fd4658 629 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 5.2E-98 T 17-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BJD13_08030 51af47348a7e37a1b2ba872c85fd4658 629 SUPERFAMILY SSF55874 4 215 9.45E-65 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_08030 51af47348a7e37a1b2ba872c85fd4658 629 Gene3D G3DSA:3.40.50.670 389 622 2.6E-86 T 17-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BJD13_08030 51af47348a7e37a1b2ba872c85fd4658 629 Pfam PF01751 Toprim domain 412 509 1.1E-11 T 17-10-2018 IPR006171 TOPRIM domain BJD13_08030 51af47348a7e37a1b2ba872c85fd4658 629 Gene3D G3DSA:3.30.230.10 218 388 6.1E-55 T 17-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BJD13_08030 51af47348a7e37a1b2ba872c85fd4658 629 Pfam PF00204 DNA gyrase B 218 383 1.3E-36 T 17-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BJD13_08030 51af47348a7e37a1b2ba872c85fd4658 629 PRINTS PR00418 DNA topoisomerase II family signature 66 79 2.7E-57 T 17-10-2018 BJD13_08030 51af47348a7e37a1b2ba872c85fd4658 629 PRINTS PR00418 DNA topoisomerase II family signature 413 427 2.7E-57 T 17-10-2018 BJD13_08030 51af47348a7e37a1b2ba872c85fd4658 629 PRINTS PR00418 DNA topoisomerase II family signature 516 528 2.7E-57 T 17-10-2018 BJD13_08030 51af47348a7e37a1b2ba872c85fd4658 629 PRINTS PR00418 DNA topoisomerase II family signature 109 123 2.7E-57 T 17-10-2018 BJD13_08030 51af47348a7e37a1b2ba872c85fd4658 629 PRINTS PR00418 DNA topoisomerase II family signature 496 513 2.7E-57 T 17-10-2018 BJD13_08030 51af47348a7e37a1b2ba872c85fd4658 629 PRINTS PR00418 DNA topoisomerase II family signature 31 46 2.7E-57 T 17-10-2018 BJD13_08030 51af47348a7e37a1b2ba872c85fd4658 629 PRINTS PR00418 DNA topoisomerase II family signature 265 278 2.7E-57 T 17-10-2018 BJD13_08030 51af47348a7e37a1b2ba872c85fd4658 629 PRINTS PR00418 DNA topoisomerase II family signature 478 494 2.7E-57 T 17-10-2018 BJD13_08030 51af47348a7e37a1b2ba872c85fd4658 629 PRINTS PR00418 DNA topoisomerase II family signature 561 577 2.7E-57 T 17-10-2018 BJD13_08030 51af47348a7e37a1b2ba872c85fd4658 629 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 3 624 6.6E-289 T 17-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BJD13_08030 51af47348a7e37a1b2ba872c85fd4658 629 SUPERFAMILY SSF56719 387 620 1.7E-74 T 17-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 BJD13_08030 51af47348a7e37a1b2ba872c85fd4658 629 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 627 46.18 T 17-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BJD13_08030 51af47348a7e37a1b2ba872c85fd4658 629 ProSitePatterns PS00177 DNA topoisomerase II signature. 415 423 - T 17-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BJD13_04765 c7cc94f65c5d6e170ee64e8dfac22805 645 Pfam PF01578 Cytochrome C assembly protein 89 295 3.5E-52 T 17-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 BJD13_04765 c7cc94f65c5d6e170ee64e8dfac22805 645 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 355 372 1.8E-48 T 17-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD13_04765 c7cc94f65c5d6e170ee64e8dfac22805 645 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 1.8E-48 T 17-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD13_04765 c7cc94f65c5d6e170ee64e8dfac22805 645 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 398 417 1.8E-48 T 17-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD13_04765 c7cc94f65c5d6e170ee64e8dfac22805 645 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 1.8E-48 T 17-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD13_04765 c7cc94f65c5d6e170ee64e8dfac22805 645 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 627 640 1.8E-48 T 17-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD13_04765 c7cc94f65c5d6e170ee64e8dfac22805 645 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 189 204 1.8E-48 T 17-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD13_04765 c7cc94f65c5d6e170ee64e8dfac22805 645 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 3.9E-93 T 17-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD13_04765 c7cc94f65c5d6e170ee64e8dfac22805 645 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 159 181 3.9E-93 T 17-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD13_04765 c7cc94f65c5d6e170ee64e8dfac22805 645 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 274 294 3.9E-93 T 17-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD13_04765 c7cc94f65c5d6e170ee64e8dfac22805 645 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 294 310 3.9E-93 T 17-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD13_04765 c7cc94f65c5d6e170ee64e8dfac22805 645 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 244 264 3.9E-93 T 17-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD13_04765 c7cc94f65c5d6e170ee64e8dfac22805 645 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 310 329 3.9E-93 T 17-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD13_04765 c7cc94f65c5d6e170ee64e8dfac22805 645 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 3.9E-93 T 17-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD13_04765 c7cc94f65c5d6e170ee64e8dfac22805 645 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 210 236 3.9E-93 T 17-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD13_04765 c7cc94f65c5d6e170ee64e8dfac22805 645 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 315 634 5.0E-115 T 17-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal BJD13_04765 c7cc94f65c5d6e170ee64e8dfac22805 645 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 636 7.8E-221 T 17-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD13_23315 fa85b917a57db70ec258fb7666330e3b 250 Gene3D G3DSA:1.20.910.10 1 235 9.8E-60 T 17-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 BJD13_23315 fa85b917a57db70ec258fb7666330e3b 250 Hamap MF_00654 Pyrroloquinoline-quinone synthase [pqqC]. 1 250 117.982 T 17-10-2018 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420 BJD13_23315 fa85b917a57db70ec258fb7666330e3b 250 TIGRFAM TIGR02111 PQQ_syn_pqqC: coenzyme PQQ biosynthesis protein C 5 242 6.6E-128 T 17-10-2018 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420 BJD13_23315 fa85b917a57db70ec258fb7666330e3b 250 SUPERFAMILY SSF48613 3 231 1.16E-61 T 17-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 BJD13_23315 fa85b917a57db70ec258fb7666330e3b 250 Pfam PF03070 TENA/THI-4/PQQC family 12 222 1.5E-59 T 17-10-2018 IPR004305 Thiaminase-2/PQQC BJD13_02270 720985a0bbb84be6805692a7d34aa0e5 375 Pfam PF01339 CheB methylesterase 192 370 1.7E-60 T 17-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 BJD13_02270 720985a0bbb84be6805692a7d34aa0e5 375 Gene3D G3DSA:3.40.50.2300 19 158 3.1E-29 T 17-10-2018 BJD13_02270 720985a0bbb84be6805692a7d34aa0e5 375 SUPERFAMILY SSF52738 187 373 4.05E-70 T 17-10-2018 IPR035909 Methylesterase CheB, C-terminal BJD13_02270 720985a0bbb84be6805692a7d34aa0e5 375 Gene3D G3DSA:3.40.50.180 182 375 3.7E-75 T 17-10-2018 IPR035909 Methylesterase CheB, C-terminal BJD13_02270 720985a0bbb84be6805692a7d34aa0e5 375 SMART SM00448 21 144 3.0E-21 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_02270 720985a0bbb84be6805692a7d34aa0e5 375 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 21 375 40.066 T 17-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 BJD13_02270 720985a0bbb84be6805692a7d34aa0e5 375 SUPERFAMILY SSF52172 20 151 1.71E-27 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_02270 720985a0bbb84be6805692a7d34aa0e5 375 PIRSF PIRSF000876 18 375 8.6E-133 T 17-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 BJD13_02270 720985a0bbb84be6805692a7d34aa0e5 375 Pfam PF00072 Response regulator receiver domain 24 125 9.0E-23 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_19310 c9bc409f262399abb68673a41938f8f8 661 Gene3D G3DSA:1.20.58.460 509 647 2.6E-7 T 17-10-2018 BJD13_19310 c9bc409f262399abb68673a41938f8f8 661 Pfam PF07555 beta-N-acetylglucosaminidase 183 493 6.2E-103 T 17-10-2018 IPR011496 Beta-N-acetylglucosaminidase MetaCyc: PWY-7437 BJD13_19310 c9bc409f262399abb68673a41938f8f8 661 SUPERFAMILY SSF55545 33 178 2.49E-22 T 17-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 BJD13_19310 c9bc409f262399abb68673a41938f8f8 661 Gene3D G3DSA:3.20.20.80 179 500 8.9E-103 T 17-10-2018 BJD13_19310 c9bc409f262399abb68673a41938f8f8 661 Gene3D G3DSA:3.30.379.10 27 177 5.6E-29 T 17-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 BJD13_19310 c9bc409f262399abb68673a41938f8f8 661 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 36 177 1.1E-20 T 17-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal BJD13_19310 c9bc409f262399abb68673a41938f8f8 661 SUPERFAMILY SSF51445 180 509 5.47E-100 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily BJD13_15170 34d3bede59688ab8579887ea0c838f99 295 SUPERFAMILY SSF46689 247 293 7.62E-11 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_15170 34d3bede59688ab8579887ea0c838f99 295 Gene3D G3DSA:1.10.10.60 193 295 2.5E-23 T 17-10-2018 BJD13_15170 34d3bede59688ab8579887ea0c838f99 295 Pfam PF02311 AraC-like ligand binding domain 34 166 1.1E-13 T 17-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 BJD13_15170 34d3bede59688ab8579887ea0c838f99 295 Gene3D G3DSA:2.60.120.10 24 125 2.1E-7 T 17-10-2018 IPR014710 RmlC-like jelly roll fold BJD13_15170 34d3bede59688ab8579887ea0c838f99 295 SUPERFAMILY SSF51215 39 172 4.32E-12 T 17-10-2018 IPR037923 Transcription regulator HTH-like BJD13_15170 34d3bede59688ab8579887ea0c838f99 295 SMART SM00342 209 292 9.2E-20 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD13_15170 34d3bede59688ab8579887ea0c838f99 295 Pfam PF12833 Helix-turn-helix domain 215 293 2.1E-20 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD13_15170 34d3bede59688ab8579887ea0c838f99 295 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 261 276 5.7E-5 T 17-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BJD13_15170 34d3bede59688ab8579887ea0c838f99 295 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 276 292 5.7E-5 T 17-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BJD13_16185 9105a038289d3429f0934e9d56532abc 457 PIRSF PIRSF005962 45 455 2.0E-88 T 17-10-2018 IPR017439 Amidohydrolase GO:0016787 BJD13_16185 9105a038289d3429f0934e9d56532abc 457 Pfam PF01546 Peptidase family M20/M25/M40 118 407 2.4E-17 T 17-10-2018 IPR002933 Peptidase M20 GO:0016787 BJD13_16185 9105a038289d3429f0934e9d56532abc 457 SUPERFAMILY SSF55031 237 339 4.97E-25 T 17-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain BJD13_16185 9105a038289d3429f0934e9d56532abc 457 SUPERFAMILY SSF53187 48 453 1.67E-68 T 17-10-2018 BJD13_16185 9105a038289d3429f0934e9d56532abc 457 Gene3D G3DSA:3.30.70.360 235 351 9.6E-102 T 17-10-2018 BJD13_16185 9105a038289d3429f0934e9d56532abc 457 Gene3D G3DSA:3.40.630.10 63 430 9.6E-102 T 17-10-2018 BJD13_16185 9105a038289d3429f0934e9d56532abc 457 Pfam PF07687 Peptidase dimerisation domain 240 327 3.3E-9 T 17-10-2018 IPR011650 Peptidase M20, dimerisation domain BJD13_16185 9105a038289d3429f0934e9d56532abc 457 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 64 405 5.2E-75 T 17-10-2018 IPR017439 Amidohydrolase GO:0016787 BJD13_13115 824fdf5c50265e01586800314c42a03d 659 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 55 505 6.9E-155 T 17-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 BJD13_13115 824fdf5c50265e01586800314c42a03d 659 ProSitePatterns PS01303 BCCT family of transporters signature. 319 328 - T 17-10-2018 IPR018093 BCCT transporter, conserved site BJD13_13115 824fdf5c50265e01586800314c42a03d 659 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 17 505 5.3E-178 T 17-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 BJD13_11360 e532b0634fb45017e73958055f4cc16b 249 Hamap MF_00521 3-deoxy-D-manno-octulosonic acid kinase [kdkA]. 10 243 38.605 T 17-10-2018 IPR022826 3-deoxy-D-manno-octulosonic acid kinase GO:0016773 KEGG: 00540+2.7.1.166|MetaCyc: PWY-7675|MetaCyc: PWY-7676 BJD13_11360 e532b0634fb45017e73958055f4cc16b 249 SUPERFAMILY SSF56112 46 201 2.43E-16 T 17-10-2018 IPR011009 Protein kinase-like domain superfamily BJD13_11360 e532b0634fb45017e73958055f4cc16b 249 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 40 241 3.2E-68 T 17-10-2018 BJD13_11360 e532b0634fb45017e73958055f4cc16b 249 Gene3D G3DSA:1.10.510.10 152 245 5.4E-8 T 17-10-2018 BJD13_15975 81b1d26320ea86b6525bc06004674b20 259 Gene3D G3DSA:3.40.50.10090 14 239 3.9E-42 T 17-10-2018 BJD13_15975 81b1d26320ea86b6525bc06004674b20 259 SUPERFAMILY SSF69618 11 249 3.01E-44 T 17-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BJD13_15975 81b1d26320ea86b6525bc06004674b20 259 Gene3D G3DSA:3.40.50.10090 42 169 3.9E-42 T 17-10-2018 BJD13_15975 81b1d26320ea86b6525bc06004674b20 259 Pfam PF02602 Uroporphyrinogen-III synthase HemD 25 233 9.9E-23 T 17-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BJD13_01950 faf983588d3005570fe64fc0d06e734c 414 SUPERFAMILY SSF53383 13 411 9.21E-124 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD13_01950 faf983588d3005570fe64fc0d06e734c 414 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 16 413 8.6E-173 T 17-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 BJD13_01950 faf983588d3005570fe64fc0d06e734c 414 PIRSF PIRSF005572 31 412 5.6E-50 T 17-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 BJD13_01950 faf983588d3005570fe64fc0d06e734c 414 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 225 244 - T 17-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site BJD13_01950 faf983588d3005570fe64fc0d06e734c 414 Gene3D G3DSA:3.90.1150.10 17 406 6.2E-163 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD13_01950 faf983588d3005570fe64fc0d06e734c 414 Pfam PF00266 Aminotransferase class-V 34 402 1.9E-144 T 17-10-2018 IPR000192 Aminotransferase class V domain BJD13_01950 faf983588d3005570fe64fc0d06e734c 414 Gene3D G3DSA:3.40.640.10 45 304 6.2E-163 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD13_18415 979c98ed0226945c64ad6e641ed6c84f 443 Pfam PF08241 Methyltransferase domain 284 374 2.5E-11 T 17-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 BJD13_18415 979c98ed0226945c64ad6e641ed6c84f 443 Gene3D G3DSA:3.40.50.150 237 415 1.2E-24 T 17-10-2018 BJD13_18415 979c98ed0226945c64ad6e641ed6c84f 443 SUPERFAMILY SSF48452 15 221 6.64E-33 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_18415 979c98ed0226945c64ad6e641ed6c84f 443 Gene3D G3DSA:1.25.40.10 1 164 2.5E-30 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_18415 979c98ed0226945c64ad6e641ed6c84f 443 Pfam PF00515 Tetratricopeptide repeat 76 107 6.1E-8 T 17-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 BJD13_18415 979c98ed0226945c64ad6e641ed6c84f 443 SMART SM00028 110 143 20.0 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD13_18415 979c98ed0226945c64ad6e641ed6c84f 443 SMART SM00028 76 109 1.5E-6 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD13_18415 979c98ed0226945c64ad6e641ed6c84f 443 SMART SM00028 182 215 260.0 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD13_18415 979c98ed0226945c64ad6e641ed6c84f 443 SMART SM00028 144 181 92.0 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD13_18415 979c98ed0226945c64ad6e641ed6c84f 443 SMART SM00028 42 75 0.15 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD13_18415 979c98ed0226945c64ad6e641ed6c84f 443 Gene3D G3DSA:1.25.40.10 165 228 6.8E-7 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_18415 979c98ed0226945c64ad6e641ed6c84f 443 SUPERFAMILY SSF53335 238 421 1.49E-27 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_15620 4a71507d126f6edf3a612358749ac639 142 Pfam PF02566 OsmC-like protein 44 139 2.8E-19 T 17-10-2018 IPR003718 OsmC/Ohr family BJD13_15620 4a71507d126f6edf3a612358749ac639 142 Gene3D G3DSA:3.30.300.20 49 141 1.6E-34 T 17-10-2018 IPR015946 K homology domain-like, alpha/beta BJD13_15620 4a71507d126f6edf3a612358749ac639 142 SUPERFAMILY SSF82784 5 141 1.96E-44 T 17-10-2018 IPR036102 OsmC/Ohr superfamily BJD13_15620 4a71507d126f6edf3a612358749ac639 142 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 8 140 3.0E-55 T 17-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 BJD13_15620 4a71507d126f6edf3a612358749ac639 142 Gene3D G3DSA:2.20.25.10 1 48 3.3E-23 T 17-10-2018 BJD13_07580 fc8cca920c9a681fde283cc668dd167b 408 Gene3D G3DSA:3.30.565.10 264 406 9.8E-18 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_07580 fc8cca920c9a681fde283cc668dd167b 408 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 298 402 6.2E-10 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_07580 fc8cca920c9a681fde283cc668dd167b 408 SUPERFAMILY SSF47384 197 241 1.04E-5 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD13_07580 fc8cca920c9a681fde283cc668dd167b 408 SMART SM00387 295 403 8.0E-12 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_07580 fc8cca920c9a681fde283cc668dd167b 408 PRINTS PR00344 Bacterial sensor protein C-terminal signature 363 381 9.0E-6 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_07580 fc8cca920c9a681fde283cc668dd167b 408 PRINTS PR00344 Bacterial sensor protein C-terminal signature 334 348 9.0E-6 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_07580 fc8cca920c9a681fde283cc668dd167b 408 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 400 9.0E-6 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_07580 fc8cca920c9a681fde283cc668dd167b 408 SUPERFAMILY SSF55874 272 401 4.19E-19 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_07580 fc8cca920c9a681fde283cc668dd167b 408 Gene3D G3DSA:1.10.287.130 174 255 5.1E-7 T 17-10-2018 BJD13_02015 518a279afc5240ba5c0777da61f65bd4 230 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 4 221 30.959 T 17-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 BJD13_02015 518a279afc5240ba5c0777da61f65bd4 230 Pfam PF01168 Alanine racemase, N-terminal domain 16 222 5.3E-31 T 17-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BJD13_02015 518a279afc5240ba5c0777da61f65bd4 230 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 7 222 1.0E-70 T 17-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 BJD13_02015 518a279afc5240ba5c0777da61f65bd4 230 PIRSF PIRSF004848 3 227 2.8E-74 T 17-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 BJD13_02015 518a279afc5240ba5c0777da61f65bd4 230 Gene3D G3DSA:3.20.20.10 3 227 9.0E-81 T 17-10-2018 IPR029066 PLP-binding barrel BJD13_02015 518a279afc5240ba5c0777da61f65bd4 230 SUPERFAMILY SSF51419 5 220 2.22E-73 T 17-10-2018 IPR029066 PLP-binding barrel BJD13_16745 ec9cebe17c5aac28033c6539abe2790d 261 Pfam PF08975 Domain of unknown function (DUF1868) 42 158 4.2E-32 T 17-10-2018 IPR015069 Domain of unknown function DUF1868 BJD13_16745 ec9cebe17c5aac28033c6539abe2790d 261 SUPERFAMILY SSF55144 26 259 5.41E-53 T 17-10-2018 IPR009097 Cyclic phosphodiesterase BJD13_16745 ec9cebe17c5aac28033c6539abe2790d 261 Gene3D G3DSA:3.90.1140.10 15 261 7.6E-63 T 17-10-2018 BJD13_16745 ec9cebe17c5aac28033c6539abe2790d 261 PIRSF PIRSF033949 1 261 1.8E-107 T 17-10-2018 IPR012390 Phosphoesterase SP1827 BJD13_21730 0989a4c1efcd665949294c70c8eeb8c9 463 SUPERFAMILY SSF55874 298 459 4.98E-36 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_21730 0989a4c1efcd665949294c70c8eeb8c9 463 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 352 459 5.4E-20 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_21730 0989a4c1efcd665949294c70c8eeb8c9 463 SUPERFAMILY SSF47384 225 300 2.16E-13 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD13_21730 0989a4c1efcd665949294c70c8eeb8c9 463 Pfam PF00512 His Kinase A (phospho-acceptor) domain 243 300 2.7E-9 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_21730 0989a4c1efcd665949294c70c8eeb8c9 463 Gene3D G3DSA:1.10.287.130 189 300 2.6E-14 T 17-10-2018 BJD13_21730 0989a4c1efcd665949294c70c8eeb8c9 463 Pfam PF08521 Two-component sensor kinase N-terminal 25 165 4.2E-38 T 17-10-2018 IPR013727 Two-component sensor kinase, N-terminal BJD13_21730 0989a4c1efcd665949294c70c8eeb8c9 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 440 2.9E-13 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_21730 0989a4c1efcd665949294c70c8eeb8c9 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 418 2.9E-13 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_21730 0989a4c1efcd665949294c70c8eeb8c9 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 446 459 2.9E-13 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_21730 0989a4c1efcd665949294c70c8eeb8c9 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 404 2.9E-13 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_21730 0989a4c1efcd665949294c70c8eeb8c9 463 Gene3D G3DSA:3.30.565.10 311 460 5.7E-34 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_21730 0989a4c1efcd665949294c70c8eeb8c9 463 SMART SM00388 242 307 1.0E-9 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_21730 0989a4c1efcd665949294c70c8eeb8c9 463 SMART SM00387 352 462 2.8E-30 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_05260 094822adf98def2b472a7e53e356c6dd 1169 Gene3D G3DSA:3.30.70.1320 153 206 3.1E-64 T 17-10-2018 BJD13_05260 094822adf98def2b472a7e53e356c6dd 1169 SUPERFAMILY SSF82693 62 153 6.8E-19 T 17-10-2018 BJD13_05260 094822adf98def2b472a7e53e356c6dd 1169 Pfam PF00873 AcrB/AcrD/AcrF family 636 1137 7.3E-117 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_05260 094822adf98def2b472a7e53e356c6dd 1169 Pfam PF00873 AcrB/AcrD/AcrF family 25 278 2.8E-56 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_05260 094822adf98def2b472a7e53e356c6dd 1169 Pfam PF00873 AcrB/AcrD/AcrF family 296 560 3.8E-77 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_05260 094822adf98def2b472a7e53e356c6dd 1169 Gene3D G3DSA:3.30.70.1430 61 152 3.1E-64 T 17-10-2018 BJD13_05260 094822adf98def2b472a7e53e356c6dd 1169 SUPERFAMILY SSF82714 211 277 3.27E-11 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_05260 094822adf98def2b472a7e53e356c6dd 1169 PRINTS PR00702 Acriflavin resistance protein family signature 31 55 3.4E-24 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_05260 094822adf98def2b472a7e53e356c6dd 1169 PRINTS PR00702 Acriflavin resistance protein family signature 535 558 3.4E-24 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_05260 094822adf98def2b472a7e53e356c6dd 1169 PRINTS PR00702 Acriflavin resistance protein family signature 59 77 3.4E-24 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_05260 094822adf98def2b472a7e53e356c6dd 1169 PRINTS PR00702 Acriflavin resistance protein family signature 510 533 3.4E-24 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_05260 094822adf98def2b472a7e53e356c6dd 1169 SUPERFAMILY SSF82866 918 1140 6.8E-51 T 17-10-2018 BJD13_05260 094822adf98def2b472a7e53e356c6dd 1169 Gene3D G3DSA:3.30.2090.10 832 920 2.9E-139 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_05260 094822adf98def2b472a7e53e356c6dd 1169 Gene3D G3DSA:3.30.70.1320 344 396 4.7E-96 T 17-10-2018 BJD13_05260 094822adf98def2b472a7e53e356c6dd 1169 Gene3D G3DSA:3.30.2090.10 311 343 4.7E-96 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_05260 094822adf98def2b472a7e53e356c6dd 1169 SUPERFAMILY SSF82866 362 560 3.79E-44 T 17-10-2018 BJD13_05260 094822adf98def2b472a7e53e356c6dd 1169 Gene3D G3DSA:3.30.2090.10 207 277 3.1E-64 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_05260 094822adf98def2b472a7e53e356c6dd 1169 Gene3D G3DSA:3.30.70.1430 684 784 2.9E-139 T 17-10-2018 BJD13_05260 094822adf98def2b472a7e53e356c6dd 1169 SUPERFAMILY SSF82714 833 916 9.81E-13 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_05260 094822adf98def2b472a7e53e356c6dd 1169 Gene3D G3DSA:1.20.1640.10 31 60 3.1E-64 T 17-10-2018 BJD13_05260 094822adf98def2b472a7e53e356c6dd 1169 Gene3D G3DSA:3.30.70.1440 785 977 2.9E-139 T 17-10-2018 BJD13_05260 094822adf98def2b472a7e53e356c6dd 1169 Gene3D G3DSA:1.20.1640.10 577 589 4.7E-96 T 17-10-2018 BJD13_05260 094822adf98def2b472a7e53e356c6dd 1169 Gene3D G3DSA:1.20.1640.10 633 1134 2.9E-139 T 17-10-2018 BJD13_05260 094822adf98def2b472a7e53e356c6dd 1169 Gene3D G3DSA:1.20.1640.10 397 576 4.7E-96 T 17-10-2018 BJD13_23205 f18ac1f68ddfbafb452ab9dedc4cc97d 335 Gene3D G3DSA:3.30.565.10 194 333 2.5E-11 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_23205 f18ac1f68ddfbafb452ab9dedc4cc97d 335 SMART SM00091 12 79 1.8E-7 T 17-10-2018 IPR000014 PAS domain BJD13_23205 f18ac1f68ddfbafb452ab9dedc4cc97d 335 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 10 134 2.3E-14 T 17-10-2018 IPR000014 PAS domain BJD13_23205 f18ac1f68ddfbafb452ab9dedc4cc97d 335 SMART SM00911 140 222 1.4E-31 T 17-10-2018 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 BJD13_23205 f18ac1f68ddfbafb452ab9dedc4cc97d 335 SUPERFAMILY SSF55874 207 326 1.35E-6 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_23205 f18ac1f68ddfbafb452ab9dedc4cc97d 335 SUPERFAMILY SSF55785 10 125 2.62E-21 T 17-10-2018 IPR035965 PAS domain superfamily BJD13_23205 f18ac1f68ddfbafb452ab9dedc4cc97d 335 Pfam PF07536 HWE histidine kinase 140 221 2.5E-25 T 17-10-2018 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 BJD13_23205 f18ac1f68ddfbafb452ab9dedc4cc97d 335 Pfam PF08448 PAS fold 19 128 1.4E-15 T 17-10-2018 IPR013656 PAS fold-4 BJD13_23205 f18ac1f68ddfbafb452ab9dedc4cc97d 335 Gene3D G3DSA:3.30.450.20 2 136 6.1E-29 T 17-10-2018 BJD13_03530 44384b74b1e6cf8ef39bb29629e99ceb 792 Gene3D G3DSA:3.50.40.10 197 393 3.3E-71 T 17-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 BJD13_03530 44384b74b1e6cf8ef39bb29629e99ceb 792 SMART SM00896 698 791 3.9E-37 T 17-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 BJD13_03530 44384b74b1e6cf8ef39bb29629e99ceb 792 Gene3D G3DSA:3.30.70.380 699 792 1.8E-26 T 17-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 BJD13_03530 44384b74b1e6cf8ef39bb29629e99ceb 792 Gene3D G3DSA:3.30.930.10 487 690 2.1E-57 T 17-10-2018 BJD13_03530 44384b74b1e6cf8ef39bb29629e99ceb 792 SUPERFAMILY SSF50249 36 188 6.12E-43 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD13_03530 44384b74b1e6cf8ef39bb29629e99ceb 792 SMART SM00873 211 384 1.9E-85 T 17-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 BJD13_03530 44384b74b1e6cf8ef39bb29629e99ceb 792 Pfam PF03147 Ferredoxin-fold anticodon binding domain 698 791 2.6E-25 T 17-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 BJD13_03530 44384b74b1e6cf8ef39bb29629e99ceb 792 Gene3D G3DSA:2.40.50.140 39 153 1.1E-65 T 17-10-2018 BJD13_03530 44384b74b1e6cf8ef39bb29629e99ceb 792 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 791 1.5E-229 T 17-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 BJD13_03530 44384b74b1e6cf8ef39bb29629e99ceb 792 SUPERFAMILY SSF56037 195 392 1.02E-68 T 17-10-2018 BJD13_03530 44384b74b1e6cf8ef39bb29629e99ceb 792 SUPERFAMILY SSF55681 466 685 8.95E-49 T 17-10-2018 BJD13_03530 44384b74b1e6cf8ef39bb29629e99ceb 792 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 785 43.742 T 17-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 BJD13_03530 44384b74b1e6cf8ef39bb29629e99ceb 792 SUPERFAMILY SSF54991 694 791 6.67E-27 T 17-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 BJD13_03530 44384b74b1e6cf8ef39bb29629e99ceb 792 SUPERFAMILY SSF46955 402 474 4.39E-18 T 17-10-2018 IPR009061 Putative DNA-binding domain superfamily BJD13_03530 44384b74b1e6cf8ef39bb29629e99ceb 792 Pfam PF01588 Putative tRNA binding domain 45 144 2.0E-24 T 17-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 BJD13_03530 44384b74b1e6cf8ef39bb29629e99ceb 792 Gene3D G3DSA:3.30.56.10 402 475 9.0E-25 T 17-10-2018 BJD13_03530 44384b74b1e6cf8ef39bb29629e99ceb 792 Pfam PF03483 B3/4 domain 212 384 3.7E-64 T 17-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 BJD13_03530 44384b74b1e6cf8ef39bb29629e99ceb 792 Gene3D G3DSA:3.30.56.10 4 180 1.1E-65 T 17-10-2018 BJD13_03530 44384b74b1e6cf8ef39bb29629e99ceb 792 SMART SM00874 402 470 9.6E-28 T 17-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 BJD13_03530 44384b74b1e6cf8ef39bb29629e99ceb 792 Pfam PF03484 tRNA synthetase B5 domain 405 470 3.4E-17 T 17-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 BJD13_08850 4745cc82e634dc2499bbf8457ee89220 391 Pfam PF00356 Bacterial regulatory proteins, lacI family 39 84 1.4E-11 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD13_08850 4745cc82e634dc2499bbf8457ee89220 391 SMART SM00354 37 107 4.0E-18 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD13_08850 4745cc82e634dc2499bbf8457ee89220 391 Gene3D G3DSA:3.40.50.2300 197 324 1.3E-66 T 17-10-2018 BJD13_08850 4745cc82e634dc2499bbf8457ee89220 391 Gene3D G3DSA:1.10.260.40 32 94 2.3E-16 T 17-10-2018 BJD13_08850 4745cc82e634dc2499bbf8457ee89220 391 SUPERFAMILY SSF47413 37 95 4.64E-14 T 17-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BJD13_08850 4745cc82e634dc2499bbf8457ee89220 391 Pfam PF13377 Periplasmic binding protein-like domain 206 364 1.0E-32 T 17-10-2018 BJD13_08850 4745cc82e634dc2499bbf8457ee89220 391 SUPERFAMILY SSF53822 95 351 1.39E-59 T 17-10-2018 IPR028082 Periplasmic binding protein-like I BJD13_08850 4745cc82e634dc2499bbf8457ee89220 391 Gene3D G3DSA:3.40.50.2300 98 342 1.3E-66 T 17-10-2018 BJD13_02730 d227ecb393d11f3b7508cd339fad5988 342 SUPERFAMILY SSF52540 2 209 7.77E-42 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_02730 d227ecb393d11f3b7508cd339fad5988 342 Gene3D G3DSA:1.10.8.60 143 211 8.4E-25 T 17-10-2018 BJD13_02730 d227ecb393d11f3b7508cd339fad5988 342 Gene3D G3DSA:1.20.272.10 213 340 4.5E-21 T 17-10-2018 BJD13_02730 d227ecb393d11f3b7508cd339fad5988 342 Gene3D G3DSA:3.40.50.300 1 137 4.2E-39 T 17-10-2018 BJD13_02730 d227ecb393d11f3b7508cd339fad5988 342 SUPERFAMILY SSF48019 211 333 1.31E-20 T 17-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 BJD13_02730 d227ecb393d11f3b7508cd339fad5988 342 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 16 332 1.9E-96 T 17-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 BJD13_02730 d227ecb393d11f3b7508cd339fad5988 342 Pfam PF06144 DNA polymerase III, delta subunit 20 189 6.1E-21 T 17-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 BJD13_11890 32a9c644bd2c93986aaacdff99dfe61d 244 SMART SM00322 60 125 4.7E-10 T 17-10-2018 IPR004087 K Homology domain GO:0003676 BJD13_11890 32a9c644bd2c93986aaacdff99dfe61d 244 SUPERFAMILY SSF54821 108 206 1.83E-40 T 17-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_11890 32a9c644bd2c93986aaacdff99dfe61d 244 SUPERFAMILY SSF54814 2 106 2.04E-37 T 17-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 BJD13_11890 32a9c644bd2c93986aaacdff99dfe61d 244 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 38.972 T 17-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 BJD13_11890 32a9c644bd2c93986aaacdff99dfe61d 244 Gene3D G3DSA:3.30.300.20 17 107 1.8E-29 T 17-10-2018 IPR015946 K homology domain-like, alpha/beta BJD13_11890 32a9c644bd2c93986aaacdff99dfe61d 244 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 208 1.6E-95 T 17-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 BJD13_11890 32a9c644bd2c93986aaacdff99dfe61d 244 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 5.2E-40 T 17-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_11890 32a9c644bd2c93986aaacdff99dfe61d 244 Gene3D G3DSA:3.30.1140.32 108 208 3.6E-44 T 17-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_11890 32a9c644bd2c93986aaacdff99dfe61d 244 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 17-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_11890 32a9c644bd2c93986aaacdff99dfe61d 244 Pfam PF07650 KH domain 38 111 5.8E-20 T 17-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_23770 365800981fe7890e91751c79964eeea8 1181 Pfam PF00512 His Kinase A (phospho-acceptor) domain 810 875 1.1E-16 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_23770 365800981fe7890e91751c79964eeea8 1181 SMART SM00387 922 1036 5.8E-36 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_23770 365800981fe7890e91751c79964eeea8 1181 Pfam PF07495 Y_Y_Y domain 694 755 5.5E-15 T 17-10-2018 IPR011123 Two component regulator three Y BJD13_23770 365800981fe7890e91751c79964eeea8 1181 SUPERFAMILY SSF63829 31 233 1.66E-23 T 17-10-2018 BJD13_23770 365800981fe7890e91751c79964eeea8 1181 Gene3D G3DSA:2.60.40.10 647 762 4.7E-18 T 17-10-2018 IPR013783 Immunoglobulin-like fold BJD13_23770 365800981fe7890e91751c79964eeea8 1181 SUPERFAMILY SSF63829 410 618 2.22E-25 T 17-10-2018 BJD13_23770 365800981fe7890e91751c79964eeea8 1181 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 922 1034 1.5E-26 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_23770 365800981fe7890e91751c79964eeea8 1181 SMART SM00448 1057 1168 1.9E-29 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_23770 365800981fe7890e91751c79964eeea8 1181 Pfam PF00072 Response regulator receiver domain 1059 1168 3.8E-20 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_23770 365800981fe7890e91751c79964eeea8 1181 SUPERFAMILY SSF63829 305 478 1.83E-7 T 17-10-2018 BJD13_23770 365800981fe7890e91751c79964eeea8 1181 Gene3D G3DSA:2.130.10.10 74 237 7.9E-26 T 17-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BJD13_23770 365800981fe7890e91751c79964eeea8 1181 SMART SM00388 810 875 2.1E-21 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_23770 365800981fe7890e91751c79964eeea8 1181 Gene3D G3DSA:3.30.565.10 874 1038 6.1E-45 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_23770 365800981fe7890e91751c79964eeea8 1181 Gene3D G3DSA:2.130.10.10 19 73 1.8E-8 T 17-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BJD13_23770 365800981fe7890e91751c79964eeea8 1181 Gene3D G3DSA:2.130.10.10 444 645 4.4E-24 T 17-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BJD13_23770 365800981fe7890e91751c79964eeea8 1181 SUPERFAMILY SSF52172 1056 1179 1.25E-32 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_23770 365800981fe7890e91751c79964eeea8 1181 SUPERFAMILY SSF47384 800 876 1.65E-17 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD13_23770 365800981fe7890e91751c79964eeea8 1181 SUPERFAMILY SSF55874 864 1035 2.75E-44 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_23770 365800981fe7890e91751c79964eeea8 1181 Gene3D G3DSA:3.40.50.2300 1054 1181 9.3E-31 T 17-10-2018 BJD13_23770 365800981fe7890e91751c79964eeea8 1181 PRINTS PR00344 Bacterial sensor protein C-terminal signature 960 974 8.9E-15 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_23770 365800981fe7890e91751c79964eeea8 1181 PRINTS PR00344 Bacterial sensor protein C-terminal signature 996 1014 8.9E-15 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_23770 365800981fe7890e91751c79964eeea8 1181 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1020 1033 8.9E-15 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_23770 365800981fe7890e91751c79964eeea8 1181 PRINTS PR00344 Bacterial sensor protein C-terminal signature 978 988 8.9E-15 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_23770 365800981fe7890e91751c79964eeea8 1181 Gene3D G3DSA:2.130.10.10 250 434 1.9E-18 T 17-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BJD13_23770 365800981fe7890e91751c79964eeea8 1181 Pfam PF07494 Two component regulator propeller 31 53 0.0029 T 17-10-2018 IPR011110 Two component regulator propeller BJD13_23770 365800981fe7890e91751c79964eeea8 1181 Pfam PF07494 Two component regulator propeller 165 188 0.0094 T 17-10-2018 IPR011110 Two component regulator propeller BJD13_23770 365800981fe7890e91751c79964eeea8 1181 Gene3D G3DSA:1.10.287.130 784 873 2.8E-22 T 17-10-2018 BJD13_07765 7622a417296a0e37a837b6ca4d0e973c 382 Gene3D G3DSA:3.20.20.120 102 344 6.3E-141 T 17-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily BJD13_07765 7622a417296a0e37a837b6ca4d0e973c 382 SMART SM00922 125 230 1.4E-17 T 17-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal BJD13_07765 7622a417296a0e37a837b6ca4d0e973c 382 Pfam PF13378 Enolase C-terminal domain-like 130 355 8.0E-55 T 17-10-2018 IPR029065 Enolase C-terminal domain-like BJD13_07765 7622a417296a0e37a837b6ca4d0e973c 382 Hamap MF_01289 D-galactonate dehydratase [dgoD]. 1 382 70.376 T 17-10-2018 IPR023592 D-galactonate dehydratase GO:0008869|GO:0034194 KEGG: 00052+4.2.1.6 BJD13_07765 7622a417296a0e37a837b6ca4d0e973c 382 Gene3D G3DSA:3.30.390.10 12 374 6.3E-141 T 17-10-2018 IPR029017 Enolase-like, N-terminal BJD13_07765 7622a417296a0e37a837b6ca4d0e973c 382 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 7 107 1.7E-28 T 17-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain BJD13_07765 7622a417296a0e37a837b6ca4d0e973c 382 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 180 211 - T 17-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 BJD13_07765 7622a417296a0e37a837b6ca4d0e973c 382 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 82 107 - T 17-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 BJD13_07765 7622a417296a0e37a837b6ca4d0e973c 382 SUPERFAMILY SSF54826 1 112 2.19E-31 T 17-10-2018 BJD13_07765 7622a417296a0e37a837b6ca4d0e973c 382 SUPERFAMILY SSF51604 95 359 1.23E-71 T 17-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily BJD13_02985 14526fe2d49fb6fd58c1506e0373a651 501 Gene3D G3DSA:3.40.50.300 206 382 4.2E-20 T 17-10-2018 BJD13_02985 14526fe2d49fb6fd58c1506e0373a651 501 SUPERFAMILY SSF52540 4 384 3.29E-55 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_02985 14526fe2d49fb6fd58c1506e0373a651 501 Gene3D G3DSA:3.40.50.300 9 89 4.2E-8 T 17-10-2018 BJD13_02985 14526fe2d49fb6fd58c1506e0373a651 501 Pfam PF05872 Bacterial protein of unknown function (DUF853) 13 501 1.7E-214 T 17-10-2018 IPR033186 Helicase HerA-like C-terminal BJD13_06680 bb54015c4a88018af02ebb82e9ea6396 255 Gene3D G3DSA:1.20.140.160 95 243 1.0E-43 T 17-10-2018 BJD13_06680 bb54015c4a88018af02ebb82e9ea6396 255 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 211 237 - T 17-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BJD13_06680 bb54015c4a88018af02ebb82e9ea6396 255 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 25 242 2.4E-80 T 17-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 BJD13_06680 bb54015c4a88018af02ebb82e9ea6396 255 SUPERFAMILY SSF88659 97 163 3.18E-11 T 17-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BJD13_06680 bb54015c4a88018af02ebb82e9ea6396 255 Pfam PF04545 Sigma-70, region 4 190 238 1.3E-17 T 17-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 BJD13_06680 bb54015c4a88018af02ebb82e9ea6396 255 SUPERFAMILY SSF88659 170 241 2.06E-19 T 17-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BJD13_06680 bb54015c4a88018af02ebb82e9ea6396 255 Gene3D G3DSA:1.10.1740.10 9 93 8.4E-30 T 17-10-2018 BJD13_06680 bb54015c4a88018af02ebb82e9ea6396 255 Pfam PF04539 Sigma-70 region 3 107 177 9.2E-13 T 17-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 BJD13_06680 bb54015c4a88018af02ebb82e9ea6396 255 PRINTS PR00046 Major sigma-70 factor signature 226 237 2.4E-11 T 17-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BJD13_06680 bb54015c4a88018af02ebb82e9ea6396 255 PRINTS PR00046 Major sigma-70 factor signature 211 226 2.4E-11 T 17-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BJD13_06680 bb54015c4a88018af02ebb82e9ea6396 255 PRINTS PR00046 Major sigma-70 factor signature 51 64 2.4E-11 T 17-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BJD13_06680 bb54015c4a88018af02ebb82e9ea6396 255 PRINTS PR00046 Major sigma-70 factor signature 194 206 2.4E-11 T 17-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BJD13_06680 bb54015c4a88018af02ebb82e9ea6396 255 PIRSF PIRSF000770 1 246 5.4E-40 T 17-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BJD13_06680 bb54015c4a88018af02ebb82e9ea6396 255 SUPERFAMILY SSF88946 20 96 2.88E-24 T 17-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BJD13_06680 bb54015c4a88018af02ebb82e9ea6396 255 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 240 2.7E-33 T 17-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BJD13_06680 bb54015c4a88018af02ebb82e9ea6396 255 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 10 244 64.846 T 17-10-2018 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 BJD13_06680 bb54015c4a88018af02ebb82e9ea6396 255 Pfam PF04542 Sigma-70 region 2 25 96 3.0E-17 T 17-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BJD13_19935 67655767822fc8bc4014b58247a0be73 436 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 43 434 7.9E-98 T 17-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 BJD13_19935 67655767822fc8bc4014b58247a0be73 436 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 319 331 5.2E-27 T 17-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase BJD13_19935 67655767822fc8bc4014b58247a0be73 436 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 222 236 5.2E-27 T 17-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase BJD13_19935 67655767822fc8bc4014b58247a0be73 436 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 251 261 5.2E-27 T 17-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase BJD13_19935 67655767822fc8bc4014b58247a0be73 436 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 369 385 5.2E-27 T 17-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase BJD13_19935 67655767822fc8bc4014b58247a0be73 436 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 417 434 5.2E-27 T 17-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase BJD13_19935 67655767822fc8bc4014b58247a0be73 436 Gene3D G3DSA:3.30.70.1170 173 230 6.8E-22 T 17-10-2018 BJD13_19935 67655767822fc8bc4014b58247a0be73 436 Gene3D G3DSA:1.10.940.10 9 143 5.4E-30 T 17-10-2018 IPR035926 NusB-like superfamily BJD13_19935 67655767822fc8bc4014b58247a0be73 436 SUPERFAMILY SSF48013 12 148 2.94E-25 T 17-10-2018 IPR035926 NusB-like superfamily BJD13_19935 67655767822fc8bc4014b58247a0be73 436 SUPERFAMILY SSF53335 144 434 2.63E-64 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_19935 67655767822fc8bc4014b58247a0be73 436 Pfam PF01189 16S rRNA methyltransferase RsmB/F 241 432 6.6E-52 T 17-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 BJD13_19935 67655767822fc8bc4014b58247a0be73 436 Pfam PF01029 NusB family 12 133 5.2E-18 T 17-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 BJD13_19935 67655767822fc8bc4014b58247a0be73 436 Gene3D G3DSA:3.40.50.150 231 435 1.5E-57 T 17-10-2018 BJD13_19935 67655767822fc8bc4014b58247a0be73 436 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 318 329 - T 17-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 BJD13_15445 beb347a353942aced063dec64236a20a 295 SUPERFAMILY SSF46785 1 110 8.17E-25 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_15445 beb347a353942aced063dec64236a20a 295 Gene3D G3DSA:3.40.190.10 164 269 9.2E-61 T 17-10-2018 BJD13_15445 beb347a353942aced063dec64236a20a 295 SUPERFAMILY SSF53850 88 291 5.7E-37 T 17-10-2018 BJD13_15445 beb347a353942aced063dec64236a20a 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.3E-9 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_15445 beb347a353942aced063dec64236a20a 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.3E-9 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_15445 beb347a353942aced063dec64236a20a 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.3E-9 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_15445 beb347a353942aced063dec64236a20a 295 Gene3D G3DSA:1.10.10.10 1 90 5.8E-32 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_15445 beb347a353942aced063dec64236a20a 295 Pfam PF03466 LysR substrate binding domain 87 292 1.2E-42 T 17-10-2018 IPR005119 LysR, substrate-binding BJD13_15445 beb347a353942aced063dec64236a20a 295 Gene3D G3DSA:3.40.190.10 91 276 9.2E-61 T 17-10-2018 BJD13_15445 beb347a353942aced063dec64236a20a 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.1E-24 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_19165 19729a49b61c5ec700e566f762ca2742 478 Pfam PF13365 Trypsin-like peptidase domain 111 246 3.3E-32 T 17-10-2018 BJD13_19165 19729a49b61c5ec700e566f762ca2742 478 SUPERFAMILY SSF50156 287 381 2.1E-20 T 17-10-2018 IPR036034 PDZ superfamily GO:0005515 BJD13_19165 19729a49b61c5ec700e566f762ca2742 478 SUPERFAMILY SSF50494 59 284 5.48E-63 T 17-10-2018 IPR009003 Peptidase S1, PA clan BJD13_19165 19729a49b61c5ec700e566f762ca2742 478 SUPERFAMILY SSF50156 397 474 3.29E-8 T 17-10-2018 IPR036034 PDZ superfamily GO:0005515 BJD13_19165 19729a49b61c5ec700e566f762ca2742 478 Gene3D G3DSA:2.30.42.10 283 388 1.7E-23 T 17-10-2018 BJD13_19165 19729a49b61c5ec700e566f762ca2742 478 Gene3D G3DSA:2.30.42.10 398 478 1.1E-10 T 17-10-2018 BJD13_19165 19729a49b61c5ec700e566f762ca2742 478 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 61 473 9.4E-127 T 17-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 BJD13_19165 19729a49b61c5ec700e566f762ca2742 478 Gene3D G3DSA:2.40.10.120 59 281 8.5E-79 T 17-10-2018 BJD13_19165 19729a49b61c5ec700e566f762ca2742 478 Pfam PF13180 PDZ domain 290 379 2.8E-12 T 17-10-2018 IPR001478 PDZ domain GO:0005515 BJD13_19165 19729a49b61c5ec700e566f762ca2742 478 SMART SM00228 288 370 5.7E-13 T 17-10-2018 IPR001478 PDZ domain GO:0005515 BJD13_19165 19729a49b61c5ec700e566f762ca2742 478 SMART SM00228 394 470 0.33 T 17-10-2018 IPR001478 PDZ domain GO:0005515 BJD13_19165 19729a49b61c5ec700e566f762ca2742 478 PRINTS PR00834 HtrA/DegQ protease family signature 328 340 5.1E-52 T 17-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BJD13_19165 19729a49b61c5ec700e566f762ca2742 478 PRINTS PR00834 HtrA/DegQ protease family signature 239 256 5.1E-52 T 17-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BJD13_19165 19729a49b61c5ec700e566f762ca2742 478 PRINTS PR00834 HtrA/DegQ protease family signature 142 162 5.1E-52 T 17-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BJD13_19165 19729a49b61c5ec700e566f762ca2742 478 PRINTS PR00834 HtrA/DegQ protease family signature 217 234 5.1E-52 T 17-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BJD13_19165 19729a49b61c5ec700e566f762ca2742 478 PRINTS PR00834 HtrA/DegQ protease family signature 182 206 5.1E-52 T 17-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BJD13_19165 19729a49b61c5ec700e566f762ca2742 478 PRINTS PR00834 HtrA/DegQ protease family signature 121 133 5.1E-52 T 17-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BJD13_09480 4c0eeb97f909f2f037f55b65d1dd382f 252 SUPERFAMILY SSF64005 9 232 1.57E-82 T 17-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 BJD13_09480 4c0eeb97f909f2f037f55b65d1dd382f 252 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 9 236 4.4E-85 T 17-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 BJD13_09480 4c0eeb97f909f2f037f55b65d1dd382f 252 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 182 199 - T 17-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 BJD13_09480 4c0eeb97f909f2f037f55b65d1dd382f 252 Pfam PF01255 Putative undecaprenyl diphosphate synthase 16 236 1.0E-75 T 17-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 BJD13_09480 4c0eeb97f909f2f037f55b65d1dd382f 252 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 9 237 39.595 T 17-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 BJD13_09480 4c0eeb97f909f2f037f55b65d1dd382f 252 Gene3D G3DSA:3.40.1180.10 2 237 1.9E-90 T 17-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 BJD13_07880 5a422c16e52a97546d2c857594b5702a 70 Pfam PF02599 Global regulator protein family 1 52 4.7E-27 T 17-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 BJD13_07880 5a422c16e52a97546d2c857594b5702a 70 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 55 1.4E-27 T 17-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 BJD13_07880 5a422c16e52a97546d2c857594b5702a 70 SUPERFAMILY SSF117130 1 53 8.89E-21 T 17-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 BJD13_07880 5a422c16e52a97546d2c857594b5702a 70 Gene3D G3DSA:3.30.70.1680 1 58 4.8E-29 T 17-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 BJD13_07880 5a422c16e52a97546d2c857594b5702a 70 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 61 17.28 T 17-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 BJD13_07880 5a422c16e52a97546d2c857594b5702a 70 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 3.0E-20 T 17-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 BJD13_09125 36f9c0a9772088cd2e91e63942132315 1058 Gene3D G3DSA:1.20.1640.10 10 522 0.0 T 17-10-2018 BJD13_09125 36f9c0a9772088cd2e91e63942132315 1058 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 3 1051 0.0 T 17-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 BJD13_09125 36f9c0a9772088cd2e91e63942132315 1058 SUPERFAMILY SSF82866 299 499 3.4E-51 T 17-10-2018 BJD13_09125 36f9c0a9772088cd2e91e63942132315 1058 SUPERFAMILY SSF82714 185 275 3.79E-22 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_09125 36f9c0a9772088cd2e91e63942132315 1058 SUPERFAMILY SSF82693 575 678 1.57E-24 T 17-10-2018 BJD13_09125 36f9c0a9772088cd2e91e63942132315 1058 Gene3D G3DSA:3.30.2090.10 728 816 0.0 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_09125 36f9c0a9772088cd2e91e63942132315 1058 SUPERFAMILY SSF82866 813 1038 3.53E-44 T 17-10-2018 BJD13_09125 36f9c0a9772088cd2e91e63942132315 1058 SUPERFAMILY SSF82714 729 815 2.75E-19 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_09125 36f9c0a9772088cd2e91e63942132315 1058 Gene3D G3DSA:3.30.2090.10 181 278 0.0 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_09125 36f9c0a9772088cd2e91e63942132315 1058 SUPERFAMILY SSF82693 139 333 1.26E-26 T 17-10-2018 BJD13_09125 36f9c0a9772088cd2e91e63942132315 1058 Pfam PF00873 AcrB/AcrD/AcrF family 3 1034 0.0 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_09125 36f9c0a9772088cd2e91e63942132315 1058 Gene3D G3DSA:3.30.70.1430 40 824 0.0 T 17-10-2018 BJD13_09125 36f9c0a9772088cd2e91e63942132315 1058 Gene3D G3DSA:3.30.70.1320 135 335 0.0 T 17-10-2018 BJD13_09125 36f9c0a9772088cd2e91e63942132315 1058 Gene3D G3DSA:3.30.70.1430 577 675 0.0 T 17-10-2018 BJD13_09125 36f9c0a9772088cd2e91e63942132315 1058 SUPERFAMILY SSF82693 41 134 2.96E-28 T 17-10-2018 BJD13_09125 36f9c0a9772088cd2e91e63942132315 1058 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 2.6E-92 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_09125 36f9c0a9772088cd2e91e63942132315 1058 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.6E-92 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_09125 36f9c0a9772088cd2e91e63942132315 1058 PRINTS PR00702 Acriflavin resistance protein family signature 631 645 2.6E-92 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_09125 36f9c0a9772088cd2e91e63942132315 1058 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 2.6E-92 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_09125 36f9c0a9772088cd2e91e63942132315 1058 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.6E-92 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_09125 36f9c0a9772088cd2e91e63942132315 1058 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 2.6E-92 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_09125 36f9c0a9772088cd2e91e63942132315 1058 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 2.6E-92 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_09125 36f9c0a9772088cd2e91e63942132315 1058 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 2.6E-92 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_09125 36f9c0a9772088cd2e91e63942132315 1058 PRINTS PR00702 Acriflavin resistance protein family signature 562 579 2.6E-92 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_09125 36f9c0a9772088cd2e91e63942132315 1058 Gene3D G3DSA:3.30.70.1440 676 874 0.0 T 17-10-2018 BJD13_09125 36f9c0a9772088cd2e91e63942132315 1058 Gene3D G3DSA:1.20.1640.10 523 1031 0.0 T 17-10-2018 BJD13_02020 4be156fe86c7372c8fe77a8901a14768 345 Gene3D G3DSA:3.30.450.90 1 100 6.2E-36 T 17-10-2018 BJD13_02020 4be156fe86c7372c8fe77a8901a14768 345 SMART SM00382 122 248 0.0063 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_02020 4be156fe86c7372c8fe77a8901a14768 345 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 341 6.5E-158 T 17-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 BJD13_02020 4be156fe86c7372c8fe77a8901a14768 345 Gene3D G3DSA:3.40.50.300 101 345 2.4E-105 T 17-10-2018 BJD13_02020 4be156fe86c7372c8fe77a8901a14768 345 SUPERFAMILY SSF52540 5 336 7.19E-72 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_02020 4be156fe86c7372c8fe77a8901a14768 345 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 17-10-2018 IPR001482 Type II/IV secretion system protein BJD13_02020 4be156fe86c7372c8fe77a8901a14768 345 Pfam PF00437 Type II/IV secretion system protein 12 269 3.3E-46 T 17-10-2018 IPR001482 Type II/IV secretion system protein BJD13_14765 98968e3173568d2fb5d2fdd2566e86d8 743 PIRSF PIRSF000463 25 743 1.1E-270 T 17-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 BJD13_14765 98968e3173568d2fb5d2fdd2566e86d8 743 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 117 742 42.588 T 17-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 BJD13_14765 98968e3173568d2fb5d2fdd2566e86d8 743 SUPERFAMILY SSF51445 195 634 1.97E-109 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily BJD13_14765 98968e3173568d2fb5d2fdd2566e86d8 743 Gene3D G3DSA:3.20.20.80 252 627 8.1E-156 T 17-10-2018 BJD13_14765 98968e3173568d2fb5d2fdd2566e86d8 743 SMART SM00642 265 610 8.9E-7 T 17-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BJD13_14765 98968e3173568d2fb5d2fdd2566e86d8 743 SUPERFAMILY SSF81296 38 125 1.01E-9 T 17-10-2018 IPR014756 Immunoglobulin E-set BJD13_14765 98968e3173568d2fb5d2fdd2566e86d8 743 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 643 741 1.4E-23 T 17-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 BJD13_14765 98968e3173568d2fb5d2fdd2566e86d8 743 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 141 222 2.0E-21 T 17-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 BJD13_14765 98968e3173568d2fb5d2fdd2566e86d8 743 Gene3D G3DSA:2.60.40.10 21 236 5.4E-55 T 17-10-2018 IPR013783 Immunoglobulin-like fold BJD13_14765 98968e3173568d2fb5d2fdd2566e86d8 743 Gene3D G3DSA:2.60.40.1180 638 743 7.3E-36 T 17-10-2018 IPR013780 Glycosyl hydrolase, all-beta BJD13_14765 98968e3173568d2fb5d2fdd2566e86d8 743 Pfam PF00128 Alpha amylase, catalytic domain 290 363 1.3E-5 T 17-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BJD13_14765 98968e3173568d2fb5d2fdd2566e86d8 743 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 132 739 1.3E-259 T 17-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 BJD13_14765 98968e3173568d2fb5d2fdd2566e86d8 743 SUPERFAMILY SSF51011 639 742 9.59E-33 T 17-10-2018 BJD13_00105 a9b9c385c7a45b0461235000214fa540 617 TIGRFAM TIGR03743 SXT_TraD: conjugative coupling factor TraD, SXT/TOL subfamily 10 606 1.9E-186 T 17-10-2018 IPR022458 Conjugative coupling factor TraG/TraD BJD13_00105 a9b9c385c7a45b0461235000214fa540 617 Pfam PF10412 Type IV secretion-system coupling protein DNA-binding domain 152 298 1.5E-9 T 17-10-2018 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain BJD13_00105 a9b9c385c7a45b0461235000214fa540 617 Pfam PF12696 TraM recognition site of TraD and TraG 458 584 1.1E-11 T 17-10-2018 IPR032689 TraD/TraG, TraM recognition site BJD13_00105 a9b9c385c7a45b0461235000214fa540 617 Gene3D G3DSA:3.40.50.300 100 273 4.3E-13 T 17-10-2018 BJD13_00105 a9b9c385c7a45b0461235000214fa540 617 Gene3D G3DSA:3.40.50.300 390 610 1.1E-26 T 17-10-2018 BJD13_00105 a9b9c385c7a45b0461235000214fa540 617 SUPERFAMILY SSF52540 121 606 8.36E-51 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_05140 c964ce9ba6b692cc513f249650418573 792 Gene3D G3DSA:3.20.20.60 478 790 1.6E-101 T 17-10-2018 BJD13_05140 c964ce9ba6b692cc513f249650418573 792 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 18 344 4.3E-111 T 17-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 BJD13_05140 c964ce9ba6b692cc513f249650418573 792 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 414 425 - T 17-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 BJD13_05140 c964ce9ba6b692cc513f249650418573 792 SUPERFAMILY SSF52009 350 464 1.16E-32 T 17-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 BJD13_05140 c964ce9ba6b692cc513f249650418573 792 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 5 789 0.0 T 17-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 BJD13_05140 c964ce9ba6b692cc513f249650418573 792 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 694 712 - T 17-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 BJD13_05140 c964ce9ba6b692cc513f249650418573 792 SUPERFAMILY SSF51621 461 789 4.97E-96 T 17-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 BJD13_05140 c964ce9ba6b692cc513f249650418573 792 PIRSF PIRSF000854 1 792 0.0 T 17-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 BJD13_05140 c964ce9ba6b692cc513f249650418573 792 Pfam PF00391 PEP-utilising enzyme, mobile domain 384 455 1.1E-24 T 17-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 BJD13_05140 c964ce9ba6b692cc513f249650418573 792 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 711 726 2.9E-6 T 17-10-2018 BJD13_05140 c964ce9ba6b692cc513f249650418573 792 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 694 709 2.9E-6 T 17-10-2018 BJD13_05140 c964ce9ba6b692cc513f249650418573 792 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 747 759 2.9E-6 T 17-10-2018 BJD13_05140 c964ce9ba6b692cc513f249650418573 792 Gene3D G3DSA:3.30.1490.20 2 194 4.1E-69 T 17-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BJD13_05140 c964ce9ba6b692cc513f249650418573 792 Gene3D G3DSA:3.30.470.20 195 356 4.6E-54 T 17-10-2018 BJD13_05140 c964ce9ba6b692cc513f249650418573 792 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 482 788 5.2E-61 T 17-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 BJD13_05140 c964ce9ba6b692cc513f249650418573 792 Gene3D G3DSA:3.50.30.10 371 477 2.5E-40 T 17-10-2018 BJD13_05140 c964ce9ba6b692cc513f249650418573 792 SUPERFAMILY SSF56059 3 384 6.24E-102 T 17-10-2018 BJD13_12630 157097b6b2b1441da62fa3230614704b 332 Gene3D G3DSA:1.10.1200.80 254 323 2.3E-8 T 17-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 BJD13_12630 157097b6b2b1441da62fa3230614704b 332 PIRSF PIRSF006621 1 325 2.0E-110 T 17-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 BJD13_12630 157097b6b2b1441da62fa3230614704b 332 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 318 2.5E-120 T 17-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 BJD13_12630 157097b6b2b1441da62fa3230614704b 332 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 321 49.796 T 17-10-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 BJD13_12630 157097b6b2b1441da62fa3230614704b 332 SUPERFAMILY SSF51395 10 318 1.17E-90 T 17-10-2018 BJD13_12630 157097b6b2b1441da62fa3230614704b 332 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 17-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 BJD13_12630 157097b6b2b1441da62fa3230614704b 332 Pfam PF01207 Dihydrouridine synthase (Dus) 13 316 8.9E-105 T 17-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 BJD13_12630 157097b6b2b1441da62fa3230614704b 332 Gene3D G3DSA:3.20.20.70 7 248 5.6E-78 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD13_06015 58a5ffc3351ae40e70dcf02b23e82aba 911 Gene3D G3DSA:3.40.50.200 69 370 9.9E-48 T 17-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BJD13_06015 58a5ffc3351ae40e70dcf02b23e82aba 911 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 399 429 2.1E-11 T 17-10-2018 IPR013425 Autotransporter-associated beta strand repeat BJD13_06015 58a5ffc3351ae40e70dcf02b23e82aba 911 Pfam PF00082 Subtilase family 89 360 1.8E-38 T 17-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 BJD13_06015 58a5ffc3351ae40e70dcf02b23e82aba 911 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 458 911 8.7E-6 T 17-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 BJD13_06015 58a5ffc3351ae40e70dcf02b23e82aba 911 Pfam PF03797 Autotransporter beta-domain 646 889 7.6E-28 T 17-10-2018 IPR005546 Autotransporter beta-domain BJD13_06015 58a5ffc3351ae40e70dcf02b23e82aba 911 Pfam PF12951 Passenger-associated-transport-repeat 400 429 3.6E-10 T 17-10-2018 IPR013425 Autotransporter-associated beta strand repeat BJD13_06015 58a5ffc3351ae40e70dcf02b23e82aba 911 PRINTS PR00723 Subtilisin serine protease family (S8) signature 89 108 1.0E-5 T 17-10-2018 IPR015500 Peptidase S8, subtilisin-related BJD13_06015 58a5ffc3351ae40e70dcf02b23e82aba 911 PRINTS PR00723 Subtilisin serine protease family (S8) signature 309 325 1.0E-5 T 17-10-2018 IPR015500 Peptidase S8, subtilisin-related BJD13_06015 58a5ffc3351ae40e70dcf02b23e82aba 911 PRINTS PR00723 Subtilisin serine protease family (S8) signature 131 144 1.0E-5 T 17-10-2018 IPR015500 Peptidase S8, subtilisin-related BJD13_06015 58a5ffc3351ae40e70dcf02b23e82aba 911 Gene3D G3DSA:2.40.128.130 625 911 7.5E-39 T 17-10-2018 IPR036709 Autotransporter beta-domain superfamily BJD13_06015 58a5ffc3351ae40e70dcf02b23e82aba 911 SUPERFAMILY SSF103515 638 911 1.02E-34 T 17-10-2018 IPR036709 Autotransporter beta-domain superfamily BJD13_06015 58a5ffc3351ae40e70dcf02b23e82aba 911 SUPERFAMILY SSF52743 77 373 5.63E-48 T 17-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BJD13_06015 58a5ffc3351ae40e70dcf02b23e82aba 911 SMART SM00869 642 900 1.5E-27 T 17-10-2018 IPR005546 Autotransporter beta-domain BJD13_21340 9ebbfcfd37dc7dc94cfad76569025fd0 973 Gene3D G3DSA:3.90.740.10 262 332 7.7E-9 T 17-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 BJD13_21340 9ebbfcfd37dc7dc94cfad76569025fd0 973 PRINTS PR00986 Valyl-tRNA synthetase signature 36 47 1.4E-26 T 17-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 BJD13_21340 9ebbfcfd37dc7dc94cfad76569025fd0 973 PRINTS PR00986 Valyl-tRNA synthetase signature 396 409 1.4E-26 T 17-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 BJD13_21340 9ebbfcfd37dc7dc94cfad76569025fd0 973 PRINTS PR00986 Valyl-tRNA synthetase signature 496 517 1.4E-26 T 17-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 BJD13_21340 9ebbfcfd37dc7dc94cfad76569025fd0 973 PRINTS PR00986 Valyl-tRNA synthetase signature 531 549 1.4E-26 T 17-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 BJD13_21340 9ebbfcfd37dc7dc94cfad76569025fd0 973 SUPERFAMILY SSF50677 194 392 1.83E-51 T 17-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 BJD13_21340 9ebbfcfd37dc7dc94cfad76569025fd0 973 SUPERFAMILY SSF46589 909 973 4.5E-16 T 17-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 BJD13_21340 9ebbfcfd37dc7dc94cfad76569025fd0 973 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 17 656 6.6E-193 T 17-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD13_21340 9ebbfcfd37dc7dc94cfad76569025fd0 973 Gene3D G3DSA:3.40.50.620 5 202 1.1E-59 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD13_21340 9ebbfcfd37dc7dc94cfad76569025fd0 973 TIGRFAM TIGR00422 valS: valine--tRNA ligase 6 956 0.0 T 17-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 BJD13_21340 9ebbfcfd37dc7dc94cfad76569025fd0 973 Gene3D G3DSA:1.10.287.380 902 973 3.4E-19 T 17-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 BJD13_21340 9ebbfcfd37dc7dc94cfad76569025fd0 973 Hamap MF_02004 Valine--tRNA ligase [valS]. 4 973 15.467 T 17-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 BJD13_21340 9ebbfcfd37dc7dc94cfad76569025fd0 973 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 43 54 - T 17-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD13_21340 9ebbfcfd37dc7dc94cfad76569025fd0 973 Gene3D G3DSA:3.90.740.10 208 261 7.1E-7 T 17-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 BJD13_21340 9ebbfcfd37dc7dc94cfad76569025fd0 973 Gene3D G3DSA:3.40.50.620 345 580 2.7E-69 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD13_21340 9ebbfcfd37dc7dc94cfad76569025fd0 973 SUPERFAMILY SSF47323 667 924 1.64E-62 T 17-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD13_21340 9ebbfcfd37dc7dc94cfad76569025fd0 973 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 909 972 1.8E-18 T 17-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 BJD13_21340 9ebbfcfd37dc7dc94cfad76569025fd0 973 Gene3D G3DSA:1.10.730.10 604 842 4.2E-67 T 17-10-2018 BJD13_21340 9ebbfcfd37dc7dc94cfad76569025fd0 973 Pfam PF08264 Anticodon-binding domain of tRNA 697 849 2.0E-41 T 17-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 BJD13_21340 9ebbfcfd37dc7dc94cfad76569025fd0 973 SUPERFAMILY SSF52374 2 666 1.13E-129 T 17-10-2018 BJD13_15475 5228d875061f41b4cdfe0a7cef8bfb3d 318 Pfam PF00970 Oxidoreductase FAD-binding domain 30 96 2.2E-4 T 17-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 BJD13_15475 5228d875061f41b4cdfe0a7cef8bfb3d 318 Gene3D G3DSA:3.10.20.30 223 318 1.1E-23 T 17-10-2018 IPR012675 Beta-grasp domain superfamily BJD13_15475 5228d875061f41b4cdfe0a7cef8bfb3d 318 Gene3D G3DSA:3.40.50.80 102 219 1.2E-24 T 17-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BJD13_15475 5228d875061f41b4cdfe0a7cef8bfb3d 318 SUPERFAMILY SSF54292 209 316 9.96E-27 T 17-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 BJD13_15475 5228d875061f41b4cdfe0a7cef8bfb3d 318 Gene3D G3DSA:2.40.30.10 1 98 3.6E-26 T 17-10-2018 BJD13_15475 5228d875061f41b4cdfe0a7cef8bfb3d 318 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 240 308 9.3E-10 T 17-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 BJD13_15475 5228d875061f41b4cdfe0a7cef8bfb3d 318 PRINTS PR00409 Phthalate dioxygenase reductase family signature 187 195 3.6E-36 T 17-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 BJD13_15475 5228d875061f41b4cdfe0a7cef8bfb3d 318 PRINTS PR00409 Phthalate dioxygenase reductase family signature 27 37 3.6E-36 T 17-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 BJD13_15475 5228d875061f41b4cdfe0a7cef8bfb3d 318 PRINTS PR00409 Phthalate dioxygenase reductase family signature 108 127 3.6E-36 T 17-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 BJD13_15475 5228d875061f41b4cdfe0a7cef8bfb3d 318 PRINTS PR00409 Phthalate dioxygenase reductase family signature 73 87 3.6E-36 T 17-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 BJD13_15475 5228d875061f41b4cdfe0a7cef8bfb3d 318 PRINTS PR00409 Phthalate dioxygenase reductase family signature 49 63 3.6E-36 T 17-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 BJD13_15475 5228d875061f41b4cdfe0a7cef8bfb3d 318 PRINTS PR00409 Phthalate dioxygenase reductase family signature 37 49 3.6E-36 T 17-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 BJD13_15475 5228d875061f41b4cdfe0a7cef8bfb3d 318 PRINTS PR00409 Phthalate dioxygenase reductase family signature 133 142 3.6E-36 T 17-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 BJD13_15475 5228d875061f41b4cdfe0a7cef8bfb3d 318 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 267 275 - T 17-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 BJD13_15475 5228d875061f41b4cdfe0a7cef8bfb3d 318 Pfam PF00175 Oxidoreductase NAD-binding domain 109 199 2.4E-5 T 17-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 BJD13_15475 5228d875061f41b4cdfe0a7cef8bfb3d 318 SUPERFAMILY SSF52343 95 222 1.03E-26 T 17-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BJD13_15475 5228d875061f41b4cdfe0a7cef8bfb3d 318 SUPERFAMILY SSF63380 2 97 1.47E-24 T 17-10-2018 IPR017938 Riboflavin synthase-like beta-barrel BJD13_20330 faf9261ea8d33b79036cfdbf3a16eeda 308 SUPERFAMILY SSF46785 3 112 1.09E-21 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_20330 faf9261ea8d33b79036cfdbf3a16eeda 308 SUPERFAMILY SSF53850 87 297 1.34E-39 T 17-10-2018 BJD13_20330 faf9261ea8d33b79036cfdbf3a16eeda 308 Pfam PF03466 LysR substrate binding domain 88 294 2.6E-36 T 17-10-2018 IPR005119 LysR, substrate-binding BJD13_20330 faf9261ea8d33b79036cfdbf3a16eeda 308 Gene3D G3DSA:3.40.190.290 91 294 1.1E-54 T 17-10-2018 BJD13_20330 faf9261ea8d33b79036cfdbf3a16eeda 308 Gene3D G3DSA:1.10.10.10 2 90 3.8E-26 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_20330 faf9261ea8d33b79036cfdbf3a16eeda 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.6E-18 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_12005 0b6bad785e32ff2fb3fac6f74523c117 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 1.0E-33 T 17-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal BJD13_12005 0b6bad785e32ff2fb3fac6f74523c117 396 SUPERFAMILY SSF50465 300 395 8.63E-36 T 17-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal BJD13_12005 0b6bad785e32ff2fb3fac6f74523c117 396 SUPERFAMILY SSF50447 207 303 1.53E-32 T 17-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BJD13_12005 0b6bad785e32ff2fb3fac6f74523c117 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 149 5.5E-14 T 17-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BJD13_12005 0b6bad785e32ff2fb3fac6f74523c117 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 17-10-2018 IPR031157 Tr-type G domain, conserved site BJD13_12005 0b6bad785e32ff2fb3fac6f74523c117 396 Gene3D G3DSA:3.40.50.300 1 205 2.0E-68 T 17-10-2018 BJD13_12005 0b6bad785e32ff2fb3fac6f74523c117 396 Pfam PF03144 Elongation factor Tu domain 2 227 296 4.7E-20 T 17-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 BJD13_12005 0b6bad785e32ff2fb3fac6f74523c117 396 Gene3D G3DSA:2.40.30.10 340 395 7.6E-30 T 17-10-2018 BJD13_12005 0b6bad785e32ff2fb3fac6f74523c117 396 Gene3D G3DSA:2.40.30.10 208 336 8.4E-55 T 17-10-2018 BJD13_12005 0b6bad785e32ff2fb3fac6f74523c117 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 3.9E-56 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD13_12005 0b6bad785e32ff2fb3fac6f74523c117 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 396 1.8E-226 T 17-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BJD13_12005 0b6bad785e32ff2fb3fac6f74523c117 396 SUPERFAMILY SSF52540 6 221 2.12E-59 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_12005 0b6bad785e32ff2fb3fac6f74523c117 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.099 T 17-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BJD13_12005 0b6bad785e32ff2fb3fac6f74523c117 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.9E-24 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD13_12005 0b6bad785e32ff2fb3fac6f74523c117 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.9E-24 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD13_12005 0b6bad785e32ff2fb3fac6f74523c117 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.9E-24 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD13_12005 0b6bad785e32ff2fb3fac6f74523c117 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.9E-24 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD13_12005 0b6bad785e32ff2fb3fac6f74523c117 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.9E-24 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD13_11940 0b6bad785e32ff2fb3fac6f74523c117 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 1.0E-33 T 17-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal BJD13_11940 0b6bad785e32ff2fb3fac6f74523c117 396 SUPERFAMILY SSF50465 300 395 8.63E-36 T 17-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal BJD13_11940 0b6bad785e32ff2fb3fac6f74523c117 396 SUPERFAMILY SSF50447 207 303 1.53E-32 T 17-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BJD13_11940 0b6bad785e32ff2fb3fac6f74523c117 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 149 5.5E-14 T 17-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BJD13_11940 0b6bad785e32ff2fb3fac6f74523c117 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 17-10-2018 IPR031157 Tr-type G domain, conserved site BJD13_11940 0b6bad785e32ff2fb3fac6f74523c117 396 Gene3D G3DSA:3.40.50.300 1 205 2.0E-68 T 17-10-2018 BJD13_11940 0b6bad785e32ff2fb3fac6f74523c117 396 Pfam PF03144 Elongation factor Tu domain 2 227 296 4.7E-20 T 17-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 BJD13_11940 0b6bad785e32ff2fb3fac6f74523c117 396 Gene3D G3DSA:2.40.30.10 340 395 7.6E-30 T 17-10-2018 BJD13_11940 0b6bad785e32ff2fb3fac6f74523c117 396 Gene3D G3DSA:2.40.30.10 208 336 8.4E-55 T 17-10-2018 BJD13_11940 0b6bad785e32ff2fb3fac6f74523c117 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 3.9E-56 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD13_11940 0b6bad785e32ff2fb3fac6f74523c117 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 396 1.8E-226 T 17-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BJD13_11940 0b6bad785e32ff2fb3fac6f74523c117 396 SUPERFAMILY SSF52540 6 221 2.12E-59 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_11940 0b6bad785e32ff2fb3fac6f74523c117 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.099 T 17-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BJD13_11940 0b6bad785e32ff2fb3fac6f74523c117 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.9E-24 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD13_11940 0b6bad785e32ff2fb3fac6f74523c117 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.9E-24 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD13_11940 0b6bad785e32ff2fb3fac6f74523c117 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.9E-24 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD13_11940 0b6bad785e32ff2fb3fac6f74523c117 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.9E-24 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD13_11940 0b6bad785e32ff2fb3fac6f74523c117 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.9E-24 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD13_12290 b3200715ed76467843ce195cb24255d8 636 Gene3D G3DSA:3.30.565.10 337 494 3.5E-42 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_12290 b3200715ed76467843ce195cb24255d8 636 Gene3D G3DSA:3.40.50.2300 511 636 2.2E-25 T 17-10-2018 BJD13_12290 b3200715ed76467843ce195cb24255d8 636 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 451 3.1E-14 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_12290 b3200715ed76467843ce195cb24255d8 636 PRINTS PR00344 Bacterial sensor protein C-terminal signature 457 475 3.1E-14 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_12290 b3200715ed76467843ce195cb24255d8 636 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 493 3.1E-14 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_12290 b3200715ed76467843ce195cb24255d8 636 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 437 3.1E-14 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_12290 b3200715ed76467843ce195cb24255d8 636 SMART SM00387 386 496 2.6E-37 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_12290 b3200715ed76467843ce195cb24255d8 636 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 387 494 1.1E-24 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_12290 b3200715ed76467843ce195cb24255d8 636 SUPERFAMILY SSF52172 518 635 2.56E-25 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_12290 b3200715ed76467843ce195cb24255d8 636 Pfam PF00512 His Kinase A (phospho-acceptor) domain 275 339 2.3E-14 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_12290 b3200715ed76467843ce195cb24255d8 636 Pfam PF00072 Response regulator receiver domain 520 631 3.5E-17 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_12290 b3200715ed76467843ce195cb24255d8 636 SUPERFAMILY SSF47384 263 341 8.24E-20 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD13_12290 b3200715ed76467843ce195cb24255d8 636 SMART SM00388 275 340 5.4E-19 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_12290 b3200715ed76467843ce195cb24255d8 636 SMART SM00448 517 631 2.4E-20 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_12290 b3200715ed76467843ce195cb24255d8 636 Gene3D G3DSA:1.10.287.130 242 336 4.8E-25 T 17-10-2018 BJD13_12290 b3200715ed76467843ce195cb24255d8 636 SUPERFAMILY SSF55874 330 494 8.91E-44 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_12290 b3200715ed76467843ce195cb24255d8 636 Pfam PF05227 CHASE3 domain 46 176 2.3E-21 T 17-10-2018 IPR007891 CHASE3 BJD13_12290 b3200715ed76467843ce195cb24255d8 636 Gene3D G3DSA:1.20.1440.210 52 174 2.3E-11 T 17-10-2018 BJD13_06110 725dc9e895b5dcc8848062e7e46e7285 362 Pfam PF13379 NMT1-like family 3 251 6.0E-79 T 17-10-2018 BJD13_06110 725dc9e895b5dcc8848062e7e46e7285 362 SUPERFAMILY SSF53850 8 242 2.95E-26 T 17-10-2018 BJD13_06110 725dc9e895b5dcc8848062e7e46e7285 362 Gene3D G3DSA:3.40.190.10 10 360 3.7E-106 T 17-10-2018 BJD13_06110 725dc9e895b5dcc8848062e7e46e7285 362 Gene3D G3DSA:3.40.190.10 95 202 3.7E-106 T 17-10-2018 BJD13_20460 bad9d7ef1af3421b6cc5a76c92a93a85 389 Gene3D G3DSA:3.40.50.720 3 272 3.9E-136 T 17-10-2018 BJD13_20460 bad9d7ef1af3421b6cc5a76c92a93a85 389 Gene3D G3DSA:3.90.25.10 192 327 3.9E-136 T 17-10-2018 BJD13_20460 bad9d7ef1af3421b6cc5a76c92a93a85 389 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 333 1.8E-129 T 17-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 BJD13_20460 bad9d7ef1af3421b6cc5a76c92a93a85 389 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 323 8.2E-56 T 17-10-2018 IPR016040 NAD(P)-binding domain BJD13_20460 bad9d7ef1af3421b6cc5a76c92a93a85 389 SUPERFAMILY SSF51735 1 333 3.33E-94 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_04840 58a0d1055ed94381ce8f31cf37a2eef5 340 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 17-10-2018 BJD13_04840 58a0d1055ed94381ce8f31cf37a2eef5 340 Gene3D G3DSA:3.40.50.2300 60 308 1.4E-74 T 17-10-2018 BJD13_04840 58a0d1055ed94381ce8f31cf37a2eef5 340 SUPERFAMILY SSF47413 5 63 2.63E-16 T 17-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BJD13_04840 58a0d1055ed94381ce8f31cf37a2eef5 340 Gene3D G3DSA:3.40.50.2300 164 292 1.4E-74 T 17-10-2018 BJD13_04840 58a0d1055ed94381ce8f31cf37a2eef5 340 Gene3D G3DSA:1.10.260.40 5 59 1.4E-21 T 17-10-2018 BJD13_04840 58a0d1055ed94381ce8f31cf37a2eef5 340 SMART SM00354 5 75 8.9E-25 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD13_04840 58a0d1055ed94381ce8f31cf37a2eef5 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 7 17 2.4E-5 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD13_04840 58a0d1055ed94381ce8f31cf37a2eef5 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 17 27 2.4E-5 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD13_04840 58a0d1055ed94381ce8f31cf37a2eef5 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 51 1.6E-14 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD13_04840 58a0d1055ed94381ce8f31cf37a2eef5 340 Pfam PF13377 Periplasmic binding protein-like domain 172 333 2.4E-37 T 17-10-2018 BJD13_04840 58a0d1055ed94381ce8f31cf37a2eef5 340 SUPERFAMILY SSF53822 64 335 5.72E-69 T 17-10-2018 IPR028082 Periplasmic binding protein-like I BJD13_19780 d5e5cb0b4f64b69a490bc1a9498e8a3c 571 Pfam PF12300 ATP-dependent RNA helicase RhlB 377 549 1.5E-68 T 17-10-2018 IPR022077 ATP-dependent RNA helicase RhlB GO:0016817 BJD13_19780 d5e5cb0b4f64b69a490bc1a9498e8a3c 571 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 390 50.901 T 17-10-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 BJD13_19780 d5e5cb0b4f64b69a490bc1a9498e8a3c 571 Gene3D G3DSA:3.40.50.300 2 223 3.6E-73 T 17-10-2018 BJD13_19780 d5e5cb0b4f64b69a490bc1a9498e8a3c 571 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 164 172 - T 17-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site BJD13_19780 d5e5cb0b4f64b69a490bc1a9498e8a3c 571 Gene3D G3DSA:3.40.50.300 227 389 8.9E-46 T 17-10-2018 BJD13_19780 d5e5cb0b4f64b69a490bc1a9498e8a3c 571 SMART SM00487 28 235 4.9E-56 T 17-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BJD13_19780 d5e5cb0b4f64b69a490bc1a9498e8a3c 571 Pfam PF00271 Helicase conserved C-terminal domain 245 352 2.5E-28 T 17-10-2018 IPR001650 Helicase, C-terminal BJD13_19780 d5e5cb0b4f64b69a490bc1a9498e8a3c 571 Pfam PF00270 DEAD/DEAH box helicase 33 206 2.6E-45 T 17-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BJD13_19780 d5e5cb0b4f64b69a490bc1a9498e8a3c 571 SMART SM00490 271 352 1.0E-31 T 17-10-2018 IPR001650 Helicase, C-terminal BJD13_19780 d5e5cb0b4f64b69a490bc1a9498e8a3c 571 SUPERFAMILY SSF52540 84 363 7.55E-73 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_08870 b62caf48aedf8d2b76e2816bf0ed46c4 449 Gene3D G3DSA:3.40.50.720 235 448 1.2E-76 T 17-10-2018 BJD13_08870 b62caf48aedf8d2b76e2816bf0ed46c4 449 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 324 428 5.2E-33 T 17-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BJD13_08870 b62caf48aedf8d2b76e2816bf0ed46c4 449 PIRSF PIRSF000124 1 443 2.2E-153 T 17-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 BJD13_08870 b62caf48aedf8d2b76e2816bf0ed46c4 449 Gene3D G3DSA:3.40.50.720 1 202 6.6E-80 T 17-10-2018 BJD13_08870 b62caf48aedf8d2b76e2816bf0ed46c4 449 SUPERFAMILY SSF48179 204 298 1.28E-33 T 17-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BJD13_08870 b62caf48aedf8d2b76e2816bf0ed46c4 449 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 186 6.6E-68 T 17-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BJD13_08870 b62caf48aedf8d2b76e2816bf0ed46c4 449 PIRSF PIRSF500134 1 446 8.0E-189 T 17-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 BJD13_08870 b62caf48aedf8d2b76e2816bf0ed46c4 449 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 424 5.5E-140 T 17-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 BJD13_08870 b62caf48aedf8d2b76e2816bf0ed46c4 449 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 204 296 1.3E-38 T 17-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BJD13_08870 b62caf48aedf8d2b76e2816bf0ed46c4 449 Gene3D G3DSA:1.20.5.100 203 234 1.6E-18 T 17-10-2018 BJD13_08870 b62caf48aedf8d2b76e2816bf0ed46c4 449 SMART SM00984 324 428 7.1E-53 T 17-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BJD13_08870 b62caf48aedf8d2b76e2816bf0ed46c4 449 SUPERFAMILY SSF51735 1 195 1.03E-58 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_08870 b62caf48aedf8d2b76e2816bf0ed46c4 449 SUPERFAMILY SSF52413 316 439 2.22E-39 T 17-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 BJD13_18040 f18c2a5dd00764ef6af30c81aed4147c 249 SUPERFAMILY SSF55781 74 248 1.18E-30 T 17-10-2018 BJD13_18040 f18c2a5dd00764ef6af30c81aed4147c 249 Pfam PF09339 IclR helix-turn-helix domain 12 63 5.5E-15 T 17-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 BJD13_18040 f18c2a5dd00764ef6af30c81aed4147c 249 Pfam PF01614 Bacterial transcriptional regulator 131 245 6.4E-8 T 17-10-2018 IPR014757 Transcription regulator IclR, C-terminal BJD13_18040 f18c2a5dd00764ef6af30c81aed4147c 249 SUPERFAMILY SSF46785 12 79 3.35E-15 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_18040 f18c2a5dd00764ef6af30c81aed4147c 249 SMART SM00346 10 99 2.0E-19 T 17-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 BJD13_18040 f18c2a5dd00764ef6af30c81aed4147c 249 Gene3D G3DSA:3.30.450.40 82 247 7.6E-27 T 17-10-2018 IPR029016 GAF-like domain superfamily BJD13_18040 f18c2a5dd00764ef6af30c81aed4147c 249 Gene3D G3DSA:1.10.10.10 2 79 1.1E-16 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_18680 b3997df0aab3a1e43411a5ff751c4c4c 455 Pfam PF00571 CBS domain 195 245 1.7E-9 T 17-10-2018 IPR000644 CBS domain BJD13_18680 b3997df0aab3a1e43411a5ff751c4c4c 455 SUPERFAMILY SSF54631 124 266 1.57E-26 T 17-10-2018 BJD13_18680 b3997df0aab3a1e43411a5ff751c4c4c 455 Gene3D G3DSA:1.25.60.10 5 120 6.0E-12 T 17-10-2018 IPR038076 MgtE, N-terminal domain superfamily BJD13_18680 b3997df0aab3a1e43411a5ff751c4c4c 455 SUPERFAMILY SSF161093 273 450 6.15E-48 T 17-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 BJD13_18680 b3997df0aab3a1e43411a5ff751c4c4c 455 Gene3D G3DSA:1.10.357.20 265 451 1.4E-58 T 17-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain BJD13_18680 b3997df0aab3a1e43411a5ff751c4c4c 455 Gene3D G3DSA:3.10.580.10 122 250 6.4E-36 T 17-10-2018 BJD13_18680 b3997df0aab3a1e43411a5ff751c4c4c 455 SMART SM00924 22 125 5.8E-21 T 17-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain BJD13_18680 b3997df0aab3a1e43411a5ff751c4c4c 455 SUPERFAMILY SSF158791 12 122 6.93E-17 T 17-10-2018 BJD13_18680 b3997df0aab3a1e43411a5ff751c4c4c 455 Pfam PF03448 MgtE intracellular N domain 23 123 4.5E-18 T 17-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain BJD13_18680 b3997df0aab3a1e43411a5ff751c4c4c 455 SMART SM00116 198 246 9.1E-11 T 17-10-2018 IPR000644 CBS domain BJD13_18680 b3997df0aab3a1e43411a5ff751c4c4c 455 Pfam PF01769 Divalent cation transporter 313 443 4.1E-30 T 17-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 BJD13_18680 b3997df0aab3a1e43411a5ff751c4c4c 455 TIGRFAM TIGR00400 mgtE: magnesium transporter 13 450 1.4E-100 T 17-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 BJD13_10695 08e8072785e723009df1f5d014e42bfc 272 SUPERFAMILY SSF109604 3 262 5.56E-63 T 17-10-2018 BJD13_10695 08e8072785e723009df1f5d014e42bfc 272 Pfam PF08668 HDOD domain 13 202 1.7E-52 T 17-10-2018 IPR013976 Metal-dependent hydrolase HDOD BJD13_10695 08e8072785e723009df1f5d014e42bfc 272 SMART SM00471 101 238 0.0019 T 17-10-2018 IPR003607 HD/PDEase domain BJD13_10695 08e8072785e723009df1f5d014e42bfc 272 Gene3D G3DSA:1.10.3210.10 2 264 1.0E-68 T 17-10-2018 BJD13_21790 a6ab5cef5d0c1c37c85159946ac8dd14 457 SUPERFAMILY SSF118215 20 423 4.84E-114 T 17-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 BJD13_21790 a6ab5cef5d0c1c37c85159946ac8dd14 457 Gene3D G3DSA:1.10.3860.10 11 435 4.9E-117 T 17-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 BJD13_21790 a6ab5cef5d0c1c37c85159946ac8dd14 457 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 316 339 - T 17-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site BJD13_21790 a6ab5cef5d0c1c37c85159946ac8dd14 457 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 47 62 - T 17-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site BJD13_21790 a6ab5cef5d0c1c37c85159946ac8dd14 457 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 13 449 37.326 T 17-10-2018 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 BJD13_21790 a6ab5cef5d0c1c37c85159946ac8dd14 457 PRINTS PR00173 Glutamate-aspartate symporter signature 166 188 3.2E-27 T 17-10-2018 BJD13_21790 a6ab5cef5d0c1c37c85159946ac8dd14 457 PRINTS PR00173 Glutamate-aspartate symporter signature 313 339 3.2E-27 T 17-10-2018 BJD13_21790 a6ab5cef5d0c1c37c85159946ac8dd14 457 PRINTS PR00173 Glutamate-aspartate symporter signature 348 367 3.2E-27 T 17-10-2018 BJD13_21790 a6ab5cef5d0c1c37c85159946ac8dd14 457 PRINTS PR00173 Glutamate-aspartate symporter signature 18 38 3.2E-27 T 17-10-2018 BJD13_21790 a6ab5cef5d0c1c37c85159946ac8dd14 457 PRINTS PR00173 Glutamate-aspartate symporter signature 213 232 3.2E-27 T 17-10-2018 BJD13_21790 a6ab5cef5d0c1c37c85159946ac8dd14 457 PRINTS PR00173 Glutamate-aspartate symporter signature 85 110 3.2E-27 T 17-10-2018 BJD13_21790 a6ab5cef5d0c1c37c85159946ac8dd14 457 Pfam PF00375 Sodium:dicarboxylate symporter family 20 422 4.1E-101 T 17-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BJD13_11450 4c23b0808da0bbd636c0f5f88b79f7e8 392 Gene3D G3DSA:3.10.350.10 343 388 3.1E-13 T 17-10-2018 IPR036779 LysM domain superfamily BJD13_11450 4c23b0808da0bbd636c0f5f88b79f7e8 392 SUPERFAMILY SSF54106 344 387 5.23E-9 T 17-10-2018 BJD13_11450 4c23b0808da0bbd636c0f5f88b79f7e8 392 SUPERFAMILY SSF53955 90 239 2.53E-32 T 17-10-2018 IPR023346 Lysozyme-like domain superfamily BJD13_11450 4c23b0808da0bbd636c0f5f88b79f7e8 392 Gene3D G3DSA:1.10.530.10 92 247 5.7E-25 T 17-10-2018 BJD13_11450 4c23b0808da0bbd636c0f5f88b79f7e8 392 Pfam PF01464 Transglycosylase SLT domain 100 204 1.2E-22 T 17-10-2018 IPR008258 Transglycosylase SLT domain 1 BJD13_11450 4c23b0808da0bbd636c0f5f88b79f7e8 392 Pfam PF01476 LysM domain 346 387 1.1E-10 T 17-10-2018 IPR018392 LysM domain BJD13_11450 4c23b0808da0bbd636c0f5f88b79f7e8 392 SMART SM00257 345 389 5.4E-10 T 17-10-2018 IPR018392 LysM domain BJD13_21085 559e3c31fb64f20d541d9ca8a9ad6499 462 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 17-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site BJD13_21085 559e3c31fb64f20d541d9ca8a9ad6499 462 SUPERFAMILY SSF52540 75 361 8.28E-74 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_21085 559e3c31fb64f20d541d9ca8a9ad6499 462 Gene3D G3DSA:3.40.50.300 1 212 3.1E-80 T 17-10-2018 BJD13_21085 559e3c31fb64f20d541d9ca8a9ad6499 462 Pfam PF00270 DEAD/DEAH box helicase 25 198 1.6E-49 T 17-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BJD13_21085 559e3c31fb64f20d541d9ca8a9ad6499 462 Pfam PF00271 Helicase conserved C-terminal domain 233 341 4.0E-29 T 17-10-2018 IPR001650 Helicase, C-terminal BJD13_21085 559e3c31fb64f20d541d9ca8a9ad6499 462 Gene3D G3DSA:3.40.50.300 215 375 4.9E-47 T 17-10-2018 BJD13_21085 559e3c31fb64f20d541d9ca8a9ad6499 462 SMART SM00490 260 341 2.1E-31 T 17-10-2018 IPR001650 Helicase, C-terminal BJD13_21085 559e3c31fb64f20d541d9ca8a9ad6499 462 SMART SM00487 20 224 1.1E-60 T 17-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BJD13_03050 d9d86f17d69fa4720dea2ddc10a7280d 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 4.4E-19 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_03050 d9d86f17d69fa4720dea2ddc10a7280d 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.3E-7 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_03050 d9d86f17d69fa4720dea2ddc10a7280d 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.3E-7 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_03050 d9d86f17d69fa4720dea2ddc10a7280d 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.3E-7 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_03050 d9d86f17d69fa4720dea2ddc10a7280d 308 SUPERFAMILY SSF46785 4 87 8.55E-20 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_03050 d9d86f17d69fa4720dea2ddc10a7280d 308 Pfam PF03466 LysR substrate binding domain 95 293 3.8E-23 T 17-10-2018 IPR005119 LysR, substrate-binding BJD13_03050 d9d86f17d69fa4720dea2ddc10a7280d 308 Gene3D G3DSA:3.40.190.10 103 289 3.6E-41 T 17-10-2018 BJD13_03050 d9d86f17d69fa4720dea2ddc10a7280d 308 Gene3D G3DSA:1.10.10.10 7 94 1.3E-20 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_03050 d9d86f17d69fa4720dea2ddc10a7280d 308 Gene3D G3DSA:3.40.190.10 164 264 3.6E-41 T 17-10-2018 BJD13_03050 d9d86f17d69fa4720dea2ddc10a7280d 308 SUPERFAMILY SSF53850 95 296 7.24E-27 T 17-10-2018 BJD13_08230 3878507dbfa71991a30d636af8f511ed 156 Gene3D G3DSA:2.40.50.140 30 136 7.3E-36 T 17-10-2018 BJD13_08230 3878507dbfa71991a30d636af8f511ed 156 SUPERFAMILY SSF82093 30 136 2.75E-36 T 17-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 BJD13_08230 3878507dbfa71991a30d636af8f511ed 156 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 140 30.699 T 17-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 BJD13_08230 3878507dbfa71991a30d636af8f511ed 156 Pfam PF03100 CcmE 5 130 4.3E-44 T 17-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 BJD13_15735 232d48cf6ad443f460f705ccc4634491 694 Gene3D G3DSA:3.40.50.1820 359 665 6.5E-76 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_15735 232d48cf6ad443f460f705ccc4634491 694 SUPERFAMILY SSF82171 58 382 1.07E-16 T 17-10-2018 BJD13_15735 232d48cf6ad443f460f705ccc4634491 694 SUPERFAMILY SSF53474 393 654 6.95E-68 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_15735 232d48cf6ad443f460f705ccc4634491 694 Pfam PF00326 Prolyl oligopeptidase family 447 655 2.0E-43 T 17-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 BJD13_15735 232d48cf6ad443f460f705ccc4634491 694 Gene3D G3DSA:2.120.10.30 40 233 2.7E-12 T 17-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like BJD13_04295 5c67b378825c63135a24bc17d3faac8a 552 Pfam PF12729 Four helix bundle sensory module for signal transduction 4 185 1.4E-24 T 17-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain BJD13_04295 5c67b378825c63135a24bc17d3faac8a 552 SMART SM00283 267 500 9.5E-72 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD13_04295 5c67b378825c63135a24bc17d3faac8a 552 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 281 310 2.3E-28 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD13_04295 5c67b378825c63135a24bc17d3faac8a 552 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 2.3E-28 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD13_04295 5c67b378825c63135a24bc17d3faac8a 552 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 358 385 2.3E-28 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD13_04295 5c67b378825c63135a24bc17d3faac8a 552 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 387 416 2.3E-28 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD13_04295 5c67b378825c63135a24bc17d3faac8a 552 Pfam PF00672 HAMP domain 214 262 4.0E-7 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_04295 5c67b378825c63135a24bc17d3faac8a 552 SMART SM00304 214 266 3.7E-11 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_04295 5c67b378825c63135a24bc17d3faac8a 552 SUPERFAMILY SSF58104 234 501 8.89E-67 T 17-10-2018 BJD13_04295 5c67b378825c63135a24bc17d3faac8a 552 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 321 467 5.1E-34 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD13_04295 5c67b378825c63135a24bc17d3faac8a 552 Gene3D G3DSA:1.10.287.950 213 502 5.7E-76 T 17-10-2018 BJD13_20970 5bf019df0f5ee9163db54590d2614858 423 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 213 422 1.4E-31 T 17-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 BJD13_20970 5bf019df0f5ee9163db54590d2614858 423 Gene3D G3DSA:2.40.420.20 65 408 1.5E-42 T 17-10-2018 BJD13_20970 5bf019df0f5ee9163db54590d2614858 423 Gene3D G3DSA:2.40.30.170 70 349 1.5E-42 T 17-10-2018 BJD13_20970 5bf019df0f5ee9163db54590d2614858 423 Gene3D G3DSA:1.10.287.470 114 241 1.5E-42 T 17-10-2018 BJD13_20970 5bf019df0f5ee9163db54590d2614858 423 Gene3D G3DSA:2.40.50.100 81 275 1.5E-42 T 17-10-2018 BJD13_20970 5bf019df0f5ee9163db54590d2614858 423 Pfam PF13533 Biotin-lipoyl like 93 129 2.0E-7 T 17-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain BJD13_20970 5bf019df0f5ee9163db54590d2614858 423 Pfam PF13437 HlyD family secretion protein 241 334 2.1E-12 T 17-10-2018 BJD13_20970 5bf019df0f5ee9163db54590d2614858 423 SUPERFAMILY SSF111369 94 160 9.68E-5 T 17-10-2018 BJD13_11495 a50546a3de7f26855cace22585768196 430 PIRSF PIRSF003095 1 428 7.1E-104 T 17-10-2018 IPR005215 Trigger factor GO:0015031 BJD13_11495 a50546a3de7f26855cace22585768196 430 Hamap MF_00303 Trigger factor [tig]. 1 418 17.544 T 17-10-2018 IPR005215 Trigger factor GO:0015031 BJD13_11495 a50546a3de7f26855cace22585768196 430 Gene3D G3DSA:3.30.70.1050 1 110 3.4E-31 T 17-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 BJD13_11495 a50546a3de7f26855cace22585768196 430 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 260 413 1.8E-36 T 17-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 BJD13_11495 a50546a3de7f26855cace22585768196 430 TIGRFAM TIGR00115 tig: trigger factor 11 411 1.5E-108 T 17-10-2018 IPR005215 Trigger factor GO:0015031 BJD13_11495 a50546a3de7f26855cace22585768196 430 SUPERFAMILY SSF54534 128 242 8.35E-17 T 17-10-2018 BJD13_11495 a50546a3de7f26855cace22585768196 430 SUPERFAMILY SSF109998 244 428 4.32E-38 T 17-10-2018 IPR027304 Trigger factor/SurA domain superfamily BJD13_11495 a50546a3de7f26855cace22585768196 430 Gene3D G3DSA:1.10.3120.10 114 416 1.4E-68 T 17-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 BJD13_11495 a50546a3de7f26855cace22585768196 430 Gene3D G3DSA:3.10.50.40 146 242 1.4E-68 T 17-10-2018 BJD13_11495 a50546a3de7f26855cace22585768196 430 SUPERFAMILY SSF102735 1 125 1.02E-30 T 17-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 BJD13_11495 a50546a3de7f26855cace22585768196 430 Pfam PF05697 Bacterial trigger factor protein (TF) 1 140 3.0E-35 T 17-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 BJD13_08330 7272a786027ccbdf8cc0978c3a500114 223 Gene3D G3DSA:3.30.1150.10 121 220 2.6E-26 T 17-10-2018 BJD13_08330 7272a786027ccbdf8cc0978c3a500114 223 SUPERFAMILY SSF74653 142 219 1.57E-22 T 17-10-2018 BJD13_08330 7272a786027ccbdf8cc0978c3a500114 223 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 143 220 5.6E-24 T 17-10-2018 IPR037682 TonB, C-terminal GO:0055085 BJD13_08330 7272a786027ccbdf8cc0978c3a500114 223 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 145 221 6.9E-23 T 17-10-2018 IPR006260 TonB/TolA, C-terminal BJD13_14450 71c0e0fde1703201c0711ac36ba72503 104 Gene3D G3DSA:1.10.3730.20 1 104 1.7E-33 T 17-10-2018 BJD13_14450 71c0e0fde1703201c0711ac36ba72503 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 3.7E-29 T 17-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 BJD13_14450 71c0e0fde1703201c0711ac36ba72503 104 SUPERFAMILY SSF103481 4 102 9.29E-20 T 17-10-2018 BJD13_15390 ae6d3de49af43cfcc339c87b9b92d398 407 Gene3D G3DSA:2.40.50.100 66 210 6.0E-108 T 17-10-2018 BJD13_15390 ae6d3de49af43cfcc339c87b9b92d398 407 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 68 295 2.5E-14 T 17-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BJD13_15390 ae6d3de49af43cfcc339c87b9b92d398 407 Gene3D G3DSA:2.40.30.170 55 305 6.0E-108 T 17-10-2018 BJD13_15390 ae6d3de49af43cfcc339c87b9b92d398 407 Gene3D G3DSA:2.40.420.20 306 375 6.0E-108 T 17-10-2018 BJD13_15390 ae6d3de49af43cfcc339c87b9b92d398 407 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 42 377 1.4E-85 T 17-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 BJD13_15390 ae6d3de49af43cfcc339c87b9b92d398 407 Gene3D G3DSA:1.10.287.470 101 174 6.0E-108 T 17-10-2018 BJD13_15390 ae6d3de49af43cfcc339c87b9b92d398 407 SUPERFAMILY SSF111369 56 300 2.09E-79 T 17-10-2018 BJD13_13190 336695a1b71c27ff6a3d69dcc90ea906 200 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 30 2.2E-8 T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD13_13190 336695a1b71c27ff6a3d69dcc90ea906 200 Gene3D G3DSA:3.10.610.10 39 146 5.2E-21 T 17-10-2018 BJD13_13190 336695a1b71c27ff6a3d69dcc90ea906 200 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD13_13190 336695a1b71c27ff6a3d69dcc90ea906 200 Gene3D G3DSA:2.10.70.20 150 198 7.4E-7 T 17-10-2018 BJD13_13190 336695a1b71c27ff6a3d69dcc90ea906 200 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 8 195 2.5E-39 T 17-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 BJD13_13190 336695a1b71c27ff6a3d69dcc90ea906 200 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 29 1.2E-9 T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD13_13190 336695a1b71c27ff6a3d69dcc90ea906 200 Pfam PF11612 Type II secretion system (T2SS), protein J 60 193 2.0E-32 T 17-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 BJD13_13190 336695a1b71c27ff6a3d69dcc90ea906 200 SUPERFAMILY SSF54523 41 198 3.02E-38 T 17-10-2018 BJD13_08880 cb6f4f1e77824002efe2cf248a21a92b 185 PIRSF PIRSF000303 2 184 1.9E-55 T 17-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 BJD13_08880 cb6f4f1e77824002efe2cf248a21a92b 185 SUPERFAMILY SSF52833 25 180 2.99E-48 T 17-10-2018 IPR036249 Thioredoxin-like superfamily BJD13_08880 cb6f4f1e77824002efe2cf248a21a92b 185 Pfam PF00255 Glutathione peroxidase 32 134 1.9E-32 T 17-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 BJD13_08880 cb6f4f1e77824002efe2cf248a21a92b 185 ProSitePatterns PS00460 Glutathione peroxidases active site. 48 63 - T 17-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 BJD13_08880 cb6f4f1e77824002efe2cf248a21a92b 185 Gene3D G3DSA:3.40.30.10 17 184 3.7E-51 T 17-10-2018 BJD13_08880 cb6f4f1e77824002efe2cf248a21a92b 185 PRINTS PR01011 Glutathione peroxidase family signature 81 97 1.5E-14 T 17-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 BJD13_08880 cb6f4f1e77824002efe2cf248a21a92b 185 PRINTS PR01011 Glutathione peroxidase family signature 142 151 1.5E-14 T 17-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 BJD13_08880 cb6f4f1e77824002efe2cf248a21a92b 185 PRINTS PR01011 Glutathione peroxidase family signature 46 63 1.5E-14 T 17-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 BJD13_18370 af6093154332d50c340e0d278e05656f 434 Gene3D G3DSA:2.100.10.30 290 432 5.5E-20 T 17-10-2018 IPR036404 Jacalin-like lectin domain superfamily BJD13_18370 af6093154332d50c340e0d278e05656f 434 SMART SM00915 305 433 4.2E-11 T 17-10-2018 IPR001229 Jacalin-like lectin domain BJD13_18370 af6093154332d50c340e0d278e05656f 434 SUPERFAMILY SSF56219 32 286 1.57E-42 T 17-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BJD13_18370 af6093154332d50c340e0d278e05656f 434 SUPERFAMILY SSF51101 295 431 1.06E-25 T 17-10-2018 IPR036404 Jacalin-like lectin domain superfamily BJD13_18370 af6093154332d50c340e0d278e05656f 434 Gene3D G3DSA:3.60.10.10 28 286 4.6E-31 T 17-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BJD13_18370 af6093154332d50c340e0d278e05656f 434 Pfam PF01419 Jacalin-like lectin domain 314 431 7.2E-9 T 17-10-2018 IPR001229 Jacalin-like lectin domain BJD13_12285 34a4cc8d17a24f186e0fa2356657bf04 235 SUPERFAMILY SSF46894 163 233 6.12E-20 T 17-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BJD13_12285 34a4cc8d17a24f186e0fa2356657bf04 235 Gene3D G3DSA:3.30.450.40 13 151 2.4E-11 T 17-10-2018 IPR029016 GAF-like domain superfamily BJD13_12285 34a4cc8d17a24f186e0fa2356657bf04 235 SMART SM00421 171 228 5.6E-23 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_12285 34a4cc8d17a24f186e0fa2356657bf04 235 SUPERFAMILY SSF55781 22 147 6.32E-6 T 17-10-2018 BJD13_12285 34a4cc8d17a24f186e0fa2356657bf04 235 Gene3D G3DSA:1.10.10.10 152 231 1.3E-22 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_12285 34a4cc8d17a24f186e0fa2356657bf04 235 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 174 188 1.5E-12 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_12285 34a4cc8d17a24f186e0fa2356657bf04 235 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 188 204 1.5E-12 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_12285 34a4cc8d17a24f186e0fa2356657bf04 235 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 204 216 1.5E-12 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_12285 34a4cc8d17a24f186e0fa2356657bf04 235 Pfam PF00196 Bacterial regulatory proteins, luxR family 174 228 2.6E-19 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_01590 4610e71dfead17c70d300e620ecda3f4 388 SUPERFAMILY SSF52440 175 280 6.33E-36 T 17-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BJD13_01590 4610e71dfead17c70d300e620ecda3f4 388 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 386 2.4E-145 T 17-10-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain BJD13_01590 4610e71dfead17c70d300e620ecda3f4 388 SUPERFAMILY SSF56059 1 385 5.3E-82 T 17-10-2018 BJD13_01590 4610e71dfead17c70d300e620ecda3f4 388 Gene3D G3DSA:3.30.1490.330 265 345 2.4E-21 T 17-10-2018 BJD13_06530 565b3d89156cc9bbb3c49cb3bf25b95c 244 SUPERFAMILY SSF51735 12 242 5.45E-65 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_06530 565b3d89156cc9bbb3c49cb3bf25b95c 244 Gene3D G3DSA:3.40.50.720 1 243 1.4E-65 T 17-10-2018 BJD13_06530 565b3d89156cc9bbb3c49cb3bf25b95c 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 4.2E-21 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_06530 565b3d89156cc9bbb3c49cb3bf25b95c 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 4.2E-21 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_06530 565b3d89156cc9bbb3c49cb3bf25b95c 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 4.2E-21 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_06530 565b3d89156cc9bbb3c49cb3bf25b95c 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 4.2E-21 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_06530 565b3d89156cc9bbb3c49cb3bf25b95c 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 4.2E-21 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_06530 565b3d89156cc9bbb3c49cb3bf25b95c 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 241 9.2E-45 T 17-10-2018 BJD13_06530 565b3d89156cc9bbb3c49cb3bf25b95c 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 14 178 3.7E-6 T 17-10-2018 BJD13_08485 d579821443c977e1b5f5aa0b37ff2a0f 76 Gene3D G3DSA:4.10.640.10 20 75 1.1E-26 T 17-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_08485 d579821443c977e1b5f5aa0b37ff2a0f 76 SUPERFAMILY SSF46911 3 74 1.26E-28 T 17-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_08485 d579821443c977e1b5f5aa0b37ff2a0f 76 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 1.1E-35 T 17-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_08485 d579821443c977e1b5f5aa0b37ff2a0f 76 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 17-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_08485 d579821443c977e1b5f5aa0b37ff2a0f 76 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.026 T 17-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_08485 d579821443c977e1b5f5aa0b37ff2a0f 76 Pfam PF01084 Ribosomal protein S18 19 68 1.6E-24 T 17-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_08485 d579821443c977e1b5f5aa0b37ff2a0f 76 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.5E-17 T 17-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_08485 d579821443c977e1b5f5aa0b37ff2a0f 76 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.5E-17 T 17-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_08485 d579821443c977e1b5f5aa0b37ff2a0f 76 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.5E-17 T 17-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_08485 d579821443c977e1b5f5aa0b37ff2a0f 76 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.5E-17 T 17-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_08485 d579821443c977e1b5f5aa0b37ff2a0f 76 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 71 4.0E-23 T 17-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_07770 57b1eebadce777599d757fe096f9801b 303 SUPERFAMILY SSF63829 5 298 2.13E-57 T 17-10-2018 BJD13_07770 57b1eebadce777599d757fe096f9801b 303 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 101 122 1.1E-26 T 17-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) BJD13_07770 57b1eebadce777599d757fe096f9801b 303 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 207 224 1.1E-26 T 17-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) BJD13_07770 57b1eebadce777599d757fe096f9801b 303 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 249 267 1.1E-26 T 17-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) BJD13_07770 57b1eebadce777599d757fe096f9801b 303 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 167 187 1.1E-26 T 17-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) BJD13_07770 57b1eebadce777599d757fe096f9801b 303 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 20 37 1.1E-26 T 17-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) BJD13_07770 57b1eebadce777599d757fe096f9801b 303 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 20 267 2.2E-69 T 17-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region BJD13_07770 57b1eebadce777599d757fe096f9801b 303 Gene3D G3DSA:2.120.10.30 4 301 6.4E-88 T 17-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like BJD13_13525 cc02afdc4331c0c24dbf3f2d405ae512 183 Pfam PF00227 Proteasome subunit 10 181 1.1E-20 T 17-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 BJD13_13525 cc02afdc4331c0c24dbf3f2d405ae512 183 PIRSF PIRSF039093 6 183 1.2E-81 T 17-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 BJD13_13525 cc02afdc4331c0c24dbf3f2d405ae512 183 SUPERFAMILY SSF56235 9 182 4.48E-53 T 17-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BJD13_13525 cc02afdc4331c0c24dbf3f2d405ae512 183 Gene3D G3DSA:3.60.20.10 9 183 1.6E-62 T 17-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BJD13_13525 cc02afdc4331c0c24dbf3f2d405ae512 183 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 12 183 40.972 T 17-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 BJD13_13525 cc02afdc4331c0c24dbf3f2d405ae512 183 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 13 183 8.7E-82 T 17-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 BJD13_23410 fa40a1ef00c68d4f100555d912761ccb 120 SUPERFAMILY SSF52172 1 120 4.7E-37 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_23410 fa40a1ef00c68d4f100555d912761ccb 120 Gene3D G3DSA:3.40.50.12740 1 120 8.4E-42 T 17-10-2018 BJD13_23410 fa40a1ef00c68d4f100555d912761ccb 120 Pfam PF00072 Response regulator receiver domain 4 116 3.6E-26 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_23410 fa40a1ef00c68d4f100555d912761ccb 120 SMART SM00448 2 115 1.8E-36 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_22490 fade5472f4a7a361936f8d9b92e2f9b8 568 SUPERFAMILY SSF56014 419 552 4.19E-32 T 17-10-2018 BJD13_22490 fade5472f4a7a361936f8d9b92e2f9b8 568 SUPERFAMILY SSF56014 135 332 4.06E-53 T 17-10-2018 BJD13_22490 fade5472f4a7a361936f8d9b92e2f9b8 568 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 162 316 1.3E-41 T 17-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BJD13_22490 fade5472f4a7a361936f8d9b92e2f9b8 568 Gene3D G3DSA:3.90.480.10 68 177 2.2E-26 T 17-10-2018 BJD13_22490 fade5472f4a7a361936f8d9b92e2f9b8 568 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 468 484 - T 17-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BJD13_22490 fade5472f4a7a361936f8d9b92e2f9b8 568 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 63 125 1.1E-15 T 17-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BJD13_22490 fade5472f4a7a361936f8d9b92e2f9b8 568 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 339 405 4.6E-14 T 17-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BJD13_22490 fade5472f4a7a361936f8d9b92e2f9b8 568 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 1 566 55.669 T 17-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BJD13_22490 fade5472f4a7a361936f8d9b92e2f9b8 568 Gene3D G3DSA:3.30.413.10 192 328 9.6E-43 T 17-10-2018 BJD13_22490 fade5472f4a7a361936f8d9b92e2f9b8 568 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 420 550 0.11 T 17-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BJD13_22490 fade5472f4a7a361936f8d9b92e2f9b8 568 Gene3D G3DSA:3.30.413.10 417 553 1.5E-32 T 17-10-2018 BJD13_22490 fade5472f4a7a361936f8d9b92e2f9b8 568 SUPERFAMILY SSF55124 334 410 1.1E-17 T 17-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BJD13_22490 fade5472f4a7a361936f8d9b92e2f9b8 568 PRINTS PR00397 Sirohaem Fe-binding site signature 468 486 3.1E-8 T 17-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BJD13_22490 fade5472f4a7a361936f8d9b92e2f9b8 568 PRINTS PR00397 Sirohaem Fe-binding site signature 420 438 3.1E-8 T 17-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BJD13_22490 fade5472f4a7a361936f8d9b92e2f9b8 568 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 6 551 3.9E-267 T 17-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BJD13_22490 fade5472f4a7a361936f8d9b92e2f9b8 568 SUPERFAMILY SSF55124 4 134 2.45E-29 T 17-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BJD13_04920 684ed782f7850f950c191de56ede9823 103 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.1E-28 T 17-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BJD13_04920 684ed782f7850f950c191de56ede9823 103 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 17-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 BJD13_04920 684ed782f7850f950c191de56ede9823 103 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 29.005 T 17-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 BJD13_04920 684ed782f7850f950c191de56ede9823 103 SMART SM00411 1 91 1.3E-39 T 17-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BJD13_04920 684ed782f7850f950c191de56ede9823 103 SUPERFAMILY SSF47729 1 91 3.53E-30 T 17-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 BJD13_04920 684ed782f7850f950c191de56ede9823 103 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 91 1.6E-42 T 17-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 BJD13_04920 684ed782f7850f950c191de56ede9823 103 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 1.3E-18 T 17-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BJD13_04920 684ed782f7850f950c191de56ede9823 103 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 1.3E-18 T 17-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BJD13_04920 684ed782f7850f950c191de56ede9823 103 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 1.3E-18 T 17-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BJD13_04920 684ed782f7850f950c191de56ede9823 103 Gene3D G3DSA:4.10.520.10 1 93 1.8E-32 T 17-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 BJD13_15145 ecbbbf9a72f935cb4a5611afd655ba48 504 SUPERFAMILY SSF51905 1 377 4.63E-32 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_15145 ecbbbf9a72f935cb4a5611afd655ba48 504 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 349 361 3.1E-29 T 17-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BJD13_15145 ecbbbf9a72f935cb4a5611afd655ba48 504 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 34 46 3.1E-29 T 17-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BJD13_15145 ecbbbf9a72f935cb4a5611afd655ba48 504 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 79 91 3.1E-29 T 17-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BJD13_15145 ecbbbf9a72f935cb4a5611afd655ba48 504 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 317 323 3.1E-29 T 17-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BJD13_15145 ecbbbf9a72f935cb4a5611afd655ba48 504 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 18 28 3.1E-29 T 17-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BJD13_15145 ecbbbf9a72f935cb4a5611afd655ba48 504 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 5 17 3.1E-29 T 17-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BJD13_15145 ecbbbf9a72f935cb4a5611afd655ba48 504 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 10 27 - T 17-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BJD13_15145 ecbbbf9a72f935cb4a5611afd655ba48 504 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 354 364 - T 17-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BJD13_15145 ecbbbf9a72f935cb4a5611afd655ba48 504 Pfam PF01266 FAD dependent oxidoreductase 6 367 6.5E-47 T 17-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 BJD13_15145 ecbbbf9a72f935cb4a5611afd655ba48 504 Gene3D G3DSA:1.10.8.870 394 462 2.5E-24 T 17-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BJD13_15145 ecbbbf9a72f935cb4a5611afd655ba48 504 Gene3D G3DSA:3.30.9.10 83 324 8.8E-134 T 17-10-2018 BJD13_15145 ecbbbf9a72f935cb4a5611afd655ba48 504 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 388 483 3.6E-11 T 17-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BJD13_15145 ecbbbf9a72f935cb4a5611afd655ba48 504 Gene3D G3DSA:3.50.50.60 6 368 8.8E-134 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_15145 ecbbbf9a72f935cb4a5611afd655ba48 504 SUPERFAMILY SSF54373 230 323 7.06E-6 T 17-10-2018 BJD13_05520 1b38cdcdf6e1f45e52c47862c58b4acd 328 Pfam PF00849 RNA pseudouridylate synthase 109 262 4.8E-27 T 17-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD13_05520 1b38cdcdf6e1f45e52c47862c58b4acd 328 Pfam PF01479 S4 domain 28 74 9.3E-9 T 17-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_05520 1b38cdcdf6e1f45e52c47862c58b4acd 328 SMART SM00363 28 90 6.9E-7 T 17-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_05520 1b38cdcdf6e1f45e52c47862c58b4acd 328 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 146 160 - T 17-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD13_05520 1b38cdcdf6e1f45e52c47862c58b4acd 328 Gene3D G3DSA:3.30.2350.10 100 328 3.0E-66 T 17-10-2018 BJD13_05520 1b38cdcdf6e1f45e52c47862c58b4acd 328 SUPERFAMILY SSF55120 97 327 4.48E-56 T 17-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD13_05520 1b38cdcdf6e1f45e52c47862c58b4acd 328 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 24 326 5.8E-74 T 17-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD13_05520 1b38cdcdf6e1f45e52c47862c58b4acd 328 Gene3D G3DSA:3.10.290.10 17 80 1.5E-17 T 17-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 BJD13_05520 1b38cdcdf6e1f45e52c47862c58b4acd 328 SUPERFAMILY SSF55174 27 78 7.23E-9 T 17-10-2018 BJD13_10775 66b51301a2b278be572f414f576e035d 765 SMART SM01008 41 155 3.9E-38 T 17-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead BJD13_10775 66b51301a2b278be572f414f576e035d 765 Gene3D G3DSA:3.30.365.10 185 407 5.9E-51 T 17-10-2018 BJD13_10775 66b51301a2b278be572f414f576e035d 765 Gene3D G3DSA:3.30.365.10 209 301 5.9E-51 T 17-10-2018 BJD13_10775 66b51301a2b278be572f414f576e035d 765 Gene3D G3DSA:3.30.365.20 427 765 3.1E-83 T 17-10-2018 BJD13_10775 66b51301a2b278be572f414f576e035d 765 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 183 705 1.4E-108 T 17-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 BJD13_10775 66b51301a2b278be572f414f576e035d 765 SUPERFAMILY SSF54665 23 160 1.23E-37 T 17-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily BJD13_10775 66b51301a2b278be572f414f576e035d 765 SUPERFAMILY SSF56003 177 763 6.15E-155 T 17-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 BJD13_10775 66b51301a2b278be572f414f576e035d 765 Gene3D G3DSA:3.90.1170.50 11 155 2.7E-30 T 17-10-2018 BJD13_10775 66b51301a2b278be572f414f576e035d 765 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 41 151 6.4E-22 T 17-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead BJD13_19135 605a8e2032f179abdf9dd92e0053bf44 456 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 146 430 6.5E-104 T 17-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 BJD13_19135 605a8e2032f179abdf9dd92e0053bf44 456 PRINTS PR00481 Cytosol aminopeptidase signature 241 262 5.8E-43 T 17-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BJD13_19135 605a8e2032f179abdf9dd92e0053bf44 456 PRINTS PR00481 Cytosol aminopeptidase signature 278 299 5.8E-43 T 17-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BJD13_19135 605a8e2032f179abdf9dd92e0053bf44 456 PRINTS PR00481 Cytosol aminopeptidase signature 300 320 5.8E-43 T 17-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BJD13_19135 605a8e2032f179abdf9dd92e0053bf44 456 PRINTS PR00481 Cytosol aminopeptidase signature 219 236 5.8E-43 T 17-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BJD13_19135 605a8e2032f179abdf9dd92e0053bf44 456 PRINTS PR00481 Cytosol aminopeptidase signature 328 343 5.8E-43 T 17-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BJD13_19135 605a8e2032f179abdf9dd92e0053bf44 456 Gene3D G3DSA:3.40.220.10 6 131 8.1E-25 T 17-10-2018 BJD13_19135 605a8e2032f179abdf9dd92e0053bf44 456 SUPERFAMILY SSF53187 139 453 6.28E-106 T 17-10-2018 BJD13_19135 605a8e2032f179abdf9dd92e0053bf44 456 Gene3D G3DSA:3.40.630.10 132 454 7.7E-122 T 17-10-2018 BJD13_19135 605a8e2032f179abdf9dd92e0053bf44 456 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 304 311 - T 17-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 BJD13_05925 ed0a956e2957356513b0d016bfa1d86d 900 SMART SM01086 806 896 1.4E-9 T 17-10-2018 IPR019489 Clp ATPase, C-terminal BJD13_05925 ed0a956e2957356513b0d016bfa1d86d 900 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 316 328 - T 17-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 BJD13_05925 ed0a956e2957356513b0d016bfa1d86d 900 Pfam PF07724 AAA domain (Cdc48 subfamily) 633 799 1.0E-39 T 17-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BJD13_05925 ed0a956e2957356513b0d016bfa1d86d 900 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 225 336 1.8E-8 T 17-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BJD13_05925 ed0a956e2957356513b0d016bfa1d86d 900 Gene3D G3DSA:1.10.8.60 806 895 1.1E-10 T 17-10-2018 BJD13_05925 ed0a956e2957356513b0d016bfa1d86d 900 Gene3D G3DSA:3.40.50.300 366 581 2.7E-42 T 17-10-2018 BJD13_05925 ed0a956e2957356513b0d016bfa1d86d 900 SUPERFAMILY SSF81923 12 132 4.51E-16 T 17-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 BJD13_05925 ed0a956e2957356513b0d016bfa1d86d 900 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 668 686 - T 17-10-2018 IPR028299 ClpA/B, conserved site 2 BJD13_05925 ed0a956e2957356513b0d016bfa1d86d 900 SUPERFAMILY SSF52540 186 507 5.84E-71 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_05925 ed0a956e2957356513b0d016bfa1d86d 900 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 712 730 3.4E-31 T 17-10-2018 IPR001270 ClpA/B family GO:0005524 BJD13_05925 ed0a956e2957356513b0d016bfa1d86d 900 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 683 701 3.4E-31 T 17-10-2018 IPR001270 ClpA/B family GO:0005524 BJD13_05925 ed0a956e2957356513b0d016bfa1d86d 900 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 638 656 3.4E-31 T 17-10-2018 IPR001270 ClpA/B family GO:0005524 BJD13_05925 ed0a956e2957356513b0d016bfa1d86d 900 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 745 759 3.4E-31 T 17-10-2018 IPR001270 ClpA/B family GO:0005524 BJD13_05925 ed0a956e2957356513b0d016bfa1d86d 900 SMART SM00382 220 365 3.7E-8 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_05925 ed0a956e2957356513b0d016bfa1d86d 900 SMART SM00382 634 776 7.1E-9 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_05925 ed0a956e2957356513b0d016bfa1d86d 900 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 13 886 0.0 T 17-10-2018 IPR017729 Type VI secretion system, ATPase ClpV1 BJD13_05925 ed0a956e2957356513b0d016bfa1d86d 900 SUPERFAMILY SSF52540 583 877 6.83E-64 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_05925 ed0a956e2957356513b0d016bfa1d86d 900 Gene3D G3DSA:3.40.50.300 587 804 1.2E-66 T 17-10-2018 BJD13_05925 ed0a956e2957356513b0d016bfa1d86d 900 Gene3D G3DSA:3.40.50.300 175 364 2.5E-63 T 17-10-2018 BJD13_05925 ed0a956e2957356513b0d016bfa1d86d 900 Gene3D G3DSA:1.10.1780.10 1 161 4.2E-42 T 17-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 BJD13_05925 ed0a956e2957356513b0d016bfa1d86d 900 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 806 882 1.2E-12 T 17-10-2018 IPR019489 Clp ATPase, C-terminal BJD13_12595 36c1933a957cb6d4bfa5af0b9d529e9a 743 Gene3D G3DSA:2.170.130.10 41 170 8.9E-39 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_12595 36c1933a957cb6d4bfa5af0b9d529e9a 743 Pfam PF00593 TonB dependent receptor 288 741 6.1E-57 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_12595 36c1933a957cb6d4bfa5af0b9d529e9a 743 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 41 743 8.2E-124 T 17-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 BJD13_12595 36c1933a957cb6d4bfa5af0b9d529e9a 743 Gene3D G3DSA:2.40.170.20 184 743 1.7E-105 T 17-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BJD13_12595 36c1933a957cb6d4bfa5af0b9d529e9a 743 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 41 743 4.3E-109 T 17-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 BJD13_12595 36c1933a957cb6d4bfa5af0b9d529e9a 743 Pfam PF07715 TonB-dependent Receptor Plug Domain 55 165 1.6E-27 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_12595 36c1933a957cb6d4bfa5af0b9d529e9a 743 SUPERFAMILY SSF56935 41 743 8.06E-113 T 17-10-2018 BJD13_08040 f70918775cb404b50233bd9bb254cf4e 253 Pfam PF02698 DUF218 domain 68 231 1.8E-26 T 17-10-2018 IPR003848 Domain of unknown function DUF218 BJD13_08040 f70918775cb404b50233bd9bb254cf4e 253 Gene3D G3DSA:3.40.50.620 113 206 2.7E-6 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD13_14755 1c23fe59237177c4a47144459f282272 649 Pfam PF02446 4-alpha-glucanotransferase 311 620 6.8E-70 T 17-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 BJD13_14755 1c23fe59237177c4a47144459f282272 649 Pfam PF02446 4-alpha-glucanotransferase 158 303 1.3E-13 T 17-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 BJD13_14755 1c23fe59237177c4a47144459f282272 649 Gene3D G3DSA:3.20.20.80 308 638 2.0E-84 T 17-10-2018 BJD13_14755 1c23fe59237177c4a47144459f282272 649 Gene3D G3DSA:3.20.20.80 150 307 4.5E-11 T 17-10-2018 BJD13_14755 1c23fe59237177c4a47144459f282272 649 SUPERFAMILY SSF51445 152 625 1.44E-117 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily BJD13_16940 3df283ddbb4b657ed3abbecba08bba7b 140 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 135 5.5E-25 T 17-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 BJD13_16940 3df283ddbb4b657ed3abbecba08bba7b 140 Gene3D G3DSA:3.30.420.270 63 132 4.4E-9 T 17-10-2018 BJD13_07780 b00690411459a3d74bd14fc22d9633ff 107 SUPERFAMILY SSF54862 2 86 6.9E-24 T 17-10-2018 BJD13_07780 b00690411459a3d74bd14fc22d9633ff 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 1.6E-16 T 17-10-2018 IPR000813 7Fe ferredoxin GO:0009055 BJD13_07780 b00690411459a3d74bd14fc22d9633ff 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 1.6E-16 T 17-10-2018 IPR000813 7Fe ferredoxin GO:0009055 BJD13_07780 b00690411459a3d74bd14fc22d9633ff 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 1.6E-16 T 17-10-2018 IPR000813 7Fe ferredoxin GO:0009055 BJD13_07780 b00690411459a3d74bd14fc22d9633ff 107 Pfam PF11953 Domain of unknown function (DUF3470) 66 107 8.6E-18 T 17-10-2018 IPR022569 Ferredoxin, C-terminal BJD13_07780 b00690411459a3d74bd14fc22d9633ff 107 Pfam PF00037 4Fe-4S binding domain 34 56 3.5E-7 T 17-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BJD13_07780 b00690411459a3d74bd14fc22d9633ff 107 Gene3D G3DSA:3.30.70.20 2 98 2.0E-30 T 17-10-2018 BJD13_07780 b00690411459a3d74bd14fc22d9633ff 107 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 17-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BJD13_15330 d2a8a1b478864191617ce5389080362a 485 Pfam PF07396 Phosphate-selective porin O and P 125 485 5.3E-84 T 17-10-2018 IPR010870 Phosphate-selective porin O/P BJD13_15330 d2a8a1b478864191617ce5389080362a 485 Gene3D G3DSA:2.40.160.10 108 484 7.4E-20 T 17-10-2018 IPR023614 Porin domain superfamily BJD13_15330 d2a8a1b478864191617ce5389080362a 485 SUPERFAMILY SSF56935 116 485 1.28E-10 T 17-10-2018 BJD13_01860 3d57032d44458a7d25f57f45648ca2d3 235 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 5 228 7.4E-68 T 17-10-2018 IPR017788 DnaA regulatory inactivator Hda GO:0032297 BJD13_01860 3d57032d44458a7d25f57f45648ca2d3 235 Gene3D G3DSA:3.40.50.300 2 160 3.9E-25 T 17-10-2018 BJD13_01860 3d57032d44458a7d25f57f45648ca2d3 235 SUPERFAMILY SSF52540 13 209 2.31E-24 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_01860 3d57032d44458a7d25f57f45648ca2d3 235 Gene3D G3DSA:1.10.8.60 163 229 3.9E-22 T 17-10-2018 BJD13_01860 3d57032d44458a7d25f57f45648ca2d3 235 Pfam PF00308 Bacterial dnaA protein 29 204 9.3E-5 T 17-10-2018 IPR013317 Chromosomal replication initiator protein DnaA BJD13_04965 e8f70755a43323b16bc25d9f9954de3f 485 SMART SM01240 7 471 0.0 T 17-10-2018 BJD13_04965 e8f70755a43323b16bc25d9f9954de3f 485 Gene3D G3DSA:3.20.20.70 1 484 2.0E-206 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD13_04965 e8f70755a43323b16bc25d9f9954de3f 485 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 452 7.0E-188 T 17-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 BJD13_04965 e8f70755a43323b16bc25d9f9954de3f 485 SUPERFAMILY SSF51412 2 475 4.58E-124 T 17-10-2018 BJD13_04965 e8f70755a43323b16bc25d9f9954de3f 485 SMART SM00116 96 143 2.7E-11 T 17-10-2018 IPR000644 CBS domain BJD13_04965 e8f70755a43323b16bc25d9f9954de3f 485 SMART SM00116 157 205 1.6E-7 T 17-10-2018 IPR000644 CBS domain BJD13_04965 e8f70755a43323b16bc25d9f9954de3f 485 Pfam PF00571 CBS domain 95 139 5.8E-11 T 17-10-2018 IPR000644 CBS domain BJD13_04965 e8f70755a43323b16bc25d9f9954de3f 485 Pfam PF00571 CBS domain 148 201 5.6E-6 T 17-10-2018 IPR000644 CBS domain BJD13_04965 e8f70755a43323b16bc25d9f9954de3f 485 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 484 81.981 T 17-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 BJD13_04965 e8f70755a43323b16bc25d9f9954de3f 485 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 294 306 - T 17-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 BJD13_04965 e8f70755a43323b16bc25d9f9954de3f 485 SUPERFAMILY SSF54631 94 202 8.97E-28 T 17-10-2018 BJD13_04965 e8f70755a43323b16bc25d9f9954de3f 485 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 471 5.9E-157 T 17-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 BJD13_04965 e8f70755a43323b16bc25d9f9954de3f 485 PIRSF PIRSF000130 1 485 5.2E-201 T 17-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 BJD13_21500 e326469d922e221ab5feb828d6ea9899 720 SUPERFAMILY SSF56935 25 720 1.62E-97 T 17-10-2018 BJD13_21500 e326469d922e221ab5feb828d6ea9899 720 Pfam PF00593 TonB dependent receptor 233 718 2.5E-43 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_21500 e326469d922e221ab5feb828d6ea9899 720 Gene3D G3DSA:2.40.170.20 170 720 3.5E-82 T 17-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BJD13_21500 e326469d922e221ab5feb828d6ea9899 720 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 703 720 - T 17-10-2018 IPR010917 TonB-dependent receptor, conserved site BJD13_21500 e326469d922e221ab5feb828d6ea9899 720 Pfam PF07715 TonB-dependent Receptor Plug Domain 62 159 2.5E-7 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_21500 e326469d922e221ab5feb828d6ea9899 720 Gene3D G3DSA:2.170.130.10 28 169 1.2E-15 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_21500 e326469d922e221ab5feb828d6ea9899 720 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 63 720 8.6E-170 T 17-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 BJD13_15380 e39d90e7212e0a984e262df99ea77a6d 482 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 11 468 1.8E-119 T 17-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 BJD13_15380 e39d90e7212e0a984e262df99ea77a6d 482 Gene3D G3DSA:1.20.1600.10 58 468 7.7E-133 T 17-10-2018 BJD13_15380 e39d90e7212e0a984e262df99ea77a6d 482 Pfam PF02321 Outer membrane efflux protein 67 257 4.2E-29 T 17-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 BJD13_15380 e39d90e7212e0a984e262df99ea77a6d 482 Pfam PF02321 Outer membrane efflux protein 282 466 1.9E-30 T 17-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 BJD13_15380 e39d90e7212e0a984e262df99ea77a6d 482 Gene3D G3DSA:2.20.200.10 104 357 7.7E-133 T 17-10-2018 BJD13_15380 e39d90e7212e0a984e262df99ea77a6d 482 SUPERFAMILY SSF56954 2 469 3.4E-110 T 17-10-2018 BJD13_05575 90e7b214b64d096620ac57a716abf933 304 SUPERFAMILY SSF51735 5 232 9.14E-36 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_05575 90e7b214b64d096620ac57a716abf933 304 Gene3D G3DSA:3.40.50.720 8 255 1.2E-35 T 17-10-2018 BJD13_05575 90e7b214b64d096620ac57a716abf933 304 Pfam PF05368 NmrA-like family 9 227 4.7E-29 T 17-10-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 BJD13_12025 e2fe0a41afd9adcd2adbb1e390abd450 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 44.19 T 17-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 BJD13_12025 e2fe0a41afd9adcd2adbb1e390abd450 363 Gene3D G3DSA:1.10.150.300 113 200 5.5E-149 T 17-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 BJD13_12025 e2fe0a41afd9adcd2adbb1e390abd450 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 5.0E-34 T 17-10-2018 IPR006073 GTP binding domain GO:0005525 BJD13_12025 e2fe0a41afd9adcd2adbb1e390abd450 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 5.0E-34 T 17-10-2018 IPR006073 GTP binding domain GO:0005525 BJD13_12025 e2fe0a41afd9adcd2adbb1e390abd450 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 5.0E-34 T 17-10-2018 IPR006073 GTP binding domain GO:0005525 BJD13_12025 e2fe0a41afd9adcd2adbb1e390abd450 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 5.0E-34 T 17-10-2018 IPR006073 GTP binding domain GO:0005525 BJD13_12025 e2fe0a41afd9adcd2adbb1e390abd450 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 1.6E-154 T 17-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 BJD13_12025 e2fe0a41afd9adcd2adbb1e390abd450 363 PIRSF PIRSF006641 1 363 7.4E-154 T 17-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 BJD13_12025 e2fe0a41afd9adcd2adbb1e390abd450 363 Gene3D G3DSA:3.10.20.30 48 361 5.5E-149 T 17-10-2018 IPR012675 Beta-grasp domain superfamily BJD13_12025 e2fe0a41afd9adcd2adbb1e390abd450 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 2.3E-37 T 17-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 BJD13_12025 e2fe0a41afd9adcd2adbb1e390abd450 363 SUPERFAMILY SSF81271 279 360 1.74E-34 T 17-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 BJD13_12025 e2fe0a41afd9adcd2adbb1e390abd450 363 Gene3D G3DSA:3.40.50.300 4 278 5.5E-149 T 17-10-2018 BJD13_12025 e2fe0a41afd9adcd2adbb1e390abd450 363 SUPERFAMILY SSF52540 3 301 1.58E-82 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_12025 e2fe0a41afd9adcd2adbb1e390abd450 363 Pfam PF01926 50S ribosome-binding GTPase 5 128 2.9E-22 T 17-10-2018 IPR006073 GTP binding domain GO:0005525 BJD13_07615 bf5962f9567c525c17298a909c71c760 870 SUPERFAMILY SSF51445 68 450 7.05E-105 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily BJD13_07615 bf5962f9567c525c17298a909c71c760 870 Gene3D G3DSA:3.40.50.1700 437 668 7.3E-68 T 17-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 BJD13_07615 bf5962f9567c525c17298a909c71c760 870 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 451 665 6.9E-35 T 17-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 BJD13_07615 bf5962f9567c525c17298a909c71c760 870 Gene3D G3DSA:3.20.20.300 71 432 6.6E-126 T 17-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 BJD13_07615 bf5962f9567c525c17298a909c71c760 870 Gene3D G3DSA:2.60.120.430 686 870 4.5E-25 T 17-10-2018 BJD13_07615 bf5962f9567c525c17298a909c71c760 870 SUPERFAMILY SSF52279 451 666 2.88E-46 T 17-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 BJD13_07615 bf5962f9567c525c17298a909c71c760 870 PRINTS PR00133 Glycosyl hydrolase family 3 signature 263 279 2.2E-19 T 17-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BJD13_07615 bf5962f9567c525c17298a909c71c760 870 PRINTS PR00133 Glycosyl hydrolase family 3 signature 176 195 2.2E-19 T 17-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BJD13_07615 bf5962f9567c525c17298a909c71c760 870 PRINTS PR00133 Glycosyl hydrolase family 3 signature 222 238 2.2E-19 T 17-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BJD13_07615 bf5962f9567c525c17298a909c71c760 870 PRINTS PR00133 Glycosyl hydrolase family 3 signature 152 168 2.2E-19 T 17-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BJD13_07615 bf5962f9567c525c17298a909c71c760 870 PRINTS PR00133 Glycosyl hydrolase family 3 signature 333 351 2.2E-19 T 17-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BJD13_07615 bf5962f9567c525c17298a909c71c760 870 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 87 410 1.5E-77 T 17-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BJD13_12750 ab7eae20e358b56b6773f89a3a736b04 325 Gene3D G3DSA:3.40.50.720 123 262 1.2E-99 T 17-10-2018 BJD13_12750 ab7eae20e358b56b6773f89a3a736b04 325 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 6 325 1.1E-129 T 17-10-2018 IPR014189 Quinone oxidoreductase PIG3 Reactome: R-HSA-6803205 BJD13_12750 ab7eae20e358b56b6773f89a3a736b04 325 Gene3D G3DSA:3.90.180.10 20 323 1.2E-99 T 17-10-2018 BJD13_12750 ab7eae20e358b56b6773f89a3a736b04 325 SMART SM00829 16 323 2.2E-37 T 17-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 BJD13_12750 ab7eae20e358b56b6773f89a3a736b04 325 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 33 90 4.7E-7 T 17-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 BJD13_12750 ab7eae20e358b56b6773f89a3a736b04 325 SUPERFAMILY SSF51735 114 288 3.41E-45 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_12750 ab7eae20e358b56b6773f89a3a736b04 325 Pfam PF00107 Zinc-binding dehydrogenase 154 269 8.7E-28 T 17-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 BJD13_12750 ab7eae20e358b56b6773f89a3a736b04 325 SUPERFAMILY SSF50129 12 140 1.29E-36 T 17-10-2018 IPR011032 GroES-like superfamily BJD13_02805 4be7cc7f67df2a7917fd9adc0a511cde 362 Gene3D G3DSA:2.60.40.2970 38 181 4.9E-39 T 17-10-2018 BJD13_02805 4be7cc7f67df2a7917fd9adc0a511cde 362 Pfam PF14521 Lysine-specific metallo-endopeptidase 226 356 1.0E-43 T 17-10-2018 IPR029463 Lysine-specific metallo-endopeptidase GO:0004222 BJD13_02805 4be7cc7f67df2a7917fd9adc0a511cde 362 SUPERFAMILY SSF55486 196 361 4.58E-51 T 17-10-2018 BJD13_02805 4be7cc7f67df2a7917fd9adc0a511cde 362 SMART SM01351 223 356 2.3E-65 T 17-10-2018 IPR029463 Lysine-specific metallo-endopeptidase GO:0004222 BJD13_02805 4be7cc7f67df2a7917fd9adc0a511cde 362 Gene3D G3DSA:3.40.390.10 193 362 5.9E-63 T 17-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 BJD13_10395 7a04dbe871f04b835da81be0992616e9 86 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 2.0E-18 T 17-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_10395 7a04dbe871f04b835da81be0992616e9 86 PRINTS PR00063 Ribosomal protein L27 signature 54 78 3.8E-38 T 17-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_10395 7a04dbe871f04b835da81be0992616e9 86 PRINTS PR00063 Ribosomal protein L27 signature 4 28 3.8E-38 T 17-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_10395 7a04dbe871f04b835da81be0992616e9 86 PRINTS PR00063 Ribosomal protein L27 signature 29 53 3.8E-38 T 17-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_10395 7a04dbe871f04b835da81be0992616e9 86 Pfam PF01016 Ribosomal L27 protein 2 82 3.1E-38 T 17-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_10395 7a04dbe871f04b835da81be0992616e9 86 SUPERFAMILY SSF110324 2 82 8.02E-34 T 17-10-2018 BJD13_10395 7a04dbe871f04b835da81be0992616e9 86 Gene3D G3DSA:2.40.50.100 21 86 1.9E-30 T 17-10-2018 BJD13_10395 7a04dbe871f04b835da81be0992616e9 86 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.229 T 17-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_10395 7a04dbe871f04b835da81be0992616e9 86 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 17-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_10395 7a04dbe871f04b835da81be0992616e9 86 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 83 7.0E-38 T 17-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_10240 b293362e146a479dab54fe951ca9c727 194 Pfam PF01339 CheB methylesterase 13 188 1.7E-54 T 17-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 BJD13_10240 b293362e146a479dab54fe951ca9c727 194 SUPERFAMILY SSF52738 9 192 7.06E-55 T 17-10-2018 IPR035909 Methylesterase CheB, C-terminal BJD13_10240 b293362e146a479dab54fe951ca9c727 194 Gene3D G3DSA:3.40.50.180 3 193 2.5E-59 T 17-10-2018 IPR035909 Methylesterase CheB, C-terminal BJD13_08110 79a6a771a1a3797eb68971bf4e9d26dd 373 Gene3D G3DSA:3.40.50.2000 31 360 9.4E-46 T 17-10-2018 BJD13_08110 79a6a771a1a3797eb68971bf4e9d26dd 373 Pfam PF13579 Glycosyl transferase 4-like domain 23 168 3.6E-10 T 17-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 BJD13_08110 79a6a771a1a3797eb68971bf4e9d26dd 373 SUPERFAMILY SSF53756 22 363 7.14E-58 T 17-10-2018 BJD13_08110 79a6a771a1a3797eb68971bf4e9d26dd 373 Pfam PF00534 Glycosyl transferases group 1 191 339 1.9E-24 T 17-10-2018 IPR001296 Glycosyl transferase, family 1 BJD13_08110 79a6a771a1a3797eb68971bf4e9d26dd 373 Gene3D G3DSA:3.40.50.2000 172 344 9.4E-46 T 17-10-2018 BJD13_08700 2a3074445af9bd05ae0ceb3f67401ad8 236 PIRSF PIRSF001435 14 225 1.6E-48 T 17-10-2018 BJD13_08700 2a3074445af9bd05ae0ceb3f67401ad8 236 TIGRFAM TIGR01083 nth: endonuclease III 20 209 1.6E-86 T 17-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 BJD13_08700 2a3074445af9bd05ae0ceb3f67401ad8 236 Hamap MF_00942 Endonuclease III [nth]. 16 224 37.272 T 17-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 BJD13_08700 2a3074445af9bd05ae0ceb3f67401ad8 236 Pfam PF00633 Helix-hairpin-helix motif 114 142 4.9E-8 T 17-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 BJD13_08700 2a3074445af9bd05ae0ceb3f67401ad8 236 SUPERFAMILY SSF48150 16 226 2.51E-72 T 17-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 BJD13_08700 2a3074445af9bd05ae0ceb3f67401ad8 236 ProSitePatterns PS01155 Endonuclease III family signature. 117 146 - T 17-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 BJD13_08700 2a3074445af9bd05ae0ceb3f67401ad8 236 SMART SM00478 53 200 9.0E-54 T 17-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 BJD13_08700 2a3074445af9bd05ae0ceb3f67401ad8 236 Gene3D G3DSA:1.10.1670.10 26 218 7.6E-77 T 17-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 BJD13_08700 2a3074445af9bd05ae0ceb3f67401ad8 236 Gene3D G3DSA:1.10.340.30 36 147 7.6E-77 T 17-10-2018 BJD13_08700 2a3074445af9bd05ae0ceb3f67401ad8 236 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 49 183 2.4E-18 T 17-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 BJD13_15035 2be607f714db9f9beaab69d2460388b5 205 Pfam PF02698 DUF218 domain 49 192 8.9E-30 T 17-10-2018 IPR003848 Domain of unknown function DUF218 BJD13_15035 2be607f714db9f9beaab69d2460388b5 205 Gene3D G3DSA:3.40.50.620 94 175 2.4E-5 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD13_17015 84318941e832b00f979be571c242a697 446 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 219 239 7.4E-5 T 17-10-2018 IPR006073 GTP binding domain GO:0005525 BJD13_17015 84318941e832b00f979be571c242a697 446 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 268 283 7.4E-5 T 17-10-2018 IPR006073 GTP binding domain GO:0005525 BJD13_17015 84318941e832b00f979be571c242a697 446 Pfam PF12631 MnmE helical domain 123 443 8.8E-49 T 17-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 BJD13_17015 84318941e832b00f979be571c242a697 446 Gene3D G3DSA:3.40.50.300 217 375 8.7E-94 T 17-10-2018 BJD13_17015 84318941e832b00f979be571c242a697 446 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 6 446 31.409 T 17-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 BJD13_17015 84318941e832b00f979be571c242a697 446 Pfam PF01926 50S ribosome-binding GTPase 219 309 5.7E-23 T 17-10-2018 IPR006073 GTP binding domain GO:0005525 BJD13_17015 84318941e832b00f979be571c242a697 446 Gene3D G3DSA:3.30.1360.120 1 121 5.6E-40 T 17-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 BJD13_17015 84318941e832b00f979be571c242a697 446 Pfam PF10396 GTP-binding protein TrmE N-terminus 7 120 8.0E-37 T 17-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 BJD13_17015 84318941e832b00f979be571c242a697 446 SUPERFAMILY SSF52540 72 359 4.62E-41 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_17015 84318941e832b00f979be571c242a697 446 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 220 336 6.5E-22 T 17-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BJD13_17015 84318941e832b00f979be571c242a697 446 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 15 446 1.2E-98 T 17-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 BJD13_17015 84318941e832b00f979be571c242a697 446 Gene3D G3DSA:1.20.120.430 122 446 8.7E-94 T 17-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 BJD13_09475 afc0c86783e0052b8b8fd2ebce598819 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 26.91 T 17-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 BJD13_09475 afc0c86783e0052b8b8fd2ebce598819 185 Pfam PF01765 Ribosome recycling factor 20 183 2.8E-62 T 17-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 BJD13_09475 afc0c86783e0052b8b8fd2ebce598819 185 Gene3D G3DSA:3.30.1360.40 31 105 2.1E-66 T 17-10-2018 BJD13_09475 afc0c86783e0052b8b8fd2ebce598819 185 Gene3D G3DSA:1.10.132.20 12 182 2.1E-66 T 17-10-2018 BJD13_09475 afc0c86783e0052b8b8fd2ebce598819 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 185 1.3E-70 T 17-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 BJD13_09475 afc0c86783e0052b8b8fd2ebce598819 185 SUPERFAMILY SSF55194 1 185 5.1E-68 T 17-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 BJD13_14605 f83afd74ca2fb2f80a43bf1ef121349a 439 Hamap MF_00334 Homogentisate 1,2-dioxygenase [hmgA]. 6 432 71.492 T 17-10-2018 IPR022950 Homogentisate 1,2-dioxygenase, bacterial GO:0004411|GO:0006559|GO:0006572|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5 BJD13_14605 f83afd74ca2fb2f80a43bf1ef121349a 439 Gene3D G3DSA:2.60.120.10 273 401 9.0E-60 T 17-10-2018 IPR014710 RmlC-like jelly roll fold BJD13_14605 f83afd74ca2fb2f80a43bf1ef121349a 439 SUPERFAMILY SSF51182 5 433 3.11E-174 T 17-10-2018 IPR011051 RmlC-like cupin domain superfamily BJD13_14605 f83afd74ca2fb2f80a43bf1ef121349a 439 Pfam PF04209 homogentisate 1,2-dioxygenase 6 430 3.5E-206 T 17-10-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 BJD13_14605 f83afd74ca2fb2f80a43bf1ef121349a 439 TIGRFAM TIGR01015 hmgA: homogentisate 1,2-dioxygenase 5 430 3.0E-203 T 17-10-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 BJD13_16295 4ddb16e9989ba30836f32c01779620cd 1038 Pfam PF11896 Domain of unknown function (DUF3416) 388 571 1.2E-50 T 17-10-2018 IPR021828 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S GO:0004553 KEGG: 00500+2.4.99.16|MetaCyc: PWY-7900 BJD13_16295 4ddb16e9989ba30836f32c01779620cd 1038 Gene3D G3DSA:3.20.20.80 572 936 8.5E-154 T 17-10-2018 BJD13_16295 4ddb16e9989ba30836f32c01779620cd 1038 Gene3D G3DSA:2.60.40.1180 939 1038 3.1E-21 T 17-10-2018 IPR013780 Glycosyl hydrolase, all-beta BJD13_16295 4ddb16e9989ba30836f32c01779620cd 1038 SMART SM00642 581 906 4.4E-5 T 17-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BJD13_16295 4ddb16e9989ba30836f32c01779620cd 1038 Gene3D G3DSA:3.20.20.80 25 269 4.4E-30 T 17-10-2018 BJD13_16295 4ddb16e9989ba30836f32c01779620cd 1038 SUPERFAMILY SSF51445 39 242 5.4E-22 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily BJD13_16295 4ddb16e9989ba30836f32c01779620cd 1038 SUPERFAMILY SSF51445 546 934 1.95E-87 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily BJD13_16295 4ddb16e9989ba30836f32c01779620cd 1038 Hamap MF_02124 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase [glgE]. 385 1034 46.774 T 17-10-2018 IPR026585 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase GO:0016757 KEGG: 00500+2.4.99.16|MetaCyc: PWY-7900 BJD13_16295 4ddb16e9989ba30836f32c01779620cd 1038 Gene3D G3DSA:1.20.58.280 475 552 1.7E-47 T 17-10-2018 BJD13_16295 4ddb16e9989ba30836f32c01779620cd 1038 Pfam PF00128 Alpha amylase, catalytic domain 595 709 8.1E-5 T 17-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BJD13_16295 4ddb16e9989ba30836f32c01779620cd 1038 Gene3D G3DSA:2.60.40.10 388 558 1.7E-47 T 17-10-2018 IPR013783 Immunoglobulin-like fold BJD13_04565 07c62ec9678a7c74c8fdaaa96989e40f 293 Pfam PF00753 Metallo-beta-lactamase superfamily 34 242 2.0E-20 T 17-10-2018 IPR001279 Metallo-beta-lactamase BJD13_04565 07c62ec9678a7c74c8fdaaa96989e40f 293 SUPERFAMILY SSF56281 32 266 1.57E-29 T 17-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BJD13_04565 07c62ec9678a7c74c8fdaaa96989e40f 293 SMART SM00849 33 266 4.0E-15 T 17-10-2018 IPR001279 Metallo-beta-lactamase BJD13_04565 07c62ec9678a7c74c8fdaaa96989e40f 293 Gene3D G3DSA:3.60.15.10 1 280 9.5E-55 T 17-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BJD13_04785 5d188468ff841aa9a21e6b413f3abcd8 231 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 17 227 2.8E-58 T 17-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria BJD13_04785 5d188468ff841aa9a21e6b413f3abcd8 231 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 112 130 2.1E-49 T 17-10-2018 BJD13_04785 5d188468ff841aa9a21e6b413f3abcd8 231 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 87 110 2.1E-49 T 17-10-2018 BJD13_04785 5d188468ff841aa9a21e6b413f3abcd8 231 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 64 81 2.1E-49 T 17-10-2018 BJD13_04785 5d188468ff841aa9a21e6b413f3abcd8 231 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 204 227 2.1E-49 T 17-10-2018 BJD13_04785 5d188468ff841aa9a21e6b413f3abcd8 231 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 167 186 2.1E-49 T 17-10-2018 BJD13_04785 5d188468ff841aa9a21e6b413f3abcd8 231 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 38 59 2.1E-49 T 17-10-2018 BJD13_04785 5d188468ff841aa9a21e6b413f3abcd8 231 Pfam PF03379 CcmB protein 15 228 3.8E-62 T 17-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD13_04785 5d188468ff841aa9a21e6b413f3abcd8 231 PIRSF PIRSF002764 7 231 3.7E-77 T 17-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria BJD13_04465 cf797a24af806dd5e76f9249b1709bdb 186 Pfam PF00156 Phosphoribosyl transferase domain 65 164 1.2E-17 T 17-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 BJD13_04465 cf797a24af806dd5e76f9249b1709bdb 186 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 18 186 34.086 T 17-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 BJD13_04465 cf797a24af806dd5e76f9249b1709bdb 186 SUPERFAMILY SSF53271 20 178 2.1E-46 T 17-10-2018 IPR029057 Phosphoribosyltransferase-like BJD13_04465 cf797a24af806dd5e76f9249b1709bdb 186 Gene3D G3DSA:3.40.50.2020 5 186 1.0E-56 T 17-10-2018 BJD13_04465 cf797a24af806dd5e76f9249b1709bdb 186 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 20 184 1.5E-61 T 17-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 BJD13_22385 0e57d6f062b160ec324ba2228b00b28b 333 SUPERFAMILY SSF51735 3 168 1.25E-67 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_22385 0e57d6f062b160ec324ba2228b00b28b 333 SMART SM00846 3 152 5.2E-99 T 17-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD13_22385 0e57d6f062b160ec324ba2228b00b28b 333 PIRSF PIRSF000149 1 333 3.5E-131 T 17-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD13_22385 0e57d6f062b160ec324ba2228b00b28b 333 SUPERFAMILY SSF55347 151 314 1.01E-73 T 17-10-2018 BJD13_22385 0e57d6f062b160ec324ba2228b00b28b 333 Gene3D G3DSA:3.30.360.10 151 316 8.0E-150 T 17-10-2018 BJD13_22385 0e57d6f062b160ec324ba2228b00b28b 333 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 17-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD13_22385 0e57d6f062b160ec324ba2228b00b28b 333 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 314 5.1E-65 T 17-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD13_22385 0e57d6f062b160ec324ba2228b00b28b 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 270 285 5.2E-47 T 17-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD13_22385 0e57d6f062b160ec324ba2228b00b28b 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 230 247 5.2E-47 T 17-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD13_22385 0e57d6f062b160ec324ba2228b00b28b 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 5.2E-47 T 17-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD13_22385 0e57d6f062b160ec324ba2228b00b28b 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 5.2E-47 T 17-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD13_22385 0e57d6f062b160ec324ba2228b00b28b 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 111 124 5.2E-47 T 17-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD13_22385 0e57d6f062b160ec324ba2228b00b28b 333 Gene3D G3DSA:3.40.50.720 4 327 8.0E-150 T 17-10-2018 BJD13_22385 0e57d6f062b160ec324ba2228b00b28b 333 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 325 5.3E-134 T 17-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD13_22385 0e57d6f062b160ec324ba2228b00b28b 333 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 104 2.7E-39 T 17-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD13_13350 a45b1257fa24d6a17d9a3ec0ded4d67c 727 Pfam PF03572 Peptidase family S41 366 548 1.8E-52 T 17-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 BJD13_13350 a45b1257fa24d6a17d9a3ec0ded4d67c 727 SMART SM00228 247 325 2.2E-9 T 17-10-2018 IPR001478 PDZ domain GO:0005515 BJD13_13350 a45b1257fa24d6a17d9a3ec0ded4d67c 727 SMART SM00245 330 550 9.8E-52 T 17-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 BJD13_13350 a45b1257fa24d6a17d9a3ec0ded4d67c 727 SUPERFAMILY SSF52096 165 555 4.97E-68 T 17-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BJD13_13350 a45b1257fa24d6a17d9a3ec0ded4d67c 727 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 242 320 1.1E-13 T 17-10-2018 IPR001478 PDZ domain GO:0005515 BJD13_13350 a45b1257fa24d6a17d9a3ec0ded4d67c 727 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 207 569 8.1E-91 T 17-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 BJD13_13350 a45b1257fa24d6a17d9a3ec0ded4d67c 727 Gene3D G3DSA:2.30.42.10 237 322 4.5E-14 T 17-10-2018 BJD13_13350 a45b1257fa24d6a17d9a3ec0ded4d67c 727 Gene3D G3DSA:3.90.226.10 328 570 4.6E-60 T 17-10-2018 BJD13_13350 a45b1257fa24d6a17d9a3ec0ded4d67c 727 SUPERFAMILY SSF50156 230 342 2.11E-13 T 17-10-2018 IPR036034 PDZ superfamily GO:0005515 BJD13_13350 a45b1257fa24d6a17d9a3ec0ded4d67c 727 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 553 702 1.1E-38 T 17-10-2018 IPR020992 Tail specific protease, C-terminal BJD13_18670 339fa83ce4812a666df4e04153a811af 275 SUPERFAMILY SSF51069 50 271 1.67E-72 T 17-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily BJD13_18670 339fa83ce4812a666df4e04153a811af 275 Pfam PF00194 Eukaryotic-type carbonic anhydrase 51 269 4.3E-47 T 17-10-2018 IPR001148 Alpha carbonic anhydrase domain BJD13_18670 339fa83ce4812a666df4e04153a811af 275 SMART SM01057 52 275 1.5E-98 T 17-10-2018 IPR001148 Alpha carbonic anhydrase domain BJD13_18670 339fa83ce4812a666df4e04153a811af 275 Gene3D G3DSA:3.10.200.10 49 275 1.2E-73 T 17-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily BJD13_18670 339fa83ce4812a666df4e04153a811af 275 ProSitePatterns PS00162 Alpha-carbonic anhydrases signature. 141 157 - T 17-10-2018 IPR018338 Carbonic anhydrase, alpha-class, conserved site GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117|Reactome: R-HSA-1475029 BJD13_15930 5476d9ab6265c22c37449f64394c2381 575 SUPERFAMILY SSF52518 4 180 1.59E-42 T 17-10-2018 IPR029061 Thiamin diphosphate-binding fold BJD13_15930 5476d9ab6265c22c37449f64394c2381 575 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 193 321 8.2E-30 T 17-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 BJD13_15930 5476d9ab6265c22c37449f64394c2381 575 Gene3D G3DSA:3.40.50.970 3 179 1.0E-54 T 17-10-2018 BJD13_15930 5476d9ab6265c22c37449f64394c2381 575 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 6 172 2.2E-42 T 17-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 BJD13_15930 5476d9ab6265c22c37449f64394c2381 575 SUPERFAMILY SSF52467 184 352 3.07E-44 T 17-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily BJD13_15930 5476d9ab6265c22c37449f64394c2381 575 SUPERFAMILY SSF52518 360 564 3.58E-59 T 17-10-2018 IPR029061 Thiamin diphosphate-binding fold BJD13_15930 5476d9ab6265c22c37449f64394c2381 575 Gene3D G3DSA:3.40.50.970 354 575 1.2E-65 T 17-10-2018 BJD13_15930 5476d9ab6265c22c37449f64394c2381 575 Gene3D G3DSA:3.40.50.1220 181 335 1.7E-48 T 17-10-2018 BJD13_15930 5476d9ab6265c22c37449f64394c2381 575 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 420 439 - T 17-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 BJD13_15930 5476d9ab6265c22c37449f64394c2381 575 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 383 529 8.2E-39 T 17-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 BJD13_23170 270ffe264f356d8d00e3588b2f9cfafa 346 SUPERFAMILY SSF74653 234 344 8.44E-13 T 17-10-2018 BJD13_23170 270ffe264f356d8d00e3588b2f9cfafa 346 Gene3D G3DSA:3.30.1150.10 219 346 7.2E-16 T 17-10-2018 BJD13_23170 270ffe264f356d8d00e3588b2f9cfafa 346 TIGRFAM TIGR02794 tolA_full: protein TolA 18 340 7.6E-45 T 17-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 BJD13_23170 270ffe264f356d8d00e3588b2f9cfafa 346 Pfam PF13103 TonB C terminal 257 341 3.2E-8 T 17-10-2018 BJD13_09655 44e18923329a24b492f897a744df8047 156 Pfam PF04060 Putative Fe-S cluster 33 65 1.8E-14 T 17-10-2018 IPR007202 4Fe-4S domain GO:0051536 BJD13_09655 44e18923329a24b492f897a744df8047 156 Gene3D G3DSA:3.30.70.20 98 155 1.0E-12 T 17-10-2018 BJD13_09655 44e18923329a24b492f897a744df8047 156 SUPERFAMILY SSF54862 26 154 2.57E-26 T 17-10-2018 BJD13_09655 44e18923329a24b492f897a744df8047 156 Gene3D G3DSA:3.20.20.20 27 95 3.3E-14 T 17-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BJD13_09655 44e18923329a24b492f897a744df8047 156 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 16 155 8.2E-65 T 17-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 BJD13_09655 44e18923329a24b492f897a744df8047 156 Pfam PF14697 4Fe-4S dicluster domain 98 151 4.0E-15 T 17-10-2018 BJD13_09655 44e18923329a24b492f897a744df8047 156 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 135 146 - T 17-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BJD13_09655 44e18923329a24b492f897a744df8047 156 PIRSF PIRSF005784 1 156 8.2E-65 T 17-10-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 BJD13_03480 e4f08354a70c7b47a86a9561904dfdd8 693 Gene3D G3DSA:2.60.40.1180 589 693 1.3E-34 T 17-10-2018 IPR013780 Glycosyl hydrolase, all-beta BJD13_03480 e4f08354a70c7b47a86a9561904dfdd8 693 Gene3D G3DSA:2.70.98.10 40 281 1.6E-76 T 17-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 BJD13_03480 e4f08354a70c7b47a86a9561904dfdd8 693 Pfam PF14508 Glycosyl-hydrolase 97 N-terminal 42 288 7.0E-68 T 17-10-2018 IPR029486 Glycosyl-hydrolase 97, N-terminal domain BJD13_03480 e4f08354a70c7b47a86a9561904dfdd8 693 Pfam PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation 586 686 2.3E-28 T 17-10-2018 IPR029483 Glycosyl-hydrolase 97, C-terminal oligomerisation domain BJD13_03480 e4f08354a70c7b47a86a9561904dfdd8 693 SUPERFAMILY SSF51445 292 587 1.26E-8 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily BJD13_03480 e4f08354a70c7b47a86a9561904dfdd8 693 Gene3D G3DSA:3.20.20.70 282 588 4.0E-124 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD13_03480 e4f08354a70c7b47a86a9561904dfdd8 693 Pfam PF10566 Glycoside hydrolase 97 293 583 7.4E-113 T 17-10-2018 IPR019563 Glycosyl-hydrolase 97, catalytic domain BJD13_20605 9f0c50d670ffa877f0729a7f16387684 331 Gene3D G3DSA:3.20.20.100 1 330 2.9E-122 T 17-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BJD13_20605 9f0c50d670ffa877f0729a7f16387684 331 Pfam PF00248 Aldo/keto reductase family 17 310 3.7E-75 T 17-10-2018 IPR023210 NADP-dependent oxidoreductase domain BJD13_20605 9f0c50d670ffa877f0729a7f16387684 331 SUPERFAMILY SSF51430 1 313 5.76E-102 T 17-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BJD13_01705 dc131e0f0615a93f35e3a0e032d07d8c 353 Gene3D G3DSA:2.160.20.10 24 353 3.2E-100 T 17-10-2018 IPR012334 Pectin lyase fold BJD13_01705 dc131e0f0615a93f35e3a0e032d07d8c 353 Pfam PF00544 Pectate lyase 62 269 1.9E-46 T 17-10-2018 IPR002022 Pectate lyase BJD13_01705 dc131e0f0615a93f35e3a0e032d07d8c 353 SMART SM00656 39 275 2.3E-30 T 17-10-2018 IPR002022 Pectate lyase BJD13_01705 dc131e0f0615a93f35e3a0e032d07d8c 353 SUPERFAMILY SSF51126 24 350 5.66E-66 T 17-10-2018 IPR011050 Pectin lyase fold/virulence factor BJD13_05815 1059844f7c4321e81bd5744d5e9d955c 528 SUPERFAMILY SSF51905 15 526 3.46E-76 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_05815 1059844f7c4321e81bd5744d5e9d955c 528 Gene3D G3DSA:4.10.450.10 54 216 5.3E-162 T 17-10-2018 IPR027424 Glucose Oxidase, domain 2 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 BJD13_05815 1059844f7c4321e81bd5744d5e9d955c 528 SUPERFAMILY SSF54373 310 468 1.47E-29 T 17-10-2018 BJD13_05815 1059844f7c4321e81bd5744d5e9d955c 528 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 274 288 - T 17-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 BJD13_05815 1059844f7c4321e81bd5744d5e9d955c 528 Gene3D G3DSA:3.30.410.40 168 465 5.3E-162 T 17-10-2018 BJD13_05815 1059844f7c4321e81bd5744d5e9d955c 528 PIRSF PIRSF000137 323 528 9.5E-46 T 17-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 BJD13_05815 1059844f7c4321e81bd5744d5e9d955c 528 PIRSF PIRSF000137 9 342 6.2E-95 T 17-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 BJD13_05815 1059844f7c4321e81bd5744d5e9d955c 528 Gene3D G3DSA:3.50.50.60 20 522 5.3E-162 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_05815 1059844f7c4321e81bd5744d5e9d955c 528 Pfam PF05199 GMC oxidoreductase 384 518 1.8E-34 T 17-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 BJD13_05815 1059844f7c4321e81bd5744d5e9d955c 528 Pfam PF00732 GMC oxidoreductase 21 315 1.5E-70 T 17-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 BJD13_05815 1059844f7c4321e81bd5744d5e9d955c 528 Gene3D G3DSA:1.10.1220.110 112 167 5.3E-162 T 17-10-2018 BJD13_06830 b9f691725a9d91b8f264f8c964f01542 725 Gene3D G3DSA:1.20.120.1530 212 357 3.1E-22 T 17-10-2018 BJD13_06830 b9f691725a9d91b8f264f8c964f01542 725 SMART SM00304 400 452 35.0 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_06830 b9f691725a9d91b8f264f8c964f01542 725 SMART SM00304 220 272 2.0E-5 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_06830 b9f691725a9d91b8f264f8c964f01542 725 Gene3D G3DSA:3.30.450.20 45 193 7.5E-49 T 17-10-2018 BJD13_06830 b9f691725a9d91b8f264f8c964f01542 725 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 628 657 1.8E-57 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD13_06830 b9f691725a9d91b8f264f8c964f01542 725 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 474 503 1.8E-57 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD13_06830 b9f691725a9d91b8f264f8c964f01542 725 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 551 578 1.8E-57 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD13_06830 b9f691725a9d91b8f264f8c964f01542 725 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 580 609 1.8E-57 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD13_06830 b9f691725a9d91b8f264f8c964f01542 725 SMART SM01049 43 138 2.5E-30 T 17-10-2018 IPR033480 Single Cache domain 2 BJD13_06830 b9f691725a9d91b8f264f8c964f01542 725 Pfam PF17200 Single Cache domain 2 46 193 3.5E-41 T 17-10-2018 IPR033480 Single Cache domain 2 BJD13_06830 b9f691725a9d91b8f264f8c964f01542 725 SUPERFAMILY SSF158472 221 269 3.14E-7 T 17-10-2018 BJD13_06830 b9f691725a9d91b8f264f8c964f01542 725 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 513 666 1.2E-54 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD13_06830 b9f691725a9d91b8f264f8c964f01542 725 SMART SM00283 453 700 1.7E-89 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD13_06830 b9f691725a9d91b8f264f8c964f01542 725 Gene3D G3DSA:1.10.287.950 402 702 9.4E-88 T 17-10-2018 BJD13_06830 b9f691725a9d91b8f264f8c964f01542 725 SUPERFAMILY SSF58104 420 704 1.57E-72 T 17-10-2018 BJD13_08425 bf3e86b9eb237ea91ffd44ab01dede84 822 Gene3D G3DSA:2.140.10.10 179 550 6.8E-120 T 17-10-2018 BJD13_08425 bf3e86b9eb237ea91ffd44ab01dede84 822 Pfam PF13360 PQQ-like domain 224 397 1.7E-7 T 17-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat BJD13_08425 bf3e86b9eb237ea91ffd44ab01dede84 822 Pfam PF13360 PQQ-like domain 696 795 1.4E-6 T 17-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat BJD13_08425 bf3e86b9eb237ea91ffd44ab01dede84 822 SUPERFAMILY SSF50998 182 818 2.88E-145 T 17-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily BJD13_08425 bf3e86b9eb237ea91ffd44ab01dede84 822 SMART SM00564 358 399 130.0 T 17-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BJD13_08425 bf3e86b9eb237ea91ffd44ab01dede84 822 SMART SM00564 302 343 540.0 T 17-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BJD13_08425 bf3e86b9eb237ea91ffd44ab01dede84 822 SMART SM00564 674 713 840.0 T 17-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BJD13_08425 bf3e86b9eb237ea91ffd44ab01dede84 822 SMART SM00564 741 774 0.0037 T 17-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BJD13_08425 bf3e86b9eb237ea91ffd44ab01dede84 822 SMART SM00564 236 267 4.3E-5 T 17-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BJD13_08425 bf3e86b9eb237ea91ffd44ab01dede84 822 Gene3D G3DSA:2.140.10.10 579 819 5.5E-36 T 17-10-2018 BJD13_08425 bf3e86b9eb237ea91ffd44ab01dede84 822 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 18 818 0.0 T 17-10-2018 IPR017511 PQQ-dependent membrane bound dehydrogenase GO:0016021|GO:0016614|GO:0048038|GO:0055114 BJD13_09365 8bbd09c993379502b3c403b15096365a 747 Gene3D G3DSA:1.10.268.10 373 458 1.3E-171 T 17-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 BJD13_09365 8bbd09c993379502b3c403b15096365a 747 Gene3D G3DSA:3.30.1360.40 242 335 1.3E-171 T 17-10-2018 BJD13_09365 8bbd09c993379502b3c403b15096365a 747 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 36 472 1.3E-132 T 17-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BJD13_09365 8bbd09c993379502b3c403b15096365a 747 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 13 743 0.0 T 17-10-2018 BJD13_09365 8bbd09c993379502b3c403b15096365a 747 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 8 745 33.788 T 17-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BJD13_09365 8bbd09c993379502b3c403b15096365a 747 Gene3D G3DSA:2.120.10.90 499 717 2.3E-14 T 17-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal BJD13_09365 8bbd09c993379502b3c403b15096365a 747 Gene3D G3DSA:3.90.199.10 36 485 1.3E-171 T 17-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 BJD13_09365 8bbd09c993379502b3c403b15096365a 747 SUPERFAMILY SSF56719 35 487 7.98E-151 T 17-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 BJD13_09365 8bbd09c993379502b3c403b15096365a 747 SMART SM00434 15 465 1.4E-220 T 17-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BJD13_09365 8bbd09c993379502b3c403b15096365a 747 SUPERFAMILY SSF101904 501 743 3.79E-46 T 17-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal BJD13_09365 8bbd09c993379502b3c403b15096365a 747 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 602 639 0.1 T 17-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BJD13_09365 8bbd09c993379502b3c403b15096365a 747 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 649 698 1.0E-5 T 17-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BJD13_17910 6dccd29d5ae73c77d376301aa0c16135 529 Gene3D G3DSA:1.25.40.10 10 86 1.9E-5 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_17910 6dccd29d5ae73c77d376301aa0c16135 529 Gene3D G3DSA:1.25.40.10 91 209 3.0E-9 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_17910 6dccd29d5ae73c77d376301aa0c16135 529 SUPERFAMILY SSF52540 281 507 1.76E-42 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_17910 6dccd29d5ae73c77d376301aa0c16135 529 Pfam PF13469 Sulfotransferase family 283 471 3.6E-42 T 17-10-2018 BJD13_17910 6dccd29d5ae73c77d376301aa0c16135 529 Gene3D G3DSA:3.40.50.300 275 526 5.9E-50 T 17-10-2018 BJD13_17910 6dccd29d5ae73c77d376301aa0c16135 529 SUPERFAMILY SSF48452 9 176 2.85E-13 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_08840 21418ecba826db4b22e794ba2c9d0f48 328 SUPERFAMILY SSF53613 5 324 9.82E-79 T 17-10-2018 IPR029056 Ribokinase-like BJD13_08840 21418ecba826db4b22e794ba2c9d0f48 328 Pfam PF00294 pfkB family carbohydrate kinase 6 315 2.6E-66 T 17-10-2018 IPR011611 Carbohydrate kinase PfkB BJD13_08840 21418ecba826db4b22e794ba2c9d0f48 328 Gene3D G3DSA:3.40.1190.20 2 328 5.4E-120 T 17-10-2018 IPR029056 Ribokinase-like BJD13_08840 21418ecba826db4b22e794ba2c9d0f48 328 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 37 61 - T 17-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 BJD13_08840 21418ecba826db4b22e794ba2c9d0f48 328 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 257 270 - T 17-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 BJD13_01605 537d88130c1b5f59c2cc13dc663c146e 669 SUPERFAMILY SSF55486 346 571 1.18E-38 T 17-10-2018 BJD13_01605 537d88130c1b5f59c2cc13dc663c146e 669 Gene3D G3DSA:1.10.390.60 343 572 6.8E-29 T 17-10-2018 BJD13_01605 537d88130c1b5f59c2cc13dc663c146e 669 Pfam PF01433 Peptidase family M1 domain 413 568 8.8E-14 T 17-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 BJD13_14280 f36ed8c21620b69643578e661419091a 210 Pfam PF01553 Acyltransferase 29 152 7.1E-15 T 17-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 BJD13_14280 f36ed8c21620b69643578e661419091a 210 SUPERFAMILY SSF69593 18 202 5.23E-30 T 17-10-2018 BJD13_14280 f36ed8c21620b69643578e661419091a 210 SMART SM00563 34 155 2.8E-13 T 17-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 BJD13_11430 e4ba7c9d6f73ef76db44eb38c3e71463 244 Pfam PF00929 Exonuclease 4 166 1.9E-31 T 17-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BJD13_11430 e4ba7c9d6f73ef76db44eb38c3e71463 244 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 2 234 1.2E-92 T 17-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD13_11430 e4ba7c9d6f73ef76db44eb38c3e71463 244 SUPERFAMILY SSF53098 1 176 1.36E-49 T 17-10-2018 IPR012337 Ribonuclease H-like superfamily BJD13_11430 e4ba7c9d6f73ef76db44eb38c3e71463 244 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 5 186 4.7E-56 T 17-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD13_11430 e4ba7c9d6f73ef76db44eb38c3e71463 244 SMART SM00479 2 175 3.7E-42 T 17-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BJD13_11430 e4ba7c9d6f73ef76db44eb38c3e71463 244 Gene3D G3DSA:3.30.420.10 1 181 1.7E-50 T 17-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BJD13_07925 e53c16832c68d974fd86a07ef396d613 92 Gene3D G3DSA:2.30.30.100 1 70 9.4E-33 T 17-10-2018 BJD13_07925 e53c16832c68d974fd86a07ef396d613 92 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.333 T 17-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 BJD13_07925 e53c16832c68d974fd86a07ef396d613 92 Pfam PF17209 Hfq protein 7 68 8.1E-31 T 17-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 BJD13_07925 e53c16832c68d974fd86a07ef396d613 92 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 9.7E-30 T 17-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 BJD13_07925 e53c16832c68d974fd86a07ef396d613 92 SUPERFAMILY SSF50182 7 68 6.93E-24 T 17-10-2018 IPR010920 LSM domain superfamily BJD13_04870 7d6bde629798036d68f40841226e2b5c 1045 Gene3D G3DSA:2.60.120.260 180 297 9.3E-17 T 17-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD13_04870 7d6bde629798036d68f40841226e2b5c 1045 Gene3D G3DSA:2.60.120.260 12 174 1.8E-7 T 17-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD13_04870 7d6bde629798036d68f40841226e2b5c 1045 Gene3D G3DSA:1.50.10.10 612 922 6.7E-22 T 17-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 BJD13_04870 7d6bde629798036d68f40841226e2b5c 1045 Pfam PF00754 F5/8 type C domain 190 291 9.4E-15 T 17-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain BJD13_04870 7d6bde629798036d68f40841226e2b5c 1045 SUPERFAMILY SSF49785 177 287 7.8E-15 T 17-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD13_04870 7d6bde629798036d68f40841226e2b5c 1045 SUPERFAMILY SSF48208 549 977 3.19E-47 T 17-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 BJD13_04870 7d6bde629798036d68f40841226e2b5c 1045 SUPERFAMILY SSF49785 16 170 9.57E-20 T 17-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD13_04870 7d6bde629798036d68f40841226e2b5c 1045 Pfam PF06202 Amylo-alpha-1,6-glucosidase 601 701 9.3E-5 T 17-10-2018 IPR032790 Glycogen debranching enzyme, C-terminal KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-6798695|Reactome: R-HSA-70221 BJD13_13045 2a6e51ae151a17587fa71f5338cbb8c8 191 PIRSF PIRSF033318 2 191 6.8E-107 T 17-10-2018 IPR014185 Glutathione-dependent formaldehyde-activating enzyme GO:0008270|GO:0046294|GO:0051907 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 BJD13_13045 2a6e51ae151a17587fa71f5338cbb8c8 191 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 49 115 4.0E-10 T 17-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 BJD13_13045 2a6e51ae151a17587fa71f5338cbb8c8 191 TIGRFAM TIGR02820 formald_GSH: S-(hydroxymethyl)glutathione synthase 6 187 5.7E-104 T 17-10-2018 IPR014185 Glutathione-dependent formaldehyde-activating enzyme GO:0008270|GO:0046294|GO:0051907 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 BJD13_13045 2a6e51ae151a17587fa71f5338cbb8c8 191 SUPERFAMILY SSF51316 3 190 7.64E-54 T 17-10-2018 IPR011057 Mss4-like superfamily BJD13_13045 2a6e51ae151a17587fa71f5338cbb8c8 191 Gene3D G3DSA:3.90.1590.10 1 191 1.1E-92 T 17-10-2018 BJD13_13045 2a6e51ae151a17587fa71f5338cbb8c8 191 Hamap MF_00723 Glutathione-dependent formaldehyde-activating enzyme [gfa]. 1 191 127.725 T 17-10-2018 IPR014185 Glutathione-dependent formaldehyde-activating enzyme GO:0008270|GO:0046294|GO:0051907 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 BJD13_01615 040f2bdb3e43f5731a83144aec9ddcac 1052 Pfam PF07715 TonB-dependent Receptor Plug Domain 68 186 2.3E-14 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_01615 040f2bdb3e43f5731a83144aec9ddcac 1052 Gene3D G3DSA:2.170.130.10 40 192 2.1E-15 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_01615 040f2bdb3e43f5731a83144aec9ddcac 1052 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 49 1052 3.2E-272 T 17-10-2018 IPR010104 Bacterial TonB-dependent receptor BJD13_01615 040f2bdb3e43f5731a83144aec9ddcac 1052 Pfam PF00593 TonB dependent receptor 479 1050 2.4E-32 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_01615 040f2bdb3e43f5731a83144aec9ddcac 1052 SUPERFAMILY SSF56935 38 1052 7.91E-86 T 17-10-2018 BJD13_17815 728f8532a08b5720b2b4d9c33559f946 357 SMART SM00354 14 84 1.7E-26 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD13_17815 728f8532a08b5720b2b4d9c33559f946 357 SUPERFAMILY SSF47413 14 72 6.57E-17 T 17-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BJD13_17815 728f8532a08b5720b2b4d9c33559f946 357 Gene3D G3DSA:3.40.50.2300 68 320 4.0E-68 T 17-10-2018 BJD13_17815 728f8532a08b5720b2b4d9c33559f946 357 Gene3D G3DSA:1.10.260.40 6 67 1.2E-20 T 17-10-2018 BJD13_17815 728f8532a08b5720b2b4d9c33559f946 357 Gene3D G3DSA:3.40.50.2300 174 303 4.0E-68 T 17-10-2018 BJD13_17815 728f8532a08b5720b2b4d9c33559f946 357 SUPERFAMILY SSF53822 75 349 2.19E-67 T 17-10-2018 IPR028082 Periplasmic binding protein-like I BJD13_17815 728f8532a08b5720b2b4d9c33559f946 357 Pfam PF00356 Bacterial regulatory proteins, lacI family 16 61 4.0E-19 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD13_17815 728f8532a08b5720b2b4d9c33559f946 357 Pfam PF13377 Periplasmic binding protein-like domain 182 345 1.2E-37 T 17-10-2018 BJD13_17815 728f8532a08b5720b2b4d9c33559f946 357 ProSitePatterns PS00356 LacI-type HTH domain signature. 17 35 - T 17-10-2018 BJD13_06870 976192f6d7be4d6d288b8098d88f290a 749 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 508 662 8.2E-52 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD13_06870 976192f6d7be4d6d288b8098d88f290a 749 Gene3D G3DSA:1.20.120.1530 207 352 1.9E-25 T 17-10-2018 BJD13_06870 976192f6d7be4d6d288b8098d88f290a 749 Pfam PF12729 Four helix bundle sensory module for signal transduction 9 186 1.3E-13 T 17-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain BJD13_06870 976192f6d7be4d6d288b8098d88f290a 749 Gene3D G3DSA:1.10.287.950 398 697 5.9E-84 T 17-10-2018 BJD13_06870 976192f6d7be4d6d288b8098d88f290a 749 SUPERFAMILY SSF158472 215 264 1.96E-8 T 17-10-2018 BJD13_06870 976192f6d7be4d6d288b8098d88f290a 749 SUPERFAMILY SSF58104 415 699 7.32E-70 T 17-10-2018 BJD13_06870 976192f6d7be4d6d288b8098d88f290a 749 SMART SM00283 448 695 2.4E-90 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD13_06870 976192f6d7be4d6d288b8098d88f290a 749 SMART SM00304 215 267 4.1E-6 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_11435 cd464929e7990d0c14039b55af8620dc 150 SUPERFAMILY SSF53098 2 138 3.67E-54 T 17-10-2018 IPR012337 Ribonuclease H-like superfamily BJD13_11435 cd464929e7990d0c14039b55af8620dc 150 Hamap MF_00042 Ribonuclease H [rnhA]. 1 149 36.438 T 17-10-2018 IPR022892 Ribonuclease HI GO:0004523 BJD13_11435 cd464929e7990d0c14039b55af8620dc 150 Gene3D G3DSA:3.30.420.10 1 146 1.1E-57 T 17-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BJD13_11435 cd464929e7990d0c14039b55af8620dc 150 Pfam PF00075 RNase H 2 140 2.6E-46 T 17-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 BJD13_10375 9bbe9e3c52dd7bca16c16a716880e6e6 350 Gene3D G3DSA:2.40.30.30 187 321 1.0E-40 T 17-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 BJD13_10375 9bbe9e3c52dd7bca16c16a716880e6e6 350 SUPERFAMILY SSF52374 17 176 3.66E-27 T 17-10-2018 BJD13_10375 9bbe9e3c52dd7bca16c16a716880e6e6 350 Pfam PF01687 Riboflavin kinase 185 306 1.3E-35 T 17-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 BJD13_10375 9bbe9e3c52dd7bca16c16a716880e6e6 350 Pfam PF06574 FAD synthetase 15 168 4.6E-44 T 17-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 BJD13_10375 9bbe9e3c52dd7bca16c16a716880e6e6 350 PIRSF PIRSF004491 7 314 5.7E-90 T 17-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 BJD13_10375 9bbe9e3c52dd7bca16c16a716880e6e6 350 Gene3D G3DSA:3.40.50.620 9 186 3.3E-50 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD13_10375 9bbe9e3c52dd7bca16c16a716880e6e6 350 SMART SM00904 184 307 1.9E-59 T 17-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 BJD13_10375 9bbe9e3c52dd7bca16c16a716880e6e6 350 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 20 306 1.8E-74 T 17-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 BJD13_10375 9bbe9e3c52dd7bca16c16a716880e6e6 350 SUPERFAMILY SSF82114 176 309 1.18E-42 T 17-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 BJD13_20850 14f467a893b95bbbe10e86ad672d8185 254 Pfam PF11101 Protein of unknown function (DUF2884) 33 246 4.0E-40 T 17-10-2018 IPR021307 Protein of unknown function DUF2884 BJD13_10475 6943163e4d975a63d590ac0426752c57 289 Gene3D G3DSA:3.30.479.30 93 224 1.2E-12 T 17-10-2018 BJD13_10475 6943163e4d975a63d590ac0426752c57 289 Pfam PF01145 SPFH domain / Band 7 family 62 231 2.5E-25 T 17-10-2018 IPR001107 Band 7 domain BJD13_10475 6943163e4d975a63d590ac0426752c57 289 SMART SM00244 58 222 2.4E-10 T 17-10-2018 IPR001107 Band 7 domain BJD13_10475 6943163e4d975a63d590ac0426752c57 289 SUPERFAMILY SSF117892 96 224 6.8E-13 T 17-10-2018 IPR036013 Band 7/SPFH domain superfamily BJD13_22140 16a9cc664a735e863dfc4d13003a673f 441 Gene3D G3DSA:3.90.230.10 159 438 5.6E-72 T 17-10-2018 BJD13_22140 16a9cc664a735e863dfc4d13003a673f 441 SUPERFAMILY SSF55920 161 435 3.01E-53 T 17-10-2018 IPR036005 Creatinase/aminopeptidase-like BJD13_22140 16a9cc664a735e863dfc4d13003a673f 441 Hamap MF_01279 Xaa-Pro dipeptidase [pepQ]. 3 440 55.093 T 17-10-2018 IPR022846 Xaa-Pro dipeptidase GO:0016795 BJD13_22140 16a9cc664a735e863dfc4d13003a673f 441 Pfam PF00557 Metallopeptidase family M24 167 427 3.2E-41 T 17-10-2018 IPR000994 Peptidase M24 BJD13_22140 16a9cc664a735e863dfc4d13003a673f 441 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 332 344 - T 17-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site BJD13_22140 16a9cc664a735e863dfc4d13003a673f 441 Gene3D G3DSA:3.40.350.10 4 157 5.8E-53 T 17-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal BJD13_18865 894c5bd41345333bb51f1198c5f9fb64 844 Pfam PF03929 PepSY-associated TM region 7 359 7.8E-62 T 17-10-2018 IPR005625 PepSY-associated TM protein BJD13_18865 894c5bd41345333bb51f1198c5f9fb64 844 SUPERFAMILY SSF52218 383 528 1.19E-38 T 17-10-2018 IPR029039 Flavoprotein-like superfamily BJD13_18865 894c5bd41345333bb51f1198c5f9fb64 844 Pfam PF00258 Flavodoxin 387 510 2.0E-24 T 17-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 BJD13_18865 894c5bd41345333bb51f1198c5f9fb64 844 SUPERFAMILY SSF63380 532 704 2.51E-18 T 17-10-2018 IPR017938 Riboflavin synthase-like beta-barrel BJD13_18865 894c5bd41345333bb51f1198c5f9fb64 844 Pfam PF00175 Oxidoreductase NAD-binding domain 713 817 5.8E-8 T 17-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 BJD13_18865 894c5bd41345333bb51f1198c5f9fb64 844 SUPERFAMILY SSF52343 707 844 1.31E-33 T 17-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BJD13_18865 894c5bd41345333bb51f1198c5f9fb64 844 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 780 796 7.9E-7 T 17-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BJD13_18865 894c5bd41345333bb51f1198c5f9fb64 844 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 803 811 7.9E-7 T 17-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BJD13_18865 894c5bd41345333bb51f1198c5f9fb64 844 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 712 731 7.9E-7 T 17-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BJD13_18865 894c5bd41345333bb51f1198c5f9fb64 844 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 749 760 7.9E-7 T 17-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BJD13_18865 894c5bd41345333bb51f1198c5f9fb64 844 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 649 656 7.9E-7 T 17-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BJD13_18865 894c5bd41345333bb51f1198c5f9fb64 844 Gene3D G3DSA:3.40.50.80 704 844 1.0E-35 T 17-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BJD13_18865 894c5bd41345333bb51f1198c5f9fb64 844 PRINTS PR00369 Flavodoxin signature 434 445 4.4E-9 T 17-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BJD13_18865 894c5bd41345333bb51f1198c5f9fb64 844 PRINTS PR00369 Flavodoxin signature 489 508 4.4E-9 T 17-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BJD13_18865 894c5bd41345333bb51f1198c5f9fb64 844 PRINTS PR00369 Flavodoxin signature 465 475 4.4E-9 T 17-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BJD13_18865 894c5bd41345333bb51f1198c5f9fb64 844 PRINTS PR00369 Flavodoxin signature 386 399 4.4E-9 T 17-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BJD13_18865 894c5bd41345333bb51f1198c5f9fb64 844 Gene3D G3DSA:3.40.50.360 375 532 2.8E-37 T 17-10-2018 IPR029039 Flavoprotein-like superfamily BJD13_18865 894c5bd41345333bb51f1198c5f9fb64 844 Gene3D G3DSA:1.20.990.10 540 650 4.2E-5 T 17-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 BJD13_06580 46254a29a024bf1bad21c40b208a147a 206 Gene3D G3DSA:3.30.2320.30 118 202 6.9E-5 T 17-10-2018 IPR038495 V-type ATPase subunit E, C-terminal domain superfamily Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 BJD13_06580 46254a29a024bf1bad21c40b208a147a 206 Pfam PF02108 Flagellar assembly protein FliH 73 193 2.8E-20 T 17-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE BJD13_04660 ec4b768b49029ff0b318f58ba8dd78b6 447 Pfam PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase 276 439 9.5E-55 T 17-10-2018 IPR006855 Vertebrate-like NAGS Gcn5-related N-acetyltransferase (GNAT) domain KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|Reactome: R-HSA-70635 BJD13_04660 ec4b768b49029ff0b318f58ba8dd78b6 447 PIRSF PIRSF036441 22 447 8.3E-291 T 17-10-2018 IPR011242 Acetylglutamate kinase ArgB, GNAT domain-containing GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BJD13_04660 ec4b768b49029ff0b318f58ba8dd78b6 447 Gene3D G3DSA:3.40.630.30 297 447 3.6E-55 T 17-10-2018 BJD13_04660 ec4b768b49029ff0b318f58ba8dd78b6 447 SUPERFAMILY SSF55729 305 402 1.06E-5 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD13_04660 ec4b768b49029ff0b318f58ba8dd78b6 447 Gene3D G3DSA:3.40.1160.10 2 296 1.0E-96 T 17-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BJD13_04660 ec4b768b49029ff0b318f58ba8dd78b6 447 TIGRFAM TIGR00761 argB: acetylglutamate kinase 43 264 1.3E-61 T 17-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BJD13_04660 ec4b768b49029ff0b318f58ba8dd78b6 447 SUPERFAMILY SSF53633 16 294 6.0E-54 T 17-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BJD13_04660 ec4b768b49029ff0b318f58ba8dd78b6 447 Pfam PF00696 Amino acid kinase family 44 259 5.7E-31 T 17-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 BJD13_16705 f16205b916fa5e4c75a5589679a6f2a9 85 SUPERFAMILY SSF143120 1 74 4.58E-12 T 17-10-2018 IPR036165 YefM-like superfamily BJD13_16705 f16205b916fa5e4c75a5589679a6f2a9 85 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 5 56 1.7E-12 T 17-10-2018 BJD13_16705 f16205b916fa5e4c75a5589679a6f2a9 85 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 73 1.0E-10 T 17-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM BJD13_20435 10d0a3dfefd6dca9835bcf05f1990051 60 Pfam PF12244 Protein of unknown function (DUF3606) 6 56 4.1E-17 T 17-10-2018 IPR022037 Protein of unknown function DUF3606 BJD13_09285 afe82b2b93bd3edfdf8a4b3859467fef 166 Pfam PF01047 MarR family 52 111 4.9E-14 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD13_09285 afe82b2b93bd3edfdf8a4b3859467fef 166 SUPERFAMILY SSF46785 21 160 2.07E-28 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_09285 afe82b2b93bd3edfdf8a4b3859467fef 166 Gene3D G3DSA:1.10.10.10 12 162 1.5E-29 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_09285 afe82b2b93bd3edfdf8a4b3859467fef 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 107 123 2.5E-11 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD13_09285 afe82b2b93bd3edfdf8a4b3859467fef 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 103 2.5E-11 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD13_09285 afe82b2b93bd3edfdf8a4b3859467fef 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 137 157 2.5E-11 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD13_09285 afe82b2b93bd3edfdf8a4b3859467fef 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 71 87 2.5E-11 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD13_09285 afe82b2b93bd3edfdf8a4b3859467fef 166 SMART SM00347 45 147 1.1E-21 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD13_19075 865c2f1257e96783b246a62e4fd920bf 371 Pfam PF12697 Alpha/beta hydrolase family 112 322 1.4E-15 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD13_19075 865c2f1257e96783b246a62e4fd920bf 371 SUPERFAMILY SSF53474 103 343 2.43E-38 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_19075 865c2f1257e96783b246a62e4fd920bf 371 Gene3D G3DSA:3.40.50.1820 84 339 5.3E-37 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_22180 499cbeca4b73661fd01dab36ed5919ec 203 Gene3D G3DSA:3.30.63.10 34 93 3.7E-63 T 17-10-2018 BJD13_22180 499cbeca4b73661fd01dab36ed5919ec 203 Pfam PF00625 Guanylate kinase 4 180 4.6E-46 T 17-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit BJD13_22180 499cbeca4b73661fd01dab36ed5919ec 203 ProSitePatterns PS00856 Guanylate kinase-like signature. 37 54 - T 17-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 BJD13_22180 499cbeca4b73661fd01dab36ed5919ec 203 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 3 181 6.3E-70 T 17-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 BJD13_22180 499cbeca4b73661fd01dab36ed5919ec 203 Hamap MF_00328 Guanylate kinase [gmk]. 1 184 35.46 T 17-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 BJD13_22180 499cbeca4b73661fd01dab36ed5919ec 203 SUPERFAMILY SSF52540 2 187 7.47E-60 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_22180 499cbeca4b73661fd01dab36ed5919ec 203 SMART SM00072 2 184 1.9E-56 T 17-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit BJD13_22180 499cbeca4b73661fd01dab36ed5919ec 203 Gene3D G3DSA:3.40.50.300 7 180 3.7E-63 T 17-10-2018 BJD13_05960 84324cf96c23d03c6b94fecf12e712da 168 PIRSF PIRSF028301 2 168 3.7E-54 T 17-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 BJD13_05960 84324cf96c23d03c6b94fecf12e712da 168 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 12 161 1.9E-52 T 17-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 BJD13_05960 84324cf96c23d03c6b94fecf12e712da 168 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 8 164 9.7E-52 T 17-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 BJD13_23040 24084a213538c916c2f36ed52b7dabe7 638 Pfam PF12848 ABC transporter 217 297 5.6E-23 T 17-10-2018 IPR032781 ABC-transporter extension domain BJD13_23040 24084a213538c916c2f36ed52b7dabe7 638 Pfam PF00005 ABC transporter 348 479 2.0E-21 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD13_23040 24084a213538c916c2f36ed52b7dabe7 638 Gene3D G3DSA:3.40.50.300 275 556 1.3E-47 T 17-10-2018 BJD13_23040 24084a213538c916c2f36ed52b7dabe7 638 Gene3D G3DSA:3.40.50.300 1 259 9.9E-59 T 17-10-2018 BJD13_23040 24084a213538c916c2f36ed52b7dabe7 638 SUPERFAMILY SSF52540 2 239 8.38E-44 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_23040 24084a213538c916c2f36ed52b7dabe7 638 Pfam PF00005 ABC transporter 17 178 1.3E-21 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD13_23040 24084a213538c916c2f36ed52b7dabe7 638 ProSitePatterns PS00211 ABC transporters family signature. 451 465 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD13_23040 24084a213538c916c2f36ed52b7dabe7 638 Pfam PF16326 ABC transporter C-terminal domain 576 634 1.4E-9 T 17-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 BJD13_23040 24084a213538c916c2f36ed52b7dabe7 638 SMART SM00382 26 223 5.8E-8 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_23040 24084a213538c916c2f36ed52b7dabe7 638 SMART SM00382 357 531 3.7E-13 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_23040 24084a213538c916c2f36ed52b7dabe7 638 SUPERFAMILY SSF52540 343 528 2.88E-40 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_23040 24084a213538c916c2f36ed52b7dabe7 638 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD13_02760 316b36f54ab9a941b16ed92ae836b71a 244 Gene3D G3DSA:3.30.70.2970 51 158 4.0E-68 T 17-10-2018 BJD13_02760 316b36f54ab9a941b16ed92ae836b71a 244 Gene3D G3DSA:3.30.110.170 41 241 4.0E-68 T 17-10-2018 BJD13_02760 316b36f54ab9a941b16ed92ae836b71a 244 Pfam PF04402 Protein of unknown function (DUF541) 40 240 4.7E-54 T 17-10-2018 IPR007497 Protein of unknown function DUF541 BJD13_10540 63310ffe5320322fd4542cb214187d53 85 Pfam PF03776 Septum formation topological specificity factor MinE 13 80 3.9E-21 T 17-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 BJD13_10540 63310ffe5320322fd4542cb214187d53 85 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 81 3.0E-27 T 17-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 BJD13_10540 63310ffe5320322fd4542cb214187d53 85 SUPERFAMILY SSF55229 31 82 1.1E-13 T 17-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 BJD13_10540 63310ffe5320322fd4542cb214187d53 85 Gene3D G3DSA:3.30.1070.10 1 81 4.2E-25 T 17-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 BJD13_10540 63310ffe5320322fd4542cb214187d53 85 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 82 17.262 T 17-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 BJD13_11850 4fe6ebe625f2afc752ad2ff947827266 132 ProSitePatterns PS00053 Ribosomal protein S8 signature. 102 119 - T 17-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_11850 4fe6ebe625f2afc752ad2ff947827266 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 30.386 T 17-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_11850 4fe6ebe625f2afc752ad2ff947827266 132 Gene3D G3DSA:3.30.1370.30 2 74 5.3E-26 T 17-10-2018 BJD13_11850 4fe6ebe625f2afc752ad2ff947827266 132 SUPERFAMILY SSF56047 2 131 2.35E-43 T 17-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_11850 4fe6ebe625f2afc752ad2ff947827266 132 Gene3D G3DSA:3.30.1490.10 76 131 4.4E-22 T 17-10-2018 BJD13_11850 4fe6ebe625f2afc752ad2ff947827266 132 Pfam PF00410 Ribosomal protein S8 5 131 1.5E-46 T 17-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_14210 31592b4373cd5642ff719f928001be82 148 Pfam PF01220 Dehydroquinase class II 4 140 9.7E-58 T 17-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 BJD13_14210 31592b4373cd5642ff719f928001be82 148 SUPERFAMILY SSF52304 3 145 1.44E-59 T 17-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 BJD13_14210 31592b4373cd5642ff719f928001be82 148 Gene3D G3DSA:3.40.50.9100 1 148 1.1E-62 T 17-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 BJD13_14210 31592b4373cd5642ff719f928001be82 148 PIRSF PIRSF001399 1 147 1.8E-56 T 17-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 BJD13_14210 31592b4373cd5642ff719f928001be82 148 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 148 72.351 T 17-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 BJD13_14210 31592b4373cd5642ff719f928001be82 148 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 18 142 2.0E-67 T 17-10-2018 BJD13_14210 31592b4373cd5642ff719f928001be82 148 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 4 142 2.1E-55 T 17-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 BJD13_14210 31592b4373cd5642ff719f928001be82 148 ProSitePatterns PS01029 Dehydroquinase class II signature. 7 24 - T 17-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 BJD13_09525 a65b0c9cdba1df96fcf2b3975bc81ad8 428 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 32 407 4.9E-112 T 17-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 BJD13_09525 a65b0c9cdba1df96fcf2b3975bc81ad8 428 Pfam PF02684 Lipid-A-disaccharide synthetase 36 385 4.0E-111 T 17-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 BJD13_09525 a65b0c9cdba1df96fcf2b3975bc81ad8 428 SUPERFAMILY SSF53756 35 408 5.93E-32 T 17-10-2018 BJD13_09525 a65b0c9cdba1df96fcf2b3975bc81ad8 428 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 33 412 41.606 T 17-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 BJD13_22775 9e06cf903c5083c593e09b1a66b531ee 551 Gene3D G3DSA:3.60.110.10 5 259 1.6E-81 T 17-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily BJD13_22775 9e06cf903c5083c593e09b1a66b531ee 551 Pfam PF00795 Carbon-nitrogen hydrolase 12 241 1.0E-22 T 17-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 BJD13_22775 9e06cf903c5083c593e09b1a66b531ee 551 PIRSF PIRSF006630 251 551 5.4E-112 T 17-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 BJD13_22775 9e06cf903c5083c593e09b1a66b531ee 551 PIRSF PIRSF006630 7 260 1.2E-69 T 17-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 BJD13_22775 9e06cf903c5083c593e09b1a66b531ee 551 SUPERFAMILY SSF56317 9 250 1.22E-57 T 17-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily BJD13_22775 9e06cf903c5083c593e09b1a66b531ee 551 Hamap MF_02090 Glutamine-dependent NAD(+) synthetase [nadE]. 10 550 28.801 T 17-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 BJD13_22775 9e06cf903c5083c593e09b1a66b531ee 551 TIGRFAM TIGR00552 nadE: NAD+ synthetase 282 531 1.3E-57 T 17-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 BJD13_22775 9e06cf903c5083c593e09b1a66b531ee 551 SUPERFAMILY SSF52402 274 533 1.74E-75 T 17-10-2018 BJD13_22775 9e06cf903c5083c593e09b1a66b531ee 551 Gene3D G3DSA:3.40.50.620 273 551 8.9E-112 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD13_22775 9e06cf903c5083c593e09b1a66b531ee 551 Pfam PF02540 NAD synthase 275 524 4.9E-69 T 17-10-2018 IPR022310 NAD/GMP synthase BJD13_07375 0b8aaf581083cbb2c8c5026531f6f9e0 738 ProSitePatterns PS00211 ABC transporters family signature. 639 653 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD13_07375 0b8aaf581083cbb2c8c5026531f6f9e0 738 Pfam PF00664 ABC transporter transmembrane region 189 454 1.0E-31 T 17-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 BJD13_07375 0b8aaf581083cbb2c8c5026531f6f9e0 738 Gene3D G3DSA:3.90.70.10 23 167 2.7E-39 T 17-10-2018 BJD13_07375 0b8aaf581083cbb2c8c5026531f6f9e0 738 SUPERFAMILY SSF52540 498 712 2.76E-55 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_07375 0b8aaf581083cbb2c8c5026531f6f9e0 738 SUPERFAMILY SSF90123 173 485 3.01E-51 T 17-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BJD13_07375 0b8aaf581083cbb2c8c5026531f6f9e0 738 Pfam PF00005 ABC transporter 521 666 4.9E-28 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD13_07375 0b8aaf581083cbb2c8c5026531f6f9e0 738 Gene3D G3DSA:3.40.50.300 492 738 1.3E-60 T 17-10-2018 BJD13_07375 0b8aaf581083cbb2c8c5026531f6f9e0 738 Pfam PF03412 Peptidase C39 family 31 158 2.8E-34 T 17-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 BJD13_07375 0b8aaf581083cbb2c8c5026531f6f9e0 738 SMART SM00382 527 709 2.1E-14 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_07375 0b8aaf581083cbb2c8c5026531f6f9e0 738 Gene3D G3DSA:1.20.1560.10 172 486 5.8E-55 T 17-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BJD13_09900 51d4346d9322e997accacab2e472417f 534 TIGRFAM TIGR04120 DNA_lig_bact: DNA ligase, ATP-dependent, PP_1105 family 2 532 1.9E-187 T 17-10-2018 IPR026333 ATP-dependent DNA ligase, PP_1105 family BJD13_09900 51d4346d9322e997accacab2e472417f 534 SUPERFAMILY SSF50249 413 532 2.06E-26 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD13_09900 51d4346d9322e997accacab2e472417f 534 SUPERFAMILY SSF56091 206 408 7.77E-54 T 17-10-2018 BJD13_09900 51d4346d9322e997accacab2e472417f 534 Gene3D G3DSA:3.30.470.30 207 408 1.4E-47 T 17-10-2018 BJD13_09900 51d4346d9322e997accacab2e472417f 534 Pfam PF04675 DNA ligase N terminus 3 166 2.3E-18 T 17-10-2018 IPR012308 DNA ligase, ATP-dependent, N-terminal GO:0003677|GO:0003910|GO:0006281|GO:0006310 BJD13_09900 51d4346d9322e997accacab2e472417f 534 Pfam PF04679 ATP dependent DNA ligase C terminal region 429 518 3.3E-8 T 17-10-2018 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 BJD13_09900 51d4346d9322e997accacab2e472417f 534 Pfam PF01068 ATP dependent DNA ligase domain 227 408 1.3E-33 T 17-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 BJD13_09900 51d4346d9322e997accacab2e472417f 534 Gene3D G3DSA:2.40.50.140 412 534 6.7E-27 T 17-10-2018 BJD13_21445 2b8cee1c56eaeb2ac39b360c8bb0abd1 169 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 21 156 4.4E-13 T 17-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 BJD13_21445 2b8cee1c56eaeb2ac39b360c8bb0abd1 169 Pfam PF12019 Type II transport protein GspH 63 153 8.6E-6 T 17-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 BJD13_21445 2b8cee1c56eaeb2ac39b360c8bb0abd1 169 SUPERFAMILY SSF54523 26 148 3.22E-9 T 17-10-2018 BJD13_14455 ac3932b227fa4459ce9495a77eaab75a 264 Pfam PF02675 S-adenosylmethionine decarboxylase 42 170 6.3E-31 T 17-10-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 BJD13_14455 ac3932b227fa4459ce9495a77eaab75a 264 TIGRFAM TIGR03331 SAM_DCase_Eco: S-adenosylmethionine decarboxylase proenzyme 7 262 6.0E-142 T 17-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 BJD13_14455 ac3932b227fa4459ce9495a77eaab75a 264 SUPERFAMILY SSF56276 47 175 1.77E-24 T 17-10-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 BJD13_14455 ac3932b227fa4459ce9495a77eaab75a 264 Gene3D G3DSA:3.30.360.110 42 88 3.0E-5 T 17-10-2018 BJD13_14455 ac3932b227fa4459ce9495a77eaab75a 264 Hamap MF_00465 S-adenosylmethionine decarboxylase proenzyme [speD]. 1 264 154.107 T 17-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 BJD13_14455 ac3932b227fa4459ce9495a77eaab75a 264 PIRSF PIRSF001356 2 264 4.0E-147 T 17-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 BJD13_14455 ac3932b227fa4459ce9495a77eaab75a 264 Gene3D G3DSA:3.60.90.10 103 187 1.0E-6 T 17-10-2018 BJD13_02130 7283186484b31a5fb26014928427edf7 494 Pfam PF00990 Diguanylate cyclase, GGDEF domain 329 491 2.0E-47 T 17-10-2018 IPR000160 GGDEF domain BJD13_02130 7283186484b31a5fb26014928427edf7 494 Gene3D G3DSA:3.30.450.20 190 278 6.2E-20 T 17-10-2018 BJD13_02130 7283186484b31a5fb26014928427edf7 494 Pfam PF02743 Cache domain 44 272 8.8E-18 T 17-10-2018 IPR033479 Double Cache domain 1 BJD13_02130 7283186484b31a5fb26014928427edf7 494 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 326 492 5.5E-48 T 17-10-2018 IPR000160 GGDEF domain BJD13_02130 7283186484b31a5fb26014928427edf7 494 Gene3D G3DSA:3.30.70.270 315 494 1.1E-56 T 17-10-2018 BJD13_02130 7283186484b31a5fb26014928427edf7 494 SMART SM00267 318 494 3.6E-59 T 17-10-2018 IPR000160 GGDEF domain BJD13_02130 7283186484b31a5fb26014928427edf7 494 Gene3D G3DSA:3.30.450.20 36 187 1.2E-36 T 17-10-2018 BJD13_02130 7283186484b31a5fb26014928427edf7 494 SUPERFAMILY SSF55073 334 492 2.28E-46 T 17-10-2018 IPR029787 Nucleotide cyclase BJD13_22785 7f7c72aaca675505954a61f7319aa2b6 293 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 12 258 1.3E-79 T 17-10-2018 IPR017689 Outer membrane protein assembly factor BamD BJD13_22785 7f7c72aaca675505954a61f7319aa2b6 293 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 10 252 35.322 T 17-10-2018 IPR017689 Outer membrane protein assembly factor BamD BJD13_22785 7f7c72aaca675505954a61f7319aa2b6 293 SUPERFAMILY SSF48452 42 130 6.48E-11 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_22785 7f7c72aaca675505954a61f7319aa2b6 293 Gene3D G3DSA:1.25.40.10 41 261 1.4E-55 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_22785 7f7c72aaca675505954a61f7319aa2b6 293 Pfam PF13525 Outer membrane lipoprotein 40 244 1.1E-57 T 17-10-2018 IPR039565 Outer membrane lipoprotein BamD-like BJD13_18310 bf9202f19a19b5a68e68fb6d755af8aa 167 Pfam PF05638 Type VI secretion system effector, Hcp 12 139 1.4E-26 T 17-10-2018 IPR008514 Type VI secretion system effector, Hcp BJD13_18310 bf9202f19a19b5a68e68fb6d755af8aa 167 SUPERFAMILY SSF141452 2 162 2.62E-38 T 17-10-2018 IPR036624 Hcp1-like superfamily BJD13_18310 bf9202f19a19b5a68e68fb6d755af8aa 167 Gene3D G3DSA:2.30.110.20 1 165 5.9E-46 T 17-10-2018 IPR036624 Hcp1-like superfamily BJD13_10415 b6d281ba58f438b5e687a2cbb11aef45 142 Pfam PF04314 Copper chaperone PCu(A)C 23 130 9.3E-30 T 17-10-2018 IPR007410 Copper chaperone PCuAC BJD13_10415 b6d281ba58f438b5e687a2cbb11aef45 142 Gene3D G3DSA:2.60.40.1890 26 141 2.7E-32 T 17-10-2018 IPR036182 Copper chaperone PCuAC superfamily BJD13_10415 b6d281ba58f438b5e687a2cbb11aef45 142 SUPERFAMILY SSF110087 2 140 3.92E-36 T 17-10-2018 IPR036182 Copper chaperone PCuAC superfamily BJD13_09210 00095cbc5c74adca386d6a639397f832 255 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 125 135 - T 17-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 BJD13_09210 00095cbc5c74adca386d6a639397f832 255 Pfam PF01026 TatD related DNase 4 251 1.4E-66 T 17-10-2018 IPR001130 TatD family GO:0016788 BJD13_09210 00095cbc5c74adca386d6a639397f832 255 SUPERFAMILY SSF51556 1 253 1.05E-80 T 17-10-2018 IPR032466 Metal-dependent hydrolase BJD13_09210 00095cbc5c74adca386d6a639397f832 255 PIRSF PIRSF005902 1 255 5.2E-67 T 17-10-2018 IPR001130 TatD family GO:0016788 BJD13_09210 00095cbc5c74adca386d6a639397f832 255 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 17-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 BJD13_09210 00095cbc5c74adca386d6a639397f832 255 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 188 204 - T 17-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 BJD13_09210 00095cbc5c74adca386d6a639397f832 255 Gene3D G3DSA:3.20.20.140 1 254 2.1E-80 T 17-10-2018 BJD13_20345 6ce564cc9378e28bba3eb583940e93fe 245 SMART SM00892 27 230 2.2E-33 T 17-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 BJD13_20345 6ce564cc9378e28bba3eb583940e93fe 245 SMART SM00477 28 225 3.2E-8 T 17-10-2018 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 BJD13_20345 6ce564cc9378e28bba3eb583940e93fe 245 Pfam PF01223 DNA/RNA non-specific endonuclease 19 215 1.2E-35 T 17-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 BJD13_20345 6ce564cc9378e28bba3eb583940e93fe 245 SUPERFAMILY SSF54060 24 239 4.77E-40 T 17-10-2018 BJD13_20345 6ce564cc9378e28bba3eb583940e93fe 245 Gene3D G3DSA:3.40.570.10 11 234 2.7E-37 T 17-10-2018 BJD13_18770 2ffee25b98908e8f40a8bdd2d3b5f22a 520 Gene3D G3DSA:2.60.40.1500 379 513 2.0E-160 T 17-10-2018 BJD13_18770 2ffee25b98908e8f40a8bdd2d3b5f22a 520 SUPERFAMILY SSF51445 42 378 2.11E-84 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily BJD13_18770 2ffee25b98908e8f40a8bdd2d3b5f22a 520 ProSitePatterns PS01027 Glycosyl hydrolases family 39 active site. 173 182 - T 17-10-2018 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2024101|Reactome: R-HSA-2206302 BJD13_18770 2ffee25b98908e8f40a8bdd2d3b5f22a 520 PRINTS PR00745 Glycosyl hydrolase family 39 signature 232 246 7.4E-16 T 17-10-2018 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2024101|Reactome: R-HSA-2206302 BJD13_18770 2ffee25b98908e8f40a8bdd2d3b5f22a 520 PRINTS PR00745 Glycosyl hydrolase family 39 signature 170 186 7.4E-16 T 17-10-2018 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2024101|Reactome: R-HSA-2206302 BJD13_18770 2ffee25b98908e8f40a8bdd2d3b5f22a 520 PRINTS PR00745 Glycosyl hydrolase family 39 signature 153 170 7.4E-16 T 17-10-2018 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2024101|Reactome: R-HSA-2206302 BJD13_18770 2ffee25b98908e8f40a8bdd2d3b5f22a 520 PRINTS PR00745 Glycosyl hydrolase family 39 signature 107 123 7.4E-16 T 17-10-2018 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2024101|Reactome: R-HSA-2206302 BJD13_18770 2ffee25b98908e8f40a8bdd2d3b5f22a 520 Gene3D G3DSA:3.20.20.80 57 378 2.0E-160 T 17-10-2018 BJD13_18770 2ffee25b98908e8f40a8bdd2d3b5f22a 520 SUPERFAMILY SSF51011 366 518 1.91E-31 T 17-10-2018 BJD13_18770 2ffee25b98908e8f40a8bdd2d3b5f22a 520 Pfam PF01229 Glycosyl hydrolases family 39 32 515 7.6E-93 T 17-10-2018 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2024101|Reactome: R-HSA-2206302 BJD13_00345 65c813090e28f16be059b7ec4aa3b890 200 Pfam PF07179 SseB protein N-terminal domain 20 126 5.3E-12 T 17-10-2018 IPR009839 SseB protein N-terminal domain BJD13_10245 86727c5e42ee4ddae9ab4a2b6c0e3b96 376 Gene3D G3DSA:1.10.287.130 149 226 7.0E-14 T 17-10-2018 BJD13_10245 86727c5e42ee4ddae9ab4a2b6c0e3b96 376 Gene3D G3DSA:3.40.50.2300 8 148 3.4E-34 T 17-10-2018 BJD13_10245 86727c5e42ee4ddae9ab4a2b6c0e3b96 376 SMART SM00448 18 132 1.5E-32 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_10245 86727c5e42ee4ddae9ab4a2b6c0e3b96 376 Gene3D G3DSA:3.30.565.10 229 370 8.8E-25 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_10245 86727c5e42ee4ddae9ab4a2b6c0e3b96 376 Pfam PF00512 His Kinase A (phospho-acceptor) domain 161 222 3.4E-12 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_10245 86727c5e42ee4ddae9ab4a2b6c0e3b96 376 SUPERFAMILY SSF55874 213 361 2.23E-24 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_10245 86727c5e42ee4ddae9ab4a2b6c0e3b96 376 Pfam PF00072 Response regulator receiver domain 20 132 5.8E-24 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_10245 86727c5e42ee4ddae9ab4a2b6c0e3b96 376 SMART SM00388 158 224 2.0E-12 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_10245 86727c5e42ee4ddae9ab4a2b6c0e3b96 376 SUPERFAMILY SSF52172 17 156 1.15E-35 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_10245 86727c5e42ee4ddae9ab4a2b6c0e3b96 376 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 267 361 6.2E-14 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_10245 86727c5e42ee4ddae9ab4a2b6c0e3b96 376 SMART SM00387 267 373 1.1E-18 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_10245 86727c5e42ee4ddae9ab4a2b6c0e3b96 376 SUPERFAMILY SSF47384 145 224 3.34E-15 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD13_12110 8c38c0eed37e610be4be6f3f80db5663 425 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 22 281 1.2E-72 T 17-10-2018 IPR017039 Virulence factor BrkB BJD13_12110 8c38c0eed37e610be4be6f3f80db5663 425 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 14 309 21.368 T 17-10-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial BJD13_12110 8c38c0eed37e610be4be6f3f80db5663 425 Pfam PF03631 Virulence factor BrkB 33 279 9.7E-57 T 17-10-2018 IPR017039 Virulence factor BrkB BJD13_05700 026bec5cd0899527b5d9f50d1066f8db 112 SUPERFAMILY SSF47598 5 52 4.45E-7 T 17-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 BJD13_05700 026bec5cd0899527b5d9f50d1066f8db 112 Pfam PF05534 HicB family 7 36 2.3E-4 T 17-10-2018 IPR008651 Uncharacterised protein family HicB BJD13_05700 026bec5cd0899527b5d9f50d1066f8db 112 Pfam PF02810 SEC-C motif 92 108 4.9E-7 T 17-10-2018 IPR004027 SEC-C motif BJD13_05700 026bec5cd0899527b5d9f50d1066f8db 112 SUPERFAMILY SSF103642 90 110 4.09E-7 T 17-10-2018 BJD13_05700 026bec5cd0899527b5d9f50d1066f8db 112 Gene3D G3DSA:3.10.450.50 73 112 4.1E-7 T 17-10-2018 BJD13_05685 026bec5cd0899527b5d9f50d1066f8db 112 SUPERFAMILY SSF47598 5 52 4.45E-7 T 17-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 BJD13_05685 026bec5cd0899527b5d9f50d1066f8db 112 Pfam PF05534 HicB family 7 36 2.3E-4 T 17-10-2018 IPR008651 Uncharacterised protein family HicB BJD13_05685 026bec5cd0899527b5d9f50d1066f8db 112 Pfam PF02810 SEC-C motif 92 108 4.9E-7 T 17-10-2018 IPR004027 SEC-C motif BJD13_05685 026bec5cd0899527b5d9f50d1066f8db 112 SUPERFAMILY SSF103642 90 110 4.09E-7 T 17-10-2018 BJD13_05685 026bec5cd0899527b5d9f50d1066f8db 112 Gene3D G3DSA:3.10.450.50 73 112 4.1E-7 T 17-10-2018 BJD13_05715 026bec5cd0899527b5d9f50d1066f8db 112 SUPERFAMILY SSF47598 5 52 4.45E-7 T 17-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 BJD13_05715 026bec5cd0899527b5d9f50d1066f8db 112 Pfam PF05534 HicB family 7 36 2.3E-4 T 17-10-2018 IPR008651 Uncharacterised protein family HicB BJD13_05715 026bec5cd0899527b5d9f50d1066f8db 112 Pfam PF02810 SEC-C motif 92 108 4.9E-7 T 17-10-2018 IPR004027 SEC-C motif BJD13_05715 026bec5cd0899527b5d9f50d1066f8db 112 SUPERFAMILY SSF103642 90 110 4.09E-7 T 17-10-2018 BJD13_05715 026bec5cd0899527b5d9f50d1066f8db 112 Gene3D G3DSA:3.10.450.50 73 112 4.1E-7 T 17-10-2018 BJD13_07100 ab33b287f3735e06280c98c45f54892c 256 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 199 0.0015 T 17-10-2018 BJD13_07100 ab33b287f3735e06280c98c45f54892c 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 9.6E-11 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_07100 ab33b287f3735e06280c98c45f54892c 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 150 9.6E-11 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_07100 ab33b287f3735e06280c98c45f54892c 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 9.6E-11 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_07100 ab33b287f3735e06280c98c45f54892c 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 17-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BJD13_07100 ab33b287f3735e06280c98c45f54892c 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 1.4E-31 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_07100 ab33b287f3735e06280c98c45f54892c 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 1.4E-31 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_07100 ab33b287f3735e06280c98c45f54892c 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.4E-31 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_07100 ab33b287f3735e06280c98c45f54892c 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 1.4E-31 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_07100 ab33b287f3735e06280c98c45f54892c 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.4E-31 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_07100 ab33b287f3735e06280c98c45f54892c 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 1.4E-31 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_07100 ab33b287f3735e06280c98c45f54892c 256 Pfam PF00106 short chain dehydrogenase 8 202 1.5E-47 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_07100 ab33b287f3735e06280c98c45f54892c 256 Gene3D G3DSA:3.40.50.720 4 255 4.3E-75 T 17-10-2018 BJD13_07100 ab33b287f3735e06280c98c45f54892c 256 SUPERFAMILY SSF51735 7 252 9.35E-65 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_03300 364a3464e21f4760a4b79448ea2acfed 189 SUPERFAMILY SSF54523 17 118 3.45E-20 T 17-10-2018 BJD13_03300 364a3464e21f4760a4b79448ea2acfed 189 Pfam PF07963 Prokaryotic N-terminal methylation motif 12 36 6.8E-8 T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD13_03300 364a3464e21f4760a4b79448ea2acfed 189 Gene3D G3DSA:3.30.700.10 17 168 6.5E-17 T 17-10-2018 BJD13_03300 364a3464e21f4760a4b79448ea2acfed 189 Pfam PF12019 Type II transport protein GspH 53 171 9.3E-17 T 17-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 BJD13_03300 364a3464e21f4760a4b79448ea2acfed 189 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 15 37 6.4E-6 T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD13_14305 95f83e85280df9cbbfd1268abca8ac37 586 Pfam PF12146 Serine aminopeptidase, S33 34 267 2.0E-67 T 17-10-2018 IPR022742 Serine aminopeptidase, S33 BJD13_14305 95f83e85280df9cbbfd1268abca8ac37 586 Gene3D G3DSA:3.40.50.1820 3 287 2.9E-47 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_14305 95f83e85280df9cbbfd1268abca8ac37 586 Gene3D G3DSA:3.40.50.150 383 582 2.1E-15 T 17-10-2018 BJD13_14305 95f83e85280df9cbbfd1268abca8ac37 586 SUPERFAMILY SSF53474 6 281 2.01E-31 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_14305 95f83e85280df9cbbfd1268abca8ac37 586 SUPERFAMILY SSF53335 347 568 2.92E-19 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_14305 95f83e85280df9cbbfd1268abca8ac37 586 Pfam PF12147 Putative methyltransferase 275 583 2.0E-155 T 17-10-2018 IPR022744 Methyltransferase domain, putative BJD13_02115 e5cb6ed5879d69467099e99293aca6db 266 SUPERFAMILY SSF53474 35 263 6.73E-37 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_02115 e5cb6ed5879d69467099e99293aca6db 266 Gene3D G3DSA:3.40.50.1820 21 265 2.6E-50 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_02115 e5cb6ed5879d69467099e99293aca6db 266 Pfam PF01738 Dienelactone hydrolase family 52 262 3.5E-35 T 17-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 BJD13_03195 ed2ba2829b8bd1348a9b01a88ae1dd00 486 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 12 475 17.899 T 17-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 BJD13_03195 ed2ba2829b8bd1348a9b01a88ae1dd00 486 Pfam PF00361 Proton-conducting membrane transporter 130 423 7.0E-75 T 17-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_03195 ed2ba2829b8bd1348a9b01a88ae1dd00 486 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 312 324 2.5E-7 T 17-10-2018 BJD13_03195 ed2ba2829b8bd1348a9b01a88ae1dd00 486 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 417 436 2.5E-7 T 17-10-2018 BJD13_03195 ed2ba2829b8bd1348a9b01a88ae1dd00 486 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 78 103 2.5E-7 T 17-10-2018 BJD13_03195 ed2ba2829b8bd1348a9b01a88ae1dd00 486 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 220 241 2.5E-7 T 17-10-2018 BJD13_03195 ed2ba2829b8bd1348a9b01a88ae1dd00 486 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 15 472 9.2E-139 T 17-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 BJD13_04035 25c4c4792459b5c34c4a797c0ebf315b 1669 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 99 1662 0.0 T 17-10-2018 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 BJD13_04035 25c4c4792459b5c34c4a797c0ebf315b 1669 SUPERFAMILY SSF51735 1007 1275 7.22E-32 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_04035 25c4c4792459b5c34c4a797c0ebf315b 1669 SUPERFAMILY SSF53223 817 1003 1.53E-20 T 17-10-2018 BJD13_04035 25c4c4792459b5c34c4a797c0ebf315b 1669 PIRSF PIRSF036761 1 1669 0.0 T 17-10-2018 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 BJD13_04035 25c4c4792459b5c34c4a797c0ebf315b 1669 Pfam PF12466 Glutamate dehydrogenase N terminal 1 95 1.3E-43 T 17-10-2018 IPR024727 Bacterial NAD-glutamate dehydrogenase, N-terminal BJD13_07215 0d4c3bf350b69d7358223f09e33a2b39 108 TIGRFAM TIGR02531 yecD_yerC: TrpR homolog YerC/YecD 17 98 9.2E-15 T 17-10-2018 IPR013368 TrpR homologue YerC/YecD BJD13_07215 0d4c3bf350b69d7358223f09e33a2b39 108 SUPERFAMILY SSF48295 17 100 1.67E-23 T 17-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 BJD13_07215 0d4c3bf350b69d7358223f09e33a2b39 108 Gene3D G3DSA:1.10.1270.10 8 107 2.5E-28 T 17-10-2018 IPR038116 TrpR-like superfamily BJD13_07215 0d4c3bf350b69d7358223f09e33a2b39 108 PIRSF PIRSF012508 5 106 7.2E-28 T 17-10-2018 IPR013368 TrpR homologue YerC/YecD BJD13_07215 0d4c3bf350b69d7358223f09e33a2b39 108 Pfam PF01371 Trp repressor protein 16 100 2.7E-28 T 17-10-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 BJD13_05840 38d82d9508586a87222988212d250f3a 327 SUPERFAMILY SSF46785 3 81 1.97E-12 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_05840 38d82d9508586a87222988212d250f3a 327 SUPERFAMILY SSF53850 91 297 4.71E-33 T 17-10-2018 BJD13_05840 38d82d9508586a87222988212d250f3a 327 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 1.1E-13 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_05840 38d82d9508586a87222988212d250f3a 327 Gene3D G3DSA:1.10.10.10 1 87 8.1E-25 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_05840 38d82d9508586a87222988212d250f3a 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 7.3E-5 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_05840 38d82d9508586a87222988212d250f3a 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 7.3E-5 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_05840 38d82d9508586a87222988212d250f3a 327 Gene3D G3DSA:3.40.190.10 173 270 2.1E-53 T 17-10-2018 BJD13_05840 38d82d9508586a87222988212d250f3a 327 Pfam PF03466 LysR substrate binding domain 100 297 1.1E-20 T 17-10-2018 IPR005119 LysR, substrate-binding BJD13_05840 38d82d9508586a87222988212d250f3a 327 Gene3D G3DSA:3.40.190.10 91 294 2.1E-53 T 17-10-2018 BJD13_03360 6b739fcc474883e6925aa2efeab86249 557 Gene3D G3DSA:3.40.50.300 305 542 1.0E-39 T 17-10-2018 BJD13_03360 6b739fcc474883e6925aa2efeab86249 557 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 122 550 2.7E-111 T 17-10-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 BJD13_03360 6b739fcc474883e6925aa2efeab86249 557 SUPERFAMILY SSF52540 82 543 2.12E-58 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_04735 8572538f704734e79bc519df58db5ad0 561 SUPERFAMILY SSF52540 335 553 1.9E-55 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_04735 8572538f704734e79bc519df58db5ad0 561 Pfam PF00005 ABC transporter 359 506 9.4E-31 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD13_04735 8572538f704734e79bc519df58db5ad0 561 Gene3D G3DSA:3.40.50.300 334 559 9.7E-61 T 17-10-2018 BJD13_04735 8572538f704734e79bc519df58db5ad0 561 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 8 536 5.7E-121 T 17-10-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0016021|GO:0034775|GO:0042626|GO:0045454 BJD13_04735 8572538f704734e79bc519df58db5ad0 561 SUPERFAMILY SSF90123 7 329 1.18E-31 T 17-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BJD13_04735 8572538f704734e79bc519df58db5ad0 561 Pfam PF00664 ABC transporter transmembrane region 65 265 8.7E-7 T 17-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 BJD13_04735 8572538f704734e79bc519df58db5ad0 561 ProSitePatterns PS00211 ABC transporters family signature. 479 493 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD13_04735 8572538f704734e79bc519df58db5ad0 561 SMART SM00382 368 560 2.2E-13 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_04735 8572538f704734e79bc519df58db5ad0 561 Gene3D G3DSA:1.20.1560.10 3 330 1.9E-19 T 17-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BJD13_17275 9325fed524443c1837a88fe32067f9fd 247 Gene3D G3DSA:3.40.50.720 1 246 6.0E-79 T 17-10-2018 BJD13_17275 9325fed524443c1837a88fe32067f9fd 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.7E-38 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_17275 9325fed524443c1837a88fe32067f9fd 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 2.7E-38 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_17275 9325fed524443c1837a88fe32067f9fd 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.7E-38 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_17275 9325fed524443c1837a88fe32067f9fd 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 2.7E-38 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_17275 9325fed524443c1837a88fe32067f9fd 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 2.7E-38 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_17275 9325fed524443c1837a88fe32067f9fd 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 2.7E-38 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_17275 9325fed524443c1837a88fe32067f9fd 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 5.3E-6 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_17275 9325fed524443c1837a88fe32067f9fd 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 5.3E-6 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_17275 9325fed524443c1837a88fe32067f9fd 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 5.3E-6 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_17275 9325fed524443c1837a88fe32067f9fd 247 SUPERFAMILY SSF51735 6 246 3.51E-75 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_17275 9325fed524443c1837a88fe32067f9fd 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 244 5.2E-60 T 17-10-2018 BJD13_17275 9325fed524443c1837a88fe32067f9fd 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 182 4.1E-4 T 17-10-2018 BJD13_03575 60645623266e3a0d6b40c327d737ef87 362 Pfam PF01757 Acyltransferase family 30 344 6.2E-26 T 17-10-2018 IPR002656 Acyltransferase 3 GO:0016747 BJD13_08275 a0375c4efec5520f64595d8ee6067329 951 Gene3D G3DSA:3.30.450.20 162 295 6.2E-33 T 17-10-2018 BJD13_08275 a0375c4efec5520f64595d8ee6067329 951 Gene3D G3DSA:3.30.450.20 37 161 1.1E-20 T 17-10-2018 BJD13_08275 a0375c4efec5520f64595d8ee6067329 951 SUPERFAMILY SSF47384 563 640 3.14E-11 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD13_08275 a0375c4efec5520f64595d8ee6067329 951 Pfam PF08448 PAS fold 171 284 1.4E-7 T 17-10-2018 IPR013656 PAS fold-4 BJD13_08275 a0375c4efec5520f64595d8ee6067329 951 Pfam PF08448 PAS fold 61 154 5.2E-7 T 17-10-2018 IPR013656 PAS fold-4 BJD13_08275 a0375c4efec5520f64595d8ee6067329 951 SMART SM00448 829 942 4.9E-21 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_08275 a0375c4efec5520f64595d8ee6067329 951 PRINTS PR00344 Bacterial sensor protein C-terminal signature 735 749 2.4E-15 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_08275 a0375c4efec5520f64595d8ee6067329 951 PRINTS PR00344 Bacterial sensor protein C-terminal signature 766 784 2.4E-15 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_08275 a0375c4efec5520f64595d8ee6067329 951 PRINTS PR00344 Bacterial sensor protein C-terminal signature 790 803 2.4E-15 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_08275 a0375c4efec5520f64595d8ee6067329 951 PRINTS PR00344 Bacterial sensor protein C-terminal signature 753 763 2.4E-15 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_08275 a0375c4efec5520f64595d8ee6067329 951 Pfam PF08447 PAS fold 465 528 1.7E-10 T 17-10-2018 IPR013655 PAS fold-3 GO:0005515 BJD13_08275 a0375c4efec5520f64595d8ee6067329 951 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 685 803 1.8E-17 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_08275 a0375c4efec5520f64595d8ee6067329 951 Gene3D G3DSA:3.40.50.2300 826 951 5.9E-25 T 17-10-2018 BJD13_08275 a0375c4efec5520f64595d8ee6067329 951 Pfam PF00989 PAS fold 299 409 1.8E-13 T 17-10-2018 IPR013767 PAS fold GO:0006355 BJD13_08275 a0375c4efec5520f64595d8ee6067329 951 SMART SM00387 684 806 4.1E-25 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_08275 a0375c4efec5520f64595d8ee6067329 951 SUPERFAMILY SSF52172 828 949 2.7E-24 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_08275 a0375c4efec5520f64595d8ee6067329 951 SUPERFAMILY SSF55785 150 282 8.55E-12 T 17-10-2018 IPR035965 PAS domain superfamily BJD13_08275 a0375c4efec5520f64595d8ee6067329 951 Gene3D G3DSA:3.30.450.20 425 533 2.0E-18 T 17-10-2018 BJD13_08275 a0375c4efec5520f64595d8ee6067329 951 SMART SM00086 370 412 3.4 T 17-10-2018 IPR001610 PAC motif BJD13_08275 a0375c4efec5520f64595d8ee6067329 951 SMART SM00086 493 535 5.2E-6 T 17-10-2018 IPR001610 PAC motif BJD13_08275 a0375c4efec5520f64595d8ee6067329 951 SMART SM00086 241 284 89.0 T 17-10-2018 IPR001610 PAC motif BJD13_08275 a0375c4efec5520f64595d8ee6067329 951 Pfam PF00512 His Kinase A (phospho-acceptor) domain 576 641 1.3E-10 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_08275 a0375c4efec5520f64595d8ee6067329 951 Gene3D G3DSA:1.10.287.130 567 642 1.7E-19 T 17-10-2018 BJD13_08275 a0375c4efec5520f64595d8ee6067329 951 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 292 419 3.3E-17 T 17-10-2018 IPR000014 PAS domain BJD13_08275 a0375c4efec5520f64595d8ee6067329 951 SMART SM00388 575 643 6.3E-8 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_08275 a0375c4efec5520f64595d8ee6067329 951 Pfam PF00072 Response regulator receiver domain 831 942 1.8E-15 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_08275 a0375c4efec5520f64595d8ee6067329 951 SUPERFAMILY SSF55874 634 804 6.81E-37 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_08275 a0375c4efec5520f64595d8ee6067329 951 Gene3D G3DSA:3.30.450.20 296 424 6.7E-25 T 17-10-2018 BJD13_08275 a0375c4efec5520f64595d8ee6067329 951 SMART SM00091 37 102 40.0 T 17-10-2018 IPR000014 PAS domain BJD13_08275 a0375c4efec5520f64595d8ee6067329 951 SMART SM00091 424 487 78.0 T 17-10-2018 IPR000014 PAS domain BJD13_08275 a0375c4efec5520f64595d8ee6067329 951 SMART SM00091 165 230 0.0039 T 17-10-2018 IPR000014 PAS domain BJD13_08275 a0375c4efec5520f64595d8ee6067329 951 SMART SM00091 296 363 6.5E-9 T 17-10-2018 IPR000014 PAS domain BJD13_08275 a0375c4efec5520f64595d8ee6067329 951 SUPERFAMILY SSF55785 412 533 6.81E-13 T 17-10-2018 IPR035965 PAS domain superfamily BJD13_08275 a0375c4efec5520f64595d8ee6067329 951 Gene3D G3DSA:3.30.565.10 646 807 6.3E-41 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_08275 a0375c4efec5520f64595d8ee6067329 951 SUPERFAMILY SSF55785 50 160 1.73E-8 T 17-10-2018 IPR035965 PAS domain superfamily BJD13_08275 a0375c4efec5520f64595d8ee6067329 951 SUPERFAMILY SSF55785 280 407 3.06E-23 T 17-10-2018 IPR035965 PAS domain superfamily BJD13_01940 f134b55bb65086e6421ed1e723cbb18b 109 SUPERFAMILY SSF50022 4 106 2.36E-25 T 17-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 BJD13_01940 f134b55bb65086e6421ed1e723cbb18b 109 Gene3D G3DSA:2.102.10.10 1 109 5.9E-28 T 17-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 BJD13_01940 f134b55bb65086e6421ed1e723cbb18b 109 Pfam PF00355 Rieske [2Fe-2S] domain 4 95 1.9E-15 T 17-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 BJD13_11810 c759d599f352a8a0b95cc293eab5dabd 130 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 11 127 3.0E-54 T 17-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_11810 c759d599f352a8a0b95cc293eab5dabd 130 SUPERFAMILY SSF53137 17 130 6.02E-46 T 17-10-2018 BJD13_11810 c759d599f352a8a0b95cc293eab5dabd 130 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 130 32.563 T 17-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 BJD13_11810 c759d599f352a8a0b95cc293eab5dabd 130 Gene3D G3DSA:3.30.420.80 2 130 7.8E-54 T 17-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 BJD13_11810 c759d599f352a8a0b95cc293eab5dabd 130 ProSitePatterns PS00054 Ribosomal protein S11 signature. 98 120 - T 17-10-2018 IPR018102 Ribosomal S11, conserved site BJD13_11810 c759d599f352a8a0b95cc293eab5dabd 130 Pfam PF00411 Ribosomal protein S11 20 129 5.3E-50 T 17-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 BJD13_11810 c759d599f352a8a0b95cc293eab5dabd 130 PIRSF PIRSF002131 1 130 2.0E-52 T 17-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 BJD13_00215 03541268da203e2bf39339fe85ccb110 177 Pfam PF03713 Domain of unknown function (DUF305) 119 172 1.2E-13 T 17-10-2018 IPR005183 Domain of unknown function DUF305 BJD13_00215 03541268da203e2bf39339fe85ccb110 177 Gene3D G3DSA:1.20.1260.10 113 176 1.7E-14 T 17-10-2018 IPR012347 Ferritin-like BJD13_08845 cca7ec30aa0f88ab2a95e87147d5cb7d 436 Gene3D G3DSA:1.20.1250.20 238 428 8.8E-60 T 17-10-2018 BJD13_08845 cca7ec30aa0f88ab2a95e87147d5cb7d 436 TIGRFAM TIGR00885 fucP: L-fucose:H+ symporter permease 25 421 2.9E-91 T 17-10-2018 IPR005275 L-fucose permease FucP GO:0015150|GO:0015756 BJD13_08845 cca7ec30aa0f88ab2a95e87147d5cb7d 436 Gene3D G3DSA:1.20.1250.20 19 237 4.5E-60 T 17-10-2018 BJD13_08845 cca7ec30aa0f88ab2a95e87147d5cb7d 436 TIGRFAM TIGR01272 gluP: glucose/galactose transporter WARNING 104 420 9.9E-94 T 17-10-2018 IPR005964 Bacterial glucose/galactose transporter GO:0005354|GO:0005355|GO:0015757|GO:0016021|GO:1904659 BJD13_08845 cca7ec30aa0f88ab2a95e87147d5cb7d 436 Pfam PF07690 Major Facilitator Superfamily 31 382 6.0E-23 T 17-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD13_08845 cca7ec30aa0f88ab2a95e87147d5cb7d 436 SUPERFAMILY SSF103473 23 424 9.55E-40 T 17-10-2018 IPR036259 MFS transporter superfamily BJD13_05485 d1fe2eaf5f0762157c895d608c90c351 430 SUPERFAMILY SSF51735 13 197 1.12E-42 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_05485 d1fe2eaf5f0762157c895d608c90c351 430 Gene3D G3DSA:3.40.50.720 6 203 4.8E-58 T 17-10-2018 BJD13_05485 d1fe2eaf5f0762157c895d608c90c351 430 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 323 421 9.5E-20 T 17-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BJD13_05485 d1fe2eaf5f0762157c895d608c90c351 430 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 13 186 6.8E-31 T 17-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BJD13_05485 d1fe2eaf5f0762157c895d608c90c351 430 PIRSF PIRSF000124 12 429 1.9E-50 T 17-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 BJD13_05485 d1fe2eaf5f0762157c895d608c90c351 430 PIRSF PIRSF500136 5 430 2.6E-146 T 17-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 BJD13_05485 d1fe2eaf5f0762157c895d608c90c351 430 Gene3D G3DSA:3.40.50.720 207 429 2.0E-55 T 17-10-2018 BJD13_05485 d1fe2eaf5f0762157c895d608c90c351 430 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 208 296 1.8E-24 T 17-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BJD13_05485 d1fe2eaf5f0762157c895d608c90c351 430 SMART SM00984 323 423 4.5E-34 T 17-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BJD13_05485 d1fe2eaf5f0762157c895d608c90c351 430 SUPERFAMILY SSF48179 207 297 1.36E-25 T 17-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BJD13_05485 d1fe2eaf5f0762157c895d608c90c351 430 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 13 418 5.0E-113 T 17-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 BJD13_05485 d1fe2eaf5f0762157c895d608c90c351 430 SUPERFAMILY SSF52413 314 426 1.44E-25 T 17-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 BJD13_02950 a6dbce262b6f9c039bef3dfe3425fdbe 144 Gene3D G3DSA:3.30.428.10 12 144 7.0E-34 T 17-10-2018 IPR036265 HIT-like superfamily BJD13_02950 a6dbce262b6f9c039bef3dfe3425fdbe 144 Pfam PF01230 HIT domain 21 108 8.6E-8 T 17-10-2018 IPR001310 Histidine triad (HIT) protein BJD13_02950 a6dbce262b6f9c039bef3dfe3425fdbe 144 SUPERFAMILY SSF54197 15 143 7.02E-29 T 17-10-2018 IPR036265 HIT-like superfamily BJD13_02950 a6dbce262b6f9c039bef3dfe3425fdbe 144 PIRSF PIRSF000714 12 144 2.5E-48 T 17-10-2018 IPR026026 Histidine triad hydrolase, Hint-type BJD13_18725 05a6031a0ccf1bcbeeeab3042e50557c 150 Pfam PF12158 Protein of unknown function (DUF3592) 5 140 9.8E-6 T 17-10-2018 IPR021994 Protein of unknown function DUF3592 BJD13_04615 1afc3e679421a5803c73d46654e64577 346 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 304 336 1.2E-7 T 17-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 BJD13_04615 1afc3e679421a5803c73d46654e64577 346 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 223 345 28.523 T 17-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 BJD13_04615 1afc3e679421a5803c73d46654e64577 346 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 227 336 1.4E-42 T 17-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 BJD13_04615 1afc3e679421a5803c73d46654e64577 346 SUPERFAMILY SSF57716 306 344 3.85E-6 T 17-10-2018 BJD13_04615 1afc3e679421a5803c73d46654e64577 346 SUPERFAMILY SSF109635 213 305 3.79E-29 T 17-10-2018 IPR037187 DksA, N-terminal domain superfamily BJD13_04615 1afc3e679421a5803c73d46654e64577 346 Gene3D G3DSA:1.20.120.910 216 345 1.6E-31 T 17-10-2018 BJD13_18140 e7c10d472075d8fe06c12771a5ba36e5 575 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 67 492 1.3E-57 T 17-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 BJD13_18140 e7c10d472075d8fe06c12771a5ba36e5 575 Gene3D G3DSA:1.20.1730.10 55 570 2.1E-58 T 17-10-2018 IPR038377 Sodium/glucose symporter superfamily BJD13_18140 e7c10d472075d8fe06c12771a5ba36e5 575 Pfam PF00474 Sodium:solute symporter family 67 492 1.5E-106 T 17-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 BJD13_18140 e7c10d472075d8fe06c12771a5ba36e5 575 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 182 207 - T 17-10-2018 IPR018212 Sodium/solute symporter, conserved site BJD13_09455 a78ad5aa81a6fa3c0841938065a763eb 265 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 17-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 BJD13_09455 a78ad5aa81a6fa3c0841938065a763eb 265 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 40.936 T 17-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_09455 a78ad5aa81a6fa3c0841938065a763eb 265 Gene3D G3DSA:3.40.50.10490 8 219 1.2E-88 T 17-10-2018 BJD13_09455 a78ad5aa81a6fa3c0841938065a763eb 265 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 4 226 1.8E-100 T 17-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_09455 a78ad5aa81a6fa3c0841938065a763eb 265 SUPERFAMILY SSF52313 6 229 5.62E-91 T 17-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily BJD13_09455 a78ad5aa81a6fa3c0841938065a763eb 265 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 17-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 BJD13_09455 a78ad5aa81a6fa3c0841938065a763eb 265 Pfam PF00318 Ribosomal protein S2 9 224 1.6E-92 T 17-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_09455 a78ad5aa81a6fa3c0841938065a763eb 265 PRINTS PR00395 Ribosomal protein S2 signature 175 186 1.5E-36 T 17-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_09455 a78ad5aa81a6fa3c0841938065a763eb 265 PRINTS PR00395 Ribosomal protein S2 signature 6 24 1.5E-36 T 17-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_09455 a78ad5aa81a6fa3c0841938065a763eb 265 PRINTS PR00395 Ribosomal protein S2 signature 158 175 1.5E-36 T 17-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_09455 a78ad5aa81a6fa3c0841938065a763eb 265 PRINTS PR00395 Ribosomal protein S2 signature 37 46 1.5E-36 T 17-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_09455 a78ad5aa81a6fa3c0841938065a763eb 265 PRINTS PR00395 Ribosomal protein S2 signature 87 104 1.5E-36 T 17-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_09455 a78ad5aa81a6fa3c0841938065a763eb 265 PRINTS PR00395 Ribosomal protein S2 signature 196 210 1.5E-36 T 17-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_09455 a78ad5aa81a6fa3c0841938065a763eb 265 Gene3D G3DSA:1.10.287.610 103 150 1.2E-88 T 17-10-2018 BJD13_11960 f19b35745d20cc104e40dbbdc50c4245 1404 SUPERFAMILY SSF64484 16 1363 0.0 T 17-10-2018 BJD13_11960 f19b35745d20cc104e40dbbdc50c4245 1404 Gene3D G3DSA:1.10.274.100 490 640 5.5E-41 T 17-10-2018 BJD13_11960 f19b35745d20cc104e40dbbdc50c4245 1404 Gene3D G3DSA:1.10.132.30 641 790 1.8E-63 T 17-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD13_11960 f19b35745d20cc104e40dbbdc50c4245 1404 Pfam PF00623 RNA polymerase Rpb1, domain 2 389 485 1.5E-27 T 17-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD13_11960 f19b35745d20cc104e40dbbdc50c4245 1404 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 395 3.8E-8 T 17-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD13_11960 f19b35745d20cc104e40dbbdc50c4245 1404 Gene3D G3DSA:2.40.50.100 949 1023 2.2E-26 T 17-10-2018 BJD13_11960 f19b35745d20cc104e40dbbdc50c4245 1404 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1315 7.1E-78 T 17-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD13_11960 f19b35745d20cc104e40dbbdc50c4245 1404 Gene3D G3DSA:1.10.150.390 1316 1373 2.2E-27 T 17-10-2018 BJD13_11960 f19b35745d20cc104e40dbbdc50c4245 1404 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 6.8E-19 T 17-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD13_11960 f19b35745d20cc104e40dbbdc50c4245 1404 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 10 1377 18.945 T 17-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD13_11960 f19b35745d20cc104e40dbbdc50c4245 1404 Gene3D G3DSA:1.10.1790.20 1136 1314 1.5E-62 T 17-10-2018 BJD13_11960 f19b35745d20cc104e40dbbdc50c4245 1404 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 1.0E-27 T 17-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD13_11960 f19b35745d20cc104e40dbbdc50c4245 1404 Gene3D G3DSA:2.40.50.100 1024 1127 1.2E-27 T 17-10-2018 BJD13_11960 f19b35745d20cc104e40dbbdc50c4245 1404 Pfam PF04997 RNA polymerase Rpb1, domain 1 17 342 1.6E-86 T 17-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD13_11960 f19b35745d20cc104e40dbbdc50c4245 1404 Gene3D G3DSA:2.40.50.100 1152 1215 1.5E-62 T 17-10-2018 BJD13_11960 f19b35745d20cc104e40dbbdc50c4245 1404 Gene3D G3DSA:1.10.40.90 374 416 6.1E-22 T 17-10-2018 BJD13_11960 f19b35745d20cc104e40dbbdc50c4245 1404 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1366 0.0 T 17-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD13_11960 f19b35745d20cc104e40dbbdc50c4245 1404 SMART SM00663 235 514 1.1E-183 T 17-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD13_06125 94304348c4ada83851c1ff1e30032d2d 477 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 307 334 2.0E-23 T 17-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 BJD13_06125 94304348c4ada83851c1ff1e30032d2d 477 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 142 158 2.0E-23 T 17-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 BJD13_06125 94304348c4ada83851c1ff1e30032d2d 477 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 113 125 2.0E-23 T 17-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 BJD13_06125 94304348c4ada83851c1ff1e30032d2d 477 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 16 32 2.0E-23 T 17-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 BJD13_06125 94304348c4ada83851c1ff1e30032d2d 477 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 64 82 2.0E-23 T 17-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 BJD13_06125 94304348c4ada83851c1ff1e30032d2d 477 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 88 103 2.0E-23 T 17-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 BJD13_06125 94304348c4ada83851c1ff1e30032d2d 477 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 196 211 2.0E-23 T 17-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 BJD13_06125 94304348c4ada83851c1ff1e30032d2d 477 SUPERFAMILY SSF51905 18 216 4.21E-47 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_06125 94304348c4ada83851c1ff1e30032d2d 477 SUPERFAMILY SSF51905 183 382 2.2E-6 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_06125 94304348c4ada83851c1ff1e30032d2d 477 Pfam PF00743 Flavin-binding monooxygenase-like 17 395 5.4E-53 T 17-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 BJD13_06125 94304348c4ada83851c1ff1e30032d2d 477 Gene3D G3DSA:3.50.50.60 14 393 1.6E-76 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_06125 94304348c4ada83851c1ff1e30032d2d 477 PIRSF PIRSF000332 14 439 8.6E-59 T 17-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 BJD13_06515 375e07b82c8890016d500d466dff4490 73 SUPERFAMILY SSF47336 8 72 3.6E-8 T 17-10-2018 IPR036736 ACP-like superfamily BJD13_06515 375e07b82c8890016d500d466dff4490 73 Gene3D G3DSA:1.10.1200.10 4 73 5.4E-10 T 17-10-2018 IPR036736 ACP-like superfamily BJD13_06340 08dc561a31247828bdf084ad6249788f 204 Pfam PF04356 Protein of unknown function (DUF489) 8 196 7.2E-61 T 17-10-2018 IPR007451 High frequency lysogenization protein HflD BJD13_06340 08dc561a31247828bdf084ad6249788f 204 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 204 30.671 T 17-10-2018 IPR007451 High frequency lysogenization protein HflD BJD13_06340 08dc561a31247828bdf084ad6249788f 204 SUPERFAMILY SSF101322 3 203 6.54E-62 T 17-10-2018 IPR035932 HflD-like superfamily BJD13_06340 08dc561a31247828bdf084ad6249788f 204 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 25 195 2.0E-86 T 17-10-2018 BJD13_06340 08dc561a31247828bdf084ad6249788f 204 Gene3D G3DSA:1.10.3890.10 2 204 1.8E-60 T 17-10-2018 IPR035932 HflD-like superfamily BJD13_08170 3166a87ca104b5c47fed3d6f0ff549c8 223 Gene3D G3DSA:2.160.10.10 96 220 4.0E-27 T 17-10-2018 BJD13_08170 3166a87ca104b5c47fed3d6f0ff549c8 223 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 153 181 - T 17-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 BJD13_08170 3166a87ca104b5c47fed3d6f0ff549c8 223 TIGRFAM TIGR03570 NeuD_NnaD: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 6 211 4.0E-62 T 17-10-2018 IPR020019 Sialic acid O-acyltransferase NeuD-like BJD13_08170 3166a87ca104b5c47fed3d6f0ff549c8 223 Gene3D G3DSA:3.40.50.20 1 95 3.9E-7 T 17-10-2018 BJD13_08170 3166a87ca104b5c47fed3d6f0ff549c8 223 SUPERFAMILY SSF51161 6 218 1.94E-37 T 17-10-2018 IPR011004 Trimeric LpxA-like superfamily BJD13_08170 3166a87ca104b5c47fed3d6f0ff549c8 223 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 127 161 1.3E-7 T 17-10-2018 IPR001451 Hexapeptide repeat BJD13_08170 3166a87ca104b5c47fed3d6f0ff549c8 223 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 163 197 9.6E-6 T 17-10-2018 IPR001451 Hexapeptide repeat BJD13_18590 71843f85e1911b7ffb34b2194d7550e7 788 Gene3D G3DSA:1.20.1640.10 216 403 1.3E-5 T 17-10-2018 BJD13_18590 71843f85e1911b7ffb34b2194d7550e7 788 SUPERFAMILY SSF82866 613 770 6.67E-17 T 17-10-2018 BJD13_18590 71843f85e1911b7ffb34b2194d7550e7 788 Pfam PF03176 MMPL family 191 415 4.8E-7 T 17-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 BJD13_18590 71843f85e1911b7ffb34b2194d7550e7 788 SUPERFAMILY SSF82866 214 393 1.96E-19 T 17-10-2018 BJD13_07915 bc25cab8148bfafc16e478354011ad2b 164 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 16 160 3.0E-48 T 17-10-2018 IPR008136 CinA, C-terminal BJD13_07915 bc25cab8148bfafc16e478354011ad2b 164 Pfam PF02464 Competence-damaged protein 10 162 1.9E-57 T 17-10-2018 IPR008136 CinA, C-terminal BJD13_07915 bc25cab8148bfafc16e478354011ad2b 164 Gene3D G3DSA:3.90.950.20 1 164 2.4E-59 T 17-10-2018 IPR036653 CinA-like, C-terminal BJD13_07915 bc25cab8148bfafc16e478354011ad2b 164 SUPERFAMILY SSF142433 7 162 2.62E-54 T 17-10-2018 IPR036653 CinA-like, C-terminal BJD13_09150 72ada01ce7295044e85a057186f11827 241 Pfam PF13488 Glycine zipper 50 95 4.1E-11 T 17-10-2018 IPR039567 Glycine zipper domain BJD13_09150 72ada01ce7295044e85a057186f11827 241 Pfam PF00691 OmpA family 125 220 1.5E-24 T 17-10-2018 IPR006665 OmpA-like domain BJD13_09150 72ada01ce7295044e85a057186f11827 241 Gene3D G3DSA:3.30.1330.60 89 234 1.8E-49 T 17-10-2018 IPR036737 OmpA-like domain superfamily BJD13_09150 72ada01ce7295044e85a057186f11827 241 PRINTS PR01021 OMPA domain signature 156 171 1.9E-17 T 17-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BJD13_09150 72ada01ce7295044e85a057186f11827 241 PRINTS PR01021 OMPA domain signature 171 187 1.9E-17 T 17-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BJD13_09150 72ada01ce7295044e85a057186f11827 241 PRINTS PR01021 OMPA domain signature 126 148 1.9E-17 T 17-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BJD13_09150 72ada01ce7295044e85a057186f11827 241 SUPERFAMILY SSF103088 113 229 8.37E-41 T 17-10-2018 IPR036737 OmpA-like domain superfamily BJD13_09150 72ada01ce7295044e85a057186f11827 241 ProSitePatterns PS01068 OmpA-like domain. 158 202 - T 17-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 BJD13_09150 72ada01ce7295044e85a057186f11827 241 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 189 208 5.4E-9 T 17-10-2018 BJD13_09150 72ada01ce7295044e85a057186f11827 241 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 209 229 5.4E-9 T 17-10-2018 BJD13_09150 72ada01ce7295044e85a057186f11827 241 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 171 188 5.4E-9 T 17-10-2018 BJD13_02715 1cd3bedd88a831e9508f9ec31a421ed2 205 Pfam PF06197 Protein of unknown function (DUF998) 14 195 1.9E-14 T 17-10-2018 IPR009339 Protein of unknown function DUF998 BJD13_22665 71b0bcdd3acc8bef71085d5163063c9b 295 Pfam PF08443 RimK-like ATP-grasp domain 98 285 5.1E-58 T 17-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 BJD13_22665 71b0bcdd3acc8bef71085d5163063c9b 295 SUPERFAMILY SSF56059 98 288 1.43E-45 T 17-10-2018 BJD13_22665 71b0bcdd3acc8bef71085d5163063c9b 295 Gene3D G3DSA:3.40.50.20 1 114 2.8E-36 T 17-10-2018 BJD13_22665 71b0bcdd3acc8bef71085d5163063c9b 295 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 2 285 3.3E-77 T 17-10-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 BJD13_22665 71b0bcdd3acc8bef71085d5163063c9b 295 Gene3D G3DSA:3.30.470.80 182 294 1.4E-41 T 17-10-2018 BJD13_22665 71b0bcdd3acc8bef71085d5163063c9b 295 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 52.606 T 17-10-2018 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK BJD13_22665 71b0bcdd3acc8bef71085d5163063c9b 295 Gene3D G3DSA:3.30.1490.20 115 180 4.5E-17 T 17-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BJD13_10880 c43a6344f64a2730b05dcb7b9cdffc4c 1157 SUPERFAMILY SSF52540 452 833 6.48E-34 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_10880 c43a6344f64a2730b05dcb7b9cdffc4c 1157 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 250 339 4.0E-8 T 17-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 BJD13_10880 c43a6344f64a2730b05dcb7b9cdffc4c 1157 SMART SM00490 734 824 1.3E-4 T 17-10-2018 IPR001650 Helicase, C-terminal BJD13_10880 c43a6344f64a2730b05dcb7b9cdffc4c 1157 Pfam PF08463 EcoEI R protein C-terminal 994 1153 1.3E-32 T 17-10-2018 IPR013670 EcoEI R protein C-terminal domain GO:0003677|GO:0003824|GO:0006304 BJD13_10880 c43a6344f64a2730b05dcb7b9cdffc4c 1157 Gene3D G3DSA:3.40.50.300 420 630 2.3E-54 T 17-10-2018 BJD13_10880 c43a6344f64a2730b05dcb7b9cdffc4c 1157 Pfam PF00271 Helicase conserved C-terminal domain 719 822 2.2E-8 T 17-10-2018 IPR001650 Helicase, C-terminal BJD13_10880 c43a6344f64a2730b05dcb7b9cdffc4c 1157 SMART SM00487 435 645 1.6E-15 T 17-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BJD13_10880 c43a6344f64a2730b05dcb7b9cdffc4c 1157 Pfam PF13643 Domain of unknown function (DUF4145) 24 112 7.2E-6 T 17-10-2018 IPR025285 Domain of unknown function DUF4145 BJD13_10880 c43a6344f64a2730b05dcb7b9cdffc4c 1157 Pfam PF04851 Type III restriction enzyme, res subunit 437 617 8.6E-34 T 17-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 BJD13_10880 c43a6344f64a2730b05dcb7b9cdffc4c 1157 Gene3D G3DSA:3.40.50.300 631 855 3.9E-48 T 17-10-2018 BJD13_10880 c43a6344f64a2730b05dcb7b9cdffc4c 1157 Gene3D G3DSA:3.90.1570.30 231 344 2.6E-11 T 17-10-2018 BJD13_13335 f48607eb2c799a76699d5644253c53c0 287 SUPERFAMILY SSF56219 33 285 1.02E-42 T 17-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BJD13_13335 f48607eb2c799a76699d5644253c53c0 287 Gene3D G3DSA:3.60.10.10 32 285 3.3E-83 T 17-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BJD13_13335 f48607eb2c799a76699d5644253c53c0 287 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 37 276 9.0E-19 T 17-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase BJD13_12275 d01cc09ea40a7be93f6a6bd4df493231 216 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 45 207 36.167 T 17-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 BJD13_12275 d01cc09ea40a7be93f6a6bd4df493231 216 Gene3D G3DSA:3.30.1060.10 5 216 4.5E-86 T 17-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 BJD13_12275 d01cc09ea40a7be93f6a6bd4df493231 216 SUPERFAMILY SSF55068 9 211 3.92E-75 T 17-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 BJD13_12275 d01cc09ea40a7be93f6a6bd4df493231 216 Pfam PF01625 Peptide methionine sulfoxide reductase 48 201 3.9E-62 T 17-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 BJD13_12275 d01cc09ea40a7be93f6a6bd4df493231 216 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 47 201 2.5E-60 T 17-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 BJD13_23325 d82ac10064f05a92902793129aa213d8 26 Pfam PF08042 PqqA family 3 21 1.6E-7 T 17-10-2018 IPR011725 Coenzyme PQQ biosynthesis protein A GO:0018189 BJD13_23325 d82ac10064f05a92902793129aa213d8 26 TIGRFAM TIGR02107 PQQ_syn_pqqA: coenzyme PQQ precursor peptide PqqA 4 23 3.6E-8 T 17-10-2018 IPR011725 Coenzyme PQQ biosynthesis protein A GO:0018189 BJD13_08720 c8e714b0e9dbea2a8d27b7b7ee3cf8a6 416 Gene3D G3DSA:2.40.160.10 16 416 4.3E-83 T 17-10-2018 IPR023614 Porin domain superfamily BJD13_08720 c8e714b0e9dbea2a8d27b7b7ee3cf8a6 416 Pfam PF07396 Phosphate-selective porin O and P 41 416 1.4E-99 T 17-10-2018 IPR010870 Phosphate-selective porin O/P BJD13_08720 c8e714b0e9dbea2a8d27b7b7ee3cf8a6 416 SUPERFAMILY SSF56935 31 414 1.65E-9 T 17-10-2018 BJD13_10740 2bb5ea773d5bcaebc9505236f141e396 141 PIRSF PIRSF018297 1 132 2.2E-40 T 17-10-2018 IPR006440 Death on curing protein GO:0016301 BJD13_10740 2bb5ea773d5bcaebc9505236f141e396 141 SUPERFAMILY SSF140931 14 109 2.09E-9 T 17-10-2018 IPR036597 Fido-like domain superfamily BJD13_10740 2bb5ea773d5bcaebc9505236f141e396 141 Pfam PF02661 Fic/DOC family 4 86 7.3E-14 T 17-10-2018 IPR003812 Fido domain BJD13_10740 2bb5ea773d5bcaebc9505236f141e396 141 TIGRFAM TIGR01550 DOC_P1: death-on-curing family protein 12 122 6.2E-17 T 17-10-2018 IPR006440 Death on curing protein GO:0016301 BJD13_10740 2bb5ea773d5bcaebc9505236f141e396 141 Gene3D G3DSA:1.20.120.1870 3 138 8.2E-40 T 17-10-2018 BJD13_13020 875f08fe687770bf2becf00f46e47b9b 417 PIRSF PIRSF000412 2 417 7.1E-169 T 17-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 BJD13_13020 875f08fe687770bf2becf00f46e47b9b 417 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 17-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 BJD13_13020 875f08fe687770bf2becf00f46e47b9b 417 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 417 52.895 T 17-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 BJD13_13020 875f08fe687770bf2becf00f46e47b9b 417 SUPERFAMILY SSF53383 8 417 5.35E-181 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD13_13020 875f08fe687770bf2becf00f46e47b9b 417 Gene3D G3DSA:3.40.640.10 37 289 1.7E-187 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD13_13020 875f08fe687770bf2becf00f46e47b9b 417 Pfam PF00464 Serine hydroxymethyltransferase 8 386 4.9E-183 T 17-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 BJD13_13020 875f08fe687770bf2becf00f46e47b9b 417 Gene3D G3DSA:3.90.1150.10 11 394 1.7E-187 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD13_06400 ba259ae8cba5c39780efb2c4c404387d 314 Pfam PF01584 CheW-like domain 23 159 2.4E-32 T 17-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BJD13_06400 ba259ae8cba5c39780efb2c4c404387d 314 SMART SM00448 182 303 1.1E-13 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_06400 ba259ae8cba5c39780efb2c4c404387d 314 PIRSF PIRSF002867 2 311 1.6E-98 T 17-10-2018 IPR024181 Chemotaxis response regulator CheV BJD13_06400 ba259ae8cba5c39780efb2c4c404387d 314 Gene3D G3DSA:2.40.50.180 42 152 8.2E-26 T 17-10-2018 BJD13_06400 ba259ae8cba5c39780efb2c4c404387d 314 SMART SM00260 18 157 1.6E-22 T 17-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BJD13_06400 ba259ae8cba5c39780efb2c4c404387d 314 Pfam PF00072 Response regulator receiver domain 184 296 8.8E-17 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_06400 ba259ae8cba5c39780efb2c4c404387d 314 SUPERFAMILY SSF50341 18 160 2.49E-32 T 17-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 BJD13_06400 ba259ae8cba5c39780efb2c4c404387d 314 Gene3D G3DSA:3.40.50.2300 177 308 1.6E-21 T 17-10-2018 BJD13_06400 ba259ae8cba5c39780efb2c4c404387d 314 Gene3D G3DSA:2.30.30.40 25 151 8.2E-26 T 17-10-2018 BJD13_06400 ba259ae8cba5c39780efb2c4c404387d 314 SUPERFAMILY SSF52172 181 308 1.85E-22 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_18740 dd0b9f30af214f17355fbf40b65ed86a 312 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 301 2.7E-59 T 17-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 BJD13_18740 dd0b9f30af214f17355fbf40b65ed86a 312 Gene3D G3DSA:3.40.50.720 1 181 3.9E-53 T 17-10-2018 BJD13_18740 dd0b9f30af214f17355fbf40b65ed86a 312 Gene3D G3DSA:1.10.1040.10 183 311 6.5E-17 T 17-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BJD13_18740 dd0b9f30af214f17355fbf40b65ed86a 312 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 155 5.2E-40 T 17-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain BJD13_18740 dd0b9f30af214f17355fbf40b65ed86a 312 SUPERFAMILY SSF48179 184 307 1.7E-22 T 17-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BJD13_18740 dd0b9f30af214f17355fbf40b65ed86a 312 SUPERFAMILY SSF51735 1 171 1.18E-12 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_18740 dd0b9f30af214f17355fbf40b65ed86a 312 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 184 297 1.3E-16 T 17-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain BJD13_18535 4712cf280e177ddbeca049d5b3415671 435 SUPERFAMILY SSF56801 5 429 1.09E-41 T 17-10-2018 BJD13_18535 4712cf280e177ddbeca049d5b3415671 435 Gene3D G3DSA:3.40.50.12780 6 334 1.5E-23 T 17-10-2018 BJD13_18535 4712cf280e177ddbeca049d5b3415671 435 Pfam PF00501 AMP-binding enzyme 100 292 2.1E-18 T 17-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BJD13_18535 4712cf280e177ddbeca049d5b3415671 435 Gene3D G3DSA:3.30.300.30 335 432 4.1E-8 T 17-10-2018 BJD13_06045 8a20d90bfde87a4c471a77f0787b54df 203 Pfam PF00196 Bacterial regulatory proteins, luxR family 143 198 8.5E-17 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_06045 8a20d90bfde87a4c471a77f0787b54df 203 Gene3D G3DSA:1.10.10.10 134 200 1.5E-16 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_06045 8a20d90bfde87a4c471a77f0787b54df 203 SMART SM00421 141 198 3.4E-17 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_06045 8a20d90bfde87a4c471a77f0787b54df 203 SMART SM00448 6 117 4.2E-23 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_06045 8a20d90bfde87a4c471a77f0787b54df 203 SUPERFAMILY SSF46894 132 203 1.94E-17 T 17-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BJD13_06045 8a20d90bfde87a4c471a77f0787b54df 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 158 174 1.2E-8 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_06045 8a20d90bfde87a4c471a77f0787b54df 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 144 158 1.2E-8 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_06045 8a20d90bfde87a4c471a77f0787b54df 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 174 186 1.2E-8 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_06045 8a20d90bfde87a4c471a77f0787b54df 203 SUPERFAMILY SSF52172 8 155 1.71E-31 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_06045 8a20d90bfde87a4c471a77f0787b54df 203 Gene3D G3DSA:3.40.50.2300 2 132 5.7E-44 T 17-10-2018 BJD13_06045 8a20d90bfde87a4c471a77f0787b54df 203 Pfam PF00072 Response regulator receiver domain 8 118 2.4E-22 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_10080 751d09792da2bdc8f1531b639a1f2d04 642 SUPERFAMILY SSF49785 512 624 4.75E-14 T 17-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD13_10080 751d09792da2bdc8f1531b639a1f2d04 642 Gene3D G3DSA:3.20.20.80 36 361 1.3E-115 T 17-10-2018 BJD13_10080 751d09792da2bdc8f1531b639a1f2d04 642 SUPERFAMILY SSF51445 35 353 2.69E-85 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily BJD13_10080 751d09792da2bdc8f1531b639a1f2d04 642 Gene3D G3DSA:2.60.120.260 366 486 5.5E-27 T 17-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD13_10080 751d09792da2bdc8f1531b639a1f2d04 642 SMART SM00812 39 395 9.7E-13 T 17-10-2018 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 BJD13_10080 751d09792da2bdc8f1531b639a1f2d04 642 SUPERFAMILY SSF49785 355 484 1.42E-13 T 17-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD13_10080 751d09792da2bdc8f1531b639a1f2d04 642 Gene3D G3DSA:2.60.120.260 495 639 4.3E-18 T 17-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD13_10080 751d09792da2bdc8f1531b639a1f2d04 642 Pfam PF00754 F5/8 type C domain 366 471 1.1E-8 T 17-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain BJD13_10080 751d09792da2bdc8f1531b639a1f2d04 642 Pfam PF00754 F5/8 type C domain 517 622 8.7E-11 T 17-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain BJD13_10080 751d09792da2bdc8f1531b639a1f2d04 642 Pfam PF01120 Alpha-L-fucosidase 38 350 1.1E-35 T 17-10-2018 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 BJD13_02755 295894df44ceb42dab539378947e61f0 224 Gene3D G3DSA:3.30.1150.10 125 224 3.4E-25 T 17-10-2018 BJD13_02755 295894df44ceb42dab539378947e61f0 224 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 144 223 2.3E-24 T 17-10-2018 IPR037682 TonB, C-terminal GO:0055085 BJD13_02755 295894df44ceb42dab539378947e61f0 224 SUPERFAMILY SSF74653 136 221 6.93E-23 T 17-10-2018 BJD13_02755 295894df44ceb42dab539378947e61f0 224 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 146 224 1.9E-18 T 17-10-2018 IPR006260 TonB/TolA, C-terminal BJD13_14255 f1929fba0a6d68ae2aa490906d2355f4 125 Pfam PF01381 Helix-turn-helix 9 55 9.6E-9 T 17-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BJD13_14255 f1929fba0a6d68ae2aa490906d2355f4 125 Gene3D G3DSA:1.10.260.40 2 66 5.1E-15 T 17-10-2018 BJD13_14255 f1929fba0a6d68ae2aa490906d2355f4 125 SMART SM00530 7 63 2.3E-8 T 17-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BJD13_14255 f1929fba0a6d68ae2aa490906d2355f4 125 SUPERFAMILY SSF47413 3 66 8.45E-12 T 17-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BJD13_13375 b9a77f13a1b8ea312f6b1fb87bcbed1f 401 SUPERFAMILY SSF56601 1 293 3.19E-81 T 17-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BJD13_13375 b9a77f13a1b8ea312f6b1fb87bcbed1f 401 Gene3D G3DSA:3.40.710.10 32 291 4.1E-88 T 17-10-2018 BJD13_13375 b9a77f13a1b8ea312f6b1fb87bcbed1f 401 Gene3D G3DSA:2.60.410.10 293 383 3.8E-33 T 17-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BJD13_13375 b9a77f13a1b8ea312f6b1fb87bcbed1f 401 SMART SM00936 293 383 7.9E-34 T 17-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BJD13_13375 b9a77f13a1b8ea312f6b1fb87bcbed1f 401 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 293 383 3.8E-27 T 17-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BJD13_13375 b9a77f13a1b8ea312f6b1fb87bcbed1f 401 SUPERFAMILY SSF69189 293 385 1.18E-26 T 17-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BJD13_13375 b9a77f13a1b8ea312f6b1fb87bcbed1f 401 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 133 150 1.9E-16 T 17-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 BJD13_13375 b9a77f13a1b8ea312f6b1fb87bcbed1f 401 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 160 173 1.9E-16 T 17-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 BJD13_13375 b9a77f13a1b8ea312f6b1fb87bcbed1f 401 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 75 86 1.9E-16 T 17-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 BJD13_13375 b9a77f13a1b8ea312f6b1fb87bcbed1f 401 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 47 273 5.5E-80 T 17-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 BJD13_22675 c4f09397f7aa24f7ca753e5c4c8aae69 225 Pfam PF00072 Response regulator receiver domain 3 112 1.9E-26 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_22675 c4f09397f7aa24f7ca753e5c4c8aae69 225 SMART SM00862 146 220 2.8E-17 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD13_22675 c4f09397f7aa24f7ca753e5c4c8aae69 225 SUPERFAMILY SSF52172 2 174 1.38E-38 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_22675 c4f09397f7aa24f7ca753e5c4c8aae69 225 Gene3D G3DSA:1.10.10.10 120 223 1.3E-21 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_22675 c4f09397f7aa24f7ca753e5c4c8aae69 225 SMART SM00448 1 113 2.9E-39 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_22675 c4f09397f7aa24f7ca753e5c4c8aae69 225 Gene3D G3DSA:3.40.50.2300 1 119 1.1E-36 T 17-10-2018 BJD13_22675 c4f09397f7aa24f7ca753e5c4c8aae69 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 220 2.5E-17 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD13_06035 6e1bbfb67abec1a81e094075b339979c 494 Gene3D G3DSA:1.20.1600.10 68 479 3.4E-112 T 17-10-2018 BJD13_06035 6e1bbfb67abec1a81e094075b339979c 494 SUPERFAMILY SSF56954 6 481 8.5E-97 T 17-10-2018 BJD13_06035 6e1bbfb67abec1a81e094075b339979c 494 Pfam PF02321 Outer membrane efflux protein 294 477 1.0E-25 T 17-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 BJD13_06035 6e1bbfb67abec1a81e094075b339979c 494 Pfam PF02321 Outer membrane efflux protein 78 266 1.0E-22 T 17-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 BJD13_06035 6e1bbfb67abec1a81e094075b339979c 494 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 13 479 1.1E-127 T 17-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 BJD13_06035 6e1bbfb67abec1a81e094075b339979c 494 Gene3D G3DSA:2.20.200.10 115 368 3.4E-112 T 17-10-2018 BJD13_10780 3a2e6feafec5a50dbd7b933132a86356 842 Gene3D G3DSA:3.40.50.300 12 477 1.0E-180 T 17-10-2018 BJD13_10780 3a2e6feafec5a50dbd7b933132a86356 842 ProSitePatterns PS00211 ABC transporters family signature. 376 390 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD13_10780 3a2e6feafec5a50dbd7b933132a86356 842 Pfam PF00005 ABC transporter 511 759 1.3E-7 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD13_10780 3a2e6feafec5a50dbd7b933132a86356 842 Gene3D G3DSA:3.40.50.300 502 835 1.1E-125 T 17-10-2018 BJD13_10780 3a2e6feafec5a50dbd7b933132a86356 842 ProSitePatterns PS00211 ABC transporters family signature. 729 743 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD13_10780 3a2e6feafec5a50dbd7b933132a86356 842 SUPERFAMILY SSF52540 11 458 2.44E-30 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_10780 3a2e6feafec5a50dbd7b933132a86356 842 SUPERFAMILY SSF52540 506 812 1.12E-42 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_10780 3a2e6feafec5a50dbd7b933132a86356 842 Gene3D G3DSA:1.20.1580.10 613 770 1.1E-125 T 17-10-2018 BJD13_10780 3a2e6feafec5a50dbd7b933132a86356 842 Gene3D G3DSA:1.20.1580.10 98 376 1.0E-180 T 17-10-2018 BJD13_10780 3a2e6feafec5a50dbd7b933132a86356 842 Gene3D G3DSA:1.10.8.280 156 280 1.0E-180 T 17-10-2018 BJD13_22205 2a3a196aa4732eee18a4ad9d311cfad9 312 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 6 302 5.4E-79 T 17-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain BJD13_22205 2a3a196aa4732eee18a4ad9d311cfad9 312 SUPERFAMILY SSF53590 4 309 1.83E-87 T 17-10-2018 IPR036452 Ribonucleoside hydrolase-like BJD13_22205 2a3a196aa4732eee18a4ad9d311cfad9 312 Gene3D G3DSA:3.90.245.10 6 310 7.6E-93 T 17-10-2018 IPR036452 Ribonucleoside hydrolase-like BJD13_03275 fb65644e15435b42853468b4486b55a7 247 SUPERFAMILY SSF51735 12 243 2.45E-43 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_03275 fb65644e15435b42853468b4486b55a7 247 Gene3D G3DSA:3.40.50.720 2 246 5.4E-48 T 17-10-2018 BJD13_03275 fb65644e15435b42853468b4486b55a7 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 186 3.2E-10 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_03275 fb65644e15435b42853468b4486b55a7 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 17 34 3.2E-10 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_03275 fb65644e15435b42853468b4486b55a7 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 188 205 3.2E-10 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_03275 fb65644e15435b42853468b4486b55a7 247 Pfam PF00106 short chain dehydrogenase 16 209 4.6E-35 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_19655 06f7846514cc0244de2ff93694831e66 198 Gene3D G3DSA:3.30.1380.10 1 198 6.5E-65 T 17-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 BJD13_19655 06f7846514cc0244de2ff93694831e66 198 Pfam PF01427 D-ala-D-ala dipeptidase 1 187 1.1E-40 T 17-10-2018 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 BJD13_19655 06f7846514cc0244de2ff93694831e66 198 PIRSF PIRSF026671 1 198 1.2E-70 T 17-10-2018 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 BJD13_19655 06f7846514cc0244de2ff93694831e66 198 SUPERFAMILY SSF55166 1 196 2.83E-59 T 17-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 BJD13_19655 06f7846514cc0244de2ff93694831e66 198 Hamap MF_01924 D-alanyl-D-alanine dipeptidase [ddpX]. 1 196 30.128 T 17-10-2018 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 BJD13_14480 dc98923b294e15dd8a161297577c90c6 210 Pfam PF01613 Flavin reductase like domain 30 174 7.1E-14 T 17-10-2018 IPR002563 Flavin reductase like domain GO:0010181 BJD13_14480 dc98923b294e15dd8a161297577c90c6 210 Gene3D G3DSA:2.30.110.10 19 209 9.5E-55 T 17-10-2018 IPR012349 FMN-binding split barrel GO:0048037 BJD13_14480 dc98923b294e15dd8a161297577c90c6 210 SMART SM00903 28 179 1.4E-9 T 17-10-2018 IPR002563 Flavin reductase like domain GO:0010181 BJD13_14480 dc98923b294e15dd8a161297577c90c6 210 SUPERFAMILY SSF50475 7 194 2.55E-47 T 17-10-2018 BJD13_04255 387a8776536631edc2ab1b04b5020085 252 SUPERFAMILY SSF46626 37 216 8.47E-49 T 17-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BJD13_04255 387a8776536631edc2ab1b04b5020085 252 Pfam PF02167 Cytochrome C1 family 43 251 5.7E-23 T 17-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 BJD13_04255 387a8776536631edc2ab1b04b5020085 252 Gene3D G3DSA:1.10.760.10 36 217 6.3E-26 T 17-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BJD13_04255 387a8776536631edc2ab1b04b5020085 252 PRINTS PR00603 Cytochrome C1 signature 113 137 1.8E-11 T 17-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 BJD13_04255 387a8776536631edc2ab1b04b5020085 252 PRINTS PR00603 Cytochrome C1 signature 198 217 1.8E-11 T 17-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 BJD13_04255 387a8776536631edc2ab1b04b5020085 252 PRINTS PR00603 Cytochrome C1 signature 51 70 1.8E-11 T 17-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 BJD13_04255 387a8776536631edc2ab1b04b5020085 252 PRINTS PR00603 Cytochrome C1 signature 217 232 1.8E-11 T 17-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 BJD13_17725 4a8d83f076b4b5ec6b5179b53b837551 548 Gene3D G3DSA:3.30.420.40 11 266 5.7E-62 T 17-10-2018 BJD13_17725 4a8d83f076b4b5ec6b5179b53b837551 548 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 20 27 - T 17-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 BJD13_17725 4a8d83f076b4b5ec6b5179b53b837551 548 PIRSF PIRSF000538 14 532 1.1E-88 T 17-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 BJD13_17725 4a8d83f076b4b5ec6b5179b53b837551 548 SUPERFAMILY SSF53067 276 528 1.39E-58 T 17-10-2018 BJD13_17725 4a8d83f076b4b5ec6b5179b53b837551 548 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 16 273 2.3E-35 T 17-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 BJD13_17725 4a8d83f076b4b5ec6b5179b53b837551 548 Gene3D G3DSA:3.30.420.40 275 532 4.0E-69 T 17-10-2018 BJD13_17725 4a8d83f076b4b5ec6b5179b53b837551 548 SUPERFAMILY SSF53067 16 275 4.06E-43 T 17-10-2018 BJD13_17725 4a8d83f076b4b5ec6b5179b53b837551 548 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 285 481 2.0E-29 T 17-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 BJD13_16285 efbe014c43d27181eac1d517df248236 732 Pfam PF00128 Alpha amylase, catalytic domain 270 351 7.8E-9 T 17-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BJD13_16285 efbe014c43d27181eac1d517df248236 732 SUPERFAMILY SSF81296 23 116 5.32E-17 T 17-10-2018 IPR014756 Immunoglobulin E-set BJD13_16285 efbe014c43d27181eac1d517df248236 732 SUPERFAMILY SSF51445 173 620 1.15E-113 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily BJD13_16285 efbe014c43d27181eac1d517df248236 732 Gene3D G3DSA:2.60.40.1180 627 731 7.2E-38 T 17-10-2018 IPR013780 Glycosyl hydrolase, all-beta BJD13_16285 efbe014c43d27181eac1d517df248236 732 PIRSF PIRSF000463 15 731 3.9E-289 T 17-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 BJD13_16285 efbe014c43d27181eac1d517df248236 732 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 632 729 3.7E-25 T 17-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 BJD13_16285 efbe014c43d27181eac1d517df248236 732 SMART SM00642 255 608 6.1E-7 T 17-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BJD13_16285 efbe014c43d27181eac1d517df248236 732 Gene3D G3DSA:3.20.20.80 229 626 1.2E-160 T 17-10-2018 BJD13_16285 efbe014c43d27181eac1d517df248236 732 SUPERFAMILY SSF51011 627 730 4.08E-34 T 17-10-2018 BJD13_16285 efbe014c43d27181eac1d517df248236 732 Gene3D G3DSA:2.60.40.10 11 225 2.4E-68 T 17-10-2018 IPR013783 Immunoglobulin-like fold BJD13_16285 efbe014c43d27181eac1d517df248236 732 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 104 731 44.768 T 17-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 BJD13_16285 efbe014c43d27181eac1d517df248236 732 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 128 211 3.2E-22 T 17-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 BJD13_16285 efbe014c43d27181eac1d517df248236 732 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 112 728 1.6E-277 T 17-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 BJD13_14770 bce83e2c51728c78270191332f343f0e 527 Pfam PF08323 Starch synthase catalytic domain 54 284 5.3E-62 T 17-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 BJD13_14770 bce83e2c51728c78270191332f343f0e 527 Hamap MF_00484 Glycogen synthase [glgA]. 51 516 38.167 T 17-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 BJD13_14770 bce83e2c51728c78270191332f343f0e 527 SUPERFAMILY SSF53756 41 520 2.16E-100 T 17-10-2018 BJD13_14770 bce83e2c51728c78270191332f343f0e 527 Pfam PF00534 Glycosyl transferases group 1 338 476 1.3E-13 T 17-10-2018 IPR001296 Glycosyl transferase, family 1 BJD13_14770 bce83e2c51728c78270191332f343f0e 527 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 54 515 1.7E-140 T 17-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 BJD13_14770 bce83e2c51728c78270191332f343f0e 527 Gene3D G3DSA:3.40.50.2000 300 500 7.5E-146 T 17-10-2018 BJD13_14770 bce83e2c51728c78270191332f343f0e 527 Gene3D G3DSA:3.40.50.2000 54 514 7.5E-146 T 17-10-2018 BJD13_12245 cff2201a57f4741d3bcbe0037a808baa 530 Gene3D G3DSA:3.40.30.80 1 200 7.7E-61 T 17-10-2018 BJD13_12245 cff2201a57f4741d3bcbe0037a808baa 530 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 344 364 - T 17-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 BJD13_12245 cff2201a57f4741d3bcbe0037a808baa 530 PIRSF PIRSF000238 1 520 3.3E-270 T 17-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 BJD13_12245 cff2201a57f4741d3bcbe0037a808baa 530 Gene3D G3DSA:3.50.50.60 213 507 1.1E-110 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_12245 cff2201a57f4741d3bcbe0037a808baa 530 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 213 503 1.4E-44 T 17-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BJD13_12245 cff2201a57f4741d3bcbe0037a808baa 530 SUPERFAMILY SSF51905 205 513 3.65E-54 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_12245 cff2201a57f4741d3bcbe0037a808baa 530 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 356 374 6.9E-40 T 17-10-2018 BJD13_12245 cff2201a57f4741d3bcbe0037a808baa 530 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 467 489 6.9E-40 T 17-10-2018 BJD13_12245 cff2201a57f4741d3bcbe0037a808baa 530 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 215 234 6.9E-40 T 17-10-2018 BJD13_12245 cff2201a57f4741d3bcbe0037a808baa 530 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 441 457 6.9E-40 T 17-10-2018 BJD13_12245 cff2201a57f4741d3bcbe0037a808baa 530 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 314 332 6.9E-40 T 17-10-2018 BJD13_12245 cff2201a57f4741d3bcbe0037a808baa 530 Gene3D G3DSA:3.50.50.60 326 449 1.1E-110 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_12245 cff2201a57f4741d3bcbe0037a808baa 530 Pfam PF13192 Thioredoxin domain 125 195 2.0E-8 T 17-10-2018 IPR012336 Thioredoxin-like fold BJD13_12245 cff2201a57f4741d3bcbe0037a808baa 530 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 516 3.3E-242 T 17-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 BJD13_12245 cff2201a57f4741d3bcbe0037a808baa 530 SUPERFAMILY SSF52833 1 101 9.51E-31 T 17-10-2018 IPR036249 Thioredoxin-like superfamily BJD13_12245 cff2201a57f4741d3bcbe0037a808baa 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 214 236 3.7E-64 T 17-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BJD13_12245 cff2201a57f4741d3bcbe0037a808baa 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 246 261 3.7E-64 T 17-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BJD13_12245 cff2201a57f4741d3bcbe0037a808baa 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 352 376 3.7E-64 T 17-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BJD13_12245 cff2201a57f4741d3bcbe0037a808baa 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 443 464 3.7E-64 T 17-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BJD13_12245 cff2201a57f4741d3bcbe0037a808baa 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 477 495 3.7E-64 T 17-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BJD13_12245 cff2201a57f4741d3bcbe0037a808baa 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 337 349 3.7E-64 T 17-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BJD13_12245 cff2201a57f4741d3bcbe0037a808baa 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 404 420 3.7E-64 T 17-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BJD13_12245 cff2201a57f4741d3bcbe0037a808baa 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 266 276 3.7E-64 T 17-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BJD13_12245 cff2201a57f4741d3bcbe0037a808baa 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 315 323 3.7E-64 T 17-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BJD13_12245 cff2201a57f4741d3bcbe0037a808baa 530 SUPERFAMILY SSF52833 106 196 3.63E-22 T 17-10-2018 IPR036249 Thioredoxin-like superfamily BJD13_04430 1dd2f51497ba137896d23004c1700e52 689 Pfam PF13188 PAS domain 148 200 4.5E-4 T 17-10-2018 IPR000014 PAS domain BJD13_04430 1dd2f51497ba137896d23004c1700e52 689 Gene3D G3DSA:3.30.450.20 132 252 9.0E-13 T 17-10-2018 BJD13_04430 1dd2f51497ba137896d23004c1700e52 689 Gene3D G3DSA:3.20.20.450 430 689 8.9E-75 T 17-10-2018 IPR035919 EAL domain superfamily BJD13_04430 1dd2f51497ba137896d23004c1700e52 689 SUPERFAMILY SSF141868 447 680 2.09E-47 T 17-10-2018 IPR035919 EAL domain superfamily BJD13_04430 1dd2f51497ba137896d23004c1700e52 689 SUPERFAMILY SSF55785 132 251 3.24E-12 T 17-10-2018 IPR035965 PAS domain superfamily BJD13_04430 1dd2f51497ba137896d23004c1700e52 689 Pfam PF00990 Diguanylate cyclase, GGDEF domain 271 418 6.0E-17 T 17-10-2018 IPR000160 GGDEF domain BJD13_04430 1dd2f51497ba137896d23004c1700e52 689 Pfam PF00563 EAL domain 447 679 1.8E-52 T 17-10-2018 IPR001633 EAL domain BJD13_04430 1dd2f51497ba137896d23004c1700e52 689 SUPERFAMILY SSF55073 275 431 1.26E-21 T 17-10-2018 IPR029787 Nucleotide cyclase BJD13_04430 1dd2f51497ba137896d23004c1700e52 689 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 267 427 3.3E-16 T 17-10-2018 IPR000160 GGDEF domain BJD13_04430 1dd2f51497ba137896d23004c1700e52 689 SMART SM00052 441 685 5.8E-27 T 17-10-2018 IPR001633 EAL domain BJD13_04430 1dd2f51497ba137896d23004c1700e52 689 SMART SM00267 258 429 9.4E-8 T 17-10-2018 IPR000160 GGDEF domain BJD13_04430 1dd2f51497ba137896d23004c1700e52 689 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 140 248 3.5E-7 T 17-10-2018 IPR000014 PAS domain BJD13_04430 1dd2f51497ba137896d23004c1700e52 689 Gene3D G3DSA:3.30.70.270 260 429 3.0E-30 T 17-10-2018 BJD13_04430 1dd2f51497ba137896d23004c1700e52 689 SUPERFAMILY SSF52172 9 154 1.99E-6 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_23470 3c2caaff74f7f04c0d6a4deb5cc9f05c 354 Pfam PF01112 Asparaginase 59 337 3.7E-80 T 17-10-2018 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 BJD13_23470 3c2caaff74f7f04c0d6a4deb5cc9f05c 354 Gene3D G3DSA:3.60.20.30 208 347 8.7E-51 T 17-10-2018 BJD13_23470 3c2caaff74f7f04c0d6a4deb5cc9f05c 354 SUPERFAMILY SSF56235 48 338 9.52E-86 T 17-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BJD13_16085 4d1d736eb84067d78c51c1c9930c4724 142 SUPERFAMILY SSF54637 11 138 5.66E-31 T 17-10-2018 IPR029069 HotDog domain superfamily BJD13_16085 4d1d736eb84067d78c51c1c9930c4724 142 Pfam PF03061 Thioesterase superfamily 50 127 1.1E-14 T 17-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 BJD13_16085 4d1d736eb84067d78c51c1c9930c4724 142 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 20 135 4.2E-39 T 17-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 BJD13_16085 4d1d736eb84067d78c51c1c9930c4724 142 Gene3D G3DSA:3.10.129.10 1 141 2.6E-54 T 17-10-2018 BJD13_02460 f4079e0a1c2de81a4c2bf99330e9ec10 793 Gene3D G3DSA:2.40.170.20 183 793 2.6E-62 T 17-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BJD13_02460 f4079e0a1c2de81a4c2bf99330e9ec10 793 Pfam PF00593 TonB dependent receptor 367 792 2.0E-30 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_02460 f4079e0a1c2de81a4c2bf99330e9ec10 793 SUPERFAMILY SSF56935 35 793 4.76E-93 T 17-10-2018 BJD13_02460 f4079e0a1c2de81a4c2bf99330e9ec10 793 Gene3D G3DSA:2.170.130.10 33 180 3.5E-16 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_02460 f4079e0a1c2de81a4c2bf99330e9ec10 793 Pfam PF07715 TonB-dependent Receptor Plug Domain 56 166 7.5E-13 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_06030 c70c3824356713b1219450a8f354491e 1030 Pfam PF00873 AcrB/AcrD/AcrF family 6 1015 3.1E-258 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_06030 c70c3824356713b1219450a8f354491e 1030 SUPERFAMILY SSF82866 793 1016 1.83E-47 T 17-10-2018 BJD13_06030 c70c3824356713b1219450a8f354491e 1030 Gene3D G3DSA:3.30.2090.10 709 797 1.8E-271 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_06030 c70c3824356713b1219450a8f354491e 1030 SUPERFAMILY SSF82714 708 793 1.83E-18 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_06030 c70c3824356713b1219450a8f354491e 1030 Gene3D G3DSA:3.30.70.1440 659 856 1.8E-271 T 17-10-2018 BJD13_06030 c70c3824356713b1219450a8f354491e 1030 SUPERFAMILY SSF82714 182 262 1.7E-13 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_06030 c70c3824356713b1219450a8f354491e 1030 Gene3D G3DSA:3.30.70.1430 554 657 1.8E-271 T 17-10-2018 BJD13_06030 c70c3824356713b1219450a8f354491e 1030 SUPERFAMILY SSF82693 551 651 2.41E-10 T 17-10-2018 BJD13_06030 c70c3824356713b1219450a8f354491e 1030 SUPERFAMILY SSF82693 137 324 9.94E-12 T 17-10-2018 BJD13_06030 c70c3824356713b1219450a8f354491e 1030 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 5.2E-22 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_06030 c70c3824356713b1219450a8f354491e 1030 PRINTS PR00702 Acriflavin resistance protein family signature 537 554 5.2E-22 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_06030 c70c3824356713b1219450a8f354491e 1030 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 5.2E-22 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_06030 c70c3824356713b1219450a8f354491e 1030 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 5.2E-22 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_06030 c70c3824356713b1219450a8f354491e 1030 PRINTS PR00702 Acriflavin resistance protein family signature 383 407 5.2E-22 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_06030 c70c3824356713b1219450a8f354491e 1030 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 5.2E-22 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_06030 c70c3824356713b1219450a8f354491e 1030 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1016 1.2E-287 T 17-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 BJD13_06030 c70c3824356713b1219450a8f354491e 1030 Gene3D G3DSA:3.30.2090.10 178 269 1.8E-271 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_06030 c70c3824356713b1219450a8f354491e 1030 Gene3D G3DSA:1.20.1640.10 497 1012 1.8E-271 T 17-10-2018 BJD13_06030 c70c3824356713b1219450a8f354491e 1030 SUPERFAMILY SSF82866 301 490 3.66E-32 T 17-10-2018 BJD13_06030 c70c3824356713b1219450a8f354491e 1030 SUPERFAMILY SSF82693 48 125 6.28E-17 T 17-10-2018 BJD13_06030 c70c3824356713b1219450a8f354491e 1030 Gene3D G3DSA:3.30.70.1320 133 324 1.8E-271 T 17-10-2018 BJD13_06030 c70c3824356713b1219450a8f354491e 1030 Gene3D G3DSA:3.30.70.1430 42 805 1.8E-271 T 17-10-2018 BJD13_06030 c70c3824356713b1219450a8f354491e 1030 Gene3D G3DSA:1.20.1640.10 16 496 1.8E-271 T 17-10-2018 BJD13_08765 19bb90a3f14aac2f29c132594ec199a3 1011 SUPERFAMILY SSF55073 856 1010 1.26E-44 T 17-10-2018 IPR029787 Nucleotide cyclase BJD13_08765 19bb90a3f14aac2f29c132594ec199a3 1011 SUPERFAMILY SSF101898 45 308 1.39E-9 T 17-10-2018 BJD13_08765 19bb90a3f14aac2f29c132594ec199a3 1011 Gene3D G3DSA:2.130.10.10 248 400 5.6E-22 T 17-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BJD13_08765 19bb90a3f14aac2f29c132594ec199a3 1011 Gene3D G3DSA:2.130.10.10 411 660 2.0E-32 T 17-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BJD13_08765 19bb90a3f14aac2f29c132594ec199a3 1011 SUPERFAMILY SSF63829 237 515 5.23E-15 T 17-10-2018 BJD13_08765 19bb90a3f14aac2f29c132594ec199a3 1011 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 848 1009 1.1E-43 T 17-10-2018 IPR000160 GGDEF domain BJD13_08765 19bb90a3f14aac2f29c132594ec199a3 1011 Gene3D G3DSA:3.30.70.270 838 1010 2.4E-52 T 17-10-2018 BJD13_08765 19bb90a3f14aac2f29c132594ec199a3 1011 SMART SM00267 840 1011 3.6E-54 T 17-10-2018 IPR000160 GGDEF domain BJD13_08765 19bb90a3f14aac2f29c132594ec199a3 1011 Gene3D G3DSA:2.60.40.10 690 780 6.6E-19 T 17-10-2018 IPR013783 Immunoglobulin-like fold BJD13_08765 19bb90a3f14aac2f29c132594ec199a3 1011 Pfam PF07495 Y_Y_Y domain 707 768 5.4E-15 T 17-10-2018 IPR011123 Two component regulator three Y BJD13_08765 19bb90a3f14aac2f29c132594ec199a3 1011 Gene3D G3DSA:2.130.10.10 57 239 6.6E-27 T 17-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BJD13_08765 19bb90a3f14aac2f29c132594ec199a3 1011 Pfam PF00990 Diguanylate cyclase, GGDEF domain 851 1007 4.6E-44 T 17-10-2018 IPR000160 GGDEF domain BJD13_08765 19bb90a3f14aac2f29c132594ec199a3 1011 Pfam PF07494 Two component regulator propeller 70 92 0.0022 T 17-10-2018 IPR011110 Two component regulator propeller BJD13_08765 19bb90a3f14aac2f29c132594ec199a3 1011 Pfam PF07494 Two component regulator propeller 363 385 0.0051 T 17-10-2018 IPR011110 Two component regulator propeller BJD13_08765 19bb90a3f14aac2f29c132594ec199a3 1011 Pfam PF07494 Two component regulator propeller 284 303 0.0034 T 17-10-2018 IPR011110 Two component regulator propeller BJD13_09350 875e461edd16e1e3e1cf23aa1a1b0cbc 505 Pfam PF02321 Outer membrane efflux protein 306 482 4.1E-24 T 17-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 BJD13_09350 875e461edd16e1e3e1cf23aa1a1b0cbc 505 Pfam PF02321 Outer membrane efflux protein 83 273 1.3E-28 T 17-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 BJD13_09350 875e461edd16e1e3e1cf23aa1a1b0cbc 505 Gene3D G3DSA:1.20.1600.10 73 485 4.0E-118 T 17-10-2018 BJD13_09350 875e461edd16e1e3e1cf23aa1a1b0cbc 505 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 26 484 1.2E-160 T 17-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 BJD13_09350 875e461edd16e1e3e1cf23aa1a1b0cbc 505 Gene3D G3DSA:2.20.200.10 120 373 4.0E-118 T 17-10-2018 BJD13_09350 875e461edd16e1e3e1cf23aa1a1b0cbc 505 SUPERFAMILY SSF56954 12 486 1.57E-103 T 17-10-2018 BJD13_23000 73d0b278ae1a70ee2a5c9f59fa8bc5db 565 Pfam PF02254 TrkA-N domain 425 537 1.7E-21 T 17-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 BJD13_23000 73d0b278ae1a70ee2a5c9f59fa8bc5db 565 Gene3D G3DSA:3.40.50.720 419 555 6.3E-29 T 17-10-2018 BJD13_23000 73d0b278ae1a70ee2a5c9f59fa8bc5db 565 Pfam PF00999 Sodium/hydrogen exchanger family 12 391 2.8E-81 T 17-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 BJD13_23000 73d0b278ae1a70ee2a5c9f59fa8bc5db 565 SUPERFAMILY SSF51735 422 553 9.86E-27 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_23000 73d0b278ae1a70ee2a5c9f59fa8bc5db 565 Gene3D G3DSA:1.20.1530.20 5 404 3.6E-82 T 17-10-2018 IPR038770 Sodium/solute symporter superfamily BJD13_05290 9d6bdf02f47da252eb15299ea4b2e5d7 335 Gene3D G3DSA:3.40.367.20 106 309 1.2E-96 T 17-10-2018 BJD13_05290 9d6bdf02f47da252eb15299ea4b2e5d7 335 TIGRFAM TIGR00749 glk: glucokinase 9 320 2.0E-80 T 17-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 BJD13_05290 9d6bdf02f47da252eb15299ea4b2e5d7 335 Pfam PF02685 Glucokinase 9 324 1.4E-111 T 17-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 BJD13_05290 9d6bdf02f47da252eb15299ea4b2e5d7 335 SUPERFAMILY SSF53067 8 326 6.39E-60 T 17-10-2018 BJD13_05290 9d6bdf02f47da252eb15299ea4b2e5d7 335 Hamap MF_00524 Glucokinase [glk]. 7 326 33.523 T 17-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 BJD13_05290 9d6bdf02f47da252eb15299ea4b2e5d7 335 Gene3D G3DSA:3.30.420.40 8 320 1.2E-96 T 17-10-2018 BJD13_09120 c856e14f75f60b570e90a4a8857b2581 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 8.0E-30 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_09120 c856e14f75f60b570e90a4a8857b2581 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 8.0E-30 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_09120 c856e14f75f60b570e90a4a8857b2581 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 8.0E-30 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_09120 c856e14f75f60b570e90a4a8857b2581 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 8.0E-30 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_09120 c856e14f75f60b570e90a4a8857b2581 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 8.0E-30 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_09120 c856e14f75f60b570e90a4a8857b2581 243 Pfam PF00106 short chain dehydrogenase 5 205 2.0E-50 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_09120 c856e14f75f60b570e90a4a8857b2581 243 Gene3D G3DSA:3.40.50.720 2 243 4.5E-70 T 17-10-2018 BJD13_09120 c856e14f75f60b570e90a4a8857b2581 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 8.8E-12 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_09120 c856e14f75f60b570e90a4a8857b2581 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 185 8.8E-12 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_09120 c856e14f75f60b570e90a4a8857b2581 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 8.8E-12 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_09120 c856e14f75f60b570e90a4a8857b2581 243 SUPERFAMILY SSF51735 5 243 4.64E-61 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_21865 26dcb7511fe13e6b8b076b41cb862786 215 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 210 44.423 T 17-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 BJD13_21865 26dcb7511fe13e6b8b076b41cb862786 215 Gene3D G3DSA:3.20.19.10 1 184 4.6E-77 T 17-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 BJD13_21865 26dcb7511fe13e6b8b076b41cb862786 215 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 196 9.4E-88 T 17-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 BJD13_21865 26dcb7511fe13e6b8b076b41cb862786 215 SUPERFAMILY SSF52016 1 201 1.39E-62 T 17-10-2018 BJD13_21865 26dcb7511fe13e6b8b076b41cb862786 215 Pfam PF00694 Aconitase C-terminal domain 1 132 7.4E-38 T 17-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 BJD13_19420 d2c1f65e0dc0d0a8fd91d8974ae3753e 321 Gene3D G3DSA:3.90.25.10 178 312 2.0E-94 T 17-10-2018 BJD13_19420 d2c1f65e0dc0d0a8fd91d8974ae3753e 321 Gene3D G3DSA:3.40.50.720 4 300 2.0E-94 T 17-10-2018 BJD13_19420 d2c1f65e0dc0d0a8fd91d8974ae3753e 321 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 246 1.1E-59 T 17-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 BJD13_19420 d2c1f65e0dc0d0a8fd91d8974ae3753e 321 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 7.3E-24 T 17-10-2018 BJD13_19420 d2c1f65e0dc0d0a8fd91d8974ae3753e 321 PRINTS PR01713 Nucleotide sugar epimerase signature 279 296 7.3E-24 T 17-10-2018 BJD13_19420 d2c1f65e0dc0d0a8fd91d8974ae3753e 321 PRINTS PR01713 Nucleotide sugar epimerase signature 240 255 7.3E-24 T 17-10-2018 BJD13_19420 d2c1f65e0dc0d0a8fd91d8974ae3753e 321 PRINTS PR01713 Nucleotide sugar epimerase signature 214 229 7.3E-24 T 17-10-2018 BJD13_19420 d2c1f65e0dc0d0a8fd91d8974ae3753e 321 SUPERFAMILY SSF51735 1 316 1.73E-91 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_04150 0339eda1d838cf7c855a161cd7b935ba 496 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 12 487 5.8E-84 T 17-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 BJD13_04150 0339eda1d838cf7c855a161cd7b935ba 496 Gene3D G3DSA:1.20.1600.10 58 488 3.8E-111 T 17-10-2018 BJD13_04150 0339eda1d838cf7c855a161cd7b935ba 496 Pfam PF02321 Outer membrane efflux protein 309 485 4.5E-25 T 17-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 BJD13_04150 0339eda1d838cf7c855a161cd7b935ba 496 Pfam PF02321 Outer membrane efflux protein 68 276 6.1E-27 T 17-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 BJD13_04150 0339eda1d838cf7c855a161cd7b935ba 496 SUPERFAMILY SSF56954 2 489 2.75E-94 T 17-10-2018 BJD13_04150 0339eda1d838cf7c855a161cd7b935ba 496 Gene3D G3DSA:2.20.200.10 105 376 3.8E-111 T 17-10-2018 BJD13_21740 f96b277c8e01664b6d200efc494d1c0e 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 202 1.9E-17 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_21740 f96b277c8e01664b6d200efc494d1c0e 212 Gene3D G3DSA:3.40.50.12740 4 206 1.4E-48 T 17-10-2018 BJD13_21740 f96b277c8e01664b6d200efc494d1c0e 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 1.3E-10 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_21740 f96b277c8e01664b6d200efc494d1c0e 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 1.3E-10 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_21740 f96b277c8e01664b6d200efc494d1c0e 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 1.3E-10 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_21740 f96b277c8e01664b6d200efc494d1c0e 212 SMART SM00448 4 118 7.1E-18 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_21740 f96b277c8e01664b6d200efc494d1c0e 212 Pfam PF00072 Response regulator receiver domain 6 117 1.5E-18 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_21740 f96b277c8e01664b6d200efc494d1c0e 212 SUPERFAMILY SSF52172 2 150 1.57E-26 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_21740 f96b277c8e01664b6d200efc494d1c0e 212 SMART SM00421 146 203 9.0E-19 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_21740 f96b277c8e01664b6d200efc494d1c0e 212 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_21740 f96b277c8e01664b6d200efc494d1c0e 212 SUPERFAMILY SSF46894 129 204 6.46E-19 T 17-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BJD13_09055 2d0d59258516adb6d9527498a3643401 95 Hamap MF_00460 Protein RnfH [rnfH]. 5 90 19.197 T 17-10-2018 IPR005346 RnfH protein BJD13_09055 2d0d59258516adb6d9527498a3643401 95 SUPERFAMILY SSF54285 5 74 1.23E-15 T 17-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp BJD13_09055 2d0d59258516adb6d9527498a3643401 95 Pfam PF03658 RnfH family Ubiquitin 5 82 1.8E-19 T 17-10-2018 IPR005346 RnfH protein BJD13_09055 2d0d59258516adb6d9527498a3643401 95 Gene3D G3DSA:3.10.20.280 2 84 1.2E-19 T 17-10-2018 IPR037021 RnfH superfamily BJD13_03095 0e0d2cfc8d472a631120457efb5328b3 788 SMART SM00267 341 512 5.6E-41 T 17-10-2018 IPR000160 GGDEF domain BJD13_03095 0e0d2cfc8d472a631120457efb5328b3 788 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 350 500 6.6E-31 T 17-10-2018 IPR000160 GGDEF domain BJD13_03095 0e0d2cfc8d472a631120457efb5328b3 788 SUPERFAMILY SSF141868 528 775 1.31E-84 T 17-10-2018 IPR035919 EAL domain superfamily BJD13_03095 0e0d2cfc8d472a631120457efb5328b3 788 SUPERFAMILY SSF158472 294 342 1.26E-7 T 17-10-2018 BJD13_03095 0e0d2cfc8d472a631120457efb5328b3 788 Gene3D G3DSA:3.30.70.270 349 523 1.4E-43 T 17-10-2018 BJD13_03095 0e0d2cfc8d472a631120457efb5328b3 788 SMART SM00304 294 346 5.8E-11 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_03095 0e0d2cfc8d472a631120457efb5328b3 788 Gene3D G3DSA:1.20.1480.50 259 348 1.7E-9 T 17-10-2018 BJD13_03095 0e0d2cfc8d472a631120457efb5328b3 788 Pfam PF00990 Diguanylate cyclase, GGDEF domain 352 501 9.7E-37 T 17-10-2018 IPR000160 GGDEF domain BJD13_03095 0e0d2cfc8d472a631120457efb5328b3 788 Pfam PF00563 EAL domain 529 762 3.0E-68 T 17-10-2018 IPR001633 EAL domain BJD13_03095 0e0d2cfc8d472a631120457efb5328b3 788 SMART SM00052 522 767 6.3E-102 T 17-10-2018 IPR001633 EAL domain BJD13_03095 0e0d2cfc8d472a631120457efb5328b3 788 Pfam PF00672 HAMP domain 294 341 1.3E-9 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_03095 0e0d2cfc8d472a631120457efb5328b3 788 SUPERFAMILY SSF55073 357 500 2.2E-36 T 17-10-2018 IPR029787 Nucleotide cyclase BJD13_03095 0e0d2cfc8d472a631120457efb5328b3 788 Gene3D G3DSA:3.20.20.450 524 773 4.8E-92 T 17-10-2018 IPR035919 EAL domain superfamily BJD13_03095 0e0d2cfc8d472a631120457efb5328b3 788 Pfam PF14827 Double sensory domain of two-component sensor kinase 53 245 6.1E-12 T 17-10-2018 IPR029150 Double Cache domain 3 BJD13_16685 e14a89b50f4812efd36af8d9190ea351 245 SUPERFAMILY SSF51735 6 244 1.16E-74 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_16685 e14a89b50f4812efd36af8d9190ea351 245 Gene3D G3DSA:3.40.50.720 7 245 3.0E-74 T 17-10-2018 BJD13_16685 e14a89b50f4812efd36af8d9190ea351 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 184 0.0065 T 17-10-2018 BJD13_16685 e14a89b50f4812efd36af8d9190ea351 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 244 1.3E-57 T 17-10-2018 BJD13_16685 e14a89b50f4812efd36af8d9190ea351 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 2.0E-11 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_16685 e14a89b50f4812efd36af8d9190ea351 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 2.0E-11 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_16685 e14a89b50f4812efd36af8d9190ea351 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 2.0E-11 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_16685 e14a89b50f4812efd36af8d9190ea351 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 4.9E-37 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_16685 e14a89b50f4812efd36af8d9190ea351 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.9E-37 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_16685 e14a89b50f4812efd36af8d9190ea351 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 4.9E-37 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_16685 e14a89b50f4812efd36af8d9190ea351 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 4.9E-37 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_16685 e14a89b50f4812efd36af8d9190ea351 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 4.9E-37 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_16685 e14a89b50f4812efd36af8d9190ea351 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 4.9E-37 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_06365 ff9855beddb38973aa7c4141eae0d161 710 SUPERFAMILY SSF55785 222 351 6.63E-8 T 17-10-2018 IPR035965 PAS domain superfamily BJD13_06365 ff9855beddb38973aa7c4141eae0d161 710 SUPERFAMILY SSF55785 103 217 1.68E-14 T 17-10-2018 IPR035965 PAS domain superfamily BJD13_06365 ff9855beddb38973aa7c4141eae0d161 710 Pfam PF13426 PAS domain 375 475 2.2E-7 T 17-10-2018 IPR000014 PAS domain BJD13_06365 ff9855beddb38973aa7c4141eae0d161 710 SUPERFAMILY SSF55785 350 473 1.95E-17 T 17-10-2018 IPR035965 PAS domain superfamily BJD13_06365 ff9855beddb38973aa7c4141eae0d161 710 Gene3D G3DSA:3.30.565.10 574 697 2.8E-32 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_06365 ff9855beddb38973aa7c4141eae0d161 710 SMART SM00091 365 430 1.2E-6 T 17-10-2018 IPR000014 PAS domain BJD13_06365 ff9855beddb38973aa7c4141eae0d161 710 SMART SM00091 110 177 1.4E-8 T 17-10-2018 IPR000014 PAS domain BJD13_06365 ff9855beddb38973aa7c4141eae0d161 710 SMART SM00091 235 301 310.0 T 17-10-2018 IPR000014 PAS domain BJD13_06365 ff9855beddb38973aa7c4141eae0d161 710 Gene3D G3DSA:3.30.450.20 229 349 6.7E-8 T 17-10-2018 BJD13_06365 ff9855beddb38973aa7c4141eae0d161 710 Pfam PF08448 PAS fold 129 225 2.5E-8 T 17-10-2018 IPR013656 PAS fold-4 BJD13_06365 ff9855beddb38973aa7c4141eae0d161 710 PRINTS PR00344 Bacterial sensor protein C-terminal signature 659 677 6.8E-9 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_06365 ff9855beddb38973aa7c4141eae0d161 710 PRINTS PR00344 Bacterial sensor protein C-terminal signature 683 696 6.8E-9 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_06365 ff9855beddb38973aa7c4141eae0d161 710 PRINTS PR00344 Bacterial sensor protein C-terminal signature 644 658 6.8E-9 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_06365 ff9855beddb38973aa7c4141eae0d161 710 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 610 697 1.0E-8 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_06365 ff9855beddb38973aa7c4141eae0d161 710 Pfam PF07730 Histidine kinase 504 569 1.6E-12 T 17-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 BJD13_06365 ff9855beddb38973aa7c4141eae0d161 710 Gene3D G3DSA:3.30.450.20 351 473 1.4E-16 T 17-10-2018 BJD13_06365 ff9855beddb38973aa7c4141eae0d161 710 Gene3D G3DSA:3.30.450.20 101 219 3.6E-12 T 17-10-2018 BJD13_06365 ff9855beddb38973aa7c4141eae0d161 710 SMART SM00387 607 699 4.2E-12 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_06365 ff9855beddb38973aa7c4141eae0d161 710 SUPERFAMILY SSF55874 574 696 1.57E-21 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_06365 ff9855beddb38973aa7c4141eae0d161 710 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 107 210 3.2E-7 T 17-10-2018 IPR000014 PAS domain BJD13_06365 ff9855beddb38973aa7c4141eae0d161 710 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 361 483 4.6E-15 T 17-10-2018 IPR000014 PAS domain BJD13_08970 b03182f2129b1243ffb2aca0bc92b6b9 197 Pfam PF03641 Possible lysine decarboxylase 46 165 5.4E-38 T 17-10-2018 IPR031100 LOG family BJD13_08970 b03182f2129b1243ffb2aca0bc92b6b9 197 SUPERFAMILY SSF102405 1 179 1.08E-61 T 17-10-2018 BJD13_08970 b03182f2129b1243ffb2aca0bc92b6b9 197 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 2 179 3.1E-56 T 17-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG BJD13_08970 b03182f2129b1243ffb2aca0bc92b6b9 197 Gene3D G3DSA:3.40.50.450 1 195 1.8E-74 T 17-10-2018 BJD13_00800 ab33beb911d10f851a870ca3c015eb4a 191 SUPERFAMILY SSF47413 138 187 2.98E-5 T 17-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BJD13_00800 ab33beb911d10f851a870ca3c015eb4a 191 Pfam PF14549 DNA-binding transcriptional regulator Cro 140 188 9.8E-8 T 17-10-2018 BJD13_00800 ab33beb911d10f851a870ca3c015eb4a 191 Gene3D G3DSA:1.10.260.40 139 191 1.9E-6 T 17-10-2018 BJD13_13700 8494bfb77fb7bd5e2190ee267b67e798 231 Gene3D G3DSA:3.60.160.10 21 230 3.2E-29 T 17-10-2018 IPR036983 Mitochondrial biogenesis AIM24 superfamily BJD13_13700 8494bfb77fb7bd5e2190ee267b67e798 231 Pfam PF01987 Mitochondrial biogenesis AIM24 27 221 1.2E-32 T 17-10-2018 IPR002838 Mitochondrial biogenesis protein AIM24 BJD13_13700 8494bfb77fb7bd5e2190ee267b67e798 231 SUPERFAMILY SSF51219 26 228 2.09E-51 T 17-10-2018 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily BJD13_21550 16b03cfaeb265d56344c334647657fd2 714 Pfam PF03552 Cellulose synthase 316 441 1.7E-10 T 17-10-2018 IPR005150 Cellulose synthase GO:0016020|GO:0016760|GO:0030244 BJD13_21550 16b03cfaeb265d56344c334647657fd2 714 Pfam PF07238 PilZ domain 560 656 1.2E-11 T 17-10-2018 IPR009875 PilZ domain GO:0035438 BJD13_21550 16b03cfaeb265d56344c334647657fd2 714 SUPERFAMILY SSF141371 562 648 7.45E-8 T 17-10-2018 BJD13_21550 16b03cfaeb265d56344c334647657fd2 714 Gene3D G3DSA:3.90.550.10 127 348 6.0E-80 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD13_21550 16b03cfaeb265d56344c334647657fd2 714 TIGRFAM TIGR03030 CelA: cellulose synthase catalytic subunit (UDP-forming) 15 697 1.7E-271 T 17-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 BJD13_21550 16b03cfaeb265d56344c334647657fd2 714 PRINTS PR01439 Cellulose synthase subunit A signature 92 117 1.4E-61 T 17-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 BJD13_21550 16b03cfaeb265d56344c334647657fd2 714 PRINTS PR01439 Cellulose synthase subunit A signature 228 252 1.4E-61 T 17-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 BJD13_21550 16b03cfaeb265d56344c334647657fd2 714 PRINTS PR01439 Cellulose synthase subunit A signature 498 522 1.4E-61 T 17-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 BJD13_21550 16b03cfaeb265d56344c334647657fd2 714 PRINTS PR01439 Cellulose synthase subunit A signature 64 84 1.4E-61 T 17-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 BJD13_21550 16b03cfaeb265d56344c334647657fd2 714 PRINTS PR01439 Cellulose synthase subunit A signature 418 437 1.4E-61 T 17-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 BJD13_21550 16b03cfaeb265d56344c334647657fd2 714 PRINTS PR01439 Cellulose synthase subunit A signature 458 477 1.4E-61 T 17-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 BJD13_21550 16b03cfaeb265d56344c334647657fd2 714 PRINTS PR01439 Cellulose synthase subunit A signature 389 415 1.4E-61 T 17-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 BJD13_21550 16b03cfaeb265d56344c334647657fd2 714 PRINTS PR01439 Cellulose synthase subunit A signature 147 166 1.4E-61 T 17-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 BJD13_21550 16b03cfaeb265d56344c334647657fd2 714 PRINTS PR01439 Cellulose synthase subunit A signature 533 554 1.4E-61 T 17-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 BJD13_21550 16b03cfaeb265d56344c334647657fd2 714 Gene3D G3DSA:2.40.10.220 557 665 3.8E-17 T 17-10-2018 BJD13_21550 16b03cfaeb265d56344c334647657fd2 714 SUPERFAMILY SSF53448 140 415 6.93E-50 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD13_21550 16b03cfaeb265d56344c334647657fd2 714 Pfam PF00535 Glycosyl transferase family 2 141 312 2.0E-36 T 17-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BJD13_15585 f01dbceb946ab4b84148e5daef105cdd 190 SUPERFAMILY SSF55120 2 178 1.76E-42 T 17-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD13_15585 f01dbceb946ab4b84148e5daef105cdd 190 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 39 53 - T 17-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 BJD13_15585 f01dbceb946ab4b84148e5daef105cdd 190 Pfam PF00849 RNA pseudouridylate synthase 2 149 1.5E-19 T 17-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD13_15585 f01dbceb946ab4b84148e5daef105cdd 190 Gene3D G3DSA:3.30.70.1560 68 168 1.4E-41 T 17-10-2018 BJD13_15585 f01dbceb946ab4b84148e5daef105cdd 190 Gene3D G3DSA:3.30.70.580 1 67 8.5E-24 T 17-10-2018 BJD13_15585 f01dbceb946ab4b84148e5daef105cdd 190 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 6 177 3.7E-53 T 17-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 BJD13_06465 e29aa86db116c51f336681b4d5b94ade 399 PRINTS PR00207 Flagellin signature 37 54 4.5E-23 T 17-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BJD13_06465 e29aa86db116c51f336681b4d5b94ade 399 PRINTS PR00207 Flagellin signature 76 95 4.5E-23 T 17-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BJD13_06465 e29aa86db116c51f336681b4d5b94ade 399 PRINTS PR00207 Flagellin signature 111 134 4.5E-23 T 17-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BJD13_06465 e29aa86db116c51f336681b4d5b94ade 399 SUPERFAMILY SSF64518 1 399 1.18E-96 T 17-10-2018 BJD13_06465 e29aa86db116c51f336681b4d5b94ade 399 Gene3D G3DSA:1.20.58.1830 2 47 5.5E-5 T 17-10-2018 BJD13_06465 e29aa86db116c51f336681b4d5b94ade 399 Pfam PF07196 Flagellin hook IN motif 198 258 1.5E-5 T 17-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 BJD13_06465 e29aa86db116c51f336681b4d5b94ade 399 Gene3D G3DSA:1.20.1330.10 48 348 3.6E-85 T 17-10-2018 BJD13_06465 e29aa86db116c51f336681b4d5b94ade 399 Pfam PF00700 Bacterial flagellin C-terminal helical region 313 398 5.7E-27 T 17-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BJD13_06465 e29aa86db116c51f336681b4d5b94ade 399 Gene3D G3DSA:1.10.8.410 349 399 8.2E-22 T 17-10-2018 BJD13_06465 e29aa86db116c51f336681b4d5b94ade 399 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 8.4E-40 T 17-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BJD13_06465 e29aa86db116c51f336681b4d5b94ade 399 Gene3D G3DSA:3.30.70.2120 173 297 3.6E-85 T 17-10-2018 BJD13_22075 d8cc5ea2419b138c700848275a5cc944 207 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 8 206 24.596 T 17-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BJD13_22075 d8cc5ea2419b138c700848275a5cc944 207 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 10 200 1.4E-57 T 17-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BJD13_22075 d8cc5ea2419b138c700848275a5cc944 207 Gene3D G3DSA:3.20.20.70 3 205 4.3E-57 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD13_22075 d8cc5ea2419b138c700848275a5cc944 207 SUPERFAMILY SSF51391 5 202 7.85E-57 T 17-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BJD13_22075 d8cc5ea2419b138c700848275a5cc944 207 Pfam PF02581 Thiamine monophosphate synthase 10 188 3.0E-53 T 17-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BJD13_04745 f654224dccc47f27761de23b26104712 400 Pfam PF00561 alpha/beta hydrolase fold 45 385 2.0E-27 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD13_04745 f654224dccc47f27761de23b26104712 400 PIRSF PIRSF000443 1 400 2.4E-138 T 17-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 BJD13_04745 f654224dccc47f27761de23b26104712 400 Hamap MF_00296 Homoserine O-acetyltransferase [metXA]. 6 398 29.738 T 17-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 BJD13_04745 f654224dccc47f27761de23b26104712 400 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 17 308 7.7E-95 T 17-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 BJD13_04745 f654224dccc47f27761de23b26104712 400 SUPERFAMILY SSF53474 12 399 1.16E-86 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_21050 d41578d9df393c6a481e1d6815f85468 359 SUPERFAMILY SSF56672 1 233 7.03E-93 T 17-10-2018 BJD13_21050 d41578d9df393c6a481e1d6815f85468 359 Gene3D G3DSA:3.30.70.270 113 168 3.1E-23 T 17-10-2018 BJD13_21050 d41578d9df393c6a481e1d6815f85468 359 Gene3D G3DSA:2.30.40.20 11 70 7.3E-28 T 17-10-2018 BJD13_21050 d41578d9df393c6a481e1d6815f85468 359 Pfam PF00817 impB/mucB/samB family 7 153 5.5E-53 T 17-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 BJD13_21050 d41578d9df393c6a481e1d6815f85468 359 Pfam PF11799 impB/mucB/samB family C-terminal domain 232 345 9.3E-18 T 17-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 BJD13_21050 d41578d9df393c6a481e1d6815f85468 359 Hamap MF_01113 DNA polymerase IV [dinB]. 1 351 37.727 T 17-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 BJD13_21050 d41578d9df393c6a481e1d6815f85468 359 SUPERFAMILY SSF100879 238 338 5.1E-21 T 17-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 BJD13_21050 d41578d9df393c6a481e1d6815f85468 359 Gene3D G3DSA:3.30.70.270 71 112 1.9E-10 T 17-10-2018 BJD13_21050 d41578d9df393c6a481e1d6815f85468 359 Gene3D G3DSA:3.30.1490.100 240 346 1.7E-18 T 17-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 BJD13_21050 d41578d9df393c6a481e1d6815f85468 359 Gene3D G3DSA:1.10.150.20 169 228 8.1E-19 T 17-10-2018 BJD13_12760 55eb25395c8c298393a7fde4834089de 460 Gene3D G3DSA:3.20.20.80 33 314 1.1E-28 T 17-10-2018 BJD13_12760 55eb25395c8c298393a7fde4834089de 460 SUPERFAMILY SSF51445 34 314 1.53E-38 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily BJD13_12760 55eb25395c8c298393a7fde4834089de 460 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 99 179 2.9E-5 T 17-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 BJD13_12625 2d04c36bcbb3867faf51ad4e06678441 780 Gene3D G3DSA:3.20.20.80 70 399 8.8E-24 T 17-10-2018 BJD13_12625 2d04c36bcbb3867faf51ad4e06678441 780 Pfam PF08307 Glycosyl hydrolase family 98 C-terminal domain 410 562 6.1E-9 T 17-10-2018 IPR013190 Glycosyl hydrolase family 98, C-terminal BJD13_12625 2d04c36bcbb3867faf51ad4e06678441 780 Gene3D G3DSA:2.60.220.10 493 637 1.9E-35 T 17-10-2018 IPR011071 Polysaccharide lyase family 8-like, C-terminal GO:0005975 BJD13_12625 2d04c36bcbb3867faf51ad4e06678441 780 Pfam PF08306 Glycosyl hydrolase family 98 70 385 1.4E-122 T 17-10-2018 IPR013191 Glycosyl hydrolase family 98, central domain BJD13_12625 2d04c36bcbb3867faf51ad4e06678441 780 Gene3D G3DSA:2.60.120.260 642 780 1.2E-23 T 17-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD13_12625 2d04c36bcbb3867faf51ad4e06678441 780 SUPERFAMILY SSF49785 650 769 3.64E-13 T 17-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD13_12625 2d04c36bcbb3867faf51ad4e06678441 780 Pfam PF16990 Carbohydrate binding module (family 35) 664 763 7.0E-9 T 17-10-2018 IPR005084 Carbohydrate binding module family 6 GO:0030246 BJD13_07945 9f5ceec3085c703394171364eca85984 210 Pfam PF01728 FtsJ-like methyltransferase 30 204 9.6E-50 T 17-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 BJD13_07945 9f5ceec3085c703394171364eca85984 210 Gene3D G3DSA:3.40.50.150 26 209 2.4E-53 T 17-10-2018 BJD13_07945 9f5ceec3085c703394171364eca85984 210 PIRSF PIRSF005461 1 210 1.3E-70 T 17-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 BJD13_07945 9f5ceec3085c703394171364eca85984 210 SUPERFAMILY SSF53335 28 204 2.25E-39 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_07945 9f5ceec3085c703394171364eca85984 210 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 13 206 27.757 T 17-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 BJD13_22190 b8b684c20f25a113f02356e0efb7ab40 723 Pfam PF13291 ACT domain 646 722 7.1E-16 T 17-10-2018 IPR002912 ACT domain BJD13_22190 b8b684c20f25a113f02356e0efb7ab40 723 Gene3D G3DSA:3.30.70.260 646 723 1.2E-11 T 17-10-2018 BJD13_22190 b8b684c20f25a113f02356e0efb7ab40 723 Gene3D G3DSA:3.10.20.30 401 475 2.6E-27 T 17-10-2018 IPR012675 Beta-grasp domain superfamily BJD13_22190 b8b684c20f25a113f02356e0efb7ab40 723 Pfam PF04607 Region found in RelA / SpoT proteins 255 363 1.4E-32 T 17-10-2018 IPR007685 RelA/SpoT GO:0015969 BJD13_22190 b8b684c20f25a113f02356e0efb7ab40 723 SUPERFAMILY SSF109604 26 210 3.77E-71 T 17-10-2018 BJD13_22190 b8b684c20f25a113f02356e0efb7ab40 723 SMART SM00954 255 365 1.8E-58 T 17-10-2018 IPR007685 RelA/SpoT GO:0015969 BJD13_22190 b8b684c20f25a113f02356e0efb7ab40 723 Pfam PF13328 HD domain 46 195 1.6E-51 T 17-10-2018 IPR003607 HD/PDEase domain BJD13_22190 b8b684c20f25a113f02356e0efb7ab40 723 SMART SM00471 61 173 1.5E-10 T 17-10-2018 IPR003607 HD/PDEase domain BJD13_22190 b8b684c20f25a113f02356e0efb7ab40 723 Gene3D G3DSA:3.30.460.10 214 345 3.4E-41 T 17-10-2018 BJD13_22190 b8b684c20f25a113f02356e0efb7ab40 723 Pfam PF02824 TGS domain 408 467 3.9E-16 T 17-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 BJD13_22190 b8b684c20f25a113f02356e0efb7ab40 723 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 46 718 2.6E-224 T 17-10-2018 IPR004811 RelA/SpoT family GO:0015969 BJD13_22190 b8b684c20f25a113f02356e0efb7ab40 723 SUPERFAMILY SSF81271 395 467 1.24E-18 T 17-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 BJD13_22190 b8b684c20f25a113f02356e0efb7ab40 723 SUPERFAMILY SSF81301 201 412 4.58E-57 T 17-10-2018 BJD13_22190 b8b684c20f25a113f02356e0efb7ab40 723 SUPERFAMILY SSF55021 651 721 1.07E-7 T 17-10-2018 BJD13_22190 b8b684c20f25a113f02356e0efb7ab40 723 Gene3D G3DSA:1.10.3210.10 24 210 2.5E-77 T 17-10-2018 BJD13_12695 c467607ff3e31cf2b494323db5a0bf48 480 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 238 400 4.7E-81 T 17-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 BJD13_12695 c467607ff3e31cf2b494323db5a0bf48 480 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 260 277 - T 17-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 BJD13_12695 c467607ff3e31cf2b494323db5a0bf48 480 Gene3D G3DSA:3.40.50.720 241 401 2.7E-231 T 17-10-2018 BJD13_12695 c467607ff3e31cf2b494323db5a0bf48 480 SUPERFAMILY SSF52283 10 480 1.25E-113 T 17-10-2018 BJD13_12695 c467607ff3e31cf2b494323db5a0bf48 480 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 12 479 2.4E-146 T 17-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 BJD13_12695 c467607ff3e31cf2b494323db5a0bf48 480 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 8 472 48.14 T 17-10-2018 IPR034373 Adenosylhomocysteinase GO:0004013|GO:0019510|GO:0051287 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-2408508|Reactome: R-HSA-5578997 BJD13_12695 c467607ff3e31cf2b494323db5a0bf48 480 PIRSF PIRSF001109 1 480 3.1E-191 T 17-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 BJD13_12695 c467607ff3e31cf2b494323db5a0bf48 480 Gene3D G3DSA:3.40.50.1480 15 480 2.7E-231 T 17-10-2018 BJD13_12695 c467607ff3e31cf2b494323db5a0bf48 480 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 84 98 - T 17-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 BJD13_12695 c467607ff3e31cf2b494323db5a0bf48 480 SMART SM00996 12 479 0.0 T 17-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 BJD13_12695 c467607ff3e31cf2b494323db5a0bf48 480 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 13 472 9.3E-187 T 17-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 BJD13_12695 c467607ff3e31cf2b494323db5a0bf48 480 SUPERFAMILY SSF51735 238 400 1.07E-79 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_12695 c467607ff3e31cf2b494323db5a0bf48 480 SMART SM00997 238 400 1.7E-110 T 17-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 BJD13_12065 316673723f96b7ff731df0630b4a99ce 432 SUPERFAMILY SSF69075 309 409 9.29E-23 T 17-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BJD13_12065 316673723f96b7ff731df0630b4a99ce 432 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 91 114 - T 17-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BJD13_12065 316673723f96b7ff731df0630b4a99ce 432 Gene3D G3DSA:3.30.460.30 1 150 3.2E-51 T 17-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BJD13_12065 316673723f96b7ff731df0630b4a99ce 432 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 410 29.164 T 17-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BJD13_12065 316673723f96b7ff731df0630b4a99ce 432 SUPERFAMILY SSF69742 1 149 3.14E-46 T 17-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BJD13_12065 316673723f96b7ff731df0630b4a99ce 432 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 164 297 1.0E-46 T 17-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase BJD13_12065 316673723f96b7ff731df0630b4a99ce 432 PIRSF PIRSF000445 1 417 1.0E-146 T 17-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BJD13_12065 316673723f96b7ff731df0630b4a99ce 432 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 148 1.3E-46 T 17-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BJD13_12065 316673723f96b7ff731df0630b4a99ce 432 SUPERFAMILY SSF51735 154 306 4.98E-31 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_12065 316673723f96b7ff731df0630b4a99ce 432 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 312 407 2.6E-18 T 17-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BJD13_12065 316673723f96b7ff731df0630b4a99ce 432 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 402 5.9E-122 T 17-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BJD13_12065 316673723f96b7ff731df0630b4a99ce 432 Gene3D G3DSA:3.40.50.720 154 305 4.4E-43 T 17-10-2018 BJD13_09645 c136f82f4b1aeed38e87e9f90a34889e 694 Pfam PF09334 tRNA synthetases class I (M) 6 395 1.4E-148 T 17-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD13_09645 c136f82f4b1aeed38e87e9f90a34889e 694 SUPERFAMILY SSF47323 388 546 1.53E-39 T 17-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD13_09645 c136f82f4b1aeed38e87e9f90a34889e 694 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 6 535 2.3E-158 T 17-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BJD13_09645 c136f82f4b1aeed38e87e9f90a34889e 694 Gene3D G3DSA:3.40.50.620 6 378 4.4E-139 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD13_09645 c136f82f4b1aeed38e87e9f90a34889e 694 Pfam PF01588 Putative tRNA binding domain 597 691 5.8E-20 T 17-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 BJD13_09645 c136f82f4b1aeed38e87e9f90a34889e 694 Hamap MF_00098 Methionine--tRNA ligase [metG]. 3 545 38.582 T 17-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BJD13_09645 c136f82f4b1aeed38e87e9f90a34889e 694 SUPERFAMILY SSF50249 587 693 4.16E-27 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD13_09645 c136f82f4b1aeed38e87e9f90a34889e 694 Gene3D G3DSA:2.20.28.20 139 173 4.4E-139 T 17-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BJD13_09645 c136f82f4b1aeed38e87e9f90a34889e 694 PRINTS PR01041 Methionyl-tRNA synthetase signature 289 304 8.7E-25 T 17-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BJD13_09645 c136f82f4b1aeed38e87e9f90a34889e 694 PRINTS PR01041 Methionyl-tRNA synthetase signature 250 261 8.7E-25 T 17-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BJD13_09645 c136f82f4b1aeed38e87e9f90a34889e 694 PRINTS PR01041 Methionyl-tRNA synthetase signature 39 53 8.7E-25 T 17-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BJD13_09645 c136f82f4b1aeed38e87e9f90a34889e 694 PRINTS PR01041 Methionyl-tRNA synthetase signature 383 394 8.7E-25 T 17-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BJD13_09645 c136f82f4b1aeed38e87e9f90a34889e 694 PRINTS PR01041 Methionyl-tRNA synthetase signature 87 98 8.7E-25 T 17-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BJD13_09645 c136f82f4b1aeed38e87e9f90a34889e 694 PRINTS PR01041 Methionyl-tRNA synthetase signature 7 20 8.7E-25 T 17-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BJD13_09645 c136f82f4b1aeed38e87e9f90a34889e 694 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 567 693 1.6E-36 T 17-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BJD13_09645 c136f82f4b1aeed38e87e9f90a34889e 694 Gene3D G3DSA:2.40.50.140 584 693 6.8E-28 T 17-10-2018 BJD13_09645 c136f82f4b1aeed38e87e9f90a34889e 694 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 23 - T 17-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD13_09645 c136f82f4b1aeed38e87e9f90a34889e 694 SUPERFAMILY SSF52374 4 385 5.14E-88 T 17-10-2018 BJD13_09645 c136f82f4b1aeed38e87e9f90a34889e 694 SUPERFAMILY SSF57770 139 173 1.1E-11 T 17-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BJD13_09645 c136f82f4b1aeed38e87e9f90a34889e 694 Gene3D G3DSA:1.10.730.10 379 538 1.1E-31 T 17-10-2018 BJD13_14075 9e4f8b33643ac80a7019b63404364ad4 264 Pfam PF04954 Siderophore-interacting protein 140 257 9.8E-35 T 17-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain BJD13_14075 9e4f8b33643ac80a7019b63404364ad4 264 Gene3D G3DSA:3.40.50.80 134 264 3.7E-37 T 17-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BJD13_14075 9e4f8b33643ac80a7019b63404364ad4 264 SUPERFAMILY SSF63380 6 137 5.38E-16 T 17-10-2018 IPR017938 Riboflavin synthase-like beta-barrel BJD13_14075 9e4f8b33643ac80a7019b63404364ad4 264 Pfam PF08021 Siderophore-interacting FAD-binding domain 19 132 1.6E-37 T 17-10-2018 IPR013113 FAD-binding 9, siderophore-interacting BJD13_14075 9e4f8b33643ac80a7019b63404364ad4 264 Gene3D G3DSA:2.40.30.10 2 133 5.0E-43 T 17-10-2018 BJD13_11835 7cdf57728322e036d4ea46c3006cb413 180 SUPERFAMILY SSF54211 92 172 9.1E-25 T 17-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BJD13_11835 7cdf57728322e036d4ea46c3006cb413 180 Pfam PF03719 Ribosomal protein S5, C-terminal domain 102 170 5.5E-28 T 17-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 BJD13_11835 7cdf57728322e036d4ea46c3006cb413 180 Gene3D G3DSA:3.30.230.10 87 179 1.3E-35 T 17-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BJD13_11835 7cdf57728322e036d4ea46c3006cb413 180 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 24 176 6.4E-64 T 17-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 BJD13_11835 7cdf57728322e036d4ea46c3006cb413 180 Pfam PF00333 Ribosomal protein S5, N-terminal domain 26 87 4.2E-25 T 17-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 BJD13_11835 7cdf57728322e036d4ea46c3006cb413 180 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 176 33.995 T 17-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 BJD13_11835 7cdf57728322e036d4ea46c3006cb413 180 ProSitePatterns PS00585 Ribosomal protein S5 signature. 41 73 - T 17-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site BJD13_11835 7cdf57728322e036d4ea46c3006cb413 180 Gene3D G3DSA:3.30.160.20 15 85 2.7E-27 T 17-10-2018 BJD13_11835 7cdf57728322e036d4ea46c3006cb413 180 SUPERFAMILY SSF54768 22 89 1.57E-20 T 17-10-2018 BJD13_03220 06036e3c8ccb1ee0f4f3ec6e25416a1c 130 SUPERFAMILY SSF89919 5 113 2.35E-30 T 17-10-2018 IPR023799 Ribosome-binding factor A domain superfamily BJD13_03220 06036e3c8ccb1ee0f4f3ec6e25416a1c 130 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 7 114 3.6E-30 T 17-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 BJD13_03220 06036e3c8ccb1ee0f4f3ec6e25416a1c 130 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 7 110 26.131 T 17-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 BJD13_03220 06036e3c8ccb1ee0f4f3ec6e25416a1c 130 ProSitePatterns PS01319 Ribosome-binding factor A signature. 76 97 - T 17-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 BJD13_03220 06036e3c8ccb1ee0f4f3ec6e25416a1c 130 Gene3D G3DSA:3.30.300.20 5 116 1.3E-30 T 17-10-2018 IPR015946 K homology domain-like, alpha/beta BJD13_03220 06036e3c8ccb1ee0f4f3ec6e25416a1c 130 Pfam PF02033 Ribosome-binding factor A 8 110 3.4E-30 T 17-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 BJD13_03220 06036e3c8ccb1ee0f4f3ec6e25416a1c 130 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 10 97 3.0E-44 T 17-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 BJD13_03585 707bd15ebc94d639119ddeabff5791e9 349 Gene3D G3DSA:3.40.50.2000 48 154 2.3E-12 T 17-10-2018 BJD13_03585 707bd15ebc94d639119ddeabff5791e9 349 Pfam PF13692 Glycosyl transferases group 1 171 276 2.7E-7 T 17-10-2018 BJD13_03585 707bd15ebc94d639119ddeabff5791e9 349 SUPERFAMILY SSF53756 44 340 1.65E-16 T 17-10-2018 BJD13_03585 707bd15ebc94d639119ddeabff5791e9 349 Gene3D G3DSA:3.40.50.2000 155 292 2.3E-12 T 17-10-2018 BJD13_13490 718cda894f15a9a96918b8f3de1d90ba 296 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 126 281 2.2E-29 T 17-10-2018 IPR000160 GGDEF domain BJD13_13490 718cda894f15a9a96918b8f3de1d90ba 296 SUPERFAMILY SSF55073 135 283 3.37E-34 T 17-10-2018 IPR029787 Nucleotide cyclase BJD13_13490 718cda894f15a9a96918b8f3de1d90ba 296 Gene3D G3DSA:3.30.70.270 121 286 3.7E-45 T 17-10-2018 BJD13_13490 718cda894f15a9a96918b8f3de1d90ba 296 Pfam PF00990 Diguanylate cyclase, GGDEF domain 130 279 2.6E-29 T 17-10-2018 IPR000160 GGDEF domain BJD13_13490 718cda894f15a9a96918b8f3de1d90ba 296 SMART SM00267 119 285 4.1E-26 T 17-10-2018 IPR000160 GGDEF domain BJD13_02560 cc1845b6a0c0b84e89564ef49d67889b 375 Pfam PF01590 GAF domain 47 176 6.2E-10 T 17-10-2018 IPR003018 GAF domain GO:0005515 BJD13_02560 cc1845b6a0c0b84e89564ef49d67889b 375 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 217 373 2.1E-43 T 17-10-2018 IPR000160 GGDEF domain BJD13_02560 cc1845b6a0c0b84e89564ef49d67889b 375 Gene3D G3DSA:3.30.450.40 29 192 2.2E-18 T 17-10-2018 IPR029016 GAF-like domain superfamily BJD13_02560 cc1845b6a0c0b84e89564ef49d67889b 375 SUPERFAMILY SSF55781 47 190 1.13E-25 T 17-10-2018 BJD13_02560 cc1845b6a0c0b84e89564ef49d67889b 375 SMART SM00065 45 188 2.5E-7 T 17-10-2018 IPR003018 GAF domain GO:0005515 BJD13_02560 cc1845b6a0c0b84e89564ef49d67889b 375 SMART SM00267 208 374 5.6E-55 T 17-10-2018 IPR000160 GGDEF domain BJD13_02560 cc1845b6a0c0b84e89564ef49d67889b 375 Gene3D G3DSA:3.30.70.270 204 373 1.2E-53 T 17-10-2018 BJD13_02560 cc1845b6a0c0b84e89564ef49d67889b 375 Pfam PF00990 Diguanylate cyclase, GGDEF domain 220 370 1.1E-40 T 17-10-2018 IPR000160 GGDEF domain BJD13_02560 cc1845b6a0c0b84e89564ef49d67889b 375 SUPERFAMILY SSF55073 224 373 3.14E-45 T 17-10-2018 IPR029787 Nucleotide cyclase BJD13_06230 e6ad523fd36b35aa9be2935ba093b6a4 262 SUPERFAMILY SSF48452 64 253 9.29E-20 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_06230 e6ad523fd36b35aa9be2935ba093b6a4 262 Pfam PF13432 Tetratricopeptide repeat 161 216 0.0098 T 17-10-2018 BJD13_06230 e6ad523fd36b35aa9be2935ba093b6a4 262 Pfam PF13432 Tetratricopeptide repeat 51 113 2.2E-5 T 17-10-2018 BJD13_06230 e6ad523fd36b35aa9be2935ba093b6a4 262 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 39 250 1.4E-50 T 17-10-2018 IPR013360 Pilus biogenesis/stability type IV, PilW BJD13_06230 e6ad523fd36b35aa9be2935ba093b6a4 262 Gene3D G3DSA:1.25.40.10 44 257 3.0E-40 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_06230 e6ad523fd36b35aa9be2935ba093b6a4 262 SMART SM00028 47 80 160.0 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD13_06230 e6ad523fd36b35aa9be2935ba093b6a4 262 SMART SM00028 185 218 310.0 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD13_06230 e6ad523fd36b35aa9be2935ba093b6a4 262 SMART SM00028 81 114 35.0 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD13_06230 e6ad523fd36b35aa9be2935ba093b6a4 262 SMART SM00028 151 184 0.0019 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD13_04820 5887ddfc96379553d7b90b665a247ae6 378 SUPERFAMILY SSF46785 85 160 4.69E-24 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_04820 5887ddfc96379553d7b90b665a247ae6 378 SUPERFAMILY SSF46785 6 82 1.56E-15 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_04820 5887ddfc96379553d7b90b665a247ae6 378 Gene3D G3DSA:1.10.10.10 2 82 3.1E-12 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_04820 5887ddfc96379553d7b90b665a247ae6 378 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 8 171 3.4E-34 T 17-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 BJD13_04820 5887ddfc96379553d7b90b665a247ae6 378 Gene3D G3DSA:1.10.10.10 83 180 4.4E-34 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_04820 5887ddfc96379553d7b90b665a247ae6 378 Pfam PF04079 Segregation and condensation complex subunit ScpB 8 169 2.1E-51 T 17-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 BJD13_01865 0973cf246d7d56b7917e356ab1ffd2ce 237 SUPERFAMILY SSF53448 1 228 7.43E-50 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD13_01865 0973cf246d7d56b7917e356ab1ffd2ce 237 Gene3D G3DSA:3.90.550.10 1 232 1.0E-50 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD13_01865 0973cf246d7d56b7917e356ab1ffd2ce 237 Pfam PF00483 Nucleotidyl transferase 2 121 1.2E-13 T 17-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 BJD13_13530 ea0f9695ff138e91b09f8ddc53d185bb 305 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 6 300 3.9E-110 T 17-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 BJD13_13530 ea0f9695ff138e91b09f8ddc53d185bb 305 Pfam PF00589 Phage integrase family 119 284 6.5E-47 T 17-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 BJD13_13530 ea0f9695ff138e91b09f8ddc53d185bb 305 Gene3D G3DSA:1.10.443.10 118 292 6.3E-57 T 17-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 BJD13_13530 ea0f9695ff138e91b09f8ddc53d185bb 305 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 2 298 59.0 T 17-10-2018 IPR023009 Tyrosine recombinase XerC/XerD BJD13_13530 ea0f9695ff138e91b09f8ddc53d185bb 305 Gene3D G3DSA:1.10.150.130 1 106 2.6E-21 T 17-10-2018 IPR010998 Integrase/recombinase, N-terminal BJD13_13530 ea0f9695ff138e91b09f8ddc53d185bb 305 SUPERFAMILY SSF56349 54 291 1.24E-53 T 17-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BJD13_13530 ea0f9695ff138e91b09f8ddc53d185bb 305 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 4 96 5.5E-18 T 17-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 BJD13_13625 ff4c6c9c47d8cffdd2e99e72a4697dc5 645 SUPERFAMILY SSF53448 143 436 1.69E-23 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD13_13625 ff4c6c9c47d8cffdd2e99e72a4697dc5 645 Gene3D G3DSA:3.90.550.10 138 370 8.8E-16 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD13_13625 ff4c6c9c47d8cffdd2e99e72a4697dc5 645 Pfam PF13632 Glycosyl transferase family group 2 242 465 2.1E-15 T 17-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BJD13_13625 ff4c6c9c47d8cffdd2e99e72a4697dc5 645 Hamap MF_01072 Glucans biosynthesis glucosyltransferase H [mdoH]. 6 645 48.829 T 17-10-2018 IPR023725 Glucan biosynthesis glucosyltransferase H GO:0016758 BJD13_09845 83b555f32e371f046dc140baa4dfbe6c 366 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 217 299 2.6E-13 T 17-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BJD13_09845 83b555f32e371f046dc140baa4dfbe6c 366 SUPERFAMILY SSF53223 3 143 1.15E-46 T 17-10-2018 BJD13_09845 83b555f32e371f046dc140baa4dfbe6c 366 SUPERFAMILY SSF51735 141 344 1.6E-49 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_09845 83b555f32e371f046dc140baa4dfbe6c 366 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 73 86 - T 17-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BJD13_09845 83b555f32e371f046dc140baa4dfbe6c 366 Gene3D G3DSA:3.40.50.720 133 335 9.2E-139 T 17-10-2018 BJD13_09845 83b555f32e371f046dc140baa4dfbe6c 366 Gene3D G3DSA:3.40.50.10860 9 342 9.2E-139 T 17-10-2018 BJD13_09845 83b555f32e371f046dc140baa4dfbe6c 366 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 65 79 8.3E-18 T 17-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BJD13_09845 83b555f32e371f046dc140baa4dfbe6c 366 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 285 296 8.3E-18 T 17-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BJD13_09845 83b555f32e371f046dc140baa4dfbe6c 366 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 175 195 8.3E-18 T 17-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BJD13_09845 83b555f32e371f046dc140baa4dfbe6c 366 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 131 153 8.3E-18 T 17-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BJD13_09845 83b555f32e371f046dc140baa4dfbe6c 366 SMART SM00839 143 350 1.5E-76 T 17-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BJD13_09845 83b555f32e371f046dc140baa4dfbe6c 366 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 12 127 9.0E-27 T 17-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BJD13_09845 83b555f32e371f046dc140baa4dfbe6c 366 PIRSF PIRSF000188 1 351 7.4E-152 T 17-10-2018 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal GO:0016639|GO:0055114 BJD13_17335 87ff58cafd02c354611a3e5f25e91a4c 230 Pfam PF10067 Predicted membrane protein (DUF2306) 60 199 7.3E-19 T 17-10-2018 IPR018750 Protein of unknown function DUF2306, membrane BJD13_21440 1957e50a1afa0b7b7115cb6e54f3c405 143 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 15 37 6.2E-4 T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD13_21440 1957e50a1afa0b7b7115cb6e54f3c405 143 SUPERFAMILY SSF54523 45 141 7.85E-24 T 17-10-2018 BJD13_21440 1957e50a1afa0b7b7115cb6e54f3c405 143 PRINTS PR00813 Bacterial general secretion pathway protein G signature 17 42 1.2E-10 T 17-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 BJD13_21440 1957e50a1afa0b7b7115cb6e54f3c405 143 PRINTS PR00813 Bacterial general secretion pathway protein G signature 53 71 1.2E-10 T 17-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 BJD13_21440 1957e50a1afa0b7b7115cb6e54f3c405 143 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 16 36 - T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD13_21440 1957e50a1afa0b7b7115cb6e54f3c405 143 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 17 142 1.7E-28 T 17-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 BJD13_21440 1957e50a1afa0b7b7115cb6e54f3c405 143 Pfam PF08334 Type II secretion system (T2SS), protein G 40 142 1.0E-28 T 17-10-2018 IPR013545 Type II secretion system protein G BJD13_21440 1957e50a1afa0b7b7115cb6e54f3c405 143 Gene3D G3DSA:3.30.700.10 40 142 2.0E-23 T 17-10-2018 BJD13_14550 d8a04981322110973609ef8ba838db2b 532 Pfam PF07504 Fungalysin/Thermolysin Propeptide Motif 53 92 1.7E-13 T 17-10-2018 IPR011096 FTP domain BJD13_14550 d8a04981322110973609ef8ba838db2b 532 SUPERFAMILY SSF55486 193 531 1.48E-81 T 17-10-2018 BJD13_14550 d8a04981322110973609ef8ba838db2b 532 Gene3D G3DSA:3.10.450.490 19 105 3.4E-5 T 17-10-2018 BJD13_14550 d8a04981322110973609ef8ba838db2b 532 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 357 368 2.6E-19 T 17-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 BJD13_14550 d8a04981322110973609ef8ba838db2b 532 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 336 352 2.6E-19 T 17-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 BJD13_14550 d8a04981322110973609ef8ba838db2b 532 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 299 319 2.6E-19 T 17-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 BJD13_14550 d8a04981322110973609ef8ba838db2b 532 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 426 442 2.6E-19 T 17-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 BJD13_14550 d8a04981322110973609ef8ba838db2b 532 Gene3D G3DSA:3.10.170.10 195 349 3.7E-50 T 17-10-2018 BJD13_14550 d8a04981322110973609ef8ba838db2b 532 Gene3D G3DSA:1.10.390.10 350 531 6.8E-50 T 17-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily BJD13_14550 d8a04981322110973609ef8ba838db2b 532 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 348 531 6.2E-51 T 17-10-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 BJD13_14550 d8a04981322110973609ef8ba838db2b 532 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 197 345 1.1E-47 T 17-10-2018 IPR013856 Peptidase M4 domain GO:0004222 BJD13_09735 24e4b2f81e65e36a220f585e115058f6 457 SUPERFAMILY SSF53474 31 180 3.94E-7 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_09735 24e4b2f81e65e36a220f585e115058f6 457 SUPERFAMILY SSF53474 260 452 8.75E-22 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_09735 24e4b2f81e65e36a220f585e115058f6 457 Gene3D G3DSA:3.40.50.1820 248 455 7.4E-11 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_09735 24e4b2f81e65e36a220f585e115058f6 457 Pfam PF06057 Bacterial virulence protein (VirJ) 266 453 3.7E-84 T 17-10-2018 IPR010333 Bacterial virulence BJD13_09735 24e4b2f81e65e36a220f585e115058f6 457 PIRSF PIRSF029063 1 457 2.6E-178 T 17-10-2018 IPR011225 Type IV secretory pathway, VirJ component BJD13_09735 24e4b2f81e65e36a220f585e115058f6 457 Gene3D G3DSA:3.40.50.1820 28 218 1.3E-5 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_10965 6f485d179320124178f627a084f9833e 160 SUPERFAMILY SSF52833 1 157 4.41E-34 T 17-10-2018 IPR036249 Thioredoxin-like superfamily BJD13_10965 6f485d179320124178f627a084f9833e 160 Pfam PF08534 Redoxin 5 155 9.3E-33 T 17-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 BJD13_10965 6f485d179320124178f627a084f9833e 160 Gene3D G3DSA:3.40.30.10 1 159 5.8E-56 T 17-10-2018 BJD13_14880 657ac0229f3c7aa3049be1e427ca04b8 253 Gene3D G3DSA:3.30.300.30 93 201 1.7E-32 T 17-10-2018 BJD13_14880 657ac0229f3c7aa3049be1e427ca04b8 253 Gene3D G3DSA:3.30.70.1530 20 91 3.3E-20 T 17-10-2018 BJD13_14880 657ac0229f3c7aa3049be1e427ca04b8 253 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 117 130 1.1E-26 T 17-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 BJD13_14880 657ac0229f3c7aa3049be1e427ca04b8 253 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 77 90 1.1E-26 T 17-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 BJD13_14880 657ac0229f3c7aa3049be1e427ca04b8 253 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 165 177 1.1E-26 T 17-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 BJD13_14880 657ac0229f3c7aa3049be1e427ca04b8 253 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 24 34 1.1E-26 T 17-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 BJD13_14880 657ac0229f3c7aa3049be1e427ca04b8 253 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 97 112 1.1E-26 T 17-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 BJD13_14880 657ac0229f3c7aa3049be1e427ca04b8 253 Pfam PF01514 Secretory protein of YscJ/FliF family 8 186 2.2E-28 T 17-10-2018 IPR006182 Secretory protein YscJ/FliF BJD13_14880 657ac0229f3c7aa3049be1e427ca04b8 253 TIGRFAM TIGR02544 III_secr_YscJ: type III secretion apparatus lipoprotein, YscJ/HrcJ family 4 192 2.2E-73 T 17-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 BJD13_01175 52ee172122b415359ef7b4a08ff37583 301 Pfam PF02796 Helix-turn-helix domain of resolvase 177 209 1.3E-5 T 17-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 BJD13_01175 52ee172122b415359ef7b4a08ff37583 301 SMART SM00857 13 166 8.8E-31 T 17-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 BJD13_01175 52ee172122b415359ef7b4a08ff37583 301 ProSitePatterns PS00397 Site-specific recombinases active site. 16 24 - T 17-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 BJD13_01175 52ee172122b415359ef7b4a08ff37583 301 ProSitePatterns PS00398 Site-specific recombinases signature 2. 71 83 - T 17-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 BJD13_01175 52ee172122b415359ef7b4a08ff37583 301 Gene3D G3DSA:3.40.50.1390 11 174 2.8E-28 T 17-10-2018 BJD13_01175 52ee172122b415359ef7b4a08ff37583 301 Pfam PF00239 Resolvase, N terminal domain 14 166 7.9E-23 T 17-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 BJD13_01175 52ee172122b415359ef7b4a08ff37583 301 SUPERFAMILY SSF53041 11 166 2.62E-27 T 17-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 BJD13_23070 bb57a39a8eee1b4255f65544fc03f3c0 818 SUPERFAMILY SSF56935 62 817 1.52E-87 T 17-10-2018 BJD13_23070 bb57a39a8eee1b4255f65544fc03f3c0 818 Pfam PF00593 TonB dependent receptor 340 816 6.4E-34 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_23070 bb57a39a8eee1b4255f65544fc03f3c0 818 Pfam PF07715 TonB-dependent Receptor Plug Domain 78 191 1.4E-13 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_23070 bb57a39a8eee1b4255f65544fc03f3c0 818 Gene3D G3DSA:2.170.130.10 78 204 1.5E-15 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_23550 201a014643da7375dd1d98627d46f029 561 SMART SM00812 87 509 1.8E-218 T 17-10-2018 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 BJD13_23550 201a014643da7375dd1d98627d46f029 561 Pfam PF16757 Alpha-L-fucosidase C-terminal domain 480 554 6.4E-8 T 17-10-2018 IPR031919 Alpha-L-fucosidase, C-terminal KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 BJD13_23550 201a014643da7375dd1d98627d46f029 561 PIRSF PIRSF001092 70 552 6.7E-88 T 17-10-2018 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 BJD13_23550 201a014643da7375dd1d98627d46f029 561 Gene3D G3DSA:3.20.20.80 83 449 3.2E-127 T 17-10-2018 BJD13_23550 201a014643da7375dd1d98627d46f029 561 SUPERFAMILY SSF51445 87 449 8.21E-107 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily BJD13_23550 201a014643da7375dd1d98627d46f029 561 Gene3D G3DSA:2.60.40.1180 450 560 3.2E-30 T 17-10-2018 IPR013780 Glycosyl hydrolase, all-beta BJD13_23550 201a014643da7375dd1d98627d46f029 561 Pfam PF01120 Alpha-L-fucosidase 82 445 7.1E-100 T 17-10-2018 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 BJD13_23395 5927117d4d70035628fbd43ccef0b419 291 Gene3D G3DSA:3.30.1150.10 78 281 1.4E-18 T 17-10-2018 BJD13_23395 5927117d4d70035628fbd43ccef0b419 291 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 204 272 8.2E-16 T 17-10-2018 IPR037682 TonB, C-terminal GO:0055085 BJD13_23395 5927117d4d70035628fbd43ccef0b419 291 SUPERFAMILY SSF74653 178 285 5.23E-21 T 17-10-2018 BJD13_23395 5927117d4d70035628fbd43ccef0b419 291 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 206 281 3.6E-18 T 17-10-2018 IPR006260 TonB/TolA, C-terminal BJD13_20855 7a6e48a7fe0d17bffd5ab0ad0112bcf5 587 Gene3D G3DSA:2.40.50.100 121 199 6.8E-21 T 17-10-2018 BJD13_20855 7a6e48a7fe0d17bffd5ab0ad0112bcf5 587 Pfam PF02817 e3 binding domain 283 317 1.1E-13 T 17-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 BJD13_20855 7a6e48a7fe0d17bffd5ab0ad0112bcf5 587 SUPERFAMILY SSF51230 3 97 2.49E-23 T 17-10-2018 IPR011053 Single hybrid motif BJD13_20855 7a6e48a7fe0d17bffd5ab0ad0112bcf5 587 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 146 175 - T 17-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 BJD13_20855 7a6e48a7fe0d17bffd5ab0ad0112bcf5 587 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 358 586 3.0E-80 T 17-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 BJD13_20855 7a6e48a7fe0d17bffd5ab0ad0112bcf5 587 Gene3D G3DSA:4.10.320.10 283 325 4.7E-17 T 17-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 BJD13_20855 7a6e48a7fe0d17bffd5ab0ad0112bcf5 587 Gene3D G3DSA:2.40.50.100 7 82 7.8E-20 T 17-10-2018 BJD13_20855 7a6e48a7fe0d17bffd5ab0ad0112bcf5 587 Gene3D G3DSA:3.30.559.10 343 587 7.1E-95 T 17-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BJD13_20855 7a6e48a7fe0d17bffd5ab0ad0112bcf5 587 SUPERFAMILY SSF47005 279 321 6.28E-11 T 17-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 BJD13_20855 7a6e48a7fe0d17bffd5ab0ad0112bcf5 587 SUPERFAMILY SSF51230 123 213 1.83E-22 T 17-10-2018 IPR011053 Single hybrid motif BJD13_20855 7a6e48a7fe0d17bffd5ab0ad0112bcf5 587 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 17-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 BJD13_20855 7a6e48a7fe0d17bffd5ab0ad0112bcf5 587 SUPERFAMILY SSF52777 347 587 3.02E-84 T 17-10-2018 BJD13_20855 7a6e48a7fe0d17bffd5ab0ad0112bcf5 587 Pfam PF00364 Biotin-requiring enzyme 9 77 3.0E-20 T 17-10-2018 IPR000089 Biotin/lipoyl attachment BJD13_20855 7a6e48a7fe0d17bffd5ab0ad0112bcf5 587 Pfam PF00364 Biotin-requiring enzyme 126 195 5.1E-21 T 17-10-2018 IPR000089 Biotin/lipoyl attachment BJD13_23530 a22085770e93b7dd0b2bd3de71dd94ef 889 Gene3D G3DSA:3.40.50.1700 362 486 4.7E-19 T 17-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 BJD13_23530 a22085770e93b7dd0b2bd3de71dd94ef 889 Pfam PF07691 PA14 domain 459 612 1.4E-30 T 17-10-2018 IPR011658 PA14 domain BJD13_23530 a22085770e93b7dd0b2bd3de71dd94ef 889 Gene3D G3DSA:2.60.40.10 765 871 1.6E-27 T 17-10-2018 IPR013783 Immunoglobulin-like fold BJD13_23530 a22085770e93b7dd0b2bd3de71dd94ef 889 Pfam PF14310 Fibronectin type III-like domain 799 865 2.7E-19 T 17-10-2018 IPR026891 Fibronectin type III-like domain BJD13_23530 a22085770e93b7dd0b2bd3de71dd94ef 889 SMART SM01217 799 867 4.2E-26 T 17-10-2018 IPR026891 Fibronectin type III-like domain BJD13_23530 a22085770e93b7dd0b2bd3de71dd94ef 889 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 376 762 6.8E-61 T 17-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 BJD13_23530 a22085770e93b7dd0b2bd3de71dd94ef 889 SUPERFAMILY SSF56988 462 639 3.4E-23 T 17-10-2018 BJD13_23530 a22085770e93b7dd0b2bd3de71dd94ef 889 SMART SM00758 459 613 1.3E-24 T 17-10-2018 IPR011658 PA14 domain BJD13_23530 a22085770e93b7dd0b2bd3de71dd94ef 889 Gene3D G3DSA:3.40.50.1700 540 764 1.1E-55 T 17-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 BJD13_23530 a22085770e93b7dd0b2bd3de71dd94ef 889 PRINTS PR00133 Glycosyl hydrolase family 3 signature 187 203 1.6E-9 T 17-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BJD13_23530 a22085770e93b7dd0b2bd3de71dd94ef 889 PRINTS PR00133 Glycosyl hydrolase family 3 signature 258 276 1.6E-9 T 17-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BJD13_23530 a22085770e93b7dd0b2bd3de71dd94ef 889 PRINTS PR00133 Glycosyl hydrolase family 3 signature 91 110 1.6E-9 T 17-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BJD13_23530 a22085770e93b7dd0b2bd3de71dd94ef 889 SUPERFAMILY SSF52279 376 765 2.09E-51 T 17-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 BJD13_23530 a22085770e93b7dd0b2bd3de71dd94ef 889 SUPERFAMILY SSF51445 30 375 2.53E-94 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily BJD13_23530 a22085770e93b7dd0b2bd3de71dd94ef 889 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 52 333 2.0E-44 T 17-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BJD13_23530 a22085770e93b7dd0b2bd3de71dd94ef 889 Gene3D G3DSA:3.20.20.300 24 354 4.7E-94 T 17-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 BJD13_08945 17428b834e123fc24d3c9989351b6e18 497 SMART SM00558 112 241 3.8E-5 T 17-10-2018 IPR003347 JmjC domain BJD13_08945 17428b834e123fc24d3c9989351b6e18 497 Pfam PF08007 Cupin superfamily protein 25 337 1.0E-102 T 17-10-2018 IPR003347 JmjC domain BJD13_08945 17428b834e123fc24d3c9989351b6e18 497 Gene3D G3DSA:2.60.120.650 12 230 8.7E-81 T 17-10-2018 BJD13_08945 17428b834e123fc24d3c9989351b6e18 497 SUPERFAMILY SSF51197 22 317 3.57E-67 T 17-10-2018 BJD13_08945 17428b834e123fc24d3c9989351b6e18 497 Gene3D G3DSA:1.10.10.2510 231 401 2.7E-37 T 17-10-2018 BJD13_21070 da9bcf4b022aa78ad0e897632f434c78 224 Gene3D G3DSA:3.40.50.300 5 221 2.1E-67 T 17-10-2018 BJD13_21070 da9bcf4b022aa78ad0e897632f434c78 224 Pfam PF13500 AAA domain 5 210 1.0E-37 T 17-10-2018 BJD13_21070 da9bcf4b022aa78ad0e897632f434c78 224 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 7 177 1.2E-48 T 17-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 BJD13_21070 da9bcf4b022aa78ad0e897632f434c78 224 PIRSF PIRSF006755 2 221 8.6E-76 T 17-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 BJD13_21070 da9bcf4b022aa78ad0e897632f434c78 224 SUPERFAMILY SSF52540 1 219 7.08E-61 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_21070 da9bcf4b022aa78ad0e897632f434c78 224 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 3 216 27.682 T 17-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 BJD13_20515 8705a8826566562895520dd87128dbcd 1180 Gene3D G3DSA:3.30.450.20 722 853 8.2E-11 T 17-10-2018 BJD13_20515 8705a8826566562895520dd87128dbcd 1180 Gene3D G3DSA:3.40.50.180 12 208 9.8E-18 T 17-10-2018 IPR035909 Methylesterase CheB, C-terminal BJD13_20515 8705a8826566562895520dd87128dbcd 1180 SUPERFAMILY SSF52738 18 208 1.12E-21 T 17-10-2018 IPR035909 Methylesterase CheB, C-terminal BJD13_20515 8705a8826566562895520dd87128dbcd 1180 SMART SM00091 857 924 1.0E-4 T 17-10-2018 IPR000014 PAS domain BJD13_20515 8705a8826566562895520dd87128dbcd 1180 SMART SM00091 523 588 49.0 T 17-10-2018 IPR000014 PAS domain BJD13_20515 8705a8826566562895520dd87128dbcd 1180 SMART SM00091 735 803 2.7 T 17-10-2018 IPR000014 PAS domain BJD13_20515 8705a8826566562895520dd87128dbcd 1180 PRINTS PR00996 Glutamate methyltransferase family signature 245 258 4.1E-26 T 17-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BJD13_20515 8705a8826566562895520dd87128dbcd 1180 PRINTS PR00996 Glutamate methyltransferase family signature 358 374 4.1E-26 T 17-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BJD13_20515 8705a8826566562895520dd87128dbcd 1180 PRINTS PR00996 Glutamate methyltransferase family signature 443 466 4.1E-26 T 17-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BJD13_20515 8705a8826566562895520dd87128dbcd 1180 PRINTS PR00996 Glutamate methyltransferase family signature 322 342 4.1E-26 T 17-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BJD13_20515 8705a8826566562895520dd87128dbcd 1180 PRINTS PR00996 Glutamate methyltransferase family signature 424 438 4.1E-26 T 17-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BJD13_20515 8705a8826566562895520dd87128dbcd 1180 PRINTS PR00996 Glutamate methyltransferase family signature 282 294 4.1E-26 T 17-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BJD13_20515 8705a8826566562895520dd87128dbcd 1180 Gene3D G3DSA:3.30.565.10 1045 1173 8.4E-6 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_20515 8705a8826566562895520dd87128dbcd 1180 Pfam PF08447 PAS fold 880 964 7.8E-17 T 17-10-2018 IPR013655 PAS fold-3 GO:0005515 BJD13_20515 8705a8826566562895520dd87128dbcd 1180 Pfam PF07536 HWE histidine kinase 984 1066 4.9E-21 T 17-10-2018 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 BJD13_20515 8705a8826566562895520dd87128dbcd 1180 SMART SM00911 984 1067 1.2E-27 T 17-10-2018 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 BJD13_20515 8705a8826566562895520dd87128dbcd 1180 SUPERFAMILY SSF55785 722 843 1.26E-6 T 17-10-2018 IPR035965 PAS domain superfamily BJD13_20515 8705a8826566562895520dd87128dbcd 1180 Pfam PF13596 PAS domain 737 843 2.6E-20 T 17-10-2018 BJD13_20515 8705a8826566562895520dd87128dbcd 1180 SUPERFAMILY SSF47757 224 291 2.48E-12 T 17-10-2018 BJD13_20515 8705a8826566562895520dd87128dbcd 1180 Pfam PF01739 CheR methyltransferase, SAM binding domain 290 477 1.6E-52 T 17-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal BJD13_20515 8705a8826566562895520dd87128dbcd 1180 SUPERFAMILY SSF53335 289 482 8.68E-49 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_20515 8705a8826566562895520dd87128dbcd 1180 SUPERFAMILY SSF55785 842 964 4.01E-18 T 17-10-2018 IPR035965 PAS domain superfamily BJD13_20515 8705a8826566562895520dd87128dbcd 1180 Gene3D G3DSA:3.40.50.150 288 486 3.7E-64 T 17-10-2018 BJD13_20515 8705a8826566562895520dd87128dbcd 1180 Pfam PF03705 CheR methyltransferase, all-alpha domain 226 274 1.0E-12 T 17-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal BJD13_20515 8705a8826566562895520dd87128dbcd 1180 SMART SM00138 223 484 1.5E-78 T 17-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BJD13_20515 8705a8826566562895520dd87128dbcd 1180 Gene3D G3DSA:3.30.450.20 854 966 2.9E-23 T 17-10-2018 BJD13_20515 8705a8826566562895520dd87128dbcd 1180 Pfam PF01339 CheB methylesterase 24 199 8.6E-17 T 17-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 BJD13_09045 2c8630d275b3401feb22867dd8d129ee 136 Pfam PF01475 Ferric uptake regulator family 9 129 2.1E-42 T 17-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 BJD13_09045 2c8630d275b3401feb22867dd8d129ee 136 Gene3D G3DSA:3.30.1490.190 85 136 7.6E-17 T 17-10-2018 BJD13_09045 2c8630d275b3401feb22867dd8d129ee 136 SUPERFAMILY SSF46785 6 131 6.13E-38 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_09045 2c8630d275b3401feb22867dd8d129ee 136 Gene3D G3DSA:1.10.10.10 1 82 2.8E-33 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_08785 5aa47b234897700c598907c41dffa131 842 Pfam PF00773 RNB domain 360 687 1.3E-102 T 17-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 BJD13_08785 5aa47b234897700c598907c41dffa131 842 SMART SM00357 186 245 2.6E-12 T 17-10-2018 IPR011129 Cold shock domain GO:0003676 BJD13_08785 5aa47b234897700c598907c41dffa131 842 Gene3D G3DSA:2.40.50.140 738 841 3.7E-19 T 17-10-2018 BJD13_08785 5aa47b234897700c598907c41dffa131 842 ProSitePatterns PS01175 Ribonuclease II family signature. 655 679 - T 17-10-2018 IPR022966 Ribonuclease II/R, conserved site BJD13_08785 5aa47b234897700c598907c41dffa131 842 Pfam PF08206 Ribonuclease B OB domain 187 244 3.3E-22 T 17-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain BJD13_08785 5aa47b234897700c598907c41dffa131 842 Pfam PF00575 S1 RNA binding domain 735 814 2.0E-11 T 17-10-2018 IPR003029 S1 domain GO:0003676 BJD13_08785 5aa47b234897700c598907c41dffa131 842 SUPERFAMILY SSF50249 238 337 3.51E-11 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD13_08785 5aa47b234897700c598907c41dffa131 842 Gene3D G3DSA:2.40.50.140 176 247 2.5E-18 T 17-10-2018 BJD13_08785 5aa47b234897700c598907c41dffa131 842 SUPERFAMILY SSF50249 167 247 8.8E-17 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD13_08785 5aa47b234897700c598907c41dffa131 842 SMART SM00316 734 817 1.9E-11 T 17-10-2018 IPR022967 RNA-binding domain, S1 BJD13_08785 5aa47b234897700c598907c41dffa131 842 SUPERFAMILY SSF50249 737 816 1.72E-18 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD13_08785 5aa47b234897700c598907c41dffa131 842 SMART SM00955 360 688 1.3E-173 T 17-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 BJD13_08785 5aa47b234897700c598907c41dffa131 842 Hamap MF_01895 Ribonuclease R [rnr]. 140 817 57.045 T 17-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 BJD13_08785 5aa47b234897700c598907c41dffa131 842 TIGRFAM TIGR02063 RNase_R: ribonuclease R 121 817 1.4E-258 T 17-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 BJD13_08785 5aa47b234897700c598907c41dffa131 842 SUPERFAMILY SSF50249 325 734 2.34E-138 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD13_08785 5aa47b234897700c598907c41dffa131 842 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 176 816 7.8E-208 T 17-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 BJD13_13080 8c084ba0b5c43a43a5677d0b5b6a100c 456 SUPERFAMILY SSF55931 28 454 9.22E-70 T 17-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 BJD13_13080 8c084ba0b5c43a43a5677d0b5b6a100c 456 Gene3D G3DSA:3.30.590.20 2 456 2.0E-179 T 17-10-2018 BJD13_13080 8c084ba0b5c43a43a5677d0b5b6a100c 456 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 56 359 2.6E-94 T 17-10-2018 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 BJD13_13080 8c084ba0b5c43a43a5677d0b5b6a100c 456 PIRSF PIRSF017901 3 456 1.7E-184 T 17-10-2018 IPR035434 Glutamate--cysteine ligase, bacteria and plant GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 BJD13_13080 8c084ba0b5c43a43a5677d0b5b6a100c 456 TIGRFAM TIGR01436 glu_cys_lig_pln: glutamate--cysteine ligase 13 456 1.0E-211 T 17-10-2018 IPR011556 Glutamate--cysteine ligase, plant-type GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 BJD13_21595 e87bfd73574898cfb68f3e27e4f4417f 171 Gene3D G3DSA:3.90.45.10 1 171 8.5E-61 T 17-10-2018 IPR036821 Peptide deformylase superfamily BJD13_21595 e87bfd73574898cfb68f3e27e4f4417f 171 PIRSF PIRSF004749 1 166 3.8E-42 T 17-10-2018 IPR023635 Peptide deformylase BJD13_21595 e87bfd73574898cfb68f3e27e4f4417f 171 Hamap MF_00163 Peptide deformylase [def]. 1 169 24.674 T 17-10-2018 IPR023635 Peptide deformylase BJD13_21595 e87bfd73574898cfb68f3e27e4f4417f 171 PRINTS PR01576 Peptide deformylase signature 33 62 2.9E-27 T 17-10-2018 IPR023635 Peptide deformylase BJD13_21595 e87bfd73574898cfb68f3e27e4f4417f 171 PRINTS PR01576 Peptide deformylase signature 97 108 2.9E-27 T 17-10-2018 IPR023635 Peptide deformylase BJD13_21595 e87bfd73574898cfb68f3e27e4f4417f 171 PRINTS PR01576 Peptide deformylase signature 109 127 2.9E-27 T 17-10-2018 IPR023635 Peptide deformylase BJD13_21595 e87bfd73574898cfb68f3e27e4f4417f 171 PRINTS PR01576 Peptide deformylase signature 128 157 2.9E-27 T 17-10-2018 IPR023635 Peptide deformylase BJD13_21595 e87bfd73574898cfb68f3e27e4f4417f 171 SUPERFAMILY SSF56420 1 163 3.66E-52 T 17-10-2018 IPR036821 Peptide deformylase superfamily BJD13_21595 e87bfd73574898cfb68f3e27e4f4417f 171 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 3 160 5.8E-33 T 17-10-2018 IPR023635 Peptide deformylase BJD13_21595 e87bfd73574898cfb68f3e27e4f4417f 171 Pfam PF01327 Polypeptide deformylase 3 157 3.1E-43 T 17-10-2018 IPR023635 Peptide deformylase BJD13_11965 f330fd1d12fd30813ae3864250d35946 1383 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 9 1381 0.0 T 17-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD13_11965 f330fd1d12fd30813ae3864250d35946 1383 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 14 1383 12.25 T 17-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD13_11965 f330fd1d12fd30813ae3864250d35946 1383 Gene3D G3DSA:3.90.1100.10 675 741 2.1E-20 T 17-10-2018 BJD13_11965 f330fd1d12fd30813ae3864250d35946 1383 Gene3D G3DSA:3.90.1100.10 19 177 6.0E-55 T 17-10-2018 BJD13_11965 f330fd1d12fd30813ae3864250d35946 1383 Pfam PF04565 RNA polymerase Rpb2, domain 3 541 608 3.0E-29 T 17-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD13_11965 f330fd1d12fd30813ae3864250d35946 1383 Gene3D G3DSA:2.40.270.10 819 861 1.5E-6 T 17-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD13_11965 f330fd1d12fd30813ae3864250d35946 1383 Pfam PF04563 RNA polymerase beta subunit 28 527 2.3E-40 T 17-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD13_11965 f330fd1d12fd30813ae3864250d35946 1383 Gene3D G3DSA:3.90.1800.10 1294 1345 7.2E-11 T 17-10-2018 BJD13_11965 f330fd1d12fd30813ae3864250d35946 1383 Gene3D G3DSA:2.40.270.10 1076 1284 7.9E-86 T 17-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD13_11965 f330fd1d12fd30813ae3864250d35946 1383 Gene3D G3DSA:3.90.1110.10 329 468 1.2E-29 T 17-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD13_11965 f330fd1d12fd30813ae3864250d35946 1383 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1104 1116 - T 17-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD13_11965 f330fd1d12fd30813ae3864250d35946 1383 Gene3D G3DSA:2.40.50.100 742 817 5.4E-29 T 17-10-2018 BJD13_11965 f330fd1d12fd30813ae3864250d35946 1383 Gene3D G3DSA:3.90.1100.10 469 665 1.0E-68 T 17-10-2018 BJD13_11965 f330fd1d12fd30813ae3864250d35946 1383 Pfam PF04561 RNA polymerase Rpb2, domain 2 157 227 8.4E-8 T 17-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD13_11965 f330fd1d12fd30813ae3864250d35946 1383 Pfam PF04561 RNA polymerase Rpb2, domain 2 449 482 5.2E-6 T 17-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD13_11965 f330fd1d12fd30813ae3864250d35946 1383 Pfam PF04561 RNA polymerase Rpb2, domain 2 362 418 5.9E-5 T 17-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD13_11965 f330fd1d12fd30813ae3864250d35946 1383 Pfam PF00562 RNA polymerase Rpb2, domain 6 747 1306 4.0E-158 T 17-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD13_11965 f330fd1d12fd30813ae3864250d35946 1383 Pfam PF10385 RNA polymerase beta subunit external 1 domain 619 684 6.3E-22 T 17-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD13_11965 f330fd1d12fd30813ae3864250d35946 1383 Pfam PF04560 RNA polymerase Rpb2, domain 7 1308 1382 9.5E-27 T 17-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD13_11965 f330fd1d12fd30813ae3864250d35946 1383 SUPERFAMILY SSF64484 13 1382 0.0 T 17-10-2018 BJD13_11965 f330fd1d12fd30813ae3864250d35946 1383 Gene3D G3DSA:2.40.50.150 862 985 1.4E-43 T 17-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD13_07160 3dc0549099b11639ac9883a46f1e6a8f 232 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 117 197 2.6E-8 T 17-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BJD13_07160 3dc0549099b11639ac9883a46f1e6a8f 232 TIGRFAM TIGR01691 enolase-ppase: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 6 228 3.1E-79 T 17-10-2018 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|Reactome: R-HSA-1237112 BJD13_07160 3dc0549099b11639ac9883a46f1e6a8f 232 Hamap MF_01681 Enolase-phosphatase E1 [mtnC]. 3 230 40.066 T 17-10-2018 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|Reactome: R-HSA-1237112 BJD13_07160 3dc0549099b11639ac9883a46f1e6a8f 232 SUPERFAMILY SSF56784 1 230 2.75E-58 T 17-10-2018 IPR036412 HAD-like superfamily BJD13_07160 3dc0549099b11639ac9883a46f1e6a8f 232 Gene3D G3DSA:1.10.720.60 18 100 6.3E-71 T 17-10-2018 BJD13_07160 3dc0549099b11639ac9883a46f1e6a8f 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 1.2E-5 T 17-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BJD13_07160 3dc0549099b11639ac9883a46f1e6a8f 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 115 128 1.2E-5 T 17-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BJD13_07160 3dc0549099b11639ac9883a46f1e6a8f 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 192 205 1.2E-5 T 17-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BJD13_07160 3dc0549099b11639ac9883a46f1e6a8f 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 165 185 1.2E-5 T 17-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BJD13_07160 3dc0549099b11639ac9883a46f1e6a8f 232 Gene3D G3DSA:3.40.50.1000 6 211 6.3E-71 T 17-10-2018 IPR023214 HAD superfamily BJD13_23765 e7b466f9511819da85431a6a24cdb3e6 1189 SUPERFAMILY SSF63829 422 631 7.19E-15 T 17-10-2018 BJD13_23765 e7b466f9511819da85431a6a24cdb3e6 1189 Pfam PF07495 Y_Y_Y domain 707 768 1.5E-14 T 17-10-2018 IPR011123 Two component regulator three Y BJD13_23765 e7b466f9511819da85431a6a24cdb3e6 1189 Gene3D G3DSA:2.60.40.10 673 777 1.9E-18 T 17-10-2018 IPR013783 Immunoglobulin-like fold BJD13_23765 e7b466f9511819da85431a6a24cdb3e6 1189 SMART SM00387 935 1049 2.7E-35 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_23765 e7b466f9511819da85431a6a24cdb3e6 1189 Gene3D G3DSA:3.30.565.10 887 1051 5.0E-44 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_23765 e7b466f9511819da85431a6a24cdb3e6 1189 SMART SM00388 823 888 6.9E-22 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_23765 e7b466f9511819da85431a6a24cdb3e6 1189 Gene3D G3DSA:1.10.287.130 797 886 2.3E-22 T 17-10-2018 BJD13_23765 e7b466f9511819da85431a6a24cdb3e6 1189 Gene3D G3DSA:2.130.10.10 293 540 5.3E-23 T 17-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BJD13_23765 e7b466f9511819da85431a6a24cdb3e6 1189 Pfam PF00072 Response regulator receiver domain 1072 1181 4.1E-20 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_23765 e7b466f9511819da85431a6a24cdb3e6 1189 SUPERFAMILY SSF52172 1069 1186 4.13E-32 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_23765 e7b466f9511819da85431a6a24cdb3e6 1189 SUPERFAMILY SSF50969 65 434 1.33E-11 T 17-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like BJD13_23765 e7b466f9511819da85431a6a24cdb3e6 1189 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 935 1047 7.1E-25 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_23765 e7b466f9511819da85431a6a24cdb3e6 1189 SUPERFAMILY SSF47384 812 889 3.92E-17 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD13_23765 e7b466f9511819da85431a6a24cdb3e6 1189 Gene3D G3DSA:2.130.10.10 35 286 4.9E-46 T 17-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BJD13_23765 e7b466f9511819da85431a6a24cdb3e6 1189 Gene3D G3DSA:3.40.50.12740 1069 1189 1.6E-30 T 17-10-2018 BJD13_23765 e7b466f9511819da85431a6a24cdb3e6 1189 SUPERFAMILY SSF55874 877 1048 8.12E-44 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_23765 e7b466f9511819da85431a6a24cdb3e6 1189 Pfam PF07494 Two component regulator propeller 85 106 0.0056 T 17-10-2018 IPR011110 Two component regulator propeller BJD13_23765 e7b466f9511819da85431a6a24cdb3e6 1189 Pfam PF00512 His Kinase A (phospho-acceptor) domain 823 888 8.6E-17 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_23765 e7b466f9511819da85431a6a24cdb3e6 1189 SMART SM00448 1070 1181 2.8E-29 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_23765 e7b466f9511819da85431a6a24cdb3e6 1189 PRINTS PR00344 Bacterial sensor protein C-terminal signature 973 987 1.9E-14 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_23765 e7b466f9511819da85431a6a24cdb3e6 1189 PRINTS PR00344 Bacterial sensor protein C-terminal signature 991 1001 1.9E-14 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_23765 e7b466f9511819da85431a6a24cdb3e6 1189 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1033 1046 1.9E-14 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_23765 e7b466f9511819da85431a6a24cdb3e6 1189 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1009 1027 1.9E-14 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_14115 3ab4d11325e057efb2269d028e787c08 653 SMART SM00944 61 201 1.1E-34 T 17-10-2018 IPR015366 Peptidase S53, activation domain GO:0008236 Reactome: R-HSA-381038 BJD13_14115 3ab4d11325e057efb2269d028e787c08 653 SUPERFAMILY SSF54897 75 202 9.18E-21 T 17-10-2018 BJD13_14115 3ab4d11325e057efb2269d028e787c08 653 Pfam PF09286 Pro-kumamolisin, activation domain 74 198 1.2E-17 T 17-10-2018 IPR015366 Peptidase S53, activation domain GO:0008236 Reactome: R-HSA-381038 BJD13_14115 3ab4d11325e057efb2269d028e787c08 653 Gene3D G3DSA:3.40.50.200 222 643 4.9E-69 T 17-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BJD13_14115 3ab4d11325e057efb2269d028e787c08 653 SUPERFAMILY SSF52743 235 636 1.83E-45 T 17-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BJD13_22430 fe940d485aa4186796fc186221744722 168 ProDom PD049902 METHYLTRANSFERASE TRANSFERASE PRECURSOR ISOPRENYLCYSTEINE SIGNAL CARBOXYL TRANSMEMBRANE MEMBRANE FAMILY XCC3183 138 168 9.0E-12 T 17-10-2018 BJD13_22430 fe940d485aa4186796fc186221744722 168 Pfam PF04191 Phospholipid methyltransferase 58 156 6.4E-13 T 17-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 BJD13_22430 fe940d485aa4186796fc186221744722 168 Gene3D G3DSA:1.20.120.1630 3 168 4.6E-25 T 17-10-2018 BJD13_08020 6d36042dc2200f445f63f25b0a661887 554 SUPERFAMILY SSF52317 290 542 8.58E-80 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD13_08020 6d36042dc2200f445f63f25b0a661887 554 Pfam PF00117 Glutamine amidotransferase class-I 303 537 7.5E-53 T 17-10-2018 IPR017926 Glutamine amidotransferase BJD13_08020 6d36042dc2200f445f63f25b0a661887 554 Gene3D G3DSA:3.40.50.880 288 546 1.0E-95 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD13_08020 6d36042dc2200f445f63f25b0a661887 554 Gene3D G3DSA:3.40.50.300 1 285 7.1E-124 T 17-10-2018 BJD13_08020 6d36042dc2200f445f63f25b0a661887 554 Hamap MF_01227 CTP synthase [pyrG]. 2 543 50.987 T 17-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 BJD13_08020 6d36042dc2200f445f63f25b0a661887 554 TIGRFAM TIGR00337 PyrG: CTP synthase 4 538 1.3E-238 T 17-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 BJD13_08020 6d36042dc2200f445f63f25b0a661887 554 Pfam PF06418 CTP synthase N-terminus 5 265 2.3E-121 T 17-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 BJD13_08020 6d36042dc2200f445f63f25b0a661887 554 SUPERFAMILY SSF52540 2 266 6.31E-118 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_04050 6966ad33e82bb86ef13811d1d330841c 1364 SMART SM00448 891 1007 3.8E-23 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_04050 6966ad33e82bb86ef13811d1d330841c 1364 SMART SM00448 1032 1147 1.1E-34 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_04050 6966ad33e82bb86ef13811d1d330841c 1364 SUPERFAMILY SSF52172 1031 1153 2.13E-36 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_04050 6966ad33e82bb86ef13811d1d330841c 1364 SMART SM00388 643 708 4.2E-23 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_04050 6966ad33e82bb86ef13811d1d330841c 1364 SMART SM00086 421 463 11.0 T 17-10-2018 IPR001610 PAC motif BJD13_04050 6966ad33e82bb86ef13811d1d330841c 1364 SMART SM00086 581 623 1.9E-6 T 17-10-2018 IPR001610 PAC motif BJD13_04050 6966ad33e82bb86ef13811d1d330841c 1364 Gene3D G3DSA:3.30.450.20 338 492 3.3E-24 T 17-10-2018 BJD13_04050 6966ad33e82bb86ef13811d1d330841c 1364 Gene3D G3DSA:3.40.50.2300 1027 1160 1.4E-38 T 17-10-2018 BJD13_04050 6966ad33e82bb86ef13811d1d330841c 1364 Gene3D G3DSA:1.20.120.160 1178 1287 2.8E-9 T 17-10-2018 IPR036641 HPT domain superfamily GO:0000160 BJD13_04050 6966ad33e82bb86ef13811d1d330841c 1364 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 755 871 3.8E-29 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_04050 6966ad33e82bb86ef13811d1d330841c 1364 SUPERFAMILY SSF52172 890 1018 5.12E-26 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_04050 6966ad33e82bb86ef13811d1d330841c 1364 Gene3D G3DSA:3.30.450.20 493 622 2.9E-26 T 17-10-2018 BJD13_04050 6966ad33e82bb86ef13811d1d330841c 1364 Pfam PF00512 His Kinase A (phospho-acceptor) domain 643 708 1.3E-19 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_04050 6966ad33e82bb86ef13811d1d330841c 1364 Gene3D G3DSA:3.30.565.10 707 874 1.1E-48 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_04050 6966ad33e82bb86ef13811d1d330841c 1364 PRINTS PR00344 Bacterial sensor protein C-terminal signature 797 811 2.0E-14 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_04050 6966ad33e82bb86ef13811d1d330841c 1364 PRINTS PR00344 Bacterial sensor protein C-terminal signature 856 869 2.0E-14 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_04050 6966ad33e82bb86ef13811d1d330841c 1364 PRINTS PR00344 Bacterial sensor protein C-terminal signature 815 825 2.0E-14 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_04050 6966ad33e82bb86ef13811d1d330841c 1364 PRINTS PR00344 Bacterial sensor protein C-terminal signature 832 850 2.0E-14 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_04050 6966ad33e82bb86ef13811d1d330841c 1364 Pfam PF01627 Hpt domain 1203 1281 6.3E-7 T 17-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BJD13_04050 6966ad33e82bb86ef13811d1d330841c 1364 Pfam PF00072 Response regulator receiver domain 1035 1148 1.2E-25 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_04050 6966ad33e82bb86ef13811d1d330841c 1364 Pfam PF00072 Response regulator receiver domain 893 1007 1.6E-17 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_04050 6966ad33e82bb86ef13811d1d330841c 1364 SUPERFAMILY SSF55785 505 631 7.15E-19 T 17-10-2018 IPR035965 PAS domain superfamily BJD13_04050 6966ad33e82bb86ef13811d1d330841c 1364 Pfam PF03924 CHASE domain 87 265 3.8E-41 T 17-10-2018 IPR006189 CHASE domain BJD13_04050 6966ad33e82bb86ef13811d1d330841c 1364 SUPERFAMILY SSF47226 1130 1271 6.93E-11 T 17-10-2018 IPR036641 HPT domain superfamily GO:0000160 BJD13_04050 6966ad33e82bb86ef13811d1d330841c 1364 Gene3D G3DSA:3.40.50.2300 886 1014 7.5E-26 T 17-10-2018 BJD13_04050 6966ad33e82bb86ef13811d1d330841c 1364 Pfam PF13426 PAS domain 506 622 3.6E-13 T 17-10-2018 IPR000014 PAS domain BJD13_04050 6966ad33e82bb86ef13811d1d330841c 1364 Pfam PF13426 PAS domain 361 462 8.7E-12 T 17-10-2018 IPR000014 PAS domain BJD13_04050 6966ad33e82bb86ef13811d1d330841c 1364 SMART SM00387 755 872 1.3E-38 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_04050 6966ad33e82bb86ef13811d1d330841c 1364 Gene3D G3DSA:1.10.287.130 623 706 2.8E-27 T 17-10-2018 BJD13_04050 6966ad33e82bb86ef13811d1d330841c 1364 SUPERFAMILY SSF47384 629 709 3.14E-21 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD13_04050 6966ad33e82bb86ef13811d1d330841c 1364 SMART SM01079 83 271 2.0E-56 T 17-10-2018 IPR006189 CHASE domain BJD13_04050 6966ad33e82bb86ef13811d1d330841c 1364 Gene3D G3DSA:3.30.450.350 87 283 2.0E-27 T 17-10-2018 BJD13_04050 6966ad33e82bb86ef13811d1d330841c 1364 SUPERFAMILY SSF55785 342 461 2.37E-20 T 17-10-2018 IPR035965 PAS domain superfamily BJD13_04050 6966ad33e82bb86ef13811d1d330841c 1364 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 352 469 3.3E-17 T 17-10-2018 IPR000014 PAS domain BJD13_04050 6966ad33e82bb86ef13811d1d330841c 1364 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 496 630 1.2E-16 T 17-10-2018 IPR000014 PAS domain BJD13_04050 6966ad33e82bb86ef13811d1d330841c 1364 SMART SM00091 350 416 1.8E-9 T 17-10-2018 IPR000014 PAS domain BJD13_04050 6966ad33e82bb86ef13811d1d330841c 1364 SMART SM00091 493 560 1.4E-8 T 17-10-2018 IPR000014 PAS domain BJD13_04050 6966ad33e82bb86ef13811d1d330841c 1364 SUPERFAMILY SSF55874 697 868 2.88E-45 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_11080 4e0a36b9dc90399238e44be469afe52e 411 SUPERFAMILY SSF53901 213 410 1.69E-73 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 BJD13_11080 4e0a36b9dc90399238e44be469afe52e 411 SUPERFAMILY SSF53901 3 251 9.27E-77 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 BJD13_11080 4e0a36b9dc90399238e44be469afe52e 411 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3 246 1.0E-58 T 17-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal BJD13_11080 4e0a36b9dc90399238e44be469afe52e 411 Gene3D G3DSA:3.40.47.10 1 254 1.9E-89 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 BJD13_11080 4e0a36b9dc90399238e44be469afe52e 411 Gene3D G3DSA:3.40.47.10 256 400 4.4E-55 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 BJD13_11080 4e0a36b9dc90399238e44be469afe52e 411 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 368 2.6E-38 T 17-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal BJD13_11080 4e0a36b9dc90399238e44be469afe52e 411 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 154 170 - T 17-10-2018 IPR018201 Beta-ketoacyl synthase, active site BJD13_11080 4e0a36b9dc90399238e44be469afe52e 411 SMART SM00825 Beta-ketoacyl synthase 5 411 1.2E-15 T 17-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BJD13_11080 4e0a36b9dc90399238e44be469afe52e 411 PIRSF PIRSF000447 1 411 1.6E-184 T 17-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 BJD13_11080 4e0a36b9dc90399238e44be469afe52e 411 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 3 409 8.9E-198 T 17-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 BJD13_03150 75893420aac947d28a9aabf3d67dd32c 175 Gene3D G3DSA:1.10.10.1590 17 90 1.1E-21 T 17-10-2018 BJD13_03150 75893420aac947d28a9aabf3d67dd32c 175 Gene3D G3DSA:3.40.30.10 92 175 1.7E-23 T 17-10-2018 BJD13_03150 75893420aac947d28a9aabf3d67dd32c 175 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 26 174 5.5E-59 T 17-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_03150 75893420aac947d28a9aabf3d67dd32c 175 PIRSF PIRSF000216 4 175 1.6E-52 T 17-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_03150 75893420aac947d28a9aabf3d67dd32c 175 SUPERFAMILY SSF52833 20 174 2.8E-46 T 17-10-2018 IPR036249 Thioredoxin-like superfamily BJD13_03150 75893420aac947d28a9aabf3d67dd32c 175 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 28 174 3.1E-46 T 17-10-2018 BJD13_10280 923eba5ec5f76a815bec7a36cccf32f0 336 Gene3D G3DSA:3.30.565.10 15 141 5.3E-13 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_10280 923eba5ec5f76a815bec7a36cccf32f0 336 Pfam PF13581 Histidine kinase-like ATPase domain 19 114 1.5E-7 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_10280 923eba5ec5f76a815bec7a36cccf32f0 336 Gene3D G3DSA:3.60.40.10 143 331 3.9E-33 T 17-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BJD13_10280 923eba5ec5f76a815bec7a36cccf32f0 336 SUPERFAMILY SSF81606 156 332 3.14E-7 T 17-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BJD13_10280 923eba5ec5f76a815bec7a36cccf32f0 336 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 170 291 4.1E-7 T 17-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BJD13_09965 df776ed99e5fcc31c1acaf3ddd11565e 240 Gene3D G3DSA:1.20.120.160 143 240 1.3E-12 T 17-10-2018 IPR036641 HPT domain superfamily GO:0000160 BJD13_09965 df776ed99e5fcc31c1acaf3ddd11565e 240 Pfam PF01627 Hpt domain 165 220 5.5E-5 T 17-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BJD13_09965 df776ed99e5fcc31c1acaf3ddd11565e 240 SMART SM00448 11 122 6.1E-16 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_09965 df776ed99e5fcc31c1acaf3ddd11565e 240 Gene3D G3DSA:3.40.50.2300 2 133 5.2E-25 T 17-10-2018 BJD13_09965 df776ed99e5fcc31c1acaf3ddd11565e 240 SUPERFAMILY SSF47226 108 219 8.77E-10 T 17-10-2018 IPR036641 HPT domain superfamily GO:0000160 BJD13_09965 df776ed99e5fcc31c1acaf3ddd11565e 240 Pfam PF00072 Response regulator receiver domain 14 123 3.8E-17 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_09965 df776ed99e5fcc31c1acaf3ddd11565e 240 SUPERFAMILY SSF52172 10 133 1.12E-27 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_04510 c9e94f475d693dff51e1d8ad6165df50 705 SMART SM00304 218 271 6.0E-13 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_04510 c9e94f475d693dff51e1d8ad6165df50 705 Gene3D G3DSA:3.30.70.270 274 455 2.3E-54 T 17-10-2018 BJD13_04510 c9e94f475d693dff51e1d8ad6165df50 705 SMART SM00052 452 697 2.5E-110 T 17-10-2018 IPR001633 EAL domain BJD13_04510 c9e94f475d693dff51e1d8ad6165df50 705 Pfam PF00563 EAL domain 459 692 3.4E-70 T 17-10-2018 IPR001633 EAL domain BJD13_04510 c9e94f475d693dff51e1d8ad6165df50 705 SUPERFAMILY SSF158472 218 267 8.76E-10 T 17-10-2018 BJD13_04510 c9e94f475d693dff51e1d8ad6165df50 705 Pfam PF17203 Single cache domain 3 54 172 1.1E-9 T 17-10-2018 IPR033463 Single cache domain 3 BJD13_04510 c9e94f475d693dff51e1d8ad6165df50 705 SMART SM00267 266 442 1.8E-52 T 17-10-2018 IPR000160 GGDEF domain BJD13_04510 c9e94f475d693dff51e1d8ad6165df50 705 Gene3D G3DSA:1.20.1480.50 187 273 2.4E-12 T 17-10-2018 BJD13_04510 c9e94f475d693dff51e1d8ad6165df50 705 Gene3D G3DSA:3.20.20.450 456 705 4.4E-95 T 17-10-2018 IPR035919 EAL domain superfamily BJD13_04510 c9e94f475d693dff51e1d8ad6165df50 705 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 274 438 6.2E-36 T 17-10-2018 IPR000160 GGDEF domain BJD13_04510 c9e94f475d693dff51e1d8ad6165df50 705 SUPERFAMILY SSF103190 77 173 2.31E-5 T 17-10-2018 IPR029151 Periplasmic sensor-like domain superfamily BJD13_04510 c9e94f475d693dff51e1d8ad6165df50 705 Pfam PF00672 HAMP domain 218 267 1.3E-11 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_04510 c9e94f475d693dff51e1d8ad6165df50 705 Pfam PF00990 Diguanylate cyclase, GGDEF domain 277 437 2.0E-42 T 17-10-2018 IPR000160 GGDEF domain BJD13_04510 c9e94f475d693dff51e1d8ad6165df50 705 SUPERFAMILY SSF141868 457 702 2.48E-86 T 17-10-2018 IPR035919 EAL domain superfamily BJD13_04510 c9e94f475d693dff51e1d8ad6165df50 705 SUPERFAMILY SSF55073 282 443 2.55E-44 T 17-10-2018 IPR029787 Nucleotide cyclase BJD13_07015 0517f9328c2676eb49acf9819e323467 579 Gene3D G3DSA:3.10.310.30 326 458 9.1E-28 T 17-10-2018 BJD13_07015 0517f9328c2676eb49acf9819e323467 579 Gene3D G3DSA:3.90.1640.30 50 324 8.5E-81 T 17-10-2018 BJD13_07015 0517f9328c2676eb49acf9819e323467 579 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 25 570 9.5E-133 T 17-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 BJD13_07015 0517f9328c2676eb49acf9819e323467 579 Pfam PF01368 DHH family 74 207 2.1E-9 T 17-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 BJD13_07015 0517f9328c2676eb49acf9819e323467 579 SUPERFAMILY SSF64182 48 459 3.01E-104 T 17-10-2018 IPR038763 DHH phosphoesterase superfamily BJD13_07015 0517f9328c2676eb49acf9819e323467 579 Pfam PF02272 DHHA1 domain 320 450 3.2E-23 T 17-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 BJD13_10145 5a010435e21b61a3c23cda922845bebd 231 Pfam PF08279 HTH domain 7 60 1.2E-13 T 17-10-2018 IPR013196 Helix-turn-helix, type 11 BJD13_10145 5a010435e21b61a3c23cda922845bebd 231 Gene3D G3DSA:1.10.10.10 1 65 9.0E-16 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_10145 5a010435e21b61a3c23cda922845bebd 231 Pfam PF13280 WYL domain 138 214 1.8E-9 T 17-10-2018 IPR026881 WYL domain BJD13_10145 5a010435e21b61a3c23cda922845bebd 231 SUPERFAMILY SSF46785 3 63 3.59E-10 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_10350 cdeeb2d48630fd2c843adf08ec9c0539 311 SUPERFAMILY SSF81464 30 117 4.09E-23 T 17-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_10350 cdeeb2d48630fd2c843adf08ec9c0539 311 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 148 224 3.1E-7 T 17-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_10350 cdeeb2d48630fd2c843adf08ec9c0539 311 PIRSF PIRSF000292 4 308 3.5E-131 T 17-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 BJD13_10350 cdeeb2d48630fd2c843adf08ec9c0539 311 SUPERFAMILY SSF49503 119 283 1.12E-47 T 17-10-2018 IPR008972 Cupredoxin BJD13_10350 cdeeb2d48630fd2c843adf08ec9c0539 311 Gene3D G3DSA:1.10.287.90 27 112 3.0E-34 T 17-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_10350 cdeeb2d48630fd2c843adf08ec9c0539 311 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 17 238 3.2E-116 T 17-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 BJD13_10350 cdeeb2d48630fd2c843adf08ec9c0539 311 Pfam PF06481 COX Aromatic Rich Motif 238 285 7.9E-16 T 17-10-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 BJD13_10350 cdeeb2d48630fd2c843adf08ec9c0539 311 Gene3D G3DSA:2.60.40.420 113 283 8.6E-55 T 17-10-2018 IPR008972 Cupredoxin BJD13_00315 2efcb07a40914d4f755ad6597bd247d3 142 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 11 135 4.8E-47 T 17-10-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 BJD13_00315 2efcb07a40914d4f755ad6597bd247d3 142 Gene3D G3DSA:1.10.1660.10 3 134 6.7E-36 T 17-10-2018 BJD13_00315 2efcb07a40914d4f755ad6597bd247d3 142 SMART SM00422 10 79 3.2E-31 T 17-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD13_00315 2efcb07a40914d4f755ad6597bd247d3 142 Pfam PF09278 MerR, DNA binding 53 117 6.7E-19 T 17-10-2018 IPR015358 Transcription regulator MerR, DNA binding BJD13_00315 2efcb07a40914d4f755ad6597bd247d3 142 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 22 35 1.3E-8 T 17-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD13_00315 2efcb07a40914d4f755ad6597bd247d3 142 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 11 22 1.3E-8 T 17-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD13_00315 2efcb07a40914d4f755ad6597bd247d3 142 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 46 66 1.3E-8 T 17-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD13_00315 2efcb07a40914d4f755ad6597bd247d3 142 ProSitePatterns PS00552 MerR-type HTH domain signature. 13 35 - T 17-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD13_00315 2efcb07a40914d4f755ad6597bd247d3 142 Pfam PF00376 MerR family regulatory protein 11 48 6.7E-13 T 17-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD13_00315 2efcb07a40914d4f755ad6597bd247d3 142 SUPERFAMILY SSF46955 11 135 1.14E-36 T 17-10-2018 IPR009061 Putative DNA-binding domain superfamily BJD13_08760 5c4b47f77879501d1d8ba91967e55af3 211 SMART SM00479 24 209 9.6E-23 T 17-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BJD13_08760 5c4b47f77879501d1d8ba91967e55af3 211 Hamap MF_00157 Ribonuclease T [rnt]. 1 211 86.299 T 17-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 BJD13_08760 5c4b47f77879501d1d8ba91967e55af3 211 TIGRFAM TIGR01298 RNaseT: ribonuclease T 16 208 9.3E-101 T 17-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 BJD13_08760 5c4b47f77879501d1d8ba91967e55af3 211 SUPERFAMILY SSF53098 15 208 3.39E-53 T 17-10-2018 IPR012337 Ribonuclease H-like superfamily BJD13_08760 5c4b47f77879501d1d8ba91967e55af3 211 Gene3D G3DSA:3.30.420.10 16 209 6.0E-50 T 17-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BJD13_08760 5c4b47f77879501d1d8ba91967e55af3 211 Pfam PF00929 Exonuclease 26 200 4.6E-24 T 17-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BJD13_03630 1744249f5f44947b61aa81f22fdadf12 319 Gene3D G3DSA:3.40.50.720 1 318 3.3E-50 T 17-10-2018 BJD13_03630 1744249f5f44947b61aa81f22fdadf12 319 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 213 9.3E-27 T 17-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 BJD13_03630 1744249f5f44947b61aa81f22fdadf12 319 SUPERFAMILY SSF51735 1 316 1.3E-48 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_20555 2d3188839f27e1f1b99aa1d28e791625 404 SUPERFAMILY SSF51971 127 343 1.29E-19 T 17-10-2018 BJD13_20555 2d3188839f27e1f1b99aa1d28e791625 404 Gene3D G3DSA:3.40.50.720 63 126 3.5E-13 T 17-10-2018 BJD13_20555 2d3188839f27e1f1b99aa1d28e791625 404 ProSitePatterns PS00677 D-amino acid oxidases signature. 91 109 - T 17-10-2018 IPR006181 D-amino acid oxidase, conserved site GO:0003884|GO:0055114 Reactome: R-HSA-389661|Reactome: R-HSA-9033241 BJD13_20555 2d3188839f27e1f1b99aa1d28e791625 404 Pfam PF01266 FAD dependent oxidoreductase 127 402 2.4E-18 T 17-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 BJD13_20555 2d3188839f27e1f1b99aa1d28e791625 404 Gene3D G3DSA:3.40.50.720 127 332 3.5E-27 T 17-10-2018 BJD13_20555 2d3188839f27e1f1b99aa1d28e791625 404 Gene3D G3DSA:3.30.9.10 226 401 3.5E-27 T 17-10-2018 BJD13_03760 82c42eba168a6f1772b9ac4761fb4451 399 SUPERFAMILY SSF55920 165 391 3.01E-67 T 17-10-2018 IPR036005 Creatinase/aminopeptidase-like BJD13_03760 82c42eba168a6f1772b9ac4761fb4451 399 Pfam PF01321 Creatinase/Prolidase N-terminal domain 35 166 8.7E-17 T 17-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 BJD13_03760 82c42eba168a6f1772b9ac4761fb4451 399 Pfam PF00557 Metallopeptidase family M24 174 381 7.8E-49 T 17-10-2018 IPR000994 Peptidase M24 BJD13_03760 82c42eba168a6f1772b9ac4761fb4451 399 SUPERFAMILY SSF53092 16 165 3.66E-25 T 17-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal BJD13_03760 82c42eba168a6f1772b9ac4761fb4451 399 Gene3D G3DSA:3.90.230.10 165 399 5.7E-73 T 17-10-2018 BJD13_03760 82c42eba168a6f1772b9ac4761fb4451 399 Gene3D G3DSA:3.40.350.10 1 164 1.4E-48 T 17-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal BJD13_07985 b42104614287eb100fc6614834136c59 369 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 77 90 - T 17-10-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 BJD13_07985 b42104614287eb100fc6614834136c59 369 SUPERFAMILY SSF55120 5 353 5.04E-89 T 17-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD13_07985 b42104614287eb100fc6614834136c59 369 Gene3D G3DSA:3.30.2350.20 17 352 5.9E-115 T 17-10-2018 BJD13_07985 b42104614287eb100fc6614834136c59 369 Gene3D G3DSA:3.30.2340.10 168 316 5.9E-115 T 17-10-2018 BJD13_07985 b42104614287eb100fc6614834136c59 369 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 18 168 1.3E-37 T 17-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD13_07985 b42104614287eb100fc6614834136c59 369 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 198 351 5.4E-18 T 17-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD13_07985 b42104614287eb100fc6614834136c59 369 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 5 357 29.206 T 17-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD13_22915 1c2f8b1840851517ac1badc7ac0b31a5 490 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 6 475 1.2E-137 T 17-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 BJD13_22915 1c2f8b1840851517ac1badc7ac0b31a5 490 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 6 231 2.3E-21 T 17-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain BJD13_22915 1c2f8b1840851517ac1badc7ac0b31a5 490 SUPERFAMILY SSF52317 253 444 3.64E-38 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD13_22915 1c2f8b1840851517ac1badc7ac0b31a5 490 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 485 207.074 T 17-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 BJD13_22915 1c2f8b1840851517ac1badc7ac0b31a5 490 Gene3D G3DSA:3.40.50.300 4 236 2.1E-53 T 17-10-2018 BJD13_22915 1c2f8b1840851517ac1badc7ac0b31a5 490 SUPERFAMILY SSF52540 1 242 1.48E-56 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_22915 1c2f8b1840851517ac1badc7ac0b31a5 490 Gene3D G3DSA:3.40.50.880 254 378 3.4E-17 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD13_22915 1c2f8b1840851517ac1badc7ac0b31a5 490 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 252 434 4.1E-55 T 17-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 BJD13_03160 4e59d81c4b8a338f6451c11e5f4267ac 744 SUPERFAMILY SSF54862 89 223 2.01E-36 T 17-10-2018 BJD13_03160 4e59d81c4b8a338f6451c11e5f4267ac 744 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 44 61 - T 17-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_03160 4e59d81c4b8a338f6451c11e5f4267ac 744 SUPERFAMILY SSF53706 226 625 7.61E-73 T 17-10-2018 BJD13_03160 4e59d81c4b8a338f6451c11e5f4267ac 744 Pfam PF01568 Molydopterin dinucleotide binding domain 676 730 1.5E-11 T 17-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 BJD13_03160 4e59d81c4b8a338f6451c11e5f4267ac 744 SUPERFAMILY SSF54292 15 87 7.18E-19 T 17-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 BJD13_03160 4e59d81c4b8a338f6451c11e5f4267ac 744 SMART SM00929 96 136 2.5E-19 T 17-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_03160 4e59d81c4b8a338f6451c11e5f4267ac 744 Gene3D G3DSA:3.30.70.20 137 217 9.8E-8 T 17-10-2018 BJD13_03160 4e59d81c4b8a338f6451c11e5f4267ac 744 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 17 607 3.4E-206 T 17-10-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_03160 4e59d81c4b8a338f6451c11e5f4267ac 744 Gene3D G3DSA:2.40.40.20 654 742 1.5E-11 T 17-10-2018 BJD13_03160 4e59d81c4b8a338f6451c11e5f4267ac 744 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 158 168 - T 17-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_03160 4e59d81c4b8a338f6451c11e5f4267ac 744 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 111 123 - T 17-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_03160 4e59d81c4b8a338f6451c11e5f4267ac 744 Gene3D G3DSA:3.10.20.740 14 136 1.1E-40 T 17-10-2018 BJD13_03160 4e59d81c4b8a338f6451c11e5f4267ac 744 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 96 132 6.7E-16 T 17-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_03160 4e59d81c4b8a338f6451c11e5f4267ac 744 Gene3D G3DSA:3.40.50.740 448 633 1.9E-12 T 17-10-2018 BJD13_03160 4e59d81c4b8a338f6451c11e5f4267ac 744 Gene3D G3DSA:3.40.228.10 354 420 9.9E-10 T 17-10-2018 BJD13_03160 4e59d81c4b8a338f6451c11e5f4267ac 744 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 14 89 1.2E-18 T 17-10-2018 BJD13_03160 4e59d81c4b8a338f6451c11e5f4267ac 744 Gene3D G3DSA:3.40.50.740 293 353 9.9E-10 T 17-10-2018 BJD13_03160 4e59d81c4b8a338f6451c11e5f4267ac 744 SUPERFAMILY SSF50692 677 735 1.79E-12 T 17-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily BJD13_03160 4e59d81c4b8a338f6451c11e5f4267ac 744 Pfam PF00384 Molybdopterin oxidoreductase 444 608 3.9E-9 T 17-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_03160 4e59d81c4b8a338f6451c11e5f4267ac 744 Pfam PF00384 Molybdopterin oxidoreductase 285 415 5.9E-17 T 17-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_08450 c3ae189ccf9f5f629d1d16414576860b 320 SUPERFAMILY SSF55681 9 315 2.39E-65 T 17-10-2018 BJD13_08450 c3ae189ccf9f5f629d1d16414576860b 320 Pfam PF00152 tRNA synthetases class II (D, K and N) 9 315 2.5E-34 T 17-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD13_08450 c3ae189ccf9f5f629d1d16414576860b 320 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 11 315 1.4E-109 T 17-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 BJD13_08450 c3ae189ccf9f5f629d1d16414576860b 320 PRINTS PR00982 Lysyl-tRNA synthetase signature 204 220 2.2E-6 T 17-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BJD13_08450 c3ae189ccf9f5f629d1d16414576860b 320 PRINTS PR00982 Lysyl-tRNA synthetase signature 26 36 2.2E-6 T 17-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BJD13_08450 c3ae189ccf9f5f629d1d16414576860b 320 PRINTS PR00982 Lysyl-tRNA synthetase signature 94 111 2.2E-6 T 17-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BJD13_08450 c3ae189ccf9f5f629d1d16414576860b 320 Gene3D G3DSA:3.30.930.10 2 320 4.1E-89 T 17-10-2018 BJD13_00185 41c77e7e4965e360985b8b4135836961 622 Pfam PF00394 Multicopper oxidase 189 367 2.4E-33 T 17-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 BJD13_00185 41c77e7e4965e360985b8b4135836961 622 ProSitePatterns PS00079 Multicopper oxidases signature 1. 154 174 - T 17-10-2018 IPR033138 Multicopper oxidases, conserved site BJD13_00185 41c77e7e4965e360985b8b4135836961 622 ProSitePatterns PS00080 Multicopper oxidases signature 2. 603 614 - T 17-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 BJD13_00185 41c77e7e4965e360985b8b4135836961 622 Pfam PF07731 Multicopper oxidase 507 621 9.2E-28 T 17-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 BJD13_00185 41c77e7e4965e360985b8b4135836961 622 Pfam PF07732 Multicopper oxidase 62 178 6.2E-35 T 17-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 BJD13_00185 41c77e7e4965e360985b8b4135836961 622 Gene3D G3DSA:2.60.40.420 495 621 4.5E-34 T 17-10-2018 IPR008972 Cupredoxin BJD13_00185 41c77e7e4965e360985b8b4135836961 622 Gene3D G3DSA:2.60.40.420 54 181 1.4E-36 T 17-10-2018 IPR008972 Cupredoxin BJD13_00185 41c77e7e4965e360985b8b4135836961 622 SUPERFAMILY SSF49503 469 620 5.65E-37 T 17-10-2018 IPR008972 Cupredoxin BJD13_00185 41c77e7e4965e360985b8b4135836961 622 SUPERFAMILY SSF49503 183 391 9.29E-57 T 17-10-2018 IPR008972 Cupredoxin BJD13_00185 41c77e7e4965e360985b8b4135836961 622 ProSitePatterns PS00079 Multicopper oxidases signature 1. 598 618 - T 17-10-2018 IPR033138 Multicopper oxidases, conserved site BJD13_00185 41c77e7e4965e360985b8b4135836961 622 Gene3D G3DSA:2.60.40.420 184 392 6.9E-40 T 17-10-2018 IPR008972 Cupredoxin BJD13_00185 41c77e7e4965e360985b8b4135836961 622 SUPERFAMILY SSF49503 51 206 1.77E-38 T 17-10-2018 IPR008972 Cupredoxin BJD13_00185 41c77e7e4965e360985b8b4135836961 622 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 17 43 5.2E-6 T 17-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal BJD13_00185 41c77e7e4965e360985b8b4135836961 622 TIGRFAM TIGR01480 copper_res_A: copper-resistance protein, CopA family 17 620 0.0 T 17-10-2018 IPR006376 Copper-resistance protein CopA GO:0005507|GO:0042597 BJD13_03650 258e48bac3ce1201688bd2e40fb0a9db 638 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 10 620 3.3E-256 T 17-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BJD13_03650 258e48bac3ce1201688bd2e40fb0a9db 638 SUPERFAMILY SSF52518 7 384 9.99E-73 T 17-10-2018 IPR029061 Thiamin diphosphate-binding fold BJD13_03650 258e48bac3ce1201688bd2e40fb0a9db 638 SUPERFAMILY SSF52518 320 507 5.3E-55 T 17-10-2018 IPR029061 Thiamin diphosphate-binding fold BJD13_03650 258e48bac3ce1201688bd2e40fb0a9db 638 SUPERFAMILY SSF52922 494 620 2.09E-27 T 17-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BJD13_03650 258e48bac3ce1201688bd2e40fb0a9db 638 SMART SM00861 322 486 6.3E-59 T 17-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BJD13_03650 258e48bac3ce1201688bd2e40fb0a9db 638 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 10 285 2.3E-114 T 17-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BJD13_03650 258e48bac3ce1201688bd2e40fb0a9db 638 Gene3D G3DSA:3.40.50.970 320 492 1.8E-62 T 17-10-2018 BJD13_03650 258e48bac3ce1201688bd2e40fb0a9db 638 Pfam PF02779 Transketolase, pyrimidine binding domain 321 481 5.0E-36 T 17-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BJD13_03650 258e48bac3ce1201688bd2e40fb0a9db 638 Gene3D G3DSA:3.40.50.920 498 622 1.5E-36 T 17-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BJD13_03650 258e48bac3ce1201688bd2e40fb0a9db 638 Pfam PF02780 Transketolase, C-terminal domain 498 614 3.3E-23 T 17-10-2018 IPR033248 Transketolase, C-terminal domain BJD13_03650 258e48bac3ce1201688bd2e40fb0a9db 638 ProSitePatterns PS00802 Transketolase signature 2. 428 444 - T 17-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BJD13_03650 258e48bac3ce1201688bd2e40fb0a9db 638 ProSitePatterns PS00801 Transketolase signature 1. 35 54 - T 17-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BJD13_03650 258e48bac3ce1201688bd2e40fb0a9db 638 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 9 623 45.029 T 17-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BJD13_08665 751156e5e171929b234264ab94369d20 191 SUPERFAMILY SSF55846 23 186 6.15E-34 T 17-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BJD13_08665 751156e5e171929b234264ab94369d20 191 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 28 173 6.2E-22 T 17-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BJD13_08665 751156e5e171929b234264ab94369d20 191 SMART SM00644 20 162 1.1E-18 T 17-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BJD13_08665 751156e5e171929b234264ab94369d20 191 Gene3D G3DSA:3.40.80.10 15 188 5.4E-31 T 17-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BJD13_19405 1ca507ce3990f14bf528bcd9005d0efe 190 Gene3D G3DSA:3.30.70.1290 25 180 9.0E-7 T 17-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 BJD13_19900 5abdea6b16ca7004b099721e53dc6bfa 425 Pfam PF06271 RDD family 223 370 1.0E-20 T 17-10-2018 IPR010432 RDD BJD13_19900 5abdea6b16ca7004b099721e53dc6bfa 425 SUPERFAMILY SSF55277 2 51 4.05E-5 T 17-10-2018 IPR035445 GYF-like domain superfamily BJD13_19900 5abdea6b16ca7004b099721e53dc6bfa 425 Pfam PF14237 Domain of unknown function (DUF4339) 4 48 6.0E-15 T 17-10-2018 IPR025640 Domain of unknown function DUF4339 Reactome: R-HSA-6798695 BJD13_21920 565fc869819f322ee48966d92a3739fd 625 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 138 591 99.931 T 17-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 BJD13_21920 565fc869819f322ee48966d92a3739fd 625 Pfam PF01964 Radical SAM ThiC family 139 586 1.0E-199 T 17-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 BJD13_21920 565fc869819f322ee48966d92a3739fd 625 Gene3D G3DSA:3.20.20.540 209 522 3.0E-153 T 17-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 BJD13_21920 565fc869819f322ee48966d92a3739fd 625 Pfam PF13667 ThiC-associated domain 22 98 4.1E-30 T 17-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 BJD13_21920 565fc869819f322ee48966d92a3739fd 625 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 138 590 9.7E-215 T 17-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 BJD13_19200 0225bc426debf8e907e37fbd9bff498f 197 Pfam PF13628 Domain of unknown function (DUF4142) 56 192 1.7E-14 T 17-10-2018 IPR025419 Domain of unknown function DUF4142 BJD13_20720 1c9b17ca1c17fe3f1634411206dbb45b 191 Pfam PF11454 Protein of unknown function (DUF3016) 42 180 9.5E-52 T 17-10-2018 IPR021557 Protein of unknown function DUF3016 BJD13_21450 5308b97b61433f854bd9669ba045a21e 138 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD13_21450 5308b97b61433f854bd9669ba045a21e 138 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 3.5E-5 T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD13_21450 5308b97b61433f854bd9669ba045a21e 138 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 1.1E-8 T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD13_05600 ca06b7e8c3f9c4407cc0057a98fc3cb3 172 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 24 137 5.1E-5 T 17-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 BJD13_03890 7175e77f2c9830f6cb8e5325e8560bd5 210 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 207 2.2E-80 T 17-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 BJD13_03890 7175e77f2c9830f6cb8e5325e8560bd5 210 SUPERFAMILY SSF53271 4 206 4.46E-63 T 17-10-2018 IPR029057 Phosphoribosyltransferase-like BJD13_03890 7175e77f2c9830f6cb8e5325e8560bd5 210 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 5.2E-63 T 17-10-2018 BJD13_03890 7175e77f2c9830f6cb8e5325e8560bd5 210 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 42.2 T 17-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 BJD13_03890 7175e77f2c9830f6cb8e5325e8560bd5 210 Gene3D G3DSA:3.40.50.2020 1 208 2.8E-68 T 17-10-2018 BJD13_12800 4ccc8ddd54f6fca429ceb406dafef43a 412 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 11 328 3.2E-130 T 17-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 BJD13_12800 4ccc8ddd54f6fca429ceb406dafef43a 412 PRINTS PR00423 Cell division protein FtsZ signature 191 213 3.9E-52 T 17-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 BJD13_12800 4ccc8ddd54f6fca429ceb406dafef43a 412 PRINTS PR00423 Cell division protein FtsZ signature 128 149 3.9E-52 T 17-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 BJD13_12800 4ccc8ddd54f6fca429ceb406dafef43a 412 PRINTS PR00423 Cell division protein FtsZ signature 214 235 3.9E-52 T 17-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 BJD13_12800 4ccc8ddd54f6fca429ceb406dafef43a 412 PRINTS PR00423 Cell division protein FtsZ signature 100 120 3.9E-52 T 17-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 BJD13_12800 4ccc8ddd54f6fca429ceb406dafef43a 412 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 16 174 7.4E-40 T 17-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 BJD13_12800 4ccc8ddd54f6fca429ceb406dafef43a 412 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 11 349 37.68 T 17-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 BJD13_12800 4ccc8ddd54f6fca429ceb406dafef43a 412 Gene3D G3DSA:3.40.50.1440 5 222 1.1E-80 T 17-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 BJD13_12800 4ccc8ddd54f6fca429ceb406dafef43a 412 Pfam PF12327 FtsZ family, C-terminal domain 224 318 2.9E-38 T 17-10-2018 IPR024757 Cell division protein FtsZ, C-terminal BJD13_12800 4ccc8ddd54f6fca429ceb406dafef43a 412 SMART SM00865 209 327 9.3E-57 T 17-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 BJD13_12800 4ccc8ddd54f6fca429ceb406dafef43a 412 Gene3D G3DSA:3.30.1330.20 223 335 5.6E-36 T 17-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 BJD13_12800 4ccc8ddd54f6fca429ceb406dafef43a 412 SMART SM00864 15 207 5.5E-112 T 17-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 BJD13_12800 4ccc8ddd54f6fca429ceb406dafef43a 412 SUPERFAMILY SSF55307 206 321 7.78E-43 T 17-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 BJD13_12800 4ccc8ddd54f6fca429ceb406dafef43a 412 SUPERFAMILY SSF52490 15 210 1.57E-69 T 17-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 BJD13_12800 4ccc8ddd54f6fca429ceb406dafef43a 412 ProSitePatterns PS01135 FtsZ protein signature 2. 99 120 - T 17-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 BJD13_21225 81629d4ec60752acdd3972ab004dd37d 448 Gene3D G3DSA:3.30.310.50 366 448 7.6E-27 T 17-10-2018 BJD13_21225 81629d4ec60752acdd3972ab004dd37d 448 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 151 250 1.1E-21 T 17-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD13_21225 81629d4ec60752acdd3972ab004dd37d 448 SUPERFAMILY SSF53738 4 174 2.35E-34 T 17-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD13_21225 81629d4ec60752acdd3972ab004dd37d 448 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 5 131 2.2E-34 T 17-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD13_21225 81629d4ec60752acdd3972ab004dd37d 448 SUPERFAMILY SSF55957 364 447 5.58E-19 T 17-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD13_21225 81629d4ec60752acdd3972ab004dd37d 448 Gene3D G3DSA:3.40.120.10 1 147 1.9E-57 T 17-10-2018 BJD13_21225 81629d4ec60752acdd3972ab004dd37d 448 SUPERFAMILY SSF53738 255 359 3.92E-31 T 17-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD13_21225 81629d4ec60752acdd3972ab004dd37d 448 SUPERFAMILY SSF53738 151 253 1.14E-27 T 17-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD13_21225 81629d4ec60752acdd3972ab004dd37d 448 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 370 446 1.2E-10 T 17-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD13_21225 81629d4ec60752acdd3972ab004dd37d 448 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 91 100 - T 17-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD13_21225 81629d4ec60752acdd3972ab004dd37d 448 Gene3D G3DSA:3.40.120.10 247 365 4.3E-34 T 17-10-2018 BJD13_21225 81629d4ec60752acdd3972ab004dd37d 448 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 255 365 4.2E-24 T 17-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD13_21225 81629d4ec60752acdd3972ab004dd37d 448 Gene3D G3DSA:3.40.120.10 169 246 1.0E-28 T 17-10-2018 BJD13_21225 81629d4ec60752acdd3972ab004dd37d 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 201 214 2.2E-28 T 17-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD13_21225 81629d4ec60752acdd3972ab004dd37d 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 230 245 2.2E-28 T 17-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD13_21225 81629d4ec60752acdd3972ab004dd37d 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 167 186 2.2E-28 T 17-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD13_21225 81629d4ec60752acdd3972ab004dd37d 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 90 104 2.2E-28 T 17-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BJD13_06575 a0404b18f66736544b42c1d9201e8830 329 PIRSF PIRSF003161 1 329 2.4E-119 T 17-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BJD13_06575 a0404b18f66736544b42c1d9201e8830 329 SUPERFAMILY SSF48029 110 321 1.44E-67 T 17-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical BJD13_06575 a0404b18f66736544b42c1d9201e8830 329 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 1 323 7.5E-103 T 17-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BJD13_06575 a0404b18f66736544b42c1d9201e8830 329 Pfam PF01706 FliG C-terminal domain 215 320 3.6E-39 T 17-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal BJD13_06575 a0404b18f66736544b42c1d9201e8830 329 Gene3D G3DSA:1.10.220.30 1 85 9.7E-22 T 17-10-2018 BJD13_06575 a0404b18f66736544b42c1d9201e8830 329 Pfam PF14841 FliG middle domain 111 184 2.3E-26 T 17-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain BJD13_06575 a0404b18f66736544b42c1d9201e8830 329 PRINTS PR00954 Flagellar motor switch protein FliG signature 268 294 9.1E-66 T 17-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BJD13_06575 a0404b18f66736544b42c1d9201e8830 329 PRINTS PR00954 Flagellar motor switch protein FliG signature 1 17 9.1E-66 T 17-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BJD13_06575 a0404b18f66736544b42c1d9201e8830 329 PRINTS PR00954 Flagellar motor switch protein FliG signature 191 216 9.1E-66 T 17-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BJD13_06575 a0404b18f66736544b42c1d9201e8830 329 PRINTS PR00954 Flagellar motor switch protein FliG signature 110 133 9.1E-66 T 17-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BJD13_06575 a0404b18f66736544b42c1d9201e8830 329 PRINTS PR00954 Flagellar motor switch protein FliG signature 244 264 9.1E-66 T 17-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BJD13_06575 a0404b18f66736544b42c1d9201e8830 329 PRINTS PR00954 Flagellar motor switch protein FliG signature 222 242 9.1E-66 T 17-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BJD13_06575 a0404b18f66736544b42c1d9201e8830 329 PRINTS PR00954 Flagellar motor switch protein FliG signature 30 56 9.1E-66 T 17-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BJD13_06575 a0404b18f66736544b42c1d9201e8830 329 SUPERFAMILY SSF48029 2 113 3.92E-25 T 17-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical BJD13_06575 a0404b18f66736544b42c1d9201e8830 329 Gene3D G3DSA:1.10.220.30 191 329 6.3E-43 T 17-10-2018 BJD13_06575 a0404b18f66736544b42c1d9201e8830 329 Pfam PF14842 FliG N-terminal domain 1 101 4.7E-33 T 17-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain BJD13_06575 a0404b18f66736544b42c1d9201e8830 329 Gene3D G3DSA:1.10.220.30 86 187 1.2E-28 T 17-10-2018 BJD13_17740 779841db9f24f6da9dce549c6bf379d0 213 SUPERFAMILY SSF53639 32 182 1.02E-7 T 17-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily BJD13_17740 779841db9f24f6da9dce549c6bf379d0 213 Gene3D G3DSA:3.40.225.10 6 195 7.1E-9 T 17-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily BJD13_13550 6a36fca0c31aa40c7e0fccb8ad9898e8 132 PIRSF PIRSF016789 7 127 1.4E-31 T 17-10-2018 IPR007401 Protein of unknown function DUF454 BJD13_13550 6a36fca0c31aa40c7e0fccb8ad9898e8 132 Pfam PF04304 Protein of unknown function (DUF454) 8 122 1.6E-35 T 17-10-2018 IPR007401 Protein of unknown function DUF454 BJD13_16870 35b621b287e4cb1085000fa18a635482 509 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 63 371 8.5E-95 T 17-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 BJD13_16870 35b621b287e4cb1085000fa18a635482 509 SUPERFAMILY SSF50156 105 191 2.52E-15 T 17-10-2018 IPR036034 PDZ superfamily GO:0005515 BJD13_16870 35b621b287e4cb1085000fa18a635482 509 Gene3D G3DSA:2.30.42.10 110 195 2.5E-95 T 17-10-2018 BJD13_16870 35b621b287e4cb1085000fa18a635482 509 Gene3D G3DSA:3.90.226.10 196 368 2.5E-95 T 17-10-2018 BJD13_16870 35b621b287e4cb1085000fa18a635482 509 Pfam PF03572 Peptidase family S41 207 368 6.7E-55 T 17-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 BJD13_16870 35b621b287e4cb1085000fa18a635482 509 SMART SM00228 110 179 9.1E-10 T 17-10-2018 IPR001478 PDZ domain GO:0005515 BJD13_16870 35b621b287e4cb1085000fa18a635482 509 Pfam PF13180 PDZ domain 111 188 1.5E-13 T 17-10-2018 IPR001478 PDZ domain GO:0005515 BJD13_16870 35b621b287e4cb1085000fa18a635482 509 SMART SM00245 181 371 1.6E-70 T 17-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 BJD13_16870 35b621b287e4cb1085000fa18a635482 509 SUPERFAMILY SSF52096 50 375 1.09E-74 T 17-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BJD13_16870 35b621b287e4cb1085000fa18a635482 509 Gene3D G3DSA:3.30.750.44 57 346 2.5E-95 T 17-10-2018 BJD13_04005 d60edeadd62463d8991aaf9d1a8cd1b6 318 Pfam PF00294 pfkB family carbohydrate kinase 10 299 2.3E-56 T 17-10-2018 IPR011611 Carbohydrate kinase PfkB BJD13_04005 d60edeadd62463d8991aaf9d1a8cd1b6 318 SUPERFAMILY SSF53613 6 298 1.39E-59 T 17-10-2018 IPR029056 Ribokinase-like BJD13_04005 d60edeadd62463d8991aaf9d1a8cd1b6 318 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 254 267 - T 17-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 BJD13_04005 d60edeadd62463d8991aaf9d1a8cd1b6 318 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 39 63 - T 17-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 BJD13_04005 d60edeadd62463d8991aaf9d1a8cd1b6 318 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 6 315 8.7E-91 T 17-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 BJD13_04005 d60edeadd62463d8991aaf9d1a8cd1b6 318 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 6 315 4.4E-89 T 17-10-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 BJD13_04005 d60edeadd62463d8991aaf9d1a8cd1b6 318 PIRSF PIRSF000535 2 317 5.7E-106 T 17-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 BJD13_04005 d60edeadd62463d8991aaf9d1a8cd1b6 318 Gene3D G3DSA:3.40.1190.20 5 318 1.2E-91 T 17-10-2018 IPR029056 Ribokinase-like BJD13_19915 8ef771e896c2113257a921592d8c5034 381 SUPERFAMILY SSF102405 83 289 2.17E-39 T 17-10-2018 BJD13_19915 8ef771e896c2113257a921592d8c5034 381 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 71 287 3.4E-73 T 17-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 BJD13_19915 8ef771e896c2113257a921592d8c5034 381 Gene3D G3DSA:1.10.10.10 304 377 5.8E-8 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_19915 8ef771e896c2113257a921592d8c5034 381 Gene3D G3DSA:3.40.50.450 3 292 9.9E-94 T 17-10-2018 BJD13_19915 8ef771e896c2113257a921592d8c5034 381 Pfam PF02481 DNA recombination-mediator protein A 73 279 1.3E-73 T 17-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 BJD13_12900 78558d6c4c19c2c9e5809c85ee25a7f5 576 Pfam PF04348 LppC putative lipoprotein 43 567 3.1E-117 T 17-10-2018 IPR007443 Penicillin-binding protein activator LpoA BJD13_12900 78558d6c4c19c2c9e5809c85ee25a7f5 576 Gene3D G3DSA:3.40.50.2300 358 561 4.4E-68 T 17-10-2018 BJD13_12900 78558d6c4c19c2c9e5809c85ee25a7f5 576 Gene3D G3DSA:3.40.50.2300 254 560 4.4E-68 T 17-10-2018 BJD13_12900 78558d6c4c19c2c9e5809c85ee25a7f5 576 SUPERFAMILY SSF53822 250 572 1.74E-62 T 17-10-2018 IPR028082 Periplasmic binding protein-like I BJD13_06315 657812e0b762a9525edae75ee3d43004 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 5.0E-37 T 17-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 BJD13_06315 657812e0b762a9525edae75ee3d43004 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.423 T 17-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 BJD13_06315 657812e0b762a9525edae75ee3d43004 72 Gene3D G3DSA:2.40.50.140 1 72 3.5E-37 T 17-10-2018 BJD13_06315 657812e0b762a9525edae75ee3d43004 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 2.4E-28 T 17-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 BJD13_06315 657812e0b762a9525edae75ee3d43004 72 SMART SM00316 4 72 3.3E-5 T 17-10-2018 IPR022967 RNA-binding domain, S1 BJD13_06315 657812e0b762a9525edae75ee3d43004 72 SUPERFAMILY SSF50249 1 70 4.86E-28 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD13_15155 d3d5e85213db4a0910b657da47744269 499 Gene3D G3DSA:3.30.420.40 1 253 5.6E-111 T 17-10-2018 BJD13_15155 d3d5e85213db4a0910b657da47744269 499 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 362 382 - T 17-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 BJD13_15155 d3d5e85213db4a0910b657da47744269 499 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 261 450 3.5E-62 T 17-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 BJD13_15155 d3d5e85213db4a0910b657da47744269 499 SUPERFAMILY SSF53067 5 255 5.29E-98 T 17-10-2018 BJD13_15155 d3d5e85213db4a0910b657da47744269 499 Hamap MF_00186 Glycerol kinase [glpK]. 3 497 59.509 T 17-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 BJD13_15155 d3d5e85213db4a0910b657da47744269 499 PIRSF PIRSF000538 3 498 2.0E-181 T 17-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 BJD13_15155 d3d5e85213db4a0910b657da47744269 499 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 135 147 - T 17-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 BJD13_15155 d3d5e85213db4a0910b657da47744269 499 Gene3D G3DSA:3.30.420.40 254 498 7.0E-88 T 17-10-2018 BJD13_15155 d3d5e85213db4a0910b657da47744269 499 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 4 495 1.5E-224 T 17-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 BJD13_15155 d3d5e85213db4a0910b657da47744269 499 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 252 1.2E-89 T 17-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 BJD13_15155 d3d5e85213db4a0910b657da47744269 499 SUPERFAMILY SSF53067 255 494 4.26E-84 T 17-10-2018 BJD13_17165 8170e72ec222792bf344965316ad2111 181 Pfam PF02470 MlaD protein 41 119 3.7E-20 T 17-10-2018 IPR003399 Mce/MlaD BJD13_17165 8170e72ec222792bf344965316ad2111 181 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 7 150 1.7E-48 T 17-10-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 BJD13_00945 8f8c2346f4cb99139be221c444eb2b23 272 SUPERFAMILY SSF74653 173 249 1.44E-17 T 17-10-2018 BJD13_00945 8f8c2346f4cb99139be221c444eb2b23 272 Gene3D G3DSA:3.30.1150.10 162 252 7.7E-18 T 17-10-2018 BJD13_00945 8f8c2346f4cb99139be221c444eb2b23 272 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 175 246 4.9E-11 T 17-10-2018 IPR006260 TonB/TolA, C-terminal BJD13_00945 8f8c2346f4cb99139be221c444eb2b23 272 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 174 249 1.6E-16 T 17-10-2018 IPR037682 TonB, C-terminal GO:0055085 BJD13_20290 ce1ff7019b2909a3f26c2d61e277ca88 585 Gene3D G3DSA:1.10.3080.10 20 433 1.8E-66 T 17-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 BJD13_20290 ce1ff7019b2909a3f26c2d61e277ca88 585 SUPERFAMILY SSF54631 448 574 2.95E-10 T 17-10-2018 BJD13_20290 ce1ff7019b2909a3f26c2d61e277ca88 585 PRINTS PR00762 Chloride channel signature 367 383 2.3E-8 T 17-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 BJD13_20290 ce1ff7019b2909a3f26c2d61e277ca88 585 PRINTS PR00762 Chloride channel signature 169 188 2.3E-8 T 17-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 BJD13_20290 ce1ff7019b2909a3f26c2d61e277ca88 585 PRINTS PR00762 Chloride channel signature 118 137 2.3E-8 T 17-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 BJD13_20290 ce1ff7019b2909a3f26c2d61e277ca88 585 PRINTS PR00762 Chloride channel signature 332 352 2.3E-8 T 17-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 BJD13_20290 ce1ff7019b2909a3f26c2d61e277ca88 585 Gene3D G3DSA:3.10.580.10 447 562 2.1E-7 T 17-10-2018 BJD13_20290 ce1ff7019b2909a3f26c2d61e277ca88 585 SUPERFAMILY SSF81340 13 439 1.12E-81 T 17-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 BJD13_20290 ce1ff7019b2909a3f26c2d61e277ca88 585 Pfam PF00654 Voltage gated chloride channel 78 417 1.3E-59 T 17-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 BJD13_19415 538765af4ef484cc74b1c6b0b75f5cc2 240 Pfam PF00535 Glycosyl transferase family 2 7 168 2.8E-24 T 17-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BJD13_19415 538765af4ef484cc74b1c6b0b75f5cc2 240 Gene3D G3DSA:3.90.550.10 1 236 3.8E-34 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD13_19415 538765af4ef484cc74b1c6b0b75f5cc2 240 SUPERFAMILY SSF53448 1 228 3.38E-40 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD13_20440 98d1b0100027ebee148dea94d3219f3a 591 Gene3D G3DSA:3.40.50.300 336 587 1.9E-92 T 17-10-2018 BJD13_20440 98d1b0100027ebee148dea94d3219f3a 591 SUPERFAMILY SSF52540 337 580 3.2E-90 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_20440 98d1b0100027ebee148dea94d3219f3a 591 Pfam PF00005 ABC transporter 361 510 1.0E-33 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD13_20440 98d1b0100027ebee148dea94d3219f3a 591 ProSitePatterns PS00211 ABC transporters family signature. 482 496 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD13_20440 98d1b0100027ebee148dea94d3219f3a 591 SMART SM00382 370 556 2.4E-19 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_20440 98d1b0100027ebee148dea94d3219f3a 591 Gene3D G3DSA:1.20.1560.10 9 334 2.5E-47 T 17-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BJD13_20440 98d1b0100027ebee148dea94d3219f3a 591 SUPERFAMILY SSF90123 16 325 1.14E-47 T 17-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BJD13_20440 98d1b0100027ebee148dea94d3219f3a 591 Pfam PF00664 ABC transporter transmembrane region 33 293 2.4E-18 T 17-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 BJD13_23100 62d886485ab4204827207c23268116ea 177 Gene3D G3DSA:3.40.630.30 2 169 8.2E-45 T 17-10-2018 BJD13_23100 62d886485ab4204827207c23268116ea 177 Pfam PF00583 Acetyltransferase (GNAT) family 35 146 7.8E-14 T 17-10-2018 IPR000182 GNAT domain BJD13_23100 62d886485ab4204827207c23268116ea 177 SUPERFAMILY SSF55729 2 158 1.69E-33 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD13_06335 f527e45555f12666c0cf480817faee7f 378 Gene3D G3DSA:2.40.30.10 278 362 1.1E-28 T 17-10-2018 BJD13_06335 f527e45555f12666c0cf480817faee7f 378 Gene3D G3DSA:2.30.30.280 209 276 4.5E-23 T 17-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 BJD13_06335 f527e45555f12666c0cf480817faee7f 378 Gene3D G3DSA:3.40.50.620 1 207 1.2E-82 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD13_06335 f527e45555f12666c0cf480817faee7f 378 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 5 356 6.0E-125 T 17-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 BJD13_06335 f527e45555f12666c0cf480817faee7f 378 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 4 357 36.698 T 17-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 BJD13_06335 f527e45555f12666c0cf480817faee7f 378 Pfam PF03054 tRNA methyl transferase 5 356 1.8E-125 T 17-10-2018 BJD13_06335 f527e45555f12666c0cf480817faee7f 378 SUPERFAMILY SSF52402 2 291 1.7E-49 T 17-10-2018 BJD13_22505 6b9d118bf3ff3951b3b793bd84fa6642 658 Gene3D G3DSA:3.40.50.300 465 657 7.0E-78 T 17-10-2018 BJD13_22505 6b9d118bf3ff3951b3b793bd84fa6642 658 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 44 487 52.019 T 17-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 BJD13_22505 6b9d118bf3ff3951b3b793bd84fa6642 658 Gene3D G3DSA:2.40.30.10 268 353 1.5E-25 T 17-10-2018 BJD13_22505 6b9d118bf3ff3951b3b793bd84fa6642 658 SUPERFAMILY SSF52540 484 654 9.69E-36 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_22505 6b9d118bf3ff3951b3b793bd84fa6642 658 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 108 123 - T 17-10-2018 IPR031157 Tr-type G domain, conserved site BJD13_22505 6b9d118bf3ff3951b3b793bd84fa6642 658 SUPERFAMILY SSF50447 265 355 5.2E-23 T 17-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BJD13_22505 6b9d118bf3ff3951b3b793bd84fa6642 658 PRINTS PR00315 GTP-binding elongation factor signature 151 162 5.3E-13 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD13_22505 6b9d118bf3ff3951b3b793bd84fa6642 658 PRINTS PR00315 GTP-binding elongation factor signature 54 67 5.3E-13 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD13_22505 6b9d118bf3ff3951b3b793bd84fa6642 658 PRINTS PR00315 GTP-binding elongation factor signature 115 123 5.3E-13 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD13_22505 6b9d118bf3ff3951b3b793bd84fa6642 658 PRINTS PR00315 GTP-binding elongation factor signature 135 145 5.3E-13 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD13_22505 6b9d118bf3ff3951b3b793bd84fa6642 658 PRINTS PR00315 GTP-binding elongation factor signature 188 197 5.3E-13 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD13_22505 6b9d118bf3ff3951b3b793bd84fa6642 658 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 472 654 1.3E-78 T 17-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 BJD13_22505 6b9d118bf3ff3951b3b793bd84fa6642 658 Gene3D G3DSA:2.40.30.10 355 458 3.9E-35 T 17-10-2018 BJD13_22505 6b9d118bf3ff3951b3b793bd84fa6642 658 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 486 658 38.066 T 17-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 BJD13_22505 6b9d118bf3ff3951b3b793bd84fa6642 658 SUPERFAMILY SSF50465 356 457 1.26E-33 T 17-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal BJD13_22505 6b9d118bf3ff3951b3b793bd84fa6642 658 Gene3D G3DSA:3.40.50.300 37 264 9.6E-68 T 17-10-2018 BJD13_22505 6b9d118bf3ff3951b3b793bd84fa6642 658 Pfam PF01583 Adenylylsulphate kinase 488 641 3.2E-71 T 17-10-2018 BJD13_22505 6b9d118bf3ff3951b3b793bd84fa6642 658 Pfam PF00009 Elongation factor Tu GTP binding domain 52 244 9.3E-41 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD13_22505 6b9d118bf3ff3951b3b793bd84fa6642 658 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 53 457 7.7E-209 T 17-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 BJD13_22505 6b9d118bf3ff3951b3b793bd84fa6642 658 SUPERFAMILY SSF52540 45 260 7.14E-56 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_10015 227a4c5c909268189ce39c3c313cd112 206 Gene3D G3DSA:1.10.10.10 126 195 2.0E-21 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_10015 227a4c5c909268189ce39c3c313cd112 206 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 6 194 4.5E-107 T 17-10-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BJD13_10015 227a4c5c909268189ce39c3c313cd112 206 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 25 186 2.7E-30 T 17-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BJD13_10015 227a4c5c909268189ce39c3c313cd112 206 Pfam PF08281 Sigma-70, region 4 134 185 6.1E-18 T 17-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BJD13_10015 227a4c5c909268189ce39c3c313cd112 206 SUPERFAMILY SSF88659 127 186 1.79E-17 T 17-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BJD13_10015 227a4c5c909268189ce39c3c313cd112 206 SUPERFAMILY SSF88946 10 110 1.57E-28 T 17-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BJD13_10015 227a4c5c909268189ce39c3c313cd112 206 Gene3D G3DSA:1.10.1740.10 5 125 3.9E-38 T 17-10-2018 BJD13_10015 227a4c5c909268189ce39c3c313cd112 206 Pfam PF04542 Sigma-70 region 2 29 96 2.6E-16 T 17-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BJD13_11145 30e743aac11618d1a44e773f1c337609 650 SUPERFAMILY SSF54001 277 591 7.99E-64 T 17-10-2018 IPR038765 Papain-like cysteine peptidase superfamily BJD13_11145 30e743aac11618d1a44e773f1c337609 650 Pfam PF11992 Domain of unknown function (DUF3488) 13 326 1.2E-83 T 17-10-2018 IPR021878 Protein of unknown function DUF3488 BJD13_11145 30e743aac11618d1a44e773f1c337609 650 Gene3D G3DSA:3.10.620.30 321 503 1.2E-24 T 17-10-2018 BJD13_11145 30e743aac11618d1a44e773f1c337609 650 SMART SM00460 401 472 1.4E-21 T 17-10-2018 IPR002931 Transglutaminase-like BJD13_11145 30e743aac11618d1a44e773f1c337609 650 Pfam PF01841 Transglutaminase-like superfamily 356 470 5.5E-27 T 17-10-2018 IPR002931 Transglutaminase-like BJD13_12780 1f92c8c10ec785c9340ee59d913e012b 912 SUPERFAMILY SSF52540 6 411 7.75E-87 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_12780 1f92c8c10ec785c9340ee59d913e012b 912 Pfam PF07517 SecA DEAD-like domain 7 398 6.8E-134 T 17-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 BJD13_12780 1f92c8c10ec785c9340ee59d913e012b 912 SUPERFAMILY SSF81886 618 900 5.89E-79 T 17-10-2018 IPR036266 SecA, Wing/Scaffold superfamily BJD13_12780 1f92c8c10ec785c9340ee59d913e012b 912 SUPERFAMILY SSF52540 412 615 1.57E-58 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_12780 1f92c8c10ec785c9340ee59d913e012b 912 Gene3D G3DSA:3.40.50.300 413 617 5.6E-88 T 17-10-2018 BJD13_12780 1f92c8c10ec785c9340ee59d913e012b 912 PRINTS PR00906 SecA protein signature 101 115 1.3E-71 T 17-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BJD13_12780 1f92c8c10ec785c9340ee59d913e012b 912 PRINTS PR00906 SecA protein signature 409 422 1.3E-71 T 17-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BJD13_12780 1f92c8c10ec785c9340ee59d913e012b 912 PRINTS PR00906 SecA protein signature 63 87 1.3E-71 T 17-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BJD13_12780 1f92c8c10ec785c9340ee59d913e012b 912 PRINTS PR00906 SecA protein signature 170 190 1.3E-71 T 17-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BJD13_12780 1f92c8c10ec785c9340ee59d913e012b 912 PRINTS PR00906 SecA protein signature 372 389 1.3E-71 T 17-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BJD13_12780 1f92c8c10ec785c9340ee59d913e012b 912 PRINTS PR00906 SecA protein signature 117 127 1.3E-71 T 17-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BJD13_12780 1f92c8c10ec785c9340ee59d913e012b 912 PRINTS PR00906 SecA protein signature 335 357 1.3E-71 T 17-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BJD13_12780 1f92c8c10ec785c9340ee59d913e012b 912 Gene3D G3DSA:3.40.50.300 22 411 3.1E-178 T 17-10-2018 BJD13_12780 1f92c8c10ec785c9340ee59d913e012b 912 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 815 0.0 T 17-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BJD13_12780 1f92c8c10ec785c9340ee59d913e012b 912 SMART SM00958 228 354 8.7E-75 T 17-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 BJD13_12780 1f92c8c10ec785c9340ee59d913e012b 912 Gene3D G3DSA:3.90.1440.10 229 364 3.1E-178 T 17-10-2018 BJD13_12780 1f92c8c10ec785c9340ee59d913e012b 912 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 829 20.051 T 17-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BJD13_12780 1f92c8c10ec785c9340ee59d913e012b 912 Gene3D G3DSA:1.10.3060.10 618 830 2.8E-70 T 17-10-2018 BJD13_12780 1f92c8c10ec785c9340ee59d913e012b 912 Pfam PF02810 SEC-C motif 892 910 1.1E-10 T 17-10-2018 IPR004027 SEC-C motif BJD13_12780 1f92c8c10ec785c9340ee59d913e012b 912 SMART SM00957 6 398 0.0 T 17-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 BJD13_12780 1f92c8c10ec785c9340ee59d913e012b 912 Pfam PF01043 SecA preprotein cross-linking domain 233 354 1.0E-37 T 17-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 BJD13_12780 1f92c8c10ec785c9340ee59d913e012b 912 ProSitePatterns PS01312 SecA family signature. 496 511 - T 17-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 BJD13_12780 1f92c8c10ec785c9340ee59d913e012b 912 Pfam PF07516 SecA Wing and Scaffold domain 615 826 6.0E-64 T 17-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 BJD13_12780 1f92c8c10ec785c9340ee59d913e012b 912 SUPERFAMILY SSF81767 227 364 2.09E-42 T 17-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 BJD13_23750 42e59380b70aede91169f7453436dbba 1191 Gene3D G3DSA:2.130.10.10 342 639 3.6E-24 T 17-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BJD13_23750 42e59380b70aede91169f7453436dbba 1191 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 922 1036 1.5E-25 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_23750 42e59380b70aede91169f7453436dbba 1191 SUPERFAMILY SSF47384 798 876 1.86E-17 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD13_23750 42e59380b70aede91169f7453436dbba 1191 Pfam PF00512 His Kinase A (phospho-acceptor) domain 810 875 1.5E-15 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_23750 42e59380b70aede91169f7453436dbba 1191 SUPERFAMILY SSF52172 1060 1177 2.56E-28 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_23750 42e59380b70aede91169f7453436dbba 1191 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1022 1035 2.1E-15 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_23750 42e59380b70aede91169f7453436dbba 1191 PRINTS PR00344 Bacterial sensor protein C-terminal signature 962 976 2.1E-15 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_23750 42e59380b70aede91169f7453436dbba 1191 PRINTS PR00344 Bacterial sensor protein C-terminal signature 998 1016 2.1E-15 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_23750 42e59380b70aede91169f7453436dbba 1191 PRINTS PR00344 Bacterial sensor protein C-terminal signature 980 990 2.1E-15 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_23750 42e59380b70aede91169f7453436dbba 1191 Gene3D G3DSA:2.60.40.10 654 765 2.3E-15 T 17-10-2018 IPR013783 Immunoglobulin-like fold BJD13_23750 42e59380b70aede91169f7453436dbba 1191 Gene3D G3DSA:1.10.287.130 780 873 6.9E-23 T 17-10-2018 BJD13_23750 42e59380b70aede91169f7453436dbba 1191 SUPERFAMILY SSF55874 864 1040 3.14E-45 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_23750 42e59380b70aede91169f7453436dbba 1191 Pfam PF07494 Two component regulator propeller 35 57 0.0018 T 17-10-2018 IPR011110 Two component regulator propeller BJD13_23750 42e59380b70aede91169f7453436dbba 1191 Gene3D G3DSA:3.40.50.2300 1052 1184 2.4E-27 T 17-10-2018 BJD13_23750 42e59380b70aede91169f7453436dbba 1191 SUPERFAMILY SSF63829 405 608 1.24E-12 T 17-10-2018 BJD13_23750 42e59380b70aede91169f7453436dbba 1191 SMART SM00448 1061 1172 2.1E-23 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_23750 42e59380b70aede91169f7453436dbba 1191 Gene3D G3DSA:3.30.565.10 874 1039 2.0E-48 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_23750 42e59380b70aede91169f7453436dbba 1191 SUPERFAMILY SSF50998 132 642 9.81E-11 T 17-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily BJD13_23750 42e59380b70aede91169f7453436dbba 1191 Pfam PF00072 Response regulator receiver domain 1064 1172 4.8E-19 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_23750 42e59380b70aede91169f7453436dbba 1191 SMART SM00388 810 875 8.0E-21 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_23750 42e59380b70aede91169f7453436dbba 1191 Pfam PF07495 Y_Y_Y domain 693 755 6.5E-10 T 17-10-2018 IPR011123 Two component regulator three Y BJD13_23750 42e59380b70aede91169f7453436dbba 1191 Gene3D G3DSA:2.130.10.10 26 328 2.1E-38 T 17-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BJD13_23750 42e59380b70aede91169f7453436dbba 1191 SMART SM00387 922 1038 4.2E-32 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_00120 05b11a8a19ea0d7aadede27d69af6cec 97 Gene3D G3DSA:1.10.10.60 14 95 2.9E-10 T 17-10-2018 BJD13_00120 05b11a8a19ea0d7aadede27d69af6cec 97 SUPERFAMILY SSF46689 8 96 8.78E-22 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_00120 05b11a8a19ea0d7aadede27d69af6cec 97 Pfam PF01527 Transposase 11 77 1.0E-15 T 17-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 BJD13_03065 38ccb32b6b67eda593989a9d72f7c659 268 Gene3D G3DSA:3.20.20.70 1 268 1.0E-95 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD13_03065 38ccb32b6b67eda593989a9d72f7c659 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 257 5.9E-70 T 17-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 BJD13_03065 38ccb32b6b67eda593989a9d72f7c659 268 SUPERFAMILY SSF51366 1 244 3.58E-84 T 17-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 BJD13_03065 38ccb32b6b67eda593989a9d72f7c659 268 Pfam PF00290 Tryptophan synthase alpha chain 8 256 1.3E-82 T 17-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 BJD13_03065 38ccb32b6b67eda593989a9d72f7c659 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 17-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 BJD13_03065 38ccb32b6b67eda593989a9d72f7c659 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 264 34.364 T 17-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 BJD13_16015 1a6e752e600312c4084a7eb6d8a3bf98 475 SUPERFAMILY SSF46689 400 468 3.54E-13 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_16015 1a6e752e600312c4084a7eb6d8a3bf98 475 Pfam PF00072 Response regulator receiver domain 10 117 8.2E-26 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_16015 1a6e752e600312c4084a7eb6d8a3bf98 475 Pfam PF00158 Sigma-54 interaction domain 146 312 2.4E-68 T 17-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 BJD13_16015 1a6e752e600312c4084a7eb6d8a3bf98 475 SUPERFAMILY SSF52540 146 389 1.25E-72 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_16015 1a6e752e600312c4084a7eb6d8a3bf98 475 Gene3D G3DSA:1.10.10.60 393 469 3.1E-16 T 17-10-2018 BJD13_16015 1a6e752e600312c4084a7eb6d8a3bf98 475 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 170 183 - T 17-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BJD13_16015 1a6e752e600312c4084a7eb6d8a3bf98 475 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 359 368 - T 17-10-2018 IPR025944 Sigma-54 interaction domain, conserved site BJD13_16015 1a6e752e600312c4084a7eb6d8a3bf98 475 Gene3D G3DSA:3.40.50.2300 5 135 1.6E-33 T 17-10-2018 BJD13_16015 1a6e752e600312c4084a7eb6d8a3bf98 475 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 10 469 5.6E-223 T 17-10-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 BJD13_16015 1a6e752e600312c4084a7eb6d8a3bf98 475 Gene3D G3DSA:3.40.50.300 136 316 5.4E-64 T 17-10-2018 BJD13_16015 1a6e752e600312c4084a7eb6d8a3bf98 475 SMART SM00448 8 120 3.8E-30 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_16015 1a6e752e600312c4084a7eb6d8a3bf98 475 SUPERFAMILY SSF52172 9 190 1.35E-38 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_16015 1a6e752e600312c4084a7eb6d8a3bf98 475 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 232 247 - T 17-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BJD13_16015 1a6e752e600312c4084a7eb6d8a3bf98 475 SMART SM00382 166 309 1.0E-10 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_16015 1a6e752e600312c4084a7eb6d8a3bf98 475 Pfam PF02954 Bacterial regulatory protein, Fis family 431 468 4.4E-9 T 17-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD13_16015 1a6e752e600312c4084a7eb6d8a3bf98 475 Gene3D G3DSA:1.10.8.60 317 392 8.7E-21 T 17-10-2018 BJD13_10295 a56b236e799ee7858a682f861f455c3b 280 Pfam PF01740 STAS domain 165 251 6.4E-8 T 17-10-2018 IPR002645 STAS domain BJD13_10295 a56b236e799ee7858a682f861f455c3b 280 Pfam PF14361 RsbT co-antagonist protein rsbRD N-terminal domain 15 105 1.3E-20 T 17-10-2018 IPR025751 RsbT co-antagonist protein RsbRD, N-terminal domain BJD13_10295 a56b236e799ee7858a682f861f455c3b 280 Gene3D G3DSA:3.30.750.24 154 273 3.9E-35 T 17-10-2018 IPR036513 STAS domain superfamily BJD13_10295 a56b236e799ee7858a682f861f455c3b 280 SUPERFAMILY SSF52091 158 268 1.04E-17 T 17-10-2018 IPR036513 STAS domain superfamily BJD13_05190 b815a529632b15dc81aa35ff3b31edb7 403 SUPERFAMILY SSF51905 30 393 4.27E-34 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_05190 b815a529632b15dc81aa35ff3b31edb7 403 Gene3D G3DSA:3.30.9.10 122 344 4.4E-62 T 17-10-2018 BJD13_05190 b815a529632b15dc81aa35ff3b31edb7 403 Pfam PF01266 FAD dependent oxidoreductase 31 380 4.1E-47 T 17-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 BJD13_05190 b815a529632b15dc81aa35ff3b31edb7 403 Gene3D G3DSA:3.50.50.60 31 383 4.4E-62 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_23845 d8b9b1d5f0db815f5a2f2c3d812ada43 440 Pfam PF16380 Domain of unknown function 364 422 1.1E-9 T 17-10-2018 IPR032153 Domain of unknown function DUF4990 BJD13_23845 d8b9b1d5f0db815f5a2f2c3d812ada43 440 SUPERFAMILY SSF51126 12 438 6.28E-58 T 17-10-2018 IPR011050 Pectin lyase fold/virulence factor BJD13_23845 d8b9b1d5f0db815f5a2f2c3d812ada43 440 Pfam PF13229 Right handed beta helix region 125 308 1.6E-6 T 17-10-2018 IPR039448 Right handed beta helix domain BJD13_23845 d8b9b1d5f0db815f5a2f2c3d812ada43 440 Gene3D G3DSA:2.160.20.10 16 439 3.9E-90 T 17-10-2018 IPR012334 Pectin lyase fold BJD13_00460 d8b9b1d5f0db815f5a2f2c3d812ada43 440 Pfam PF16380 Domain of unknown function 364 422 1.1E-9 T 17-10-2018 IPR032153 Domain of unknown function DUF4990 BJD13_00460 d8b9b1d5f0db815f5a2f2c3d812ada43 440 SUPERFAMILY SSF51126 12 438 6.28E-58 T 17-10-2018 IPR011050 Pectin lyase fold/virulence factor BJD13_00460 d8b9b1d5f0db815f5a2f2c3d812ada43 440 Pfam PF13229 Right handed beta helix region 125 308 1.6E-6 T 17-10-2018 IPR039448 Right handed beta helix domain BJD13_00460 d8b9b1d5f0db815f5a2f2c3d812ada43 440 Gene3D G3DSA:2.160.20.10 16 439 3.9E-90 T 17-10-2018 IPR012334 Pectin lyase fold BJD13_24160 d8b9b1d5f0db815f5a2f2c3d812ada43 440 Pfam PF16380 Domain of unknown function 364 422 1.1E-9 T 17-10-2018 IPR032153 Domain of unknown function DUF4990 BJD13_24160 d8b9b1d5f0db815f5a2f2c3d812ada43 440 SUPERFAMILY SSF51126 12 438 6.28E-58 T 17-10-2018 IPR011050 Pectin lyase fold/virulence factor BJD13_24160 d8b9b1d5f0db815f5a2f2c3d812ada43 440 Pfam PF13229 Right handed beta helix region 125 308 1.6E-6 T 17-10-2018 IPR039448 Right handed beta helix domain BJD13_24160 d8b9b1d5f0db815f5a2f2c3d812ada43 440 Gene3D G3DSA:2.160.20.10 16 439 3.9E-90 T 17-10-2018 IPR012334 Pectin lyase fold BJD13_12435 a001ebd387a7bea6385b1bd4caf9dc8e 402 Pfam PF01494 FAD binding domain 6 339 2.0E-30 T 17-10-2018 IPR002938 FAD-binding domain GO:0071949 BJD13_12435 a001ebd387a7bea6385b1bd4caf9dc8e 402 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 389 1.9E-108 T 17-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 BJD13_12435 a001ebd387a7bea6385b1bd4caf9dc8e 402 SUPERFAMILY SSF51905 5 380 2.8E-49 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_12435 a001ebd387a7bea6385b1bd4caf9dc8e 402 Gene3D G3DSA:3.50.50.60 6 337 1.3E-81 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_12435 a001ebd387a7bea6385b1bd4caf9dc8e 402 Gene3D G3DSA:3.30.9.50 78 271 1.3E-81 T 17-10-2018 BJD13_12435 a001ebd387a7bea6385b1bd4caf9dc8e 402 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 6 389 5.9E-134 T 17-10-2018 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 BJD13_12435 a001ebd387a7bea6385b1bd4caf9dc8e 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 282 297 2.2E-20 T 17-10-2018 BJD13_12435 a001ebd387a7bea6385b1bd4caf9dc8e 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 158 173 2.2E-20 T 17-10-2018 BJD13_12435 a001ebd387a7bea6385b1bd4caf9dc8e 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 313 2.2E-20 T 17-10-2018 BJD13_12435 a001ebd387a7bea6385b1bd4caf9dc8e 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 2.2E-20 T 17-10-2018 BJD13_19025 65aac01da961a02b7fd65080a9f9116a 50 Pfam PF08085 Entericidin EcnA/B family 22 42 1.1E-7 T 17-10-2018 IPR012556 Entericidin A/B GO:0009636|GO:0016020 BJD13_12350 fa45fda7912665aa0197c86cfc30fd63 347 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 347 78.178 T 17-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 BJD13_12350 fa45fda7912665aa0197c86cfc30fd63 347 Pfam PF01728 FtsJ-like methyltransferase 182 273 3.1E-7 T 17-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 BJD13_12350 fa45fda7912665aa0197c86cfc30fd63 347 PIRSF PIRSF028774 1 347 1.6E-162 T 17-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 BJD13_12350 fa45fda7912665aa0197c86cfc30fd63 347 Gene3D G3DSA:3.30.70.2810 1 76 2.9E-25 T 17-10-2018 BJD13_12350 fa45fda7912665aa0197c86cfc30fd63 347 Gene3D G3DSA:3.30.2300.20 77 171 1.4E-29 T 17-10-2018 BJD13_12350 fa45fda7912665aa0197c86cfc30fd63 347 SUPERFAMILY SSF53335 181 291 1.19E-15 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_12350 fa45fda7912665aa0197c86cfc30fd63 347 Gene3D G3DSA:3.40.50.150 172 347 4.1E-52 T 17-10-2018 BJD13_07705 43265a01b112da9290a882868ec8891f 497 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 258 441 2.2E-31 T 17-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 BJD13_07705 43265a01b112da9290a882868ec8891f 497 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 3 248 1.1E-55 T 17-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 BJD13_07705 43265a01b112da9290a882868ec8891f 497 SUPERFAMILY SSF53067 1 248 2.24E-55 T 17-10-2018 BJD13_07705 43265a01b112da9290a882868ec8891f 497 Gene3D G3DSA:3.30.420.40 1 249 1.4E-68 T 17-10-2018 BJD13_07705 43265a01b112da9290a882868ec8891f 497 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 352 373 - T 17-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 BJD13_07705 43265a01b112da9290a882868ec8891f 497 SUPERFAMILY SSF53067 252 494 5.87E-54 T 17-10-2018 BJD13_07705 43265a01b112da9290a882868ec8891f 497 Gene3D G3DSA:3.30.420.40 252 490 1.2E-68 T 17-10-2018 BJD13_07705 43265a01b112da9290a882868ec8891f 497 TIGRFAM TIGR01312 XylB: xylulokinase 5 487 2.3E-158 T 17-10-2018 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 BJD13_07705 43265a01b112da9290a882868ec8891f 497 PIRSF PIRSF000538 1 497 1.2E-111 T 17-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 BJD13_20650 843704b2732b870dac602dab400a4f90 314 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD13_20650 843704b2732b870dac602dab400a4f90 314 SMART SM00382 30 226 2.3E-17 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_20650 843704b2732b870dac602dab400a4f90 314 SUPERFAMILY SSF52540 4 227 2.28E-64 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_20650 843704b2732b870dac602dab400a4f90 314 Gene3D G3DSA:3.40.50.300 1 236 6.7E-66 T 17-10-2018 BJD13_20650 843704b2732b870dac602dab400a4f90 314 Pfam PF00005 ABC transporter 21 163 7.0E-34 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD13_18045 aebac598c7de3d6dc150fd2b092184d9 433 TIGRFAM TIGR00885 fucP: L-fucose:H+ symporter permease 19 422 6.3E-136 T 17-10-2018 IPR005275 L-fucose permease FucP GO:0015150|GO:0015756 BJD13_18045 aebac598c7de3d6dc150fd2b092184d9 433 Pfam PF07690 Major Facilitator Superfamily 28 384 7.1E-21 T 17-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD13_18045 aebac598c7de3d6dc150fd2b092184d9 433 Gene3D G3DSA:1.20.1250.20 238 427 7.8E-54 T 17-10-2018 BJD13_18045 aebac598c7de3d6dc150fd2b092184d9 433 SUPERFAMILY SSF103473 11 425 3.92E-41 T 17-10-2018 IPR036259 MFS transporter superfamily BJD13_18045 aebac598c7de3d6dc150fd2b092184d9 433 Gene3D G3DSA:1.20.1250.20 17 232 9.9E-61 T 17-10-2018 BJD13_08365 f95b17029b913ac905ffeaa1a161224d 269 SUPERFAMILY SSF49879 115 217 2.49E-17 T 17-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 BJD13_08365 f95b17029b913ac905ffeaa1a161224d 269 Gene3D G3DSA:2.60.200.20 95 215 7.8E-19 T 17-10-2018 BJD13_08365 f95b17029b913ac905ffeaa1a161224d 269 SMART SM00240 137 187 5.5E-6 T 17-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 BJD13_08365 f95b17029b913ac905ffeaa1a161224d 269 Pfam PF16697 Inner membrane component of T3SS, cytoplasmic domain 123 198 3.0E-16 T 17-10-2018 IPR032030 YscD, cytoplasmic domain BJD13_04455 113664451331ef7df07dd21c4ca9e1c8 291 Gene3D G3DSA:3.40.50.1820 31 280 2.0E-58 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_04455 113664451331ef7df07dd21c4ca9e1c8 291 Pfam PF00135 Carboxylesterase family 49 157 1.0E-13 T 17-10-2018 IPR002018 Carboxylesterase, type B BJD13_04455 113664451331ef7df07dd21c4ca9e1c8 291 SUPERFAMILY SSF53474 37 288 4.3E-49 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_18940 ec68bab5fccb80082b0ae92326a1fccc 471 SMART SM00387 358 471 7.0E-26 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_18940 ec68bab5fccb80082b0ae92326a1fccc 471 Gene3D G3DSA:1.10.287.130 203 307 9.9E-11 T 17-10-2018 BJD13_18940 ec68bab5fccb80082b0ae92326a1fccc 471 SMART SM00388 256 313 0.0079 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_18940 ec68bab5fccb80082b0ae92326a1fccc 471 Gene3D G3DSA:3.30.565.10 317 469 6.8E-28 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_18940 ec68bab5fccb80082b0ae92326a1fccc 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 413 2.8E-11 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_18940 ec68bab5fccb80082b0ae92326a1fccc 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 455 468 2.8E-11 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_18940 ec68bab5fccb80082b0ae92326a1fccc 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 430 448 2.8E-11 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_18940 ec68bab5fccb80082b0ae92326a1fccc 471 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 359 469 5.5E-13 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_18940 ec68bab5fccb80082b0ae92326a1fccc 471 SUPERFAMILY SSF55874 306 468 2.23E-24 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_18940 ec68bab5fccb80082b0ae92326a1fccc 471 SUPERFAMILY SSF47384 239 304 1.47E-5 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD13_12150 379487fc4fd18a589f1c6767eaffb16e 577 SUPERFAMILY SSF89260 478 566 3.79E-5 T 17-10-2018 BJD13_12150 379487fc4fd18a589f1c6767eaffb16e 577 PRINTS PR00723 Subtilisin serine protease family (S8) signature 402 418 5.5E-17 T 17-10-2018 IPR015500 Peptidase S8, subtilisin-related BJD13_12150 379487fc4fd18a589f1c6767eaffb16e 577 PRINTS PR00723 Subtilisin serine protease family (S8) signature 168 187 5.5E-17 T 17-10-2018 IPR015500 Peptidase S8, subtilisin-related BJD13_12150 379487fc4fd18a589f1c6767eaffb16e 577 PRINTS PR00723 Subtilisin serine protease family (S8) signature 229 242 5.5E-17 T 17-10-2018 IPR015500 Peptidase S8, subtilisin-related BJD13_12150 379487fc4fd18a589f1c6767eaffb16e 577 SUPERFAMILY SSF52743 116 464 1.57E-74 T 17-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BJD13_12150 379487fc4fd18a589f1c6767eaffb16e 577 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 233 243 - T 17-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site BJD13_12150 379487fc4fd18a589f1c6767eaffb16e 577 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 403 413 - T 17-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site BJD13_12150 379487fc4fd18a589f1c6767eaffb16e 577 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 499 563 1.6E-12 T 17-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial BJD13_12150 379487fc4fd18a589f1c6767eaffb16e 577 Pfam PF00082 Subtilase family 168 453 1.3E-52 T 17-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 BJD13_12150 379487fc4fd18a589f1c6767eaffb16e 577 Gene3D G3DSA:2.60.120.380 477 577 6.2E-37 T 17-10-2018 BJD13_12150 379487fc4fd18a589f1c6767eaffb16e 577 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 173 183 - T 17-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site BJD13_12150 379487fc4fd18a589f1c6767eaffb16e 577 Gene3D G3DSA:3.40.50.200 137 469 6.2E-104 T 17-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BJD13_09910 1baa694066a47a26d26c1201c0508e26 216 SUPERFAMILY SSF56300 28 158 7.6E-14 T 17-10-2018 BJD13_09910 1baa694066a47a26d26c1201c0508e26 216 PIRSF PIRSF000887 7 210 2.7E-51 T 17-10-2018 IPR024173 Phosphoesterase, MJ0037 BJD13_09910 1baa694066a47a26d26c1201c0508e26 216 TIGRFAM TIGR04123 P_estr_lig_assc: metallophosphoesterase, DNA ligase-associated 8 207 1.3E-55 T 17-10-2018 IPR026336 Metallophosphoesterase, DNA ligase-associated BJD13_09910 1baa694066a47a26d26c1201c0508e26 216 Gene3D G3DSA:3.60.21.10 30 166 2.6E-10 T 17-10-2018 IPR029052 Metallo-dependent phosphatase-like BJD13_09910 1baa694066a47a26d26c1201c0508e26 216 Pfam PF00149 Calcineurin-like phosphoesterase 29 130 1.4E-7 T 17-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 BJD13_01035 57cbb0a6ec8541cd27d8ac0d50308435 156 SUPERFAMILY SSF53041 11 156 1.31E-24 T 17-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 BJD13_01035 57cbb0a6ec8541cd27d8ac0d50308435 156 ProSitePatterns PS00397 Site-specific recombinases active site. 16 24 - T 17-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 BJD13_01035 57cbb0a6ec8541cd27d8ac0d50308435 156 ProSitePatterns PS00398 Site-specific recombinases signature 2. 71 83 - T 17-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 BJD13_01035 57cbb0a6ec8541cd27d8ac0d50308435 156 Pfam PF00239 Resolvase, N terminal domain 14 156 1.3E-20 T 17-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 BJD13_01035 57cbb0a6ec8541cd27d8ac0d50308435 156 Gene3D G3DSA:3.40.50.1390 14 156 6.5E-25 T 17-10-2018 BJD13_01035 57cbb0a6ec8541cd27d8ac0d50308435 156 SMART SM00857 13 156 7.5E-23 T 17-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 BJD13_00490 a66dd00e39f57196e40811a71091083b 526 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 259 332 1.4E-10 T 17-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BJD13_00490 a66dd00e39f57196e40811a71091083b 526 Gene3D G3DSA:3.40.50.300 174 361 7.2E-9 T 17-10-2018 BJD13_00490 a66dd00e39f57196e40811a71091083b 526 Pfam PF13476 AAA domain 5 54 6.5E-12 T 17-10-2018 IPR038729 Rad50/SbcC-type AAA domain BJD13_00490 a66dd00e39f57196e40811a71091083b 526 SUPERFAMILY SSF52540 1 348 6.0E-23 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_00490 a66dd00e39f57196e40811a71091083b 526 Gene3D G3DSA:3.40.50.300 1 147 4.9E-15 T 17-10-2018 BJD13_17190 6b17970ab47b7e2415dce48fd1cf138f 178 SUPERFAMILY SSF88874 1 172 6.67E-40 T 17-10-2018 BJD13_17190 6b17970ab47b7e2415dce48fd1cf138f 178 Gene3D G3DSA:3.90.1340.10 2 58 1.9E-11 T 17-10-2018 IPR037053 Phage tail collar domain superfamily BJD13_17190 6b17970ab47b7e2415dce48fd1cf138f 178 Pfam PF07484 Phage Tail Collar Domain 7 62 8.3E-21 T 17-10-2018 IPR011083 Phage tail collar domain BJD13_06795 f7b59b62a638bbd11826dfd33b3a27e0 424 Pfam PF01584 CheW-like domain 291 423 2.9E-30 T 17-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BJD13_06795 f7b59b62a638bbd11826dfd33b3a27e0 424 SUPERFAMILY SSF50341 287 424 7.19E-31 T 17-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 BJD13_06795 f7b59b62a638bbd11826dfd33b3a27e0 424 SMART SM00260 285 423 9.6E-23 T 17-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BJD13_06795 f7b59b62a638bbd11826dfd33b3a27e0 424 Gene3D G3DSA:2.30.30.40 294 417 6.8E-30 T 17-10-2018 BJD13_06795 f7b59b62a638bbd11826dfd33b3a27e0 424 Gene3D G3DSA:2.40.50.180 308 418 6.8E-30 T 17-10-2018 BJD13_05510 113d32af85398f5b12636fb70ab35b74 215 Pfam PF00072 Response regulator receiver domain 5 116 8.9E-25 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_05510 113d32af85398f5b12636fb70ab35b74 215 SUPERFAMILY SSF52172 2 132 1.1E-29 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_05510 113d32af85398f5b12636fb70ab35b74 215 SMART SM00421 146 203 1.9E-17 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_05510 113d32af85398f5b12636fb70ab35b74 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 203 3.0E-15 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_05510 113d32af85398f5b12636fb70ab35b74 215 SMART SM00448 3 116 1.2E-26 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_05510 113d32af85398f5b12636fb70ab35b74 215 Gene3D G3DSA:3.40.50.12740 3 209 1.2E-54 T 17-10-2018 BJD13_05510 113d32af85398f5b12636fb70ab35b74 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 4.4E-11 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_05510 113d32af85398f5b12636fb70ab35b74 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 4.4E-11 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_05510 113d32af85398f5b12636fb70ab35b74 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 4.4E-11 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_05510 113d32af85398f5b12636fb70ab35b74 215 SUPERFAMILY SSF46894 144 210 4.76E-18 T 17-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BJD13_23460 f30f29add4b9cb4ba874a68a733b4eca 190 Gene3D G3DSA:1.10.1740.10 8 96 2.8E-13 T 17-10-2018 BJD13_23460 f30f29add4b9cb4ba874a68a733b4eca 190 SUPERFAMILY SSF88659 112 187 2.18E-14 T 17-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BJD13_23460 f30f29add4b9cb4ba874a68a733b4eca 190 Gene3D G3DSA:1.10.10.10 97 189 5.1E-17 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_23460 f30f29add4b9cb4ba874a68a733b4eca 190 Pfam PF04545 Sigma-70, region 4 135 183 7.0E-12 T 17-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 BJD13_23460 f30f29add4b9cb4ba874a68a733b4eca 190 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 28 185 6.1E-25 T 17-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BJD13_23460 f30f29add4b9cb4ba874a68a733b4eca 190 Pfam PF04542 Sigma-70 region 2 30 96 1.1E-12 T 17-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BJD13_23460 f30f29add4b9cb4ba874a68a733b4eca 190 SUPERFAMILY SSF88946 6 112 1.53E-16 T 17-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BJD13_09930 4b65b6cf2d3968128a20a87a750be17c 184 Pfam PF00156 Phosphoribosyl transferase domain 15 170 1.5E-21 T 17-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 BJD13_09930 4b65b6cf2d3968128a20a87a750be17c 184 SUPERFAMILY SSF53271 6 183 5.24E-45 T 17-10-2018 IPR029057 Phosphoribosyltransferase-like BJD13_09930 4b65b6cf2d3968128a20a87a750be17c 184 Gene3D G3DSA:3.40.50.2020 4 184 1.7E-47 T 17-10-2018 BJD13_10325 5f5e5cf48d67d3f15ff7ff4485d75b89 463 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 458 1.8E-192 T 17-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 BJD13_10325 5f5e5cf48d67d3f15ff7ff4485d75b89 463 SUPERFAMILY SSF52540 74 297 3.59E-46 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_10325 5f5e5cf48d67d3f15ff7ff4485d75b89 463 SMART SM00382 97 250 7.4E-9 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_10325 5f5e5cf48d67d3f15ff7ff4485d75b89 463 Gene3D G3DSA:3.40.50.300 68 291 1.0E-39 T 17-10-2018 BJD13_10325 5f5e5cf48d67d3f15ff7ff4485d75b89 463 Gene3D G3DSA:3.30.230.10 330 463 8.0E-14 T 17-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BJD13_10325 5f5e5cf48d67d3f15ff7ff4485d75b89 463 Pfam PF13541 Subunit ChlI of Mg-chelatase 353 436 3.2E-10 T 17-10-2018 BJD13_10325 5f5e5cf48d67d3f15ff7ff4485d75b89 463 Hamap MF_01498 DNA repair protein RadA [radA]. 21 462 43.512 T 17-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 BJD13_10325 5f5e5cf48d67d3f15ff7ff4485d75b89 463 Pfam PF13481 AAA domain 91 228 1.3E-12 T 17-10-2018 BJD13_10325 5f5e5cf48d67d3f15ff7ff4485d75b89 463 PRINTS PR01874 DNA repair protein radA signature 89 117 3.5E-92 T 17-10-2018 BJD13_10325 5f5e5cf48d67d3f15ff7ff4485d75b89 463 PRINTS PR01874 DNA repair protein radA signature 180 204 3.5E-92 T 17-10-2018 BJD13_10325 5f5e5cf48d67d3f15ff7ff4485d75b89 463 PRINTS PR01874 DNA repair protein radA signature 10 34 3.5E-92 T 17-10-2018 BJD13_10325 5f5e5cf48d67d3f15ff7ff4485d75b89 463 PRINTS PR01874 DNA repair protein radA signature 219 247 3.5E-92 T 17-10-2018 BJD13_10325 5f5e5cf48d67d3f15ff7ff4485d75b89 463 PRINTS PR01874 DNA repair protein radA signature 328 351 3.5E-92 T 17-10-2018 BJD13_10325 5f5e5cf48d67d3f15ff7ff4485d75b89 463 PRINTS PR01874 DNA repair protein radA signature 130 147 3.5E-92 T 17-10-2018 BJD13_10325 5f5e5cf48d67d3f15ff7ff4485d75b89 463 PRINTS PR01874 DNA repair protein radA signature 254 280 3.5E-92 T 17-10-2018 BJD13_10325 5f5e5cf48d67d3f15ff7ff4485d75b89 463 SUPERFAMILY SSF54211 261 461 4.93E-42 T 17-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BJD13_10750 fbfae84de3e1868583ecc1257b1151d4 114 Gene3D G3DSA:2.60.120.10 10 113 3.2E-31 T 17-10-2018 IPR014710 RmlC-like jelly roll fold BJD13_10750 fbfae84de3e1868583ecc1257b1151d4 114 SUPERFAMILY SSF51182 19 108 3.16E-21 T 17-10-2018 IPR011051 RmlC-like cupin domain superfamily BJD13_10750 fbfae84de3e1868583ecc1257b1151d4 114 Pfam PF07883 Cupin domain 26 94 2.1E-17 T 17-10-2018 IPR013096 Cupin 2, conserved barrel BJD13_08370 475b7aeb86198f7579adcab96923634f 91 TIGRFAM TIGR02610 PHA_gran_rgn: putative polyhydroxyalkanoic acid system protein 1 91 6.8E-44 T 17-10-2018 IPR013433 Putative polyhydroxyalkanoic acid system protein BJD13_08370 475b7aeb86198f7579adcab96923634f 91 Pfam PF09650 Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn) 4 90 4.5E-29 T 17-10-2018 IPR013433 Putative polyhydroxyalkanoic acid system protein BJD13_22880 f054831fb8785689afe179d4936cf92f 861 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 17-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 BJD13_22880 f054831fb8785689afe179d4936cf92f 861 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 1.2E-42 T 17-10-2018 IPR001270 ClpA/B family GO:0005524 BJD13_22880 f054831fb8785689afe179d4936cf92f 861 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 1.2E-42 T 17-10-2018 IPR001270 ClpA/B family GO:0005524 BJD13_22880 f054831fb8785689afe179d4936cf92f 861 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 1.2E-42 T 17-10-2018 IPR001270 ClpA/B family GO:0005524 BJD13_22880 f054831fb8785689afe179d4936cf92f 861 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 1.2E-42 T 17-10-2018 IPR001270 ClpA/B family GO:0005524 BJD13_22880 f054831fb8785689afe179d4936cf92f 861 SMART SM01086 769 858 3.8E-38 T 17-10-2018 IPR019489 Clp ATPase, C-terminal BJD13_22880 f054831fb8785689afe179d4936cf92f 861 Gene3D G3DSA:1.10.8.60 769 861 6.6E-28 T 17-10-2018 BJD13_22880 f054831fb8785689afe179d4936cf92f 861 Gene3D G3DSA:1.10.1780.10 1 147 8.8E-32 T 17-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 BJD13_22880 f054831fb8785689afe179d4936cf92f 861 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 17-10-2018 IPR028299 ClpA/B, conserved site 2 BJD13_22880 f054831fb8785689afe179d4936cf92f 861 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 336 9.1E-13 T 17-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BJD13_22880 f054831fb8785689afe179d4936cf92f 861 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 858 0.0 T 17-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 BJD13_22880 f054831fb8785689afe179d4936cf92f 861 Gene3D G3DSA:3.40.50.300 343 544 1.4E-69 T 17-10-2018 BJD13_22880 f054831fb8785689afe179d4936cf92f 861 Gene3D G3DSA:3.40.50.300 148 342 2.5E-73 T 17-10-2018 BJD13_22880 f054831fb8785689afe179d4936cf92f 861 Gene3D G3DSA:3.40.50.300 550 767 3.3E-87 T 17-10-2018 BJD13_22880 f054831fb8785689afe179d4936cf92f 861 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 763 1.6E-55 T 17-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BJD13_22880 f054831fb8785689afe179d4936cf92f 861 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 769 849 3.3E-26 T 17-10-2018 IPR019489 Clp ATPase, C-terminal BJD13_22880 f054831fb8785689afe179d4936cf92f 861 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 5.9E-12 T 17-10-2018 IPR004176 Clp, N-terminal BJD13_22880 f054831fb8785689afe179d4936cf92f 861 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 95 145 4.4E-8 T 17-10-2018 IPR004176 Clp, N-terminal BJD13_22880 f054831fb8785689afe179d4936cf92f 861 SUPERFAMILY SSF81923 4 156 5.3E-40 T 17-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 BJD13_22880 f054831fb8785689afe179d4936cf92f 861 SMART SM00382 597 770 1.2E-10 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_22880 f054831fb8785689afe179d4936cf92f 861 SMART SM00382 198 344 8.0E-10 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_22880 f054831fb8785689afe179d4936cf92f 861 SUPERFAMILY SSF52540 546 858 2.2E-82 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_22880 f054831fb8785689afe179d4936cf92f 861 SUPERFAMILY SSF52540 159 545 1.52E-99 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_23210 acd2b8d4e6236f0e37eec4bd0a964df2 119 SMART SM00448 3 110 1.8E-14 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_23210 acd2b8d4e6236f0e37eec4bd0a964df2 119 SUPERFAMILY SSF52172 3 115 7.26E-22 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_23210 acd2b8d4e6236f0e37eec4bd0a964df2 119 Pfam PF00072 Response regulator receiver domain 5 110 1.3E-13 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_23210 acd2b8d4e6236f0e37eec4bd0a964df2 119 Gene3D G3DSA:3.40.50.2300 1 119 7.8E-40 T 17-10-2018 BJD13_21805 8e989bbeffe92f61dcded5425f42beed 65 Pfam PF10276 Zinc-finger domain 25 61 3.2E-8 T 17-10-2018 IPR019401 Zinc finger, CHCC-type Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_21805 8e989bbeffe92f61dcded5425f42beed 65 Gene3D G3DSA:2.60.260.40 10 63 2.5E-10 T 17-10-2018 BJD13_03005 f4630a36d7ff799ff4563c3f3b0f9f6f 308 PIRSF PIRSF037167 1 303 4.6E-124 T 17-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 BJD13_03005 f4630a36d7ff799ff4563c3f3b0f9f6f 308 Pfam PF05175 Methyltransferase small domain 131 213 5.9E-15 T 17-10-2018 IPR007848 Methyltransferase small domain GO:0008168 BJD13_03005 f4630a36d7ff799ff4563c3f3b0f9f6f 308 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 11 286 1.2E-69 T 17-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 BJD13_03005 f4630a36d7ff799ff4563c3f3b0f9f6f 308 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 200 206 - T 17-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 BJD13_03005 f4630a36d7ff799ff4563c3f3b0f9f6f 308 Gene3D G3DSA:1.10.8.10 12 101 9.7E-8 T 17-10-2018 BJD13_03005 f4630a36d7ff799ff4563c3f3b0f9f6f 308 SUPERFAMILY SSF53335 12 289 1.22E-47 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_03005 f4630a36d7ff799ff4563c3f3b0f9f6f 308 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 9 290 1.2E-116 T 17-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 BJD13_03005 f4630a36d7ff799ff4563c3f3b0f9f6f 308 Gene3D G3DSA:3.40.50.150 105 283 1.5E-43 T 17-10-2018 BJD13_03005 f4630a36d7ff799ff4563c3f3b0f9f6f 308 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 2 296 48.859 T 17-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 BJD13_18420 8d999b28cf548dad10acdaa8cd211735 655 Pfam PF05954 Phage late control gene D protein (GPD) 24 329 1.5E-79 T 17-10-2018 BJD13_18420 8d999b28cf548dad10acdaa8cd211735 655 SUPERFAMILY SSF69349 440 655 2.12E-37 T 17-10-2018 BJD13_18420 8d999b28cf548dad10acdaa8cd211735 655 Gene3D G3DSA:3.55.50.10 96 187 5.4E-95 T 17-10-2018 BJD13_18420 8d999b28cf548dad10acdaa8cd211735 655 Gene3D G3DSA:3.30.1920.30 224 288 5.4E-95 T 17-10-2018 BJD13_18420 8d999b28cf548dad10acdaa8cd211735 655 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 17 503 1.7E-128 T 17-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein BJD13_18420 8d999b28cf548dad10acdaa8cd211735 655 SUPERFAMILY SSF69279 193 360 2.21E-21 T 17-10-2018 BJD13_18420 8d999b28cf548dad10acdaa8cd211735 655 SUPERFAMILY SSF69255 363 450 1.07E-29 T 17-10-2018 BJD13_18420 8d999b28cf548dad10acdaa8cd211735 655 Gene3D G3DSA:2.30.110.50 9 329 5.4E-95 T 17-10-2018 BJD13_18420 8d999b28cf548dad10acdaa8cd211735 655 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 8 520 7.7E-180 T 17-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset BJD13_18420 8d999b28cf548dad10acdaa8cd211735 655 Gene3D G3DSA:2.40.50.230 353 455 2.3E-40 T 17-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily BJD13_18420 8d999b28cf548dad10acdaa8cd211735 655 SUPERFAMILY SSF69279 8 182 3.12E-49 T 17-10-2018 BJD13_20630 1be81603e9cda1741c257ae3a954ab7e 478 SUPERFAMILY SSF52141 278 454 1.08E-53 T 17-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BJD13_20630 1be81603e9cda1741c257ae3a954ab7e 478 SMART SM00986 304 464 2.7E-36 T 17-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BJD13_20630 1be81603e9cda1741c257ae3a954ab7e 478 Pfam PF13566 Domain of unknown function (DUF4130 77 235 3.3E-43 T 17-10-2018 IPR025404 Domain of unknown function DUF4130 BJD13_20630 1be81603e9cda1741c257ae3a954ab7e 478 Gene3D G3DSA:3.40.470.10 273 468 9.2E-60 T 17-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BJD13_20630 1be81603e9cda1741c257ae3a954ab7e 478 TIGRFAM TIGR03915 SAM_7_link_chp: probable DNA metabolism protein 10 236 1.9E-66 T 17-10-2018 IPR023875 DNA metabolism protein, putative BJD13_20630 1be81603e9cda1741c257ae3a954ab7e 478 Pfam PF03167 Uracil DNA glycosylase superfamily 304 453 7.2E-37 T 17-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BJD13_20630 1be81603e9cda1741c257ae3a954ab7e 478 TIGRFAM TIGR03914 UDG_fam_dom: uracil-DNA glycosylase family domain 238 465 2.1E-97 T 17-10-2018 IPR005273 Uracil-DNA glycosylase family 4 BJD13_20630 1be81603e9cda1741c257ae3a954ab7e 478 SMART SM00987 304 464 2.7E-36 T 17-10-2018 BJD13_20630 1be81603e9cda1741c257ae3a954ab7e 478 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 290 451 1.5E-39 T 17-10-2018 IPR005273 Uracil-DNA glycosylase family 4 BJD13_09390 81fb99e06a3aa2811c6994a2ca09ee09 350 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 229 263 5.9E-7 T 17-10-2018 IPR022441 Parallel beta-helix repeat-2 Reactome: R-HSA-8951664|Reactome: R-HSA-983168 BJD13_09390 81fb99e06a3aa2811c6994a2ca09ee09 350 SMART SM00722 155 270 5.1E-4 T 17-10-2018 IPR006633 Carbohydrate-binding/sugar hydrolysis domain BJD13_09390 81fb99e06a3aa2811c6994a2ca09ee09 350 Pfam PF13229 Right handed beta helix region 150 270 2.0E-18 T 17-10-2018 IPR039448 Right handed beta helix domain BJD13_09390 81fb99e06a3aa2811c6994a2ca09ee09 350 SMART SM00710 288 311 1600.0 T 17-10-2018 IPR006626 Parallel beta-helix repeat BJD13_09390 81fb99e06a3aa2811c6994a2ca09ee09 350 SMART SM00710 249 271 61.0 T 17-10-2018 IPR006626 Parallel beta-helix repeat BJD13_09390 81fb99e06a3aa2811c6994a2ca09ee09 350 SMART SM00710 226 248 14.0 T 17-10-2018 IPR006626 Parallel beta-helix repeat BJD13_09390 81fb99e06a3aa2811c6994a2ca09ee09 350 SMART SM00710 203 225 620.0 T 17-10-2018 IPR006626 Parallel beta-helix repeat BJD13_09390 81fb99e06a3aa2811c6994a2ca09ee09 350 SMART SM00710 180 202 59.0 T 17-10-2018 IPR006626 Parallel beta-helix repeat BJD13_09390 81fb99e06a3aa2811c6994a2ca09ee09 350 SMART SM00710 120 163 6400.0 T 17-10-2018 IPR006626 Parallel beta-helix repeat BJD13_09390 81fb99e06a3aa2811c6994a2ca09ee09 350 SUPERFAMILY SSF51126 44 339 4.79E-36 T 17-10-2018 IPR011050 Pectin lyase fold/virulence factor BJD13_09390 81fb99e06a3aa2811c6994a2ca09ee09 350 Gene3D G3DSA:2.160.20.10 45 346 4.4E-26 T 17-10-2018 IPR012334 Pectin lyase fold BJD13_16300 5756196beb838a4c7b4c55386cc7875c 162 Gene3D G3DSA:1.10.10.10 1 150 5.7E-25 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_16300 5756196beb838a4c7b4c55386cc7875c 162 SMART SM00347 28 129 3.4E-12 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD13_16300 5756196beb838a4c7b4c55386cc7875c 162 Pfam PF12802 MarR family 33 93 5.4E-18 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD13_16300 5756196beb838a4c7b4c55386cc7875c 162 SUPERFAMILY SSF46785 8 146 4.06E-25 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_17195 ed0169f935b82b4aefcd7fe5ba483405 175 Gene3D G3DSA:3.90.1340.10 2 59 3.7E-14 T 17-10-2018 IPR037053 Phage tail collar domain superfamily BJD13_17195 ed0169f935b82b4aefcd7fe5ba483405 175 SUPERFAMILY SSF88874 1 169 3.05E-47 T 17-10-2018 BJD13_17195 ed0169f935b82b4aefcd7fe5ba483405 175 Pfam PF07484 Phage Tail Collar Domain 7 63 1.6E-22 T 17-10-2018 IPR011083 Phage tail collar domain BJD13_21990 07072895d4f3aff13bed5a91208d673e 695 SUPERFAMILY SSF48317 244 444 2.62E-26 T 17-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily BJD13_21990 07072895d4f3aff13bed5a91208d673e 695 Pfam PF01569 PAP2 superfamily 355 435 6.6E-11 T 17-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BJD13_21990 07072895d4f3aff13bed5a91208d673e 695 Gene3D G3DSA:1.20.144.10 350 446 8.3E-16 T 17-10-2018 BJD13_21990 07072895d4f3aff13bed5a91208d673e 695 Pfam PF14067 LssY C-terminus 499 607 1.5E-9 T 17-10-2018 IPR025902 LssY-like C-terminal domain BJD13_21990 07072895d4f3aff13bed5a91208d673e 695 Pfam PF09335 SNARE associated Golgi protein 39 162 1.6E-19 T 17-10-2018 IPR032816 SNARE associated Golgi protein BJD13_17005 ff1f634daebb2e82331da9e404f6f4cb 574 Pfam PF02096 60Kd inner membrane protein 380 558 4.4E-55 T 17-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BJD13_17005 ff1f634daebb2e82331da9e404f6f4cb 574 Gene3D G3DSA:2.70.98.90 86 357 1.3E-68 T 17-10-2018 IPR038221 YidC, periplasmic domain superfamily BJD13_17005 ff1f634daebb2e82331da9e404f6f4cb 574 PRINTS PR01900 YidC translocation/secretion protein signature 494 509 1.9E-17 T 17-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BJD13_17005 ff1f634daebb2e82331da9e404f6f4cb 574 PRINTS PR01900 YidC translocation/secretion protein signature 514 538 1.9E-17 T 17-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BJD13_17005 ff1f634daebb2e82331da9e404f6f4cb 574 PRINTS PR01900 YidC translocation/secretion protein signature 365 381 1.9E-17 T 17-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BJD13_17005 ff1f634daebb2e82331da9e404f6f4cb 574 PRINTS PR00701 60kDa inner membrane protein signature 2 23 2.9E-51 T 17-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BJD13_17005 ff1f634daebb2e82331da9e404f6f4cb 574 PRINTS PR00701 60kDa inner membrane protein signature 441 464 2.9E-51 T 17-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BJD13_17005 ff1f634daebb2e82331da9e404f6f4cb 574 PRINTS PR00701 60kDa inner membrane protein signature 240 258 2.9E-51 T 17-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BJD13_17005 ff1f634daebb2e82331da9e404f6f4cb 574 PRINTS PR00701 60kDa inner membrane protein signature 488 510 2.9E-51 T 17-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BJD13_17005 ff1f634daebb2e82331da9e404f6f4cb 574 PRINTS PR00701 60kDa inner membrane protein signature 274 289 2.9E-51 T 17-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BJD13_17005 ff1f634daebb2e82331da9e404f6f4cb 574 PRINTS PR00701 60kDa inner membrane protein signature 525 548 2.9E-51 T 17-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BJD13_17005 ff1f634daebb2e82331da9e404f6f4cb 574 PRINTS PR00701 60kDa inner membrane protein signature 184 204 2.9E-51 T 17-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BJD13_17005 ff1f634daebb2e82331da9e404f6f4cb 574 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 4 377 5.5E-68 T 17-10-2018 IPR028053 Membrane insertase YidC, N-terminal BJD13_17005 ff1f634daebb2e82331da9e404f6f4cb 574 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 379 558 2.6E-65 T 17-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_17005 ff1f634daebb2e82331da9e404f6f4cb 574 Pfam PF14849 YidC periplasmic domain 91 369 1.8E-64 T 17-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain BJD13_17005 ff1f634daebb2e82331da9e404f6f4cb 574 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 561 22.289 T 17-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 BJD13_10390 cf58e8979154c449c104598c82cc21ae 355 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 17-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 BJD13_10390 cf58e8979154c449c104598c82cc21ae 355 Gene3D G3DSA:2.70.210.12 1 158 5.7E-61 T 17-10-2018 IPR036726 GTP1/OBG domain superfamily BJD13_10390 cf58e8979154c449c104598c82cc21ae 355 SUPERFAMILY SSF82051 3 158 1.24E-57 T 17-10-2018 IPR036726 GTP1/OBG domain superfamily BJD13_10390 cf58e8979154c449c104598c82cc21ae 355 PIRSF PIRSF002401 1 354 2.0E-132 T 17-10-2018 IPR035101 GTP-binding protein, Obg-type BJD13_10390 cf58e8979154c449c104598c82cc21ae 355 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 340 4.4E-136 T 17-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 BJD13_10390 cf58e8979154c449c104598c82cc21ae 355 Pfam PF01018 GTP1/OBG 4 158 3.7E-59 T 17-10-2018 IPR006169 GTP1/OBG domain BJD13_10390 cf58e8979154c449c104598c82cc21ae 355 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 7.6E-35 T 17-10-2018 IPR006073 GTP binding domain GO:0005525 BJD13_10390 cf58e8979154c449c104598c82cc21ae 355 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 7.6E-35 T 17-10-2018 IPR006073 GTP binding domain GO:0005525 BJD13_10390 cf58e8979154c449c104598c82cc21ae 355 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 7.6E-35 T 17-10-2018 IPR006073 GTP binding domain GO:0005525 BJD13_10390 cf58e8979154c449c104598c82cc21ae 355 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 7.6E-35 T 17-10-2018 IPR006073 GTP binding domain GO:0005525 BJD13_10390 cf58e8979154c449c104598c82cc21ae 355 Pfam PF01926 50S ribosome-binding GTPase 161 293 1.3E-23 T 17-10-2018 IPR006073 GTP binding domain GO:0005525 BJD13_10390 cf58e8979154c449c104598c82cc21ae 355 SUPERFAMILY SSF52540 152 345 6.33E-48 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_10390 cf58e8979154c449c104598c82cc21ae 355 Hamap MF_01454 GTPase Obg [obg]. 2 342 47.418 T 17-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 BJD13_10390 cf58e8979154c449c104598c82cc21ae 355 Gene3D G3DSA:3.40.50.300 159 346 7.5E-48 T 17-10-2018 BJD13_01520 31fa8e599e023b8a0829274d49676f3a 236 Pfam PF04335 VirB8 protein 28 231 4.1E-44 T 17-10-2018 IPR007430 Bacterial virulence protein VirB8 GO:0016020 BJD13_01520 31fa8e599e023b8a0829274d49676f3a 236 SUPERFAMILY SSF54427 97 232 7.01E-19 T 17-10-2018 IPR032710 NTF2-like domain superfamily BJD13_01520 31fa8e599e023b8a0829274d49676f3a 236 Gene3D G3DSA:3.10.450.230 94 235 3.4E-8 T 17-10-2018 BJD13_20390 d4b9720663bd04a898fb2663bc615b9c 223 Gene3D G3DSA:3.30.1330.60 43 208 8.6E-38 T 17-10-2018 IPR036737 OmpA-like domain superfamily BJD13_20390 d4b9720663bd04a898fb2663bc615b9c 223 Pfam PF00691 OmpA family 92 196 2.8E-19 T 17-10-2018 IPR006665 OmpA-like domain BJD13_20390 d4b9720663bd04a898fb2663bc615b9c 223 SUPERFAMILY SSF103088 82 200 8.76E-29 T 17-10-2018 IPR036737 OmpA-like domain superfamily BJD13_16385 61b132ac051469f4f10ddfb0f56d9600 1115 SMART SM00862 35 110 5.3E-19 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD13_16385 61b132ac051469f4f10ddfb0f56d9600 1115 Gene3D G3DSA:1.10.10.10 12 112 1.6E-24 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_16385 61b132ac051469f4f10ddfb0f56d9600 1115 SUPERFAMILY SSF48452 684 839 2.79E-10 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_16385 61b132ac051469f4f10ddfb0f56d9600 1115 Pfam PF00486 Transcriptional regulatory protein, C terminal 35 110 5.1E-19 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD13_16385 61b132ac051469f4f10ddfb0f56d9600 1115 Gene3D G3DSA:1.25.40.10 780 961 1.9E-7 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_16385 61b132ac051469f4f10ddfb0f56d9600 1115 SUPERFAMILY SSF52540 142 381 2.55E-10 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_16385 61b132ac051469f4f10ddfb0f56d9600 1115 SUPERFAMILY SSF46894 17 110 1.7E-19 T 17-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BJD13_16385 61b132ac051469f4f10ddfb0f56d9600 1115 Gene3D G3DSA:3.40.50.300 139 368 2.0E-6 T 17-10-2018 BJD13_16385 61b132ac051469f4f10ddfb0f56d9600 1115 Gene3D G3DSA:1.25.40.10 625 779 3.7E-7 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_16385 61b132ac051469f4f10ddfb0f56d9600 1115 Pfam PF13191 AAA ATPase domain 150 324 3.7E-11 T 17-10-2018 BJD13_06605 1426e7b34f594e1accda6d7b959d6ede 337 PIRSF PIRSF002888 3 327 1.0E-92 T 17-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 BJD13_06605 1426e7b34f594e1accda6d7b959d6ede 337 SUPERFAMILY SSF101801 249 321 2.22E-15 T 17-10-2018 IPR036429 SpoA-like superfamily BJD13_06605 1426e7b34f594e1accda6d7b959d6ede 337 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 5 318 4.1E-105 T 17-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 BJD13_06605 1426e7b34f594e1accda6d7b959d6ede 337 Pfam PF02154 Flagellar motor switch protein FliM 38 230 8.1E-74 T 17-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 BJD13_06605 1426e7b34f594e1accda6d7b959d6ede 337 Gene3D G3DSA:3.40.1550.10 44 231 1.7E-55 T 17-10-2018 IPR028976 CheC-like superfamily BJD13_06605 1426e7b34f594e1accda6d7b959d6ede 337 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 251 318 1.5E-19 T 17-10-2018 IPR001543 Surface presentation of antigen (SpoA) BJD13_06605 1426e7b34f594e1accda6d7b959d6ede 337 SUPERFAMILY SSF103039 7 231 9.94E-20 T 17-10-2018 IPR028976 CheC-like superfamily BJD13_06605 1426e7b34f594e1accda6d7b959d6ede 337 Gene3D G3DSA:2.30.330.10 243 325 1.1E-5 T 17-10-2018 IPR036429 SpoA-like superfamily BJD13_06605 1426e7b34f594e1accda6d7b959d6ede 337 PRINTS PR00955 Flagellar motor switch protein FliM signature 212 230 1.1E-24 T 17-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 BJD13_06605 1426e7b34f594e1accda6d7b959d6ede 337 PRINTS PR00955 Flagellar motor switch protein FliM signature 4 17 1.1E-24 T 17-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 BJD13_06605 1426e7b34f594e1accda6d7b959d6ede 337 PRINTS PR00955 Flagellar motor switch protein FliM signature 89 105 1.1E-24 T 17-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 BJD13_06605 1426e7b34f594e1accda6d7b959d6ede 337 PRINTS PR00955 Flagellar motor switch protein FliM signature 114 133 1.1E-24 T 17-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 BJD13_09960 3fc386c7a6319840982444df8e53ee62 444 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 426 436 - T 17-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site BJD13_09960 3fc386c7a6319840982444df8e53ee62 444 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 374 404 - T 17-10-2018 IPR030390 RNA methyltransferase TrmA, active site BJD13_09960 3fc386c7a6319840982444df8e53ee62 444 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 274 443 1.5E-23 T 17-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 BJD13_09960 3fc386c7a6319840982444df8e53ee62 444 Gene3D G3DSA:2.40.50.140 2 86 1.6E-25 T 17-10-2018 BJD13_09960 3fc386c7a6319840982444df8e53ee62 444 Gene3D G3DSA:3.40.50.150 88 438 7.8E-102 T 17-10-2018 BJD13_09960 3fc386c7a6319840982444df8e53ee62 444 SUPERFAMILY SSF50249 14 73 8.0E-11 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD13_09960 3fc386c7a6319840982444df8e53ee62 444 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 14 444 67.903 T 17-10-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 BJD13_09960 3fc386c7a6319840982444df8e53ee62 444 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 264 436 3.0E-55 T 17-10-2018 BJD13_09960 3fc386c7a6319840982444df8e53ee62 444 SUPERFAMILY SSF53335 75 443 5.77E-81 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_09960 3fc386c7a6319840982444df8e53ee62 444 Gene3D G3DSA:3.40.1350.30 134 275 7.8E-102 T 17-10-2018 BJD13_22750 bd5180d9c7198521a0ab45785d9038b9 537 SMART SM00387 423 532 9.5E-24 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_22750 bd5180d9c7198521a0ab45785d9038b9 537 PRINTS PR00344 Bacterial sensor protein C-terminal signature 492 510 7.6E-11 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_22750 bd5180d9c7198521a0ab45785d9038b9 537 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 477 7.6E-11 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_22750 bd5180d9c7198521a0ab45785d9038b9 537 PRINTS PR00344 Bacterial sensor protein C-terminal signature 481 491 7.6E-11 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_22750 bd5180d9c7198521a0ab45785d9038b9 537 PRINTS PR00344 Bacterial sensor protein C-terminal signature 516 529 7.6E-11 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_22750 bd5180d9c7198521a0ab45785d9038b9 537 Gene3D G3DSA:1.10.287.130 304 380 6.4E-16 T 17-10-2018 BJD13_22750 bd5180d9c7198521a0ab45785d9038b9 537 Gene3D G3DSA:3.30.565.10 384 532 7.9E-30 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_22750 bd5180d9c7198521a0ab45785d9038b9 537 SUPERFAMILY SSF55874 373 528 9.69E-31 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_22750 bd5180d9c7198521a0ab45785d9038b9 537 SMART SM00388 315 381 9.4E-17 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_22750 bd5180d9c7198521a0ab45785d9038b9 537 Pfam PF00512 His Kinase A (phospho-acceptor) domain 315 379 2.3E-14 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_22750 bd5180d9c7198521a0ab45785d9038b9 537 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 424 529 3.4E-16 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_22750 bd5180d9c7198521a0ab45785d9038b9 537 SUPERFAMILY SSF47384 312 379 2.35E-14 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD13_22065 7b3be41f4c2288b0cf7a1a717970cddd 1060 Gene3D G3DSA:2.60.40.1120 27 116 1.8E-5 T 17-10-2018 BJD13_22065 7b3be41f4c2288b0cf7a1a717970cddd 1060 Pfam PF07715 TonB-dependent Receptor Plug Domain 133 236 1.7E-9 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_22065 7b3be41f4c2288b0cf7a1a717970cddd 1060 Gene3D G3DSA:2.170.130.10 130 244 1.1E-9 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_22065 7b3be41f4c2288b0cf7a1a717970cddd 1060 SUPERFAMILY SSF56935 115 1060 2.66E-67 T 17-10-2018 BJD13_22065 7b3be41f4c2288b0cf7a1a717970cddd 1060 SUPERFAMILY SSF49452 22 101 2.55E-7 T 17-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 BJD13_22065 7b3be41f4c2288b0cf7a1a717970cddd 1060 Pfam PF13620 Carboxypeptidase regulatory-like domain 28 102 5.1E-8 T 17-10-2018 BJD13_05065 2cfe84439bcb3ce5c581386c37387436 213 Pfam PF00072 Response regulator receiver domain 10 121 2.3E-29 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_05065 2cfe84439bcb3ce5c581386c37387436 213 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 203 6.9E-21 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_05065 2cfe84439bcb3ce5c581386c37387436 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 4.2E-14 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_05065 2cfe84439bcb3ce5c581386c37387436 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 4.2E-14 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_05065 2cfe84439bcb3ce5c581386c37387436 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 4.2E-14 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_05065 2cfe84439bcb3ce5c581386c37387436 213 SUPERFAMILY SSF52172 8 129 2.56E-35 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_05065 2cfe84439bcb3ce5c581386c37387436 213 SUPERFAMILY SSF46894 139 210 1.16E-21 T 17-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BJD13_05065 2cfe84439bcb3ce5c581386c37387436 213 SMART SM00448 8 121 2.8E-33 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_05065 2cfe84439bcb3ce5c581386c37387436 213 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_05065 2cfe84439bcb3ce5c581386c37387436 213 Gene3D G3DSA:3.40.50.12740 9 209 1.3E-66 T 17-10-2018 BJD13_05065 2cfe84439bcb3ce5c581386c37387436 213 SMART SM00421 146 203 7.5E-25 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_19825 89e2d89f670bb98d5b3f655a5d91727f 280 Pfam PF01936 NYN domain 10 144 2.8E-31 T 17-10-2018 IPR021139 NYN domain, limkain-b1-type BJD13_19825 89e2d89f670bb98d5b3f655a5d91727f 280 Pfam PF12872 OST-HTH/LOTUS domain 170 233 3.9E-15 T 17-10-2018 IPR025605 OST-HTH/LOTUS domain BJD13_19825 89e2d89f670bb98d5b3f655a5d91727f 280 Gene3D G3DSA:1.10.10.1880 175 238 1.6E-21 T 17-10-2018 BJD13_19825 89e2d89f670bb98d5b3f655a5d91727f 280 Gene3D G3DSA:3.40.50.1010 3 147 1.5E-12 T 17-10-2018 BJD13_14510 9009897246ce1ec1e15d1db5d47536f7 163 Pfam PF00583 Acetyltransferase (GNAT) family 41 139 3.7E-20 T 17-10-2018 IPR000182 GNAT domain BJD13_14510 9009897246ce1ec1e15d1db5d47536f7 163 Gene3D G3DSA:3.40.630.30 4 161 3.4E-52 T 17-10-2018 BJD13_14510 9009897246ce1ec1e15d1db5d47536f7 163 SUPERFAMILY SSF55729 7 154 3.43E-39 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD13_19050 e03049b10c55f3f64769335cd39a3dbb 563 Pfam PF04389 Peptidase family M28 312 528 1.2E-48 T 17-10-2018 IPR007484 Peptidase M28 BJD13_19050 e03049b10c55f3f64769335cd39a3dbb 563 SUPERFAMILY SSF52025 140 225 4.05E-9 T 17-10-2018 BJD13_19050 e03049b10c55f3f64769335cd39a3dbb 563 Pfam PF02225 PA domain 141 246 2.3E-9 T 17-10-2018 IPR003137 PA domain BJD13_19050 e03049b10c55f3f64769335cd39a3dbb 563 SUPERFAMILY SSF53187 40 539 2.45E-64 T 17-10-2018 BJD13_09815 13bdff8f1826c0ab9b822bd2636316cc 88 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 35 68 9.9E-13 T 17-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 BJD13_09815 13bdff8f1826c0ab9b822bd2636316cc 88 Gene3D G3DSA:1.20.120.910 1 72 8.8E-25 T 17-10-2018 BJD13_09815 13bdff8f1826c0ab9b822bd2636316cc 88 TIGRFAM TIGR02419 C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger protein, TraR family 12 66 2.8E-18 T 17-10-2018 IPR012783 Zinc finger, C4 DksA/TraR-type BJD13_09815 13bdff8f1826c0ab9b822bd2636316cc 88 PRINTS PR00618 DksA/TraR zinc finger signature 51 63 4.4E-5 T 17-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria BJD13_09815 13bdff8f1826c0ab9b822bd2636316cc 88 PRINTS PR00618 DksA/TraR zinc finger signature 39 50 4.4E-5 T 17-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria BJD13_09815 13bdff8f1826c0ab9b822bd2636316cc 88 SUPERFAMILY SSF57716 38 71 1.08E-8 T 17-10-2018 BJD13_09815 13bdff8f1826c0ab9b822bd2636316cc 88 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 39 63 - T 17-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site BJD13_04245 28107b5f8aca4172342432a5a601dede 214 SUPERFAMILY SSF50022 34 200 1.02E-38 T 17-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 BJD13_04245 28107b5f8aca4172342432a5a601dede 214 Gene3D G3DSA:1.20.5.510 7 44 1.6E-5 T 17-10-2018 BJD13_04245 28107b5f8aca4172342432a5a601dede 214 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 9 44 1.0E-14 T 17-10-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 BJD13_04245 28107b5f8aca4172342432a5a601dede 214 Pfam PF00355 Rieske [2Fe-2S] domain 109 182 1.5E-9 T 17-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 BJD13_04245 28107b5f8aca4172342432a5a601dede 214 Gene3D G3DSA:2.102.10.10 47 198 9.4E-43 T 17-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 BJD13_04245 28107b5f8aca4172342432a5a601dede 214 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 13 198 2.1E-68 T 17-10-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 BJD13_04245 28107b5f8aca4172342432a5a601dede 214 PRINTS PR00162 Rieske 2Fe-2S subunit signature 157 169 2.6E-5 T 17-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 BJD13_04245 28107b5f8aca4172342432a5a601dede 214 PRINTS PR00162 Rieske 2Fe-2S subunit signature 126 137 2.6E-5 T 17-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 BJD13_18640 b75f80346dc238138daf4501a6e6f8e3 86 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 5 75 7.0E-27 T 17-10-2018 IPR027354 YcgL domain BJD13_18640 b75f80346dc238138daf4501a6e6f8e3 86 Pfam PF05166 YcgL domain 4 75 7.1E-25 T 17-10-2018 IPR027354 YcgL domain BJD13_18640 b75f80346dc238138daf4501a6e6f8e3 86 Gene3D G3DSA:3.10.510.20 1 74 8.5E-24 T 17-10-2018 IPR038068 YcgL-like superfamily BJD13_18640 b75f80346dc238138daf4501a6e6f8e3 86 Hamap MF_01866 Protein YcgL [ycgL]. 1 86 20.233 T 17-10-2018 IPR027354 YcgL domain BJD13_18640 b75f80346dc238138daf4501a6e6f8e3 86 SUPERFAMILY SSF160191 1 75 1.83E-23 T 17-10-2018 IPR038068 YcgL-like superfamily BJD13_09535 b292b7771d41c53bd25736b416826fef 1196 SUPERFAMILY SSF89550 6 249 1.53E-9 T 17-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 BJD13_09535 b292b7771d41c53bd25736b416826fef 1196 Pfam PF14579 Helix-hairpin-helix motif 823 912 1.6E-26 T 17-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD13_09535 b292b7771d41c53bd25736b416826fef 1196 Pfam PF01336 OB-fold nucleic acid binding domain 1030 1098 3.4E-8 T 17-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 BJD13_09535 b292b7771d41c53bd25736b416826fef 1196 SMART SM00481 7 88 2.7E-16 T 17-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal BJD13_09535 b292b7771d41c53bd25736b416826fef 1196 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 304 748 1.9E-166 T 17-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD13_09535 b292b7771d41c53bd25736b416826fef 1196 SUPERFAMILY SSF50249 1028 1098 4.57E-5 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD13_09535 b292b7771d41c53bd25736b416826fef 1196 Gene3D G3DSA:3.20.20.140 1 281 2.8E-79 T 17-10-2018 BJD13_09535 b292b7771d41c53bd25736b416826fef 1196 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 994 0.0 T 17-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD13_09535 b292b7771d41c53bd25736b416826fef 1196 Gene3D G3DSA:1.10.10.1600 443 527 6.2E-27 T 17-10-2018 BJD13_09535 b292b7771d41c53bd25736b416826fef 1196 SUPERFAMILY SSF160975 838 888 3.01E-5 T 17-10-2018 BJD13_09535 b292b7771d41c53bd25736b416826fef 1196 Pfam PF02811 PHP domain 8 183 7.1E-25 T 17-10-2018 IPR004013 PHP domain GO:0003824 BJD13_02135 276ada384f685b0667a33c08d8b8dafc 335 SUPERFAMILY SSF50129 1 164 3.14E-30 T 17-10-2018 IPR011032 GroES-like superfamily BJD13_02135 276ada384f685b0667a33c08d8b8dafc 335 Gene3D G3DSA:3.40.50.720 141 283 4.2E-96 T 17-10-2018 BJD13_02135 276ada384f685b0667a33c08d8b8dafc 335 SMART SM00829 13 333 2.4E-19 T 17-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 BJD13_02135 276ada384f685b0667a33c08d8b8dafc 335 SUPERFAMILY SSF51735 136 307 9.69E-48 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_02135 276ada384f685b0667a33c08d8b8dafc 335 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 88 5.5E-7 T 17-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 BJD13_02135 276ada384f685b0667a33c08d8b8dafc 335 Pfam PF00107 Zinc-binding dehydrogenase 170 294 3.0E-31 T 17-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 BJD13_02135 276ada384f685b0667a33c08d8b8dafc 335 Gene3D G3DSA:3.90.180.10 21 324 4.2E-96 T 17-10-2018 BJD13_10795 da04e888685eeb2c86a1d703d513c998 101 Gene3D G3DSA:3.30.40.10 1 88 2.4E-27 T 17-10-2018 IPR013083 Zinc finger, RING/FYVE/PHD-type BJD13_10795 da04e888685eeb2c86a1d703d513c998 101 SUPERFAMILY SSF57850 3 94 2.12E-27 T 17-10-2018 BJD13_10795 da04e888685eeb2c86a1d703d513c998 101 Pfam PF02148 Zn-finger in ubiquitin-hydrolases and other protein 21 87 2.8E-10 T 17-10-2018 IPR001607 Zinc finger, UBP-type GO:0008270 BJD13_04880 b4552f4a77c5a1bbca3d04482b64fcf4 410 TIGRFAM TIGR00261 traB: TraB family protein 32 407 3.8E-78 T 17-10-2018 IPR005230 Pheromone shutdown, TraB, bacterial/archaeal BJD13_04880 b4552f4a77c5a1bbca3d04482b64fcf4 410 Pfam PF01963 TraB family 25 246 9.6E-25 T 17-10-2018 IPR002816 Pheromone shutdown, TraB BJD13_09935 ec21e946e1f0f0579500a9e308f2a455 334 Gene3D G3DSA:3.20.20.300 1 312 4.9E-106 T 17-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 BJD13_09935 ec21e946e1f0f0579500a9e308f2a455 334 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 3 290 1.2E-78 T 17-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BJD13_09935 ec21e946e1f0f0579500a9e308f2a455 334 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 1 330 44.777 T 17-10-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 BJD13_09935 ec21e946e1f0f0579500a9e308f2a455 334 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 233 250 - T 17-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 BJD13_09935 ec21e946e1f0f0579500a9e308f2a455 334 SUPERFAMILY SSF51445 1 295 9.69E-78 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily BJD13_01925 f1c74c740e1dd715fc8eafcc645b94bf 252 SMART SM00671 143 178 0.0018 T 17-10-2018 IPR006597 Sel1-like repeat BJD13_01925 f1c74c740e1dd715fc8eafcc645b94bf 252 SMART SM00671 35 70 2.2E-6 T 17-10-2018 IPR006597 Sel1-like repeat BJD13_01925 f1c74c740e1dd715fc8eafcc645b94bf 252 SMART SM00671 107 142 1.4E-7 T 17-10-2018 IPR006597 Sel1-like repeat BJD13_01925 f1c74c740e1dd715fc8eafcc645b94bf 252 SMART SM00671 71 106 1.1E-7 T 17-10-2018 IPR006597 Sel1-like repeat BJD13_01925 f1c74c740e1dd715fc8eafcc645b94bf 252 SUPERFAMILY SSF81901 17 211 5.95E-44 T 17-10-2018 BJD13_01925 f1c74c740e1dd715fc8eafcc645b94bf 252 Pfam PF08238 Sel1 repeat 71 105 7.8E-6 T 17-10-2018 IPR006597 Sel1-like repeat BJD13_01925 f1c74c740e1dd715fc8eafcc645b94bf 252 Pfam PF08238 Sel1 repeat 18 32 32.0 T 17-10-2018 IPR006597 Sel1-like repeat BJD13_01925 f1c74c740e1dd715fc8eafcc645b94bf 252 Pfam PF08238 Sel1 repeat 143 178 0.0072 T 17-10-2018 IPR006597 Sel1-like repeat BJD13_01925 f1c74c740e1dd715fc8eafcc645b94bf 252 Pfam PF08238 Sel1 repeat 36 69 2.6E-5 T 17-10-2018 IPR006597 Sel1-like repeat BJD13_01925 f1c74c740e1dd715fc8eafcc645b94bf 252 Pfam PF08238 Sel1 repeat 198 210 42.0 T 17-10-2018 IPR006597 Sel1-like repeat BJD13_01925 f1c74c740e1dd715fc8eafcc645b94bf 252 Pfam PF08238 Sel1 repeat 110 142 1.6E-7 T 17-10-2018 IPR006597 Sel1-like repeat BJD13_01925 f1c74c740e1dd715fc8eafcc645b94bf 252 Gene3D G3DSA:1.25.40.10 10 242 1.3E-51 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_01585 0408b246ff15bf52a5a0d27d515a5614 190 Pfam PF06693 Protein of unknown function (DUF1190) 28 180 3.0E-30 T 17-10-2018 IPR009576 Biofilm formation YgiB BJD13_18730 a3bc87cce211f434c95fe41438fcea7b 133 Gene3D G3DSA:3.10.129.10 3 132 4.4E-43 T 17-10-2018 BJD13_18730 a3bc87cce211f434c95fe41438fcea7b 133 SUPERFAMILY SSF54637 5 129 6.73E-40 T 17-10-2018 IPR029069 HotDog domain superfamily BJD13_18730 a3bc87cce211f434c95fe41438fcea7b 133 Pfam PF03061 Thioesterase superfamily 27 99 3.1E-18 T 17-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 BJD13_22215 2d4e4dab943ef0b6898a29eb40b09fbf 429 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 14 423 4.0E-209 T 17-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 BJD13_22215 2d4e4dab943ef0b6898a29eb40b09fbf 429 Gene3D G3DSA:2.20.28.60 5 51 1.9E-16 T 17-10-2018 BJD13_22215 2d4e4dab943ef0b6898a29eb40b09fbf 429 PIRSF PIRSF001369 38 429 4.6E-163 T 17-10-2018 IPR024176 Citrate synthase, bacterial-type BJD13_22215 2d4e4dab943ef0b6898a29eb40b09fbf 429 ProSitePatterns PS00480 Citrate synthase signature. 304 316 - T 17-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 BJD13_22215 2d4e4dab943ef0b6898a29eb40b09fbf 429 Gene3D G3DSA:1.10.230.10 269 377 4.8E-147 T 17-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain BJD13_22215 2d4e4dab943ef0b6898a29eb40b09fbf 429 PRINTS PR00143 Citrate synthase signature 297 317 1.0E-54 T 17-10-2018 IPR002020 Citrate synthase GO:0046912 BJD13_22215 2d4e4dab943ef0b6898a29eb40b09fbf 429 PRINTS PR00143 Citrate synthase signature 360 376 1.0E-54 T 17-10-2018 IPR002020 Citrate synthase GO:0046912 BJD13_22215 2d4e4dab943ef0b6898a29eb40b09fbf 429 PRINTS PR00143 Citrate synthase signature 380 394 1.0E-54 T 17-10-2018 IPR002020 Citrate synthase GO:0046912 BJD13_22215 2d4e4dab943ef0b6898a29eb40b09fbf 429 PRINTS PR00143 Citrate synthase signature 220 235 1.0E-54 T 17-10-2018 IPR002020 Citrate synthase GO:0046912 BJD13_22215 2d4e4dab943ef0b6898a29eb40b09fbf 429 PRINTS PR00143 Citrate synthase signature 166 179 1.0E-54 T 17-10-2018 IPR002020 Citrate synthase GO:0046912 BJD13_22215 2d4e4dab943ef0b6898a29eb40b09fbf 429 PRINTS PR00143 Citrate synthase signature 242 270 1.0E-54 T 17-10-2018 IPR002020 Citrate synthase GO:0046912 BJD13_22215 2d4e4dab943ef0b6898a29eb40b09fbf 429 Gene3D G3DSA:1.10.580.10 58 412 4.8E-147 T 17-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 BJD13_22215 2d4e4dab943ef0b6898a29eb40b09fbf 429 Pfam PF00285 Citrate synthase, C-terminal domain 47 412 2.9E-136 T 17-10-2018 IPR002020 Citrate synthase GO:0046912 BJD13_22215 2d4e4dab943ef0b6898a29eb40b09fbf 429 SUPERFAMILY SSF48256 8 429 1.57E-167 T 17-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 BJD13_05295 29ec5a7ec87d2c7e0815ce41c8812b42 476 Gene3D G3DSA:3.30.360.10 166 461 2.4E-142 T 17-10-2018 BJD13_05295 29ec5a7ec87d2c7e0815ce41c8812b42 476 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 179 465 8.2E-96 T 17-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BJD13_05295 29ec5a7ec87d2c7e0815ce41c8812b42 476 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 6 176 4.1E-43 T 17-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BJD13_05295 29ec5a7ec87d2c7e0815ce41c8812b42 476 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 3 465 4.7E-138 T 17-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BJD13_05295 29ec5a7ec87d2c7e0815ce41c8812b42 476 Gene3D G3DSA:3.40.50.720 5 422 2.4E-142 T 17-10-2018 BJD13_05295 29ec5a7ec87d2c7e0815ce41c8812b42 476 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 2 467 68.601 T 17-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BJD13_05295 29ec5a7ec87d2c7e0815ce41c8812b42 476 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 156 184 3.5E-40 T 17-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BJD13_05295 29ec5a7ec87d2c7e0815ce41c8812b42 476 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 132 145 3.5E-40 T 17-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BJD13_05295 29ec5a7ec87d2c7e0815ce41c8812b42 476 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 313 339 3.5E-40 T 17-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BJD13_05295 29ec5a7ec87d2c7e0815ce41c8812b42 476 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 208 225 3.5E-40 T 17-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BJD13_05295 29ec5a7ec87d2c7e0815ce41c8812b42 476 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 226 242 3.5E-40 T 17-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BJD13_05295 29ec5a7ec87d2c7e0815ce41c8812b42 476 SUPERFAMILY SSF55347 171 466 8.5E-97 T 17-10-2018 BJD13_05295 29ec5a7ec87d2c7e0815ce41c8812b42 476 SUPERFAMILY SSF51735 3 179 1.18E-42 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_05295 29ec5a7ec87d2c7e0815ce41c8812b42 476 PIRSF PIRSF000110 1 476 5.0E-164 T 17-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BJD13_08060 8248c13d2f57c9d2e87e2b91d6efab11 446 SUPERFAMILY SSF56176 355 442 3.54E-23 T 17-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 BJD13_08060 8248c13d2f57c9d2e87e2b91d6efab11 446 SMART SM00116 231 280 21.0 T 17-10-2018 IPR000644 CBS domain BJD13_08060 8248c13d2f57c9d2e87e2b91d6efab11 446 SMART SM00116 292 340 0.88 T 17-10-2018 IPR000644 CBS domain BJD13_08060 8248c13d2f57c9d2e87e2b91d6efab11 446 SUPERFAMILY SSF54631 209 341 9.32E-26 T 17-10-2018 BJD13_08060 8248c13d2f57c9d2e87e2b91d6efab11 446 SMART SM01091 356 437 1.9E-31 T 17-10-2018 IPR005170 Transporter-associated domain BJD13_08060 8248c13d2f57c9d2e87e2b91d6efab11 446 Gene3D G3DSA:3.10.580.10 192 336 3.6E-41 T 17-10-2018 BJD13_08060 8248c13d2f57c9d2e87e2b91d6efab11 446 Pfam PF03471 Transporter associated domain 358 436 3.5E-20 T 17-10-2018 IPR005170 Transporter-associated domain BJD13_08060 8248c13d2f57c9d2e87e2b91d6efab11 446 Pfam PF00571 CBS domain 292 340 2.4E-6 T 17-10-2018 IPR000644 CBS domain BJD13_08060 8248c13d2f57c9d2e87e2b91d6efab11 446 Gene3D G3DSA:3.30.465.10 344 437 1.1E-33 T 17-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 BJD13_08060 8248c13d2f57c9d2e87e2b91d6efab11 446 Gene3D G3DSA:3.90.1280.20 230 294 3.6E-41 T 17-10-2018 BJD13_08060 8248c13d2f57c9d2e87e2b91d6efab11 446 Pfam PF01595 Domain of unknown function DUF21 5 207 5.1E-47 T 17-10-2018 IPR002550 CNNM, transmembrane domain BJD13_16595 48f0445267228382b6b20387c853890b 147 PRINTS PR00502 NUDIX hydrolase family signature 52 67 3.5E-6 T 17-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 BJD13_16595 48f0445267228382b6b20387c853890b 147 PRINTS PR00502 NUDIX hydrolase family signature 38 52 3.5E-6 T 17-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 BJD13_16595 48f0445267228382b6b20387c853890b 147 ProSitePatterns PS00893 Nudix box signature. 43 64 - T 17-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 BJD13_16595 48f0445267228382b6b20387c853890b 147 Gene3D G3DSA:3.90.79.10 7 142 7.8E-34 T 17-10-2018 BJD13_16595 48f0445267228382b6b20387c853890b 147 Pfam PF00293 NUDIX domain 10 128 8.9E-20 T 17-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 BJD13_16595 48f0445267228382b6b20387c853890b 147 SUPERFAMILY SSF55811 7 140 1.07E-30 T 17-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BJD13_20885 9ee1aea77a856721ef80464f7215415f 266 Pfam PF00119 ATP synthase A chain 39 260 6.8E-55 T 17-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD13_20885 9ee1aea77a856721ef80464f7215415f 266 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 32 260 5.5E-42 T 17-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD13_20885 9ee1aea77a856721ef80464f7215415f 266 PRINTS PR00123 ATP synthase A subunit signature 246 261 1.0E-12 T 17-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD13_20885 9ee1aea77a856721ef80464f7215415f 266 PRINTS PR00123 ATP synthase A subunit signature 96 112 1.0E-12 T 17-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD13_20885 9ee1aea77a856721ef80464f7215415f 266 PRINTS PR00123 ATP synthase A subunit signature 193 215 1.0E-12 T 17-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD13_20885 9ee1aea77a856721ef80464f7215415f 266 SUPERFAMILY SSF81336 88 260 5.49E-39 T 17-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD13_20885 9ee1aea77a856721ef80464f7215415f 266 ProSitePatterns PS00449 ATP synthase a subunit signature. 196 205 - T 17-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD13_20885 9ee1aea77a856721ef80464f7215415f 266 Hamap MF_01393 ATP synthase subunit a [atpB]. 12 266 15.037 T 17-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD13_20885 9ee1aea77a856721ef80464f7215415f 266 Gene3D G3DSA:1.20.120.220 87 266 2.9E-51 T 17-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD13_06710 42b3bd5357b13e85cd7da20bd5618bfe 342 SUPERFAMILY SSF102114 9 235 5.1E-23 T 17-10-2018 BJD13_06710 42b3bd5357b13e85cd7da20bd5618bfe 342 Gene3D G3DSA:3.20.20.70 7 308 7.3E-21 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD13_09870 9ef526655f502fa436a776f182223a61 569 Gene3D G3DSA:1.20.1440.210 46 172 1.8E-28 T 17-10-2018 BJD13_09870 9ef526655f502fa436a776f182223a61 569 SUPERFAMILY SSF55781 257 398 1.64E-12 T 17-10-2018 BJD13_09870 9ef526655f502fa436a776f182223a61 569 Pfam PF00990 Diguanylate cyclase, GGDEF domain 400 557 8.4E-49 T 17-10-2018 IPR000160 GGDEF domain BJD13_09870 9ef526655f502fa436a776f182223a61 569 Gene3D G3DSA:3.30.70.270 396 563 1.8E-59 T 17-10-2018 BJD13_09870 9ef526655f502fa436a776f182223a61 569 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 395 559 9.9E-56 T 17-10-2018 IPR000160 GGDEF domain BJD13_09870 9ef526655f502fa436a776f182223a61 569 Pfam PF05227 CHASE3 domain 40 174 1.3E-32 T 17-10-2018 IPR007891 CHASE3 BJD13_09870 9ef526655f502fa436a776f182223a61 569 SMART SM00267 388 561 2.7E-64 T 17-10-2018 IPR000160 GGDEF domain BJD13_09870 9ef526655f502fa436a776f182223a61 569 SUPERFAMILY SSF55073 404 561 6.12E-50 T 17-10-2018 IPR029787 Nucleotide cyclase BJD13_09870 9ef526655f502fa436a776f182223a61 569 Gene3D G3DSA:3.30.450.40 228 395 5.6E-17 T 17-10-2018 IPR029016 GAF-like domain superfamily BJD13_09870 9ef526655f502fa436a776f182223a61 569 SMART SM00065 255 396 0.0046 T 17-10-2018 IPR003018 GAF domain GO:0005515 BJD13_09870 9ef526655f502fa436a776f182223a61 569 Pfam PF13185 GAF domain 273 386 4.9E-7 T 17-10-2018 IPR003018 GAF domain GO:0005515 BJD13_03520 bf8de4dc44135e4b8e9da2423a409f00 119 Gene3D G3DSA:1.10.1900.20 56 118 2.2E-27 T 17-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_03520 bf8de4dc44135e4b8e9da2423a409f00 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 1.9E-48 T 17-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_03520 bf8de4dc44135e4b8e9da2423a409f00 119 Pfam PF00453 Ribosomal protein L20 3 109 3.7E-47 T 17-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_03520 bf8de4dc44135e4b8e9da2423a409f00 119 Gene3D G3DSA:1.10.720.90 2 55 3.1E-21 T 17-10-2018 BJD13_03520 bf8de4dc44135e4b8e9da2423a409f00 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 17-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_03520 bf8de4dc44135e4b8e9da2423a409f00 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 29.372 T 17-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_03520 bf8de4dc44135e4b8e9da2423a409f00 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 20 70 1.0E-21 T 17-10-2018 BJD13_03520 bf8de4dc44135e4b8e9da2423a409f00 119 SUPERFAMILY SSF74731 3 117 1.99E-48 T 17-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_03520 bf8de4dc44135e4b8e9da2423a409f00 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 2.5E-39 T 17-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_03520 bf8de4dc44135e4b8e9da2423a409f00 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 2.5E-39 T 17-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_03520 bf8de4dc44135e4b8e9da2423a409f00 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 2.5E-39 T 17-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_15150 a7d8c61fa42bdcf25f0c2df0c2883332 273 PRINTS PR00783 Major intrinsic protein family signature 183 205 7.4E-41 T 17-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BJD13_15150 a7d8c61fa42bdcf25f0c2df0c2883332 273 PRINTS PR00783 Major intrinsic protein family signature 86 105 7.4E-41 T 17-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BJD13_15150 a7d8c61fa42bdcf25f0c2df0c2883332 273 PRINTS PR00783 Major intrinsic protein family signature 49 73 7.4E-41 T 17-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BJD13_15150 a7d8c61fa42bdcf25f0c2df0c2883332 273 PRINTS PR00783 Major intrinsic protein family signature 149 167 7.4E-41 T 17-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BJD13_15150 a7d8c61fa42bdcf25f0c2df0c2883332 273 PRINTS PR00783 Major intrinsic protein family signature 231 251 7.4E-41 T 17-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BJD13_15150 a7d8c61fa42bdcf25f0c2df0c2883332 273 PRINTS PR00783 Major intrinsic protein family signature 7 26 7.4E-41 T 17-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BJD13_15150 a7d8c61fa42bdcf25f0c2df0c2883332 273 Pfam PF00230 Major intrinsic protein 4 248 1.7E-48 T 17-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BJD13_15150 a7d8c61fa42bdcf25f0c2df0c2883332 273 TIGRFAM TIGR00861 MIP: MIP family channel proteins 14 248 8.5E-59 T 17-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BJD13_15150 a7d8c61fa42bdcf25f0c2df0c2883332 273 SUPERFAMILY SSF81338 5 253 1.96E-63 T 17-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 BJD13_15150 a7d8c61fa42bdcf25f0c2df0c2883332 273 Gene3D G3DSA:1.20.1080.10 1 256 2.6E-77 T 17-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 BJD13_15150 a7d8c61fa42bdcf25f0c2df0c2883332 273 ProSitePatterns PS00221 MIP family signature. 67 75 - T 17-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 BJD13_00100 0cffd21414b074d55a5865daf5ea286d 875 Pfam PF07514 Putative helicase 79 389 4.6E-65 T 17-10-2018 IPR011119 Uncharacterised domain, helicase/relaxase, putative BJD13_00100 0cffd21414b074d55a5865daf5ea286d 875 Gene3D G3DSA:1.10.3210.40 72 302 1.6E-17 T 17-10-2018 BJD13_00100 0cffd21414b074d55a5865daf5ea286d 875 SMART SM00471 130 301 0.0014 T 17-10-2018 IPR003607 HD/PDEase domain BJD13_11805 6c41adadd24d2bdeb4003276a68674fa 208 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 208 34.661 T 17-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 BJD13_11805 6c41adadd24d2bdeb4003276a68674fa 208 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 96 4.4E-31 T 17-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 BJD13_11805 6c41adadd24d2bdeb4003276a68674fa 208 SMART SM00363 97 161 1.5E-16 T 17-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_11805 6c41adadd24d2bdeb4003276a68674fa 208 ProSitePatterns PS00632 Ribosomal protein S4 signature. 95 119 - T 17-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_11805 6c41adadd24d2bdeb4003276a68674fa 208 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 208 4.6E-77 T 17-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 BJD13_11805 6c41adadd24d2bdeb4003276a68674fa 208 SMART SM01390 3 96 6.4E-48 T 17-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 BJD13_11805 6c41adadd24d2bdeb4003276a68674fa 208 Gene3D G3DSA:3.10.290.10 96 193 6.4E-78 T 17-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 BJD13_11805 6c41adadd24d2bdeb4003276a68674fa 208 Gene3D G3DSA:1.10.1050.10 6 208 6.4E-78 T 17-10-2018 BJD13_11805 6c41adadd24d2bdeb4003276a68674fa 208 SUPERFAMILY SSF55174 2 208 6.15E-65 T 17-10-2018 BJD13_11805 6c41adadd24d2bdeb4003276a68674fa 208 Pfam PF01479 S4 domain 98 144 6.2E-18 T 17-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_09065 5f30ec9441003b7125319ba29efc4fb5 167 Hamap MF_00023 SsrA-binding protein [smpB]. 1 166 68.409 T 17-10-2018 IPR000037 SsrA-binding protein GO:0003723 BJD13_09065 5f30ec9441003b7125319ba29efc4fb5 167 ProSitePatterns PS01317 SsrA-binding protein. 37 49 - T 17-10-2018 IPR020081 SsrA-binding protein, conserved site BJD13_09065 5f30ec9441003b7125319ba29efc4fb5 167 Gene3D G3DSA:2.40.280.10 12 139 6.4E-44 T 17-10-2018 IPR023620 Small protein B BJD13_09065 5f30ec9441003b7125319ba29efc4fb5 167 Pfam PF01668 SmpB protein 19 161 3.2E-56 T 17-10-2018 IPR000037 SsrA-binding protein GO:0003723 BJD13_09065 5f30ec9441003b7125319ba29efc4fb5 167 TIGRFAM TIGR00086 smpB: SsrA-binding protein 19 160 1.7E-51 T 17-10-2018 IPR000037 SsrA-binding protein GO:0003723 BJD13_09065 5f30ec9441003b7125319ba29efc4fb5 167 SUPERFAMILY SSF74982 14 143 5.1E-48 T 17-10-2018 IPR023620 Small protein B BJD13_09065 5f30ec9441003b7125319ba29efc4fb5 167 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 19 143 1.0E-67 T 17-10-2018 IPR000037 SsrA-binding protein GO:0003723 BJD13_03810 0b81c465e467eff61c0c7fbc17063a07 938 Pfam PF00593 TonB dependent receptor 363 936 1.5E-35 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_03810 0b81c465e467eff61c0c7fbc17063a07 938 Gene3D G3DSA:2.170.130.10 47 186 2.2E-35 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_03810 0b81c465e467eff61c0c7fbc17063a07 938 SUPERFAMILY SSF56935 45 938 8.85E-80 T 17-10-2018 BJD13_03810 0b81c465e467eff61c0c7fbc17063a07 938 Pfam PF07715 TonB-dependent Receptor Plug Domain 67 182 6.5E-23 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_22465 02e4bf7f9e06dd598d2e4a2c72eea4f3 398 Gene3D G3DSA:3.30.565.10 250 396 1.9E-31 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_22465 02e4bf7f9e06dd598d2e4a2c72eea4f3 398 PRINTS PR00344 Bacterial sensor protein C-terminal signature 346 356 1.3E-8 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_22465 02e4bf7f9e06dd598d2e4a2c72eea4f3 398 PRINTS PR00344 Bacterial sensor protein C-terminal signature 328 342 1.3E-8 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_22465 02e4bf7f9e06dd598d2e4a2c72eea4f3 398 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 396 1.3E-8 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_22465 02e4bf7f9e06dd598d2e4a2c72eea4f3 398 PRINTS PR00344 Bacterial sensor protein C-terminal signature 359 377 1.3E-8 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_22465 02e4bf7f9e06dd598d2e4a2c72eea4f3 398 Pfam PF01590 GAF domain 39 167 1.7E-7 T 17-10-2018 IPR003018 GAF domain GO:0005515 BJD13_22465 02e4bf7f9e06dd598d2e4a2c72eea4f3 398 SMART SM00387 292 398 1.9E-21 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_22465 02e4bf7f9e06dd598d2e4a2c72eea4f3 398 SMART SM00065 38 180 1.1E-6 T 17-10-2018 IPR003018 GAF domain GO:0005515 BJD13_22465 02e4bf7f9e06dd598d2e4a2c72eea4f3 398 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 295 397 2.0E-17 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_22465 02e4bf7f9e06dd598d2e4a2c72eea4f3 398 Gene3D G3DSA:1.10.287.130 190 249 1.9E-31 T 17-10-2018 BJD13_22465 02e4bf7f9e06dd598d2e4a2c72eea4f3 398 Gene3D G3DSA:3.30.450.40 26 183 2.5E-17 T 17-10-2018 IPR029016 GAF-like domain superfamily BJD13_22465 02e4bf7f9e06dd598d2e4a2c72eea4f3 398 SUPERFAMILY SSF47384 171 218 3.53E-6 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD13_22465 02e4bf7f9e06dd598d2e4a2c72eea4f3 398 SUPERFAMILY SSF55781 40 178 1.82E-23 T 17-10-2018 BJD13_22465 02e4bf7f9e06dd598d2e4a2c72eea4f3 398 SUPERFAMILY SSF55874 253 397 2.36E-32 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_03935 e077a4855c01c5c427f5070b0f33d6e8 381 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 6 371 5.7E-156 T 17-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 BJD13_03935 e077a4855c01c5c427f5070b0f33d6e8 381 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 4 368 55.82 T 17-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 BJD13_03935 e077a4855c01c5c427f5070b0f33d6e8 381 Pfam PF01702 Queuine tRNA-ribosyltransferase 129 365 6.3E-87 T 17-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 BJD13_03935 e077a4855c01c5c427f5070b0f33d6e8 381 SUPERFAMILY SSF51713 3 368 1.57E-153 T 17-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 BJD13_03935 e077a4855c01c5c427f5070b0f33d6e8 381 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 6 371 2.5E-150 T 17-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 BJD13_03935 e077a4855c01c5c427f5070b0f33d6e8 381 Gene3D G3DSA:3.20.20.105 1 371 5.1E-159 T 17-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 BJD13_05515 0926e3a304e170707bdf5dc30c26defb 1222 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 10 420 4.8E-163 T 17-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 BJD13_05515 0926e3a304e170707bdf5dc30c26defb 1222 Pfam PF00575 S1 RNA binding domain 33 114 3.4E-12 T 17-10-2018 IPR003029 S1 domain GO:0003676 BJD13_05515 0926e3a304e170707bdf5dc30c26defb 1222 Pfam PF10150 Ribonuclease E/G family 117 386 8.0E-96 T 17-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 BJD13_05515 0926e3a304e170707bdf5dc30c26defb 1222 Gene3D G3DSA:3.40.1260.20 396 501 2.6E-34 T 17-10-2018 BJD13_05515 0926e3a304e170707bdf5dc30c26defb 1222 Hamap MF_00970 Ribonuclease E [rne]. 1 1121 35.433 T 17-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 BJD13_05515 0926e3a304e170707bdf5dc30c26defb 1222 Gene3D G3DSA:2.40.50.140 28 121 5.1E-32 T 17-10-2018 BJD13_05515 0926e3a304e170707bdf5dc30c26defb 1222 SMART SM00316 34 115 3.0E-10 T 17-10-2018 IPR022967 RNA-binding domain, S1 BJD13_05515 0926e3a304e170707bdf5dc30c26defb 1222 SUPERFAMILY SSF50249 37 121 3.23E-18 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD13_06040 60395c52199280036ea594d88ed5625b 340 SUPERFAMILY SSF47384 113 183 1.43E-7 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD13_06040 60395c52199280036ea594d88ed5625b 340 SMART SM00387 225 335 1.3E-28 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_06040 60395c52199280036ea594d88ed5625b 340 PRINTS PR00344 Bacterial sensor protein C-terminal signature 266 280 1.4E-12 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_06040 60395c52199280036ea594d88ed5625b 340 PRINTS PR00344 Bacterial sensor protein C-terminal signature 284 294 1.4E-12 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_06040 60395c52199280036ea594d88ed5625b 340 PRINTS PR00344 Bacterial sensor protein C-terminal signature 295 313 1.4E-12 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_06040 60395c52199280036ea594d88ed5625b 340 PRINTS PR00344 Bacterial sensor protein C-terminal signature 319 332 1.4E-12 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_06040 60395c52199280036ea594d88ed5625b 340 Pfam PF00512 His Kinase A (phospho-acceptor) domain 113 182 3.4E-9 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_06040 60395c52199280036ea594d88ed5625b 340 SMART SM00388 113 183 5.9E-9 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_06040 60395c52199280036ea594d88ed5625b 340 Gene3D G3DSA:3.30.565.10 182 339 8.6E-38 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_06040 60395c52199280036ea594d88ed5625b 340 Gene3D G3DSA:1.10.287.130 118 180 2.7E-18 T 17-10-2018 BJD13_06040 60395c52199280036ea594d88ed5625b 340 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 226 333 4.0E-17 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_06040 60395c52199280036ea594d88ed5625b 340 SUPERFAMILY SSF55874 174 336 6.9E-35 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_01725 708e5f7cf30ab2bf7cbbe1388945e79d 338 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 6 222 3.8E-41 T 17-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 BJD13_01725 708e5f7cf30ab2bf7cbbe1388945e79d 338 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 326 4.6E-93 T 17-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 BJD13_09510 8631c232ad9c2b3a02b5ce4c42837913 337 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 103 136 3.7E-5 T 17-10-2018 IPR001451 Hexapeptide repeat BJD13_09510 8631c232ad9c2b3a02b5ce4c42837913 337 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 139 178 4.3E-4 T 17-10-2018 IPR001451 Hexapeptide repeat BJD13_09510 8631c232ad9c2b3a02b5ce4c42837913 337 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 221 256 7.5E-6 T 17-10-2018 IPR001451 Hexapeptide repeat BJD13_09510 8631c232ad9c2b3a02b5ce4c42837913 337 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 328 7.0E-126 T 17-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 BJD13_09510 8631c232ad9c2b3a02b5ce4c42837913 337 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 8 325 36.161 T 17-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 BJD13_09510 8631c232ad9c2b3a02b5ce4c42837913 337 Gene3D G3DSA:2.160.10.10 98 308 5.7E-61 T 17-10-2018 BJD13_09510 8631c232ad9c2b3a02b5ce4c42837913 337 Gene3D G3DSA:3.40.1390.10 1 96 4.3E-30 T 17-10-2018 BJD13_09510 8631c232ad9c2b3a02b5ce4c42837913 337 SUPERFAMILY SSF51161 32 316 3.82E-78 T 17-10-2018 IPR011004 Trimeric LpxA-like superfamily BJD13_09510 8631c232ad9c2b3a02b5ce4c42837913 337 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 23 88 1.1E-23 T 17-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 BJD13_11035 5ea7e805f68c674b72f63e5e74461500 298 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 7 295 47.984 T 17-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 BJD13_11035 5ea7e805f68c674b72f63e5e74461500 298 ProSitePatterns PS00161 Isocitrate lyase signature. 124 129 - T 17-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 BJD13_11035 5ea7e805f68c674b72f63e5e74461500 298 Pfam PF13714 Phosphoenolpyruvate phosphomutase 13 257 1.1E-47 T 17-10-2018 BJD13_11035 5ea7e805f68c674b72f63e5e74461500 298 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 10 294 3.6E-123 T 17-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 BJD13_11035 5ea7e805f68c674b72f63e5e74461500 298 Gene3D G3DSA:3.20.20.60 7 298 3.4E-100 T 17-10-2018 BJD13_11035 5ea7e805f68c674b72f63e5e74461500 298 SUPERFAMILY SSF51621 8 293 5.38E-98 T 17-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 BJD13_07295 6e8bff07d6bd803cfb0eb24216caa360 307 Pfam PF06445 GyrI-like small molecule binding domain 148 296 2.5E-13 T 17-10-2018 IPR029442 GyrI-like small molecule binding domain BJD13_07295 6e8bff07d6bd803cfb0eb24216caa360 307 Pfam PF12833 Helix-turn-helix domain 35 111 3.7E-21 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD13_07295 6e8bff07d6bd803cfb0eb24216caa360 307 Gene3D G3DSA:1.10.10.60 69 116 1.7E-10 T 17-10-2018 BJD13_07295 6e8bff07d6bd803cfb0eb24216caa360 307 SMART SM00342 29 113 1.7E-24 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD13_07295 6e8bff07d6bd803cfb0eb24216caa360 307 SUPERFAMILY SSF46689 14 63 1.12E-9 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_07295 6e8bff07d6bd803cfb0eb24216caa360 307 SMART SM00871 146 297 3.0E-16 T 17-10-2018 IPR010499 Bacterial transcription activator, effector binding BJD13_07295 6e8bff07d6bd803cfb0eb24216caa360 307 SUPERFAMILY SSF55136 148 297 3.92E-18 T 17-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily BJD13_07295 6e8bff07d6bd803cfb0eb24216caa360 307 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 66 109 - T 17-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 BJD13_07295 6e8bff07d6bd803cfb0eb24216caa360 307 SUPERFAMILY SSF46689 66 112 8.06E-8 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_07295 6e8bff07d6bd803cfb0eb24216caa360 307 Gene3D G3DSA:3.20.80.10 146 298 1.1E-22 T 17-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily BJD13_07295 6e8bff07d6bd803cfb0eb24216caa360 307 Gene3D G3DSA:1.10.10.60 11 68 1.4E-13 T 17-10-2018 BJD13_18560 e2fb858da31bd003f168e623e8eb42ce 249 SUPERFAMILY SSF69593 11 245 5.1E-56 T 17-10-2018 BJD13_18560 e2fb858da31bd003f168e623e8eb42ce 249 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 65 192 7.9E-35 T 17-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 BJD13_18560 e2fb858da31bd003f168e623e8eb42ce 249 Pfam PF01553 Acyltransferase 67 192 7.8E-30 T 17-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 BJD13_18560 e2fb858da31bd003f168e623e8eb42ce 249 SMART SM00563 81 195 5.0E-39 T 17-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 BJD13_06690 f63e1ac2dee86d62b74f8c563d6e4477 208 Gene3D G3DSA:1.10.287.500 120 165 8.9E-9 T 17-10-2018 BJD13_06690 f63e1ac2dee86d62b74f8c563d6e4477 208 Gene3D G3DSA:1.10.287.500 63 119 6.7E-10 T 17-10-2018 BJD13_06690 f63e1ac2dee86d62b74f8c563d6e4477 208 PIRSF PIRSF002884 123 208 7.8E-26 T 17-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 BJD13_06690 f63e1ac2dee86d62b74f8c563d6e4477 208 PIRSF PIRSF002884 24 127 1.0E-27 T 17-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 BJD13_06690 f63e1ac2dee86d62b74f8c563d6e4477 208 SUPERFAMILY SSF75708 38 207 6.15E-38 T 17-10-2018 BJD13_06690 f63e1ac2dee86d62b74f8c563d6e4477 208 Pfam PF04344 Chemotaxis phosphatase, CheZ 125 207 1.2E-13 T 17-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 BJD13_06690 f63e1ac2dee86d62b74f8c563d6e4477 208 Pfam PF04344 Chemotaxis phosphatase, CheZ 48 113 5.6E-11 T 17-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 BJD13_03030 67a39f2b0c2b1c559ce8f5a1196c9aab 642 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 599 641 1.6E-14 T 17-10-2018 IPR020011 Motility protein FimV, C-terminal BJD13_03030 67a39f2b0c2b1c559ce8f5a1196c9aab 642 Gene3D G3DSA:1.20.58.2200 588 642 5.6E-12 T 17-10-2018 IPR038440 FimV, C-terminal domain superfamily BJD13_03030 67a39f2b0c2b1c559ce8f5a1196c9aab 642 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 190 263 4.5E-23 T 17-10-2018 IPR020012 Motility protein FimV, N-terminal BJD13_14130 b5a609f220f097f5c7332faf3a46e370 941 Gene3D G3DSA:3.30.460.100 555 796 1.4E-69 T 17-10-2018 BJD13_14130 b5a609f220f097f5c7332faf3a46e370 941 Gene3D G3DSA:3.30.460.100 49 280 6.3E-61 T 17-10-2018 BJD13_14130 b5a609f220f097f5c7332faf3a46e370 941 Pfam PF08335 GlnD PII-uridylyltransferase 810 892 1.8E-5 T 17-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 BJD13_14130 b5a609f220f097f5c7332faf3a46e370 941 Pfam PF08335 GlnD PII-uridylyltransferase 296 434 1.0E-42 T 17-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 BJD13_14130 b5a609f220f097f5c7332faf3a46e370 941 Gene3D G3DSA:1.20.120.330 798 923 6.8E-23 T 17-10-2018 BJD13_14130 b5a609f220f097f5c7332faf3a46e370 941 SUPERFAMILY SSF81301 520 796 8.5E-70 T 17-10-2018 BJD13_14130 b5a609f220f097f5c7332faf3a46e370 941 Gene3D G3DSA:1.20.120.330 284 437 6.3E-54 T 17-10-2018 BJD13_14130 b5a609f220f097f5c7332faf3a46e370 941 Gene3D G3DSA:1.20.120.1510 445 553 1.2E-22 T 17-10-2018 BJD13_14130 b5a609f220f097f5c7332faf3a46e370 941 SUPERFAMILY SSF81593 286 435 1.41E-41 T 17-10-2018 BJD13_14130 b5a609f220f097f5c7332faf3a46e370 941 SUPERFAMILY SSF81593 800 895 2.04E-19 T 17-10-2018 BJD13_14130 b5a609f220f097f5c7332faf3a46e370 941 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 37 936 18.303 T 17-10-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 BJD13_14130 b5a609f220f097f5c7332faf3a46e370 941 SUPERFAMILY SSF81301 29 285 1.08E-66 T 17-10-2018 BJD13_14130 b5a609f220f097f5c7332faf3a46e370 941 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 546 789 1.1E-67 T 17-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 BJD13_14130 b5a609f220f097f5c7332faf3a46e370 941 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 41 275 4.2E-59 T 17-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 BJD13_10865 a377a49bffa15cde3bf67f36297e8078 524 SMART SM00220 210 500 1.3E-6 T 17-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 BJD13_10865 a377a49bffa15cde3bf67f36297e8078 524 Gene3D G3DSA:1.10.510.10 270 519 3.8E-16 T 17-10-2018 BJD13_10865 a377a49bffa15cde3bf67f36297e8078 524 SUPERFAMILY SSF56112 282 506 1.03E-18 T 17-10-2018 IPR011009 Protein kinase-like domain superfamily BJD13_10865 a377a49bffa15cde3bf67f36297e8078 524 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 216 247 - T 17-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 BJD13_10865 a377a49bffa15cde3bf67f36297e8078 524 Pfam PF00069 Protein kinase domain 281 500 1.3E-11 T 17-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 BJD13_16750 c4bb029358dfb5647022a1415fa4938d 393 Gene3D G3DSA:3.40.50.720 16 152 1.4E-18 T 17-10-2018 BJD13_16750 c4bb029358dfb5647022a1415fa4938d 393 SUPERFAMILY SSF51735 19 160 1.37E-14 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_16750 c4bb029358dfb5647022a1415fa4938d 393 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 22 147 2.7E-11 T 17-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 BJD13_16750 c4bb029358dfb5647022a1415fa4938d 393 Gene3D G3DSA:3.30.360.10 156 323 1.8E-6 T 17-10-2018 BJD13_20450 b20871a0c345993aa349bc1c13ff4f17 394 Pfam PF13450 NAD(P)-binding Rossmann-like domain 26 90 3.6E-16 T 17-10-2018 BJD13_20450 b20871a0c345993aa349bc1c13ff4f17 394 SUPERFAMILY SSF51971 22 385 2.0E-51 T 17-10-2018 BJD13_20450 b20871a0c345993aa349bc1c13ff4f17 394 Pfam PF03275 UDP-galactopyranose mutase 169 365 1.1E-84 T 17-10-2018 IPR015899 UDP-galactopyranose mutase, C-terminal GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 BJD13_20450 b20871a0c345993aa349bc1c13ff4f17 394 TIGRFAM TIGR00031 UDP-GALP_mutase: UDP-galactopyranose mutase 22 380 5.8E-122 T 17-10-2018 IPR004379 UDP-galactopyranose mutase GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 BJD13_20450 b20871a0c345993aa349bc1c13ff4f17 394 SUPERFAMILY SSF54373 267 332 1.33E-22 T 17-10-2018 BJD13_20450 b20871a0c345993aa349bc1c13ff4f17 394 Gene3D G3DSA:3.40.50.720 161 321 2.9E-34 T 17-10-2018 BJD13_20450 b20871a0c345993aa349bc1c13ff4f17 394 Gene3D G3DSA:3.40.50.720 322 391 3.1E-20 T 17-10-2018 BJD13_20450 b20871a0c345993aa349bc1c13ff4f17 394 Gene3D G3DSA:3.40.50.720 18 114 4.4E-32 T 17-10-2018 BJD13_16355 ee7186c05cbe503a82eadf58ca46b0fa 400 Pfam PF13391 HNH endonuclease 43 106 2.8E-5 T 17-10-2018 IPR003615 HNH nuclease BJD13_08215 b97761c46ea982874375912416bed84b 441 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 232 242 - T 17-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site BJD13_08215 b97761c46ea982874375912416bed84b 441 Gene3D G3DSA:3.40.50.200 140 435 1.1E-59 T 17-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BJD13_08215 b97761c46ea982874375912416bed84b 441 SUPERFAMILY SSF52743 169 432 4.84E-57 T 17-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BJD13_08215 b97761c46ea982874375912416bed84b 441 PRINTS PR00723 Subtilisin serine protease family (S8) signature 190 209 4.1E-19 T 17-10-2018 IPR015500 Peptidase S8, subtilisin-related BJD13_08215 b97761c46ea982874375912416bed84b 441 PRINTS PR00723 Subtilisin serine protease family (S8) signature 228 241 4.1E-19 T 17-10-2018 IPR015500 Peptidase S8, subtilisin-related BJD13_08215 b97761c46ea982874375912416bed84b 441 PRINTS PR00723 Subtilisin serine protease family (S8) signature 379 395 4.1E-19 T 17-10-2018 IPR015500 Peptidase S8, subtilisin-related BJD13_08215 b97761c46ea982874375912416bed84b 441 Pfam PF00082 Subtilase family 190 417 7.5E-26 T 17-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 BJD13_08215 b97761c46ea982874375912416bed84b 441 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 195 206 - T 17-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site BJD13_04550 b10e520f0a28590f0615aa2ea574b6f4 393 SUPERFAMILY SSF51126 72 392 4.0E-50 T 17-10-2018 IPR011050 Pectin lyase fold/virulence factor BJD13_04550 b10e520f0a28590f0615aa2ea574b6f4 393 Pfam PF01095 Pectinesterase 76 325 7.7E-27 T 17-10-2018 IPR000070 Pectinesterase, catalytic GO:0005618|GO:0030599|GO:0042545 KEGG: 00040+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248 BJD13_04550 b10e520f0a28590f0615aa2ea574b6f4 393 Gene3D G3DSA:2.160.20.10 17 393 2.7E-110 T 17-10-2018 IPR012334 Pectin lyase fold BJD13_04550 b10e520f0a28590f0615aa2ea574b6f4 393 ProSitePatterns PS00503 Pectinesterase signature 2. 251 260 - T 17-10-2018 IPR033131 Pectinesterase, Asp active site KEGG: 00040+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248 BJD13_19030 83c1ca66744f876bf3fb14fc99279654 44 Pfam PF08085 Entericidin EcnA/B family 22 42 5.0E-9 T 17-10-2018 IPR012556 Entericidin A/B GO:0009636|GO:0016020 BJD13_00740 807fef310d40973abc4124fbab593f9b 288 Gene3D G3DSA:3.40.50.300 1 286 2.3E-47 T 17-10-2018 BJD13_00740 807fef310d40973abc4124fbab593f9b 288 Pfam PF13614 AAA domain 2 194 1.8E-25 T 17-10-2018 IPR025669 AAA domain BJD13_00740 807fef310d40973abc4124fbab593f9b 288 SUPERFAMILY SSF52540 2 282 4.48E-32 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_11870 2be04198d5cfce536bb997649791458f 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 17-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_11870 2be04198d5cfce536bb997649791458f 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 3.9E-59 T 17-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 BJD13_11870 2be04198d5cfce536bb997649791458f 122 SMART SM01374 1 122 2.2E-88 T 17-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 BJD13_11870 2be04198d5cfce536bb997649791458f 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 27.363 T 17-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 BJD13_11870 2be04198d5cfce536bb997649791458f 122 SUPERFAMILY SSF50193 1 122 2.49E-53 T 17-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 BJD13_11870 2be04198d5cfce536bb997649791458f 122 Gene3D G3DSA:2.40.150.20 1 122 4.2E-56 T 17-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 BJD13_11870 2be04198d5cfce536bb997649791458f 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 1.0E-56 T 17-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 BJD13_17160 abfed624c751df45ea7029d5abb3734c 220 Pfam PF05494 MlaC protein 45 206 1.7E-39 T 17-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC BJD13_17160 abfed624c751df45ea7029d5abb3734c 220 Gene3D G3DSA:3.10.450.710 34 210 7.3E-37 T 17-10-2018 BJD13_17160 abfed624c751df45ea7029d5abb3734c 220 PIRSF PIRSF004649 9 219 1.4E-57 T 17-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC BJD13_14580 0264c9e0c7de21c107bb74fe5d29b7be 168 PIRSF PIRSF019239 8 168 3.2E-38 T 17-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 BJD13_14580 0264c9e0c7de21c107bb74fe5d29b7be 168 Pfam PF01899 Na+/H+ ion antiporter subunit 19 166 1.0E-41 T 17-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 BJD13_12100 c2097ca3738d884b24c6c98d0d168f82 88 SUPERFAMILY SSF54975 1 86 2.83E-24 T 17-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 BJD13_12100 c2097ca3738d884b24c6c98d0d168f82 88 Gene3D G3DSA:3.30.70.100 1 87 5.3E-25 T 17-10-2018 BJD13_12100 c2097ca3738d884b24c6c98d0d168f82 88 Pfam PF00708 Acylphosphatase 5 85 3.2E-20 T 17-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 BJD13_06890 218e761d181756273e98f533075fcccf 889 Gene3D G3DSA:3.30.450.20 407 526 1.6E-34 T 17-10-2018 BJD13_06890 218e761d181756273e98f533075fcccf 889 Gene3D G3DSA:1.20.1480.50 308 405 3.5E-10 T 17-10-2018 BJD13_06890 218e761d181756273e98f533075fcccf 889 SMART SM00304 349 401 0.0028 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_06890 218e761d181756273e98f533075fcccf 889 SMART SM00304 524 577 90.0 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_06890 218e761d181756273e98f533075fcccf 889 SMART SM00304 622 675 27.0 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_06890 218e761d181756273e98f533075fcccf 889 Gene3D G3DSA:1.10.287.950 573 872 3.7E-82 T 17-10-2018 BJD13_06890 218e761d181756273e98f533075fcccf 889 Pfam PF17201 Cache 3/Cache 2 fusion domain 34 325 2.2E-76 T 17-10-2018 IPR033462 Cache 3/Cache 2 fusion domain BJD13_06890 218e761d181756273e98f533075fcccf 889 SUPERFAMILY SSF58104 590 871 1.18E-70 T 17-10-2018 BJD13_06890 218e761d181756273e98f533075fcccf 889 SUPERFAMILY SSF103190 115 212 9.81E-13 T 17-10-2018 IPR029151 Periplasmic sensor-like domain superfamily BJD13_06890 218e761d181756273e98f533075fcccf 889 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 685 837 2.2E-51 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD13_06890 218e761d181756273e98f533075fcccf 889 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 644 673 7.6E-58 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD13_06890 218e761d181756273e98f533075fcccf 889 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 721 748 7.6E-58 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD13_06890 218e761d181756273e98f533075fcccf 889 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 410 425 7.6E-58 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD13_06890 218e761d181756273e98f533075fcccf 889 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 750 779 7.6E-58 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD13_06890 218e761d181756273e98f533075fcccf 889 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 798 827 7.6E-58 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD13_06890 218e761d181756273e98f533075fcccf 889 SMART SM00283 623 870 3.4E-87 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD13_06890 218e761d181756273e98f533075fcccf 889 SUPERFAMILY SSF158472 350 398 2.62E-7 T 17-10-2018 BJD13_15405 81a648fdf805f124092b982e4ac692d1 283 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 2 282 48.24 T 17-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 BJD13_15405 81a648fdf805f124092b982e4ac692d1 283 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 6 282 3.7E-101 T 17-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 BJD13_15405 81a648fdf805f124092b982e4ac692d1 283 SUPERFAMILY SSF53328 88 283 2.75E-62 T 17-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BJD13_15405 81a648fdf805f124092b982e4ac692d1 283 Gene3D G3DSA:3.40.50.170 87 282 7.3E-71 T 17-10-2018 BJD13_15405 81a648fdf805f124092b982e4ac692d1 283 Pfam PF01842 ACT domain 5 66 1.6E-7 T 17-10-2018 IPR002912 ACT domain BJD13_15405 81a648fdf805f124092b982e4ac692d1 283 Pfam PF00551 Formyl transferase 88 264 2.9E-39 T 17-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BJD13_15405 81a648fdf805f124092b982e4ac692d1 283 PIRSF PIRSF036480 2 283 2.6E-112 T 17-10-2018 BJD13_15405 81a648fdf805f124092b982e4ac692d1 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 7 33 1.4E-51 T 17-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 BJD13_15405 81a648fdf805f124092b982e4ac692d1 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 88 110 1.4E-51 T 17-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 BJD13_15405 81a648fdf805f124092b982e4ac692d1 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 234 256 1.4E-51 T 17-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 BJD13_15405 81a648fdf805f124092b982e4ac692d1 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 110 137 1.4E-51 T 17-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 BJD13_15405 81a648fdf805f124092b982e4ac692d1 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 39 51 1.4E-51 T 17-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 BJD13_15405 81a648fdf805f124092b982e4ac692d1 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 256 281 1.4E-51 T 17-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 BJD13_15405 81a648fdf805f124092b982e4ac692d1 283 Gene3D G3DSA:3.30.70.260 1 86 7.4E-31 T 17-10-2018 BJD13_15405 81a648fdf805f124092b982e4ac692d1 283 SUPERFAMILY SSF55021 5 83 6.66E-20 T 17-10-2018 BJD13_18215 94ee1b1206917fcee2130d61b72f680f 1070 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1055 0.0 T 17-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 BJD13_18215 94ee1b1206917fcee2130d61b72f680f 1070 Gene3D G3DSA:1.20.1640.10 16 515 3.0E-288 T 17-10-2018 BJD13_18215 94ee1b1206917fcee2130d61b72f680f 1070 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.3E-22 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_18215 94ee1b1206917fcee2130d61b72f680f 1070 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 1.3E-22 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_18215 94ee1b1206917fcee2130d61b72f680f 1070 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 1.3E-22 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_18215 94ee1b1206917fcee2130d61b72f680f 1070 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 1.3E-22 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_18215 94ee1b1206917fcee2130d61b72f680f 1070 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 1.3E-22 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_18215 94ee1b1206917fcee2130d61b72f680f 1070 PRINTS PR00702 Acriflavin resistance protein family signature 480 503 1.3E-22 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_18215 94ee1b1206917fcee2130d61b72f680f 1070 Gene3D G3DSA:3.30.70.1320 135 333 3.0E-288 T 17-10-2018 BJD13_18215 94ee1b1206917fcee2130d61b72f680f 1070 SUPERFAMILY SSF82866 828 1054 2.49E-55 T 17-10-2018 BJD13_18215 94ee1b1206917fcee2130d61b72f680f 1070 Pfam PF00873 AcrB/AcrD/AcrF family 5 1051 0.0 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_18215 94ee1b1206917fcee2130d61b72f680f 1070 Gene3D G3DSA:3.30.70.1430 570 674 3.0E-288 T 17-10-2018 BJD13_18215 94ee1b1206917fcee2130d61b72f680f 1070 SUPERFAMILY SSF82866 304 506 2.09E-31 T 17-10-2018 BJD13_18215 94ee1b1206917fcee2130d61b72f680f 1070 Gene3D G3DSA:3.30.70.1430 42 842 3.0E-288 T 17-10-2018 BJD13_18215 94ee1b1206917fcee2130d61b72f680f 1070 Gene3D G3DSA:3.30.2090.10 189 280 3.0E-288 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_18215 94ee1b1206917fcee2130d61b72f680f 1070 Gene3D G3DSA:1.20.1640.10 516 1047 3.0E-288 T 17-10-2018 BJD13_18215 94ee1b1206917fcee2130d61b72f680f 1070 Gene3D G3DSA:3.30.70.1440 675 892 3.0E-288 T 17-10-2018 BJD13_18215 94ee1b1206917fcee2130d61b72f680f 1070 SUPERFAMILY SSF82714 725 796 4.32E-12 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_18215 94ee1b1206917fcee2130d61b72f680f 1070 SUPERFAMILY SSF82714 192 274 5.75E-17 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_18215 94ee1b1206917fcee2130d61b72f680f 1070 SUPERFAMILY SSF82693 156 333 2.75E-18 T 17-10-2018 BJD13_18215 94ee1b1206917fcee2130d61b72f680f 1070 SUPERFAMILY SSF82693 42 128 1.26E-22 T 17-10-2018 BJD13_18215 94ee1b1206917fcee2130d61b72f680f 1070 Gene3D G3DSA:3.30.2090.10 726 834 3.0E-288 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_16290 4b3375584074e9a7ec22fc1aba00778b 1116 SMART SM00642 30 430 2.4E-107 T 17-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BJD13_16290 4b3375584074e9a7ec22fc1aba00778b 1116 TIGRFAM TIGR02457 TreS_Cterm: putative maltokinase 575 1106 1.5E-218 T 17-10-2018 IPR012811 Trehalose synthase/probable maltokinase, C-terminal domain BJD13_16290 4b3375584074e9a7ec22fc1aba00778b 1116 SUPERFAMILY SSF56112 733 1060 1.36E-13 T 17-10-2018 IPR011009 Protein kinase-like domain superfamily BJD13_16290 4b3375584074e9a7ec22fc1aba00778b 1116 SUPERFAMILY SSF51011 482 558 2.34E-17 T 17-10-2018 BJD13_16290 4b3375584074e9a7ec22fc1aba00778b 1116 Gene3D G3DSA:2.60.40.1180 478 566 1.9E-28 T 17-10-2018 IPR013780 Glycosyl hydrolase, all-beta BJD13_16290 4b3375584074e9a7ec22fc1aba00778b 1116 Pfam PF00128 Alpha amylase, catalytic domain 45 399 9.6E-76 T 17-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BJD13_16290 4b3375584074e9a7ec22fc1aba00778b 1116 Pfam PF16657 Maltogenic Amylase, C-terminal domain 478 554 2.1E-26 T 17-10-2018 IPR032091 Maltogenic Amylase, C-terminal BJD13_16290 4b3375584074e9a7ec22fc1aba00778b 1116 Gene3D G3DSA:3.90.400.10 120 190 4.3E-220 T 17-10-2018 BJD13_16290 4b3375584074e9a7ec22fc1aba00778b 1116 Gene3D G3DSA:3.90.1200.10 822 1115 1.3E-53 T 17-10-2018 BJD13_16290 4b3375584074e9a7ec22fc1aba00778b 1116 Gene3D G3DSA:3.20.20.80 21 472 4.3E-220 T 17-10-2018 BJD13_16290 4b3375584074e9a7ec22fc1aba00778b 1116 TIGRFAM TIGR02456 treS_nterm: trehalose synthase 21 558 1.1E-300 T 17-10-2018 IPR012810 Trehalose synthase/alpha-amylase, N-terminal GO:0003824|GO:0005975 KEGG: 00500+5.4.99.16|MetaCyc: PWY-2622|MetaCyc: PWY-7900 BJD13_16290 4b3375584074e9a7ec22fc1aba00778b 1116 SUPERFAMILY SSF51445 34 478 4.36E-132 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily BJD13_21130 83bd38ff5e2a4fe08cc8db844c9837a8 398 Gene3D G3DSA:3.40.640.10 15 261 2.8E-102 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD13_21130 83bd38ff5e2a4fe08cc8db844c9837a8 398 SUPERFAMILY SSF53383 20 394 5.3E-127 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD13_21130 83bd38ff5e2a4fe08cc8db844c9837a8 398 PIRSF PIRSF001434 3 396 9.9E-150 T 17-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 BJD13_21130 83bd38ff5e2a4fe08cc8db844c9837a8 398 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 18 394 7.6E-161 T 17-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 BJD13_21130 83bd38ff5e2a4fe08cc8db844c9837a8 398 Gene3D G3DSA:3.90.1150.10 262 396 1.6E-60 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD13_21130 83bd38ff5e2a4fe08cc8db844c9837a8 398 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 202 216 - T 17-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 BJD13_16835 ea2c7d515db7301731856dc1eefcd14c 357 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 167 176 - T 17-10-2018 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 BJD13_16835 ea2c7d515db7301731856dc1eefcd14c 357 SUPERFAMILY SSF51445 43 346 4.16E-80 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily BJD13_16835 ea2c7d515db7301731856dc1eefcd14c 357 Gene3D G3DSA:3.20.20.80 41 352 2.2E-107 T 17-10-2018 BJD13_16835 ea2c7d515db7301731856dc1eefcd14c 357 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 47 321 2.7E-53 T 17-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 BJD13_06240 10ffb9406244f13436ae0a009d3a2301 141 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 35.345 T 17-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BJD13_06240 10ffb9406244f13436ae0a009d3a2301 141 SUPERFAMILY SSF54919 1 140 2.23E-55 T 17-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BJD13_06240 10ffb9406244f13436ae0a009d3a2301 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 5.8E-41 T 17-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BJD13_06240 10ffb9406244f13436ae0a009d3a2301 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 5.8E-41 T 17-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BJD13_06240 10ffb9406244f13436ae0a009d3a2301 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 5.8E-41 T 17-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BJD13_06240 10ffb9406244f13436ae0a009d3a2301 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 5.8E-41 T 17-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BJD13_06240 10ffb9406244f13436ae0a009d3a2301 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 5.8E-41 T 17-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BJD13_06240 10ffb9406244f13436ae0a009d3a2301 141 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 17-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BJD13_06240 10ffb9406244f13436ae0a009d3a2301 141 Pfam PF00334 Nucleoside diphosphate kinase 4 137 1.4E-53 T 17-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BJD13_06240 10ffb9406244f13436ae0a009d3a2301 141 Gene3D G3DSA:3.30.70.141 1 141 1.1E-55 T 17-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BJD13_06240 10ffb9406244f13436ae0a009d3a2301 141 SMART SM00562 3 140 1.0E-83 T 17-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BJD13_22060 6f69de1b62c18ca2d7cfdad4296d924e 429 Gene3D G3DSA:3.40.640.10 71 319 3.8E-174 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD13_22060 6f69de1b62c18ca2d7cfdad4296d924e 429 Pfam PF00202 Aminotransferase class-III 35 397 7.0E-77 T 17-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BJD13_22060 6f69de1b62c18ca2d7cfdad4296d924e 429 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 5 427 103.291 T 17-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 BJD13_22060 6f69de1b62c18ca2d7cfdad4296d924e 429 Gene3D G3DSA:3.90.1150.10 9 419 3.8E-174 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD13_22060 6f69de1b62c18ca2d7cfdad4296d924e 429 SUPERFAMILY SSF53383 1 426 2.62E-128 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD13_22060 6f69de1b62c18ca2d7cfdad4296d924e 429 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 6 426 1.3E-187 T 17-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 BJD13_22060 6f69de1b62c18ca2d7cfdad4296d924e 429 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 236 272 - T 17-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BJD13_05135 89c5f1d99ade0f7fd0e183d25ceba769 330 SUPERFAMILY SSF82861 50 133 5.23E-18 T 17-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 BJD13_05135 89c5f1d99ade0f7fd0e183d25ceba769 330 Pfam PF00924 Mechanosensitive ion channel 92 289 7.5E-49 T 17-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 BJD13_05135 89c5f1d99ade0f7fd0e183d25ceba769 330 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 164 198 - T 17-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 BJD13_05135 89c5f1d99ade0f7fd0e183d25ceba769 330 SUPERFAMILY SSF82689 203 299 2.48E-26 T 17-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 BJD13_05135 89c5f1d99ade0f7fd0e183d25ceba769 330 Gene3D G3DSA:3.30.70.100 202 293 1.1E-21 T 17-10-2018 BJD13_05135 89c5f1d99ade0f7fd0e183d25ceba769 330 SUPERFAMILY SSF50182 134 200 3.6E-16 T 17-10-2018 IPR010920 LSM domain superfamily BJD13_05135 89c5f1d99ade0f7fd0e183d25ceba769 330 Gene3D G3DSA:2.30.30.60 150 199 1.5E-14 T 17-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily BJD13_16205 8c33754a3edcdfe65f4b68b85fdd4c1c 296 TIGRFAM TIGR01267 Phe4hydrox_mono: phenylalanine-4-hydroxylase 26 267 2.6E-106 T 17-10-2018 IPR005960 Phenylalanine-4-hydroxylase, monomeric form GO:0004505|GO:0006559|GO:0055114 KEGG: 00360+1.14.16.1|KEGG: 00400+1.14.16.1|KEGG: 00790+1.14.16.1|MetaCyc: PWY-6134|MetaCyc: PWY-7158 BJD13_16205 8c33754a3edcdfe65f4b68b85fdd4c1c 296 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 32 251 1.4E-49 T 17-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 BJD13_16205 8c33754a3edcdfe65f4b68b85fdd4c1c 296 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 195 213 5.4E-13 T 17-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 BJD13_16205 8c33754a3edcdfe65f4b68b85fdd4c1c 296 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 227 246 5.4E-13 T 17-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 BJD13_16205 8c33754a3edcdfe65f4b68b85fdd4c1c 296 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 88 110 5.4E-13 T 17-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 BJD13_16205 8c33754a3edcdfe65f4b68b85fdd4c1c 296 SUPERFAMILY SSF56534 20 292 1.11E-103 T 17-10-2018 IPR036329 Aromatic amino acid monoxygenase, C-terminal domain superfamily BJD13_16205 8c33754a3edcdfe65f4b68b85fdd4c1c 296 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 131 142 - T 17-10-2018 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 BJD13_16205 8c33754a3edcdfe65f4b68b85fdd4c1c 296 Gene3D G3DSA:1.10.800.10 3 296 6.2E-110 T 17-10-2018 IPR036951 Aromatic amino acid hydroxylase superfamily GO:0004497|GO:0005506|GO:0009072|GO:0055114 BJD13_09985 a2502057c398e3e8669b5cab6eecfe0d 226 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 12 221 1.2E-68 T 17-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 BJD13_09985 a2502057c398e3e8669b5cab6eecfe0d 226 Pfam PF00035 Double-stranded RNA binding motif 155 222 7.1E-11 T 17-10-2018 IPR014720 Double-stranded RNA-binding domain BJD13_09985 a2502057c398e3e8669b5cab6eecfe0d 226 ProSitePatterns PS00517 Ribonuclease III family signature. 37 45 - T 17-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 BJD13_09985 a2502057c398e3e8669b5cab6eecfe0d 226 Pfam PF14622 Ribonuclease-III-like 18 138 1.0E-30 T 17-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 BJD13_09985 a2502057c398e3e8669b5cab6eecfe0d 226 Gene3D G3DSA:3.30.160.20 153 224 1.3E-18 T 17-10-2018 BJD13_09985 a2502057c398e3e8669b5cab6eecfe0d 226 Gene3D G3DSA:1.10.1520.10 9 145 9.5E-38 T 17-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 BJD13_09985 a2502057c398e3e8669b5cab6eecfe0d 226 SMART SM00358 155 223 7.0E-19 T 17-10-2018 IPR014720 Double-stranded RNA-binding domain BJD13_09985 a2502057c398e3e8669b5cab6eecfe0d 226 Hamap MF_00104 Ribonuclease 3 [rnc]. 8 219 27.429 T 17-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 BJD13_09985 a2502057c398e3e8669b5cab6eecfe0d 226 SUPERFAMILY SSF54768 108 222 1.15E-25 T 17-10-2018 BJD13_09985 a2502057c398e3e8669b5cab6eecfe0d 226 SMART SM00535 20 148 1.6E-47 T 17-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 BJD13_09985 a2502057c398e3e8669b5cab6eecfe0d 226 SUPERFAMILY SSF69065 11 157 3.14E-43 T 17-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 BJD13_02325 90b473b852c55da2729511ad91813928 230 Gene3D G3DSA:1.10.10.10 131 230 4.6E-24 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_02325 90b473b852c55da2729511ad91813928 230 SUPERFAMILY SSF46894 136 229 9.35E-23 T 17-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BJD13_02325 90b473b852c55da2729511ad91813928 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 228 1.1E-20 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD13_02325 90b473b852c55da2729511ad91813928 230 Pfam PF00072 Response regulator receiver domain 8 117 6.0E-24 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_02325 90b473b852c55da2729511ad91813928 230 Gene3D G3DSA:3.40.50.2300 1 125 4.9E-34 T 17-10-2018 BJD13_02325 90b473b852c55da2729511ad91813928 230 SUPERFAMILY SSF52172 4 127 1.01E-39 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_02325 90b473b852c55da2729511ad91813928 230 SMART SM00448 6 116 3.0E-40 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_02325 90b473b852c55da2729511ad91813928 230 SMART SM00862 151 228 1.5E-22 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD13_05955 ea4b543fa36bdae3df15ada8ad16589b 505 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 27 500 7.0E-214 T 17-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath BJD13_05955 ea4b543fa36bdae3df15ada8ad16589b 505 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 76 500 5.1E-189 T 17-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath BJD13_21200 a671480af39552a21786e42ad2e28f69 295 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 5 289 2.7E-155 T 17-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 BJD13_21200 a671480af39552a21786e42ad2e28f69 295 SUPERFAMILY SSF53448 5 288 1.82E-89 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD13_21200 a671480af39552a21786e42ad2e28f69 295 Pfam PF00483 Nucleotidyl transferase 6 241 7.9E-72 T 17-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 BJD13_21200 a671480af39552a21786e42ad2e28f69 295 Gene3D G3DSA:3.90.550.10 2 294 6.0E-83 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD13_02340 403e3f269018bda98cf4fbf79e64e5c7 270 SMART SM00645 53 267 3.0E-5 T 17-10-2018 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 BJD13_02340 403e3f269018bda98cf4fbf79e64e5c7 270 Pfam PF00112 Papain family cysteine protease 54 256 1.0E-13 T 17-10-2018 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 BJD13_02340 403e3f269018bda98cf4fbf79e64e5c7 270 SUPERFAMILY SSF54001 42 258 7.72E-37 T 17-10-2018 IPR038765 Papain-like cysteine peptidase superfamily BJD13_02340 403e3f269018bda98cf4fbf79e64e5c7 270 Gene3D G3DSA:3.90.70.10 23 270 5.7E-40 T 17-10-2018 BJD13_05060 91c9c5e36dd832cecf886b674d2fdd81 375 SUPERFAMILY SSF158472 318 365 8.63E-8 T 17-10-2018 BJD13_05060 91c9c5e36dd832cecf886b674d2fdd81 375 SUPERFAMILY SSF103190 110 209 1.29E-10 T 17-10-2018 IPR029151 Periplasmic sensor-like domain superfamily BJD13_05060 91c9c5e36dd832cecf886b674d2fdd81 375 Pfam PF17201 Cache 3/Cache 2 fusion domain 35 242 2.4E-41 T 17-10-2018 IPR033462 Cache 3/Cache 2 fusion domain BJD13_05060 91c9c5e36dd832cecf886b674d2fdd81 375 Gene3D G3DSA:1.20.1480.50 281 375 7.1E-16 T 17-10-2018 BJD13_05060 91c9c5e36dd832cecf886b674d2fdd81 375 SMART SM00304 317 370 3.4E-6 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_04285 bfce5d90081c19ec2304e370c2433f46 1464 Gene3D G3DSA:3.40.50.300 250 394 5.5E-28 T 17-10-2018 BJD13_04285 bfce5d90081c19ec2304e370c2433f46 1464 Gene3D G3DSA:3.40.50.300 5 226 4.7E-56 T 17-10-2018 BJD13_04285 bfce5d90081c19ec2304e370c2433f46 1464 Pfam PF08494 DEAD/H associated 633 835 2.0E-51 T 17-10-2018 IPR013701 DEAD/H associated GO:0005524|GO:0016818 BJD13_04285 bfce5d90081c19ec2304e370c2433f46 1464 Pfam PF00271 Helicase conserved C-terminal domain 271 370 4.0E-17 T 17-10-2018 IPR001650 Helicase, C-terminal BJD13_04285 bfce5d90081c19ec2304e370c2433f46 1464 Pfam PF00270 DEAD/DEAH box helicase 24 210 5.1E-27 T 17-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BJD13_04285 bfce5d90081c19ec2304e370c2433f46 1464 SMART SM00487 19 236 1.7E-31 T 17-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BJD13_04285 bfce5d90081c19ec2304e370c2433f46 1464 SMART SM00490 290 370 3.1E-17 T 17-10-2018 IPR001650 Helicase, C-terminal BJD13_04285 bfce5d90081c19ec2304e370c2433f46 1464 SUPERFAMILY SSF52540 31 374 1.06E-47 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_15360 7b7fb6fd373561a4fca94170d2cc7b66 304 Gene3D G3DSA:1.10.10.10 1 89 1.7E-22 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_15360 7b7fb6fd373561a4fca94170d2cc7b66 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 8.5E-7 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_15360 7b7fb6fd373561a4fca94170d2cc7b66 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 8.5E-7 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_15360 7b7fb6fd373561a4fca94170d2cc7b66 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 8.5E-7 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_15360 7b7fb6fd373561a4fca94170d2cc7b66 304 Pfam PF03466 LysR substrate binding domain 88 292 4.6E-34 T 17-10-2018 IPR005119 LysR, substrate-binding BJD13_15360 7b7fb6fd373561a4fca94170d2cc7b66 304 Gene3D G3DSA:3.40.190.10 90 291 2.5E-71 T 17-10-2018 BJD13_15360 7b7fb6fd373561a4fca94170d2cc7b66 304 SUPERFAMILY SSF53850 88 296 1.15E-36 T 17-10-2018 BJD13_15360 7b7fb6fd373561a4fca94170d2cc7b66 304 Gene3D G3DSA:3.40.190.10 163 268 2.5E-71 T 17-10-2018 BJD13_15360 7b7fb6fd373561a4fca94170d2cc7b66 304 SUPERFAMILY SSF46785 6 111 6.61E-19 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_15360 7b7fb6fd373561a4fca94170d2cc7b66 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 4.3E-16 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_08605 2a647da1f44d1769130278c4b640ce13 481 SUPERFAMILY SSF53098 2 477 9.02E-117 T 17-10-2018 IPR012337 Ribonuclease H-like superfamily BJD13_08605 2a647da1f44d1769130278c4b640ce13 481 Pfam PF08411 Exonuclease C-terminal 206 475 1.1E-91 T 17-10-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 BJD13_08605 2a647da1f44d1769130278c4b640ce13 481 Gene3D G3DSA:2.30.30.450 208 347 6.5E-40 T 17-10-2018 IPR038649 Exonuclease I, SH3-like domain superfamily BJD13_08605 2a647da1f44d1769130278c4b640ce13 481 PIRSF PIRSF000977 1 481 8.2E-176 T 17-10-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 BJD13_08605 2a647da1f44d1769130278c4b640ce13 481 Gene3D G3DSA:3.30.420.10 2 195 2.4E-64 T 17-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BJD13_08605 2a647da1f44d1769130278c4b640ce13 481 Gene3D G3DSA:1.20.1280.70 357 417 2.4E-23 T 17-10-2018 BJD13_08605 2a647da1f44d1769130278c4b640ce13 481 SMART SM00479 4 197 2.2E-6 T 17-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BJD13_08605 2a647da1f44d1769130278c4b640ce13 481 Pfam PF00929 Exonuclease 7 185 5.2E-23 T 17-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BJD13_19640 ac17786f660ffe8d1e6f09a08165694c 365 Gene3D G3DSA:3.30.390.10 1 355 4.1E-112 T 17-10-2018 IPR029017 Enolase-like, N-terminal BJD13_19640 ac17786f660ffe8d1e6f09a08165694c 365 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 13 124 9.0E-18 T 17-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain BJD13_19640 ac17786f660ffe8d1e6f09a08165694c 365 Pfam PF13378 Enolase C-terminal domain-like 144 355 1.9E-51 T 17-10-2018 IPR029065 Enolase C-terminal domain-like BJD13_19640 ac17786f660ffe8d1e6f09a08165694c 365 SUPERFAMILY SSF54826 1 125 2.83E-31 T 17-10-2018 BJD13_19640 ac17786f660ffe8d1e6f09a08165694c 365 Gene3D G3DSA:3.20.20.120 116 353 4.1E-112 T 17-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily BJD13_19640 ac17786f660ffe8d1e6f09a08165694c 365 SMART SM00922 141 239 3.1E-25 T 17-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal BJD13_19640 ac17786f660ffe8d1e6f09a08165694c 365 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 99 124 - T 17-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 BJD13_19640 ac17786f660ffe8d1e6f09a08165694c 365 SUPERFAMILY SSF51604 112 355 9.3E-68 T 17-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily BJD13_21900 a39958bad5a1acf0833cce617cd9a788 569 Gene3D G3DSA:3.60.20.40 377 569 2.7E-66 T 17-10-2018 BJD13_21900 a39958bad5a1acf0833cce617cd9a788 569 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 42 561 5.8E-119 T 17-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 BJD13_21900 a39958bad5a1acf0833cce617cd9a788 569 Pfam PF01019 Gamma-glutamyltranspeptidase 56 564 1.1E-161 T 17-10-2018 BJD13_21900 a39958bad5a1acf0833cce617cd9a788 569 SUPERFAMILY SSF56235 30 569 3.86E-179 T 17-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BJD13_21900 a39958bad5a1acf0833cce617cd9a788 569 Gene3D G3DSA:1.10.246.130 266 376 1.2E-38 T 17-10-2018 BJD13_21900 a39958bad5a1acf0833cce617cd9a788 569 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 250 266 3.0E-44 T 17-10-2018 BJD13_21900 a39958bad5a1acf0833cce617cd9a788 569 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 377 395 3.0E-44 T 17-10-2018 BJD13_21900 a39958bad5a1acf0833cce617cd9a788 569 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 432 447 3.0E-44 T 17-10-2018 BJD13_21900 a39958bad5a1acf0833cce617cd9a788 569 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 456 473 3.0E-44 T 17-10-2018 BJD13_21900 a39958bad5a1acf0833cce617cd9a788 569 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 63 88 3.0E-44 T 17-10-2018 BJD13_21900 a39958bad5a1acf0833cce617cd9a788 569 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 134 152 3.0E-44 T 17-10-2018 BJD13_21900 a39958bad5a1acf0833cce617cd9a788 569 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 401 419 3.0E-44 T 17-10-2018 BJD13_21900 a39958bad5a1acf0833cce617cd9a788 569 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 152 171 3.0E-44 T 17-10-2018 BJD13_21900 a39958bad5a1acf0833cce617cd9a788 569 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 279 298 3.0E-44 T 17-10-2018 BJD13_22445 f33f4024c899f8c67c4df9c45e4e0206 327 Gene3D G3DSA:3.40.190.10 92 301 1.4E-63 T 17-10-2018 BJD13_22445 f33f4024c899f8c67c4df9c45e4e0206 327 Gene3D G3DSA:1.10.10.10 1 86 3.7E-23 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_22445 f33f4024c899f8c67c4df9c45e4e0206 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 6.8E-8 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_22445 f33f4024c899f8c67c4df9c45e4e0206 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 6.8E-8 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_22445 f33f4024c899f8c67c4df9c45e4e0206 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 6.8E-8 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_22445 f33f4024c899f8c67c4df9c45e4e0206 327 Gene3D G3DSA:3.40.190.10 167 267 1.4E-63 T 17-10-2018 BJD13_22445 f33f4024c899f8c67c4df9c45e4e0206 327 SUPERFAMILY SSF53850 91 297 1.68E-36 T 17-10-2018 BJD13_22445 f33f4024c899f8c67c4df9c45e4e0206 327 SUPERFAMILY SSF46785 1 88 5.69E-16 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_22445 f33f4024c899f8c67c4df9c45e4e0206 327 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 63 3.4E-16 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_22445 f33f4024c899f8c67c4df9c45e4e0206 327 Pfam PF03466 LysR substrate binding domain 89 292 1.2E-38 T 17-10-2018 IPR005119 LysR, substrate-binding BJD13_10345 89ce782662deac814a2767eca06b63f2 666 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 56 504 1.1E-139 T 17-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_10345 89ce782662deac814a2767eca06b63f2 666 Gene3D G3DSA:1.20.210.10 31 565 6.9E-193 T 17-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_10345 89ce782662deac814a2767eca06b63f2 666 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 280 334 - T 17-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_10345 89ce782662deac814a2767eca06b63f2 666 PRINTS PR01165 Cytochrome c oxidase subunit I signature 383 401 1.5E-98 T 17-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_10345 89ce782662deac814a2767eca06b63f2 666 PRINTS PR01165 Cytochrome c oxidase subunit I signature 411 430 1.5E-98 T 17-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_10345 89ce782662deac814a2767eca06b63f2 666 PRINTS PR01165 Cytochrome c oxidase subunit I signature 278 299 1.5E-98 T 17-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_10345 89ce782662deac814a2767eca06b63f2 666 PRINTS PR01165 Cytochrome c oxidase subunit I signature 124 148 1.5E-98 T 17-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_10345 89ce782662deac814a2767eca06b63f2 666 PRINTS PR01165 Cytochrome c oxidase subunit I signature 461 482 1.5E-98 T 17-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_10345 89ce782662deac814a2767eca06b63f2 666 PRINTS PR01165 Cytochrome c oxidase subunit I signature 47 72 1.5E-98 T 17-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_10345 89ce782662deac814a2767eca06b63f2 666 PRINTS PR01165 Cytochrome c oxidase subunit I signature 166 178 1.5E-98 T 17-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_10345 89ce782662deac814a2767eca06b63f2 666 PRINTS PR01165 Cytochrome c oxidase subunit I signature 227 246 1.5E-98 T 17-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_10345 89ce782662deac814a2767eca06b63f2 666 PRINTS PR01165 Cytochrome c oxidase subunit I signature 97 120 1.5E-98 T 17-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_10345 89ce782662deac814a2767eca06b63f2 666 PRINTS PR01165 Cytochrome c oxidase subunit I signature 198 216 1.5E-98 T 17-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_10345 89ce782662deac814a2767eca06b63f2 666 PRINTS PR01165 Cytochrome c oxidase subunit I signature 348 369 1.5E-98 T 17-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_10345 89ce782662deac814a2767eca06b63f2 666 PRINTS PR01165 Cytochrome c oxidase subunit I signature 324 339 1.5E-98 T 17-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_10345 89ce782662deac814a2767eca06b63f2 666 SUPERFAMILY SSF81442 43 559 3.79E-182 T 17-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_10345 89ce782662deac814a2767eca06b63f2 666 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 2 647 0.0 T 17-10-2018 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 BJD13_03090 1292bf23fff1efed967806a144d17fc9 227 Gene3D G3DSA:2.60.40.420 41 139 4.8E-16 T 17-10-2018 IPR008972 Cupredoxin BJD13_03090 1292bf23fff1efed967806a144d17fc9 227 SUPERFAMILY SSF49503 48 139 6.81E-21 T 17-10-2018 IPR008972 Cupredoxin BJD13_03090 1292bf23fff1efed967806a144d17fc9 227 SUPERFAMILY SSF49464 121 178 1.06E-6 T 17-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily BJD13_01790 78ec147647f73aae8df3179708401fee 183 Gene3D G3DSA:2.60.450.10 21 161 2.1E-34 T 17-10-2018 BJD13_01790 78ec147647f73aae8df3179708401fee 183 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 19 158 2.1E-40 T 17-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 BJD13_01790 78ec147647f73aae8df3179708401fee 183 Pfam PF03968 OstA-like protein 31 140 1.4E-25 T 17-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal BJD13_01790 78ec147647f73aae8df3179708401fee 183 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 1 158 23.326 T 17-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 BJD13_02790 0e7ca0cf997685fc3fe2155ade244369 193 Gene3D G3DSA:1.10.60.30 24 98 1.3E-22 T 17-10-2018 BJD13_02790 0e7ca0cf997685fc3fe2155ade244369 193 PIRSF PIRSF016183 1 175 2.4E-68 T 17-10-2018 IPR006839 Ribosome-associated, YjgA BJD13_02790 0e7ca0cf997685fc3fe2155ade244369 193 SUPERFAMILY SSF158710 26 170 9.02E-46 T 17-10-2018 IPR023153 PSPTO4464-like domain superfamily BJD13_02790 0e7ca0cf997685fc3fe2155ade244369 193 Gene3D G3DSA:1.10.60.30 103 176 9.2E-30 T 17-10-2018 BJD13_02790 0e7ca0cf997685fc3fe2155ade244369 193 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 3 171 23.432 T 17-10-2018 IPR006839 Ribosome-associated, YjgA BJD13_02790 0e7ca0cf997685fc3fe2155ade244369 193 Pfam PF04751 Protein of unknown function (DUF615) 14 167 5.3E-49 T 17-10-2018 IPR006839 Ribosome-associated, YjgA BJD13_12835 71ba5f88708a29bc8e7408ed84e3b062 361 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 17-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BJD13_12835 71ba5f88708a29bc8e7408ed84e3b062 361 ProSitePatterns PS01348 MraY family signature 2. 190 201 - T 17-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BJD13_12835 71ba5f88708a29bc8e7408ed84e3b062 361 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 359 24.531 T 17-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BJD13_12835 71ba5f88708a29bc8e7408ed84e3b062 361 Pfam PF00953 Glycosyl transferase family 4 99 285 1.5E-33 T 17-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 BJD13_12835 71ba5f88708a29bc8e7408ed84e3b062 361 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 361 8.9E-130 T 17-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BJD13_11065 ed8cebac1639f2a8fe84a2a1be58326f 319 SUPERFAMILY SSF52540 7 210 1.81E-39 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_11065 ed8cebac1639f2a8fe84a2a1be58326f 319 Gene3D G3DSA:3.40.50.300 4 171 2.8E-42 T 17-10-2018 BJD13_11065 ed8cebac1639f2a8fe84a2a1be58326f 319 Pfam PF13177 DNA polymerase III, delta subunit 9 170 1.9E-32 T 17-10-2018 BJD13_10550 1e95568d5c323e235a1187786aad5482 438 Gene3D G3DSA:3.30.565.10 290 431 1.2E-20 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_10550 1e95568d5c323e235a1187786aad5482 438 SUPERFAMILY SSF55874 293 430 5.63E-22 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_10550 1e95568d5c323e235a1187786aad5482 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 431 2.7E-5 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_10550 1e95568d5c323e235a1187786aad5482 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 364 378 2.7E-5 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_10550 1e95568d5c323e235a1187786aad5482 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 394 412 2.7E-5 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_10550 1e95568d5c323e235a1187786aad5482 438 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 430 2.3E-12 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_10550 1e95568d5c323e235a1187786aad5482 438 SUPERFAMILY SSF47384 204 283 1.92E-12 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD13_10550 1e95568d5c323e235a1187786aad5482 438 SMART SM00387 331 434 1.4E-13 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_10550 1e95568d5c323e235a1187786aad5482 438 Gene3D G3DSA:1.10.287.130 170 285 4.4E-16 T 17-10-2018 BJD13_10550 1e95568d5c323e235a1187786aad5482 438 Pfam PF00512 His Kinase A (phospho-acceptor) domain 223 284 2.2E-8 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_10550 1e95568d5c323e235a1187786aad5482 438 SMART SM00388 221 287 5.2E-10 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_02635 c8204dfc5dc00ae6f91db8f9a379aafc 610 SUPERFAMILY SSF90123 21 342 1.01E-51 T 17-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BJD13_02635 c8204dfc5dc00ae6f91db8f9a379aafc 610 SUPERFAMILY SSF52540 351 601 2.38E-84 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_02635 c8204dfc5dc00ae6f91db8f9a379aafc 610 Pfam PF00005 ABC transporter 379 531 3.5E-34 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD13_02635 c8204dfc5dc00ae6f91db8f9a379aafc 610 SMART SM00382 386 577 3.6E-20 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_02635 c8204dfc5dc00ae6f91db8f9a379aafc 610 Gene3D G3DSA:3.40.50.300 351 604 4.2E-87 T 17-10-2018 BJD13_02635 c8204dfc5dc00ae6f91db8f9a379aafc 610 Gene3D G3DSA:1.20.1560.10 14 344 6.1E-29 T 17-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BJD13_02635 c8204dfc5dc00ae6f91db8f9a379aafc 610 Pfam PF00664 ABC transporter transmembrane region 41 303 7.5E-16 T 17-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 BJD13_02635 c8204dfc5dc00ae6f91db8f9a379aafc 610 ProSitePatterns PS00211 ABC transporters family signature. 503 517 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD13_07225 31cec667b26f3ec2f3ea942866b29500 253 SMART SM00419 192 241 1.5E-14 T 17-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 BJD13_07225 31cec667b26f3ec2f3ea942866b29500 253 Pfam PF00027 Cyclic nucleotide-binding domain 59 141 1.3E-14 T 17-10-2018 IPR000595 Cyclic nucleotide-binding domain BJD13_07225 31cec667b26f3ec2f3ea942866b29500 253 Gene3D G3DSA:1.10.10.10 172 252 5.8E-26 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_07225 31cec667b26f3ec2f3ea942866b29500 253 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 214 229 4.5E-11 T 17-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 BJD13_07225 31cec667b26f3ec2f3ea942866b29500 253 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 198 214 4.5E-11 T 17-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 BJD13_07225 31cec667b26f3ec2f3ea942866b29500 253 SUPERFAMILY SSF46785 172 250 1.18E-17 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_07225 31cec667b26f3ec2f3ea942866b29500 253 SUPERFAMILY SSF51206 31 166 3.01E-27 T 17-10-2018 IPR018490 Cyclic nucleotide-binding-like BJD13_07225 31cec667b26f3ec2f3ea942866b29500 253 SMART SM00100 38 156 1.4E-16 T 17-10-2018 IPR000595 Cyclic nucleotide-binding domain BJD13_07225 31cec667b26f3ec2f3ea942866b29500 253 Gene3D G3DSA:2.60.120.10 52 168 1.6E-35 T 17-10-2018 IPR014710 RmlC-like jelly roll fold BJD13_07225 31cec667b26f3ec2f3ea942866b29500 253 Pfam PF13545 Crp-like helix-turn-helix domain 173 248 1.8E-20 T 17-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 BJD13_24000 2511d8343938c1b058281ade2524c7aa 236 TIGRFAM TIGR02791 VirB5: P-type DNA transfer protein VirB5 1 216 1.2E-78 T 17-10-2018 IPR014158 Type IV secretion system, VirB5 BJD13_24000 2511d8343938c1b058281ade2524c7aa 236 Gene3D G3DSA:1.20.58.430 24 216 2.9E-64 T 17-10-2018 IPR023220 Type IV secretion system, VirB5-domain BJD13_24000 2511d8343938c1b058281ade2524c7aa 236 SUPERFAMILY SSF101082 21 216 6.28E-56 T 17-10-2018 BJD13_24000 2511d8343938c1b058281ade2524c7aa 236 Pfam PF07996 Type IV secretion system proteins 21 215 3.0E-68 T 17-10-2018 IPR014158 Type IV secretion system, VirB5 BJD13_18645 6e9f73cf10c36e182c4afacfa3f3f0c4 1106 Gene3D G3DSA:1.25.40.20 900 966 5.2E-14 T 17-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily BJD13_18645 6e9f73cf10c36e182c4afacfa3f3f0c4 1106 SUPERFAMILY SSF48403 240 560 2.49E-46 T 17-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily BJD13_18645 6e9f73cf10c36e182c4afacfa3f3f0c4 1106 Gene3D G3DSA:1.25.40.20 816 899 2.5E-17 T 17-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily BJD13_18645 6e9f73cf10c36e182c4afacfa3f3f0c4 1106 Gene3D G3DSA:1.25.40.20 612 809 1.2E-32 T 17-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily BJD13_18645 6e9f73cf10c36e182c4afacfa3f3f0c4 1106 Gene3D G3DSA:1.25.40.20 238 402 1.1E-31 T 17-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily BJD13_18645 6e9f73cf10c36e182c4afacfa3f3f0c4 1106 Gene3D G3DSA:1.25.40.20 967 1091 4.1E-17 T 17-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily BJD13_18645 6e9f73cf10c36e182c4afacfa3f3f0c4 1106 Gene3D G3DSA:1.25.40.20 403 474 3.9E-15 T 17-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily BJD13_18645 6e9f73cf10c36e182c4afacfa3f3f0c4 1106 SMART SM00248 753 782 0.026 T 17-10-2018 IPR002110 Ankyrin repeat GO:0005515 BJD13_18645 6e9f73cf10c36e182c4afacfa3f3f0c4 1106 SMART SM00248 304 336 7.6 T 17-10-2018 IPR002110 Ankyrin repeat GO:0005515 BJD13_18645 6e9f73cf10c36e182c4afacfa3f3f0c4 1106 SMART SM00248 340 369 0.0098 T 17-10-2018 IPR002110 Ankyrin repeat GO:0005515 BJD13_18645 6e9f73cf10c36e182c4afacfa3f3f0c4 1106 SMART SM00248 917 946 1.0 T 17-10-2018 IPR002110 Ankyrin repeat GO:0005515 BJD13_18645 6e9f73cf10c36e182c4afacfa3f3f0c4 1106 SMART SM00248 950 987 21.0 T 17-10-2018 IPR002110 Ankyrin repeat GO:0005515 BJD13_18645 6e9f73cf10c36e182c4afacfa3f3f0c4 1106 SMART SM00248 439 468 8.4E-4 T 17-10-2018 IPR002110 Ankyrin repeat GO:0005515 BJD13_18645 6e9f73cf10c36e182c4afacfa3f3f0c4 1106 SMART SM00248 235 264 700.0 T 17-10-2018 IPR002110 Ankyrin repeat GO:0005515 BJD13_18645 6e9f73cf10c36e182c4afacfa3f3f0c4 1106 SMART SM00248 373 402 4.9 T 17-10-2018 IPR002110 Ankyrin repeat GO:0005515 BJD13_18645 6e9f73cf10c36e182c4afacfa3f3f0c4 1106 SMART SM00248 404 435 870.0 T 17-10-2018 IPR002110 Ankyrin repeat GO:0005515 BJD13_18645 6e9f73cf10c36e182c4afacfa3f3f0c4 1106 SMART SM00248 472 501 310.0 T 17-10-2018 IPR002110 Ankyrin repeat GO:0005515 BJD13_18645 6e9f73cf10c36e182c4afacfa3f3f0c4 1106 SMART SM00248 851 880 0.24 T 17-10-2018 IPR002110 Ankyrin repeat GO:0005515 BJD13_18645 6e9f73cf10c36e182c4afacfa3f3f0c4 1106 SMART SM00248 681 716 390.0 T 17-10-2018 IPR002110 Ankyrin repeat GO:0005515 BJD13_18645 6e9f73cf10c36e182c4afacfa3f3f0c4 1106 SMART SM00248 1035 1064 0.33 T 17-10-2018 IPR002110 Ankyrin repeat GO:0005515 BJD13_18645 6e9f73cf10c36e182c4afacfa3f3f0c4 1106 SMART SM00248 720 749 1000.0 T 17-10-2018 IPR002110 Ankyrin repeat GO:0005515 BJD13_18645 6e9f73cf10c36e182c4afacfa3f3f0c4 1106 SMART SM00248 505 539 58.0 T 17-10-2018 IPR002110 Ankyrin repeat GO:0005515 BJD13_18645 6e9f73cf10c36e182c4afacfa3f3f0c4 1106 SMART SM00248 884 913 0.97 T 17-10-2018 IPR002110 Ankyrin repeat GO:0005515 BJD13_18645 6e9f73cf10c36e182c4afacfa3f3f0c4 1106 Pfam PF12796 Ankyrin repeats (3 copies) 826 912 3.5E-9 T 17-10-2018 IPR020683 Ankyrin repeat-containing domain BJD13_18645 6e9f73cf10c36e182c4afacfa3f3f0c4 1106 Pfam PF12796 Ankyrin repeats (3 copies) 693 783 2.2E-7 T 17-10-2018 IPR020683 Ankyrin repeat-containing domain BJD13_18645 6e9f73cf10c36e182c4afacfa3f3f0c4 1106 Pfam PF12796 Ankyrin repeats (3 copies) 407 470 2.1E-6 T 17-10-2018 IPR020683 Ankyrin repeat-containing domain BJD13_18645 6e9f73cf10c36e182c4afacfa3f3f0c4 1106 Pfam PF12796 Ankyrin repeats (3 copies) 319 399 9.2E-11 T 17-10-2018 IPR020683 Ankyrin repeat-containing domain BJD13_18645 6e9f73cf10c36e182c4afacfa3f3f0c4 1106 SUPERFAMILY SSF48403 693 1088 3.32E-59 T 17-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily BJD13_18645 6e9f73cf10c36e182c4afacfa3f3f0c4 1106 Gene3D G3DSA:1.25.40.20 475 578 8.2E-14 T 17-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily BJD13_18645 6e9f73cf10c36e182c4afacfa3f3f0c4 1106 Pfam PF00023 Ankyrin repeat 918 949 0.0015 T 17-10-2018 IPR002110 Ankyrin repeat GO:0005515 BJD13_11920 1c3fee5cac0eccf6dd7e1da1d0119a02 216 Gene3D G3DSA:2.40.50.620 38 100 9.5E-15 T 17-10-2018 BJD13_11920 1c3fee5cac0eccf6dd7e1da1d0119a02 216 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 8 211 2.5E-85 T 17-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_11920 1c3fee5cac0eccf6dd7e1da1d0119a02 216 ProSitePatterns PS00474 Ribosomal protein L3 signature. 108 131 - T 17-10-2018 IPR019926 Ribosomal protein L3, conserved site BJD13_11920 1c3fee5cac0eccf6dd7e1da1d0119a02 216 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 6 214 39.155 T 17-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_11920 1c3fee5cac0eccf6dd7e1da1d0119a02 216 Pfam PF00297 Ribosomal protein L3 105 188 3.7E-15 T 17-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_11920 1c3fee5cac0eccf6dd7e1da1d0119a02 216 SUPERFAMILY SSF50447 5 215 4.06E-78 T 17-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BJD13_11920 1c3fee5cac0eccf6dd7e1da1d0119a02 216 Gene3D G3DSA:2.40.30.10 127 216 1.9E-14 T 17-10-2018 BJD13_05670 424975ddf7c808c7426dbf3d77c63053 341 SUPERFAMILY SSF53474 52 341 1.77E-63 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_05670 424975ddf7c808c7426dbf3d77c63053 341 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 106 122 - T 17-10-2018 IPR002168 Lipase, GDXG, putative histidine active site GO:0016787 Reactome: R-HSA-163560 BJD13_05670 424975ddf7c808c7426dbf3d77c63053 341 Gene3D G3DSA:3.40.50.1820 17 341 2.2E-92 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_05670 424975ddf7c808c7426dbf3d77c63053 341 Pfam PF07859 alpha/beta hydrolase fold 107 313 1.6E-65 T 17-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 BJD13_18900 6c8a84eaba72cb07608f2390a902e648 507 SUPERFAMILY SSF56634 23 495 9.16E-190 T 17-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BJD13_18900 6c8a84eaba72cb07608f2390a902e648 507 Pfam PF06628 Catalase-related immune-responsive 430 488 6.5E-13 T 17-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BJD13_18900 6c8a84eaba72cb07608f2390a902e648 507 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 351 359 - T 17-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BJD13_18900 6c8a84eaba72cb07608f2390a902e648 507 Pfam PF00199 Catalase 28 405 1.2E-165 T 17-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BJD13_18900 6c8a84eaba72cb07608f2390a902e648 507 ProSitePatterns PS00438 Catalase proximal active site signature. 64 80 - T 17-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BJD13_18900 6c8a84eaba72cb07608f2390a902e648 507 SMART SM01060 28 408 5.0E-246 T 17-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BJD13_18900 6c8a84eaba72cb07608f2390a902e648 507 PIRSF PIRSF038928 20 496 2.2E-175 T 17-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BJD13_18900 6c8a84eaba72cb07608f2390a902e648 507 Gene3D G3DSA:2.40.180.10 24 507 1.0E-216 T 17-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 BJD13_18900 6c8a84eaba72cb07608f2390a902e648 507 PRINTS PR00067 Catalase signature 338 364 1.7E-67 T 17-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BJD13_18900 6c8a84eaba72cb07608f2390a902e648 507 PRINTS PR00067 Catalase signature 103 121 1.7E-67 T 17-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BJD13_18900 6c8a84eaba72cb07608f2390a902e648 507 PRINTS PR00067 Catalase signature 41 64 1.7E-67 T 17-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BJD13_18900 6c8a84eaba72cb07608f2390a902e648 507 PRINTS PR00067 Catalase signature 306 333 1.7E-67 T 17-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BJD13_18900 6c8a84eaba72cb07608f2390a902e648 507 PRINTS PR00067 Catalase signature 124 141 1.7E-67 T 17-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BJD13_18900 6c8a84eaba72cb07608f2390a902e648 507 PRINTS PR00067 Catalase signature 143 161 1.7E-67 T 17-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BJD13_10315 e04f11e6a3b864016ee3872f3e6122ab 263 SUPERFAMILY SSF46894 135 235 2.04E-22 T 17-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BJD13_10315 e04f11e6a3b864016ee3872f3e6122ab 263 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 234 3.6E-19 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD13_10315 e04f11e6a3b864016ee3872f3e6122ab 263 SMART SM00862 157 234 1.9E-18 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD13_10315 e04f11e6a3b864016ee3872f3e6122ab 263 Gene3D G3DSA:1.10.10.10 135 250 6.0E-26 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_10315 e04f11e6a3b864016ee3872f3e6122ab 263 SUPERFAMILY SSF52172 29 175 1.76E-7 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_21365 2ddf26cc4d0576ee47ec03bea0550058 368 Pfam PF03739 Predicted permease YjgP/YjgQ family 10 365 1.6E-70 T 17-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 BJD13_21365 2ddf26cc4d0576ee47ec03bea0550058 368 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 8 365 1.7E-116 T 17-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 BJD13_13100 4140917050079b44272c6457946fca66 271 Gene3D G3DSA:3.40.30.10 80 269 7.9E-48 T 17-10-2018 BJD13_13100 4140917050079b44272c6457946fca66 271 SUPERFAMILY SSF52833 82 261 3.45E-35 T 17-10-2018 IPR036249 Thioredoxin-like superfamily BJD13_13100 4140917050079b44272c6457946fca66 271 Pfam PF01323 DSBA-like thioredoxin domain 147 256 1.0E-8 T 17-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 BJD13_13665 1ee51a2411d3f978c309bbdfae940326 959 SUPERFAMILY SSF63411 507 735 4.37E-43 T 17-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BJD13_13665 1ee51a2411d3f978c309bbdfae940326 959 SUPERFAMILY SSF63411 41 251 8.98E-51 T 17-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BJD13_13665 1ee51a2411d3f978c309bbdfae940326 959 Gene3D G3DSA:3.30.830.10 740 936 4.1E-38 T 17-10-2018 BJD13_13665 1ee51a2411d3f978c309bbdfae940326 959 Pfam PF05193 Peptidase M16 inactive domain 684 864 5.0E-30 T 17-10-2018 IPR007863 Peptidase M16, C-terminal BJD13_13665 1ee51a2411d3f978c309bbdfae940326 959 Pfam PF05193 Peptidase M16 inactive domain 213 386 2.4E-29 T 17-10-2018 IPR007863 Peptidase M16, C-terminal BJD13_13665 1ee51a2411d3f978c309bbdfae940326 959 SUPERFAMILY SSF63411 745 936 8.33E-31 T 17-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BJD13_13665 1ee51a2411d3f978c309bbdfae940326 959 Gene3D G3DSA:3.30.830.10 520 730 4.7E-42 T 17-10-2018 BJD13_13665 1ee51a2411d3f978c309bbdfae940326 959 SUPERFAMILY SSF63411 273 463 4.0E-29 T 17-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BJD13_13665 1ee51a2411d3f978c309bbdfae940326 959 Gene3D G3DSA:3.30.830.10 42 265 2.4E-63 T 17-10-2018 BJD13_13665 1ee51a2411d3f978c309bbdfae940326 959 Pfam PF00675 Insulinase (Peptidase family M16) 529 652 1.0E-6 T 17-10-2018 IPR011765 Peptidase M16, N-terminal BJD13_13665 1ee51a2411d3f978c309bbdfae940326 959 Pfam PF00675 Insulinase (Peptidase family M16) 56 192 6.5E-15 T 17-10-2018 IPR011765 Peptidase M16, N-terminal BJD13_13665 1ee51a2411d3f978c309bbdfae940326 959 Gene3D G3DSA:3.30.830.10 268 467 2.1E-35 T 17-10-2018 BJD13_02720 cb162e224e78127875d643ec13223c7d 880 Gene3D G3DSA:3.10.20.590 819 880 1.2E-22 T 17-10-2018 BJD13_02720 cb162e224e78127875d643ec13223c7d 880 SUPERFAMILY SSF52374 6 684 5.22E-146 T 17-10-2018 BJD13_02720 cb162e224e78127875d643ec13223c7d 880 Gene3D G3DSA:3.10.330.110 585 647 0.0 T 17-10-2018 BJD13_02720 cb162e224e78127875d643ec13223c7d 880 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 8 879 23.372 T 17-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BJD13_02720 cb162e224e78127875d643ec13223c7d 880 PRINTS PR00985 Leucyl-tRNA synthetase signature 189 202 1.8E-45 T 17-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BJD13_02720 cb162e224e78127875d643ec13223c7d 880 PRINTS PR00985 Leucyl-tRNA synthetase signature 505 523 1.8E-45 T 17-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BJD13_02720 cb162e224e78127875d643ec13223c7d 880 PRINTS PR00985 Leucyl-tRNA synthetase signature 542 564 1.8E-45 T 17-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BJD13_02720 cb162e224e78127875d643ec13223c7d 880 PRINTS PR00985 Leucyl-tRNA synthetase signature 157 173 1.8E-45 T 17-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BJD13_02720 cb162e224e78127875d643ec13223c7d 880 PRINTS PR00985 Leucyl-tRNA synthetase signature 219 238 1.8E-45 T 17-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BJD13_02720 cb162e224e78127875d643ec13223c7d 880 PRINTS PR00985 Leucyl-tRNA synthetase signature 575 585 1.8E-45 T 17-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BJD13_02720 cb162e224e78127875d643ec13223c7d 880 PRINTS PR00985 Leucyl-tRNA synthetase signature 131 148 1.8E-45 T 17-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BJD13_02720 cb162e224e78127875d643ec13223c7d 880 Gene3D G3DSA:3.90.740.10 231 432 0.0 T 17-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 BJD13_02720 cb162e224e78127875d643ec13223c7d 880 Gene3D G3DSA:3.40.50.620 37 584 0.0 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD13_02720 cb162e224e78127875d643ec13223c7d 880 SUPERFAMILY SSF47323 683 879 9.53E-32 T 17-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD13_02720 cb162e224e78127875d643ec13223c7d 880 SUPERFAMILY SSF50677 230 433 1.26E-48 T 17-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 BJD13_02720 cb162e224e78127875d643ec13223c7d 880 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 9 879 0.0 T 17-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BJD13_02720 cb162e224e78127875d643ec13223c7d 880 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 46 57 - T 17-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD13_02720 cb162e224e78127875d643ec13223c7d 880 Pfam PF08264 Anticodon-binding domain of tRNA 718 841 3.9E-13 T 17-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 BJD13_02720 cb162e224e78127875d643ec13223c7d 880 Gene3D G3DSA:1.10.730.10 12 811 0.0 T 17-10-2018 BJD13_02720 cb162e224e78127875d643ec13223c7d 880 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 637 675 3.1E-6 T 17-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD13_02720 cb162e224e78127875d643ec13223c7d 880 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 436 590 4.1E-9 T 17-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD13_02720 cb162e224e78127875d643ec13223c7d 880 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 19 175 2.7E-27 T 17-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD13_02720 cb162e224e78127875d643ec13223c7d 880 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 225 421 5.3E-69 T 17-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 BJD13_12840 44c75f4d94d35ae53ff003ce1f1bc66d 503 SUPERFAMILY SSF53244 324 433 4.35E-26 T 17-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BJD13_12840 44c75f4d94d35ae53ff003ce1f1bc66d 503 Pfam PF02875 Mur ligase family, glutamate ligase domain 333 401 8.5E-10 T 17-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 BJD13_12840 44c75f4d94d35ae53ff003ce1f1bc66d 503 Pfam PF01225 Mur ligase family, catalytic domain 24 93 2.6E-8 T 17-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 BJD13_12840 44c75f4d94d35ae53ff003ce1f1bc66d 503 Gene3D G3DSA:3.90.190.20 322 460 9.7E-29 T 17-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BJD13_12840 44c75f4d94d35ae53ff003ce1f1bc66d 503 SUPERFAMILY SSF63418 2 94 1.83E-22 T 17-10-2018 IPR035911 MurE/MurF, N-terminal BJD13_12840 44c75f4d94d35ae53ff003ce1f1bc66d 503 Gene3D G3DSA:3.40.1190.10 82 320 5.6E-67 T 17-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BJD13_12840 44c75f4d94d35ae53ff003ce1f1bc66d 503 Pfam PF08245 Mur ligase middle domain 107 302 7.9E-43 T 17-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 BJD13_12840 44c75f4d94d35ae53ff003ce1f1bc66d 503 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 1 493 32.793 T 17-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BJD13_12840 44c75f4d94d35ae53ff003ce1f1bc66d 503 Gene3D G3DSA:3.40.1390.10 1 81 8.7E-24 T 17-10-2018 BJD13_12840 44c75f4d94d35ae53ff003ce1f1bc66d 503 SUPERFAMILY SSF53623 102 319 1.7E-51 T 17-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BJD13_12840 44c75f4d94d35ae53ff003ce1f1bc66d 503 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 30 492 6.4E-125 T 17-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BJD13_09145 6a54b7ec1d86d723afc57db6af9c28a3 344 Gene3D G3DSA:3.40.190.10 164 269 1.9E-55 T 17-10-2018 BJD13_09145 6a54b7ec1d86d723afc57db6af9c28a3 344 Pfam PF03466 LysR substrate binding domain 89 296 5.3E-39 T 17-10-2018 IPR005119 LysR, substrate-binding BJD13_09145 6a54b7ec1d86d723afc57db6af9c28a3 344 Gene3D G3DSA:1.10.10.10 3 90 4.6E-28 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_09145 6a54b7ec1d86d723afc57db6af9c28a3 344 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 1.2E-17 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_09145 6a54b7ec1d86d723afc57db6af9c28a3 344 Gene3D G3DSA:3.40.190.10 92 294 1.9E-55 T 17-10-2018 BJD13_09145 6a54b7ec1d86d723afc57db6af9c28a3 344 SUPERFAMILY SSF53850 89 298 3.26E-41 T 17-10-2018 BJD13_09145 6a54b7ec1d86d723afc57db6af9c28a3 344 SUPERFAMILY SSF46785 3 113 2.01E-21 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_11580 ee77c98f337e110047527585a4115e2b 180 SUPERFAMILY SSF48317 12 173 5.23E-35 T 17-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily BJD13_11580 ee77c98f337e110047527585a4115e2b 180 Gene3D G3DSA:1.20.144.10 93 179 5.7E-17 T 17-10-2018 BJD13_11580 ee77c98f337e110047527585a4115e2b 180 SMART SM00014 63 172 1.9E-14 T 17-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BJD13_11580 ee77c98f337e110047527585a4115e2b 180 Pfam PF01569 PAP2 superfamily 68 173 8.4E-20 T 17-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BJD13_10035 77b1370c23eca338c24f5825748df8e7 395 Pfam PF16113 Enoyl-CoA hydratase/isomerase 25 373 1.8E-112 T 17-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 BJD13_10035 77b1370c23eca338c24f5825748df8e7 395 SUPERFAMILY SSF52096 22 360 3.06E-57 T 17-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BJD13_10035 77b1370c23eca338c24f5825748df8e7 395 Gene3D G3DSA:3.90.226.10 10 390 4.4E-122 T 17-10-2018 BJD13_13470 edf3a03b1ab19cd0b0b64b805d514923 217 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 20 174 1.6E-9 T 17-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BJD13_13470 edf3a03b1ab19cd0b0b64b805d514923 217 Pfam PF00702 haloacid dehalogenase-like hydrolase 71 174 5.0E-15 T 17-10-2018 BJD13_13470 edf3a03b1ab19cd0b0b64b805d514923 217 SUPERFAMILY SSF56784 14 202 6.37E-36 T 17-10-2018 IPR036412 HAD-like superfamily BJD13_13470 edf3a03b1ab19cd0b0b64b805d514923 217 Gene3D G3DSA:1.10.260.80 29 79 1.8E-61 T 17-10-2018 BJD13_13470 edf3a03b1ab19cd0b0b64b805d514923 217 Gene3D G3DSA:3.40.50.1000 17 196 1.8E-61 T 17-10-2018 IPR023214 HAD superfamily BJD13_13470 edf3a03b1ab19cd0b0b64b805d514923 217 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 18 180 6.4E-9 T 17-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BJD13_09230 18fb5cdbaf0c04fcb55ac051a6f9fc4d 71 PIRSF PIRSF002599 2 71 8.8E-22 T 17-10-2018 IPR012156 Cold shock, CspA GO:0003676 BJD13_09230 18fb5cdbaf0c04fcb55ac051a6f9fc4d 71 SUPERFAMILY SSF50249 4 70 1.33E-23 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD13_09230 18fb5cdbaf0c04fcb55ac051a6f9fc4d 71 Gene3D G3DSA:2.40.50.140 6 70 9.2E-27 T 17-10-2018 BJD13_09230 18fb5cdbaf0c04fcb55ac051a6f9fc4d 71 Pfam PF00313 'Cold-shock' DNA-binding domain 8 70 1.9E-27 T 17-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BJD13_09230 18fb5cdbaf0c04fcb55ac051a6f9fc4d 71 PRINTS PR00050 Cold shock protein signature 29 38 5.3E-18 T 17-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BJD13_09230 18fb5cdbaf0c04fcb55ac051a6f9fc4d 71 PRINTS PR00050 Cold shock protein signature 9 24 5.3E-18 T 17-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BJD13_09230 18fb5cdbaf0c04fcb55ac051a6f9fc4d 71 PRINTS PR00050 Cold shock protein signature 44 62 5.3E-18 T 17-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BJD13_09230 18fb5cdbaf0c04fcb55ac051a6f9fc4d 71 SMART SM00357 8 71 4.6E-28 T 17-10-2018 IPR011129 Cold shock domain GO:0003676 BJD13_09230 18fb5cdbaf0c04fcb55ac051a6f9fc4d 71 ProSitePatterns PS00352 'Cold-shock' domain signature. 20 38 - T 17-10-2018 IPR019844 Cold-shock conserved site BJD13_22245 8be651de573ab00ac1dfa481d605deab 177 Gene3D G3DSA:2.30.30.830 82 175 4.5E-30 T 17-10-2018 BJD13_22245 8be651de573ab00ac1dfa481d605deab 177 PIRSF PIRSF016481 3 177 2.6E-60 T 17-10-2018 IPR007446 Pilus assembly protein PilP BJD13_22245 8be651de573ab00ac1dfa481d605deab 177 Pfam PF04351 Pilus assembly protein, PilP 34 174 2.1E-46 T 17-10-2018 IPR007446 Pilus assembly protein PilP BJD13_06115 3702164ab460a0067b5a89a490f76ebc 190 SMART SM01012 128 183 8.9E-23 T 17-10-2018 IPR005561 ANTAR domain GO:0003723 BJD13_06115 3702164ab460a0067b5a89a490f76ebc 190 PIRSF PIRSF036382 1 190 4.1E-67 T 17-10-2018 IPR008327 Signal transduction response regulator, antiterminator BJD13_06115 3702164ab460a0067b5a89a490f76ebc 190 SMART SM00448 1 112 1.7E-8 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_06115 3702164ab460a0067b5a89a490f76ebc 190 Pfam PF03861 ANTAR domain 131 183 3.7E-19 T 17-10-2018 IPR005561 ANTAR domain GO:0003723 BJD13_06115 3702164ab460a0067b5a89a490f76ebc 190 Gene3D G3DSA:3.40.50.2300 1 129 6.9E-19 T 17-10-2018 BJD13_06115 3702164ab460a0067b5a89a490f76ebc 190 SUPERFAMILY SSF52172 1 183 1.28E-47 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_06115 3702164ab460a0067b5a89a490f76ebc 190 Pfam PF00072 Response regulator receiver domain 3 109 7.3E-13 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_06115 3702164ab460a0067b5a89a490f76ebc 190 Gene3D G3DSA:1.10.10.10 130 188 4.5E-19 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_14405 0a147f28933839ce69d0bf10fcdffc96 756 PRINTS PR00344 Bacterial sensor protein C-terminal signature 250 264 8.1E-18 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_14405 0a147f28933839ce69d0bf10fcdffc96 756 PRINTS PR00344 Bacterial sensor protein C-terminal signature 268 278 8.1E-18 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_14405 0a147f28933839ce69d0bf10fcdffc96 756 PRINTS PR00344 Bacterial sensor protein C-terminal signature 309 322 8.1E-18 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_14405 0a147f28933839ce69d0bf10fcdffc96 756 PRINTS PR00344 Bacterial sensor protein C-terminal signature 285 303 8.1E-18 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_14405 0a147f28933839ce69d0bf10fcdffc96 756 Pfam PF00072 Response regulator receiver domain 486 598 1.3E-24 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_14405 0a147f28933839ce69d0bf10fcdffc96 756 Pfam PF01627 Hpt domain 657 727 5.6E-12 T 17-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BJD13_14405 0a147f28933839ce69d0bf10fcdffc96 756 SUPERFAMILY SSF55874 151 323 6.02E-50 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_14405 0a147f28933839ce69d0bf10fcdffc96 756 SUPERFAMILY SSF52172 483 606 2.85E-39 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_14405 0a147f28933839ce69d0bf10fcdffc96 756 SUPERFAMILY SSF47384 80 163 1.29E-19 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD13_14405 0a147f28933839ce69d0bf10fcdffc96 756 SUPERFAMILY SSF47226 634 740 4.58E-24 T 17-10-2018 IPR036641 HPT domain superfamily GO:0000160 BJD13_14405 0a147f28933839ce69d0bf10fcdffc96 756 Gene3D G3DSA:3.40.50.2300 478 604 2.2E-43 T 17-10-2018 BJD13_14405 0a147f28933839ce69d0bf10fcdffc96 756 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 209 323 5.1E-33 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_14405 0a147f28933839ce69d0bf10fcdffc96 756 Gene3D G3DSA:3.30.565.10 162 325 1.1E-55 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_14405 0a147f28933839ce69d0bf10fcdffc96 756 SMART SM00448 484 600 1.7E-37 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_14405 0a147f28933839ce69d0bf10fcdffc96 756 Pfam PF00512 His Kinase A (phospho-acceptor) domain 97 161 2.5E-17 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_14405 0a147f28933839ce69d0bf10fcdffc96 756 SMART SM00073 646 740 1.7E-4 T 17-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BJD13_14405 0a147f28933839ce69d0bf10fcdffc96 756 SMART SM00388 97 162 9.1E-21 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_14405 0a147f28933839ce69d0bf10fcdffc96 756 SMART SM00387 209 325 5.6E-43 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_14405 0a147f28933839ce69d0bf10fcdffc96 756 Gene3D G3DSA:1.20.120.160 629 745 7.3E-23 T 17-10-2018 IPR036641 HPT domain superfamily GO:0000160 BJD13_14405 0a147f28933839ce69d0bf10fcdffc96 756 Gene3D G3DSA:1.10.287.130 61 160 4.5E-24 T 17-10-2018 BJD13_15395 8dcba0a943eaac812d1fde2b136c1866 459 Gene3D G3DSA:1.10.287.130 235 299 5.0E-16 T 17-10-2018 BJD13_15395 8dcba0a943eaac812d1fde2b136c1866 459 SUPERFAMILY SSF47384 219 298 3.53E-15 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD13_15395 8dcba0a943eaac812d1fde2b136c1866 459 Pfam PF00512 His Kinase A (phospho-acceptor) domain 236 296 2.8E-13 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_15395 8dcba0a943eaac812d1fde2b136c1866 459 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 455 4.7E-20 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_15395 8dcba0a943eaac812d1fde2b136c1866 459 SUPERFAMILY SSF55874 289 456 4.85E-40 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_15395 8dcba0a943eaac812d1fde2b136c1866 459 Gene3D G3DSA:1.20.1480.50 150 234 4.8E-10 T 17-10-2018 BJD13_15395 8dcba0a943eaac812d1fde2b136c1866 459 SMART SM00304 183 235 8.1E-11 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_15395 8dcba0a943eaac812d1fde2b136c1866 459 SMART SM00388 236 300 1.6E-13 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_15395 8dcba0a943eaac812d1fde2b136c1866 459 Pfam PF00672 HAMP domain 183 232 3.7E-11 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_15395 8dcba0a943eaac812d1fde2b136c1866 459 SMART SM00387 346 458 8.5E-36 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_15395 8dcba0a943eaac812d1fde2b136c1866 459 SUPERFAMILY SSF158472 183 232 2.88E-8 T 17-10-2018 BJD13_15395 8dcba0a943eaac812d1fde2b136c1866 459 Gene3D G3DSA:3.30.565.10 306 457 4.2E-38 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_15395 8dcba0a943eaac812d1fde2b136c1866 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 411 3.0E-12 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_15395 8dcba0a943eaac812d1fde2b136c1866 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 436 3.0E-12 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_15395 8dcba0a943eaac812d1fde2b136c1866 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 397 3.0E-12 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_23535 df6bd007e95ae143681cea4c909a7195 893 SUPERFAMILY SSF49785 31 235 5.1E-54 T 17-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD13_23535 df6bd007e95ae143681cea4c909a7195 893 SUPERFAMILY SSF51445 344 700 4.52E-107 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily BJD13_23535 df6bd007e95ae143681cea4c909a7195 893 SUPERFAMILY SSF49303 709 801 1.01E-12 T 17-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily BJD13_23535 df6bd007e95ae143681cea4c909a7195 893 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 362 501 2.7E-4 T 17-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 BJD13_23535 df6bd007e95ae143681cea4c909a7195 893 SUPERFAMILY SSF49303 237 345 8.35E-19 T 17-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily BJD13_23535 df6bd007e95ae143681cea4c909a7195 893 Gene3D G3DSA:3.20.20.80 345 698 1.5E-122 T 17-10-2018 BJD13_23535 df6bd007e95ae143681cea4c909a7195 893 SUPERFAMILY SSF49303 803 879 3.6E-17 T 17-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily BJD13_23535 df6bd007e95ae143681cea4c909a7195 893 Gene3D G3DSA:2.60.40.10 798 884 1.3E-16 T 17-10-2018 IPR013783 Immunoglobulin-like fold BJD13_23535 df6bd007e95ae143681cea4c909a7195 893 Pfam PF00703 Glycosyl hydrolases family 2 237 346 6.4E-8 T 17-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 BJD13_23535 df6bd007e95ae143681cea4c909a7195 893 Gene3D G3DSA:2.60.40.10 237 344 5.6E-19 T 17-10-2018 IPR013783 Immunoglobulin-like fold BJD13_23535 df6bd007e95ae143681cea4c909a7195 893 Gene3D G3DSA:2.60.120.260 29 235 5.1E-65 T 17-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD13_15235 e7dadc720526c9eba2497e131d6170a8 315 SUPERFAMILY SSF56349 10 307 5.0E-44 T 17-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BJD13_15235 e7dadc720526c9eba2497e131d6170a8 315 Pfam PF00589 Phage integrase family 108 308 4.8E-38 T 17-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 BJD13_15235 e7dadc720526c9eba2497e131d6170a8 315 Gene3D G3DSA:1.10.150.130 5 92 1.7E-31 T 17-10-2018 IPR010998 Integrase/recombinase, N-terminal BJD13_15235 e7dadc720526c9eba2497e131d6170a8 315 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 8 91 2.2E-22 T 17-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 BJD13_15235 e7dadc720526c9eba2497e131d6170a8 315 Gene3D G3DSA:1.10.443.10 98 311 9.0E-59 T 17-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 BJD13_15235 e7dadc720526c9eba2497e131d6170a8 315 TIGRFAM TIGR02249 integrase_gron: integron integrase 8 315 4.1E-146 T 17-10-2018 IPR011946 Integrase, integron-type GO:0003677|GO:0006310|GO:0015074 BJD13_10820 ab8f7738cfc4ac36ff4215f34099d3ac 784 Gene3D G3DSA:1.20.1610.10 477 637 2.6E-261 T 17-10-2018 BJD13_10820 ab8f7738cfc4ac36ff4215f34099d3ac 784 Gene3D G3DSA:3.30.2080.10 333 765 2.6E-261 T 17-10-2018 BJD13_10820 ab8f7738cfc4ac36ff4215f34099d3ac 784 Gene3D G3DSA:1.20.1050.60 385 476 2.6E-261 T 17-10-2018 BJD13_10820 ab8f7738cfc4ac36ff4215f34099d3ac 784 Gene3D G3DSA:2.70.98.10 38 384 2.6E-261 T 17-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 BJD13_10820 ab8f7738cfc4ac36ff4215f34099d3ac 784 Pfam PF07971 Glycosyl hydrolase family 92 275 761 1.5E-176 T 17-10-2018 IPR012939 Glycosyl hydrolase family 92 BJD13_10820 ab8f7738cfc4ac36ff4215f34099d3ac 784 SUPERFAMILY SSF48208 300 753 9.52E-33 T 17-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 BJD13_10820 ab8f7738cfc4ac36ff4215f34099d3ac 784 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 32 766 5.0E-204 T 17-10-2018 IPR005887 Alpha-1,2-mannosidase, putative BJD13_12980 4a7f2eeafcabbcca73305be4c147c02a 162 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 19 150 22.384 T 17-10-2018 IPR011605 NusB antitermination factor GO:0006353 BJD13_12980 4a7f2eeafcabbcca73305be4c147c02a 162 Gene3D G3DSA:1.10.940.10 15 153 5.7E-45 T 17-10-2018 IPR035926 NusB-like superfamily BJD13_12980 4a7f2eeafcabbcca73305be4c147c02a 162 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 21 147 1.1E-42 T 17-10-2018 IPR011605 NusB antitermination factor GO:0006353 BJD13_12980 4a7f2eeafcabbcca73305be4c147c02a 162 Pfam PF01029 NusB family 23 146 1.4E-33 T 17-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 BJD13_12980 4a7f2eeafcabbcca73305be4c147c02a 162 SUPERFAMILY SSF48013 19 150 9.68E-41 T 17-10-2018 IPR035926 NusB-like superfamily BJD13_04080 e71c928e26ae89262bb2cd2a75a39b54 281 Gene3D G3DSA:3.40.140.10 125 275 1.5E-51 T 17-10-2018 BJD13_04080 e71c928e26ae89262bb2cd2a75a39b54 281 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 30 272 6.8E-67 T 17-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 BJD13_04080 e71c928e26ae89262bb2cd2a75a39b54 281 SUPERFAMILY SSF53927 16 271 3.61E-82 T 17-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 BJD13_04080 e71c928e26ae89262bb2cd2a75a39b54 281 Pfam PF02634 FdhD/NarQ family 34 271 1.8E-80 T 17-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 BJD13_04080 e71c928e26ae89262bb2cd2a75a39b54 281 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 12 272 35.249 T 17-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 BJD13_04080 e71c928e26ae89262bb2cd2a75a39b54 281 Gene3D G3DSA:3.10.20.10 36 122 3.9E-9 T 17-10-2018 BJD13_04080 e71c928e26ae89262bb2cd2a75a39b54 281 PIRSF PIRSF015626 1 274 8.6E-88 T 17-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 BJD13_05785 4847f706f10213382e1cee2548b46e5d 1017 Gene3D G3DSA:2.130.10.10 259 417 1.3E-12 T 17-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BJD13_05785 4847f706f10213382e1cee2548b46e5d 1017 Gene3D G3DSA:3.30.565.10 872 996 4.5E-22 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_05785 4847f706f10213382e1cee2548b46e5d 1017 Pfam PF07495 Y_Y_Y domain 689 749 6.7E-17 T 17-10-2018 IPR011123 Two component regulator three Y BJD13_05785 4847f706f10213382e1cee2548b46e5d 1017 Gene3D G3DSA:2.130.10.10 435 647 1.6E-9 T 17-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BJD13_05785 4847f706f10213382e1cee2548b46e5d 1017 Gene3D G3DSA:2.130.10.10 36 244 6.7E-24 T 17-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BJD13_05785 4847f706f10213382e1cee2548b46e5d 1017 Gene3D G3DSA:2.60.40.10 648 761 1.8E-28 T 17-10-2018 IPR013783 Immunoglobulin-like fold BJD13_05785 4847f706f10213382e1cee2548b46e5d 1017 Pfam PF07730 Histidine kinase 796 860 2.4E-10 T 17-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 BJD13_05785 4847f706f10213382e1cee2548b46e5d 1017 SUPERFAMILY SSF55874 866 995 1.44E-13 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_05785 4847f706f10213382e1cee2548b46e5d 1017 SMART SM00387 900 997 8.8E-5 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_05785 4847f706f10213382e1cee2548b46e5d 1017 SUPERFAMILY SSF63829 112 293 3.11E-9 T 17-10-2018 BJD13_22825 6c069cc4b37ce5253707b7192e1066f0 592 Pfam PF00723 Glycosyl hydrolases family 15 220 522 2.7E-22 T 17-10-2018 IPR011613 GH15-like domain Reactome: R-HSA-70221 BJD13_22825 6c069cc4b37ce5253707b7192e1066f0 592 Gene3D G3DSA:1.50.10.10 218 590 5.2E-80 T 17-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 BJD13_22825 6c069cc4b37ce5253707b7192e1066f0 592 SUPERFAMILY SSF48208 204 588 2.99E-91 T 17-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 BJD13_09460 3e91fd75bb9622ad0a85f5e176b4633e 292 SUPERFAMILY SSF46934 1 55 2.01E-19 T 17-10-2018 IPR009060 UBA-like superfamily GO:0005515 BJD13_09460 3e91fd75bb9622ad0a85f5e176b4633e 292 Pfam PF00889 Elongation factor TS 70 272 6.2E-65 T 17-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 BJD13_09460 3e91fd75bb9622ad0a85f5e176b4633e 292 Gene3D G3DSA:1.10.286.20 189 237 6.6E-39 T 17-10-2018 BJD13_09460 3e91fd75bb9622ad0a85f5e176b4633e 292 Gene3D G3DSA:1.10.8.10 1 55 4.8E-27 T 17-10-2018 BJD13_09460 3e91fd75bb9622ad0a85f5e176b4633e 292 Hamap MF_00050 Elongation factor Ts [tsf]. 1 289 74.578 T 17-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BJD13_09460 3e91fd75bb9622ad0a85f5e176b4633e 292 ProSitePatterns PS01127 Elongation factor Ts signature 2. 74 84 - T 17-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BJD13_09460 3e91fd75bb9622ad0a85f5e176b4633e 292 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 17-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BJD13_09460 3e91fd75bb9622ad0a85f5e176b4633e 292 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 289 3.2E-99 T 17-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BJD13_09460 3e91fd75bb9622ad0a85f5e176b4633e 292 Gene3D G3DSA:3.30.479.20 56 147 1.0E-24 T 17-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 BJD13_09460 3e91fd75bb9622ad0a85f5e176b4633e 292 Gene3D G3DSA:3.30.479.20 153 271 6.6E-39 T 17-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 BJD13_09460 3e91fd75bb9622ad0a85f5e176b4633e 292 SUPERFAMILY SSF54713 55 144 2.13E-20 T 17-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 BJD13_09460 3e91fd75bb9622ad0a85f5e176b4633e 292 SUPERFAMILY SSF54713 149 289 5.1E-46 T 17-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 BJD13_05810 5fcfe5333657ce31280a338305324cce 404 PRINTS PR00359 B-class P450 signature 272 283 5.9E-34 T 17-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BJD13_05810 5fcfe5333657ce31280a338305324cce 404 PRINTS PR00359 B-class P450 signature 131 147 5.9E-34 T 17-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BJD13_05810 5fcfe5333657ce31280a338305324cce 404 PRINTS PR00359 B-class P450 signature 191 213 5.9E-34 T 17-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BJD13_05810 5fcfe5333657ce31280a338305324cce 404 PRINTS PR00359 B-class P450 signature 317 332 5.9E-34 T 17-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BJD13_05810 5fcfe5333657ce31280a338305324cce 404 PRINTS PR00359 B-class P450 signature 340 349 5.9E-34 T 17-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BJD13_05810 5fcfe5333657ce31280a338305324cce 404 PRINTS PR00359 B-class P450 signature 349 360 5.9E-34 T 17-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BJD13_05810 5fcfe5333657ce31280a338305324cce 404 PRINTS PR00359 B-class P450 signature 148 163 5.9E-34 T 17-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BJD13_05810 5fcfe5333657ce31280a338305324cce 404 PRINTS PR00359 B-class P450 signature 289 316 5.9E-34 T 17-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BJD13_05810 5fcfe5333657ce31280a338305324cce 404 Gene3D G3DSA:1.10.630.10 3 403 5.3E-98 T 17-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 BJD13_05810 5fcfe5333657ce31280a338305324cce 404 PRINTS PR00385 P450 superfamily signature 272 283 1.9E-8 T 17-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 BJD13_05810 5fcfe5333657ce31280a338305324cce 404 PRINTS PR00385 P450 superfamily signature 237 254 1.9E-8 T 17-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 BJD13_05810 5fcfe5333657ce31280a338305324cce 404 PRINTS PR00385 P450 superfamily signature 340 349 1.9E-8 T 17-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 BJD13_05810 5fcfe5333657ce31280a338305324cce 404 PRINTS PR00385 P450 superfamily signature 349 360 1.9E-8 T 17-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 BJD13_05810 5fcfe5333657ce31280a338305324cce 404 SUPERFAMILY SSF48264 15 398 4.06E-81 T 17-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 BJD13_05810 5fcfe5333657ce31280a338305324cce 404 Pfam PF00067 Cytochrome P450 200 369 4.3E-28 T 17-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 BJD13_05810 5fcfe5333657ce31280a338305324cce 404 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 342 351 - T 17-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 BJD13_21890 96e9f492d6a5a81ad59429e7f2914a0e 573 Gene3D G3DSA:3.40.50.970 362 570 1.5E-67 T 17-10-2018 BJD13_21890 96e9f492d6a5a81ad59429e7f2914a0e 573 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 198 332 8.7E-43 T 17-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 BJD13_21890 96e9f492d6a5a81ad59429e7f2914a0e 573 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 423 442 - T 17-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 BJD13_21890 96e9f492d6a5a81ad59429e7f2914a0e 573 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 386 534 1.5E-48 T 17-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 BJD13_21890 96e9f492d6a5a81ad59429e7f2914a0e 573 SUPERFAMILY SSF52518 10 190 1.49E-61 T 17-10-2018 IPR029061 Thiamin diphosphate-binding fold BJD13_21890 96e9f492d6a5a81ad59429e7f2914a0e 573 SUPERFAMILY SSF52518 368 559 6.25E-67 T 17-10-2018 IPR029061 Thiamin diphosphate-binding fold BJD13_21890 96e9f492d6a5a81ad59429e7f2914a0e 573 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 11 174 4.7E-58 T 17-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 BJD13_21890 96e9f492d6a5a81ad59429e7f2914a0e 573 Gene3D G3DSA:3.40.50.970 2 184 2.0E-70 T 17-10-2018 BJD13_21890 96e9f492d6a5a81ad59429e7f2914a0e 573 Gene3D G3DSA:3.40.50.1220 189 361 9.7E-54 T 17-10-2018 BJD13_21890 96e9f492d6a5a81ad59429e7f2914a0e 573 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 11 558 1.9E-206 T 17-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 BJD13_21890 96e9f492d6a5a81ad59429e7f2914a0e 573 SUPERFAMILY SSF52467 195 353 1.56E-53 T 17-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily BJD13_17445 2ee8427be52cabe62ddf48f5ddd0b6a9 200 Gene3D G3DSA:3.30.1130.10 64 197 3.5E-52 T 17-10-2018 BJD13_17445 2ee8427be52cabe62ddf48f5ddd0b6a9 200 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 17 194 5.4E-66 T 17-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 BJD13_17445 2ee8427be52cabe62ddf48f5ddd0b6a9 200 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 74 90 - T 17-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 BJD13_17445 2ee8427be52cabe62ddf48f5ddd0b6a9 200 Pfam PF01227 GTP cyclohydrolase I 17 194 1.9E-73 T 17-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 BJD13_17445 2ee8427be52cabe62ddf48f5ddd0b6a9 200 Gene3D G3DSA:1.10.286.10 1 61 2.3E-20 T 17-10-2018 BJD13_17445 2ee8427be52cabe62ddf48f5ddd0b6a9 200 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 122 132 - T 17-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 BJD13_17445 2ee8427be52cabe62ddf48f5ddd0b6a9 200 SUPERFAMILY SSF55620 6 195 1.04E-75 T 17-10-2018 BJD13_17445 2ee8427be52cabe62ddf48f5ddd0b6a9 200 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 12 195 39.21 T 17-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 BJD13_23400 c66f220d44dfd848db615f8b62a66aea 316 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 125 297 8.5E-73 T 17-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 BJD13_23400 c66f220d44dfd848db615f8b62a66aea 316 Hamap MF_00162 Glutathione synthetase [gshB]. 1 316 156.837 T 17-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 BJD13_23400 c66f220d44dfd848db615f8b62a66aea 316 Gene3D G3DSA:3.40.50.20 8 115 1.2E-105 T 17-10-2018 BJD13_23400 c66f220d44dfd848db615f8b62a66aea 316 TIGRFAM TIGR01380 glut_syn: glutathione synthase 3 312 3.3E-137 T 17-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 BJD13_23400 c66f220d44dfd848db615f8b62a66aea 316 Gene3D G3DSA:3.30.1490.20 138 202 1.2E-105 T 17-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BJD13_23400 c66f220d44dfd848db615f8b62a66aea 316 SUPERFAMILY SSF56059 124 311 2.12E-54 T 17-10-2018 BJD13_23400 c66f220d44dfd848db615f8b62a66aea 316 SUPERFAMILY SSF52440 3 123 1.61E-38 T 17-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BJD13_23400 c66f220d44dfd848db615f8b62a66aea 316 Gene3D G3DSA:3.30.470.20 116 296 1.2E-105 T 17-10-2018 BJD13_23400 c66f220d44dfd848db615f8b62a66aea 316 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 3 121 6.0E-39 T 17-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 BJD13_11550 37b9d60e8a12311c3c47c85c16882904 568 Gene3D G3DSA:3.30.2010.10 85 163 1.6E-6 T 17-10-2018 BJD13_11550 37b9d60e8a12311c3c47c85c16882904 568 Pfam PF01435 Peptidase family M48 86 280 1.9E-38 T 17-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 BJD13_11550 37b9d60e8a12311c3c47c85c16882904 568 Gene3D G3DSA:1.25.40.10 377 539 2.2E-6 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_11550 37b9d60e8a12311c3c47c85c16882904 568 SUPERFAMILY SSF48452 358 448 6.87E-7 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_11550 37b9d60e8a12311c3c47c85c16882904 568 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 21 558 37.532 T 17-10-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 BJD13_23525 cb2793998afda93c30853dd4b5479de5 487 PIRSF PIRSF028846 50 486 2.3E-198 T 17-10-2018 IPR008313 Metal-independent alpha-mannosidase BJD13_23525 cb2793998afda93c30853dd4b5479de5 487 Gene3D G3DSA:1.50.10.10 56 487 3.2E-168 T 17-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 BJD13_23525 cb2793998afda93c30853dd4b5479de5 487 SMART SM01149 72 475 3.1E-253 T 17-10-2018 IPR008313 Metal-independent alpha-mannosidase BJD13_23525 cb2793998afda93c30853dd4b5479de5 487 Pfam PF06824 Metal-independent alpha-mannosidase (GH125) 72 474 1.1E-149 T 17-10-2018 IPR008313 Metal-independent alpha-mannosidase BJD13_23525 cb2793998afda93c30853dd4b5479de5 487 SUPERFAMILY SSF48208 42 484 2.19E-169 T 17-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 BJD13_19785 9e93f5b91056f307fd9fb2e0b762ab3e 228 Pfam PF00005 ABC transporter 20 167 7.1E-31 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD13_19785 9e93f5b91056f307fd9fb2e0b762ab3e 228 SUPERFAMILY SSF52540 3 225 4.98E-65 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_19785 9e93f5b91056f307fd9fb2e0b762ab3e 228 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD13_19785 9e93f5b91056f307fd9fb2e0b762ab3e 228 SMART SM00382 29 216 1.3E-6 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_19785 9e93f5b91056f307fd9fb2e0b762ab3e 228 Gene3D G3DSA:3.40.50.300 2 228 1.3E-63 T 17-10-2018 BJD13_19785 9e93f5b91056f307fd9fb2e0b762ab3e 228 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 4 216 7.0E-84 T 17-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 BJD13_16775 e8c59e5ad3b1df45ff56bb35db71a6e3 128 Gene3D G3DSA:1.10.10.10 2 69 7.1E-12 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_16775 e8c59e5ad3b1df45ff56bb35db71a6e3 128 Pfam PF03965 Penicillinase repressor 6 119 1.9E-27 T 17-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 BJD13_16775 e8c59e5ad3b1df45ff56bb35db71a6e3 128 PIRSF PIRSF019455 1 128 7.0E-25 T 17-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 BJD13_16775 e8c59e5ad3b1df45ff56bb35db71a6e3 128 SUPERFAMILY SSF46785 4 121 1.25E-22 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_21850 5b78899fdcd143e2c0b9e8cbe4f3ba1e 1000 Pfam PF07494 Two component regulator propeller 477 499 0.0052 T 17-10-2018 IPR011110 Two component regulator propeller BJD13_21850 5b78899fdcd143e2c0b9e8cbe4f3ba1e 1000 Pfam PF07494 Two component regulator propeller 61 83 0.01 T 17-10-2018 IPR011110 Two component regulator propeller BJD13_21850 5b78899fdcd143e2c0b9e8cbe4f3ba1e 1000 Gene3D G3DSA:3.30.70.270 826 998 3.7E-47 T 17-10-2018 BJD13_21850 5b78899fdcd143e2c0b9e8cbe4f3ba1e 1000 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 836 997 6.5E-38 T 17-10-2018 IPR000160 GGDEF domain BJD13_21850 5b78899fdcd143e2c0b9e8cbe4f3ba1e 1000 SUPERFAMILY SSF63829 130 296 3.92E-10 T 17-10-2018 BJD13_21850 5b78899fdcd143e2c0b9e8cbe4f3ba1e 1000 Gene3D G3DSA:2.130.10.10 44 222 3.0E-21 T 17-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BJD13_21850 5b78899fdcd143e2c0b9e8cbe4f3ba1e 1000 SMART SM00267 829 1000 7.0E-43 T 17-10-2018 IPR000160 GGDEF domain BJD13_21850 5b78899fdcd143e2c0b9e8cbe4f3ba1e 1000 SUPERFAMILY SSF55073 845 997 1.1E-38 T 17-10-2018 IPR029787 Nucleotide cyclase BJD13_21850 5b78899fdcd143e2c0b9e8cbe4f3ba1e 1000 Gene3D G3DSA:2.60.40.10 680 773 6.8E-21 T 17-10-2018 IPR013783 Immunoglobulin-like fold BJD13_21850 5b78899fdcd143e2c0b9e8cbe4f3ba1e 1000 SUPERFAMILY SSF63829 312 547 7.52E-8 T 17-10-2018 BJD13_21850 5b78899fdcd143e2c0b9e8cbe4f3ba1e 1000 Gene3D G3DSA:2.130.10.10 394 652 4.3E-40 T 17-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BJD13_21850 5b78899fdcd143e2c0b9e8cbe4f3ba1e 1000 Gene3D G3DSA:2.130.10.10 225 391 1.7E-15 T 17-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BJD13_21850 5b78899fdcd143e2c0b9e8cbe4f3ba1e 1000 Pfam PF00990 Diguanylate cyclase, GGDEF domain 840 996 1.2E-35 T 17-10-2018 IPR000160 GGDEF domain BJD13_21850 5b78899fdcd143e2c0b9e8cbe4f3ba1e 1000 Pfam PF07495 Y_Y_Y domain 697 753 2.7E-17 T 17-10-2018 IPR011123 Two component regulator three Y BJD13_09795 80d5b3839fe1c29fc287a6b4c834d8d1 458 SUPERFAMILY SSF53067 235 451 1.03E-22 T 17-10-2018 BJD13_09795 80d5b3839fe1c29fc287a6b4c834d8d1 458 Gene3D G3DSA:3.30.420.40 111 446 1.5E-27 T 17-10-2018 BJD13_09795 80d5b3839fe1c29fc287a6b4c834d8d1 458 Pfam PF00012 Hsp70 protein 151 277 3.6E-7 T 17-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BJD13_09795 80d5b3839fe1c29fc287a6b4c834d8d1 458 Gene3D G3DSA:3.90.640.10 269 388 1.5E-27 T 17-10-2018 BJD13_09795 80d5b3839fe1c29fc287a6b4c834d8d1 458 Gene3D G3DSA:3.30.420.40 230 435 1.5E-27 T 17-10-2018 BJD13_09795 80d5b3839fe1c29fc287a6b4c834d8d1 458 SUPERFAMILY SSF53067 2 229 7.38E-20 T 17-10-2018 BJD13_04760 bc7befe9c28cfc0f772b4bc1c0029392 200 ProSitePatterns PS00194 Thioredoxin family active site. 78 96 - T 17-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 BJD13_04760 bc7befe9c28cfc0f772b4bc1c0029392 200 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 17 185 4.6E-52 T 17-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 BJD13_04760 bc7befe9c28cfc0f772b4bc1c0029392 200 Pfam PF08534 Redoxin 49 171 1.7E-16 T 17-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 BJD13_04760 bc7befe9c28cfc0f772b4bc1c0029392 200 SUPERFAMILY SSF52833 43 183 1.11E-29 T 17-10-2018 IPR036249 Thioredoxin-like superfamily BJD13_04760 bc7befe9c28cfc0f772b4bc1c0029392 200 Gene3D G3DSA:3.40.30.10 31 192 3.6E-36 T 17-10-2018 BJD13_06370 d549555bf02bc3896b8f4eb602f56a8c 573 SMART SM00267 11 168 1.5E-7 T 17-10-2018 IPR000160 GGDEF domain BJD13_06370 d549555bf02bc3896b8f4eb602f56a8c 573 SUPERFAMILY SSF52172 445 567 2.56E-28 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_06370 d549555bf02bc3896b8f4eb602f56a8c 573 SMART SM00448 446 558 6.5E-23 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_06370 d549555bf02bc3896b8f4eb602f56a8c 573 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 29 167 1.2E-15 T 17-10-2018 IPR000160 GGDEF domain BJD13_06370 d549555bf02bc3896b8f4eb602f56a8c 573 Gene3D G3DSA:3.20.20.450 181 431 9.0E-89 T 17-10-2018 IPR035919 EAL domain superfamily BJD13_06370 d549555bf02bc3896b8f4eb602f56a8c 573 Pfam PF00072 Response regulator receiver domain 449 559 1.1E-18 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_06370 d549555bf02bc3896b8f4eb602f56a8c 573 Pfam PF00563 EAL domain 184 419 1.3E-70 T 17-10-2018 IPR001633 EAL domain BJD13_06370 d549555bf02bc3896b8f4eb602f56a8c 573 SUPERFAMILY SSF141868 185 432 6.28E-81 T 17-10-2018 IPR035919 EAL domain superfamily BJD13_06370 d549555bf02bc3896b8f4eb602f56a8c 573 Gene3D G3DSA:3.30.70.270 20 172 5.0E-27 T 17-10-2018 BJD13_06370 d549555bf02bc3896b8f4eb602f56a8c 573 SMART SM00052 178 424 2.7E-97 T 17-10-2018 IPR001633 EAL domain BJD13_06370 d549555bf02bc3896b8f4eb602f56a8c 573 Pfam PF00990 Diguanylate cyclase, GGDEF domain 27 163 4.5E-19 T 17-10-2018 IPR000160 GGDEF domain BJD13_06370 d549555bf02bc3896b8f4eb602f56a8c 573 Gene3D G3DSA:3.40.50.2300 437 573 1.9E-28 T 17-10-2018 BJD13_06370 d549555bf02bc3896b8f4eb602f56a8c 573 SUPERFAMILY SSF55073 27 169 2.35E-24 T 17-10-2018 IPR029787 Nucleotide cyclase BJD13_15085 85d0eb37b95ddfd39dcf2db600d31324 308 Gene3D G3DSA:3.40.50.1820 17 307 2.3E-40 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_15085 85d0eb37b95ddfd39dcf2db600d31324 308 SUPERFAMILY SSF53474 32 306 1.71E-38 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_15085 85d0eb37b95ddfd39dcf2db600d31324 308 Pfam PF12146 Serine aminopeptidase, S33 50 287 2.7E-24 T 17-10-2018 IPR022742 Serine aminopeptidase, S33 BJD13_23645 05165e65c71d32c804cbefb677c6a444 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 30 73 9.1E-15 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD13_23645 05165e65c71d32c804cbefb677c6a444 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 48 71 2.0E-8 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD13_23645 05165e65c71d32c804cbefb677c6a444 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 27 40 2.0E-8 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD13_23645 05165e65c71d32c804cbefb677c6a444 202 Gene3D G3DSA:1.10.357.10 26 201 1.2E-24 T 17-10-2018 BJD13_23645 05165e65c71d32c804cbefb677c6a444 202 SUPERFAMILY SSF46689 21 78 4.99E-15 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_23645 05165e65c71d32c804cbefb677c6a444 202 SUPERFAMILY SSF48498 93 192 1.09E-6 T 17-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BJD13_15370 6377a959c5643fa584425be86f399453 299 SUPERFAMILY SSF51730 17 281 4.12E-45 T 17-10-2018 IPR029041 FAD-linked oxidoreductase-like BJD13_15370 6377a959c5643fa584425be86f399453 299 Pfam PF02219 Methylenetetrahydrofolate reductase 57 224 8.2E-9 T 17-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 BJD13_15370 6377a959c5643fa584425be86f399453 299 Gene3D G3DSA:3.20.20.220 31 282 4.2E-29 T 17-10-2018 BJD13_13295 775566038f286399f6225885af943b0a 313 TIGRFAM TIGR00872 gnd_rel: 6-phosphogluconate dehydrogenase (decarboxylating) 1 299 1.1E-116 T 17-10-2018 IPR004849 6-phosphogluconate dehydrogenase, YqeC-type GO:0055114 BJD13_13295 775566038f286399f6225885af943b0a 313 SUPERFAMILY SSF48179 167 298 6.26E-41 T 17-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BJD13_13295 775566038f286399f6225885af943b0a 313 SUPERFAMILY SSF51735 1 154 5.22E-46 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_13295 775566038f286399f6225885af943b0a 313 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 169 279 4.5E-22 T 17-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BJD13_13295 775566038f286399f6225885af943b0a 313 Gene3D G3DSA:3.40.50.720 1 167 1.8E-50 T 17-10-2018 BJD13_13295 775566038f286399f6225885af943b0a 313 Gene3D G3DSA:1.10.1040.10 168 299 2.4E-52 T 17-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BJD13_13295 775566038f286399f6225885af943b0a 313 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 17-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 BJD13_13295 775566038f286399f6225885af943b0a 313 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 112 137 3.4E-38 T 17-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BJD13_13295 775566038f286399f6225885af943b0a 313 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 234 261 3.4E-38 T 17-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BJD13_13295 775566038f286399f6225885af943b0a 313 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 1 24 3.4E-38 T 17-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BJD13_13295 775566038f286399f6225885af943b0a 313 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 59 88 3.4E-38 T 17-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BJD13_13295 775566038f286399f6225885af943b0a 313 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 158 186 3.4E-38 T 17-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BJD13_13295 775566038f286399f6225885af943b0a 313 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 153 6.6E-42 T 17-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 BJD13_13295 775566038f286399f6225885af943b0a 313 SMART SM01350 169 313 1.7E-6 T 17-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BJD13_22355 0e06c3334e2c202d4b3d66211209b2d6 258 Pfam PF13531 Bacterial extracellular solute-binding protein 29 254 3.7E-46 T 17-10-2018 BJD13_22355 0e06c3334e2c202d4b3d66211209b2d6 258 SUPERFAMILY SSF53850 28 254 2.84E-65 T 17-10-2018 BJD13_22355 0e06c3334e2c202d4b3d66211209b2d6 258 Gene3D G3DSA:3.40.190.10 30 254 3.1E-89 T 17-10-2018 BJD13_22355 0e06c3334e2c202d4b3d66211209b2d6 258 PIRSF PIRSF004846 3 258 4.6E-70 T 17-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 BJD13_22355 0e06c3334e2c202d4b3d66211209b2d6 258 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 34 251 3.2E-60 T 17-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 BJD13_22355 0e06c3334e2c202d4b3d66211209b2d6 258 Gene3D G3DSA:3.40.190.10 107 218 3.1E-89 T 17-10-2018 BJD13_14650 20472eb2f1e7a8418824714b925b6c3f 356 SUPERFAMILY SSF52922 220 352 5.89E-40 T 17-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BJD13_14650 20472eb2f1e7a8418824714b925b6c3f 356 SUPERFAMILY SSF52518 33 222 3.91E-62 T 17-10-2018 IPR029061 Thiamin diphosphate-binding fold BJD13_14650 20472eb2f1e7a8418824714b925b6c3f 356 Gene3D G3DSA:3.40.50.920 222 354 2.1E-45 T 17-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BJD13_14650 20472eb2f1e7a8418824714b925b6c3f 356 Pfam PF02780 Transketolase, C-terminal domain 228 345 2.4E-38 T 17-10-2018 IPR033248 Transketolase, C-terminal domain BJD13_14650 20472eb2f1e7a8418824714b925b6c3f 356 Pfam PF02779 Transketolase, pyrimidine binding domain 33 208 6.9E-43 T 17-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BJD13_14650 20472eb2f1e7a8418824714b925b6c3f 356 Gene3D G3DSA:3.40.50.970 31 221 2.1E-71 T 17-10-2018 BJD13_14650 20472eb2f1e7a8418824714b925b6c3f 356 SMART SM00861 34 209 2.3E-58 T 17-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BJD13_19330 c983efc777e6935224da4e2aaadf0388 203 Pfam PF14470 Bacterial PH domain 28 121 1.9E-18 T 17-10-2018 IPR039519 YokE-like, PH domain BJD13_19330 c983efc777e6935224da4e2aaadf0388 203 Pfam PF09851 Short C-terminal domain 175 200 7.0E-9 T 17-10-2018 IPR018649 SHOCT domain BJD13_11880 241e7995f8e11533448e8bd7eae4ffb6 61 SUPERFAMILY SSF46561 1 59 1.7E-18 T 17-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_11880 241e7995f8e11533448e8bd7eae4ffb6 61 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 55 1.6E-20 T 17-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_11880 241e7995f8e11533448e8bd7eae4ffb6 61 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 15.164 T 17-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_11880 241e7995f8e11533448e8bd7eae4ffb6 61 Gene3D G3DSA:1.10.287.310 1 61 9.9E-24 T 17-10-2018 BJD13_11880 241e7995f8e11533448e8bd7eae4ffb6 61 Pfam PF00831 Ribosomal L29 protein 4 57 4.6E-21 T 17-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_21945 f11dae5b31eb3dc628c4acdd26e038aa 178 Pfam PF00719 Inorganic pyrophosphatase 18 174 2.8E-53 T 17-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 BJD13_21945 f11dae5b31eb3dc628c4acdd26e038aa 178 Gene3D G3DSA:3.90.80.10 1 175 1.2E-68 T 17-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 BJD13_21945 f11dae5b31eb3dc628c4acdd26e038aa 178 SUPERFAMILY SSF50324 7 174 1.44E-66 T 17-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 BJD13_21945 f11dae5b31eb3dc628c4acdd26e038aa 178 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.444 T 17-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 BJD13_22345 f463a945becafab6f20f95555cc10420 204 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 3 204 2.2E-87 T 17-10-2018 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 BJD13_22345 f463a945becafab6f20f95555cc10420 204 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD13_22345 f463a945becafab6f20f95555cc10420 204 Pfam PF00005 ABC transporter 24 157 1.5E-31 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD13_22345 f463a945becafab6f20f95555cc10420 204 SMART SM00382 22 204 3.9E-10 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_22345 f463a945becafab6f20f95555cc10420 204 SUPERFAMILY SSF52540 13 204 1.69E-56 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_22345 f463a945becafab6f20f95555cc10420 204 Gene3D G3DSA:3.40.50.300 6 204 5.0E-54 T 17-10-2018 BJD13_09400 9cd47dd912b1f077328da1961789df48 376 Pfam PF07687 Peptidase dimerisation domain 175 282 8.5E-26 T 17-10-2018 IPR011650 Peptidase M20, dimerisation domain BJD13_09400 9cd47dd912b1f077328da1961789df48 376 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 2 375 50.116 T 17-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 BJD13_09400 9cd47dd912b1f077328da1961789df48 376 SUPERFAMILY SSF55031 179 287 1.23E-28 T 17-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain BJD13_09400 9cd47dd912b1f077328da1961789df48 376 Gene3D G3DSA:3.30.70.360 179 292 8.1E-124 T 17-10-2018 BJD13_09400 9cd47dd912b1f077328da1961789df48 376 Pfam PF01546 Peptidase family M20/M25/M40 63 371 9.0E-42 T 17-10-2018 IPR002933 Peptidase M20 GO:0016787 BJD13_09400 9cd47dd912b1f077328da1961789df48 376 SUPERFAMILY SSF53187 2 373 5.76E-64 T 17-10-2018 BJD13_09400 9cd47dd912b1f077328da1961789df48 376 Gene3D G3DSA:3.40.630.10 7 361 8.1E-124 T 17-10-2018 BJD13_09400 9cd47dd912b1f077328da1961789df48 376 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 5 373 6.1E-166 T 17-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 BJD13_09400 9cd47dd912b1f077328da1961789df48 376 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 97 135 - T 17-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 BJD13_23860 c063a652d4b7ce2ad880f6c542c08a76 385 SUPERFAMILY SSF53335 1 370 6.67E-67 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_23860 c063a652d4b7ce2ad880f6c542c08a76 385 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 4 367 2.0E-40 T 17-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 BJD13_23860 c063a652d4b7ce2ad880f6c542c08a76 385 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 71 83 - T 17-10-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-4655427|Reactome: R-HSA-5334118 BJD13_23860 c063a652d4b7ce2ad880f6c542c08a76 385 Gene3D G3DSA:3.40.50.150 1 221 2.4E-46 T 17-10-2018 BJD13_23860 c063a652d4b7ce2ad880f6c542c08a76 385 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 179 192 8.4E-14 T 17-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 BJD13_23860 c063a652d4b7ce2ad880f6c542c08a76 385 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 2 18 8.4E-14 T 17-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 BJD13_23860 c063a652d4b7ce2ad880f6c542c08a76 385 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 109 123 8.4E-14 T 17-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 BJD13_23860 c063a652d4b7ce2ad880f6c542c08a76 385 Gene3D G3DSA:3.90.120.10 309 363 2.4E-11 T 17-10-2018 BJD13_23860 c063a652d4b7ce2ad880f6c542c08a76 385 Pfam PF00145 C-5 cytosine-specific DNA methylase 166 199 3.8E-5 T 17-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 BJD13_23860 c063a652d4b7ce2ad880f6c542c08a76 385 Pfam PF00145 C-5 cytosine-specific DNA methylase 317 367 4.3E-11 T 17-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 BJD13_23860 c063a652d4b7ce2ad880f6c542c08a76 385 Pfam PF00145 C-5 cytosine-specific DNA methylase 1 138 6.6E-30 T 17-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 BJD13_12075 fb84e1f559acbdd144c675c30fcdd784 568 Pfam PF13844 Glycosyl transferase family 41 367 555 2.2E-45 T 17-10-2018 IPR029489 O-GlcNAc transferase, C-terminal KEGG: 00514+2.4.1.255|MetaCyc: PWY-7437|Reactome: R-HSA-3214847|Reactome: R-HSA-5689603 BJD13_12075 fb84e1f559acbdd144c675c30fcdd784 568 Pfam PF13844 Glycosyl transferase family 41 206 357 6.3E-31 T 17-10-2018 IPR029489 O-GlcNAc transferase, C-terminal KEGG: 00514+2.4.1.255|MetaCyc: PWY-7437|Reactome: R-HSA-3214847|Reactome: R-HSA-5689603 BJD13_12075 fb84e1f559acbdd144c675c30fcdd784 568 Pfam PF14559 Tetratricopeptide repeat 68 127 4.5E-8 T 17-10-2018 BJD13_12075 fb84e1f559acbdd144c675c30fcdd784 568 Gene3D G3DSA:1.25.40.10 21 162 3.7E-36 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_12075 fb84e1f559acbdd144c675c30fcdd784 568 SUPERFAMILY SSF48452 12 150 9.6E-19 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_12075 fb84e1f559acbdd144c675c30fcdd784 568 Gene3D G3DSA:3.40.50.11380 189 549 4.1E-144 T 17-10-2018 BJD13_12075 fb84e1f559acbdd144c675c30fcdd784 568 SUPERFAMILY SSF53756 211 556 1.78E-10 T 17-10-2018 BJD13_12075 fb84e1f559acbdd144c675c30fcdd784 568 Gene3D G3DSA:3.40.50.2000 364 542 4.1E-144 T 17-10-2018 BJD13_12075 fb84e1f559acbdd144c675c30fcdd784 568 SMART SM00028 23 56 56.0 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD13_12075 fb84e1f559acbdd144c675c30fcdd784 568 SMART SM00028 57 90 5.3 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD13_12075 fb84e1f559acbdd144c675c30fcdd784 568 SMART SM00028 91 124 23.0 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD13_14175 5baec9d4a6ce8c477e97eac6e3e44f1a 546 Hamap MF_00600 60 kDa chaperonin [groL]. 2 544 41.547 T 17-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 BJD13_14175 5baec9d4a6ce8c477e97eac6e3e44f1a 546 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 17-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 BJD13_14175 5baec9d4a6ce8c477e97eac6e3e44f1a 546 Gene3D G3DSA:1.10.560.10 8 521 6.5E-239 T 17-10-2018 IPR027413 GroEL-like equatorial domain superfamily BJD13_14175 5baec9d4a6ce8c477e97eac6e3e44f1a 546 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 524 2.7E-97 T 17-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 BJD13_14175 5baec9d4a6ce8c477e97eac6e3e44f1a 546 PRINTS PR00298 60kDa chaperonin signature 398 419 1.6E-74 T 17-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 BJD13_14175 5baec9d4a6ce8c477e97eac6e3e44f1a 546 PRINTS PR00298 60kDa chaperonin signature 83 110 1.6E-74 T 17-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 BJD13_14175 5baec9d4a6ce8c477e97eac6e3e44f1a 546 PRINTS PR00298 60kDa chaperonin signature 268 291 1.6E-74 T 17-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 BJD13_14175 5baec9d4a6ce8c477e97eac6e3e44f1a 546 PRINTS PR00298 60kDa chaperonin signature 27 53 1.6E-74 T 17-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 BJD13_14175 5baec9d4a6ce8c477e97eac6e3e44f1a 546 PRINTS PR00298 60kDa chaperonin signature 350 375 1.6E-74 T 17-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 BJD13_14175 5baec9d4a6ce8c477e97eac6e3e44f1a 546 SUPERFAMILY SSF52029 184 376 5.93E-82 T 17-10-2018 IPR027409 GroEL-like apical domain superfamily BJD13_14175 5baec9d4a6ce8c477e97eac6e3e44f1a 546 SUPERFAMILY SSF48592 7 521 2.9E-79 T 17-10-2018 IPR027413 GroEL-like equatorial domain superfamily BJD13_14175 5baec9d4a6ce8c477e97eac6e3e44f1a 546 Gene3D G3DSA:3.50.7.10 173 379 6.5E-239 T 17-10-2018 IPR027409 GroEL-like apical domain superfamily BJD13_14175 5baec9d4a6ce8c477e97eac6e3e44f1a 546 SUPERFAMILY SSF54849 137 203 2.52E-24 T 17-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily BJD13_14175 5baec9d4a6ce8c477e97eac6e3e44f1a 546 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 2.5E-254 T 17-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 BJD13_14175 5baec9d4a6ce8c477e97eac6e3e44f1a 546 Gene3D G3DSA:3.30.260.10 138 410 6.5E-239 T 17-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily BJD13_14695 cb0065c2a2bded5de14b74632252ab1b 1032 SUPERFAMILY SSF82866 299 493 1.57E-34 T 17-10-2018 BJD13_14695 cb0065c2a2bded5de14b74632252ab1b 1032 SUPERFAMILY SSF82714 710 795 7.59E-14 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_14695 cb0065c2a2bded5de14b74632252ab1b 1032 Gene3D G3DSA:3.30.70.1430 558 657 5.9E-228 T 17-10-2018 BJD13_14695 cb0065c2a2bded5de14b74632252ab1b 1032 PRINTS PR00702 Acriflavin resistance protein family signature 15 39 2.4E-20 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_14695 cb0065c2a2bded5de14b74632252ab1b 1032 PRINTS PR00702 Acriflavin resistance protein family signature 467 490 2.4E-20 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_14695 cb0065c2a2bded5de14b74632252ab1b 1032 PRINTS PR00702 Acriflavin resistance protein family signature 43 61 2.4E-20 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_14695 cb0065c2a2bded5de14b74632252ab1b 1032 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 2.4E-20 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_14695 cb0065c2a2bded5de14b74632252ab1b 1032 PRINTS PR00702 Acriflavin resistance protein family signature 442 465 2.4E-20 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_14695 cb0065c2a2bded5de14b74632252ab1b 1032 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 2.4E-20 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_14695 cb0065c2a2bded5de14b74632252ab1b 1032 SUPERFAMILY SSF82866 794 1017 1.96E-41 T 17-10-2018 BJD13_14695 cb0065c2a2bded5de14b74632252ab1b 1032 Gene3D G3DSA:1.20.1640.10 507 1009 5.9E-228 T 17-10-2018 BJD13_14695 cb0065c2a2bded5de14b74632252ab1b 1032 SUPERFAMILY SSF82693 557 645 2.41E-6 T 17-10-2018 BJD13_14695 cb0065c2a2bded5de14b74632252ab1b 1032 SUPERFAMILY SSF82693 144 328 8.37E-14 T 17-10-2018 BJD13_14695 cb0065c2a2bded5de14b74632252ab1b 1032 SUPERFAMILY SSF82714 190 271 1.29E-13 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_14695 cb0065c2a2bded5de14b74632252ab1b 1032 Pfam PF00873 AcrB/AcrD/AcrF family 9 1010 3.8E-146 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_14695 cb0065c2a2bded5de14b74632252ab1b 1032 Gene3D G3DSA:3.30.70.1440 658 857 5.9E-228 T 17-10-2018 BJD13_14695 cb0065c2a2bded5de14b74632252ab1b 1032 Gene3D G3DSA:3.30.2090.10 709 797 5.9E-228 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_14695 cb0065c2a2bded5de14b74632252ab1b 1032 Gene3D G3DSA:3.30.70.1320 142 331 5.9E-228 T 17-10-2018 BJD13_14695 cb0065c2a2bded5de14b74632252ab1b 1032 Gene3D G3DSA:1.20.1640.10 18 506 5.9E-228 T 17-10-2018 BJD13_14695 cb0065c2a2bded5de14b74632252ab1b 1032 Gene3D G3DSA:3.30.2090.10 184 273 5.9E-228 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_14695 cb0065c2a2bded5de14b74632252ab1b 1032 Gene3D G3DSA:3.30.70.1430 45 805 5.9E-228 T 17-10-2018 BJD13_14695 cb0065c2a2bded5de14b74632252ab1b 1032 SUPERFAMILY SSF82693 45 140 1.55E-15 T 17-10-2018 BJD13_01965 ad9fa69f763181da13f2749cbb3d32b2 485 Pfam PF01458 Uncharacterized protein family (UPF0051) 223 456 6.8E-67 T 17-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 BJD13_01965 ad9fa69f763181da13f2749cbb3d32b2 485 SUPERFAMILY SSF101960 41 482 4.84E-137 T 17-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily BJD13_01965 ad9fa69f763181da13f2749cbb3d32b2 485 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 21 476 3.3E-193 T 17-10-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 BJD13_03295 85fc27a38f433efaf01e981b29a90ee0 349 Gene3D G3DSA:3.30.565.10 212 344 6.2E-8 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_03295 85fc27a38f433efaf01e981b29a90ee0 349 SUPERFAMILY SSF55874 223 321 1.41E-7 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_03295 85fc27a38f433efaf01e981b29a90ee0 349 Pfam PF06580 Histidine kinase 159 236 5.8E-21 T 17-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 BJD13_20140 92b81c3ee4a2135b2e787d771786d73d 187 Gene3D G3DSA:2.40.50.230 2 83 2.4E-27 T 17-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily BJD13_20140 92b81c3ee4a2135b2e787d771786d73d 187 Gene3D G3DSA:2.60.220.40 85 161 1.2E-9 T 17-10-2018 BJD13_20140 92b81c3ee4a2135b2e787d771786d73d 187 Pfam PF04717 Type VI secretion system, phage-baseplate injector 7 113 1.5E-37 T 17-10-2018 IPR006531 Gp5 N-terminal BJD13_20140 92b81c3ee4a2135b2e787d771786d73d 187 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 5 185 2.7E-57 T 17-10-2018 IPR013046 Phage baseplate assembly protein V/Gp45 BJD13_14915 00ce8f83bb268653597f39c2a9c03dea 214 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 10 29 8.7E-64 T 17-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BJD13_14915 00ce8f83bb268653597f39c2a9c03dea 214 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 29 49 8.7E-64 T 17-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BJD13_14915 00ce8f83bb268653597f39c2a9c03dea 214 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 187 212 8.7E-64 T 17-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BJD13_14915 00ce8f83bb268653597f39c2a9c03dea 214 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 163 184 8.7E-64 T 17-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BJD13_14915 00ce8f83bb268653597f39c2a9c03dea 214 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 49 68 8.7E-64 T 17-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BJD13_14915 00ce8f83bb268653597f39c2a9c03dea 214 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 142 162 8.7E-64 T 17-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BJD13_14915 00ce8f83bb268653597f39c2a9c03dea 214 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 142 157 - T 17-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BJD13_14915 00ce8f83bb268653597f39c2a9c03dea 214 Pfam PF00813 FliP family 13 209 2.7E-64 T 17-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BJD13_14915 00ce8f83bb268653597f39c2a9c03dea 214 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 190 202 - T 17-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BJD13_14915 00ce8f83bb268653597f39c2a9c03dea 214 TIGRFAM TIGR01102 yscR: type III secretion apparatus protein, YscR/HrcR family 9 209 6.5E-90 T 17-10-2018 IPR005773 Yop virulence translocation protein R GO:0015031|GO:0016021 BJD13_15950 901c077df7e8a114495b28b65988f95e 170 SUPERFAMILY SSF54611 19 150 4.14E-47 T 17-10-2018 IPR035958 SecB-like superfamily BJD13_15950 901c077df7e8a114495b28b65988f95e 170 Gene3D G3DSA:3.10.420.10 7 167 2.8E-54 T 17-10-2018 IPR035958 SecB-like superfamily BJD13_15950 901c077df7e8a114495b28b65988f95e 170 Pfam PF02556 Preprotein translocase subunit SecB 16 153 4.4E-53 T 17-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 BJD13_15950 901c077df7e8a114495b28b65988f95e 170 Hamap MF_00821 Protein-export protein SecB [secB]. 1 155 32.097 T 17-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 BJD13_15950 901c077df7e8a114495b28b65988f95e 170 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 107 129 1.4E-35 T 17-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 BJD13_15950 901c077df7e8a114495b28b65988f95e 170 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 23 40 1.4E-35 T 17-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 BJD13_15950 901c077df7e8a114495b28b65988f95e 170 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 83 103 1.4E-35 T 17-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 BJD13_15950 901c077df7e8a114495b28b65988f95e 170 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 133 151 1.4E-35 T 17-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 BJD13_15950 901c077df7e8a114495b28b65988f95e 170 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 18 153 5.8E-48 T 17-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 BJD13_02595 1ff6bacc68eff06699253a5e9de13feb 397 SMART SM00387 285 397 1.2E-30 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_02595 1ff6bacc68eff06699253a5e9de13feb 397 SMART SM00304 121 175 1.0E-8 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_02595 1ff6bacc68eff06699253a5e9de13feb 397 SUPERFAMILY SSF55874 230 395 9.95E-40 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_02595 1ff6bacc68eff06699253a5e9de13feb 397 SUPERFAMILY SSF158472 124 172 3.92E-5 T 17-10-2018 BJD13_02595 1ff6bacc68eff06699253a5e9de13feb 397 Gene3D G3DSA:1.10.287.130 119 235 1.6E-20 T 17-10-2018 BJD13_02595 1ff6bacc68eff06699253a5e9de13feb 397 Gene3D G3DSA:3.30.565.10 245 397 1.2E-33 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_02595 1ff6bacc68eff06699253a5e9de13feb 397 Pfam PF00512 His Kinase A (phospho-acceptor) domain 178 236 2.6E-10 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_02595 1ff6bacc68eff06699253a5e9de13feb 397 PRINTS PR00344 Bacterial sensor protein C-terminal signature 357 375 1.1E-11 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_02595 1ff6bacc68eff06699253a5e9de13feb 397 PRINTS PR00344 Bacterial sensor protein C-terminal signature 322 336 1.1E-11 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_02595 1ff6bacc68eff06699253a5e9de13feb 397 PRINTS PR00344 Bacterial sensor protein C-terminal signature 340 350 1.1E-11 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_02595 1ff6bacc68eff06699253a5e9de13feb 397 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 394 1.1E-11 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_02595 1ff6bacc68eff06699253a5e9de13feb 397 SUPERFAMILY SSF47384 159 241 5.3E-14 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD13_02595 1ff6bacc68eff06699253a5e9de13feb 397 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 286 395 7.8E-19 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_02595 1ff6bacc68eff06699253a5e9de13feb 397 SMART SM00388 176 240 2.7E-11 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_21630 bbc5d9581ef921b68303060532a27e8a 469 Gene3D G3DSA:3.20.20.140 97 410 9.2E-109 T 17-10-2018 BJD13_21630 bbc5d9581ef921b68303060532a27e8a 469 SUPERFAMILY SSF51556 96 413 1.02E-24 T 17-10-2018 IPR032466 Metal-dependent hydrolase BJD13_21630 bbc5d9581ef921b68303060532a27e8a 469 Pfam PF01979 Amidohydrolase family 383 430 8.5E-10 T 17-10-2018 IPR006680 Amidohydrolase-related GO:0016787 BJD13_21630 bbc5d9581ef921b68303060532a27e8a 469 SUPERFAMILY SSF51338 35 450 2.98E-24 T 17-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BJD13_21630 bbc5d9581ef921b68303060532a27e8a 469 Gene3D G3DSA:2.30.40.10 46 444 9.2E-109 T 17-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BJD13_19240 7871889591f8a2b61e3471b36021a723 374 SUPERFAMILY SSF117892 182 307 4.18E-25 T 17-10-2018 IPR036013 Band 7/SPFH domain superfamily BJD13_19240 7871889591f8a2b61e3471b36021a723 374 Gene3D G3DSA:3.30.479.30 179 303 1.5E-21 T 17-10-2018 BJD13_19240 7871889591f8a2b61e3471b36021a723 374 PRINTS PR00721 Stomatin signature 198 219 1.9E-14 T 17-10-2018 IPR001972 Stomatin family GO:0016020 BJD13_19240 7871889591f8a2b61e3471b36021a723 374 PRINTS PR00721 Stomatin signature 321 344 1.9E-14 T 17-10-2018 IPR001972 Stomatin family GO:0016020 BJD13_19240 7871889591f8a2b61e3471b36021a723 374 PRINTS PR00721 Stomatin signature 277 295 1.9E-14 T 17-10-2018 IPR001972 Stomatin family GO:0016020 BJD13_19240 7871889591f8a2b61e3471b36021a723 374 PRINTS PR00721 Stomatin signature 296 317 1.9E-14 T 17-10-2018 IPR001972 Stomatin family GO:0016020 BJD13_19240 7871889591f8a2b61e3471b36021a723 374 SMART SM00244 142 301 2.6E-16 T 17-10-2018 IPR001107 Band 7 domain BJD13_19240 7871889591f8a2b61e3471b36021a723 374 Pfam PF01145 SPFH domain / Band 7 family 147 318 1.9E-23 T 17-10-2018 IPR001107 Band 7 domain BJD13_20100 68fdb4adf3a6a9b72cc27751c383c1a9 329 Pfam PF05954 Phage late control gene D protein (GPD) 56 312 5.9E-25 T 17-10-2018 BJD13_20100 68fdb4adf3a6a9b72cc27751c383c1a9 329 SUPERFAMILY SSF69279 6 179 3.0E-27 T 17-10-2018 BJD13_08920 222684b63284bf299efe462c18820e93 468 Gene3D G3DSA:1.10.40.30 403 454 1.7E-17 T 17-10-2018 BJD13_08920 222684b63284bf299efe462c18820e93 468 PRINTS PR00145 Argininosuccinate lyase family signature 128 150 4.2E-6 T 17-10-2018 BJD13_08920 222684b63284bf299efe462c18820e93 468 PRINTS PR00145 Argininosuccinate lyase family signature 170 190 4.2E-6 T 17-10-2018 BJD13_08920 222684b63284bf299efe462c18820e93 468 PRINTS PR00145 Argininosuccinate lyase family signature 312 328 4.2E-6 T 17-10-2018 BJD13_08920 222684b63284bf299efe462c18820e93 468 PRINTS PR00149 Fumarate lyase superfamily signature 175 193 1.8E-32 T 17-10-2018 IPR000362 Fumarate lyase family BJD13_08920 222684b63284bf299efe462c18820e93 468 PRINTS PR00149 Fumarate lyase superfamily signature 266 293 1.8E-32 T 17-10-2018 IPR000362 Fumarate lyase family BJD13_08920 222684b63284bf299efe462c18820e93 468 PRINTS PR00149 Fumarate lyase superfamily signature 312 328 1.8E-32 T 17-10-2018 IPR000362 Fumarate lyase family BJD13_08920 222684b63284bf299efe462c18820e93 468 PRINTS PR00149 Fumarate lyase superfamily signature 129 147 1.8E-32 T 17-10-2018 IPR000362 Fumarate lyase family BJD13_08920 222684b63284bf299efe462c18820e93 468 SUPERFAMILY SSF48557 5 455 7.54E-142 T 17-10-2018 IPR008948 L-Aspartase-like GO:0003824 BJD13_08920 222684b63284bf299efe462c18820e93 468 Gene3D G3DSA:1.10.275.10 6 133 7.3E-51 T 17-10-2018 IPR024083 Fumarase/histidase, N-terminal BJD13_08920 222684b63284bf299efe462c18820e93 468 ProSitePatterns PS00163 Fumarate lyases signature. 312 321 - T 17-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 BJD13_08920 222684b63284bf299efe462c18820e93 468 Pfam PF00206 Lyase 13 337 1.5E-98 T 17-10-2018 IPR022761 Fumarate lyase, N-terminal BJD13_08920 222684b63284bf299efe462c18820e93 468 Pfam PF10415 Fumarase C C-terminus 403 456 1.6E-18 T 17-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BJD13_08920 222684b63284bf299efe462c18820e93 468 Hamap MF_00743 Fumarate hydratase class II [fumC]. 5 457 78.842 T 17-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BJD13_08920 222684b63284bf299efe462c18820e93 468 Gene3D G3DSA:1.20.200.10 134 400 8.5E-103 T 17-10-2018 BJD13_04560 f32ee4f84e6807340794d36de6067196 162 SUPERFAMILY SSF50475 6 135 3.49E-24 T 17-10-2018 BJD13_04560 f32ee4f84e6807340794d36de6067196 162 Pfam PF16242 Pyridoxamine 5'-phosphate oxidase like 8 141 2.0E-30 T 17-10-2018 IPR038725 General stress protein, FMN-binding split barrel domain BJD13_04560 f32ee4f84e6807340794d36de6067196 162 Gene3D G3DSA:2.30.110.10 1 146 2.2E-44 T 17-10-2018 IPR012349 FMN-binding split barrel GO:0048037 BJD13_17230 2ab01fbb2e30123c43a3c1b8e74bbc13 96 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 6 82 1.8E-30 T 17-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 BJD13_17230 2ab01fbb2e30123c43a3c1b8e74bbc13 96 Pfam PF01381 Helix-turn-helix 14 66 1.5E-12 T 17-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BJD13_17230 2ab01fbb2e30123c43a3c1b8e74bbc13 96 SUPERFAMILY SSF47413 8 87 4.22E-25 T 17-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BJD13_17230 2ab01fbb2e30123c43a3c1b8e74bbc13 96 SMART SM00530 13 68 3.7E-10 T 17-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BJD13_17230 2ab01fbb2e30123c43a3c1b8e74bbc13 96 Gene3D G3DSA:1.10.260.40 3 94 1.9E-30 T 17-10-2018 BJD13_19950 7bc37b36dbc917dc3808a8823bbecbf8 274 Pfam PF00535 Glycosyl transferase family 2 14 132 5.7E-16 T 17-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BJD13_19950 7bc37b36dbc917dc3808a8823bbecbf8 274 SUPERFAMILY SSF53448 6 157 2.67E-23 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD13_19950 7bc37b36dbc917dc3808a8823bbecbf8 274 Gene3D G3DSA:3.90.550.10 1 235 4.2E-25 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD13_04055 93994de1d0d8cd94fff305c8e9d44c8e 434 Pfam PF04286 Protein of unknown function (DUF445) 55 431 5.8E-105 T 17-10-2018 IPR007383 Protein of unknown function DUF445 BJD13_17200 6a09a5c993786fe3d0b94c95400fe859 181 Pfam PF07484 Phage Tail Collar Domain 7 63 1.4E-22 T 17-10-2018 IPR011083 Phage tail collar domain BJD13_17200 6a09a5c993786fe3d0b94c95400fe859 181 SUPERFAMILY SSF88874 1 175 5.58E-44 T 17-10-2018 BJD13_17200 6a09a5c993786fe3d0b94c95400fe859 181 Gene3D G3DSA:3.90.1340.10 1 59 1.7E-12 T 17-10-2018 IPR037053 Phage tail collar domain superfamily BJD13_23580 5dd66f790ee122768015e630b17c3814 266 Gene3D G3DSA:3.40.190.80 155 257 1.5E-30 T 17-10-2018 BJD13_23580 5dd66f790ee122768015e630b17c3814 266 Gene3D G3DSA:3.30.540.10 6 154 4.8E-46 T 17-10-2018 BJD13_23580 5dd66f790ee122768015e630b17c3814 266 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 213 227 - T 17-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 BJD13_23580 5dd66f790ee122768015e630b17c3814 266 SUPERFAMILY SSF56655 6 258 5.89E-75 T 17-10-2018 BJD13_23580 5dd66f790ee122768015e630b17c3814 266 Pfam PF00459 Inositol monophosphatase family 8 244 1.2E-48 T 17-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BJD13_23580 5dd66f790ee122768015e630b17c3814 266 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 10 254 4.8E-94 T 17-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 BJD13_23580 5dd66f790ee122768015e630b17c3814 266 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 86 99 - T 17-10-2018 IPR020583 Inositol monophosphatase, metal-binding site BJD13_23580 5dd66f790ee122768015e630b17c3814 266 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 8 256 41.88 T 17-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 BJD13_23580 5dd66f790ee122768015e630b17c3814 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 86 102 5.6E-7 T 17-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BJD13_23580 5dd66f790ee122768015e630b17c3814 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 40 60 5.6E-7 T 17-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BJD13_23580 5dd66f790ee122768015e630b17c3814 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 62 78 5.6E-7 T 17-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BJD13_20165 fb84d4578a685b68de31dd148c7f5306 296 Pfam PF04865 Baseplate J-like protein 113 255 5.7E-25 T 17-10-2018 IPR006949 Baseplate protein J-like BJD13_20165 fb84d4578a685b68de31dd148c7f5306 296 PIRSF PIRSF020481 4 296 9.1E-117 T 17-10-2018 IPR014507 Baseplate assembly protein J, predicted BJD13_19930 358d4748273b4e5714e9bce1a63ebc94 307 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 1 301 1.1E-90 T 17-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 BJD13_19930 358d4748273b4e5714e9bce1a63ebc94 307 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 131 154 - T 17-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BJD13_19930 358d4748273b4e5714e9bce1a63ebc94 307 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 303 36.151 T 17-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 BJD13_19930 358d4748273b4e5714e9bce1a63ebc94 307 Pfam PF00551 Formyl transferase 1 176 1.4E-42 T 17-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BJD13_19930 358d4748273b4e5714e9bce1a63ebc94 307 Pfam PF02911 Formyl transferase, C-terminal domain 203 299 6.1E-27 T 17-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BJD13_19930 358d4748273b4e5714e9bce1a63ebc94 307 Gene3D G3DSA:3.40.50.170 1 205 1.6E-75 T 17-10-2018 BJD13_19930 358d4748273b4e5714e9bce1a63ebc94 307 SUPERFAMILY SSF53328 1 206 1.83E-63 T 17-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BJD13_19930 358d4748273b4e5714e9bce1a63ebc94 307 Gene3D G3DSA:3.10.25.10 206 305 2.1E-28 T 17-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BJD13_19930 358d4748273b4e5714e9bce1a63ebc94 307 SUPERFAMILY SSF50486 204 304 7.65E-31 T 17-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 BJD13_07905 1d63423c59d58075756fe2e1a91390b8 213 Gene3D G3DSA:1.10.10.10 1 68 3.5E-22 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_07905 1d63423c59d58075756fe2e1a91390b8 213 SUPERFAMILY SSF51306 88 210 5.58E-33 T 17-10-2018 IPR036286 LexA/Signal peptidase-like superfamily BJD13_07905 1d63423c59d58075756fe2e1a91390b8 213 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 125 135 1.5E-8 T 17-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 BJD13_07905 1d63423c59d58075756fe2e1a91390b8 213 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 164 176 1.5E-8 T 17-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 BJD13_07905 1d63423c59d58075756fe2e1a91390b8 213 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 136 147 1.5E-8 T 17-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 BJD13_07905 1d63423c59d58075756fe2e1a91390b8 213 Pfam PF00717 Peptidase S24-like 128 193 2.7E-14 T 17-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C BJD13_07905 1d63423c59d58075756fe2e1a91390b8 213 TIGRFAM TIGR00498 lexA: repressor LexA 2 211 2.0E-52 T 17-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 BJD13_07905 1d63423c59d58075756fe2e1a91390b8 213 Gene3D G3DSA:2.10.109.10 94 212 1.2E-34 T 17-10-2018 BJD13_07905 1d63423c59d58075756fe2e1a91390b8 213 Hamap MF_00015 LexA repressor [lexA]. 2 212 29.609 T 17-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 BJD13_07905 1d63423c59d58075756fe2e1a91390b8 213 SUPERFAMILY SSF46785 1 68 1.44E-17 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_07905 1d63423c59d58075756fe2e1a91390b8 213 Pfam PF01726 LexA DNA binding domain 2 64 1.6E-18 T 17-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 BJD13_11905 9b2357ddb7420fb81b1a55eba8fe2505 275 PIRSF PIRSF002158 6 275 1.6E-97 T 17-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_11905 9b2357ddb7420fb81b1a55eba8fe2505 275 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 4 274 6.3E-131 T 17-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 BJD13_11905 9b2357ddb7420fb81b1a55eba8fe2505 275 Gene3D G3DSA:4.10.950.10 196 274 5.2E-34 T 17-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_11905 9b2357ddb7420fb81b1a55eba8fe2505 275 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 2.4E-34 T 17-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_11905 9b2357ddb7420fb81b1a55eba8fe2505 275 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 274 47.199 T 17-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 BJD13_11905 9b2357ddb7420fb81b1a55eba8fe2505 275 Gene3D G3DSA:2.30.30.30 115 195 1.6E-30 T 17-10-2018 IPR014722 Ribosomal protein L2, domain 2 BJD13_11905 9b2357ddb7420fb81b1a55eba8fe2505 275 SMART SM01382 124 253 4.3E-87 T 17-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 BJD13_11905 9b2357ddb7420fb81b1a55eba8fe2505 275 Gene3D G3DSA:2.40.50.140 1 114 2.0E-48 T 17-10-2018 BJD13_11905 9b2357ddb7420fb81b1a55eba8fe2505 275 SMART SM01383 42 118 6.6E-44 T 17-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_11905 9b2357ddb7420fb81b1a55eba8fe2505 275 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 251 2.7E-53 T 17-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 BJD13_11905 9b2357ddb7420fb81b1a55eba8fe2505 275 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 17-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_11905 9b2357ddb7420fb81b1a55eba8fe2505 275 SUPERFAMILY SSF50104 127 273 8.42E-57 T 17-10-2018 IPR008991 Translation protein SH3-like domain superfamily BJD13_11905 9b2357ddb7420fb81b1a55eba8fe2505 275 SUPERFAMILY SSF50249 3 125 3.05E-48 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD13_06845 7ec19b467d10930f7e80e0f03cf832a4 790 Gene3D G3DSA:1.10.287.950 435 736 3.0E-83 T 17-10-2018 BJD13_06845 7ec19b467d10930f7e80e0f03cf832a4 790 SMART SM00283 487 734 4.2E-88 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD13_06845 7ec19b467d10930f7e80e0f03cf832a4 790 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 547 701 9.4E-53 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD13_06845 7ec19b467d10930f7e80e0f03cf832a4 790 SUPERFAMILY SSF55785 255 382 3.62E-8 T 17-10-2018 IPR035965 PAS domain superfamily BJD13_06845 7ec19b467d10930f7e80e0f03cf832a4 790 SUPERFAMILY SSF58104 454 735 2.35E-69 T 17-10-2018 BJD13_06845 7ec19b467d10930f7e80e0f03cf832a4 790 Gene3D G3DSA:3.30.450.20 267 390 2.4E-25 T 17-10-2018 BJD13_10365 0333db254dd6ee8056bfe5aab3af20e1 172 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 102 117 6.3E-16 T 17-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 BJD13_10365 0333db254dd6ee8056bfe5aab3af20e1 172 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 54 62 6.3E-16 T 17-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 BJD13_10365 0333db254dd6ee8056bfe5aab3af20e1 172 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 138 154 6.3E-16 T 17-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 BJD13_10365 0333db254dd6ee8056bfe5aab3af20e1 172 Pfam PF01252 Signal peptidase (SPase) II 16 157 1.0E-35 T 17-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 BJD13_10365 0333db254dd6ee8056bfe5aab3af20e1 172 ProSitePatterns PS00855 Signal peptidases II signature. 105 117 - T 17-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 BJD13_10365 0333db254dd6ee8056bfe5aab3af20e1 172 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 7 163 16.155 T 17-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 BJD13_10365 0333db254dd6ee8056bfe5aab3af20e1 172 TIGRFAM TIGR00077 lspA: signal peptidase II 10 163 6.8E-41 T 17-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 BJD13_01440 24677f6e72761726f7679b95c4f8a2e1 196 SUPERFAMILY SSF53955 11 134 2.61E-19 T 17-10-2018 IPR023346 Lysozyme-like domain superfamily BJD13_01440 24677f6e72761726f7679b95c4f8a2e1 196 Gene3D G3DSA:1.10.530.10 5 146 1.4E-18 T 17-10-2018 BJD13_01440 24677f6e72761726f7679b95c4f8a2e1 196 Pfam PF01464 Transglycosylase SLT domain 11 144 1.8E-20 T 17-10-2018 IPR008258 Transglycosylase SLT domain 1 BJD13_17610 5bd05305fb85b7993121b3f8f0b4412b 350 Pfam PF13377 Periplasmic binding protein-like domain 177 342 1.3E-33 T 17-10-2018 BJD13_17610 5bd05305fb85b7993121b3f8f0b4412b 350 Gene3D G3DSA:3.40.50.2300 65 311 3.8E-79 T 17-10-2018 BJD13_17610 5bd05305fb85b7993121b3f8f0b4412b 350 Gene3D G3DSA:1.10.260.40 10 64 2.0E-22 T 17-10-2018 BJD13_17610 5bd05305fb85b7993121b3f8f0b4412b 350 Gene3D G3DSA:3.40.50.2300 169 295 3.8E-79 T 17-10-2018 BJD13_17610 5bd05305fb85b7993121b3f8f0b4412b 350 SUPERFAMILY SSF53822 70 343 3.93E-70 T 17-10-2018 IPR028082 Periplasmic binding protein-like I BJD13_17610 5bd05305fb85b7993121b3f8f0b4412b 350 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 22 32 4.9E-5 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD13_17610 5bd05305fb85b7993121b3f8f0b4412b 350 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 12 22 4.9E-5 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD13_17610 5bd05305fb85b7993121b3f8f0b4412b 350 SMART SM00354 10 80 4.1E-29 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD13_17610 5bd05305fb85b7993121b3f8f0b4412b 350 SUPERFAMILY SSF47413 11 68 3.19E-17 T 17-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BJD13_17610 5bd05305fb85b7993121b3f8f0b4412b 350 Pfam PF00356 Bacterial regulatory proteins, lacI family 12 56 9.4E-18 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD13_10530 b367ee6b97322410c0bc121323b9041c 248 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 8 111 6.4E-19 T 17-10-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 BJD13_10530 b367ee6b97322410c0bc121323b9041c 248 Gene3D G3DSA:3.30.750.120 8 120 1.2E-7 T 17-10-2018 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily BJD13_10530 b367ee6b97322410c0bc121323b9041c 248 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 11 248 26.415 T 17-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 BJD13_10530 b367ee6b97322410c0bc121323b9041c 248 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 12 247 6.6E-69 T 17-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 BJD13_10530 b367ee6b97322410c0bc121323b9041c 248 Gene3D G3DSA:2.160.20.70 142 248 3.9E-29 T 17-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 BJD13_10530 b367ee6b97322410c0bc121323b9041c 248 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 146 244 4.6E-30 T 17-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 BJD13_10530 b367ee6b97322410c0bc121323b9041c 248 SUPERFAMILY SSF63848 144 247 1.29E-29 T 17-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 BJD13_12235 c5032183e352a36bc03f25d86cde77ef 286 Gene3D G3DSA:1.10.8.10 9 86 1.6E-19 T 17-10-2018 BJD13_12235 c5032183e352a36bc03f25d86cde77ef 286 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 5 278 45.1 T 17-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 BJD13_12235 c5032183e352a36bc03f25d86cde77ef 286 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 183 189 - T 17-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 BJD13_12235 c5032183e352a36bc03f25d86cde77ef 286 Pfam PF05175 Methyltransferase small domain 103 194 2.3E-17 T 17-10-2018 IPR007848 Methyltransferase small domain GO:0008168 BJD13_12235 c5032183e352a36bc03f25d86cde77ef 286 SUPERFAMILY SSF53335 21 276 9.71E-60 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_12235 c5032183e352a36bc03f25d86cde77ef 286 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 25 274 1.5E-91 T 17-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 BJD13_12235 c5032183e352a36bc03f25d86cde77ef 286 Gene3D G3DSA:3.40.50.150 87 279 3.3E-62 T 17-10-2018 BJD13_12235 c5032183e352a36bc03f25d86cde77ef 286 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 17 279 1.3E-74 T 17-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 BJD13_21215 a954ab611b0e704f4347bbee9d3e77e6 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 378 5.8E-100 T 17-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 BJD13_21215 a954ab611b0e704f4347bbee9d3e77e6 388 PIRSF PIRSF500134 1 343 2.9E-119 T 17-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 BJD13_21215 a954ab611b0e704f4347bbee9d3e77e6 388 PIRSF PIRSF500134 338 388 0.04 T 17-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 BJD13_21215 a954ab611b0e704f4347bbee9d3e77e6 388 SMART SM00984 300 387 1.5E-13 T 17-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BJD13_21215 a954ab611b0e704f4347bbee9d3e77e6 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 1.2E-26 T 17-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BJD13_21215 a954ab611b0e704f4347bbee9d3e77e6 388 SUPERFAMILY SSF52413 283 387 9.16E-27 T 17-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 BJD13_21215 a954ab611b0e704f4347bbee9d3e77e6 388 SUPERFAMILY SSF48179 191 287 4.76E-30 T 17-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BJD13_21215 a954ab611b0e704f4347bbee9d3e77e6 388 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 301 374 2.0E-7 T 17-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BJD13_21215 a954ab611b0e704f4347bbee9d3e77e6 388 SUPERFAMILY SSF51735 1 194 3.87E-46 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_21215 a954ab611b0e704f4347bbee9d3e77e6 388 Gene3D G3DSA:3.40.50.720 222 388 6.9E-68 T 17-10-2018 BJD13_21215 a954ab611b0e704f4347bbee9d3e77e6 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 169 1.5E-31 T 17-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BJD13_21215 a954ab611b0e704f4347bbee9d3e77e6 388 Gene3D G3DSA:1.20.5.100 194 220 1.4E-19 T 17-10-2018 BJD13_21215 a954ab611b0e704f4347bbee9d3e77e6 388 PIRSF PIRSF000124 1 388 9.4E-137 T 17-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 BJD13_21215 a954ab611b0e704f4347bbee9d3e77e6 388 Gene3D G3DSA:3.40.50.720 1 193 4.7E-57 T 17-10-2018 BJD13_03495 50eac7f8aed30f3f75e032fa88128289 541 SUPERFAMILY SSF51445 15 431 2.26E-70 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily BJD13_03495 50eac7f8aed30f3f75e032fa88128289 541 Pfam PF00128 Alpha amylase, catalytic domain 67 388 7.2E-42 T 17-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BJD13_03495 50eac7f8aed30f3f75e032fa88128289 541 Gene3D G3DSA:3.20.20.80 13 426 1.5E-90 T 17-10-2018 BJD13_03495 50eac7f8aed30f3f75e032fa88128289 541 SMART SM00642 23 406 5.3E-29 T 17-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BJD13_03495 50eac7f8aed30f3f75e032fa88128289 541 SUPERFAMILY SSF51011 442 511 2.7E-5 T 17-10-2018 BJD13_03725 d2c991d8fb42b0e6c043ce12cc8acda9 235 Pfam PF12833 Helix-turn-helix domain 153 230 1.2E-23 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD13_03725 d2c991d8fb42b0e6c043ce12cc8acda9 235 SUPERFAMILY SSF46689 130 180 7.77E-9 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_03725 d2c991d8fb42b0e6c043ce12cc8acda9 235 Gene3D G3DSA:3.30.450.20 7 132 6.8E-14 T 17-10-2018 BJD13_03725 d2c991d8fb42b0e6c043ce12cc8acda9 235 SMART SM00342 147 229 1.1E-26 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD13_03725 d2c991d8fb42b0e6c043ce12cc8acda9 235 SUPERFAMILY SSF55785 10 119 4.89E-11 T 17-10-2018 IPR035965 PAS domain superfamily BJD13_03725 d2c991d8fb42b0e6c043ce12cc8acda9 235 Pfam PF08448 PAS fold 14 122 8.1E-20 T 17-10-2018 IPR013656 PAS fold-4 BJD13_03725 d2c991d8fb42b0e6c043ce12cc8acda9 235 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 184 225 - T 17-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 BJD13_03725 d2c991d8fb42b0e6c043ce12cc8acda9 235 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 198 213 2.1E-6 T 17-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BJD13_03725 d2c991d8fb42b0e6c043ce12cc8acda9 235 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 213 229 2.1E-6 T 17-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BJD13_03725 d2c991d8fb42b0e6c043ce12cc8acda9 235 SUPERFAMILY SSF46689 184 230 3.36E-11 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_03725 d2c991d8fb42b0e6c043ce12cc8acda9 235 Gene3D G3DSA:1.10.10.60 133 233 5.6E-30 T 17-10-2018 BJD13_11425 e727d6c78f3248af5b40682c0dd101f5 234 SMART SM00332 3 231 3.0E-18 T 17-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BJD13_11425 e727d6c78f3248af5b40682c0dd101f5 234 Gene3D G3DSA:3.60.40.10 1 233 6.6E-63 T 17-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BJD13_11425 e727d6c78f3248af5b40682c0dd101f5 234 SUPERFAMILY SSF81606 2 232 3.14E-62 T 17-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BJD13_11425 e727d6c78f3248af5b40682c0dd101f5 234 Pfam PF13672 Protein phosphatase 2C 17 193 3.5E-13 T 17-10-2018 BJD13_11425 e727d6c78f3248af5b40682c0dd101f5 234 SMART SM00331 8 233 2.6E-28 T 17-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BJD13_01815 530f92c01d70e31836044afcbc6089f1 424 Gene3D G3DSA:3.65.10.10 21 235 2.9E-169 T 17-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 BJD13_01815 530f92c01d70e31836044afcbc6089f1 424 SUPERFAMILY SSF55205 1 422 4.91E-143 T 17-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 BJD13_01815 530f92c01d70e31836044afcbc6089f1 424 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 423 45.405 T 17-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BJD13_01815 530f92c01d70e31836044afcbc6089f1 424 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 422 2.7E-177 T 17-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BJD13_01815 530f92c01d70e31836044afcbc6089f1 424 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 6 413 3.8E-113 T 17-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 BJD13_01815 530f92c01d70e31836044afcbc6089f1 424 Gene3D G3DSA:3.65.10.10 6 420 2.9E-169 T 17-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 BJD13_10455 e078e112a3e41e579fc4f3db41071c84 443 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 76 433 9.2E-28 T 17-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase BJD13_10455 e078e112a3e41e579fc4f3db41071c84 443 Gene3D G3DSA:3.60.10.10 71 442 2.5E-20 T 17-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BJD13_10455 e078e112a3e41e579fc4f3db41071c84 443 SUPERFAMILY SSF56219 72 440 1.44E-20 T 17-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BJD13_21675 f7eeaa8c7b3caacc75a910e4f5498ea2 420 SMART SM01154 40 409 1.6E-148 T 17-10-2018 IPR012548 Protein of unknown function DUF1704 BJD13_21675 f7eeaa8c7b3caacc75a910e4f5498ea2 420 TIGRFAM TIGR02421 QEGLA: conserved hypothetical protein 20 402 6.5E-125 T 17-10-2018 IPR012656 Conserved hypothetical protein CHP02421, QEGLA BJD13_21675 f7eeaa8c7b3caacc75a910e4f5498ea2 420 Pfam PF08014 Domain of unknown function (DUF1704) 48 406 1.8E-120 T 17-10-2018 IPR012548 Protein of unknown function DUF1704 BJD13_20625 79f9349dfd5111c474c3acdabaf434dc 414 Pfam PF04055 Radical SAM superfamily 62 239 2.3E-7 T 17-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BJD13_20625 79f9349dfd5111c474c3acdabaf434dc 414 SMART SM00729 56 287 0.0085 T 17-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 BJD13_20625 79f9349dfd5111c474c3acdabaf434dc 414 SUPERFAMILY SSF47781 310 382 9.45E-8 T 17-10-2018 IPR010994 RuvA domain 2-like BJD13_20625 79f9349dfd5111c474c3acdabaf434dc 414 TIGRFAM TIGR03916 rSAM_link_UDG: putative DNA modification/repair radical SAM protein 3 404 2.5E-168 T 17-10-2018 IPR023874 DNA modification/repair radical SAM protein, putative BJD13_20625 79f9349dfd5111c474c3acdabaf434dc 414 SUPERFAMILY SSF102114 45 184 2.09E-15 T 17-10-2018 BJD13_20625 79f9349dfd5111c474c3acdabaf434dc 414 Gene3D G3DSA:3.20.20.70 51 187 6.6E-9 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD13_20930 1aec7233d6aa50763d88c5ca1f0c8dab 127 Pfam PF04138 GtrA-like protein 9 126 3.7E-16 T 17-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 BJD13_05570 df8ce36d119973b0acd10ac7275db66b 213 SUPERFAMILY SSF46689 14 77 7.48E-16 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_05570 df8ce36d119973b0acd10ac7275db66b 213 Gene3D G3DSA:1.10.357.10 14 206 1.1E-38 T 17-10-2018 BJD13_05570 df8ce36d119973b0acd10ac7275db66b 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 25 38 3.2E-9 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD13_05570 df8ce36d119973b0acd10ac7275db66b 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 46 69 3.2E-9 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD13_05570 df8ce36d119973b0acd10ac7275db66b 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 71 1.3E-14 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD13_22250 3b726acf0bea8d6e05ed7ecfb26b043d 624 SMART SM00965 211 259 2.0E-10 T 17-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 BJD13_22250 3b726acf0bea8d6e05ed7ecfb26b043d 624 PRINTS PR00811 Bacterial general secretion pathway protein D signature 582 600 3.7E-18 T 17-10-2018 IPR001775 GspD/PilQ family BJD13_22250 3b726acf0bea8d6e05ed7ecfb26b043d 624 PRINTS PR00811 Bacterial general secretion pathway protein D signature 366 376 3.7E-18 T 17-10-2018 IPR001775 GspD/PilQ family BJD13_22250 3b726acf0bea8d6e05ed7ecfb26b043d 624 PRINTS PR00811 Bacterial general secretion pathway protein D signature 449 473 3.7E-18 T 17-10-2018 IPR001775 GspD/PilQ family BJD13_22250 3b726acf0bea8d6e05ed7ecfb26b043d 624 PRINTS PR00811 Bacterial general secretion pathway protein D signature 605 619 3.7E-18 T 17-10-2018 IPR001775 GspD/PilQ family BJD13_22250 3b726acf0bea8d6e05ed7ecfb26b043d 624 Gene3D G3DSA:3.55.50.30 169 283 7.7E-39 T 17-10-2018 BJD13_22250 3b726acf0bea8d6e05ed7ecfb26b043d 624 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 186 617 1.3E-156 T 17-10-2018 IPR013355 Type IV pilus secretin PilQ BJD13_22250 3b726acf0bea8d6e05ed7ecfb26b043d 624 Gene3D G3DSA:2.60.40.3470 29 160 5.3E-35 T 17-10-2018 BJD13_22250 3b726acf0bea8d6e05ed7ecfb26b043d 624 Gene3D G3DSA:3.30.1370.120 284 365 1.1E-9 T 17-10-2018 IPR038591 NolW-like superfamily BJD13_22250 3b726acf0bea8d6e05ed7ecfb26b043d 624 Pfam PF00263 Bacterial type II and III secretion system protein 453 618 9.7E-50 T 17-10-2018 IPR004846 Type II/III secretion system GO:0009306 BJD13_22250 3b726acf0bea8d6e05ed7ecfb26b043d 624 Pfam PF03958 Bacterial type II/III secretion system short domain 286 366 4.9E-14 T 17-10-2018 IPR005644 NolW-like BJD13_22250 3b726acf0bea8d6e05ed7ecfb26b043d 624 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 563 596 - T 17-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 BJD13_22250 3b726acf0bea8d6e05ed7ecfb26b043d 624 Pfam PF07660 Secretin and TonB N terminus short domain 212 258 2.5E-8 T 17-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 BJD13_09440 cf6a1afc1fa16ebfde4252ef73542c96 344 SMART SM00972 283 341 8.9E-20 T 17-10-2018 IPR007893 Spore coat protein U BJD13_09440 cf6a1afc1fa16ebfde4252ef73542c96 344 SMART SM00972 103 172 1.4E-11 T 17-10-2018 IPR007893 Spore coat protein U BJD13_09440 cf6a1afc1fa16ebfde4252ef73542c96 344 Pfam PF05229 Spore Coat Protein U domain 210 340 1.9E-33 T 17-10-2018 IPR007893 Spore coat protein U BJD13_09440 cf6a1afc1fa16ebfde4252ef73542c96 344 Pfam PF05229 Spore Coat Protein U domain 26 167 1.5E-17 T 17-10-2018 IPR007893 Spore coat protein U BJD13_13070 5f1e5cc7f82ee86f80ab3da8d55b253f 259 Pfam PF00072 Response regulator receiver domain 28 138 1.6E-28 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_13070 5f1e5cc7f82ee86f80ab3da8d55b253f 259 SMART SM00448 26 137 5.3E-39 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_13070 5f1e5cc7f82ee86f80ab3da8d55b253f 259 Gene3D G3DSA:3.40.50.2300 19 154 9.3E-38 T 17-10-2018 BJD13_13070 5f1e5cc7f82ee86f80ab3da8d55b253f 259 SUPERFAMILY SSF52172 17 157 1.85E-41 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_13070 5f1e5cc7f82ee86f80ab3da8d55b253f 259 SMART SM00862 177 252 9.9E-22 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD13_13070 5f1e5cc7f82ee86f80ab3da8d55b253f 259 SUPERFAMILY SSF46894 151 253 9.35E-25 T 17-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BJD13_13070 5f1e5cc7f82ee86f80ab3da8d55b253f 259 Pfam PF00486 Transcriptional regulatory protein, C terminal 180 252 4.1E-22 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD13_13070 5f1e5cc7f82ee86f80ab3da8d55b253f 259 Gene3D G3DSA:1.10.10.10 155 258 9.8E-28 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_04835 b2831923ed348295c0221fe1fbf416ee 89 SUPERFAMILY SSF82657 2 87 6.54E-25 T 17-10-2018 IPR036065 BolA-like superfamily BJD13_04835 b2831923ed348295c0221fe1fbf416ee 89 Gene3D G3DSA:3.30.300.90 1 89 1.8E-29 T 17-10-2018 BJD13_04835 b2831923ed348295c0221fe1fbf416ee 89 Pfam PF01722 BolA-like protein 11 87 6.4E-28 T 17-10-2018 IPR002634 BolA protein BJD13_04835 b2831923ed348295c0221fe1fbf416ee 89 PIRSF PIRSF003113 1 89 6.1E-26 T 17-10-2018 IPR002634 BolA protein BJD13_21970 a92546796f1c6d994030282389705d6e 187 Gene3D G3DSA:3.40.50.300 1 187 1.4E-65 T 17-10-2018 BJD13_21970 a92546796f1c6d994030282389705d6e 187 SUPERFAMILY SSF52540 1 186 3.18E-40 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_21970 a92546796f1c6d994030282389705d6e 187 Hamap MF_00235 Adenylate kinase [adk]. 1 186 47.271 T 17-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 BJD13_21970 a92546796f1c6d994030282389705d6e 187 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 17-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 BJD13_21970 a92546796f1c6d994030282389705d6e 187 Pfam PF00406 Adenylate kinase 5 163 3.3E-56 T 17-10-2018 BJD13_21970 a92546796f1c6d994030282389705d6e 187 PRINTS PR00094 Adenylate kinase signature 133 148 2.8E-36 T 17-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 BJD13_21970 a92546796f1c6d994030282389705d6e 187 PRINTS PR00094 Adenylate kinase signature 4 17 2.8E-36 T 17-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 BJD13_21970 a92546796f1c6d994030282389705d6e 187 PRINTS PR00094 Adenylate kinase signature 81 97 2.8E-36 T 17-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 BJD13_21970 a92546796f1c6d994030282389705d6e 187 PRINTS PR00094 Adenylate kinase signature 32 46 2.8E-36 T 17-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 BJD13_21970 a92546796f1c6d994030282389705d6e 187 PRINTS PR00094 Adenylate kinase signature 150 164 2.8E-36 T 17-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 BJD13_07125 8b67bf3d884c251adcc039e78721f236 472 Gene3D G3DSA:3.30.465.10 95 214 1.3E-40 T 17-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 BJD13_07125 8b67bf3d884c251adcc039e78721f236 472 Pfam PF02913 FAD linked oxidases, C-terminal domain 218 459 6.2E-55 T 17-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 BJD13_07125 8b67bf3d884c251adcc039e78721f236 472 Gene3D G3DSA:3.30.43.10 1 92 3.1E-26 T 17-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 BJD13_07125 8b67bf3d884c251adcc039e78721f236 472 Gene3D G3DSA:3.30.70.2190 216 332 1.4E-26 T 17-10-2018 BJD13_07125 8b67bf3d884c251adcc039e78721f236 472 Gene3D G3DSA:3.30.70.2740 334 419 1.8E-26 T 17-10-2018 BJD13_07125 8b67bf3d884c251adcc039e78721f236 472 Gene3D G3DSA:1.10.45.10 420 459 6.4E-14 T 17-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 BJD13_07125 8b67bf3d884c251adcc039e78721f236 472 Pfam PF01565 FAD binding domain 40 178 4.7E-39 T 17-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 BJD13_07125 8b67bf3d884c251adcc039e78721f236 472 SUPERFAMILY SSF55103 189 461 1.47E-56 T 17-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 BJD13_07125 8b67bf3d884c251adcc039e78721f236 472 SUPERFAMILY SSF56176 8 216 2.13E-68 T 17-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 BJD13_20865 9e64cda96fb2a4e53ffa8a5b35ea120e 607 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 17-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 BJD13_20865 9e64cda96fb2a4e53ffa8a5b35ea120e 607 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 307 325 1.0E-39 T 17-10-2018 BJD13_20865 9e64cda96fb2a4e53ffa8a5b35ea120e 607 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 157 1.0E-39 T 17-10-2018 BJD13_20865 9e64cda96fb2a4e53ffa8a5b35ea120e 607 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 428 450 1.0E-39 T 17-10-2018 BJD13_20865 9e64cda96fb2a4e53ffa8a5b35ea120e 607 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 399 415 1.0E-39 T 17-10-2018 BJD13_20865 9e64cda96fb2a4e53ffa8a5b35ea120e 607 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 268 286 1.0E-39 T 17-10-2018 BJD13_20865 9e64cda96fb2a4e53ffa8a5b35ea120e 607 Gene3D G3DSA:3.50.50.60 138 468 9.1E-118 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_20865 9e64cda96fb2a4e53ffa8a5b35ea120e 607 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 137 463 1.1E-67 T 17-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BJD13_20865 9e64cda96fb2a4e53ffa8a5b35ea120e 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 170 185 3.8E-69 T 17-10-2018 BJD13_20865 9e64cda96fb2a4e53ffa8a5b35ea120e 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 543 558 3.8E-69 T 17-10-2018 BJD13_20865 9e64cda96fb2a4e53ffa8a5b35ea120e 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 443 450 3.8E-69 T 17-10-2018 BJD13_20865 9e64cda96fb2a4e53ffa8a5b35ea120e 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 271 280 3.8E-69 T 17-10-2018 BJD13_20865 9e64cda96fb2a4e53ffa8a5b35ea120e 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 565 585 3.8E-69 T 17-10-2018 BJD13_20865 9e64cda96fb2a4e53ffa8a5b35ea120e 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 478 499 3.8E-69 T 17-10-2018 BJD13_20865 9e64cda96fb2a4e53ffa8a5b35ea120e 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 400 414 3.8E-69 T 17-10-2018 BJD13_20865 9e64cda96fb2a4e53ffa8a5b35ea120e 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 137 159 3.8E-69 T 17-10-2018 BJD13_20865 9e64cda96fb2a4e53ffa8a5b35ea120e 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 307 332 3.8E-69 T 17-10-2018 BJD13_20865 9e64cda96fb2a4e53ffa8a5b35ea120e 607 SUPERFAMILY SSF51905 136 516 1.02E-61 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_20865 9e64cda96fb2a4e53ffa8a5b35ea120e 607 SUPERFAMILY SSF55424 480 601 3.95E-39 T 17-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 BJD13_20865 9e64cda96fb2a4e53ffa8a5b35ea120e 607 PIRSF PIRSF000350 88 603 3.0E-86 T 17-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 BJD13_20865 9e64cda96fb2a4e53ffa8a5b35ea120e 607 SUPERFAMILY SSF51230 2 95 4.45E-23 T 17-10-2018 IPR011053 Single hybrid motif BJD13_20865 9e64cda96fb2a4e53ffa8a5b35ea120e 607 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 171 181 - T 17-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 BJD13_20865 9e64cda96fb2a4e53ffa8a5b35ea120e 607 Pfam PF00364 Biotin-requiring enzyme 5 74 4.2E-20 T 17-10-2018 IPR000089 Biotin/lipoyl attachment BJD13_20865 9e64cda96fb2a4e53ffa8a5b35ea120e 607 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 482 590 3.3E-35 T 17-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 BJD13_20865 9e64cda96fb2a4e53ffa8a5b35ea120e 607 Gene3D G3DSA:3.30.390.30 481 602 1.9E-44 T 17-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 BJD13_20865 9e64cda96fb2a4e53ffa8a5b35ea120e 607 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 137 594 2.9E-154 T 17-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 BJD13_20865 9e64cda96fb2a4e53ffa8a5b35ea120e 607 Gene3D G3DSA:3.50.50.60 283 409 9.1E-118 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_20865 9e64cda96fb2a4e53ffa8a5b35ea120e 607 Gene3D G3DSA:2.40.50.100 2 82 6.7E-20 T 17-10-2018 BJD13_03265 62e152c718296ba950845936033bbaa7 192 Gene3D G3DSA:2.40.500.20 87 192 2.0E-40 T 17-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BJD13_03265 62e152c718296ba950845936033bbaa7 192 Gene3D G3DSA:1.10.287.990 20 81 1.6E-17 T 17-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BJD13_03265 62e152c718296ba950845936033bbaa7 192 SUPERFAMILY SSF54719 86 191 5.24E-41 T 17-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BJD13_03265 62e152c718296ba950845936033bbaa7 192 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 7.9E-15 T 17-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BJD13_03265 62e152c718296ba950845936033bbaa7 192 PRINTS PR01703 Manganese superoxide dismutase signature 155 167 7.9E-15 T 17-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BJD13_03265 62e152c718296ba950845936033bbaa7 192 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 7.9E-15 T 17-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BJD13_03265 62e152c718296ba950845936033bbaa7 192 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 7.9E-15 T 17-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BJD13_03265 62e152c718296ba950845936033bbaa7 192 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 7.9E-15 T 17-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BJD13_03265 62e152c718296ba950845936033bbaa7 192 PIRSF PIRSF000349 1 192 3.6E-74 T 17-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BJD13_03265 62e152c718296ba950845936033bbaa7 192 SUPERFAMILY SSF46609 2 83 1.7E-24 T 17-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BJD13_03265 62e152c718296ba950845936033bbaa7 192 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 157 164 - T 17-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BJD13_03265 62e152c718296ba950845936033bbaa7 192 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 190 1.6E-36 T 17-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BJD13_03265 62e152c718296ba950845936033bbaa7 192 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 7 81 3.6E-20 T 17-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BJD13_13325 4c8083ace8e132d0cda0ecc6aaf1d7e7 467 Gene3D G3DSA:3.20.20.70 137 389 4.4E-98 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD13_13325 4c8083ace8e132d0cda0ecc6aaf1d7e7 467 SUPERFAMILY SSF51690 171 464 4.32E-46 T 17-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 BJD13_13325 4c8083ace8e132d0cda0ecc6aaf1d7e7 467 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 172 410 6.0E-68 T 17-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 BJD13_13325 4c8083ace8e132d0cda0ecc6aaf1d7e7 467 PIRSF PIRSF005943 1 467 1.7E-197 T 17-10-2018 IPR016471 Nicotinamide phosphoribosyl transferase Reactome: R-HSA-1368108|Reactome: R-HSA-197264 BJD13_05305 742a98000666ea7e62736b2663b4d58a 290 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 163 227 5.3E-21 T 17-10-2018 IPR017703 YgfZ/GcvT conserved site BJD13_05305 742a98000666ea7e62736b2663b4d58a 290 Pfam PF01571 Aminomethyltransferase folate-binding domain 18 99 1.2E-6 T 17-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain BJD13_05305 742a98000666ea7e62736b2663b4d58a 290 SUPERFAMILY SSF103025 11 218 1.4E-42 T 17-10-2018 BJD13_05305 742a98000666ea7e62736b2663b4d58a 290 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 202 283 1.2E-6 T 17-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 BJD13_05305 742a98000666ea7e62736b2663b4d58a 290 Gene3D G3DSA:3.30.70.1400 19 104 1.1E-16 T 17-10-2018 BJD13_05305 742a98000666ea7e62736b2663b4d58a 290 Gene3D G3DSA:2.40.30.160 172 276 4.1E-21 T 17-10-2018 BJD13_14730 7404bad914700164d09ec491b64b85d6 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 7.7E-8 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_14730 7404bad914700164d09ec491b64b85d6 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 7.7E-8 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_14730 7404bad914700164d09ec491b64b85d6 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 7.7E-8 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_14730 7404bad914700164d09ec491b64b85d6 252 SUPERFAMILY SSF51735 9 250 6.58E-71 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_14730 7404bad914700164d09ec491b64b85d6 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 248 1.3E-54 T 17-10-2018 BJD13_14730 7404bad914700164d09ec491b64b85d6 252 Gene3D G3DSA:3.40.50.720 2 251 3.2E-71 T 17-10-2018 BJD13_14730 7404bad914700164d09ec491b64b85d6 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 17-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BJD13_14730 7404bad914700164d09ec491b64b85d6 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.6E-28 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_14730 7404bad914700164d09ec491b64b85d6 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.6E-28 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_14730 7404bad914700164d09ec491b64b85d6 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 1.6E-28 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_14730 7404bad914700164d09ec491b64b85d6 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.6E-28 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_14730 7404bad914700164d09ec491b64b85d6 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.6E-28 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_14730 7404bad914700164d09ec491b64b85d6 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 1.6E-28 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_22080 bf1f004b40a2dcd45cca9f8317faf175 79 SUPERFAMILY SSF57802 24 77 1.09E-21 T 17-10-2018 BJD13_22080 bf1f004b40a2dcd45cca9f8317faf175 79 PIRSF PIRSF000071 17 79 1.1E-23 T 17-10-2018 IPR024922 Rubredoxin GO:0005506|GO:0009055 BJD13_22080 bf1f004b40a2dcd45cca9f8317faf175 79 PRINTS PR00163 Rubredoxin signature 57 73 3.0E-7 T 17-10-2018 IPR024935 Rubredoxin domain GO:0005506 BJD13_22080 bf1f004b40a2dcd45cca9f8317faf175 79 PRINTS PR00163 Rubredoxin signature 27 43 3.0E-7 T 17-10-2018 IPR024935 Rubredoxin domain GO:0005506 BJD13_22080 bf1f004b40a2dcd45cca9f8317faf175 79 Gene3D G3DSA:2.20.28.10 18 79 1.1E-27 T 17-10-2018 BJD13_22080 bf1f004b40a2dcd45cca9f8317faf175 79 ProSitePatterns PS00202 Rubredoxin signature. 57 67 - T 17-10-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 BJD13_22080 bf1f004b40a2dcd45cca9f8317faf175 79 Pfam PF00301 Rubredoxin 28 73 6.1E-21 T 17-10-2018 IPR024935 Rubredoxin domain GO:0005506 BJD13_23605 e2c2cf40acc715e7f95362ad40cf9d4b 369 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 3 358 3.1E-132 T 17-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 BJD13_23605 e2c2cf40acc715e7f95362ad40cf9d4b 369 Gene3D G3DSA:2.40.30.110 282 369 9.5E-28 T 17-10-2018 BJD13_23605 e2c2cf40acc715e7f95362ad40cf9d4b 369 PIRSF PIRSF006487 1 364 7.4E-86 T 17-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 BJD13_23605 e2c2cf40acc715e7f95362ad40cf9d4b 369 Gene3D G3DSA:3.30.70.1400 51 138 7.4E-84 T 17-10-2018 BJD13_23605 e2c2cf40acc715e7f95362ad40cf9d4b 369 SUPERFAMILY SSF103025 3 281 2.02E-94 T 17-10-2018 BJD13_23605 e2c2cf40acc715e7f95362ad40cf9d4b 369 SUPERFAMILY SSF101790 275 361 2.94E-21 T 17-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal BJD13_23605 e2c2cf40acc715e7f95362ad40cf9d4b 369 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 359 45.904 T 17-10-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 BJD13_23605 e2c2cf40acc715e7f95362ad40cf9d4b 369 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 266 353 1.1E-17 T 17-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 BJD13_23605 e2c2cf40acc715e7f95362ad40cf9d4b 369 Gene3D G3DSA:3.30.1360.120 7 236 7.4E-84 T 17-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 BJD13_23605 e2c2cf40acc715e7f95362ad40cf9d4b 369 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 259 5.0E-90 T 17-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain BJD13_23605 e2c2cf40acc715e7f95362ad40cf9d4b 369 Gene3D G3DSA:4.10.1250.10 237 279 1.5E-20 T 17-10-2018 BJD13_07025 f009609dbf8bd3d5efd3739806993932 158 SUPERFAMILY SSF54534 82 156 4.84E-22 T 17-10-2018 BJD13_07025 f009609dbf8bd3d5efd3739806993932 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 156 3.0E-26 T 17-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 BJD13_07025 f009609dbf8bd3d5efd3739806993932 158 Gene3D G3DSA:3.10.50.30 75 157 1.7E-28 T 17-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 BJD13_07025 f009609dbf8bd3d5efd3739806993932 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 1 155 33.48 T 17-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 BJD13_07025 f009609dbf8bd3d5efd3739806993932 158 Pfam PF03449 Transcription elongation factor, N-terminal 4 73 3.5E-32 T 17-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 BJD13_07025 f009609dbf8bd3d5efd3739806993932 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 4 154 2.8E-58 T 17-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 BJD13_07025 f009609dbf8bd3d5efd3739806993932 158 Gene3D G3DSA:1.10.287.180 1 74 2.8E-32 T 17-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 BJD13_07025 f009609dbf8bd3d5efd3739806993932 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 16 47 - T 17-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 BJD13_07025 f009609dbf8bd3d5efd3739806993932 158 PIRSF PIRSF006092 1 158 6.8E-51 T 17-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 BJD13_07025 f009609dbf8bd3d5efd3739806993932 158 SUPERFAMILY SSF46557 4 77 3.66E-29 T 17-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 BJD13_07525 b5d42e5fed470680bcdd481eb7d8d39d 510 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 263 270 - T 17-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 BJD13_07525 b5d42e5fed470680bcdd481eb7d8d39d 510 Gene3D G3DSA:3.40.309.10 267 461 8.3E-145 T 17-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 BJD13_07525 b5d42e5fed470680bcdd481eb7d8d39d 510 SUPERFAMILY SSF53720 21 498 8.25E-132 T 17-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BJD13_07525 b5d42e5fed470680bcdd481eb7d8d39d 510 Pfam PF00171 Aldehyde dehydrogenase family 32 491 4.0E-129 T 17-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 BJD13_07525 b5d42e5fed470680bcdd481eb7d8d39d 510 Gene3D G3DSA:3.40.605.10 35 486 8.3E-145 T 17-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 BJD13_17730 6c434e6d55891b997c899f77491c8d44 226 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 183 6.2E-41 T 17-10-2018 IPR001303 Class II aldolase/adducin N-terminal BJD13_17730 6c434e6d55891b997c899f77491c8d44 226 SUPERFAMILY SSF53639 4 189 1.26E-45 T 17-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily BJD13_17730 6c434e6d55891b997c899f77491c8d44 226 SMART SM01007 8 186 9.8E-46 T 17-10-2018 IPR001303 Class II aldolase/adducin N-terminal BJD13_17730 6c434e6d55891b997c899f77491c8d44 226 Gene3D G3DSA:3.40.225.10 2 207 2.7E-49 T 17-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily BJD13_13985 7a045c21d6f01c4d49a70b66b2ad5e53 895 PIRSF PIRSF000156 1 895 0.0 T 17-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 BJD13_13985 7a045c21d6f01c4d49a70b66b2ad5e53 895 Gene3D G3DSA:3.40.50.970 59 475 5.1E-128 T 17-10-2018 BJD13_13985 7a045c21d6f01c4d49a70b66b2ad5e53 895 SUPERFAMILY SSF52518 480 704 7.4E-90 T 17-10-2018 IPR029061 Thiamin diphosphate-binding fold BJD13_13985 7a045c21d6f01c4d49a70b66b2ad5e53 895 SUPERFAMILY SSF52922 706 893 3.66E-59 T 17-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BJD13_13985 7a045c21d6f01c4d49a70b66b2ad5e53 895 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 139 294 1.2E-7 T 17-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BJD13_13985 7a045c21d6f01c4d49a70b66b2ad5e53 895 SUPERFAMILY SSF52518 60 472 3.33E-133 T 17-10-2018 IPR029061 Thiamin diphosphate-binding fold BJD13_13985 7a045c21d6f01c4d49a70b66b2ad5e53 895 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 9 893 0.0 T 17-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 BJD13_13985 7a045c21d6f01c4d49a70b66b2ad5e53 895 Gene3D G3DSA:3.40.50.970 476 710 1.5E-99 T 17-10-2018 BJD13_13985 7a045c21d6f01c4d49a70b66b2ad5e53 895 Gene3D G3DSA:3.40.50.920 711 894 1.7E-74 T 17-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BJD13_19010 9a78ea477dbecfe672aac1400a656aac 119 Gene3D G3DSA:3.30.450.30 3 117 2.9E-5 T 17-10-2018 BJD13_19010 9a78ea477dbecfe672aac1400a656aac 119 SUPERFAMILY SSF103196 6 113 2.09E-5 T 17-10-2018 BJD13_02275 e9c8732d0ed0dbfe531ecc02e0183122 268 Pfam PF03705 CheR methyltransferase, all-alpha domain 10 61 1.2E-14 T 17-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal BJD13_02275 e9c8732d0ed0dbfe531ecc02e0183122 268 Gene3D G3DSA:3.40.50.150 76 267 1.8E-55 T 17-10-2018 BJD13_02275 e9c8732d0ed0dbfe531ecc02e0183122 268 Gene3D G3DSA:1.10.155.10 1 75 2.5E-21 T 17-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily BJD13_02275 e9c8732d0ed0dbfe531ecc02e0183122 268 Pfam PF01739 CheR methyltransferase, SAM binding domain 77 254 6.9E-52 T 17-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal BJD13_02275 e9c8732d0ed0dbfe531ecc02e0183122 268 SUPERFAMILY SSF47757 4 76 3.01E-18 T 17-10-2018 BJD13_02275 e9c8732d0ed0dbfe531ecc02e0183122 268 PIRSF PIRSF000410 1 268 8.9E-90 T 17-10-2018 IPR026024 Chemotaxis protein methyltransferase CheR BJD13_02275 e9c8732d0ed0dbfe531ecc02e0183122 268 PRINTS PR00996 Glutamate methyltransferase family signature 137 153 2.2E-38 T 17-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BJD13_02275 e9c8732d0ed0dbfe531ecc02e0183122 268 PRINTS PR00996 Glutamate methyltransferase family signature 31 44 2.2E-38 T 17-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BJD13_02275 e9c8732d0ed0dbfe531ecc02e0183122 268 PRINTS PR00996 Glutamate methyltransferase family signature 105 125 2.2E-38 T 17-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BJD13_02275 e9c8732d0ed0dbfe531ecc02e0183122 268 PRINTS PR00996 Glutamate methyltransferase family signature 70 82 2.2E-38 T 17-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BJD13_02275 e9c8732d0ed0dbfe531ecc02e0183122 268 PRINTS PR00996 Glutamate methyltransferase family signature 227 250 2.2E-38 T 17-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BJD13_02275 e9c8732d0ed0dbfe531ecc02e0183122 268 PRINTS PR00996 Glutamate methyltransferase family signature 208 222 2.2E-38 T 17-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BJD13_02275 e9c8732d0ed0dbfe531ecc02e0183122 268 SMART SM00138 9 268 7.7E-82 T 17-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BJD13_02275 e9c8732d0ed0dbfe531ecc02e0183122 268 SUPERFAMILY SSF53335 77 263 5.72E-51 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_02585 0e14beeb7392f97481f05d972c07d7b0 558 Pfam PF11954 Domain of unknown function (DUF3471) 443 548 5.9E-32 T 17-10-2018 IPR021860 Peptidase S12, Pab87-related, C-terminal BJD13_02585 0e14beeb7392f97481f05d972c07d7b0 558 Gene3D G3DSA:2.40.128.600 437 531 3.6E-11 T 17-10-2018 BJD13_02585 0e14beeb7392f97481f05d972c07d7b0 558 Gene3D G3DSA:3.40.710.10 58 409 1.4E-95 T 17-10-2018 BJD13_02585 0e14beeb7392f97481f05d972c07d7b0 558 SUPERFAMILY SSF56601 58 392 2.35E-86 T 17-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BJD13_02585 0e14beeb7392f97481f05d972c07d7b0 558 Pfam PF00144 Beta-lactamase 65 398 1.8E-69 T 17-10-2018 IPR001466 Beta-lactamase-related BJD13_22650 45a275101f5b5a9526aed59cde896f56 130 Gene3D G3DSA:3.30.160.510 60 121 1.2E-25 T 17-10-2018 BJD13_22650 45a275101f5b5a9526aed59cde896f56 130 Pfam PF00816 H-NS histone family 16 108 1.1E-17 T 17-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 BJD13_22650 45a275101f5b5a9526aed59cde896f56 130 SUPERFAMILY SSF81273 80 108 4.32E-6 T 17-10-2018 BJD13_22650 45a275101f5b5a9526aed59cde896f56 130 SMART SM00528 75 118 1.3E-8 T 17-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 BJD13_17555 a34aef9294b8cc34545f80454fea8cc4 658 Pfam PF13361 UvrD-like helicase C-terminal domain 485 603 5.5E-28 T 17-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 BJD13_17555 a34aef9294b8cc34545f80454fea8cc4 658 Gene3D G3DSA:3.40.50.300 4 264 3.4E-87 T 17-10-2018 BJD13_17555 a34aef9294b8cc34545f80454fea8cc4 658 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 4 657 4.9E-287 T 17-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 BJD13_17555 a34aef9294b8cc34545f80454fea8cc4 658 SUPERFAMILY SSF52540 2 628 1.54E-159 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_17555 a34aef9294b8cc34545f80454fea8cc4 658 Gene3D G3DSA:1.10.486.10 375 530 2.0E-105 T 17-10-2018 BJD13_17555 a34aef9294b8cc34545f80454fea8cc4 658 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 2 658 36.616 T 17-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 BJD13_17555 a34aef9294b8cc34545f80454fea8cc4 658 Gene3D G3DSA:3.40.50.300 273 623 2.0E-105 T 17-10-2018 BJD13_17555 a34aef9294b8cc34545f80454fea8cc4 658 Gene3D G3DSA:1.10.10.160 106 181 3.4E-87 T 17-10-2018 IPR013986 DExx box DNA helicase domain superfamily BJD13_17555 a34aef9294b8cc34545f80454fea8cc4 658 Pfam PF13361 UvrD-like helicase C-terminal domain 269 421 3.7E-30 T 17-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 BJD13_17555 a34aef9294b8cc34545f80454fea8cc4 658 Pfam PF00580 UvrD/REP helicase N-terminal domain 4 263 9.7E-69 T 17-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 BJD13_19450 2dd038a716c1eef5234bbcfa7dd1570c 266 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 262 8.0E-65 T 17-10-2018 BJD13_19450 2dd038a716c1eef5234bbcfa7dd1570c 266 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 28 37 - T 17-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 BJD13_19450 2dd038a716c1eef5234bbcfa7dd1570c 266 SUPERFAMILY SSF56219 1 264 6.54E-76 T 17-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BJD13_19450 2dd038a716c1eef5234bbcfa7dd1570c 266 Gene3D G3DSA:3.60.10.10 1 265 4.5E-83 T 17-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BJD13_19450 2dd038a716c1eef5234bbcfa7dd1570c 266 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 257 1.4E-18 T 17-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase BJD13_19450 2dd038a716c1eef5234bbcfa7dd1570c 266 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 264 7.7E-72 T 17-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 BJD13_23515 49d4dbdd45ba2c049c89a4d39e9de35a 611 Pfam PF01301 Glycosyl hydrolases family 35 36 353 7.3E-121 T 17-10-2018 IPR031330 Glycoside hydrolase 35, catalytic domain KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 BJD13_23515 49d4dbdd45ba2c049c89a4d39e9de35a 611 SUPERFAMILY SSF51445 31 355 1.95E-95 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily BJD13_23515 49d4dbdd45ba2c049c89a4d39e9de35a 611 ProSitePatterns PS01182 Glycosyl hydrolases family 35 putative active site. 173 185 - T 17-10-2018 IPR019801 Glycoside hydrolase, family 35, conserved site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 BJD13_23515 49d4dbdd45ba2c049c89a4d39e9de35a 611 Gene3D G3DSA:2.60.120.260 377 507 6.9E-95 T 17-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD13_23515 49d4dbdd45ba2c049c89a4d39e9de35a 611 SUPERFAMILY SSF49785 376 476 3.54E-5 T 17-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD13_23515 49d4dbdd45ba2c049c89a4d39e9de35a 611 PRINTS PR00742 Glycosyl hydrolase family 35 signature 61 79 1.1E-46 T 17-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 BJD13_23515 49d4dbdd45ba2c049c89a4d39e9de35a 611 PRINTS PR00742 Glycosyl hydrolase family 35 signature 116 135 1.1E-46 T 17-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 BJD13_23515 49d4dbdd45ba2c049c89a4d39e9de35a 611 PRINTS PR00742 Glycosyl hydrolase family 35 signature 171 186 1.1E-46 T 17-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 BJD13_23515 49d4dbdd45ba2c049c89a4d39e9de35a 611 PRINTS PR00742 Glycosyl hydrolase family 35 signature 549 565 1.1E-46 T 17-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 BJD13_23515 49d4dbdd45ba2c049c89a4d39e9de35a 611 PRINTS PR00742 Glycosyl hydrolase family 35 signature 40 57 1.1E-46 T 17-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 BJD13_23515 49d4dbdd45ba2c049c89a4d39e9de35a 611 PRINTS PR00742 Glycosyl hydrolase family 35 signature 323 339 1.1E-46 T 17-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 BJD13_23515 49d4dbdd45ba2c049c89a4d39e9de35a 611 PRINTS PR00742 Glycosyl hydrolase family 35 signature 257 272 1.1E-46 T 17-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 BJD13_23515 49d4dbdd45ba2c049c89a4d39e9de35a 611 Gene3D G3DSA:2.60.120.260 298 590 6.9E-95 T 17-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD13_23515 49d4dbdd45ba2c049c89a4d39e9de35a 611 SUPERFAMILY SSF49785 467 592 2.07E-22 T 17-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD13_23515 49d4dbdd45ba2c049c89a4d39e9de35a 611 Gene3D G3DSA:3.20.20.80 29 297 2.4E-101 T 17-10-2018 BJD13_23515 49d4dbdd45ba2c049c89a4d39e9de35a 611 PIRSF PIRSF006336 8 605 5.1E-182 T 17-10-2018 IPR026283 Beta-galactosidase 1-like GO:0004565 BJD13_10065 13b92d6582435fa91304dc94fab72724 403 SUPERFAMILY SSF51445 13 373 1.37E-82 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily BJD13_10065 13b92d6582435fa91304dc94fab72724 403 Gene3D G3DSA:3.20.20.80 18 376 1.1E-111 T 17-10-2018 BJD13_10065 13b92d6582435fa91304dc94fab72724 403 Pfam PF07745 Glycosyl hydrolase family 53 32 368 6.4E-116 T 17-10-2018 IPR011683 Glycosyl hydrolase family 53 GO:0015926 BJD13_22425 6bc3b27d45b2a2c9cbbbcef313e0cd02 179 Pfam PF01661 Macro domain 19 137 2.1E-43 T 17-10-2018 IPR002589 Macro domain BJD13_22425 6bc3b27d45b2a2c9cbbbcef313e0cd02 179 Gene3D G3DSA:3.40.220.10 1 179 2.7E-73 T 17-10-2018 BJD13_22425 6bc3b27d45b2a2c9cbbbcef313e0cd02 179 SUPERFAMILY SSF52949 1 171 1.6E-62 T 17-10-2018 BJD13_22425 6bc3b27d45b2a2c9cbbbcef313e0cd02 179 SMART SM00506 2 137 2.8E-53 T 17-10-2018 IPR002589 Macro domain BJD13_05870 fe4527a40672b402535b58d5d0f73e15 217 Pfam PF09867 Uncharacterized protein conserved in bacteria (DUF2094) 9 127 2.6E-29 T 17-10-2018 IPR017748 T6S-associated protein TagF BJD13_05870 fe4527a40672b402535b58d5d0f73e15 217 Gene3D G3DSA:3.40.1730.10 6 213 1.9E-35 T 17-10-2018 IPR038225 T6S-associated protein TagF superfamily BJD13_05870 fe4527a40672b402535b58d5d0f73e15 217 TIGRFAM TIGR03373 VI_minor_4: type VI secretion-associated protein, BMA_A0400 family 9 143 3.5E-35 T 17-10-2018 IPR017748 T6S-associated protein TagF BJD13_05870 fe4527a40672b402535b58d5d0f73e15 217 PIRSF PIRSF029287 1 210 2.3E-30 T 17-10-2018 IPR017748 T6S-associated protein TagF BJD13_15430 6584ac7fc7c3d086105464f218c53f95 306 PRINTS PR00111 Alpha/beta hydrolase fold signature 89 104 2.9E-6 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD13_15430 6584ac7fc7c3d086105464f218c53f95 306 PRINTS PR00111 Alpha/beta hydrolase fold signature 249 263 2.9E-6 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD13_15430 6584ac7fc7c3d086105464f218c53f95 306 PRINTS PR00111 Alpha/beta hydrolase fold signature 136 149 2.9E-6 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD13_15430 6584ac7fc7c3d086105464f218c53f95 306 SUPERFAMILY SSF53474 40 304 7.58E-49 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_15430 6584ac7fc7c3d086105464f218c53f95 306 Pfam PF12697 Alpha/beta hydrolase family 65 297 1.9E-21 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD13_15430 6584ac7fc7c3d086105464f218c53f95 306 Gene3D G3DSA:3.40.50.1820 33 305 1.2E-80 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_10090 e594266075e1df7216b1dec921ad5c16 378 Gene3D G3DSA:3.40.640.10 50 271 1.4E-77 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD13_10090 e594266075e1df7216b1dec921ad5c16 378 Gene3D G3DSA:3.90.1150.10 272 363 1.4E-77 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD13_10090 e594266075e1df7216b1dec921ad5c16 378 SUPERFAMILY SSF53383 46 371 3.46E-68 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD13_10090 e594266075e1df7216b1dec921ad5c16 378 Pfam PF00155 Aminotransferase class I and II 53 360 7.9E-37 T 17-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BJD13_03015 c5343e7a11f9cd77ade76e9946063c31 357 Gene3D G3DSA:3.40.50.720 102 292 1.1E-106 T 17-10-2018 BJD13_03015 c5343e7a11f9cd77ade76e9946063c31 357 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 113 292 1.4E-59 T 17-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 BJD13_03015 c5343e7a11f9cd77ade76e9946063c31 357 Gene3D G3DSA:3.40.50.720 8 314 1.1E-106 T 17-10-2018 BJD13_03015 c5343e7a11f9cd77ade76e9946063c31 357 SUPERFAMILY SSF51735 105 293 5.2E-59 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_03015 c5343e7a11f9cd77ade76e9946063c31 357 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 153 181 - T 17-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 BJD13_03015 c5343e7a11f9cd77ade76e9946063c31 357 SUPERFAMILY SSF52283 6 140 4.54E-32 T 17-10-2018 BJD13_03015 c5343e7a11f9cd77ade76e9946063c31 357 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 14 319 4.4E-22 T 17-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 BJD13_14775 4009847f0f9ab39a7acfb1d2347d455b 542 Gene3D G3DSA:3.30.70.270 368 540 7.3E-47 T 17-10-2018 BJD13_14775 4009847f0f9ab39a7acfb1d2347d455b 542 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 383 540 6.9E-39 T 17-10-2018 IPR000160 GGDEF domain BJD13_14775 4009847f0f9ab39a7acfb1d2347d455b 542 Pfam PF00990 Diguanylate cyclase, GGDEF domain 384 537 5.6E-35 T 17-10-2018 IPR000160 GGDEF domain BJD13_14775 4009847f0f9ab39a7acfb1d2347d455b 542 SMART SM00267 370 541 5.7E-43 T 17-10-2018 IPR000160 GGDEF domain BJD13_14775 4009847f0f9ab39a7acfb1d2347d455b 542 SUPERFAMILY SSF55073 386 539 2.43E-42 T 17-10-2018 IPR029787 Nucleotide cyclase BJD13_05615 eae874bc4a09c930d4f666b1141e189d 222 Pfam PF00535 Glycosyl transferase family 2 4 124 4.6E-13 T 17-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BJD13_05615 eae874bc4a09c930d4f666b1141e189d 222 Gene3D G3DSA:3.90.550.10 1 203 4.1E-25 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD13_05615 eae874bc4a09c930d4f666b1141e189d 222 SUPERFAMILY SSF53448 2 195 1.69E-33 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD13_03875 81e3132f27c6a593cca8f1a639d54f43 592 Gene3D G3DSA:1.10.246.130 275 385 6.9E-35 T 17-10-2018 BJD13_03875 81e3132f27c6a593cca8f1a639d54f43 592 Pfam PF01019 Gamma-glutamyltranspeptidase 62 578 3.2E-166 T 17-10-2018 BJD13_03875 81e3132f27c6a593cca8f1a639d54f43 592 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 259 275 5.4E-65 T 17-10-2018 BJD13_03875 81e3132f27c6a593cca8f1a639d54f43 592 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 451 466 5.4E-65 T 17-10-2018 BJD13_03875 81e3132f27c6a593cca8f1a639d54f43 592 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 474 491 5.4E-65 T 17-10-2018 BJD13_03875 81e3132f27c6a593cca8f1a639d54f43 592 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 69 94 5.4E-65 T 17-10-2018 BJD13_03875 81e3132f27c6a593cca8f1a639d54f43 592 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 161 180 5.4E-65 T 17-10-2018 BJD13_03875 81e3132f27c6a593cca8f1a639d54f43 592 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 386 404 5.4E-65 T 17-10-2018 BJD13_03875 81e3132f27c6a593cca8f1a639d54f43 592 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 410 428 5.4E-65 T 17-10-2018 BJD13_03875 81e3132f27c6a593cca8f1a639d54f43 592 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 143 161 5.4E-65 T 17-10-2018 BJD13_03875 81e3132f27c6a593cca8f1a639d54f43 592 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 289 308 5.4E-65 T 17-10-2018 BJD13_03875 81e3132f27c6a593cca8f1a639d54f43 592 Gene3D G3DSA:3.60.20.40 386 579 1.8E-54 T 17-10-2018 BJD13_03875 81e3132f27c6a593cca8f1a639d54f43 592 SUPERFAMILY SSF56235 43 578 6.37E-166 T 17-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BJD13_03875 81e3132f27c6a593cca8f1a639d54f43 592 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 49 577 6.0E-141 T 17-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 BJD13_01000 9f2d0781a5c8227218f2aabb80a54769 144 Gene3D G3DSA:2.40.50.90 16 140 3.0E-23 T 17-10-2018 IPR035437 SNase-like, OB-fold superfamily BJD13_01000 9f2d0781a5c8227218f2aabb80a54769 144 SMART SM00318 6 132 8.7E-13 T 17-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 BJD13_01000 9f2d0781a5c8227218f2aabb80a54769 144 SUPERFAMILY SSF50199 17 137 3.01E-29 T 17-10-2018 BJD13_01000 9f2d0781a5c8227218f2aabb80a54769 144 Pfam PF00565 Staphylococcal nuclease homologue 30 131 3.2E-14 T 17-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 BJD13_11210 cba108dc1408bea1d4a45d0a37ebb4f6 88 SUPERFAMILY SSF46689 1 84 3.76E-12 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_11210 cba108dc1408bea1d4a45d0a37ebb4f6 88 Pfam PF01527 Transposase 2 71 1.0E-19 T 17-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 BJD13_11210 cba108dc1408bea1d4a45d0a37ebb4f6 88 Gene3D G3DSA:1.10.10.60 9 86 1.3E-5 T 17-10-2018 BJD13_06750 cba108dc1408bea1d4a45d0a37ebb4f6 88 SUPERFAMILY SSF46689 1 84 3.76E-12 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_06750 cba108dc1408bea1d4a45d0a37ebb4f6 88 Pfam PF01527 Transposase 2 71 1.0E-19 T 17-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 BJD13_06750 cba108dc1408bea1d4a45d0a37ebb4f6 88 Gene3D G3DSA:1.10.10.60 9 86 1.3E-5 T 17-10-2018 BJD13_15255 cba108dc1408bea1d4a45d0a37ebb4f6 88 SUPERFAMILY SSF46689 1 84 3.76E-12 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_15255 cba108dc1408bea1d4a45d0a37ebb4f6 88 Pfam PF01527 Transposase 2 71 1.0E-19 T 17-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 BJD13_15255 cba108dc1408bea1d4a45d0a37ebb4f6 88 Gene3D G3DSA:1.10.10.60 9 86 1.3E-5 T 17-10-2018 BJD13_13880 cba108dc1408bea1d4a45d0a37ebb4f6 88 SUPERFAMILY SSF46689 1 84 3.76E-12 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_13880 cba108dc1408bea1d4a45d0a37ebb4f6 88 Pfam PF01527 Transposase 2 71 1.0E-19 T 17-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 BJD13_13880 cba108dc1408bea1d4a45d0a37ebb4f6 88 Gene3D G3DSA:1.10.10.60 9 86 1.3E-5 T 17-10-2018 BJD13_12960 4fdbb7e8c85787d0d668a44d239ceda7 526 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 37 275 8.6E-36 T 17-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 BJD13_12960 4fdbb7e8c85787d0d668a44d239ceda7 526 Pfam PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain 306 510 2.3E-17 T 17-10-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 BJD13_12960 4fdbb7e8c85787d0d668a44d239ceda7 526 SUPERFAMILY SSF53474 31 329 9.33E-43 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_12960 4fdbb7e8c85787d0d668a44d239ceda7 526 SUPERFAMILY SSF49785 398 524 5.53E-14 T 17-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD13_12960 4fdbb7e8c85787d0d668a44d239ceda7 526 SMART SM00939 294 521 3.3E-28 T 17-10-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 BJD13_12960 4fdbb7e8c85787d0d668a44d239ceda7 526 Gene3D G3DSA:2.60.120.260 332 526 5.2E-17 T 17-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD13_12960 4fdbb7e8c85787d0d668a44d239ceda7 526 Gene3D G3DSA:3.40.50.1820 23 304 1.4E-37 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_14800 7719bcf54949e48a5cc62cf1357ebd24 702 Hamap MF_01070 Phosphoglycerol transferase I [mdoB]. 1 702 57.985 T 17-10-2018 IPR020881 Phosphoglycerol transferase I GO:0005886|GO:0008960|GO:0009250 KEGG: 00561+2.7.8.20 BJD13_14800 7719bcf54949e48a5cc62cf1357ebd24 702 Pfam PF00884 Sulfatase 157 441 1.6E-23 T 17-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 BJD13_14800 7719bcf54949e48a5cc62cf1357ebd24 702 Gene3D G3DSA:3.40.720.10 150 443 3.3E-46 T 17-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 BJD13_14800 7719bcf54949e48a5cc62cf1357ebd24 702 SUPERFAMILY SSF53649 155 457 3.11E-40 T 17-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 BJD13_23420 f90b36927c38cee88f6109ea87849146 678 Gene3D G3DSA:1.10.287.950 350 677 5.1E-64 T 17-10-2018 BJD13_23420 f90b36927c38cee88f6109ea87849146 678 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 435 464 6.3E-19 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD13_23420 f90b36927c38cee88f6109ea87849146 678 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 541 570 6.3E-19 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD13_23420 f90b36927c38cee88f6109ea87849146 678 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 512 539 6.3E-19 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD13_23420 f90b36927c38cee88f6109ea87849146 678 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 459 642 3.2E-42 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD13_23420 f90b36927c38cee88f6109ea87849146 678 SMART SM00283 414 675 4.5E-86 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD13_23420 f90b36927c38cee88f6109ea87849146 678 SUPERFAMILY SSF58104 376 676 8.72E-69 T 17-10-2018 BJD13_14640 84206fc6232f1a546a23162793b5c204 1193 SUPERFAMILY SSF56219 587 920 3.17E-23 T 17-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BJD13_14640 84206fc6232f1a546a23162793b5c204 1193 Pfam PF03160 Calx-beta domain 228 296 4.7E-8 T 17-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 BJD13_14640 84206fc6232f1a546a23162793b5c204 1193 Gene3D G3DSA:3.60.10.10 587 920 2.2E-21 T 17-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BJD13_14640 84206fc6232f1a546a23162793b5c204 1193 SUPERFAMILY SSF141072 210 318 3.27E-22 T 17-10-2018 IPR038081 CalX-like domain superfamily BJD13_14640 84206fc6232f1a546a23162793b5c204 1193 SMART SM00237 210 296 0.0056 T 17-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 BJD13_14640 84206fc6232f1a546a23162793b5c204 1193 Gene3D G3DSA:2.60.40.2030 209 326 3.1E-18 T 17-10-2018 IPR038081 CalX-like domain superfamily BJD13_14640 84206fc6232f1a546a23162793b5c204 1193 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 590 912 2.2E-7 T 17-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase BJD13_14640 84206fc6232f1a546a23162793b5c204 1193 Pfam PF00932 Lamin Tail Domain 20 125 1.4E-14 T 17-10-2018 IPR001322 Lamin tail domain BJD13_14640 84206fc6232f1a546a23162793b5c204 1193 SUPERFAMILY SSF88633 18 192 1.53E-12 T 17-10-2018 BJD13_14625 bda39851772e0dd57968110976a3490b 196 Pfam PF13899 Thioredoxin-like 75 159 1.1E-11 T 17-10-2018 BJD13_14625 bda39851772e0dd57968110976a3490b 196 Gene3D G3DSA:3.40.30.10 62 192 2.5E-22 T 17-10-2018 BJD13_14625 bda39851772e0dd57968110976a3490b 196 SUPERFAMILY SSF52833 54 189 2.3E-18 T 17-10-2018 IPR036249 Thioredoxin-like superfamily BJD13_23665 7029ba94fbca369b562513f04b68ce7c 248 Pfam PF00912 Transglycosylase 71 231 2.1E-45 T 17-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BJD13_23665 7029ba94fbca369b562513f04b68ce7c 248 Hamap MF_00766 Biosynthetic peptidoglycan transglycosylase [mtgA]. 19 240 42.013 T 17-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BJD13_23665 7029ba94fbca369b562513f04b68ce7c 248 SUPERFAMILY SSF53955 67 238 3.37E-56 T 17-10-2018 IPR023346 Lysozyme-like domain superfamily BJD13_23665 7029ba94fbca369b562513f04b68ce7c 248 Gene3D G3DSA:1.10.3810.10 65 238 5.6E-48 T 17-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BJD13_23665 7029ba94fbca369b562513f04b68ce7c 248 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 19 238 6.7E-87 T 17-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BJD13_22870 1a5069b8e945b6d947e7824637441892 108 Gene3D G3DSA:3.40.1440.10 8 103 1.1E-27 T 17-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 BJD13_22870 1a5069b8e945b6d947e7824637441892 108 Pfam PF01541 GIY-YIG catalytic domain 14 83 1.9E-11 T 17-10-2018 IPR000305 GIY-YIG endonuclease BJD13_22870 1a5069b8e945b6d947e7824637441892 108 SUPERFAMILY SSF82771 13 84 2.35E-11 T 17-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 BJD13_16475 9b29f803c09eb2b6801e68bd04ab0206 400 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 246 259 - T 17-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 BJD13_16475 9b29f803c09eb2b6801e68bd04ab0206 400 SUPERFAMILY SSF53383 2 396 8.46E-115 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD13_16475 9b29f803c09eb2b6801e68bd04ab0206 400 PRINTS PR00799 Aspartate aminotransferase signature 276 301 4.6E-35 T 17-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 BJD13_16475 9b29f803c09eb2b6801e68bd04ab0206 400 PRINTS PR00799 Aspartate aminotransferase signature 177 196 4.6E-35 T 17-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 BJD13_16475 9b29f803c09eb2b6801e68bd04ab0206 400 PRINTS PR00799 Aspartate aminotransferase signature 208 220 4.6E-35 T 17-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 BJD13_16475 9b29f803c09eb2b6801e68bd04ab0206 400 PRINTS PR00799 Aspartate aminotransferase signature 343 361 4.6E-35 T 17-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 BJD13_16475 9b29f803c09eb2b6801e68bd04ab0206 400 Pfam PF00155 Aminotransferase class I and II 29 394 1.1E-80 T 17-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BJD13_16475 9b29f803c09eb2b6801e68bd04ab0206 400 Gene3D G3DSA:3.40.640.10 62 303 8.5E-158 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD13_16475 9b29f803c09eb2b6801e68bd04ab0206 400 Gene3D G3DSA:3.90.1150.10 7 394 8.5E-158 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD13_04225 9989b0d134b295c881a1b502d610e466 214 Gene3D G3DSA:1.20.1050.10 86 191 1.4E-47 T 17-10-2018 BJD13_04225 9989b0d134b295c881a1b502d610e466 214 SUPERFAMILY SSF47616 86 199 6.54E-18 T 17-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily BJD13_04225 9989b0d134b295c881a1b502d610e466 214 Gene3D G3DSA:3.40.30.10 9 195 1.4E-47 T 17-10-2018 BJD13_04225 9989b0d134b295c881a1b502d610e466 214 Pfam PF02798 Glutathione S-transferase, N-terminal domain 7 79 2.6E-14 T 17-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 BJD13_04225 9989b0d134b295c881a1b502d610e466 214 SUPERFAMILY SSF52833 6 88 5.83E-23 T 17-10-2018 IPR036249 Thioredoxin-like superfamily BJD13_20790 ed99a674c2a6db5761724ee81ed9078a 578 Pfam PF00512 His Kinase A (phospho-acceptor) domain 206 270 3.2E-13 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_20790 ed99a674c2a6db5761724ee81ed9078a 578 SUPERFAMILY SSF47384 190 271 3.53E-15 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD13_20790 ed99a674c2a6db5761724ee81ed9078a 578 Gene3D G3DSA:3.30.565.10 271 436 3.6E-37 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_20790 ed99a674c2a6db5761724ee81ed9078a 578 SMART SM00448 457 569 1.1E-25 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_20790 ed99a674c2a6db5761724ee81ed9078a 578 SUPERFAMILY SSF55874 259 429 2.62E-37 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_20790 ed99a674c2a6db5761724ee81ed9078a 578 SUPERFAMILY SSF52172 456 575 1.85E-31 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_20790 ed99a674c2a6db5761724ee81ed9078a 578 Pfam PF00072 Response regulator receiver domain 460 569 1.5E-18 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_20790 ed99a674c2a6db5761724ee81ed9078a 578 SMART SM00388 205 270 9.8E-16 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_20790 ed99a674c2a6db5761724ee81ed9078a 578 Gene3D G3DSA:3.40.50.2300 444 577 4.5E-30 T 17-10-2018 BJD13_20790 ed99a674c2a6db5761724ee81ed9078a 578 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 317 431 5.4E-22 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_20790 ed99a674c2a6db5761724ee81ed9078a 578 Gene3D G3DSA:1.10.287.130 192 270 4.6E-18 T 17-10-2018 BJD13_20790 ed99a674c2a6db5761724ee81ed9078a 578 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 411 4.4E-9 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_20790 ed99a674c2a6db5761724ee81ed9078a 578 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 386 4.4E-9 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_20790 ed99a674c2a6db5761724ee81ed9078a 578 PRINTS PR00344 Bacterial sensor protein C-terminal signature 358 372 4.4E-9 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_20790 ed99a674c2a6db5761724ee81ed9078a 578 SMART SM00387 317 433 7.4E-31 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_09905 855bc0ba3ccd87f602f2ec3ede17cdec 833 Pfam PF08494 DEAD/H associated 612 799 5.7E-47 T 17-10-2018 IPR013701 DEAD/H associated GO:0005524|GO:0016818 BJD13_09905 855bc0ba3ccd87f602f2ec3ede17cdec 833 PIRSF PIRSF037307 8 831 3.8E-138 T 17-10-2018 IPR017170 Lhr-like ATP-dependent RNA helicase, predicted GO:0005524|GO:0016818 BJD13_09905 855bc0ba3ccd87f602f2ec3ede17cdec 833 Pfam PF00271 Helicase conserved C-terminal domain 266 371 2.8E-12 T 17-10-2018 IPR001650 Helicase, C-terminal BJD13_09905 855bc0ba3ccd87f602f2ec3ede17cdec 833 Gene3D G3DSA:3.40.50.300 16 228 6.8E-41 T 17-10-2018 BJD13_09905 855bc0ba3ccd87f602f2ec3ede17cdec 833 Pfam PF00270 DEAD/DEAH box helicase 28 214 4.2E-23 T 17-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BJD13_09905 855bc0ba3ccd87f602f2ec3ede17cdec 833 Gene3D G3DSA:3.40.50.300 260 408 1.1E-22 T 17-10-2018 BJD13_09905 855bc0ba3ccd87f602f2ec3ede17cdec 833 SUPERFAMILY SSF52540 33 385 1.17E-45 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_09905 855bc0ba3ccd87f602f2ec3ede17cdec 833 SMART SM00487 22 244 2.4E-23 T 17-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BJD13_09905 855bc0ba3ccd87f602f2ec3ede17cdec 833 TIGRFAM TIGR04121 DEXH_lig_assoc: DEXH box helicase, DNA ligase-associated 15 828 0.0 T 17-10-2018 IPR026362 DEXH box helicase, DNA ligase-associated BJD13_09905 855bc0ba3ccd87f602f2ec3ede17cdec 833 SMART SM00490 293 375 2.1E-15 T 17-10-2018 IPR001650 Helicase, C-terminal BJD13_17110 ec01b8ba333c561b9b3f353f7b5f05da 206 Pfam PF13417 Glutathione S-transferase, N-terminal domain 5 77 3.7E-14 T 17-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 BJD13_17110 ec01b8ba333c561b9b3f353f7b5f05da 206 SUPERFAMILY SSF47616 80 201 5.43E-27 T 17-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily BJD13_17110 ec01b8ba333c561b9b3f353f7b5f05da 206 Pfam PF13410 Glutathione S-transferase, C-terminal domain 126 190 2.2E-7 T 17-10-2018 BJD13_17110 ec01b8ba333c561b9b3f353f7b5f05da 206 Gene3D G3DSA:3.40.30.10 1 82 6.4E-31 T 17-10-2018 BJD13_17110 ec01b8ba333c561b9b3f353f7b5f05da 206 SUPERFAMILY SSF52833 1 84 3.08E-22 T 17-10-2018 IPR036249 Thioredoxin-like superfamily BJD13_17110 ec01b8ba333c561b9b3f353f7b5f05da 206 Gene3D G3DSA:1.20.1050.10 84 202 3.8E-41 T 17-10-2018 BJD13_13385 c3c8eb1c8d8376c9a26f450ee3f70b4f 470 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 137 237 3.8E-41 T 17-10-2018 IPR012997 Rare lipoprotein A BJD13_13385 c3c8eb1c8d8376c9a26f450ee3f70b4f 470 Pfam PF05036 Sporulation related domain 395 468 2.4E-11 T 17-10-2018 IPR007730 Sporulation-like domain GO:0042834 BJD13_13385 c3c8eb1c8d8376c9a26f450ee3f70b4f 470 Gene3D G3DSA:2.40.40.10 134 227 2.6E-34 T 17-10-2018 IPR036908 RlpA-like domain superfamily BJD13_13385 c3c8eb1c8d8376c9a26f450ee3f70b4f 470 Pfam PF03330 Lytic transglycolase 135 224 6.2E-24 T 17-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain BJD13_13385 c3c8eb1c8d8376c9a26f450ee3f70b4f 470 SUPERFAMILY SSF110997 397 468 3.79E-7 T 17-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 BJD13_13385 c3c8eb1c8d8376c9a26f450ee3f70b4f 470 SUPERFAMILY SSF50685 123 220 3.84E-10 T 17-10-2018 IPR036908 RlpA-like domain superfamily BJD13_13385 c3c8eb1c8d8376c9a26f450ee3f70b4f 470 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 23 227 23.988 T 17-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 BJD13_14215 1a4116266cadf09399d274ae28f9f044 162 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 91 104 2.2E-14 T 17-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 BJD13_14215 1a4116266cadf09399d274ae28f9f044 162 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 123 136 2.2E-14 T 17-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 BJD13_14215 1a4116266cadf09399d274ae28f9f044 162 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 108 122 2.2E-14 T 17-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 BJD13_14215 1a4116266cadf09399d274ae28f9f044 162 SUPERFAMILY SSF51230 87 161 3.01E-23 T 17-10-2018 IPR011053 Single hybrid motif BJD13_14215 1a4116266cadf09399d274ae28f9f044 162 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 118 135 - T 17-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BJD13_14215 1a4116266cadf09399d274ae28f9f044 162 Pfam PF00364 Biotin-requiring enzyme 88 161 1.9E-21 T 17-10-2018 IPR000089 Biotin/lipoyl attachment BJD13_14215 1a4116266cadf09399d274ae28f9f044 162 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 161 4.2E-52 T 17-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 BJD13_14215 1a4116266cadf09399d274ae28f9f044 162 Gene3D G3DSA:2.40.50.100 84 161 6.1E-29 T 17-10-2018 BJD13_02845 38a79b622b2fb58c361bc125cc04a45e 163 SUPERFAMILY SSF54637 8 155 3.6E-41 T 17-10-2018 IPR029069 HotDog domain superfamily BJD13_02845 38a79b622b2fb58c361bc125cc04a45e 163 Gene3D G3DSA:3.10.129.10 4 154 4.6E-42 T 17-10-2018 BJD13_02845 38a79b622b2fb58c361bc125cc04a45e 163 Pfam PF03061 Thioesterase superfamily 22 94 1.3E-17 T 17-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 BJD13_14735 990a1fdad6445f55d6b4d3f228a7e317 210 Pfam PF13460 NAD(P)H-binding 7 152 3.6E-8 T 17-10-2018 IPR016040 NAD(P)-binding domain BJD13_14735 990a1fdad6445f55d6b4d3f228a7e317 210 Gene3D G3DSA:3.40.50.720 1 209 7.9E-57 T 17-10-2018 BJD13_14735 990a1fdad6445f55d6b4d3f228a7e317 210 SUPERFAMILY SSF51735 1 201 8.79E-38 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_08995 b5ad38da1a6c6a2cf511644ea16f61cd 361 Gene3D G3DSA:2.40.30.170 63 277 2.2E-29 T 17-10-2018 BJD13_08995 b5ad38da1a6c6a2cf511644ea16f61cd 361 Gene3D G3DSA:2.40.50.100 65 215 2.2E-29 T 17-10-2018 BJD13_08995 b5ad38da1a6c6a2cf511644ea16f61cd 361 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 63 255 1.6E-10 T 17-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BJD13_08995 b5ad38da1a6c6a2cf511644ea16f61cd 361 SUPERFAMILY SSF111369 66 214 4.84E-10 T 17-10-2018 BJD13_08995 b5ad38da1a6c6a2cf511644ea16f61cd 361 Gene3D G3DSA:1.10.287.470 109 178 2.2E-29 T 17-10-2018 BJD13_20065 794de4938500e7f4f2ec647c9ecd6b9b 898 SUPERFAMILY SSF52540 558 711 7.39E-5 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_20065 794de4938500e7f4f2ec647c9ecd6b9b 898 Pfam PF13155 Toprim-like 181 274 4.2E-12 T 17-10-2018 BJD13_20065 794de4938500e7f4f2ec647c9ecd6b9b 898 Gene3D G3DSA:3.40.1360.10 163 291 8.8E-12 T 17-10-2018 BJD13_20065 794de4938500e7f4f2ec647c9ecd6b9b 898 SUPERFAMILY SSF56731 166 303 3.14E-7 T 17-10-2018 BJD13_11060 04ebb28abf5df4a781fc9caca3b460a9 117 Pfam PF07238 PilZ domain 15 104 8.5E-10 T 17-10-2018 IPR009875 PilZ domain GO:0035438 BJD13_11060 04ebb28abf5df4a781fc9caca3b460a9 117 Gene3D G3DSA:2.40.10.220 1 117 4.3E-49 T 17-10-2018 BJD13_04375 6d6a827e47fbd24b40203518847750a8 495 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 9 209 23.193 T 17-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 BJD13_04375 6d6a827e47fbd24b40203518847750a8 495 ProSitePatterns PS01049 YjeF C-terminal domain signature 1. 314 324 - T 17-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site BJD13_04375 6d6a827e47fbd24b40203518847750a8 495 SUPERFAMILY SSF53613 226 488 2.18E-71 T 17-10-2018 IPR029056 Ribokinase-like BJD13_04375 6d6a827e47fbd24b40203518847750a8 495 Gene3D G3DSA:3.40.1190.20 224 493 1.6E-80 T 17-10-2018 IPR029056 Ribokinase-like BJD13_04375 6d6a827e47fbd24b40203518847750a8 495 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 13 209 5.0E-40 T 17-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 BJD13_04375 6d6a827e47fbd24b40203518847750a8 495 SUPERFAMILY SSF64153 7 245 9.16E-58 T 17-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 BJD13_04375 6d6a827e47fbd24b40203518847750a8 495 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 224 494 22.275 T 17-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 BJD13_04375 6d6a827e47fbd24b40203518847750a8 495 Pfam PF03853 YjeF-related protein N-terminus 30 187 2.0E-40 T 17-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 BJD13_04375 6d6a827e47fbd24b40203518847750a8 495 Gene3D G3DSA:3.40.50.10260 5 215 3.8E-55 T 17-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 BJD13_04375 6d6a827e47fbd24b40203518847750a8 495 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 223 488 3.6E-72 T 17-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 BJD13_04375 6d6a827e47fbd24b40203518847750a8 495 Pfam PF01256 Carbohydrate kinase 247 485 4.0E-59 T 17-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 BJD13_04375 6d6a827e47fbd24b40203518847750a8 495 PIRSF PIRSF017184 5 492 9.2E-128 T 17-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 BJD13_04960 243efa3db44816119a0df2a86649f6c7 303 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 119 140 5.7E-81 T 17-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BJD13_04960 243efa3db44816119a0df2a86649f6c7 303 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 43 65 5.7E-81 T 17-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BJD13_04960 243efa3db44816119a0df2a86649f6c7 303 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 267 285 5.7E-81 T 17-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BJD13_04960 243efa3db44816119a0df2a86649f6c7 303 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 215 244 5.7E-81 T 17-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BJD13_04960 243efa3db44816119a0df2a86649f6c7 303 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 84 111 5.7E-81 T 17-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BJD13_04960 243efa3db44816119a0df2a86649f6c7 303 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 250 266 5.7E-81 T 17-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BJD13_04960 243efa3db44816119a0df2a86649f6c7 303 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 164 184 5.7E-81 T 17-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BJD13_04960 243efa3db44816119a0df2a86649f6c7 303 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 14 130 9.5E-35 T 17-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BJD13_04960 243efa3db44816119a0df2a86649f6c7 303 SUPERFAMILY SSF51735 132 290 2.39E-44 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_04960 243efa3db44816119a0df2a86649f6c7 303 Hamap MF_01576 Bifunctional protein FolD [folD]. 12 294 36.654 T 17-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BJD13_04960 243efa3db44816119a0df2a86649f6c7 303 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 133 291 6.7E-63 T 17-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BJD13_04960 243efa3db44816119a0df2a86649f6c7 303 Gene3D G3DSA:3.40.50.10860 17 288 7.7E-100 T 17-10-2018 BJD13_04960 243efa3db44816119a0df2a86649f6c7 303 Gene3D G3DSA:3.40.50.720 15 270 7.7E-100 T 17-10-2018 BJD13_04960 243efa3db44816119a0df2a86649f6c7 303 SUPERFAMILY SSF53223 12 131 3.64E-36 T 17-10-2018 BJD13_04960 243efa3db44816119a0df2a86649f6c7 303 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 271 279 - T 17-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BJD13_17480 3ccabc441e469cc2fd1d92ce9715f4da 720 Gene3D G3DSA:1.10.530.10 67 319 1.6E-76 T 17-10-2018 BJD13_17480 3ccabc441e469cc2fd1d92ce9715f4da 720 Pfam PF01471 Putative peptidoglycan binding domain 342 397 8.8E-9 T 17-10-2018 IPR002477 Peptidoglycan binding-like BJD13_17480 3ccabc441e469cc2fd1d92ce9715f4da 720 SUPERFAMILY SSF74650 440 717 1.51E-60 T 17-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 BJD13_17480 3ccabc441e469cc2fd1d92ce9715f4da 720 SUPERFAMILY SSF47090 327 398 2.88E-14 T 17-10-2018 IPR036365 PGBD-like superfamily BJD13_17480 3ccabc441e469cc2fd1d92ce9715f4da 720 Pfam PF01263 Aldose 1-epimerase 456 717 8.2E-40 T 17-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 BJD13_17480 3ccabc441e469cc2fd1d92ce9715f4da 720 Gene3D G3DSA:1.10.8.350 36 200 1.6E-76 T 17-10-2018 BJD13_17480 3ccabc441e469cc2fd1d92ce9715f4da 720 Gene3D G3DSA:1.10.101.10 335 401 1.5E-8 T 17-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 BJD13_17480 3ccabc441e469cc2fd1d92ce9715f4da 720 Pfam PF13406 Transglycosylase SLT domain 25 320 1.1E-99 T 17-10-2018 IPR031304 Transglycosylase SLT domain 2 BJD13_17480 3ccabc441e469cc2fd1d92ce9715f4da 720 SUPERFAMILY SSF53955 10 326 1.57E-94 T 17-10-2018 IPR023346 Lysozyme-like domain superfamily BJD13_17480 3ccabc441e469cc2fd1d92ce9715f4da 720 Gene3D G3DSA:2.70.98.10 452 720 2.1E-70 T 17-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 BJD13_17480 3ccabc441e469cc2fd1d92ce9715f4da 720 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 24 323 3.3E-112 T 17-10-2018 IPR011970 Lytic murein transglycosylase BJD13_02890 d12f179d42ce184fd9f7a86de632e6b9 671 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 480 492 1.7E-5 T 17-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 BJD13_02890 d12f179d42ce184fd9f7a86de632e6b9 671 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 501 517 1.7E-5 T 17-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 BJD13_02890 d12f179d42ce184fd9f7a86de632e6b9 671 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 574 585 1.7E-5 T 17-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 BJD13_02890 d12f179d42ce184fd9f7a86de632e6b9 671 Pfam PF05649 Peptidase family M13 44 418 2.5E-66 T 17-10-2018 IPR008753 Peptidase M13, N-terminal domain GO:0006508 BJD13_02890 d12f179d42ce184fd9f7a86de632e6b9 671 Pfam PF01431 Peptidase family M13 473 663 6.3E-42 T 17-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 BJD13_02890 d12f179d42ce184fd9f7a86de632e6b9 671 SUPERFAMILY SSF55486 43 670 3.66E-138 T 17-10-2018 BJD13_02890 d12f179d42ce184fd9f7a86de632e6b9 671 Gene3D G3DSA:3.40.390.10 43 670 2.5E-141 T 17-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 BJD13_02890 d12f179d42ce184fd9f7a86de632e6b9 671 Gene3D G3DSA:1.10.1380.10 68 457 2.5E-141 T 17-10-2018 BJD13_04750 6ac541ca0aa7a127f89c264bb7950658 337 SUPERFAMILY SSF48452 71 185 3.32E-16 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_04750 6ac541ca0aa7a127f89c264bb7950658 337 Gene3D G3DSA:1.25.40.10 70 214 6.6E-24 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_04750 6ac541ca0aa7a127f89c264bb7950658 337 Pfam PF13432 Tetratricopeptide repeat 68 119 3.3E-6 T 17-10-2018 BJD13_04750 6ac541ca0aa7a127f89c264bb7950658 337 Pfam PF13432 Tetratricopeptide repeat 142 177 0.0019 T 17-10-2018 BJD13_13825 e920b665f0423b112e2f269466c954fa 528 Gene3D G3DSA:3.40.50.720 162 328 2.5E-16 T 17-10-2018 BJD13_13825 e920b665f0423b112e2f269466c954fa 528 SUPERFAMILY SSF51735 170 514 6.62E-28 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_13825 e920b665f0423b112e2f269466c954fa 528 Gene3D G3DSA:3.40.50.720 363 520 1.5E-16 T 17-10-2018 BJD13_13825 e920b665f0423b112e2f269466c954fa 528 Pfam PF00106 short chain dehydrogenase 175 266 5.5E-7 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_13825 e920b665f0423b112e2f269466c954fa 528 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 380 479 3.0E-8 T 17-10-2018 BJD13_17850 2184d1623302f352c8918738ac424cad 321 TIGRFAM TIGR00109 hemH: ferrochelatase 8 317 2.6E-86 T 17-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 BJD13_17850 2184d1623302f352c8918738ac424cad 321 Gene3D G3DSA:3.40.50.1400 166 303 7.5E-87 T 17-10-2018 BJD13_17850 2184d1623302f352c8918738ac424cad 321 Pfam PF00762 Ferrochelatase 10 320 1.3E-100 T 17-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 BJD13_17850 2184d1623302f352c8918738ac424cad 321 Hamap MF_00323 Ferrochelatase [hemH]. 8 321 33.579 T 17-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 BJD13_17850 2184d1623302f352c8918738ac424cad 321 SUPERFAMILY SSF53800 8 320 1.28E-93 T 17-10-2018 BJD13_17850 2184d1623302f352c8918738ac424cad 321 Gene3D G3DSA:3.40.50.1400 10 319 7.5E-87 T 17-10-2018 BJD13_17850 2184d1623302f352c8918738ac424cad 321 ProSitePatterns PS00534 Ferrochelatase signature. 192 210 - T 17-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 BJD13_08480 f295f91ae547529402495a3a091bf442 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 63 146 4.3E-21 T 17-10-2018 IPR020069 Ribosomal protein L9, C-terminal BJD13_08480 f295f91ae547529402495a3a091bf442 149 Gene3D G3DSA:3.10.430.100 61 148 7.1E-24 T 17-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily BJD13_08480 f295f91ae547529402495a3a091bf442 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 17-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_08480 f295f91ae547529402495a3a091bf442 149 SUPERFAMILY SSF55653 61 147 1.31E-21 T 17-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily BJD13_08480 f295f91ae547529402495a3a091bf442 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 147 1.6E-41 T 17-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_08480 f295f91ae547529402495a3a091bf442 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 1.0E-20 T 17-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_08480 f295f91ae547529402495a3a091bf442 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 23.689 T 17-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_08480 f295f91ae547529402495a3a091bf442 149 Gene3D G3DSA:3.40.5.10 1 50 7.6E-22 T 17-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_08480 f295f91ae547529402495a3a091bf442 149 SUPERFAMILY SSF55658 1 57 7.85E-18 T 17-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal BJD13_08150 fc67e4bfbc99dc3c95ca12bd72b784c0 417 Pfam PF01943 Polysaccharide biosynthesis protein 3 275 7.8E-12 T 17-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 BJD13_18245 1e73a8514336f1eed46416ce107e2d80 351 Gene3D G3DSA:3.10.310.10 6 350 3.7E-115 T 17-10-2018 BJD13_18245 1e73a8514336f1eed46416ce107e2d80 351 SUPERFAMILY SSF54506 4 168 2.2E-62 T 17-10-2018 BJD13_18245 1e73a8514336f1eed46416ce107e2d80 351 Pfam PF04303 PrpF protein 4 350 5.5E-110 T 17-10-2018 IPR007400 PrpF protein BJD13_18245 1e73a8514336f1eed46416ce107e2d80 351 SUPERFAMILY SSF54506 172 350 1.65E-52 T 17-10-2018 BJD13_18245 1e73a8514336f1eed46416ce107e2d80 351 Gene3D G3DSA:3.10.310.10 167 336 3.7E-115 T 17-10-2018 BJD13_23635 ecb6af532e96768d0739cc2b0183aabf 824 Gene3D G3DSA:1.10.540.10 126 239 1.2E-97 T 17-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 BJD13_23635 ecb6af532e96768d0739cc2b0183aabf 824 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 141 236 6.3E-17 T 17-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 BJD13_23635 ecb6af532e96768d0739cc2b0183aabf 824 SUPERFAMILY SSF56645 123 359 1.31E-41 T 17-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 BJD13_23635 ecb6af532e96768d0739cc2b0183aabf 824 Gene3D G3DSA:2.40.110.10 240 363 1.2E-97 T 17-10-2018 BJD13_23635 ecb6af532e96768d0739cc2b0183aabf 824 SUPERFAMILY SSF47203 364 510 1.1E-25 T 17-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 BJD13_23635 ecb6af532e96768d0739cc2b0183aabf 824 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 364 509 4.4E-17 T 17-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 BJD13_23635 ecb6af532e96768d0739cc2b0183aabf 824 Pfam PF09317 Domain of unknown function (DUF1974) 518 801 3.6E-108 T 17-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 BJD13_23635 ecb6af532e96768d0739cc2b0183aabf 824 Gene3D G3DSA:1.20.140.10 364 510 1.2E-97 T 17-10-2018 BJD13_04205 12acb35e1152764eb703af25a2efdc13 161 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 121 131 - T 17-10-2018 IPR020549 Endoribonuclease YbeY, conserved site BJD13_04205 12acb35e1152764eb703af25a2efdc13 161 SUPERFAMILY SSF55486 24 157 1.37E-43 T 17-10-2018 BJD13_04205 12acb35e1152764eb703af25a2efdc13 161 Gene3D G3DSA:3.40.390.30 5 161 4.7E-50 T 17-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 BJD13_04205 12acb35e1152764eb703af25a2efdc13 161 Pfam PF02130 Uncharacterized protein family UPF0054 27 150 2.8E-34 T 17-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 BJD13_04205 12acb35e1152764eb703af25a2efdc13 161 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 43 152 4.8E-36 T 17-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 BJD13_04205 12acb35e1152764eb703af25a2efdc13 161 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 7 155 23.345 T 17-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 BJD13_05490 7667043c087ba88ed9207f3652446f29 420 SUPERFAMILY SSF51905 9 408 4.67E-40 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_05490 7667043c087ba88ed9207f3652446f29 420 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 10 403 2.9E-100 T 17-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like BJD13_05490 7667043c087ba88ed9207f3652446f29 420 TIGRFAM TIGR03862 flavo_PP4765: flavoprotein, TIGR03862 family 29 409 6.0E-185 T 17-10-2018 IPR022460 Conserved hyptotheical protein CHP03862, flavoprotein, PP4765 BJD13_05490 7667043c087ba88ed9207f3652446f29 420 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 6.0E-5 T 17-10-2018 BJD13_05490 7667043c087ba88ed9207f3652446f29 420 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 358 380 6.0E-5 T 17-10-2018 BJD13_05490 7667043c087ba88ed9207f3652446f29 420 Pfam PF03486 HI0933-like protein 9 403 1.4E-106 T 17-10-2018 BJD13_05490 7667043c087ba88ed9207f3652446f29 420 Gene3D G3DSA:1.10.8.260 279 334 1.2E-67 T 17-10-2018 IPR023166 HI0933-like insert domain superfamily BJD13_05490 7667043c087ba88ed9207f3652446f29 420 Gene3D G3DSA:2.40.30.10 195 351 1.2E-67 T 17-10-2018 BJD13_05490 7667043c087ba88ed9207f3652446f29 420 Gene3D G3DSA:3.50.50.60 11 398 1.2E-67 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_05490 7667043c087ba88ed9207f3652446f29 420 SUPERFAMILY SSF160996 194 349 1.57E-8 T 17-10-2018 BJD13_01120 c6cb614a7cd6e7594edce389999a693c 90 Gene3D G3DSA:1.10.1220.10 8 49 9.4E-7 T 17-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 BJD13_01120 c6cb614a7cd6e7594edce389999a693c 90 SUPERFAMILY SSF47598 2 42 3.95E-11 T 17-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 BJD13_01120 c6cb614a7cd6e7594edce389999a693c 90 Pfam PF01402 Ribbon-helix-helix protein, copG family 3 40 2.5E-7 T 17-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 BJD13_01260 c6cb614a7cd6e7594edce389999a693c 90 Gene3D G3DSA:1.10.1220.10 8 49 9.4E-7 T 17-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 BJD13_01260 c6cb614a7cd6e7594edce389999a693c 90 SUPERFAMILY SSF47598 2 42 3.95E-11 T 17-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 BJD13_01260 c6cb614a7cd6e7594edce389999a693c 90 Pfam PF01402 Ribbon-helix-helix protein, copG family 3 40 2.5E-7 T 17-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 BJD13_11485 19d31eca505ab5141a29ed05774cbb5d 428 SUPERFAMILY SSF57716 16 51 9.27E-12 T 17-10-2018 BJD13_11485 19d31eca505ab5141a29ed05774cbb5d 428 SMART SM01086 319 414 7.6E-34 T 17-10-2018 IPR019489 Clp ATPase, C-terminal BJD13_11485 19d31eca505ab5141a29ed05774cbb5d 428 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 14 414 6.1E-206 T 17-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 BJD13_11485 19d31eca505ab5141a29ed05774cbb5d 428 Gene3D G3DSA:1.10.8.60 318 426 9.8E-41 T 17-10-2018 BJD13_11485 19d31eca505ab5141a29ed05774cbb5d 428 Gene3D G3DSA:3.40.50.300 59 317 1.8E-109 T 17-10-2018 BJD13_11485 19d31eca505ab5141a29ed05774cbb5d 428 SMART SM00994 15 54 3.7E-24 T 17-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 BJD13_11485 19d31eca505ab5141a29ed05774cbb5d 428 Pfam PF06689 ClpX C4-type zinc finger 16 53 2.2E-20 T 17-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 BJD13_11485 19d31eca505ab5141a29ed05774cbb5d 428 SUPERFAMILY SSF52540 64 407 5.94E-71 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_11485 19d31eca505ab5141a29ed05774cbb5d 428 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 9 417 53.387 T 17-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 BJD13_11485 19d31eca505ab5141a29ed05774cbb5d 428 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 319 397 4.7E-17 T 17-10-2018 IPR019489 Clp ATPase, C-terminal BJD13_11485 19d31eca505ab5141a29ed05774cbb5d 428 Gene3D G3DSA:3.30.50.30 5 55 2.5E-25 T 17-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily BJD13_11485 19d31eca505ab5141a29ed05774cbb5d 428 SMART SM00382 113 266 1.1E-10 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_11485 19d31eca505ab5141a29ed05774cbb5d 428 Pfam PF07724 AAA domain (Cdc48 subfamily) 114 312 2.2E-50 T 17-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BJD13_10900 3119f038c16b9bea9219a73d98df7f72 600 Pfam PF03235 Protein of unknown function DUF262 11 251 1.2E-30 T 17-10-2018 IPR004919 Domain of unknown function DUF262 BJD13_21165 d8ff0a19f63dfbdf5be6ddcf22961068 242 Pfam PF00106 short chain dehydrogenase 3 190 5.9E-32 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_21165 d8ff0a19f63dfbdf5be6ddcf22961068 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 8.6E-12 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_21165 d8ff0a19f63dfbdf5be6ddcf22961068 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 8.6E-12 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_21165 d8ff0a19f63dfbdf5be6ddcf22961068 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 8.6E-12 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_21165 d8ff0a19f63dfbdf5be6ddcf22961068 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 8.6E-12 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_21165 d8ff0a19f63dfbdf5be6ddcf22961068 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 8.6E-12 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_21165 d8ff0a19f63dfbdf5be6ddcf22961068 242 Gene3D G3DSA:3.40.50.720 2 241 9.2E-44 T 17-10-2018 BJD13_21165 d8ff0a19f63dfbdf5be6ddcf22961068 242 SUPERFAMILY SSF51735 3 240 2.88E-43 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_21165 d8ff0a19f63dfbdf5be6ddcf22961068 242 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 135 163 - T 17-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BJD13_19235 3d81062de633ecfcb7d0d44bf7044a5d 407 Gene3D G3DSA:3.90.1860.10 12 407 5.8E-113 T 17-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 BJD13_19235 3d81062de633ecfcb7d0d44bf7044a5d 407 SUPERFAMILY SSF103365 18 407 1.44E-129 T 17-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 BJD13_19235 3d81062de633ecfcb7d0d44bf7044a5d 407 Pfam PF01139 tRNA-splicing ligase RtcB 35 407 1.1E-126 T 17-10-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 BJD13_22555 756d369d1d3b77e40ced23f0637ec423 654 SUPERFAMILY SSF51445 289 509 2.82E-22 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily BJD13_22555 756d369d1d3b77e40ced23f0637ec423 654 Gene3D G3DSA:2.70.98.10 21 283 1.4E-60 T 17-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 BJD13_22555 756d369d1d3b77e40ced23f0637ec423 654 Gene3D G3DSA:3.20.20.70 284 560 5.5E-104 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD13_22555 756d369d1d3b77e40ced23f0637ec423 654 Pfam PF10566 Glycoside hydrolase 97 289 558 3.9E-102 T 17-10-2018 IPR019563 Glycosyl-hydrolase 97, catalytic domain BJD13_22555 756d369d1d3b77e40ced23f0637ec423 654 Pfam PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation 561 651 9.4E-31 T 17-10-2018 IPR029483 Glycosyl-hydrolase 97, C-terminal oligomerisation domain BJD13_22555 756d369d1d3b77e40ced23f0637ec423 654 Gene3D G3DSA:2.60.40.1180 561 652 2.1E-30 T 17-10-2018 IPR013780 Glycosyl hydrolase, all-beta BJD13_22555 756d369d1d3b77e40ced23f0637ec423 654 Pfam PF14508 Glycosyl-hydrolase 97 N-terminal 30 285 4.0E-57 T 17-10-2018 IPR029486 Glycosyl-hydrolase 97, N-terminal domain BJD13_05300 43081b39287c32a454be48b661cf9656 362 SMART SM00382 29 212 5.0E-12 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_05300 43081b39287c32a454be48b661cf9656 362 SUPERFAMILY SSF50331 237 359 3.64E-30 T 17-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal BJD13_05300 43081b39287c32a454be48b661cf9656 362 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD13_05300 43081b39287c32a454be48b661cf9656 362 Gene3D G3DSA:2.40.50.940 223 352 3.0E-31 T 17-10-2018 BJD13_05300 43081b39287c32a454be48b661cf9656 362 Gene3D G3DSA:2.40.50.140 288 343 3.0E-31 T 17-10-2018 BJD13_05300 43081b39287c32a454be48b661cf9656 362 Pfam PF00005 ABC transporter 21 162 9.3E-30 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD13_05300 43081b39287c32a454be48b661cf9656 362 Gene3D G3DSA:3.40.50.300 3 222 5.7E-62 T 17-10-2018 BJD13_05300 43081b39287c32a454be48b661cf9656 362 SUPERFAMILY SSF52540 4 243 4.91E-82 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_05300 43081b39287c32a454be48b661cf9656 362 Pfam PF08402 TOBE domain 281 351 2.6E-9 T 17-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 BJD13_09520 8347ec581d24af15f74f37f3a10112ca 263 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 4.8E-6 T 17-10-2018 IPR001451 Hexapeptide repeat BJD13_09520 8347ec581d24af15f74f37f3a10112ca 263 Gene3D G3DSA:2.160.10.10 2 190 5.2E-50 T 17-10-2018 BJD13_09520 8347ec581d24af15f74f37f3a10112ca 263 SUPERFAMILY SSF51161 1 262 1.47E-72 T 17-10-2018 IPR011004 Trimeric LpxA-like superfamily BJD13_09520 8347ec581d24af15f74f37f3a10112ca 263 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 261 3.7E-103 T 17-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 BJD13_09520 8347ec581d24af15f74f37f3a10112ca 263 Gene3D G3DSA:1.20.1180.10 198 263 1.1E-21 T 17-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 BJD13_09520 8347ec581d24af15f74f37f3a10112ca 263 PIRSF PIRSF000456 4 263 1.1E-98 T 17-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 BJD13_09520 8347ec581d24af15f74f37f3a10112ca 263 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 263 44.908 T 17-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 BJD13_09520 8347ec581d24af15f74f37f3a10112ca 263 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 260 4.6E-25 T 17-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 BJD13_04140 c8b5d5c73584924f265bc61d8b725089 400 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 192 323 2.2E-15 T 17-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BJD13_04140 c8b5d5c73584924f265bc61d8b725089 400 SUPERFAMILY SSF111369 80 170 1.12E-12 T 17-10-2018 BJD13_04140 c8b5d5c73584924f265bc61d8b725089 400 Gene3D G3DSA:2.40.30.170 264 385 8.9E-37 T 17-10-2018 BJD13_04140 c8b5d5c73584924f265bc61d8b725089 400 Gene3D G3DSA:1.10.287.470 143 225 1.6E-5 T 17-10-2018 BJD13_04140 c8b5d5c73584924f265bc61d8b725089 400 Pfam PF13533 Biotin-lipoyl like 81 129 2.9E-16 T 17-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain BJD13_04140 c8b5d5c73584924f265bc61d8b725089 400 Gene3D G3DSA:2.40.50.100 80 114 2.5E-14 T 17-10-2018 BJD13_04140 c8b5d5c73584924f265bc61d8b725089 400 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 364 379 2.9E-6 T 17-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BJD13_04140 c8b5d5c73584924f265bc61d8b725089 400 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 92 112 2.9E-6 T 17-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BJD13_04140 c8b5d5c73584924f265bc61d8b725089 400 Gene3D G3DSA:1.10.287.470 115 142 2.5E-14 T 17-10-2018 BJD13_04140 c8b5d5c73584924f265bc61d8b725089 400 SUPERFAMILY SSF111369 190 319 8.11E-11 T 17-10-2018 BJD13_04855 20e3734bf68b1323cfc9f9cc58840b1b 456 Gene3D G3DSA:3.40.190.10 43 370 2.1E-150 T 17-10-2018 BJD13_04855 20e3734bf68b1323cfc9f9cc58840b1b 456 Gene3D G3DSA:3.40.190.10 143 407 2.1E-150 T 17-10-2018 BJD13_04855 20e3734bf68b1323cfc9f9cc58840b1b 456 SUPERFAMILY SSF53850 28 408 1.96E-88 T 17-10-2018 BJD13_04855 20e3734bf68b1323cfc9f9cc58840b1b 456 Pfam PF13416 Bacterial extracellular solute-binding protein 44 354 1.6E-43 T 17-10-2018 IPR006059 Bacterial extracellular solute-binding protein BJD13_22625 0c6b9577b50ede7ba65a79b8f9cfb5fd 66 SUPERFAMILY SSF54285 2 65 2.13E-18 T 17-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp BJD13_22625 0c6b9577b50ede7ba65a79b8f9cfb5fd 66 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 66 2.8E-23 T 17-10-2018 IPR010035 ThiS, thiamine-biosynthesis BJD13_22625 0c6b9577b50ede7ba65a79b8f9cfb5fd 66 Pfam PF02597 ThiS family 3 66 2.5E-15 T 17-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 BJD13_22625 0c6b9577b50ede7ba65a79b8f9cfb5fd 66 Gene3D G3DSA:3.10.20.30 1 66 1.7E-22 T 17-10-2018 IPR012675 Beta-grasp domain superfamily BJD13_01745 c93dc33a2a689a7f7f6110c77986823f 576 SUPERFAMILY SSF51621 250 548 5.76E-95 T 17-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 BJD13_01745 c93dc33a2a689a7f7f6110c77986823f 576 Pfam PF05524 PEP-utilising enzyme, N-terminal 6 129 1.3E-23 T 17-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 BJD13_01745 c93dc33a2a689a7f7f6110c77986823f 576 SUPERFAMILY SSF52009 116 235 3.53E-28 T 17-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 BJD13_01745 c93dc33a2a689a7f7f6110c77986823f 576 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 6 566 2.9E-150 T 17-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 BJD13_01745 c93dc33a2a689a7f7f6110c77986823f 576 Gene3D G3DSA:3.50.30.10 7 234 5.2E-61 T 17-10-2018 BJD13_01745 c93dc33a2a689a7f7f6110c77986823f 576 Pfam PF00391 PEP-utilising enzyme, mobile domain 155 226 1.3E-19 T 17-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 BJD13_01745 c93dc33a2a689a7f7f6110c77986823f 576 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 252 542 1.6E-95 T 17-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 BJD13_01745 c93dc33a2a689a7f7f6110c77986823f 576 SUPERFAMILY SSF47831 27 145 1.31E-25 T 17-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 BJD13_01745 c93dc33a2a689a7f7f6110c77986823f 576 Gene3D G3DSA:3.20.20.60 235 573 6.0E-109 T 17-10-2018 BJD13_01745 c93dc33a2a689a7f7f6110c77986823f 576 PIRSF PIRSF000732 1 575 1.9E-197 T 17-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 BJD13_01745 c93dc33a2a689a7f7f6110c77986823f 576 Gene3D G3DSA:1.10.274.10 24 148 5.2E-61 T 17-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 BJD13_01745 c93dc33a2a689a7f7f6110c77986823f 576 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 449 467 - T 17-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 BJD13_01745 c93dc33a2a689a7f7f6110c77986823f 576 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 449 464 1.6E-26 T 17-10-2018 BJD13_01745 c93dc33a2a689a7f7f6110c77986823f 576 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 466 481 1.6E-26 T 17-10-2018 BJD13_01745 c93dc33a2a689a7f7f6110c77986823f 576 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 294 313 1.6E-26 T 17-10-2018 BJD13_01745 c93dc33a2a689a7f7f6110c77986823f 576 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 502 514 1.6E-26 T 17-10-2018 BJD13_14045 786451a6a1a116cffcf0955778f0f945 213 Hamap MF_00650 Phosphoribosyl-dephospho-CoA transferase [mdcG]. 1 209 34.695 T 17-10-2018 IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 MetaCyc: PWY-5796 BJD13_14045 786451a6a1a116cffcf0955778f0f945 213 TIGRFAM TIGR03135 malonate_mdcG: malonate decarboxylase holo-[acyl-carrier-protein] synthase 4 203 2.9E-67 T 17-10-2018 IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 MetaCyc: PWY-5796 BJD13_14045 786451a6a1a116cffcf0955778f0f945 213 Pfam PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG 4 203 4.8E-61 T 17-10-2018 IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 MetaCyc: PWY-5796 BJD13_17890 e8a3d79c332b9e8c64df4695a7ca7a6b 2884 Gene3D G3DSA:1.25.10.10 979 1375 2.4E-26 T 17-10-2018 IPR011989 Armadillo-like helical BJD13_17890 e8a3d79c332b9e8c64df4695a7ca7a6b 2884 Gene3D G3DSA:1.25.10.10 341 671 7.7E-14 T 17-10-2018 IPR011989 Armadillo-like helical BJD13_17890 e8a3d79c332b9e8c64df4695a7ca7a6b 2884 SUPERFAMILY SSF48371 356 703 1.56E-29 T 17-10-2018 IPR016024 Armadillo-type fold BJD13_17890 e8a3d79c332b9e8c64df4695a7ca7a6b 2884 Gene3D G3DSA:1.25.10.10 686 952 2.0E-8 T 17-10-2018 IPR011989 Armadillo-like helical BJD13_17890 e8a3d79c332b9e8c64df4695a7ca7a6b 2884 SUPERFAMILY SSF48371 980 1356 5.76E-31 T 17-10-2018 IPR016024 Armadillo-type fold BJD13_17890 e8a3d79c332b9e8c64df4695a7ca7a6b 2884 SUPERFAMILY SSF48371 675 1026 1.08E-34 T 17-10-2018 IPR016024 Armadillo-type fold BJD13_17770 924637b92b9c9300620ac2fc06c72903 52 PIRSF PIRSF037205 1 52 6.0E-26 T 17-10-2018 IPR017136 Uncharacterised conserved protein UCP037205 BJD13_17770 924637b92b9c9300620ac2fc06c72903 52 Pfam PF10013 Uncharacterized protein conserved in bacteria (DUF2256) 5 43 2.3E-22 T 17-10-2018 IPR017136 Uncharacterised conserved protein UCP037205 BJD13_06800 67273cc41d9556081010186ff9eb4c59 102 Pfam PF13466 STAS domain 4 82 2.0E-13 T 17-10-2018 IPR002645 STAS domain BJD13_06800 67273cc41d9556081010186ff9eb4c59 102 SUPERFAMILY SSF52091 3 88 1.45E-10 T 17-10-2018 IPR036513 STAS domain superfamily BJD13_06800 67273cc41d9556081010186ff9eb4c59 102 Gene3D G3DSA:3.30.750.24 1 99 4.8E-9 T 17-10-2018 IPR036513 STAS domain superfamily BJD13_01320 c4de07ed62db21a49a3bdaad746e0b4f 356 Pfam PF14566 Inositol hexakisphosphate 141 283 9.5E-19 T 17-10-2018 BJD13_01320 c4de07ed62db21a49a3bdaad746e0b4f 356 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 263 273 - T 17-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 BJD13_01320 c4de07ed62db21a49a3bdaad746e0b4f 356 ProDom PD069361 HYDROLASE VIRULENCE PLASMID AVRBS1.1 HEXAPHOSPHATE TYROSINE PHOSPHOHYDROLASE PRECURSOR MYO-INOSITOL AVIRULENCE 251 350 7.0E-38 T 17-10-2018 BJD13_01320 c4de07ed62db21a49a3bdaad746e0b4f 356 Gene3D G3DSA:3.30.70.1690 162 234 3.3E-70 T 17-10-2018 BJD13_01320 c4de07ed62db21a49a3bdaad746e0b4f 356 SUPERFAMILY SSF52799 132 351 1.56E-24 T 17-10-2018 IPR029021 Protein-tyrosine phosphatase-like BJD13_01320 c4de07ed62db21a49a3bdaad746e0b4f 356 Gene3D G3DSA:3.90.190.10 90 350 3.3E-70 T 17-10-2018 IPR029021 Protein-tyrosine phosphatase-like BJD13_01320 c4de07ed62db21a49a3bdaad746e0b4f 356 SMART SM01301 140 283 5.4E-38 T 17-10-2018 BJD13_02315 4bc4340b463265b49b16c3e7748ea1f9 180 Gene3D G3DSA:3.40.630.30 8 177 1.6E-32 T 17-10-2018 BJD13_02315 4bc4340b463265b49b16c3e7748ea1f9 180 Pfam PF13302 Acetyltransferase (GNAT) domain 22 161 5.5E-8 T 17-10-2018 IPR000182 GNAT domain BJD13_02315 4bc4340b463265b49b16c3e7748ea1f9 180 SUPERFAMILY SSF55729 24 167 3.01E-17 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD13_10175 9c00825c9fb7a1dbcd6cf6333b51d0dc 85 SUPERFAMILY SSF54565 1 78 6.93E-29 T 17-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_10175 9c00825c9fb7a1dbcd6cf6333b51d0dc 85 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 17-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_10175 9c00825c9fb7a1dbcd6cf6333b51d0dc 85 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 24.527 T 17-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_10175 9c00825c9fb7a1dbcd6cf6333b51d0dc 85 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 5.6E-31 T 17-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_10175 9c00825c9fb7a1dbcd6cf6333b51d0dc 85 Pfam PF00886 Ribosomal protein S16 8 68 6.9E-24 T 17-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_10175 9c00825c9fb7a1dbcd6cf6333b51d0dc 85 Gene3D G3DSA:3.30.1320.10 1 82 4.5E-30 T 17-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_18320 fe79addd1ab574362547933993e79476 264 Gene3D G3DSA:1.25.40.10 2 88 8.7E-20 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_18320 fe79addd1ab574362547933993e79476 264 SUPERFAMILY SSF144059 4 263 6.93E-86 T 17-10-2018 BJD13_18320 fe79addd1ab574362547933993e79476 264 Pfam PF07024 ImpE protein 140 259 2.6E-39 T 17-10-2018 IPR009211 Predicted virulence protein, SciE type BJD13_18320 fe79addd1ab574362547933993e79476 264 PIRSF PIRSF029288 1 264 1.6E-98 T 17-10-2018 IPR009211 Predicted virulence protein, SciE type BJD13_15435 91782e6c7aa5f0b35de52180023bb078 142 Gene3D G3DSA:1.10.1660.10 3 134 8.0E-25 T 17-10-2018 BJD13_15435 91782e6c7aa5f0b35de52180023bb078 142 Pfam PF13411 MerR HTH family regulatory protein 10 70 1.4E-12 T 17-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD13_15435 91782e6c7aa5f0b35de52180023bb078 142 SUPERFAMILY SSF46955 9 123 1.36E-23 T 17-10-2018 IPR009061 Putative DNA-binding domain superfamily BJD13_15435 91782e6c7aa5f0b35de52180023bb078 142 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 10 21 1.8E-5 T 17-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD13_15435 91782e6c7aa5f0b35de52180023bb078 142 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 44 64 1.8E-5 T 17-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD13_15435 91782e6c7aa5f0b35de52180023bb078 142 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 21 34 1.8E-5 T 17-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD13_15435 91782e6c7aa5f0b35de52180023bb078 142 SMART SM00422 9 77 4.8E-15 T 17-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD13_23705 d4b41196d2293a966b94287646488e13 405 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 198 212 - T 17-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 BJD13_23705 d4b41196d2293a966b94287646488e13 405 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 15 388 2.1E-134 T 17-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 BJD13_23705 d4b41196d2293a966b94287646488e13 405 PIRSF PIRSF001434 3 392 1.1E-132 T 17-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 BJD13_23705 d4b41196d2293a966b94287646488e13 405 Gene3D G3DSA:3.40.640.10 11 255 2.2E-82 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD13_23705 d4b41196d2293a966b94287646488e13 405 SUPERFAMILY SSF53383 19 389 6.72E-117 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD13_23705 d4b41196d2293a966b94287646488e13 405 Gene3D G3DSA:3.90.1150.10 256 393 5.9E-53 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD13_23705 d4b41196d2293a966b94287646488e13 405 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 13 389 4.2E-178 T 17-10-2018 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|MetaCyc: PWY-801 BJD13_05275 20b64d7e1997338aab5654de4a6dd5e6 219 Pfam PF01081 KDPG and KHG aldolase 11 203 6.8E-64 T 17-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 BJD13_05275 20b64d7e1997338aab5654de4a6dd5e6 219 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 11 211 2.5E-78 T 17-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 BJD13_05275 20b64d7e1997338aab5654de4a6dd5e6 219 SUPERFAMILY SSF51569 7 213 1.34E-61 T 17-10-2018 BJD13_05275 20b64d7e1997338aab5654de4a6dd5e6 219 Gene3D G3DSA:3.20.20.70 1 215 2.3E-69 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD13_05275 20b64d7e1997338aab5654de4a6dd5e6 219 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 42 51 - T 17-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 BJD13_15465 32e754f577946bcb2908b60c0032f380 305 SUPERFAMILY SSF46785 6 110 1.77E-16 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_15465 32e754f577946bcb2908b60c0032f380 305 Pfam PF03466 LysR substrate binding domain 90 294 4.8E-34 T 17-10-2018 IPR005119 LysR, substrate-binding BJD13_15465 32e754f577946bcb2908b60c0032f380 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 64 6.6E-17 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_15465 32e754f577946bcb2908b60c0032f380 305 Gene3D G3DSA:3.40.190.290 92 301 3.5E-30 T 17-10-2018 BJD13_15465 32e754f577946bcb2908b60c0032f380 305 Gene3D G3DSA:1.10.10.10 5 86 7.2E-19 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_15465 32e754f577946bcb2908b60c0032f380 305 SUPERFAMILY SSF53850 92 299 4.65E-34 T 17-10-2018 BJD13_02150 02508d274d03f48435d5f87b7c738017 735 Gene3D G3DSA:3.30.365.20 401 732 1.6E-80 T 17-10-2018 BJD13_02150 02508d274d03f48435d5f87b7c738017 735 Gene3D G3DSA:3.30.365.10 188 280 9.0E-59 T 17-10-2018 BJD13_02150 02508d274d03f48435d5f87b7c738017 735 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 162 669 4.4E-119 T 17-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 BJD13_02150 02508d274d03f48435d5f87b7c738017 735 SUPERFAMILY SSF56003 156 731 1.02E-162 T 17-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 BJD13_02150 02508d274d03f48435d5f87b7c738017 735 SMART SM01008 32 138 9.6E-25 T 17-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead BJD13_02150 02508d274d03f48435d5f87b7c738017 735 Gene3D G3DSA:3.90.1170.50 4 136 8.9E-24 T 17-10-2018 BJD13_02150 02508d274d03f48435d5f87b7c738017 735 SUPERFAMILY SSF54665 10 135 6.93E-31 T 17-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily BJD13_02150 02508d274d03f48435d5f87b7c738017 735 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 32 135 2.2E-19 T 17-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead BJD13_02150 02508d274d03f48435d5f87b7c738017 735 Gene3D G3DSA:3.30.365.10 164 384 9.0E-59 T 17-10-2018 BJD13_08570 85b66db5c1a9097b3764ddef54298cb4 178 Pfam PF09374 Predicted Peptidoglycan domain 99 171 3.4E-15 T 17-10-2018 IPR018537 Peptidoglycan binding domain BJD13_08570 85b66db5c1a9097b3764ddef54298cb4 178 Gene3D G3DSA:1.20.141.10 1 175 1.3E-55 T 17-10-2018 BJD13_08570 85b66db5c1a9097b3764ddef54298cb4 178 SUPERFAMILY SSF53955 1 174 2.5E-50 T 17-10-2018 IPR023346 Lysozyme-like domain superfamily BJD13_08570 85b66db5c1a9097b3764ddef54298cb4 178 Pfam PF05838 Glycosyl hydrolase 108 10 97 5.7E-26 T 17-10-2018 IPR008565 Protein of unknown function DUF847 BJD13_10140 a9846194b4ae70a57643bbfbe1295714 218 Gene3D G3DSA:1.20.1050.10 84 187 4.7E-48 T 17-10-2018 BJD13_10140 a9846194b4ae70a57643bbfbe1295714 218 SUPERFAMILY SSF52833 5 85 1.12E-22 T 17-10-2018 IPR036249 Thioredoxin-like superfamily BJD13_10140 a9846194b4ae70a57643bbfbe1295714 218 Gene3D G3DSA:3.40.30.10 7 190 4.7E-48 T 17-10-2018 BJD13_10140 a9846194b4ae70a57643bbfbe1295714 218 Pfam PF00043 Glutathione S-transferase, C-terminal domain 131 188 9.9E-5 T 17-10-2018 IPR004046 Glutathione S-transferase, C-terminal BJD13_10140 a9846194b4ae70a57643bbfbe1295714 218 Pfam PF13417 Glutathione S-transferase, N-terminal domain 7 81 7.6E-15 T 17-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 BJD13_10140 a9846194b4ae70a57643bbfbe1295714 218 SUPERFAMILY SSF47616 83 195 4.18E-17 T 17-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily BJD13_19410 0d5eb3e44aaaeb41a18440dffd31cbe6 113 PIRSF PIRSF028440 3 113 2.1E-46 T 17-10-2018 IPR014546 Uncharacterised conserved protein, lipid A biosynthesis BJD13_19410 0d5eb3e44aaaeb41a18440dffd31cbe6 113 Pfam PF07578 Lipid A Biosynthesis N-terminal domain 26 98 4.0E-21 T 17-10-2018 IPR011499 Lipid A biosynthesis, N-terminal GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 BJD13_19410 0d5eb3e44aaaeb41a18440dffd31cbe6 113 SMART SM01259 26 99 7.4E-22 T 17-10-2018 IPR011499 Lipid A biosynthesis, N-terminal GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 BJD13_19410 0d5eb3e44aaaeb41a18440dffd31cbe6 113 ProDom PD339292 LIPID A SYNTHASE LIPID-A-DISACCHARIDE TRANSFERASE GLYCOSYLTRANSFERASE BIOSYNTHESIS N-TERMINAL BIOSYNTHESIS SYNTHESIS 21 104 6.0E-42 T 17-10-2018 IPR011499 Lipid A biosynthesis, N-terminal GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 BJD13_01285 3c9569ba3496907ba7036d7afe9bf824 161 Pfam PF02627 Carboxymuconolactone decarboxylase family 46 131 3.6E-17 T 17-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 BJD13_01285 3c9569ba3496907ba7036d7afe9bf824 161 Gene3D G3DSA:1.20.1290.10 16 139 1.9E-31 T 17-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 BJD13_01285 3c9569ba3496907ba7036d7afe9bf824 161 SUPERFAMILY SSF69118 13 141 3.93E-29 T 17-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 BJD13_01145 3c9569ba3496907ba7036d7afe9bf824 161 Pfam PF02627 Carboxymuconolactone decarboxylase family 46 131 3.6E-17 T 17-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 BJD13_01145 3c9569ba3496907ba7036d7afe9bf824 161 Gene3D G3DSA:1.20.1290.10 16 139 1.9E-31 T 17-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 BJD13_01145 3c9569ba3496907ba7036d7afe9bf824 161 SUPERFAMILY SSF69118 13 141 3.93E-29 T 17-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 BJD13_20735 a2b56ba02bb9f2b2e0694f75618f317c 678 SUPERFAMILY SSF55874 353 525 9.56E-48 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_20735 a2b56ba02bb9f2b2e0694f75618f317c 678 SMART SM00086 229 271 3.5E-6 T 17-10-2018 IPR001610 PAC motif BJD13_20735 a2b56ba02bb9f2b2e0694f75618f317c 678 SMART SM00388 298 364 7.8E-15 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_20735 a2b56ba02bb9f2b2e0694f75618f317c 678 Gene3D G3DSA:3.30.450.20 152 267 1.1E-25 T 17-10-2018 BJD13_20735 a2b56ba02bb9f2b2e0694f75618f317c 678 SMART SM00387 410 523 3.7E-42 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_20735 a2b56ba02bb9f2b2e0694f75618f317c 678 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 410 522 3.6E-29 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_20735 a2b56ba02bb9f2b2e0694f75618f317c 678 Gene3D G3DSA:3.30.450.20 29 151 6.2E-17 T 17-10-2018 BJD13_20735 a2b56ba02bb9f2b2e0694f75618f317c 678 SUPERFAMILY SSF55785 142 269 1.33E-28 T 17-10-2018 IPR035965 PAS domain superfamily BJD13_20735 a2b56ba02bb9f2b2e0694f75618f317c 678 SMART SM00448 552 670 4.2E-29 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_20735 a2b56ba02bb9f2b2e0694f75618f317c 678 Gene3D G3DSA:3.30.565.10 363 526 3.2E-46 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_20735 a2b56ba02bb9f2b2e0694f75618f317c 678 Pfam PF00072 Response regulator receiver domain 555 671 9.4E-22 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_20735 a2b56ba02bb9f2b2e0694f75618f317c 678 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 153 276 1.1E-16 T 17-10-2018 IPR000014 PAS domain BJD13_20735 a2b56ba02bb9f2b2e0694f75618f317c 678 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 30 152 1.5E-6 T 17-10-2018 IPR000014 PAS domain BJD13_20735 a2b56ba02bb9f2b2e0694f75618f317c 678 Gene3D G3DSA:3.40.50.12740 551 678 4.2E-31 T 17-10-2018 BJD13_20735 a2b56ba02bb9f2b2e0694f75618f317c 678 Pfam PF00512 His Kinase A (phospho-acceptor) domain 299 361 1.6E-14 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_20735 a2b56ba02bb9f2b2e0694f75618f317c 678 SUPERFAMILY SSF55785 57 153 7.15E-11 T 17-10-2018 IPR035965 PAS domain superfamily BJD13_20735 a2b56ba02bb9f2b2e0694f75618f317c 678 Pfam PF08448 PAS fold 164 273 5.8E-14 T 17-10-2018 IPR013656 PAS fold-4 BJD13_20735 a2b56ba02bb9f2b2e0694f75618f317c 678 SUPERFAMILY SSF52172 550 675 5.98E-32 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_20735 a2b56ba02bb9f2b2e0694f75618f317c 678 SMART SM00091 30 102 42.0 T 17-10-2018 IPR000014 PAS domain BJD13_20735 a2b56ba02bb9f2b2e0694f75618f317c 678 SMART SM00091 157 223 6.0E-9 T 17-10-2018 IPR000014 PAS domain BJD13_20735 a2b56ba02bb9f2b2e0694f75618f317c 678 SUPERFAMILY SSF47384 284 361 1.02E-16 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD13_20735 a2b56ba02bb9f2b2e0694f75618f317c 678 Gene3D G3DSA:1.10.287.130 268 361 1.2E-19 T 17-10-2018 BJD13_20735 a2b56ba02bb9f2b2e0694f75618f317c 678 PRINTS PR00344 Bacterial sensor protein C-terminal signature 507 520 3.0E-16 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_20735 a2b56ba02bb9f2b2e0694f75618f317c 678 PRINTS PR00344 Bacterial sensor protein C-terminal signature 447 461 3.0E-16 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_20735 a2b56ba02bb9f2b2e0694f75618f317c 678 PRINTS PR00344 Bacterial sensor protein C-terminal signature 482 500 3.0E-16 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_20735 a2b56ba02bb9f2b2e0694f75618f317c 678 PRINTS PR00344 Bacterial sensor protein C-terminal signature 465 475 3.0E-16 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_20735 a2b56ba02bb9f2b2e0694f75618f317c 678 Pfam PF13426 PAS domain 59 144 0.012 T 17-10-2018 IPR000014 PAS domain BJD13_13760 a45461a74faa9cd51b0a58fa357d4a2d 157 Gene3D G3DSA:1.10.10.10 1 141 2.9E-38 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_13760 a45461a74faa9cd51b0a58fa357d4a2d 157 SUPERFAMILY SSF46785 3 135 1.45E-29 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_13760 a45461a74faa9cd51b0a58fa357d4a2d 157 Pfam PF02082 Transcriptional regulator 1 81 6.6E-22 T 17-10-2018 IPR000944 Transcription regulator Rrf2-type BJD13_07725 b95865e156c0dce30c7a6f3459bfed10 638 SUPERFAMILY SSF49785 248 366 3.64E-19 T 17-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD13_07725 b95865e156c0dce30c7a6f3459bfed10 638 Gene3D G3DSA:3.40.50.1110 105 242 5.6E-7 T 17-10-2018 IPR036514 SGNH hydrolase superfamily BJD13_07725 b95865e156c0dce30c7a6f3459bfed10 638 Gene3D G3DSA:2.60.120.260 243 379 4.0E-22 T 17-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD13_07725 b95865e156c0dce30c7a6f3459bfed10 638 Pfam PF13364 Beta-galactosidase jelly roll domain 250 356 3.7E-8 T 17-10-2018 IPR025300 Beta-galactosidase jelly roll domain KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024096|Reactome: R-HSA-2206308|Reactome: R-HSA-4085001|Reactome: R-HSA-6798695 BJD13_07725 b95865e156c0dce30c7a6f3459bfed10 638 SUPERFAMILY SSF52266 105 589 1.56E-74 T 17-10-2018 BJD13_07725 b95865e156c0dce30c7a6f3459bfed10 638 Pfam PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase 106 210 2.8E-7 T 17-10-2018 IPR005181 Sialate O-acetylesterase domain BJD13_07725 b95865e156c0dce30c7a6f3459bfed10 638 Pfam PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase 405 526 2.7E-12 T 17-10-2018 IPR005181 Sialate O-acetylesterase domain BJD13_07725 b95865e156c0dce30c7a6f3459bfed10 638 Gene3D G3DSA:3.40.50.1110 380 538 1.3E-12 T 17-10-2018 IPR036514 SGNH hydrolase superfamily BJD13_10975 f461e41326057b4e7dfab948f04b74c3 806 Gene3D G3DSA:3.40.710.10 272 625 1.5E-71 T 17-10-2018 BJD13_10975 f461e41326057b4e7dfab948f04b74c3 806 Pfam PF00905 Penicillin binding protein transpeptidase domain 325 544 1.9E-14 T 17-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 BJD13_10975 f461e41326057b4e7dfab948f04b74c3 806 Gene3D G3DSA:1.10.3810.10 76 271 4.5E-50 T 17-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BJD13_10975 f461e41326057b4e7dfab948f04b74c3 806 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 721 802 2.0E-14 T 17-10-2018 IPR009647 Penicillin-binding, C-terminal KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BJD13_10975 f461e41326057b4e7dfab948f04b74c3 806 Pfam PF00912 Transglycosylase 73 248 5.0E-45 T 17-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BJD13_10975 f461e41326057b4e7dfab948f04b74c3 806 SUPERFAMILY SSF56601 230 654 4.51E-97 T 17-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BJD13_10975 f461e41326057b4e7dfab948f04b74c3 806 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 56 804 1.7E-232 T 17-10-2018 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BJD13_10975 f461e41326057b4e7dfab948f04b74c3 806 SUPERFAMILY SSF53955 62 278 6.47E-62 T 17-10-2018 IPR023346 Lysozyme-like domain superfamily BJD13_08325 ae4ca5b98f21b184fcfcb7a566f2c08f 449 TIGRFAM TIGR00414 serS: serine--tRNA ligase 24 442 1.0E-162 T 17-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BJD13_08325 ae4ca5b98f21b184fcfcb7a566f2c08f 449 Gene3D G3DSA:3.30.930.10 129 449 2.7E-117 T 17-10-2018 BJD13_08325 ae4ca5b98f21b184fcfcb7a566f2c08f 449 SUPERFAMILY SSF46589 24 136 2.62E-26 T 17-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 BJD13_08325 ae4ca5b98f21b184fcfcb7a566f2c08f 449 Hamap MF_00176 Serine--tRNA ligase [serS]. 24 447 39.657 T 17-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BJD13_08325 ae4ca5b98f21b184fcfcb7a566f2c08f 449 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 24 131 2.6E-29 T 17-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 BJD13_08325 ae4ca5b98f21b184fcfcb7a566f2c08f 449 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 249 425 1.1E-33 T 17-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD13_08325 ae4ca5b98f21b184fcfcb7a566f2c08f 449 SUPERFAMILY SSF55681 140 444 1.26E-98 T 17-10-2018 BJD13_08325 ae4ca5b98f21b184fcfcb7a566f2c08f 449 PIRSF PIRSF001529 24 449 6.2E-169 T 17-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BJD13_08325 ae4ca5b98f21b184fcfcb7a566f2c08f 449 Gene3D G3DSA:1.10.287.40 24 128 2.7E-17 T 17-10-2018 BJD13_08325 ae4ca5b98f21b184fcfcb7a566f2c08f 449 PRINTS PR00981 Seryl-tRNA synthetase signature 301 314 3.1E-33 T 17-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BJD13_08325 ae4ca5b98f21b184fcfcb7a566f2c08f 449 PRINTS PR00981 Seryl-tRNA synthetase signature 376 392 3.1E-33 T 17-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BJD13_08325 ae4ca5b98f21b184fcfcb7a566f2c08f 449 PRINTS PR00981 Seryl-tRNA synthetase signature 358 374 3.1E-33 T 17-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BJD13_08325 ae4ca5b98f21b184fcfcb7a566f2c08f 449 PRINTS PR00981 Seryl-tRNA synthetase signature 341 354 3.1E-33 T 17-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BJD13_08325 ae4ca5b98f21b184fcfcb7a566f2c08f 449 PRINTS PR00981 Seryl-tRNA synthetase signature 289 301 3.1E-33 T 17-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BJD13_13310 2e6bdb80312712e56505087339fec411 252 Pfam PF10001 Uncharacterized protein conserved in bacteria (DUF2242) 54 173 9.2E-49 T 17-10-2018 IPR018718 Protein of unknown function DUF2242 BJD13_07300 f1071c902d863f8d0cbb0c8f51f4a37e 124 SUPERFAMILY SSF54593 4 123 3.36E-17 T 17-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD13_07300 f1071c902d863f8d0cbb0c8f51f4a37e 124 Gene3D G3DSA:3.10.180.10 10 123 8.2E-16 T 17-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD13_05380 a44a89e99b097856aae1a3a519a881d5 589 Gene3D G3DSA:1.20.1560.10 2 333 1.3E-69 T 17-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BJD13_05380 a44a89e99b097856aae1a3a519a881d5 589 SUPERFAMILY SSF52540 335 584 2.15E-87 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_05380 a44a89e99b097856aae1a3a519a881d5 589 SUPERFAMILY SSF90123 18 332 5.23E-66 T 17-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BJD13_05380 a44a89e99b097856aae1a3a519a881d5 589 Pfam PF00664 ABC transporter transmembrane region 32 298 2.9E-39 T 17-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 BJD13_05380 a44a89e99b097856aae1a3a519a881d5 589 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 16 586 9.6E-240 T 17-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 BJD13_05380 a44a89e99b097856aae1a3a519a881d5 589 Gene3D G3DSA:3.40.50.300 334 585 3.3E-88 T 17-10-2018 BJD13_05380 a44a89e99b097856aae1a3a519a881d5 589 ProSitePatterns PS00211 ABC transporters family signature. 485 499 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD13_05380 a44a89e99b097856aae1a3a519a881d5 589 Pfam PF00005 ABC transporter 363 513 1.4E-31 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD13_05380 a44a89e99b097856aae1a3a519a881d5 589 SMART SM00382 372 559 7.4E-18 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_05630 3def039ff4c7fd90f8696b8b365b98f6 267 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 17-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BJD13_05630 3def039ff4c7fd90f8696b8b365b98f6 267 SUPERFAMILY SSF51735 6 261 2.84E-68 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_05630 3def039ff4c7fd90f8696b8b365b98f6 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.7E-31 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_05630 3def039ff4c7fd90f8696b8b365b98f6 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.7E-31 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_05630 3def039ff4c7fd90f8696b8b365b98f6 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.7E-31 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_05630 3def039ff4c7fd90f8696b8b365b98f6 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 225 245 1.7E-31 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_05630 3def039ff4c7fd90f8696b8b365b98f6 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 1.7E-31 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_05630 3def039ff4c7fd90f8696b8b365b98f6 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.7E-31 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_05630 3def039ff4c7fd90f8696b8b365b98f6 267 Gene3D G3DSA:3.40.50.720 1 265 4.0E-70 T 17-10-2018 BJD13_05630 3def039ff4c7fd90f8696b8b365b98f6 267 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 260 5.2E-53 T 17-10-2018 BJD13_05630 3def039ff4c7fd90f8696b8b365b98f6 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 6.3E-6 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_05630 3def039ff4c7fd90f8696b8b365b98f6 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 6.3E-6 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_05630 3def039ff4c7fd90f8696b8b365b98f6 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 6.3E-6 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_06805 db55198561e1532a6010cd7c057e8e09 121 SMART SM00448 3 116 1.2E-36 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_06805 db55198561e1532a6010cd7c057e8e09 121 Gene3D G3DSA:3.40.50.12740 1 121 2.9E-38 T 17-10-2018 BJD13_06805 db55198561e1532a6010cd7c057e8e09 121 SUPERFAMILY SSF52172 3 121 3.13E-36 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_06805 db55198561e1532a6010cd7c057e8e09 121 Pfam PF00072 Response regulator receiver domain 5 116 1.5E-27 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_14635 989386d83b918c188fc7e29e9fb301f3 298 Hamap MF_01972 Tryptophan 2,3-dioxygenase [kynA]. 17 282 39.031 T 17-10-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 BJD13_14635 989386d83b918c188fc7e29e9fb301f3 298 Pfam PF03301 Tryptophan 2,3-dioxygenase 208 281 6.0E-21 T 17-10-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 BJD13_14635 989386d83b918c188fc7e29e9fb301f3 298 Pfam PF03301 Tryptophan 2,3-dioxygenase 18 144 5.2E-41 T 17-10-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 BJD13_14635 989386d83b918c188fc7e29e9fb301f3 298 SUPERFAMILY SSF140959 23 282 1.11E-96 T 17-10-2018 IPR037217 Tryptophan/Indoleamine 2,3-dioxygenase-like GO:0019441|GO:0020037|GO:0046872 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 BJD13_14635 989386d83b918c188fc7e29e9fb301f3 298 Gene3D G3DSA:1.20.58.480 21 290 2.4E-109 T 17-10-2018 BJD13_04500 db996449551b7d7892ba0cac4d210028 254 PIRSF PIRSF004808 2 251 5.2E-70 T 17-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 BJD13_04500 db996449551b7d7892ba0cac4d210028 254 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 5 244 5.7E-66 T 17-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 BJD13_04500 db996449551b7d7892ba0cac4d210028 254 SUPERFAMILY SSF75217 6 167 3.73E-36 T 17-10-2018 IPR029028 Alpha/beta knot methyltransferases BJD13_04500 db996449551b7d7892ba0cac4d210028 254 Gene3D G3DSA:3.40.1280.10 3 168 5.6E-62 T 17-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BJD13_04500 db996449551b7d7892ba0cac4d210028 254 Pfam PF00588 SpoU rRNA Methylase family 7 157 2.3E-35 T 17-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 BJD13_04500 db996449551b7d7892ba0cac4d210028 254 Gene3D G3DSA:1.10.8.590 180 252 6.1E-17 T 17-10-2018 BJD13_18010 35e53f4a7c9cbeb1bd1dd1a912d624eb 799 Gene3D G3DSA:1.50.10.10 333 719 3.7E-108 T 17-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 BJD13_18010 35e53f4a7c9cbeb1bd1dd1a912d624eb 799 SUPERFAMILY SSF74650 15 289 4.08E-71 T 17-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 BJD13_18010 35e53f4a7c9cbeb1bd1dd1a912d624eb 799 Gene3D G3DSA:2.70.98.40 75 321 4.8E-40 T 17-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily BJD13_18010 35e53f4a7c9cbeb1bd1dd1a912d624eb 799 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 326 724 1.4E-60 T 17-10-2018 IPR033432 Glycosyl hydrolase 36, catalytic domain BJD13_18010 35e53f4a7c9cbeb1bd1dd1a912d624eb 799 Pfam PF06165 Glycosyltransferase family 36 88 287 9.4E-24 T 17-10-2018 IPR010383 Glycosyl hydrolase 94 BJD13_18010 35e53f4a7c9cbeb1bd1dd1a912d624eb 799 Gene3D G3DSA:2.60.420.10 720 798 7.6E-11 T 17-10-2018 BJD13_18010 35e53f4a7c9cbeb1bd1dd1a912d624eb 799 SUPERFAMILY SSF48208 294 797 1.22E-79 T 17-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 BJD13_12170 476949e153a4455e7b24255587312d93 485 PIRSF PIRSF000204 8 479 4.7E-158 T 17-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 BJD13_12170 476949e153a4455e7b24255587312d93 485 Pfam PF02233 NAD(P) transhydrogenase beta subunit 15 475 8.6E-167 T 17-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 BJD13_12170 476949e153a4455e7b24255587312d93 485 Gene3D G3DSA:3.40.50.1220 296 480 4.6E-79 T 17-10-2018 BJD13_12170 476949e153a4455e7b24255587312d93 485 SUPERFAMILY SSF52467 306 478 6.25E-70 T 17-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily BJD13_03795 6d7ad4ef710f32f2cfe23522985074ae 523 SUPERFAMILY SSF54897 4 161 5.61E-39 T 17-10-2018 BJD13_03795 6d7ad4ef710f32f2cfe23522985074ae 523 Pfam PF09286 Pro-kumamolisin, activation domain 18 149 5.2E-15 T 17-10-2018 IPR015366 Peptidase S53, activation domain GO:0008236 Reactome: R-HSA-381038 BJD13_03795 6d7ad4ef710f32f2cfe23522985074ae 523 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 448 458 - T 17-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site BJD13_03795 6d7ad4ef710f32f2cfe23522985074ae 523 Pfam PF00082 Subtilase family 268 467 1.7E-10 T 17-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 BJD13_03795 6d7ad4ef710f32f2cfe23522985074ae 523 SUPERFAMILY SSF52743 184 520 8.64E-65 T 17-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BJD13_03795 6d7ad4ef710f32f2cfe23522985074ae 523 Gene3D G3DSA:3.40.50.200 184 521 1.1E-98 T 17-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BJD13_03795 6d7ad4ef710f32f2cfe23522985074ae 523 SMART SM00944 13 151 4.4E-26 T 17-10-2018 IPR015366 Peptidase S53, activation domain GO:0008236 Reactome: R-HSA-381038 BJD13_21665 d5b7e61a899f4a5a6b53c6848024e8a2 423 Pfam PF00155 Aminotransferase class I and II 39 390 2.5E-52 T 17-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BJD13_21665 d5b7e61a899f4a5a6b53c6848024e8a2 423 Gene3D G3DSA:3.40.640.10 58 299 9.7E-123 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD13_21665 d5b7e61a899f4a5a6b53c6848024e8a2 423 SUPERFAMILY SSF53383 10 405 6.84E-91 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD13_21665 d5b7e61a899f4a5a6b53c6848024e8a2 423 Gene3D G3DSA:3.90.1150.10 28 402 9.7E-123 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD13_11355 3ba1c808827621954a07d0f9fae8994b 249 Pfam PF12706 Beta-lactamase superfamily domain 32 189 1.4E-13 T 17-10-2018 IPR001279 Metallo-beta-lactamase BJD13_11355 3ba1c808827621954a07d0f9fae8994b 249 SUPERFAMILY SSF56281 6 215 3.41E-27 T 17-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BJD13_11355 3ba1c808827621954a07d0f9fae8994b 249 SMART SM00849 19 192 6.3E-4 T 17-10-2018 IPR001279 Metallo-beta-lactamase BJD13_11355 3ba1c808827621954a07d0f9fae8994b 249 Gene3D G3DSA:3.60.15.10 11 240 2.0E-23 T 17-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BJD13_13780 d63a38f0ac8f008e773da5efa79c5303 775 SUPERFAMILY SSF82171 62 494 4.58E-37 T 17-10-2018 BJD13_13780 d63a38f0ac8f008e773da5efa79c5303 775 Pfam PF00326 Prolyl oligopeptidase family 562 758 8.7E-47 T 17-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 BJD13_13780 d63a38f0ac8f008e773da5efa79c5303 775 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 120 472 6.4E-70 T 17-10-2018 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 BJD13_13780 d63a38f0ac8f008e773da5efa79c5303 775 Gene3D G3DSA:2.140.10.30 92 488 2.2E-90 T 17-10-2018 IPR038554 Dipeptidylpeptidase IV, N-terminal domain superfamily BJD13_13780 d63a38f0ac8f008e773da5efa79c5303 775 Gene3D G3DSA:3.40.50.1820 500 756 6.2E-55 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_13780 d63a38f0ac8f008e773da5efa79c5303 775 SUPERFAMILY SSF53474 503 758 1.37E-56 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_04685 dba1b385c8ec2f4dc3989937df025e2a 384 PIRSF PIRSF000729 17 384 6.6E-133 T 17-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 BJD13_04685 dba1b385c8ec2f4dc3989937df025e2a 384 Pfam PF01472 PUA domain 290 367 7.2E-22 T 17-10-2018 IPR002478 PUA domain GO:0003723 BJD13_04685 dba1b385c8ec2f4dc3989937df025e2a 384 PRINTS PR00474 Glutamate 5-kinase family signature 222 242 1.7E-39 T 17-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 BJD13_04685 dba1b385c8ec2f4dc3989937df025e2a 384 PRINTS PR00474 Glutamate 5-kinase family signature 57 71 1.7E-39 T 17-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 BJD13_04685 dba1b385c8ec2f4dc3989937df025e2a 384 PRINTS PR00474 Glutamate 5-kinase family signature 161 188 1.7E-39 T 17-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 BJD13_04685 dba1b385c8ec2f4dc3989937df025e2a 384 PRINTS PR00474 Glutamate 5-kinase family signature 129 150 1.7E-39 T 17-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 BJD13_04685 dba1b385c8ec2f4dc3989937df025e2a 384 Gene3D G3DSA:2.30.130.10 279 384 7.4E-29 T 17-10-2018 IPR036974 PUA domain superfamily GO:0003723 BJD13_04685 dba1b385c8ec2f4dc3989937df025e2a 384 Pfam PF00696 Amino acid kinase family 21 248 6.5E-37 T 17-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 BJD13_04685 dba1b385c8ec2f4dc3989937df025e2a 384 TIGRFAM TIGR01027 proB: glutamate 5-kinase 21 382 3.4E-122 T 17-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 BJD13_04685 dba1b385c8ec2f4dc3989937df025e2a 384 ProSitePatterns PS00902 Glutamate 5-kinase signature. 220 237 - T 17-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 BJD13_04685 dba1b385c8ec2f4dc3989937df025e2a 384 Gene3D G3DSA:3.40.1160.10 12 278 6.6E-76 T 17-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BJD13_04685 dba1b385c8ec2f4dc3989937df025e2a 384 SMART SM00359 290 376 8.9E-18 T 17-10-2018 IPR002478 PUA domain GO:0003723 BJD13_04685 dba1b385c8ec2f4dc3989937df025e2a 384 SUPERFAMILY SSF53633 20 269 7.59E-59 T 17-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BJD13_04685 dba1b385c8ec2f4dc3989937df025e2a 384 Hamap MF_00456 Glutamate 5-kinase [proB]. 20 272 34.973 T 17-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 BJD13_04685 dba1b385c8ec2f4dc3989937df025e2a 384 SUPERFAMILY SSF88697 290 383 1.33E-21 T 17-10-2018 IPR015947 PUA-like superfamily BJD13_22485 f1b39d837904237a4e9fdff02ccc50b0 241 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 8 239 41.164 T 17-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 BJD13_22485 f1b39d837904237a4e9fdff02ccc50b0 241 PIRSF PIRSF000857 4 241 5.3E-61 T 17-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 BJD13_22485 f1b39d837904237a4e9fdff02ccc50b0 241 SUPERFAMILY SSF52402 16 204 5.09E-58 T 17-10-2018 BJD13_22485 f1b39d837904237a4e9fdff02ccc50b0 241 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 17 238 3.9E-89 T 17-10-2018 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8 BJD13_22485 f1b39d837904237a4e9fdff02ccc50b0 241 Gene3D G3DSA:3.40.50.620 7 241 1.9E-68 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD13_22485 f1b39d837904237a4e9fdff02ccc50b0 241 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 44 215 7.2E-54 T 17-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 BJD13_22485 f1b39d837904237a4e9fdff02ccc50b0 241 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 29 239 3.9E-83 T 17-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 BJD13_02555 b7daf783cff727216f0c8f360c905bf1 240 SUPERFAMILY SSF55120 67 230 1.46E-35 T 17-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD13_02555 b7daf783cff727216f0c8f360c905bf1 240 Gene3D G3DSA:3.30.70.1560 135 208 2.1E-50 T 17-10-2018 BJD13_02555 b7daf783cff727216f0c8f360c905bf1 240 Pfam PF01479 S4 domain 4 48 2.5E-9 T 17-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_02555 b7daf783cff727216f0c8f360c905bf1 240 SUPERFAMILY SSF55174 3 58 1.53E-12 T 17-10-2018 BJD13_02555 b7daf783cff727216f0c8f360c905bf1 240 Pfam PF00849 RNA pseudouridylate synthase 70 149 8.0E-13 T 17-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD13_02555 b7daf783cff727216f0c8f360c905bf1 240 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 74 226 2.5E-46 T 17-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 BJD13_02555 b7daf783cff727216f0c8f360c905bf1 240 Gene3D G3DSA:3.10.290.10 1 59 3.5E-19 T 17-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 BJD13_02555 b7daf783cff727216f0c8f360c905bf1 240 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 105 119 - T 17-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 BJD13_02555 b7daf783cff727216f0c8f360c905bf1 240 Gene3D G3DSA:3.30.70.580 71 229 2.1E-50 T 17-10-2018 BJD13_02555 b7daf783cff727216f0c8f360c905bf1 240 SMART SM00363 3 62 8.5E-8 T 17-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_22415 5fed39ab0714928943db0507fc9d5c14 488 Pfam PF02887 Pyruvate kinase, alpha/beta domain 360 473 4.9E-24 T 17-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BJD13_22415 5fed39ab0714928943db0507fc9d5c14 488 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 476 3.2E-157 T 17-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BJD13_22415 5fed39ab0714928943db0507fc9d5c14 488 Gene3D G3DSA:3.20.20.60 6 338 9.5E-158 T 17-10-2018 BJD13_22415 5fed39ab0714928943db0507fc9d5c14 488 SUPERFAMILY SSF52935 327 476 1.57E-34 T 17-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BJD13_22415 5fed39ab0714928943db0507fc9d5c14 488 PRINTS PR01050 Pyruvate kinase family signature 272 296 4.8E-56 T 17-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BJD13_22415 5fed39ab0714928943db0507fc9d5c14 488 PRINTS PR01050 Pyruvate kinase family signature 63 79 4.8E-56 T 17-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BJD13_22415 5fed39ab0714928943db0507fc9d5c14 488 PRINTS PR01050 Pyruvate kinase family signature 247 271 4.8E-56 T 17-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BJD13_22415 5fed39ab0714928943db0507fc9d5c14 488 PRINTS PR01050 Pyruvate kinase family signature 190 204 4.8E-56 T 17-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BJD13_22415 5fed39ab0714928943db0507fc9d5c14 488 PRINTS PR01050 Pyruvate kinase family signature 297 315 4.8E-56 T 17-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BJD13_22415 5fed39ab0714928943db0507fc9d5c14 488 PRINTS PR01050 Pyruvate kinase family signature 220 246 4.8E-56 T 17-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BJD13_22415 5fed39ab0714928943db0507fc9d5c14 488 PRINTS PR01050 Pyruvate kinase family signature 316 332 4.8E-56 T 17-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BJD13_22415 5fed39ab0714928943db0507fc9d5c14 488 Gene3D G3DSA:2.40.33.10 74 172 9.5E-158 T 17-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BJD13_22415 5fed39ab0714928943db0507fc9d5c14 488 SUPERFAMILY SSF50800 74 171 2.27E-24 T 17-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily BJD13_22415 5fed39ab0714928943db0507fc9d5c14 488 Gene3D G3DSA:3.40.1380.20 339 472 9.5E-158 T 17-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BJD13_22415 5fed39ab0714928943db0507fc9d5c14 488 SUPERFAMILY SSF51621 4 342 5.58E-88 T 17-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 BJD13_22415 5fed39ab0714928943db0507fc9d5c14 488 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 17-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BJD13_22415 5fed39ab0714928943db0507fc9d5c14 488 Pfam PF00224 Pyruvate kinase, barrel domain 6 342 2.3E-122 T 17-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BJD13_03665 8977bd87d8c509e125fc87cd20f0c8cb 158 Pfam PF03168 Late embryogenesis abundant protein 50 141 2.2E-6 T 17-10-2018 IPR004864 Late embryogenesis abundant protein, LEA_2 subgroup BJD13_03665 8977bd87d8c509e125fc87cd20f0c8cb 158 SUPERFAMILY SSF117070 16 128 1.57E-6 T 17-10-2018 BJD13_03270 8e1a3d907d1b17cf09939da524bfa7d7 106 SUPERFAMILY SSF52833 2 102 2.93E-30 T 17-10-2018 IPR036249 Thioredoxin-like superfamily BJD13_03270 8e1a3d907d1b17cf09939da524bfa7d7 106 Pfam PF00462 Glutaredoxin 16 81 9.2E-17 T 17-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 BJD13_03270 8e1a3d907d1b17cf09939da524bfa7d7 106 Gene3D G3DSA:3.40.30.10 6 102 1.6E-30 T 17-10-2018 BJD13_03270 8e1a3d907d1b17cf09939da524bfa7d7 106 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 101 2.7E-41 T 17-10-2018 IPR004480 Monothiol glutaredoxin-related BJD13_03270 8e1a3d907d1b17cf09939da524bfa7d7 106 PIRSF PIRSF005894 1 106 2.1E-46 T 17-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 BJD13_15765 247c66bff627db267be0ac43c841cb02 538 SUPERFAMILY SSF51645 25 537 1.06E-182 T 17-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 BJD13_15765 247c66bff627db267be0ac43c841cb02 538 Gene3D G3DSA:3.20.20.360 16 418 3.2E-178 T 17-10-2018 BJD13_15765 247c66bff627db267be0ac43c841cb02 538 Pfam PF01274 Malate synthase 26 537 2.1E-195 T 17-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 BJD13_15765 247c66bff627db267be0ac43c841cb02 538 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 31 537 1.7E-217 T 17-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 BJD13_15765 247c66bff627db267be0ac43c841cb02 538 PIRSF PIRSF001363 11 538 2.4E-231 T 17-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 BJD13_15765 247c66bff627db267be0ac43c841cb02 538 Gene3D G3DSA:1.20.1220.12 419 537 7.0E-38 T 17-10-2018 BJD13_19895 8e467e1065a18feeecb570290406db2f 830 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 674 54.345 T 17-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 BJD13_19895 8e467e1065a18feeecb570290406db2f 830 Gene3D G3DSA:2.70.20.10 188 472 2.8E-168 T 17-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 BJD13_19895 8e467e1065a18feeecb570290406db2f 830 SMART SM00436 108 196 8.1E-47 T 17-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 BJD13_19895 8e467e1065a18feeecb570290406db2f 830 Gene3D G3DSA:3.40.50.140 1 138 6.6E-49 T 17-10-2018 BJD13_19895 8e467e1065a18feeecb570290406db2f 830 Gene3D G3DSA:1.10.290.10 260 396 2.8E-168 T 17-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 BJD13_19895 8e467e1065a18feeecb570290406db2f 830 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 618 8.9E-225 T 17-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 BJD13_19895 8e467e1065a18feeecb570290406db2f 830 SUPERFAMILY SSF56712 3 598 5.23E-187 T 17-10-2018 IPR023405 DNA topoisomerase, type IA, core domain BJD13_19895 8e467e1065a18feeecb570290406db2f 830 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 488 502 6.8E-37 T 17-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BJD13_19895 8e467e1065a18feeecb570290406db2f 830 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 303 312 6.8E-37 T 17-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BJD13_19895 8e467e1065a18feeecb570290406db2f 830 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 166 184 6.8E-37 T 17-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BJD13_19895 8e467e1065a18feeecb570290406db2f 830 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 77 90 6.8E-37 T 17-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BJD13_19895 8e467e1065a18feeecb570290406db2f 830 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 381 397 6.8E-37 T 17-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BJD13_19895 8e467e1065a18feeecb570290406db2f 830 SMART SM00493 3 103 2.2E-32 T 17-10-2018 IPR006171 TOPRIM domain BJD13_19895 8e467e1065a18feeecb570290406db2f 830 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 289 312 - T 17-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 BJD13_19895 8e467e1065a18feeecb570290406db2f 830 SMART SM00437 252 525 9.9E-114 T 17-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 BJD13_19895 8e467e1065a18feeecb570290406db2f 830 Pfam PF01131 DNA topoisomerase 135 562 9.2E-130 T 17-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BJD13_19895 8e467e1065a18feeecb570290406db2f 830 Pfam PF13368 Topoisomerase C-terminal repeat 714 759 5.7E-13 T 17-10-2018 IPR025589 Topoisomerase C-terminal repeat BJD13_19895 8e467e1065a18feeecb570290406db2f 830 Pfam PF13368 Topoisomerase C-terminal repeat 657 703 5.6E-12 T 17-10-2018 IPR025589 Topoisomerase C-terminal repeat BJD13_19895 8e467e1065a18feeecb570290406db2f 830 Pfam PF13368 Topoisomerase C-terminal repeat 594 653 4.5E-14 T 17-10-2018 IPR025589 Topoisomerase C-terminal repeat BJD13_19895 8e467e1065a18feeecb570290406db2f 830 Gene3D G3DSA:1.10.460.10 139 565 2.8E-168 T 17-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 BJD13_19895 8e467e1065a18feeecb570290406db2f 830 Pfam PF01751 Toprim domain 5 117 3.4E-26 T 17-10-2018 IPR006171 TOPRIM domain BJD13_21840 f48bba04870fae79cf77fb17a1f97f1c 218 Gene3D G3DSA:3.40.50.150 3 210 5.2E-50 T 17-10-2018 BJD13_21840 f48bba04870fae79cf77fb17a1f97f1c 218 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 9 174 3.2E-32 T 17-10-2018 BJD13_21840 f48bba04870fae79cf77fb17a1f97f1c 218 SUPERFAMILY SSF53335 3 180 2.92E-43 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_17620 d90b8448e30509e5895c4c6980413bbc 888 Pfam PF01553 Acyltransferase 344 483 1.4E-23 T 17-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 BJD13_17620 d90b8448e30509e5895c4c6980413bbc 888 PIRSF PIRSF000437 73 886 0.0 T 17-10-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 BJD13_17620 d90b8448e30509e5895c4c6980413bbc 888 SUPERFAMILY SSF69593 324 543 9.42E-29 T 17-10-2018 BJD13_17620 d90b8448e30509e5895c4c6980413bbc 888 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 69 871 0.0 T 17-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 BJD13_17620 d90b8448e30509e5895c4c6980413bbc 888 PIRSF PIRSF500064 48 887 0.0 T 17-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 BJD13_17620 d90b8448e30509e5895c4c6980413bbc 888 SMART SM00563 359 486 6.4E-29 T 17-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 BJD13_17620 d90b8448e30509e5895c4c6980413bbc 888 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 64 875 29.565 T 17-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 BJD13_22315 e12ed38b11b4b1db808f9c2d2e95ee75 904 Gene3D G3DSA:2.40.170.20 401 904 5.1E-45 T 17-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BJD13_22315 e12ed38b11b4b1db808f9c2d2e95ee75 904 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 165 7.0E-14 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_22315 e12ed38b11b4b1db808f9c2d2e95ee75 904 Gene3D G3DSA:2.170.130.10 25 170 1.8E-12 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_22315 e12ed38b11b4b1db808f9c2d2e95ee75 904 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 34 903 6.8E-193 T 17-10-2018 IPR010104 Bacterial TonB-dependent receptor BJD13_22315 e12ed38b11b4b1db808f9c2d2e95ee75 904 Pfam PF00593 TonB dependent receptor 403 903 6.8E-35 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_22315 e12ed38b11b4b1db808f9c2d2e95ee75 904 SUPERFAMILY SSF56935 26 904 2.38E-72 T 17-10-2018 BJD13_05325 d1bec888083af50383c47ac77533ade7 596 SUPERFAMILY SSF46977 454 596 9.42E-49 T 17-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BJD13_05325 d1bec888083af50383c47ac77533ade7 596 Gene3D G3DSA:3.50.50.60 12 419 3.6E-167 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_05325 d1bec888083af50383c47ac77533ade7 596 PIRSF PIRSF000171 1 586 5.7E-37 T 17-10-2018 BJD13_05325 d1bec888083af50383c47ac77533ade7 596 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 12 596 1.0E-242 T 17-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BJD13_05325 d1bec888083af50383c47ac77533ade7 596 Gene3D G3DSA:1.20.58.100 437 548 2.8E-37 T 17-10-2018 BJD13_05325 d1bec888083af50383c47ac77533ade7 596 Pfam PF00890 FAD binding domain 12 408 6.0E-122 T 17-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 BJD13_05325 d1bec888083af50383c47ac77533ade7 596 SUPERFAMILY SSF56425 240 358 4.34E-43 T 17-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 BJD13_05325 d1bec888083af50383c47ac77533ade7 596 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 46 55 - T 17-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BJD13_05325 d1bec888083af50383c47ac77533ade7 596 Gene3D G3DSA:3.90.700.10 250 353 3.6E-167 T 17-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 BJD13_05325 d1bec888083af50383c47ac77533ade7 596 Gene3D G3DSA:4.10.80.40 549 596 1.2E-10 T 17-10-2018 BJD13_05325 d1bec888083af50383c47ac77533ade7 596 Pfam PF02910 Fumarate reductase flavoprotein C-term 463 596 9.2E-43 T 17-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BJD13_05325 d1bec888083af50383c47ac77533ade7 596 SUPERFAMILY SSF51905 4 440 1.02E-75 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_05325 d1bec888083af50383c47ac77533ade7 596 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 9 596 3.6E-289 T 17-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 BJD13_02045 dbf2e1668ad57bf34b9f35cf4f41365b 190 SUPERFAMILY SSF48150 4 167 1.26E-52 T 17-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 BJD13_02045 dbf2e1668ad57bf34b9f35cf4f41365b 190 Gene3D G3DSA:1.10.340.30 3 167 2.3E-44 T 17-10-2018 BJD13_02045 dbf2e1668ad57bf34b9f35cf4f41365b 190 Pfam PF03352 Methyladenine glycosylase 11 119 1.2E-40 T 17-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 BJD13_08825 0c889243a1c49fc5f04c34b5430a5069 376 Gene3D G3DSA:3.20.20.330 19 372 1.1E-127 T 17-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 BJD13_08825 0c889243a1c49fc5f04c34b5430a5069 376 Pfam PF02574 Homocysteine S-methyltransferase 34 360 4.3E-81 T 17-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 BJD13_08825 0c889243a1c49fc5f04c34b5430a5069 376 PIRSF PIRSF037505 91 166 1.9E-4 T 17-10-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 BJD13_08825 0c889243a1c49fc5f04c34b5430a5069 376 PIRSF PIRSF037505 318 374 0.0015 T 17-10-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 BJD13_08825 0c889243a1c49fc5f04c34b5430a5069 376 SUPERFAMILY SSF82282 25 372 1.1E-99 T 17-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 BJD13_23565 7a91e7dacc720e496f0888734f2aac1e 244 Gene3D G3DSA:3.40.1280.10 74 244 7.4E-59 T 17-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BJD13_23565 7a91e7dacc720e496f0888734f2aac1e 244 PIRSF PIRSF015601 5 244 1.1E-58 T 17-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 BJD13_23565 7a91e7dacc720e496f0888734f2aac1e 244 Gene3D G3DSA:2.40.240.20 1 69 7.1E-18 T 17-10-2018 BJD13_23565 7a91e7dacc720e496f0888734f2aac1e 244 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 17 244 1.0E-60 T 17-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 BJD13_23565 7a91e7dacc720e496f0888734f2aac1e 244 SUPERFAMILY SSF88697 3 68 3.48E-14 T 17-10-2018 IPR015947 PUA-like superfamily BJD13_23565 7a91e7dacc720e496f0888734f2aac1e 244 SUPERFAMILY SSF75217 74 244 4.1E-50 T 17-10-2018 IPR029028 Alpha/beta knot methyltransferases BJD13_23565 7a91e7dacc720e496f0888734f2aac1e 244 Pfam PF04452 RNA methyltransferase 18 238 3.9E-72 T 17-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 BJD13_02145 8c52e92ca81013aad3fbf730574ef89e 316 Gene3D G3DSA:3.30.390.50 223 316 4.5E-25 T 17-10-2018 BJD13_02145 8c52e92ca81013aad3fbf730574ef89e 316 Gene3D G3DSA:3.30.465.10 1 222 1.0E-87 T 17-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 BJD13_02145 8c52e92ca81013aad3fbf730574ef89e 316 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 227 276 1.4E-6 T 17-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal BJD13_02145 8c52e92ca81013aad3fbf730574ef89e 316 SUPERFAMILY SSF56176 1 220 3.22E-59 T 17-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 BJD13_02145 8c52e92ca81013aad3fbf730574ef89e 316 SUPERFAMILY SSF55447 224 313 4.32E-20 T 17-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily BJD13_02145 8c52e92ca81013aad3fbf730574ef89e 316 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 3 221 6.0E-52 T 17-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 BJD13_02145 8c52e92ca81013aad3fbf730574ef89e 316 SMART SM01092 226 314 2.0E-19 T 17-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal BJD13_16525 eb943911f1f51f193c7db73d26818aae 272 Pfam PF13709 Domain of unknown function (DUF4159) 73 270 2.6E-53 T 17-10-2018 IPR025297 Domain of unknown function DUF4159 BJD13_16525 eb943911f1f51f193c7db73d26818aae 272 Gene3D G3DSA:3.40.50.12140 68 272 7.6E-45 T 17-10-2018 BJD13_09415 ce1d7449ab630f564b72bf0abea2ec7f 869 Pfam PF01966 HD domain 451 570 2.2E-13 T 17-10-2018 IPR006674 HD domain BJD13_09415 ce1d7449ab630f564b72bf0abea2ec7f 869 SMART SM00471 446 593 8.9E-9 T 17-10-2018 IPR003607 HD/PDEase domain BJD13_09415 ce1d7449ab630f564b72bf0abea2ec7f 869 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 869 261.771 T 17-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 BJD13_09415 ce1d7449ab630f564b72bf0abea2ec7f 869 SUPERFAMILY SSF81301 22 174 1.05E-16 T 17-10-2018 BJD13_09415 ce1d7449ab630f564b72bf0abea2ec7f 869 Gene3D G3DSA:3.30.70.260 795 867 1.2E-6 T 17-10-2018 BJD13_09415 ce1d7449ab630f564b72bf0abea2ec7f 869 SUPERFAMILY SSF55021 688 757 2.87E-5 T 17-10-2018 BJD13_09415 ce1d7449ab630f564b72bf0abea2ec7f 869 SUPERFAMILY SSF109604 418 541 1.1E-13 T 17-10-2018 BJD13_09415 ce1d7449ab630f564b72bf0abea2ec7f 869 Pfam PF08335 GlnD PII-uridylyltransferase 178 316 2.4E-31 T 17-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 BJD13_09415 ce1d7449ab630f564b72bf0abea2ec7f 869 Gene3D G3DSA:1.10.3210.10 441 561 7.6E-7 T 17-10-2018 BJD13_09415 ce1d7449ab630f564b72bf0abea2ec7f 869 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 34 866 2.8E-229 T 17-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 BJD13_09415 ce1d7449ab630f564b72bf0abea2ec7f 869 SUPERFAMILY SSF55021 795 863 9.16E-11 T 17-10-2018 BJD13_09415 ce1d7449ab630f564b72bf0abea2ec7f 869 SUPERFAMILY SSF81593 198 317 3.37E-9 T 17-10-2018 BJD13_09415 ce1d7449ab630f564b72bf0abea2ec7f 869 Pfam PF01909 Nucleotidyltransferase domain 73 120 1.2E-4 T 17-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 BJD13_09415 ce1d7449ab630f564b72bf0abea2ec7f 869 PIRSF PIRSF006288 7 869 1.6E-289 T 17-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 BJD13_20090 6844ca59c372b356c77ac9ab3de6688b 145 Gene3D G3DSA:1.10.260.40 1 63 2.0E-7 T 17-10-2018 BJD13_20090 6844ca59c372b356c77ac9ab3de6688b 145 SUPERFAMILY SSF47413 1 52 5.63E-9 T 17-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BJD13_15675 d8e4bb1aa779fe7c45dbb997870e8035 572 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 277 534 3.6E-8 T 17-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase BJD13_15675 d8e4bb1aa779fe7c45dbb997870e8035 572 SUPERFAMILY SSF56219 271 572 8.28E-36 T 17-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BJD13_15675 d8e4bb1aa779fe7c45dbb997870e8035 572 Gene3D G3DSA:3.60.10.10 273 570 6.3E-35 T 17-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BJD13_22045 0106ed8b9659c080735bb6ea5ff4a0cd 149 ProDom PD003655 COPPER ELECTRON AZURIN METAL-BINDING PERIPLASMIC PRECURSOR SIGNAL SEQUENCING DIRECT MEMBRANE 26 149 9.0E-69 T 17-10-2018 BJD13_22045 0106ed8b9659c080735bb6ea5ff4a0cd 149 TIGRFAM TIGR02695 azurin: azurin 24 148 4.2E-59 T 17-10-2018 IPR014068 Azurin BJD13_22045 0106ed8b9659c080735bb6ea5ff4a0cd 149 Gene3D G3DSA:2.60.40.420 22 148 3.3E-43 T 17-10-2018 IPR008972 Cupredoxin BJD13_22045 0106ed8b9659c080735bb6ea5ff4a0cd 149 ProSitePatterns PS00196 Type-1 copper (blue) proteins signature. 126 142 - T 17-10-2018 IPR028871 Blue (type 1) copper protein, binding site BJD13_22045 0106ed8b9659c080735bb6ea5ff4a0cd 149 SUPERFAMILY SSF49503 23 147 1.66E-42 T 17-10-2018 IPR008972 Cupredoxin BJD13_22045 0106ed8b9659c080735bb6ea5ff4a0cd 149 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 23 147 3.3E-20 T 17-10-2018 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 BJD13_05005 fa1ec8748a0b31a7dffa3b77a203fc30 812 Hamap MF_01871 UPF0753 protein . 16 788 22.158 T 17-10-2018 IPR018752 Uncharacterised protein family UPF0753 BJD13_05005 fa1ec8748a0b31a7dffa3b77a203fc30 812 Pfam PF10070 Uncharacterized protein conserved in bacteria (DUF2309) 22 773 1.5E-247 T 17-10-2018 IPR018752 Uncharacterised protein family UPF0753 BJD13_14325 49580ac93798394f64321a0cf3692eb3 431 SUPERFAMILY SSF52440 2 103 2.01E-35 T 17-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BJD13_14325 49580ac93798394f64321a0cf3692eb3 431 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 2 102 1.7E-33 T 17-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BJD13_14325 49580ac93798394f64321a0cf3692eb3 431 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 421 1.1E-24 T 17-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BJD13_14325 49580ac93798394f64321a0cf3692eb3 431 SUPERFAMILY SSF51246 329 424 5.81E-28 T 17-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 BJD13_14325 49580ac93798394f64321a0cf3692eb3 431 SMART SM01209 103 296 2.5E-139 T 17-10-2018 BJD13_14325 49580ac93798394f64321a0cf3692eb3 431 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 17-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BJD13_14325 49580ac93798394f64321a0cf3692eb3 431 Gene3D G3DSA:3.30.1490.20 121 190 2.0E-27 T 17-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BJD13_14325 49580ac93798394f64321a0cf3692eb3 431 Gene3D G3DSA:3.90.600.10 331 431 8.8E-29 T 17-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BJD13_14325 49580ac93798394f64321a0cf3692eb3 431 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 5.7E-81 T 17-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BJD13_14325 49580ac93798394f64321a0cf3692eb3 431 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 3.4E-171 T 17-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BJD13_14325 49580ac93798394f64321a0cf3692eb3 431 SMART SM01210 330 423 3.4E-46 T 17-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BJD13_14325 49580ac93798394f64321a0cf3692eb3 431 SUPERFAMILY SSF56059 104 322 1.36E-66 T 17-10-2018 BJD13_14325 49580ac93798394f64321a0cf3692eb3 431 Gene3D G3DSA:3.30.470.20 191 329 9.5E-58 T 17-10-2018 BJD13_14325 49580ac93798394f64321a0cf3692eb3 431 Gene3D G3DSA:3.40.50.20 2 95 2.3E-37 T 17-10-2018 BJD13_14325 49580ac93798394f64321a0cf3692eb3 431 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 42.362 T 17-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BJD13_13050 110e9c26bc822bdae042a4bea295e51e 369 SUPERFAMILY SSF50129 1 187 3.04E-72 T 17-10-2018 IPR011032 GroES-like superfamily BJD13_13050 110e9c26bc822bdae042a4bea295e51e 369 SUPERFAMILY SSF50129 318 369 2.82E-12 T 17-10-2018 IPR011032 GroES-like superfamily BJD13_13050 110e9c26bc822bdae042a4bea295e51e 369 Gene3D G3DSA:3.90.180.10 6 364 1.1E-151 T 17-10-2018 BJD13_13050 110e9c26bc822bdae042a4bea295e51e 369 SUPERFAMILY SSF51735 160 333 2.82E-47 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_13050 110e9c26bc822bdae042a4bea295e51e 369 Gene3D G3DSA:3.40.50.720 174 312 1.1E-151 T 17-10-2018 BJD13_13050 110e9c26bc822bdae042a4bea295e51e 369 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2 369 7.5E-225 T 17-10-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 BJD13_13050 110e9c26bc822bdae042a4bea295e51e 369 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 151 9.5E-26 T 17-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 BJD13_13050 110e9c26bc822bdae042a4bea295e51e 369 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 17-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 BJD13_13050 110e9c26bc822bdae042a4bea295e51e 369 Pfam PF00107 Zinc-binding dehydrogenase 197 329 1.2E-23 T 17-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 BJD13_13050 110e9c26bc822bdae042a4bea295e51e 369 SMART SM00829 10 367 0.0028 T 17-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 BJD13_08015 b7edfbef0622d4f2ff82ed2cb1f8d7de 276 SUPERFAMILY SSF51569 2 270 7.14E-107 T 17-10-2018 BJD13_08015 b7edfbef0622d4f2ff82ed2cb1f8d7de 276 Gene3D G3DSA:3.20.20.70 2 273 4.0E-103 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD13_08015 b7edfbef0622d4f2ff82ed2cb1f8d7de 276 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 13 269 1.7E-129 T 17-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 BJD13_08015 b7edfbef0622d4f2ff82ed2cb1f8d7de 276 Pfam PF00793 DAHP synthetase I family 6 266 2.1E-67 T 17-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 BJD13_08015 b7edfbef0622d4f2ff82ed2cb1f8d7de 276 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 8 270 53.318 T 17-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 BJD13_19515 8653166294cc4bb6d7bb3436d6ed4671 319 PRINTS PR01166 Cytochrome c oxidase subunit II signature 182 203 1.9E-42 T 17-10-2018 BJD13_19515 8653166294cc4bb6d7bb3436d6ed4671 319 PRINTS PR01166 Cytochrome c oxidase subunit II signature 244 261 1.9E-42 T 17-10-2018 BJD13_19515 8653166294cc4bb6d7bb3436d6ed4671 319 PRINTS PR01166 Cytochrome c oxidase subunit II signature 206 226 1.9E-42 T 17-10-2018 BJD13_19515 8653166294cc4bb6d7bb3436d6ed4671 319 PRINTS PR01166 Cytochrome c oxidase subunit II signature 108 128 1.9E-42 T 17-10-2018 BJD13_19515 8653166294cc4bb6d7bb3436d6ed4671 319 PRINTS PR01166 Cytochrome c oxidase subunit II signature 96 108 1.9E-42 T 17-10-2018 BJD13_19515 8653166294cc4bb6d7bb3436d6ed4671 319 PRINTS PR01166 Cytochrome c oxidase subunit II signature 226 243 1.9E-42 T 17-10-2018 BJD13_19515 8653166294cc4bb6d7bb3436d6ed4671 319 PRINTS PR01166 Cytochrome c oxidase subunit II signature 130 149 1.9E-42 T 17-10-2018 BJD13_19515 8653166294cc4bb6d7bb3436d6ed4671 319 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 51 271 1.5E-59 T 17-10-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_19515 8653166294cc4bb6d7bb3436d6ed4671 319 SUPERFAMILY SSF81464 36 128 4.58E-23 T 17-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_19515 8653166294cc4bb6d7bb3436d6ed4671 319 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 207 255 - T 17-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_19515 8653166294cc4bb6d7bb3436d6ed4671 319 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 36 118 8.6E-13 T 17-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_19515 8653166294cc4bb6d7bb3436d6ed4671 319 Gene3D G3DSA:1.10.287.90 35 129 2.6E-24 T 17-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_19515 8653166294cc4bb6d7bb3436d6ed4671 319 SUPERFAMILY SSF49503 131 275 4.87E-53 T 17-10-2018 IPR008972 Cupredoxin BJD13_19515 8653166294cc4bb6d7bb3436d6ed4671 319 Gene3D G3DSA:2.60.40.420 131 275 7.2E-55 T 17-10-2018 IPR008972 Cupredoxin BJD13_19515 8653166294cc4bb6d7bb3436d6ed4671 319 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 134 261 1.1E-39 T 17-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_23310 1e4a1eda0e9fb1fcd91cf46217125b0d 92 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 26 90 6.4E-15 T 17-10-2018 IPR008792 Coenzyme PQQ synthesis D BJD13_23310 1e4a1eda0e9fb1fcd91cf46217125b0d 92 Gene3D G3DSA:1.10.10.1150 1 92 3.1E-37 T 17-10-2018 BJD13_23310 1e4a1eda0e9fb1fcd91cf46217125b0d 92 TIGRFAM TIGR03859 PQQ_PqqD: coenzyme PQQ biosynthesis protein PqqD 10 90 2.7E-31 T 17-10-2018 IPR022479 Coenzyme PQQ synthesis D, bacteria GO:0018189|GO:0048038 BJD13_23310 1e4a1eda0e9fb1fcd91cf46217125b0d 92 Hamap MF_00655 Coenzyme PQQ synthesis protein D [pqqD]. 4 92 22.398 T 17-10-2018 IPR022479 Coenzyme PQQ synthesis D, bacteria GO:0018189|GO:0048038 BJD13_12705 1a3d33327fc01ee5ef1b9976640a607b 310 Gene3D G3DSA:3.40.50.300 7 287 1.9E-57 T 17-10-2018 BJD13_12705 1a3d33327fc01ee5ef1b9976640a607b 310 Pfam PF00685 Sulfotransferase domain 27 278 1.6E-41 T 17-10-2018 IPR000863 Sulfotransferase domain GO:0008146 BJD13_12705 1a3d33327fc01ee5ef1b9976640a607b 310 SUPERFAMILY SSF52540 19 278 8.35E-57 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_07930 bc0485e0adcda592817f6a3e7b9f9973 327 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 10 302 1.2E-87 T 17-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 BJD13_07930 bc0485e0adcda592817f6a3e7b9f9973 327 SUPERFAMILY SSF52540 10 154 5.0E-21 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_07930 bc0485e0adcda592817f6a3e7b9f9973 327 Pfam PF01715 IPP transferase 43 292 2.0E-78 T 17-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 BJD13_07930 bc0485e0adcda592817f6a3e7b9f9973 327 Gene3D G3DSA:1.10.20.140 116 188 4.4E-93 T 17-10-2018 BJD13_07930 bc0485e0adcda592817f6a3e7b9f9973 327 Gene3D G3DSA:3.40.50.300 13 299 4.4E-93 T 17-10-2018 BJD13_07930 bc0485e0adcda592817f6a3e7b9f9973 327 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 9 312 28.794 T 17-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 BJD13_21025 dc05e0026a9152903ffb65bb1cb97def 674 Gene3D G3DSA:1.10.1370.40 14 670 3.2E-253 T 17-10-2018 BJD13_21025 dc05e0026a9152903ffb65bb1cb97def 674 SUPERFAMILY SSF55486 1 671 1.95E-191 T 17-10-2018 BJD13_21025 dc05e0026a9152903ffb65bb1cb97def 674 Gene3D G3DSA:1.10.1370.10 139 604 3.2E-253 T 17-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 BJD13_21025 dc05e0026a9152903ffb65bb1cb97def 674 Pfam PF01432 Peptidase family M3 224 671 1.6E-143 T 17-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 BJD13_11665 7b9b074a8940df75f3fb42241da40c82 343 Pfam PF12857 TOBE-like domain 282 336 5.3E-9 T 17-10-2018 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 BJD13_11665 7b9b074a8940df75f3fb42241da40c82 343 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD13_11665 7b9b074a8940df75f3fb42241da40c82 343 SUPERFAMILY SSF50331 240 339 2.78E-10 T 17-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal BJD13_11665 7b9b074a8940df75f3fb42241da40c82 343 SUPERFAMILY SSF52540 3 243 1.91E-84 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_11665 7b9b074a8940df75f3fb42241da40c82 343 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 242 1.6E-113 T 17-10-2018 IPR005666 Sulphate transport system permease protein 1 GO:0008272|GO:0015419|GO:0016020|GO:0043190 KEGG: 00920+3.6.3.25 BJD13_11665 7b9b074a8940df75f3fb42241da40c82 343 SMART SM00382 27 214 2.9E-18 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_11665 7b9b074a8940df75f3fb42241da40c82 343 Gene3D G3DSA:3.40.50.300 3 259 1.3E-77 T 17-10-2018 BJD13_11665 7b9b074a8940df75f3fb42241da40c82 343 Pfam PF00005 ABC transporter 18 164 4.1E-34 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD13_08300 b3ed9e1ec7d1f456bb31d73b0286ea0c 703 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 509 664 2.8E-51 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD13_08300 b3ed9e1ec7d1f456bb31d73b0286ea0c 703 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 185 7.2E-21 T 17-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain BJD13_08300 b3ed9e1ec7d1f456bb31d73b0286ea0c 703 SMART SM00304 216 268 2.8E-4 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_08300 b3ed9e1ec7d1f456bb31d73b0286ea0c 703 SMART SM00304 397 449 38.0 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_08300 b3ed9e1ec7d1f456bb31d73b0286ea0c 703 SMART SM00304 307 358 5.2 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_08300 b3ed9e1ec7d1f456bb31d73b0286ea0c 703 Gene3D G3DSA:1.20.120.1530 207 354 1.7E-36 T 17-10-2018 BJD13_08300 b3ed9e1ec7d1f456bb31d73b0286ea0c 703 SMART SM00283 450 697 1.6E-88 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD13_08300 b3ed9e1ec7d1f456bb31d73b0286ea0c 703 SUPERFAMILY SSF58104 417 698 1.83E-69 T 17-10-2018 BJD13_08300 b3ed9e1ec7d1f456bb31d73b0286ea0c 703 Gene3D G3DSA:1.10.287.950 398 699 1.9E-81 T 17-10-2018 BJD13_08300 b3ed9e1ec7d1f456bb31d73b0286ea0c 703 SUPERFAMILY SSF158472 216 267 6.02E-8 T 17-10-2018 BJD13_11480 e527490e6b1999d3e5c854ed84608096 823 SUPERFAMILY SSF52540 315 603 7.22E-51 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_11480 e527490e6b1999d3e5c854ed84608096 823 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 353 489 5.8E-18 T 17-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BJD13_11480 e527490e6b1999d3e5c854ed84608096 823 SUPERFAMILY SSF54211 610 785 3.75E-57 T 17-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BJD13_11480 e527490e6b1999d3e5c854ed84608096 823 Gene3D G3DSA:1.20.58.1480 122 246 5.7E-43 T 17-10-2018 BJD13_11480 e527490e6b1999d3e5c854ed84608096 823 Hamap MF_01973 Lon protease [lon]. 11 787 72.477 T 17-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 BJD13_11480 e527490e6b1999d3e5c854ed84608096 823 SUPERFAMILY SSF88697 10 202 3.73E-49 T 17-10-2018 IPR015947 PUA-like superfamily BJD13_11480 e527490e6b1999d3e5c854ed84608096 823 Gene3D G3DSA:2.30.130.40 1 117 5.5E-34 T 17-10-2018 BJD13_11480 e527490e6b1999d3e5c854ed84608096 823 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 585 787 2.8E-94 T 17-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 BJD13_11480 e527490e6b1999d3e5c854ed84608096 823 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 741 759 2.1E-53 T 17-10-2018 BJD13_11480 e527490e6b1999d3e5c854ed84608096 823 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 357 376 2.1E-53 T 17-10-2018 BJD13_11480 e527490e6b1999d3e5c854ed84608096 823 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 610 626 2.1E-53 T 17-10-2018 BJD13_11480 e527490e6b1999d3e5c854ed84608096 823 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 688 707 2.1E-53 T 17-10-2018 BJD13_11480 e527490e6b1999d3e5c854ed84608096 823 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 718 737 2.1E-53 T 17-10-2018 BJD13_11480 e527490e6b1999d3e5c854ed84608096 823 SMART SM00464 10 203 1.2E-73 T 17-10-2018 IPR003111 Lon, substrate-binding domain BJD13_11480 e527490e6b1999d3e5c854ed84608096 823 Gene3D G3DSA:3.40.50.300 315 491 4.4E-63 T 17-10-2018 BJD13_11480 e527490e6b1999d3e5c854ed84608096 823 PIRSF PIRSF001174 1 789 0.0 T 17-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 BJD13_11480 e527490e6b1999d3e5c854ed84608096 823 TIGRFAM TIGR00763 lon: endopeptidase La 12 786 0.0 T 17-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 BJD13_11480 e527490e6b1999d3e5c854ed84608096 823 SMART SM00382 349 495 4.0E-12 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_11480 e527490e6b1999d3e5c854ed84608096 823 Gene3D G3DSA:1.10.8.60 492 599 2.0E-30 T 17-10-2018 BJD13_11480 e527490e6b1999d3e5c854ed84608096 823 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 691 699 - T 17-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 BJD13_11480 e527490e6b1999d3e5c854ed84608096 823 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 11 200 4.0E-41 T 17-10-2018 IPR003111 Lon, substrate-binding domain BJD13_11480 e527490e6b1999d3e5c854ed84608096 823 Gene3D G3DSA:3.30.230.10 600 787 1.7E-79 T 17-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BJD13_23155 557cc88b7c0ddb5e798ff22c9e984812 152 SUPERFAMILY SSF54637 14 144 2.79E-38 T 17-10-2018 IPR029069 HotDog domain superfamily BJD13_23155 557cc88b7c0ddb5e798ff22c9e984812 152 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 16 138 2.2E-50 T 17-10-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 BJD13_23155 557cc88b7c0ddb5e798ff22c9e984812 152 ProSitePatterns PS01328 4-hydroxybenzoyl-CoA thioesterase family active site. 21 38 - T 17-10-2018 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site GO:0016787 BJD13_23155 557cc88b7c0ddb5e798ff22c9e984812 152 Gene3D G3DSA:3.10.129.10 9 149 2.3E-36 T 17-10-2018 BJD13_23155 557cc88b7c0ddb5e798ff22c9e984812 152 Pfam PF03061 Thioesterase superfamily 30 114 2.9E-18 T 17-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 BJD13_23155 557cc88b7c0ddb5e798ff22c9e984812 152 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 19 122 3.1E-31 T 17-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 BJD13_23155 557cc88b7c0ddb5e798ff22c9e984812 152 PIRSF PIRSF003230 7 149 2.2E-41 T 17-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 BJD13_13715 c66d0e2798082c2315406687a1d7e3c9 458 Pfam PF00324 Amino acid permease 18 454 7.7E-115 T 17-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 BJD13_13715 c66d0e2798082c2315406687a1d7e3c9 458 Gene3D G3DSA:1.20.1740.10 9 458 1.3E-62 T 17-10-2018 BJD13_13715 c66d0e2798082c2315406687a1d7e3c9 458 ProSitePatterns PS00218 Amino acid permeases signature. 43 73 - T 17-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 BJD13_13715 c66d0e2798082c2315406687a1d7e3c9 458 PIRSF PIRSF006060 1 455 5.5E-72 T 17-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BJD13_05360 6e45a837d598736441561eb015b94627 354 SUPERFAMILY SSF51735 6 345 1.46E-27 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_05360 6e45a837d598736441561eb015b94627 354 Gene3D G3DSA:3.40.50.720 4 354 3.7E-101 T 17-10-2018 BJD13_05360 6e45a837d598736441561eb015b94627 354 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 210 2.5E-9 T 17-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 BJD13_23965 19cbef004b60f09ed591015e4dee6abb 357 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 176 189 - T 17-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BJD13_23965 19cbef004b60f09ed591015e4dee6abb 357 SUPERFAMILY SSF52540 22 335 5.2E-47 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_23965 19cbef004b60f09ed591015e4dee6abb 357 TIGRFAM TIGR02788 VirB11: P-type DNA transfer ATPase VirB11 30 344 1.6E-112 T 17-10-2018 IPR014155 Type IV secretion system protein VirB11 GO:0043684|GO:0044097 BJD13_23965 19cbef004b60f09ed591015e4dee6abb 357 Gene3D G3DSA:3.40.50.300 127 356 4.7E-74 T 17-10-2018 BJD13_23965 19cbef004b60f09ed591015e4dee6abb 357 Gene3D G3DSA:3.30.450.90 19 126 1.3E-38 T 17-10-2018 BJD13_23965 19cbef004b60f09ed591015e4dee6abb 357 Pfam PF00437 Type II/IV secretion system protein 26 328 7.2E-57 T 17-10-2018 IPR001482 Type II/IV secretion system protein BJD13_16130 e36669fc2adea04db265ad0882cdcead 1235 SUPERFAMILY SSF52922 285 413 5.38E-9 T 17-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BJD13_16130 e36669fc2adea04db265ad0882cdcead 1235 Gene3D G3DSA:3.40.920.10 741 944 5.4E-19 T 17-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 BJD13_16130 e36669fc2adea04db265ad0882cdcead 1235 SUPERFAMILY SSF52518 67 214 5.24E-12 T 17-10-2018 IPR029061 Thiamin diphosphate-binding fold BJD13_16130 e36669fc2adea04db265ad0882cdcead 1235 SUPERFAMILY SSF53323 744 958 3.14E-29 T 17-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 BJD13_16130 e36669fc2adea04db265ad0882cdcead 1235 SUPERFAMILY SSF52518 458 646 1.17E-11 T 17-10-2018 IPR029061 Thiamin diphosphate-binding fold BJD13_16130 e36669fc2adea04db265ad0882cdcead 1235 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 752 939 1.6E-21 T 17-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 BJD13_16130 e36669fc2adea04db265ad0882cdcead 1235 Gene3D G3DSA:3.40.50.970 25 239 1.4E-18 T 17-10-2018 BJD13_08925 6547798d0cc2daad434708b1e67779f1 440 SMART SM00116 227 276 3.4 T 17-10-2018 IPR000644 CBS domain BJD13_08925 6547798d0cc2daad434708b1e67779f1 440 SMART SM00116 290 338 4.4 T 17-10-2018 IPR000644 CBS domain BJD13_08925 6547798d0cc2daad434708b1e67779f1 440 Gene3D G3DSA:3.30.465.10 352 431 1.0E-17 T 17-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 BJD13_08925 6547798d0cc2daad434708b1e67779f1 440 Pfam PF00571 CBS domain 218 275 1.1E-4 T 17-10-2018 IPR000644 CBS domain BJD13_08925 6547798d0cc2daad434708b1e67779f1 440 Pfam PF00571 CBS domain 289 338 7.1E-6 T 17-10-2018 IPR000644 CBS domain BJD13_08925 6547798d0cc2daad434708b1e67779f1 440 SUPERFAMILY SSF54631 209 346 3.41E-24 T 17-10-2018 BJD13_08925 6547798d0cc2daad434708b1e67779f1 440 SMART SM01091 354 433 4.1E-22 T 17-10-2018 IPR005170 Transporter-associated domain BJD13_08925 6547798d0cc2daad434708b1e67779f1 440 SUPERFAMILY SSF56176 356 436 1.58E-17 T 17-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 BJD13_08925 6547798d0cc2daad434708b1e67779f1 440 Pfam PF03471 Transporter associated domain 357 432 2.8E-17 T 17-10-2018 IPR005170 Transporter-associated domain BJD13_08925 6547798d0cc2daad434708b1e67779f1 440 Pfam PF01595 Domain of unknown function DUF21 9 193 1.2E-46 T 17-10-2018 IPR002550 CNNM, transmembrane domain BJD13_08925 6547798d0cc2daad434708b1e67779f1 440 Gene3D G3DSA:3.10.580.10 202 346 8.6E-33 T 17-10-2018 BJD13_10185 4f095040828ee0efb6416c35953a64e5 356 Gene3D G3DSA:3.20.20.70 8 355 1.5E-87 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD13_10185 4f095040828ee0efb6416c35953a64e5 356 SUPERFAMILY SSF51412 13 331 6.26E-49 T 17-10-2018 BJD13_10185 4f095040828ee0efb6416c35953a64e5 356 Pfam PF03060 Nitronate monooxygenase 19 343 8.6E-61 T 17-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 BJD13_09310 528666628ecf2f3cd20511961359340d 521 SUPERFAMILY SSF103473 58 210 1.06E-16 T 17-10-2018 IPR036259 MFS transporter superfamily BJD13_09310 528666628ecf2f3cd20511961359340d 521 Gene3D G3DSA:1.20.1250.20 9 521 2.9E-150 T 17-10-2018 BJD13_09310 528666628ecf2f3cd20511961359340d 521 Pfam PF00854 POT family 91 462 2.4E-71 T 17-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 BJD13_09310 528666628ecf2f3cd20511961359340d 521 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 16 493 6.4E-46 T 17-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 BJD13_09310 528666628ecf2f3cd20511961359340d 521 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 80 104 - T 17-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 BJD13_10810 fcb7c9e79a7b746eb9ebf74e351719c7 326 SUPERFAMILY SSF51735 7 263 1.8E-56 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_10810 fcb7c9e79a7b746eb9ebf74e351719c7 326 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.8E-15 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_10810 fcb7c9e79a7b746eb9ebf74e351719c7 326 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.8E-15 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_10810 fcb7c9e79a7b746eb9ebf74e351719c7 326 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.8E-15 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_10810 fcb7c9e79a7b746eb9ebf74e351719c7 326 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 1.8E-15 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_10810 fcb7c9e79a7b746eb9ebf74e351719c7 326 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.8E-15 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_10810 fcb7c9e79a7b746eb9ebf74e351719c7 326 Gene3D G3DSA:3.40.50.720 6 265 1.1E-53 T 17-10-2018 BJD13_10810 fcb7c9e79a7b746eb9ebf74e351719c7 326 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 3.7E-5 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_10810 fcb7c9e79a7b746eb9ebf74e351719c7 326 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 3.7E-5 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_10810 fcb7c9e79a7b746eb9ebf74e351719c7 326 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 3.7E-5 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_10810 fcb7c9e79a7b746eb9ebf74e351719c7 326 Pfam PF00106 short chain dehydrogenase 8 193 6.3E-43 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_21060 8722d50a19062633cf8d065f0bef2976 132 Pfam PF04994 TfoX C-terminal domain 5 78 1.8E-26 T 17-10-2018 IPR007077 TfoX, C-terminal BJD13_21060 8722d50a19062633cf8d065f0bef2976 132 Gene3D G3DSA:1.10.150.20 2 85 1.3E-20 T 17-10-2018 BJD13_17240 4a9d701dcdacb4cd69c8c0d2332ca860 464 SUPERFAMILY SSF53590 110 359 1.83E-30 T 17-10-2018 IPR036452 Ribonucleoside hydrolase-like BJD13_17240 4a9d701dcdacb4cd69c8c0d2332ca860 464 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 113 408 4.2E-11 T 17-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain BJD13_17240 4a9d701dcdacb4cd69c8c0d2332ca860 464 Gene3D G3DSA:3.90.245.10 82 460 2.0E-124 T 17-10-2018 IPR036452 Ribonucleoside hydrolase-like BJD13_05505 792e4aac8c144c5e87cd610fab578410 253 SMART SM00450 117 218 1.9E-12 T 17-10-2018 IPR001763 Rhodanese-like domain BJD13_05505 792e4aac8c144c5e87cd610fab578410 253 Hamap MF_00469 UPF0176 protein YceA [yceA]. 1 253 33.24 T 17-10-2018 IPR020936 Uncharacterised protein family UPF0176 BJD13_05505 792e4aac8c144c5e87cd610fab578410 253 Gene3D G3DSA:3.40.250.10 98 248 1.4E-32 T 17-10-2018 IPR036873 Rhodanese-like domain superfamily BJD13_05505 792e4aac8c144c5e87cd610fab578410 253 SUPERFAMILY SSF52821 103 233 2.49E-25 T 17-10-2018 IPR036873 Rhodanese-like domain superfamily BJD13_05505 792e4aac8c144c5e87cd610fab578410 253 Pfam PF00581 Rhodanese-like domain 118 212 2.4E-6 T 17-10-2018 IPR001763 Rhodanese-like domain BJD13_05505 792e4aac8c144c5e87cd610fab578410 253 Gene3D G3DSA:3.30.70.100 1 94 7.8E-31 T 17-10-2018 BJD13_21010 cc470a1564e3ddcd7738e1bbc6602c3e 601 SUPERFAMILY SSF49503 184 402 6.51E-54 T 17-10-2018 IPR008972 Cupredoxin BJD13_21010 cc470a1564e3ddcd7738e1bbc6602c3e 601 Gene3D G3DSA:2.60.40.420 479 600 2.7E-32 T 17-10-2018 IPR008972 Cupredoxin BJD13_21010 cc470a1564e3ddcd7738e1bbc6602c3e 601 Pfam PF07732 Multicopper oxidase 70 179 1.8E-39 T 17-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 BJD13_21010 cc470a1564e3ddcd7738e1bbc6602c3e 601 ProSitePatterns PS00080 Multicopper oxidases signature 2. 582 593 - T 17-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 BJD13_21010 cc470a1564e3ddcd7738e1bbc6602c3e 601 ProSitePatterns PS00079 Multicopper oxidases signature 1. 155 175 - T 17-10-2018 IPR033138 Multicopper oxidases, conserved site BJD13_21010 cc470a1564e3ddcd7738e1bbc6602c3e 601 Gene3D G3DSA:2.60.40.420 185 403 3.4E-39 T 17-10-2018 IPR008972 Cupredoxin BJD13_21010 cc470a1564e3ddcd7738e1bbc6602c3e 601 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 23 43 0.0012 T 17-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal BJD13_21010 cc470a1564e3ddcd7738e1bbc6602c3e 601 Gene3D G3DSA:2.60.40.420 41 179 5.3E-38 T 17-10-2018 IPR008972 Cupredoxin BJD13_21010 cc470a1564e3ddcd7738e1bbc6602c3e 601 TIGRFAM TIGR01480 copper_res_A: copper-resistance protein, CopA family 21 600 7.7E-300 T 17-10-2018 IPR006376 Copper-resistance protein CopA GO:0005507|GO:0042597 BJD13_21010 cc470a1564e3ddcd7738e1bbc6602c3e 601 Pfam PF07731 Multicopper oxidase 489 600 2.3E-26 T 17-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 BJD13_21010 cc470a1564e3ddcd7738e1bbc6602c3e 601 SUPERFAMILY SSF49503 450 599 2.47E-36 T 17-10-2018 IPR008972 Cupredoxin BJD13_21010 cc470a1564e3ddcd7738e1bbc6602c3e 601 SUPERFAMILY SSF49503 71 211 9.17E-39 T 17-10-2018 IPR008972 Cupredoxin BJD13_21010 cc470a1564e3ddcd7738e1bbc6602c3e 601 ProSitePatterns PS00079 Multicopper oxidases signature 1. 577 597 - T 17-10-2018 IPR033138 Multicopper oxidases, conserved site BJD13_21010 cc470a1564e3ddcd7738e1bbc6602c3e 601 Pfam PF00394 Multicopper oxidase 190 367 2.4E-30 T 17-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 BJD13_12765 76032901b1d8d184703120b706df4372 275 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 4 273 4.7E-102 T 17-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 BJD13_12765 76032901b1d8d184703120b706df4372 275 SUPERFAMILY SSF51730 3 274 1.49E-90 T 17-10-2018 IPR029041 FAD-linked oxidoreductase-like BJD13_12765 76032901b1d8d184703120b706df4372 275 Pfam PF02219 Methylenetetrahydrofolate reductase 3 274 5.0E-86 T 17-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 BJD13_12765 76032901b1d8d184703120b706df4372 275 Gene3D G3DSA:3.20.20.220 1 275 3.8E-97 T 17-10-2018 BJD13_10255 caba06439e62598eb689ae3a93ac9280 148 Pfam PF00085 Thioredoxin 44 142 3.5E-25 T 17-10-2018 IPR013766 Thioredoxin domain GO:0045454 BJD13_10255 caba06439e62598eb689ae3a93ac9280 148 Gene3D G3DSA:2.20.28.140 6 38 5.9E-11 T 17-10-2018 BJD13_10255 caba06439e62598eb689ae3a93ac9280 148 SUPERFAMILY SSF52833 30 146 4.18E-36 T 17-10-2018 IPR036249 Thioredoxin-like superfamily BJD13_10255 caba06439e62598eb689ae3a93ac9280 148 PIRSF PIRSF000077 40 145 3.1E-27 T 17-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 BJD13_10255 caba06439e62598eb689ae3a93ac9280 148 Gene3D G3DSA:3.40.30.10 40 147 4.2E-29 T 17-10-2018 BJD13_10255 caba06439e62598eb689ae3a93ac9280 148 PRINTS PR00421 Thioredoxin family signature 69 78 1.8E-7 T 17-10-2018 BJD13_10255 caba06439e62598eb689ae3a93ac9280 148 PRINTS PR00421 Thioredoxin family signature 109 120 1.8E-7 T 17-10-2018 BJD13_10255 caba06439e62598eb689ae3a93ac9280 148 PRINTS PR00421 Thioredoxin family signature 61 69 1.8E-7 T 17-10-2018 BJD13_10255 caba06439e62598eb689ae3a93ac9280 148 ProSitePatterns PS00194 Thioredoxin family active site. 62 80 - T 17-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 BJD13_11545 745b17f552b5eabb85ba0fe585027486 102 Pfam PF00462 Glutaredoxin 16 75 6.3E-17 T 17-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 BJD13_11545 745b17f552b5eabb85ba0fe585027486 102 ProSitePatterns PS00195 Glutaredoxin active site. 18 34 - T 17-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 BJD13_11545 745b17f552b5eabb85ba0fe585027486 102 SUPERFAMILY SSF52833 8 95 8.17E-27 T 17-10-2018 IPR036249 Thioredoxin-like superfamily BJD13_11545 745b17f552b5eabb85ba0fe585027486 102 PRINTS PR00160 Glutaredoxin signature 16 34 2.9E-11 T 17-10-2018 IPR014025 Glutaredoxin subgroup BJD13_11545 745b17f552b5eabb85ba0fe585027486 102 PRINTS PR00160 Glutaredoxin signature 58 71 2.9E-11 T 17-10-2018 IPR014025 Glutaredoxin subgroup BJD13_11545 745b17f552b5eabb85ba0fe585027486 102 PRINTS PR00160 Glutaredoxin signature 72 85 2.9E-11 T 17-10-2018 IPR014025 Glutaredoxin subgroup BJD13_11545 745b17f552b5eabb85ba0fe585027486 102 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 16 94 3.4E-33 T 17-10-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 BJD13_11545 745b17f552b5eabb85ba0fe585027486 102 Gene3D G3DSA:3.40.30.10 14 98 1.4E-23 T 17-10-2018 BJD13_18820 e3b1250b2a6474c307dd456f19e5b276 1004 Pfam PF07715 TonB-dependent Receptor Plug Domain 69 176 3.8E-15 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_18820 e3b1250b2a6474c307dd456f19e5b276 1004 Pfam PF00593 TonB dependent receptor 458 1002 4.7E-34 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_18820 e3b1250b2a6474c307dd456f19e5b276 1004 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 50 1003 2.0E-200 T 17-10-2018 IPR010104 Bacterial TonB-dependent receptor BJD13_18820 e3b1250b2a6474c307dd456f19e5b276 1004 SUPERFAMILY SSF56935 44 1003 1.04E-91 T 17-10-2018 BJD13_18820 e3b1250b2a6474c307dd456f19e5b276 1004 Gene3D G3DSA:2.170.130.10 42 185 2.0E-17 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_04610 8f3e94147ff1a569abefa8f383854981 97 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 14 80 1.9E-26 T 17-10-2018 IPR002696 Putative membrane protein insertion efficiency factor BJD13_04610 8f3e94147ff1a569abefa8f383854981 97 Pfam PF01809 Haemolytic domain 12 77 1.8E-27 T 17-10-2018 IPR002696 Putative membrane protein insertion efficiency factor BJD13_04610 8f3e94147ff1a569abefa8f383854981 97 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 24 74 3.0E-23 T 17-10-2018 IPR002696 Putative membrane protein insertion efficiency factor BJD13_04610 8f3e94147ff1a569abefa8f383854981 97 SMART SM01234 10 77 1.1E-40 T 17-10-2018 IPR002696 Putative membrane protein insertion efficiency factor BJD13_04610 8f3e94147ff1a569abefa8f383854981 97 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 10 78 24.485 T 17-10-2018 IPR002696 Putative membrane protein insertion efficiency factor BJD13_04435 e69ceae13623f183ba26db81c16994be 393 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 361 368 5.1E-9 T 17-10-2018 BJD13_04435 e69ceae13623f183ba26db81c16994be 393 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 156 165 5.1E-9 T 17-10-2018 BJD13_04435 e69ceae13623f183ba26db81c16994be 393 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 5.1E-9 T 17-10-2018 BJD13_04435 e69ceae13623f183ba26db81c16994be 393 SUPERFAMILY SSF160996 191 339 1.44E-36 T 17-10-2018 BJD13_04435 e69ceae13623f183ba26db81c16994be 393 Gene3D G3DSA:3.50.50.60 7 390 2.4E-126 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_04435 e69ceae13623f183ba26db81c16994be 393 Gene3D G3DSA:1.10.8.260 262 321 2.4E-126 T 17-10-2018 IPR023166 HI0933-like insert domain superfamily BJD13_04435 e69ceae13623f183ba26db81c16994be 393 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 390 3.7E-124 T 17-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like BJD13_04435 e69ceae13623f183ba26db81c16994be 393 SUPERFAMILY SSF51905 1 391 1.21E-57 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_04435 e69ceae13623f183ba26db81c16994be 393 Gene3D G3DSA:2.40.30.10 189 338 2.4E-126 T 17-10-2018 BJD13_04435 e69ceae13623f183ba26db81c16994be 393 Pfam PF03486 HI0933-like protein 5 391 5.3E-143 T 17-10-2018 BJD13_04435 e69ceae13623f183ba26db81c16994be 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 4.4E-5 T 17-10-2018 BJD13_04435 e69ceae13623f183ba26db81c16994be 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 4.4E-5 T 17-10-2018 BJD13_04435 e69ceae13623f183ba26db81c16994be 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 346 368 4.4E-5 T 17-10-2018 BJD13_06455 806fa98216a65537c904e3b5b940790d 624 Pfam PF00460 Flagella basal body rod protein 4 33 7.2E-9 T 17-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 BJD13_06455 806fa98216a65537c904e3b5b940790d 624 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 565 620 1.1E-11 T 17-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BJD13_06455 806fa98216a65537c904e3b5b940790d 624 SUPERFAMILY SSF64518 427 621 1.57E-26 T 17-10-2018 BJD13_06455 806fa98216a65537c904e3b5b940790d 624 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 3 340 4.3E-68 T 17-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BJD13_06455 806fa98216a65537c904e3b5b940790d 624 SUPERFAMILY SSF64518 144 438 1.18E-25 T 17-10-2018 BJD13_06455 806fa98216a65537c904e3b5b940790d 624 PRINTS PR01005 Flagellar hook-associated protein signature 48 70 1.4E-17 T 17-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BJD13_06455 806fa98216a65537c904e3b5b940790d 624 PRINTS PR01005 Flagellar hook-associated protein signature 10 33 1.4E-17 T 17-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BJD13_06455 806fa98216a65537c904e3b5b940790d 624 PRINTS PR01005 Flagellar hook-associated protein signature 122 142 1.4E-17 T 17-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BJD13_06455 806fa98216a65537c904e3b5b940790d 624 PRINTS PR01005 Flagellar hook-associated protein signature 155 179 1.4E-17 T 17-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BJD13_06455 806fa98216a65537c904e3b5b940790d 624 PRINTS PR01005 Flagellar hook-associated protein signature 353 375 1.4E-17 T 17-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BJD13_06455 806fa98216a65537c904e3b5b940790d 624 PRINTS PR01005 Flagellar hook-associated protein signature 403 420 1.4E-17 T 17-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BJD13_15730 dac0b7a06e08cedd1673aeae7da31803 675 SUPERFAMILY SSF56059 96 356 6.89E-68 T 17-10-2018 BJD13_15730 dac0b7a06e08cedd1673aeae7da31803 675 Gene3D G3DSA:3.30.470.130 5 463 7.6E-200 T 17-10-2018 BJD13_15730 dac0b7a06e08cedd1673aeae7da31803 675 Gene3D G3DSA:3.30.700.40 466 595 2.6E-6 T 17-10-2018 BJD13_15730 dac0b7a06e08cedd1673aeae7da31803 675 SUPERFAMILY SSF51230 596 669 1.11E-19 T 17-10-2018 IPR011053 Single hybrid motif BJD13_15730 dac0b7a06e08cedd1673aeae7da31803 675 Pfam PF00289 Biotin carboxylase, N-terminal domain 15 123 6.1E-46 T 17-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BJD13_15730 dac0b7a06e08cedd1673aeae7da31803 675 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 299 306 - T 17-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BJD13_15730 dac0b7a06e08cedd1673aeae7da31803 675 SUPERFAMILY SSF51246 344 461 2.04E-37 T 17-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 BJD13_15730 dac0b7a06e08cedd1673aeae7da31803 675 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 166 180 - T 17-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BJD13_15730 dac0b7a06e08cedd1673aeae7da31803 675 Pfam PF00364 Biotin-requiring enzyme 605 669 1.0E-13 T 17-10-2018 IPR000089 Biotin/lipoyl attachment BJD13_15730 dac0b7a06e08cedd1673aeae7da31803 675 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 627 644 - T 17-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BJD13_15730 dac0b7a06e08cedd1673aeae7da31803 675 SMART SM00878 349 456 1.5E-54 T 17-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BJD13_15730 dac0b7a06e08cedd1673aeae7da31803 675 Pfam PF02785 Biotin carboxylase C-terminal domain 349 457 4.2E-37 T 17-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BJD13_15730 dac0b7a06e08cedd1673aeae7da31803 675 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 335 5.5E-73 T 17-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BJD13_15730 dac0b7a06e08cedd1673aeae7da31803 675 SUPERFAMILY SSF52440 12 126 4.75E-50 T 17-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BJD13_15730 dac0b7a06e08cedd1673aeae7da31803 675 Gene3D G3DSA:2.40.50.100 596 672 4.5E-22 T 17-10-2018 BJD13_04445 4a67acc8f6b5303d66a2280d62926bff 69 SUPERFAMILY SSF50249 2 68 7.71E-24 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD13_04445 4a67acc8f6b5303d66a2280d62926bff 69 PRINTS PR00050 Cold shock protein signature 7 22 2.5E-16 T 17-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BJD13_04445 4a67acc8f6b5303d66a2280d62926bff 69 PRINTS PR00050 Cold shock protein signature 42 60 2.5E-16 T 17-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BJD13_04445 4a67acc8f6b5303d66a2280d62926bff 69 PRINTS PR00050 Cold shock protein signature 27 36 2.5E-16 T 17-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BJD13_04445 4a67acc8f6b5303d66a2280d62926bff 69 Gene3D G3DSA:2.40.50.140 5 68 1.7E-27 T 17-10-2018 BJD13_04445 4a67acc8f6b5303d66a2280d62926bff 69 PIRSF PIRSF002599 1 69 1.5E-21 T 17-10-2018 IPR012156 Cold shock, CspA GO:0003676 BJD13_04445 4a67acc8f6b5303d66a2280d62926bff 69 SMART SM00357 6 69 1.0E-27 T 17-10-2018 IPR011129 Cold shock domain GO:0003676 BJD13_04445 4a67acc8f6b5303d66a2280d62926bff 69 Pfam PF00313 'Cold-shock' DNA-binding domain 6 68 7.3E-28 T 17-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BJD13_04445 4a67acc8f6b5303d66a2280d62926bff 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 17-10-2018 IPR019844 Cold-shock conserved site BJD13_06975 432a95d446834fd6eb731c42cc01b514 289 Gene3D G3DSA:3.90.226.10 8 229 6.6E-90 T 17-10-2018 BJD13_06975 432a95d446834fd6eb731c42cc01b514 289 Pfam PF00378 Enoyl-CoA hydratase/isomerase 73 236 5.0E-20 T 17-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 BJD13_06975 432a95d446834fd6eb731c42cc01b514 289 SUPERFAMILY SSF52096 72 265 3.95E-35 T 17-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BJD13_13360 0086fd6cab6276712880b724016d44fe 232 PIRSF PIRSF016262 16 230 8.1E-61 T 17-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 BJD13_13360 0086fd6cab6276712880b724016d44fe 232 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 83 98 - T 17-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 BJD13_13360 0086fd6cab6276712880b724016d44fe 232 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 87 140 6.0E-25 T 17-10-2018 BJD13_13360 0086fd6cab6276712880b724016d44fe 232 Pfam PF03099 Biotin/lipoate A/B protein ligase family 74 171 2.5E-9 T 17-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 BJD13_13360 0086fd6cab6276712880b724016d44fe 232 Gene3D G3DSA:3.30.930.10 13 216 5.4E-67 T 17-10-2018 BJD13_13360 0086fd6cab6276712880b724016d44fe 232 SUPERFAMILY SSF55681 16 218 1.33E-70 T 17-10-2018 BJD13_13360 0086fd6cab6276712880b724016d44fe 232 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 39 213 1.1E-64 T 17-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 BJD13_13360 0086fd6cab6276712880b724016d44fe 232 Hamap MF_00013 Octanoyltransferase [lipB]. 17 218 38.956 T 17-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 BJD13_08730 6a740ced817e40640732bbab6d89a7f7 363 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 52 359 3.1E-124 T 17-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 BJD13_08730 6a740ced817e40640732bbab6d89a7f7 363 SUPERFAMILY SSF53850 52 359 1.86E-97 T 17-10-2018 BJD13_08730 6a740ced817e40640732bbab6d89a7f7 363 PIRSF PIRSF002756 4 361 8.9E-106 T 17-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 BJD13_08730 6a740ced817e40640732bbab6d89a7f7 363 Gene3D G3DSA:3.40.190.10 126 302 9.7E-128 T 17-10-2018 BJD13_08730 6a740ced817e40640732bbab6d89a7f7 363 Pfam PF12849 PBP superfamily domain 43 332 6.0E-60 T 17-10-2018 IPR024370 PBP domain BJD13_08730 6a740ced817e40640732bbab6d89a7f7 363 Gene3D G3DSA:3.40.190.10 53 349 9.7E-128 T 17-10-2018 BJD13_15805 c10ea509d9b2fd28b467ee99bce4ef17 729 Gene3D G3DSA:1.10.1370.40 78 721 1.4E-250 T 17-10-2018 BJD13_15805 c10ea509d9b2fd28b467ee99bce4ef17 729 Gene3D G3DSA:1.10.1370.10 189 659 1.4E-250 T 17-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 BJD13_15805 c10ea509d9b2fd28b467ee99bce4ef17 729 Pfam PF01432 Peptidase family M3 273 726 6.7E-135 T 17-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 BJD13_15805 c10ea509d9b2fd28b467ee99bce4ef17 729 SUPERFAMILY SSF55486 48 726 2.47E-180 T 17-10-2018 BJD13_15495 274a70de156ac3baba9e4e71881e9863 380 SUPERFAMILY SSF53590 11 350 6.28E-59 T 17-10-2018 IPR036452 Ribonucleoside hydrolase-like BJD13_15495 274a70de156ac3baba9e4e71881e9863 380 Gene3D G3DSA:3.90.245.10 8 351 1.2E-72 T 17-10-2018 IPR036452 Ribonucleoside hydrolase-like BJD13_15495 274a70de156ac3baba9e4e71881e9863 380 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 25 342 8.1E-51 T 17-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain BJD13_06210 22c33319fafd5c5828c9d46a56b84235 465 Gene3D G3DSA:3.40.50.300 5 168 2.6E-43 T 17-10-2018 BJD13_06210 22c33319fafd5c5828c9d46a56b84235 465 SMART SM00382 1 148 3.8 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_06210 22c33319fafd5c5828c9d46a56b84235 465 SMART SM00382 177 325 0.13 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_06210 22c33319fafd5c5828c9d46a56b84235 465 PIRSF PIRSF006485 1 442 2.7E-167 T 17-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 BJD13_06210 22c33319fafd5c5828c9d46a56b84235 465 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 356 434 1.2E-23 T 17-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like BJD13_06210 22c33319fafd5c5828c9d46a56b84235 465 SUPERFAMILY SSF52540 1 166 2.99E-47 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_06210 22c33319fafd5c5828c9d46a56b84235 465 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 159 6.4E-25 T 17-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BJD13_06210 22c33319fafd5c5828c9d46a56b84235 465 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 179 344 3.7E-26 T 17-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BJD13_06210 22c33319fafd5c5828c9d46a56b84235 465 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 434 7.9E-166 T 17-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 BJD13_06210 22c33319fafd5c5828c9d46a56b84235 465 Hamap MF_00195 GTPase Der [der]. 2 437 36.841 T 17-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 BJD13_06210 22c33319fafd5c5828c9d46a56b84235 465 Gene3D G3DSA:3.30.300.20 355 436 2.3E-20 T 17-10-2018 IPR015946 K homology domain-like, alpha/beta BJD13_06210 22c33319fafd5c5828c9d46a56b84235 465 Gene3D G3DSA:3.40.50.300 175 350 7.7E-48 T 17-10-2018 BJD13_06210 22c33319fafd5c5828c9d46a56b84235 465 Pfam PF01926 50S ribosome-binding GTPase 180 298 6.7E-24 T 17-10-2018 IPR006073 GTP binding domain GO:0005525 BJD13_06210 22c33319fafd5c5828c9d46a56b84235 465 Pfam PF01926 50S ribosome-binding GTPase 5 120 1.2E-26 T 17-10-2018 IPR006073 GTP binding domain GO:0005525 BJD13_06210 22c33319fafd5c5828c9d46a56b84235 465 SUPERFAMILY SSF52540 139 440 3.83E-62 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_06210 22c33319fafd5c5828c9d46a56b84235 465 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 73 91 1.7E-8 T 17-10-2018 IPR006073 GTP binding domain GO:0005525 BJD13_06210 22c33319fafd5c5828c9d46a56b84235 465 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.7E-8 T 17-10-2018 IPR006073 GTP binding domain GO:0005525 BJD13_01870 e5c8e8a6d356e5fad7d945eff7342f7f 339 SUPERFAMILY SSF56112 17 307 1.02E-37 T 17-10-2018 IPR011009 Protein kinase-like domain superfamily BJD13_01870 e5c8e8a6d356e5fad7d945eff7342f7f 339 Gene3D G3DSA:3.90.1200.10 98 337 5.0E-60 T 17-10-2018 BJD13_01870 e5c8e8a6d356e5fad7d945eff7342f7f 339 Pfam PF01636 Phosphotransferase enzyme family 30 251 3.1E-25 T 17-10-2018 IPR002575 Aminoglycoside phosphotransferase BJD13_01870 e5c8e8a6d356e5fad7d945eff7342f7f 339 Gene3D G3DSA:3.30.200.20 9 97 1.0E-16 T 17-10-2018 BJD13_02895 0b341b9acbe6ac17b50f60d4aff1f7f0 698 Gene3D G3DSA:3.40.390.10 54 698 1.2E-219 T 17-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 BJD13_02895 0b341b9acbe6ac17b50f60d4aff1f7f0 698 SUPERFAMILY SSF55486 48 698 5.86E-201 T 17-10-2018 BJD13_02895 0b341b9acbe6ac17b50f60d4aff1f7f0 698 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 481 493 1.5E-22 T 17-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 BJD13_02895 0b341b9acbe6ac17b50f60d4aff1f7f0 698 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 499 511 1.5E-22 T 17-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 BJD13_02895 0b341b9acbe6ac17b50f60d4aff1f7f0 698 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 594 605 1.5E-22 T 17-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 BJD13_02895 0b341b9acbe6ac17b50f60d4aff1f7f0 698 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 520 536 1.5E-22 T 17-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 BJD13_02895 0b341b9acbe6ac17b50f60d4aff1f7f0 698 Pfam PF01431 Peptidase family M13 489 695 3.3E-69 T 17-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 BJD13_02895 0b341b9acbe6ac17b50f60d4aff1f7f0 698 Gene3D G3DSA:1.10.1380.10 85 476 1.2E-219 T 17-10-2018 BJD13_02895 0b341b9acbe6ac17b50f60d4aff1f7f0 698 Pfam PF05649 Peptidase family M13 60 437 3.9E-84 T 17-10-2018 IPR008753 Peptidase M13, N-terminal domain GO:0006508 BJD13_04085 8f7b82adb299b4c164fdad90b7916ab5 782 SUPERFAMILY SSF50692 645 767 1.94E-17 T 17-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily BJD13_04085 8f7b82adb299b4c164fdad90b7916ab5 782 PIRSF PIRSF000144 1 768 0.0 T 17-10-2018 BJD13_04085 8f7b82adb299b4c164fdad90b7916ab5 782 SUPERFAMILY SSF53706 48 633 4.45E-144 T 17-10-2018 BJD13_04085 8f7b82adb299b4c164fdad90b7916ab5 782 Gene3D G3DSA:3.40.50.740 121 516 5.3E-68 T 17-10-2018 BJD13_04085 8f7b82adb299b4c164fdad90b7916ab5 782 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 13 762 4.4E-287 T 17-10-2018 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 BJD13_04085 8f7b82adb299b4c164fdad90b7916ab5 782 Pfam PF01568 Molydopterin dinucleotide binding domain 650 757 3.5E-10 T 17-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 BJD13_04085 8f7b82adb299b4c164fdad90b7916ab5 782 Pfam PF00384 Molybdopterin oxidoreductase 109 494 3.2E-26 T 17-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_04085 8f7b82adb299b4c164fdad90b7916ab5 782 Gene3D G3DSA:3.40.228.10 185 412 5.3E-68 T 17-10-2018 BJD13_06540 7cee00531fdb2479359c57ccc4047b7b 381 SUPERFAMILY SSF50022 4 142 4.84E-34 T 17-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 BJD13_06540 7cee00531fdb2479359c57ccc4047b7b 381 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 164 186 1.1E-8 T 17-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 BJD13_06540 7cee00531fdb2479359c57ccc4047b7b 381 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 82 102 1.1E-8 T 17-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 BJD13_06540 7cee00531fdb2479359c57ccc4047b7b 381 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 126 152 1.1E-8 T 17-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 BJD13_06540 7cee00531fdb2479359c57ccc4047b7b 381 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 12 37 1.1E-8 T 17-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 BJD13_06540 7cee00531fdb2479359c57ccc4047b7b 381 SUPERFAMILY SSF55961 149 373 5.34E-26 T 17-10-2018 BJD13_06540 7cee00531fdb2479359c57ccc4047b7b 381 Gene3D G3DSA:2.102.10.10 25 151 8.4E-45 T 17-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 BJD13_06540 7cee00531fdb2479359c57ccc4047b7b 381 Pfam PF00355 Rieske [2Fe-2S] domain 37 109 2.3E-13 T 17-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 BJD13_06540 7cee00531fdb2479359c57ccc4047b7b 381 Gene3D G3DSA:3.90.380.10 4 351 8.4E-45 T 17-10-2018 BJD13_06540 7cee00531fdb2479359c57ccc4047b7b 381 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 173 375 7.8E-14 T 17-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 BJD13_10845 ae4416dc78faafdaf1d93a02f009e06f 262 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 25 34 - T 17-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 BJD13_10845 ae4416dc78faafdaf1d93a02f009e06f 262 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 23 237 9.7E-34 T 17-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 BJD13_10845 ae4416dc78faafdaf1d93a02f009e06f 262 SMART SM00855 22 196 3.3E-20 T 17-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 BJD13_10845 ae4416dc78faafdaf1d93a02f009e06f 262 SUPERFAMILY SSF53254 20 238 6.15E-43 T 17-10-2018 IPR029033 Histidine phosphatase superfamily BJD13_10845 ae4416dc78faafdaf1d93a02f009e06f 262 PIRSF PIRSF000709 17 211 9.5E-22 T 17-10-2018 BJD13_10845 ae4416dc78faafdaf1d93a02f009e06f 262 Gene3D G3DSA:3.40.50.1240 19 239 5.8E-44 T 17-10-2018 IPR029033 Histidine phosphatase superfamily BJD13_24105 0354883efed03052adc3cb767167b594 188 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 17-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 BJD13_24105 0354883efed03052adc3cb767167b594 188 SMART SM00857 3 137 1.3E-61 T 17-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 BJD13_24105 0354883efed03052adc3cb767167b594 188 SUPERFAMILY SSF53041 1 136 1.57E-45 T 17-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 BJD13_24105 0354883efed03052adc3cb767167b594 188 SUPERFAMILY SSF46689 139 182 5.85E-7 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_24105 0354883efed03052adc3cb767167b594 188 Gene3D G3DSA:3.40.50.1390 2 126 9.6E-49 T 17-10-2018 BJD13_24105 0354883efed03052adc3cb767167b594 188 Pfam PF00239 Resolvase, N terminal domain 4 137 1.4E-45 T 17-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 BJD13_13535 d3dc82fa5822f529c3002bbe0300bbef 223 Gene3D G3DSA:3.30.450.40 43 221 2.1E-43 T 17-10-2018 IPR029016 GAF-like domain superfamily BJD13_13535 d3dc82fa5822f529c3002bbe0300bbef 223 Pfam PF04340 Protein of unknown function, DUF484 4 223 2.5E-64 T 17-10-2018 IPR007435 Protein of unknown function DUF484 BJD13_17405 e89414edf23fd30494f46b78005e1a9a 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 1.6E-19 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_17405 e89414edf23fd30494f46b78005e1a9a 300 Gene3D G3DSA:3.40.190.290 93 295 3.6E-56 T 17-10-2018 BJD13_17405 e89414edf23fd30494f46b78005e1a9a 300 Pfam PF03466 LysR substrate binding domain 90 295 2.7E-44 T 17-10-2018 IPR005119 LysR, substrate-binding BJD13_17405 e89414edf23fd30494f46b78005e1a9a 300 SUPERFAMILY SSF53850 90 299 2.71E-44 T 17-10-2018 BJD13_17405 e89414edf23fd30494f46b78005e1a9a 300 SUPERFAMILY SSF46785 5 90 4.99E-22 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_17405 e89414edf23fd30494f46b78005e1a9a 300 Gene3D G3DSA:1.10.10.10 5 91 4.1E-25 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_10510 16f31c0b7cdb8dd88dda830b103503a0 213 SMART SM00421 150 207 1.0E-25 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_10510 16f31c0b7cdb8dd88dda830b103503a0 213 SUPERFAMILY SSF46894 145 212 3.74E-22 T 17-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BJD13_10510 16f31c0b7cdb8dd88dda830b103503a0 213 SUPERFAMILY SSF52172 1 133 2.7E-35 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_10510 16f31c0b7cdb8dd88dda830b103503a0 213 Pfam PF00072 Response regulator receiver domain 4 115 1.1E-29 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_10510 16f31c0b7cdb8dd88dda830b103503a0 213 Gene3D G3DSA:3.40.50.12740 2 213 9.6E-72 T 17-10-2018 BJD13_10510 16f31c0b7cdb8dd88dda830b103503a0 213 ProSitePatterns PS00622 LuxR-type HTH domain signature. 167 194 - T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_10510 16f31c0b7cdb8dd88dda830b103503a0 213 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 206 1.0E-20 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_10510 16f31c0b7cdb8dd88dda830b103503a0 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 2.1E-15 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_10510 16f31c0b7cdb8dd88dda830b103503a0 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 2.1E-15 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_10510 16f31c0b7cdb8dd88dda830b103503a0 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 2.1E-15 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_10510 16f31c0b7cdb8dd88dda830b103503a0 213 SMART SM00448 2 115 3.6E-35 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_12515 12af080c573eabf158fb331db7a5ada8 298 Pfam PF04536 TPM domain 35 157 5.5E-37 T 17-10-2018 IPR007621 TPM domain BJD13_12515 12af080c573eabf158fb331db7a5ada8 298 Gene3D G3DSA:3.10.310.50 21 168 3.6E-46 T 17-10-2018 BJD13_06405 5e6bebc69e05ab6f84f75da36bb9300e 133 Pfam PF00460 Flagella basal body rod protein 11 39 7.9E-8 T 17-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 BJD13_06405 5e6bebc69e05ab6f84f75da36bb9300e 133 PIRSF PIRSF002889 1 133 5.3E-35 T 17-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 BJD13_06405 5e6bebc69e05ab6f84f75da36bb9300e 133 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 130 3.7E-29 T 17-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 BJD13_06405 5e6bebc69e05ab6f84f75da36bb9300e 133 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 17-10-2018 IPR019776 Flagellar basal body rod protein, conserved site BJD13_12465 95bf6cb41861766431f7082ed3d97d2c 463 Gene3D G3DSA:3.10.50.40 178 280 2.2E-67 T 17-10-2018 BJD13_12465 95bf6cb41861766431f7082ed3d97d2c 463 Pfam PF00639 PPIC-type PPIASE domain 181 275 8.8E-16 T 17-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 BJD13_12465 95bf6cb41861766431f7082ed3d97d2c 463 Gene3D G3DSA:1.10.4030.10 27 152 1.1E-35 T 17-10-2018 BJD13_12465 95bf6cb41861766431f7082ed3d97d2c 463 Hamap MF_01183 Chaperone SurA [surA]. 9 434 32.196 T 17-10-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 BJD13_12465 95bf6cb41861766431f7082ed3d97d2c 463 Gene3D G3DSA:3.10.50.40 287 392 2.2E-67 T 17-10-2018 BJD13_12465 95bf6cb41861766431f7082ed3d97d2c 463 Pfam PF13616 PPIC-type PPIASE domain 284 385 9.3E-26 T 17-10-2018 BJD13_12465 95bf6cb41861766431f7082ed3d97d2c 463 SUPERFAMILY SSF109998 31 203 7.22E-41 T 17-10-2018 IPR027304 Trigger factor/SurA domain superfamily BJD13_12465 95bf6cb41861766431f7082ed3d97d2c 463 Pfam PF09312 SurA N-terminal domain 31 148 1.5E-45 T 17-10-2018 IPR015391 SurA N-terminal BJD13_12465 95bf6cb41861766431f7082ed3d97d2c 463 SUPERFAMILY SSF54534 176 281 3.27E-25 T 17-10-2018 BJD13_12465 95bf6cb41861766431f7082ed3d97d2c 463 SUPERFAMILY SSF54534 290 390 1.44E-27 T 17-10-2018 BJD13_18135 4eeffa52489727c5c654600dcd8ea2f6 105 Pfam PF04341 Protein of unknown function, DUF485 14 101 2.2E-33 T 17-10-2018 IPR007436 Protein of unknown function DUF485 BJD13_17795 c01163655ab2cdf4c2bb2a7be0d114a0 564 Gene3D G3DSA:2.115.10.20 51 354 4.9E-90 T 17-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily BJD13_17795 c01163655ab2cdf4c2bb2a7be0d114a0 564 Pfam PF04616 Glycosyl hydrolases family 43 52 344 2.0E-96 T 17-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 BJD13_17795 c01163655ab2cdf4c2bb2a7be0d114a0 564 Gene3D G3DSA:2.60.120.200 378 562 1.5E-46 T 17-10-2018 BJD13_17795 c01163655ab2cdf4c2bb2a7be0d114a0 564 SUPERFAMILY SSF75005 52 352 1.7E-85 T 17-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily BJD13_17795 c01163655ab2cdf4c2bb2a7be0d114a0 564 SUPERFAMILY SSF49899 375 557 4.35E-45 T 17-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily BJD13_18660 91fe7ee9e864b3d2d302486c165e5fa8 603 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 14 282 3.8E-77 T 17-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 BJD13_18660 91fe7ee9e864b3d2d302486c165e5fa8 603 Gene3D G3DSA:1.20.1530.20 6 379 1.1E-80 T 17-10-2018 IPR038770 Sodium/solute symporter superfamily BJD13_18660 91fe7ee9e864b3d2d302486c165e5fa8 603 Pfam PF02254 TrkA-N domain 404 513 1.2E-26 T 17-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 BJD13_18660 91fe7ee9e864b3d2d302486c165e5fa8 603 Pfam PF00999 Sodium/hydrogen exchanger family 10 371 4.3E-62 T 17-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 BJD13_18660 91fe7ee9e864b3d2d302486c165e5fa8 603 Gene3D G3DSA:3.40.50.720 401 562 1.3E-38 T 17-10-2018 BJD13_18660 91fe7ee9e864b3d2d302486c165e5fa8 603 SUPERFAMILY SSF51735 402 535 1.48E-30 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_04890 dbe2da6d078d243faee784b87a671b0e 294 Pfam PF00795 Carbon-nitrogen hydrolase 8 271 2.5E-57 T 17-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 BJD13_04890 dbe2da6d078d243faee784b87a671b0e 294 Gene3D G3DSA:3.60.110.10 2 292 7.6E-98 T 17-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily BJD13_04890 dbe2da6d078d243faee784b87a671b0e 294 SUPERFAMILY SSF56317 7 291 2.62E-88 T 17-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily BJD13_16030 bd55f61778f7841bc07c8a4d6fb60b80 112 SUPERFAMILY SSF54913 1 112 4.45E-46 T 17-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta BJD13_16030 bd55f61778f7841bc07c8a4d6fb60b80 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 8.1E-43 T 17-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BJD13_16030 bd55f61778f7841bc07c8a4d6fb60b80 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 17-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 BJD13_16030 bd55f61778f7841bc07c8a4d6fb60b80 112 PIRSF PIRSF039144 1 112 1.3E-53 T 17-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BJD13_16030 bd55f61778f7841bc07c8a4d6fb60b80 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 17-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 BJD13_16030 bd55f61778f7841bc07c8a4d6fb60b80 112 SMART SM00938 4 105 2.8E-67 T 17-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BJD13_16030 bd55f61778f7841bc07c8a4d6fb60b80 112 PRINTS PR00340 P-II protein signature 83 103 5.6E-44 T 17-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BJD13_16030 bd55f61778f7841bc07c8a4d6fb60b80 112 PRINTS PR00340 P-II protein signature 2 17 5.6E-44 T 17-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BJD13_16030 bd55f61778f7841bc07c8a4d6fb60b80 112 PRINTS PR00340 P-II protein signature 23 41 5.6E-44 T 17-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BJD13_16030 bd55f61778f7841bc07c8a4d6fb60b80 112 PRINTS PR00340 P-II protein signature 52 75 5.6E-44 T 17-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BJD13_16030 bd55f61778f7841bc07c8a4d6fb60b80 112 Gene3D G3DSA:3.30.70.120 1 112 6.2E-47 T 17-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BJD13_14500 ba62f8b0f5c1b11bb2ec64475d0a6d11 491 Pfam PF00425 chorismate binding enzyme 223 476 2.6E-97 T 17-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal BJD13_14500 ba62f8b0f5c1b11bb2ec64475d0a6d11 491 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 27 484 5.6E-166 T 17-10-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BJD13_14500 ba62f8b0f5c1b11bb2ec64475d0a6d11 491 PRINTS PR00095 Anthranilate synthase component I signature 433 447 1.4E-22 T 17-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BJD13_14500 ba62f8b0f5c1b11bb2ec64475d0a6d11 491 PRINTS PR00095 Anthranilate synthase component I signature 338 351 1.4E-22 T 17-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BJD13_14500 ba62f8b0f5c1b11bb2ec64475d0a6d11 491 PRINTS PR00095 Anthranilate synthase component I signature 324 337 1.4E-22 T 17-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BJD13_14500 ba62f8b0f5c1b11bb2ec64475d0a6d11 491 PRINTS PR00095 Anthranilate synthase component I signature 418 432 1.4E-22 T 17-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BJD13_14500 ba62f8b0f5c1b11bb2ec64475d0a6d11 491 Pfam PF04715 Anthranilate synthase component I, N terminal region 27 170 1.6E-29 T 17-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BJD13_14500 ba62f8b0f5c1b11bb2ec64475d0a6d11 491 Gene3D G3DSA:3.60.120.10 2 490 7.2E-179 T 17-10-2018 IPR005801 ADC synthase GO:0009058 BJD13_14500 ba62f8b0f5c1b11bb2ec64475d0a6d11 491 SUPERFAMILY SSF56322 16 484 7.72E-156 T 17-10-2018 IPR005801 ADC synthase GO:0009058 BJD13_10400 aaa9984b3fc9a59b77d5377ab6b856f1 106 ProSitePatterns PS01169 Ribosomal protein L21 signature. 71 93 - T 17-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_10400 aaa9984b3fc9a59b77d5377ab6b856f1 106 SUPERFAMILY SSF141091 1 100 1.19E-33 T 17-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_10400 aaa9984b3fc9a59b77d5377ab6b856f1 106 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 100 5.1E-34 T 17-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_10400 aaa9984b3fc9a59b77d5377ab6b856f1 106 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 102 25.564 T 17-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_10400 aaa9984b3fc9a59b77d5377ab6b856f1 106 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 100 7.1E-37 T 17-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_04640 fed94704d1a1b8ee720a9d0d13d0a618 343 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 4 161 2.7E-36 T 17-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 BJD13_04640 fed94704d1a1b8ee720a9d0d13d0a618 343 PRINTS PR00101 Aspartate carbamoyltransferase signature 35 57 2.1E-10 T 17-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BJD13_04640 fed94704d1a1b8ee720a9d0d13d0a618 343 PRINTS PR00101 Aspartate carbamoyltransferase signature 147 164 2.1E-10 T 17-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BJD13_04640 fed94704d1a1b8ee720a9d0d13d0a618 343 PRINTS PR00101 Aspartate carbamoyltransferase signature 315 329 2.1E-10 T 17-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BJD13_04640 fed94704d1a1b8ee720a9d0d13d0a618 343 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 299 322 7.8E-13 T 17-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BJD13_04640 fed94704d1a1b8ee720a9d0d13d0a618 343 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 45 64 7.8E-13 T 17-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BJD13_04640 fed94704d1a1b8ee720a9d0d13d0a618 343 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 287 296 7.8E-13 T 17-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BJD13_04640 fed94704d1a1b8ee720a9d0d13d0a618 343 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 170 332 1.7E-33 T 17-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 BJD13_04640 fed94704d1a1b8ee720a9d0d13d0a618 343 Gene3D G3DSA:3.40.50.1370 5 167 7.7E-121 T 17-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 BJD13_04640 fed94704d1a1b8ee720a9d0d13d0a618 343 SUPERFAMILY SSF53671 2 335 1.99E-73 T 17-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 BJD13_04640 fed94704d1a1b8ee720a9d0d13d0a618 343 Gene3D G3DSA:3.40.50.1370 168 331 7.7E-121 T 17-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 BJD13_07590 c40309a4568e336a59d845d9494f4b7f 328 Gene3D G3DSA:3.20.20.80 18 325 1.9E-80 T 17-10-2018 BJD13_07590 c40309a4568e336a59d845d9494f4b7f 328 SUPERFAMILY SSF51445 26 319 2.52E-70 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily BJD13_07590 c40309a4568e336a59d845d9494f4b7f 328 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 146 155 - T 17-10-2018 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 BJD13_07590 c40309a4568e336a59d845d9494f4b7f 328 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 38 283 6.8E-32 T 17-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 BJD13_03845 b8816d338a079ed60bd4f2475383e2e1 634 PRINTS PR00775 90kDa heat shock protein signature 29 51 6.1E-58 T 17-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal BJD13_03845 b8816d338a079ed60bd4f2475383e2e1 634 PRINTS PR00775 90kDa heat shock protein signature 78 95 6.1E-58 T 17-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal BJD13_03845 b8816d338a079ed60bd4f2475383e2e1 634 PRINTS PR00775 90kDa heat shock protein signature 123 145 6.1E-58 T 17-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal BJD13_03845 b8816d338a079ed60bd4f2475383e2e1 634 PRINTS PR00775 90kDa heat shock protein signature 193 211 6.1E-58 T 17-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal BJD13_03845 b8816d338a079ed60bd4f2475383e2e1 634 PRINTS PR00775 90kDa heat shock protein signature 8 28 6.1E-58 T 17-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal BJD13_03845 b8816d338a079ed60bd4f2475383e2e1 634 PRINTS PR00775 90kDa heat shock protein signature 96 113 6.1E-58 T 17-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal BJD13_03845 b8816d338a079ed60bd4f2475383e2e1 634 PRINTS PR00775 90kDa heat shock protein signature 175 192 6.1E-58 T 17-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal BJD13_03845 b8816d338a079ed60bd4f2475383e2e1 634 SUPERFAMILY SSF54211 236 491 3.41E-94 T 17-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BJD13_03845 b8816d338a079ed60bd4f2475383e2e1 634 Hamap MF_00505 Chaperone protein HtpG [htpG]. 5 630 31.935 T 17-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 BJD13_03845 b8816d338a079ed60bd4f2475383e2e1 634 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 28 37 - T 17-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 BJD13_03845 b8816d338a079ed60bd4f2475383e2e1 634 Gene3D G3DSA:3.30.230.80 235 402 2.8E-67 T 17-10-2018 BJD13_03845 b8816d338a079ed60bd4f2475383e2e1 634 Gene3D G3DSA:1.20.120.790 498 631 5.9E-40 T 17-10-2018 IPR037196 HSP90, C-terminal domain BJD13_03845 b8816d338a079ed60bd4f2475383e2e1 634 SMART SM00387 30 187 6.2E-10 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_03845 b8816d338a079ed60bd4f2475383e2e1 634 Gene3D G3DSA:3.30.565.10 1 226 4.2E-75 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_03845 b8816d338a079ed60bd4f2475383e2e1 634 Gene3D G3DSA:3.40.50.11260 403 492 8.7E-32 T 17-10-2018 BJD13_03845 b8816d338a079ed60bd4f2475383e2e1 634 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 30 185 3.3E-12 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_03845 b8816d338a079ed60bd4f2475383e2e1 634 Pfam PF00183 Hsp90 protein 228 629 1.4E-125 T 17-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 BJD13_03845 b8816d338a079ed60bd4f2475383e2e1 634 SUPERFAMILY SSF55874 8 218 5.76E-64 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_03845 b8816d338a079ed60bd4f2475383e2e1 634 SUPERFAMILY SSF110942 518 630 9.15E-33 T 17-10-2018 IPR037196 HSP90, C-terminal domain BJD13_03845 b8816d338a079ed60bd4f2475383e2e1 634 PIRSF PIRSF002583 2 634 3.2E-206 T 17-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 BJD13_23940 28a398105649d378548d104897908e61 200 Pfam PF07424 TrbM 27 173 6.5E-47 T 17-10-2018 IPR009989 TrbM BJD13_22920 a2d5b482f248776e2ce83901518a68f8 174 SUPERFAMILY SSF52540 4 169 3.34E-54 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_22920 a2d5b482f248776e2ce83901518a68f8 174 PIRSF PIRSF006135 1 171 3.6E-54 T 17-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 BJD13_22920 a2d5b482f248776e2ce83901518a68f8 174 Gene3D G3DSA:3.40.50.300 3 169 4.0E-57 T 17-10-2018 BJD13_22920 a2d5b482f248776e2ce83901518a68f8 174 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 4 167 2.5E-59 T 17-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 BJD13_16180 dd5066627194350b24805c8d21ca46ea 335 Pfam PF01987 Mitochondrial biogenesis AIM24 74 294 7.8E-65 T 17-10-2018 IPR002838 Mitochondrial biogenesis protein AIM24 BJD13_16180 dd5066627194350b24805c8d21ca46ea 335 TIGRFAM TIGR00266 TIGR00266: TIGR00266 family protein 73 295 1.3E-29 T 17-10-2018 IPR002838 Mitochondrial biogenesis protein AIM24 BJD13_16180 dd5066627194350b24805c8d21ca46ea 335 SUPERFAMILY SSF51219 72 313 5.23E-80 T 17-10-2018 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily BJD13_16180 dd5066627194350b24805c8d21ca46ea 335 Gene3D G3DSA:3.60.160.10 66 320 3.0E-98 T 17-10-2018 IPR036983 Mitochondrial biogenesis AIM24 superfamily BJD13_14055 03a199430cb0f25b393dbc26416534d1 300 Gene3D G3DSA:3.90.226.10 1 237 2.0E-43 T 17-10-2018 BJD13_14055 03a199430cb0f25b393dbc26416534d1 300 TIGRFAM TIGR03133 malonate_beta: biotin-independent malonate decarboxylase, beta subunit 4 273 7.9E-117 T 17-10-2018 IPR017556 Biotin-independent malonate decarboxylase, beta subunit GO:0016831|GO:0044262 MetaCyc: PWY-6060 BJD13_14055 03a199430cb0f25b393dbc26416534d1 300 Pfam PF01039 Carboxyl transferase domain 11 193 1.9E-19 T 17-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 BJD13_14055 03a199430cb0f25b393dbc26416534d1 300 SUPERFAMILY SSF52096 3 228 4.76E-36 T 17-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BJD13_18810 ff56d0fee41331e6c3164a1387d9d41f 337 SUPERFAMILY SSF51197 7 321 4.39E-56 T 17-10-2018 BJD13_18810 ff56d0fee41331e6c3164a1387d9d41f 337 SMART SM00558 100 272 2.3E-5 T 17-10-2018 IPR003347 JmjC domain BJD13_18810 ff56d0fee41331e6c3164a1387d9d41f 337 Gene3D G3DSA:2.60.120.1660 11 276 7.4E-48 T 17-10-2018 BJD13_18810 ff56d0fee41331e6c3164a1387d9d41f 337 Pfam PF13621 Cupin-like domain 24 260 1.0E-55 T 17-10-2018 BJD13_13025 d584c9c98d62bf3680d0da0bc49bfb6b 165 ProDom PD456999 SIGNAL PRECURSOR TRANSMEMBRANE MEMBRANE YOHN INTEGRAL EXPORTED SIMILAR LIPOPROTEIN LIPOPROTEIN 114 162 3.0E-21 T 17-10-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB BJD13_13025 d584c9c98d62bf3680d0da0bc49bfb6b 165 Gene3D G3DSA:3.10.450.160 106 165 4.6E-6 T 17-10-2018 BJD13_13025 d584c9c98d62bf3680d0da0bc49bfb6b 165 Pfam PF11776 Nickel/cobalt transporter regulator 114 160 5.6E-17 T 17-10-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB BJD13_06940 3e342b35a30e9ee20445dfdf46f9de67 281 PRINTS PR00412 Epoxide hydrolase signature 243 265 4.5E-8 T 17-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 BJD13_06940 3e342b35a30e9ee20445dfdf46f9de67 281 PRINTS PR00412 Epoxide hydrolase signature 45 60 4.5E-8 T 17-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 BJD13_06940 3e342b35a30e9ee20445dfdf46f9de67 281 PRINTS PR00412 Epoxide hydrolase signature 104 117 4.5E-8 T 17-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 BJD13_06940 3e342b35a30e9ee20445dfdf46f9de67 281 SUPERFAMILY SSF53474 1 267 1.94E-58 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_06940 3e342b35a30e9ee20445dfdf46f9de67 281 PRINTS PR00111 Alpha/beta hydrolase fold signature 90 103 3.5E-10 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD13_06940 3e342b35a30e9ee20445dfdf46f9de67 281 PRINTS PR00111 Alpha/beta hydrolase fold signature 45 60 3.5E-10 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD13_06940 3e342b35a30e9ee20445dfdf46f9de67 281 PRINTS PR00111 Alpha/beta hydrolase fold signature 213 227 3.5E-10 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD13_06940 3e342b35a30e9ee20445dfdf46f9de67 281 PRINTS PR00111 Alpha/beta hydrolase fold signature 104 117 3.5E-10 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD13_06940 3e342b35a30e9ee20445dfdf46f9de67 281 Gene3D G3DSA:3.40.50.1820 2 271 2.4E-49 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_06940 3e342b35a30e9ee20445dfdf46f9de67 281 Pfam PF00561 alpha/beta hydrolase fold 23 119 5.3E-17 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD13_04395 1d0b51f80d640abedc4aa7ae2ad87038 311 Pfam PF07920 Protein of unknown function (DUF1684) 169 305 5.0E-43 T 17-10-2018 IPR012467 Protein of unknown function DUF1684 BJD13_00920 307202c1e69217f1433b9064e8a03328 137 Gene3D G3DSA:3.40.50.12740 9 136 2.4E-29 T 17-10-2018 BJD13_00920 307202c1e69217f1433b9064e8a03328 137 Pfam PF00072 Response regulator receiver domain 11 123 2.5E-23 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_00920 307202c1e69217f1433b9064e8a03328 137 SUPERFAMILY SSF52172 7 127 6.97E-31 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_00920 307202c1e69217f1433b9064e8a03328 137 SMART SM00448 9 123 2.9E-26 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_15745 7525b0b99985ed5eb1faa12978c92e60 99 TIGRFAM TIGR04509 mod_pep_NH_fam: putative modified peptide 3 91 1.7E-32 T 17-10-2018 IPR030976 Putative modified peptide BJD13_15965 d05e727b26e89c43772bd7825e82f58b 156 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 17 154 3.8E-50 T 17-10-2018 IPR012660 Thioesterase, putative BJD13_15965 d05e727b26e89c43772bd7825e82f58b 156 Gene3D G3DSA:3.10.129.10 7 153 1.3E-39 T 17-10-2018 BJD13_15965 d05e727b26e89c43772bd7825e82f58b 156 SUPERFAMILY SSF54637 11 153 3.39E-29 T 17-10-2018 IPR029069 HotDog domain superfamily BJD13_15965 d05e727b26e89c43772bd7825e82f58b 156 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 20 153 2.1E-36 T 17-10-2018 IPR012660 Thioesterase, putative BJD13_13090 7b08d16907e2638d459f42f5f2319d42 265 Pfam PF00034 Cytochrome c 164 245 7.1E-10 T 17-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_13090 7b08d16907e2638d459f42f5f2319d42 265 Pfam PF00034 Cytochrome c 56 132 2.7E-7 T 17-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_13090 7b08d16907e2638d459f42f5f2319d42 265 SUPERFAMILY SSF46626 149 247 2.87E-19 T 17-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BJD13_13090 7b08d16907e2638d459f42f5f2319d42 265 SUPERFAMILY SSF46626 61 133 5.82E-18 T 17-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BJD13_13090 7b08d16907e2638d459f42f5f2319d42 265 Gene3D G3DSA:1.10.760.10 148 246 1.8E-25 T 17-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BJD13_13090 7b08d16907e2638d459f42f5f2319d42 265 PIRSF PIRSF000005 2 247 4.5E-63 T 17-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 BJD13_13090 7b08d16907e2638d459f42f5f2319d42 265 Gene3D G3DSA:1.10.760.10 50 135 3.8E-23 T 17-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BJD13_13155 976c60f8c4ec315d01d3bcc8834bebf1 355 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 15 25 5.5E-5 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD13_13155 976c60f8c4ec315d01d3bcc8834bebf1 355 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 5 15 5.5E-5 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD13_13155 976c60f8c4ec315d01d3bcc8834bebf1 355 Gene3D G3DSA:3.40.50.2300 57 311 6.2E-66 T 17-10-2018 BJD13_13155 976c60f8c4ec315d01d3bcc8834bebf1 355 SMART SM00354 3 73 3.6E-25 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD13_13155 976c60f8c4ec315d01d3bcc8834bebf1 355 SUPERFAMILY SSF47413 2 59 4.57E-17 T 17-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BJD13_13155 976c60f8c4ec315d01d3bcc8834bebf1 355 Pfam PF13377 Periplasmic binding protein-like domain 173 339 1.5E-34 T 17-10-2018 BJD13_13155 976c60f8c4ec315d01d3bcc8834bebf1 355 SUPERFAMILY SSF53822 64 344 2.02E-63 T 17-10-2018 IPR028082 Periplasmic binding protein-like I BJD13_13155 976c60f8c4ec315d01d3bcc8834bebf1 355 Gene3D G3DSA:3.40.50.2300 165 294 6.2E-66 T 17-10-2018 BJD13_13155 976c60f8c4ec315d01d3bcc8834bebf1 355 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 50 4.3E-18 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD13_13155 976c60f8c4ec315d01d3bcc8834bebf1 355 Gene3D G3DSA:1.10.260.40 1 56 1.6E-22 T 17-10-2018 BJD13_13155 976c60f8c4ec315d01d3bcc8834bebf1 355 ProSitePatterns PS00356 LacI-type HTH domain signature. 6 24 - T 17-10-2018 BJD13_21425 cd8397380b615a46208a4542534675f8 575 Gene3D G3DSA:3.30.450.90 165 297 4.2E-50 T 17-10-2018 BJD13_21425 cd8397380b615a46208a4542534675f8 575 Pfam PF00437 Type II/IV secretion system protein 200 464 2.3E-87 T 17-10-2018 IPR001482 Type II/IV secretion system protein BJD13_21425 cd8397380b615a46208a4542534675f8 575 SUPERFAMILY SSF160246 14 157 3.66E-32 T 17-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily BJD13_21425 cd8397380b615a46208a4542534675f8 575 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 92 572 2.0E-209 T 17-10-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 BJD13_21425 cd8397380b615a46208a4542534675f8 575 Gene3D G3DSA:3.40.50.300 300 574 1.0E-103 T 17-10-2018 BJD13_21425 cd8397380b615a46208a4542534675f8 575 SUPERFAMILY SSF52540 182 572 5.57E-94 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_21425 cd8397380b615a46208a4542534675f8 575 Gene3D G3DSA:1.10.40.70 9 71 2.0E-32 T 17-10-2018 BJD13_21425 cd8397380b615a46208a4542534675f8 575 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 53 161 9.5E-14 T 17-10-2018 IPR007831 General secretory system II, protein E, N-terminal BJD13_21425 cd8397380b615a46208a4542534675f8 575 SMART SM00382 325 446 7.5E-6 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_21425 cd8397380b615a46208a4542534675f8 575 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 392 406 - T 17-10-2018 IPR001482 Type II/IV secretion system protein BJD13_21425 cd8397380b615a46208a4542534675f8 575 Gene3D G3DSA:3.30.300.160 72 157 3.2E-35 T 17-10-2018 BJD13_07480 50f10f1cc3391b6fd05d84e7064485e7 355 SUPERFAMILY SSF48403 11 293 5.14E-23 T 17-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily BJD13_07480 50f10f1cc3391b6fd05d84e7064485e7 355 SMART SM00248 179 206 880.0 T 17-10-2018 IPR002110 Ankyrin repeat GO:0005515 BJD13_07480 50f10f1cc3391b6fd05d84e7064485e7 355 SMART SM00248 89 117 160.0 T 17-10-2018 IPR002110 Ankyrin repeat GO:0005515 BJD13_07480 50f10f1cc3391b6fd05d84e7064485e7 355 SMART SM00248 241 270 750.0 T 17-10-2018 IPR002110 Ankyrin repeat GO:0005515 BJD13_07480 50f10f1cc3391b6fd05d84e7064485e7 355 SMART SM00248 118 146 740.0 T 17-10-2018 IPR002110 Ankyrin repeat GO:0005515 BJD13_07480 50f10f1cc3391b6fd05d84e7064485e7 355 SMART SM00248 147 176 52.0 T 17-10-2018 IPR002110 Ankyrin repeat GO:0005515 BJD13_07480 50f10f1cc3391b6fd05d84e7064485e7 355 Gene3D G3DSA:1.25.40.20 2 350 7.4E-29 T 17-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily BJD13_07480 50f10f1cc3391b6fd05d84e7064485e7 355 Pfam PF12796 Ankyrin repeats (3 copies) 123 200 3.7E-7 T 17-10-2018 IPR020683 Ankyrin repeat-containing domain BJD13_07480 50f10f1cc3391b6fd05d84e7064485e7 355 Pfam PF12796 Ankyrin repeats (3 copies) 214 292 6.9E-8 T 17-10-2018 IPR020683 Ankyrin repeat-containing domain BJD13_07480 50f10f1cc3391b6fd05d84e7064485e7 355 Pfam PF12796 Ankyrin repeats (3 copies) 42 114 7.0E-7 T 17-10-2018 IPR020683 Ankyrin repeat-containing domain BJD13_17185 d64202681a22f1ce25adde1fb5021ed6 185 SUPERFAMILY SSF55729 25 164 4.63E-24 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD13_17185 d64202681a22f1ce25adde1fb5021ed6 185 Gene3D G3DSA:3.40.630.30 23 185 2.7E-24 T 17-10-2018 BJD13_17185 d64202681a22f1ce25adde1fb5021ed6 185 Pfam PF13673 Acetyltransferase (GNAT) domain 69 172 3.4E-11 T 17-10-2018 IPR000182 GNAT domain BJD13_19540 d93b204e2941884218cf6ec41ecd8266 240 Pfam PF02104 SURF1 family 16 220 1.5E-24 T 17-10-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_18210 52ec81e8b936b1870395d2a84fc2cc72 423 Gene3D G3DSA:2.40.420.20 168 179 2.0E-9 T 17-10-2018 BJD13_18210 52ec81e8b936b1870395d2a84fc2cc72 423 Gene3D G3DSA:2.40.420.20 346 403 1.2E-35 T 17-10-2018 BJD13_18210 52ec81e8b936b1870395d2a84fc2cc72 423 Gene3D G3DSA:2.40.50.100 232 265 1.2E-35 T 17-10-2018 BJD13_18210 52ec81e8b936b1870395d2a84fc2cc72 423 Gene3D G3DSA:2.40.50.100 194 227 2.0E-9 T 17-10-2018 BJD13_18210 52ec81e8b936b1870395d2a84fc2cc72 423 SUPERFAMILY SSF51230 196 265 2.62E-13 T 17-10-2018 IPR011053 Single hybrid motif BJD13_18210 52ec81e8b936b1870395d2a84fc2cc72 423 Gene3D G3DSA:2.40.30.170 266 345 1.2E-35 T 17-10-2018 BJD13_18210 52ec81e8b936b1870395d2a84fc2cc72 423 Gene3D G3DSA:2.40.30.170 180 193 2.0E-9 T 17-10-2018 BJD13_18210 52ec81e8b936b1870395d2a84fc2cc72 423 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 233 336 9.1E-18 T 17-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BJD13_18975 08b0ec33a6ca596c07c88bdc3eb930cf 242 SUPERFAMILY SSF53067 5 110 2.85E-20 T 17-10-2018 BJD13_18975 08b0ec33a6ca596c07c88bdc3eb930cf 242 Gene3D G3DSA:3.30.420.490 114 228 7.2E-54 T 17-10-2018 BJD13_18975 08b0ec33a6ca596c07c88bdc3eb930cf 242 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 6 234 4.1E-20 T 17-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 BJD13_18975 08b0ec33a6ca596c07c88bdc3eb930cf 242 SUPERFAMILY SSF53067 113 236 1.55E-22 T 17-10-2018 BJD13_18975 08b0ec33a6ca596c07c88bdc3eb930cf 242 Gene3D G3DSA:3.30.420.40 5 233 7.2E-54 T 17-10-2018 BJD13_18975 08b0ec33a6ca596c07c88bdc3eb930cf 242 Hamap MF_01274 Type III pantothenate kinase [coaX]. 2 240 14.315 T 17-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 BJD13_18975 08b0ec33a6ca596c07c88bdc3eb930cf 242 Pfam PF03309 Type III pantothenate kinase 5 192 8.2E-36 T 17-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 BJD13_22585 7ff6f8965a3d40eba968538ed98af9be 143 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 134 23.144 T 17-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 BJD13_22585 7ff6f8965a3d40eba968538ed98af9be 143 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 17-10-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site BJD13_22585 7ff6f8965a3d40eba968538ed98af9be 143 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 3 133 2.8E-44 T 17-10-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L BJD13_22585 7ff6f8965a3d40eba968538ed98af9be 143 Gene3D G3DSA:1.10.1200.120 3 136 7.7E-42 T 17-10-2018 IPR036019 Gated mechanosensitive channel BJD13_22585 7ff6f8965a3d40eba968538ed98af9be 143 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 134 2.6E-40 T 17-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 BJD13_22585 7ff6f8965a3d40eba968538ed98af9be 143 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 89 97 2.9E-13 T 17-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 BJD13_22585 7ff6f8965a3d40eba968538ed98af9be 143 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 98 107 2.9E-13 T 17-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 BJD13_22585 7ff6f8965a3d40eba968538ed98af9be 143 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 2.9E-13 T 17-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 BJD13_22585 7ff6f8965a3d40eba968538ed98af9be 143 SUPERFAMILY SSF81330 12 129 5.23E-36 T 17-10-2018 IPR036019 Gated mechanosensitive channel BJD13_00885 2ae7261d96d6d28d74a9c19ba3ec6a66 594 Gene3D G3DSA:3.30.565.10 48 140 1.2E-6 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_00885 2ae7261d96d6d28d74a9c19ba3ec6a66 594 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 51 124 8.0E-7 T 17-10-2018 BJD13_00885 2ae7261d96d6d28d74a9c19ba3ec6a66 594 SUPERFAMILY SSF55874 52 129 3.42E-9 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_03235 3caf9a151b288d360b16591c6b277b1c 704 Pfam PF00575 S1 RNA binding domain 620 691 1.5E-20 T 17-10-2018 IPR003029 S1 domain GO:0003676 BJD13_03235 3caf9a151b288d360b16591c6b277b1c 704 SUPERFAMILY SSF55666 451 550 9.96E-29 T 17-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BJD13_03235 3caf9a151b288d360b16591c6b277b1c 704 Gene3D G3DSA:3.30.230.70 1 229 3.7E-78 T 17-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BJD13_03235 3caf9a151b288d360b16591c6b277b1c 704 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 243 320 3.0E-12 T 17-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 BJD13_03235 3caf9a151b288d360b16591c6b277b1c 704 SUPERFAMILY SSF54211 4 143 2.48E-48 T 17-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BJD13_03235 3caf9a151b288d360b16591c6b277b1c 704 SMART SM00316 621 691 4.9E-26 T 17-10-2018 IPR022967 RNA-binding domain, S1 BJD13_03235 3caf9a151b288d360b16591c6b277b1c 704 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 9 693 0.0 T 17-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 BJD13_03235 3caf9a151b288d360b16591c6b277b1c 704 Gene3D G3DSA:3.30.230.70 231 550 3.6E-115 T 17-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BJD13_03235 3caf9a151b288d360b16591c6b277b1c 704 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 2 694 30.413 T 17-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 BJD13_03235 3caf9a151b288d360b16591c6b277b1c 704 SUPERFAMILY SSF50249 609 695 2.91E-22 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD13_03235 3caf9a151b288d360b16591c6b277b1c 704 SUPERFAMILY SSF46915 225 327 5.75E-18 T 17-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 BJD13_03235 3caf9a151b288d360b16591c6b277b1c 704 SMART SM00322 553 618 3.8E-12 T 17-10-2018 IPR004087 K Homology domain GO:0003676 BJD13_03235 3caf9a151b288d360b16591c6b277b1c 704 Pfam PF01138 3' exoribonuclease family, domain 1 325 457 2.9E-21 T 17-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BJD13_03235 3caf9a151b288d360b16591c6b277b1c 704 Pfam PF01138 3' exoribonuclease family, domain 1 15 143 5.2E-18 T 17-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BJD13_03235 3caf9a151b288d360b16591c6b277b1c 704 Pfam PF00013 KH domain 558 614 8.2E-10 T 17-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 BJD13_03235 3caf9a151b288d360b16591c6b277b1c 704 PIRSF PIRSF005499 1 704 2.3E-293 T 17-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 BJD13_03235 3caf9a151b288d360b16591c6b277b1c 704 SUPERFAMILY SSF54211 305 493 2.58E-47 T 17-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BJD13_03235 3caf9a151b288d360b16591c6b277b1c 704 SUPERFAMILY SSF54791 553 630 2.43E-17 T 17-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 BJD13_03235 3caf9a151b288d360b16591c6b277b1c 704 Gene3D G3DSA:3.30.1370.10 551 622 1.5E-19 T 17-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 BJD13_03235 3caf9a151b288d360b16591c6b277b1c 704 SUPERFAMILY SSF55666 144 234 1.23E-27 T 17-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BJD13_03235 3caf9a151b288d360b16591c6b277b1c 704 Gene3D G3DSA:2.40.50.140 623 695 7.3E-29 T 17-10-2018 BJD13_03235 3caf9a151b288d360b16591c6b277b1c 704 Pfam PF03725 3' exoribonuclease family, domain 2 460 529 8.9E-7 T 17-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BJD13_03235 3caf9a151b288d360b16591c6b277b1c 704 Pfam PF03725 3' exoribonuclease family, domain 2 146 209 9.2E-11 T 17-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BJD13_22015 1f979ff9f56c26aa20ae55f87c06e915 205 SUPERFAMILY SSF56784 9 196 8.08E-26 T 17-10-2018 IPR036412 HAD-like superfamily BJD13_22015 1f979ff9f56c26aa20ae55f87c06e915 205 Gene3D G3DSA:3.40.50.1000 11 186 2.8E-26 T 17-10-2018 IPR023214 HAD superfamily BJD13_22015 1f979ff9f56c26aa20ae55f87c06e915 205 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 141 186 8.9E-10 T 17-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BJD13_22015 1f979ff9f56c26aa20ae55f87c06e915 205 Gene3D G3DSA:1.10.150.240 22 87 2.8E-26 T 17-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BJD13_16165 70e93f2ee70effb1fcca8ce7b422b0eb 131 ProSitePatterns PS00018 EF-hand calcium-binding domain. 114 126 - T 17-10-2018 IPR018247 EF-Hand 1, calcium-binding site BJD13_16165 70e93f2ee70effb1fcca8ce7b422b0eb 131 Gene3D G3DSA:1.10.238.10 23 73 4.0E-6 T 17-10-2018 BJD13_16165 70e93f2ee70effb1fcca8ce7b422b0eb 131 ProSitePatterns PS00018 EF-hand calcium-binding domain. 53 65 - T 17-10-2018 IPR018247 EF-Hand 1, calcium-binding site BJD13_16165 70e93f2ee70effb1fcca8ce7b422b0eb 131 Gene3D G3DSA:1.10.238.10 74 129 5.7E-7 T 17-10-2018 BJD13_16165 70e93f2ee70effb1fcca8ce7b422b0eb 131 SUPERFAMILY SSF47473 45 128 2.4E-13 T 17-10-2018 IPR011992 EF-hand domain pair BJD13_16165 70e93f2ee70effb1fcca8ce7b422b0eb 131 Pfam PF13202 EF hand 110 126 0.024 T 17-10-2018 IPR002048 EF-hand domain GO:0005509 BJD13_16165 70e93f2ee70effb1fcca8ce7b422b0eb 131 Pfam PF13202 EF hand 47 65 8.7E-5 T 17-10-2018 IPR002048 EF-hand domain GO:0005509 BJD13_16080 29665244974c31fee0b749f0c5eb3cd8 267 SMART SM00563 90 202 5.1E-25 T 17-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 BJD13_16080 29665244974c31fee0b749f0c5eb3cd8 267 Pfam PF01553 Acyltransferase 89 199 8.7E-21 T 17-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 BJD13_16080 29665244974c31fee0b749f0c5eb3cd8 267 SUPERFAMILY SSF69593 25 216 3.92E-22 T 17-10-2018 BJD13_19990 5f9d4bcdb1931f5736b18d67d2a7f258 146 SUPERFAMILY SSF69500 1 144 7.85E-51 T 17-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily BJD13_19990 5f9d4bcdb1931f5736b18d67d2a7f258 146 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 146 33.465 T 17-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 BJD13_19990 5f9d4bcdb1931f5736b18d67d2a7f258 146 Gene3D G3DSA:3.50.80.10 1 145 1.9E-51 T 17-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily BJD13_19990 5f9d4bcdb1931f5736b18d67d2a7f258 146 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 144 2.6E-49 T 17-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 BJD13_19990 5f9d4bcdb1931f5736b18d67d2a7f258 146 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 144 3.9E-51 T 17-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 BJD13_16075 d81de5ac472df3f242097d19bd2a8dd4 329 SUPERFAMILY SSF53474 41 321 1.35E-36 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_16075 d81de5ac472df3f242097d19bd2a8dd4 329 PIRSF PIRSF005211 1 329 1.1E-74 T 17-10-2018 IPR012020 AB hydrolase 4 family BJD13_16075 d81de5ac472df3f242097d19bd2a8dd4 329 Pfam PF12146 Serine aminopeptidase, S33 67 282 1.1E-12 T 17-10-2018 IPR022742 Serine aminopeptidase, S33 BJD13_04530 dea0ddabc3a2aa9c538e7d2740af1928 445 SUPERFAMILY SSF51556 68 367 8.08E-96 T 17-10-2018 IPR032466 Metal-dependent hydrolase BJD13_04530 dea0ddabc3a2aa9c538e7d2740af1928 445 Gene3D G3DSA:3.20.20.140 69 359 1.1E-170 T 17-10-2018 BJD13_04530 dea0ddabc3a2aa9c538e7d2740af1928 445 Pfam PF01979 Amidohydrolase family 66 413 4.6E-66 T 17-10-2018 IPR006680 Amidohydrolase-related GO:0016787 BJD13_04530 dea0ddabc3a2aa9c538e7d2740af1928 445 SUPERFAMILY SSF51338 10 440 4.32E-25 T 17-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BJD13_04530 dea0ddabc3a2aa9c538e7d2740af1928 445 Gene3D G3DSA:2.30.40.10 12 433 1.1E-170 T 17-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BJD13_11650 6df17214e67fdb7fc8090a18b8f9513f 340 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 1 339 58.294 T 17-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 BJD13_11650 6df17214e67fdb7fc8090a18b8f9513f 340 Gene3D G3DSA:3.90.180.10 21 327 1.3E-110 T 17-10-2018 BJD13_11650 6df17214e67fdb7fc8090a18b8f9513f 340 SMART SM00829 12 337 4.0E-4 T 17-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 BJD13_11650 6df17214e67fdb7fc8090a18b8f9513f 340 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 17-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 BJD13_11650 6df17214e67fdb7fc8090a18b8f9513f 340 SUPERFAMILY SSF51735 141 304 3.23E-34 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_11650 6df17214e67fdb7fc8090a18b8f9513f 340 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 3 339 2.4E-146 T 17-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 BJD13_11650 6df17214e67fdb7fc8090a18b8f9513f 340 Gene3D G3DSA:3.40.50.720 153 285 1.3E-110 T 17-10-2018 BJD13_11650 6df17214e67fdb7fc8090a18b8f9513f 340 SUPERFAMILY SSF50129 1 173 8.07E-57 T 17-10-2018 IPR011032 GroES-like superfamily BJD13_11650 6df17214e67fdb7fc8090a18b8f9513f 340 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 135 9.8E-34 T 17-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 BJD13_11650 6df17214e67fdb7fc8090a18b8f9513f 340 Pfam PF00107 Zinc-binding dehydrogenase 174 301 7.1E-29 T 17-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 BJD13_15105 f41d4248bff4276e377b0d25c87d9f49 187 Pfam PF00775 Dioxygenase 30 156 4.5E-20 T 17-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 BJD13_15105 f41d4248bff4276e377b0d25c87d9f49 187 SUPERFAMILY SSF49482 3 186 8.5E-56 T 17-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 BJD13_15105 f41d4248bff4276e377b0d25c87d9f49 187 TIGRFAM TIGR02423 protocat_alph: protocatechuate 3,4-dioxygenase, alpha subunit 6 187 9.5E-74 T 17-10-2018 IPR012786 Protocatechuate 3,4-dioxygenase, alpha subunit GO:0005506|GO:0018578|GO:0019439|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|MetaCyc: PWY-6041 BJD13_15105 f41d4248bff4276e377b0d25c87d9f49 187 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 39 67 - T 17-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 BJD13_15105 f41d4248bff4276e377b0d25c87d9f49 187 Gene3D G3DSA:2.60.130.10 1 186 5.9E-64 T 17-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 BJD13_08355 fa2a5645a77a168504a892a3ef50bdbe 322 Gene3D G3DSA:3.90.420.10 57 322 1.4E-105 T 17-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 BJD13_08355 fa2a5645a77a168504a892a3ef50bdbe 322 Pfam PF00174 Oxidoreductase molybdopterin binding domain 99 254 5.5E-33 T 17-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 BJD13_08355 fa2a5645a77a168504a892a3ef50bdbe 322 SUPERFAMILY SSF56524 67 318 5.89E-91 T 17-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 BJD13_08355 fa2a5645a77a168504a892a3ef50bdbe 322 Hamap MF_01206 Protein-methionine-sulfoxide reductase catalytic subunit MsrP [msrP]. 7 322 53.982 T 17-10-2018 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 BJD13_21295 692711a410ffd0ef966225b5434a43c4 564 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 6.8E-16 T 17-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 BJD13_21295 692711a410ffd0ef966225b5434a43c4 564 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 6.8E-16 T 17-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 BJD13_21295 692711a410ffd0ef966225b5434a43c4 564 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 6.8E-16 T 17-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 BJD13_21295 692711a410ffd0ef966225b5434a43c4 564 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 6.8E-16 T 17-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 BJD13_21295 692711a410ffd0ef966225b5434a43c4 564 Pfam PF04073 Aminoacyl-tRNA editing domain 256 375 2.1E-30 T 17-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 BJD13_21295 692711a410ffd0ef966225b5434a43c4 564 SUPERFAMILY SSF55681 10 474 1.81E-100 T 17-10-2018 BJD13_21295 692711a410ffd0ef966225b5434a43c4 564 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 563 39.269 T 17-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 BJD13_21295 692711a410ffd0ef966225b5434a43c4 564 SUPERFAMILY SSF55826 219 386 4.97E-34 T 17-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 BJD13_21295 692711a410ffd0ef966225b5434a43c4 564 Gene3D G3DSA:3.40.50.800 4 548 6.6E-223 T 17-10-2018 IPR036621 Anticodon-binding domain superfamily BJD13_21295 692711a410ffd0ef966225b5434a43c4 564 Gene3D G3DSA:3.30.930.10 11 461 6.6E-223 T 17-10-2018 BJD13_21295 692711a410ffd0ef966225b5434a43c4 564 Pfam PF03129 Anticodon binding domain 471 559 3.3E-13 T 17-10-2018 IPR004154 Anticodon-binding BJD13_21295 692711a410ffd0ef966225b5434a43c4 564 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 455 4.3E-44 T 17-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD13_21295 692711a410ffd0ef966225b5434a43c4 564 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 559 1.9E-212 T 17-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 BJD13_21295 692711a410ffd0ef966225b5434a43c4 564 Gene3D G3DSA:3.90.960.10 240 386 6.6E-223 T 17-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 BJD13_21295 692711a410ffd0ef966225b5434a43c4 564 SUPERFAMILY SSF52954 460 562 1.03E-23 T 17-10-2018 BJD13_08165 5fb401c933505466c773eda2fe8c1498 317 Gene3D G3DSA:2.115.10.20 2 151 3.3E-6 T 17-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily BJD13_08165 5fb401c933505466c773eda2fe8c1498 317 SUPERFAMILY SSF75005 68 302 1.22E-23 T 17-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily BJD13_08165 5fb401c933505466c773eda2fe8c1498 317 Gene3D G3DSA:2.115.10.20 152 312 5.0E-16 T 17-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily BJD13_03950 f4b5e2b1a02168b658970ff559365e48 322 SUPERFAMILY SSF82866 77 297 4.97E-35 T 17-10-2018 BJD13_03950 f4b5e2b1a02168b658970ff559365e48 322 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 15 303 26.146 T 17-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 BJD13_03950 f4b5e2b1a02168b658970ff559365e48 322 Pfam PF02355 Protein export membrane protein 127 296 1.4E-47 T 17-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial BJD13_03950 f4b5e2b1a02168b658970ff559365e48 322 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 43 292 6.1E-63 T 17-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 BJD13_03950 f4b5e2b1a02168b658970ff559365e48 322 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 80 289 1.7E-45 T 17-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BJD13_03950 f4b5e2b1a02168b658970ff559365e48 322 Pfam PF07549 SecD/SecF GG Motif 38 64 1.7E-7 T 17-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site BJD13_03950 f4b5e2b1a02168b658970ff559365e48 322 Gene3D G3DSA:1.20.1640.10 141 306 4.7E-10 T 17-10-2018 BJD13_03950 f4b5e2b1a02168b658970ff559365e48 322 PRINTS PR01755 Bacterial translocase SecF protein signature 240 255 2.3E-27 T 17-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BJD13_03950 f4b5e2b1a02168b658970ff559365e48 322 PRINTS PR01755 Bacterial translocase SecF protein signature 161 175 2.3E-27 T 17-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BJD13_03950 f4b5e2b1a02168b658970ff559365e48 322 PRINTS PR01755 Bacterial translocase SecF protein signature 209 227 2.3E-27 T 17-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BJD13_03950 f4b5e2b1a02168b658970ff559365e48 322 PRINTS PR01755 Bacterial translocase SecF protein signature 42 57 2.3E-27 T 17-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BJD13_23960 20398ab6b4d80f011e3c877476f3aa00 895 SUPERFAMILY SSF54736 276 341 2.44E-10 T 17-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like BJD13_23960 20398ab6b4d80f011e3c877476f3aa00 895 SUPERFAMILY SSF52540 80 612 2.23E-51 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_23960 20398ab6b4d80f011e3c877476f3aa00 895 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 279 343 9.0E-5 T 17-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_23960 20398ab6b4d80f011e3c877476f3aa00 895 Gene3D G3DSA:3.30.1390.10 273 342 5.4E-7 T 17-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like BJD13_23960 20398ab6b4d80f011e3c877476f3aa00 895 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 88 240 7.0E-37 T 17-10-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 BJD13_23960 20398ab6b4d80f011e3c877476f3aa00 895 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 365 617 2.3E-61 T 17-10-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 BJD13_23960 20398ab6b4d80f011e3c877476f3aa00 895 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 278 341 4.8E-7 T 17-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_23960 20398ab6b4d80f011e3c877476f3aa00 895 Gene3D G3DSA:3.40.50.300 378 609 4.1E-36 T 17-10-2018 BJD13_03850 1cde39232721059c0b5510dfa0e43df2 207 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 13 192 5.7E-43 T 17-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 BJD13_03850 1cde39232721059c0b5510dfa0e43df2 207 Pfam PF03602 Conserved hypothetical protein 95 16 191 2.5E-51 T 17-10-2018 BJD13_03850 1cde39232721059c0b5510dfa0e43df2 207 SUPERFAMILY SSF53335 15 192 9.33E-44 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_03850 1cde39232721059c0b5510dfa0e43df2 207 PIRSF PIRSF004553 15 194 1.7E-43 T 17-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 BJD13_03850 1cde39232721059c0b5510dfa0e43df2 207 Gene3D G3DSA:3.40.50.150 6 200 1.8E-53 T 17-10-2018 BJD13_05905 a74a4b02911e627c1f295b249c253d13 128 Pfam PF13676 TIR domain 14 59 2.4E-7 T 17-10-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 BJD13_05905 a74a4b02911e627c1f295b249c253d13 128 Gene3D G3DSA:3.40.50.10140 9 75 1.8E-5 T 17-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily BJD13_06935 94c60bd92419a11e805885358fa5c697 762 SUPERFAMILY SSF55073 340 497 1.65E-46 T 17-10-2018 IPR029787 Nucleotide cyclase BJD13_06935 94c60bd92419a11e805885358fa5c697 762 SMART SM00091 47 114 6.6E-7 T 17-10-2018 IPR000014 PAS domain BJD13_06935 94c60bd92419a11e805885358fa5c697 762 Gene3D G3DSA:3.30.450.40 185 331 4.0E-23 T 17-10-2018 IPR029016 GAF-like domain superfamily BJD13_06935 94c60bd92419a11e805885358fa5c697 762 Gene3D G3DSA:3.20.20.450 509 760 8.3E-95 T 17-10-2018 IPR035919 EAL domain superfamily BJD13_06935 94c60bd92419a11e805885358fa5c697 762 SMART SM00267 324 495 5.2E-59 T 17-10-2018 IPR000160 GGDEF domain BJD13_06935 94c60bd92419a11e805885358fa5c697 762 Pfam PF00563 EAL domain 511 747 1.3E-71 T 17-10-2018 IPR001633 EAL domain BJD13_06935 94c60bd92419a11e805885358fa5c697 762 SMART SM00086 120 162 8.6E-6 T 17-10-2018 IPR001610 PAC motif BJD13_06935 94c60bd92419a11e805885358fa5c697 762 Pfam PF13185 GAF domain 180 322 2.9E-10 T 17-10-2018 IPR003018 GAF domain GO:0005515 BJD13_06935 94c60bd92419a11e805885358fa5c697 762 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 45 166 9.7E-19 T 17-10-2018 IPR000014 PAS domain BJD13_06935 94c60bd92419a11e805885358fa5c697 762 Pfam PF00990 Diguanylate cyclase, GGDEF domain 335 490 3.5E-42 T 17-10-2018 IPR000160 GGDEF domain BJD13_06935 94c60bd92419a11e805885358fa5c697 762 Pfam PF13426 PAS domain 58 161 5.8E-17 T 17-10-2018 IPR000014 PAS domain BJD13_06935 94c60bd92419a11e805885358fa5c697 762 SUPERFAMILY SSF55781 184 335 7.2E-22 T 17-10-2018 BJD13_06935 94c60bd92419a11e805885358fa5c697 762 SUPERFAMILY SSF141868 511 758 9.02E-83 T 17-10-2018 IPR035919 EAL domain superfamily BJD13_06935 94c60bd92419a11e805885358fa5c697 762 PIRSF PIRSF005925 36 762 0.0 T 17-10-2018 IPR012226 Diguanylate cyclase/phosphodiesterase BJD13_06935 94c60bd92419a11e805885358fa5c697 762 SMART SM00065 164 332 4.7E-5 T 17-10-2018 IPR003018 GAF domain GO:0005515 BJD13_06935 94c60bd92419a11e805885358fa5c697 762 Gene3D G3DSA:3.30.70.270 332 508 2.2E-53 T 17-10-2018 BJD13_06935 94c60bd92419a11e805885358fa5c697 762 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 333 492 1.6E-35 T 17-10-2018 IPR000160 GGDEF domain BJD13_06935 94c60bd92419a11e805885358fa5c697 762 SUPERFAMILY SSF55785 53 160 9.83E-22 T 17-10-2018 IPR035965 PAS domain superfamily BJD13_06935 94c60bd92419a11e805885358fa5c697 762 Gene3D G3DSA:3.30.450.20 42 184 4.3E-32 T 17-10-2018 BJD13_06935 94c60bd92419a11e805885358fa5c697 762 SMART SM00052 505 752 3.6E-108 T 17-10-2018 IPR001633 EAL domain BJD13_13165 4ce32f36b628a0a8c563b4d60dc8a344 240 Gene3D G3DSA:1.10.10.10 3 78 9.8E-26 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_13165 4ce32f36b628a0a8c563b4d60dc8a344 240 Pfam PF07702 UTRA domain 99 232 2.1E-32 T 17-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 BJD13_13165 4ce32f36b628a0a8c563b4d60dc8a344 240 SUPERFAMILY SSF64288 65 240 4.24E-42 T 17-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily BJD13_13165 4ce32f36b628a0a8c563b4d60dc8a344 240 SUPERFAMILY SSF46785 8 79 4.92E-22 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_13165 4ce32f36b628a0a8c563b4d60dc8a344 240 Gene3D G3DSA:3.40.1410.10 80 240 2.5E-35 T 17-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily BJD13_13165 4ce32f36b628a0a8c563b4d60dc8a344 240 SMART SM00866 97 233 2.1E-27 T 17-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 BJD13_13165 4ce32f36b628a0a8c563b4d60dc8a344 240 SMART SM00345 18 77 6.6E-20 T 17-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD13_13165 4ce32f36b628a0a8c563b4d60dc8a344 240 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 77 1.8E-19 T 17-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD13_13165 4ce32f36b628a0a8c563b4d60dc8a344 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 1.2E-9 T 17-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD13_13165 4ce32f36b628a0a8c563b4d60dc8a344 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 1.2E-9 T 17-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD13_08590 036b6f7b8c69cbb30a939b1f19bf10c7 423 SUPERFAMILY SSF53383 7 419 2.2E-74 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD13_08590 036b6f7b8c69cbb30a939b1f19bf10c7 423 Pfam PF00266 Aminotransferase class-V 75 360 3.9E-10 T 17-10-2018 IPR000192 Aminotransferase class V domain BJD13_08590 036b6f7b8c69cbb30a939b1f19bf10c7 423 Hamap MF_01970 Kynureninase [kynU]. 1 421 45.605 T 17-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 BJD13_08590 036b6f7b8c69cbb30a939b1f19bf10c7 423 Gene3D G3DSA:3.40.640.10 48 320 7.4E-157 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD13_08590 036b6f7b8c69cbb30a939b1f19bf10c7 423 TIGRFAM TIGR01814 kynureninase: kynureninase 11 421 1.0E-157 T 17-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 BJD13_08590 036b6f7b8c69cbb30a939b1f19bf10c7 423 Gene3D G3DSA:3.90.1150.10 10 415 7.4E-157 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD13_08590 036b6f7b8c69cbb30a939b1f19bf10c7 423 PIRSF PIRSF038800 2 422 9.8E-157 T 17-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 BJD13_20510 d57f1017d704b45de0a5b0a14ee58e59 126 SUPERFAMILY SSF52172 8 122 8.68E-16 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_20510 d57f1017d704b45de0a5b0a14ee58e59 126 Pfam PF00072 Response regulator receiver domain 11 91 1.7E-5 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_20510 d57f1017d704b45de0a5b0a14ee58e59 126 SMART SM00448 9 117 1.6E-5 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_20510 d57f1017d704b45de0a5b0a14ee58e59 126 Gene3D G3DSA:3.40.50.2300 7 126 7.1E-34 T 17-10-2018 BJD13_23120 ea366f092f311c89440c66e8009d25b9 199 Pfam PF12697 Alpha/beta hydrolase family 1 168 3.2E-6 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD13_23120 ea366f092f311c89440c66e8009d25b9 199 SUPERFAMILY SSF53474 1 197 2.48E-18 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_07205 18096d8ae9a44f2de74d4e47338e2bfc 431 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 4 427 40.863 T 17-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BJD13_07205 18096d8ae9a44f2de74d4e47338e2bfc 431 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 426 9.2E-161 T 17-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BJD13_07205 18096d8ae9a44f2de74d4e47338e2bfc 431 Gene3D G3DSA:3.40.50.1980 31 232 1.2E-120 T 17-10-2018 BJD13_07205 18096d8ae9a44f2de74d4e47338e2bfc 431 PIRSF PIRSF000099 1 429 1.0E-160 T 17-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BJD13_07205 18096d8ae9a44f2de74d4e47338e2bfc 431 PRINTS PR00083 Histidinol dehydrogenase signature 361 379 7.0E-94 T 17-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BJD13_07205 18096d8ae9a44f2de74d4e47338e2bfc 431 PRINTS PR00083 Histidinol dehydrogenase signature 169 195 7.0E-94 T 17-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BJD13_07205 18096d8ae9a44f2de74d4e47338e2bfc 431 PRINTS PR00083 Histidinol dehydrogenase signature 199 224 7.0E-94 T 17-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BJD13_07205 18096d8ae9a44f2de74d4e47338e2bfc 431 PRINTS PR00083 Histidinol dehydrogenase signature 252 271 7.0E-94 T 17-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BJD13_07205 18096d8ae9a44f2de74d4e47338e2bfc 431 PRINTS PR00083 Histidinol dehydrogenase signature 320 345 7.0E-94 T 17-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BJD13_07205 18096d8ae9a44f2de74d4e47338e2bfc 431 PRINTS PR00083 Histidinol dehydrogenase signature 134 160 7.0E-94 T 17-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BJD13_07205 18096d8ae9a44f2de74d4e47338e2bfc 431 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 7.0E-94 T 17-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BJD13_07205 18096d8ae9a44f2de74d4e47338e2bfc 431 PRINTS PR00083 Histidinol dehydrogenase signature 230 251 7.0E-94 T 17-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BJD13_07205 18096d8ae9a44f2de74d4e47338e2bfc 431 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 230 262 - T 17-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 BJD13_07205 18096d8ae9a44f2de74d4e47338e2bfc 431 SUPERFAMILY SSF53720 3 427 2.16E-80 T 17-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BJD13_07205 18096d8ae9a44f2de74d4e47338e2bfc 431 Pfam PF00815 Histidinol dehydrogenase 26 427 2.6E-163 T 17-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BJD13_07205 18096d8ae9a44f2de74d4e47338e2bfc 431 Gene3D G3DSA:3.40.50.1980 234 349 1.2E-120 T 17-10-2018 BJD13_19955 937b3c17b6ca58c2a98e495def7b7029 351 SUPERFAMILY SSF53756 7 318 2.62E-33 T 17-10-2018 BJD13_19955 937b3c17b6ca58c2a98e495def7b7029 351 PIRSF PIRSF028458 1 351 3.5E-183 T 17-10-2018 IPR016886 Predicted glycerophosphotransferase UCP028458 BJD13_19955 937b3c17b6ca58c2a98e495def7b7029 351 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 191 313 1.7E-8 T 17-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 BJD13_00540 0b7403a4e9c368370c116db2ff4d7e9f 997 Pfam PF13700 Domain of unknown function (DUF4158) 6 164 1.2E-26 T 17-10-2018 IPR025296 Domain of unknown function DUF4158 BJD13_00540 0b7403a4e9c368370c116db2ff4d7e9f 997 Pfam PF01526 Tn3 transposase DDE domain 589 975 5.9E-150 T 17-10-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 BJD13_11095 2beb68e2945ec93a825ef549ff278a2b 314 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 9 312 3.0E-42 T 17-10-2018 IPR020801 Polyketide synthase, acyl transferase domain BJD13_11095 2beb68e2945ec93a825ef549ff278a2b 314 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 6 292 2.7E-100 T 17-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 BJD13_11095 2beb68e2945ec93a825ef549ff278a2b 314 SUPERFAMILY SSF55048 132 199 9.42E-17 T 17-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding BJD13_11095 2beb68e2945ec93a825ef549ff278a2b 314 Pfam PF00698 Acyl transferase domain 8 268 1.2E-37 T 17-10-2018 IPR014043 Acyl transferase BJD13_11095 2beb68e2945ec93a825ef549ff278a2b 314 Gene3D G3DSA:3.30.70.250 127 199 1.4E-98 T 17-10-2018 BJD13_11095 2beb68e2945ec93a825ef549ff278a2b 314 Gene3D G3DSA:3.40.366.10 8 288 1.4E-98 T 17-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 BJD13_11095 2beb68e2945ec93a825ef549ff278a2b 314 PIRSF PIRSF000446 4 312 1.3E-103 T 17-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 BJD13_11095 2beb68e2945ec93a825ef549ff278a2b 314 SUPERFAMILY SSF52151 6 311 1.26E-76 T 17-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase BJD13_17630 3c24b28deead2556fd6ed23ec149f84f 326 Gene3D G3DSA:3.90.180.10 3 309 1.7E-87 T 17-10-2018 BJD13_17630 3c24b28deead2556fd6ed23ec149f84f 326 Pfam PF00107 Zinc-binding dehydrogenase 151 266 1.6E-14 T 17-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 BJD13_17630 3c24b28deead2556fd6ed23ec149f84f 326 SUPERFAMILY SSF50129 1 144 5.33E-31 T 17-10-2018 IPR011032 GroES-like superfamily BJD13_17630 3c24b28deead2556fd6ed23ec149f84f 326 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 89 1.5E-9 T 17-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 BJD13_17630 3c24b28deead2556fd6ed23ec149f84f 326 SMART SM00829 11 323 5.3E-6 T 17-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 BJD13_17630 3c24b28deead2556fd6ed23ec149f84f 326 Gene3D G3DSA:3.40.50.720 122 293 1.7E-87 T 17-10-2018 BJD13_17630 3c24b28deead2556fd6ed23ec149f84f 326 SUPERFAMILY SSF51735 115 290 9.77E-40 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_05030 020599635acf90ac7c5bb95622917ca1 393 Pfam PF00067 Cytochrome P450 268 380 3.4E-15 T 17-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 BJD13_05030 020599635acf90ac7c5bb95622917ca1 393 PRINTS PR00359 B-class P450 signature 286 313 6.8E-23 T 17-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BJD13_05030 020599635acf90ac7c5bb95622917ca1 393 PRINTS PR00359 B-class P450 signature 148 163 6.8E-23 T 17-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BJD13_05030 020599635acf90ac7c5bb95622917ca1 393 PRINTS PR00359 B-class P450 signature 268 279 6.8E-23 T 17-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BJD13_05030 020599635acf90ac7c5bb95622917ca1 393 PRINTS PR00359 B-class P450 signature 314 329 6.8E-23 T 17-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BJD13_05030 020599635acf90ac7c5bb95622917ca1 393 PRINTS PR00359 B-class P450 signature 85 96 6.8E-23 T 17-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BJD13_05030 020599635acf90ac7c5bb95622917ca1 393 PRINTS PR00359 B-class P450 signature 131 147 6.8E-23 T 17-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BJD13_05030 020599635acf90ac7c5bb95622917ca1 393 PRINTS PR00359 B-class P450 signature 335 344 6.8E-23 T 17-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BJD13_05030 020599635acf90ac7c5bb95622917ca1 393 PRINTS PR00359 B-class P450 signature 344 355 6.8E-23 T 17-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BJD13_05030 020599635acf90ac7c5bb95622917ca1 393 SUPERFAMILY SSF48264 16 392 9.82E-71 T 17-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 BJD13_05030 020599635acf90ac7c5bb95622917ca1 393 Gene3D G3DSA:1.10.630.10 3 393 3.3E-97 T 17-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 BJD13_20840 0d215e06e3f301351d6e48c3b670643e 228 Pfam PF03922 OmpW family 70 228 3.1E-38 T 17-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 BJD13_20840 0d215e06e3f301351d6e48c3b670643e 228 Gene3D G3DSA:2.40.160.20 46 228 4.9E-41 T 17-10-2018 BJD13_20840 0d215e06e3f301351d6e48c3b670643e 228 SUPERFAMILY SSF56925 56 228 1.39E-18 T 17-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel BJD13_07975 2253a8701ff79b516ed9df5bed8d78a6 259 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 236 5.8E-69 T 17-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 BJD13_07975 2253a8701ff79b516ed9df5bed8d78a6 259 Pfam PF01975 Survival protein SurE 3 185 8.2E-61 T 17-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 BJD13_07975 2253a8701ff79b516ed9df5bed8d78a6 259 Gene3D G3DSA:3.40.1210.10 1 252 3.6E-92 T 17-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 BJD13_07975 2253a8701ff79b516ed9df5bed8d78a6 259 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 253 41.181 T 17-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 BJD13_07975 2253a8701ff79b516ed9df5bed8d78a6 259 SUPERFAMILY SSF64167 1 250 4.32E-84 T 17-10-2018 BJD13_04690 bf5d82f9820eabd04ef5a4b56c00f839 414 Gene3D G3DSA:3.40.605.10 15 408 5.5E-157 T 17-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 BJD13_04690 bf5d82f9820eabd04ef5a4b56c00f839 414 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 320 341 - T 17-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 BJD13_04690 bf5d82f9820eabd04ef5a4b56c00f839 414 PIRSF PIRSF000151 1 414 4.2E-173 T 17-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 BJD13_04690 bf5d82f9820eabd04ef5a4b56c00f839 414 Pfam PF00171 Aldehyde dehydrogenase family 11 291 3.4E-12 T 17-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 BJD13_04690 bf5d82f9820eabd04ef5a4b56c00f839 414 SUPERFAMILY SSF53720 6 413 1.23E-109 T 17-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BJD13_04690 bf5d82f9820eabd04ef5a4b56c00f839 414 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 11 401 4.8E-138 T 17-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 BJD13_04690 bf5d82f9820eabd04ef5a4b56c00f839 414 Gene3D G3DSA:3.40.309.10 223 371 5.5E-157 T 17-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 BJD13_04690 bf5d82f9820eabd04ef5a4b56c00f839 414 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 2 413 41.355 T 17-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 BJD13_11980 4644e73116c49e31abfee4cf7e517e33 232 PIRSF PIRSF002155 1 227 1.4E-70 T 17-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_11980 4644e73116c49e31abfee4cf7e517e33 232 Gene3D G3DSA:3.40.50.790 67 159 8.8E-76 T 17-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich BJD13_11980 4644e73116c49e31abfee4cf7e517e33 232 Gene3D G3DSA:3.30.190.20 20 225 8.8E-76 T 17-10-2018 BJD13_11980 4644e73116c49e31abfee4cf7e517e33 232 Pfam PF00687 Ribosomal protein L1p/L10e family 29 220 1.0E-45 T 17-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein BJD13_11980 4644e73116c49e31abfee4cf7e517e33 232 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 2.4E-100 T 17-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 BJD13_11980 4644e73116c49e31abfee4cf7e517e33 232 SUPERFAMILY SSF56808 5 225 1.44E-74 T 17-10-2018 IPR023674 Ribosomal protein L1-like BJD13_11980 4644e73116c49e31abfee4cf7e517e33 232 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 17-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_11980 4644e73116c49e31abfee4cf7e517e33 232 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 40.413 T 17-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 BJD13_09540 b38b5dde133114eab0e3b80057e88c23 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 148 8.4E-63 T 17-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BJD13_09540 b38b5dde133114eab0e3b80057e88c23 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 316 51.207 T 17-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BJD13_09540 b38b5dde133114eab0e3b80057e88c23 319 Gene3D G3DSA:3.90.226.10 1 318 7.0E-122 T 17-10-2018 BJD13_09540 b38b5dde133114eab0e3b80057e88c23 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 197 206 4.7E-49 T 17-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BJD13_09540 b38b5dde133114eab0e3b80057e88c23 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 88 99 4.7E-49 T 17-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BJD13_09540 b38b5dde133114eab0e3b80057e88c23 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 134 150 4.7E-49 T 17-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BJD13_09540 b38b5dde133114eab0e3b80057e88c23 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 153 166 4.7E-49 T 17-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BJD13_09540 b38b5dde133114eab0e3b80057e88c23 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 113 131 4.7E-49 T 17-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BJD13_09540 b38b5dde133114eab0e3b80057e88c23 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 169 182 4.7E-49 T 17-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BJD13_09540 b38b5dde133114eab0e3b80057e88c23 319 SUPERFAMILY SSF52096 5 316 1.23E-104 T 17-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BJD13_09540 b38b5dde133114eab0e3b80057e88c23 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 315 3.8E-154 T 17-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BJD13_09420 76fc35ad51e009c1f29723127ab8dec2 258 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 4.7E-23 T 17-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 BJD13_09420 76fc35ad51e009c1f29723127ab8dec2 258 PRINTS PR00599 Methionine aminopeptidase-1 signature 193 205 4.7E-23 T 17-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 BJD13_09420 76fc35ad51e009c1f29723127ab8dec2 258 PRINTS PR00599 Methionine aminopeptidase-1 signature 162 174 4.7E-23 T 17-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 BJD13_09420 76fc35ad51e009c1f29723127ab8dec2 258 PRINTS PR00599 Methionine aminopeptidase-1 signature 92 108 4.7E-23 T 17-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 BJD13_09420 76fc35ad51e009c1f29723127ab8dec2 258 Hamap MF_01974 Methionine aminopeptidase [map]. 3 251 42.347 T 17-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 BJD13_09420 76fc35ad51e009c1f29723127ab8dec2 258 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 4 250 4.3E-100 T 17-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 BJD13_09420 76fc35ad51e009c1f29723127ab8dec2 258 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 168 186 - T 17-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 BJD13_09420 76fc35ad51e009c1f29723127ab8dec2 258 SUPERFAMILY SSF55920 5 250 8.64E-96 T 17-10-2018 IPR036005 Creatinase/aminopeptidase-like BJD13_09420 76fc35ad51e009c1f29723127ab8dec2 258 Gene3D G3DSA:3.90.230.10 2 257 3.2E-114 T 17-10-2018 BJD13_09420 76fc35ad51e009c1f29723127ab8dec2 258 Pfam PF00557 Metallopeptidase family M24 12 242 3.6E-56 T 17-10-2018 IPR000994 Peptidase M24 BJD13_17205 ab847bc51124e6b06d6347ef915b88b1 1602 SMART SM00736 581 671 0.0023 T 17-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 BJD13_17205 ab847bc51124e6b06d6347ef915b88b1 1602 SMART SM00736 760 850 0.068 T 17-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 BJD13_17205 ab847bc51124e6b06d6347ef915b88b1 1602 Pfam PF03160 Calx-beta domain 464 558 3.7E-18 T 17-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 BJD13_17205 ab847bc51124e6b06d6347ef915b88b1 1602 Pfam PF03160 Calx-beta domain 235 331 3.7E-6 T 17-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 BJD13_17205 ab847bc51124e6b06d6347ef915b88b1 1602 Pfam PF03160 Calx-beta domain 346 446 2.5E-10 T 17-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 BJD13_17205 ab847bc51124e6b06d6347ef915b88b1 1602 Pfam PF03160 Calx-beta domain 127 217 2.9E-5 T 17-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 BJD13_17205 ab847bc51124e6b06d6347ef915b88b1 1602 SUPERFAMILY SSF49313 765 847 6.28E-9 T 17-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 BJD13_17205 ab847bc51124e6b06d6347ef915b88b1 1602 Gene3D G3DSA:2.60.40.2030 475 579 1.3E-25 T 17-10-2018 IPR038081 CalX-like domain superfamily BJD13_17205 ab847bc51124e6b06d6347ef915b88b1 1602 Gene3D G3DSA:2.60.40.2030 248 354 9.8E-15 T 17-10-2018 IPR038081 CalX-like domain superfamily BJD13_17205 ab847bc51124e6b06d6347ef915b88b1 1602 Gene3D G3DSA:2.60.40.2030 136 243 1.1E-11 T 17-10-2018 IPR038081 CalX-like domain superfamily BJD13_17205 ab847bc51124e6b06d6347ef915b88b1 1602 SUPERFAMILY SSF49313 949 1024 9.25E-9 T 17-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 BJD13_17205 ab847bc51124e6b06d6347ef915b88b1 1602 SUPERFAMILY SSF141072 466 606 8.5E-31 T 17-10-2018 IPR038081 CalX-like domain superfamily BJD13_17205 ab847bc51124e6b06d6347ef915b88b1 1602 SUPERFAMILY SSF141072 136 244 3.4E-16 T 17-10-2018 IPR038081 CalX-like domain superfamily BJD13_17205 ab847bc51124e6b06d6347ef915b88b1 1602 Pfam PF03797 Autotransporter beta-domain 1330 1580 5.1E-47 T 17-10-2018 IPR005546 Autotransporter beta-domain BJD13_17205 ab847bc51124e6b06d6347ef915b88b1 1602 SUPERFAMILY SSF103515 1323 1599 8.37E-44 T 17-10-2018 IPR036709 Autotransporter beta-domain superfamily BJD13_17205 ab847bc51124e6b06d6347ef915b88b1 1602 SMART SM00237 458 558 7.1E-12 T 17-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 BJD13_17205 ab847bc51124e6b06d6347ef915b88b1 1602 SMART SM00237 125 221 0.068 T 17-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 BJD13_17205 ab847bc51124e6b06d6347ef915b88b1 1602 SMART SM00237 234 332 0.0052 T 17-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 BJD13_17205 ab847bc51124e6b06d6347ef915b88b1 1602 SMART SM00237 345 446 5.3E-7 T 17-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 BJD13_17205 ab847bc51124e6b06d6347ef915b88b1 1602 Gene3D G3DSA:2.60.40.10 755 843 3.4E-11 T 17-10-2018 IPR013783 Immunoglobulin-like fold BJD13_17205 ab847bc51124e6b06d6347ef915b88b1 1602 Gene3D G3DSA:2.60.40.10 580 662 4.5E-14 T 17-10-2018 IPR013783 Immunoglobulin-like fold BJD13_17205 ab847bc51124e6b06d6347ef915b88b1 1602 SUPERFAMILY SSF49313 582 668 9.6E-11 T 17-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 BJD13_17205 ab847bc51124e6b06d6347ef915b88b1 1602 SUPERFAMILY SSF141072 354 467 8.24E-22 T 17-10-2018 IPR038081 CalX-like domain superfamily BJD13_17205 ab847bc51124e6b06d6347ef915b88b1 1602 Gene3D G3DSA:2.60.40.10 844 934 3.1E-13 T 17-10-2018 IPR013783 Immunoglobulin-like fold BJD13_17205 ab847bc51124e6b06d6347ef915b88b1 1602 Gene3D G3DSA:2.60.40.10 663 750 7.6E-12 T 17-10-2018 IPR013783 Immunoglobulin-like fold BJD13_17205 ab847bc51124e6b06d6347ef915b88b1 1602 Gene3D G3DSA:2.60.40.10 935 1024 2.6E-12 T 17-10-2018 IPR013783 Immunoglobulin-like fold BJD13_17205 ab847bc51124e6b06d6347ef915b88b1 1602 Pfam PF05345 Putative Ig domain 971 1010 1.2E-7 T 17-10-2018 IPR008009 Putative Ig BJD13_17205 ab847bc51124e6b06d6347ef915b88b1 1602 Pfam PF05345 Putative Ig domain 615 651 4.8E-10 T 17-10-2018 IPR008009 Putative Ig BJD13_17205 ab847bc51124e6b06d6347ef915b88b1 1602 Pfam PF05345 Putative Ig domain 791 831 2.3E-8 T 17-10-2018 IPR008009 Putative Ig BJD13_17205 ab847bc51124e6b06d6347ef915b88b1 1602 Pfam PF05345 Putative Ig domain 880 920 2.2E-8 T 17-10-2018 IPR008009 Putative Ig BJD13_17205 ab847bc51124e6b06d6347ef915b88b1 1602 Pfam PF05345 Putative Ig domain 700 741 3.0E-9 T 17-10-2018 IPR008009 Putative Ig BJD13_17205 ab847bc51124e6b06d6347ef915b88b1 1602 Gene3D G3DSA:2.60.40.2030 356 474 1.6E-18 T 17-10-2018 IPR038081 CalX-like domain superfamily BJD13_17205 ab847bc51124e6b06d6347ef915b88b1 1602 SUPERFAMILY SSF141072 245 355 5.36E-22 T 17-10-2018 IPR038081 CalX-like domain superfamily BJD13_17205 ab847bc51124e6b06d6347ef915b88b1 1602 SUPERFAMILY SSF49313 678 743 1.26E-7 T 17-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 BJD13_17205 ab847bc51124e6b06d6347ef915b88b1 1602 SMART SM00869 1327 1591 5.0E-42 T 17-10-2018 IPR005546 Autotransporter beta-domain BJD13_17205 ab847bc51124e6b06d6347ef915b88b1 1602 SUPERFAMILY SSF49313 858 936 4.97E-9 T 17-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 BJD13_17205 ab847bc51124e6b06d6347ef915b88b1 1602 Gene3D G3DSA:2.40.128.130 1302 1601 2.0E-54 T 17-10-2018 IPR036709 Autotransporter beta-domain superfamily BJD13_23105 ff19357a243a553bb67df88b8c901db2 728 Pfam PF14200 Ricin-type beta-trefoil lectin domain-like 481 546 4.0E-9 T 17-10-2018 IPR000772 Ricin B, lectin domain BJD13_23105 ff19357a243a553bb67df88b8c901db2 728 Gene3D G3DSA:2.80.10.50 470 563 8.5E-19 T 17-10-2018 BJD13_23105 ff19357a243a553bb67df88b8c901db2 728 Gene3D G3DSA:2.80.10.50 605 689 2.0E-22 T 17-10-2018 BJD13_23105 ff19357a243a553bb67df88b8c901db2 728 SUPERFAMILY SSF50370 606 724 6.62E-30 T 17-10-2018 IPR035992 Ricin B-like lectins BJD13_23105 ff19357a243a553bb67df88b8c901db2 728 SUPERFAMILY SSF50370 519 642 8.25E-28 T 17-10-2018 IPR035992 Ricin B-like lectins BJD13_23105 ff19357a243a553bb67df88b8c901db2 728 Gene3D G3DSA:3.40.390.10 234 433 4.5E-12 T 17-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 BJD13_23105 ff19357a243a553bb67df88b8c901db2 728 SUPERFAMILY SSF55486 234 421 6.07E-17 T 17-10-2018 BJD13_23105 ff19357a243a553bb67df88b8c901db2 728 Pfam PF00652 Ricin-type beta-trefoil lectin domain 567 682 1.3E-19 T 17-10-2018 IPR000772 Ricin B, lectin domain BJD13_23105 ff19357a243a553bb67df88b8c901db2 728 SMART SM00458 602 726 1.0E-21 T 17-10-2018 IPR000772 Ricin B, lectin domain BJD13_23105 ff19357a243a553bb67df88b8c901db2 728 SMART SM00458 474 600 4.6E-18 T 17-10-2018 IPR000772 Ricin B, lectin domain BJD13_23105 ff19357a243a553bb67df88b8c901db2 728 Gene3D G3DSA:2.80.10.50 690 728 1.6E-9 T 17-10-2018 BJD13_23105 ff19357a243a553bb67df88b8c901db2 728 Gene3D G3DSA:2.80.10.50 564 604 4.1E-9 T 17-10-2018 BJD13_23105 ff19357a243a553bb67df88b8c901db2 728 Pfam PF13583 Metallo-peptidase family M12B Reprolysin-like 237 442 1.3E-22 T 17-10-2018 BJD13_02005 9eba2949fa45952c767359f1e8537c06 141 SMART SM00411 44 141 6.7E-7 T 17-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BJD13_02005 9eba2949fa45952c767359f1e8537c06 141 Gene3D G3DSA:4.10.520.10 43 141 4.6E-14 T 17-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 BJD13_02005 9eba2949fa45952c767359f1e8537c06 141 SUPERFAMILY SSF47729 44 139 4.12E-13 T 17-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 BJD13_02005 9eba2949fa45952c767359f1e8537c06 141 Pfam PF00216 Bacterial DNA-binding protein 45 139 3.1E-14 T 17-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BJD13_09315 508eb94ba41a745d1e264096ba2bc493 589 Gene3D G3DSA:3.40.630.10 25 323 1.1E-33 T 17-10-2018 BJD13_09315 508eb94ba41a745d1e264096ba2bc493 589 SMART SM00631 40 296 8.2E-5 T 17-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 BJD13_09315 508eb94ba41a745d1e264096ba2bc493 589 Pfam PF00246 Zinc carboxypeptidase 45 216 7.4E-40 T 17-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 BJD13_09315 508eb94ba41a745d1e264096ba2bc493 589 SUPERFAMILY SSF53187 38 322 3.31E-52 T 17-10-2018 BJD13_10630 16640be92d9576a895ad45983a6f67e7 702 Gene3D G3DSA:3.40.50.880 551 700 8.9E-28 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD13_10630 16640be92d9576a895ad45983a6f67e7 702 Gene3D G3DSA:1.20.1370.20 454 550 1.0E-29 T 17-10-2018 BJD13_10630 16640be92d9576a895ad45983a6f67e7 702 SUPERFAMILY SSF56634 34 531 3.01E-218 T 17-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BJD13_10630 16640be92d9576a895ad45983a6f67e7 702 SUPERFAMILY SSF52317 554 673 1.44E-13 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD13_10630 16640be92d9576a895ad45983a6f67e7 702 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 373 381 - T 17-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BJD13_10630 16640be92d9576a895ad45983a6f67e7 702 PIRSF PIRSF038927 15 700 3.0E-296 T 17-10-2018 IPR024712 Catalase, mono-functional, haem-containing, clade 2 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 BJD13_10630 16640be92d9576a895ad45983a6f67e7 702 Gene3D G3DSA:2.40.180.10 2 451 1.2E-203 T 17-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 BJD13_10630 16640be92d9576a895ad45983a6f67e7 702 Pfam PF06628 Catalase-related immune-responsive 457 519 7.5E-22 T 17-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BJD13_10630 16640be92d9576a895ad45983a6f67e7 702 PRINTS PR00067 Catalase signature 328 355 1.1E-68 T 17-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BJD13_10630 16640be92d9576a895ad45983a6f67e7 702 PRINTS PR00067 Catalase signature 56 79 1.1E-68 T 17-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BJD13_10630 16640be92d9576a895ad45983a6f67e7 702 PRINTS PR00067 Catalase signature 360 386 1.1E-68 T 17-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BJD13_10630 16640be92d9576a895ad45983a6f67e7 702 PRINTS PR00067 Catalase signature 140 157 1.1E-68 T 17-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BJD13_10630 16640be92d9576a895ad45983a6f67e7 702 PRINTS PR00067 Catalase signature 119 137 1.1E-68 T 17-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BJD13_10630 16640be92d9576a895ad45983a6f67e7 702 PRINTS PR00067 Catalase signature 159 177 1.1E-68 T 17-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BJD13_10630 16640be92d9576a895ad45983a6f67e7 702 Pfam PF00199 Catalase 43 428 3.3E-180 T 17-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BJD13_10630 16640be92d9576a895ad45983a6f67e7 702 SMART SM01060 43 431 1.3E-278 T 17-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BJD13_10630 16640be92d9576a895ad45983a6f67e7 702 ProSitePatterns PS00438 Catalase proximal active site signature. 79 95 - T 17-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BJD13_11875 bdc6ff9c112b137ea417084d4c0ce2e4 89 PRINTS PR00973 Ribosomal protein S17 family signature 61 71 5.4E-11 T 17-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_11875 bdc6ff9c112b137ea417084d4c0ce2e4 89 PRINTS PR00973 Ribosomal protein S17 family signature 29 52 5.4E-11 T 17-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_11875 bdc6ff9c112b137ea417084d4c0ce2e4 89 PRINTS PR00973 Ribosomal protein S17 family signature 71 78 5.4E-11 T 17-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_11875 bdc6ff9c112b137ea417084d4c0ce2e4 89 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 11 81 1.6E-34 T 17-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_11875 bdc6ff9c112b137ea417084d4c0ce2e4 89 Pfam PF00366 Ribosomal protein S17 15 82 6.5E-32 T 17-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_11875 bdc6ff9c112b137ea417084d4c0ce2e4 89 Gene3D G3DSA:2.40.50.140 6 88 4.3E-34 T 17-10-2018 BJD13_11875 bdc6ff9c112b137ea417084d4c0ce2e4 89 SUPERFAMILY SSF50249 11 86 4.2E-31 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD13_11875 bdc6ff9c112b137ea417084d4c0ce2e4 89 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 11 81 9.0E-36 T 17-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_11875 bdc6ff9c112b137ea417084d4c0ce2e4 89 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 7 85 23.631 T 17-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_15945 8f9f2f7a9be895b76a9b12602e546229 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 136 156 7.4E-42 T 17-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BJD13_15945 8f9f2f7a9be895b76a9b12602e546229 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 241 258 7.4E-42 T 17-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BJD13_15945 8f9f2f7a9be895b76a9b12602e546229 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 60 87 7.4E-42 T 17-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BJD13_15945 8f9f2f7a9be895b76a9b12602e546229 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 10 27 7.4E-42 T 17-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BJD13_15945 8f9f2f7a9be895b76a9b12602e546229 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 201 225 7.4E-42 T 17-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BJD13_15945 8f9f2f7a9be895b76a9b12602e546229 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 176 200 7.4E-42 T 17-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BJD13_15945 8f9f2f7a9be895b76a9b12602e546229 341 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 7 162 6.8E-51 T 17-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BJD13_15945 8f9f2f7a9be895b76a9b12602e546229 341 SUPERFAMILY SSF51735 5 183 2.54E-52 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_15945 8f9f2f7a9be895b76a9b12602e546229 341 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 191 212 - T 17-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BJD13_15945 8f9f2f7a9be895b76a9b12602e546229 341 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 6 325 39.157 T 17-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BJD13_15945 8f9f2f7a9be895b76a9b12602e546229 341 Gene3D G3DSA:1.10.1040.10 192 340 9.6E-47 T 17-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BJD13_15945 8f9f2f7a9be895b76a9b12602e546229 341 Gene3D G3DSA:3.40.50.720 2 190 1.1E-57 T 17-10-2018 BJD13_15945 8f9f2f7a9be895b76a9b12602e546229 341 PIRSF PIRSF000114 1 335 2.4E-98 T 17-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BJD13_15945 8f9f2f7a9be895b76a9b12602e546229 341 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 183 321 5.3E-47 T 17-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BJD13_15945 8f9f2f7a9be895b76a9b12602e546229 341 SUPERFAMILY SSF48179 182 335 2.04E-51 T 17-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BJD13_06375 fe13fd8d59bbd3bfc3b76d77b3cec98a 408 Gene3D G3DSA:1.10.287.130 119 251 1.3E-24 T 17-10-2018 BJD13_06375 fe13fd8d59bbd3bfc3b76d77b3cec98a 408 SMART SM00387 297 406 2.1E-27 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_06375 fe13fd8d59bbd3bfc3b76d77b3cec98a 408 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 363 4.4E-19 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_06375 fe13fd8d59bbd3bfc3b76d77b3cec98a 408 PRINTS PR00344 Bacterial sensor protein C-terminal signature 366 384 4.4E-19 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_06375 fe13fd8d59bbd3bfc3b76d77b3cec98a 408 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 403 4.4E-19 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_06375 fe13fd8d59bbd3bfc3b76d77b3cec98a 408 PRINTS PR00344 Bacterial sensor protein C-terminal signature 335 349 4.4E-19 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_06375 fe13fd8d59bbd3bfc3b76d77b3cec98a 408 SUPERFAMILY SSF55874 252 404 9.04E-42 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_06375 fe13fd8d59bbd3bfc3b76d77b3cec98a 408 SUPERFAMILY SSF47384 149 189 8.24E-6 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD13_06375 fe13fd8d59bbd3bfc3b76d77b3cec98a 408 Pfam PF00512 His Kinase A (phospho-acceptor) domain 155 253 3.5E-7 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_06375 fe13fd8d59bbd3bfc3b76d77b3cec98a 408 Gene3D G3DSA:3.30.565.10 259 408 8.1E-45 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_06375 fe13fd8d59bbd3bfc3b76d77b3cec98a 408 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 301 404 3.5E-19 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_02140 d033b62b0af356ab2e0159134ea47f85 216 Pfam PF01799 [2Fe-2S] binding domain 121 208 2.4E-29 T 17-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 BJD13_02140 d033b62b0af356ab2e0159134ea47f85 216 Gene3D G3DSA:3.10.20.30 40 124 5.6E-33 T 17-10-2018 IPR012675 Beta-grasp domain superfamily BJD13_02140 d033b62b0af356ab2e0159134ea47f85 216 SUPERFAMILY SSF54292 50 135 1.07E-26 T 17-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 BJD13_02140 d033b62b0af356ab2e0159134ea47f85 216 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 87 95 - T 17-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 BJD13_02140 d033b62b0af356ab2e0159134ea47f85 216 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 54 102 1.5E-9 T 17-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 BJD13_02140 d033b62b0af356ab2e0159134ea47f85 216 Gene3D G3DSA:1.10.150.120 125 215 2.9E-34 T 17-10-2018 BJD13_02140 d033b62b0af356ab2e0159134ea47f85 216 SUPERFAMILY SSF47741 132 213 1.11E-26 T 17-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily BJD13_23265 5fff89bad355406128b90067e177e2cd 598 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 6 597 1.3E-266 T 17-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 BJD13_23265 5fff89bad355406128b90067e177e2cd 598 Pfam PF09382 RQC domain 401 507 8.5E-41 T 17-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 BJD13_23265 5fff89bad355406128b90067e177e2cd 598 SMART SM00956 404 507 2.4E-55 T 17-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 BJD13_23265 5fff89bad355406128b90067e177e2cd 598 Gene3D G3DSA:3.40.50.300 1 200 3.6E-81 T 17-10-2018 BJD13_23265 5fff89bad355406128b90067e177e2cd 598 SUPERFAMILY SSF52540 4 189 1.49E-43 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_23265 5fff89bad355406128b90067e177e2cd 598 Pfam PF00270 DEAD/DEAH box helicase 22 177 2.7E-18 T 17-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BJD13_23265 5fff89bad355406128b90067e177e2cd 598 SMART SM00487 14 210 8.7E-26 T 17-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BJD13_23265 5fff89bad355406128b90067e177e2cd 598 Pfam PF00271 Helicase conserved C-terminal domain 217 322 1.8E-14 T 17-10-2018 IPR001650 Helicase, C-terminal BJD13_23265 5fff89bad355406128b90067e177e2cd 598 SUPERFAMILY SSF47819 522 596 3.27E-22 T 17-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 BJD13_23265 5fff89bad355406128b90067e177e2cd 598 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 8 456 4.4E-154 T 17-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 BJD13_23265 5fff89bad355406128b90067e177e2cd 598 SUPERFAMILY SSF52540 200 447 1.99E-62 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_23265 5fff89bad355406128b90067e177e2cd 598 Gene3D G3DSA:1.10.150.80 523 598 2.2E-21 T 17-10-2018 BJD13_23265 5fff89bad355406128b90067e177e2cd 598 Gene3D G3DSA:1.10.10.10 333 518 2.0E-52 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_23265 5fff89bad355406128b90067e177e2cd 598 Pfam PF16124 RecQ zinc-binding 335 397 7.2E-20 T 17-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain BJD13_23265 5fff89bad355406128b90067e177e2cd 598 SMART SM00490 242 323 5.9E-23 T 17-10-2018 IPR001650 Helicase, C-terminal BJD13_23265 5fff89bad355406128b90067e177e2cd 598 Gene3D G3DSA:3.40.50.300 201 332 5.3E-37 T 17-10-2018 BJD13_23265 5fff89bad355406128b90067e177e2cd 598 Pfam PF00570 HRDC domain 527 594 9.6E-22 T 17-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 BJD13_23265 5fff89bad355406128b90067e177e2cd 598 SMART SM00341 524 597 1.5E-10 T 17-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 BJD13_06485 6d74bd16b9a263988310e7a44f1f26af 188 Pfam PF16823 Atypical PilZ domain, cyclic di-GMP receptor 46 186 1.4E-48 T 17-10-2018 IPR031800 Cyclic di-GMP receptor, atypical PilZ domain BJD13_19790 6738b7ac6adb75546055e793bdfac784 316 PIRSF PIRSF003097 18 310 9.2E-57 T 17-10-2018 IPR004513 Cell division protein FtsX GO:0016021 BJD13_10620 4f11d6b406a1518dbd1188e791eaafa4 544 ProSitePatterns PS00941 Carboxylesterases type-B signature 2. 110 120 - T 17-10-2018 IPR019819 Carboxylesterase type B, conserved site BJD13_10620 4f11d6b406a1518dbd1188e791eaafa4 544 Pfam PF00135 Carboxylesterase family 40 528 2.0E-121 T 17-10-2018 IPR002018 Carboxylesterase, type B BJD13_10620 4f11d6b406a1518dbd1188e791eaafa4 544 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 206 221 - T 17-10-2018 IPR019826 Carboxylesterase type B, active site BJD13_10620 4f11d6b406a1518dbd1188e791eaafa4 544 SUPERFAMILY SSF53474 41 530 5.83E-124 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_10620 4f11d6b406a1518dbd1188e791eaafa4 544 Gene3D G3DSA:3.40.50.1820 34 539 7.2E-151 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_23180 f8b047da72fbb8b762148a20d910aa2e 172 PRINTS PR01021 OMPA domain signature 99 114 6.6E-13 T 17-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BJD13_23180 f8b047da72fbb8b762148a20d910aa2e 172 PRINTS PR01021 OMPA domain signature 69 91 6.6E-13 T 17-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BJD13_23180 f8b047da72fbb8b762148a20d910aa2e 172 PRINTS PR01021 OMPA domain signature 114 130 6.6E-13 T 17-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BJD13_23180 f8b047da72fbb8b762148a20d910aa2e 172 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 3 169 29.673 T 17-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 BJD13_23180 f8b047da72fbb8b762148a20d910aa2e 172 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 67 169 1.2E-42 T 17-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 BJD13_23180 f8b047da72fbb8b762148a20d910aa2e 172 SUPERFAMILY SSF103088 65 169 1.02E-31 T 17-10-2018 IPR036737 OmpA-like domain superfamily BJD13_23180 f8b047da72fbb8b762148a20d910aa2e 172 Pfam PF00691 OmpA family 68 163 1.6E-16 T 17-10-2018 IPR006665 OmpA-like domain BJD13_23180 f8b047da72fbb8b762148a20d910aa2e 172 Gene3D G3DSA:3.30.1330.60 55 171 3.3E-34 T 17-10-2018 IPR036737 OmpA-like domain superfamily BJD13_22335 d35b7af7bf841d6b4425f51d6138c3c7 432 Pfam PF05569 BlaR1 peptidase M56 7 256 5.1E-71 T 17-10-2018 IPR008756 Peptidase M56 BJD13_22335 d35b7af7bf841d6b4425f51d6138c3c7 432 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 310 386 1.6E-17 T 17-10-2018 IPR006260 TonB/TolA, C-terminal BJD13_22335 d35b7af7bf841d6b4425f51d6138c3c7 432 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 309 386 1.2E-19 T 17-10-2018 IPR037682 TonB, C-terminal GO:0055085 BJD13_22335 d35b7af7bf841d6b4425f51d6138c3c7 432 Gene3D G3DSA:3.30.1150.10 300 387 4.4E-23 T 17-10-2018 BJD13_22335 d35b7af7bf841d6b4425f51d6138c3c7 432 SUPERFAMILY SSF74653 308 384 1.57E-19 T 17-10-2018 BJD13_06135 3144b1624ab3eba35510ccf18af10d81 360 Gene3D G3DSA:1.10.10.60 256 360 3.2E-20 T 17-10-2018 BJD13_06135 3144b1624ab3eba35510ccf18af10d81 360 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 49 232 1.4E-38 T 17-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal BJD13_06135 3144b1624ab3eba35510ccf18af10d81 360 Pfam PF12833 Helix-turn-helix domain 281 357 1.6E-16 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD13_06135 3144b1624ab3eba35510ccf18af10d81 360 SMART SM00342 275 357 1.7E-20 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD13_06135 3144b1624ab3eba35510ccf18af10d81 360 SUPERFAMILY SSF46689 311 358 1.21E-11 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_21810 22fb7dfee32c5c522fb8b51738d09cb5 370 Gene3D G3DSA:3.40.50.2000 185 348 2.0E-19 T 17-10-2018 BJD13_21810 22fb7dfee32c5c522fb8b51738d09cb5 370 Pfam PF13439 Glycosyltransferase Family 4 16 169 9.2E-25 T 17-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 BJD13_21810 22fb7dfee32c5c522fb8b51738d09cb5 370 SUPERFAMILY SSF53756 1 368 9.03E-53 T 17-10-2018 BJD13_21810 22fb7dfee32c5c522fb8b51738d09cb5 370 Gene3D G3DSA:3.40.50.2000 5 184 1.0E-22 T 17-10-2018 BJD13_21810 22fb7dfee32c5c522fb8b51738d09cb5 370 Pfam PF00534 Glycosyl transferases group 1 193 342 1.5E-13 T 17-10-2018 IPR001296 Glycosyl transferase, family 1 BJD13_08615 7ae8bb773f9374b552c707bbfa738248 330 Gene3D G3DSA:3.20.20.100 10 319 2.8E-59 T 17-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BJD13_08615 7ae8bb773f9374b552c707bbfa738248 330 SUPERFAMILY SSF51430 10 305 2.23E-57 T 17-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BJD13_08615 7ae8bb773f9374b552c707bbfa738248 330 Pfam PF00248 Aldo/keto reductase family 23 305 3.3E-37 T 17-10-2018 IPR023210 NADP-dependent oxidoreductase domain BJD13_12605 c17c8a97d6eedbeb550093a862161114 322 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 164 183 1.3E-12 T 17-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 BJD13_12605 c17c8a97d6eedbeb550093a862161114 322 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 236 248 1.3E-12 T 17-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 BJD13_12605 c17c8a97d6eedbeb550093a862161114 322 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 275 288 1.3E-12 T 17-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 BJD13_12605 c17c8a97d6eedbeb550093a862161114 322 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 113 123 1.3E-12 T 17-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 BJD13_12605 c17c8a97d6eedbeb550093a862161114 322 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 208 214 1.3E-12 T 17-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 BJD13_12605 c17c8a97d6eedbeb550093a862161114 322 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 262 274 1.3E-12 T 17-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 BJD13_12605 c17c8a97d6eedbeb550093a862161114 322 SUPERFAMILY SSF51430 1 319 2.62E-94 T 17-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BJD13_12605 c17c8a97d6eedbeb550093a862161114 322 Pfam PF00248 Aldo/keto reductase family 16 318 4.2E-72 T 17-10-2018 IPR023210 NADP-dependent oxidoreductase domain BJD13_12605 c17c8a97d6eedbeb550093a862161114 322 Gene3D G3DSA:3.20.20.100 1 321 2.6E-115 T 17-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BJD13_21910 b67df23dbfe855f48d0e67c2c5597611 923 Pfam PF00593 TonB dependent receptor 348 920 5.5E-41 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_21910 b67df23dbfe855f48d0e67c2c5597611 923 Pfam PF07715 TonB-dependent Receptor Plug Domain 47 155 5.8E-28 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_21910 b67df23dbfe855f48d0e67c2c5597611 923 Gene3D G3DSA:2.170.130.10 27 160 3.1E-39 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_21910 b67df23dbfe855f48d0e67c2c5597611 923 SUPERFAMILY SSF56935 19 923 1.25E-101 T 17-10-2018 BJD13_19275 8e7e12727a8f508508eb64a19e7e509d 520 SMART SM00052 263 507 1.1E-93 T 17-10-2018 IPR001633 EAL domain BJD13_19275 8e7e12727a8f508508eb64a19e7e509d 520 Pfam PF12792 CSS motif domain associated with EAL 40 231 5.8E-32 T 17-10-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain BJD13_19275 8e7e12727a8f508508eb64a19e7e509d 520 Pfam PF00563 EAL domain 270 501 9.5E-63 T 17-10-2018 IPR001633 EAL domain BJD13_19275 8e7e12727a8f508508eb64a19e7e509d 520 SUPERFAMILY SSF141868 270 514 4.18E-76 T 17-10-2018 IPR035919 EAL domain superfamily BJD13_19275 8e7e12727a8f508508eb64a19e7e509d 520 Gene3D G3DSA:3.20.20.450 264 515 2.3E-84 T 17-10-2018 IPR035919 EAL domain superfamily BJD13_19775 78541ccffd72c66c7e80968947c8e481 113 SUPERFAMILY SSF52833 3 109 3.03E-40 T 17-10-2018 IPR036249 Thioredoxin-like superfamily BJD13_19775 78541ccffd72c66c7e80968947c8e481 113 TIGRFAM TIGR01068 thioredoxin: thioredoxin 10 107 7.4E-38 T 17-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 BJD13_19775 78541ccffd72c66c7e80968947c8e481 113 Pfam PF00085 Thioredoxin 5 106 3.5E-32 T 17-10-2018 IPR013766 Thioredoxin domain GO:0045454 BJD13_19775 78541ccffd72c66c7e80968947c8e481 113 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 17-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 BJD13_19775 78541ccffd72c66c7e80968947c8e481 113 PIRSF PIRSF000077 2 108 7.4E-42 T 17-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 BJD13_19775 78541ccffd72c66c7e80968947c8e481 113 Gene3D G3DSA:3.40.30.10 1 108 1.7E-35 T 17-10-2018 BJD13_19775 78541ccffd72c66c7e80968947c8e481 113 PRINTS PR00421 Thioredoxin family signature 24 32 4.1E-8 T 17-10-2018 BJD13_19775 78541ccffd72c66c7e80968947c8e481 113 PRINTS PR00421 Thioredoxin family signature 32 41 4.1E-8 T 17-10-2018 BJD13_19775 78541ccffd72c66c7e80968947c8e481 113 PRINTS PR00421 Thioredoxin family signature 72 83 4.1E-8 T 17-10-2018 BJD13_06460 a3407d66d155589d01b5e9a6d4086e54 401 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 4 400 3.7E-108 T 17-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 BJD13_06460 a3407d66d155589d01b5e9a6d4086e54 401 Gene3D G3DSA:1.20.1330.10 214 394 2.5E-8 T 17-10-2018 BJD13_06460 a3407d66d155589d01b5e9a6d4086e54 401 Gene3D G3DSA:1.20.1330.10 42 213 2.8E-47 T 17-10-2018 BJD13_06460 a3407d66d155589d01b5e9a6d4086e54 401 Pfam PF00700 Bacterial flagellin C-terminal helical region 318 398 5.3E-5 T 17-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BJD13_06460 a3407d66d155589d01b5e9a6d4086e54 401 SUPERFAMILY SSF64518 1 401 1.44E-76 T 17-10-2018 BJD13_06460 a3407d66d155589d01b5e9a6d4086e54 401 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 5.0E-22 T 17-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BJD13_17905 f5e0fd67af40a9031f82c1951a4b69cf 746 SUPERFAMILY SSF109604 354 491 9.42E-15 T 17-10-2018 BJD13_17905 f5e0fd67af40a9031f82c1951a4b69cf 746 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 7 586 1.2E-191 T 17-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BJD13_17905 f5e0fd67af40a9031f82c1951a4b69cf 746 Pfam PF05746 DALR anticodon binding domain 638 731 4.8E-7 T 17-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 BJD13_17905 f5e0fd67af40a9031f82c1951a4b69cf 746 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 248 263 2.0E-29 T 17-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BJD13_17905 f5e0fd67af40a9031f82c1951a4b69cf 746 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 320 336 2.0E-29 T 17-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BJD13_17905 f5e0fd67af40a9031f82c1951a4b69cf 746 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 8 21 2.0E-29 T 17-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BJD13_17905 f5e0fd67af40a9031f82c1951a4b69cf 746 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 396 415 2.0E-29 T 17-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BJD13_17905 f5e0fd67af40a9031f82c1951a4b69cf 746 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 53 65 2.0E-29 T 17-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BJD13_17905 f5e0fd67af40a9031f82c1951a4b69cf 746 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 7 744 1.2E-197 T 17-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BJD13_17905 f5e0fd67af40a9031f82c1951a4b69cf 746 SMART SM00836 641 744 0.0014 T 17-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 BJD13_17905 f5e0fd67af40a9031f82c1951a4b69cf 746 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 4 744 24.358 T 17-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BJD13_23350 9b40569698ed05fe7ea0a13b5085c9c0 814 Pfam PF00912 Transglycosylase 167 346 1.6E-53 T 17-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BJD13_23350 9b40569698ed05fe7ea0a13b5085c9c0 814 PIRSF PIRSF002799 3 795 1.5E-282 T 17-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BJD13_23350 9b40569698ed05fe7ea0a13b5085c9c0 814 Gene3D G3DSA:1.10.3810.10 164 370 4.7E-217 T 17-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BJD13_23350 9b40569698ed05fe7ea0a13b5085c9c0 814 Gene3D G3DSA:3.40.710.10 66 723 4.7E-217 T 17-10-2018 BJD13_23350 9b40569698ed05fe7ea0a13b5085c9c0 814 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 31 761 2.2E-286 T 17-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BJD13_23350 9b40569698ed05fe7ea0a13b5085c9c0 814 SUPERFAMILY SSF53955 167 368 1.8E-57 T 17-10-2018 IPR023346 Lysozyme-like domain superfamily BJD13_23350 9b40569698ed05fe7ea0a13b5085c9c0 814 SUPERFAMILY SSF56601 328 768 1.04E-98 T 17-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BJD13_23350 9b40569698ed05fe7ea0a13b5085c9c0 814 Gene3D G3DSA:3.30.2060.10 74 163 4.7E-217 T 17-10-2018 BJD13_23350 9b40569698ed05fe7ea0a13b5085c9c0 814 Pfam PF00905 Penicillin binding protein transpeptidase domain 441 682 1.6E-16 T 17-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 BJD13_23350 9b40569698ed05fe7ea0a13b5085c9c0 814 Pfam PF14814 Bifunctional transglycosylase second domain 76 160 1.8E-19 T 17-10-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BJD13_17895 e2c6a40923f828f3c3ba16c6f2c88d50 604 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 80 174 4.6E-15 T 17-10-2018 IPR007831 General secretory system II, protein E, N-terminal BJD13_17895 e2c6a40923f828f3c3ba16c6f2c88d50 604 Gene3D G3DSA:3.30.450.90 198 324 1.6E-42 T 17-10-2018 BJD13_17895 e2c6a40923f828f3c3ba16c6f2c88d50 604 SUPERFAMILY SSF160246 81 169 5.49E-13 T 17-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily BJD13_17895 e2c6a40923f828f3c3ba16c6f2c88d50 604 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 419 433 - T 17-10-2018 IPR001482 Type II/IV secretion system protein BJD13_17895 e2c6a40923f828f3c3ba16c6f2c88d50 604 SUPERFAMILY SSF52540 213 599 3.42E-95 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_17895 e2c6a40923f828f3c3ba16c6f2c88d50 604 SMART SM00382 352 473 4.6E-6 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_17895 e2c6a40923f828f3c3ba16c6f2c88d50 604 Gene3D G3DSA:3.40.50.300 327 601 1.4E-103 T 17-10-2018 BJD13_17895 e2c6a40923f828f3c3ba16c6f2c88d50 604 Pfam PF00437 Type II/IV secretion system protein 230 491 1.9E-76 T 17-10-2018 IPR001482 Type II/IV secretion system protein BJD13_06685 9d1c545de1721eb3808bc1c1c2568df9 130 Pfam PF00072 Response regulator receiver domain 7 119 5.7E-31 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_06685 9d1c545de1721eb3808bc1c1c2568df9 130 Gene3D G3DSA:3.40.50.2300 1 126 1.1E-39 T 17-10-2018 BJD13_06685 9d1c545de1721eb3808bc1c1c2568df9 130 SMART SM00448 5 119 6.5E-35 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_06685 9d1c545de1721eb3808bc1c1c2568df9 130 SUPERFAMILY SSF52172 3 126 2.13E-38 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_17800 4b2425afd4764a1034ca501437641d91 419 Gene3D G3DSA:3.30.390.10 22 416 8.7E-165 T 17-10-2018 IPR029017 Enolase-like, N-terminal BJD13_17800 4b2425afd4764a1034ca501437641d91 419 SUPERFAMILY SSF54826 26 129 6.92E-31 T 17-10-2018 BJD13_17800 4b2425afd4764a1034ca501437641d91 419 SUPERFAMILY SSF51604 115 401 3.67E-70 T 17-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily BJD13_17800 4b2425afd4764a1034ca501437641d91 419 Gene3D G3DSA:3.20.20.120 122 384 8.7E-165 T 17-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily BJD13_17800 4b2425afd4764a1034ca501437641d91 419 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 102 127 - T 17-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 BJD13_17800 4b2425afd4764a1034ca501437641d91 419 SMART SM00922 145 274 3.4E-12 T 17-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal BJD13_17800 4b2425afd4764a1034ca501437641d91 419 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 30 127 2.6E-31 T 17-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain BJD13_17800 4b2425afd4764a1034ca501437641d91 419 Pfam PF13378 Enolase C-terminal domain-like 211 394 2.5E-38 T 17-10-2018 IPR029065 Enolase C-terminal domain-like BJD13_13040 d09dd2399c41e2c79b66d9651bda9284 276 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 4 274 1.4E-127 T 17-10-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 BJD13_13040 d09dd2399c41e2c79b66d9651bda9284 276 Pfam PF00756 Putative esterase 21 268 1.1E-66 T 17-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 BJD13_13040 d09dd2399c41e2c79b66d9651bda9284 276 SUPERFAMILY SSF53474 1 274 1.28E-89 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_13040 d09dd2399c41e2c79b66d9651bda9284 276 Gene3D G3DSA:3.40.50.1820 1 275 2.0E-96 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_21205 faf252586eec3453a9517c7e3d36a421 185 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 5 172 1.7E-72 T 17-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 BJD13_21205 faf252586eec3453a9517c7e3d36a421 185 Gene3D G3DSA:2.60.120.10 1 184 6.5E-72 T 17-10-2018 IPR014710 RmlC-like jelly roll fold BJD13_21205 faf252586eec3453a9517c7e3d36a421 185 SUPERFAMILY SSF51182 2 176 1.23E-73 T 17-10-2018 IPR011051 RmlC-like cupin domain superfamily BJD13_21205 faf252586eec3453a9517c7e3d36a421 185 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 177 6.0E-100 T 17-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 BJD13_21205 faf252586eec3453a9517c7e3d36a421 185 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 2 174 7.0E-80 T 17-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 BJD13_04505 7313083948f69062e16509e3f44d476f 309 Gene3D G3DSA:3.40.190.10 121 239 3.3E-26 T 17-10-2018 BJD13_04505 7313083948f69062e16509e3f44d476f 309 SUPERFAMILY SSF53850 34 282 8.57E-20 T 17-10-2018 BJD13_04505 7313083948f69062e16509e3f44d476f 309 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 41 289 6.7E-46 T 17-10-2018 BJD13_04505 7313083948f69062e16509e3f44d476f 309 Gene3D G3DSA:3.40.190.10 42 269 3.3E-26 T 17-10-2018 BJD13_15425 b7a9fe292791ee9cd78125c1852e4ed0 293 Gene3D G3DSA:3.40.50.1220 15 270 2.2E-81 T 17-10-2018 BJD13_15425 b7a9fe292791ee9cd78125c1852e4ed0 293 Gene3D G3DSA:3.30.1600.10 37 198 2.2E-81 T 17-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily BJD13_15425 b7a9fe292791ee9cd78125c1852e4ed0 293 Pfam PF02146 Sir2 family 27 229 5.7E-47 T 17-10-2018 IPR003000 Sirtuin family GO:0070403 BJD13_15425 b7a9fe292791ee9cd78125c1852e4ed0 293 Hamap MF_01967 NAD-dependent protein deacetylase [cobB]. 3 273 64.666 T 17-10-2018 IPR026587 Sirtuin, class II Reactome: R-HSA-2151201 BJD13_15425 b7a9fe292791ee9cd78125c1852e4ed0 293 SUPERFAMILY SSF52467 11 273 2.05E-80 T 17-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily BJD13_12540 d7384db0ec93ad4d6927b09ff72b30e6 237 SMART SM00448 9 121 3.1E-41 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_12540 d7384db0ec93ad4d6927b09ff72b30e6 237 Pfam PF00072 Response regulator receiver domain 11 121 1.2E-28 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_12540 d7384db0ec93ad4d6927b09ff72b30e6 237 SUPERFAMILY SSF46894 130 229 7.65E-22 T 17-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BJD13_12540 d7384db0ec93ad4d6927b09ff72b30e6 237 SMART SM00862 155 229 6.3E-16 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD13_12540 d7384db0ec93ad4d6927b09ff72b30e6 237 SUPERFAMILY SSF52172 9 134 1.99E-40 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_12540 d7384db0ec93ad4d6927b09ff72b30e6 237 Gene3D G3DSA:3.40.50.2300 2 128 2.5E-38 T 17-10-2018 BJD13_12540 d7384db0ec93ad4d6927b09ff72b30e6 237 Gene3D G3DSA:1.10.10.10 129 233 6.1E-22 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_12540 d7384db0ec93ad4d6927b09ff72b30e6 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 229 1.6E-17 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD13_02260 c2242c25fb3a5813b45c69902bf9bfb8 700 Gene3D G3DSA:1.10.1380.10 92 481 2.3E-231 T 17-10-2018 BJD13_02260 c2242c25fb3a5813b45c69902bf9bfb8 700 SUPERFAMILY SSF55486 54 700 5.13E-211 T 17-10-2018 BJD13_02260 c2242c25fb3a5813b45c69902bf9bfb8 700 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 486 498 3.5E-22 T 17-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 BJD13_02260 c2242c25fb3a5813b45c69902bf9bfb8 700 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 504 516 3.5E-22 T 17-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 BJD13_02260 c2242c25fb3a5813b45c69902bf9bfb8 700 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 596 607 3.5E-22 T 17-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 BJD13_02260 c2242c25fb3a5813b45c69902bf9bfb8 700 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 525 541 3.5E-22 T 17-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 BJD13_02260 c2242c25fb3a5813b45c69902bf9bfb8 700 Pfam PF01431 Peptidase family M13 494 697 2.0E-72 T 17-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 BJD13_02260 c2242c25fb3a5813b45c69902bf9bfb8 700 Gene3D G3DSA:3.40.390.10 61 700 2.3E-231 T 17-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 BJD13_02260 c2242c25fb3a5813b45c69902bf9bfb8 700 Pfam PF05649 Peptidase family M13 67 442 4.0E-97 T 17-10-2018 IPR008753 Peptidase M13, N-terminal domain GO:0006508 BJD13_13440 705e140e6d51afbf8325fac7d55e4818 794 Pfam PF00593 TonB dependent receptor 266 792 4.5E-46 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_13440 705e140e6d51afbf8325fac7d55e4818 794 Gene3D G3DSA:2.170.130.10 45 175 1.6E-9 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_13440 705e140e6d51afbf8325fac7d55e4818 794 Pfam PF07715 TonB-dependent Receptor Plug Domain 60 172 7.5E-10 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_13440 705e140e6d51afbf8325fac7d55e4818 794 SUPERFAMILY SSF56935 33 792 4.48E-94 T 17-10-2018 BJD13_17700 ecee572071c73a87820ae65e3369f6de 923 Gene3D G3DSA:2.60.40.10 731 811 4.2E-28 T 17-10-2018 IPR013783 Immunoglobulin-like fold BJD13_17700 ecee572071c73a87820ae65e3369f6de 923 Pfam PF00703 Glycosyl hydrolases family 2 283 395 8.5E-12 T 17-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 BJD13_17700 ecee572071c73a87820ae65e3369f6de 923 SUPERFAMILY SSF49785 27 269 7.53E-44 T 17-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD13_17700 ecee572071c73a87820ae65e3369f6de 923 Gene3D G3DSA:2.60.40.10 814 923 3.0E-34 T 17-10-2018 IPR013783 Immunoglobulin-like fold BJD13_17700 ecee572071c73a87820ae65e3369f6de 923 PRINTS PR00132 Glycosyl hydrolase family 2 signature 203 218 9.2E-15 T 17-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 BJD13_17700 ecee572071c73a87820ae65e3369f6de 923 PRINTS PR00132 Glycosyl hydrolase family 2 signature 407 421 9.2E-15 T 17-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 BJD13_17700 ecee572071c73a87820ae65e3369f6de 923 PRINTS PR00132 Glycosyl hydrolase family 2 signature 438 456 9.2E-15 T 17-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 BJD13_17700 ecee572071c73a87820ae65e3369f6de 923 PRINTS PR00132 Glycosyl hydrolase family 2 signature 508 523 9.2E-15 T 17-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 BJD13_17700 ecee572071c73a87820ae65e3369f6de 923 SUPERFAMILY SSF51445 398 729 2.06E-75 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily BJD13_17700 ecee572071c73a87820ae65e3369f6de 923 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 508 522 - T 17-10-2018 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 BJD13_17700 ecee572071c73a87820ae65e3369f6de 923 Gene3D G3DSA:3.20.20.80 398 728 7.0E-108 T 17-10-2018 BJD13_17700 ecee572071c73a87820ae65e3369f6de 923 SUPERFAMILY SSF49303 282 395 1.87E-13 T 17-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily BJD13_17700 ecee572071c73a87820ae65e3369f6de 923 Gene3D G3DSA:2.60.40.10 273 395 4.5E-25 T 17-10-2018 IPR013783 Immunoglobulin-like fold BJD13_17700 ecee572071c73a87820ae65e3369f6de 923 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 402 609 9.6E-30 T 17-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 BJD13_17700 ecee572071c73a87820ae65e3369f6de 923 Gene3D G3DSA:2.60.120.260 126 270 7.1E-42 T 17-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD13_17700 ecee572071c73a87820ae65e3369f6de 923 Pfam PF16355 Domain of unknown function (DUF4982) 744 804 3.8E-24 T 17-10-2018 IPR032311 Domain of unknown function DUF4982 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 BJD13_17700 ecee572071c73a87820ae65e3369f6de 923 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 147 269 7.8E-13 T 17-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 BJD13_11670 7e849c93a274bbe0bc4f87b29b781607 317 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 34 306 1.7E-86 T 17-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 BJD13_11670 7e849c93a274bbe0bc4f87b29b781607 317 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 304 1.8E-15 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD13_11670 7e849c93a274bbe0bc4f87b29b781607 317 SUPERFAMILY SSF161098 33 300 7.48E-52 T 17-10-2018 IPR035906 MetI-like superfamily BJD13_11670 7e849c93a274bbe0bc4f87b29b781607 317 Gene3D G3DSA:1.10.3720.10 36 307 4.0E-58 T 17-10-2018 IPR035906 MetI-like superfamily BJD13_11670 7e849c93a274bbe0bc4f87b29b781607 317 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 35 308 1.5E-119 T 17-10-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 BJD13_21935 b3756ddbbe643ef72d0fcf0e0e72899f 947 Gene3D G3DSA:2.170.130.10 31 168 9.0E-34 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_21935 b3756ddbbe643ef72d0fcf0e0e72899f 947 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 163 4.4E-24 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_21935 b3756ddbbe643ef72d0fcf0e0e72899f 947 Pfam PF00593 TonB dependent receptor 427 944 2.1E-49 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_21935 b3756ddbbe643ef72d0fcf0e0e72899f 947 SUPERFAMILY SSF56935 36 947 5.9E-102 T 17-10-2018 BJD13_06090 f8d144dad0e9f97b4f3f2d7d1d8b1139 915 Pfam PF00384 Molybdopterin oxidoreductase 79 494 3.2E-79 T 17-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_06090 f8d144dad0e9f97b4f3f2d7d1d8b1139 915 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 7 24 - T 17-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 BJD13_06090 f8d144dad0e9f97b4f3f2d7d1d8b1139 915 Pfam PF04324 BFD-like [2Fe-2S] binding domain 863 907 9.9E-8 T 17-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain BJD13_06090 f8d144dad0e9f97b4f3f2d7d1d8b1139 915 SUPERFAMILY SSF53706 3 528 6.02E-191 T 17-10-2018 BJD13_06090 f8d144dad0e9f97b4f3f2d7d1d8b1139 915 SUPERFAMILY SSF50692 559 709 2.49E-39 T 17-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily BJD13_06090 f8d144dad0e9f97b4f3f2d7d1d8b1139 915 PIRSF PIRSF036643 1 728 1.7E-162 T 17-10-2018 BJD13_06090 f8d144dad0e9f97b4f3f2d7d1d8b1139 915 Gene3D G3DSA:2.40.40.20 583 710 1.9E-38 T 17-10-2018 BJD13_06090 f8d144dad0e9f97b4f3f2d7d1d8b1139 915 Gene3D G3DSA:3.40.50.740 74 549 2.1E-191 T 17-10-2018 BJD13_06090 f8d144dad0e9f97b4f3f2d7d1d8b1139 915 SMART SM00926 2 60 1.1E-20 T 17-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_06090 f8d144dad0e9f97b4f3f2d7d1d8b1139 915 Gene3D G3DSA:2.20.25.90 1 62 3.7E-16 T 17-10-2018 BJD13_06090 f8d144dad0e9f97b4f3f2d7d1d8b1139 915 Gene3D G3DSA:1.10.10.1100 863 914 8.0E-9 T 17-10-2018 BJD13_06090 f8d144dad0e9f97b4f3f2d7d1d8b1139 915 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 4 59 3.1E-16 T 17-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_06090 f8d144dad0e9f97b4f3f2d7d1d8b1139 915 Pfam PF01568 Molydopterin dinucleotide binding domain 594 703 3.9E-27 T 17-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 BJD13_06090 f8d144dad0e9f97b4f3f2d7d1d8b1139 915 Gene3D G3DSA:3.40.228.10 144 345 2.1E-191 T 17-10-2018 BJD13_18225 4110fc62c6262535a33aa24e28e6c415 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.613 T 17-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_18225 4110fc62c6262535a33aa24e28e6c415 78 Pfam PF00830 Ribosomal L28 family 3 62 3.7E-27 T 17-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_18225 4110fc62c6262535a33aa24e28e6c415 78 Gene3D G3DSA:2.30.170.40 2 78 1.8E-34 T 17-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_18225 4110fc62c6262535a33aa24e28e6c415 78 SUPERFAMILY SSF143800 2 77 4.32E-31 T 17-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_18225 4110fc62c6262535a33aa24e28e6c415 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 2.1E-26 T 17-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_06970 834fb4b464ad7cd86e98f7ed28992f78 560 Gene3D G3DSA:3.30.300.310 461 560 3.8E-31 T 17-10-2018 BJD13_06970 834fb4b464ad7cd86e98f7ed28992f78 560 Pfam PF13193 AMP-binding enzyme C-terminal domain 474 548 1.9E-18 T 17-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BJD13_06970 834fb4b464ad7cd86e98f7ed28992f78 560 SUPERFAMILY SSF56801 23 557 5.23E-155 T 17-10-2018 BJD13_06970 834fb4b464ad7cd86e98f7ed28992f78 560 ProSitePatterns PS00455 Putative AMP-binding domain signature. 213 224 - T 17-10-2018 IPR020845 AMP-binding, conserved site BJD13_06970 834fb4b464ad7cd86e98f7ed28992f78 560 Pfam PF00501 AMP-binding enzyme 31 465 7.4E-117 T 17-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BJD13_06970 834fb4b464ad7cd86e98f7ed28992f78 560 Gene3D G3DSA:3.40.50.12780 13 456 2.9E-120 T 17-10-2018 BJD13_06490 8b16cab7c5e81ad54bc11cab8aec899e 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 202 4.1E-17 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_06490 8b16cab7c5e81ad54bc11cab8aec899e 210 SMART SM00421 145 202 2.4E-21 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_06490 8b16cab7c5e81ad54bc11cab8aec899e 210 SUPERFAMILY SSF46894 139 206 5.78E-19 T 17-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BJD13_06490 8b16cab7c5e81ad54bc11cab8aec899e 210 SMART SM00448 1 114 1.6E-26 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_06490 8b16cab7c5e81ad54bc11cab8aec899e 210 Pfam PF00072 Response regulator receiver domain 3 114 5.0E-26 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_06490 8b16cab7c5e81ad54bc11cab8aec899e 210 Gene3D G3DSA:3.40.50.12740 1 207 6.3E-60 T 17-10-2018 BJD13_06490 8b16cab7c5e81ad54bc11cab8aec899e 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 1.5E-12 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_06490 8b16cab7c5e81ad54bc11cab8aec899e 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 1.5E-12 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_06490 8b16cab7c5e81ad54bc11cab8aec899e 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 1.5E-12 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_06490 8b16cab7c5e81ad54bc11cab8aec899e 210 SUPERFAMILY SSF52172 2 130 3.7E-31 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_22210 9117c3087091150183e95e085f18b776 80 SUPERFAMILY SSF143800 1 79 2.35E-22 T 17-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_22210 9117c3087091150183e95e085f18b776 80 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 79 1.8E-20 T 17-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_22210 9117c3087091150183e95e085f18b776 80 ProSitePatterns PS01143 Ribosomal protein L31 signature. 49 70 - T 17-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_22210 9117c3087091150183e95e085f18b776 80 PRINTS PR01249 Ribosomal protein L31 signature 60 78 7.6E-19 T 17-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_22210 9117c3087091150183e95e085f18b776 80 PRINTS PR01249 Ribosomal protein L31 signature 2 19 7.6E-19 T 17-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_22210 9117c3087091150183e95e085f18b776 80 PRINTS PR01249 Ribosomal protein L31 signature 45 60 7.6E-19 T 17-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_22210 9117c3087091150183e95e085f18b776 80 Gene3D G3DSA:2.30.170.50 1 80 4.5E-25 T 17-10-2018 BJD13_22210 9117c3087091150183e95e085f18b776 80 Pfam PF01197 Ribosomal protein L31 1 79 7.1E-29 T 17-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_22210 9117c3087091150183e95e085f18b776 80 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 80 24.114 T 17-10-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_13555 1d6bd91096914f2525a70fd5ff9a077d 690 Pfam PF00326 Prolyl oligopeptidase family 474 688 1.4E-66 T 17-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 BJD13_13555 1d6bd91096914f2525a70fd5ff9a077d 690 SUPERFAMILY SSF50993 9 419 2.88E-84 T 17-10-2018 BJD13_13555 1d6bd91096914f2525a70fd5ff9a077d 690 Gene3D G3DSA:3.40.50.1820 33 683 2.4E-255 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_13555 1d6bd91096914f2525a70fd5ff9a077d 690 SUPERFAMILY SSF53474 425 685 8.8E-43 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_13555 1d6bd91096914f2525a70fd5ff9a077d 690 Gene3D G3DSA:2.130.10.120 84 416 2.4E-255 T 17-10-2018 BJD13_13555 1d6bd91096914f2525a70fd5ff9a077d 690 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 599 614 6.6E-47 T 17-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 BJD13_13555 1d6bd91096914f2525a70fd5ff9a077d 690 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 617 639 6.6E-47 T 17-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 BJD13_13555 1d6bd91096914f2525a70fd5ff9a077d 690 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 483 507 6.6E-47 T 17-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 BJD13_13555 1d6bd91096914f2525a70fd5ff9a077d 690 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 541 561 6.6E-47 T 17-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 BJD13_13555 1d6bd91096914f2525a70fd5ff9a077d 690 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 457 475 6.6E-47 T 17-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 BJD13_13555 1d6bd91096914f2525a70fd5ff9a077d 690 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 511 530 6.6E-47 T 17-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 BJD13_13555 1d6bd91096914f2525a70fd5ff9a077d 690 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 14 415 1.0E-114 T 17-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 BJD13_16570 3e1928e687ed1dcba0ede625028d6264 496 ProSitePatterns PS00216 Sugar transport proteins signature 1. 321 337 - T 17-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 BJD13_16570 3e1928e687ed1dcba0ede625028d6264 496 ProSitePatterns PS00217 Sugar transport proteins signature 2. 146 171 - T 17-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 BJD13_16570 3e1928e687ed1dcba0ede625028d6264 496 Gene3D G3DSA:1.20.1250.20 34 456 2.0E-69 T 17-10-2018 BJD13_16570 3e1928e687ed1dcba0ede625028d6264 496 SUPERFAMILY SSF103473 34 448 1.15E-70 T 17-10-2018 IPR036259 MFS transporter superfamily BJD13_16570 3e1928e687ed1dcba0ede625028d6264 496 Pfam PF07690 Major Facilitator Superfamily 56 401 5.9E-34 T 17-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD13_02385 dc0d1a87cdc8d1b4ad3b381b85a45285 406 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 68 297 6.2E-12 T 17-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BJD13_02385 dc0d1a87cdc8d1b4ad3b381b85a45285 406 Gene3D G3DSA:2.40.420.20 308 376 1.1E-112 T 17-10-2018 BJD13_02385 dc0d1a87cdc8d1b4ad3b381b85a45285 406 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 45 379 3.3E-83 T 17-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 BJD13_02385 dc0d1a87cdc8d1b4ad3b381b85a45285 406 Gene3D G3DSA:2.40.30.170 53 307 1.1E-112 T 17-10-2018 BJD13_02385 dc0d1a87cdc8d1b4ad3b381b85a45285 406 Gene3D G3DSA:1.10.287.470 102 175 1.1E-112 T 17-10-2018 BJD13_02385 dc0d1a87cdc8d1b4ad3b381b85a45285 406 SUPERFAMILY SSF111369 54 304 6.67E-88 T 17-10-2018 BJD13_02385 dc0d1a87cdc8d1b4ad3b381b85a45285 406 Gene3D G3DSA:2.40.50.100 67 211 1.1E-112 T 17-10-2018 BJD13_12620 44895b862ad8e98134f369c77128a75d 316 Gene3D G3DSA:3.40.1190.20 1 315 1.3E-77 T 17-10-2018 IPR029056 Ribokinase-like BJD13_12620 44895b862ad8e98134f369c77128a75d 316 Pfam PF00294 pfkB family carbohydrate kinase 1 310 1.2E-46 T 17-10-2018 IPR011611 Carbohydrate kinase PfkB BJD13_12620 44895b862ad8e98134f369c77128a75d 316 Hamap MF_01987 Ribokinase [rbsK]. 2 315 21.796 T 17-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 BJD13_12620 44895b862ad8e98134f369c77128a75d 316 SUPERFAMILY SSF53613 1 312 7.64E-60 T 17-10-2018 IPR029056 Ribokinase-like BJD13_12620 44895b862ad8e98134f369c77128a75d 316 PRINTS PR00990 Ribokinase signature 102 115 8.4E-19 T 17-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 BJD13_12620 44895b862ad8e98134f369c77128a75d 316 PRINTS PR00990 Ribokinase signature 171 186 8.4E-19 T 17-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 BJD13_12620 44895b862ad8e98134f369c77128a75d 316 PRINTS PR00990 Ribokinase signature 224 235 8.4E-19 T 17-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 BJD13_12620 44895b862ad8e98134f369c77128a75d 316 PRINTS PR00990 Ribokinase signature 6 27 8.4E-19 T 17-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 BJD13_12620 44895b862ad8e98134f369c77128a75d 316 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 261 274 - T 17-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 BJD13_23425 7120d07fd1653eecd21df3ed4274b18a 2405 SUPERFAMILY SSF55874 1944 2125 5.37E-35 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_23425 7120d07fd1653eecd21df3ed4274b18a 2405 SUPERFAMILY SSF47226 1638 1754 3.79E-23 T 17-10-2018 IPR036641 HPT domain superfamily GO:0000160 BJD13_23425 7120d07fd1653eecd21df3ed4274b18a 2405 PRINTS PR00344 Bacterial sensor protein C-terminal signature 2032 2046 3.1E-11 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_23425 7120d07fd1653eecd21df3ed4274b18a 2405 PRINTS PR00344 Bacterial sensor protein C-terminal signature 2112 2125 3.1E-11 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_23425 7120d07fd1653eecd21df3ed4274b18a 2405 PRINTS PR00344 Bacterial sensor protein C-terminal signature 2088 2106 3.1E-11 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_23425 7120d07fd1653eecd21df3ed4274b18a 2405 Pfam PF00072 Response regulator receiver domain 2283 2393 4.4E-26 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_23425 7120d07fd1653eecd21df3ed4274b18a 2405 Gene3D G3DSA:2.30.30.40 2128 2254 1.9E-29 T 17-10-2018 BJD13_23425 7120d07fd1653eecd21df3ed4274b18a 2405 Pfam PF01627 Hpt domain 898 988 1.7E-5 T 17-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BJD13_23425 7120d07fd1653eecd21df3ed4274b18a 2405 Pfam PF01627 Hpt domain 737 824 1.3E-11 T 17-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BJD13_23425 7120d07fd1653eecd21df3ed4274b18a 2405 Pfam PF01627 Hpt domain 13 111 3.2E-7 T 17-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BJD13_23425 7120d07fd1653eecd21df3ed4274b18a 2405 Pfam PF01627 Hpt domain 1640 1733 8.4E-15 T 17-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BJD13_23425 7120d07fd1653eecd21df3ed4274b18a 2405 SMART SM00073 734 831 1.5E-4 T 17-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BJD13_23425 7120d07fd1653eecd21df3ed4274b18a 2405 SMART SM00073 1637 1735 1.3E-15 T 17-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BJD13_23425 7120d07fd1653eecd21df3ed4274b18a 2405 SMART SM00448 2281 2394 7.2E-34 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_23425 7120d07fd1653eecd21df3ed4274b18a 2405 SMART SM00387 1987 2128 9.1E-22 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_23425 7120d07fd1653eecd21df3ed4274b18a 2405 SMART SM00260 2120 2258 2.2E-21 T 17-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BJD13_23425 7120d07fd1653eecd21df3ed4274b18a 2405 SUPERFAMILY SSF50341 2127 2257 8.63E-23 T 17-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 BJD13_23425 7120d07fd1653eecd21df3ed4274b18a 2405 Gene3D G3DSA:1.20.120.160 892 1020 2.4E-6 T 17-10-2018 IPR036641 HPT domain superfamily GO:0000160 BJD13_23425 7120d07fd1653eecd21df3ed4274b18a 2405 Gene3D G3DSA:1.20.120.160 729 858 5.3E-20 T 17-10-2018 IPR036641 HPT domain superfamily GO:0000160 BJD13_23425 7120d07fd1653eecd21df3ed4274b18a 2405 Pfam PF01584 CheW-like domain 2132 2260 1.0E-18 T 17-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BJD13_23425 7120d07fd1653eecd21df3ed4274b18a 2405 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1991 2127 1.2E-15 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_23425 7120d07fd1653eecd21df3ed4274b18a 2405 Gene3D G3DSA:1.20.120.160 1639 1763 9.9E-24 T 17-10-2018 IPR036641 HPT domain superfamily GO:0000160 BJD13_23425 7120d07fd1653eecd21df3ed4274b18a 2405 SUPERFAMILY SSF47226 895 1016 1.7E-13 T 17-10-2018 IPR036641 HPT domain superfamily GO:0000160 BJD13_23425 7120d07fd1653eecd21df3ed4274b18a 2405 SMART SM01231 1804 1942 1.6E-11 T 17-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 BJD13_23425 7120d07fd1653eecd21df3ed4274b18a 2405 Gene3D G3DSA:3.30.565.10 1941 2127 3.5E-51 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_23425 7120d07fd1653eecd21df3ed4274b18a 2405 Gene3D G3DSA:2.40.50.180 2151 2213 1.9E-29 T 17-10-2018 BJD13_23425 7120d07fd1653eecd21df3ed4274b18a 2405 Gene3D G3DSA:3.40.50.12740 2282 2405 1.4E-36 T 17-10-2018 BJD13_23425 7120d07fd1653eecd21df3ed4274b18a 2405 SUPERFAMILY SSF47226 13 133 6.67E-19 T 17-10-2018 IPR036641 HPT domain superfamily GO:0000160 BJD13_23425 7120d07fd1653eecd21df3ed4274b18a 2405 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 1806 1941 2.4E-5 T 17-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 BJD13_23425 7120d07fd1653eecd21df3ed4274b18a 2405 SUPERFAMILY SSF47226 733 843 4.06E-22 T 17-10-2018 IPR036641 HPT domain superfamily GO:0000160 BJD13_23425 7120d07fd1653eecd21df3ed4274b18a 2405 SUPERFAMILY SSF52172 2283 2402 3.13E-34 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_23425 7120d07fd1653eecd21df3ed4274b18a 2405 SUPERFAMILY SSF47226 294 412 2.44E-9 T 17-10-2018 IPR036641 HPT domain superfamily GO:0000160 BJD13_10050 f5de0d6bd6a3f08c63566c68e64df67b 501 SUPERFAMILY SSF53720 5 487 5.37E-146 T 17-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BJD13_10050 f5de0d6bd6a3f08c63566c68e64df67b 501 Pfam PF00171 Aldehyde dehydrogenase family 22 480 5.7E-143 T 17-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 BJD13_10050 f5de0d6bd6a3f08c63566c68e64df67b 501 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 278 289 - T 17-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 BJD13_10050 f5de0d6bd6a3f08c63566c68e64df67b 501 Gene3D G3DSA:3.40.605.10 27 461 2.7E-148 T 17-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 BJD13_10050 f5de0d6bd6a3f08c63566c68e64df67b 501 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 10 484 2.9E-223 T 17-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 BJD13_10050 f5de0d6bd6a3f08c63566c68e64df67b 501 Gene3D G3DSA:3.40.309.10 253 453 2.7E-148 T 17-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 BJD13_05350 1d1d29c6c6133a8c534bf3b53638e4bc 413 Pfam PF02687 FtsX-like permease family 300 406 2.0E-11 T 17-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 BJD13_05350 1d1d29c6c6133a8c534bf3b53638e4bc 413 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 413 6.0E-140 T 17-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 BJD13_05350 1d1d29c6c6133a8c534bf3b53638e4bc 413 Pfam PF12704 MacB-like periplasmic core domain 28 232 8.7E-18 T 17-10-2018 IPR025857 MacB-like periplasmic core domain BJD13_00280 f207e080884ab2ebe8ab7b4f77fc2d13 276 Pfam PF10670 Domain of unknown function (DUF4198) 19 249 3.2E-23 T 17-10-2018 IPR019613 Protein of unknown function DUF4198 BJD13_10310 c148e127a8756d14764dd5341062d1f2 476 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 426 470 - T 17-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 BJD13_10310 c148e127a8756d14764dd5341062d1f2 476 SUPERFAMILY SSF46689 376 423 7.62E-6 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_10310 c148e127a8756d14764dd5341062d1f2 476 Pfam PF12833 Helix-turn-helix domain 395 476 8.5E-17 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD13_10310 c148e127a8756d14764dd5341062d1f2 476 SUPERFAMILY SSF48452 60 164 3.54E-7 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_10310 c148e127a8756d14764dd5341062d1f2 476 SMART SM00342 389 474 1.4E-19 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD13_10310 c148e127a8756d14764dd5341062d1f2 476 Gene3D G3DSA:1.10.10.60 372 476 4.0E-22 T 17-10-2018 BJD13_23920 e06f882a59cea1b0069b9321e4a5a85d 286 Gene3D G3DSA:3.40.50.300 1 284 3.7E-38 T 17-10-2018 BJD13_23920 e06f882a59cea1b0069b9321e4a5a85d 286 Pfam PF13614 AAA domain 1 195 3.6E-23 T 17-10-2018 IPR025669 AAA domain BJD13_23920 e06f882a59cea1b0069b9321e4a5a85d 286 SUPERFAMILY SSF52540 1 280 1.1E-24 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_12140 b5fe33240d3f279db1e726e53b842d8d 565 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 166 176 - T 17-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site BJD13_12140 b5fe33240d3f279db1e726e53b842d8d 565 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 482 550 1.1E-13 T 17-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial BJD13_12140 b5fe33240d3f279db1e726e53b842d8d 565 PRINTS PR00723 Subtilisin serine protease family (S8) signature 226 239 3.4E-18 T 17-10-2018 IPR015500 Peptidase S8, subtilisin-related BJD13_12140 b5fe33240d3f279db1e726e53b842d8d 565 PRINTS PR00723 Subtilisin serine protease family (S8) signature 399 415 3.4E-18 T 17-10-2018 IPR015500 Peptidase S8, subtilisin-related BJD13_12140 b5fe33240d3f279db1e726e53b842d8d 565 PRINTS PR00723 Subtilisin serine protease family (S8) signature 161 180 3.4E-18 T 17-10-2018 IPR015500 Peptidase S8, subtilisin-related BJD13_12140 b5fe33240d3f279db1e726e53b842d8d 565 SUPERFAMILY SSF52743 149 463 2.49E-74 T 17-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BJD13_12140 b5fe33240d3f279db1e726e53b842d8d 565 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 230 240 - T 17-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site BJD13_12140 b5fe33240d3f279db1e726e53b842d8d 565 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 400 410 - T 17-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site BJD13_12140 b5fe33240d3f279db1e726e53b842d8d 565 Pfam PF00082 Subtilase family 161 448 6.8E-51 T 17-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 BJD13_12140 b5fe33240d3f279db1e726e53b842d8d 565 Gene3D G3DSA:2.60.120.380 469 565 5.0E-27 T 17-10-2018 BJD13_12140 b5fe33240d3f279db1e726e53b842d8d 565 Gene3D G3DSA:3.40.50.200 130 468 2.0E-104 T 17-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BJD13_17790 de636a46f4d36b1eb6742355cb1f2a6b 902 SMART SM01217 817 888 5.4E-25 T 17-10-2018 IPR026891 Fibronectin type III-like domain BJD13_17790 de636a46f4d36b1eb6742355cb1f2a6b 902 Gene3D G3DSA:3.20.20.300 28 363 1.1E-103 T 17-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 BJD13_17790 de636a46f4d36b1eb6742355cb1f2a6b 902 SUPERFAMILY SSF51445 33 388 9.79E-97 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily BJD13_17790 de636a46f4d36b1eb6742355cb1f2a6b 902 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 57 346 1.1E-50 T 17-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BJD13_17790 de636a46f4d36b1eb6742355cb1f2a6b 902 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 389 780 1.9E-62 T 17-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 BJD13_17790 de636a46f4d36b1eb6742355cb1f2a6b 902 Pfam PF07691 PA14 domain 483 627 6.9E-31 T 17-10-2018 IPR011658 PA14 domain BJD13_17790 de636a46f4d36b1eb6742355cb1f2a6b 902 Gene3D G3DSA:2.60.40.10 783 897 1.7E-32 T 17-10-2018 IPR013783 Immunoglobulin-like fold BJD13_17790 de636a46f4d36b1eb6742355cb1f2a6b 902 Gene3D G3DSA:3.40.50.1700 557 782 2.3E-58 T 17-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 BJD13_17790 de636a46f4d36b1eb6742355cb1f2a6b 902 SMART SM00758 481 630 1.2E-30 T 17-10-2018 IPR011658 PA14 domain BJD13_17790 de636a46f4d36b1eb6742355cb1f2a6b 902 Pfam PF14310 Fibronectin type III-like domain 817 888 1.3E-18 T 17-10-2018 IPR026891 Fibronectin type III-like domain BJD13_17790 de636a46f4d36b1eb6742355cb1f2a6b 902 SUPERFAMILY SSF56988 482 707 8.76E-51 T 17-10-2018 BJD13_17790 de636a46f4d36b1eb6742355cb1f2a6b 902 PRINTS PR00133 Glycosyl hydrolase family 3 signature 96 115 7.0E-8 T 17-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BJD13_17790 de636a46f4d36b1eb6742355cb1f2a6b 902 PRINTS PR00133 Glycosyl hydrolase family 3 signature 271 289 7.0E-8 T 17-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BJD13_17790 de636a46f4d36b1eb6742355cb1f2a6b 902 Gene3D G3DSA:3.40.50.1700 374 483 5.7E-20 T 17-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 BJD13_17790 de636a46f4d36b1eb6742355cb1f2a6b 902 SUPERFAMILY SSF52279 389 783 2.22E-54 T 17-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 BJD13_01600 05bd8b92e45408fe2d9dd6c1045beb33 148 Pfam PF00376 MerR family regulatory protein 6 42 2.1E-14 T 17-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD13_01600 05bd8b92e45408fe2d9dd6c1045beb33 148 Gene3D G3DSA:1.10.1660.10 1 128 6.2E-33 T 17-10-2018 BJD13_01600 05bd8b92e45408fe2d9dd6c1045beb33 148 Pfam PF09278 MerR, DNA binding 47 112 2.2E-16 T 17-10-2018 IPR015358 Transcription regulator MerR, DNA binding BJD13_01600 05bd8b92e45408fe2d9dd6c1045beb33 148 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 4 142 1.2E-66 T 17-10-2018 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 BJD13_01600 05bd8b92e45408fe2d9dd6c1045beb33 148 ProSitePatterns PS00552 MerR-type HTH domain signature. 8 30 - T 17-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD13_01600 05bd8b92e45408fe2d9dd6c1045beb33 148 SUPERFAMILY SSF46955 5 125 4.4E-29 T 17-10-2018 IPR009061 Putative DNA-binding domain superfamily BJD13_01600 05bd8b92e45408fe2d9dd6c1045beb33 148 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 6 17 1.8E-13 T 17-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD13_01600 05bd8b92e45408fe2d9dd6c1045beb33 148 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 17 30 1.8E-13 T 17-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD13_01600 05bd8b92e45408fe2d9dd6c1045beb33 148 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 40 60 1.8E-13 T 17-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD13_01600 05bd8b92e45408fe2d9dd6c1045beb33 148 SMART SM00422 5 73 1.7E-24 T 17-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD13_00160 5b149ff7b70f59cd0ab7209d8b675374 322 Pfam PF00589 Phage integrase family 135 295 1.3E-14 T 17-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 BJD13_00160 5b149ff7b70f59cd0ab7209d8b675374 322 Gene3D G3DSA:1.10.150.130 4 98 5.3E-19 T 17-10-2018 IPR010998 Integrase/recombinase, N-terminal BJD13_00160 5b149ff7b70f59cd0ab7209d8b675374 322 Gene3D G3DSA:1.10.443.10 99 298 3.6E-42 T 17-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 BJD13_00160 5b149ff7b70f59cd0ab7209d8b675374 322 SUPERFAMILY SSF56349 98 305 7.65E-39 T 17-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BJD13_00160 5b149ff7b70f59cd0ab7209d8b675374 322 SUPERFAMILY SSF47823 7 97 1.22E-23 T 17-10-2018 BJD13_24130 5b149ff7b70f59cd0ab7209d8b675374 322 Pfam PF00589 Phage integrase family 135 295 1.3E-14 T 17-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 BJD13_24130 5b149ff7b70f59cd0ab7209d8b675374 322 Gene3D G3DSA:1.10.150.130 4 98 5.3E-19 T 17-10-2018 IPR010998 Integrase/recombinase, N-terminal BJD13_24130 5b149ff7b70f59cd0ab7209d8b675374 322 Gene3D G3DSA:1.10.443.10 99 298 3.6E-42 T 17-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 BJD13_24130 5b149ff7b70f59cd0ab7209d8b675374 322 SUPERFAMILY SSF56349 98 305 7.65E-39 T 17-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BJD13_24130 5b149ff7b70f59cd0ab7209d8b675374 322 SUPERFAMILY SSF47823 7 97 1.22E-23 T 17-10-2018 BJD13_07560 273d87983035202dbf001538c50d04ec 234 Gene3D G3DSA:3.40.50.1860 108 218 3.2E-85 T 17-10-2018 BJD13_07560 273d87983035202dbf001538c50d04ec 234 SUPERFAMILY SSF53681 6 120 6.54E-37 T 17-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BJD13_07560 273d87983035202dbf001538c50d04ec 234 TIGRFAM TIGR00035 asp_race: aspartate racemase 6 227 1.6E-67 T 17-10-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 BJD13_07560 273d87983035202dbf001538c50d04ec 234 SUPERFAMILY SSF53681 108 218 1.96E-32 T 17-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BJD13_07560 273d87983035202dbf001538c50d04ec 234 Pfam PF01177 Asp/Glu/Hydantoin racemase 11 227 5.0E-62 T 17-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BJD13_07560 273d87983035202dbf001538c50d04ec 234 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 196 206 - T 17-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BJD13_07560 273d87983035202dbf001538c50d04ec 234 Gene3D G3DSA:3.40.50.1860 8 227 3.2E-85 T 17-10-2018 BJD13_23485 fa1fed0f6125c8ef4fd215dac3bd0692 386 SUPERFAMILY SSF50939 36 354 6.21E-62 T 17-10-2018 IPR036278 Sialidase superfamily KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 BJD13_23485 fa1fed0f6125c8ef4fd215dac3bd0692 386 Pfam PF13088 BNR repeat-like domain 61 337 3.6E-89 T 17-10-2018 IPR011040 Sialidase KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 BJD13_23485 fa1fed0f6125c8ef4fd215dac3bd0692 386 Gene3D G3DSA:2.120.10.10 49 352 3.4E-32 T 17-10-2018 BJD13_02495 279efee954f369e7d6490643833b323f 181 Gene3D G3DSA:3.30.160.70 3 74 5.3E-17 T 17-10-2018 BJD13_02495 279efee954f369e7d6490643833b323f 181 Gene3D G3DSA:1.10.10.10 78 161 8.0E-34 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_02495 279efee954f369e7d6490643833b323f 181 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 79 158 9.2E-34 T 17-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 BJD13_02495 279efee954f369e7d6490643833b323f 181 SUPERFAMILY SSF46767 78 160 1.83E-31 T 17-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 BJD13_02495 279efee954f369e7d6490643833b323f 181 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 80 159 1.8E-31 T 17-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 BJD13_02495 279efee954f369e7d6490643833b323f 181 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 129 135 - T 17-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 BJD13_02495 279efee954f369e7d6490643833b323f 181 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 3 75 3.7E-6 T 17-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 BJD13_02495 279efee954f369e7d6490643833b323f 181 SUPERFAMILY SSF53155 4 82 1.2E-18 T 17-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 BJD13_02495 279efee954f369e7d6490643833b323f 181 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 8 159 41.857 T 17-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 BJD13_08125 8abd2f085ba67806d2c83578b88e653e 411 Gene3D G3DSA:2.30.40.10 40 52 1.0E-7 T 17-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BJD13_08125 8abd2f085ba67806d2c83578b88e653e 411 SUPERFAMILY SSF51338 3 350 2.74E-10 T 17-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BJD13_08125 8abd2f085ba67806d2c83578b88e653e 411 Gene3D G3DSA:3.20.20.140 165 321 2.5E-27 T 17-10-2018 BJD13_08125 8abd2f085ba67806d2c83578b88e653e 411 Gene3D G3DSA:3.20.20.140 53 144 1.0E-7 T 17-10-2018 BJD13_08125 8abd2f085ba67806d2c83578b88e653e 411 Pfam PF01979 Amidohydrolase family 186 327 1.0E-9 T 17-10-2018 IPR006680 Amidohydrolase-related GO:0016787 BJD13_08125 8abd2f085ba67806d2c83578b88e653e 411 SUPERFAMILY SSF51556 51 295 1.63E-27 T 17-10-2018 IPR032466 Metal-dependent hydrolase BJD13_02795 be1caf2da05935911048a7710c4a322e 455 Pfam PF01523 Putative modulator of DNA gyrase 39 331 4.7E-60 T 17-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 BJD13_02795 be1caf2da05935911048a7710c4a322e 455 SUPERFAMILY SSF111283 21 453 4.71E-123 T 17-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 BJD13_02795 be1caf2da05935911048a7710c4a322e 455 Gene3D G3DSA:3.30.2290.10 8 239 3.1E-86 T 17-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal BJD13_04260 814f1265fee83fd3ae138028eece6f07 211 SUPERFAMILY SSF52833 10 111 3.12E-21 T 17-10-2018 IPR036249 Thioredoxin-like superfamily BJD13_04260 814f1265fee83fd3ae138028eece6f07 211 Pfam PF13417 Glutathione S-transferase, N-terminal domain 13 87 1.6E-12 T 17-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 BJD13_04260 814f1265fee83fd3ae138028eece6f07 211 Gene3D G3DSA:3.40.30.10 11 200 8.9E-69 T 17-10-2018 BJD13_04260 814f1265fee83fd3ae138028eece6f07 211 SUPERFAMILY SSF47616 82 207 2.56E-24 T 17-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily BJD13_04260 814f1265fee83fd3ae138028eece6f07 211 Pfam PF00043 Glutathione S-transferase, C-terminal domain 102 193 1.1E-6 T 17-10-2018 IPR004046 Glutathione S-transferase, C-terminal BJD13_04260 814f1265fee83fd3ae138028eece6f07 211 Gene3D G3DSA:1.20.1050.10 89 192 8.9E-69 T 17-10-2018 BJD13_06255 241b563ce749853bd3dfe311eeba3b19 401 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 10 399 1.3E-139 T 17-10-2018 IPR002155 Thiolase GO:0016747 BJD13_06255 241b563ce749853bd3dfe311eeba3b19 401 PIRSF PIRSF000429 2 401 8.1E-127 T 17-10-2018 IPR002155 Thiolase GO:0016747 BJD13_06255 241b563ce749853bd3dfe311eeba3b19 401 Gene3D G3DSA:3.40.47.10 10 298 9.3E-147 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 BJD13_06255 241b563ce749853bd3dfe311eeba3b19 401 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 17-10-2018 IPR020610 Thiolase, active site GO:0016747 BJD13_06255 241b563ce749853bd3dfe311eeba3b19 401 Gene3D G3DSA:3.40.47.10 129 395 9.3E-147 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 BJD13_06255 241b563ce749853bd3dfe311eeba3b19 401 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 17-10-2018 IPR020613 Thiolase, conserved site GO:0016747 BJD13_06255 241b563ce749853bd3dfe311eeba3b19 401 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 91 109 - T 17-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 BJD13_06255 241b563ce749853bd3dfe311eeba3b19 401 Pfam PF00108 Thiolase, N-terminal domain 9 271 1.6E-72 T 17-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 BJD13_06255 241b563ce749853bd3dfe311eeba3b19 401 Pfam PF02803 Thiolase, C-terminal domain 278 399 1.9E-45 T 17-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 BJD13_06255 241b563ce749853bd3dfe311eeba3b19 401 SUPERFAMILY SSF53901 7 278 4.76E-74 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 BJD13_06255 241b563ce749853bd3dfe311eeba3b19 401 SUPERFAMILY SSF53901 279 399 3.62E-43 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 BJD13_18330 35c5f25ac8dadd7c5e9358922dac5512 627 PIRSF PIRSF028304 1 627 5.5E-186 T 17-10-2018 IPR010272 Type VI secretion system, TssF-like BJD13_18330 35c5f25ac8dadd7c5e9358922dac5512 627 Pfam PF05947 Type VI secretion system, TssF 6 625 1.0E-223 T 17-10-2018 IPR010272 Type VI secretion system, TssF-like BJD13_18330 35c5f25ac8dadd7c5e9358922dac5512 627 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 5 625 7.8E-212 T 17-10-2018 IPR010272 Type VI secretion system, TssF-like BJD13_10450 b485675f67eb8b9320c80a802f459bcc 304 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 72 142 6.3E-17 T 17-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 BJD13_10450 b485675f67eb8b9320c80a802f459bcc 304 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 62 295 38.5 T 17-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 BJD13_10450 b485675f67eb8b9320c80a802f459bcc 304 PIRSF PIRSF037208 56 303 2.9E-87 T 17-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 BJD13_10450 b485675f67eb8b9320c80a802f459bcc 304 SUPERFAMILY SSF55729 136 295 5.3E-21 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD13_10450 b485675f67eb8b9320c80a802f459bcc 304 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 162 288 1.7E-33 T 17-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 BJD13_16340 5acf00ab8132da2fec81b3102f3b6496 170 Gene3D G3DSA:3.40.140.10 19 163 3.1E-11 T 17-10-2018 BJD13_16340 5acf00ab8132da2fec81b3102f3b6496 170 SUPERFAMILY SSF102712 17 153 7.85E-10 T 17-10-2018 BJD13_16340 5acf00ab8132da2fec81b3102f3b6496 170 Pfam PF14464 Prokaryotic homologs of the JAB domain 21 140 9.2E-9 T 17-10-2018 IPR028090 JAB domain, prokaryotic BJD13_08405 00cc6ee430da7cce8a926fe9e6222a62 513 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 5 503 2.1E-204 T 17-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BJD13_08405 00cc6ee430da7cce8a926fe9e6222a62 513 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 139 155 - T 17-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 BJD13_08405 00cc6ee430da7cce8a926fe9e6222a62 513 SUPERFAMILY SSF48557 5 499 1.57E-185 T 17-10-2018 IPR008948 L-Aspartase-like GO:0003824 BJD13_08405 00cc6ee430da7cce8a926fe9e6222a62 513 Gene3D G3DSA:1.10.275.10 3 197 6.0E-63 T 17-10-2018 IPR024083 Fumarase/histidase, N-terminal BJD13_08405 00cc6ee430da7cce8a926fe9e6222a62 513 Pfam PF00221 Aromatic amino acid lyase 13 470 3.1E-181 T 17-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 BJD13_08405 00cc6ee430da7cce8a926fe9e6222a62 513 Gene3D G3DSA:1.20.200.10 198 506 6.3E-116 T 17-10-2018 BJD13_08405 00cc6ee430da7cce8a926fe9e6222a62 513 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 4 504 45.039 T 17-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BJD13_22175 f2bf56b13d9c6675e655a34e34632c02 286 Pfam PF03755 YicC-like family, N-terminal region 2 152 8.8E-35 T 17-10-2018 IPR013527 YicC-like, N-terminal BJD13_22175 f2bf56b13d9c6675e655a34e34632c02 286 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 286 1.2E-79 T 17-10-2018 IPR005229 Conserved hypothetical protein CHP00255 BJD13_22175 f2bf56b13d9c6675e655a34e34632c02 286 Pfam PF08340 Domain of unknown function (DUF1732) 202 286 7.5E-35 T 17-10-2018 IPR013551 Domain of unknown function DUF1732 BJD13_17010 bea853561249b91186cd994bec07f122 900 SUPERFAMILY SSF52129 470 668 2.46E-17 T 17-10-2018 IPR029030 Caspase-like domain superfamily BJD13_17010 bea853561249b91186cd994bec07f122 900 SUPERFAMILY SSF48452 781 897 3.56E-24 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_17010 bea853561249b91186cd994bec07f122 900 Pfam PF01522 Polysaccharide deacetylase 253 384 3.5E-25 T 17-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 BJD13_17010 bea853561249b91186cd994bec07f122 900 Gene3D G3DSA:3.40.50.1460 472 708 7.4E-36 T 17-10-2018 BJD13_17010 bea853561249b91186cd994bec07f122 900 SUPERFAMILY SSF88713 247 447 5.28E-49 T 17-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 BJD13_17010 bea853561249b91186cd994bec07f122 900 Gene3D G3DSA:3.20.20.370 227 451 2.5E-53 T 17-10-2018 BJD13_17010 bea853561249b91186cd994bec07f122 900 Pfam PF00656 Caspase domain 476 671 2.5E-21 T 17-10-2018 BJD13_17010 bea853561249b91186cd994bec07f122 900 ProSitePatterns PS00018 EF-hand calcium-binding domain. 671 683 - T 17-10-2018 IPR018247 EF-Hand 1, calcium-binding site BJD13_17010 bea853561249b91186cd994bec07f122 900 SMART SM00028 820 853 0.032 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD13_17010 bea853561249b91186cd994bec07f122 900 SMART SM00028 854 887 0.019 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD13_17010 bea853561249b91186cd994bec07f122 900 SMART SM00028 786 819 0.045 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD13_17010 bea853561249b91186cd994bec07f122 900 Pfam PF13424 Tetratricopeptide repeat 820 885 2.4E-9 T 17-10-2018 BJD13_17010 bea853561249b91186cd994bec07f122 900 Gene3D G3DSA:1.25.40.10 775 900 1.8E-25 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_07955 d768fc2033aee134f999b33bc94f6129 124 Pfam PF04430 Protein of unknown function (DUF498/DUF598) 20 120 2.2E-24 T 17-10-2018 IPR007523 NDUFAF3/Mth938 domain-containing protein BJD13_07955 d768fc2033aee134f999b33bc94f6129 124 Gene3D G3DSA:3.40.1230.10 2 124 4.2E-32 T 17-10-2018 IPR036748 MTH938-like superfamily BJD13_07955 d768fc2033aee134f999b33bc94f6129 124 SUPERFAMILY SSF64076 1 123 3.14E-31 T 17-10-2018 IPR036748 MTH938-like superfamily BJD13_10030 370fec25fec272b33dc0c675897779d7 295 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 162 1.9E-52 T 17-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 BJD13_10030 370fec25fec272b33dc0c675897779d7 295 Gene3D G3DSA:1.10.1040.10 165 295 5.4E-43 T 17-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BJD13_10030 370fec25fec272b33dc0c675897779d7 295 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 291 2.3E-33 T 17-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 BJD13_10030 370fec25fec272b33dc0c675897779d7 295 Gene3D G3DSA:3.40.50.720 1 164 3.7E-60 T 17-10-2018 BJD13_10030 370fec25fec272b33dc0c675897779d7 295 SUPERFAMILY SSF51735 1 162 2.06E-48 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_10030 370fec25fec272b33dc0c675897779d7 295 SUPERFAMILY SSF48179 163 293 8.73E-39 T 17-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BJD13_10030 370fec25fec272b33dc0c675897779d7 295 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 6 291 3.8E-122 T 17-10-2018 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|Reactome: R-HSA-70895 BJD13_10030 370fec25fec272b33dc0c675897779d7 295 PIRSF PIRSF000103 1 295 5.2E-82 T 17-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 BJD13_10030 370fec25fec272b33dc0c675897779d7 295 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 17-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 BJD13_07010 7d0129da91d2223d110de75d9649bf9d 404 Pfam PF01757 Acyltransferase family 5 368 5.2E-25 T 17-10-2018 IPR002656 Acyltransferase 3 GO:0016747 BJD13_17410 8c177b7298499584eff0e91629467c6a 182 Pfam PF13376 Bacteriocin-protection, YdeI or OmpD-Associated 101 157 4.2E-20 T 17-10-2018 BJD13_17410 8c177b7298499584eff0e91629467c6a 182 Pfam PF08922 Domain of unknown function (DUF1905) 9 90 3.7E-17 T 17-10-2018 IPR015018 Protein of unknown function DUF1905 BJD13_17410 8c177b7298499584eff0e91629467c6a 182 Gene3D G3DSA:2.40.30.100 5 93 1.9E-7 T 17-10-2018 IPR037079 AF2212/PG0164-like superfamily BJD13_17410 8c177b7298499584eff0e91629467c6a 182 SUPERFAMILY SSF141694 7 92 2.88E-19 T 17-10-2018 BJD13_21685 307c18454f834648cf79877db499ff2e 639 Pfam PF00128 Alpha amylase, catalytic domain 103 310 7.2E-33 T 17-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BJD13_21685 307c18454f834648cf79877db499ff2e 639 Gene3D G3DSA:2.60.40.1180 562 639 1.2E-37 T 17-10-2018 IPR013780 Glycosyl hydrolase, all-beta BJD13_21685 307c18454f834648cf79877db499ff2e 639 Gene3D G3DSA:1.10.1740.10 1 90 1.8E-46 T 17-10-2018 BJD13_21685 307c18454f834648cf79877db499ff2e 639 SUPERFAMILY SSF51011 566 636 5.76E-7 T 17-10-2018 BJD13_21685 307c18454f834648cf79877db499ff2e 639 SUPERFAMILY SSF51445 19 557 4.56E-97 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily BJD13_21685 307c18454f834648cf79877db499ff2e 639 Gene3D G3DSA:3.90.400.10 180 252 8.6E-195 T 17-10-2018 BJD13_21685 307c18454f834648cf79877db499ff2e 639 SMART SM00642 95 530 1.6E-28 T 17-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BJD13_21685 307c18454f834648cf79877db499ff2e 639 Gene3D G3DSA:3.20.20.80 94 551 8.6E-195 T 17-10-2018 BJD13_02990 5bef92b631d643c065e4406860137b92 527 SMART SM00257 478 523 7.6E-10 T 17-10-2018 IPR018392 LysM domain BJD13_02990 5bef92b631d643c065e4406860137b92 527 Gene3D G3DSA:3.10.350.10 465 525 3.8E-12 T 17-10-2018 IPR036779 LysM domain superfamily BJD13_02990 5bef92b631d643c065e4406860137b92 527 SUPERFAMILY SSF54106 477 522 1.96E-7 T 17-10-2018 BJD13_02990 5bef92b631d643c065e4406860137b92 527 Gene3D G3DSA:1.10.530.10 194 337 1.7E-31 T 17-10-2018 BJD13_02990 5bef92b631d643c065e4406860137b92 527 SUPERFAMILY SSF53955 195 341 2.09E-34 T 17-10-2018 IPR023346 Lysozyme-like domain superfamily BJD13_02990 5bef92b631d643c065e4406860137b92 527 Pfam PF01476 LysM domain 479 521 2.1E-10 T 17-10-2018 IPR018392 LysM domain BJD13_02990 5bef92b631d643c065e4406860137b92 527 Pfam PF01464 Transglycosylase SLT domain 198 305 3.3E-22 T 17-10-2018 IPR008258 Transglycosylase SLT domain 1 BJD13_03190 23e0e9ad6f233b059c109d9832a7bd36 500 Pfam PF00361 Proton-conducting membrane transporter 128 428 1.0E-77 T 17-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_03190 23e0e9ad6f233b059c109d9832a7bd36 500 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 233 257 5.9E-40 T 17-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_03190 23e0e9ad6f233b059c109d9832a7bd36 500 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 134 153 5.9E-40 T 17-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_03190 23e0e9ad6f233b059c109d9832a7bd36 500 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 385 411 5.9E-40 T 17-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_03190 23e0e9ad6f233b059c109d9832a7bd36 500 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 164 188 5.9E-40 T 17-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_03190 23e0e9ad6f233b059c109d9832a7bd36 500 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 7 494 4.4E-195 T 17-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_10840 9c19536af0c53688c12420dafd8f0f7f 289 SUPERFAMILY SSF53613 11 284 8.18E-58 T 17-10-2018 IPR029056 Ribokinase-like BJD13_10840 9c19536af0c53688c12420dafd8f0f7f 289 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 9 284 19.794 T 17-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 BJD13_10840 9c19536af0c53688c12420dafd8f0f7f 289 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 13 280 7.0E-51 T 17-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 BJD13_10840 9c19536af0c53688c12420dafd8f0f7f 289 Pfam PF01256 Carbohydrate kinase 32 275 1.5E-40 T 17-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 BJD13_10840 9c19536af0c53688c12420dafd8f0f7f 289 Gene3D G3DSA:3.40.1190.20 6 286 3.4E-68 T 17-10-2018 IPR029056 Ribokinase-like BJD13_01970 cef0cab27d0e6bdcce2b1cc00fc62626 152 TIGRFAM TIGR02944 suf_reg_Xantho: FeS assembly SUF system regulator 1 130 1.1E-62 T 17-10-2018 IPR014290 SUF system FeS cluster assembly regulator BJD13_01970 cef0cab27d0e6bdcce2b1cc00fc62626 152 Gene3D G3DSA:1.10.10.10 1 136 3.6E-36 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_01970 cef0cab27d0e6bdcce2b1cc00fc62626 152 Pfam PF02082 Transcriptional regulator 3 82 5.1E-22 T 17-10-2018 IPR000944 Transcription regulator Rrf2-type BJD13_01970 cef0cab27d0e6bdcce2b1cc00fc62626 152 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 3 131 1.4E-30 T 17-10-2018 IPR000944 Transcription regulator Rrf2-type BJD13_01970 cef0cab27d0e6bdcce2b1cc00fc62626 152 SUPERFAMILY SSF46785 3 133 1.37E-32 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_11110 1ccf508286e74c04855e5e5df718cde8 64 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 1.1E-19 T 17-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_11110 1ccf508286e74c04855e5e5df718cde8 64 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.784 T 17-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_11110 1ccf508286e74c04855e5e5df718cde8 64 Pfam PF01783 Ribosomal L32p protein family 2 55 1.1E-20 T 17-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_11110 1ccf508286e74c04855e5e5df718cde8 64 SUPERFAMILY SSF57829 2 54 4.7E-18 T 17-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 BJD13_07630 4899cc32c8e76af4220adadca07fb612 207 Gene3D G3DSA:3.40.50.300 3 190 2.0E-15 T 17-10-2018 BJD13_07630 4899cc32c8e76af4220adadca07fb612 207 SUPERFAMILY SSF52540 4 161 2.34E-11 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_06475 4755d88390cb47407354d9e829b4b931 137 Gene3D G3DSA:1.20.120.340 3 131 6.1E-40 T 17-10-2018 BJD13_06475 4755d88390cb47407354d9e829b4b931 137 TIGRFAM TIGR00208 fliS: flagellar protein FliS 12 126 2.9E-25 T 17-10-2018 IPR003713 Flagellar protein FliS GO:0044780 BJD13_06475 4755d88390cb47407354d9e829b4b931 137 SUPERFAMILY SSF101116 11 127 3.53E-34 T 17-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 BJD13_06475 4755d88390cb47407354d9e829b4b931 137 Pfam PF02561 Flagellar protein FliS 10 126 7.1E-35 T 17-10-2018 IPR003713 Flagellar protein FliS GO:0044780 BJD13_06475 4755d88390cb47407354d9e829b4b931 137 PIRSF PIRSF039090 3 137 2.9E-47 T 17-10-2018 IPR003713 Flagellar protein FliS GO:0044780 BJD13_12550 870037ed2799bbbf57113bd22cc3085a 199 SMART SM00382 5 189 1.6E-15 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_12550 870037ed2799bbbf57113bd22cc3085a 199 SUPERFAMILY SSF52540 1 195 3.42E-60 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_12550 870037ed2799bbbf57113bd22cc3085a 199 ProSitePatterns PS00211 ABC transporters family signature. 114 128 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD13_12550 870037ed2799bbbf57113bd22cc3085a 199 Pfam PF00005 ABC transporter 1 141 2.0E-30 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD13_12550 870037ed2799bbbf57113bd22cc3085a 199 Gene3D G3DSA:3.40.50.300 1 199 2.4E-63 T 17-10-2018 BJD13_23560 15ed08ca595bc5bb816ba20271cadce9 338 Pfam PF02685 Glucokinase 20 335 3.8E-101 T 17-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 BJD13_23560 15ed08ca595bc5bb816ba20271cadce9 338 SUPERFAMILY SSF53067 18 336 1.21E-50 T 17-10-2018 BJD13_23560 15ed08ca595bc5bb816ba20271cadce9 338 Gene3D G3DSA:3.40.367.20 120 319 6.5E-91 T 17-10-2018 BJD13_23560 15ed08ca595bc5bb816ba20271cadce9 338 Gene3D G3DSA:3.30.420.40 19 330 6.5E-91 T 17-10-2018 BJD13_03720 7122b92040de4b824de0a7666f6507ea 539 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 261 534 62.811 T 17-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 BJD13_03720 7122b92040de4b824de0a7666f6507ea 539 SUPERFAMILY SSF52540 285 529 3.55E-45 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_03720 7122b92040de4b824de0a7666f6507ea 539 SMART SM00962 333 534 3.5E-110 T 17-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BJD13_03720 7122b92040de4b824de0a7666f6507ea 539 Pfam PF02881 SRP54-type protein, helical bundle domain 250 312 4.0E-11 T 17-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BJD13_03720 7122b92040de4b824de0a7666f6507ea 539 Gene3D G3DSA:1.20.120.140 257 532 2.8E-104 T 17-10-2018 BJD13_03720 7122b92040de4b824de0a7666f6507ea 539 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 507 520 - T 17-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BJD13_03720 7122b92040de4b824de0a7666f6507ea 539 Gene3D G3DSA:3.40.50.300 329 522 2.8E-104 T 17-10-2018 BJD13_03720 7122b92040de4b824de0a7666f6507ea 539 Pfam PF00448 SRP54-type protein, GTPase domain 333 533 6.7E-73 T 17-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BJD13_03720 7122b92040de4b824de0a7666f6507ea 539 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 261 533 4.7E-100 T 17-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 BJD13_03720 7122b92040de4b824de0a7666f6507ea 539 SMART SM00382 332 512 1.5E-5 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_03720 7122b92040de4b824de0a7666f6507ea 539 SMART SM00963 239 318 3.4E-19 T 17-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BJD13_08575 1a5af0dbeccaea410730dbe3bcda2310 220 Gene3D G3DSA:3.40.1050.10 1 209 1.2E-80 T 17-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 BJD13_08575 1a5af0dbeccaea410730dbe3bcda2310 220 SUPERFAMILY SSF53056 1 211 7.46E-75 T 17-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 BJD13_08575 1a5af0dbeccaea410730dbe3bcda2310 220 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 17-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 BJD13_08575 1a5af0dbeccaea410730dbe3bcda2310 220 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 17-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 BJD13_08575 1a5af0dbeccaea410730dbe3bcda2310 220 SMART SM00947 30 193 1.6E-66 T 17-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 BJD13_08575 1a5af0dbeccaea410730dbe3bcda2310 220 Pfam PF00484 Carbonic anhydrase 37 188 9.8E-50 T 17-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 BJD13_21100 12dd0d73745b51402c2285af07873f6b 220 Pfam PF13417 Glutathione S-transferase, N-terminal domain 8 83 9.1E-12 T 17-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 BJD13_21100 12dd0d73745b51402c2285af07873f6b 220 SUPERFAMILY SSF47616 88 217 1.42E-30 T 17-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily BJD13_21100 12dd0d73745b51402c2285af07873f6b 220 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 7 218 6.1E-88 T 17-10-2018 IPR005955 Glutathione S-transferases, class Zeta GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-204174|Reactome: R-HSA-71182 BJD13_21100 12dd0d73745b51402c2285af07873f6b 220 Pfam PF13410 Glutathione S-transferase, C-terminal domain 135 182 6.4E-6 T 17-10-2018 BJD13_21100 12dd0d73745b51402c2285af07873f6b 220 Gene3D G3DSA:3.40.30.10 7 84 2.1E-21 T 17-10-2018 BJD13_21100 12dd0d73745b51402c2285af07873f6b 220 SUPERFAMILY SSF52833 5 110 2.2E-18 T 17-10-2018 IPR036249 Thioredoxin-like superfamily BJD13_21100 12dd0d73745b51402c2285af07873f6b 220 Gene3D G3DSA:1.20.1050.10 90 219 1.3E-51 T 17-10-2018 BJD13_21410 ae1bd956db93e274faf42c7a8890d984 627 Pfam PF00082 Subtilase family 186 489 1.0E-45 T 17-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 BJD13_21410 ae1bd956db93e274faf42c7a8890d984 627 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 191 202 - T 17-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site BJD13_21410 ae1bd956db93e274faf42c7a8890d984 627 Gene3D G3DSA:2.60.120.380 529 626 1.8E-15 T 17-10-2018 BJD13_21410 ae1bd956db93e274faf42c7a8890d984 627 Gene3D G3DSA:3.40.50.200 154 521 3.6E-94 T 17-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BJD13_21410 ae1bd956db93e274faf42c7a8890d984 627 PRINTS PR00723 Subtilisin serine protease family (S8) signature 254 267 4.5E-22 T 17-10-2018 IPR015500 Peptidase S8, subtilisin-related BJD13_21410 ae1bd956db93e274faf42c7a8890d984 627 PRINTS PR00723 Subtilisin serine protease family (S8) signature 445 461 4.5E-22 T 17-10-2018 IPR015500 Peptidase S8, subtilisin-related BJD13_21410 ae1bd956db93e274faf42c7a8890d984 627 PRINTS PR00723 Subtilisin serine protease family (S8) signature 186 205 4.5E-22 T 17-10-2018 IPR015500 Peptidase S8, subtilisin-related BJD13_21410 ae1bd956db93e274faf42c7a8890d984 627 SUPERFAMILY SSF52743 173 512 1.96E-71 T 17-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BJD13_21410 ae1bd956db93e274faf42c7a8890d984 627 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 446 456 - T 17-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site BJD13_04730 2ad25ba98cf9651999ea4e01ad8ed398 578 Gene3D G3DSA:3.40.50.300 367 575 2.1E-57 T 17-10-2018 BJD13_04730 2ad25ba98cf9651999ea4e01ad8ed398 578 SUPERFAMILY SSF52540 373 569 5.13E-49 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_04730 2ad25ba98cf9651999ea4e01ad8ed398 578 Gene3D G3DSA:1.20.1560.10 10 344 1.1E-33 T 17-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BJD13_04730 2ad25ba98cf9651999ea4e01ad8ed398 578 SMART SM00382 397 572 5.3E-17 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_04730 2ad25ba98cf9651999ea4e01ad8ed398 578 Pfam PF00005 ABC transporter 390 526 8.2E-25 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD13_04730 2ad25ba98cf9651999ea4e01ad8ed398 578 Pfam PF00664 ABC transporter transmembrane region 44 288 5.9E-17 T 17-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 BJD13_04730 2ad25ba98cf9651999ea4e01ad8ed398 578 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 41 568 4.7E-149 T 17-10-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 BJD13_04730 2ad25ba98cf9651999ea4e01ad8ed398 578 ProSitePatterns PS00211 ABC transporters family signature. 498 512 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD13_04730 2ad25ba98cf9651999ea4e01ad8ed398 578 SUPERFAMILY SSF90123 38 347 1.15E-39 T 17-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BJD13_12975 bd12262d242e35c00e1d350801416ebb 324 SUPERFAMILY SSF56042 140 307 2.69E-37 T 17-10-2018 IPR036676 PurM-like, C-terminal domain superfamily BJD13_12975 bd12262d242e35c00e1d350801416ebb 324 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 3 322 8.8E-105 T 17-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 BJD13_12975 bd12262d242e35c00e1d350801416ebb 324 Pfam PF02769 AIR synthase related protein, C-terminal domain 147 305 8.4E-12 T 17-10-2018 IPR010918 PurM-like, C-terminal domain BJD13_12975 bd12262d242e35c00e1d350801416ebb 324 PIRSF PIRSF005303 1 322 6.4E-83 T 17-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 BJD13_12975 bd12262d242e35c00e1d350801416ebb 324 Pfam PF00586 AIR synthase related protein, N-terminal domain 26 134 4.7E-22 T 17-10-2018 IPR016188 PurM-like, N-terminal domain BJD13_12975 bd12262d242e35c00e1d350801416ebb 324 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 1 322 26.875 T 17-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 BJD13_12975 bd12262d242e35c00e1d350801416ebb 324 Gene3D G3DSA:3.30.1330.10 1 141 1.5E-44 T 17-10-2018 IPR036921 PurM-like, N-terminal domain superfamily BJD13_12975 bd12262d242e35c00e1d350801416ebb 324 SUPERFAMILY SSF55326 3 134 1.33E-31 T 17-10-2018 IPR036921 PurM-like, N-terminal domain superfamily BJD13_12975 bd12262d242e35c00e1d350801416ebb 324 Gene3D G3DSA:3.90.650.10 143 323 2.3E-52 T 17-10-2018 IPR036676 PurM-like, C-terminal domain superfamily BJD13_12700 9150ad234d092463be4ce2e5fd910ea2 260 Pfam PF13649 Methyltransferase domain 45 136 1.3E-13 T 17-10-2018 BJD13_12700 9150ad234d092463be4ce2e5fd910ea2 260 SUPERFAMILY SSF53335 9 240 3.99E-33 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_12700 9150ad234d092463be4ce2e5fd910ea2 260 Gene3D G3DSA:3.40.50.150 10 246 1.1E-73 T 17-10-2018 BJD13_12700 9150ad234d092463be4ce2e5fd910ea2 260 Gene3D G3DSA:2.20.25.570 144 207 1.1E-73 T 17-10-2018 BJD13_05660 b3be0a66c63c9eba8d54db491ac51f51 102 Gene3D G3DSA:1.10.10.10 1 97 1.4E-22 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_05660 b3be0a66c63c9eba8d54db491ac51f51 102 SMART SM00418 10 88 2.3E-18 T 17-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BJD13_05660 b3be0a66c63c9eba8d54db491ac51f51 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 12 27 6.8E-6 T 17-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BJD13_05660 b3be0a66c63c9eba8d54db491ac51f51 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 44 59 6.8E-6 T 17-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BJD13_05660 b3be0a66c63c9eba8d54db491ac51f51 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 59 74 6.8E-6 T 17-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BJD13_05660 b3be0a66c63c9eba8d54db491ac51f51 102 Pfam PF01022 Bacterial regulatory protein, arsR family 18 61 3.3E-10 T 17-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BJD13_05660 b3be0a66c63c9eba8d54db491ac51f51 102 SUPERFAMILY SSF46785 5 92 1.2E-20 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_10655 74a2c03712135255e8a4bb156ac0cb62 241 SUPERFAMILY SSF46689 182 229 8.51E-13 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_10655 74a2c03712135255e8a4bb156ac0cb62 241 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 212 228 2.3E-7 T 17-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BJD13_10655 74a2c03712135255e8a4bb156ac0cb62 241 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 197 212 2.3E-7 T 17-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BJD13_10655 74a2c03712135255e8a4bb156ac0cb62 241 SUPERFAMILY SSF55785 9 118 3.84E-15 T 17-10-2018 IPR035965 PAS domain superfamily BJD13_10655 74a2c03712135255e8a4bb156ac0cb62 241 SMART SM00342 146 228 1.5E-23 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD13_10655 74a2c03712135255e8a4bb156ac0cb62 241 Pfam PF08448 PAS fold 13 119 9.7E-23 T 17-10-2018 IPR013656 PAS fold-4 BJD13_10655 74a2c03712135255e8a4bb156ac0cb62 241 Pfam PF12833 Helix-turn-helix domain 153 229 8.0E-23 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD13_10655 74a2c03712135255e8a4bb156ac0cb62 241 Gene3D G3DSA:1.10.10.60 129 234 7.3E-29 T 17-10-2018 BJD13_10655 74a2c03712135255e8a4bb156ac0cb62 241 SUPERFAMILY SSF46689 129 177 2.06E-6 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_10655 74a2c03712135255e8a4bb156ac0cb62 241 SMART SM00091 7 75 1.1E-4 T 17-10-2018 IPR000014 PAS domain BJD13_10655 74a2c03712135255e8a4bb156ac0cb62 241 Gene3D G3DSA:3.30.450.20 6 128 7.9E-18 T 17-10-2018 BJD13_10655 74a2c03712135255e8a4bb156ac0cb62 241 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 183 224 - T 17-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 BJD13_23925 9592aa770705c389d0b710ba51ffffb5 378 Gene3D G3DSA:3.90.1530.30 39 103 7.1E-15 T 17-10-2018 BJD13_23925 9592aa770705c389d0b710ba51ffffb5 378 Pfam PF06613 KorB C-terminal beta-barrel domain 318 376 6.0E-25 T 17-10-2018 IPR010575 KorB, C-terminal GO:0003677|GO:0045892 BJD13_23925 9592aa770705c389d0b710ba51ffffb5 378 Gene3D G3DSA:2.30.30.150 316 376 1.0E-23 T 17-10-2018 IPR037048 KorB, C-terminal domain superfamily GO:0003677|GO:0045892 BJD13_23925 9592aa770705c389d0b710ba51ffffb5 378 Gene3D G3DSA:1.10.10.730 107 161 4.8E-13 T 17-10-2018 BJD13_23925 9592aa770705c389d0b710ba51ffffb5 378 Pfam PF02195 ParB-like nuclease domain 28 104 3.2E-13 T 17-10-2018 IPR003115 ParB/Sulfiredoxin BJD13_23925 9592aa770705c389d0b710ba51ffffb5 378 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 27 196 3.9E-30 T 17-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 BJD13_23925 9592aa770705c389d0b710ba51ffffb5 378 SUPERFAMILY SSF50037 317 376 1.83E-19 T 17-10-2018 IPR008988 Transcriptional repressor, C-terminal BJD13_23925 9592aa770705c389d0b710ba51ffffb5 378 SMART SM00470 26 120 5.1E-12 T 17-10-2018 IPR003115 ParB/Sulfiredoxin BJD13_23925 9592aa770705c389d0b710ba51ffffb5 378 Pfam PF08535 KorB domain 135 222 1.4E-12 T 17-10-2018 IPR013741 Repressor KorB domain BJD13_23925 9592aa770705c389d0b710ba51ffffb5 378 SUPERFAMILY SSF109709 110 199 1.26E-13 T 17-10-2018 BJD13_23925 9592aa770705c389d0b710ba51ffffb5 378 SUPERFAMILY SSF110849 27 103 8.2E-14 T 17-10-2018 IPR036086 ParB/Sulfiredoxin superfamily BJD13_22035 169191ef490bef3ee074355a273e0e83 167 SUPERFAMILY SSF55298 30 167 2.04E-23 T 17-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 BJD13_22035 169191ef490bef3ee074355a273e0e83 167 Pfam PF01042 Endoribonuclease L-PSP 50 165 3.9E-16 T 17-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 BJD13_22035 169191ef490bef3ee074355a273e0e83 167 Gene3D G3DSA:3.30.1330.40 24 167 1.1E-25 T 17-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 BJD13_22035 169191ef490bef3ee074355a273e0e83 167 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 141 160 - T 17-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 BJD13_13515 2db934a45918e296e972bf149356538b 151 SUPERFAMILY SSF53927 7 148 9.2E-35 T 17-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 BJD13_13515 2db934a45918e296e972bf149356538b 151 Gene3D G3DSA:3.40.140.10 3 150 1.1E-33 T 17-10-2018 BJD13_13515 2db934a45918e296e972bf149356538b 151 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 8 102 3.3E-16 T 17-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain BJD13_10215 7681cdc0ccff9be9d72e34ef18933ec3 527 Gene3D G3DSA:2.60.40.1180 49 524 1.2E-185 T 17-10-2018 IPR013780 Glycosyl hydrolase, all-beta BJD13_10215 7681cdc0ccff9be9d72e34ef18933ec3 527 Pfam PF06964 Alpha-L-arabinofuranosidase C-terminal domain 330 520 2.1E-39 T 17-10-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 BJD13_10215 7681cdc0ccff9be9d72e34ef18933ec3 527 SMART SM00813 330 520 4.4E-85 T 17-10-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 BJD13_10215 7681cdc0ccff9be9d72e34ef18933ec3 527 SUPERFAMILY SSF51011 393 526 1.22E-27 T 17-10-2018 BJD13_10215 7681cdc0ccff9be9d72e34ef18933ec3 527 SUPERFAMILY SSF51445 51 412 5.76E-89 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily BJD13_10215 7681cdc0ccff9be9d72e34ef18933ec3 527 Gene3D G3DSA:3.20.20.80 52 412 1.2E-185 T 17-10-2018 BJD13_22305 1a14e930a5c45493c5bb2a1122f6e61c 239 Pfam PF01551 Peptidase family M23 121 227 2.9E-23 T 17-10-2018 IPR016047 Peptidase M23 BJD13_22305 1a14e930a5c45493c5bb2a1122f6e61c 239 Gene3D G3DSA:2.70.70.10 98 236 9.9E-44 T 17-10-2018 IPR011055 Duplicated hybrid motif BJD13_22305 1a14e930a5c45493c5bb2a1122f6e61c 239 SUPERFAMILY SSF51261 98 232 1.05E-31 T 17-10-2018 IPR011055 Duplicated hybrid motif BJD13_17065 f35d42cfc271b3e298f90c4576f01496 436 Gene3D G3DSA:1.20.1250.20 12 434 1.8E-78 T 17-10-2018 BJD13_17065 f35d42cfc271b3e298f90c4576f01496 436 Pfam PF07690 Major Facilitator Superfamily 285 428 1.2E-8 T 17-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD13_17065 f35d42cfc271b3e298f90c4576f01496 436 Pfam PF07690 Major Facilitator Superfamily 29 279 2.7E-36 T 17-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD13_17065 f35d42cfc271b3e298f90c4576f01496 436 SUPERFAMILY SSF103473 14 431 3.66E-83 T 17-10-2018 IPR036259 MFS transporter superfamily BJD13_03525 270b7eabe0424c7b80e171fb1629efea 331 Gene3D G3DSA:3.30.930.10 7 331 4.3E-118 T 17-10-2018 BJD13_03525 270b7eabe0424c7b80e171fb1629efea 331 SUPERFAMILY SSF55681 92 330 9.33E-79 T 17-10-2018 BJD13_03525 270b7eabe0424c7b80e171fb1629efea 331 Pfam PF01409 tRNA synthetases class II core domain (F) 92 330 5.1E-105 T 17-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 BJD13_03525 270b7eabe0424c7b80e171fb1629efea 331 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 164 330 2.1E-71 T 17-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 BJD13_03525 270b7eabe0424c7b80e171fb1629efea 331 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 2.5E-22 T 17-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 BJD13_03525 270b7eabe0424c7b80e171fb1629efea 331 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 330 48.72 T 17-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 BJD13_03525 270b7eabe0424c7b80e171fb1629efea 331 SUPERFAMILY SSF46589 12 99 2.67E-20 T 17-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 BJD13_07175 e3cc42056285310973cfd2f89ad17e86 206 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 13 206 35.47 T 17-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 BJD13_07175 e3cc42056285310973cfd2f89ad17e86 206 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 122 202 3.3E-11 T 17-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 BJD13_07175 e3cc42056285310973cfd2f89ad17e86 206 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 115 201 17.913 T 17-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 BJD13_07175 e3cc42056285310973cfd2f89ad17e86 206 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 119 198 5.9E-26 T 17-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 BJD13_07175 e3cc42056285310973cfd2f89ad17e86 206 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 61 110 1.0E-23 T 17-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 BJD13_07175 e3cc42056285310973cfd2f89ad17e86 206 SUPERFAMILY SSF141734 13 113 3.79E-43 T 17-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 BJD13_07175 e3cc42056285310973cfd2f89ad17e86 206 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 38 110 7.8E-31 T 17-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 BJD13_07175 e3cc42056285310973cfd2f89ad17e86 206 SUPERFAMILY SSF101386 117 205 3.92E-21 T 17-10-2018 BJD13_07175 e3cc42056285310973cfd2f89ad17e86 206 Gene3D G3DSA:1.10.287.1080 115 206 3.2E-25 T 17-10-2018 BJD13_07175 e3cc42056285310973cfd2f89ad17e86 206 Gene3D G3DSA:3.10.20.400 8 102 1.0E-34 T 17-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 BJD13_05025 c6b2cd9d96a0a0005105c99ca8ff2de2 102 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 8 90 1.6E-11 T 17-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 BJD13_05025 c6b2cd9d96a0a0005105c99ca8ff2de2 102 Gene3D G3DSA:3.10.20.30 1 102 4.0E-27 T 17-10-2018 IPR012675 Beta-grasp domain superfamily BJD13_05025 c6b2cd9d96a0a0005105c99ca8ff2de2 102 SUPERFAMILY SSF54292 3 98 2.94E-29 T 17-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 BJD13_05025 c6b2cd9d96a0a0005105c99ca8ff2de2 102 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 40 50 - T 17-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 BJD13_04025 234b3c2326bb11c87401b3e4a252fa16 435 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 58 289 8.2E-13 T 17-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BJD13_04025 234b3c2326bb11c87401b3e4a252fa16 435 Gene3D G3DSA:2.40.420.20 300 366 1.7E-96 T 17-10-2018 BJD13_04025 234b3c2326bb11c87401b3e4a252fa16 435 Gene3D G3DSA:2.40.30.170 46 299 1.7E-96 T 17-10-2018 BJD13_04025 234b3c2326bb11c87401b3e4a252fa16 435 SUPERFAMILY SSF111369 48 292 1.2E-69 T 17-10-2018 BJD13_04025 234b3c2326bb11c87401b3e4a252fa16 435 Gene3D G3DSA:2.40.50.100 59 203 1.7E-96 T 17-10-2018 BJD13_04025 234b3c2326bb11c87401b3e4a252fa16 435 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 35 367 4.3E-76 T 17-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 BJD13_04025 234b3c2326bb11c87401b3e4a252fa16 435 Gene3D G3DSA:1.10.287.470 94 167 1.7E-96 T 17-10-2018 BJD13_08375 549ee67a07aee1982d9113fa177bd6b9 186 Pfam PF05597 Poly(hydroxyalcanoate) granule associated protein (phasin) 20 142 2.6E-40 T 17-10-2018 IPR008769 Poly granule associated BJD13_08375 549ee67a07aee1982d9113fa177bd6b9 186 TIGRFAM TIGR01837 PHA_granule_1: poly(hydroxyalkanoate) granule-associated protein 28 144 1.3E-48 T 17-10-2018 IPR008769 Poly granule associated BJD13_05205 97cb26c4d4ad9ce5616ea417a29e5480 1133 SUPERFAMILY SSF55785 301 425 1.1E-22 T 17-10-2018 IPR035965 PAS domain superfamily BJD13_05205 97cb26c4d4ad9ce5616ea417a29e5480 1133 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 861 973 1.0E-25 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_05205 97cb26c4d4ad9ce5616ea417a29e5480 1133 Gene3D G3DSA:1.10.287.130 735 814 5.9E-20 T 17-10-2018 BJD13_05205 97cb26c4d4ad9ce5616ea417a29e5480 1133 Pfam PF01590 GAF domain 162 295 5.5E-11 T 17-10-2018 IPR003018 GAF domain GO:0005515 BJD13_05205 97cb26c4d4ad9ce5616ea417a29e5480 1133 Pfam PF08447 PAS fold 463 546 9.6E-20 T 17-10-2018 IPR013655 PAS fold-3 GO:0005515 BJD13_05205 97cb26c4d4ad9ce5616ea417a29e5480 1133 Gene3D G3DSA:3.40.50.2300 994 1129 3.0E-27 T 17-10-2018 BJD13_05205 97cb26c4d4ad9ce5616ea417a29e5480 1133 SMART SM00388 748 814 2.3E-15 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_05205 97cb26c4d4ad9ce5616ea417a29e5480 1133 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 311 435 7.7E-12 T 17-10-2018 IPR000014 PAS domain BJD13_05205 97cb26c4d4ad9ce5616ea417a29e5480 1133 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 436 559 2.2E-27 T 17-10-2018 IPR000014 PAS domain BJD13_05205 97cb26c4d4ad9ce5616ea417a29e5480 1133 Gene3D G3DSA:3.30.450.40 579 731 2.7E-17 T 17-10-2018 IPR029016 GAF-like domain superfamily BJD13_05205 97cb26c4d4ad9ce5616ea417a29e5480 1133 SUPERFAMILY SSF55781 597 728 2.62E-16 T 17-10-2018 BJD13_05205 97cb26c4d4ad9ce5616ea417a29e5480 1133 SMART SM00091 440 506 1.0E-11 T 17-10-2018 IPR000014 PAS domain BJD13_05205 97cb26c4d4ad9ce5616ea417a29e5480 1133 SMART SM00091 314 380 0.0089 T 17-10-2018 IPR000014 PAS domain BJD13_05205 97cb26c4d4ad9ce5616ea417a29e5480 1133 SMART SM00065 162 310 3.6E-12 T 17-10-2018 IPR003018 GAF domain GO:0005515 BJD13_05205 97cb26c4d4ad9ce5616ea417a29e5480 1133 SMART SM00065 572 729 4.3E-4 T 17-10-2018 IPR003018 GAF domain GO:0005515 BJD13_05205 97cb26c4d4ad9ce5616ea417a29e5480 1133 SMART SM00448 1003 1118 9.2E-23 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_05205 97cb26c4d4ad9ce5616ea417a29e5480 1133 Gene3D G3DSA:3.30.450.40 129 314 6.9E-22 T 17-10-2018 IPR029016 GAF-like domain superfamily BJD13_05205 97cb26c4d4ad9ce5616ea417a29e5480 1133 SUPERFAMILY SSF47384 736 814 1.12E-16 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD13_05205 97cb26c4d4ad9ce5616ea417a29e5480 1133 Gene3D G3DSA:3.30.565.10 815 975 2.4E-48 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_05205 97cb26c4d4ad9ce5616ea417a29e5480 1133 SUPERFAMILY SSF55785 425 552 2.58E-33 T 17-10-2018 IPR035965 PAS domain superfamily BJD13_05205 97cb26c4d4ad9ce5616ea417a29e5480 1133 Pfam PF00072 Response regulator receiver domain 1005 1118 7.2E-17 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_05205 97cb26c4d4ad9ce5616ea417a29e5480 1133 Pfam PF00512 His Kinase A (phospho-acceptor) domain 749 811 4.6E-13 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_05205 97cb26c4d4ad9ce5616ea417a29e5480 1133 Gene3D G3DSA:3.30.450.20 432 550 9.1E-35 T 17-10-2018 BJD13_05205 97cb26c4d4ad9ce5616ea417a29e5480 1133 SUPERFAMILY SSF55781 150 309 2.18E-23 T 17-10-2018 BJD13_05205 97cb26c4d4ad9ce5616ea417a29e5480 1133 SUPERFAMILY SSF52172 1002 1122 9.11E-28 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_05205 97cb26c4d4ad9ce5616ea417a29e5480 1133 Pfam PF13185 GAF domain 618 720 3.3E-9 T 17-10-2018 IPR003018 GAF domain GO:0005515 BJD13_05205 97cb26c4d4ad9ce5616ea417a29e5480 1133 Gene3D G3DSA:3.30.450.20 315 425 2.3E-23 T 17-10-2018 BJD13_05205 97cb26c4d4ad9ce5616ea417a29e5480 1133 Pfam PF08448 PAS fold 321 429 1.4E-11 T 17-10-2018 IPR013656 PAS fold-4 BJD13_05205 97cb26c4d4ad9ce5616ea417a29e5480 1133 PRINTS PR00344 Bacterial sensor protein C-terminal signature 933 951 2.1E-15 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_05205 97cb26c4d4ad9ce5616ea417a29e5480 1133 PRINTS PR00344 Bacterial sensor protein C-terminal signature 958 971 2.1E-15 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_05205 97cb26c4d4ad9ce5616ea417a29e5480 1133 PRINTS PR00344 Bacterial sensor protein C-terminal signature 898 912 2.1E-15 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_05205 97cb26c4d4ad9ce5616ea417a29e5480 1133 PRINTS PR00344 Bacterial sensor protein C-terminal signature 916 926 2.1E-15 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_05205 97cb26c4d4ad9ce5616ea417a29e5480 1133 SUPERFAMILY SSF55874 803 972 5.11E-48 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_05205 97cb26c4d4ad9ce5616ea417a29e5480 1133 SMART SM00086 512 554 1.6E-8 T 17-10-2018 IPR001610 PAC motif BJD13_05205 97cb26c4d4ad9ce5616ea417a29e5480 1133 SMART SM00086 386 428 3.1E-8 T 17-10-2018 IPR001610 PAC motif BJD13_05205 97cb26c4d4ad9ce5616ea417a29e5480 1133 SMART SM00387 861 974 1.3E-40 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_10130 43620b4d42d7b90fc77f41c48ed420b6 748 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 6 747 0.0 T 17-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 BJD13_10130 43620b4d42d7b90fc77f41c48ed420b6 748 Pfam PF00141 Peroxidase 71 407 5.9E-48 T 17-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 BJD13_10130 43620b4d42d7b90fc77f41c48ed420b6 748 Pfam PF00141 Peroxidase 414 721 2.2E-40 T 17-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 BJD13_10130 43620b4d42d7b90fc77f41c48ed420b6 748 Gene3D G3DSA:1.10.420.10 600 723 1.9E-154 T 17-10-2018 BJD13_10130 43620b4d42d7b90fc77f41c48ed420b6 748 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 20 42 2.0E-55 T 17-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 BJD13_10130 43620b4d42d7b90fc77f41c48ed420b6 748 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 492 518 2.0E-55 T 17-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 BJD13_10130 43620b4d42d7b90fc77f41c48ed420b6 748 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 61 86 2.0E-55 T 17-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 BJD13_10130 43620b4d42d7b90fc77f41c48ed420b6 748 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 46 59 2.0E-55 T 17-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 BJD13_10130 43620b4d42d7b90fc77f41c48ed420b6 748 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 279 302 2.0E-55 T 17-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 BJD13_10130 43620b4d42d7b90fc77f41c48ed420b6 748 SUPERFAMILY SSF48113 442 747 1.47E-118 T 17-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 BJD13_10130 43620b4d42d7b90fc77f41c48ed420b6 748 Hamap MF_01961 Catalase-peroxidase [katG]. 2 748 42.73 T 17-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 BJD13_10130 43620b4d42d7b90fc77f41c48ed420b6 748 ProSitePatterns PS00436 Peroxidases active site signature. 84 95 - T 17-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 BJD13_10130 43620b4d42d7b90fc77f41c48ed420b6 748 SUPERFAMILY SSF48113 16 440 5.38E-148 T 17-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 BJD13_10130 43620b4d42d7b90fc77f41c48ed420b6 748 Gene3D G3DSA:1.10.520.10 15 442 4.1E-225 T 17-10-2018 BJD13_10130 43620b4d42d7b90fc77f41c48ed420b6 748 ProSitePatterns PS00435 Peroxidases proximal heme-ligand signature. 271 281 - T 17-10-2018 IPR019793 Peroxidases heam-ligand binding site Reactome: R-HSA-2408557 BJD13_10130 43620b4d42d7b90fc77f41c48ed420b6 748 Gene3D G3DSA:1.10.520.10 444 747 1.9E-154 T 17-10-2018 BJD13_10130 43620b4d42d7b90fc77f41c48ed420b6 748 Gene3D G3DSA:1.10.420.20 185 409 4.1E-225 T 17-10-2018 BJD13_10130 43620b4d42d7b90fc77f41c48ed420b6 748 PRINTS PR00458 Haem peroxidase superfamily signature 162 174 1.2E-12 T 17-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 BJD13_10130 43620b4d42d7b90fc77f41c48ed420b6 748 PRINTS PR00458 Haem peroxidase superfamily signature 84 98 1.2E-12 T 17-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 BJD13_10130 43620b4d42d7b90fc77f41c48ed420b6 748 PRINTS PR00458 Haem peroxidase superfamily signature 144 161 1.2E-12 T 17-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 BJD13_10130 43620b4d42d7b90fc77f41c48ed420b6 748 PRINTS PR00458 Haem peroxidase superfamily signature 330 345 1.2E-12 T 17-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 BJD13_19555 de9d6157cdecfd7015ed137d8e2618be 298 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 6 291 8.0E-88 T 17-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 BJD13_19555 de9d6157cdecfd7015ed137d8e2618be 298 Pfam PF01040 UbiA prenyltransferase family 21 266 1.4E-54 T 17-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 BJD13_19555 de9d6157cdecfd7015ed137d8e2618be 298 Gene3D G3DSA:1.10.357.140 13 172 3.6E-18 T 17-10-2018 BJD13_19555 de9d6157cdecfd7015ed137d8e2618be 298 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 4 292 19.301 T 17-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 BJD13_19555 de9d6157cdecfd7015ed137d8e2618be 298 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 62 84 - T 17-10-2018 IPR030470 UbiA prenyltransferase conserved site BJD13_10165 9e27e788e8e5ec4d20410df677321bbc 252 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 252 102.937 T 17-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 BJD13_10165 9e27e788e8e5ec4d20410df677321bbc 252 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 229 4.9E-82 T 17-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 BJD13_10165 9e27e788e8e5ec4d20410df677321bbc 252 SUPERFAMILY SSF75217 2 248 9.81E-92 T 17-10-2018 IPR029028 Alpha/beta knot methyltransferases BJD13_10165 9e27e788e8e5ec4d20410df677321bbc 252 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 223 1.8E-56 T 17-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 BJD13_10165 9e27e788e8e5ec4d20410df677321bbc 252 PIRSF PIRSF000386 1 250 1.3E-87 T 17-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 BJD13_10165 9e27e788e8e5ec4d20410df677321bbc 252 Gene3D G3DSA:1.10.1270.20 166 252 2.5E-27 T 17-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 BJD13_10165 9e27e788e8e5ec4d20410df677321bbc 252 Gene3D G3DSA:3.40.1280.10 1 165 7.1E-59 T 17-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BJD13_19805 2823bb49be3094910c29cf37ff0ed30d 291 PRINTS PR00046 Major sigma-70 factor signature 84 97 3.3E-19 T 17-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BJD13_19805 2823bb49be3094910c29cf37ff0ed30d 291 PRINTS PR00046 Major sigma-70 factor signature 239 251 3.3E-19 T 17-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BJD13_19805 2823bb49be3094910c29cf37ff0ed30d 291 PRINTS PR00046 Major sigma-70 factor signature 259 274 3.3E-19 T 17-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BJD13_19805 2823bb49be3094910c29cf37ff0ed30d 291 PRINTS PR00046 Major sigma-70 factor signature 274 285 3.3E-19 T 17-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BJD13_19805 2823bb49be3094910c29cf37ff0ed30d 291 PIRSF PIRSF000770 16 291 2.5E-34 T 17-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BJD13_19805 2823bb49be3094910c29cf37ff0ed30d 291 Pfam PF00140 Sigma-70 factor, region 1.2 22 53 3.4E-5 T 17-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BJD13_19805 2823bb49be3094910c29cf37ff0ed30d 291 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 8 291 54.057 T 17-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 BJD13_19805 2823bb49be3094910c29cf37ff0ed30d 291 Gene3D G3DSA:1.10.10.10 215 288 2.3E-14 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_19805 2823bb49be3094910c29cf37ff0ed30d 291 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 21 289 5.4E-126 T 17-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 BJD13_19805 2823bb49be3094910c29cf37ff0ed30d 291 Pfam PF04545 Sigma-70, region 4 236 286 1.2E-14 T 17-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 BJD13_19805 2823bb49be3094910c29cf37ff0ed30d 291 SUPERFAMILY SSF88659 208 288 6.35E-16 T 17-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BJD13_19805 2823bb49be3094910c29cf37ff0ed30d 291 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 84 97 - T 17-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BJD13_19805 2823bb49be3094910c29cf37ff0ed30d 291 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 259 285 - T 17-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BJD13_19805 2823bb49be3094910c29cf37ff0ed30d 291 Gene3D G3DSA:1.10.601.10 16 132 6.9E-29 T 17-10-2018 BJD13_19805 2823bb49be3094910c29cf37ff0ed30d 291 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 55 286 7.5E-31 T 17-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BJD13_19805 2823bb49be3094910c29cf37ff0ed30d 291 SUPERFAMILY SSF88946 22 129 4.24E-38 T 17-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BJD13_19805 2823bb49be3094910c29cf37ff0ed30d 291 Pfam PF04542 Sigma-70 region 2 60 129 2.6E-16 T 17-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BJD13_18700 32fd18ff8805e5746517e803a6409f93 832 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 207 290 6.5E-15 T 17-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BJD13_18700 32fd18ff8805e5746517e803a6409f93 832 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 211 819 1.4E-166 T 17-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BJD13_18700 32fd18ff8805e5746517e803a6409f93 832 SUPERFAMILY SSF48168 71 292 7.59E-49 T 17-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BJD13_18700 32fd18ff8805e5746517e803a6409f93 832 Pfam PF02867 Ribonucleotide reductase, barrel domain 294 816 1.5E-144 T 17-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BJD13_18700 32fd18ff8805e5746517e803a6409f93 832 PRINTS PR01183 Ribonucleotide reductase large chain signature 573 596 1.7E-37 T 17-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BJD13_18700 32fd18ff8805e5746517e803a6409f93 832 PRINTS PR01183 Ribonucleotide reductase large chain signature 639 662 1.7E-37 T 17-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BJD13_18700 32fd18ff8805e5746517e803a6409f93 832 PRINTS PR01183 Ribonucleotide reductase large chain signature 700 727 1.7E-37 T 17-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BJD13_18700 32fd18ff8805e5746517e803a6409f93 832 PRINTS PR01183 Ribonucleotide reductase large chain signature 369 388 1.7E-37 T 17-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BJD13_18700 32fd18ff8805e5746517e803a6409f93 832 PRINTS PR01183 Ribonucleotide reductase large chain signature 512 523 1.7E-37 T 17-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BJD13_18700 32fd18ff8805e5746517e803a6409f93 832 PRINTS PR01183 Ribonucleotide reductase large chain signature 611 633 1.7E-37 T 17-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BJD13_18700 32fd18ff8805e5746517e803a6409f93 832 SUPERFAMILY SSF51998 293 821 1.16E-162 T 17-10-2018 BJD13_18700 32fd18ff8805e5746517e803a6409f93 832 Gene3D G3DSA:3.20.70.20 138 825 1.1E-193 T 17-10-2018 BJD13_18700 32fd18ff8805e5746517e803a6409f93 832 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 689 711 - T 17-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BJD13_20910 9336ab53b7ea4441ea4b26f56cddd056 287 Gene3D G3DSA:1.10.287.80 6 283 1.5E-108 T 17-10-2018 BJD13_20910 9336ab53b7ea4441ea4b26f56cddd056 287 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 287 36.699 T 17-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD13_20910 9336ab53b7ea4441ea4b26f56cddd056 287 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 273 286 - T 17-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD13_20910 9336ab53b7ea4441ea4b26f56cddd056 287 PRINTS PR00126 ATP synthase gamma subunit signature 74 93 6.2E-38 T 17-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD13_20910 9336ab53b7ea4441ea4b26f56cddd056 287 PRINTS PR00126 ATP synthase gamma subunit signature 167 184 6.2E-38 T 17-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD13_20910 9336ab53b7ea4441ea4b26f56cddd056 287 PRINTS PR00126 ATP synthase gamma subunit signature 265 286 6.2E-38 T 17-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD13_20910 9336ab53b7ea4441ea4b26f56cddd056 287 PRINTS PR00126 ATP synthase gamma subunit signature 234 253 6.2E-38 T 17-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD13_20910 9336ab53b7ea4441ea4b26f56cddd056 287 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 287 8.1E-106 T 17-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD13_20910 9336ab53b7ea4441ea4b26f56cddd056 287 Gene3D G3DSA:3.40.1380.10 61 206 1.5E-108 T 17-10-2018 BJD13_20910 9336ab53b7ea4441ea4b26f56cddd056 287 Pfam PF00231 ATP synthase 5 286 6.2E-97 T 17-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD13_20910 9336ab53b7ea4441ea4b26f56cddd056 287 SUPERFAMILY SSF52943 3 287 1.7E-93 T 17-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD13_07105 0edd58aadaf83f80daf4952de667e909 188 SUPERFAMILY SSF50104 2 63 1.87E-9 T 17-10-2018 IPR008991 Translation protein SH3-like domain superfamily BJD13_07105 0edd58aadaf83f80daf4952de667e909 188 Gene3D G3DSA:2.40.50.140 130 187 2.4E-21 T 17-10-2018 BJD13_07105 0edd58aadaf83f80daf4952de667e909 188 SUPERFAMILY SSF50249 130 187 2.06E-15 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD13_07105 0edd58aadaf83f80daf4952de667e909 188 SMART SM00841 131 186 1.7E-24 T 17-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 BJD13_07105 0edd58aadaf83f80daf4952de667e909 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 2 60 7.0E-13 T 17-10-2018 IPR013185 Translation elongation factor, KOW-like BJD13_07105 0edd58aadaf83f80daf4952de667e909 188 Gene3D G3DSA:2.30.30.30 1 63 1.2E-8 T 17-10-2018 IPR014722 Ribosomal protein L2, domain 2 BJD13_07105 0edd58aadaf83f80daf4952de667e909 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 17-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site BJD13_07105 0edd58aadaf83f80daf4952de667e909 188 PIRSF PIRSF005901 1 188 2.3E-61 T 17-10-2018 IPR020599 Translation elongation factor P/YeiP BJD13_07105 0edd58aadaf83f80daf4952de667e909 188 SUPERFAMILY SSF50249 68 128 3.26E-12 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD13_07105 0edd58aadaf83f80daf4952de667e909 188 SMART SM01185 68 123 2.6E-15 T 17-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 BJD13_07105 0edd58aadaf83f80daf4952de667e909 188 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 1 187 39.0 T 17-10-2018 IPR011897 Translation elongation factor P-like, YeiP BJD13_07105 0edd58aadaf83f80daf4952de667e909 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 70 123 2.6E-13 T 17-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 BJD13_07105 0edd58aadaf83f80daf4952de667e909 188 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 2 187 2.4E-85 T 17-10-2018 IPR011897 Translation elongation factor P-like, YeiP BJD13_07105 0edd58aadaf83f80daf4952de667e909 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 1.6E-20 T 17-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 BJD13_07105 0edd58aadaf83f80daf4952de667e909 188 Gene3D G3DSA:2.40.50.140 66 128 8.4E-16 T 17-10-2018 BJD13_19470 42dda4a83a875530d44fe5431f57c1ef 472 Pfam PF01551 Peptidase family M23 325 421 1.4E-33 T 17-10-2018 IPR016047 Peptidase M23 BJD13_19470 42dda4a83a875530d44fe5431f57c1ef 472 Gene3D G3DSA:2.70.70.10 298 427 1.5E-87 T 17-10-2018 IPR011055 Duplicated hybrid motif BJD13_19470 42dda4a83a875530d44fe5431f57c1ef 472 SUPERFAMILY SSF51261 177 423 1.15E-71 T 17-10-2018 IPR011055 Duplicated hybrid motif BJD13_19470 42dda4a83a875530d44fe5431f57c1ef 472 Gene3D G3DSA:3.10.450.350 200 442 1.5E-87 T 17-10-2018 BJD13_19470 42dda4a83a875530d44fe5431f57c1ef 472 Gene3D G3DSA:3.10.450.350 91 182 3.4E-11 T 17-10-2018 BJD13_19470 42dda4a83a875530d44fe5431f57c1ef 472 Pfam PF04225 Opacity-associated protein A LysM-like domain 101 168 3.4E-6 T 17-10-2018 IPR007340 Opacity-associated protein A BJD13_12915 9263e3ac41f0e744c51a12a69435dcbc 465 SUPERFAMILY SSF55103 192 459 8.5E-65 T 17-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 BJD13_12915 9263e3ac41f0e744c51a12a69435dcbc 465 Gene3D G3DSA:3.30.70.2740 336 417 2.5E-17 T 17-10-2018 BJD13_12915 9263e3ac41f0e744c51a12a69435dcbc 465 Pfam PF02913 FAD linked oxidases, C-terminal domain 225 457 1.9E-67 T 17-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 BJD13_12915 9263e3ac41f0e744c51a12a69435dcbc 465 Gene3D G3DSA:3.30.465.40 21 230 1.8E-74 T 17-10-2018 BJD13_12915 9263e3ac41f0e744c51a12a69435dcbc 465 Pfam PF01565 FAD binding domain 43 182 5.5E-44 T 17-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 BJD13_12915 9263e3ac41f0e744c51a12a69435dcbc 465 SUPERFAMILY SSF56176 9 217 2.9E-71 T 17-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 BJD13_12915 9263e3ac41f0e744c51a12a69435dcbc 465 Gene3D G3DSA:1.10.45.10 418 458 3.8E-17 T 17-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 BJD13_00715 d12f169f71d8e0b8ef9945f80f4321f0 300 Pfam PF13728 F plasmid transfer operon protein 7 226 1.9E-60 T 17-10-2018 IPR039555 F plasmid transfer operon protein BJD13_00715 d12f169f71d8e0b8ef9945f80f4321f0 300 Gene3D G3DSA:3.40.30.10 102 223 5.1E-6 T 17-10-2018 BJD13_00715 d12f169f71d8e0b8ef9945f80f4321f0 300 SUPERFAMILY SSF52833 128 224 1.39E-9 T 17-10-2018 IPR036249 Thioredoxin-like superfamily BJD13_04460 e8e7631b650ae64fbe63b3fa25c330d9 518 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 31 484 2.5E-132 T 17-10-2018 IPR003846 Uncharacterised protein family UPF0061 BJD13_04460 e8e7631b650ae64fbe63b3fa25c330d9 518 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 2 500 45.199 T 17-10-2018 IPR003846 Uncharacterised protein family UPF0061 BJD13_14805 37ed35b46d767cdba4224888a66f65d3 807 Pfam PF12607 Protein of unknown function (DUF3772) 120 181 3.3E-16 T 17-10-2018 IPR022249 Domain of unknown function DUF3772 BJD13_14805 37ed35b46d767cdba4224888a66f65d3 807 SUPERFAMILY SSF82689 690 783 1.83E-14 T 17-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 BJD13_14805 37ed35b46d767cdba4224888a66f65d3 807 Gene3D G3DSA:3.30.70.100 690 783 4.9E-12 T 17-10-2018 BJD13_14805 37ed35b46d767cdba4224888a66f65d3 807 Pfam PF00924 Mechanosensitive ion channel 580 776 1.0E-43 T 17-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 BJD13_14805 37ed35b46d767cdba4224888a66f65d3 807 SUPERFAMILY SSF50182 624 688 3.92E-15 T 17-10-2018 IPR010920 LSM domain superfamily BJD13_14805 37ed35b46d767cdba4224888a66f65d3 807 Gene3D G3DSA:2.30.30.60 638 687 4.2E-11 T 17-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily BJD13_14805 37ed35b46d767cdba4224888a66f65d3 807 SUPERFAMILY SSF82861 539 621 3.92E-12 T 17-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 BJD13_08990 01f6704696e1f889d9f410e9da6905da 562 Gene3D G3DSA:1.20.1560.10 15 326 8.2E-25 T 17-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BJD13_08990 01f6704696e1f889d9f410e9da6905da 562 SUPERFAMILY SSF52540 374 528 3.22E-16 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_08990 01f6704696e1f889d9f410e9da6905da 562 SUPERFAMILY SSF90123 14 325 2.09E-32 T 17-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BJD13_08990 01f6704696e1f889d9f410e9da6905da 562 Gene3D G3DSA:3.40.50.300 351 560 8.3E-17 T 17-10-2018 BJD13_22695 bab2a05d26a9596cd41be5b3b79f12fe 420 Gene3D G3DSA:1.20.81.30 272 383 1.8E-27 T 17-10-2018 BJD13_22695 bab2a05d26a9596cd41be5b3b79f12fe 420 Gene3D G3DSA:1.20.81.30 72 187 3.9E-29 T 17-10-2018 BJD13_22695 bab2a05d26a9596cd41be5b3b79f12fe 420 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 180 208 - T 17-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 BJD13_22695 bab2a05d26a9596cd41be5b3b79f12fe 420 Pfam PF00482 Type II secretion system (T2SS), protein F 85 208 2.4E-30 T 17-10-2018 IPR018076 Type II secretion system F domain BJD13_22695 bab2a05d26a9596cd41be5b3b79f12fe 420 Pfam PF00482 Type II secretion system (T2SS), protein F 289 411 6.5E-30 T 17-10-2018 IPR018076 Type II secretion system F domain BJD13_22695 bab2a05d26a9596cd41be5b3b79f12fe 420 PRINTS PR00812 Bacterial general secretion pathway protein F signature 81 93 4.0E-17 T 17-10-2018 IPR003004 GspF/PilC family BJD13_22695 bab2a05d26a9596cd41be5b3b79f12fe 420 PRINTS PR00812 Bacterial general secretion pathway protein F signature 180 208 4.0E-17 T 17-10-2018 IPR003004 GspF/PilC family BJD13_22695 bab2a05d26a9596cd41be5b3b79f12fe 420 PRINTS PR00812 Bacterial general secretion pathway protein F signature 384 398 4.0E-17 T 17-10-2018 IPR003004 GspF/PilC family BJD13_22695 bab2a05d26a9596cd41be5b3b79f12fe 420 PRINTS PR00812 Bacterial general secretion pathway protein F signature 400 419 4.0E-17 T 17-10-2018 IPR003004 GspF/PilC family BJD13_22535 81351a6a625fd6d0b826ea03b61e5aa2 189 Pfam PF13302 Acetyltransferase (GNAT) domain 13 148 4.0E-19 T 17-10-2018 IPR000182 GNAT domain BJD13_22535 81351a6a625fd6d0b826ea03b61e5aa2 189 Gene3D G3DSA:3.40.630.30 2 176 6.8E-35 T 17-10-2018 BJD13_22535 81351a6a625fd6d0b826ea03b61e5aa2 189 SUPERFAMILY SSF55729 4 173 1.8E-35 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD13_09850 978109ac77cbe5f13a7055fe50673deb 945 PRINTS PR00723 Subtilisin serine protease family (S8) signature 127 140 4.1E-14 T 17-10-2018 IPR015500 Peptidase S8, subtilisin-related BJD13_09850 978109ac77cbe5f13a7055fe50673deb 945 PRINTS PR00723 Subtilisin serine protease family (S8) signature 86 105 4.1E-14 T 17-10-2018 IPR015500 Peptidase S8, subtilisin-related BJD13_09850 978109ac77cbe5f13a7055fe50673deb 945 PRINTS PR00723 Subtilisin serine protease family (S8) signature 323 339 4.1E-14 T 17-10-2018 IPR015500 Peptidase S8, subtilisin-related BJD13_09850 978109ac77cbe5f13a7055fe50673deb 945 SUPERFAMILY SSF103515 644 945 1.15E-36 T 17-10-2018 IPR036709 Autotransporter beta-domain superfamily BJD13_09850 978109ac77cbe5f13a7055fe50673deb 945 SMART SM00869 679 935 7.2E-26 T 17-10-2018 IPR005546 Autotransporter beta-domain BJD13_09850 978109ac77cbe5f13a7055fe50673deb 945 Pfam PF03797 Autotransporter beta-domain 683 925 4.8E-33 T 17-10-2018 IPR005546 Autotransporter beta-domain BJD13_09850 978109ac77cbe5f13a7055fe50673deb 945 Pfam PF12951 Passenger-associated-transport-repeat 414 443 3.3E-8 T 17-10-2018 IPR013425 Autotransporter-associated beta strand repeat BJD13_09850 978109ac77cbe5f13a7055fe50673deb 945 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 91 102 - T 17-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site BJD13_09850 978109ac77cbe5f13a7055fe50673deb 945 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 324 334 - T 17-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site BJD13_09850 978109ac77cbe5f13a7055fe50673deb 945 SUPERFAMILY SSF52743 68 384 2.75E-58 T 17-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BJD13_09850 978109ac77cbe5f13a7055fe50673deb 945 Gene3D G3DSA:2.40.128.130 636 945 1.0E-42 T 17-10-2018 IPR036709 Autotransporter beta-domain superfamily BJD13_09850 978109ac77cbe5f13a7055fe50673deb 945 Pfam PF00082 Subtilase family 86 374 4.9E-35 T 17-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 BJD13_09850 978109ac77cbe5f13a7055fe50673deb 945 Gene3D G3DSA:3.40.50.200 43 384 1.2E-63 T 17-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BJD13_09850 978109ac77cbe5f13a7055fe50673deb 945 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 413 443 3.6E-11 T 17-10-2018 IPR013425 Autotransporter-associated beta strand repeat BJD13_01480 52539576bc31b7dbf7748e9583fb6761 111 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 14 103 8.6E-28 T 17-10-2018 IPR009241 Toxin HigB-like BJD13_05265 8c00751f771e40dadb940cb0a99fd2ba 1028 Gene3D G3DSA:3.30.2090.10 179 267 1.3E-260 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_05265 8c00751f771e40dadb940cb0a99fd2ba 1028 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 5.5E-36 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_05265 8c00751f771e40dadb940cb0a99fd2ba 1028 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 5.5E-36 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_05265 8c00751f771e40dadb940cb0a99fd2ba 1028 PRINTS PR00702 Acriflavin resistance protein family signature 327 350 5.5E-36 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_05265 8c00751f771e40dadb940cb0a99fd2ba 1028 PRINTS PR00702 Acriflavin resistance protein family signature 382 406 5.5E-36 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_05265 8c00751f771e40dadb940cb0a99fd2ba 1028 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 5.5E-36 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_05265 8c00751f771e40dadb940cb0a99fd2ba 1028 PRINTS PR00702 Acriflavin resistance protein family signature 354 375 5.5E-36 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_05265 8c00751f771e40dadb940cb0a99fd2ba 1028 SUPERFAMILY SSF82693 146 306 1.94E-10 T 17-10-2018 BJD13_05265 8c00751f771e40dadb940cb0a99fd2ba 1028 Gene3D G3DSA:3.30.70.1430 40 787 1.3E-260 T 17-10-2018 BJD13_05265 8c00751f771e40dadb940cb0a99fd2ba 1028 SUPERFAMILY SSF82693 40 135 2.46E-17 T 17-10-2018 BJD13_05265 8c00751f771e40dadb940cb0a99fd2ba 1028 Gene3D G3DSA:1.20.1640.10 498 996 1.3E-260 T 17-10-2018 BJD13_05265 8c00751f771e40dadb940cb0a99fd2ba 1028 SUPERFAMILY SSF82714 692 774 3.01E-14 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_05265 8c00751f771e40dadb940cb0a99fd2ba 1028 Gene3D G3DSA:3.30.2090.10 691 779 1.3E-260 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_05265 8c00751f771e40dadb940cb0a99fd2ba 1028 Pfam PF00873 AcrB/AcrD/AcrF family 4 999 2.8E-198 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_05265 8c00751f771e40dadb940cb0a99fd2ba 1028 SUPERFAMILY SSF82866 776 1001 1.96E-47 T 17-10-2018 BJD13_05265 8c00751f771e40dadb940cb0a99fd2ba 1028 SUPERFAMILY SSF82866 293 487 4.19E-33 T 17-10-2018 BJD13_05265 8c00751f771e40dadb940cb0a99fd2ba 1028 Gene3D G3DSA:3.30.70.1440 642 839 1.3E-260 T 17-10-2018 BJD13_05265 8c00751f771e40dadb940cb0a99fd2ba 1028 Gene3D G3DSA:3.30.70.1320 135 321 1.3E-260 T 17-10-2018 BJD13_05265 8c00751f771e40dadb940cb0a99fd2ba 1028 Gene3D G3DSA:1.20.1640.10 10 497 1.3E-260 T 17-10-2018 BJD13_05265 8c00751f771e40dadb940cb0a99fd2ba 1028 Gene3D G3DSA:3.30.70.1430 552 641 1.3E-260 T 17-10-2018 BJD13_05265 8c00751f771e40dadb940cb0a99fd2ba 1028 SUPERFAMILY SSF82714 183 260 2.35E-10 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_22230 0b08915c688994ad89c3ab7b8eddfc75 352 Pfam PF11104 Type IV pilus assembly protein PilM; 13 351 6.6E-135 T 17-10-2018 IPR005883 Type IV pilus assembly protein PilM BJD13_22230 0b08915c688994ad89c3ab7b8eddfc75 352 PIRSF PIRSF019169 1 352 1.3E-129 T 17-10-2018 IPR005883 Type IV pilus assembly protein PilM BJD13_22230 0b08915c688994ad89c3ab7b8eddfc75 352 SUPERFAMILY SSF53067 59 173 1.78E-8 T 17-10-2018 BJD13_22230 0b08915c688994ad89c3ab7b8eddfc75 352 SUPERFAMILY SSF53067 190 350 5.5E-24 T 17-10-2018 BJD13_22230 0b08915c688994ad89c3ab7b8eddfc75 352 Gene3D G3DSA:3.30.420.40 188 315 2.3E-86 T 17-10-2018 BJD13_22230 0b08915c688994ad89c3ab7b8eddfc75 352 Gene3D G3DSA:3.30.1490.300 87 146 2.3E-86 T 17-10-2018 BJD13_22230 0b08915c688994ad89c3ab7b8eddfc75 352 Gene3D G3DSA:3.30.420.40 12 349 2.3E-86 T 17-10-2018 BJD13_22230 0b08915c688994ad89c3ab7b8eddfc75 352 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 8 351 3.6E-141 T 17-10-2018 IPR005883 Type IV pilus assembly protein PilM BJD13_21245 cee154c473f99e1acdefb40d38e2f629 549 Pfam PF01946 Thi4 family 17 64 5.6E-7 T 17-10-2018 BJD13_21245 cee154c473f99e1acdefb40d38e2f629 549 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 447 547 2.0E-43 T 17-10-2018 BJD13_21245 cee154c473f99e1acdefb40d38e2f629 549 SUPERFAMILY SSF54862 450 548 2.2E-24 T 17-10-2018 BJD13_21245 cee154c473f99e1acdefb40d38e2f629 549 SUPERFAMILY SSF51905 18 405 8.9E-43 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_21245 cee154c473f99e1acdefb40d38e2f629 549 SUPERFAMILY SSF54373 218 311 3.02E-31 T 17-10-2018 BJD13_21245 cee154c473f99e1acdefb40d38e2f629 549 Gene3D G3DSA:3.30.70.20 448 544 1.7E-35 T 17-10-2018 BJD13_21245 cee154c473f99e1acdefb40d38e2f629 549 Gene3D G3DSA:3.50.50.60 20 385 2.0E-158 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_21245 cee154c473f99e1acdefb40d38e2f629 549 Gene3D G3DSA:3.30.9.90 88 434 2.0E-158 T 17-10-2018 BJD13_23725 abe6d9a081b57524d68bf1c3f58f2916 460 SUPERFAMILY SSF143548 17 158 2.12E-44 T 17-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 BJD13_23725 abe6d9a081b57524d68bf1c3f58f2916 460 Gene3D G3DSA:3.30.1330.90 11 162 1.6E-56 T 17-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 BJD13_23725 abe6d9a081b57524d68bf1c3f58f2916 460 Pfam PF03313 Serine dehydratase alpha chain 189 454 2.1E-105 T 17-10-2018 IPR005130 Serine dehydratase-like, alpha subunit BJD13_23725 abe6d9a081b57524d68bf1c3f58f2916 460 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 457 2.3E-217 T 17-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 BJD13_23725 abe6d9a081b57524d68bf1c3f58f2916 460 Pfam PF03315 Serine dehydratase beta chain 4 158 1.3E-58 T 17-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 BJD13_06990 6856c7ca0cd1a97123c944f264db584b 378 Pfam PF00072 Response regulator receiver domain 30 142 8.4E-26 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_06990 6856c7ca0cd1a97123c944f264db584b 378 SUPERFAMILY SSF52172 28 176 4.41E-36 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_06990 6856c7ca0cd1a97123c944f264db584b 378 Gene3D G3DSA:3.40.50.2300 18 163 1.6E-34 T 17-10-2018 BJD13_06990 6856c7ca0cd1a97123c944f264db584b 378 Gene3D G3DSA:1.10.3210.10 171 372 2.6E-71 T 17-10-2018 BJD13_06990 6856c7ca0cd1a97123c944f264db584b 378 Pfam PF01966 HD domain 202 319 5.7E-19 T 17-10-2018 IPR006674 HD domain BJD13_06990 6856c7ca0cd1a97123c944f264db584b 378 SMART SM00448 28 143 5.2E-30 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_06990 6856c7ca0cd1a97123c944f264db584b 378 SMART SM00471 192 329 2.4E-6 T 17-10-2018 IPR003607 HD/PDEase domain BJD13_06990 6856c7ca0cd1a97123c944f264db584b 378 SUPERFAMILY SSF109604 170 356 3.66E-41 T 17-10-2018 BJD13_12485 82b88f31a944ae3cd475f3992a04df3b 318 PRINTS PR00114 Serine/threonine phosphatase family signature 32 59 5.6E-5 T 17-10-2018 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BJD13_12485 82b88f31a944ae3cd475f3992a04df3b 318 PRINTS PR00114 Serine/threonine phosphatase family signature 2 29 5.6E-5 T 17-10-2018 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BJD13_12485 82b88f31a944ae3cd475f3992a04df3b 318 PRINTS PR00114 Serine/threonine phosphatase family signature 176 192 5.6E-5 T 17-10-2018 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BJD13_12485 82b88f31a944ae3cd475f3992a04df3b 318 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 260 1.4E-77 T 17-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 BJD13_12485 82b88f31a944ae3cd475f3992a04df3b 318 Gene3D G3DSA:3.60.21.10 1 272 7.2E-65 T 17-10-2018 IPR029052 Metallo-dependent phosphatase-like BJD13_12485 82b88f31a944ae3cd475f3992a04df3b 318 SUPERFAMILY SSF56300 1 269 5.7E-47 T 17-10-2018 BJD13_12485 82b88f31a944ae3cd475f3992a04df3b 318 PIRSF PIRSF000903 1 274 9.2E-119 T 17-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 BJD13_12485 82b88f31a944ae3cd475f3992a04df3b 318 Pfam PF00149 Calcineurin-like phosphoesterase 1 85 1.4E-12 T 17-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 BJD13_12485 82b88f31a944ae3cd475f3992a04df3b 318 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 271 44.891 T 17-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 BJD13_22815 ae76d197c1e66611ddba8a75277967fc 825 SMART SM00564 353 396 1.9 T 17-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BJD13_22815 ae76d197c1e66611ddba8a75277967fc 825 SMART SM00564 239 270 0.0076 T 17-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BJD13_22815 ae76d197c1e66611ddba8a75277967fc 825 SMART SM00564 739 772 5.0 T 17-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BJD13_22815 ae76d197c1e66611ddba8a75277967fc 825 SMART SM00564 424 474 2.2 T 17-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BJD13_22815 ae76d197c1e66611ddba8a75277967fc 825 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 17 816 0.0 T 17-10-2018 IPR017511 PQQ-dependent membrane bound dehydrogenase GO:0016021|GO:0016614|GO:0048038|GO:0055114 BJD13_22815 ae76d197c1e66611ddba8a75277967fc 825 Pfam PF13360 PQQ-like domain 694 798 7.6E-6 T 17-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat BJD13_22815 ae76d197c1e66611ddba8a75277967fc 825 Pfam PF13360 PQQ-like domain 378 526 1.4E-6 T 17-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat BJD13_22815 ae76d197c1e66611ddba8a75277967fc 825 SUPERFAMILY SSF50998 180 817 7.72E-144 T 17-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily BJD13_22815 ae76d197c1e66611ddba8a75277967fc 825 Gene3D G3DSA:2.140.10.10 577 817 1.3E-36 T 17-10-2018 BJD13_22815 ae76d197c1e66611ddba8a75277967fc 825 Gene3D G3DSA:2.140.10.10 177 566 1.9E-113 T 17-10-2018 BJD13_22815 ae76d197c1e66611ddba8a75277967fc 825 Pfam PF01011 PQQ enzyme repeat 245 279 3.0E-5 T 17-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat BJD13_13210 ca25efe012bedaa05795c0049adf9bcf 400 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 160 188 - T 17-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 BJD13_13210 ca25efe012bedaa05795c0049adf9bcf 400 Gene3D G3DSA:1.20.81.30 251 362 2.1E-26 T 17-10-2018 BJD13_13210 ca25efe012bedaa05795c0049adf9bcf 400 Gene3D G3DSA:1.20.81.30 54 167 1.1E-25 T 17-10-2018 BJD13_13210 ca25efe012bedaa05795c0049adf9bcf 400 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 397 4.1E-136 T 17-10-2018 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 BJD13_13210 ca25efe012bedaa05795c0049adf9bcf 400 Pfam PF00482 Type II secretion system (T2SS), protein F 66 188 2.5E-25 T 17-10-2018 IPR018076 Type II secretion system F domain BJD13_13210 ca25efe012bedaa05795c0049adf9bcf 400 Pfam PF00482 Type II secretion system (T2SS), protein F 269 390 5.6E-27 T 17-10-2018 IPR018076 Type II secretion system F domain BJD13_13210 ca25efe012bedaa05795c0049adf9bcf 400 PRINTS PR00812 Bacterial general secretion pathway protein F signature 379 398 9.4E-30 T 17-10-2018 IPR003004 GspF/PilC family BJD13_13210 ca25efe012bedaa05795c0049adf9bcf 400 PRINTS PR00812 Bacterial general secretion pathway protein F signature 62 74 9.4E-30 T 17-10-2018 IPR003004 GspF/PilC family BJD13_13210 ca25efe012bedaa05795c0049adf9bcf 400 PRINTS PR00812 Bacterial general secretion pathway protein F signature 363 377 9.4E-30 T 17-10-2018 IPR003004 GspF/PilC family BJD13_13210 ca25efe012bedaa05795c0049adf9bcf 400 PRINTS PR00812 Bacterial general secretion pathway protein F signature 160 188 9.4E-30 T 17-10-2018 IPR003004 GspF/PilC family BJD13_17745 8621d1398c87739500411b420faaa32b 379 SUPERFAMILY SSF103473 6 367 1.7E-25 T 17-10-2018 IPR036259 MFS transporter superfamily BJD13_17745 8621d1398c87739500411b420faaa32b 379 Gene3D G3DSA:1.20.1250.20 3 170 3.1E-5 T 17-10-2018 BJD13_17745 8621d1398c87739500411b420faaa32b 379 Gene3D G3DSA:1.20.1250.20 186 368 1.3E-10 T 17-10-2018 BJD13_05620 8245de8a2a68dca14ee3cc0bd0fbe7cc 454 Pfam PF13618 Gluconate 2-dehydrogenase subunit 3 294 412 8.0E-6 T 17-10-2018 IPR027056 Gluconate 2-dehydrogenase subunit 3 KEGG: 00030+1.1.99.3|MetaCyc: PWY-7165 BJD13_05620 8245de8a2a68dca14ee3cc0bd0fbe7cc 454 Gene3D G3DSA:3.40.50.1820 2 248 2.4E-39 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_05620 8245de8a2a68dca14ee3cc0bd0fbe7cc 454 SUPERFAMILY SSF53474 3 249 2.43E-37 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_05620 8245de8a2a68dca14ee3cc0bd0fbe7cc 454 Pfam PF12697 Alpha/beta hydrolase family 6 241 1.5E-17 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD13_10850 e5cdce68499afa3345c1f7d9863086b7 209 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 67 1.1E-9 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD13_10850 e5cdce68499afa3345c1f7d9863086b7 209 SUPERFAMILY SSF46689 9 81 1.03E-11 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_10850 e5cdce68499afa3345c1f7d9863086b7 209 Gene3D G3DSA:1.10.357.10 6 204 5.1E-19 T 17-10-2018 BJD13_21875 83133cd1577750b40d224526d751227e 520 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 9 513 40.237 T 17-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 BJD13_21875 83133cd1577750b40d224526d751227e 520 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 206 219 - T 17-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 BJD13_21875 83133cd1577750b40d224526d751227e 520 Gene3D G3DSA:1.10.238.260 287 399 8.4E-37 T 17-10-2018 BJD13_21875 83133cd1577750b40d224526d751227e 520 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 11 501 2.7E-195 T 17-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 BJD13_21875 83133cd1577750b40d224526d751227e 520 Gene3D G3DSA:3.20.20.70 8 283 1.1E-106 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD13_21875 83133cd1577750b40d224526d751227e 520 Pfam PF00682 HMGL-like 11 279 4.2E-91 T 17-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 BJD13_21875 83133cd1577750b40d224526d751227e 520 Pfam PF08502 LeuA allosteric (dimerisation) domain 377 504 4.0E-30 T 17-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 BJD13_21875 83133cd1577750b40d224526d751227e 520 SUPERFAMILY SSF51569 8 298 2.05E-95 T 17-10-2018 BJD13_21875 83133cd1577750b40d224526d751227e 520 SUPERFAMILY SSF110921 417 503 4.32E-21 T 17-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 BJD13_21875 83133cd1577750b40d224526d751227e 520 SMART SM00917 376 504 3.0E-29 T 17-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 BJD13_21875 83133cd1577750b40d224526d751227e 520 Gene3D G3DSA:3.30.160.270 400 505 4.8E-10 T 17-10-2018 BJD13_21875 83133cd1577750b40d224526d751227e 520 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 19 35 - T 17-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 BJD13_00775 584e063945b1d74104d64608b2611273 331 Gene3D G3DSA:3.40.1750.20 186 252 7.4E-50 T 17-10-2018 BJD13_00775 584e063945b1d74104d64608b2611273 331 Gene3D G3DSA:3.90.226.10 86 287 7.4E-50 T 17-10-2018 BJD13_00775 584e063945b1d74104d64608b2611273 331 Pfam PF01343 Peptidase family S49 146 288 1.6E-24 T 17-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 BJD13_00775 584e063945b1d74104d64608b2611273 331 SUPERFAMILY SSF52096 81 282 1.4E-33 T 17-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BJD13_06900 bf2e2804a458f0d9a181b20c3fb8c1a9 261 SUPERFAMILY SSF141371 127 237 3.73E-5 T 17-10-2018 BJD13_06900 bf2e2804a458f0d9a181b20c3fb8c1a9 261 Pfam PF07317 Flagellar regulator YcgR 23 129 2.0E-27 T 17-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal BJD13_06900 bf2e2804a458f0d9a181b20c3fb8c1a9 261 Gene3D G3DSA:2.30.110.10 21 131 1.5E-12 T 17-10-2018 IPR012349 FMN-binding split barrel GO:0048037 BJD13_06900 bf2e2804a458f0d9a181b20c3fb8c1a9 261 Hamap MF_01457 Flagellar brake protein YcgR [ycgR]. 18 257 30.125 T 17-10-2018 IPR023787 Type III secretion system flagellar brake protein YcgR GO:0035438|GO:0071945 BJD13_06900 bf2e2804a458f0d9a181b20c3fb8c1a9 261 Pfam PF07238 PilZ domain 131 248 2.7E-12 T 17-10-2018 IPR009875 PilZ domain GO:0035438 BJD13_06900 bf2e2804a458f0d9a181b20c3fb8c1a9 261 Gene3D G3DSA:2.40.10.220 132 252 3.0E-22 T 17-10-2018 BJD13_19980 364e154e5aa0fc9414050b2a19581fbe 173 Gene3D G3DSA:3.40.630.30 1 173 4.6E-54 T 17-10-2018 BJD13_19980 364e154e5aa0fc9414050b2a19581fbe 173 SUPERFAMILY SSF55729 10 165 3.49E-32 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD13_19980 364e154e5aa0fc9414050b2a19581fbe 173 Pfam PF13420 Acetyltransferase (GNAT) domain 52 156 8.7E-18 T 17-10-2018 BJD13_16850 3452c1c739f31eb4a824bf0b1eff55ba 147 Pfam PF13670 Peptidase propeptide and YPEB domain 88 144 1.8E-9 T 17-10-2018 IPR025711 PepSY domain BJD13_16850 3452c1c739f31eb4a824bf0b1eff55ba 147 Pfam PF13670 Peptidase propeptide and YPEB domain 8 84 2.5E-13 T 17-10-2018 IPR025711 PepSY domain BJD13_06880 e06873f4cfe7a602abd7d1a16505f881 753 SUPERFAMILY SSF58104 234 394 9.68E-6 T 17-10-2018 BJD13_06880 e06873f4cfe7a602abd7d1a16505f881 753 Pfam PF12729 Four helix bundle sensory module for signal transduction 9 182 1.5E-17 T 17-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain BJD13_06880 e06873f4cfe7a602abd7d1a16505f881 753 Pfam PF00672 HAMP domain 214 262 2.3E-9 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_06880 e06873f4cfe7a602abd7d1a16505f881 753 SMART SM00283 448 695 3.5E-86 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD13_06880 e06873f4cfe7a602abd7d1a16505f881 753 SMART SM00304 395 447 22.0 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_06880 e06873f4cfe7a602abd7d1a16505f881 753 SMART SM00304 214 266 6.9E-11 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_06880 e06873f4cfe7a602abd7d1a16505f881 753 Gene3D G3DSA:1.20.120.1530 207 352 1.5E-42 T 17-10-2018 BJD13_06880 e06873f4cfe7a602abd7d1a16505f881 753 SUPERFAMILY SSF158472 214 265 1.7E-10 T 17-10-2018 BJD13_06880 e06873f4cfe7a602abd7d1a16505f881 753 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 509 662 4.0E-52 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD13_06880 e06873f4cfe7a602abd7d1a16505f881 753 Gene3D G3DSA:1.10.287.950 397 697 3.6E-84 T 17-10-2018 BJD13_06880 e06873f4cfe7a602abd7d1a16505f881 753 SUPERFAMILY SSF58104 415 697 2.62E-71 T 17-10-2018 BJD13_03735 c9363d1faeba127db05740200770f513 425 Pfam PF01266 FAD dependent oxidoreductase 60 400 4.4E-58 T 17-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 BJD13_03735 c9363d1faeba127db05740200770f513 425 SUPERFAMILY SSF54373 261 361 2.49E-14 T 17-10-2018 BJD13_03735 c9363d1faeba127db05740200770f513 425 Gene3D G3DSA:3.50.50.60 60 400 1.6E-70 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_03735 c9363d1faeba127db05740200770f513 425 SUPERFAMILY SSF51905 59 419 8.8E-48 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_03735 c9363d1faeba127db05740200770f513 425 Gene3D G3DSA:3.30.9.10 137 361 1.6E-70 T 17-10-2018 BJD13_07000 24e5cf1653202f8834e89d7dba5d68ff 351 SMART SM00937 62 172 1.1E-55 T 17-10-2018 IPR005139 Peptide chain release factor GO:0006415 BJD13_07000 24e5cf1653202f8834e89d7dba5d68ff 351 Gene3D G3DSA:3.30.160.20 203 298 4.8E-98 T 17-10-2018 BJD13_07000 24e5cf1653202f8834e89d7dba5d68ff 351 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 1 340 5.7E-153 T 17-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 BJD13_07000 24e5cf1653202f8834e89d7dba5d68ff 351 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 222 238 - T 17-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 BJD13_07000 24e5cf1653202f8834e89d7dba5d68ff 351 Pfam PF03462 PCRF domain 8 197 2.7E-56 T 17-10-2018 IPR005139 Peptide chain release factor GO:0006415 BJD13_07000 24e5cf1653202f8834e89d7dba5d68ff 351 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 1 342 37.027 T 17-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 BJD13_07000 24e5cf1653202f8834e89d7dba5d68ff 351 Pfam PF00472 RF-1 domain 205 314 6.9E-41 T 17-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 BJD13_07000 24e5cf1653202f8834e89d7dba5d68ff 351 Gene3D G3DSA:1.20.58.410 1 93 2.9E-25 T 17-10-2018 BJD13_07000 24e5cf1653202f8834e89d7dba5d68ff 351 Gene3D G3DSA:3.30.70.1660 107 335 4.8E-98 T 17-10-2018 BJD13_07000 24e5cf1653202f8834e89d7dba5d68ff 351 SUPERFAMILY SSF75620 9 340 3.01E-129 T 17-10-2018 BJD13_10020 81b1fe429df126bb91aa8f083ab93bc1 693 SUPERFAMILY SSF52096 10 304 2.81E-67 T 17-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BJD13_10020 81b1fe429df126bb91aa8f083ab93bc1 693 SUPERFAMILY SSF51735 316 495 2.39E-44 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_10020 81b1fe429df126bb91aa8f083ab93bc1 693 Gene3D G3DSA:3.40.50.720 308 498 4.2E-53 T 17-10-2018 BJD13_10020 81b1fe429df126bb91aa8f083ab93bc1 693 SUPERFAMILY SSF48179 603 681 4.0E-17 T 17-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BJD13_10020 81b1fe429df126bb91aa8f083ab93bc1 693 Pfam PF00378 Enoyl-CoA hydratase/isomerase 19 207 8.1E-39 T 17-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 BJD13_10020 81b1fe429df126bb91aa8f083ab93bc1 693 Gene3D G3DSA:3.90.226.10 9 307 2.7E-87 T 17-10-2018 BJD13_10020 81b1fe429df126bb91aa8f083ab93bc1 693 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 319 491 1.5E-46 T 17-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 BJD13_10020 81b1fe429df126bb91aa8f083ab93bc1 693 Gene3D G3DSA:1.10.1040.50 499 685 2.4E-51 T 17-10-2018 BJD13_10020 81b1fe429df126bb91aa8f083ab93bc1 693 SUPERFAMILY SSF48179 495 595 2.98E-22 T 17-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BJD13_10020 81b1fe429df126bb91aa8f083ab93bc1 693 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 496 586 3.5E-16 T 17-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 BJD13_21600 a8eeb0bc045634832b34b48893b264c7 314 Pfam PF02645 Uncharacterised protein, DegV family COG1307 2 307 5.5E-78 T 17-10-2018 IPR003797 DegV BJD13_21600 a8eeb0bc045634832b34b48893b264c7 314 SUPERFAMILY SSF82549 1 306 3.14E-57 T 17-10-2018 BJD13_21600 a8eeb0bc045634832b34b48893b264c7 314 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 3 305 1.3E-36 T 17-10-2018 IPR003797 DegV BJD13_21600 a8eeb0bc045634832b34b48893b264c7 314 Gene3D G3DSA:3.30.1180.10 170 308 1.3E-7 T 17-10-2018 BJD13_21600 a8eeb0bc045634832b34b48893b264c7 314 Gene3D G3DSA:3.40.50.10170 1 167 6.4E-26 T 17-10-2018 BJD13_02915 19205c439dfd58ab504023b86639841d 1019 Pfam PF13620 Carboxypeptidase regulatory-like domain 45 108 3.7E-7 T 17-10-2018 BJD13_02915 19205c439dfd58ab504023b86639841d 1019 Pfam PF07715 TonB-dependent Receptor Plug Domain 139 243 8.9E-10 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_02915 19205c439dfd58ab504023b86639841d 1019 SUPERFAMILY SSF56935 118 1019 1.4E-76 T 17-10-2018 BJD13_02915 19205c439dfd58ab504023b86639841d 1019 SUPERFAMILY SSF49452 29 108 4.12E-6 T 17-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 BJD13_02915 19205c439dfd58ab504023b86639841d 1019 Gene3D G3DSA:2.170.130.10 125 246 2.2E-9 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_02915 19205c439dfd58ab504023b86639841d 1019 Pfam PF00593 TonB dependent receptor 366 1017 1.7E-14 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_04290 d86f6f25b9d4b99263b5ae131daed670 206 Gene3D G3DSA:3.10.300.10 2 195 1.3E-66 T 17-10-2018 IPR036995 Methylpurine-DNA glycosylase superfamily GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 BJD13_04290 d86f6f25b9d4b99263b5ae131daed670 206 Pfam PF02245 Methylpurine-DNA glycosylase (MPG) 10 186 9.5E-61 T 17-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 BJD13_04290 d86f6f25b9d4b99263b5ae131daed670 206 Hamap MF_00527 Putative 3-methyladenine DNA glycosylase. 8 190 30.979 T 17-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 BJD13_04290 d86f6f25b9d4b99263b5ae131daed670 206 TIGRFAM TIGR00567 3mg: DNA-3-methyladenine glycosylase 6 190 1.6E-52 T 17-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 BJD13_04290 d86f6f25b9d4b99263b5ae131daed670 206 SUPERFAMILY SSF50486 4 195 3.37E-62 T 17-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 BJD13_09135 992b72aa588a0d6de68182daa158d2ef 257 Gene3D G3DSA:3.40.50.720 9 235 2.7E-23 T 17-10-2018 BJD13_09135 992b72aa588a0d6de68182daa158d2ef 257 SUPERFAMILY SSF51735 11 220 2.46E-23 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_09135 992b72aa588a0d6de68182daa158d2ef 257 Pfam PF00106 short chain dehydrogenase 10 184 2.0E-9 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_05825 b132ddbff13c50e1d25ac9340d93a4bf 235 SUPERFAMILY SSF52172 1 119 1.71E-33 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_05825 b132ddbff13c50e1d25ac9340d93a4bf 235 SMART SM00862 151 227 9.9E-21 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD13_05825 b132ddbff13c50e1d25ac9340d93a4bf 235 SUPERFAMILY SSF46894 128 228 8.22E-22 T 17-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BJD13_05825 b132ddbff13c50e1d25ac9340d93a4bf 235 Pfam PF00072 Response regulator receiver domain 1 111 1.4E-24 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_05825 b132ddbff13c50e1d25ac9340d93a4bf 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 227 4.2E-20 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD13_05825 b132ddbff13c50e1d25ac9340d93a4bf 235 Gene3D G3DSA:1.10.10.10 129 233 2.5E-29 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_05825 b132ddbff13c50e1d25ac9340d93a4bf 235 SMART SM00448 1 110 1.4E-27 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_05825 b132ddbff13c50e1d25ac9340d93a4bf 235 Gene3D G3DSA:3.40.50.2300 1 128 2.5E-31 T 17-10-2018 BJD13_06920 ee97c65a709e070d1c5e4377728da23b 286 SMART SM00138 19 281 4.2E-86 T 17-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BJD13_06920 ee97c65a709e070d1c5e4377728da23b 286 Gene3D G3DSA:1.10.155.10 7 85 1.1E-27 T 17-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily BJD13_06920 ee97c65a709e070d1c5e4377728da23b 286 Pfam PF03705 CheR methyltransferase, all-alpha domain 21 70 4.6E-18 T 17-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal BJD13_06920 ee97c65a709e070d1c5e4377728da23b 286 SUPERFAMILY SSF47757 11 86 1.44E-23 T 17-10-2018 BJD13_06920 ee97c65a709e070d1c5e4377728da23b 286 PIRSF PIRSF000410 1 282 5.3E-89 T 17-10-2018 IPR026024 Chemotaxis protein methyltransferase CheR BJD13_06920 ee97c65a709e070d1c5e4377728da23b 286 Pfam PF01739 CheR methyltransferase, SAM binding domain 87 271 1.4E-48 T 17-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal BJD13_06920 ee97c65a709e070d1c5e4377728da23b 286 Gene3D G3DSA:3.40.50.150 86 281 8.2E-58 T 17-10-2018 BJD13_06920 ee97c65a709e070d1c5e4377728da23b 286 SUPERFAMILY SSF53335 87 278 2.98E-48 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_06920 ee97c65a709e070d1c5e4377728da23b 286 PRINTS PR00996 Glutamate methyltransferase family signature 240 263 1.3E-38 T 17-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BJD13_06920 ee97c65a709e070d1c5e4377728da23b 286 PRINTS PR00996 Glutamate methyltransferase family signature 80 92 1.3E-38 T 17-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BJD13_06920 ee97c65a709e070d1c5e4377728da23b 286 PRINTS PR00996 Glutamate methyltransferase family signature 115 135 1.3E-38 T 17-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BJD13_06920 ee97c65a709e070d1c5e4377728da23b 286 PRINTS PR00996 Glutamate methyltransferase family signature 221 235 1.3E-38 T 17-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BJD13_06920 ee97c65a709e070d1c5e4377728da23b 286 PRINTS PR00996 Glutamate methyltransferase family signature 41 54 1.3E-38 T 17-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BJD13_06920 ee97c65a709e070d1c5e4377728da23b 286 PRINTS PR00996 Glutamate methyltransferase family signature 149 165 1.3E-38 T 17-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BJD13_06585 674f73a61bf4462c75c81cde8726ec97 458 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 163 374 7.4E-72 T 17-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BJD13_06585 674f73a61bf4462c75c81cde8726ec97 458 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 36 454 5.8E-167 T 17-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BJD13_06585 674f73a61bf4462c75c81cde8726ec97 458 SMART SM00382 175 359 1.2E-7 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_06585 674f73a61bf4462c75c81cde8726ec97 458 SUPERFAMILY SSF52540 111 379 2.42E-92 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_06585 674f73a61bf4462c75c81cde8726ec97 458 Gene3D G3DSA:3.40.50.12240 35 456 5.3E-146 T 17-10-2018 BJD13_03815 75f49d2a55fc16396f72e91ad8c28462 1452 Gene3D G3DSA:2.60.40.10 1047 1134 2.0E-6 T 17-10-2018 IPR013783 Immunoglobulin-like fold BJD13_03815 75f49d2a55fc16396f72e91ad8c28462 1452 SUPERFAMILY SSF48208 304 786 2.93E-17 T 17-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 BJD13_03815 75f49d2a55fc16396f72e91ad8c28462 1452 Pfam PF07532 Bacterial Ig-like domain (group 4) 1302 1353 2.4E-8 T 17-10-2018 IPR011081 Bacterial Ig-related BJD13_03815 75f49d2a55fc16396f72e91ad8c28462 1452 Pfam PF07532 Bacterial Ig-like domain (group 4) 1379 1432 1.0E-10 T 17-10-2018 IPR011081 Bacterial Ig-related BJD13_03815 75f49d2a55fc16396f72e91ad8c28462 1452 SUPERFAMILY SSF49785 876 1026 3.83E-10 T 17-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD13_03815 75f49d2a55fc16396f72e91ad8c28462 1452 Gene3D G3DSA:2.60.120.260 872 1028 2.0E-27 T 17-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD13_03815 75f49d2a55fc16396f72e91ad8c28462 1452 Gene3D G3DSA:2.60.120.260 1137 1291 1.5E-27 T 17-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD13_03815 75f49d2a55fc16396f72e91ad8c28462 1452 Pfam PF00754 F5/8 type C domain 889 1015 2.3E-7 T 17-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain BJD13_03815 75f49d2a55fc16396f72e91ad8c28462 1452 Gene3D G3DSA:1.50.10.10 379 624 2.3E-8 T 17-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 BJD13_00495 f6c1bb4ad4217399c4910bab82997a72 365 Pfam PF13245 AAA domain 5 188 1.5E-10 T 17-10-2018 BJD13_00495 f6c1bb4ad4217399c4910bab82997a72 365 SUPERFAMILY SSF52540 6 357 1.2E-19 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_16855 b1490ebc1a44c3839a690d84068b99f3 598 Pfam PF02225 PA domain 154 245 4.2E-6 T 17-10-2018 IPR003137 PA domain BJD13_16855 b1490ebc1a44c3839a690d84068b99f3 598 SUPERFAMILY SSF53187 50 545 3.74E-63 T 17-10-2018 BJD13_16855 b1490ebc1a44c3839a690d84068b99f3 598 Gene3D G3DSA:3.40.630.10 269 547 6.7E-52 T 17-10-2018 BJD13_16855 b1490ebc1a44c3839a690d84068b99f3 598 Pfam PF04389 Peptidase family M28 320 535 3.9E-50 T 17-10-2018 IPR007484 Peptidase M28 BJD13_16855 b1490ebc1a44c3839a690d84068b99f3 598 Gene3D G3DSA:3.40.630.10 44 120 1.4E-5 T 17-10-2018 BJD13_16855 b1490ebc1a44c3839a690d84068b99f3 598 SUPERFAMILY SSF52025 153 281 5.36E-5 T 17-10-2018 BJD13_09650 c8871c71785e52996163bbf7368831d2 196 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 182 1.6E-27 T 17-10-2018 BJD13_09650 c8871c71785e52996163bbf7368831d2 196 Gene3D G3DSA:3.40.50.1000 3 187 1.8E-31 T 17-10-2018 IPR023214 HAD superfamily BJD13_09650 c8871c71785e52996163bbf7368831d2 196 Gene3D G3DSA:1.20.1440.100 15 87 1.8E-31 T 17-10-2018 BJD13_09650 c8871c71785e52996163bbf7368831d2 196 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 185 2.7E-21 T 17-10-2018 BJD13_09650 c8871c71785e52996163bbf7368831d2 196 SUPERFAMILY SSF56784 2 186 7.74E-23 T 17-10-2018 IPR036412 HAD-like superfamily BJD13_02830 1d1c44beafc8d9c87effaa23f96fe379 568 Gene3D G3DSA:3.40.720.10 44 549 7.5E-173 T 17-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 BJD13_02830 1d1c44beafc8d9c87effaa23f96fe379 568 SMART SM00098 72 538 3.1E-156 T 17-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 BJD13_02830 1d1c44beafc8d9c87effaa23f96fe379 568 SUPERFAMILY SSF53649 66 534 5.82E-144 T 17-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 BJD13_02830 1d1c44beafc8d9c87effaa23f96fe379 568 Pfam PF00245 Alkaline phosphatase 71 533 3.5E-124 T 17-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 BJD13_02830 1d1c44beafc8d9c87effaa23f96fe379 568 PRINTS PR00113 Alkaline phosphatase signature 173 193 2.0E-44 T 17-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 BJD13_02830 1d1c44beafc8d9c87effaa23f96fe379 568 PRINTS PR00113 Alkaline phosphatase signature 324 353 2.0E-44 T 17-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 BJD13_02830 1d1c44beafc8d9c87effaa23f96fe379 568 PRINTS PR00113 Alkaline phosphatase signature 71 91 2.0E-44 T 17-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 BJD13_02830 1d1c44beafc8d9c87effaa23f96fe379 568 PRINTS PR00113 Alkaline phosphatase signature 127 142 2.0E-44 T 17-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 BJD13_02830 1d1c44beafc8d9c87effaa23f96fe379 568 PRINTS PR00113 Alkaline phosphatase signature 236 246 2.0E-44 T 17-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 BJD13_18205 ab29c79914232a84d1044c9a53e97f4e 423 Gene3D G3DSA:1.20.1600.10 23 416 8.8E-44 T 17-10-2018 BJD13_18205 ab29c79914232a84d1044c9a53e97f4e 423 SUPERFAMILY SSF56954 2 413 2.88E-54 T 17-10-2018 BJD13_18205 ab29c79914232a84d1044c9a53e97f4e 423 Pfam PF02321 Outer membrane efflux protein 30 211 1.7E-14 T 17-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 BJD13_18205 ab29c79914232a84d1044c9a53e97f4e 423 Pfam PF02321 Outer membrane efflux protein 234 410 7.4E-8 T 17-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 BJD13_06610 471e11761e367fd5b69c947521344ed6 112 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 29 104 2.4E-34 T 17-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 BJD13_06610 471e11761e367fd5b69c947521344ed6 112 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 33 102 1.2E-25 T 17-10-2018 IPR001543 Surface presentation of antigen (SpoA) BJD13_06610 471e11761e367fd5b69c947521344ed6 112 Gene3D G3DSA:2.30.330.10 18 112 8.7E-35 T 17-10-2018 IPR036429 SpoA-like superfamily BJD13_06610 471e11761e367fd5b69c947521344ed6 112 SUPERFAMILY SSF101801 29 110 1.96E-25 T 17-10-2018 IPR036429 SpoA-like superfamily BJD13_06610 471e11761e367fd5b69c947521344ed6 112 PRINTS PR00956 Flagellar motor switch protein FliN signature 65 78 2.9E-26 T 17-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 BJD13_06610 471e11761e367fd5b69c947521344ed6 112 PRINTS PR00956 Flagellar motor switch protein FliN signature 32 48 2.9E-26 T 17-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 BJD13_06610 471e11761e367fd5b69c947521344ed6 112 PRINTS PR00956 Flagellar motor switch protein FliN signature 49 65 2.9E-26 T 17-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 BJD13_06610 471e11761e367fd5b69c947521344ed6 112 PRINTS PR00956 Flagellar motor switch protein FliN signature 78 93 2.9E-26 T 17-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 BJD13_10370 2d1b41a64e62f35a1c256215ef8fa17d 943 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 59 70 - T 17-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD13_10370 2d1b41a64e62f35a1c256215ef8fa17d 943 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 29 657 1.6E-194 T 17-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD13_10370 2d1b41a64e62f35a1c256215ef8fa17d 943 Pfam PF08264 Anticodon-binding domain of tRNA 701 855 9.0E-27 T 17-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 BJD13_10370 2d1b41a64e62f35a1c256215ef8fa17d 943 SUPERFAMILY SSF50677 205 421 2.62E-41 T 17-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 BJD13_10370 2d1b41a64e62f35a1c256215ef8fa17d 943 Gene3D G3DSA:3.90.740.10 196 426 2.9E-218 T 17-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 BJD13_10370 2d1b41a64e62f35a1c256215ef8fa17d 943 Pfam PF06827 Zinc finger found in FPG and IleRS 905 931 3.4E-7 T 17-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 BJD13_10370 2d1b41a64e62f35a1c256215ef8fa17d 943 SUPERFAMILY SSF47323 668 934 5.98E-68 T 17-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD13_10370 2d1b41a64e62f35a1c256215ef8fa17d 943 SUPERFAMILY SSF52374 5 662 3.75E-132 T 17-10-2018 BJD13_10370 2d1b41a64e62f35a1c256215ef8fa17d 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 577 586 1.9E-30 T 17-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 BJD13_10370 2d1b41a64e62f35a1c256215ef8fa17d 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 240 263 1.9E-30 T 17-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 BJD13_10370 2d1b41a64e62f35a1c256215ef8fa17d 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 52 63 1.9E-30 T 17-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 BJD13_10370 2d1b41a64e62f35a1c256215ef8fa17d 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 419 434 1.9E-30 T 17-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 BJD13_10370 2d1b41a64e62f35a1c256215ef8fa17d 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 544 557 1.9E-30 T 17-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 BJD13_10370 2d1b41a64e62f35a1c256215ef8fa17d 943 Gene3D G3DSA:1.10.730.20 656 935 4.7E-83 T 17-10-2018 BJD13_10370 2d1b41a64e62f35a1c256215ef8fa17d 943 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 858 7.3E-265 T 17-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 BJD13_10370 2d1b41a64e62f35a1c256215ef8fa17d 943 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 3 934 20.97 T 17-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 BJD13_10370 2d1b41a64e62f35a1c256215ef8fa17d 943 Gene3D G3DSA:3.40.50.620 26 645 2.9E-218 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD13_16065 f9918ca2c44d40a3228bc7d8691aa2b0 690 SMART SM00028 237 270 39.0 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD13_16065 f9918ca2c44d40a3228bc7d8691aa2b0 690 SMART SM00028 168 201 0.065 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD13_16065 f9918ca2c44d40a3228bc7d8691aa2b0 690 SMART SM00028 100 133 27.0 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD13_16065 f9918ca2c44d40a3228bc7d8691aa2b0 690 SMART SM00028 134 167 77.0 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD13_16065 f9918ca2c44d40a3228bc7d8691aa2b0 690 SMART SM00028 32 65 11.0 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD13_16065 f9918ca2c44d40a3228bc7d8691aa2b0 690 SMART SM00028 66 99 47.0 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD13_16065 f9918ca2c44d40a3228bc7d8691aa2b0 690 SUPERFAMILY SSF48452 11 303 1.48E-29 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_16065 f9918ca2c44d40a3228bc7d8691aa2b0 690 Gene3D G3DSA:1.25.40.10 4 139 2.6E-19 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_16065 f9918ca2c44d40a3228bc7d8691aa2b0 690 Gene3D G3DSA:1.25.40.10 320 450 6.8E-6 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_16065 f9918ca2c44d40a3228bc7d8691aa2b0 690 Gene3D G3DSA:1.25.40.10 140 315 6.0E-23 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_16065 f9918ca2c44d40a3228bc7d8691aa2b0 690 Pfam PF13432 Tetratricopeptide repeat 145 200 2.0E-5 T 17-10-2018 BJD13_16065 f9918ca2c44d40a3228bc7d8691aa2b0 690 Pfam PF13432 Tetratricopeptide repeat 38 98 2.1E-4 T 17-10-2018 BJD13_16065 f9918ca2c44d40a3228bc7d8691aa2b0 690 Pfam PF13432 Tetratricopeptide repeat 209 270 3.2E-7 T 17-10-2018 BJD13_06150 3c00e1f391d814367285fcf6c0f4119e 417 Gene3D G3DSA:3.90.105.10 20 175 1.1E-106 T 17-10-2018 BJD13_06150 3c00e1f391d814367285fcf6c0f4119e 417 Gene3D G3DSA:2.40.340.10 330 395 1.1E-106 T 17-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BJD13_06150 3c00e1f391d814367285fcf6c0f4119e 417 SUPERFAMILY SSF63882 1 177 1.57E-45 T 17-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BJD13_06150 3c00e1f391d814367285fcf6c0f4119e 417 Gene3D G3DSA:2.170.190.11 44 142 1.1E-106 T 17-10-2018 BJD13_06150 3c00e1f391d814367285fcf6c0f4119e 417 Pfam PF03453 MoeA N-terminal region (domain I and II) 2 168 5.2E-40 T 17-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BJD13_06150 3c00e1f391d814367285fcf6c0f4119e 417 SUPERFAMILY SSF53218 178 326 7.85E-33 T 17-10-2018 IPR036425 MoaB/Mog-like domain superfamily BJD13_06150 3c00e1f391d814367285fcf6c0f4119e 417 SMART SM00852 181 322 6.9E-30 T 17-10-2018 IPR001453 MoaB/Mog domain BJD13_06150 3c00e1f391d814367285fcf6c0f4119e 417 Pfam PF03454 MoeA C-terminal region (domain IV) 334 399 6.0E-5 T 17-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BJD13_06150 3c00e1f391d814367285fcf6c0f4119e 417 Gene3D G3DSA:3.40.980.10 176 329 1.1E-106 T 17-10-2018 IPR036425 MoaB/Mog-like domain superfamily BJD13_06150 3c00e1f391d814367285fcf6c0f4119e 417 Pfam PF00994 Probable molybdopterin binding domain 182 321 1.8E-25 T 17-10-2018 IPR001453 MoaB/Mog domain BJD13_06150 3c00e1f391d814367285fcf6c0f4119e 417 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 256 290 - T 17-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 BJD13_06150 3c00e1f391d814367285fcf6c0f4119e 417 SUPERFAMILY SSF63867 332 406 1.83E-7 T 17-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BJD13_22980 93377b8d5b7edf241e9aea4f132e83a1 253 Gene3D G3DSA:3.20.20.60 1 244 6.4E-67 T 17-10-2018 BJD13_22980 93377b8d5b7edf241e9aea4f132e83a1 253 SUPERFAMILY SSF51621 5 241 1.5E-60 T 17-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 BJD13_22980 93377b8d5b7edf241e9aea4f132e83a1 253 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 16 196 1.2E-26 T 17-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 BJD13_11705 a036baa60559369bed8031e7cbac4bfd 365 PRINTS PR01021 OMPA domain signature 301 317 4.8E-18 T 17-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BJD13_11705 a036baa60559369bed8031e7cbac4bfd 365 PRINTS PR01021 OMPA domain signature 286 301 4.8E-18 T 17-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BJD13_11705 a036baa60559369bed8031e7cbac4bfd 365 PRINTS PR01021 OMPA domain signature 256 278 4.8E-18 T 17-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BJD13_11705 a036baa60559369bed8031e7cbac4bfd 365 Pfam PF00691 OmpA family 255 346 7.1E-23 T 17-10-2018 IPR006665 OmpA-like domain BJD13_11705 a036baa60559369bed8031e7cbac4bfd 365 Pfam PF13505 Outer membrane protein beta-barrel domain 8 188 6.0E-20 T 17-10-2018 IPR027385 Outer membrane protein beta-barrel BJD13_11705 a036baa60559369bed8031e7cbac4bfd 365 SUPERFAMILY SSF103647 210 246 4.18E-5 T 17-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 BJD13_11705 a036baa60559369bed8031e7cbac4bfd 365 Gene3D G3DSA:2.40.160.20 18 191 1.6E-25 T 17-10-2018 BJD13_11705 a036baa60559369bed8031e7cbac4bfd 365 SUPERFAMILY SSF56925 27 187 2.41E-17 T 17-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel BJD13_11705 a036baa60559369bed8031e7cbac4bfd 365 Gene3D G3DSA:3.30.1330.60 245 365 2.8E-39 T 17-10-2018 IPR036737 OmpA-like domain superfamily BJD13_11705 a036baa60559369bed8031e7cbac4bfd 365 SUPERFAMILY SSF103088 253 363 1.18E-35 T 17-10-2018 IPR036737 OmpA-like domain superfamily BJD13_14135 8eff9a9097745121ce93340d3e2482ab 172 Gene3D G3DSA:2.60.120.10 46 157 2.3E-5 T 17-10-2018 IPR014710 RmlC-like jelly roll fold BJD13_14135 8eff9a9097745121ce93340d3e2482ab 172 SUPERFAMILY SSF51182 66 159 3.96E-8 T 17-10-2018 IPR011051 RmlC-like cupin domain superfamily BJD13_20200 7f0dd4a22de8822f5e801e2139d32baa 118 Pfam PF16931 Putative phage holin 1 114 4.5E-34 T 17-10-2018 IPR032637 Putative phage holin-like BJD13_18275 2c5644ea6d8c177b83a0a5c78951741f 728 Gene3D G3DSA:1.10.486.10 383 543 9.3E-124 T 17-10-2018 BJD13_18275 2c5644ea6d8c177b83a0a5c78951741f 728 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 272 5.8E-68 T 17-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 BJD13_18275 2c5644ea6d8c177b83a0a5c78951741f 728 Pfam PF13361 UvrD-like helicase C-terminal domain 278 621 1.0E-73 T 17-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 BJD13_18275 2c5644ea6d8c177b83a0a5c78951741f 728 Gene3D G3DSA:3.40.50.300 10 275 6.7E-95 T 17-10-2018 BJD13_18275 2c5644ea6d8c177b83a0a5c78951741f 728 TIGRFAM TIGR01075 uvrD: DNA helicase II 6 725 0.0 T 17-10-2018 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 BJD13_18275 2c5644ea6d8c177b83a0a5c78951741f 728 Gene3D G3DSA:3.40.50.300 282 641 9.3E-124 T 17-10-2018 BJD13_18275 2c5644ea6d8c177b83a0a5c78951741f 728 Gene3D G3DSA:1.10.10.160 114 188 6.7E-95 T 17-10-2018 IPR013986 DExx box DNA helicase domain superfamily BJD13_18275 2c5644ea6d8c177b83a0a5c78951741f 728 SUPERFAMILY SSF52540 6 647 1.5E-176 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_21560 e0b89c1f3df8a568e584239ad00c7398 393 Gene3D G3DSA:1.50.10.10 39 384 1.7E-123 T 17-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 BJD13_21560 e0b89c1f3df8a568e584239ad00c7398 393 PRINTS PR00735 Glycosyl hydrolase family 8 signature 131 149 7.3E-16 T 17-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 BJD13_21560 e0b89c1f3df8a568e584239ad00c7398 393 PRINTS PR00735 Glycosyl hydrolase family 8 signature 196 213 7.3E-16 T 17-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 BJD13_21560 e0b89c1f3df8a568e584239ad00c7398 393 PRINTS PR00735 Glycosyl hydrolase family 8 signature 234 245 7.3E-16 T 17-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 BJD13_21560 e0b89c1f3df8a568e584239ad00c7398 393 PRINTS PR00735 Glycosyl hydrolase family 8 signature 355 369 7.3E-16 T 17-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 BJD13_21560 e0b89c1f3df8a568e584239ad00c7398 393 PRINTS PR00735 Glycosyl hydrolase family 8 signature 69 82 7.3E-16 T 17-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 BJD13_21560 e0b89c1f3df8a568e584239ad00c7398 393 PRINTS PR00735 Glycosyl hydrolase family 8 signature 258 267 7.3E-16 T 17-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 BJD13_21560 e0b89c1f3df8a568e584239ad00c7398 393 SUPERFAMILY SSF48208 24 375 4.21E-92 T 17-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 BJD13_21560 e0b89c1f3df8a568e584239ad00c7398 393 Pfam PF01270 Glycosyl hydrolases family 8 25 367 8.7E-60 T 17-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 BJD13_15320 3f9d653f632e016012fc277cda122409 143 SUPERFAMILY SSF46785 18 128 1.75E-32 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_15320 3f9d653f632e016012fc277cda122409 143 Gene3D G3DSA:1.10.10.10 13 130 3.0E-40 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_15320 3f9d653f632e016012fc277cda122409 143 Pfam PF01638 HxlR-like helix-turn-helix 31 115 7.8E-27 T 17-10-2018 IPR002577 Helix-turn-helix, HxlR type BJD13_03170 b1b6f45e9d96ef73a1c6a09e8900a5f4 162 Pfam PF12838 4Fe-4S dicluster domain 62 115 5.7E-12 T 17-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BJD13_03170 b1b6f45e9d96ef73a1c6a09e8900a5f4 162 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 63 74 - T 17-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BJD13_03170 b1b6f45e9d96ef73a1c6a09e8900a5f4 162 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 102 113 - T 17-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BJD13_03170 b1b6f45e9d96ef73a1c6a09e8900a5f4 162 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 10 159 26.491 T 17-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_03170 b1b6f45e9d96ef73a1c6a09e8900a5f4 162 SUPERFAMILY SSF54862 36 145 6.28E-25 T 17-10-2018 BJD13_03170 b1b6f45e9d96ef73a1c6a09e8900a5f4 162 Gene3D G3DSA:3.30.70.3270 36 161 3.2E-35 T 17-10-2018 BJD13_03170 b1b6f45e9d96ef73a1c6a09e8900a5f4 162 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 19 139 4.1E-44 T 17-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_11865 b44602a7d47ea7543dfd730a003ec9e7 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 19.181 T 17-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_11865 b44602a7d47ea7543dfd730a003ec9e7 105 SMART SM00739 4 31 5.3E-5 T 17-10-2018 IPR005824 KOW BJD13_11865 b44602a7d47ea7543dfd730a003ec9e7 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 102 3.7E-23 T 17-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_11865 b44602a7d47ea7543dfd730a003ec9e7 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 102 2.9E-32 T 17-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_11865 b44602a7d47ea7543dfd730a003ec9e7 105 Gene3D G3DSA:2.30.30.30 2 104 8.2E-33 T 17-10-2018 IPR014722 Ribosomal protein L2, domain 2 BJD13_11865 b44602a7d47ea7543dfd730a003ec9e7 105 SUPERFAMILY SSF50104 3 99 4.33E-29 T 17-10-2018 IPR008991 Translation protein SH3-like domain superfamily BJD13_11865 b44602a7d47ea7543dfd730a003ec9e7 105 Pfam PF00467 KOW motif 7 35 1.5E-5 T 17-10-2018 IPR005824 KOW BJD13_09225 819d5692e49166aa7157d53e2dc251ac 159 Pfam PF05433 Glycine zipper 2TM domain 67 113 9.8E-10 T 17-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 BJD13_21210 81c7426cb0f38e7d28d3290e6ecb5832 299 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 4 294 8.2E-107 T 17-10-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 BJD13_21210 81c7426cb0f38e7d28d3290e6ecb5832 299 SUPERFAMILY SSF51735 3 296 4.69E-98 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_21210 81c7426cb0f38e7d28d3290e6ecb5832 299 Gene3D G3DSA:3.40.50.720 4 283 1.3E-108 T 17-10-2018 BJD13_21210 81c7426cb0f38e7d28d3290e6ecb5832 299 Pfam PF04321 RmlD substrate binding domain 3 296 1.4E-107 T 17-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 BJD13_21210 81c7426cb0f38e7d28d3290e6ecb5832 299 Gene3D G3DSA:3.90.25.10 168 290 1.3E-108 T 17-10-2018 BJD13_07790 d45ec9c2e54cf1e4b29ce73d3b4b9180 302 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 39 56 - T 17-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BJD13_07790 d45ec9c2e54cf1e4b29ce73d3b4b9180 302 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 2 287 55.369 T 17-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BJD13_07790 d45ec9c2e54cf1e4b29ce73d3b4b9180 302 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 134 164 - T 17-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 BJD13_07790 d45ec9c2e54cf1e4b29ce73d3b4b9180 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 129 146 2.0E-26 T 17-10-2018 IPR002220 DapA-like GO:0016829 BJD13_07790 d45ec9c2e54cf1e4b29ce73d3b4b9180 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 36 57 2.0E-26 T 17-10-2018 IPR002220 DapA-like GO:0016829 BJD13_07790 d45ec9c2e54cf1e4b29ce73d3b4b9180 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 72 90 2.0E-26 T 17-10-2018 IPR002220 DapA-like GO:0016829 BJD13_07790 d45ec9c2e54cf1e4b29ce73d3b4b9180 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 104 120 2.0E-26 T 17-10-2018 IPR002220 DapA-like GO:0016829 BJD13_07790 d45ec9c2e54cf1e4b29ce73d3b4b9180 302 Pfam PF00701 Dihydrodipicolinate synthetase family 3 284 4.3E-78 T 17-10-2018 IPR002220 DapA-like GO:0016829 BJD13_07790 d45ec9c2e54cf1e4b29ce73d3b4b9180 302 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 6 279 1.4E-81 T 17-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BJD13_07790 d45ec9c2e54cf1e4b29ce73d3b4b9180 302 PIRSF PIRSF001365 2 299 2.6E-83 T 17-10-2018 IPR002220 DapA-like GO:0016829 BJD13_07790 d45ec9c2e54cf1e4b29ce73d3b4b9180 302 SMART SM01130 2 289 1.4E-110 T 17-10-2018 IPR002220 DapA-like GO:0016829 BJD13_07790 d45ec9c2e54cf1e4b29ce73d3b4b9180 302 SUPERFAMILY SSF51569 3 286 1.15E-87 T 17-10-2018 BJD13_07790 d45ec9c2e54cf1e4b29ce73d3b4b9180 302 Gene3D G3DSA:3.20.20.70 2 288 1.9E-94 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD13_04130 f0f6e97242ab0b0591b0ead2470d9135 455 Gene3D G3DSA:3.40.640.10 67 342 2.6E-172 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD13_04130 f0f6e97242ab0b0591b0ead2470d9135 455 Gene3D G3DSA:3.90.1150.10 13 446 2.6E-172 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD13_04130 f0f6e97242ab0b0591b0ead2470d9135 455 Pfam PF00202 Aminotransferase class-III 33 442 3.2E-89 T 17-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BJD13_04130 f0f6e97242ab0b0591b0ead2470d9135 455 SUPERFAMILY SSF53383 13 447 4.5E-115 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD13_04130 f0f6e97242ab0b0591b0ead2470d9135 455 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 255 292 - T 17-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BJD13_01485 2177ed6b6c4fa27a924ceab337f0e420 85 SMART SM00530 27 82 2.6E-6 T 17-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BJD13_01485 2177ed6b6c4fa27a924ceab337f0e420 85 Pfam PF13560 Helix-turn-helix domain 24 78 3.1E-9 T 17-10-2018 BJD13_01485 2177ed6b6c4fa27a924ceab337f0e420 85 Gene3D G3DSA:1.10.260.40 11 85 1.1E-14 T 17-10-2018 BJD13_01485 2177ed6b6c4fa27a924ceab337f0e420 85 SUPERFAMILY SSF47413 22 83 2.03E-12 T 17-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BJD13_15750 42cb9672524318cafeee3d82caebad06 837 SUPERFAMILY SSF81901 418 606 1.96E-13 T 17-10-2018 BJD13_15750 42cb9672524318cafeee3d82caebad06 837 Pfam PF13181 Tetratricopeptide repeat 557 579 0.11 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD13_15750 42cb9672524318cafeee3d82caebad06 837 Gene3D G3DSA:3.30.70.1230 6 201 5.3E-32 T 17-10-2018 IPR029787 Nucleotide cyclase BJD13_15750 42cb9672524318cafeee3d82caebad06 837 Gene3D G3DSA:1.25.40.10 398 488 1.5E-8 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_15750 42cb9672524318cafeee3d82caebad06 837 Pfam PF14559 Tetratricopeptide repeat 426 474 2.0E-6 T 17-10-2018 BJD13_15750 42cb9672524318cafeee3d82caebad06 837 Gene3D G3DSA:1.25.40.10 495 785 1.8E-9 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_15750 42cb9672524318cafeee3d82caebad06 837 SUPERFAMILY SSF55073 19 207 7.53E-21 T 17-10-2018 IPR029787 Nucleotide cyclase BJD13_15750 42cb9672524318cafeee3d82caebad06 837 TIGRFAM TIGR04510 mod_pep_cyc: putative peptide modification system cyclase 17 827 0.0 T 17-10-2018 IPR030966 Putative peptide modification system cyclase BJD13_18410 49a326af6d779f2fbf543648cd09caca 81 Gene3D G3DSA:2.60.200.60 1 38 4.0E-7 T 17-10-2018 BJD13_18410 49a326af6d779f2fbf543648cd09caca 81 Pfam PF05488 PAAR motif 4 71 3.3E-25 T 17-10-2018 IPR008727 PAAR motif BJD13_18410 49a326af6d779f2fbf543648cd09caca 81 Gene3D G3DSA:2.60.200.60 39 81 9.3E-11 T 17-10-2018 BJD13_12410 9dcfb708b45beff080124552346e5efe 224 Gene3D G3DSA:1.10.10.10 6 71 1.3E-18 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_12410 9dcfb708b45beff080124552346e5efe 224 SUPERFAMILY SSF48008 77 219 3.4E-18 T 17-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal BJD13_12410 9dcfb708b45beff080124552346e5efe 224 Gene3D G3DSA:1.20.120.530 73 222 5.0E-23 T 17-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal BJD13_12410 9dcfb708b45beff080124552346e5efe 224 SMART SM00345 12 70 1.3E-11 T 17-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD13_12410 9dcfb708b45beff080124552346e5efe 224 Pfam PF07729 FCD domain 81 215 1.5E-17 T 17-10-2018 IPR011711 GntR, C-terminal BJD13_12410 9dcfb708b45beff080124552346e5efe 224 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 70 1.7E-14 T 17-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD13_12410 9dcfb708b45beff080124552346e5efe 224 SMART SM00895 80 217 4.5E-20 T 17-10-2018 IPR011711 GntR, C-terminal BJD13_12410 9dcfb708b45beff080124552346e5efe 224 SUPERFAMILY SSF46785 9 74 7.87E-18 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_12410 9dcfb708b45beff080124552346e5efe 224 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 60 7.0E-5 T 17-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD13_12410 9dcfb708b45beff080124552346e5efe 224 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 30 44 7.0E-5 T 17-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD13_08740 65d1f7dc085b4e56c99fa742478a3a69 289 SUPERFAMILY SSF161098 27 275 2.9E-30 T 17-10-2018 IPR035906 MetI-like superfamily BJD13_08740 65d1f7dc085b4e56c99fa742478a3a69 289 Gene3D G3DSA:1.10.3720.10 66 286 1.2E-24 T 17-10-2018 IPR035906 MetI-like superfamily BJD13_08740 65d1f7dc085b4e56c99fa742478a3a69 289 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 19 284 1.3E-86 T 17-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 BJD13_08740 65d1f7dc085b4e56c99fa742478a3a69 289 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 279 2.0E-20 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD13_23135 14e6ec53cb7e86d39131c9b4d96715a2 194 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 193 30.03 T 17-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 BJD13_23135 14e6ec53cb7e86d39131c9b4d96715a2 194 SUPERFAMILY SSF46929 147 191 1.57E-7 T 17-10-2018 IPR036267 RuvA, C-terminal domain superfamily BJD13_23135 14e6ec53cb7e86d39131c9b4d96715a2 194 SMART SM00278 108 127 0.089 T 17-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 BJD13_23135 14e6ec53cb7e86d39131c9b4d96715a2 194 SMART SM00278 73 92 8.8 T 17-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 BJD13_23135 14e6ec53cb7e86d39131c9b4d96715a2 194 Pfam PF07499 RuvA, C-terminal domain 148 191 3.3E-8 T 17-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 BJD13_23135 14e6ec53cb7e86d39131c9b4d96715a2 194 Gene3D G3DSA:1.10.150.20 67 138 2.7E-25 T 17-10-2018 BJD13_23135 14e6ec53cb7e86d39131c9b4d96715a2 194 Gene3D G3DSA:2.40.50.140 1 65 1.4E-24 T 17-10-2018 BJD13_23135 14e6ec53cb7e86d39131c9b4d96715a2 194 Gene3D G3DSA:1.10.8.10 147 193 3.0E-11 T 17-10-2018 BJD13_23135 14e6ec53cb7e86d39131c9b4d96715a2 194 Pfam PF01330 RuvA N terminal domain 1 62 6.3E-19 T 17-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 BJD13_23135 14e6ec53cb7e86d39131c9b4d96715a2 194 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 193 2.1E-48 T 17-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 BJD13_23135 14e6ec53cb7e86d39131c9b4d96715a2 194 SUPERFAMILY SSF47781 66 134 1.33E-20 T 17-10-2018 IPR010994 RuvA domain 2-like BJD13_23135 14e6ec53cb7e86d39131c9b4d96715a2 194 Pfam PF14520 Helix-hairpin-helix domain 72 130 1.3E-17 T 17-10-2018 BJD13_23135 14e6ec53cb7e86d39131c9b4d96715a2 194 SUPERFAMILY SSF50249 1 63 1.6E-17 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD13_08960 e31041f71771e6287ff2dbc2a93b291d 404 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 17-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 BJD13_08960 e31041f71771e6287ff2dbc2a93b291d 404 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 174 401 1.4E-83 T 17-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 BJD13_08960 e31041f71771e6287ff2dbc2a93b291d 404 Pfam PF00364 Biotin-requiring enzyme 4 76 5.6E-19 T 17-10-2018 IPR000089 Biotin/lipoyl attachment BJD13_08960 e31041f71771e6287ff2dbc2a93b291d 404 Gene3D G3DSA:2.40.50.100 1 101 5.6E-23 T 17-10-2018 BJD13_08960 e31041f71771e6287ff2dbc2a93b291d 404 SUPERFAMILY SSF47005 118 162 2.88E-8 T 17-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 BJD13_08960 e31041f71771e6287ff2dbc2a93b291d 404 Gene3D G3DSA:4.10.320.10 125 164 4.4E-8 T 17-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 BJD13_08960 e31041f71771e6287ff2dbc2a93b291d 404 Pfam PF02817 e3 binding domain 127 157 1.1E-6 T 17-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 BJD13_08960 e31041f71771e6287ff2dbc2a93b291d 404 SUPERFAMILY SSF52777 174 402 1.2E-88 T 17-10-2018 BJD13_08960 e31041f71771e6287ff2dbc2a93b291d 404 Gene3D G3DSA:3.30.559.10 172 403 4.5E-96 T 17-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BJD13_08960 e31041f71771e6287ff2dbc2a93b291d 404 SUPERFAMILY SSF51230 1 96 3.53E-26 T 17-10-2018 IPR011053 Single hybrid motif BJD13_08960 e31041f71771e6287ff2dbc2a93b291d 404 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 403 2.6E-177 T 17-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 BJD13_03055 c77bfe001c95907a5f7d1649de09dbc6 405 PIRSF PIRSF001413 4 404 1.3E-154 T 17-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 BJD13_03055 c77bfe001c95907a5f7d1649de09dbc6 405 Gene3D G3DSA:3.40.50.1100 64 394 1.7E-178 T 17-10-2018 BJD13_03055 c77bfe001c95907a5f7d1649de09dbc6 405 SUPERFAMILY SSF53686 13 398 3.67E-143 T 17-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BJD13_03055 c77bfe001c95907a5f7d1649de09dbc6 405 Gene3D G3DSA:3.40.50.1100 20 216 1.7E-178 T 17-10-2018 BJD13_03055 c77bfe001c95907a5f7d1649de09dbc6 405 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 63 388 2.3E-45 T 17-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme BJD13_03055 c77bfe001c95907a5f7d1649de09dbc6 405 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 91 105 - T 17-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 BJD13_03055 c77bfe001c95907a5f7d1649de09dbc6 405 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 17 399 1.1E-185 T 17-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 BJD13_03055 c77bfe001c95907a5f7d1649de09dbc6 405 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 12 401 50.696 T 17-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 BJD13_12580 7ebc46f1683c4c4fadff77da555f6828 117 PIRSF PIRSF021239 6 117 2.2E-51 T 17-10-2018 IPR007437 Protein of unknown function DUF486 BJD13_12580 7ebc46f1683c4c4fadff77da555f6828 117 Pfam PF04342 Putative member of DMT superfamily (DUF486) 13 115 2.7E-45 T 17-10-2018 IPR007437 Protein of unknown function DUF486 BJD13_22540 07a6b14583a7704c682a5240289eb628 305 SMART SM00967 64 139 1.7E-13 T 17-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 BJD13_22540 07a6b14583a7704c682a5240289eb628 305 Gene3D G3DSA:3.40.1280.10 139 299 4.0E-36 T 17-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BJD13_22540 07a6b14583a7704c682a5240289eb628 305 SUPERFAMILY SSF75217 151 297 7.85E-31 T 17-10-2018 IPR029028 Alpha/beta knot methyltransferases BJD13_22540 07a6b14583a7704c682a5240289eb628 305 Gene3D G3DSA:3.30.1330.30 53 134 2.2E-10 T 17-10-2018 IPR029064 50S ribosomal protein L30e-like BJD13_22540 07a6b14583a7704c682a5240289eb628 305 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 65 133 4.2E-13 T 17-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 BJD13_22540 07a6b14583a7704c682a5240289eb628 305 Pfam PF00588 SpoU rRNA Methylase family 155 292 7.2E-29 T 17-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 BJD13_22540 07a6b14583a7704c682a5240289eb628 305 SUPERFAMILY SSF55315 60 133 6.59E-12 T 17-10-2018 IPR029064 50S ribosomal protein L30e-like BJD13_00245 1171d1285323e89757698e40b5bf1d04 906 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 49 - T 17-10-2018 IPR010916 TonB box, conserved site BJD13_00245 1171d1285323e89757698e40b5bf1d04 906 Gene3D G3DSA:2.170.130.10 37 177 1.1E-38 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_00245 1171d1285323e89757698e40b5bf1d04 906 Pfam PF00593 TonB dependent receptor 373 904 2.8E-46 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_00245 1171d1285323e89757698e40b5bf1d04 906 Pfam PF07715 TonB-dependent Receptor Plug Domain 60 172 1.7E-24 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_00245 1171d1285323e89757698e40b5bf1d04 906 SUPERFAMILY SSF56935 42 906 2.68E-103 T 17-10-2018 BJD13_17280 47d9c8d7e1281448b5bb41a0b69f44ed 190 Gene3D G3DSA:1.10.357.10 2 189 2.3E-47 T 17-10-2018 BJD13_17280 47d9c8d7e1281448b5bb41a0b69f44ed 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 7.4E-9 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD13_17280 47d9c8d7e1281448b5bb41a0b69f44ed 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 7.4E-9 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD13_17280 47d9c8d7e1281448b5bb41a0b69f44ed 190 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 63 5.1E-15 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD13_17280 47d9c8d7e1281448b5bb41a0b69f44ed 190 SUPERFAMILY SSF48498 83 184 1.49E-5 T 17-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BJD13_17280 47d9c8d7e1281448b5bb41a0b69f44ed 190 SUPERFAMILY SSF46689 6 80 1.25E-17 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_14440 deba0bef7462c782aebc912a44287a90 142 PIRSF PIRSF002181 1 142 7.4E-50 T 17-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 BJD13_14440 deba0bef7462c782aebc912a44287a90 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 3 142 6.5E-63 T 17-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_14440 deba0bef7462c782aebc912a44287a90 142 Gene3D G3DSA:3.90.1180.10 1 142 1.3E-61 T 17-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 BJD13_14440 deba0bef7462c782aebc912a44287a90 142 SUPERFAMILY SSF52161 1 140 9.81E-58 T 17-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 BJD13_14440 deba0bef7462c782aebc912a44287a90 142 Pfam PF00572 Ribosomal protein L13 15 138 3.2E-54 T 17-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 BJD13_14440 deba0bef7462c782aebc912a44287a90 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 27.915 T 17-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 BJD13_14440 deba0bef7462c782aebc912a44287a90 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 17-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 BJD13_10910 058b76906b3fa4851fdd129cd3b93bca 196 Gene3D G3DSA:1.10.10.60 6 74 4.9E-25 T 17-10-2018 BJD13_10910 058b76906b3fa4851fdd129cd3b93bca 196 SUPERFAMILY SSF46689 7 73 6.62E-14 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_10910 058b76906b3fa4851fdd129cd3b93bca 196 ProSitePatterns PS01081 TetR-type HTH domain signature. 32 62 - T 17-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BJD13_10910 058b76906b3fa4851fdd129cd3b93bca 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 65 2.4E-11 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD13_10910 058b76906b3fa4851fdd129cd3b93bca 196 Gene3D G3DSA:1.10.357.10 78 192 2.7E-9 T 17-10-2018 BJD13_10910 058b76906b3fa4851fdd129cd3b93bca 196 SUPERFAMILY SSF48498 87 188 6.67E-12 T 17-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BJD13_22200 2f2698644e5ed3a1766cd9c09a0003e1 717 Pfam PF17191 RecG wedge domain 24 180 5.7E-11 T 17-10-2018 IPR033454 RecG, wedge domain BJD13_22200 2f2698644e5ed3a1766cd9c09a0003e1 717 SUPERFAMILY SSF50249 17 183 2.06E-30 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD13_22200 2f2698644e5ed3a1766cd9c09a0003e1 717 SMART SM00487 276 470 1.0E-28 T 17-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BJD13_22200 2f2698644e5ed3a1766cd9c09a0003e1 717 SMART SM00490 529 613 5.1E-22 T 17-10-2018 IPR001650 Helicase, C-terminal BJD13_22200 2f2698644e5ed3a1766cd9c09a0003e1 717 Gene3D G3DSA:3.40.50.300 263 467 1.4E-78 T 17-10-2018 BJD13_22200 2f2698644e5ed3a1766cd9c09a0003e1 717 Gene3D G3DSA:3.40.50.300 468 654 1.2E-52 T 17-10-2018 BJD13_22200 2f2698644e5ed3a1766cd9c09a0003e1 717 Pfam PF00270 DEAD/DEAH box helicase 284 442 1.3E-14 T 17-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BJD13_22200 2f2698644e5ed3a1766cd9c09a0003e1 717 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 37 686 5.2E-213 T 17-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 BJD13_22200 2f2698644e5ed3a1766cd9c09a0003e1 717 SUPERFAMILY SSF52540 193 464 1.14E-55 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_22200 2f2698644e5ed3a1766cd9c09a0003e1 717 SUPERFAMILY SSF52540 463 678 1.22E-42 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_22200 2f2698644e5ed3a1766cd9c09a0003e1 717 Pfam PF00271 Helicase conserved C-terminal domain 535 612 9.9E-17 T 17-10-2018 IPR001650 Helicase, C-terminal BJD13_22200 2f2698644e5ed3a1766cd9c09a0003e1 717 Gene3D G3DSA:2.40.50.140 55 148 2.3E-6 T 17-10-2018 BJD13_01770 becc9f2aa2b4e5f2ae348e60c216d325 152 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 16 143 3.3E-30 T 17-10-2018 IPR002178 PTS EIIA type-2 domain BJD13_01770 becc9f2aa2b4e5f2ae348e60c216d325 152 Gene3D G3DSA:3.40.930.10 6 145 1.7E-36 T 17-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BJD13_01770 becc9f2aa2b4e5f2ae348e60c216d325 152 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 49 65 - T 17-10-2018 IPR002178 PTS EIIA type-2 domain BJD13_01770 becc9f2aa2b4e5f2ae348e60c216d325 152 SUPERFAMILY SSF55804 16 142 6.02E-32 T 17-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BJD13_03965 aea3f0142097b6af13eb5219f890efa4 202 Pfam PF13643 Domain of unknown function (DUF4145) 105 182 5.2E-6 T 17-10-2018 IPR025285 Domain of unknown function DUF4145 BJD13_21040 7736ebdf8b76c4e38bca78b70ffd3f99 171 Pfam PF07977 FabA-like domain 28 158 3.8E-51 T 17-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BJD13_21040 7736ebdf8b76c4e38bca78b70ffd3f99 171 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 1 171 49.856 T 17-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BJD13_21040 7736ebdf8b76c4e38bca78b70ffd3f99 171 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 3 171 2.8E-93 T 17-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BJD13_21040 7736ebdf8b76c4e38bca78b70ffd3f99 171 Gene3D G3DSA:3.10.129.10 1 171 9.9E-65 T 17-10-2018 BJD13_21040 7736ebdf8b76c4e38bca78b70ffd3f99 171 SUPERFAMILY SSF54637 2 169 1.58E-54 T 17-10-2018 IPR029069 HotDog domain superfamily BJD13_20845 4e397086ff6bddeb78b055e57cca5575 186 SUPERFAMILY SSF52141 23 184 1.57E-39 T 17-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BJD13_20845 4e397086ff6bddeb78b055e57cca5575 186 TIGRFAM TIGR04274 hypoxanDNAglyco: DNA-deoxyinosine glycosylase 22 178 1.9E-41 T 17-10-2018 IPR026353 Hypoxanthine-DNA glycosylase BJD13_20845 4e397086ff6bddeb78b055e57cca5575 186 SMART SM00987 24 179 4.3E-11 T 17-10-2018 BJD13_20845 4e397086ff6bddeb78b055e57cca5575 186 SMART SM00986 24 179 4.3E-11 T 17-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BJD13_20845 4e397086ff6bddeb78b055e57cca5575 186 Pfam PF03167 Uracil DNA glycosylase superfamily 27 179 4.9E-12 T 17-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BJD13_20845 4e397086ff6bddeb78b055e57cca5575 186 Gene3D G3DSA:3.40.470.10 18 186 8.7E-49 T 17-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BJD13_14315 48eb1c72ef3ebf8bfb4c77a90f2cdbd9 527 PIRSF PIRSF000414 2 527 4.2E-211 T 17-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BJD13_14315 48eb1c72ef3ebf8bfb4c77a90f2cdbd9 527 Pfam PF01808 AICARFT/IMPCHase bienzyme 138 457 2.7E-112 T 17-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BJD13_14315 48eb1c72ef3ebf8bfb4c77a90f2cdbd9 527 Gene3D G3DSA:3.40.140.20 391 527 3.7E-59 T 17-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BJD13_14315 48eb1c72ef3ebf8bfb4c77a90f2cdbd9 527 SMART SM00851 20 133 9.0E-50 T 17-10-2018 IPR011607 Methylglyoxal synthase-like domain BJD13_14315 48eb1c72ef3ebf8bfb4c77a90f2cdbd9 527 Gene3D G3DSA:3.40.140.20 218 372 3.5E-56 T 17-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BJD13_14315 48eb1c72ef3ebf8bfb4c77a90f2cdbd9 527 SUPERFAMILY SSF52335 8 197 1.96E-63 T 17-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily BJD13_14315 48eb1c72ef3ebf8bfb4c77a90f2cdbd9 527 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 8 527 44.492 T 17-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BJD13_14315 48eb1c72ef3ebf8bfb4c77a90f2cdbd9 527 SUPERFAMILY SSF53927 220 527 5.01E-126 T 17-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 BJD13_14315 48eb1c72ef3ebf8bfb4c77a90f2cdbd9 527 Gene3D G3DSA:3.40.50.1380 2 202 6.0E-79 T 17-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily BJD13_14315 48eb1c72ef3ebf8bfb4c77a90f2cdbd9 527 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 9 527 3.6E-217 T 17-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BJD13_14315 48eb1c72ef3ebf8bfb4c77a90f2cdbd9 527 Pfam PF02142 MGS-like domain 20 132 2.1E-24 T 17-10-2018 IPR011607 Methylglyoxal synthase-like domain BJD13_14315 48eb1c72ef3ebf8bfb4c77a90f2cdbd9 527 SMART SM00798 138 459 4.2E-189 T 17-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BJD13_12130 476354172630a481c643a5ebebf2b3b6 161 PRINTS PR00139 Asparaginase/glutaminase family signature 4 15 8.9E-6 T 17-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 BJD13_12130 476354172630a481c643a5ebebf2b3b6 161 PRINTS PR00139 Asparaginase/glutaminase family signature 75 93 8.9E-6 T 17-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 BJD13_12130 476354172630a481c643a5ebebf2b3b6 161 Pfam PF00710 Asparaginase, N-terminal 4 155 1.7E-23 T 17-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 BJD13_12130 476354172630a481c643a5ebebf2b3b6 161 Gene3D G3DSA:3.40.50.1170 2 161 1.4E-30 T 17-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 BJD13_12130 476354172630a481c643a5ebebf2b3b6 161 SUPERFAMILY SSF53774 1 156 3.79E-33 T 17-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 BJD13_10135 fd9f3aed1879b0d43459a8f65cd8635d 135 Pfam PF01479 S4 domain 11 56 1.2E-7 T 17-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_10135 fd9f3aed1879b0d43459a8f65cd8635d 135 Gene3D G3DSA:3.10.290.10 5 109 1.5E-32 T 17-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 BJD13_10135 fd9f3aed1879b0d43459a8f65cd8635d 135 SUPERFAMILY SSF55174 9 105 3.66E-24 T 17-10-2018 BJD13_10135 fd9f3aed1879b0d43459a8f65cd8635d 135 SMART SM00363 11 73 0.0026 T 17-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_08225 39dce65eaaba9c7d431c7c0304599f68 68 Pfam PF04995 Heme exporter protein D (CcmD) 8 50 1.9E-15 T 17-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 BJD13_08225 39dce65eaaba9c7d431c7c0304599f68 68 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 5 51 1.1E-18 T 17-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 BJD13_04300 de8f73af6f976fb610f38e6b92ab1c21 169 Gene3D G3DSA:2.40.50.180 37 150 3.3E-37 T 17-10-2018 BJD13_04300 de8f73af6f976fb610f38e6b92ab1c21 169 SUPERFAMILY SSF50341 18 157 1.83E-32 T 17-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 BJD13_04300 de8f73af6f976fb610f38e6b92ab1c21 169 SMART SM00260 14 155 3.7E-26 T 17-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BJD13_04300 de8f73af6f976fb610f38e6b92ab1c21 169 Pfam PF01584 CheW-like domain 18 156 1.5E-33 T 17-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BJD13_04300 de8f73af6f976fb610f38e6b92ab1c21 169 Gene3D G3DSA:2.30.30.40 20 149 3.3E-37 T 17-10-2018 BJD13_13370 725f4e7507c1258ee626c5c4b3c704d5 353 Gene3D G3DSA:2.40.128.140 40 350 2.9E-81 T 17-10-2018 IPR037107 Putative outer membrane protein superfamily BJD13_13370 725f4e7507c1258ee626c5c4b3c704d5 353 Pfam PF09982 Uncharacterized protein conserved in bacteria (DUF2219) 44 350 3.4E-92 T 17-10-2018 IPR018707 Protein of unknown function DUF2219 BJD13_17660 8bc02f2e9c15326f0365302b089eb2f7 344 SUPERFAMILY SSF75005 12 330 4.11E-55 T 17-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily BJD13_17660 8bc02f2e9c15326f0365302b089eb2f7 344 Gene3D G3DSA:2.115.10.20 4 336 1.4E-94 T 17-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily BJD13_17660 8bc02f2e9c15326f0365302b089eb2f7 344 Pfam PF04616 Glycosyl hydrolases family 43 88 330 8.0E-26 T 17-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 BJD13_17900 ede73128493bb77609209a69b88bfe21 302 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 10 302 8.0E-159 T 17-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BJD13_17900 ede73128493bb77609209a69b88bfe21 302 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 63 78 1.9E-67 T 17-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BJD13_17900 ede73128493bb77609209a69b88bfe21 302 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 141 161 1.9E-67 T 17-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BJD13_17900 ede73128493bb77609209a69b88bfe21 302 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 164 179 1.9E-67 T 17-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BJD13_17900 ede73128493bb77609209a69b88bfe21 302 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 254 270 1.9E-67 T 17-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BJD13_17900 ede73128493bb77609209a69b88bfe21 302 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 115 139 1.9E-67 T 17-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BJD13_17900 ede73128493bb77609209a69b88bfe21 302 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 84 104 1.9E-67 T 17-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BJD13_17900 ede73128493bb77609209a69b88bfe21 302 SUPERFAMILY SSF55681 10 293 4.47E-132 T 17-10-2018 BJD13_17900 ede73128493bb77609209a69b88bfe21 302 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 11 293 1.2E-146 T 17-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BJD13_17900 ede73128493bb77609209a69b88bfe21 302 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 9 294 59.504 T 17-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BJD13_17900 ede73128493bb77609209a69b88bfe21 302 Gene3D G3DSA:1.20.58.180 218 299 3.8E-33 T 17-10-2018 BJD13_17900 ede73128493bb77609209a69b88bfe21 302 Gene3D G3DSA:3.30.930.10 3 217 3.9E-109 T 17-10-2018 BJD13_23360 63f22f6079d2c9211cc179ab306f04be 662 SMART SM00491 495 623 1.3E-36 T 17-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 BJD13_23360 63f22f6079d2c9211cc179ab306f04be 662 Gene3D G3DSA:3.40.50.300 471 654 1.5E-34 T 17-10-2018 BJD13_23360 63f22f6079d2c9211cc179ab306f04be 662 Pfam PF13307 Helicase C-terminal domain 480 636 1.2E-34 T 17-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 BJD13_23360 63f22f6079d2c9211cc179ab306f04be 662 Gene3D G3DSA:3.40.50.300 26 268 1.6E-41 T 17-10-2018 BJD13_23360 63f22f6079d2c9211cc179ab306f04be 662 SUPERFAMILY SSF52540 100 615 5.61E-5 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_23360 63f22f6079d2c9211cc179ab306f04be 662 SUPERFAMILY SSF52540 19 620 7.03E-23 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_00650 13027ce7c7862d7e9fd9d8308b06ed8b 151 Gene3D G3DSA:2.10.109.10 34 150 7.9E-9 T 17-10-2018 BJD13_00650 13027ce7c7862d7e9fd9d8308b06ed8b 151 SUPERFAMILY SSF51306 31 151 7.32E-15 T 17-10-2018 IPR036286 LexA/Signal peptidase-like superfamily BJD13_00650 13027ce7c7862d7e9fd9d8308b06ed8b 151 Pfam PF10502 Signal peptidase, peptidase S26 64 151 5.4E-11 T 17-10-2018 IPR019533 Peptidase S26 BJD13_09185 36485eff3c71366fdd90d466275d01fc 212 Pfam PF02798 Glutathione S-transferase, N-terminal domain 7 82 3.6E-16 T 17-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 BJD13_09185 36485eff3c71366fdd90d466275d01fc 212 Gene3D G3DSA:3.40.30.10 8 87 2.8E-24 T 17-10-2018 BJD13_09185 36485eff3c71366fdd90d466275d01fc 212 Gene3D G3DSA:1.20.1050.10 88 202 5.0E-40 T 17-10-2018 BJD13_09185 36485eff3c71366fdd90d466275d01fc 212 SUPERFAMILY SSF52833 7 103 1.52E-21 T 17-10-2018 IPR036249 Thioredoxin-like superfamily BJD13_09185 36485eff3c71366fdd90d466275d01fc 212 Pfam PF00043 Glutathione S-transferase, C-terminal domain 122 198 6.7E-9 T 17-10-2018 IPR004046 Glutathione S-transferase, C-terminal BJD13_09185 36485eff3c71366fdd90d466275d01fc 212 SUPERFAMILY SSF47616 83 203 7.78E-28 T 17-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily BJD13_13765 14855ed189f5904ade25a644c27e42ad 624 Pfam PF00990 Diguanylate cyclase, GGDEF domain 464 620 5.8E-37 T 17-10-2018 IPR000160 GGDEF domain BJD13_13765 14855ed189f5904ade25a644c27e42ad 624 SMART SM00267 453 624 5.5E-50 T 17-10-2018 IPR000160 GGDEF domain BJD13_13765 14855ed189f5904ade25a644c27e42ad 624 Gene3D G3DSA:1.25.40.10 187 427 1.4E-8 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_13765 14855ed189f5904ade25a644c27e42ad 624 SUPERFAMILY SSF48452 213 387 1.44E-6 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_13765 14855ed189f5904ade25a644c27e42ad 624 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 460 622 1.6E-36 T 17-10-2018 IPR000160 GGDEF domain BJD13_13765 14855ed189f5904ade25a644c27e42ad 624 SUPERFAMILY SSF55073 469 623 2.98E-40 T 17-10-2018 IPR029787 Nucleotide cyclase BJD13_13765 14855ed189f5904ade25a644c27e42ad 624 Gene3D G3DSA:3.30.70.270 454 624 1.3E-49 T 17-10-2018 BJD13_20685 c168dec12c14663c649c0650f5ad8bdc 284 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 17-10-2018 IPR000540 Flagellar motor protein MotA, conserved site BJD13_20685 c168dec12c14663c649c0650f5ad8bdc 284 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 1 281 5.8E-123 T 17-10-2018 IPR022522 Flagellar motor stator, MotA BJD13_20685 c168dec12c14663c649c0650f5ad8bdc 284 Pfam PF01618 MotA/TolQ/ExbB proton channel family 138 232 8.6E-8 T 17-10-2018 IPR002898 MotA/TolQ/ExbB proton channel BJD13_05255 67929147757af64184c5b44177a4ac27 377 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 50 354 2.0E-94 T 17-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 BJD13_05255 67929147757af64184c5b44177a4ac27 377 Gene3D G3DSA:2.40.30.170 59 282 1.5E-69 T 17-10-2018 BJD13_05255 67929147757af64184c5b44177a4ac27 377 Gene3D G3DSA:2.40.50.100 74 206 1.5E-69 T 17-10-2018 BJD13_05255 67929147757af64184c5b44177a4ac27 377 Gene3D G3DSA:1.10.287.470 108 167 1.5E-69 T 17-10-2018 BJD13_05255 67929147757af64184c5b44177a4ac27 377 Pfam PF00529 HlyD membrane-fusion protein of T1SS 275 340 1.8E-7 T 17-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 BJD13_05255 67929147757af64184c5b44177a4ac27 377 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 63 274 7.1E-29 T 17-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BJD13_05255 67929147757af64184c5b44177a4ac27 377 Gene3D G3DSA:2.40.420.20 56 352 1.5E-69 T 17-10-2018 BJD13_05255 67929147757af64184c5b44177a4ac27 377 SUPERFAMILY SSF111369 68 280 1.26E-37 T 17-10-2018 BJD13_10070 adff6cc11c2aa8a4a953431214537f2a 854 SUPERFAMILY SSF49303 260 363 6.04E-16 T 17-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily BJD13_10070 adff6cc11c2aa8a4a953431214537f2a 854 SUPERFAMILY SSF51445 369 651 1.32E-71 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily BJD13_10070 adff6cc11c2aa8a4a953431214537f2a 854 Pfam PF00703 Glycosyl hydrolases family 2 253 363 1.0E-15 T 17-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 BJD13_10070 adff6cc11c2aa8a4a953431214537f2a 854 Gene3D G3DSA:2.60.40.10 737 846 2.5E-36 T 17-10-2018 IPR013783 Immunoglobulin-like fold BJD13_10070 adff6cc11c2aa8a4a953431214537f2a 854 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 372 532 1.4E-27 T 17-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 BJD13_10070 adff6cc11c2aa8a4a953431214537f2a 854 Pfam PF16355 Domain of unknown function (DUF4982) 672 726 7.6E-15 T 17-10-2018 IPR032311 Domain of unknown function DUF4982 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 BJD13_10070 adff6cc11c2aa8a4a953431214537f2a 854 Gene3D G3DSA:2.60.120.260 38 249 2.1E-42 T 17-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD13_10070 adff6cc11c2aa8a4a953431214537f2a 854 Gene3D G3DSA:3.20.20.80 365 651 5.7E-98 T 17-10-2018 BJD13_10070 adff6cc11c2aa8a4a953431214537f2a 854 SUPERFAMILY SSF49785 56 251 1.34E-41 T 17-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD13_10070 adff6cc11c2aa8a4a953431214537f2a 854 PRINTS PR00132 Glycosyl hydrolase family 2 signature 375 389 2.1E-6 T 17-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 BJD13_10070 adff6cc11c2aa8a4a953431214537f2a 854 PRINTS PR00132 Glycosyl hydrolase family 2 signature 464 479 2.1E-6 T 17-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 BJD13_10070 adff6cc11c2aa8a4a953431214537f2a 854 Gene3D G3DSA:2.60.40.10 251 363 3.0E-24 T 17-10-2018 IPR013783 Immunoglobulin-like fold BJD13_10070 adff6cc11c2aa8a4a953431214537f2a 854 Gene3D G3DSA:2.60.40.10 652 734 4.9E-22 T 17-10-2018 IPR013783 Immunoglobulin-like fold BJD13_10070 adff6cc11c2aa8a4a953431214537f2a 854 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 67 248 9.4E-18 T 17-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 BJD13_22580 98cfbc683cf88fa90fb1a55547720d60 472 Pfam PF04389 Peptidase family M28 255 444 3.0E-24 T 17-10-2018 IPR007484 Peptidase M28 BJD13_22580 98cfbc683cf88fa90fb1a55547720d60 472 Gene3D G3DSA:3.50.30.30 99 244 2.9E-138 T 17-10-2018 BJD13_22580 98cfbc683cf88fa90fb1a55547720d60 472 SUPERFAMILY SSF53187 49 456 2.08E-49 T 17-10-2018 BJD13_22580 98cfbc683cf88fa90fb1a55547720d60 472 Gene3D G3DSA:3.40.630.10 48 448 2.9E-138 T 17-10-2018 BJD13_19505 28f536030cb875ab8c233aeaa8aa17ed 1066 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 848 859 - T 17-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 BJD13_19505 28f536030cb875ab8c233aeaa8aa17ed 1066 Gene3D G3DSA:3.40.605.10 573 1048 1.6E-152 T 17-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 BJD13_19505 28f536030cb875ab8c233aeaa8aa17ed 1066 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 83 196 2.0E-44 T 17-10-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 BJD13_19505 28f536030cb875ab8c233aeaa8aa17ed 1066 SUPERFAMILY SSF51730 199 544 1.22E-113 T 17-10-2018 IPR029041 FAD-linked oxidoreductase-like BJD13_19505 28f536030cb875ab8c233aeaa8aa17ed 1066 SUPERFAMILY SSF53720 586 1051 5.5E-126 T 17-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BJD13_19505 28f536030cb875ab8c233aeaa8aa17ed 1066 SUPERFAMILY SSF81935 27 198 1.31E-63 T 17-10-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 BJD13_19505 28f536030cb875ab8c233aeaa8aa17ed 1066 Pfam PF01619 Proline dehydrogenase 210 501 1.5E-91 T 17-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 BJD13_19505 28f536030cb875ab8c233aeaa8aa17ed 1066 PIRSF PIRSF000197 13 1062 0.0 T 17-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 BJD13_19505 28f536030cb875ab8c233aeaa8aa17ed 1066 Gene3D G3DSA:3.20.20.220 25 130 4.8E-10 T 17-10-2018 BJD13_19505 28f536030cb875ab8c233aeaa8aa17ed 1066 Gene3D G3DSA:3.40.309.10 823 1015 1.6E-152 T 17-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 BJD13_19505 28f536030cb875ab8c233aeaa8aa17ed 1066 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 543 1044 5.4E-213 T 17-10-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 BJD13_19505 28f536030cb875ab8c233aeaa8aa17ed 1066 Pfam PF00171 Aldehyde dehydrogenase family 590 1048 1.2E-115 T 17-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 BJD13_19505 28f536030cb875ab8c233aeaa8aa17ed 1066 Gene3D G3DSA:3.20.20.220 155 536 9.0E-136 T 17-10-2018 BJD13_01810 2c56938dc0c6ab61633e78cd50cba1a5 75 PIRSF PIRSF003113 2 75 1.4E-23 T 17-10-2018 IPR002634 BolA protein BJD13_01810 2c56938dc0c6ab61633e78cd50cba1a5 75 SUPERFAMILY SSF82657 3 74 5.75E-25 T 17-10-2018 IPR036065 BolA-like superfamily BJD13_01810 2c56938dc0c6ab61633e78cd50cba1a5 75 Gene3D G3DSA:3.30.300.90 1 75 4.0E-33 T 17-10-2018 BJD13_01810 2c56938dc0c6ab61633e78cd50cba1a5 75 Pfam PF01722 BolA-like protein 21 74 4.1E-19 T 17-10-2018 IPR002634 BolA protein BJD13_17860 85053578e7a5f2ba7e0ca84f06b11463 75 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 69 21.868 T 17-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 BJD13_17860 85053578e7a5f2ba7e0ca84f06b11463 75 Pfam PF02416 mttA/Hcf106 family 5 48 9.9E-15 T 17-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 BJD13_17860 85053578e7a5f2ba7e0ca84f06b11463 75 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 5.8E-23 T 17-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 BJD13_10535 29b0317505c42908a9ebfdfc88e8e2ca 269 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 226 4.1E-23 T 17-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain BJD13_10535 29b0317505c42908a9ebfdfc88e8e2ca 269 PIRSF PIRSF003092 1 269 2.7E-90 T 17-10-2018 IPR025501 ATP binding protein MinD BJD13_10535 29b0317505c42908a9ebfdfc88e8e2ca 269 Gene3D G3DSA:3.40.50.300 1 259 2.3E-69 T 17-10-2018 BJD13_10535 29b0317505c42908a9ebfdfc88e8e2ca 269 SUPERFAMILY SSF52540 4 267 1.99E-54 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_10535 29b0317505c42908a9ebfdfc88e8e2ca 269 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 266 5.8E-110 T 17-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 BJD13_01905 24863df315705dbcb0b2e4805607d505 324 Gene3D G3DSA:3.10.520.20 4 324 2.9E-102 T 17-10-2018 BJD13_01905 24863df315705dbcb0b2e4805607d505 324 Pfam PF02424 ApbE family 19 298 1.1E-76 T 17-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 BJD13_01905 24863df315705dbcb0b2e4805607d505 324 SUPERFAMILY SSF143631 13 321 1.57E-90 T 17-10-2018 IPR003374 ApbE-like superfamily BJD13_01905 24863df315705dbcb0b2e4805607d505 324 PIRSF PIRSF006268 3 321 2.3E-77 T 17-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 BJD13_08415 a22cbb1a306c65899a98c454e7d7f254 555 Pfam PF17392 Urocanase C-terminal domain 350 544 2.6E-92 T 17-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BJD13_08415 a22cbb1a306c65899a98c454e7d7f254 555 ProSitePatterns PS01233 Urocanase signature. 440 455 - T 17-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BJD13_08415 a22cbb1a306c65899a98c454e7d7f254 555 Pfam PF17391 Urocanase N-terminal domain 10 136 5.3E-61 T 17-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BJD13_08415 a22cbb1a306c65899a98c454e7d7f254 555 Gene3D G3DSA:3.40.1770.10 15 540 2.3E-255 T 17-10-2018 BJD13_08415 a22cbb1a306c65899a98c454e7d7f254 555 Hamap MF_00577 Urocanate hydratase [hutU]. 3 554 49.825 T 17-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BJD13_08415 a22cbb1a306c65899a98c454e7d7f254 555 Gene3D G3DSA:3.40.50.10730 140 347 2.3E-255 T 17-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BJD13_08415 a22cbb1a306c65899a98c454e7d7f254 555 SUPERFAMILY SSF111326 4 552 2.35E-258 T 17-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BJD13_08415 a22cbb1a306c65899a98c454e7d7f254 555 TIGRFAM TIGR01228 hutU: urocanate hydratase 9 551 2.9E-285 T 17-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BJD13_08415 a22cbb1a306c65899a98c454e7d7f254 555 Pfam PF01175 Urocanase Rossmann-like domain 139 347 8.5E-84 T 17-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BJD13_08415 a22cbb1a306c65899a98c454e7d7f254 555 PIRSF PIRSF001423 1 555 1.9E-288 T 17-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BJD13_07715 3c6cbc9ffd394c96fe1e3c402b2939c8 967 Pfam PF07691 PA14 domain 275 351 5.0E-10 T 17-10-2018 IPR011658 PA14 domain BJD13_07715 3c6cbc9ffd394c96fe1e3c402b2939c8 967 SUPERFAMILY SSF51011 760 839 1.29E-21 T 17-10-2018 BJD13_07715 3c6cbc9ffd394c96fe1e3c402b2939c8 967 Pfam PF17137 Domain of unknown function (DUF5110) 860 928 4.5E-20 T 17-10-2018 IPR033403 Domain of unknown function DUF5110 BJD13_07715 3c6cbc9ffd394c96fe1e3c402b2939c8 967 Pfam PF16338 Domain of unknown function (DUF4968) 55 135 7.8E-14 T 17-10-2018 IPR032513 Alpha-glucosidase, domain of unknown function DUF4968 BJD13_07715 3c6cbc9ffd394c96fe1e3c402b2939c8 967 Gene3D G3DSA:2.60.40.1180 841 958 5.7E-32 T 17-10-2018 IPR013780 Glycosyl hydrolase, all-beta BJD13_07715 3c6cbc9ffd394c96fe1e3c402b2939c8 967 Pfam PF01055 Glycosyl hydrolases family 31 388 844 5.1E-127 T 17-10-2018 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 BJD13_07715 3c6cbc9ffd394c96fe1e3c402b2939c8 967 Gene3D G3DSA:3.20.20.80 408 760 1.8E-128 T 17-10-2018 BJD13_07715 3c6cbc9ffd394c96fe1e3c402b2939c8 967 SMART SM00758 238 376 5.1E-29 T 17-10-2018 IPR011658 PA14 domain BJD13_07715 3c6cbc9ffd394c96fe1e3c402b2939c8 967 SUPERFAMILY SSF51445 398 754 4.48E-48 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily BJD13_07715 3c6cbc9ffd394c96fe1e3c402b2939c8 967 SUPERFAMILY SSF56988 255 351 3.4E-11 T 17-10-2018 BJD13_07715 3c6cbc9ffd394c96fe1e3c402b2939c8 967 Gene3D G3DSA:2.60.120.380 223 366 1.0E-146 T 17-10-2018 BJD13_07715 3c6cbc9ffd394c96fe1e3c402b2939c8 967 Gene3D G3DSA:2.60.40.1760 43 407 1.0E-146 T 17-10-2018 BJD13_07715 3c6cbc9ffd394c96fe1e3c402b2939c8 967 SUPERFAMILY SSF74650 57 216 8.16E-26 T 17-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 BJD13_07715 3c6cbc9ffd394c96fe1e3c402b2939c8 967 Gene3D G3DSA:2.60.40.1180 764 840 4.4E-30 T 17-10-2018 IPR013780 Glycosyl hydrolase, all-beta BJD13_11660 ebe272929c0d734800623e0252e4d039 238 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 1 238 1.2E-75 T 17-10-2018 IPR010239 Conserved hypothetical protein CHP02001 BJD13_11660 ebe272929c0d734800623e0252e4d039 238 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 26 224 4.1E-25 T 17-10-2018 IPR010239 Conserved hypothetical protein CHP02001 BJD13_21355 d530b11efd78d458d2d56ea5d988f109 490 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 342 349 - T 17-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 BJD13_21355 d530b11efd78d458d2d56ea5d988f109 490 SUPERFAMILY SSF53187 175 488 5.34E-119 T 17-10-2018 BJD13_21355 d530b11efd78d458d2d56ea5d988f109 490 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 181 481 1.9E-118 T 17-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 BJD13_21355 d530b11efd78d458d2d56ea5d988f109 490 SUPERFAMILY SSF52949 4 179 2.88E-39 T 17-10-2018 BJD13_21355 d530b11efd78d458d2d56ea5d988f109 490 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 5 490 35.589 T 17-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 BJD13_21355 d530b11efd78d458d2d56ea5d988f109 490 Gene3D G3DSA:3.40.630.10 174 490 3.6E-141 T 17-10-2018 BJD13_21355 d530b11efd78d458d2d56ea5d988f109 490 PRINTS PR00481 Cytosol aminopeptidase signature 366 381 3.8E-50 T 17-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BJD13_21355 d530b11efd78d458d2d56ea5d988f109 490 PRINTS PR00481 Cytosol aminopeptidase signature 338 358 3.8E-50 T 17-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BJD13_21355 d530b11efd78d458d2d56ea5d988f109 490 PRINTS PR00481 Cytosol aminopeptidase signature 279 300 3.8E-50 T 17-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BJD13_21355 d530b11efd78d458d2d56ea5d988f109 490 PRINTS PR00481 Cytosol aminopeptidase signature 316 337 3.8E-50 T 17-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BJD13_21355 d530b11efd78d458d2d56ea5d988f109 490 PRINTS PR00481 Cytosol aminopeptidase signature 257 274 3.8E-50 T 17-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BJD13_21355 d530b11efd78d458d2d56ea5d988f109 490 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 21 145 6.2E-29 T 17-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 BJD13_21355 d530b11efd78d458d2d56ea5d988f109 490 Gene3D G3DSA:3.40.220.10 3 161 7.3E-44 T 17-10-2018 BJD13_19995 8a670b4653a7dda4f5f89236c6f92766 625 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 386 611 1.5E-39 T 17-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BJD13_19995 8a670b4653a7dda4f5f89236c6f92766 625 SUPERFAMILY SSF88946 121 457 2.51E-99 T 17-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BJD13_19995 8a670b4653a7dda4f5f89236c6f92766 625 Pfam PF04546 Sigma-70, non-essential region 145 359 5.0E-51 T 17-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BJD13_19995 8a670b4653a7dda4f5f89236c6f92766 625 Gene3D G3DSA:1.10.220.120 5 67 2.9E-27 T 17-10-2018 BJD13_19995 8a670b4653a7dda4f5f89236c6f92766 625 Gene3D G3DSA:1.10.10.10 463 539 3.2E-33 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_19995 8a670b4653a7dda4f5f89236c6f92766 625 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 414 427 - T 17-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BJD13_19995 8a670b4653a7dda4f5f89236c6f92766 625 SUPERFAMILY SSF88659 520 622 1.77E-27 T 17-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BJD13_19995 8a670b4653a7dda4f5f89236c6f92766 625 Pfam PF00140 Sigma-70 factor, region 1.2 104 135 5.4E-13 T 17-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BJD13_19995 8a670b4653a7dda4f5f89236c6f92766 625 PRINTS PR00046 Major sigma-70 factor signature 414 427 3.3E-31 T 17-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BJD13_19995 8a670b4653a7dda4f5f89236c6f92766 625 PRINTS PR00046 Major sigma-70 factor signature 583 598 3.3E-31 T 17-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BJD13_19995 8a670b4653a7dda4f5f89236c6f92766 625 PRINTS PR00046 Major sigma-70 factor signature 562 574 3.3E-31 T 17-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BJD13_19995 8a670b4653a7dda4f5f89236c6f92766 625 PRINTS PR00046 Major sigma-70 factor signature 438 446 3.3E-31 T 17-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BJD13_19995 8a670b4653a7dda4f5f89236c6f92766 625 PRINTS PR00046 Major sigma-70 factor signature 598 609 3.3E-31 T 17-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BJD13_19995 8a670b4653a7dda4f5f89236c6f92766 625 Gene3D G3DSA:1.10.10.10 540 623 2.3E-36 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_19995 8a670b4653a7dda4f5f89236c6f92766 625 Pfam PF04545 Sigma-70, region 4 558 611 1.8E-19 T 17-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 BJD13_19995 8a670b4653a7dda4f5f89236c6f92766 625 Pfam PF04542 Sigma-70 region 2 390 459 1.7E-21 T 17-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BJD13_19995 8a670b4653a7dda4f5f89236c6f92766 625 Gene3D G3DSA:1.10.601.10 119 459 1.6E-121 T 17-10-2018 BJD13_19995 8a670b4653a7dda4f5f89236c6f92766 625 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 386 622 1.0E-121 T 17-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 BJD13_19995 8a670b4653a7dda4f5f89236c6f92766 625 SUPERFAMILY SSF88659 463 536 2.94E-21 T 17-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BJD13_19995 8a670b4653a7dda4f5f89236c6f92766 625 Pfam PF03979 Sigma-70 factor, region 1.1 8 87 1.3E-28 T 17-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 BJD13_19995 8a670b4653a7dda4f5f89236c6f92766 625 Pfam PF04539 Sigma-70 region 3 469 545 1.2E-30 T 17-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 BJD13_19995 8a670b4653a7dda4f5f89236c6f92766 625 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 583 609 - T 17-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BJD13_19995 8a670b4653a7dda4f5f89236c6f92766 625 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 7 623 45.772 T 17-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 BJD13_22630 3a10fdcb3c18d7884b22414d51d54817 594 SUPERFAMILY SSF103515 323 563 6.54E-34 T 17-10-2018 IPR036709 Autotransporter beta-domain superfamily BJD13_22630 3a10fdcb3c18d7884b22414d51d54817 594 Gene3D G3DSA:2.40.128.130 301 594 5.5E-47 T 17-10-2018 IPR036709 Autotransporter beta-domain superfamily BJD13_22630 3a10fdcb3c18d7884b22414d51d54817 594 Pfam PF03797 Autotransporter beta-domain 331 561 9.5E-42 T 17-10-2018 IPR005546 Autotransporter beta-domain BJD13_22630 3a10fdcb3c18d7884b22414d51d54817 594 PIRSF PIRSF037375 1 594 7.2E-203 T 17-10-2018 IPR017186 Lipase, autotransporter EstA BJD13_22630 3a10fdcb3c18d7884b22414d51d54817 594 Gene3D G3DSA:3.40.50.1110 9 297 5.8E-79 T 17-10-2018 IPR036514 SGNH hydrolase superfamily BJD13_22630 3a10fdcb3c18d7884b22414d51d54817 594 SUPERFAMILY SSF52266 22 292 1.67E-15 T 17-10-2018 BJD13_22630 3a10fdcb3c18d7884b22414d51d54817 594 SMART SM00869 327 584 1.5E-33 T 17-10-2018 IPR005546 Autotransporter beta-domain BJD13_22630 3a10fdcb3c18d7884b22414d51d54817 594 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 22 286 6.7E-10 T 17-10-2018 IPR001087 GDSL lipase/esterase GO:0016788 BJD13_02400 ba2e03ed7673667512678ef3bb57b9db 226 SUPERFAMILY SSF46689 10 92 3.23E-18 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_02400 ba2e03ed7673667512678ef3bb57b9db 226 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 65 2.0E-18 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD13_02400 ba2e03ed7673667512678ef3bb57b9db 226 SUPERFAMILY SSF48498 87 208 6.82E-5 T 17-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BJD13_02400 ba2e03ed7673667512678ef3bb57b9db 226 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 153 207 3.6E-5 T 17-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type BJD13_02400 ba2e03ed7673667512678ef3bb57b9db 226 Gene3D G3DSA:1.10.357.10 8 212 1.2E-35 T 17-10-2018 BJD13_02400 ba2e03ed7673667512678ef3bb57b9db 226 ProSitePatterns PS01081 TetR-type HTH domain signature. 33 63 - T 17-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BJD13_02400 ba2e03ed7673667512678ef3bb57b9db 226 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 3.7E-10 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD13_02400 ba2e03ed7673667512678ef3bb57b9db 226 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 3.7E-10 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD13_18270 8e32947337e4ef14c3dcde6c9ebe46e1 467 SUPERFAMILY SSF51905 12 235 2.2E-18 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_18270 8e32947337e4ef14c3dcde6c9ebe46e1 467 Gene3D G3DSA:3.50.50.60 57 434 1.1E-13 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_18270 8e32947337e4ef14c3dcde6c9ebe46e1 467 Pfam PF13454 FAD-NAD(P)-binding 13 164 8.9E-33 T 17-10-2018 IPR038732 FAD-dependent urate hydroxylase HpyO, FAD/NAD(P)-binding domain BJD13_18270 8e32947337e4ef14c3dcde6c9ebe46e1 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 1.7E-5 T 17-10-2018 BJD13_18270 8e32947337e4ef14c3dcde6c9ebe46e1 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 199 217 1.7E-5 T 17-10-2018 BJD13_18270 8e32947337e4ef14c3dcde6c9ebe46e1 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 155 173 1.7E-5 T 17-10-2018 BJD13_05315 00115e871218cb1fe5a1237cab593b74 131 PIRSF PIRSF000178 1 125 2.2E-37 T 17-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BJD13_05315 00115e871218cb1fe5a1237cab593b74 131 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 5 122 3.1E-35 T 17-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BJD13_05315 00115e871218cb1fe5a1237cab593b74 131 Gene3D G3DSA:1.20.1300.10 1 125 2.7E-33 T 17-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BJD13_05315 00115e871218cb1fe5a1237cab593b74 131 SUPERFAMILY SSF81343 4 125 1.92E-30 T 17-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BJD13_05315 00115e871218cb1fe5a1237cab593b74 131 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 4 119 2.2E-21 T 17-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BJD13_20715 ad55a41bea0fa879b3ecdc3cfa243867 365 Gene3D G3DSA:3.20.20.10 10 216 3.3E-128 T 17-10-2018 IPR029066 PLP-binding barrel BJD13_20715 ad55a41bea0fa879b3ecdc3cfa243867 365 PRINTS PR00992 Alanine racemase signature 60 78 5.2E-59 T 17-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BJD13_20715 ad55a41bea0fa879b3ecdc3cfa243867 365 PRINTS PR00992 Alanine racemase signature 154 165 5.2E-59 T 17-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BJD13_20715 ad55a41bea0fa879b3ecdc3cfa243867 365 PRINTS PR00992 Alanine racemase signature 191 218 5.2E-59 T 17-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BJD13_20715 ad55a41bea0fa879b3ecdc3cfa243867 365 PRINTS PR00992 Alanine racemase signature 25 41 5.2E-59 T 17-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BJD13_20715 ad55a41bea0fa879b3ecdc3cfa243867 365 PRINTS PR00992 Alanine racemase signature 248 263 5.2E-59 T 17-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BJD13_20715 ad55a41bea0fa879b3ecdc3cfa243867 365 PRINTS PR00992 Alanine racemase signature 120 132 5.2E-59 T 17-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BJD13_20715 ad55a41bea0fa879b3ecdc3cfa243867 365 PRINTS PR00992 Alanine racemase signature 265 280 5.2E-59 T 17-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BJD13_20715 ad55a41bea0fa879b3ecdc3cfa243867 365 PRINTS PR00992 Alanine racemase signature 286 303 5.2E-59 T 17-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BJD13_20715 ad55a41bea0fa879b3ecdc3cfa243867 365 Hamap MF_01201 Alanine racemase. 1 355 34.768 T 17-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BJD13_20715 ad55a41bea0fa879b3ecdc3cfa243867 365 SUPERFAMILY SSF51419 8 233 4.06E-70 T 17-10-2018 IPR029066 PLP-binding barrel BJD13_20715 ad55a41bea0fa879b3ecdc3cfa243867 365 Pfam PF00842 Alanine racemase, C-terminal domain 232 354 7.5E-40 T 17-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BJD13_20715 ad55a41bea0fa879b3ecdc3cfa243867 365 TIGRFAM TIGR00492 alr: alanine racemase 2 355 2.5E-108 T 17-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BJD13_20715 ad55a41bea0fa879b3ecdc3cfa243867 365 SUPERFAMILY SSF50621 226 358 2.02E-45 T 17-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 BJD13_20715 ad55a41bea0fa879b3ecdc3cfa243867 365 Pfam PF01168 Alanine racemase, N-terminal domain 8 218 3.9E-66 T 17-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BJD13_20715 ad55a41bea0fa879b3ecdc3cfa243867 365 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 30 40 - T 17-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BJD13_20715 ad55a41bea0fa879b3ecdc3cfa243867 365 SMART SM01005 232 355 8.6E-65 T 17-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BJD13_20715 ad55a41bea0fa879b3ecdc3cfa243867 365 Gene3D G3DSA:2.40.37.10 8 353 3.3E-128 T 17-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 BJD13_11845 dce1ceb153ae5475cd7f23ec1c529ee5 175 SUPERFAMILY SSF56053 2 80 8.87E-19 T 17-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_11845 dce1ceb153ae5475cd7f23ec1c529ee5 175 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 174 36.269 T 17-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 BJD13_11845 dce1ceb153ae5475cd7f23ec1c529ee5 175 PIRSF PIRSF002162 1 175 4.1E-41 T 17-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_11845 dce1ceb153ae5475cd7f23ec1c529ee5 175 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 174 2.3E-68 T 17-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 BJD13_11845 dce1ceb153ae5475cd7f23ec1c529ee5 175 PRINTS PR00059 Ribosomal protein L6 signature 139 160 3.5E-33 T 17-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 BJD13_11845 dce1ceb153ae5475cd7f23ec1c529ee5 175 PRINTS PR00059 Ribosomal protein L6 signature 69 94 3.5E-33 T 17-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 BJD13_11845 dce1ceb153ae5475cd7f23ec1c529ee5 175 PRINTS PR00059 Ribosomal protein L6 signature 97 113 3.5E-33 T 17-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 BJD13_11845 dce1ceb153ae5475cd7f23ec1c529ee5 175 Gene3D G3DSA:3.90.930.12 81 175 7.1E-38 T 17-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_11845 dce1ceb153ae5475cd7f23ec1c529ee5 175 Pfam PF00347 Ribosomal protein L6 12 80 5.4E-16 T 17-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_11845 dce1ceb153ae5475cd7f23ec1c529ee5 175 Pfam PF00347 Ribosomal protein L6 88 162 1.1E-19 T 17-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_11845 dce1ceb153ae5475cd7f23ec1c529ee5 175 Gene3D G3DSA:3.90.930.12 1 80 2.9E-23 T 17-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_11845 dce1ceb153ae5475cd7f23ec1c529ee5 175 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 152 160 - T 17-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_11845 dce1ceb153ae5475cd7f23ec1c529ee5 175 SUPERFAMILY SSF56053 81 174 5.18E-35 T 17-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_22255 75eb002236810e45e0812fd4e5f88e8f 320 Gene3D G3DSA:1.10.8.300 203 317 3.1E-34 T 17-10-2018 BJD13_22255 75eb002236810e45e0812fd4e5f88e8f 320 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 35 165 9.1E-63 T 17-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 BJD13_22255 75eb002236810e45e0812fd4e5f88e8f 320 PIRSF PIRSF002849 1 320 2.4E-125 T 17-10-2018 BJD13_22255 75eb002236810e45e0812fd4e5f88e8f 320 Gene3D G3DSA:3.40.50.300 1 202 5.8E-49 T 17-10-2018 BJD13_22255 75eb002236810e45e0812fd4e5f88e8f 320 SUPERFAMILY SSF52540 5 292 2.67E-47 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_22255 75eb002236810e45e0812fd4e5f88e8f 320 SMART SM00382 32 173 0.0062 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_18685 f2ae49b0e35021cccc46d51f4c67415a 902 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 152 289 5.4E-48 T 17-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain BJD13_18685 f2ae49b0e35021cccc46d51f4c67415a 902 Gene3D G3DSA:3.40.630.30 733 896 1.8E-39 T 17-10-2018 BJD13_18685 f2ae49b0e35021cccc46d51f4c67415a 902 Gene3D G3DSA:3.30.1490.20 508 588 1.2E-66 T 17-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BJD13_18685 f2ae49b0e35021cccc46d51f4c67415a 902 Gene3D G3DSA:3.40.50.720 4 130 4.2E-31 T 17-10-2018 BJD13_18685 f2ae49b0e35021cccc46d51f4c67415a 902 SUPERFAMILY SSF56059 492 706 5.44E-30 T 17-10-2018 BJD13_18685 f2ae49b0e35021cccc46d51f4c67415a 902 Gene3D G3DSA:3.40.50.261 131 290 4.2E-50 T 17-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BJD13_18685 f2ae49b0e35021cccc46d51f4c67415a 902 SUPERFAMILY SSF52210 132 291 2.09E-36 T 17-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BJD13_18685 f2ae49b0e35021cccc46d51f4c67415a 902 SUPERFAMILY SSF51735 1 139 2.78E-29 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_18685 f2ae49b0e35021cccc46d51f4c67415a 902 Gene3D G3DSA:3.30.470.20 490 704 1.2E-66 T 17-10-2018 BJD13_18685 f2ae49b0e35021cccc46d51f4c67415a 902 Pfam PF13549 ATP-grasp domain 482 706 8.3E-75 T 17-10-2018 BJD13_18685 f2ae49b0e35021cccc46d51f4c67415a 902 Pfam PF13302 Acetyltransferase (GNAT) domain 743 877 4.1E-9 T 17-10-2018 IPR000182 GNAT domain BJD13_18685 f2ae49b0e35021cccc46d51f4c67415a 902 Pfam PF13380 CoA binding domain 14 135 5.2E-19 T 17-10-2018 IPR003781 CoA-binding GO:0048037 BJD13_18685 f2ae49b0e35021cccc46d51f4c67415a 902 SUPERFAMILY SSF52210 297 453 2.09E-38 T 17-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BJD13_18685 f2ae49b0e35021cccc46d51f4c67415a 902 SMART SM00881 9 104 2.4E-18 T 17-10-2018 IPR003781 CoA-binding GO:0048037 BJD13_18685 f2ae49b0e35021cccc46d51f4c67415a 902 Gene3D G3DSA:3.40.50.261 296 462 6.8E-47 T 17-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BJD13_18685 f2ae49b0e35021cccc46d51f4c67415a 902 SUPERFAMILY SSF55729 743 879 4.12E-20 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD13_16950 8983d99603651c8958bf1a0f38c04d23 223 SUPERFAMILY SSF74653 144 220 8.24E-22 T 17-10-2018 BJD13_16950 8983d99603651c8958bf1a0f38c04d23 223 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 145 222 1.3E-22 T 17-10-2018 IPR037682 TonB, C-terminal GO:0055085 BJD13_16950 8983d99603651c8958bf1a0f38c04d23 223 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 146 223 1.5E-25 T 17-10-2018 IPR006260 TonB/TolA, C-terminal BJD13_16950 8983d99603651c8958bf1a0f38c04d23 223 Gene3D G3DSA:3.30.1150.10 129 223 1.2E-25 T 17-10-2018 BJD13_16950 8983d99603651c8958bf1a0f38c04d23 223 PRINTS PR01217 Proline rich extensin signature 84 101 4.2E-10 T 17-10-2018 BJD13_16950 8983d99603651c8958bf1a0f38c04d23 223 PRINTS PR01217 Proline rich extensin signature 104 129 4.2E-10 T 17-10-2018 BJD13_16950 8983d99603651c8958bf1a0f38c04d23 223 PRINTS PR01217 Proline rich extensin signature 46 67 4.2E-10 T 17-10-2018 BJD13_16950 8983d99603651c8958bf1a0f38c04d23 223 PRINTS PR01217 Proline rich extensin signature 67 83 4.2E-10 T 17-10-2018 BJD13_08835 f10b29b6c1d020757e29e0c2edad4351 401 SUPERFAMILY SSF48208 12 398 6.05E-122 T 17-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 BJD13_08835 f10b29b6c1d020757e29e0c2edad4351 401 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 39 389 5.4E-125 T 17-10-2018 BJD13_08835 f10b29b6c1d020757e29e0c2edad4351 401 Gene3D G3DSA:1.50.10.10 9 400 1.4E-164 T 17-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 BJD13_11995 3568b3c514d4996b8e9b06f13ee07783 135 Hamap MF_00422 Protein translocase subunit SecE [secE]. 76 131 12.419 T 17-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BJD13_11995 3568b3c514d4996b8e9b06f13ee07783 135 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 81 109 - T 17-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BJD13_11995 3568b3c514d4996b8e9b06f13ee07783 135 Gene3D G3DSA:1.20.5.1030 76 132 2.7E-18 T 17-10-2018 IPR038379 SecE superfamily BJD13_11995 3568b3c514d4996b8e9b06f13ee07783 135 PRINTS PR01650 Bacterial translocase SecE signature 99 119 4.1E-15 T 17-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 BJD13_11995 3568b3c514d4996b8e9b06f13ee07783 135 PRINTS PR01650 Bacterial translocase SecE signature 75 95 4.1E-15 T 17-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 BJD13_11995 3568b3c514d4996b8e9b06f13ee07783 135 PRINTS PR01650 Bacterial translocase SecE signature 54 75 4.1E-15 T 17-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 BJD13_11995 3568b3c514d4996b8e9b06f13ee07783 135 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 80 133 6.0E-21 T 17-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 BJD13_11995 3568b3c514d4996b8e9b06f13ee07783 135 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 80 132 2.2E-19 T 17-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BJD13_13495 f716bcb65b1ffe45abb9af03d287a739 253 Gene3D G3DSA:3.40.50.150 33 253 1.5E-73 T 17-10-2018 BJD13_13495 f716bcb65b1ffe45abb9af03d287a739 253 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 27 252 7.0E-81 T 17-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 BJD13_13495 f716bcb65b1ffe45abb9af03d287a739 253 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 18 252 37.805 T 17-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 BJD13_13495 f716bcb65b1ffe45abb9af03d287a739 253 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 38 53 - T 17-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 BJD13_13495 f716bcb65b1ffe45abb9af03d287a739 253 SUPERFAMILY SSF53335 22 249 8.83E-44 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_13495 f716bcb65b1ffe45abb9af03d287a739 253 Pfam PF01209 ubiE/COQ5 methyltransferase family 23 252 1.0E-89 T 17-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 BJD13_13495 f716bcb65b1ffe45abb9af03d287a739 253 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 160 174 - T 17-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 BJD13_16715 eed6e3ff4a57d67b2a57490963e27686 831 Pfam PF09369 Domain of unknown function (DUF1998) 677 782 4.2E-11 T 17-10-2018 IPR018973 DEAD/DEAH-box helicase, putative BJD13_16715 eed6e3ff4a57d67b2a57490963e27686 831 Gene3D G3DSA:3.40.50.300 293 441 2.3E-24 T 17-10-2018 BJD13_16715 eed6e3ff4a57d67b2a57490963e27686 831 SUPERFAMILY SSF52540 91 419 9.63E-47 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_16715 eed6e3ff4a57d67b2a57490963e27686 831 Pfam PF00271 Helicase conserved C-terminal domain 308 412 5.0E-15 T 17-10-2018 IPR001650 Helicase, C-terminal BJD13_16715 eed6e3ff4a57d67b2a57490963e27686 831 Pfam PF00270 DEAD/DEAH box helicase 81 249 1.1E-26 T 17-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BJD13_16715 eed6e3ff4a57d67b2a57490963e27686 831 SMART SM00490 325 413 9.1E-17 T 17-10-2018 IPR001650 Helicase, C-terminal BJD13_16715 eed6e3ff4a57d67b2a57490963e27686 831 SMART SM00487 75 279 1.7E-29 T 17-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BJD13_16715 eed6e3ff4a57d67b2a57490963e27686 831 Gene3D G3DSA:3.40.50.300 60 268 1.2E-43 T 17-10-2018 BJD13_06295 2336b5d66c54f7145f7537889b0f5b63 322 Gene3D G3DSA:3.50.50.60 123 249 1.2E-122 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_06295 2336b5d66c54f7145f7537889b0f5b63 322 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 13 318 7.2E-117 T 17-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 BJD13_06295 2336b5d66c54f7145f7537889b0f5b63 322 SUPERFAMILY SSF51905 5 318 3.98E-54 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_06295 2336b5d66c54f7145f7537889b0f5b63 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 13 35 9.2E-74 T 17-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BJD13_06295 2336b5d66c54f7145f7537889b0f5b63 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 134 146 9.2E-74 T 17-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BJD13_06295 2336b5d66c54f7145f7537889b0f5b63 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 112 120 9.2E-74 T 17-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BJD13_06295 2336b5d66c54f7145f7537889b0f5b63 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 149 173 9.2E-74 T 17-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BJD13_06295 2336b5d66c54f7145f7537889b0f5b63 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 204 220 9.2E-74 T 17-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BJD13_06295 2336b5d66c54f7145f7537889b0f5b63 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 281 299 9.2E-74 T 17-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BJD13_06295 2336b5d66c54f7145f7537889b0f5b63 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 243 264 9.2E-74 T 17-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BJD13_06295 2336b5d66c54f7145f7537889b0f5b63 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 46 61 9.2E-74 T 17-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BJD13_06295 2336b5d66c54f7145f7537889b0f5b63 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 67 77 9.2E-74 T 17-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BJD13_06295 2336b5d66c54f7145f7537889b0f5b63 322 Gene3D G3DSA:3.50.50.60 15 317 1.2E-122 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_06295 2336b5d66c54f7145f7537889b0f5b63 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 14 33 1.6E-37 T 17-10-2018 BJD13_06295 2336b5d66c54f7145f7537889b0f5b63 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 271 293 1.6E-37 T 17-10-2018 BJD13_06295 2336b5d66c54f7145f7537889b0f5b63 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 1.6E-37 T 17-10-2018 BJD13_06295 2336b5d66c54f7145f7537889b0f5b63 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 1.6E-37 T 17-10-2018 BJD13_06295 2336b5d66c54f7145f7537889b0f5b63 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 241 257 1.6E-37 T 17-10-2018 BJD13_06295 2336b5d66c54f7145f7537889b0f5b63 322 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 13 302 4.4E-47 T 17-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BJD13_06295 2336b5d66c54f7145f7537889b0f5b63 322 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 141 161 - T 17-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 BJD13_15575 4157f71680cdd615af01dbe18cab7d93 833 SUPERFAMILY SSF52540 19 341 2.36E-50 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_15575 4157f71680cdd615af01dbe18cab7d93 833 Pfam PF08482 ATP-dependent helicase C-terminal 682 819 3.5E-51 T 17-10-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal BJD13_15575 4157f71680cdd615af01dbe18cab7d93 833 PIRSF PIRSF005496 1 833 0.0 T 17-10-2018 BJD13_15575 4157f71680cdd615af01dbe18cab7d93 833 Gene3D G3DSA:1.20.120.1080 370 457 1.6E-9 T 17-10-2018 BJD13_15575 4157f71680cdd615af01dbe18cab7d93 833 Pfam PF00271 Helicase conserved C-terminal domain 210 329 7.7E-16 T 17-10-2018 IPR001650 Helicase, C-terminal BJD13_15575 4157f71680cdd615af01dbe18cab7d93 833 Gene3D G3DSA:3.40.50.300 182 346 3.1E-53 T 17-10-2018 BJD13_15575 4157f71680cdd615af01dbe18cab7d93 833 Pfam PF04408 Helicase associated domain (HA2) 386 451 3.6E-16 T 17-10-2018 IPR007502 Helicase-associated domain GO:0004386 BJD13_15575 4157f71680cdd615af01dbe18cab7d93 833 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 6 832 0.0 T 17-10-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 BJD13_15575 4157f71680cdd615af01dbe18cab7d93 833 Gene3D G3DSA:3.40.50.300 2 181 5.2E-51 T 17-10-2018 BJD13_15575 4157f71680cdd615af01dbe18cab7d93 833 SMART SM00487 4 188 2.3E-13 T 17-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BJD13_15575 4157f71680cdd615af01dbe18cab7d93 833 SMART SM00847 385 481 6.7E-11 T 17-10-2018 IPR007502 Helicase-associated domain GO:0004386 BJD13_15575 4157f71680cdd615af01dbe18cab7d93 833 SMART SM00490 225 330 2.3E-15 T 17-10-2018 IPR001650 Helicase, C-terminal BJD13_20295 de082342ed6a30d963adef0042ead02c 492 Pfam PF01740 STAS domain 396 479 4.1E-8 T 17-10-2018 IPR002645 STAS domain BJD13_20295 de082342ed6a30d963adef0042ead02c 492 Pfam PF00916 Sulfate permease family 16 145 1.5E-25 T 17-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 BJD13_20295 de082342ed6a30d963adef0042ead02c 492 Pfam PF00916 Sulfate permease family 160 352 7.7E-30 T 17-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 BJD13_20295 de082342ed6a30d963adef0042ead02c 492 SUPERFAMILY SSF52091 397 481 7.06E-12 T 17-10-2018 IPR036513 STAS domain superfamily BJD13_20295 de082342ed6a30d963adef0042ead02c 492 Gene3D G3DSA:3.30.750.24 388 482 9.1E-27 T 17-10-2018 IPR036513 STAS domain superfamily BJD13_12035 f00901fb00477efd96e06d7638f8d135 211 Pfam PF01386 Ribosomal L25p family 7 94 2.9E-26 T 17-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 BJD13_12035 f00901fb00477efd96e06d7638f8d135 211 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 8 173 1.5E-38 T 17-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 BJD13_12035 f00901fb00477efd96e06d7638f8d135 211 Gene3D G3DSA:2.40.240.10 2 97 3.3E-32 T 17-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BJD13_12035 f00901fb00477efd96e06d7638f8d135 211 SUPERFAMILY SSF50715 4 197 3.49E-55 T 17-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BJD13_12035 f00901fb00477efd96e06d7638f8d135 211 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 5 188 29.732 T 17-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 BJD13_12035 f00901fb00477efd96e06d7638f8d135 211 Gene3D G3DSA:2.170.120.20 99 197 2.2E-24 T 17-10-2018 IPR037121 Ribosomal protein L25, C-terminal BJD13_12035 f00901fb00477efd96e06d7638f8d135 211 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 103 189 5.6E-24 T 17-10-2018 IPR020057 Ribosomal protein L25, beta domain BJD13_12035 f00901fb00477efd96e06d7638f8d135 211 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 6 97 5.0E-48 T 17-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 BJD13_12035 f00901fb00477efd96e06d7638f8d135 211 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 5 97 22.969 T 17-10-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 BJD13_08675 b6592ec3bfdd66f45fa808b0598188cd 290 SUPERFAMILY SSF52821 5 155 4.19E-39 T 17-10-2018 IPR036873 Rhodanese-like domain superfamily BJD13_08675 b6592ec3bfdd66f45fa808b0598188cd 290 SMART SM00450 11 141 4.0E-19 T 17-10-2018 IPR001763 Rhodanese-like domain BJD13_08675 b6592ec3bfdd66f45fa808b0598188cd 290 SMART SM00450 165 284 5.9E-10 T 17-10-2018 IPR001763 Rhodanese-like domain BJD13_08675 b6592ec3bfdd66f45fa808b0598188cd 290 Gene3D G3DSA:3.40.250.10 159 290 2.9E-29 T 17-10-2018 IPR036873 Rhodanese-like domain superfamily BJD13_08675 b6592ec3bfdd66f45fa808b0598188cd 290 Pfam PF00581 Rhodanese-like domain 167 280 2.7E-7 T 17-10-2018 IPR001763 Rhodanese-like domain BJD13_08675 b6592ec3bfdd66f45fa808b0598188cd 290 Pfam PF00581 Rhodanese-like domain 14 137 4.9E-17 T 17-10-2018 IPR001763 Rhodanese-like domain BJD13_08675 b6592ec3bfdd66f45fa808b0598188cd 290 Gene3D G3DSA:3.40.250.10 3 156 1.1E-43 T 17-10-2018 IPR036873 Rhodanese-like domain superfamily BJD13_08675 b6592ec3bfdd66f45fa808b0598188cd 290 SUPERFAMILY SSF52821 159 289 1.31E-29 T 17-10-2018 IPR036873 Rhodanese-like domain superfamily BJD13_02925 1ceeb4dbfb0f58b73767b280e99bd9b0 283 Hamap MF_02040 Iron-sulfur cluster carrier protein. 17 269 37.566 T 17-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein BJD13_02925 1ceeb4dbfb0f58b73767b280e99bd9b0 283 Gene3D G3DSA:3.40.50.300 16 278 3.1E-83 T 17-10-2018 BJD13_02925 1ceeb4dbfb0f58b73767b280e99bd9b0 283 SUPERFAMILY SSF52540 24 269 4.31E-62 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_02925 1ceeb4dbfb0f58b73767b280e99bd9b0 283 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 22 264 2.1E-101 T 17-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 BJD13_02925 1ceeb4dbfb0f58b73767b280e99bd9b0 283 ProSitePatterns PS01215 Mrp family signature. 128 144 - T 17-10-2018 IPR000808 Mrp, conserved site GO:0005524 BJD13_04705 9970290c1d22950e26965ae5d7231ed1 408 SUPERFAMILY SSF103473 3 385 1.44E-41 T 17-10-2018 IPR036259 MFS transporter superfamily BJD13_04705 9970290c1d22950e26965ae5d7231ed1 408 Gene3D G3DSA:1.20.1250.20 4 388 3.4E-30 T 17-10-2018 BJD13_04705 9970290c1d22950e26965ae5d7231ed1 408 Pfam PF07690 Major Facilitator Superfamily 12 344 1.1E-16 T 17-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD13_05285 e7996ea300b1bd2a1dfb9f58c2fa3b18 239 Gene3D G3DSA:3.40.50.1360 10 239 1.8E-54 T 17-10-2018 BJD13_05285 e7996ea300b1bd2a1dfb9f58c2fa3b18 239 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 16 226 3.9E-45 T 17-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 BJD13_05285 e7996ea300b1bd2a1dfb9f58c2fa3b18 239 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 15 228 4.0E-39 T 17-10-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 BJD13_05285 e7996ea300b1bd2a1dfb9f58c2fa3b18 239 SUPERFAMILY SSF100950 11 230 6.28E-45 T 17-10-2018 IPR037171 NagB/RpiA transferase-like BJD13_08435 08557789647bea55afbedaf3adf72ed2 354 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 43 341 3.1E-111 T 17-10-2018 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 BJD13_08435 08557789647bea55afbedaf3adf72ed2 354 Gene3D G3DSA:1.20.120.420 11 153 2.4E-40 T 17-10-2018 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 BJD13_08435 08557789647bea55afbedaf3adf72ed2 354 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 14 352 38.932 T 17-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 BJD13_08435 08557789647bea55afbedaf3adf72ed2 354 SUPERFAMILY SSF100950 12 347 4.69E-114 T 17-10-2018 IPR037171 NagB/RpiA transferase-like BJD13_08435 08557789647bea55afbedaf3adf72ed2 354 Pfam PF01008 Initiation factor 2 subunit family 57 341 2.5E-75 T 17-10-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 BJD13_08435 08557789647bea55afbedaf3adf72ed2 354 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 17 341 1.8E-136 T 17-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 BJD13_08435 08557789647bea55afbedaf3adf72ed2 354 Gene3D G3DSA:3.40.50.10470 154 351 1.1E-64 T 17-10-2018 BJD13_20160 5c162daaf26d367c09a9159247b9c307 181 Pfam PF09684 Phage tail protein (Tail_P2_I) 6 147 6.6E-47 T 17-10-2018 IPR006521 Tail protein I BJD13_20160 5c162daaf26d367c09a9159247b9c307 181 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 6 144 5.6E-69 T 17-10-2018 IPR006521 Tail protein I BJD13_10250 deef33048cc21297027e6db31d2f4d90 121 Pfam PF07237 Protein of unknown function (DUF1428) 2 103 3.5E-46 T 17-10-2018 IPR009874 Protein of unknown function DUF1428 BJD13_10250 deef33048cc21297027e6db31d2f4d90 121 PIRSF PIRSF007028 1 117 2.3E-55 T 17-10-2018 IPR009874 Protein of unknown function DUF1428 BJD13_10250 deef33048cc21297027e6db31d2f4d90 121 Gene3D G3DSA:3.30.70.100 1 116 1.2E-46 T 17-10-2018 BJD13_10250 deef33048cc21297027e6db31d2f4d90 121 SUPERFAMILY SSF54909 1 115 1.5E-51 T 17-10-2018 IPR011008 Dimeric alpha-beta barrel BJD13_16250 a769547f40b89cf2758f21437b0270f9 173 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 37 165 2.5E-22 T 17-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ BJD13_18450 e7fb20fa3886ad1c058b45aae799ef08 425 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 46 254 2.6E-73 T 17-10-2018 IPR017732 Type IV / VI secretion system, DotU BJD13_18450 e7fb20fa3886ad1c058b45aae799ef08 425 Gene3D G3DSA:1.25.40.590 44 201 5.9E-53 T 17-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily BJD13_18450 e7fb20fa3886ad1c058b45aae799ef08 425 SUPERFAMILY SSF103088 305 422 9.16E-24 T 17-10-2018 IPR036737 OmpA-like domain superfamily BJD13_18450 e7fb20fa3886ad1c058b45aae799ef08 425 TIGRFAM TIGR03350 type_VI_ompA: type VI secretion system peptidoglycan-associated domain 283 420 6.6E-43 T 17-10-2018 IPR017733 Type VI secretion system peptidoglycan-associated domain BJD13_18450 e7fb20fa3886ad1c058b45aae799ef08 425 Pfam PF09850 Type VI secretion system protein DotU 47 247 1.3E-67 T 17-10-2018 IPR017732 Type IV / VI secretion system, DotU BJD13_18450 e7fb20fa3886ad1c058b45aae799ef08 425 Gene3D G3DSA:3.30.1330.60 280 424 7.4E-35 T 17-10-2018 IPR036737 OmpA-like domain superfamily BJD13_18450 e7fb20fa3886ad1c058b45aae799ef08 425 Pfam PF00691 OmpA family 316 414 4.8E-12 T 17-10-2018 IPR006665 OmpA-like domain BJD13_17735 9f0a1140a7384a613072da8bc247976c 482 Gene3D G3DSA:3.40.640.10 112 366 3.4E-116 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD13_17735 9f0a1140a7384a613072da8bc247976c 482 Pfam PF00202 Aminotransferase class-III 75 404 3.6E-50 T 17-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BJD13_17735 9f0a1140a7384a613072da8bc247976c 482 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 278 314 - T 17-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BJD13_17735 9f0a1140a7384a613072da8bc247976c 482 SUPERFAMILY SSF53383 49 479 1.79E-88 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD13_17735 9f0a1140a7384a613072da8bc247976c 482 Gene3D G3DSA:3.90.1150.10 55 476 3.4E-116 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD13_02645 72e49ca4f10668f3d3adbd0b38e56577 118 SUPERFAMILY SSF51316 1 113 5.02E-21 T 17-10-2018 IPR011057 Mss4-like superfamily BJD13_02645 72e49ca4f10668f3d3adbd0b38e56577 118 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 26 93 9.8E-7 T 17-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 BJD13_02645 72e49ca4f10668f3d3adbd0b38e56577 118 Gene3D G3DSA:2.170.150.70 4 118 2.0E-27 T 17-10-2018 BJD13_12925 74624d4d1ef91afac3a9d5087bf848ad 238 Pfam PF00072 Response regulator receiver domain 13 122 2.0E-28 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_12925 74624d4d1ef91afac3a9d5087bf848ad 238 Gene3D G3DSA:1.10.10.10 133 235 2.6E-28 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_12925 74624d4d1ef91afac3a9d5087bf848ad 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 5.7E-21 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD13_12925 74624d4d1ef91afac3a9d5087bf848ad 238 Gene3D G3DSA:3.40.50.2300 5 132 9.5E-36 T 17-10-2018 BJD13_12925 74624d4d1ef91afac3a9d5087bf848ad 238 SMART SM00862 157 233 1.6E-22 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD13_12925 74624d4d1ef91afac3a9d5087bf848ad 238 SUPERFAMILY SSF46894 133 233 2.07E-23 T 17-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BJD13_12925 74624d4d1ef91afac3a9d5087bf848ad 238 SMART SM00448 11 121 4.0E-41 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_12925 74624d4d1ef91afac3a9d5087bf848ad 238 SUPERFAMILY SSF52172 5 129 8.68E-40 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_09975 655412521f4f274ed41cbe2c9485a18b 240 Gene3D G3DSA:2.40.50.140 3 79 2.7E-25 T 17-10-2018 BJD13_09975 655412521f4f274ed41cbe2c9485a18b 240 Hamap MF_00201 DNA repair protein RecO [recO]. 2 236 19.524 T 17-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 BJD13_09975 655412521f4f274ed41cbe2c9485a18b 240 Pfam PF11967 Recombination protein O N terminal 3 78 1.6E-20 T 17-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal BJD13_09975 655412521f4f274ed41cbe2c9485a18b 240 SUPERFAMILY SSF50249 3 78 7.54E-12 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD13_09975 655412521f4f274ed41cbe2c9485a18b 240 SUPERFAMILY SSF57863 87 155 4.97E-6 T 17-10-2018 IPR037278 ARFGAP/RecO-like zinc finger BJD13_09975 655412521f4f274ed41cbe2c9485a18b 240 Pfam PF02565 Recombination protein O C terminal 85 230 6.7E-16 T 17-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 BJD13_09975 655412521f4f274ed41cbe2c9485a18b 240 TIGRFAM TIGR00613 reco: DNA repair protein RecO 7 154 2.5E-21 T 17-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 BJD13_09975 655412521f4f274ed41cbe2c9485a18b 240 Gene3D G3DSA:1.20.1440.120 82 240 8.9E-38 T 17-10-2018 BJD13_20375 893553dfef99baaa9206bde7cdf53479 422 Pfam PF12040 Domain of unknown function (DUF3526) 274 416 1.3E-32 T 17-10-2018 IPR021913 Protein of unknown function DUF3526 BJD13_06265 f97ab2428061b3151ae9ad089e6d5b8a 457 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 62 170 6.2E-14 T 17-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BJD13_06265 f97ab2428061b3151ae9ad089e6d5b8a 457 Pfam PF12002 MgsA AAA+ ATPase C terminal 275 440 1.4E-62 T 17-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal BJD13_06265 f97ab2428061b3151ae9ad089e6d5b8a 457 Gene3D G3DSA:3.40.50.300 15 172 2.3E-43 T 17-10-2018 BJD13_06265 f97ab2428061b3151ae9ad089e6d5b8a 457 SUPERFAMILY SSF48019 258 440 3.61E-69 T 17-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 BJD13_06265 f97ab2428061b3151ae9ad089e6d5b8a 457 Gene3D G3DSA:1.10.8.60 174 248 2.3E-16 T 17-10-2018 BJD13_06265 f97ab2428061b3151ae9ad089e6d5b8a 457 Gene3D G3DSA:1.10.3710.10 352 452 4.2E-32 T 17-10-2018 BJD13_06265 f97ab2428061b3151ae9ad089e6d5b8a 457 Gene3D G3DSA:1.20.272.10 249 351 1.7E-40 T 17-10-2018 BJD13_06265 f97ab2428061b3151ae9ad089e6d5b8a 457 SUPERFAMILY SSF52540 22 242 3.8E-46 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_06265 f97ab2428061b3151ae9ad089e6d5b8a 457 SMART SM00382 58 174 1.7E-13 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_06265 f97ab2428061b3151ae9ad089e6d5b8a 457 Pfam PF16193 AAA C-terminal domain 197 273 1.0E-21 T 17-10-2018 IPR032423 AAA C-terminal domain BJD13_21980 9f88f89403e8756d631c713bfcf2832d 198 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 13 197 7.2E-14 T 17-10-2018 IPR003111 Lon, substrate-binding domain BJD13_21980 9f88f89403e8756d631c713bfcf2832d 198 SMART SM00464 12 197 2.6E-4 T 17-10-2018 IPR003111 Lon, substrate-binding domain BJD13_21980 9f88f89403e8756d631c713bfcf2832d 198 Gene3D G3DSA:2.30.130.40 10 119 8.3E-32 T 17-10-2018 BJD13_21980 9f88f89403e8756d631c713bfcf2832d 198 SUPERFAMILY SSF88697 13 197 1.84E-42 T 17-10-2018 IPR015947 PUA-like superfamily BJD13_21980 9f88f89403e8756d631c713bfcf2832d 198 Gene3D G3DSA:1.10.4060.10 122 197 6.9E-7 T 17-10-2018 BJD13_22930 63853dbfc214ee4eb7d3b8ce598d92a4 204 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 179 3.9E-41 T 17-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 BJD13_22930 63853dbfc214ee4eb7d3b8ce598d92a4 204 SUPERFAMILY SSF53254 3 181 3.21E-43 T 17-10-2018 IPR029033 Histidine phosphatase superfamily BJD13_22930 63853dbfc214ee4eb7d3b8ce598d92a4 204 Gene3D G3DSA:3.40.50.1240 2 185 2.4E-41 T 17-10-2018 IPR029033 Histidine phosphatase superfamily BJD13_22930 63853dbfc214ee4eb7d3b8ce598d92a4 204 PIRSF PIRSF000709 2 185 0.0037 T 17-10-2018 BJD13_22930 63853dbfc214ee4eb7d3b8ce598d92a4 204 SMART SM00855 4 152 3.8E-11 T 17-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 BJD13_14750 fa8142b16e0b196d747f8823c80c6b6f 869 SMART SM00642 7 533 2.5E-6 T 17-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BJD13_14750 fa8142b16e0b196d747f8823c80c6b6f 869 Gene3D G3DSA:3.20.20.80 202 391 1.3E-33 T 17-10-2018 BJD13_14750 fa8142b16e0b196d747f8823c80c6b6f 869 Gene3D G3DSA:3.20.20.80 631 770 2.3E-37 T 17-10-2018 BJD13_14750 fa8142b16e0b196d747f8823c80c6b6f 869 Gene3D G3DSA:3.20.20.80 3 124 7.2E-27 T 17-10-2018 BJD13_14750 fa8142b16e0b196d747f8823c80c6b6f 869 Gene3D G3DSA:3.20.20.80 470 586 2.5E-5 T 17-10-2018 BJD13_14750 fa8142b16e0b196d747f8823c80c6b6f 869 TIGRFAM TIGR02401 trehalose_TreY: malto-oligosyltrehalose synthase 5 865 0.0 T 17-10-2018 IPR012767 Maltooligosyl trehalose synthase KEGG: 00500+5.4.99.15|MetaCyc: PWY-2661 BJD13_14750 fa8142b16e0b196d747f8823c80c6b6f 869 Pfam PF00128 Alpha amylase, catalytic domain 24 108 1.8E-14 T 17-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BJD13_14750 fa8142b16e0b196d747f8823c80c6b6f 869 SUPERFAMILY SSF51445 5 766 9.15E-126 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily BJD13_13200 1e3ee8465bc9cfff92a6cc5797e9e34d 154 SUPERFAMILY SSF54523 11 121 9.42E-10 T 17-10-2018 BJD13_13200 1e3ee8465bc9cfff92a6cc5797e9e34d 154 Gene3D G3DSA:3.55.40.10 38 116 1.2E-8 T 17-10-2018 BJD13_13200 1e3ee8465bc9cfff92a6cc5797e9e34d 154 Pfam PF12019 Type II transport protein GspH 45 145 6.5E-9 T 17-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 BJD13_13200 1e3ee8465bc9cfff92a6cc5797e9e34d 154 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 30 1.6E-6 T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD13_13200 1e3ee8465bc9cfff92a6cc5797e9e34d 154 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 31 1.3E-6 T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD13_13200 1e3ee8465bc9cfff92a6cc5797e9e34d 154 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD13_13200 1e3ee8465bc9cfff92a6cc5797e9e34d 154 PRINTS PR00885 Bacterial general secretion pathway protein H signature 6 20 2.2E-5 T 17-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 BJD13_13200 1e3ee8465bc9cfff92a6cc5797e9e34d 154 PRINTS PR00885 Bacterial general secretion pathway protein H signature 21 35 2.2E-5 T 17-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 BJD13_13200 1e3ee8465bc9cfff92a6cc5797e9e34d 154 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 9 149 6.0E-22 T 17-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 BJD13_12210 e55a1815ff6173f727d99ee0b09095fc 191 PIRSF PIRSF000232 1 191 6.1E-61 T 17-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like BJD13_12210 e55a1815ff6173f727d99ee0b09095fc 191 Pfam PF00881 Nitroreductase family 12 168 3.9E-20 T 17-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 BJD13_12210 e55a1815ff6173f727d99ee0b09095fc 191 SUPERFAMILY SSF55469 7 187 3.66E-30 T 17-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 BJD13_12210 e55a1815ff6173f727d99ee0b09095fc 191 Gene3D G3DSA:3.40.109.10 7 169 8.6E-34 T 17-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 BJD13_13195 e54ce53df41a4938366a9abf00b4f177 126 Pfam PF07963 Prokaryotic N-terminal methylation motif 8 33 2.4E-6 T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD13_13195 e54ce53df41a4938366a9abf00b4f177 126 SUPERFAMILY SSF54523 45 119 5.49E-15 T 17-10-2018 BJD13_13195 e54ce53df41a4938366a9abf00b4f177 126 Gene3D G3DSA:3.30.1300.30 36 122 5.0E-13 T 17-10-2018 BJD13_13195 e54ce53df41a4938366a9abf00b4f177 126 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 32 8.6E-6 T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD13_13195 e54ce53df41a4938366a9abf00b4f177 126 TIGRFAM TIGR01707 gspI: type II secretion system protein I 12 108 4.0E-21 T 17-10-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 BJD13_13195 e54ce53df41a4938366a9abf00b4f177 126 Pfam PF02501 Type II secretion system (T2SS), protein I 46 122 7.0E-16 T 17-10-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 BJD13_13195 e54ce53df41a4938366a9abf00b4f177 126 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD13_09955 61363d2d76d07384c2dcdd7dd16f0590 165 SMART SM01118 2 155 9.8E-22 T 17-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 BJD13_09955 61363d2d76d07384c2dcdd7dd16f0590 165 SUPERFAMILY SSF55154 1 155 3.92E-41 T 17-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 BJD13_09955 61363d2d76d07384c2dcdd7dd16f0590 165 PIRSF PIRSF016487 1 165 2.0E-62 T 17-10-2018 IPR012042 Inorganic triphosphatase NeuTTM/CthTTM-like BJD13_09955 61363d2d76d07384c2dcdd7dd16f0590 165 Gene3D G3DSA:2.40.320.10 1 157 2.0E-45 T 17-10-2018 BJD13_09955 61363d2d76d07384c2dcdd7dd16f0590 165 Pfam PF01928 CYTH domain 4 144 9.2E-18 T 17-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 BJD13_11975 e3e9434aeac5b7283dc4044fbdce760b 177 Pfam PF00466 Ribosomal protein L10 6 101 6.8E-23 T 17-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 BJD13_11975 e3e9434aeac5b7283dc4044fbdce760b 177 SUPERFAMILY SSF160369 4 160 4.97E-43 T 17-10-2018 BJD13_11975 e3e9434aeac5b7283dc4044fbdce760b 177 Gene3D G3DSA:3.30.70.1730 4 134 2.1E-29 T 17-10-2018 BJD13_11975 e3e9434aeac5b7283dc4044fbdce760b 177 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 161 25.124 T 17-10-2018 IPR022973 Ribosomal protein L10 BJD13_08820 52b61a5d633b2903181743ba3d4e4690 331 SMART SM00418 8 88 4.5E-19 T 17-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BJD13_08820 52b61a5d633b2903181743ba3d4e4690 331 Pfam PF01022 Bacterial regulatory protein, arsR family 15 60 6.7E-15 T 17-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BJD13_08820 52b61a5d633b2903181743ba3d4e4690 331 Gene3D G3DSA:1.10.10.10 1 85 1.2E-20 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_08820 52b61a5d633b2903181743ba3d4e4690 331 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 42 57 1.2E-11 T 17-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BJD13_08820 52b61a5d633b2903181743ba3d4e4690 331 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 57 72 1.2E-11 T 17-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BJD13_08820 52b61a5d633b2903181743ba3d4e4690 331 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 1.2E-11 T 17-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BJD13_08820 52b61a5d633b2903181743ba3d4e4690 331 SUPERFAMILY SSF53335 124 302 1.32E-36 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_08820 52b61a5d633b2903181743ba3d4e4690 331 Gene3D G3DSA:3.40.50.150 135 303 3.4E-36 T 17-10-2018 BJD13_08820 52b61a5d633b2903181743ba3d4e4690 331 Pfam PF08241 Methyltransferase domain 152 245 2.7E-24 T 17-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 BJD13_08820 52b61a5d633b2903181743ba3d4e4690 331 SUPERFAMILY SSF46785 1 82 4.4E-21 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_06195 5541ee42169e695c95ce2c9b62309264 887 Pfam PF07715 TonB-dependent Receptor Plug Domain 76 171 2.0E-12 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_06195 5541ee42169e695c95ce2c9b62309264 887 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 51 886 7.2E-214 T 17-10-2018 IPR010104 Bacterial TonB-dependent receptor BJD13_06195 5541ee42169e695c95ce2c9b62309264 887 Pfam PF00593 TonB dependent receptor 412 886 8.3E-37 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_06195 5541ee42169e695c95ce2c9b62309264 887 Gene3D G3DSA:2.170.130.10 55 174 4.8E-11 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_06195 5541ee42169e695c95ce2c9b62309264 887 SUPERFAMILY SSF56935 43 886 1.2E-81 T 17-10-2018 BJD13_01490 6ba8240fbe66f79ea8c94d94fc6557b9 335 Gene3D G3DSA:3.40.50.300 124 333 2.0E-51 T 17-10-2018 BJD13_01490 6ba8240fbe66f79ea8c94d94fc6557b9 335 Pfam PF00437 Type II/IV secretion system protein 28 293 2.0E-64 T 17-10-2018 IPR001482 Type II/IV secretion system protein BJD13_01490 6ba8240fbe66f79ea8c94d94fc6557b9 335 SUPERFAMILY SSF52540 26 311 1.35E-35 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_01490 6ba8240fbe66f79ea8c94d94fc6557b9 335 Gene3D G3DSA:3.30.450.90 21 123 1.5E-14 T 17-10-2018 BJD13_03910 835fe129e88ca6b889b4cfc0041af21f 235 Gene3D G3DSA:3.90.550.20 46 173 5.2E-11 T 17-10-2018 BJD13_03910 835fe129e88ca6b889b4cfc0041af21f 235 Pfam PF04488 Glycosyltransferase sugar-binding region containing DXD motif 29 102 1.2E-7 T 17-10-2018 IPR007577 Glycosyltransferase, DXD sugar-binding motif BJD13_03910 835fe129e88ca6b889b4cfc0041af21f 235 SUPERFAMILY SSF53448 26 191 1.54E-14 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD13_03740 30a4e09120fbc9ca205c012595cbb206 81 SUPERFAMILY SSF54292 5 80 1.31E-18 T 17-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 BJD13_03740 30a4e09120fbc9ca205c012595cbb206 81 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 80 4.0E-22 T 17-10-2018 BJD13_03740 30a4e09120fbc9ca205c012595cbb206 81 Gene3D G3DSA:3.10.20.440 1 81 2.7E-11 T 17-10-2018 BJD13_11780 1551cbf811a1b815dd834355c2b263de 707 Pfam PF07715 TonB-dependent Receptor Plug Domain 57 150 1.3E-4 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_11780 1551cbf811a1b815dd834355c2b263de 707 Pfam PF00593 TonB dependent receptor 235 704 2.2E-36 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_11780 1551cbf811a1b815dd834355c2b263de 707 SUPERFAMILY SSF56935 29 707 3.48E-79 T 17-10-2018 BJD13_11780 1551cbf811a1b815dd834355c2b263de 707 Gene3D G3DSA:2.40.170.20 157 707 9.0E-51 T 17-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BJD13_00415 5af297c37e5956081c66a4be6a9ebb7e 137 Pfam PF11412 Disulphide bond corrector protein DsbC 22 135 1.7E-17 T 17-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain BJD13_00415 5af297c37e5956081c66a4be6a9ebb7e 137 SUPERFAMILY SSF74863 22 134 1.12E-20 T 17-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily BJD13_00415 5af297c37e5956081c66a4be6a9ebb7e 137 Gene3D G3DSA:2.60.40.1250 15 137 1.9E-23 T 17-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily BJD13_12355 6dbae5c26301906d6e4c246dc602cc4b 369 SUPERFAMILY SSF51735 29 191 3.1E-45 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_12355 6dbae5c26301906d6e4c246dc602cc4b 369 SUPERFAMILY SSF55347 168 323 1.37E-21 T 17-10-2018 BJD13_12355 6dbae5c26301906d6e4c246dc602cc4b 369 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 38 162 3.8E-24 T 17-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 BJD13_12355 6dbae5c26301906d6e4c246dc602cc4b 369 Gene3D G3DSA:3.30.360.10 170 363 1.4E-83 T 17-10-2018 BJD13_12355 6dbae5c26301906d6e4c246dc602cc4b 369 Gene3D G3DSA:3.40.50.720 43 345 1.4E-83 T 17-10-2018 BJD13_12355 6dbae5c26301906d6e4c246dc602cc4b 369 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 287 302 6.4E-20 T 17-10-2018 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 BJD13_12355 6dbae5c26301906d6e4c246dc602cc4b 369 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 152 166 6.4E-20 T 17-10-2018 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 BJD13_12355 6dbae5c26301906d6e4c246dc602cc4b 369 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 335 351 6.4E-20 T 17-10-2018 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 BJD13_12355 6dbae5c26301906d6e4c246dc602cc4b 369 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 90 106 6.4E-20 T 17-10-2018 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 BJD13_12355 6dbae5c26301906d6e4c246dc602cc4b 369 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 36 49 6.4E-20 T 17-10-2018 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 BJD13_12375 719457463befb948ba14ebbf802f84ca 157 Pfam PF12802 MarR family 34 91 3.5E-9 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD13_12375 719457463befb948ba14ebbf802f84ca 157 SMART SM00347 28 127 4.8E-10 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD13_12375 719457463befb948ba14ebbf802f84ca 157 Gene3D G3DSA:1.10.10.10 1 142 5.4E-22 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_12375 719457463befb948ba14ebbf802f84ca 157 SUPERFAMILY SSF46785 5 140 2.45E-22 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_12860 7e8622a37759ec7249e13d00ec05d240 87 Pfam PF04999 Cell division protein FtsL 5 87 2.0E-24 T 17-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 BJD13_12860 7e8622a37759ec7249e13d00ec05d240 87 Hamap MF_00910 Cell division protein FtsL [ftsL]. 2 85 16.316 T 17-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 BJD13_12860 7e8622a37759ec7249e13d00ec05d240 87 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 4 85 3.0E-21 T 17-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 BJD13_19600 890114550ad2b163ad5711507114fc01 118 Pfam PF02152 Dihydroneopterin aldolase 4 113 1.0E-30 T 17-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 BJD13_19600 890114550ad2b163ad5711507114fc01 118 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 2 114 3.8E-24 T 17-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 BJD13_19600 890114550ad2b163ad5711507114fc01 118 SUPERFAMILY SSF55620 1 116 4.89E-36 T 17-10-2018 BJD13_19600 890114550ad2b163ad5711507114fc01 118 SMART SM00905 4 114 1.3E-47 T 17-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 BJD13_19600 890114550ad2b163ad5711507114fc01 118 Gene3D G3DSA:3.30.1130.10 1 117 6.9E-41 T 17-10-2018 BJD13_19600 890114550ad2b163ad5711507114fc01 118 TIGRFAM TIGR00526 folB_dom: FolB domain 1 116 1.2E-32 T 17-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 BJD13_23625 850e79a21375b4d79741f3a7423144f7 453 Pfam PF07690 Major Facilitator Superfamily 77 351 4.6E-13 T 17-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD13_23625 850e79a21375b4d79741f3a7423144f7 453 Gene3D G3DSA:1.20.1250.20 56 430 9.3E-18 T 17-10-2018 BJD13_23625 850e79a21375b4d79741f3a7423144f7 453 SUPERFAMILY SSF103473 63 442 6.19E-24 T 17-10-2018 IPR036259 MFS transporter superfamily BJD13_18955 6fdea33cb47f8f5c906f9d61182ee82d 251 SUPERFAMILY SSF55486 34 241 1.03E-32 T 17-10-2018 BJD13_18955 6fdea33cb47f8f5c906f9d61182ee82d 251 Gene3D G3DSA:1.10.472.150 13 138 4.1E-40 T 17-10-2018 BJD13_18955 6fdea33cb47f8f5c906f9d61182ee82d 251 Pfam PF06167 Glucose-regulated metallo-peptidase M90 11 240 1.1E-75 T 17-10-2018 IPR010384 MtfA family BJD13_18955 6fdea33cb47f8f5c906f9d61182ee82d 251 Gene3D G3DSA:3.40.390.10 141 251 1.1E-35 T 17-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 BJD13_16865 9633b5e33323216978d446f230c0674f 411 Pfam PF01551 Peptidase family M23 311 404 1.2E-27 T 17-10-2018 IPR016047 Peptidase M23 BJD13_16865 9633b5e33323216978d446f230c0674f 411 SUPERFAMILY SSF51261 200 408 2.82E-45 T 17-10-2018 IPR011055 Duplicated hybrid motif BJD13_16865 9633b5e33323216978d446f230c0674f 411 Gene3D G3DSA:2.70.70.10 277 410 1.2E-35 T 17-10-2018 IPR011055 Duplicated hybrid motif BJD13_03255 0dfdb1b5630f7ecee12d9157b69588c3 167 SUPERFAMILY SSF52255 9 165 1.57E-64 T 17-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 BJD13_03255 0dfdb1b5630f7ecee12d9157b69588c3 167 PIRSF PIRSF001338 5 167 7.8E-66 T 17-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 BJD13_03255 0dfdb1b5630f7ecee12d9157b69588c3 167 Pfam PF00731 AIR carboxylase 10 157 6.8E-62 T 17-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 BJD13_03255 0dfdb1b5630f7ecee12d9157b69588c3 167 SMART SM01001 8 159 1.8E-98 T 17-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 BJD13_03255 0dfdb1b5630f7ecee12d9157b69588c3 167 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 10 163 32.087 T 17-10-2018 IPR033747 Class I PurE BJD13_03255 0dfdb1b5630f7ecee12d9157b69588c3 167 Gene3D G3DSA:3.40.50.7700 1 166 1.5E-71 T 17-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 BJD13_03255 0dfdb1b5630f7ecee12d9157b69588c3 167 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 10 164 9.0E-64 T 17-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 BJD13_23795 aa5d61fd19d2f60f2407ffdc84c31511 180 Gene3D G3DSA:3.40.50.300 4 176 2.5E-53 T 17-10-2018 BJD13_23795 aa5d61fd19d2f60f2407ffdc84c31511 180 Hamap MF_00109 Shikimate kinase [aroK]. 4 170 27.53 T 17-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 BJD13_23795 aa5d61fd19d2f60f2407ffdc84c31511 180 PRINTS PR01100 Shikimate kinase family signature 7 22 3.2E-21 T 17-10-2018 BJD13_23795 aa5d61fd19d2f60f2407ffdc84c31511 180 PRINTS PR01100 Shikimate kinase family signature 31 44 3.2E-21 T 17-10-2018 BJD13_23795 aa5d61fd19d2f60f2407ffdc84c31511 180 PRINTS PR01100 Shikimate kinase family signature 59 67 3.2E-21 T 17-10-2018 BJD13_23795 aa5d61fd19d2f60f2407ffdc84c31511 180 PRINTS PR01100 Shikimate kinase family signature 77 86 3.2E-21 T 17-10-2018 BJD13_23795 aa5d61fd19d2f60f2407ffdc84c31511 180 PRINTS PR01100 Shikimate kinase family signature 98 115 3.2E-21 T 17-10-2018 BJD13_23795 aa5d61fd19d2f60f2407ffdc84c31511 180 Pfam PF01202 Shikimate kinase 13 167 1.1E-47 T 17-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 BJD13_23795 aa5d61fd19d2f60f2407ffdc84c31511 180 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 17-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 BJD13_23795 aa5d61fd19d2f60f2407ffdc84c31511 180 SUPERFAMILY SSF52540 5 165 2.42E-29 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_07565 48922ff75e2f5b64863822a8c4c18506 427 Pfam PF07690 Major Facilitator Superfamily 54 282 2.2E-18 T 17-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD13_07565 48922ff75e2f5b64863822a8c4c18506 427 SUPERFAMILY SSF103473 5 426 1.7E-55 T 17-10-2018 IPR036259 MFS transporter superfamily BJD13_07565 48922ff75e2f5b64863822a8c4c18506 427 Gene3D G3DSA:1.20.1250.20 14 422 2.3E-53 T 17-10-2018 BJD13_16150 92b2f666ced3e239b47bf24db642fdeb 393 SUPERFAMILY SSF53383 18 391 5.52E-55 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD13_16150 92b2f666ced3e239b47bf24db642fdeb 393 Gene3D G3DSA:3.40.640.10 41 305 1.8E-58 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD13_16150 92b2f666ced3e239b47bf24db642fdeb 393 Gene3D G3DSA:3.90.1150.10 29 383 1.8E-58 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD13_16150 92b2f666ced3e239b47bf24db642fdeb 393 Pfam PF00266 Aminotransferase class-V 68 365 4.8E-25 T 17-10-2018 IPR000192 Aminotransferase class V domain BJD13_05110 e8436d9e0c08761bd413bca8811434ec 274 Pfam PF00561 alpha/beta hydrolase fold 23 254 1.1E-24 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD13_05110 e8436d9e0c08761bd413bca8811434ec 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 92 105 2.1E-10 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD13_05110 e8436d9e0c08761bd413bca8811434ec 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 217 231 2.1E-10 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD13_05110 e8436d9e0c08761bd413bca8811434ec 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 48 63 2.1E-10 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD13_05110 e8436d9e0c08761bd413bca8811434ec 274 SUPERFAMILY SSF53474 4 271 4.26E-64 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_05110 e8436d9e0c08761bd413bca8811434ec 274 Gene3D G3DSA:3.40.50.1820 4 273 1.5E-81 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_01625 f2f7118f0ebf9fce0f6230d9bb8ecade 252 Pfam PF07277 SapC 7 232 3.1E-66 T 17-10-2018 IPR010836 SapC BJD13_22495 888cee8fdd13f539a10c2aa5025eff3b 615 SUPERFAMILY SSF63380 233 463 2.13E-54 T 17-10-2018 IPR017938 Riboflavin synthase-like beta-barrel BJD13_22495 888cee8fdd13f539a10c2aa5025eff3b 615 Pfam PF00258 Flavodoxin 72 195 7.5E-31 T 17-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 BJD13_22495 888cee8fdd13f539a10c2aa5025eff3b 615 Pfam PF00175 Oxidoreductase NAD-binding domain 474 579 1.0E-17 T 17-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 BJD13_22495 888cee8fdd13f539a10c2aa5025eff3b 615 Gene3D G3DSA:3.40.50.80 462 615 4.4E-52 T 17-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BJD13_22495 888cee8fdd13f539a10c2aa5025eff3b 615 PIRSF PIRSF000207 1 615 4.3E-199 T 17-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BJD13_22495 888cee8fdd13f539a10c2aa5025eff3b 615 Pfam PF00667 FAD binding domain 270 442 1.0E-16 T 17-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 BJD13_22495 888cee8fdd13f539a10c2aa5025eff3b 615 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 10 615 6.3E-252 T 17-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BJD13_22495 888cee8fdd13f539a10c2aa5025eff3b 615 PRINTS PR00369 Flavodoxin signature 151 161 3.2E-16 T 17-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BJD13_22495 888cee8fdd13f539a10c2aa5025eff3b 615 PRINTS PR00369 Flavodoxin signature 119 130 3.2E-16 T 17-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BJD13_22495 888cee8fdd13f539a10c2aa5025eff3b 615 PRINTS PR00369 Flavodoxin signature 71 84 3.2E-16 T 17-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BJD13_22495 888cee8fdd13f539a10c2aa5025eff3b 615 PRINTS PR00369 Flavodoxin signature 175 194 3.2E-16 T 17-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BJD13_22495 888cee8fdd13f539a10c2aa5025eff3b 615 SUPERFAMILY SSF52343 462 615 3.01E-47 T 17-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BJD13_22495 888cee8fdd13f539a10c2aa5025eff3b 615 Gene3D G3DSA:2.40.30.10 238 456 2.4E-58 T 17-10-2018 BJD13_22495 888cee8fdd13f539a10c2aa5025eff3b 615 Gene3D G3DSA:1.20.990.10 296 402 2.4E-58 T 17-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 BJD13_22495 888cee8fdd13f539a10c2aa5025eff3b 615 Gene3D G3DSA:3.40.50.360 61 221 5.6E-46 T 17-10-2018 IPR029039 Flavoprotein-like superfamily BJD13_22495 888cee8fdd13f539a10c2aa5025eff3b 615 SUPERFAMILY SSF52218 67 214 5.71E-44 T 17-10-2018 IPR029039 Flavoprotein-like superfamily BJD13_22495 888cee8fdd13f539a10c2aa5025eff3b 615 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 542 558 2.0E-22 T 17-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BJD13_22495 888cee8fdd13f539a10c2aa5025eff3b 615 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 511 522 2.0E-22 T 17-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BJD13_22495 888cee8fdd13f539a10c2aa5025eff3b 615 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 498 507 2.0E-22 T 17-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BJD13_22495 888cee8fdd13f539a10c2aa5025eff3b 615 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 404 411 2.0E-22 T 17-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BJD13_22495 888cee8fdd13f539a10c2aa5025eff3b 615 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 286 296 2.0E-22 T 17-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BJD13_22495 888cee8fdd13f539a10c2aa5025eff3b 615 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 473 492 2.0E-22 T 17-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BJD13_22495 888cee8fdd13f539a10c2aa5025eff3b 615 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 565 573 2.0E-22 T 17-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BJD13_10060 f06b0f660d7fd46f4ed8eb8bd057acd9 897 Gene3D G3DSA:2.170.130.10 67 191 7.9E-13 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_10060 f06b0f660d7fd46f4ed8eb8bd057acd9 897 SUPERFAMILY SSF56935 60 897 1.36E-72 T 17-10-2018 BJD13_10060 f06b0f660d7fd46f4ed8eb8bd057acd9 897 Pfam PF07715 TonB-dependent Receptor Plug Domain 84 183 1.6E-12 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_10060 f06b0f660d7fd46f4ed8eb8bd057acd9 897 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 65 897 5.9E-208 T 17-10-2018 IPR010104 Bacterial TonB-dependent receptor BJD13_10060 f06b0f660d7fd46f4ed8eb8bd057acd9 897 Pfam PF00593 TonB dependent receptor 391 896 9.2E-21 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_10060 f06b0f660d7fd46f4ed8eb8bd057acd9 897 Gene3D G3DSA:2.40.170.20 367 897 2.0E-34 T 17-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BJD13_21325 54fc6ad137d93d751d327aa05fe05aab 377 SUPERFAMILY SSF51126 27 376 6.44E-84 T 17-10-2018 IPR011050 Pectin lyase fold/virulence factor BJD13_21325 54fc6ad137d93d751d327aa05fe05aab 377 Pfam PF00544 Pectate lyase 77 308 6.0E-59 T 17-10-2018 IPR002022 Pectate lyase BJD13_21325 54fc6ad137d93d751d327aa05fe05aab 377 SMART SM00656 51 314 3.4E-65 T 17-10-2018 IPR002022 Pectate lyase BJD13_21325 54fc6ad137d93d751d327aa05fe05aab 377 Gene3D G3DSA:2.160.20.10 28 377 3.4E-120 T 17-10-2018 IPR012334 Pectin lyase fold BJD13_12295 37d23f0d347f296d1058eef84efa8794 154 Gene3D G3DSA:3.40.50.12740 8 152 1.3E-34 T 17-10-2018 BJD13_12295 37d23f0d347f296d1058eef84efa8794 154 SUPERFAMILY SSF52172 9 142 1.85E-33 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_12295 37d23f0d347f296d1058eef84efa8794 154 SMART SM00448 9 124 4.6E-30 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_12295 37d23f0d347f296d1058eef84efa8794 154 Pfam PF00072 Response regulator receiver domain 11 118 7.1E-27 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_05865 9cea16a1b006a9ce1ae09b79beb95b5a 240 SUPERFAMILY SSF81606 8 233 2.09E-49 T 17-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BJD13_05865 9cea16a1b006a9ce1ae09b79beb95b5a 240 SMART SM00332 2 231 6.9E-21 T 17-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BJD13_05865 9cea16a1b006a9ce1ae09b79beb95b5a 240 SMART SM00331 11 233 8.8E-6 T 17-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BJD13_05865 9cea16a1b006a9ce1ae09b79beb95b5a 240 Pfam PF13672 Protein phosphatase 2C 18 195 1.0E-14 T 17-10-2018 BJD13_05865 9cea16a1b006a9ce1ae09b79beb95b5a 240 Gene3D G3DSA:3.60.40.10 2 234 1.2E-49 T 17-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BJD13_22165 01ecf663d5425f56feecdbaa2c2e8874 130 Gene3D G3DSA:3.10.180.10 1 130 3.8E-32 T 17-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD13_22165 01ecf663d5425f56feecdbaa2c2e8874 130 SUPERFAMILY SSF54593 3 128 5.77E-26 T 17-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD13_22165 01ecf663d5425f56feecdbaa2c2e8874 130 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 123 1.0E-10 T 17-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BJD13_16880 6914e2aa6d8023bdeef9d7842ff118e0 106 Pfam PF08850 Domain of unknown function (DUF1820) 5 100 2.5E-37 T 17-10-2018 IPR014949 Protein of unknown function DUF1820 BJD13_16880 6914e2aa6d8023bdeef9d7842ff118e0 106 PIRSF PIRSF028538 1 106 4.9E-50 T 17-10-2018 IPR014949 Protein of unknown function DUF1820 BJD13_07550 cab324cffc555baca28520a73d6ee05e 350 Gene3D G3DSA:3.30.43.10 8 79 1.1E-17 T 17-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 BJD13_07550 cab324cffc555baca28520a73d6ee05e 350 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 19 347 2.1E-63 T 17-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BJD13_07550 cab324cffc555baca28520a73d6ee05e 350 Gene3D G3DSA:3.30.465.10 81 234 1.2E-52 T 17-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 BJD13_07550 cab324cffc555baca28520a73d6ee05e 350 Gene3D G3DSA:3.90.78.10 235 350 2.1E-41 T 17-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BJD13_07550 cab324cffc555baca28520a73d6ee05e 350 Pfam PF01565 FAD binding domain 35 153 2.3E-16 T 17-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 BJD13_07550 cab324cffc555baca28520a73d6ee05e 350 SUPERFAMILY SSF56194 220 348 8.24E-44 T 17-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BJD13_07550 cab324cffc555baca28520a73d6ee05e 350 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 350 80.469 T 17-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BJD13_07550 cab324cffc555baca28520a73d6ee05e 350 SUPERFAMILY SSF56176 17 202 6.0E-37 T 17-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 BJD13_07550 cab324cffc555baca28520a73d6ee05e 350 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 222 346 1.6E-32 T 17-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BJD13_16480 091739cfd3e103baf9b2766316c28e5f 336 PIRSF PIRSF000904 1 336 4.7E-124 T 17-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 BJD13_16480 091739cfd3e103baf9b2766316c28e5f 336 SUPERFAMILY SSF56655 4 330 1.06E-112 T 17-10-2018 BJD13_16480 091739cfd3e103baf9b2766316c28e5f 336 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 4 332 45.787 T 17-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 BJD13_16480 091739cfd3e103baf9b2766316c28e5f 336 Gene3D G3DSA:3.30.540.10 2 194 9.0E-70 T 17-10-2018 BJD13_16480 091739cfd3e103baf9b2766316c28e5f 336 PIRSF PIRSF500210 1 335 2.7E-125 T 17-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 BJD13_16480 091739cfd3e103baf9b2766316c28e5f 336 Gene3D G3DSA:3.40.190.80 195 331 4.0E-55 T 17-10-2018 BJD13_16480 091739cfd3e103baf9b2766316c28e5f 336 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 6 192 8.7E-60 T 17-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 BJD13_16480 091739cfd3e103baf9b2766316c28e5f 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 28 55 1.8E-68 T 17-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 BJD13_16480 091739cfd3e103baf9b2766316c28e5f 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 204 231 1.8E-68 T 17-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 BJD13_16480 091739cfd3e103baf9b2766316c28e5f 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 178 201 1.8E-68 T 17-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 BJD13_16480 091739cfd3e103baf9b2766316c28e5f 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 306 331 1.8E-68 T 17-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 BJD13_16480 091739cfd3e103baf9b2766316c28e5f 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 147 170 1.8E-68 T 17-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 BJD13_16480 091739cfd3e103baf9b2766316c28e5f 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 65 91 1.8E-68 T 17-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 BJD13_10885 d3d2fdf7422e7107f149fbc9266003ad 400 SUPERFAMILY SSF140931 108 306 2.22E-35 T 17-10-2018 IPR036597 Fido-like domain superfamily BJD13_10885 d3d2fdf7422e7107f149fbc9266003ad 400 Gene3D G3DSA:1.10.10.10 288 394 4.4E-7 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_10885 d3d2fdf7422e7107f149fbc9266003ad 400 Pfam PF13776 Domain of unknown function (DUF4172) 12 93 1.7E-29 T 17-10-2018 IPR025230 Domain of unknown function DUF4172 BJD13_10885 d3d2fdf7422e7107f149fbc9266003ad 400 Gene3D G3DSA:1.10.3290.10 53 287 7.9E-36 T 17-10-2018 IPR036597 Fido-like domain superfamily BJD13_10885 d3d2fdf7422e7107f149fbc9266003ad 400 Pfam PF02661 Fic/DOC family 122 235 6.0E-15 T 17-10-2018 IPR003812 Fido domain BJD13_10885 d3d2fdf7422e7107f149fbc9266003ad 400 SUPERFAMILY SSF46785 279 379 2.83E-7 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_23330 f691b11d3b6269ddb630f4d4e0323973 728 Gene3D G3DSA:3.30.460.10 207 338 3.5E-49 T 17-10-2018 BJD13_23330 f691b11d3b6269ddb630f4d4e0323973 728 Pfam PF13328 HD domain 64 190 1.1E-17 T 17-10-2018 IPR003607 HD/PDEase domain BJD13_23330 f691b11d3b6269ddb630f4d4e0323973 728 SUPERFAMILY SSF55021 651 726 2.29E-8 T 17-10-2018 BJD13_23330 f691b11d3b6269ddb630f4d4e0323973 728 SMART SM00954 249 359 2.9E-67 T 17-10-2018 IPR007685 RelA/SpoT GO:0015969 BJD13_23330 f691b11d3b6269ddb630f4d4e0323973 728 Pfam PF13291 ACT domain 649 726 1.3E-18 T 17-10-2018 IPR002912 ACT domain BJD13_23330 f691b11d3b6269ddb630f4d4e0323973 728 Gene3D G3DSA:3.10.20.30 394 469 1.4E-30 T 17-10-2018 IPR012675 Beta-grasp domain superfamily BJD13_23330 f691b11d3b6269ddb630f4d4e0323973 728 Gene3D G3DSA:3.30.70.260 649 728 9.2E-15 T 17-10-2018 BJD13_23330 f691b11d3b6269ddb630f4d4e0323973 728 SUPERFAMILY SSF109604 59 204 3.45E-22 T 17-10-2018 BJD13_23330 f691b11d3b6269ddb630f4d4e0323973 728 Pfam PF02824 TGS domain 402 460 2.9E-20 T 17-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 BJD13_23330 f691b11d3b6269ddb630f4d4e0323973 728 SUPERFAMILY SSF81271 396 460 1.24E-19 T 17-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 BJD13_23330 f691b11d3b6269ddb630f4d4e0323973 728 Gene3D G3DSA:1.10.3210.10 60 205 9.3E-24 T 17-10-2018 BJD13_23330 f691b11d3b6269ddb630f4d4e0323973 728 Pfam PF04607 Region found in RelA / SpoT proteins 249 359 1.7E-37 T 17-10-2018 IPR007685 RelA/SpoT GO:0015969 BJD13_23330 f691b11d3b6269ddb630f4d4e0323973 728 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 65 725 2.3E-163 T 17-10-2018 IPR004811 RelA/SpoT family GO:0015969 BJD13_23330 f691b11d3b6269ddb630f4d4e0323973 728 SUPERFAMILY SSF81301 206 378 1.08E-63 T 17-10-2018 BJD13_12460 cb23755f40459419b8edc567e092e5c6 811 Pfam PF04453 Organic solvent tolerance protein 300 708 2.5E-101 T 17-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 BJD13_12460 cb23755f40459419b8edc567e092e5c6 811 Pfam PF03968 OstA-like protein 66 195 2.1E-7 T 17-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal BJD13_12460 cb23755f40459419b8edc567e092e5c6 811 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 11 769 19.903 T 17-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 BJD13_16470 d18df63a56fc0b9c7ebd90e8c4c330b4 712 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 162 1.6E-18 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_16470 d18df63a56fc0b9c7ebd90e8c4c330b4 712 Pfam PF00593 TonB dependent receptor 234 708 1.2E-47 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_16470 d18df63a56fc0b9c7ebd90e8c4c330b4 712 Gene3D G3DSA:2.170.130.10 40 165 2.4E-18 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_16470 d18df63a56fc0b9c7ebd90e8c4c330b4 712 SUPERFAMILY SSF56935 36 710 1.14E-104 T 17-10-2018 BJD13_16470 d18df63a56fc0b9c7ebd90e8c4c330b4 712 Gene3D G3DSA:2.40.170.20 171 710 8.9E-90 T 17-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BJD13_16680 f02d5d10d3e1ecee6dcd199471ecb813 303 SUPERFAMILY SSF46785 4 86 2.67E-17 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_16680 f02d5d10d3e1ecee6dcd199471ecb813 303 Pfam PF03466 LysR substrate binding domain 88 291 1.7E-37 T 17-10-2018 IPR005119 LysR, substrate-binding BJD13_16680 f02d5d10d3e1ecee6dcd199471ecb813 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.8E-16 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_16680 f02d5d10d3e1ecee6dcd199471ecb813 303 SUPERFAMILY SSF53850 82 293 1.61E-40 T 17-10-2018 BJD13_16680 f02d5d10d3e1ecee6dcd199471ecb813 303 Gene3D G3DSA:3.40.190.290 89 291 2.8E-58 T 17-10-2018 BJD13_16680 f02d5d10d3e1ecee6dcd199471ecb813 303 Gene3D G3DSA:1.10.10.10 3 86 1.2E-22 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_00060 956f2c171ed2ed62fc453ef12899815e 206 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 199 2.6E-48 T 17-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 BJD13_00060 956f2c171ed2ed62fc453ef12899815e 206 Gene3D G3DSA:2.40.50.140 1 127 1.3E-43 T 17-10-2018 BJD13_00060 956f2c171ed2ed62fc453ef12899815e 206 Pfam PF00436 Single-strand binding protein family 5 108 1.6E-38 T 17-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 BJD13_00060 956f2c171ed2ed62fc453ef12899815e 206 SUPERFAMILY SSF50249 3 148 7.2E-49 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD13_00060 956f2c171ed2ed62fc453ef12899815e 206 Hamap MF_00984 Single-stranded DNA-binding protein. 5 112 35.988 T 17-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 BJD13_08335 ee692c21a102ea818cde5205e77215e6 155 Gene3D G3DSA:3.30.1150.10 49 153 7.6E-21 T 17-10-2018 BJD13_08335 ee692c21a102ea818cde5205e77215e6 155 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 75 152 8.1E-16 T 17-10-2018 IPR006260 TonB/TolA, C-terminal BJD13_08335 ee692c21a102ea818cde5205e77215e6 155 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 75 152 7.7E-18 T 17-10-2018 IPR037682 TonB, C-terminal GO:0055085 BJD13_08335 ee692c21a102ea818cde5205e77215e6 155 SUPERFAMILY SSF74653 73 151 9.03E-18 T 17-10-2018 BJD13_21880 fad93243cd6b804dabab0aeabd65d8f6 372 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 36 298 2.5E-72 T 17-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme BJD13_21880 fad93243cd6b804dabab0aeabd65d8f6 372 Gene3D G3DSA:3.40.50.1100 24 310 1.6E-90 T 17-10-2018 BJD13_21880 fad93243cd6b804dabab0aeabd65d8f6 372 SUPERFAMILY SSF53686 20 313 1.31E-78 T 17-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BJD13_21880 fad93243cd6b804dabab0aeabd65d8f6 372 Gene3D G3DSA:3.40.50.1100 61 157 1.6E-90 T 17-10-2018 BJD13_11885 0c14d1c3da4c1760e9edb9587ff534e5 137 Gene3D G3DSA:3.90.1170.10 1 137 2.6E-57 T 17-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 BJD13_11885 0c14d1c3da4c1760e9edb9587ff534e5 137 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 4.9E-49 T 17-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 BJD13_11885 0c14d1c3da4c1760e9edb9587ff534e5 137 SUPERFAMILY SSF54686 1 134 4.19E-54 T 17-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 BJD13_11885 0c14d1c3da4c1760e9edb9587ff534e5 137 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 37.58 T 17-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_11885 0c14d1c3da4c1760e9edb9587ff534e5 137 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 17-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_11885 0c14d1c3da4c1760e9edb9587ff534e5 137 PRINTS PR00060 Ribosomal protein L16 signature 24 36 2.7E-39 T 17-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_11885 0c14d1c3da4c1760e9edb9587ff534e5 137 PRINTS PR00060 Ribosomal protein L16 signature 42 53 2.7E-39 T 17-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_11885 0c14d1c3da4c1760e9edb9587ff534e5 137 PRINTS PR00060 Ribosomal protein L16 signature 88 117 2.7E-39 T 17-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_11885 0c14d1c3da4c1760e9edb9587ff534e5 137 PRINTS PR00060 Ribosomal protein L16 signature 58 87 2.7E-39 T 17-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_11885 0c14d1c3da4c1760e9edb9587ff534e5 137 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 17-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_11885 0c14d1c3da4c1760e9edb9587ff534e5 137 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 2.6E-57 T 17-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_19720 7b7b4cd2747dd6d47010e57728d6cae2 435 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 40 420 4.4E-102 T 17-10-2018 IPR017439 Amidohydrolase GO:0016787 BJD13_19720 7b7b4cd2747dd6d47010e57728d6cae2 435 SUPERFAMILY SSF53187 29 433 1.31E-79 T 17-10-2018 BJD13_19720 7b7b4cd2747dd6d47010e57728d6cae2 435 Pfam PF01546 Peptidase family M20/M25/M40 98 426 5.1E-33 T 17-10-2018 IPR002933 Peptidase M20 GO:0016787 BJD13_19720 7b7b4cd2747dd6d47010e57728d6cae2 435 Pfam PF07687 Peptidase dimerisation domain 226 323 2.4E-7 T 17-10-2018 IPR011650 Peptidase M20, dimerisation domain BJD13_19720 7b7b4cd2747dd6d47010e57728d6cae2 435 Gene3D G3DSA:3.30.70.360 221 338 1.2E-132 T 17-10-2018 BJD13_19720 7b7b4cd2747dd6d47010e57728d6cae2 435 PIRSF PIRSF005962 25 435 1.0E-117 T 17-10-2018 IPR017439 Amidohydrolase GO:0016787 BJD13_19720 7b7b4cd2747dd6d47010e57728d6cae2 435 Gene3D G3DSA:3.40.630.10 40 417 1.2E-132 T 17-10-2018 BJD13_19720 7b7b4cd2747dd6d47010e57728d6cae2 435 SUPERFAMILY SSF55031 223 329 5.76E-27 T 17-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain BJD13_07190 b4784f2164a77ca47e6df601a403cfff 200 PIRSF PIRSF000495 2 199 9.2E-62 T 17-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 BJD13_07190 b4784f2164a77ca47e6df601a403cfff 200 Gene3D G3DSA:3.40.50.880 1 199 9.3E-63 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD13_07190 b4784f2164a77ca47e6df601a403cfff 200 Pfam PF00117 Glutamine amidotransferase class-I 6 195 4.7E-19 T 17-10-2018 IPR017926 Glutamine amidotransferase BJD13_07190 b4784f2164a77ca47e6df601a403cfff 200 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 4 197 2.1E-65 T 17-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 BJD13_07190 b4784f2164a77ca47e6df601a403cfff 200 SUPERFAMILY SSF52317 4 197 1.2E-48 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD13_07190 b4784f2164a77ca47e6df601a403cfff 200 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 3 197 31.846 T 17-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 BJD13_03500 aa3727a4b8452ea255a27c1a449f3f7e 373 Gene3D G3DSA:3.40.50.2300 60 319 1.7E-59 T 17-10-2018 BJD13_03500 aa3727a4b8452ea255a27c1a449f3f7e 373 SUPERFAMILY SSF47413 6 62 1.96E-15 T 17-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BJD13_03500 aa3727a4b8452ea255a27c1a449f3f7e 373 SMART SM00354 6 76 3.7E-13 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD13_03500 aa3727a4b8452ea255a27c1a449f3f7e 373 Pfam PF13377 Periplasmic binding protein-like domain 180 340 4.2E-36 T 17-10-2018 BJD13_03500 aa3727a4b8452ea255a27c1a449f3f7e 373 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 51 2.5E-14 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD13_03500 aa3727a4b8452ea255a27c1a449f3f7e 373 Gene3D G3DSA:3.40.50.2300 172 302 1.7E-59 T 17-10-2018 BJD13_03500 aa3727a4b8452ea255a27c1a449f3f7e 373 Gene3D G3DSA:1.10.260.40 1 59 1.5E-18 T 17-10-2018 BJD13_03500 aa3727a4b8452ea255a27c1a449f3f7e 373 SUPERFAMILY SSF53822 80 332 2.36E-54 T 17-10-2018 IPR028082 Periplasmic binding protein-like I BJD13_10955 d620ed291bc9b1e3c072601514c01124 299 PRINTS PR00625 DnaJ domain signature 25 40 1.2E-21 T 17-10-2018 IPR001623 DnaJ domain BJD13_10955 d620ed291bc9b1e3c072601514c01124 299 PRINTS PR00625 DnaJ domain signature 41 61 1.2E-21 T 17-10-2018 IPR001623 DnaJ domain BJD13_10955 d620ed291bc9b1e3c072601514c01124 299 PRINTS PR00625 DnaJ domain signature 61 80 1.2E-21 T 17-10-2018 IPR001623 DnaJ domain BJD13_10955 d620ed291bc9b1e3c072601514c01124 299 PRINTS PR00625 DnaJ domain signature 7 25 1.2E-21 T 17-10-2018 IPR001623 DnaJ domain BJD13_10955 d620ed291bc9b1e3c072601514c01124 299 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 17-10-2018 IPR018253 DnaJ domain, conserved site BJD13_10955 d620ed291bc9b1e3c072601514c01124 299 SMART SM00271 4 61 2.4E-26 T 17-10-2018 IPR001623 DnaJ domain BJD13_10955 d620ed291bc9b1e3c072601514c01124 299 Gene3D G3DSA:1.10.287.110 2 124 1.1E-32 T 17-10-2018 IPR036869 Chaperone J-domain superfamily BJD13_10955 d620ed291bc9b1e3c072601514c01124 299 SUPERFAMILY SSF49493 137 211 1.29E-9 T 17-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 BJD13_10955 d620ed291bc9b1e3c072601514c01124 299 Pfam PF00226 DnaJ domain 5 66 7.1E-24 T 17-10-2018 IPR001623 DnaJ domain BJD13_10955 d620ed291bc9b1e3c072601514c01124 299 SUPERFAMILY SSF46565 1 106 1.44E-30 T 17-10-2018 IPR036869 Chaperone J-domain superfamily BJD13_10955 d620ed291bc9b1e3c072601514c01124 299 Pfam PF01556 DnaJ C terminal domain 143 276 2.6E-23 T 17-10-2018 IPR002939 Chaperone DnaJ, C-terminal BJD13_10955 d620ed291bc9b1e3c072601514c01124 299 Gene3D G3DSA:2.60.260.20 199 276 2.9E-23 T 17-10-2018 BJD13_10955 d620ed291bc9b1e3c072601514c01124 299 Gene3D G3DSA:2.60.260.20 138 198 2.0E-13 T 17-10-2018 BJD13_10955 d620ed291bc9b1e3c072601514c01124 299 SUPERFAMILY SSF49493 205 287 9.03E-16 T 17-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 BJD13_02980 215f5972876fdc40f90a8483c9c22acd 206 Pfam PF00293 NUDIX domain 51 171 4.9E-9 T 17-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 BJD13_02980 215f5972876fdc40f90a8483c9c22acd 206 SUPERFAMILY SSF55811 12 196 3.11E-45 T 17-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BJD13_02980 215f5972876fdc40f90a8483c9c22acd 206 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 15 194 2.2E-42 T 17-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 BJD13_02980 215f5972876fdc40f90a8483c9c22acd 206 Gene3D G3DSA:3.90.79.10 8 198 1.8E-51 T 17-10-2018 BJD13_15780 5efc64a074cd4dd03e2e83f9cf0d894b 205 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 152 196 - T 17-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 BJD13_15780 5efc64a074cd4dd03e2e83f9cf0d894b 205 Gene3D G3DSA:1.10.10.60 104 205 4.5E-16 T 17-10-2018 BJD13_15780 5efc64a074cd4dd03e2e83f9cf0d894b 205 Pfam PF12833 Helix-turn-helix domain 125 201 1.1E-13 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD13_15780 5efc64a074cd4dd03e2e83f9cf0d894b 205 SMART SM00342 118 200 1.6E-8 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD13_01750 dd2a7718a9f80df40c4320c4ec3f555e 89 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 17-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site BJD13_01750 dd2a7718a9f80df40c4320c4ec3f555e 89 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 1.7E-32 T 17-10-2018 IPR000032 Phosphocarrier protein HPr-like BJD13_01750 dd2a7718a9f80df40c4320c4ec3f555e 89 Pfam PF00381 PTS HPr component phosphorylation site 3 82 5.1E-27 T 17-10-2018 IPR000032 Phosphocarrier protein HPr-like BJD13_01750 dd2a7718a9f80df40c4320c4ec3f555e 89 SUPERFAMILY SSF55594 1 88 8.11E-27 T 17-10-2018 IPR035895 HPr-like superfamily BJD13_01750 dd2a7718a9f80df40c4320c4ec3f555e 89 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 17-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site BJD13_01750 dd2a7718a9f80df40c4320c4ec3f555e 89 PRINTS PR00107 Phosphocarrier protein signature 38 53 2.0E-16 T 17-10-2018 IPR000032 Phosphocarrier protein HPr-like BJD13_01750 dd2a7718a9f80df40c4320c4ec3f555e 89 PRINTS PR00107 Phosphocarrier protein signature 13 29 2.0E-16 T 17-10-2018 IPR000032 Phosphocarrier protein HPr-like BJD13_01750 dd2a7718a9f80df40c4320c4ec3f555e 89 PRINTS PR00107 Phosphocarrier protein signature 53 70 2.0E-16 T 17-10-2018 IPR000032 Phosphocarrier protein HPr-like BJD13_01750 dd2a7718a9f80df40c4320c4ec3f555e 89 Gene3D G3DSA:3.30.1340.10 1 88 2.1E-29 T 17-10-2018 IPR035895 HPr-like superfamily BJD13_09220 3119652adeeb72b7d7e181443487a472 142 Gene3D G3DSA:1.20.120.10 37 142 1.4E-5 T 17-10-2018 BJD13_09220 3119652adeeb72b7d7e181443487a472 142 SUPERFAMILY SSF47175 31 142 2.8E-17 T 17-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 BJD13_09220 3119652adeeb72b7d7e181443487a472 142 Pfam PF01322 Cytochrome C' 90 142 4.8E-5 T 17-10-2018 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 BJD13_09675 da69d367743a3d6f02b81b0f7b777ec9 187 Gene3D G3DSA:1.10.10.10 96 187 1.6E-25 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_09675 da69d367743a3d6f02b81b0f7b777ec9 187 SUPERFAMILY SSF88946 7 106 1.22E-24 T 17-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BJD13_09675 da69d367743a3d6f02b81b0f7b777ec9 187 Pfam PF08281 Sigma-70, region 4 128 181 2.9E-12 T 17-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BJD13_09675 da69d367743a3d6f02b81b0f7b777ec9 187 SUPERFAMILY SSF88659 113 186 5.23E-13 T 17-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BJD13_09675 da69d367743a3d6f02b81b0f7b777ec9 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 25 185 2.2E-28 T 17-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BJD13_09675 da69d367743a3d6f02b81b0f7b777ec9 187 Pfam PF04542 Sigma-70 region 2 30 97 3.0E-15 T 17-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BJD13_09675 da69d367743a3d6f02b81b0f7b777ec9 187 Gene3D G3DSA:1.10.1740.10 11 95 3.3E-30 T 17-10-2018 BJD13_23415 8a57ff84fdda5a0ca4d2de14a098f58e 176 SMART SM00260 29 166 2.9E-7 T 17-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BJD13_23415 8a57ff84fdda5a0ca4d2de14a098f58e 176 Gene3D G3DSA:2.40.50.180 52 135 4.0E-18 T 17-10-2018 BJD13_23415 8a57ff84fdda5a0ca4d2de14a098f58e 176 SUPERFAMILY SSF50341 28 169 1.16E-25 T 17-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 BJD13_23415 8a57ff84fdda5a0ca4d2de14a098f58e 176 Pfam PF01584 CheW-like domain 35 153 3.6E-25 T 17-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BJD13_02250 447b7aa54053bfe0678c87c62658b5e4 249 SMART SM00855 4 190 6.4E-26 T 17-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 BJD13_02250 447b7aa54053bfe0678c87c62658b5e4 249 PIRSF PIRSF000709 173 240 0.0041 T 17-10-2018 BJD13_02250 447b7aa54053bfe0678c87c62658b5e4 249 PIRSF PIRSF000709 1 115 6.8E-8 T 17-10-2018 BJD13_02250 447b7aa54053bfe0678c87c62658b5e4 249 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 124 4.0E-29 T 17-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 BJD13_02250 447b7aa54053bfe0678c87c62658b5e4 249 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 138 209 4.3E-5 T 17-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 BJD13_02250 447b7aa54053bfe0678c87c62658b5e4 249 SUPERFAMILY SSF53254 2 246 2.75E-78 T 17-10-2018 IPR029033 Histidine phosphatase superfamily BJD13_02250 447b7aa54053bfe0678c87c62658b5e4 249 Gene3D G3DSA:3.40.50.1240 2 249 7.5E-87 T 17-10-2018 IPR029033 Histidine phosphatase superfamily BJD13_02250 447b7aa54053bfe0678c87c62658b5e4 249 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 2 229 44.63 T 17-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 BJD13_02250 447b7aa54053bfe0678c87c62658b5e4 249 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 7 16 - T 17-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 BJD13_02250 447b7aa54053bfe0678c87c62658b5e4 249 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 4 247 1.6E-121 T 17-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 BJD13_15440 b58128b0caa64127bac33e837adca436 426 SUPERFAMILY SSF103473 13 407 2.88E-59 T 17-10-2018 IPR036259 MFS transporter superfamily BJD13_15440 b58128b0caa64127bac33e837adca436 426 ProSitePatterns PS00216 Sugar transport proteins signature 1. 84 100 - T 17-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 BJD13_15440 b58128b0caa64127bac33e837adca436 426 Pfam PF07690 Major Facilitator Superfamily 34 250 2.1E-21 T 17-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD13_15440 b58128b0caa64127bac33e837adca436 426 Gene3D G3DSA:1.20.1250.20 24 410 8.2E-46 T 17-10-2018 BJD13_21420 2e5257aa35aa65ef8ba5071a3ef6e85e 627 Gene3D G3DSA:3.40.50.200 158 516 2.0E-101 T 17-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BJD13_21420 2e5257aa35aa65ef8ba5071a3ef6e85e 627 Pfam PF00082 Subtilase family 190 487 2.5E-49 T 17-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 BJD13_21420 2e5257aa35aa65ef8ba5071a3ef6e85e 627 SUPERFAMILY SSF52743 170 511 2.49E-76 T 17-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BJD13_21420 2e5257aa35aa65ef8ba5071a3ef6e85e 627 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 444 454 - T 17-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site BJD13_21420 2e5257aa35aa65ef8ba5071a3ef6e85e 627 Gene3D G3DSA:2.60.120.380 528 626 4.7E-28 T 17-10-2018 BJD13_21420 2e5257aa35aa65ef8ba5071a3ef6e85e 627 PRINTS PR00723 Subtilisin serine protease family (S8) signature 190 209 4.2E-21 T 17-10-2018 IPR015500 Peptidase S8, subtilisin-related BJD13_21420 2e5257aa35aa65ef8ba5071a3ef6e85e 627 PRINTS PR00723 Subtilisin serine protease family (S8) signature 443 459 4.2E-21 T 17-10-2018 IPR015500 Peptidase S8, subtilisin-related BJD13_21420 2e5257aa35aa65ef8ba5071a3ef6e85e 627 PRINTS PR00723 Subtilisin serine protease family (S8) signature 258 271 4.2E-21 T 17-10-2018 IPR015500 Peptidase S8, subtilisin-related BJD13_21420 2e5257aa35aa65ef8ba5071a3ef6e85e 627 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 547 611 3.6E-13 T 17-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial BJD13_21420 2e5257aa35aa65ef8ba5071a3ef6e85e 627 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 195 206 - T 17-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site BJD13_06815 38611a76240607c281c4909577def089 761 Gene3D G3DSA:1.10.287.950 396 697 2.1E-84 T 17-10-2018 BJD13_06815 38611a76240607c281c4909577def089 761 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 508 662 5.0E-53 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD13_06815 38611a76240607c281c4909577def089 761 SUPERFAMILY SSF158472 214 263 2.75E-9 T 17-10-2018 BJD13_06815 38611a76240607c281c4909577def089 761 SMART SM00283 448 695 6.4E-87 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD13_06815 38611a76240607c281c4909577def089 761 Pfam PF00672 HAMP domain 214 263 1.4E-8 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_06815 38611a76240607c281c4909577def089 761 SMART SM00304 214 266 1.3E-9 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_06815 38611a76240607c281c4909577def089 761 SMART SM00304 395 447 28.0 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_06815 38611a76240607c281c4909577def089 761 Gene3D G3DSA:1.20.120.1530 205 352 2.6E-45 T 17-10-2018 BJD13_06815 38611a76240607c281c4909577def089 761 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 185 4.0E-23 T 17-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain BJD13_06815 38611a76240607c281c4909577def089 761 SUPERFAMILY SSF58104 415 696 4.19E-70 T 17-10-2018 BJD13_02665 a969fa601638d307d75416f99db56b3c 330 Gene3D G3DSA:3.40.190.10 104 287 6.6E-51 T 17-10-2018 BJD13_02665 a969fa601638d307d75416f99db56b3c 330 SUPERFAMILY SSF46785 8 84 9.79E-20 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_02665 a969fa601638d307d75416f99db56b3c 330 Pfam PF03466 LysR substrate binding domain 95 291 1.2E-39 T 17-10-2018 IPR005119 LysR, substrate-binding BJD13_02665 a969fa601638d307d75416f99db56b3c 330 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 67 2.3E-18 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_02665 a969fa601638d307d75416f99db56b3c 330 Gene3D G3DSA:3.40.190.10 163 260 6.6E-51 T 17-10-2018 BJD13_02665 a969fa601638d307d75416f99db56b3c 330 Gene3D G3DSA:1.10.10.10 8 93 3.3E-21 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_02665 a969fa601638d307d75416f99db56b3c 330 SUPERFAMILY SSF53850 96 295 3.8E-41 T 17-10-2018 BJD13_02665 a969fa601638d307d75416f99db56b3c 330 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 7.0E-6 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_02665 a969fa601638d307d75416f99db56b3c 330 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 7.0E-6 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_02665 a969fa601638d307d75416f99db56b3c 330 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 7.0E-6 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_17925 c400e1984061f3f123c160619cfa6960 593 Gene3D G3DSA:3.10.20.310 199 275 5.2E-17 T 17-10-2018 BJD13_17925 c400e1984061f3f123c160619cfa6960 593 Pfam PF01103 Surface antigen 304 582 2.3E-33 T 17-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 BJD13_17925 c400e1984061f3f123c160619cfa6960 593 Gene3D G3DSA:3.10.20.310 111 198 5.0E-19 T 17-10-2018 BJD13_17925 c400e1984061f3f123c160619cfa6960 593 Gene3D G3DSA:2.40.160.50 276 593 2.1E-85 T 17-10-2018 BJD13_17925 c400e1984061f3f123c160619cfa6960 593 Pfam PF07244 Surface antigen variable number repeat 119 190 1.9E-5 T 17-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 BJD13_17925 c400e1984061f3f123c160619cfa6960 593 Gene3D G3DSA:3.10.20.310 26 110 5.7E-8 T 17-10-2018 BJD13_17925 c400e1984061f3f123c160619cfa6960 593 Pfam PF17243 POTRA domain TamA domain 1 28 108 8.3E-17 T 17-10-2018 IPR035243 TamA, POTRA domain 1 BJD13_14220 237884a496772b8a82afdfb400f3979b 129 Pfam PF05635 23S rRNA-intervening sequence protein 12 116 1.9E-35 T 17-10-2018 IPR012657 23S rRNA-intervening sequence protein BJD13_14220 237884a496772b8a82afdfb400f3979b 129 Gene3D G3DSA:1.20.1440.60 1 128 1.1E-50 T 17-10-2018 IPR036583 23S rRNA-intervening sequence superfamily BJD13_14220 237884a496772b8a82afdfb400f3979b 129 SUPERFAMILY SSF158446 10 123 2.62E-36 T 17-10-2018 IPR036583 23S rRNA-intervening sequence superfamily BJD13_14220 237884a496772b8a82afdfb400f3979b 129 TIGRFAM TIGR02436 TIGR02436: four helix bundle protein 17 122 1.4E-35 T 17-10-2018 IPR012657 23S rRNA-intervening sequence protein BJD13_12710 13341d7957771d5881aae8e4158165bd 228 Gene3D G3DSA:3.40.50.300 1 206 2.0E-61 T 17-10-2018 BJD13_12710 13341d7957771d5881aae8e4158165bd 228 SUPERFAMILY SSF52540 5 190 1.02E-20 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_18150 167a28581c8d965618595b46a7450c2a 259 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 247 8.4E-24 T 17-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase BJD13_18150 167a28581c8d965618595b46a7450c2a 259 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 211 222 - T 17-10-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 BJD13_18150 167a28581c8d965618595b46a7450c2a 259 SUPERFAMILY SSF56219 1 254 2.62E-75 T 17-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BJD13_18150 167a28581c8d965618595b46a7450c2a 259 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 253 2.9E-80 T 17-10-2018 BJD13_18150 167a28581c8d965618595b46a7450c2a 259 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 17-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 BJD13_18150 167a28581c8d965618595b46a7450c2a 259 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 254 5.8E-74 T 17-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 BJD13_18150 167a28581c8d965618595b46a7450c2a 259 Gene3D G3DSA:3.60.10.10 1 255 4.4E-72 T 17-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BJD13_06205 bd1ecc86e5cdc1d4090b0d95b1f96ce2 406 Pfam PF00994 Probable molybdopterin binding domain 183 318 3.3E-26 T 17-10-2018 IPR001453 MoaB/Mog domain BJD13_06205 bd1ecc86e5cdc1d4090b0d95b1f96ce2 406 Gene3D G3DSA:3.90.105.10 29 177 1.3E-126 T 17-10-2018 BJD13_06205 bd1ecc86e5cdc1d4090b0d95b1f96ce2 406 SUPERFAMILY SSF63867 327 404 1.57E-19 T 17-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BJD13_06205 bd1ecc86e5cdc1d4090b0d95b1f96ce2 406 Gene3D G3DSA:2.170.190.11 52 144 1.3E-126 T 17-10-2018 BJD13_06205 bd1ecc86e5cdc1d4090b0d95b1f96ce2 406 Pfam PF03454 MoeA C-terminal region (domain IV) 333 403 4.4E-16 T 17-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BJD13_06205 bd1ecc86e5cdc1d4090b0d95b1f96ce2 406 Gene3D G3DSA:2.40.340.10 330 399 1.3E-126 T 17-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BJD13_06205 bd1ecc86e5cdc1d4090b0d95b1f96ce2 406 SMART SM00852 183 320 3.9E-38 T 17-10-2018 IPR001453 MoaB/Mog domain BJD13_06205 bd1ecc86e5cdc1d4090b0d95b1f96ce2 406 SUPERFAMILY SSF63882 4 179 7.59E-49 T 17-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BJD13_06205 bd1ecc86e5cdc1d4090b0d95b1f96ce2 406 Gene3D G3DSA:3.40.980.10 178 329 1.3E-126 T 17-10-2018 IPR036425 MoaB/Mog-like domain superfamily BJD13_06205 bd1ecc86e5cdc1d4090b0d95b1f96ce2 406 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 180 310 2.9E-30 T 17-10-2018 IPR001453 MoaB/Mog domain BJD13_06205 bd1ecc86e5cdc1d4090b0d95b1f96ce2 406 Pfam PF03453 MoeA N-terminal region (domain I and II) 9 170 6.2E-41 T 17-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BJD13_06205 bd1ecc86e5cdc1d4090b0d95b1f96ce2 406 SUPERFAMILY SSF53218 180 324 8.11E-41 T 17-10-2018 IPR036425 MoaB/Mog-like domain superfamily BJD13_17130 1467d330e7f848ba06b06567fb0b1b7a 526 SUPERFAMILY SSF58113 134 270 4.71E-5 T 17-10-2018 BJD13_17130 1467d330e7f848ba06b06567fb0b1b7a 526 Pfam PF02646 RmuC family 214 502 2.5E-75 T 17-10-2018 IPR003798 DNA recombination RmuC BJD13_17130 1467d330e7f848ba06b06567fb0b1b7a 526 Gene3D G3DSA:1.20.120.20 132 269 8.2E-6 T 17-10-2018 BJD13_03120 dac7db6c7c9ead59661588fb3001a6e0 157 PRINTS PR01651 Protein-export SecG membrane protein signature 24 38 4.6E-35 T 17-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 BJD13_03120 dac7db6c7c9ead59661588fb3001a6e0 157 PRINTS PR01651 Protein-export SecG membrane protein signature 4 24 4.6E-35 T 17-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 BJD13_03120 dac7db6c7c9ead59661588fb3001a6e0 157 PRINTS PR01651 Protein-export SecG membrane protein signature 39 55 4.6E-35 T 17-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 BJD13_03120 dac7db6c7c9ead59661588fb3001a6e0 157 PRINTS PR01651 Protein-export SecG membrane protein signature 55 77 4.6E-35 T 17-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 BJD13_03120 dac7db6c7c9ead59661588fb3001a6e0 157 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 4 73 4.5E-22 T 17-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 BJD13_03120 dac7db6c7c9ead59661588fb3001a6e0 157 Pfam PF03840 Preprotein translocase SecG subunit 5 72 7.3E-19 T 17-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 BJD13_13920 abe035156ed8bd88648ca9cc6769204c 232 Pfam PF01797 Transposase IS200 like 14 122 4.4E-17 T 17-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 BJD13_13920 abe035156ed8bd88648ca9cc6769204c 232 SUPERFAMILY SSF143422 3 127 2.35E-34 T 17-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 BJD13_13920 abe035156ed8bd88648ca9cc6769204c 232 Gene3D G3DSA:3.30.70.1290 1 155 4.9E-35 T 17-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 BJD13_13920 abe035156ed8bd88648ca9cc6769204c 232 SMART SM01321 9 124 6.7E-46 T 17-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 BJD13_05390 2395c6187f4330de4881690d70146643 259 Pfam PF02348 Cytidylyltransferase 11 230 1.9E-47 T 17-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 BJD13_05390 2395c6187f4330de4881690d70146643 259 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 7 257 39.182 T 17-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 BJD13_05390 2395c6187f4330de4881690d70146643 259 SUPERFAMILY SSF53448 9 253 1.82E-58 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD13_05390 2395c6187f4330de4881690d70146643 259 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 9 249 9.0E-80 T 17-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 BJD13_05390 2395c6187f4330de4881690d70146643 259 Gene3D G3DSA:3.90.550.10 4 256 3.5E-85 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD13_16735 726e505fdcd252d39cb63e020a09f910 385 Gene3D G3DSA:3.30.420.40 225 350 1.1E-11 T 17-10-2018 BJD13_16735 726e505fdcd252d39cb63e020a09f910 385 Gene3D G3DSA:3.30.420.40 90 224 7.2E-20 T 17-10-2018 BJD13_16735 726e505fdcd252d39cb63e020a09f910 385 Gene3D G3DSA:1.10.10.10 19 88 2.4E-8 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_16735 726e505fdcd252d39cb63e020a09f910 385 SUPERFAMILY SSF46785 26 85 2.63E-7 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_16735 726e505fdcd252d39cb63e020a09f910 385 SUPERFAMILY SSF53067 94 381 6.76E-26 T 17-10-2018 BJD13_16735 726e505fdcd252d39cb63e020a09f910 385 Pfam PF00480 ROK family 97 260 3.1E-18 T 17-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 BJD13_06245 c451c439c6fd0b2e32d3e5ba5aca790c 210 Gene3D G3DSA:1.10.357.10 5 209 2.1E-61 T 17-10-2018 BJD13_06245 c451c439c6fd0b2e32d3e5ba5aca790c 210 SUPERFAMILY SSF48498 83 207 1.51E-29 T 17-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BJD13_06245 c451c439c6fd0b2e32d3e5ba5aca790c 210 SUPERFAMILY SSF46689 8 76 2.98E-18 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_06245 c451c439c6fd0b2e32d3e5ba5aca790c 210 ProSitePatterns PS01081 TetR-type HTH domain signature. 25 56 - T 17-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BJD13_06245 c451c439c6fd0b2e32d3e5ba5aca790c 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 1.7E-14 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD13_06245 c451c439c6fd0b2e32d3e5ba5aca790c 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 7.3E-8 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD13_06245 c451c439c6fd0b2e32d3e5ba5aca790c 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 7.3E-8 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD13_06905 0fcae3d326d3cdaef53a0cae3a01594c 160 Gene3D G3DSA:2.40.50.180 32 141 6.3E-44 T 17-10-2018 BJD13_06905 0fcae3d326d3cdaef53a0cae3a01594c 160 SUPERFAMILY SSF50341 12 150 3.79E-42 T 17-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 BJD13_06905 0fcae3d326d3cdaef53a0cae3a01594c 160 Gene3D G3DSA:2.30.30.40 16 140 6.3E-44 T 17-10-2018 BJD13_06905 0fcae3d326d3cdaef53a0cae3a01594c 160 SMART SM00260 9 146 3.0E-45 T 17-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BJD13_06905 0fcae3d326d3cdaef53a0cae3a01594c 160 Pfam PF01584 CheW-like domain 13 149 9.0E-40 T 17-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BJD13_10045 6d5a425d9e211c02ca55755a9efb6c2c 393 Gene3D G3DSA:2.40.110.10 130 241 1.5E-44 T 17-10-2018 BJD13_10045 6d5a425d9e211c02ca55755a9efb6c2c 393 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 15 125 5.0E-31 T 17-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 BJD13_10045 6d5a425d9e211c02ca55755a9efb6c2c 393 PIRSF PIRSF016578 221 392 1.9E-15 T 17-10-2018 BJD13_10045 6d5a425d9e211c02ca55755a9efb6c2c 393 PIRSF PIRSF016578 7 201 1.3E-10 T 17-10-2018 BJD13_10045 6d5a425d9e211c02ca55755a9efb6c2c 393 SUPERFAMILY SSF56645 13 249 1.11E-82 T 17-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 BJD13_10045 6d5a425d9e211c02ca55755a9efb6c2c 393 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 236 386 1.5E-49 T 17-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 BJD13_10045 6d5a425d9e211c02ca55755a9efb6c2c 393 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 344 363 - T 17-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 BJD13_10045 6d5a425d9e211c02ca55755a9efb6c2c 393 Gene3D G3DSA:1.20.140.10 242 392 6.6E-56 T 17-10-2018 BJD13_10045 6d5a425d9e211c02ca55755a9efb6c2c 393 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 132 144 - T 17-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 BJD13_10045 6d5a425d9e211c02ca55755a9efb6c2c 393 Gene3D G3DSA:1.10.540.10 2 127 1.0E-36 T 17-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 BJD13_10045 6d5a425d9e211c02ca55755a9efb6c2c 393 SUPERFAMILY SSF47203 235 388 6.12E-60 T 17-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 BJD13_10045 6d5a425d9e211c02ca55755a9efb6c2c 393 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 130 224 1.1E-26 T 17-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 BJD13_11015 ae30ff4ca8de7d25519aabfed43de151 399 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 5 395 3.1E-235 T 17-10-2018 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 BJD13_11015 ae30ff4ca8de7d25519aabfed43de151 399 Gene3D G3DSA:3.10.310.10 11 389 1.5E-149 T 17-10-2018 BJD13_11015 ae30ff4ca8de7d25519aabfed43de151 399 SUPERFAMILY SSF54506 3 182 7.85E-71 T 17-10-2018 BJD13_11015 ae30ff4ca8de7d25519aabfed43de151 399 SUPERFAMILY SSF54506 190 393 4.55E-75 T 17-10-2018 BJD13_11015 ae30ff4ca8de7d25519aabfed43de151 399 Gene3D G3DSA:3.10.310.10 181 375 1.5E-149 T 17-10-2018 BJD13_11015 ae30ff4ca8de7d25519aabfed43de151 399 Pfam PF04303 PrpF protein 6 392 2.9E-173 T 17-10-2018 IPR007400 PrpF protein BJD13_13445 68dfb29e1b2dd6e602353afe5e2d528f 368 Gene3D G3DSA:3.90.180.10 6 363 5.7E-135 T 17-10-2018 BJD13_13445 68dfb29e1b2dd6e602353afe5e2d528f 368 SUPERFAMILY SSF50129 317 368 1.65E-5 T 17-10-2018 IPR011032 GroES-like superfamily BJD13_13445 68dfb29e1b2dd6e602353afe5e2d528f 368 SUPERFAMILY SSF50129 1 180 1.22E-65 T 17-10-2018 IPR011032 GroES-like superfamily BJD13_13445 68dfb29e1b2dd6e602353afe5e2d528f 368 SUPERFAMILY SSF51735 159 332 3.85E-44 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_13445 68dfb29e1b2dd6e602353afe5e2d528f 368 Pfam PF00107 Zinc-binding dehydrogenase 196 321 3.0E-22 T 17-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 BJD13_13445 68dfb29e1b2dd6e602353afe5e2d528f 368 Gene3D G3DSA:3.40.50.720 173 311 5.7E-135 T 17-10-2018 BJD13_13445 68dfb29e1b2dd6e602353afe5e2d528f 368 SMART SM00829 10 366 0.0019 T 17-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 BJD13_13445 68dfb29e1b2dd6e602353afe5e2d528f 368 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 148 4.5E-21 T 17-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 BJD13_13445 68dfb29e1b2dd6e602353afe5e2d528f 368 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2 367 1.9E-180 T 17-10-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 BJD13_17035 85a475392d8f2f86066c9fcb944b0886 262 Pfam PF01694 Rhomboid family 61 196 6.6E-19 T 17-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 BJD13_17035 85a475392d8f2f86066c9fcb944b0886 262 SUPERFAMILY SSF144091 20 199 7.06E-27 T 17-10-2018 BJD13_17035 85a475392d8f2f86066c9fcb944b0886 262 Gene3D G3DSA:1.20.1540.10 19 202 5.3E-17 T 17-10-2018 IPR035952 Rhomboid-like superfamily BJD13_13540 14135d1d012a7dcc1ed8b916a38d3800 284 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 73 87 - T 17-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 BJD13_13540 14135d1d012a7dcc1ed8b916a38d3800 284 Gene3D G3DSA:3.10.310.10 124 271 2.3E-91 T 17-10-2018 BJD13_13540 14135d1d012a7dcc1ed8b916a38d3800 284 SUPERFAMILY SSF54506 149 283 6.6E-48 T 17-10-2018 BJD13_13540 14135d1d012a7dcc1ed8b916a38d3800 284 SUPERFAMILY SSF54506 10 139 7.32E-39 T 17-10-2018 BJD13_13540 14135d1d012a7dcc1ed8b916a38d3800 284 Gene3D G3DSA:3.10.310.10 12 280 2.3E-91 T 17-10-2018 BJD13_13540 14135d1d012a7dcc1ed8b916a38d3800 284 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 10 284 35.998 T 17-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 BJD13_13540 14135d1d012a7dcc1ed8b916a38d3800 284 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 11 282 3.1E-78 T 17-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 BJD13_13540 14135d1d012a7dcc1ed8b916a38d3800 284 Pfam PF01678 Diaminopimelate epimerase 162 277 6.1E-27 T 17-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 BJD13_13540 14135d1d012a7dcc1ed8b916a38d3800 284 Pfam PF01678 Diaminopimelate epimerase 12 131 1.7E-22 T 17-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 BJD13_19740 97b964ec84db12029527520add8e3345 743 PIRSF PIRSF009407 1 742 0.0 T 17-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 BJD13_19740 97b964ec84db12029527520add8e3345 743 Pfam PF03971 Monomeric isocitrate dehydrogenase 6 738 0.0 T 17-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 BJD13_19740 97b964ec84db12029527520add8e3345 743 SUPERFAMILY SSF53659 4 741 0.0 T 17-10-2018 BJD13_19740 97b964ec84db12029527520add8e3345 743 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 3 742 0.0 T 17-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 BJD13_19740 97b964ec84db12029527520add8e3345 743 Gene3D G3DSA:3.40.718.10 405 649 4.6E-8 T 17-10-2018 BJD13_05455 7b1cc8afb0ddeee2bf6ec3f653526044 170 Pfam PF04586 Caudovirus prohead serine protease 13 153 5.4E-39 T 17-10-2018 IPR006433 Prohead protease BJD13_05455 7b1cc8afb0ddeee2bf6ec3f653526044 170 TIGRFAM TIGR01543 proheadase_HK97: phage prohead protease, HK97 family 18 150 1.1E-28 T 17-10-2018 IPR006433 Prohead protease BJD13_14780 6adde293b1ba9d91226123a8fdb26ebc 313 PIRSF PIRSF016660 1 311 2.2E-112 T 17-10-2018 IPR008526 Inner membrane protein YedI BJD13_14780 6adde293b1ba9d91226123a8fdb26ebc 313 Pfam PF05661 Protein of unknown function (DUF808) 4 297 1.6E-110 T 17-10-2018 IPR008526 Inner membrane protein YedI BJD13_15000 72400ee8e25a195cc3518d3eebd9eb46 401 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 23 385 3.2E-145 T 17-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 BJD13_15000 72400ee8e25a195cc3518d3eebd9eb46 401 Gene3D G3DSA:3.40.640.10 60 291 1.5E-117 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD13_15000 72400ee8e25a195cc3518d3eebd9eb46 401 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 6 389 44.568 T 17-10-2018 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 BJD13_15000 72400ee8e25a195cc3518d3eebd9eb46 401 SUPERFAMILY SSF53383 8 389 1.38E-94 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD13_15000 72400ee8e25a195cc3518d3eebd9eb46 401 Gene3D G3DSA:3.90.1150.10 46 383 1.5E-117 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD13_15000 72400ee8e25a195cc3518d3eebd9eb46 401 Pfam PF00155 Aminotransferase class I and II 45 385 4.7E-51 T 17-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BJD13_22660 e8058107cc2e3ff2fdaf2375df35da2d 710 Pfam PF00128 Alpha amylase, catalytic domain 201 310 3.5E-13 T 17-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BJD13_22660 e8058107cc2e3ff2fdaf2375df35da2d 710 Gene3D G3DSA:2.60.40.1180 598 705 1.6E-14 T 17-10-2018 IPR013780 Glycosyl hydrolase, all-beta BJD13_22660 e8058107cc2e3ff2fdaf2375df35da2d 710 SUPERFAMILY SSF51011 600 707 5.68E-24 T 17-10-2018 BJD13_22660 e8058107cc2e3ff2fdaf2375df35da2d 710 SUPERFAMILY SSF81296 18 161 4.48E-49 T 17-10-2018 IPR014756 Immunoglobulin E-set BJD13_22660 e8058107cc2e3ff2fdaf2375df35da2d 710 SMART SM00642 173 578 3.4E-10 T 17-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BJD13_22660 e8058107cc2e3ff2fdaf2375df35da2d 710 SUPERFAMILY SSF51445 148 587 2.64E-138 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily BJD13_22660 e8058107cc2e3ff2fdaf2375df35da2d 710 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 24 108 2.6E-20 T 17-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 BJD13_22660 e8058107cc2e3ff2fdaf2375df35da2d 710 Gene3D G3DSA:3.20.20.80 152 592 9.7E-177 T 17-10-2018 BJD13_22660 e8058107cc2e3ff2fdaf2375df35da2d 710 Gene3D G3DSA:2.60.40.10 8 151 2.0E-51 T 17-10-2018 IPR013783 Immunoglobulin-like fold BJD13_22660 e8058107cc2e3ff2fdaf2375df35da2d 710 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 18 705 0.0 T 17-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 BJD13_16235 94e75d4087f3784671b42fa558938ec8 352 Gene3D G3DSA:3.40.50.2300 180 309 1.6E-63 T 17-10-2018 BJD13_16235 94e75d4087f3784671b42fa558938ec8 352 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 21 31 1.9E-5 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD13_16235 94e75d4087f3784671b42fa558938ec8 352 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 31 41 1.9E-5 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD13_16235 94e75d4087f3784671b42fa558938ec8 352 SMART SM00354 19 89 5.1E-25 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD13_16235 94e75d4087f3784671b42fa558938ec8 352 Gene3D G3DSA:1.10.260.40 15 73 1.2E-20 T 17-10-2018 BJD13_16235 94e75d4087f3784671b42fa558938ec8 352 SUPERFAMILY SSF53822 80 350 1.73E-61 T 17-10-2018 IPR028082 Periplasmic binding protein-like I BJD13_16235 94e75d4087f3784671b42fa558938ec8 352 Gene3D G3DSA:3.40.50.2300 74 325 1.6E-63 T 17-10-2018 BJD13_16235 94e75d4087f3784671b42fa558938ec8 352 Pfam PF13377 Periplasmic binding protein-like domain 188 347 3.4E-36 T 17-10-2018 BJD13_16235 94e75d4087f3784671b42fa558938ec8 352 ProSitePatterns PS00356 LacI-type HTH domain signature. 22 40 - T 17-10-2018 BJD13_16235 94e75d4087f3784671b42fa558938ec8 352 SUPERFAMILY SSF47413 19 77 1.48E-16 T 17-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BJD13_16235 94e75d4087f3784671b42fa558938ec8 352 Pfam PF00356 Bacterial regulatory proteins, lacI family 21 66 7.2E-19 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD13_23690 3c6974d36c55668292ff67676ba6063d 534 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 1 527 1.8E-253 T 17-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 BJD13_23690 3c6974d36c55668292ff67676ba6063d 534 SUPERFAMILY SSF54980 391 466 4.68E-17 T 17-10-2018 IPR035647 EF-G domain III/V-like BJD13_23690 3c6974d36c55668292ff67676ba6063d 534 PRINTS PR00315 GTP-binding elongation factor signature 63 71 2.2E-11 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD13_23690 3c6974d36c55668292ff67676ba6063d 534 PRINTS PR00315 GTP-binding elongation factor signature 83 93 2.2E-11 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD13_23690 3c6974d36c55668292ff67676ba6063d 534 PRINTS PR00315 GTP-binding elongation factor signature 13 26 2.2E-11 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD13_23690 3c6974d36c55668292ff67676ba6063d 534 PRINTS PR00315 GTP-binding elongation factor signature 135 144 2.2E-11 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD13_23690 3c6974d36c55668292ff67676ba6063d 534 PRINTS PR00315 GTP-binding elongation factor signature 99 110 2.2E-11 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD13_23690 3c6974d36c55668292ff67676ba6063d 534 Pfam PF16658 Class II release factor RF3, C-terminal domain 385 512 3.0E-46 T 17-10-2018 IPR032090 Peptide chain release factor 3, C-terminal BJD13_23690 3c6974d36c55668292ff67676ba6063d 534 Gene3D G3DSA:3.40.50.300 70 377 3.6E-110 T 17-10-2018 BJD13_23690 3c6974d36c55668292ff67676ba6063d 534 Pfam PF00009 Elongation factor Tu GTP binding domain 11 275 9.6E-48 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD13_23690 3c6974d36c55668292ff67676ba6063d 534 SUPERFAMILY SSF50447 259 391 1.09E-29 T 17-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BJD13_23690 3c6974d36c55668292ff67676ba6063d 534 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 2 525 53.013 T 17-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 BJD13_23690 3c6974d36c55668292ff67676ba6063d 534 Gene3D G3DSA:3.30.70.3280 388 527 2.0E-50 T 17-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily BJD13_23690 3c6974d36c55668292ff67676ba6063d 534 SUPERFAMILY SSF52540 8 275 2.42E-85 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_23690 3c6974d36c55668292ff67676ba6063d 534 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 157 1.2E-20 T 17-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BJD13_23690 3c6974d36c55668292ff67676ba6063d 534 Gene3D G3DSA:3.40.50.300 108 273 3.6E-110 T 17-10-2018 BJD13_23690 3c6974d36c55668292ff67676ba6063d 534 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 56 71 - T 17-10-2018 IPR031157 Tr-type G domain, conserved site BJD13_02105 95aea15eca76fd0d5f928148bb96a436 468 SUPERFAMILY SSF53244 310 452 7.78E-27 T 17-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BJD13_02105 95aea15eca76fd0d5f928148bb96a436 468 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 11 451 1.4E-88 T 17-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BJD13_02105 95aea15eca76fd0d5f928148bb96a436 468 Gene3D G3DSA:3.40.1190.10 103 308 4.7E-45 T 17-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BJD13_02105 95aea15eca76fd0d5f928148bb96a436 468 Pfam PF02875 Mur ligase family, glutamate ligase domain 311 383 2.5E-6 T 17-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 BJD13_02105 95aea15eca76fd0d5f928148bb96a436 468 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 118 141 - T 17-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 BJD13_02105 95aea15eca76fd0d5f928148bb96a436 468 SUPERFAMILY SSF53623 117 307 4.58E-42 T 17-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BJD13_02105 95aea15eca76fd0d5f928148bb96a436 468 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 9 455 27.603 T 17-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BJD13_02105 95aea15eca76fd0d5f928148bb96a436 468 Pfam PF08245 Mur ligase middle domain 120 290 1.7E-23 T 17-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 BJD13_02105 95aea15eca76fd0d5f928148bb96a436 468 Gene3D G3DSA:3.40.50.720 5 95 3.9E-8 T 17-10-2018 BJD13_02105 95aea15eca76fd0d5f928148bb96a436 468 Gene3D G3DSA:3.90.190.20 310 452 9.6E-32 T 17-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BJD13_08470 4d28665156770349131e0ffd31ebb27d 243 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 98 223 1.9E-37 T 17-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 BJD13_08470 4d28665156770349131e0ffd31ebb27d 243 SUPERFAMILY SSF64383 94 232 1.03E-36 T 17-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 BJD13_08470 4d28665156770349131e0ffd31ebb27d 243 SMART SM00771 95 225 1.5E-55 T 17-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 BJD13_08470 4d28665156770349131e0ffd31ebb27d 243 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 98 226 9.0E-70 T 17-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 BJD13_08470 4d28665156770349131e0ffd31ebb27d 243 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 38 225 1.5E-68 T 17-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 BJD13_08470 4d28665156770349131e0ffd31ebb27d 243 Hamap MF_00509 Cell division protein ZipA [zipA]. 5 227 17.716 T 17-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 BJD13_08470 4d28665156770349131e0ffd31ebb27d 243 Gene3D G3DSA:3.30.1400.10 93 232 1.4E-38 T 17-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 BJD13_04065 cddf9ac9c0e90e9e5e082eed27937662 450 Gene3D G3DSA:3.90.1150.10 35 441 3.5E-150 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD13_04065 cddf9ac9c0e90e9e5e082eed27937662 450 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 259 296 - T 17-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BJD13_04065 cddf9ac9c0e90e9e5e082eed27937662 450 Gene3D G3DSA:3.40.640.10 71 351 3.5E-150 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD13_04065 cddf9ac9c0e90e9e5e082eed27937662 450 SUPERFAMILY SSF53383 22 448 2.36E-121 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD13_04065 cddf9ac9c0e90e9e5e082eed27937662 450 Pfam PF00202 Aminotransferase class-III 37 445 3.1E-90 T 17-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BJD13_15955 cc105a39057ffba85c44c4df02eb030c 144 Pfam PF00581 Rhodanese-like domain 44 135 6.7E-18 T 17-10-2018 IPR001763 Rhodanese-like domain BJD13_15955 cc105a39057ffba85c44c4df02eb030c 144 SMART SM00450 42 139 8.2E-24 T 17-10-2018 IPR001763 Rhodanese-like domain BJD13_15955 cc105a39057ffba85c44c4df02eb030c 144 Gene3D G3DSA:3.40.250.10 40 144 5.1E-26 T 17-10-2018 IPR036873 Rhodanese-like domain superfamily BJD13_15955 cc105a39057ffba85c44c4df02eb030c 144 SUPERFAMILY SSF52821 23 143 1.7E-29 T 17-10-2018 IPR036873 Rhodanese-like domain superfamily BJD13_20920 1473ddbded269b68cf2e4013692a9e1d 140 SUPERFAMILY SSF46604 87 135 3.14E-10 T 17-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD13_20920 1473ddbded269b68cf2e4013692a9e1d 140 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 3 132 2.0E-42 T 17-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD13_20920 1473ddbded269b68cf2e4013692a9e1d 140 SUPERFAMILY SSF51344 3 85 7.32E-23 T 17-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD13_20920 1473ddbded269b68cf2e4013692a9e1d 140 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 88 131 2.5E-7 T 17-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain BJD13_20920 1473ddbded269b68cf2e4013692a9e1d 140 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 9 85 3.0E-37 T 17-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD13_20920 1473ddbded269b68cf2e4013692a9e1d 140 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 130 19.612 T 17-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD13_20920 1473ddbded269b68cf2e4013692a9e1d 140 Gene3D G3DSA:2.60.15.10 1 139 9.6E-38 T 17-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD13_20920 1473ddbded269b68cf2e4013692a9e1d 140 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 5 83 1.4E-27 T 17-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD13_15365 664a84f86c71098a9902bf26787eabde 221 Hamap MF_02089 Epoxyqueuosine reductase QueH [queH]. 19 195 33.459 T 17-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 BJD13_15365 664a84f86c71098a9902bf26787eabde 221 Pfam PF02677 Uncharacterized BCR, COG1636 19 193 4.2E-64 T 17-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 BJD13_11615 728b9d0bb32d621a0e136330d99b34dc 248 Pfam PF02674 Colicin V production protein 2 140 1.0E-29 T 17-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 BJD13_09465 f54c089148da96f0175b2fa1f5a6d943 507 SUPERFAMILY SSF109604 4 269 1.49E-58 T 17-10-2018 BJD13_09465 f54c089148da96f0175b2fa1f5a6d943 507 Gene3D G3DSA:1.10.3210.10 10 263 1.1E-67 T 17-10-2018 BJD13_09465 f54c089148da96f0175b2fa1f5a6d943 507 SMART SM00267 317 493 4.8E-52 T 17-10-2018 IPR000160 GGDEF domain BJD13_09465 f54c089148da96f0175b2fa1f5a6d943 507 Gene3D G3DSA:3.30.70.270 313 496 5.9E-55 T 17-10-2018 BJD13_09465 f54c089148da96f0175b2fa1f5a6d943 507 SUPERFAMILY SSF55073 333 494 2.51E-46 T 17-10-2018 IPR029787 Nucleotide cyclase BJD13_09465 f54c089148da96f0175b2fa1f5a6d943 507 Pfam PF08668 HDOD domain 15 207 5.9E-57 T 17-10-2018 IPR013976 Metal-dependent hydrolase HDOD BJD13_09465 f54c089148da96f0175b2fa1f5a6d943 507 Pfam PF00990 Diguanylate cyclase, GGDEF domain 328 489 8.0E-43 T 17-10-2018 IPR000160 GGDEF domain BJD13_09465 f54c089148da96f0175b2fa1f5a6d943 507 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 324 492 3.5E-49 T 17-10-2018 IPR000160 GGDEF domain BJD13_20900 5b0c8cebb7925448876ee854c743855e 175 SUPERFAMILY SSF47928 3 103 9.55E-19 T 17-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD13_20900 5b0c8cebb7925448876ee854c743855e 175 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 173 2.9E-44 T 17-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD13_20900 5b0c8cebb7925448876ee854c743855e 175 PRINTS PR00125 ATP synthase delta subunit signature 133 148 2.7E-21 T 17-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD13_20900 5b0c8cebb7925448876ee854c743855e 175 PRINTS PR00125 ATP synthase delta subunit signature 7 26 2.7E-21 T 17-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD13_20900 5b0c8cebb7925448876ee854c743855e 175 PRINTS PR00125 ATP synthase delta subunit signature 83 97 2.7E-21 T 17-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD13_20900 5b0c8cebb7925448876ee854c743855e 175 PRINTS PR00125 ATP synthase delta subunit signature 72 83 2.7E-21 T 17-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD13_20900 5b0c8cebb7925448876ee854c743855e 175 PRINTS PR00125 ATP synthase delta subunit signature 148 166 2.7E-21 T 17-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD13_20900 5b0c8cebb7925448876ee854c743855e 175 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 8 173 8.2E-33 T 17-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD13_20900 5b0c8cebb7925448876ee854c743855e 175 Gene3D G3DSA:1.10.520.20 2 104 1.0E-21 T 17-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD13_20900 5b0c8cebb7925448876ee854c743855e 175 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 175 17.977 T 17-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BJD13_08745 0b09ba8b2892899cde5db114d993c6a9 276 Pfam PF00005 ABC transporter 45 201 1.1E-32 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD13_08745 0b09ba8b2892899cde5db114d993c6a9 276 Gene3D G3DSA:3.40.50.300 30 274 9.0E-67 T 17-10-2018 BJD13_08745 0b09ba8b2892899cde5db114d993c6a9 276 SUPERFAMILY SSF52540 31 263 3.11E-59 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_08745 0b09ba8b2892899cde5db114d993c6a9 276 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 30 276 7.5E-116 T 17-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 BJD13_08745 0b09ba8b2892899cde5db114d993c6a9 276 SMART SM00382 54 257 5.2E-14 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_08745 0b09ba8b2892899cde5db114d993c6a9 276 ProSitePatterns PS00211 ABC transporters family signature. 173 187 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD13_03885 ea6f14fc1fa4a743448947d78dd57b69 586 ProSitePatterns PS00592 Glycosyl hydrolases family 9 active sites signature 1. 496 512 - T 17-10-2018 IPR018221 Glycoside hydrolase family 9, His active site KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 BJD13_03885 ea6f14fc1fa4a743448947d78dd57b69 586 Gene3D G3DSA:2.60.40.10 27 126 4.4E-20 T 17-10-2018 IPR013783 Immunoglobulin-like fold BJD13_03885 ea6f14fc1fa4a743448947d78dd57b69 586 SUPERFAMILY SSF48208 128 581 3.32E-122 T 17-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 BJD13_03885 ea6f14fc1fa4a743448947d78dd57b69 586 Pfam PF02927 Cellulase N-terminal ig-like domain 34 117 1.7E-18 T 17-10-2018 IPR004197 Cellulase, Ig-like domain GO:0005975|GO:0008810 BJD13_03885 ea6f14fc1fa4a743448947d78dd57b69 586 SUPERFAMILY SSF81296 29 125 9.8E-20 T 17-10-2018 IPR014756 Immunoglobulin E-set BJD13_03885 ea6f14fc1fa4a743448947d78dd57b69 586 Pfam PF00759 Glycosyl hydrolase family 9 130 577 2.8E-92 T 17-10-2018 IPR001701 Glycoside hydrolase family 9 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 BJD13_03885 ea6f14fc1fa4a743448947d78dd57b69 586 Gene3D G3DSA:1.50.10.10 128 585 8.4E-153 T 17-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 BJD13_03885 ea6f14fc1fa4a743448947d78dd57b69 586 ProSitePatterns PS00698 Glycosyl hydrolases family 9 active sites signature 2. 554 572 - T 17-10-2018 IPR033126 Glycosyl hydrolases family 9, Asp/Glu active sites KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 BJD13_04135 9bd016ab55f83d998a99b7d14d7be668 371 Gene3D G3DSA:3.40.190.10 138 365 1.3E-134 T 17-10-2018 BJD13_04135 9bd016ab55f83d998a99b7d14d7be668 371 Pfam PF13416 Bacterial extracellular solute-binding protein 51 332 1.0E-35 T 17-10-2018 IPR006059 Bacterial extracellular solute-binding protein BJD13_04135 9bd016ab55f83d998a99b7d14d7be668 371 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 80 94 8.2E-56 T 17-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BJD13_04135 9bd016ab55f83d998a99b7d14d7be668 371 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 183 202 8.2E-56 T 17-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BJD13_04135 9bd016ab55f83d998a99b7d14d7be668 371 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 220 239 8.2E-56 T 17-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BJD13_04135 9bd016ab55f83d998a99b7d14d7be668 371 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 315 341 8.2E-56 T 17-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BJD13_04135 9bd016ab55f83d998a99b7d14d7be668 371 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 160 174 8.2E-56 T 17-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BJD13_04135 9bd016ab55f83d998a99b7d14d7be668 371 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 37 53 8.2E-56 T 17-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BJD13_04135 9bd016ab55f83d998a99b7d14d7be668 371 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 53 74 8.2E-56 T 17-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BJD13_04135 9bd016ab55f83d998a99b7d14d7be668 371 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 96 109 8.2E-56 T 17-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BJD13_04135 9bd016ab55f83d998a99b7d14d7be668 371 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 270 289 8.2E-56 T 17-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BJD13_04135 9bd016ab55f83d998a99b7d14d7be668 371 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 129 145 8.2E-56 T 17-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BJD13_04135 9bd016ab55f83d998a99b7d14d7be668 371 SUPERFAMILY SSF53850 32 370 4.3E-99 T 17-10-2018 BJD13_04135 9bd016ab55f83d998a99b7d14d7be668 371 PIRSF PIRSF019574 1 371 8.6E-136 T 17-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BJD13_04135 9bd016ab55f83d998a99b7d14d7be668 371 Gene3D G3DSA:3.40.190.10 34 339 1.3E-134 T 17-10-2018 BJD13_10385 5c9d0a76c601516a1d76e161ba792704 89 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 89 4.0E-25 T 17-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_10385 5c9d0a76c601516a1d76e161ba792704 89 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.039 T 17-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_10385 5c9d0a76c601516a1d76e161ba792704 89 TIGRFAM TIGR00029 S20: ribosomal protein bS20 2 86 1.5E-28 T 17-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_10385 5c9d0a76c601516a1d76e161ba792704 89 Gene3D G3DSA:1.20.58.110 1 87 4.4E-27 T 17-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_10385 5c9d0a76c601516a1d76e161ba792704 89 SUPERFAMILY SSF46992 3 86 2.35E-29 T 17-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_10385 5c9d0a76c601516a1d76e161ba792704 89 Pfam PF01649 Ribosomal protein S20 2 84 1.0E-25 T 17-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_07210 675c3ec76fe65273769cf0858252414a 304 Gene3D G3DSA:3.30.70.120 232 303 2.9E-9 T 17-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BJD13_07210 675c3ec76fe65273769cf0858252414a 304 Pfam PF01634 ATP phosphoribosyltransferase 60 224 3.2E-44 T 17-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 BJD13_07210 675c3ec76fe65273769cf0858252414a 304 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 206 302 1.1E-17 T 17-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 BJD13_07210 675c3ec76fe65273769cf0858252414a 304 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 12 304 31.631 T 17-10-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 BJD13_07210 675c3ec76fe65273769cf0858252414a 304 Gene3D G3DSA:3.40.190.10 13 227 1.2E-65 T 17-10-2018 BJD13_07210 675c3ec76fe65273769cf0858252414a 304 Pfam PF08029 HisG, C-terminal domain 230 301 5.4E-8 T 17-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 BJD13_07210 675c3ec76fe65273769cf0858252414a 304 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 162 183 - T 17-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 BJD13_07210 675c3ec76fe65273769cf0858252414a 304 SUPERFAMILY SSF53850 12 228 1.02E-61 T 17-10-2018 BJD13_07210 675c3ec76fe65273769cf0858252414a 304 Gene3D G3DSA:3.40.190.10 109 198 1.2E-65 T 17-10-2018 BJD13_07210 675c3ec76fe65273769cf0858252414a 304 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 13 201 6.6E-54 T 17-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 BJD13_12865 0010e9ddebfa4e9c25aab2c773396993 347 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 17 315 5.3E-99 T 17-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 BJD13_12865 0010e9ddebfa4e9c25aab2c773396993 347 SUPERFAMILY SSF81799 123 222 1.31E-34 T 17-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 BJD13_12865 0010e9ddebfa4e9c25aab2c773396993 347 SUPERFAMILY SSF53335 18 316 7.27E-43 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_12865 0010e9ddebfa4e9c25aab2c773396993 347 Gene3D G3DSA:1.10.150.170 121 223 6.9E-99 T 17-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 BJD13_12865 0010e9ddebfa4e9c25aab2c773396993 347 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 18 316 37.421 T 17-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 BJD13_12865 0010e9ddebfa4e9c25aab2c773396993 347 PIRSF PIRSF004486 12 317 8.9E-98 T 17-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 BJD13_12865 0010e9ddebfa4e9c25aab2c773396993 347 Gene3D G3DSA:3.40.50.150 21 315 6.9E-99 T 17-10-2018 BJD13_12865 0010e9ddebfa4e9c25aab2c773396993 347 Pfam PF01795 MraW methylase family 17 315 1.8E-99 T 17-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 BJD13_08320 eb51fdebc1116d5716df20834da0c319 194 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 1 192 31.568 T 17-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 BJD13_08320 eb51fdebc1116d5716df20834da0c319 194 Pfam PF02525 Flavodoxin-like fold 1 183 1.3E-46 T 17-10-2018 IPR003680 Flavodoxin-like fold BJD13_08320 eb51fdebc1116d5716df20834da0c319 194 Gene3D G3DSA:3.40.50.360 1 186 4.5E-58 T 17-10-2018 IPR029039 Flavoprotein-like superfamily BJD13_08320 eb51fdebc1116d5716df20834da0c319 194 SUPERFAMILY SSF52218 1 182 3.69E-52 T 17-10-2018 IPR029039 Flavoprotein-like superfamily BJD13_19365 def15b491b7617aef875570da8909c1c 251 Gene3D G3DSA:3.40.50.720 2 236 5.7E-61 T 17-10-2018 BJD13_19365 def15b491b7617aef875570da8909c1c 251 Pfam PF00106 short chain dehydrogenase 3 187 3.6E-51 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_19365 def15b491b7617aef875570da8909c1c 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 4.9E-9 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_19365 def15b491b7617aef875570da8909c1c 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 4.9E-9 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_19365 def15b491b7617aef875570da8909c1c 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 4.9E-9 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_19365 def15b491b7617aef875570da8909c1c 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 136 164 - T 17-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BJD13_19365 def15b491b7617aef875570da8909c1c 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 8.2E-23 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_19365 def15b491b7617aef875570da8909c1c 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 8.2E-23 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_19365 def15b491b7617aef875570da8909c1c 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 8.2E-23 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_19365 def15b491b7617aef875570da8909c1c 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 8.2E-23 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_19365 def15b491b7617aef875570da8909c1c 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 8.2E-23 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_19365 def15b491b7617aef875570da8909c1c 251 SUPERFAMILY SSF51735 3 227 4.38E-59 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_11860 d2628c0da5fd669258e699524027c905 180 SUPERFAMILY SSF55282 4 180 7.06E-77 T 17-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_11860 d2628c0da5fd669258e699524027c905 180 Pfam PF00281 Ribosomal protein L5 25 81 1.2E-27 T 17-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_11860 d2628c0da5fd669258e699524027c905 180 ProSitePatterns PS00358 Ribosomal protein L5 signature. 58 74 - T 17-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_11860 d2628c0da5fd669258e699524027c905 180 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 2 180 43.215 T 17-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_11860 d2628c0da5fd669258e699524027c905 180 PIRSF PIRSF002161 1 180 1.0E-65 T 17-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_11860 d2628c0da5fd669258e699524027c905 180 Gene3D G3DSA:3.30.1440.10 1 180 2.5E-77 T 17-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_11860 d2628c0da5fd669258e699524027c905 180 Pfam PF00673 ribosomal L5P family C-terminus 85 178 9.4E-40 T 17-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_20180 24a7c8c952adb92a493e01dee0954732 139 Pfam PF06891 P2 phage tail completion protein R (GpR) 1 130 1.9E-44 T 17-10-2018 IPR009678 Bacteriophage tail completion protein R BJD13_22145 af4e5be99a69b2dc423846ebc2ebac35 115 Pfam PF07238 PilZ domain 6 109 2.0E-7 T 17-10-2018 IPR009875 PilZ domain GO:0035438 BJD13_11140 2e50800e041c3f1ac6034aab44e4521f 318 Pfam PF01882 Protein of unknown function DUF58 211 288 7.2E-15 T 17-10-2018 IPR002881 Domain of unknown function DUF58 BJD13_08875 2feffee45ca0c7e239d8c28d57395175 323 Gene3D G3DSA:3.10.50.40 212 321 3.7E-39 T 17-10-2018 BJD13_08875 2feffee45ca0c7e239d8c28d57395175 323 SUPERFAMILY SSF54534 157 322 2.36E-50 T 17-10-2018 BJD13_08875 2feffee45ca0c7e239d8c28d57395175 323 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 232 318 1.7E-25 T 17-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain BJD13_08875 2feffee45ca0c7e239d8c28d57395175 323 Gene3D G3DSA:1.10.287.460 38 125 3.4E-12 T 17-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 BJD13_08875 2feffee45ca0c7e239d8c28d57395175 323 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 40 113 3.8E-9 T 17-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 BJD13_08875 2feffee45ca0c7e239d8c28d57395175 323 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 131 223 9.0E-20 T 17-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 BJD13_08875 2feffee45ca0c7e239d8c28d57395175 323 Gene3D G3DSA:1.10.287.460 130 211 4.0E-13 T 17-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 BJD13_07075 bddb0ee3638afdfc4a348959d4c8c0fc 619 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 31 49 3.3E-5 T 17-10-2018 IPR006073 GTP binding domain GO:0005525 BJD13_07075 bddb0ee3638afdfc4a348959d4c8c0fc 619 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 10 30 3.3E-5 T 17-10-2018 IPR006073 GTP binding domain GO:0005525 BJD13_07075 bddb0ee3638afdfc4a348959d4c8c0fc 619 Pfam PF07670 Nucleoside recognition 286 380 4.9E-13 T 17-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 BJD13_07075 bddb0ee3638afdfc4a348959d4c8c0fc 619 Pfam PF07670 Nucleoside recognition 455 588 2.3E-25 T 17-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 BJD13_07075 bddb0ee3638afdfc4a348959d4c8c0fc 619 Gene3D G3DSA:3.40.50.300 9 184 5.1E-41 T 17-10-2018 BJD13_07075 bddb0ee3638afdfc4a348959d4c8c0fc 619 Pfam PF07664 Ferrous iron transport protein B C terminus 398 450 1.8E-14 T 17-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 BJD13_07075 bddb0ee3638afdfc4a348959d4c8c0fc 619 Pfam PF02421 Ferrous iron transport protein B 9 167 3.7E-52 T 17-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 BJD13_07075 bddb0ee3638afdfc4a348959d4c8c0fc 619 SUPERFAMILY SSF52540 8 172 1.08E-33 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_02545 8111b2ce25ac68e47c3ca4dde62b972e 632 Gene3D G3DSA:3.40.50.300 218 433 6.6E-52 T 17-10-2018 BJD13_02545 8111b2ce25ac68e47c3ca4dde62b972e 632 Gene3D G3DSA:3.30.70.330 513 585 3.6E-14 T 17-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily BJD13_02545 8111b2ce25ac68e47c3ca4dde62b972e 632 SUPERFAMILY SSF52540 78 364 2.32E-75 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_02545 8111b2ce25ac68e47c3ca4dde62b972e 632 Pfam PF03880 DbpA RNA binding domain 513 582 5.5E-23 T 17-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain BJD13_02545 8111b2ce25ac68e47c3ca4dde62b972e 632 Gene3D G3DSA:3.40.50.300 9 215 2.9E-76 T 17-10-2018 BJD13_02545 8111b2ce25ac68e47c3ca4dde62b972e 632 Pfam PF00271 Helicase conserved C-terminal domain 235 343 2.7E-28 T 17-10-2018 IPR001650 Helicase, C-terminal BJD13_02545 8111b2ce25ac68e47c3ca4dde62b972e 632 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 4 584 47.664 T 17-10-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 BJD13_02545 8111b2ce25ac68e47c3ca4dde62b972e 632 Pfam PF00270 DEAD/DEAH box helicase 34 197 2.2E-51 T 17-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BJD13_02545 8111b2ce25ac68e47c3ca4dde62b972e 632 SMART SM00487 28 226 4.7E-64 T 17-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BJD13_02545 8111b2ce25ac68e47c3ca4dde62b972e 632 SMART SM00490 262 343 1.6E-32 T 17-10-2018 IPR001650 Helicase, C-terminal BJD13_02545 8111b2ce25ac68e47c3ca4dde62b972e 632 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 157 165 - T 17-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site BJD13_15355 d53d12c9a7ee85243be0bbd2e4b38758 195 Gene3D G3DSA:3.40.50.360 5 181 2.6E-41 T 17-10-2018 IPR029039 Flavoprotein-like superfamily BJD13_15355 d53d12c9a7ee85243be0bbd2e4b38758 195 SUPERFAMILY SSF52218 4 187 4.84E-32 T 17-10-2018 IPR029039 Flavoprotein-like superfamily BJD13_15355 d53d12c9a7ee85243be0bbd2e4b38758 195 TIGRFAM TIGR03566 FMN_reduc_MsuE: FMN reductase 8 179 3.8E-75 T 17-10-2018 IPR019912 FMN reductase, MsuE-like BJD13_15355 d53d12c9a7ee85243be0bbd2e4b38758 195 Pfam PF03358 NADPH-dependent FMN reductase 8 151 7.0E-28 T 17-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 BJD13_13620 6bace7af5e4764ea5499a9b4237ac7b5 222 Pfam PF02230 Phospholipase/Carboxylesterase 14 216 1.4E-45 T 17-10-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 BJD13_13620 6bace7af5e4764ea5499a9b4237ac7b5 222 Gene3D G3DSA:3.40.50.1820 3 218 6.9E-64 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_13620 6bace7af5e4764ea5499a9b4237ac7b5 222 SUPERFAMILY SSF53474 9 218 2.33E-49 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_12040 7523608086326f52fa1046acfa0675f2 319 Gene3D G3DSA:3.40.50.2020 151 294 8.1E-128 T 17-10-2018 BJD13_12040 7523608086326f52fa1046acfa0675f2 319 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 7 318 48.503 T 17-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 BJD13_12040 7523608086326f52fa1046acfa0675f2 319 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 132 147 - T 17-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 BJD13_12040 7523608086326f52fa1046acfa0675f2 319 SUPERFAMILY SSF53271 72 307 6.04E-61 T 17-10-2018 IPR029057 Phosphoribosyltransferase-like BJD13_12040 7523608086326f52fa1046acfa0675f2 319 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 9 317 7.0E-116 T 17-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 BJD13_12040 7523608086326f52fa1046acfa0675f2 319 Pfam PF14572 Phosphoribosyl synthetase-associated domain 208 317 1.5E-30 T 17-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 BJD13_12040 7523608086326f52fa1046acfa0675f2 319 Gene3D G3DSA:3.40.50.2020 10 306 8.1E-128 T 17-10-2018 BJD13_12040 7523608086326f52fa1046acfa0675f2 319 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 8 123 3.7E-46 T 17-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 BJD13_12040 7523608086326f52fa1046acfa0675f2 319 SMART SM01400 7 124 4.3E-68 T 17-10-2018 BJD13_19595 788b6add71fcd77f3ce7bbe37986bbb1 353 Gene3D G3DSA:3.30.420.40 133 297 1.5E-125 T 17-10-2018 BJD13_19595 788b6add71fcd77f3ce7bbe37986bbb1 353 ProSitePatterns PS01016 Glycoprotease family signature. 100 120 - T 17-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 BJD13_19595 788b6add71fcd77f3ce7bbe37986bbb1 353 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 335 64.125 T 17-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 BJD13_19595 788b6add71fcd77f3ce7bbe37986bbb1 353 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 135 147 3.5E-52 T 17-10-2018 IPR017861 Kae1/TsaD family BJD13_19595 788b6add71fcd77f3ce7bbe37986bbb1 353 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 3.5E-52 T 17-10-2018 IPR017861 Kae1/TsaD family BJD13_19595 788b6add71fcd77f3ce7bbe37986bbb1 353 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 101 120 3.5E-52 T 17-10-2018 IPR017861 Kae1/TsaD family BJD13_19595 788b6add71fcd77f3ce7bbe37986bbb1 353 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 267 276 3.5E-52 T 17-10-2018 IPR017861 Kae1/TsaD family BJD13_19595 788b6add71fcd77f3ce7bbe37986bbb1 353 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 158 179 3.5E-52 T 17-10-2018 IPR017861 Kae1/TsaD family BJD13_19595 788b6add71fcd77f3ce7bbe37986bbb1 353 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 80 100 3.5E-52 T 17-10-2018 IPR017861 Kae1/TsaD family BJD13_19595 788b6add71fcd77f3ce7bbe37986bbb1 353 SUPERFAMILY SSF53067 3 127 3.11E-30 T 17-10-2018 BJD13_19595 788b6add71fcd77f3ce7bbe37986bbb1 353 SUPERFAMILY SSF53067 105 313 3.37E-41 T 17-10-2018 BJD13_19595 788b6add71fcd77f3ce7bbe37986bbb1 353 Pfam PF00814 Glycoprotease family 29 311 1.2E-100 T 17-10-2018 IPR000905 Gcp-like domain BJD13_19595 788b6add71fcd77f3ce7bbe37986bbb1 353 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 310 9.8E-114 T 17-10-2018 IPR017861 Kae1/TsaD family BJD13_19595 788b6add71fcd77f3ce7bbe37986bbb1 353 Gene3D G3DSA:3.30.420.40 3 319 1.5E-125 T 17-10-2018 BJD13_19595 788b6add71fcd77f3ce7bbe37986bbb1 353 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 317 7.2E-131 T 17-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 BJD13_18805 d490ab1bfdff48f622d3a1182b675a15 521 Pfam PF04820 Tryptophan halogenase 16 465 2.3E-189 T 17-10-2018 IPR006905 Flavin-dependent halogenase BJD13_18805 d490ab1bfdff48f622d3a1182b675a15 521 Gene3D G3DSA:3.50.50.60 14 497 5.5E-179 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_18805 d490ab1bfdff48f622d3a1182b675a15 521 SUPERFAMILY SSF51905 15 425 1.3E-31 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_18805 d490ab1bfdff48f622d3a1182b675a15 521 PIRSF PIRSF011396 9 502 3.3E-185 T 17-10-2018 IPR033856 Flavin-dependent tryptophan halogenase BJD13_19630 ff7b014e585138f6ac9653f62936ad1c 438 Pfam PF13520 Amino acid permease 18 406 1.2E-48 T 17-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BJD13_19630 ff7b014e585138f6ac9653f62936ad1c 438 PIRSF PIRSF006060 1 436 8.2E-73 T 17-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BJD13_19630 ff7b014e585138f6ac9653f62936ad1c 438 Gene3D G3DSA:1.20.1740.10 14 437 6.9E-94 T 17-10-2018 BJD13_17710 89a8e4bb9d879ce7df01ad8fff3ec00e 345 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 203 225 2.0E-6 T 17-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) BJD13_17710 89a8e4bb9d879ce7df01ad8fff3ec00e 345 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 63 80 2.0E-6 T 17-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) BJD13_17710 89a8e4bb9d879ce7df01ad8fff3ec00e 345 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 272 289 2.0E-6 T 17-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) BJD13_17710 89a8e4bb9d879ce7df01ad8fff3ec00e 345 SUPERFAMILY SSF63829 33 337 7.85E-60 T 17-10-2018 BJD13_17710 89a8e4bb9d879ce7df01ad8fff3ec00e 345 Gene3D G3DSA:2.120.10.30 35 344 2.3E-99 T 17-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like BJD13_17710 89a8e4bb9d879ce7df01ad8fff3ec00e 345 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 62 328 3.7E-52 T 17-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region BJD13_09000 20aeab1a5d82496e89dd7db8e05c7eb8 467 Pfam PF02321 Outer membrane efflux protein 97 246 1.2E-9 T 17-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 BJD13_09000 20aeab1a5d82496e89dd7db8e05c7eb8 467 Pfam PF02321 Outer membrane efflux protein 283 457 7.5E-21 T 17-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 BJD13_09000 20aeab1a5d82496e89dd7db8e05c7eb8 467 SUPERFAMILY SSF56954 5 457 8.89E-46 T 17-10-2018 BJD13_09000 20aeab1a5d82496e89dd7db8e05c7eb8 467 Gene3D G3DSA:1.20.1600.10 14 462 2.1E-48 T 17-10-2018 BJD13_14225 00e5ebf36a41fcede8f76c1f1750a807 455 SMART SM00878 336 441 8.0E-69 T 17-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BJD13_14225 00e5ebf36a41fcede8f76c1f1750a807 455 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 17-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BJD13_14225 00e5ebf36a41fcede8f76c1f1750a807 455 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 4.6E-232 T 17-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 BJD13_14225 00e5ebf36a41fcede8f76c1f1750a807 455 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 17-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BJD13_14225 00e5ebf36a41fcede8f76c1f1750a807 455 SUPERFAMILY SSF51246 331 444 8.89E-45 T 17-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 BJD13_14225 00e5ebf36a41fcede8f76c1f1750a807 455 Gene3D G3DSA:3.30.1490.20 131 203 6.3E-155 T 17-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BJD13_14225 00e5ebf36a41fcede8f76c1f1750a807 455 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 2.8E-44 T 17-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BJD13_14225 00e5ebf36a41fcede8f76c1f1750a807 455 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 2.1E-40 T 17-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BJD13_14225 00e5ebf36a41fcede8f76c1f1750a807 455 SUPERFAMILY SSF52440 1 113 5.11E-47 T 17-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BJD13_14225 00e5ebf36a41fcede8f76c1f1750a807 455 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 323 8.0E-82 T 17-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BJD13_14225 00e5ebf36a41fcede8f76c1f1750a807 455 Gene3D G3DSA:3.30.470.20 86 433 6.3E-155 T 17-10-2018 BJD13_14225 00e5ebf36a41fcede8f76c1f1750a807 455 Gene3D G3DSA:3.40.50.20 1 85 2.1E-34 T 17-10-2018 BJD13_14225 00e5ebf36a41fcede8f76c1f1750a807 455 SUPERFAMILY SSF56059 83 344 2.3E-67 T 17-10-2018 BJD13_11345 180da230fafecd360ab236624ad82cf5 126 SUPERFAMILY SSF54427 9 119 2.54E-15 T 17-10-2018 IPR032710 NTF2-like domain superfamily BJD13_11345 180da230fafecd360ab236624ad82cf5 126 Gene3D G3DSA:3.10.450.50 2 119 6.6E-15 T 17-10-2018 BJD13_11345 180da230fafecd360ab236624ad82cf5 126 Pfam PF14534 Domain of unknown function (DUF4440) 11 112 7.2E-16 T 17-10-2018 IPR027843 Domain of unknown function DUF4440 BJD13_14630 3237006e9a19570e49d668575b2ff608 506 Gene3D G3DSA:1.20.1250.20 20 506 7.3E-119 T 17-10-2018 BJD13_14630 3237006e9a19570e49d668575b2ff608 506 Pfam PF00854 POT family 103 462 1.4E-60 T 17-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 BJD13_14630 3237006e9a19570e49d668575b2ff608 506 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 164 176 - T 17-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 BJD13_14630 3237006e9a19570e49d668575b2ff608 506 SUPERFAMILY SSF103473 10 501 4.05E-28 T 17-10-2018 IPR036259 MFS transporter superfamily BJD13_14630 3237006e9a19570e49d668575b2ff608 506 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 25 502 2.9E-105 T 17-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 BJD13_00505 e9b84754a895daec320666da5c37d90a 1065 Gene3D G3DSA:3.30.70.1430 570 674 3.5E-299 T 17-10-2018 BJD13_00505 e9b84754a895daec320666da5c37d90a 1065 Gene3D G3DSA:1.20.1640.10 515 1044 3.5E-299 T 17-10-2018 BJD13_00505 e9b84754a895daec320666da5c37d90a 1065 Gene3D G3DSA:3.30.2090.10 189 280 3.5E-299 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_00505 e9b84754a895daec320666da5c37d90a 1065 Gene3D G3DSA:3.30.2090.10 726 831 3.5E-299 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_00505 e9b84754a895daec320666da5c37d90a 1065 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1052 0.0 T 17-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 BJD13_00505 e9b84754a895daec320666da5c37d90a 1065 Gene3D G3DSA:3.30.70.1320 135 333 3.5E-299 T 17-10-2018 BJD13_00505 e9b84754a895daec320666da5c37d90a 1065 SUPERFAMILY SSF82714 192 274 2.22E-17 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_00505 e9b84754a895daec320666da5c37d90a 1065 SUPERFAMILY SSF82714 725 827 4.19E-14 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_00505 e9b84754a895daec320666da5c37d90a 1065 Gene3D G3DSA:1.20.1640.10 15 514 3.5E-299 T 17-10-2018 BJD13_00505 e9b84754a895daec320666da5c37d90a 1065 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 5.5E-22 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_00505 e9b84754a895daec320666da5c37d90a 1065 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 5.5E-22 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_00505 e9b84754a895daec320666da5c37d90a 1065 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 5.5E-22 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_00505 e9b84754a895daec320666da5c37d90a 1065 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 5.5E-22 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_00505 e9b84754a895daec320666da5c37d90a 1065 PRINTS PR00702 Acriflavin resistance protein family signature 480 503 5.5E-22 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_00505 e9b84754a895daec320666da5c37d90a 1065 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 5.5E-22 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_00505 e9b84754a895daec320666da5c37d90a 1065 SUPERFAMILY SSF82693 567 668 7.32E-8 T 17-10-2018 BJD13_00505 e9b84754a895daec320666da5c37d90a 1065 SUPERFAMILY SSF82866 299 508 1.07E-33 T 17-10-2018 BJD13_00505 e9b84754a895daec320666da5c37d90a 1065 SUPERFAMILY SSF82866 826 1051 4.45E-54 T 17-10-2018 BJD13_00505 e9b84754a895daec320666da5c37d90a 1065 SUPERFAMILY SSF82693 156 333 4.19E-19 T 17-10-2018 BJD13_00505 e9b84754a895daec320666da5c37d90a 1065 Gene3D G3DSA:3.30.70.1430 42 839 3.5E-299 T 17-10-2018 BJD13_00505 e9b84754a895daec320666da5c37d90a 1065 SUPERFAMILY SSF82693 42 127 5.13E-23 T 17-10-2018 BJD13_00505 e9b84754a895daec320666da5c37d90a 1065 Gene3D G3DSA:3.30.70.1440 675 889 3.5E-299 T 17-10-2018 BJD13_00505 e9b84754a895daec320666da5c37d90a 1065 Pfam PF00873 AcrB/AcrD/AcrF family 6 1048 0.0 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_12995 acecba1d48b346a6bdd89bb0fa0c0034 200 Pfam PF00677 Lumazine binding domain 3 87 4.1E-20 T 17-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BJD13_12995 acecba1d48b346a6bdd89bb0fa0c0034 200 Pfam PF00677 Lumazine binding domain 100 184 7.6E-25 T 17-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BJD13_12995 acecba1d48b346a6bdd89bb0fa0c0034 200 Gene3D G3DSA:2.40.30.20 102 199 3.9E-34 T 17-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BJD13_12995 acecba1d48b346a6bdd89bb0fa0c0034 200 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 194 2.0E-60 T 17-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BJD13_12995 acecba1d48b346a6bdd89bb0fa0c0034 200 SUPERFAMILY SSF63380 1 93 1.79E-23 T 17-10-2018 IPR017938 Riboflavin synthase-like beta-barrel BJD13_12995 acecba1d48b346a6bdd89bb0fa0c0034 200 Gene3D G3DSA:2.40.30.20 1 89 5.4E-26 T 17-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BJD13_12995 acecba1d48b346a6bdd89bb0fa0c0034 200 SUPERFAMILY SSF63380 93 195 1.87E-32 T 17-10-2018 IPR017938 Riboflavin synthase-like beta-barrel BJD13_12995 acecba1d48b346a6bdd89bb0fa0c0034 200 PIRSF PIRSF000498 1 200 5.4E-75 T 17-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BJD13_02445 72687185e4843d769d754fdc3437cf26 606 Gene3D G3DSA:2.60.120.260 480 606 1.3E-24 T 17-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD13_02445 72687185e4843d769d754fdc3437cf26 606 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 137 147 - T 17-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site BJD13_02445 72687185e4843d769d754fdc3437cf26 606 PRINTS PR00723 Subtilisin serine protease family (S8) signature 390 406 3.5E-17 T 17-10-2018 IPR015500 Peptidase S8, subtilisin-related BJD13_02445 72687185e4843d769d754fdc3437cf26 606 PRINTS PR00723 Subtilisin serine protease family (S8) signature 133 146 3.5E-17 T 17-10-2018 IPR015500 Peptidase S8, subtilisin-related BJD13_02445 72687185e4843d769d754fdc3437cf26 606 PRINTS PR00723 Subtilisin serine protease family (S8) signature 88 107 3.5E-17 T 17-10-2018 IPR015500 Peptidase S8, subtilisin-related BJD13_02445 72687185e4843d769d754fdc3437cf26 606 SUPERFAMILY SSF52743 47 476 1.13E-69 T 17-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BJD13_02445 72687185e4843d769d754fdc3437cf26 606 Pfam PF01483 Proprotein convertase P-domain 517 602 8.3E-15 T 17-10-2018 IPR002884 P domain GO:0004252|GO:0006508 BJD13_02445 72687185e4843d769d754fdc3437cf26 606 Gene3D G3DSA:3.40.50.200 40 478 2.3E-102 T 17-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BJD13_02445 72687185e4843d769d754fdc3437cf26 606 SUPERFAMILY SSF49785 507 606 3.95E-16 T 17-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD13_02445 72687185e4843d769d754fdc3437cf26 606 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 391 401 - T 17-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site BJD13_02445 72687185e4843d769d754fdc3437cf26 606 Pfam PF00082 Subtilase family 88 306 4.2E-19 T 17-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 BJD13_02445 72687185e4843d769d754fdc3437cf26 606 Pfam PF00082 Subtilase family 373 463 4.0E-11 T 17-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 BJD13_05085 efb44b50738ec654196464937bef7418 144 Pfam PF07681 DoxX 15 110 5.4E-17 T 17-10-2018 IPR032808 DoxX family BJD13_23365 af9449b203f858f1218f1e24f4da2b5f 239 Pfam PF00814 Glycoprotease family 28 220 1.5E-30 T 17-10-2018 IPR000905 Gcp-like domain BJD13_23365 af9449b203f858f1218f1e24f4da2b5f 239 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 216 2.3E-58 T 17-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 BJD13_23365 af9449b203f858f1218f1e24f4da2b5f 239 SUPERFAMILY SSF53067 1 101 1.25E-28 T 17-10-2018 BJD13_23365 af9449b203f858f1218f1e24f4da2b5f 239 SUPERFAMILY SSF53067 106 214 2.98E-21 T 17-10-2018 BJD13_23365 af9449b203f858f1218f1e24f4da2b5f 239 Gene3D G3DSA:3.30.420.40 94 185 7.8E-69 T 17-10-2018 BJD13_23365 af9449b203f858f1218f1e24f4da2b5f 239 Gene3D G3DSA:3.30.420.40 3 216 7.8E-69 T 17-10-2018 BJD13_14485 5a2f0abb0393fd08b4d404ded3bf4414 192 SUPERFAMILY SSF52317 1 191 2.19E-54 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD13_14485 5a2f0abb0393fd08b4d404ded3bf4414 192 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 192 1.8E-79 T 17-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BJD13_14485 5a2f0abb0393fd08b4d404ded3bf4414 192 Pfam PF00117 Glutamine amidotransferase class-I 4 190 1.2E-54 T 17-10-2018 IPR017926 Glutamine amidotransferase BJD13_14485 5a2f0abb0393fd08b4d404ded3bf4414 192 Gene3D G3DSA:3.40.50.880 1 192 1.8E-62 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD13_14485 5a2f0abb0393fd08b4d404ded3bf4414 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 4.5E-5 T 17-10-2018 BJD13_14485 5a2f0abb0393fd08b4d404ded3bf4414 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 4.5E-5 T 17-10-2018 BJD13_14485 5a2f0abb0393fd08b4d404ded3bf4414 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 7.4E-14 T 17-10-2018 BJD13_14485 5a2f0abb0393fd08b4d404ded3bf4414 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 7.4E-14 T 17-10-2018 BJD13_14485 5a2f0abb0393fd08b4d404ded3bf4414 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 7.4E-14 T 17-10-2018 BJD13_14485 5a2f0abb0393fd08b4d404ded3bf4414 192 PRINTS PR00097 Anthranilate synthase component II signature 2 16 4.0E-36 T 17-10-2018 BJD13_14485 5a2f0abb0393fd08b4d404ded3bf4414 192 PRINTS PR00097 Anthranilate synthase component II signature 169 182 4.0E-36 T 17-10-2018 BJD13_14485 5a2f0abb0393fd08b4d404ded3bf4414 192 PRINTS PR00097 Anthranilate synthase component II signature 47 56 4.0E-36 T 17-10-2018 BJD13_14485 5a2f0abb0393fd08b4d404ded3bf4414 192 PRINTS PR00097 Anthranilate synthase component II signature 119 131 4.0E-36 T 17-10-2018 BJD13_14485 5a2f0abb0393fd08b4d404ded3bf4414 192 PRINTS PR00097 Anthranilate synthase component II signature 99 107 4.0E-36 T 17-10-2018 BJD13_14485 5a2f0abb0393fd08b4d404ded3bf4414 192 PRINTS PR00097 Anthranilate synthase component II signature 74 85 4.0E-36 T 17-10-2018 BJD13_16515 ecc0714b1bfeb4d6626148e186624c0d 544 Gene3D G3DSA:3.30.2290.10 31 234 6.7E-16 T 17-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal BJD13_16515 ecc0714b1bfeb4d6626148e186624c0d 544 SUPERFAMILY SSF111283 42 536 9.94E-91 T 17-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 BJD13_16515 ecc0714b1bfeb4d6626148e186624c0d 544 Pfam PF01523 Putative modulator of DNA gyrase 59 385 3.1E-57 T 17-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 BJD13_01160 b60669217160f61653244f4a076abc8c 177 Gene3D G3DSA:1.20.1290.10 14 175 7.7E-40 T 17-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 BJD13_01160 b60669217160f61653244f4a076abc8c 177 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 57 103 1.4E-12 T 17-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 BJD13_01160 b60669217160f61653244f4a076abc8c 177 SUPERFAMILY SSF69118 1 175 1.7E-46 T 17-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 BJD13_01160 b60669217160f61653244f4a076abc8c 177 Pfam PF02627 Carboxymuconolactone decarboxylase family 42 121 2.6E-14 T 17-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 BJD13_19125 07d9b8ada4459cbfc11eb38babadc2e1 171 SUPERFAMILY SSF88659 97 156 5.23E-16 T 17-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BJD13_19125 07d9b8ada4459cbfc11eb38babadc2e1 171 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 8 154 2.3E-21 T 17-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BJD13_19125 07d9b8ada4459cbfc11eb38babadc2e1 171 ProSitePatterns PS00622 LuxR-type HTH domain signature. 125 152 - T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_19125 07d9b8ada4459cbfc11eb38babadc2e1 171 Pfam PF04542 Sigma-70 region 2 10 75 2.4E-10 T 17-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BJD13_19125 07d9b8ada4459cbfc11eb38babadc2e1 171 Gene3D G3DSA:1.10.1740.10 4 67 6.8E-18 T 17-10-2018 BJD13_19125 07d9b8ada4459cbfc11eb38babadc2e1 171 SUPERFAMILY SSF88946 9 86 4.71E-14 T 17-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BJD13_19125 07d9b8ada4459cbfc11eb38babadc2e1 171 Gene3D G3DSA:1.10.10.10 96 159 1.5E-19 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_19125 07d9b8ada4459cbfc11eb38babadc2e1 171 Pfam PF08281 Sigma-70, region 4 102 153 2.7E-16 T 17-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BJD13_00155 a111e3cda01f083ea5f38889c9253993 987 Pfam PF13700 Domain of unknown function (DUF4158) 3 163 1.2E-35 T 17-10-2018 IPR025296 Domain of unknown function DUF4158 BJD13_00155 a111e3cda01f083ea5f38889c9253993 987 Pfam PF01526 Tn3 transposase DDE domain 581 968 2.4E-145 T 17-10-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 BJD13_11265 007bb0aebf161be81458520ca9742e49 466 Gene3D G3DSA:1.10.150.130 80 212 3.2E-7 T 17-10-2018 IPR010998 Integrase/recombinase, N-terminal BJD13_11265 007bb0aebf161be81458520ca9742e49 466 Pfam PF00589 Phage integrase family 250 408 5.5E-11 T 17-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 BJD13_11265 007bb0aebf161be81458520ca9742e49 466 SUPERFAMILY SSF56349 86 408 7.95E-35 T 17-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BJD13_11265 007bb0aebf161be81458520ca9742e49 466 Gene3D G3DSA:1.10.443.10 232 438 6.6E-21 T 17-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 BJD13_10505 0eab2c782a5b20b7162a0161152f363f 393 Gene3D G3DSA:3.20.80.10 296 379 1.1E-5 T 17-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily BJD13_10505 0eab2c782a5b20b7162a0161152f363f 393 SUPERFAMILY SSF55961 26 181 1.65E-8 T 17-10-2018 BJD13_10505 0eab2c782a5b20b7162a0161152f363f 393 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 30 178 5.0E-6 T 17-10-2018 IPR019587 Polyketide cyclase/dehydrase BJD13_16020 8a0ad2ad64274593c8b0102913333a27 351 Gene3D G3DSA:3.30.450.20 8 78 3.4E-6 T 17-10-2018 BJD13_16020 8a0ad2ad64274593c8b0102913333a27 351 Gene3D G3DSA:3.30.565.10 187 339 6.8E-33 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_16020 8a0ad2ad64274593c8b0102913333a27 351 SUPERFAMILY SSF47384 119 182 4.51E-11 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD13_16020 8a0ad2ad64274593c8b0102913333a27 351 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 228 339 2.3E-16 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_16020 8a0ad2ad64274593c8b0102913333a27 351 Pfam PF00512 His Kinase A (phospho-acceptor) domain 123 182 9.0E-13 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_16020 8a0ad2ad64274593c8b0102913333a27 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 325 338 2.8E-8 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_16020 8a0ad2ad64274593c8b0102913333a27 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 302 320 2.8E-8 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_16020 8a0ad2ad64274593c8b0102913333a27 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 273 287 2.8E-8 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_16020 8a0ad2ad64274593c8b0102913333a27 351 Gene3D G3DSA:1.10.287.130 127 184 1.4E-12 T 17-10-2018 BJD13_16020 8a0ad2ad64274593c8b0102913333a27 351 SUPERFAMILY SSF55785 10 70 1.66E-7 T 17-10-2018 IPR035965 PAS domain superfamily BJD13_16020 8a0ad2ad64274593c8b0102913333a27 351 SUPERFAMILY SSF55874 192 338 3.67E-30 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_16020 8a0ad2ad64274593c8b0102913333a27 351 SMART SM00387 228 341 9.0E-28 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_16020 8a0ad2ad64274593c8b0102913333a27 351 SMART SM00388 122 189 4.5E-12 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_10275 5b8e183afe3386a2a3726f4350985412 291 SUPERFAMILY SSF55874 114 282 1.31E-44 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_10275 5b8e183afe3386a2a3726f4350985412 291 SMART SM00387 171 283 1.2E-32 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_10275 5b8e183afe3386a2a3726f4350985412 291 SMART SM00388 57 125 1.6E-18 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_10275 5b8e183afe3386a2a3726f4350985412 291 Pfam PF00512 His Kinase A (phospho-acceptor) domain 58 125 2.7E-15 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_10275 5b8e183afe3386a2a3726f4350985412 291 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 172 282 5.6E-25 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_10275 5b8e183afe3386a2a3726f4350985412 291 PRINTS PR00344 Bacterial sensor protein C-terminal signature 267 280 2.3E-17 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_10275 5b8e183afe3386a2a3726f4350985412 291 PRINTS PR00344 Bacterial sensor protein C-terminal signature 226 236 2.3E-17 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_10275 5b8e183afe3386a2a3726f4350985412 291 PRINTS PR00344 Bacterial sensor protein C-terminal signature 208 222 2.3E-17 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_10275 5b8e183afe3386a2a3726f4350985412 291 PRINTS PR00344 Bacterial sensor protein C-terminal signature 243 261 2.3E-17 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_10275 5b8e183afe3386a2a3726f4350985412 291 Gene3D G3DSA:3.30.565.10 124 287 3.9E-40 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_10275 5b8e183afe3386a2a3726f4350985412 291 Gene3D G3DSA:1.10.287.130 6 123 5.8E-22 T 17-10-2018 BJD13_10275 5b8e183afe3386a2a3726f4350985412 291 SUPERFAMILY SSF47384 40 126 2.16E-20 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD13_01445 9c12f18294bf1c7107d4eb0518133e8b 876 Pfam PF11843 Protein of unknown function (DUF3363) 464 852 1.5E-47 T 17-10-2018 IPR021795 Protein of unknown function DUF3363 BJD13_01445 9c12f18294bf1c7107d4eb0518133e8b 876 Pfam PF11843 Protein of unknown function (DUF3363) 192 518 4.1E-46 T 17-10-2018 IPR021795 Protein of unknown function DUF3363 BJD13_01445 9c12f18294bf1c7107d4eb0518133e8b 876 Pfam PF03432 Relaxase/Mobilisation nuclease domain 47 132 1.1E-5 T 17-10-2018 IPR005094 Endonuclease relaxase, MobA/VirD2 BJD13_22095 6d26b5d17a828d1786d0adee515fa062 215 SUPERFAMILY SSF75445 125 197 1.23E-22 T 17-10-2018 BJD13_22095 6d26b5d17a828d1786d0adee515fa062 215 Gene3D G3DSA:3.30.70.260 123 195 4.6E-77 T 17-10-2018 BJD13_22095 6d26b5d17a828d1786d0adee515fa062 215 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 47 210 1.5E-57 T 17-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 BJD13_22095 6d26b5d17a828d1786d0adee515fa062 215 SUPERFAMILY SSF100950 2 144 2.76E-47 T 17-10-2018 IPR037171 NagB/RpiA transferase-like BJD13_22095 6d26b5d17a828d1786d0adee515fa062 215 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 5 209 3.6E-67 T 17-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 BJD13_22095 6d26b5d17a828d1786d0adee515fa062 215 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 1 215 33.733 T 17-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 BJD13_22095 6d26b5d17a828d1786d0adee515fa062 215 Gene3D G3DSA:3.40.50.1360 5 206 4.6E-77 T 17-10-2018 BJD13_06565 2f1ef23ee5503bf878ae124c1e9a873c 123 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 3 123 16.615 T 17-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 BJD13_06565 2f1ef23ee5503bf878ae124c1e9a873c 123 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 48 121 3.0E-17 T 17-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 BJD13_06565 2f1ef23ee5503bf878ae124c1e9a873c 123 Pfam PF02049 Flagellar hook-basal body complex protein FliE 41 122 3.0E-28 T 17-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 BJD13_06565 2f1ef23ee5503bf878ae124c1e9a873c 123 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 52 68 2.5E-11 T 17-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 BJD13_06565 2f1ef23ee5503bf878ae124c1e9a873c 123 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 87 103 2.5E-11 T 17-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 BJD13_06565 2f1ef23ee5503bf878ae124c1e9a873c 123 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 108 121 2.5E-11 T 17-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 BJD13_23970 549fcad7da2979732fbdc1e027096db5 377 Pfam PF03743 Bacterial conjugation TrbI-like protein 191 368 1.8E-55 T 17-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI BJD13_23970 549fcad7da2979732fbdc1e027096db5 377 Gene3D G3DSA:2.40.128.260 183 308 4.3E-45 T 17-10-2018 BJD13_23970 549fcad7da2979732fbdc1e027096db5 377 Gene3D G3DSA:2.40.128.260 309 377 7.0E-12 T 17-10-2018 BJD13_17140 a1744b07ad30db6b490693fa18bd68ae 183 PIRSF PIRSF000303 1 183 4.1E-60 T 17-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 BJD13_17140 a1744b07ad30db6b490693fa18bd68ae 183 PRINTS PR01011 Glutathione peroxidase family signature 58 74 5.6E-19 T 17-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 BJD13_17140 a1744b07ad30db6b490693fa18bd68ae 183 PRINTS PR01011 Glutathione peroxidase family signature 141 150 5.6E-19 T 17-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 BJD13_17140 a1744b07ad30db6b490693fa18bd68ae 183 PRINTS PR01011 Glutathione peroxidase family signature 23 40 5.6E-19 T 17-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 BJD13_17140 a1744b07ad30db6b490693fa18bd68ae 183 SUPERFAMILY SSF52833 3 179 1.98E-56 T 17-10-2018 IPR036249 Thioredoxin-like superfamily BJD13_17140 a1744b07ad30db6b490693fa18bd68ae 183 Gene3D G3DSA:3.40.30.10 1 183 2.1E-58 T 17-10-2018 BJD13_17140 a1744b07ad30db6b490693fa18bd68ae 183 Pfam PF00255 Glutathione peroxidase 5 111 2.1E-36 T 17-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 BJD13_17140 a1744b07ad30db6b490693fa18bd68ae 183 ProSitePatterns PS00460 Glutathione peroxidases active site. 25 40 - T 17-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 BJD13_02600 f143f81618674651de5e35f671107a1d 229 SUPERFAMILY SSF52172 1 126 7.68E-40 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_02600 f143f81618674651de5e35f671107a1d 229 SUPERFAMILY SSF46894 128 228 1.96E-19 T 17-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BJD13_02600 f143f81618674651de5e35f671107a1d 229 Gene3D G3DSA:1.10.10.10 128 229 1.4E-22 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_02600 f143f81618674651de5e35f671107a1d 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 228 1.8E-17 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD13_02600 f143f81618674651de5e35f671107a1d 229 SMART SM00448 4 114 5.2E-40 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_02600 f143f81618674651de5e35f671107a1d 229 Pfam PF00072 Response regulator receiver domain 6 114 1.9E-27 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_02600 f143f81618674651de5e35f671107a1d 229 Gene3D G3DSA:3.40.50.2300 1 127 8.7E-37 T 17-10-2018 BJD13_02600 f143f81618674651de5e35f671107a1d 229 SMART SM00862 152 228 7.6E-20 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD13_19380 d2f5f0f3ba2d3f6d3fd112cc24b89a08 562 Gene3D G3DSA:1.10.730.10 436 562 4.4E-156 T 17-10-2018 BJD13_19380 d2f5f0f3ba2d3f6d3fd112cc24b89a08 562 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 6 92 1.1E-24 T 17-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BJD13_19380 d2f5f0f3ba2d3f6d3fd112cc24b89a08 562 SUPERFAMILY SSF55190 4 112 1.27E-26 T 17-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 BJD13_19380 d2f5f0f3ba2d3f6d3fd112cc24b89a08 562 SUPERFAMILY SSF47323 436 562 1.18E-35 T 17-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD13_19380 d2f5f0f3ba2d3f6d3fd112cc24b89a08 562 SUPERFAMILY SSF52374 117 452 6.48E-89 T 17-10-2018 BJD13_19380 d2f5f0f3ba2d3f6d3fd112cc24b89a08 562 Hamap MF_00123 Arginine--tRNA ligase [argS]. 3 562 25.572 T 17-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 BJD13_19380 d2f5f0f3ba2d3f6d3fd112cc24b89a08 562 Gene3D G3DSA:3.30.1360.70 1 110 1.9E-25 T 17-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 BJD13_19380 d2f5f0f3ba2d3f6d3fd112cc24b89a08 562 PRINTS PR01038 Arginyl-tRNA synthetase signature 160 173 1.9E-22 T 17-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 BJD13_19380 d2f5f0f3ba2d3f6d3fd112cc24b89a08 562 PRINTS PR01038 Arginyl-tRNA synthetase signature 136 152 1.9E-22 T 17-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 BJD13_19380 d2f5f0f3ba2d3f6d3fd112cc24b89a08 562 PRINTS PR01038 Arginyl-tRNA synthetase signature 121 136 1.9E-22 T 17-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 BJD13_19380 d2f5f0f3ba2d3f6d3fd112cc24b89a08 562 PRINTS PR01038 Arginyl-tRNA synthetase signature 308 329 1.9E-22 T 17-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 BJD13_19380 d2f5f0f3ba2d3f6d3fd112cc24b89a08 562 SMART SM00836 441 562 1.0E-55 T 17-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 BJD13_19380 d2f5f0f3ba2d3f6d3fd112cc24b89a08 562 Pfam PF00750 tRNA synthetases class I (R) 103 410 2.1E-24 T 17-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 BJD13_19380 d2f5f0f3ba2d3f6d3fd112cc24b89a08 562 Pfam PF05746 DALR anticodon binding domain 441 562 3.1E-36 T 17-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 BJD13_19380 d2f5f0f3ba2d3f6d3fd112cc24b89a08 562 Gene3D G3DSA:3.40.50.620 122 435 4.4E-156 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD13_19380 d2f5f0f3ba2d3f6d3fd112cc24b89a08 562 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 28 562 1.3E-126 T 17-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 BJD13_19380 d2f5f0f3ba2d3f6d3fd112cc24b89a08 562 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 131 140 - T 17-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD13_19380 d2f5f0f3ba2d3f6d3fd112cc24b89a08 562 SMART SM01016 3 92 1.0E-38 T 17-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BJD13_09785 69703e7a1caee7f90975c182f990e1d3 349 Pfam PF01545 Cation efflux family 42 245 9.2E-32 T 17-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 BJD13_09785 69703e7a1caee7f90975c182f990e1d3 349 Gene3D G3DSA:1.20.1510.10 38 248 2.6E-35 T 17-10-2018 IPR027469 Cation efflux transmembrane domain superfamily BJD13_09785 69703e7a1caee7f90975c182f990e1d3 349 SUPERFAMILY SSF161111 37 250 3.4E-42 T 17-10-2018 IPR027469 Cation efflux transmembrane domain superfamily BJD13_09785 69703e7a1caee7f90975c182f990e1d3 349 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 40 331 1.3E-42 T 17-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 BJD13_12520 16db95231ac3bce5475114502251228e 212 SUPERFAMILY SSF140478 26 179 3.53E-54 T 17-10-2018 IPR023353 LemA-like domain superfamily BJD13_12520 16db95231ac3bce5475114502251228e 212 Pfam PF04011 LemA family 8 192 7.4E-67 T 17-10-2018 IPR007156 LemA BJD13_12520 16db95231ac3bce5475114502251228e 212 Gene3D G3DSA:1.20.1440.20 15 192 1.2E-63 T 17-10-2018 IPR023353 LemA-like domain superfamily BJD13_22310 9fb702599c0f1a21efacbccf2df1d1f6 328 Gene3D G3DSA:1.10.101.10 48 116 3.7E-10 T 17-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 BJD13_22310 9fb702599c0f1a21efacbccf2df1d1f6 328 SUPERFAMILY SSF141523 193 325 2.22E-26 T 17-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like BJD13_22310 9fb702599c0f1a21efacbccf2df1d1f6 328 Pfam PF03734 L,D-transpeptidase catalytic domain 196 325 3.7E-17 T 17-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 BJD13_22310 9fb702599c0f1a21efacbccf2df1d1f6 328 SUPERFAMILY SSF47090 55 106 4.08E-11 T 17-10-2018 IPR036365 PGBD-like superfamily BJD13_22310 9fb702599c0f1a21efacbccf2df1d1f6 328 Gene3D G3DSA:2.40.440.10 136 328 9.5E-45 T 17-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like BJD13_22310 9fb702599c0f1a21efacbccf2df1d1f6 328 Pfam PF01471 Putative peptidoglycan binding domain 56 105 1.9E-9 T 17-10-2018 IPR002477 Peptidoglycan binding-like BJD13_17350 18505afbca158b36ff5d517a5023c580 539 SUPERFAMILY SSF53474 215 513 3.67E-32 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_17350 18505afbca158b36ff5d517a5023c580 539 Pfam PF00756 Putative esterase 218 352 1.2E-15 T 17-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 BJD13_07795 704ba936226ef793e27da514dddbfc18 186 SUPERFAMILY SSF55021 10 93 9.58E-10 T 17-10-2018 BJD13_07795 704ba936226ef793e27da514dddbfc18 186 Gene3D G3DSA:3.30.70.260 96 182 1.2E-16 T 17-10-2018 BJD13_07795 704ba936226ef793e27da514dddbfc18 186 SUPERFAMILY SSF55021 97 185 7.4E-19 T 17-10-2018 BJD13_07795 704ba936226ef793e27da514dddbfc18 186 Gene3D G3DSA:3.30.70.260 29 95 1.2E-8 T 17-10-2018 BJD13_07795 704ba936226ef793e27da514dddbfc18 186 PIRSF PIRSF028103 11 186 1.4E-69 T 17-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 BJD13_07795 704ba936226ef793e27da514dddbfc18 186 Pfam PF13740 ACT domain 14 87 1.1E-13 T 17-10-2018 BJD13_01460 30ed7317cfea8b1ba695809d41eac8bc 179 SUPERFAMILY SSF159941 6 162 2.48E-49 T 17-10-2018 IPR024047 MM3350-like superfamily BJD13_01460 30ed7317cfea8b1ba695809d41eac8bc 179 Pfam PF07929 Plasmid pRiA4b ORF-3-like protein 8 160 6.8E-46 T 17-10-2018 IPR012912 Plasmid pRiA4b, Orf3 BJD13_01460 30ed7317cfea8b1ba695809d41eac8bc 179 Gene3D G3DSA:3.10.290.30 3 163 2.8E-47 T 17-10-2018 IPR024047 MM3350-like superfamily BJD13_17595 1d1bc095d9eb2fa241bf44bc64d50c57 1011 SUPERFAMILY SSF49452 31 96 2.75E-7 T 17-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 BJD13_17595 1d1bc095d9eb2fa241bf44bc64d50c57 1011 SUPERFAMILY SSF56935 111 1011 1.06E-61 T 17-10-2018 BJD13_17595 1d1bc095d9eb2fa241bf44bc64d50c57 1011 Pfam PF00593 TonB dependent receptor 405 982 3.5E-17 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_04670 10a77931421d1c327927fe7c4253f1dc 316 SMART SM00859 7 128 3.3E-32 T 17-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 BJD13_04670 10a77931421d1c327927fe7c4253f1dc 316 Gene3D G3DSA:3.40.50.720 8 308 7.8E-92 T 17-10-2018 BJD13_04670 10a77931421d1c327927fe7c4253f1dc 316 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 6 316 33.092 T 17-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BJD13_04670 10a77931421d1c327927fe7c4253f1dc 316 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 8 122 7.0E-28 T 17-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 BJD13_04670 10a77931421d1c327927fe7c4253f1dc 316 SUPERFAMILY SSF51735 6 152 3.66E-41 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_04670 10a77931421d1c327927fe7c4253f1dc 316 SUPERFAMILY SSF55347 136 290 1.31E-35 T 17-10-2018 BJD13_04670 10a77931421d1c327927fe7c4253f1dc 316 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 7 315 2.4E-101 T 17-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BJD13_04670 10a77931421d1c327927fe7c4253f1dc 316 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 131 147 - T 17-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BJD13_04670 10a77931421d1c327927fe7c4253f1dc 316 Gene3D G3DSA:3.30.360.10 134 290 7.8E-92 T 17-10-2018 BJD13_19425 3e09f60b6c1b8efe177a2114118a69b8 102 Pfam PF11731 Pathogenicity locus 8 91 7.0E-31 T 17-10-2018 IPR021725 Pathogenicity locus BJD13_19425 3e09f60b6c1b8efe177a2114118a69b8 102 Gene3D G3DSA:1.10.150.20 10 97 1.4E-5 T 17-10-2018 BJD13_17495 6b64521be8dd12d2c8063520f6e141fc 634 SUPERFAMILY SSF55781 338 511 1.47E-41 T 17-10-2018 BJD13_17495 6b64521be8dd12d2c8063520f6e141fc 634 PRINTS PR01033 Phytochrome signature 159 178 1.1E-18 T 17-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 BJD13_17495 6b64521be8dd12d2c8063520f6e141fc 634 PRINTS PR01033 Phytochrome signature 437 456 1.1E-18 T 17-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 BJD13_17495 6b64521be8dd12d2c8063520f6e141fc 634 PRINTS PR01033 Phytochrome signature 246 267 1.1E-18 T 17-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 BJD13_17495 6b64521be8dd12d2c8063520f6e141fc 634 PRINTS PR01033 Phytochrome signature 345 365 1.1E-18 T 17-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 BJD13_17495 6b64521be8dd12d2c8063520f6e141fc 634 PRINTS PR01033 Phytochrome signature 471 489 1.1E-18 T 17-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 BJD13_17495 6b64521be8dd12d2c8063520f6e141fc 634 Pfam PF00360 Phytochrome region 325 510 3.6E-53 T 17-10-2018 IPR013515 Phytochrome, central region GO:0006355|GO:0009584|GO:0018298 BJD13_17495 6b64521be8dd12d2c8063520f6e141fc 634 Gene3D G3DSA:3.30.450.20 17 249 2.2E-152 T 17-10-2018 BJD13_17495 6b64521be8dd12d2c8063520f6e141fc 634 SUPERFAMILY SSF55785 508 632 8.38E-11 T 17-10-2018 IPR035965 PAS domain superfamily BJD13_17495 6b64521be8dd12d2c8063520f6e141fc 634 SMART SM00065 144 318 0.0037 T 17-10-2018 IPR003018 GAF domain GO:0005515 BJD13_17495 6b64521be8dd12d2c8063520f6e141fc 634 SUPERFAMILY SSF55781 142 310 1.85E-54 T 17-10-2018 BJD13_17495 6b64521be8dd12d2c8063520f6e141fc 634 Gene3D G3DSA:3.30.450.20 516 633 1.8E-10 T 17-10-2018 BJD13_17495 6b64521be8dd12d2c8063520f6e141fc 634 SUPERFAMILY SSF55785 4 120 1.24E-28 T 17-10-2018 IPR035965 PAS domain superfamily BJD13_17495 6b64521be8dd12d2c8063520f6e141fc 634 Pfam PF08448 PAS fold 542 632 2.7E-5 T 17-10-2018 IPR013656 PAS fold-4 BJD13_17495 6b64521be8dd12d2c8063520f6e141fc 634 Gene3D G3DSA:3.30.450.270 317 502 2.2E-152 T 17-10-2018 BJD13_17495 6b64521be8dd12d2c8063520f6e141fc 634 Pfam PF08446 PAS fold 13 119 2.3E-12 T 17-10-2018 IPR013654 PAS fold-2 GO:0006355 BJD13_17495 6b64521be8dd12d2c8063520f6e141fc 634 SMART SM00091 17 84 2.7 T 17-10-2018 IPR000014 PAS domain BJD13_17495 6b64521be8dd12d2c8063520f6e141fc 634 SMART SM00091 517 588 8.4 T 17-10-2018 IPR000014 PAS domain BJD13_17495 6b64521be8dd12d2c8063520f6e141fc 634 Gene3D G3DSA:3.30.450.40 13 484 2.2E-152 T 17-10-2018 IPR029016 GAF-like domain superfamily BJD13_17495 6b64521be8dd12d2c8063520f6e141fc 634 Pfam PF01590 GAF domain 149 296 1.3E-16 T 17-10-2018 IPR003018 GAF domain GO:0005515 BJD13_18780 bf2dab9d42de90cd11e64a865b4dc777 66 SUPERFAMILY SSF47413 3 64 2.01E-18 T 17-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BJD13_18780 bf2dab9d42de90cd11e64a865b4dc777 66 Pfam PF01381 Helix-turn-helix 5 57 2.7E-17 T 17-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BJD13_18780 bf2dab9d42de90cd11e64a865b4dc777 66 SMART SM00530 4 59 7.6E-19 T 17-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BJD13_18780 bf2dab9d42de90cd11e64a865b4dc777 66 Gene3D G3DSA:1.10.260.40 1 64 9.0E-26 T 17-10-2018 BJD13_04845 456fbd8a972401a9326b8fa00b751f1e 992 SUPERFAMILY SSF49452 32 113 8.24E-8 T 17-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 BJD13_04845 456fbd8a972401a9326b8fa00b751f1e 992 Pfam PF13620 Carboxypeptidase regulatory-like domain 39 113 6.6E-11 T 17-10-2018 BJD13_04845 456fbd8a972401a9326b8fa00b751f1e 992 Pfam PF00593 TonB dependent receptor 378 988 2.4E-17 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_04845 456fbd8a972401a9326b8fa00b751f1e 992 Gene3D G3DSA:2.60.40.1120 40 115 1.4E-7 T 17-10-2018 BJD13_04845 456fbd8a972401a9326b8fa00b751f1e 992 SUPERFAMILY SSF56935 121 990 5.86E-58 T 17-10-2018 BJD13_11770 148fdcf4055473352feb1a52fa14cb57 465 TIGRFAM TIGR01358 DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 17 458 2.3E-224 T 17-10-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 BJD13_11770 148fdcf4055473352feb1a52fa14cb57 465 Pfam PF01474 Class-II DAHP synthetase family 17 451 2.1E-187 T 17-10-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 BJD13_11770 148fdcf4055473352feb1a52fa14cb57 465 SUPERFAMILY SSF51569 13 454 1.61E-181 T 17-10-2018 BJD13_11770 148fdcf4055473352feb1a52fa14cb57 465 Gene3D G3DSA:3.20.20.70 210 457 8.7E-98 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD13_11770 148fdcf4055473352feb1a52fa14cb57 465 Gene3D G3DSA:3.20.20.70 50 209 9.8E-49 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD13_02305 d0e9ca6e5a175e19f480cb01e4c2cfc8 109 Gene3D G3DSA:3.30.750.24 10 105 2.1E-14 T 17-10-2018 IPR036513 STAS domain superfamily BJD13_02305 d0e9ca6e5a175e19f480cb01e4c2cfc8 109 SUPERFAMILY SSF52091 1 97 5.89E-15 T 17-10-2018 IPR036513 STAS domain superfamily BJD13_02305 d0e9ca6e5a175e19f480cb01e4c2cfc8 109 Pfam PF13466 STAS domain 14 92 2.6E-15 T 17-10-2018 IPR002645 STAS domain BJD13_22610 687f69fd13a4b2ca60b52aa510fd2f7e 620 Pfam PF02080 TrkA-C domain 246 313 7.4E-9 T 17-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 BJD13_22610 687f69fd13a4b2ca60b52aa510fd2f7e 620 Pfam PF02080 TrkA-C domain 338 403 2.6E-9 T 17-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 BJD13_22610 687f69fd13a4b2ca60b52aa510fd2f7e 620 Gene3D G3DSA:3.30.70.1450 243 316 8.3E-8 T 17-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BJD13_22610 687f69fd13a4b2ca60b52aa510fd2f7e 620 Gene3D G3DSA:3.30.70.1450 335 408 1.2E-13 T 17-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BJD13_22610 687f69fd13a4b2ca60b52aa510fd2f7e 620 Pfam PF03600 Citrate transporter 23 563 6.2E-47 T 17-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 BJD13_22610 687f69fd13a4b2ca60b52aa510fd2f7e 620 SUPERFAMILY SSF116726 337 413 5.49E-15 T 17-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BJD13_22610 687f69fd13a4b2ca60b52aa510fd2f7e 620 SUPERFAMILY SSF116726 240 313 2.62E-9 T 17-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BJD13_15770 497a8dff57fefa359b815c9268aa3d6f 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 50 2.0E-9 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_15770 497a8dff57fefa359b815c9268aa3d6f 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 40 2.0E-9 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_15770 497a8dff57fefa359b815c9268aa3d6f 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 50 61 2.0E-9 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_15770 497a8dff57fefa359b815c9268aa3d6f 318 Pfam PF03466 LysR substrate binding domain 100 301 3.9E-51 T 17-10-2018 IPR005119 LysR, substrate-binding BJD13_15770 497a8dff57fefa359b815c9268aa3d6f 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 16 73 2.9E-20 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_15770 497a8dff57fefa359b815c9268aa3d6f 318 SUPERFAMILY SSF53850 102 302 3.26E-48 T 17-10-2018 BJD13_15770 497a8dff57fefa359b815c9268aa3d6f 318 Gene3D G3DSA:3.40.190.10 103 299 2.2E-58 T 17-10-2018 BJD13_15770 497a8dff57fefa359b815c9268aa3d6f 318 Gene3D G3DSA:3.40.190.10 176 276 2.2E-58 T 17-10-2018 BJD13_15770 497a8dff57fefa359b815c9268aa3d6f 318 Gene3D G3DSA:1.10.10.10 13 102 1.4E-22 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_15770 497a8dff57fefa359b815c9268aa3d6f 318 SUPERFAMILY SSF46785 13 92 7.71E-21 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_09295 19128441ac9dcbd5472e959e257fdd5c 89 Gene3D G3DSA:3.40.630.30 2 89 1.2E-27 T 17-10-2018 BJD13_09295 19128441ac9dcbd5472e959e257fdd5c 89 SUPERFAMILY SSF55729 3 88 3.75E-26 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD13_09295 19128441ac9dcbd5472e959e257fdd5c 89 Pfam PF14542 GCN5-related N-acetyl-transferase 11 87 9.3E-27 T 17-10-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase BJD13_11350 688d011fc5953e987be7c34227358a97 343 SMART SM00729 23 225 8.1E-4 T 17-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 BJD13_11350 688d011fc5953e987be7c34227358a97 343 SUPERFAMILY SSF102114 13 291 7.98E-68 T 17-10-2018 BJD13_11350 688d011fc5953e987be7c34227358a97 343 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 29 40 - T 17-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BJD13_11350 688d011fc5953e987be7c34227358a97 343 Pfam PF04055 Radical SAM superfamily 28 190 2.2E-25 T 17-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BJD13_11350 688d011fc5953e987be7c34227358a97 343 Pfam PF06463 Molybdenum Cofactor Synthesis C 200 323 3.2E-34 T 17-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BJD13_11350 688d011fc5953e987be7c34227358a97 343 Pfam PF13353 4Fe-4S single cluster domain 31 117 6.5E-6 T 17-10-2018 BJD13_11350 688d011fc5953e987be7c34227358a97 343 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 14 343 2.6E-104 T 17-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BJD13_11350 688d011fc5953e987be7c34227358a97 343 Gene3D G3DSA:3.20.20.70 11 343 3.4E-83 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD13_11350 688d011fc5953e987be7c34227358a97 343 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 14 343 39.336 T 17-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BJD13_16985 563a860a6b21ed4b62bee522f431930d 442 Gene3D G3DSA:3.40.50.300 98 271 6.5E-45 T 17-10-2018 BJD13_16985 563a860a6b21ed4b62bee522f431930d 442 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 1 441 32.03 T 17-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 BJD13_16985 563a860a6b21ed4b62bee522f431930d 442 Gene3D G3DSA:3.30.300.180 1 97 1.6E-23 T 17-10-2018 IPR038454 DnaA, N-terminal domain superfamily BJD13_16985 563a860a6b21ed4b62bee522f431930d 442 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 172 186 4.0E-46 T 17-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like BJD13_16985 563a860a6b21ed4b62bee522f431930d 442 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 204 218 4.0E-46 T 17-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like BJD13_16985 563a860a6b21ed4b62bee522f431930d 442 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 140 160 4.0E-46 T 17-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like BJD13_16985 563a860a6b21ed4b62bee522f431930d 442 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 400 419 4.0E-46 T 17-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like BJD13_16985 563a860a6b21ed4b62bee522f431930d 442 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 238 265 4.0E-46 T 17-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like BJD13_16985 563a860a6b21ed4b62bee522f431930d 442 SUPERFAMILY SSF48295 339 441 1.62E-35 T 17-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 BJD13_16985 563a860a6b21ed4b62bee522f431930d 442 Gene3D G3DSA:1.10.8.60 273 344 2.3E-21 T 17-10-2018 BJD13_16985 563a860a6b21ed4b62bee522f431930d 442 SMART SM00382 139 270 1.4E-4 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_16985 563a860a6b21ed4b62bee522f431930d 442 SUPERFAMILY SSF52540 107 318 1.43E-38 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_16985 563a860a6b21ed4b62bee522f431930d 442 ProSitePatterns PS01008 DnaA protein signature. 400 419 - T 17-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 BJD13_16985 563a860a6b21ed4b62bee522f431930d 442 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 4 440 6.6E-166 T 17-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 BJD13_16985 563a860a6b21ed4b62bee522f431930d 442 Gene3D G3DSA:1.10.1750.10 349 442 1.4E-34 T 17-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 BJD13_16985 563a860a6b21ed4b62bee522f431930d 442 Pfam PF11638 DnaA N-terminal domain 1 62 2.8E-14 T 17-10-2018 IPR024633 DnaA N-terminal domain BJD13_16985 563a860a6b21ed4b62bee522f431930d 442 Pfam PF00308 Bacterial dnaA protein 106 324 1.2E-84 T 17-10-2018 IPR013317 Chromosomal replication initiator protein DnaA BJD13_16985 563a860a6b21ed4b62bee522f431930d 442 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 353 419 6.8E-30 T 17-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 BJD13_16985 563a860a6b21ed4b62bee522f431930d 442 SMART SM00760 350 419 1.6E-39 T 17-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 BJD13_02230 21e8a592c4080657087a3d216d3e4d8f 296 Gene3D G3DSA:2.60.120.10 142 241 1.7E-68 T 17-10-2018 IPR014710 RmlC-like jelly roll fold BJD13_02230 21e8a592c4080657087a3d216d3e4d8f 296 Gene3D G3DSA:2.60.120.10 14 267 1.7E-68 T 17-10-2018 IPR014710 RmlC-like jelly roll fold BJD13_02230 21e8a592c4080657087a3d216d3e4d8f 296 Pfam PF02678 Pirin 16 120 1.4E-34 T 17-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 BJD13_02230 21e8a592c4080657087a3d216d3e4d8f 296 SUPERFAMILY SSF51182 3 284 1.41E-80 T 17-10-2018 IPR011051 RmlC-like cupin domain superfamily BJD13_02230 21e8a592c4080657087a3d216d3e4d8f 296 Pfam PF05726 Pirin C-terminal cupin domain 174 272 1.5E-26 T 17-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 BJD13_02230 21e8a592c4080657087a3d216d3e4d8f 296 PIRSF PIRSF006232 1 280 3.7E-90 T 17-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 BJD13_09530 564d45856a101851974d4ea759ecbfda 245 Gene3D G3DSA:3.30.420.10 19 227 3.2E-71 T 17-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BJD13_09530 564d45856a101851974d4ea759ecbfda 245 Pfam PF01351 Ribonuclease HII 38 216 4.4E-37 T 17-10-2018 IPR024567 Ribonuclease HII/HIII domain BJD13_09530 564d45856a101851974d4ea759ecbfda 245 Hamap MF_00052_B Ribonuclease HII [rnhB]. 36 217 36.517 T 17-10-2018 IPR022898 Ribonuclease HII GO:0004523 BJD13_09530 564d45856a101851974d4ea759ecbfda 245 SUPERFAMILY SSF53098 33 223 1.4E-65 T 17-10-2018 IPR012337 Ribonuclease H-like superfamily BJD13_05640 c6c1a847e6baa04555098f1374ae8ec4 146 SUPERFAMILY SSF52799 6 120 1.13E-8 T 17-10-2018 IPR029021 Protein-tyrosine phosphatase-like BJD13_05640 c6c1a847e6baa04555098f1374ae8ec4 146 TIGRFAM TIGR01244 TIGR01244: TIGR01244 family protein 3 137 4.6E-38 T 17-10-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 BJD13_05640 c6c1a847e6baa04555098f1374ae8ec4 146 Pfam PF04273 Putative phosphatase (DUF442) 3 109 3.6E-34 T 17-10-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 BJD13_05640 c6c1a847e6baa04555098f1374ae8ec4 146 Gene3D G3DSA:3.90.190.10 1 140 4.8E-42 T 17-10-2018 IPR029021 Protein-tyrosine phosphatase-like BJD13_11555 82f9fadb1a2b09e7700a24b3bc7d3a49 229 SMART SM00448 3 116 1.2E-41 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_11555 82f9fadb1a2b09e7700a24b3bc7d3a49 229 Pfam PF00072 Response regulator receiver domain 5 117 6.3E-25 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_11555 82f9fadb1a2b09e7700a24b3bc7d3a49 229 SUPERFAMILY SSF52172 3 125 6.4E-42 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_11555 82f9fadb1a2b09e7700a24b3bc7d3a49 229 Gene3D G3DSA:1.10.10.10 129 228 3.7E-35 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_11555 82f9fadb1a2b09e7700a24b3bc7d3a49 229 SUPERFAMILY SSF46894 127 225 1.87E-29 T 17-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BJD13_11555 82f9fadb1a2b09e7700a24b3bc7d3a49 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 2 226 2.1E-112 T 17-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 BJD13_11555 82f9fadb1a2b09e7700a24b3bc7d3a49 229 SMART SM00862 150 225 6.1E-28 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD13_11555 82f9fadb1a2b09e7700a24b3bc7d3a49 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 1.5E-25 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD13_11555 82f9fadb1a2b09e7700a24b3bc7d3a49 229 Gene3D G3DSA:3.40.50.2300 1 128 8.7E-39 T 17-10-2018 BJD13_03000 12fb78465d3f0afbc3769cb9e1f7a967 216 SUPERFAMILY SSF52833 47 211 1.06E-40 T 17-10-2018 IPR036249 Thioredoxin-like superfamily BJD13_03000 12fb78465d3f0afbc3769cb9e1f7a967 216 Gene3D G3DSA:3.40.30.10 40 215 7.1E-42 T 17-10-2018 BJD13_03000 12fb78465d3f0afbc3769cb9e1f7a967 216 Pfam PF02630 SCO1/SenC 52 190 1.0E-21 T 17-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_07385 e24a4d4c35861d76acec8bfbc52a46e8 309 Gene3D G3DSA:1.10.101.10 1 60 3.7E-11 T 17-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 BJD13_07385 e24a4d4c35861d76acec8bfbc52a46e8 309 Pfam PF01471 Putative peptidoglycan binding domain 1 51 2.8E-11 T 17-10-2018 IPR002477 Peptidoglycan binding-like BJD13_07385 e24a4d4c35861d76acec8bfbc52a46e8 309 SUPERFAMILY SSF47090 1 57 5.18E-12 T 17-10-2018 IPR036365 PGBD-like superfamily BJD13_11030 ec68742fce7476f47db8ef8cc6bdd219 384 Gene3D G3DSA:1.10.580.10 37 363 4.4E-125 T 17-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 BJD13_11030 ec68742fce7476f47db8ef8cc6bdd219 384 PRINTS PR00143 Citrate synthase signature 336 350 1.3E-36 T 17-10-2018 IPR002020 Citrate synthase GO:0046912 BJD13_11030 ec68742fce7476f47db8ef8cc6bdd219 384 PRINTS PR00143 Citrate synthase signature 134 147 1.3E-36 T 17-10-2018 IPR002020 Citrate synthase GO:0046912 BJD13_11030 ec68742fce7476f47db8ef8cc6bdd219 384 PRINTS PR00143 Citrate synthase signature 259 279 1.3E-36 T 17-10-2018 IPR002020 Citrate synthase GO:0046912 BJD13_11030 ec68742fce7476f47db8ef8cc6bdd219 384 PRINTS PR00143 Citrate synthase signature 184 199 1.3E-36 T 17-10-2018 IPR002020 Citrate synthase GO:0046912 BJD13_11030 ec68742fce7476f47db8ef8cc6bdd219 384 PRINTS PR00143 Citrate synthase signature 206 234 1.3E-36 T 17-10-2018 IPR002020 Citrate synthase GO:0046912 BJD13_11030 ec68742fce7476f47db8ef8cc6bdd219 384 PRINTS PR00143 Citrate synthase signature 316 332 1.3E-36 T 17-10-2018 IPR002020 Citrate synthase GO:0046912 BJD13_11030 ec68742fce7476f47db8ef8cc6bdd219 384 ProSitePatterns PS00480 Citrate synthase signature. 266 278 - T 17-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 BJD13_11030 ec68742fce7476f47db8ef8cc6bdd219 384 PIRSF PIRSF001369 10 384 3.0E-110 T 17-10-2018 IPR024176 Citrate synthase, bacterial-type BJD13_11030 ec68742fce7476f47db8ef8cc6bdd219 384 SUPERFAMILY SSF48256 17 377 1.31E-122 T 17-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 BJD13_11030 ec68742fce7476f47db8ef8cc6bdd219 384 Pfam PF00285 Citrate synthase, C-terminal domain 17 365 4.8E-113 T 17-10-2018 IPR002020 Citrate synthase GO:0046912 BJD13_11030 ec68742fce7476f47db8ef8cc6bdd219 384 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 16 383 1.5E-153 T 17-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 BJD13_11030 ec68742fce7476f47db8ef8cc6bdd219 384 Gene3D G3DSA:1.10.230.10 232 330 4.4E-125 T 17-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain BJD13_22225 6cdce96483b546433172ac28b3adcf25 808 Gene3D G3DSA:3.40.710.10 399 612 1.4E-69 T 17-10-2018 BJD13_22225 6cdce96483b546433172ac28b3adcf25 808 Gene3D G3DSA:3.40.710.10 642 804 1.4E-31 T 17-10-2018 BJD13_22225 6cdce96483b546433172ac28b3adcf25 808 Gene3D G3DSA:3.40.710.10 258 329 5.7E-6 T 17-10-2018 BJD13_22225 6cdce96483b546433172ac28b3adcf25 808 SUPERFAMILY SSF56601 216 785 3.09E-117 T 17-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BJD13_22225 6cdce96483b546433172ac28b3adcf25 808 Gene3D G3DSA:1.10.3810.10 52 251 3.4E-68 T 17-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BJD13_22225 6cdce96483b546433172ac28b3adcf25 808 Pfam PF00905 Penicillin binding protein transpeptidase domain 423 596 7.6E-22 T 17-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 BJD13_22225 6cdce96483b546433172ac28b3adcf25 808 Pfam PF00912 Transglycosylase 60 235 7.6E-57 T 17-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BJD13_22225 6cdce96483b546433172ac28b3adcf25 808 SUPERFAMILY SSF53955 47 262 6.47E-69 T 17-10-2018 IPR023346 Lysozyme-like domain superfamily BJD13_22225 6cdce96483b546433172ac28b3adcf25 808 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 69 756 1.4E-171 T 17-10-2018 BJD13_22225 6cdce96483b546433172ac28b3adcf25 808 Pfam PF17092 Penicillin-binding protein OB-like domain 322 418 1.6E-10 T 17-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BJD13_10670 03db16202c0c564f204e73f0992d70f5 706 SUPERFAMILY SSF53474 449 704 8.68E-69 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_10670 03db16202c0c564f204e73f0992d70f5 706 Gene3D G3DSA:2.120.10.30 19 165 1.1E-24 T 17-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like BJD13_10670 03db16202c0c564f204e73f0992d70f5 706 SUPERFAMILY SSF82171 34 440 4.45E-37 T 17-10-2018 BJD13_10670 03db16202c0c564f204e73f0992d70f5 706 Gene3D G3DSA:2.120.10.30 189 444 2.4E-15 T 17-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like BJD13_10670 03db16202c0c564f204e73f0992d70f5 706 Pfam PF07676 WD40-like Beta Propeller Repeat 138 148 0.24 T 17-10-2018 IPR011659 WD40-like Beta Propeller BJD13_10670 03db16202c0c564f204e73f0992d70f5 706 Pfam PF07676 WD40-like Beta Propeller Repeat 300 318 0.1 T 17-10-2018 IPR011659 WD40-like Beta Propeller BJD13_10670 03db16202c0c564f204e73f0992d70f5 706 Pfam PF07676 WD40-like Beta Propeller Repeat 38 67 0.31 T 17-10-2018 IPR011659 WD40-like Beta Propeller BJD13_10670 03db16202c0c564f204e73f0992d70f5 706 Pfam PF07676 WD40-like Beta Propeller Repeat 83 114 5.9E-5 T 17-10-2018 IPR011659 WD40-like Beta Propeller BJD13_10670 03db16202c0c564f204e73f0992d70f5 706 Gene3D G3DSA:3.40.50.1820 445 706 1.2E-63 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_10670 03db16202c0c564f204e73f0992d70f5 706 Pfam PF00326 Prolyl oligopeptidase family 496 705 4.1E-59 T 17-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 BJD13_23545 6447775662692f247957c35b514418b2 355 Pfam PF00704 Glycosyl hydrolases family 18 48 340 5.4E-27 T 17-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 BJD13_23545 6447775662692f247957c35b514418b2 355 SMART SM00636 28 342 1.8E-20 T 17-10-2018 IPR011583 Chitinase II GO:0008061 BJD13_23545 6447775662692f247957c35b514418b2 355 SUPERFAMILY SSF51445 46 346 2.02E-42 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily BJD13_23545 6447775662692f247957c35b514418b2 355 Gene3D G3DSA:3.10.50.10 248 313 1.8E-81 T 17-10-2018 IPR029070 Chitinase insertion domain superfamily BJD13_23545 6447775662692f247957c35b514418b2 355 Gene3D G3DSA:3.20.20.80 50 347 1.8E-81 T 17-10-2018 BJD13_03285 e71c436294bed31957314f367862143a 1074 Gene3D G3DSA:2.60.40.1120 32 115 8.4E-11 T 17-10-2018 BJD13_03285 e71c436294bed31957314f367862143a 1074 Pfam PF13620 Carboxypeptidase regulatory-like domain 34 114 5.5E-16 T 17-10-2018 BJD13_03285 e71c436294bed31957314f367862143a 1074 Pfam PF07715 TonB-dependent Receptor Plug Domain 145 244 2.2E-4 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_03285 e71c436294bed31957314f367862143a 1074 SUPERFAMILY SSF56935 144 1019 1.24E-46 T 17-10-2018 BJD13_03285 e71c436294bed31957314f367862143a 1074 Gene3D G3DSA:2.40.170.20 274 640 3.3E-15 T 17-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BJD13_03285 e71c436294bed31957314f367862143a 1074 SUPERFAMILY SSF49464 33 116 1.65E-11 T 17-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily BJD13_22900 63591098425c8fb9cd430c0fb336ebb4 203 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 32 202 5.1E-65 T 17-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 BJD13_22900 63591098425c8fb9cd430c0fb336ebb4 203 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 2 26 7.9E-6 T 17-10-2018 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17 BJD13_22900 63591098425c8fb9cd430c0fb336ebb4 203 Gene3D G3DSA:3.40.50.300 11 203 5.2E-61 T 17-10-2018 BJD13_22900 63591098425c8fb9cd430c0fb336ebb4 203 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 33 202 3.1E-55 T 17-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 BJD13_22900 63591098425c8fb9cd430c0fb336ebb4 203 SUPERFAMILY SSF52540 12 202 1.0E-66 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_22900 63591098425c8fb9cd430c0fb336ebb4 203 PIRSF PIRSF015617 6 203 2.5E-65 T 17-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 BJD13_23160 52ed43ac7100d6da2440e91788ed56f2 259 Pfam PF01618 MotA/TolQ/ExbB proton channel family 112 241 4.8E-38 T 17-10-2018 IPR002898 MotA/TolQ/ExbB proton channel BJD13_23160 52ed43ac7100d6da2440e91788ed56f2 259 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 37 258 39.767 T 17-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 BJD13_23160 52ed43ac7100d6da2440e91788ed56f2 259 TIGRFAM TIGR02796 tolQ: protein TolQ 38 253 8.5E-87 T 17-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 BJD13_16955 916f3b48636777d542920709368d2774 397 SUPERFAMILY SSF48452 179 382 1.71E-17 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_16955 916f3b48636777d542920709368d2774 397 SUPERFAMILY SSF48452 93 222 6.32E-10 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_16955 916f3b48636777d542920709368d2774 397 Pfam PF13181 Tetratricopeptide repeat 111 136 0.086 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD13_16955 916f3b48636777d542920709368d2774 397 SMART SM00028 320 353 14.0 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD13_16955 916f3b48636777d542920709368d2774 397 SMART SM00028 179 212 0.073 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD13_16955 916f3b48636777d542920709368d2774 397 SMART SM00028 106 139 150.0 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD13_16955 916f3b48636777d542920709368d2774 397 SMART SM00028 354 386 140.0 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD13_16955 916f3b48636777d542920709368d2774 397 Pfam PF09295 ChAPs (Chs5p-Arf1p-binding proteins) 144 251 8.4E-5 T 17-10-2018 IPR015374 Chs5p-Arf1p binding BJD13_03040 1463b75e3456b6d889f202c088e11271 257 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 245 30.811 T 17-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD13_03040 1463b75e3456b6d889f202c088e11271 257 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 4 239 6.2E-59 T 17-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD13_03040 1463b75e3456b6d889f202c088e11271 257 SUPERFAMILY SSF55120 1 252 9.64E-81 T 17-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD13_03040 1463b75e3456b6d889f202c088e11271 257 Gene3D G3DSA:3.30.70.660 107 242 4.6E-45 T 17-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 BJD13_03040 1463b75e3456b6d889f202c088e11271 257 PIRSF PIRSF001430 1 255 1.7E-64 T 17-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD13_03040 1463b75e3456b6d889f202c088e11271 257 Pfam PF01416 tRNA pseudouridine synthase 8 104 4.7E-6 T 17-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD13_03040 1463b75e3456b6d889f202c088e11271 257 Pfam PF01416 tRNA pseudouridine synthase 144 241 3.7E-25 T 17-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD13_03040 1463b75e3456b6d889f202c088e11271 257 Gene3D G3DSA:3.30.70.580 1 106 3.2E-32 T 17-10-2018 BJD13_03105 4b24f9c85682b8b450f4fabcbc2d375b 142 PIRSF PIRSF002030 14 142 1.9E-45 T 17-10-2018 IPR016339 Truncated hemoglobin, group 1 BJD13_03105 4b24f9c85682b8b450f4fabcbc2d375b 142 Gene3D G3DSA:1.10.490.10 15 142 3.1E-31 T 17-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 BJD13_03105 4b24f9c85682b8b450f4fabcbc2d375b 142 Pfam PF01152 Bacterial-like globin 27 139 1.3E-11 T 17-10-2018 IPR001486 Truncated hemoglobin GO:0019825 BJD13_03105 4b24f9c85682b8b450f4fabcbc2d375b 142 SUPERFAMILY SSF46458 19 141 2.47E-30 T 17-10-2018 IPR009050 Globin-like superfamily BJD13_04365 5b164b463f3cf0ff61d01c5823fa5677 445 Pfam PF02601 Exonuclease VII, large subunit 125 438 1.5E-92 T 17-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 BJD13_04365 5b164b463f3cf0ff61d01c5823fa5677 445 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 12 356 1.2E-128 T 17-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 BJD13_04365 5b164b463f3cf0ff61d01c5823fa5677 445 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 6 441 30.568 T 17-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 BJD13_04365 5b164b463f3cf0ff61d01c5823fa5677 445 Pfam PF13742 OB-fold nucleic acid binding domain 12 102 1.7E-27 T 17-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 BJD13_14995 1821b47cc97826805f5b3578384315ae 344 PIRSF PIRSF001619 1 320 9.2E-133 T 17-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 BJD13_14995 1821b47cc97826805f5b3578384315ae 344 Hamap MF_01694 Biotin synthase [bioB]. 7 315 41.913 T 17-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 BJD13_14995 1821b47cc97826805f5b3578384315ae 344 SMART SM00729 45 257 9.7E-40 T 17-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 BJD13_14995 1821b47cc97826805f5b3578384315ae 344 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 222 312 3.9E-20 T 17-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 BJD13_14995 1821b47cc97826805f5b3578384315ae 344 Pfam PF04055 Radical SAM superfamily 51 205 1.5E-15 T 17-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BJD13_14995 1821b47cc97826805f5b3578384315ae 344 Gene3D G3DSA:3.20.20.70 6 317 2.9E-128 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD13_14995 1821b47cc97826805f5b3578384315ae 344 SUPERFAMILY SSF102114 7 316 2.09E-96 T 17-10-2018 BJD13_14995 1821b47cc97826805f5b3578384315ae 344 SMART SM00876 222 314 2.5E-49 T 17-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 BJD13_14995 1821b47cc97826805f5b3578384315ae 344 TIGRFAM TIGR00433 bioB: biotin synthase 16 312 3.7E-123 T 17-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 BJD13_05995 24cf3d03b3cfa6ff3738a50786d1f970 457 Gene3D G3DSA:3.40.710.10 43 361 1.1E-86 T 17-10-2018 BJD13_05995 24cf3d03b3cfa6ff3738a50786d1f970 457 Pfam PF00144 Beta-lactamase 44 344 1.8E-65 T 17-10-2018 IPR001466 Beta-lactamase-related BJD13_05995 24cf3d03b3cfa6ff3738a50786d1f970 457 SUPERFAMILY SSF56601 42 350 1.82E-82 T 17-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BJD13_09545 da717877b6064f5cb563551dbade72df 251 Gene3D G3DSA:1.25.40.10 54 235 1.1E-15 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_09545 da717877b6064f5cb563551dbade72df 251 SUPERFAMILY SSF48452 88 220 9.34E-14 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_09545 da717877b6064f5cb563551dbade72df 251 Pfam PF14559 Tetratricopeptide repeat 98 165 3.2E-10 T 17-10-2018 BJD13_09545 da717877b6064f5cb563551dbade72df 251 PIRSF PIRSF030959 2 248 4.0E-115 T 17-10-2018 IPR014562 Uncharacterised conserved protein UCP030959, divergent TPR repeat-containing BJD13_04390 6f86cfa0bb6dd70d863408da76c1f67b 625 SMART SM01340 209 327 1.3E-56 T 17-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 BJD13_04390 6f86cfa0bb6dd70d863408da76c1f67b 625 Pfam PF08676 MutL C terminal dimerisation domain 434 581 2.5E-49 T 17-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 BJD13_04390 6f86cfa0bb6dd70d863408da76c1f67b 625 Gene3D G3DSA:3.30.565.10 1 203 4.1E-66 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_04390 6f86cfa0bb6dd70d863408da76c1f67b 625 SMART SM00853 438 581 3.5E-56 T 17-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 BJD13_04390 6f86cfa0bb6dd70d863408da76c1f67b 625 Gene3D G3DSA:3.30.230.10 214 326 9.0E-38 T 17-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BJD13_04390 6f86cfa0bb6dd70d863408da76c1f67b 625 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 621 29.129 T 17-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 BJD13_04390 6f86cfa0bb6dd70d863408da76c1f67b 625 SUPERFAMILY SSF55874 2 201 1.05E-53 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_04390 6f86cfa0bb6dd70d863408da76c1f67b 625 Gene3D G3DSA:3.30.1370.100 481 576 4.7E-59 T 17-10-2018 BJD13_04390 6f86cfa0bb6dd70d863408da76c1f67b 625 SUPERFAMILY SSF54211 205 327 2.69E-35 T 17-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BJD13_04390 6f86cfa0bb6dd70d863408da76c1f67b 625 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 17-10-2018 IPR014762 DNA mismatch repair, conserved site BJD13_04390 6f86cfa0bb6dd70d863408da76c1f67b 625 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 118 8.7E-10 T 17-10-2018 BJD13_04390 6f86cfa0bb6dd70d863408da76c1f67b 625 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 307 4.3E-96 T 17-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 BJD13_04390 6f86cfa0bb6dd70d863408da76c1f67b 625 Gene3D G3DSA:2.30.42.20 440 618 4.7E-59 T 17-10-2018 BJD13_04390 6f86cfa0bb6dd70d863408da76c1f67b 625 SUPERFAMILY SSF118116 434 623 4.18E-60 T 17-10-2018 IPR037198 MutL, C-terminal domain superfamily BJD13_04390 6f86cfa0bb6dd70d863408da76c1f67b 625 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 211 326 1.9E-38 T 17-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 BJD13_02330 8edca9c14083dc7b08375597987ebc7d 482 SUPERFAMILY SSF47384 251 322 5.89E-12 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD13_02330 8edca9c14083dc7b08375597987ebc7d 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 461 3.9E-9 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_02330 8edca9c14083dc7b08375597987ebc7d 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 427 437 3.9E-9 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_02330 8edca9c14083dc7b08375597987ebc7d 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 423 3.9E-9 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_02330 8edca9c14083dc7b08375597987ebc7d 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 480 3.9E-9 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_02330 8edca9c14083dc7b08375597987ebc7d 482 Pfam PF00512 His Kinase A (phospho-acceptor) domain 261 321 4.2E-10 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_02330 8edca9c14083dc7b08375597987ebc7d 482 Gene3D G3DSA:1.10.287.130 205 318 2.3E-14 T 17-10-2018 BJD13_02330 8edca9c14083dc7b08375597987ebc7d 482 Gene3D G3DSA:3.30.565.10 319 481 3.8E-31 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_02330 8edca9c14083dc7b08375597987ebc7d 482 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 375 480 2.2E-16 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_02330 8edca9c14083dc7b08375597987ebc7d 482 SMART SM00388 258 323 7.8E-12 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_02330 8edca9c14083dc7b08375597987ebc7d 482 SUPERFAMILY SSF55874 312 481 1.7E-35 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_02330 8edca9c14083dc7b08375597987ebc7d 482 SMART SM00304 207 258 2.7E-7 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_02330 8edca9c14083dc7b08375597987ebc7d 482 SMART SM00387 372 482 3.6E-23 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_02330 8edca9c14083dc7b08375597987ebc7d 482 Pfam PF00672 HAMP domain 207 254 2.9E-9 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_02330 8edca9c14083dc7b08375597987ebc7d 482 SUPERFAMILY SSF103190 79 180 9.02E-8 T 17-10-2018 IPR029151 Periplasmic sensor-like domain superfamily BJD13_23220 edb4295bb17615b9ca04895841feb5d6 208 Pfam PF01810 LysE type translocator 16 201 4.0E-41 T 17-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 BJD13_06670 cbbc6f2e7cbb1d03b3c8c55be50b564d 566 SUPERFAMILY SSF52540 354 543 1.52E-33 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_06670 cbbc6f2e7cbb1d03b3c8c55be50b564d 566 SMART SM00962 357 548 4.2E-56 T 17-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BJD13_06670 cbbc6f2e7cbb1d03b3c8c55be50b564d 566 SMART SM00382 356 550 9.2E-12 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_06670 cbbc6f2e7cbb1d03b3c8c55be50b564d 566 Gene3D G3DSA:3.40.50.300 355 536 6.3E-52 T 17-10-2018 BJD13_06670 cbbc6f2e7cbb1d03b3c8c55be50b564d 566 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 1 445 3.5E-73 T 17-10-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 BJD13_06670 cbbc6f2e7cbb1d03b3c8c55be50b564d 566 Pfam PF00448 SRP54-type protein, GTPase domain 359 546 6.5E-38 T 17-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BJD13_10720 a3a5ec24ef6baceec3878879b455a91d 472 Pfam PF00817 impB/mucB/samB family 24 149 2.2E-6 T 17-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 BJD13_10720 a3a5ec24ef6baceec3878879b455a91d 472 SUPERFAMILY SSF56672 1 228 4.22E-29 T 17-10-2018 BJD13_08565 0a81f9a1818adb6feffb7fc9cb18138c 176 Pfam PF11655 Protein of unknown function (DUF2589) 6 165 9.1E-26 T 17-10-2018 IPR024510 Protein of unknown function DUF2589 BJD13_01885 145e4ed6a93b442ec77261c921585dd6 110 Pfam PF12836 Helix-hairpin-helix motif 26 86 1.2E-21 T 17-10-2018 BJD13_01885 145e4ed6a93b442ec77261c921585dd6 110 Gene3D G3DSA:1.10.150.280 15 91 7.0E-19 T 17-10-2018 BJD13_01885 145e4ed6a93b442ec77261c921585dd6 110 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 26 86 2.2E-22 T 17-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain BJD13_01885 145e4ed6a93b442ec77261c921585dd6 110 SUPERFAMILY SSF47781 25 91 3.22E-25 T 17-10-2018 IPR010994 RuvA domain 2-like BJD13_02880 21f0bdba749c5220fb047ecbfa499073 135 Gene3D G3DSA:1.10.10.10 27 135 8.8E-26 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_02880 21f0bdba749c5220fb047ecbfa499073 135 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 33 111 1.2E-16 T 17-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 BJD13_02880 21f0bdba749c5220fb047ecbfa499073 135 SUPERFAMILY SSF46767 30 112 4.58E-18 T 17-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 BJD13_18400 0f87e6337a32144730a1af0e2d050be3 179 TIGRFAM TIGR02999 Sig-70_X6: RNA polymerase sigma factor, TIGR02999 family 4 179 7.9E-57 T 17-10-2018 IPR011517 RNA polymerase sigma-70 ECF-like BJD13_18400 0f87e6337a32144730a1af0e2d050be3 179 Gene3D G3DSA:1.10.10.10 117 179 1.7E-9 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_18400 0f87e6337a32144730a1af0e2d050be3 179 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 178 3.5E-15 T 17-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BJD13_18400 0f87e6337a32144730a1af0e2d050be3 179 SUPERFAMILY SSF88659 123 178 2.04E-7 T 17-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BJD13_18400 0f87e6337a32144730a1af0e2d050be3 179 SUPERFAMILY SSF88946 2 104 2.0E-8 T 17-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BJD13_18400 0f87e6337a32144730a1af0e2d050be3 179 Pfam PF07638 ECF sigma factor 6 179 4.6E-30 T 17-10-2018 IPR011517 RNA polymerase sigma-70 ECF-like BJD13_03830 8b51041a4e3da6a30410e4499e6c1df4 964 Pfam PF00593 TonB dependent receptor 371 963 1.5E-48 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_03830 8b51041a4e3da6a30410e4499e6c1df4 964 Pfam PF07715 TonB-dependent Receptor Plug Domain 69 174 2.5E-26 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_03830 8b51041a4e3da6a30410e4499e6c1df4 964 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 61 - T 17-10-2018 IPR010916 TonB box, conserved site BJD13_03830 8b51041a4e3da6a30410e4499e6c1df4 964 SUPERFAMILY SSF56935 45 964 3.3E-98 T 17-10-2018 BJD13_03830 8b51041a4e3da6a30410e4499e6c1df4 964 Gene3D G3DSA:2.170.130.10 49 178 7.3E-35 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_05320 d8a4cc2deebdee3acbc873ec43319e32 128 SUPERFAMILY SSF81343 12 123 6.1E-25 T 17-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BJD13_05320 d8a4cc2deebdee3acbc873ec43319e32 128 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 3 116 4.6E-15 T 17-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BJD13_05320 d8a4cc2deebdee3acbc873ec43319e32 128 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 17 120 2.8E-28 T 17-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 BJD13_05320 d8a4cc2deebdee3acbc873ec43319e32 128 Gene3D G3DSA:1.20.1300.10 12 123 4.2E-26 T 17-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BJD13_14475 a6628b295febf62697d2298d8bc3233a 345 Gene3D G3DSA:3.40.1030.10 73 345 1.2E-106 T 17-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 BJD13_14475 a6628b295febf62697d2298d8bc3233a 345 Pfam PF02885 Glycosyl transferase family, helical bundle domain 7 68 2.3E-13 T 17-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 BJD13_14475 a6628b295febf62697d2298d8bc3233a 345 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 9 336 1.7E-122 T 17-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 BJD13_14475 a6628b295febf62697d2298d8bc3233a 345 Gene3D G3DSA:1.20.970.10 1 72 9.4E-35 T 17-10-2018 BJD13_14475 a6628b295febf62697d2298d8bc3233a 345 SUPERFAMILY SSF52418 77 340 5.49E-92 T 17-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 BJD13_14475 a6628b295febf62697d2298d8bc3233a 345 SUPERFAMILY SSF47648 4 72 4.06E-18 T 17-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 BJD13_14475 a6628b295febf62697d2298d8bc3233a 345 Pfam PF00591 Glycosyl transferase family, a/b domain 77 327 3.3E-91 T 17-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 BJD13_14475 a6628b295febf62697d2298d8bc3233a 345 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 7 337 36.683 T 17-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 BJD13_08935 91f391894f85ffb13ab7174b38ded7ba 455 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 17-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 BJD13_08935 91f391894f85ffb13ab7174b38ded7ba 455 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 451 4.5E-117 T 17-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BJD13_08935 91f391894f85ffb13ab7174b38ded7ba 455 Gene3D G3DSA:1.10.40.30 382 445 3.5E-149 T 17-10-2018 BJD13_08935 91f391894f85ffb13ab7174b38ded7ba 455 SUPERFAMILY SSF48557 10 452 1.32E-102 T 17-10-2018 IPR008948 L-Aspartase-like GO:0003824 BJD13_08935 91f391894f85ffb13ab7174b38ded7ba 455 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 445 2.4E-47 T 17-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 BJD13_08935 91f391894f85ffb13ab7174b38ded7ba 455 Gene3D G3DSA:1.10.275.10 1 117 2.2E-44 T 17-10-2018 IPR024083 Fumarase/histidase, N-terminal BJD13_08935 91f391894f85ffb13ab7174b38ded7ba 455 Pfam PF00206 Lyase 14 312 3.6E-61 T 17-10-2018 IPR022761 Fumarate lyase, N-terminal BJD13_08935 91f391894f85ffb13ab7174b38ded7ba 455 Gene3D G3DSA:1.20.200.10 118 446 3.5E-149 T 17-10-2018 BJD13_08935 91f391894f85ffb13ab7174b38ded7ba 455 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 9.7E-17 T 17-10-2018 IPR000362 Fumarate lyase family BJD13_08935 91f391894f85ffb13ab7174b38ded7ba 455 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 9.7E-17 T 17-10-2018 IPR000362 Fumarate lyase family BJD13_08935 91f391894f85ffb13ab7174b38ded7ba 455 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 9.7E-17 T 17-10-2018 IPR000362 Fumarate lyase family BJD13_08935 91f391894f85ffb13ab7174b38ded7ba 455 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 9.7E-17 T 17-10-2018 IPR000362 Fumarate lyase family BJD13_19105 5bb30b54613db80f2afb15eb46b1b67a 200 SMART SM00448 2 115 6.0E-29 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_19105 5bb30b54613db80f2afb15eb46b1b67a 200 Gene3D G3DSA:3.40.50.12740 2 200 1.4E-57 T 17-10-2018 BJD13_19105 5bb30b54613db80f2afb15eb46b1b67a 200 Pfam PF00196 Bacterial regulatory proteins, luxR family 139 194 2.1E-16 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_19105 5bb30b54613db80f2afb15eb46b1b67a 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 170 6.7E-10 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_19105 5bb30b54613db80f2afb15eb46b1b67a 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 182 6.7E-10 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_19105 5bb30b54613db80f2afb15eb46b1b67a 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 140 154 6.7E-10 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_19105 5bb30b54613db80f2afb15eb46b1b67a 200 SMART SM00421 137 194 3.6E-19 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_19105 5bb30b54613db80f2afb15eb46b1b67a 200 SUPERFAMILY SSF46894 128 200 4.42E-19 T 17-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BJD13_19105 5bb30b54613db80f2afb15eb46b1b67a 200 SUPERFAMILY SSF52172 1 128 7.26E-32 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_19105 5bb30b54613db80f2afb15eb46b1b67a 200 Pfam PF00072 Response regulator receiver domain 4 115 8.9E-25 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_22810 e4d369e82c0028d6b5da74c689f7a125 622 Gene3D G3DSA:1.10.287.950 300 603 3.9E-85 T 17-10-2018 BJD13_22810 e4d369e82c0028d6b5da74c689f7a125 622 Gene3D G3DSA:3.30.450.20 143 256 1.5E-17 T 17-10-2018 BJD13_22810 e4d369e82c0028d6b5da74c689f7a125 622 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 420 569 6.3E-54 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD13_22810 e4d369e82c0028d6b5da74c689f7a125 622 SMART SM00283 354 601 1.3E-90 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD13_22810 e4d369e82c0028d6b5da74c689f7a125 622 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 481 510 8.8E-56 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD13_22810 e4d369e82c0028d6b5da74c689f7a125 622 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 529 558 8.8E-56 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD13_22810 e4d369e82c0028d6b5da74c689f7a125 622 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 375 404 8.8E-56 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD13_22810 e4d369e82c0028d6b5da74c689f7a125 622 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 452 479 8.8E-56 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD13_22810 e4d369e82c0028d6b5da74c689f7a125 622 SUPERFAMILY SSF58104 321 605 2.62E-72 T 17-10-2018 BJD13_04535 c99da2d6a0d1614ee9903d8607e0a8d2 239 Pfam PF13489 Methyltransferase domain 50 207 2.6E-27 T 17-10-2018 BJD13_04535 c99da2d6a0d1614ee9903d8607e0a8d2 239 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 16 239 38.108 T 17-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 BJD13_04535 c99da2d6a0d1614ee9903d8607e0a8d2 239 Gene3D G3DSA:3.40.50.150 16 238 6.2E-80 T 17-10-2018 BJD13_04535 c99da2d6a0d1614ee9903d8607e0a8d2 239 SUPERFAMILY SSF53335 18 234 1.12E-52 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_04535 c99da2d6a0d1614ee9903d8607e0a8d2 239 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 16 233 2.5E-91 T 17-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 BJD13_20645 ae58b1a17772a4932d0b6a2bd26daea9 545 PRINTS PR01084 Na+/H+ exchanger signature 119 129 4.2E-5 T 17-10-2018 IPR004709 Na+/H+ exchanger GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 Reactome: R-HSA-425986 BJD13_20645 ae58b1a17772a4932d0b6a2bd26daea9 545 PRINTS PR01084 Na+/H+ exchanger signature 69 83 4.2E-5 T 17-10-2018 IPR004709 Na+/H+ exchanger GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 Reactome: R-HSA-425986 BJD13_20645 ae58b1a17772a4932d0b6a2bd26daea9 545 PRINTS PR01084 Na+/H+ exchanger signature 55 66 4.2E-5 T 17-10-2018 IPR004709 Na+/H+ exchanger GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 Reactome: R-HSA-425986 BJD13_20645 ae58b1a17772a4932d0b6a2bd26daea9 545 Pfam PF00999 Sodium/hydrogen exchanger family 11 419 5.6E-66 T 17-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 BJD13_20645 ae58b1a17772a4932d0b6a2bd26daea9 545 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 8 540 2.0E-123 T 17-10-2018 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 BJD13_02195 50c60f4e1ddc0d0508cb401da22b4b51 234 SUPERFAMILY SSF56784 12 226 1.39E-48 T 17-10-2018 IPR036412 HAD-like superfamily BJD13_02195 50c60f4e1ddc0d0508cb401da22b4b51 234 Gene3D G3DSA:1.10.150.240 27 93 3.2E-55 T 17-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BJD13_02195 50c60f4e1ddc0d0508cb401da22b4b51 234 Pfam PF13419 Haloacid dehalogenase-like hydrolase 16 191 1.6E-24 T 17-10-2018 BJD13_02195 50c60f4e1ddc0d0508cb401da22b4b51 234 Gene3D G3DSA:3.40.50.1000 16 210 3.2E-55 T 17-10-2018 IPR023214 HAD superfamily BJD13_02195 50c60f4e1ddc0d0508cb401da22b4b51 234 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 60 191 3.6E-17 T 17-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BJD13_15025 3ebc7464c101e642ac743e90ecdb3afc 301 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 71 224 4.4E-48 T 17-10-2018 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 BJD13_15025 3ebc7464c101e642ac743e90ecdb3afc 301 SUPERFAMILY SSF51197 81 230 2.25E-21 T 17-10-2018 BJD13_15025 3ebc7464c101e642ac743e90ecdb3afc 301 Gene3D G3DSA:2.60.120.330 45 228 1.6E-43 T 17-10-2018 IPR027443 Isopenicillin N synthase-like BJD13_11640 1a00b4e38d93b2682c3a46c27a13117f 693 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 6 36 8.4E-5 T 17-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal BJD13_11640 1a00b4e38d93b2682c3a46c27a13117f 693 Pfam PF05506 Domain of unknown function (DUF756) 501 586 1.9E-22 T 17-10-2018 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 BJD13_11640 1a00b4e38d93b2682c3a46c27a13117f 693 Pfam PF05506 Domain of unknown function (DUF756) 607 677 1.6E-11 T 17-10-2018 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 BJD13_11640 1a00b4e38d93b2682c3a46c27a13117f 693 SUPERFAMILY SSF53649 150 437 6.02E-6 T 17-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 BJD13_11640 1a00b4e38d93b2682c3a46c27a13117f 693 Gene3D G3DSA:3.40.720.10 184 480 1.7E-50 T 17-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 BJD13_11640 1a00b4e38d93b2682c3a46c27a13117f 693 Pfam PF04185 Phosphoesterase family 46 432 1.5E-106 T 17-10-2018 IPR007312 Phosphoesterase GO:0016788 BJD13_11640 1a00b4e38d93b2682c3a46c27a13117f 693 TIGRFAM TIGR03396 PC_PLC: phospholipase C, phosphocholine-specific 6 690 1.3E-268 T 17-10-2018 IPR017767 Bacterial phospholipase C, phosphocholine-specific GO:0034480 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 BJD13_04665 8234e9553d2ae7720bfa91c7064a0b86 203 Gene3D G3DSA:3.40.630.30 6 201 4.2E-41 T 17-10-2018 BJD13_04665 8234e9553d2ae7720bfa91c7064a0b86 203 SUPERFAMILY SSF55729 14 184 6.42E-33 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD13_04665 8234e9553d2ae7720bfa91c7064a0b86 203 Pfam PF13302 Acetyltransferase (GNAT) domain 23 159 3.4E-15 T 17-10-2018 IPR000182 GNAT domain BJD13_15505 2a6335c02eac0bc7f89d6aced8fee8ae 526 SUPERFAMILY SSF56235 3 526 2.12E-148 T 17-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BJD13_15505 2a6335c02eac0bc7f89d6aced8fee8ae 526 Gene3D G3DSA:3.60.20.40 341 526 5.5E-69 T 17-10-2018 BJD13_15505 2a6335c02eac0bc7f89d6aced8fee8ae 526 Pfam PF01019 Gamma-glutamyltranspeptidase 25 521 6.3E-125 T 17-10-2018 BJD13_15505 2a6335c02eac0bc7f89d6aced8fee8ae 526 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 395 410 3.9E-24 T 17-10-2018 BJD13_15505 2a6335c02eac0bc7f89d6aced8fee8ae 526 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 340 358 3.9E-24 T 17-10-2018 BJD13_15505 2a6335c02eac0bc7f89d6aced8fee8ae 526 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 120 139 3.9E-24 T 17-10-2018 BJD13_15505 2a6335c02eac0bc7f89d6aced8fee8ae 526 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 364 382 3.9E-24 T 17-10-2018 BJD13_15505 2a6335c02eac0bc7f89d6aced8fee8ae 526 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 219 235 3.9E-24 T 17-10-2018 BJD13_15505 2a6335c02eac0bc7f89d6aced8fee8ae 526 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 32 57 3.9E-24 T 17-10-2018 BJD13_15505 2a6335c02eac0bc7f89d6aced8fee8ae 526 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 101 119 3.9E-24 T 17-10-2018 BJD13_15505 2a6335c02eac0bc7f89d6aced8fee8ae 526 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 248 267 3.9E-24 T 17-10-2018 BJD13_15505 2a6335c02eac0bc7f89d6aced8fee8ae 526 Gene3D G3DSA:1.10.246.130 235 340 4.2E-12 T 17-10-2018 BJD13_02380 c9cc9981d86359cc95ba49db12cb51c9 213 Gene3D G3DSA:1.10.10.60 8 63 6.9E-23 T 17-10-2018 BJD13_02380 c9cc9981d86359cc95ba49db12cb51c9 213 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 151 205 5.2E-15 T 17-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type BJD13_02380 c9cc9981d86359cc95ba49db12cb51c9 213 SUPERFAMILY SSF46689 7 88 4.31E-22 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_02380 c9cc9981d86359cc95ba49db12cb51c9 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 5.5E-9 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD13_02380 c9cc9981d86359cc95ba49db12cb51c9 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 5.5E-9 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD13_02380 c9cc9981d86359cc95ba49db12cb51c9 213 Gene3D G3DSA:1.10.357.10 76 212 4.1E-26 T 17-10-2018 BJD13_02380 c9cc9981d86359cc95ba49db12cb51c9 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 65 1.4E-15 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD13_23240 c9b744746546b910459d26d64c6f2e48 236 Pfam PF01479 S4 domain 6 43 1.0E-7 T 17-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_23240 c9b744746546b910459d26d64c6f2e48 236 Gene3D G3DSA:3.30.2350.10 64 235 2.3E-25 T 17-10-2018 BJD13_23240 c9b744746546b910459d26d64c6f2e48 236 Gene3D G3DSA:3.10.290.10 3 63 5.8E-12 T 17-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 BJD13_23240 c9b744746546b910459d26d64c6f2e48 236 SMART SM00363 5 63 0.0015 T 17-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_23240 c9b744746546b910459d26d64c6f2e48 236 SUPERFAMILY SSF55174 5 78 1.03E-10 T 17-10-2018 BJD13_23240 c9b744746546b910459d26d64c6f2e48 236 SUPERFAMILY SSF55120 65 233 1.87E-19 T 17-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD13_22865 f3c9c595ad4f8c06859bc8474ac02e17 235 SUPERFAMILY SSF47616 105 231 1.74E-21 T 17-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily BJD13_22865 f3c9c595ad4f8c06859bc8474ac02e17 235 Pfam PF14497 Glutathione S-transferase, C-terminal domain 109 215 4.8E-27 T 17-10-2018 IPR004046 Glutathione S-transferase, C-terminal BJD13_22865 f3c9c595ad4f8c06859bc8474ac02e17 235 SUPERFAMILY SSF52833 1 81 1.86E-13 T 17-10-2018 IPR036249 Thioredoxin-like superfamily BJD13_22865 f3c9c595ad4f8c06859bc8474ac02e17 235 Gene3D G3DSA:1.20.1050.10 86 204 3.0E-90 T 17-10-2018 BJD13_22865 f3c9c595ad4f8c06859bc8474ac02e17 235 Gene3D G3DSA:3.40.30.10 3 233 3.0E-90 T 17-10-2018 BJD13_15325 1df7c46631084e6389be886bc42663a2 292 SUPERFAMILY SSF51735 6 257 3.54E-57 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_15325 1df7c46631084e6389be886bc42663a2 292 Pfam PF05368 NmrA-like family 8 227 6.3E-20 T 17-10-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 BJD13_15325 1df7c46631084e6389be886bc42663a2 292 Gene3D G3DSA:3.90.25.10 143 275 5.2E-82 T 17-10-2018 BJD13_15325 1df7c46631084e6389be886bc42663a2 292 Gene3D G3DSA:3.40.50.720 9 274 5.2E-82 T 17-10-2018 BJD13_03415 8388dae405b29e72c3107d88e60c4f92 358 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 47 271 2.4E-37 T 17-10-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 BJD13_09720 1c07648cb1b5e6d1474f805912e3d58c 115 Pfam PF01042 Endoribonuclease L-PSP 10 113 1.0E-23 T 17-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 BJD13_09720 1c07648cb1b5e6d1474f805912e3d58c 115 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 90 108 - T 17-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 BJD13_09720 1c07648cb1b5e6d1474f805912e3d58c 115 SUPERFAMILY SSF55298 3 114 1.23E-29 T 17-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 BJD13_09720 1c07648cb1b5e6d1474f805912e3d58c 115 Gene3D G3DSA:3.30.1330.40 1 115 3.6E-38 T 17-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 BJD13_10265 bde73ee903e8b426eb386780971771c1 561 Gene3D G3DSA:2.115.10.20 49 355 2.3E-93 T 17-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily BJD13_10265 bde73ee903e8b426eb386780971771c1 561 Gene3D G3DSA:2.60.120.200 376 561 8.2E-30 T 17-10-2018 BJD13_10265 bde73ee903e8b426eb386780971771c1 561 Pfam PF04616 Glycosyl hydrolases family 43 51 343 6.4E-99 T 17-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 BJD13_10265 bde73ee903e8b426eb386780971771c1 561 SUPERFAMILY SSF75005 51 360 8.57E-90 T 17-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily BJD13_10265 bde73ee903e8b426eb386780971771c1 561 SUPERFAMILY SSF49899 373 559 3.44E-32 T 17-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily BJD13_08205 fef6142553004d8b14ab9d5d65ed30c9 193 Pfam PF08281 Sigma-70, region 4 123 175 2.2E-11 T 17-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BJD13_08205 fef6142553004d8b14ab9d5d65ed30c9 193 Pfam PF04542 Sigma-70 region 2 30 93 3.5E-7 T 17-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BJD13_08205 fef6142553004d8b14ab9d5d65ed30c9 193 Gene3D G3DSA:1.10.10.10 121 179 2.2E-16 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_08205 fef6142553004d8b14ab9d5d65ed30c9 193 SUPERFAMILY SSF88946 6 115 5.1E-21 T 17-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BJD13_08205 fef6142553004d8b14ab9d5d65ed30c9 193 Gene3D G3DSA:1.10.1740.10 5 120 1.2E-19 T 17-10-2018 BJD13_08205 fef6142553004d8b14ab9d5d65ed30c9 193 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 25 178 8.5E-20 T 17-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BJD13_08205 fef6142553004d8b14ab9d5d65ed30c9 193 SUPERFAMILY SSF88659 115 179 5.23E-15 T 17-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BJD13_23185 7b187ae3226edb50430434581e0cd7e5 272 Pfam PF16331 TolA binding protein trimerisation 26 99 1.2E-18 T 17-10-2018 IPR032519 YbgF, trimerisation domain GO:0070206 BJD13_23185 7b187ae3226edb50430434581e0cd7e5 272 Pfam PF13525 Outer membrane lipoprotein 144 266 2.4E-13 T 17-10-2018 IPR039565 Outer membrane lipoprotein BamD-like BJD13_23185 7b187ae3226edb50430434581e0cd7e5 272 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 2 265 19.926 T 17-10-2018 IPR034706 Cell division coordinator CpoB GO:0051301 BJD13_23185 7b187ae3226edb50430434581e0cd7e5 272 Gene3D G3DSA:1.25.40.10 145 272 7.3E-36 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_23185 7b187ae3226edb50430434581e0cd7e5 272 SUPERFAMILY SSF48452 144 259 9.28E-15 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_23185 7b187ae3226edb50430434581e0cd7e5 272 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 145 262 2.4E-40 T 17-10-2018 IPR014162 Cell division coordinator CpoB, C-terminal BJD13_19765 228529febb0ba8b7a2a0f60c15a24e7a 294 Gene3D G3DSA:3.30.1150.10 113 227 2.0E-12 T 17-10-2018 BJD13_19765 228529febb0ba8b7a2a0f60c15a24e7a 294 SUPERFAMILY SSF74653 135 207 3.01E-7 T 17-10-2018 BJD13_23745 2cea475a934b253e313c68a225bed227 220 SUPERFAMILY SSF101874 24 192 2.75E-46 T 17-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily BJD13_23745 2cea475a934b253e313c68a225bed227 220 Gene3D G3DSA:2.40.128.110 25 194 2.4E-45 T 17-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily BJD13_23745 2cea475a934b253e313c68a225bed227 220 Pfam PF04264 YceI-like domain 27 190 1.0E-36 T 17-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like BJD13_23745 2cea475a934b253e313c68a225bed227 220 SMART SM00867 26 191 1.8E-51 T 17-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like BJD13_18335 a1e84adfb63e32543b041e3f92c9d540 346 Pfam PF06996 Type VI secretion, TssG 27 328 9.0E-96 T 17-10-2018 IPR010732 Type VI secretion, TssG-like BJD13_18335 a1e84adfb63e32543b041e3f92c9d540 346 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 27 328 5.9E-104 T 17-10-2018 IPR010732 Type VI secretion, TssG-like BJD13_16785 5e49ab1c075a9d17fe5ea3354313bf21 289 Gene3D G3DSA:3.40.50.720 4 267 2.8E-57 T 17-10-2018 BJD13_16785 5e49ab1c075a9d17fe5ea3354313bf21 289 Pfam PF05368 NmrA-like family 3 222 2.0E-30 T 17-10-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 BJD13_16785 5e49ab1c075a9d17fe5ea3354313bf21 289 SUPERFAMILY SSF51735 3 259 2.45E-51 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_16785 5e49ab1c075a9d17fe5ea3354313bf21 289 Gene3D G3DSA:3.90.25.10 134 259 2.8E-57 T 17-10-2018 BJD13_11750 d09dbf45d5693efcdb25c6943974358d 609 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 140 9.3E-25 T 17-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BJD13_11750 d09dbf45d5693efcdb25c6943974358d 609 Pfam PF00679 Elongation factor G C-terminus 401 480 6.0E-23 T 17-10-2018 IPR000640 Elongation factor EFG, domain V-like BJD13_11750 d09dbf45d5693efcdb25c6943974358d 609 Pfam PF00009 Elongation factor Tu GTP binding domain 5 195 1.8E-54 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD13_11750 d09dbf45d5693efcdb25c6943974358d 609 SUPERFAMILY SSF54980 403 516 8.63E-26 T 17-10-2018 IPR035647 EF-G domain III/V-like BJD13_11750 d09dbf45d5693efcdb25c6943974358d 609 Gene3D G3DSA:3.30.70.240 394 487 4.6E-123 T 17-10-2018 BJD13_11750 d09dbf45d5693efcdb25c6943974358d 609 Gene3D G3DSA:2.40.30.10 200 300 1.9E-33 T 17-10-2018 BJD13_11750 d09dbf45d5693efcdb25c6943974358d 609 SUPERFAMILY SSF54980 303 392 1.15E-14 T 17-10-2018 IPR035647 EF-G domain III/V-like BJD13_11750 d09dbf45d5693efcdb25c6943974358d 609 Pfam PF03144 Elongation factor Tu domain 2 220 290 5.1E-10 T 17-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 BJD13_11750 d09dbf45d5693efcdb25c6943974358d 609 Gene3D G3DSA:3.40.50.300 2 199 1.6E-65 T 17-10-2018 BJD13_11750 d09dbf45d5693efcdb25c6943974358d 609 PRINTS PR00315 GTP-binding elongation factor signature 52 60 5.6E-13 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD13_11750 d09dbf45d5693efcdb25c6943974358d 609 PRINTS PR00315 GTP-binding elongation factor signature 124 133 5.6E-13 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD13_11750 d09dbf45d5693efcdb25c6943974358d 609 PRINTS PR00315 GTP-binding elongation factor signature 72 82 5.6E-13 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD13_11750 d09dbf45d5693efcdb25c6943974358d 609 PRINTS PR00315 GTP-binding elongation factor signature 8 21 5.6E-13 T 17-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BJD13_11750 d09dbf45d5693efcdb25c6943974358d 609 SMART SM00838 400 488 1.6E-4 T 17-10-2018 IPR000640 Elongation factor EFG, domain V-like BJD13_11750 d09dbf45d5693efcdb25c6943974358d 609 Gene3D G3DSA:2.40.50.250 488 604 4.6E-123 T 17-10-2018 BJD13_11750 d09dbf45d5693efcdb25c6943974358d 609 SUPERFAMILY SSF50447 152 300 1.39E-33 T 17-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BJD13_11750 d09dbf45d5693efcdb25c6943974358d 609 SUPERFAMILY SSF52540 3 208 7.34E-58 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_11750 d09dbf45d5693efcdb25c6943974358d 609 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 6 604 1.3E-280 T 17-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 BJD13_11750 d09dbf45d5693efcdb25c6943974358d 609 Gene3D G3DSA:3.30.70.870 307 595 4.6E-123 T 17-10-2018 BJD13_11750 d09dbf45d5693efcdb25c6943974358d 609 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 45 60 - T 17-10-2018 IPR031157 Tr-type G domain, conserved site BJD13_19355 99183f3d5b06d9f204d7815e844daedd 375 Pfam PF01757 Acyltransferase family 4 345 3.6E-23 T 17-10-2018 IPR002656 Acyltransferase 3 GO:0016747 BJD13_03825 062bace5f32b6ffafd2998ab2600d0ce 770 SUPERFAMILY SSF53474 510 752 2.01E-41 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_03825 062bace5f32b6ffafd2998ab2600d0ce 770 Gene3D G3DSA:3.40.50.1820 505 759 2.3E-40 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_03825 062bace5f32b6ffafd2998ab2600d0ce 770 Pfam PF00326 Prolyl oligopeptidase family 555 751 3.5E-42 T 17-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 BJD13_03825 062bace5f32b6ffafd2998ab2600d0ce 770 SUPERFAMILY SSF82171 169 501 1.44E-34 T 17-10-2018 BJD13_03825 062bace5f32b6ffafd2998ab2600d0ce 770 Gene3D G3DSA:2.140.10.30 142 490 2.0E-78 T 17-10-2018 IPR038554 Dipeptidylpeptidase IV, N-terminal domain superfamily BJD13_03825 062bace5f32b6ffafd2998ab2600d0ce 770 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 170 473 4.8E-45 T 17-10-2018 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 BJD13_08400 9ffe5d9f2e227c25b69adf316bea89e0 401 SUPERFAMILY SSF51338 2 400 2.81E-30 T 17-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BJD13_08400 9ffe5d9f2e227c25b69adf316bea89e0 401 SUPERFAMILY SSF51556 64 361 5.63E-82 T 17-10-2018 IPR032466 Metal-dependent hydrolase BJD13_08400 9ffe5d9f2e227c25b69adf316bea89e0 401 Pfam PF07969 Amidohydrolase family 113 378 3.2E-14 T 17-10-2018 IPR013108 Amidohydrolase 3 BJD13_08400 9ffe5d9f2e227c25b69adf316bea89e0 401 Hamap MF_00372 Imidazolonepropionase [hutI]. 4 401 40.916 T 17-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BJD13_08400 9ffe5d9f2e227c25b69adf316bea89e0 401 Gene3D G3DSA:3.20.20.140 65 361 3.2E-166 T 17-10-2018 BJD13_08400 9ffe5d9f2e227c25b69adf316bea89e0 401 TIGRFAM TIGR01224 hutI: imidazolonepropionase 26 399 1.3E-137 T 17-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BJD13_08400 9ffe5d9f2e227c25b69adf316bea89e0 401 Gene3D G3DSA:2.30.40.10 9 398 3.2E-166 T 17-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BJD13_10380 4f5022a9a4a649f49c0741c7a116d5a4 530 PRINTS PR01806 Virulence factor MviN signature 50 66 8.3E-71 T 17-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ BJD13_10380 4f5022a9a4a649f49c0741c7a116d5a4 530 PRINTS PR01806 Virulence factor MviN signature 355 374 8.3E-71 T 17-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ BJD13_10380 4f5022a9a4a649f49c0741c7a116d5a4 530 PRINTS PR01806 Virulence factor MviN signature 31 50 8.3E-71 T 17-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ BJD13_10380 4f5022a9a4a649f49c0741c7a116d5a4 530 PRINTS PR01806 Virulence factor MviN signature 430 447 8.3E-71 T 17-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ BJD13_10380 4f5022a9a4a649f49c0741c7a116d5a4 530 PRINTS PR01806 Virulence factor MviN signature 257 283 8.3E-71 T 17-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ BJD13_10380 4f5022a9a4a649f49c0741c7a116d5a4 530 PRINTS PR01806 Virulence factor MviN signature 155 176 8.3E-71 T 17-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ BJD13_10380 4f5022a9a4a649f49c0741c7a116d5a4 530 PRINTS PR01806 Virulence factor MviN signature 131 155 8.3E-71 T 17-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ BJD13_10380 4f5022a9a4a649f49c0741c7a116d5a4 530 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 5 512 1.3E-118 T 17-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ BJD13_10380 4f5022a9a4a649f49c0741c7a116d5a4 530 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 1 488 19.413 T 17-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ BJD13_10380 4f5022a9a4a649f49c0741c7a116d5a4 530 PIRSF PIRSF002869 1 529 2.5E-142 T 17-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ BJD13_10380 4f5022a9a4a649f49c0741c7a116d5a4 530 Pfam PF03023 MviN-like protein 26 492 4.2E-121 T 17-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ BJD13_14565 e0c73c04dbdae7c192dae8dac4a4faf2 942 Pfam PF00361 Proton-conducting membrane transporter 128 415 6.2E-66 T 17-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_14565 e0c73c04dbdae7c192dae8dac4a4faf2 942 Pfam PF13244 Domain of unknown function (DUF4040) 611 675 7.1E-18 T 17-10-2018 IPR025383 Domain of unknown function DUF4040 BJD13_14565 e0c73c04dbdae7c192dae8dac4a4faf2 942 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 788 907 1.6E-29 T 17-10-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein BJD13_14565 e0c73c04dbdae7c192dae8dac4a4faf2 942 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 64 115 3.1E-10 T 17-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_14565 e0c73c04dbdae7c192dae8dac4a4faf2 942 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 105 125 2.6E-38 T 17-10-2018 BJD13_14565 e0c73c04dbdae7c192dae8dac4a4faf2 942 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 77 102 2.6E-38 T 17-10-2018 BJD13_14565 e0c73c04dbdae7c192dae8dac4a4faf2 942 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 240 266 2.6E-38 T 17-10-2018 BJD13_14565 e0c73c04dbdae7c192dae8dac4a4faf2 942 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 152 173 2.6E-38 T 17-10-2018 BJD13_14565 e0c73c04dbdae7c192dae8dac4a4faf2 942 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 308 320 2.6E-38 T 17-10-2018 BJD13_14565 e0c73c04dbdae7c192dae8dac4a4faf2 942 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 218 239 2.6E-38 T 17-10-2018 BJD13_14565 e0c73c04dbdae7c192dae8dac4a4faf2 942 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 417 436 2.6E-38 T 17-10-2018 BJD13_07080 7d5a4e13e31b4d38fe9adbb9ecd14857 82 SUPERFAMILY SSF50037 3 76 1.08E-13 T 17-10-2018 IPR008988 Transcriptional repressor, C-terminal BJD13_07080 7d5a4e13e31b4d38fe9adbb9ecd14857 82 Gene3D G3DSA:2.30.30.90 1 79 1.6E-24 T 17-10-2018 IPR038157 Ferrous iron transporter, core domain BJD13_07080 7d5a4e13e31b4d38fe9adbb9ecd14857 82 Pfam PF04023 FeoA domain 1 76 2.9E-18 T 17-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 BJD13_07080 7d5a4e13e31b4d38fe9adbb9ecd14857 82 SMART SM00899 1 77 1.3E-17 T 17-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 BJD13_08630 cbb631238a44b0f5ced87e3bbce08b4f 258 Gene3D G3DSA:3.40.50.10330 29 235 7.6E-40 T 17-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 BJD13_08630 cbb631238a44b0f5ced87e3bbce08b4f 258 SUPERFAMILY SSF111331 28 245 1.83E-55 T 17-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily BJD13_08630 cbb631238a44b0f5ced87e3bbce08b4f 258 Gene3D G3DSA:2.60.200.30 98 233 7.6E-40 T 17-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 BJD13_08630 cbb631238a44b0f5ced87e3bbce08b4f 258 Hamap MF_00361 NAD kinase [nadK]. 5 257 21.653 T 17-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 BJD13_08630 cbb631238a44b0f5ced87e3bbce08b4f 258 Pfam PF01513 ATP-NAD kinase 18 220 5.1E-17 T 17-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 BJD13_00125 fcccd7ad78de1aab18860a8c43dc679e 284 Gene3D G3DSA:3.30.420.10 117 260 3.0E-14 T 17-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BJD13_00125 fcccd7ad78de1aab18860a8c43dc679e 284 SUPERFAMILY SSF53098 112 278 4.55E-41 T 17-10-2018 IPR012337 Ribonuclease H-like superfamily BJD13_00125 fcccd7ad78de1aab18860a8c43dc679e 284 Pfam PF13276 HTH-like domain 38 91 6.7E-14 T 17-10-2018 IPR025948 HTH-like domain BJD13_00125 fcccd7ad78de1aab18860a8c43dc679e 284 Pfam PF00665 Integrase core domain 119 233 4.9E-32 T 17-10-2018 IPR001584 Integrase, catalytic core GO:0015074 BJD13_02570 03be37f5701a10b87c0e96771f3f7408 280 Gene3D G3DSA:3.20.20.410 10 277 4.7E-46 T 17-10-2018 IPR036520 UPF0759 superfamily BJD13_02570 03be37f5701a10b87c0e96771f3f7408 280 SUPERFAMILY SSF117396 15 273 1.57E-63 T 17-10-2018 IPR036520 UPF0759 superfamily BJD13_02570 03be37f5701a10b87c0e96771f3f7408 280 Pfam PF01904 Protein of unknown function DUF72 33 272 7.4E-53 T 17-10-2018 IPR002763 Protein of unknown function DUF72 BJD13_09280 a9e12b9c98b82b0d411b061e9cc6ff1f 716 Gene3D G3DSA:1.10.1370.40 49 693 1.2E-242 T 17-10-2018 BJD13_09280 a9e12b9c98b82b0d411b061e9cc6ff1f 716 Gene3D G3DSA:1.10.1370.10 160 631 1.2E-242 T 17-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 BJD13_09280 a9e12b9c98b82b0d411b061e9cc6ff1f 716 SUPERFAMILY SSF55486 27 698 3.62E-176 T 17-10-2018 BJD13_09280 a9e12b9c98b82b0d411b061e9cc6ff1f 716 Pfam PF01432 Peptidase family M3 244 698 2.7E-131 T 17-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 BJD13_11675 092c31473fc38fc4a74c02536571bd15 286 SUPERFAMILY SSF161098 24 274 4.45E-56 T 17-10-2018 IPR035906 MetI-like superfamily BJD13_11675 092c31473fc38fc4a74c02536571bd15 286 Gene3D G3DSA:1.10.3720.10 23 283 1.5E-69 T 17-10-2018 IPR035906 MetI-like superfamily BJD13_11675 092c31473fc38fc4a74c02536571bd15 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 278 1.6E-26 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD13_11675 092c31473fc38fc4a74c02536571bd15 286 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 17 280 3.2E-126 T 17-10-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 BJD13_11675 092c31473fc38fc4a74c02536571bd15 286 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 15 277 1.4E-97 T 17-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 BJD13_13705 eaa137c6d30c83e1925a3e9a68276abc 303 Gene3D G3DSA:1.20.58.340 246 303 6.5E-15 T 17-10-2018 BJD13_13705 eaa137c6d30c83e1925a3e9a68276abc 303 Gene3D G3DSA:1.20.58.340 114 244 2.3E-5 T 17-10-2018 BJD13_13705 eaa137c6d30c83e1925a3e9a68276abc 303 SUPERFAMILY SSF144083 238 300 6.28E-17 T 17-10-2018 BJD13_13705 eaa137c6d30c83e1925a3e9a68276abc 303 SUPERFAMILY SSF143865 12 236 6.93E-30 T 17-10-2018 BJD13_13705 eaa137c6d30c83e1925a3e9a68276abc 303 Pfam PF01544 CorA-like Mg2+ transporter protein 16 299 4.3E-53 T 17-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 BJD13_13705 eaa137c6d30c83e1925a3e9a68276abc 303 Gene3D G3DSA:3.30.460.20 2 109 3.6E-7 T 17-10-2018 BJD13_14675 9523ad81df9306709241e469daf0cb39 430 SUPERFAMILY SSF52540 81 366 5.47E-67 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_14675 9523ad81df9306709241e469daf0cb39 430 SMART SM00487 24 227 1.8E-52 T 17-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BJD13_14675 9523ad81df9306709241e469daf0cb39 430 SMART SM00490 263 344 6.8E-29 T 17-10-2018 IPR001650 Helicase, C-terminal BJD13_14675 9523ad81df9306709241e469daf0cb39 430 Gene3D G3DSA:3.40.50.300 219 377 3.0E-45 T 17-10-2018 BJD13_14675 9523ad81df9306709241e469daf0cb39 430 Pfam PF00270 DEAD/DEAH box helicase 29 198 1.5E-42 T 17-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BJD13_14675 9523ad81df9306709241e469daf0cb39 430 Gene3D G3DSA:3.40.50.300 3 213 3.5E-66 T 17-10-2018 BJD13_14675 9523ad81df9306709241e469daf0cb39 430 Pfam PF00271 Helicase conserved C-terminal domain 239 344 4.8E-26 T 17-10-2018 IPR001650 Helicase, C-terminal BJD13_14675 9523ad81df9306709241e469daf0cb39 430 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 158 166 - T 17-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site BJD13_01685 8b44527ca4421c3ba12958a7f8ac1def 254 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 222 234 4.5E-9 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_01685 8b44527ca4421c3ba12958a7f8ac1def 254 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 192 206 4.5E-9 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_01685 8b44527ca4421c3ba12958a7f8ac1def 254 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 206 222 4.5E-9 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_01685 8b44527ca4421c3ba12958a7f8ac1def 254 Gene3D G3DSA:1.10.10.10 189 254 2.7E-20 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_01685 8b44527ca4421c3ba12958a7f8ac1def 254 Gene3D G3DSA:3.30.450.80 8 183 1.2E-18 T 17-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily BJD13_01685 8b44527ca4421c3ba12958a7f8ac1def 254 SMART SM00421 189 246 3.4E-18 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_01685 8b44527ca4421c3ba12958a7f8ac1def 254 SUPERFAMILY SSF75516 7 183 2.09E-30 T 17-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily BJD13_01685 8b44527ca4421c3ba12958a7f8ac1def 254 Pfam PF00196 Bacterial regulatory proteins, luxR family 192 244 4.7E-18 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_01685 8b44527ca4421c3ba12958a7f8ac1def 254 ProSitePatterns PS00622 LuxR-type HTH domain signature. 206 233 - T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_01685 8b44527ca4421c3ba12958a7f8ac1def 254 SUPERFAMILY SSF46894 176 252 4.76E-19 T 17-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BJD13_01685 8b44527ca4421c3ba12958a7f8ac1def 254 Pfam PF03472 Autoinducer binding domain 23 175 3.9E-23 T 17-10-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain BJD13_11815 147401c8823158612e31d07ee53431b0 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 17-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_11815 147401c8823158612e31d07ee53431b0 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 2.7E-30 T 17-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_11815 147401c8823158612e31d07ee53431b0 118 Gene3D G3DSA:1.10.8.50 1 71 1.7E-27 T 17-10-2018 BJD13_11815 147401c8823158612e31d07ee53431b0 118 SUPERFAMILY SSF46946 2 114 2.94E-43 T 17-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 BJD13_11815 147401c8823158612e31d07ee53431b0 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 26.773 T 17-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_11815 147401c8823158612e31d07ee53431b0 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 5.2E-51 T 17-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_11815 147401c8823158612e31d07ee53431b0 118 Gene3D G3DSA:4.10.910.10 72 118 1.9E-24 T 17-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_11815 147401c8823158612e31d07ee53431b0 118 PIRSF PIRSF002134 1 118 1.3E-41 T 17-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_01420 4758b652d0c0669db19b17cc2b2d58c9 212 PIRSF PIRSF009320 1 211 1.7E-53 T 17-10-2018 BJD13_01420 4758b652d0c0669db19b17cc2b2d58c9 212 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 178 2.2E-15 T 17-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain BJD13_01420 4758b652d0c0669db19b17cc2b2d58c9 212 SUPERFAMILY SSF52540 1 204 4.64E-41 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_01420 4758b652d0c0669db19b17cc2b2d58c9 212 Gene3D G3DSA:3.40.50.300 1 204 3.4E-49 T 17-10-2018 BJD13_06085 5ab53f1682e93d5bd5f9da5c261f3202 258 SUPERFAMILY SSF53790 11 239 6.54E-60 T 17-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 BJD13_06085 5ab53f1682e93d5bd5f9da5c261f3202 258 Gene3D G3DSA:3.40.1010.10 8 123 3.4E-32 T 17-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 BJD13_06085 5ab53f1682e93d5bd5f9da5c261f3202 258 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 10 237 2.5E-67 T 17-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 BJD13_06085 5ab53f1682e93d5bd5f9da5c261f3202 258 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 14 28 - T 17-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 BJD13_06085 5ab53f1682e93d5bd5f9da5c261f3202 258 Gene3D G3DSA:3.30.950.10 124 241 4.4E-28 T 17-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 BJD13_06085 5ab53f1682e93d5bd5f9da5c261f3202 258 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 11 217 1.8E-41 T 17-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 BJD13_23775 6034e0cbbea5875cb09b95d88775f763 473 Gene3D G3DSA:1.20.1720.10 17 225 2.9E-47 T 17-10-2018 BJD13_23775 6034e0cbbea5875cb09b95d88775f763 473 SUPERFAMILY SSF103473 13 466 1.44E-60 T 17-10-2018 IPR036259 MFS transporter superfamily BJD13_23775 6034e0cbbea5875cb09b95d88775f763 473 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 20 420 1.3E-73 T 17-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 BJD13_23775 6034e0cbbea5875cb09b95d88775f763 473 PRINTS PR01036 Tetracycline resistance protein TetB signature 20 44 3.4E-10 T 17-10-2018 BJD13_23775 6034e0cbbea5875cb09b95d88775f763 473 PRINTS PR01036 Tetracycline resistance protein TetB signature 403 422 3.4E-10 T 17-10-2018 BJD13_23775 6034e0cbbea5875cb09b95d88775f763 473 PRINTS PR01036 Tetracycline resistance protein TetB signature 206 224 3.4E-10 T 17-10-2018 BJD13_23775 6034e0cbbea5875cb09b95d88775f763 473 PRINTS PR01036 Tetracycline resistance protein TetB signature 141 165 3.4E-10 T 17-10-2018 BJD13_23775 6034e0cbbea5875cb09b95d88775f763 473 PRINTS PR01036 Tetracycline resistance protein TetB signature 111 131 3.4E-10 T 17-10-2018 BJD13_23775 6034e0cbbea5875cb09b95d88775f763 473 Gene3D G3DSA:1.20.1250.20 268 472 4.9E-15 T 17-10-2018 BJD13_23775 6034e0cbbea5875cb09b95d88775f763 473 Pfam PF07690 Major Facilitator Superfamily 22 389 1.4E-40 T 17-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD13_14610 508c98a11f36e2833ff1a7a2304ebe55 130 Gene3D G3DSA:3.40.960.10 20 116 5.2E-30 T 17-10-2018 BJD13_14610 508c98a11f36e2833ff1a7a2304ebe55 130 SUPERFAMILY SSF52980 9 126 2.95E-22 T 17-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 BJD13_14610 508c98a11f36e2833ff1a7a2304ebe55 130 Pfam PF04480 Protein of unknown function (DUF559) 12 113 8.5E-39 T 17-10-2018 IPR007569 Protein of unknown function DUF559 BJD13_05095 28f72d91942d1cee3c8f07cf1b59d194 542 SUPERFAMILY SSF103473 19 401 6.67E-50 T 17-10-2018 IPR036259 MFS transporter superfamily BJD13_05095 28f72d91942d1cee3c8f07cf1b59d194 542 Gene3D G3DSA:1.20.1250.20 15 403 1.4E-42 T 17-10-2018 BJD13_05095 28f72d91942d1cee3c8f07cf1b59d194 542 Pfam PF05977 Transmembrane secretion effector 11 527 3.1E-182 T 17-10-2018 IPR010290 Transmembrane secretion effector BJD13_16035 1796a91ac6520288b9d1dcf30a0b1ce7 469 Pfam PF00120 Glutamine synthetase, catalytic domain 102 466 6.0E-131 T 17-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BJD13_16035 1796a91ac6520288b9d1dcf30a0b1ce7 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 467 1.8E-193 T 17-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BJD13_16035 1796a91ac6520288b9d1dcf30a0b1ce7 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 17-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 BJD13_16035 1796a91ac6520288b9d1dcf30a0b1ce7 469 Gene3D G3DSA:3.30.590.10 105 457 6.3E-140 T 17-10-2018 BJD13_16035 1796a91ac6520288b9d1dcf30a0b1ce7 469 SMART SM01230 102 379 4.7E-138 T 17-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BJD13_16035 1796a91ac6520288b9d1dcf30a0b1ce7 469 SUPERFAMILY SSF55931 102 467 3.24E-131 T 17-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 BJD13_16035 1796a91ac6520288b9d1dcf30a0b1ce7 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 4.6E-29 T 17-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 BJD13_16035 1796a91ac6520288b9d1dcf30a0b1ce7 469 Gene3D G3DSA:3.10.20.70 2 104 1.9E-37 T 17-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BJD13_16035 1796a91ac6520288b9d1dcf30a0b1ce7 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 17-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 BJD13_16035 1796a91ac6520288b9d1dcf30a0b1ce7 469 SUPERFAMILY SSF54368 3 100 1.14E-35 T 17-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BJD13_16160 7bd6c2f52f0096d690785d9db486977b 245 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD13_16160 7bd6c2f52f0096d690785d9db486977b 245 Gene3D G3DSA:3.40.50.300 3 245 3.3E-69 T 17-10-2018 BJD13_16160 7bd6c2f52f0096d690785d9db486977b 245 SMART SM00382 26 220 6.1E-13 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_16160 7bd6c2f52f0096d690785d9db486977b 245 SUPERFAMILY SSF52540 1 237 9.54E-68 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_16160 7bd6c2f52f0096d690785d9db486977b 245 Pfam PF00005 ABC transporter 17 162 3.4E-33 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD13_07005 ae342e62121e66da6d11f6cc61a316bb 315 Pfam PF04397 LytTr DNA-binding domain 208 300 5.5E-25 T 17-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 BJD13_07005 ae342e62121e66da6d11f6cc61a316bb 315 Gene3D G3DSA:2.40.50.40 199 264 3.7E-12 T 17-10-2018 BJD13_07005 ae342e62121e66da6d11f6cc61a316bb 315 SMART SM00850 205 302 4.1E-32 T 17-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 BJD13_07005 ae342e62121e66da6d11f6cc61a316bb 315 PIRSF PIRSF031767 10 315 1.1E-128 T 17-10-2018 IPR012379 LytTR MHYE transcriptional regulator, putative BJD13_04470 2bc0f4577064c994e8b040c492e652d0 458 SMART SM00490 255 336 3.3E-29 T 17-10-2018 IPR001650 Helicase, C-terminal BJD13_04470 2bc0f4577064c994e8b040c492e652d0 458 Pfam PF00270 DEAD/DEAH box helicase 26 192 1.3E-44 T 17-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BJD13_04470 2bc0f4577064c994e8b040c492e652d0 458 Gene3D G3DSA:3.40.50.300 1 209 2.5E-69 T 17-10-2018 BJD13_04470 2bc0f4577064c994e8b040c492e652d0 458 Gene3D G3DSA:3.30.70.330 387 458 2.0E-19 T 17-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily BJD13_04470 2bc0f4577064c994e8b040c492e652d0 458 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 151 159 - T 17-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site BJD13_04470 2bc0f4577064c994e8b040c492e652d0 458 Gene3D G3DSA:3.40.50.300 214 386 3.3E-45 T 17-10-2018 BJD13_04470 2bc0f4577064c994e8b040c492e652d0 458 Pfam PF00271 Helicase conserved C-terminal domain 237 336 6.6E-28 T 17-10-2018 IPR001650 Helicase, C-terminal BJD13_04470 2bc0f4577064c994e8b040c492e652d0 458 Pfam PF03880 DbpA RNA binding domain 386 456 9.4E-23 T 17-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain BJD13_04470 2bc0f4577064c994e8b040c492e652d0 458 SUPERFAMILY SSF52540 71 352 3.1E-69 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_04470 2bc0f4577064c994e8b040c492e652d0 458 SMART SM00487 21 219 2.7E-55 T 17-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BJD13_14710 866bd37a218c0a398fed89bee0115b8a 502 Pfam PF02321 Outer membrane efflux protein 65 261 3.3E-20 T 17-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 BJD13_14710 866bd37a218c0a398fed89bee0115b8a 502 Pfam PF02321 Outer membrane efflux protein 293 463 5.1E-22 T 17-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 BJD13_14710 866bd37a218c0a398fed89bee0115b8a 502 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 11 474 2.7E-93 T 17-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 BJD13_14710 866bd37a218c0a398fed89bee0115b8a 502 Gene3D G3DSA:1.20.1600.10 55 475 1.4E-115 T 17-10-2018 BJD13_14710 866bd37a218c0a398fed89bee0115b8a 502 SUPERFAMILY SSF56954 3 476 3.4E-100 T 17-10-2018 BJD13_14710 866bd37a218c0a398fed89bee0115b8a 502 Gene3D G3DSA:2.20.200.10 102 363 1.4E-115 T 17-10-2018 BJD13_10590 d4d8df24de4c1f31b8ed9b080acb3862 417 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 8 369 7.2E-64 T 17-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 BJD13_10590 d4d8df24de4c1f31b8ed9b080acb3862 417 SUPERFAMILY SSF103473 8 400 1.96E-61 T 17-10-2018 IPR036259 MFS transporter superfamily BJD13_10590 d4d8df24de4c1f31b8ed9b080acb3862 417 Pfam PF07690 Major Facilitator Superfamily 18 352 6.1E-44 T 17-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD13_10590 d4d8df24de4c1f31b8ed9b080acb3862 417 Gene3D G3DSA:1.20.1720.10 11 392 5.1E-99 T 17-10-2018 BJD13_08475 5982975a21432c6022dff8ec409a1f30 1167 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1157 0.0 T 17-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 BJD13_08475 5982975a21432c6022dff8ec409a1f30 1167 SUPERFAMILY SSF52540 1 1159 2.28E-63 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_08475 5982975a21432c6022dff8ec409a1f30 1167 PIRSF PIRSF005719 1 1165 4.3E-265 T 17-10-2018 IPR024704 Structural maintenance of chromosomes protein BJD13_08475 5982975a21432c6022dff8ec409a1f30 1167 Gene3D G3DSA:3.40.50.300 1 226 6.3E-53 T 17-10-2018 BJD13_08475 5982975a21432c6022dff8ec409a1f30 1167 SMART SM00968 521 619 3.6E-5 T 17-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 BJD13_08475 5982975a21432c6022dff8ec409a1f30 1167 SUPERFAMILY SSF75553 485 668 1.96E-9 T 17-10-2018 IPR036277 SMCs flexible hinge superfamily GO:0005515|GO:0005524|GO:0005694|GO:0051276 BJD13_08475 5982975a21432c6022dff8ec409a1f30 1167 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1159 23.278 T 17-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 BJD13_08475 5982975a21432c6022dff8ec409a1f30 1167 Gene3D G3DSA:3.40.50.300 1005 1166 6.8E-45 T 17-10-2018 BJD13_08475 5982975a21432c6022dff8ec409a1f30 1167 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1150 2.8E-67 T 17-10-2018 IPR003395 RecF/RecN/SMC, N-terminal BJD13_08475 5982975a21432c6022dff8ec409a1f30 1167 SUPERFAMILY SSF57997 658 857 2.55E-5 T 17-10-2018 BJD13_11135 0c0083946b2890425dddc8875bc6cae2 317 Gene3D G3DSA:3.40.50.300 10 213 3.7E-44 T 17-10-2018 BJD13_11135 0c0083946b2890425dddc8875bc6cae2 317 SMART SM00382 46 187 0.0059 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_11135 0c0083946b2890425dddc8875bc6cae2 317 Gene3D G3DSA:1.10.8.300 214 314 8.0E-25 T 17-10-2018 BJD13_11135 0c0083946b2890425dddc8875bc6cae2 317 SUPERFAMILY SSF52540 20 292 5.4E-38 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_11135 0c0083946b2890425dddc8875bc6cae2 317 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 49 179 1.7E-63 T 17-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 BJD13_11135 0c0083946b2890425dddc8875bc6cae2 317 PIRSF PIRSF002849 1 317 1.0E-120 T 17-10-2018 BJD13_20350 5f5917cad5888fde75ea6ed28006f2f9 133 Pfam PF01042 Endoribonuclease L-PSP 13 126 6.7E-21 T 17-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 BJD13_20350 5f5917cad5888fde75ea6ed28006f2f9 133 Gene3D G3DSA:3.30.1330.40 1 130 1.4E-35 T 17-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 BJD13_20350 5f5917cad5888fde75ea6ed28006f2f9 133 SUPERFAMILY SSF55298 8 129 2.04E-32 T 17-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 BJD13_19560 fff866e82f4f7957de18797169f5e616 526 Gene3D G3DSA:3.40.30.10 46 180 2.7E-23 T 17-10-2018 BJD13_19560 fff866e82f4f7957de18797169f5e616 526 Pfam PF13899 Thioredoxin-like 54 134 2.8E-14 T 17-10-2018 BJD13_19560 fff866e82f4f7957de18797169f5e616 526 SUPERFAMILY SSF52833 33 161 4.46E-22 T 17-10-2018 IPR036249 Thioredoxin-like superfamily BJD13_07960 1fae92d4f4f63e74e577ecd336abeecf 259 Gene3D G3DSA:3.10.350.10 44 112 5.8E-17 T 17-10-2018 IPR036779 LysM domain superfamily BJD13_07960 1fae92d4f4f63e74e577ecd336abeecf 259 Pfam PF01476 LysM domain 60 102 6.9E-16 T 17-10-2018 IPR018392 LysM domain BJD13_07960 1fae92d4f4f63e74e577ecd336abeecf 259 Pfam PF01551 Peptidase family M23 158 252 1.1E-28 T 17-10-2018 IPR016047 Peptidase M23 BJD13_07960 1fae92d4f4f63e74e577ecd336abeecf 259 SMART SM00257 59 103 8.2E-16 T 17-10-2018 IPR018392 LysM domain BJD13_07960 1fae92d4f4f63e74e577ecd336abeecf 259 SUPERFAMILY SSF51261 60 256 5.18E-45 T 17-10-2018 IPR011055 Duplicated hybrid motif BJD13_07960 1fae92d4f4f63e74e577ecd336abeecf 259 Gene3D G3DSA:2.70.70.10 116 258 2.8E-34 T 17-10-2018 IPR011055 Duplicated hybrid motif BJD13_11950 bbbb56170ce93b174fd18d97af35beac 155 PIRSF PIRSF002122 2 155 2.9E-60 T 17-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 BJD13_11950 bbbb56170ce93b174fd18d97af35beac 155 Pfam PF00177 Ribosomal protein S7p/S5e 1 148 2.6E-64 T 17-10-2018 IPR023798 Ribosomal protein S7 domain BJD13_11950 bbbb56170ce93b174fd18d97af35beac 155 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 155 3.6E-64 T 17-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 BJD13_11950 bbbb56170ce93b174fd18d97af35beac 155 SUPERFAMILY SSF47973 3 148 5.49E-57 T 17-10-2018 IPR036823 Ribosomal protein S7 domain superfamily BJD13_11950 bbbb56170ce93b174fd18d97af35beac 155 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 17-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_11950 bbbb56170ce93b174fd18d97af35beac 155 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 155 35.363 T 17-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 BJD13_11950 bbbb56170ce93b174fd18d97af35beac 155 Gene3D G3DSA:1.10.455.10 2 155 1.7E-57 T 17-10-2018 IPR036823 Ribosomal protein S7 domain superfamily BJD13_15680 a2bdadd839e4ff5f54c59de47ae8faeb 172 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 90 167 8.4E-12 T 17-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_15680 a2bdadd839e4ff5f54c59de47ae8faeb 172 Gene3D G3DSA:1.10.760.10 85 172 8.2E-27 T 17-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BJD13_15680 a2bdadd839e4ff5f54c59de47ae8faeb 172 SUPERFAMILY SSF46626 53 169 1.86E-16 T 17-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BJD13_06070 e638ccbd1a4a75385476bc259f47d62a 169 SUPERFAMILY SSF47240 1 156 4.87E-47 T 17-10-2018 IPR009078 Ferritin-like superfamily BJD13_06070 e638ccbd1a4a75385476bc259f47d62a 169 Pfam PF05974 Domain of unknown function (DUF892) 4 156 1.6E-49 T 17-10-2018 IPR010287 Domain of unknown function DUF892 BJD13_06070 e638ccbd1a4a75385476bc259f47d62a 169 Gene3D G3DSA:1.20.1260.10 1 169 2.4E-76 T 17-10-2018 IPR012347 Ferritin-like BJD13_20230 677f3cacdaf5bf9cd23e0b45440ff80c 587 Pfam PF06056 Putative ATPase subunit of terminase (gpP-like) 11 68 1.6E-26 T 17-10-2018 IPR010332 ATPase terminase subunit, putative GO:0005524|GO:0019069 BJD13_20230 677f3cacdaf5bf9cd23e0b45440ff80c 587 Gene3D G3DSA:3.30.420.240 397 571 2.1E-11 T 17-10-2018 BJD13_20230 677f3cacdaf5bf9cd23e0b45440ff80c 587 Pfam PF17289 Terminase RNaseH-like domain 412 570 1.2E-40 T 17-10-2018 IPR035421 Terminase, large subunit gp17-like BJD13_20230 677f3cacdaf5bf9cd23e0b45440ff80c 587 Gene3D G3DSA:3.40.50.300 88 304 1.2E-23 T 17-10-2018 BJD13_20230 677f3cacdaf5bf9cd23e0b45440ff80c 587 Pfam PF03237 Terminase-like family 161 382 1.2E-61 T 17-10-2018 IPR004921 Terminase large subunit, T4likevirus-type BJD13_01895 6a9259107d16e8175064eaaf932082b1 221 Pfam PF13202 EF hand 42 61 0.0071 T 17-10-2018 IPR002048 EF-hand domain GO:0005509 BJD13_01895 6a9259107d16e8175064eaaf932082b1 221 Pfam PF13202 EF hand 148 166 0.016 T 17-10-2018 IPR002048 EF-hand domain GO:0005509 BJD13_01895 6a9259107d16e8175064eaaf932082b1 221 ProSitePatterns PS00018 EF-hand calcium-binding domain. 152 164 - T 17-10-2018 IPR018247 EF-Hand 1, calcium-binding site BJD13_01895 6a9259107d16e8175064eaaf932082b1 221 ProSitePatterns PS00018 EF-hand calcium-binding domain. 47 59 - T 17-10-2018 IPR018247 EF-Hand 1, calcium-binding site BJD13_01895 6a9259107d16e8175064eaaf932082b1 221 Gene3D G3DSA:1.10.238.10 12 99 5.0E-12 T 17-10-2018 BJD13_01895 6a9259107d16e8175064eaaf932082b1 221 SUPERFAMILY SSF47473 39 169 1.09E-20 T 17-10-2018 IPR011992 EF-hand domain pair BJD13_01895 6a9259107d16e8175064eaaf932082b1 221 ProSitePatterns PS00018 EF-hand calcium-binding domain. 83 95 - T 17-10-2018 IPR018247 EF-Hand 1, calcium-binding site BJD13_01895 6a9259107d16e8175064eaaf932082b1 221 SMART SM00054 74 102 5.7 T 17-10-2018 IPR002048 EF-hand domain GO:0005509 BJD13_01895 6a9259107d16e8175064eaaf932082b1 221 SMART SM00054 38 66 5.3 T 17-10-2018 IPR002048 EF-hand domain GO:0005509 BJD13_01895 6a9259107d16e8175064eaaf932082b1 221 SMART SM00054 112 140 10.0 T 17-10-2018 IPR002048 EF-hand domain GO:0005509 BJD13_01895 6a9259107d16e8175064eaaf932082b1 221 SMART SM00054 143 171 7.4 T 17-10-2018 IPR002048 EF-hand domain GO:0005509 BJD13_01895 6a9259107d16e8175064eaaf932082b1 221 Gene3D G3DSA:1.10.238.10 107 171 1.6E-7 T 17-10-2018 BJD13_03805 0a90dcf9940a8c92863457170d838769 785 Gene3D G3DSA:1.50.10.10 346 646 1.2E-9 T 17-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 BJD13_03805 0a90dcf9940a8c92863457170d838769 785 SUPERFAMILY SSF48208 275 716 1.02E-16 T 17-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 BJD13_21190 1597f07d4001ca1813b4e56bbbfc0763 248 Pfam PF01012 Electron transfer flavoprotein domain 26 206 1.7E-41 T 17-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 BJD13_21190 1597f07d4001ca1813b4e56bbbfc0763 248 SMART SM00893 23 211 1.8E-56 T 17-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 BJD13_21190 1597f07d4001ca1813b4e56bbbfc0763 248 PIRSF PIRSF000090 1 248 6.4E-81 T 17-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 BJD13_21190 1597f07d4001ca1813b4e56bbbfc0763 248 SUPERFAMILY SSF52402 1 244 3.56E-77 T 17-10-2018 BJD13_21190 1597f07d4001ca1813b4e56bbbfc0763 248 Gene3D G3DSA:3.40.50.620 1 248 9.8E-81 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD13_09490 b8695d759d2fba5c4c09891d7b1d49c9 396 Pfam PF13288 DXP reductoisomerase C-terminal domain 267 383 1.9E-37 T 17-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 BJD13_09490 b8695d759d2fba5c4c09891d7b1d49c9 396 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 151 235 3.7E-39 T 17-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 BJD13_09490 b8695d759d2fba5c4c09891d7b1d49c9 396 Gene3D G3DSA:3.40.50.720 2 155 1.4E-45 T 17-10-2018 BJD13_09490 b8695d759d2fba5c4c09891d7b1d49c9 396 SUPERFAMILY SSF51735 7 155 7.48E-39 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_09490 b8695d759d2fba5c4c09891d7b1d49c9 396 PIRSF PIRSF006205 6 395 1.3E-143 T 17-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 BJD13_09490 b8695d759d2fba5c4c09891d7b1d49c9 396 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 7 389 4.1E-135 T 17-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 BJD13_09490 b8695d759d2fba5c4c09891d7b1d49c9 396 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 9 388 45.35 T 17-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 BJD13_09490 b8695d759d2fba5c4c09891d7b1d49c9 396 SUPERFAMILY SSF55347 131 270 5.23E-58 T 17-10-2018 BJD13_09490 b8695d759d2fba5c4c09891d7b1d49c9 396 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 9 137 4.9E-39 T 17-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 BJD13_09490 b8695d759d2fba5c4c09891d7b1d49c9 396 Gene3D G3DSA:1.10.1740.10 308 393 6.9E-28 T 17-10-2018 BJD13_09490 b8695d759d2fba5c4c09891d7b1d49c9 396 SUPERFAMILY SSF69055 298 388 6.54E-30 T 17-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 BJD13_15350 d4544cb4d14393d3011769d91708c52c 327 Pfam PF08908 Domain of unknown function (DUF1852) 1 323 1.1E-181 T 17-10-2018 IPR015004 Protein of unknown function DUF1852 BJD13_15350 d4544cb4d14393d3011769d91708c52c 327 PIRSF PIRSF034367 1 327 6.2E-202 T 17-10-2018 IPR015004 Protein of unknown function DUF1852 BJD13_15010 c9abceb93fa21e050808b84f8f17ab82 253 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 8 249 2.2E-88 T 17-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 BJD13_15010 c9abceb93fa21e050808b84f8f17ab82 253 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 1 250 41.65 T 17-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 BJD13_15010 c9abceb93fa21e050808b84f8f17ab82 253 Gene3D G3DSA:3.40.50.1820 1 252 1.9E-55 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_15010 c9abceb93fa21e050808b84f8f17ab82 253 SUPERFAMILY SSF53474 2 249 1.97E-42 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_15010 c9abceb93fa21e050808b84f8f17ab82 253 Pfam PF12697 Alpha/beta hydrolase family 12 244 1.7E-19 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD13_07720 b3a3313f7f1732624353fa7ee00fe9ae 580 Gene3D G3DSA:3.20.20.80 69 440 6.2E-141 T 17-10-2018 BJD13_07720 b3a3313f7f1732624353fa7ee00fe9ae 580 SUPERFAMILY SSF51445 93 416 2.83E-39 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily BJD13_07720 b3a3313f7f1732624353fa7ee00fe9ae 580 Gene3D G3DSA:2.60.220.20 442 579 8.1E-42 T 17-10-2018 BJD13_07720 b3a3313f7f1732624353fa7ee00fe9ae 580 Pfam PF02449 Beta-galactosidase 113 256 7.2E-6 T 17-10-2018 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 BJD13_12655 b6af96162b3e4735bf68610ff4d8a141 923 Pfam PF07715 TonB-dependent Receptor Plug Domain 63 179 4.6E-19 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_12655 b6af96162b3e4735bf68610ff4d8a141 923 Pfam PF00593 TonB dependent receptor 417 895 1.6E-33 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_12655 b6af96162b3e4735bf68610ff4d8a141 923 SUPERFAMILY SSF56935 39 920 6.54E-76 T 17-10-2018 BJD13_12655 b6af96162b3e4735bf68610ff4d8a141 923 Gene3D G3DSA:2.170.130.10 44 184 2.3E-13 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_12655 b6af96162b3e4735bf68610ff4d8a141 923 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 46 923 6.3E-204 T 17-10-2018 IPR010104 Bacterial TonB-dependent receptor BJD13_18355 2089997bbf1276d46c74f794c962753a 219 Pfam PF02517 CAAX protease self-immunity 124 212 6.1E-16 T 17-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 BJD13_22620 96de0e670211b2ebd7b48c2c55ddee5f 264 Pfam PF05690 Thiazole biosynthesis protein ThiG 12 258 2.1E-112 T 17-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 BJD13_22620 96de0e670211b2ebd7b48c2c55ddee5f 264 SUPERFAMILY SSF110399 8 250 1.16E-88 T 17-10-2018 BJD13_22620 96de0e670211b2ebd7b48c2c55ddee5f 264 Hamap MF_00443 Thiazole synthase [thiG]. 9 264 42.816 T 17-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 BJD13_22620 96de0e670211b2ebd7b48c2c55ddee5f 264 Gene3D G3DSA:3.20.20.70 2 264 1.0E-119 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD13_06215 92b0b4645ef3d4bf83e0499d8efe51d3 405 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 8 402 1.0E-131 T 17-10-2018 IPR017687 Outer membrane protein assembly factor BamB BJD13_06215 92b0b4645ef3d4bf83e0499d8efe51d3 405 SUPERFAMILY SSF50998 42 395 2.26E-78 T 17-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily BJD13_06215 92b0b4645ef3d4bf83e0499d8efe51d3 405 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 5 403 38.701 T 17-10-2018 IPR017687 Outer membrane protein assembly factor BamB BJD13_06215 92b0b4645ef3d4bf83e0499d8efe51d3 405 SMART SM00564 166 197 0.29 T 17-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BJD13_06215 92b0b4645ef3d4bf83e0499d8efe51d3 405 SMART SM00564 262 293 480.0 T 17-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BJD13_06215 92b0b4645ef3d4bf83e0499d8efe51d3 405 SMART SM00564 341 372 44.0 T 17-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BJD13_06215 92b0b4645ef3d4bf83e0499d8efe51d3 405 SMART SM00564 210 242 0.21 T 17-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BJD13_06215 92b0b4645ef3d4bf83e0499d8efe51d3 405 SMART SM00564 299 331 34.0 T 17-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BJD13_06215 92b0b4645ef3d4bf83e0499d8efe51d3 405 SMART SM00564 76 107 5.1E-5 T 17-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BJD13_06215 92b0b4645ef3d4bf83e0499d8efe51d3 405 SMART SM00564 125 157 0.015 T 17-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BJD13_06215 92b0b4645ef3d4bf83e0499d8efe51d3 405 Gene3D G3DSA:2.130.10.10 33 404 2.9E-95 T 17-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BJD13_06215 92b0b4645ef3d4bf83e0499d8efe51d3 405 Pfam PF13360 PQQ-like domain 57 113 5.1E-5 T 17-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat BJD13_06215 92b0b4645ef3d4bf83e0499d8efe51d3 405 Pfam PF13360 PQQ-like domain 119 330 8.9E-44 T 17-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat BJD13_00260 48454cd3f6e717f5321c6c7e1938e940 183 Pfam PF08281 Sigma-70, region 4 106 158 1.7E-11 T 17-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BJD13_00260 48454cd3f6e717f5321c6c7e1938e940 183 Pfam PF04542 Sigma-70 region 2 14 73 9.1E-8 T 17-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BJD13_00260 48454cd3f6e717f5321c6c7e1938e940 183 SUPERFAMILY SSF88659 87 162 2.4E-12 T 17-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BJD13_00260 48454cd3f6e717f5321c6c7e1938e940 183 SUPERFAMILY SSF88946 5 87 1.7E-10 T 17-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BJD13_00260 48454cd3f6e717f5321c6c7e1938e940 183 Gene3D G3DSA:1.10.10.10 79 163 9.6E-15 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_00260 48454cd3f6e717f5321c6c7e1938e940 183 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 13 158 2.6E-23 T 17-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BJD13_07555 0db66b5795319838e182f33979e9d0d6 303 SUPERFAMILY SSF103481 44 145 2.35E-17 T 17-10-2018 BJD13_07555 0db66b5795319838e182f33979e9d0d6 303 SUPERFAMILY SSF103481 185 282 4.45E-15 T 17-10-2018 BJD13_07555 0db66b5795319838e182f33979e9d0d6 303 Pfam PF00892 EamA-like transporter family 150 278 1.9E-17 T 17-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BJD13_07555 0db66b5795319838e182f33979e9d0d6 303 Pfam PF00892 EamA-like transporter family 11 141 1.6E-18 T 17-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BJD13_14645 0ecd9ff4464b3fcee2854c136aaec5b2 362 SUPERFAMILY SSF52518 21 356 1.07E-86 T 17-10-2018 IPR029061 Thiamin diphosphate-binding fold BJD13_14645 0ecd9ff4464b3fcee2854c136aaec5b2 362 Gene3D G3DSA:3.40.50.970 2 354 1.6E-98 T 17-10-2018 BJD13_14645 0ecd9ff4464b3fcee2854c136aaec5b2 362 Pfam PF00676 Dehydrogenase E1 component 41 330 6.1E-68 T 17-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 BJD13_14645 0ecd9ff4464b3fcee2854c136aaec5b2 362 TIGRFAM TIGR03181 PDH_E1_alph_x: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 11 353 1.2E-129 T 17-10-2018 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 BJD13_19965 73154989c1d786afd03876045af34714 158 Pfam PF03703 Bacterial PH domain 71 147 5.5E-15 T 17-10-2018 IPR005182 Domain of unknown function DUF304 BJD13_03535 cd12beb582a25a695fc437b78ad52108 99 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 96 6.9E-48 T 17-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 BJD13_03535 cd12beb582a25a695fc437b78ad52108 99 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 29.832 T 17-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 BJD13_03535 cd12beb582a25a695fc437b78ad52108 99 Pfam PF00216 Bacterial DNA-binding protein 3 91 5.3E-32 T 17-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BJD13_03535 cd12beb582a25a695fc437b78ad52108 99 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 17-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 BJD13_03535 cd12beb582a25a695fc437b78ad52108 99 SMART SM00411 3 92 1.0E-42 T 17-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BJD13_03535 cd12beb582a25a695fc437b78ad52108 99 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 8.2E-17 T 17-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BJD13_03535 cd12beb582a25a695fc437b78ad52108 99 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 8.2E-17 T 17-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BJD13_03535 cd12beb582a25a695fc437b78ad52108 99 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 8.2E-17 T 17-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BJD13_03535 cd12beb582a25a695fc437b78ad52108 99 SUPERFAMILY SSF47729 3 92 1.91E-32 T 17-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 BJD13_03535 cd12beb582a25a695fc437b78ad52108 99 Gene3D G3DSA:4.10.520.10 1 96 2.2E-37 T 17-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 BJD13_13455 8f06f9b33de4290ffbafa58726081e2a 222 SUPERFAMILY SSF46626 101 215 6.03E-18 T 17-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BJD13_13455 8f06f9b33de4290ffbafa58726081e2a 222 Gene3D G3DSA:1.10.760.10 107 220 9.3E-19 T 17-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BJD13_13455 8f06f9b33de4290ffbafa58726081e2a 222 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 121 211 7.6E-10 T 17-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_12360 fb81427ef8a4e4eee77c604cec97d728 301 Gene3D G3DSA:2.120.10.30 37 300 2.3E-62 T 17-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like BJD13_12360 fb81427ef8a4e4eee77c604cec97d728 301 SUPERFAMILY SSF63829 26 297 1.26E-59 T 17-10-2018 BJD13_12360 fb81427ef8a4e4eee77c604cec97d728 301 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 162 184 2.6E-11 T 17-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) BJD13_12360 fb81427ef8a4e4eee77c604cec97d728 301 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 185 205 2.6E-11 T 17-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) BJD13_12360 fb81427ef8a4e4eee77c604cec97d728 301 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 264 282 2.6E-11 T 17-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) BJD13_12360 fb81427ef8a4e4eee77c604cec97d728 301 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 222 239 2.6E-11 T 17-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) BJD13_12360 fb81427ef8a4e4eee77c604cec97d728 301 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 76 281 1.2E-45 T 17-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region BJD13_14020 69b59b3b6aa61e8343a89cf27fae7b67 207 SUPERFAMILY SSF56784 1 204 2.67E-32 T 17-10-2018 IPR036412 HAD-like superfamily BJD13_14020 69b59b3b6aa61e8343a89cf27fae7b67 207 Gene3D G3DSA:3.40.50.1000 5 184 4.1E-27 T 17-10-2018 IPR023214 HAD superfamily BJD13_14020 69b59b3b6aa61e8343a89cf27fae7b67 207 Gene3D G3DSA:1.10.150.240 16 79 4.1E-27 T 17-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BJD13_14020 69b59b3b6aa61e8343a89cf27fae7b67 207 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 176 6.8E-21 T 17-10-2018 BJD13_12050 f2302a92e9d1139c56bb44dfda97492f 295 Gene3D G3DSA:3.30.230.10 4 171 6.7E-55 T 17-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BJD13_12050 f2302a92e9d1139c56bb44dfda97492f 295 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 16 288 2.3E-72 T 17-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 BJD13_12050 f2302a92e9d1139c56bb44dfda97492f 295 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 15 283 32.008 T 17-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 BJD13_12050 f2302a92e9d1139c56bb44dfda97492f 295 SUPERFAMILY SSF55060 171 288 6.04E-26 T 17-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily BJD13_12050 f2302a92e9d1139c56bb44dfda97492f 295 Gene3D G3DSA:3.30.70.890 172 291 3.9E-26 T 17-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily BJD13_12050 f2302a92e9d1139c56bb44dfda97492f 295 PIRSF PIRSF010376 13 290 5.5E-85 T 17-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 BJD13_12050 f2302a92e9d1139c56bb44dfda97492f 295 Pfam PF00288 GHMP kinases N terminal domain 99 155 2.8E-10 T 17-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 BJD13_12050 f2302a92e9d1139c56bb44dfda97492f 295 SUPERFAMILY SSF54211 17 170 1.82E-43 T 17-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BJD13_12050 f2302a92e9d1139c56bb44dfda97492f 295 Pfam PF08544 GHMP kinases C terminal 213 269 4.1E-6 T 17-10-2018 IPR013750 GHMP kinase, C-terminal domain BJD13_11165 8c6e99bbaf2d1dae69916d6f12249cc7 106 Gene3D G3DSA:3.30.1310.10 1 106 3.1E-40 T 17-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily BJD13_11165 8c6e99bbaf2d1dae69916d6f12249cc7 106 SUPERFAMILY SSF82607 9 100 1.23E-30 T 17-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily BJD13_11165 8c6e99bbaf2d1dae69916d6f12249cc7 106 Pfam PF02575 YbaB/EbfC DNA-binding family 9 96 3.5E-31 T 17-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family BJD13_11165 8c6e99bbaf2d1dae69916d6f12249cc7 106 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 3 95 21.487 T 17-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family BJD13_11165 8c6e99bbaf2d1dae69916d6f12249cc7 106 PIRSF PIRSF004555 1 106 1.3E-34 T 17-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family BJD13_11165 8c6e99bbaf2d1dae69916d6f12249cc7 106 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 2 102 4.4E-31 T 17-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family BJD13_22240 df45b312ace8142f4e9e489e0ef9584c 221 Pfam PF04350 Pilus assembly protein, PilO 51 201 5.2E-50 T 17-10-2018 IPR007445 Pilus assembly protein, PilO BJD13_22240 df45b312ace8142f4e9e489e0ef9584c 221 Gene3D G3DSA:3.30.70.60 96 211 1.9E-34 T 17-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 BJD13_22240 df45b312ace8142f4e9e489e0ef9584c 221 PIRSF PIRSF016482 1 218 2.8E-87 T 17-10-2018 IPR007445 Pilus assembly protein, PilO BJD13_11710 d5e3850ad6250bf353a29b10b8dbc7f1 340 Gene3D G3DSA:3.90.180.10 29 336 1.4E-102 T 17-10-2018 BJD13_11710 d5e3850ad6250bf353a29b10b8dbc7f1 340 SUPERFAMILY SSF51735 118 289 1.55E-35 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_11710 d5e3850ad6250bf353a29b10b8dbc7f1 340 SMART SM00829 16 337 1.4E-11 T 17-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 BJD13_11710 d5e3850ad6250bf353a29b10b8dbc7f1 340 SUPERFAMILY SSF50129 9 140 4.41E-31 T 17-10-2018 IPR011032 GroES-like superfamily BJD13_11710 d5e3850ad6250bf353a29b10b8dbc7f1 340 Pfam PF13602 Zinc-binding dehydrogenase 195 337 1.1E-19 T 17-10-2018 BJD13_11710 d5e3850ad6250bf353a29b10b8dbc7f1 340 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 2 340 1.8E-135 T 17-10-2018 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 BJD13_11710 d5e3850ad6250bf353a29b10b8dbc7f1 340 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 33 90 2.3E-8 T 17-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 BJD13_11710 d5e3850ad6250bf353a29b10b8dbc7f1 340 Gene3D G3DSA:3.40.50.720 129 278 1.4E-102 T 17-10-2018 BJD13_16800 b77a8c9b23db06243f0c14e015a92633 425 SUPERFAMILY SSF55869 101 161 1.44E-21 T 17-10-2018 IPR035447 DNA topoisomerase I, N-terminal BJD13_16800 b77a8c9b23db06243f0c14e015a92633 425 Gene3D G3DSA:1.10.132.120 169 389 2.8E-86 T 17-10-2018 BJD13_16800 b77a8c9b23db06243f0c14e015a92633 425 Gene3D G3DSA:3.90.15.10 192 312 2.8E-86 T 17-10-2018 IPR014711 DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 BJD13_16800 b77a8c9b23db06243f0c14e015a92633 425 Pfam PF01028 Eukaryotic DNA topoisomerase I, catalytic core 165 368 1.4E-29 T 17-10-2018 IPR013500 DNA topoisomerase I, catalytic core, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 BJD13_16800 b77a8c9b23db06243f0c14e015a92633 425 Gene3D G3DSA:3.30.66.10 82 167 4.3E-33 T 17-10-2018 IPR035447 DNA topoisomerase I, N-terminal BJD13_16800 b77a8c9b23db06243f0c14e015a92633 425 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 311 325 1.0E-5 T 17-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 BJD13_16800 b77a8c9b23db06243f0c14e015a92633 425 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 364 375 1.0E-5 T 17-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 BJD13_16800 b77a8c9b23db06243f0c14e015a92633 425 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 224 238 1.0E-5 T 17-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 BJD13_16800 b77a8c9b23db06243f0c14e015a92633 425 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 246 262 1.0E-5 T 17-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 BJD13_16800 b77a8c9b23db06243f0c14e015a92633 425 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 201 220 1.0E-5 T 17-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 BJD13_16800 b77a8c9b23db06243f0c14e015a92633 425 SUPERFAMILY SSF56349 157 384 3.83E-68 T 17-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BJD13_03770 3ee2b8a043aee0c1e37b845d42197ea5 625 Pfam PF05960 Bacterial protein of unknown function (DUF885) 75 591 4.0E-153 T 17-10-2018 IPR010281 Protein of unknown function DUF885 BJD13_22795 a6ed5f7369dfe401d49013b558f82012 270 Gene3D G3DSA:3.60.140.10 3 270 1.3E-80 T 17-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily BJD13_22795 a6ed5f7369dfe401d49013b558f82012 270 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 35 268 8.5E-52 T 17-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase BJD13_22795 a6ed5f7369dfe401d49013b558f82012 270 SUPERFAMILY SSF64438 7 268 1.83E-74 T 17-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic BJD13_22795 a6ed5f7369dfe401d49013b558f82012 270 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 25 267 6.1E-72 T 17-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase BJD13_16145 15c99b7ac72e09ec6a2e78810dc8fad0 427 Pfam PF12867 DinB superfamily 22 153 7.1E-9 T 17-10-2018 IPR024775 DinB-like domain BJD13_16145 15c99b7ac72e09ec6a2e78810dc8fad0 427 Pfam PF03781 Sulfatase-modifying factor enzyme 1 205 339 1.3E-21 T 17-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 BJD13_16145 15c99b7ac72e09ec6a2e78810dc8fad0 427 Pfam PF03781 Sulfatase-modifying factor enzyme 1 344 424 8.3E-7 T 17-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 BJD13_16145 15c99b7ac72e09ec6a2e78810dc8fad0 427 SUPERFAMILY SSF56436 185 426 5.84E-62 T 17-10-2018 IPR016187 C-type lectin fold BJD13_16145 15c99b7ac72e09ec6a2e78810dc8fad0 427 TIGRFAM TIGR03440 egtB_TIGR03440: ergothioneine biosynthesis protein EgtB 18 423 9.0E-167 T 17-10-2018 IPR017806 Ergothioneine biosynthesis protein EgtB GO:0052699 KEGG: 00340+1.14.99.50|MetaCyc: PWY-7255 BJD13_16145 15c99b7ac72e09ec6a2e78810dc8fad0 427 Gene3D G3DSA:3.90.1580.10 189 340 4.4E-26 T 17-10-2018 BJD13_16145 15c99b7ac72e09ec6a2e78810dc8fad0 427 Gene3D G3DSA:3.90.1580.10 341 427 1.1E-9 T 17-10-2018 BJD13_08350 83490eb15a1e51661b61809b5e765324 361 SUPERFAMILY SSF53383 1 359 1.39E-105 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD13_08350 83490eb15a1e51661b61809b5e765324 361 Gene3D G3DSA:3.90.1150.10 257 361 2.6E-37 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD13_08350 83490eb15a1e51661b61809b5e765324 361 PIRSF PIRSF000525 1 361 6.2E-139 T 17-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 BJD13_08350 83490eb15a1e51661b61809b5e765324 361 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 5 360 5.7E-148 T 17-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 BJD13_08350 83490eb15a1e51661b61809b5e765324 361 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 187 206 - T 17-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site BJD13_08350 83490eb15a1e51661b61809b5e765324 361 Pfam PF00266 Aminotransferase class-V 5 348 6.8E-50 T 17-10-2018 IPR000192 Aminotransferase class V domain BJD13_08350 83490eb15a1e51661b61809b5e765324 361 Gene3D G3DSA:3.40.640.10 17 255 3.1E-78 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD13_08350 83490eb15a1e51661b61809b5e765324 361 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 360 47.839 T 17-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 BJD13_15655 91890850622d59f4cd56ed662bc45547 441 SMART SM00833 263 416 4.6E-42 T 17-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal BJD13_15655 91890850622d59f4cd56ed662bc45547 441 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 12 217 1.4E-56 T 17-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain BJD13_15655 91890850622d59f4cd56ed662bc45547 441 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 263 416 3.4E-22 T 17-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal BJD13_15655 91890850622d59f4cd56ed662bc45547 441 Gene3D G3DSA:3.40.50.300 9 236 2.7E-71 T 17-10-2018 BJD13_15655 91890850622d59f4cd56ed662bc45547 441 SUPERFAMILY SSF52540 8 316 2.66E-42 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_12635 49195e6491972fd4210ff8b44874e744 275 SUPERFAMILY SSF53335 20 229 7.21E-37 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_12635 49195e6491972fd4210ff8b44874e744 275 Pfam PF08241 Methyltransferase domain 46 142 2.9E-20 T 17-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 BJD13_12635 49195e6491972fd4210ff8b44874e744 275 Gene3D G3DSA:3.40.50.150 5 271 2.2E-35 T 17-10-2018 BJD13_05035 323652b88088f019f1cda7ebfd7bf57e 303 SMART SM00342 214 297 3.5E-22 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD13_05035 323652b88088f019f1cda7ebfd7bf57e 303 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 266 281 1.4E-5 T 17-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BJD13_05035 323652b88088f019f1cda7ebfd7bf57e 303 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 281 297 1.4E-5 T 17-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BJD13_05035 323652b88088f019f1cda7ebfd7bf57e 303 Gene3D G3DSA:1.10.10.60 195 302 5.5E-24 T 17-10-2018 BJD13_05035 323652b88088f019f1cda7ebfd7bf57e 303 Pfam PF12833 Helix-turn-helix domain 220 298 3.8E-17 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD13_05035 323652b88088f019f1cda7ebfd7bf57e 303 SUPERFAMILY SSF46689 250 299 2.15E-9 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_05035 323652b88088f019f1cda7ebfd7bf57e 303 Pfam PF14525 AraC-binding-like domain 21 166 1.5E-11 T 17-10-2018 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like BJD13_05035 323652b88088f019f1cda7ebfd7bf57e 303 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 250 293 - T 17-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 BJD13_12070 304adffe7c49091260145cb131c469c9 361 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 17-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 BJD13_12070 304adffe7c49091260145cb131c469c9 361 Gene3D G3DSA:3.30.70.1660 112 342 1.2E-93 T 17-10-2018 BJD13_12070 304adffe7c49091260145cb131c469c9 361 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 3 358 2.7E-153 T 17-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 BJD13_12070 304adffe7c49091260145cb131c469c9 361 Pfam PF00472 RF-1 domain 212 321 8.5E-42 T 17-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 BJD13_12070 304adffe7c49091260145cb131c469c9 361 Pfam PF03462 PCRF domain 13 203 8.1E-70 T 17-10-2018 IPR005139 Peptide chain release factor GO:0006415 BJD13_12070 304adffe7c49091260145cb131c469c9 361 SUPERFAMILY SSF75620 12 354 2.35E-129 T 17-10-2018 BJD13_12070 304adffe7c49091260145cb131c469c9 361 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 358 39.845 T 17-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 BJD13_12070 304adffe7c49091260145cb131c469c9 361 SMART SM00937 63 178 2.5E-63 T 17-10-2018 IPR005139 Peptide chain release factor GO:0006415 BJD13_12070 304adffe7c49091260145cb131c469c9 361 Gene3D G3DSA:3.30.160.20 210 297 1.2E-93 T 17-10-2018 BJD13_08750 4e4a7731d9f7ad0945513f7380141f42 236 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 11 219 6.6E-60 T 17-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 BJD13_08750 4e4a7731d9f7ad0945513f7380141f42 236 Pfam PF01895 PhoU domain 127 210 3.2E-17 T 17-10-2018 IPR026022 PhoU domain BJD13_08750 4e4a7731d9f7ad0945513f7380141f42 236 Pfam PF01895 PhoU domain 24 110 5.6E-19 T 17-10-2018 IPR026022 PhoU domain BJD13_08750 4e4a7731d9f7ad0945513f7380141f42 236 PIRSF PIRSF003107 6 223 3.6E-58 T 17-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 BJD13_08750 4e4a7731d9f7ad0945513f7380141f42 236 Gene3D G3DSA:1.20.58.220 1 114 1.5E-28 T 17-10-2018 IPR038078 PhoU-like domain superfamily BJD13_08750 4e4a7731d9f7ad0945513f7380141f42 236 SUPERFAMILY SSF109755 11 227 1.02E-64 T 17-10-2018 BJD13_08750 4e4a7731d9f7ad0945513f7380141f42 236 Gene3D G3DSA:1.20.58.220 115 226 6.0E-34 T 17-10-2018 IPR038078 PhoU-like domain superfamily BJD13_10340 bd1c6c23fe104a763b2685eb721a549f 208 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 29 208 3.3E-82 T 17-10-2018 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 BJD13_10340 bd1c6c23fe104a763b2685eb721a549f 208 Gene3D G3DSA:1.20.120.80 23 208 8.3E-58 T 17-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_10340 bd1c6c23fe104a763b2685eb721a549f 208 Pfam PF00510 Cytochrome c oxidase subunit III 30 206 2.1E-13 T 17-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_10340 bd1c6c23fe104a763b2685eb721a549f 208 SUPERFAMILY SSF81452 15 206 7.33E-57 T 17-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_16925 6c991c7590e6d14611d1f9474f96f54e 255 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 4 245 9.5E-84 T 17-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 BJD13_16925 6c991c7590e6d14611d1f9474f96f54e 255 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 253 85.198 T 17-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 BJD13_16925 6c991c7590e6d14611d1f9474f96f54e 255 SUPERFAMILY SSF63892 2 249 1.96E-77 T 17-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 BJD13_16925 6c991c7590e6d14611d1f9474f96f54e 255 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 5 245 2.8E-63 T 17-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 BJD13_16925 6c991c7590e6d14611d1f9474f96f54e 255 Gene3D G3DSA:3.20.20.70 1 255 8.2E-91 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD13_05210 a5f8fe85de242eab0431d9185fb41085 126 SMART SM00448 7 115 4.2E-5 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_05210 a5f8fe85de242eab0431d9185fb41085 126 Pfam PF00072 Response regulator receiver domain 9 75 5.3E-5 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_05210 a5f8fe85de242eab0431d9185fb41085 126 Gene3D G3DSA:3.40.50.2300 5 124 1.1E-29 T 17-10-2018 BJD13_05210 a5f8fe85de242eab0431d9185fb41085 126 SUPERFAMILY SSF52172 5 122 3.27E-18 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_03205 5b777fb0286374c4a3ee1f5bbe520f76 196 Pfam PF17384 RimP C-terminal SH3 domain 92 159 5.1E-21 T 17-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal BJD13_03205 5b777fb0286374c4a3ee1f5bbe520f76 196 Gene3D G3DSA:3.30.300.70 1 86 4.8E-20 T 17-10-2018 IPR035956 RimP, N-terminal domain superfamily BJD13_03205 5b777fb0286374c4a3ee1f5bbe520f76 196 Pfam PF02576 RimP N-terminal domain 11 89 3.6E-28 T 17-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal BJD13_03205 5b777fb0286374c4a3ee1f5bbe520f76 196 SUPERFAMILY SSF74942 90 159 3.66E-14 T 17-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily BJD13_03205 5b777fb0286374c4a3ee1f5bbe520f76 196 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 159 24.524 T 17-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 BJD13_03205 5b777fb0286374c4a3ee1f5bbe520f76 196 SUPERFAMILY SSF75420 5 89 2.62E-21 T 17-10-2018 IPR035956 RimP, N-terminal domain superfamily BJD13_05115 8ba32454bf20a56ae18386484f731b15 444 PRINTS PR00447 Natural resistance-associated macrophage protein signature 117 143 5.3E-61 T 17-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 BJD13_05115 8ba32454bf20a56ae18386484f731b15 444 PRINTS PR00447 Natural resistance-associated macrophage protein signature 326 345 5.3E-61 T 17-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 BJD13_05115 8ba32454bf20a56ae18386484f731b15 444 PRINTS PR00447 Natural resistance-associated macrophage protein signature 354 371 5.3E-61 T 17-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 BJD13_05115 8ba32454bf20a56ae18386484f731b15 444 PRINTS PR00447 Natural resistance-associated macrophage protein signature 170 191 5.3E-61 T 17-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 BJD13_05115 8ba32454bf20a56ae18386484f731b15 444 PRINTS PR00447 Natural resistance-associated macrophage protein signature 145 164 5.3E-61 T 17-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 BJD13_05115 8ba32454bf20a56ae18386484f731b15 444 PRINTS PR00447 Natural resistance-associated macrophage protein signature 386 405 5.3E-61 T 17-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 BJD13_05115 8ba32454bf20a56ae18386484f731b15 444 PRINTS PR00447 Natural resistance-associated macrophage protein signature 222 245 5.3E-61 T 17-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 BJD13_05115 8ba32454bf20a56ae18386484f731b15 444 Pfam PF01566 Natural resistance-associated macrophage protein 58 414 3.1E-130 T 17-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 BJD13_05115 8ba32454bf20a56ae18386484f731b15 444 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 29 442 39.556 T 17-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 BJD13_05115 8ba32454bf20a56ae18386484f731b15 444 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 38 410 1.8E-120 T 17-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 BJD13_22820 b775f46cad0d4eaea93d682cd8620f1d 455 TIGRFAM TIGR02400 trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 3 453 2.1E-181 T 17-10-2018 IPR012766 Alpha,alpha-trehalose-phosphate synthase GO:0003825|GO:0005992 KEGG: 00500+2.4.1.15 BJD13_22820 b775f46cad0d4eaea93d682cd8620f1d 455 SUPERFAMILY SSF53756 2 454 9.42E-141 T 17-10-2018 BJD13_22820 b775f46cad0d4eaea93d682cd8620f1d 455 Pfam PF00982 Glycosyltransferase family 20 16 453 1.1E-120 T 17-10-2018 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 KEGG: 00500+2.4.1.15 BJD13_22820 b775f46cad0d4eaea93d682cd8620f1d 455 Gene3D G3DSA:3.40.50.2000 230 438 1.3E-152 T 17-10-2018 BJD13_22820 b775f46cad0d4eaea93d682cd8620f1d 455 Gene3D G3DSA:3.40.50.2000 19 449 1.3E-152 T 17-10-2018 BJD13_07655 12c760729cbc51e584e698cb064acde6 271 SUPERFAMILY SSF51621 10 269 6.67E-98 T 17-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 BJD13_07655 12c760729cbc51e584e698cb064acde6 271 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 10 269 40.723 T 17-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 BJD13_07655 12c760729cbc51e584e698cb064acde6 271 Gene3D G3DSA:3.20.20.60 9 271 1.3E-102 T 17-10-2018 BJD13_07655 12c760729cbc51e584e698cb064acde6 271 Pfam PF02548 Ketopantoate hydroxymethyltransferase 11 264 6.8E-102 T 17-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 BJD13_07655 12c760729cbc51e584e698cb064acde6 271 PIRSF PIRSF000388 1 271 1.1E-94 T 17-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 BJD13_07655 12c760729cbc51e584e698cb064acde6 271 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 15 269 3.8E-97 T 17-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 BJD13_12810 3b272ce04c120c57dc3cfa8ad17e000b 275 Pfam PF03799 Cell division protein FtsQ 107 219 2.0E-21 T 17-10-2018 IPR005548 Cell division protein FtsQ/DivIB BJD13_12810 3b272ce04c120c57dc3cfa8ad17e000b 275 Gene3D G3DSA:3.10.20.310 33 103 6.9E-22 T 17-10-2018 BJD13_12810 3b272ce04c120c57dc3cfa8ad17e000b 275 Gene3D G3DSA:3.40.50.11690 104 231 3.6E-36 T 17-10-2018 BJD13_12810 3b272ce04c120c57dc3cfa8ad17e000b 275 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 4 227 24.352 T 17-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 BJD13_12810 3b272ce04c120c57dc3cfa8ad17e000b 275 Pfam PF08478 POTRA domain, FtsQ-type 35 103 1.5E-18 T 17-10-2018 IPR013685 POTRA domain, FtsQ-type BJD13_06655 4190dd63116155ffadec94bd3fc613c6 695 Pfam PF00990 Diguanylate cyclase, GGDEF domain 263 418 2.9E-43 T 17-10-2018 IPR000160 GGDEF domain BJD13_06655 4190dd63116155ffadec94bd3fc613c6 695 Pfam PF03707 Bacterial signalling protein N terminal repeat 114 165 2.1E-15 T 17-10-2018 IPR005330 MHYT domain BJD13_06655 4190dd63116155ffadec94bd3fc613c6 695 Pfam PF03707 Bacterial signalling protein N terminal repeat 180 239 1.2E-8 T 17-10-2018 IPR005330 MHYT domain BJD13_06655 4190dd63116155ffadec94bd3fc613c6 695 Pfam PF03707 Bacterial signalling protein N terminal repeat 51 106 1.9E-19 T 17-10-2018 IPR005330 MHYT domain BJD13_06655 4190dd63116155ffadec94bd3fc613c6 695 SUPERFAMILY SSF141868 438 683 3.4E-91 T 17-10-2018 IPR035919 EAL domain superfamily BJD13_06655 4190dd63116155ffadec94bd3fc613c6 695 SMART SM00267 251 422 4.4E-56 T 17-10-2018 IPR000160 GGDEF domain BJD13_06655 4190dd63116155ffadec94bd3fc613c6 695 Gene3D G3DSA:3.30.70.270 257 434 6.2E-54 T 17-10-2018 BJD13_06655 4190dd63116155ffadec94bd3fc613c6 695 SUPERFAMILY SSF55073 267 423 9.42E-47 T 17-10-2018 IPR029787 Nucleotide cyclase BJD13_06655 4190dd63116155ffadec94bd3fc613c6 695 SMART SM00052 432 678 1.6E-119 T 17-10-2018 IPR001633 EAL domain BJD13_06655 4190dd63116155ffadec94bd3fc613c6 695 Pfam PF00563 EAL domain 438 673 4.1E-77 T 17-10-2018 IPR001633 EAL domain BJD13_06655 4190dd63116155ffadec94bd3fc613c6 695 Gene3D G3DSA:3.20.20.450 435 686 2.1E-104 T 17-10-2018 IPR035919 EAL domain superfamily BJD13_06655 4190dd63116155ffadec94bd3fc613c6 695 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 260 421 4.7E-38 T 17-10-2018 IPR000160 GGDEF domain BJD13_14270 c77542deec671b190371039cb08c708f 90 Gene3D G3DSA:1.10.10.60 4 89 2.1E-26 T 17-10-2018 BJD13_14270 c77542deec671b190371039cb08c708f 90 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 53 70 3.7E-12 T 17-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD13_14270 c77542deec671b190371039cb08c708f 90 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 70 90 3.7E-12 T 17-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD13_14270 c77542deec671b190371039cb08c708f 90 SUPERFAMILY SSF46689 10 89 3.81E-23 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_14270 c77542deec671b190371039cb08c708f 90 Pfam PF02954 Bacterial regulatory protein, Fis family 47 87 4.4E-14 T 17-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD13_14270 c77542deec671b190371039cb08c708f 90 PIRSF PIRSF002097 2 90 1.1E-34 T 17-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 BJD13_14270 c77542deec671b190371039cb08c708f 90 PRINTS PR01591 DNA-binding protein FIS signature 18 34 1.0E-8 T 17-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 BJD13_14270 c77542deec671b190371039cb08c708f 90 PRINTS PR01591 DNA-binding protein FIS signature 34 49 1.0E-8 T 17-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 BJD13_14270 c77542deec671b190371039cb08c708f 90 PRINTS PR01591 DNA-binding protein FIS signature 49 61 1.0E-8 T 17-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 BJD13_03690 848ce9f5d32f699a767caf24e73aeaa6 66 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 15 36 2.2E-9 T 17-10-2018 IPR019626 Stress-induced protein, KGG, repeat BJD13_03690 848ce9f5d32f699a767caf24e73aeaa6 66 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 42 61 1.6E-6 T 17-10-2018 IPR019626 Stress-induced protein, KGG, repeat BJD13_02960 4f2c44ab6f67326eaa4dad05add66bb1 458 Gene3D G3DSA:3.40.50.12160 7 123 1.6E-29 T 17-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily BJD13_02960 4f2c44ab6f67326eaa4dad05add66bb1 458 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 6 439 60.349 T 17-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 BJD13_02960 4f2c44ab6f67326eaa4dad05add66bb1 458 SUPERFAMILY SSF102114 116 368 5.23E-52 T 17-10-2018 BJD13_02960 4f2c44ab6f67326eaa4dad05add66bb1 458 Gene3D G3DSA:2.40.50.140 377 442 7.9E-17 T 17-10-2018 BJD13_02960 4f2c44ab6f67326eaa4dad05add66bb1 458 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 7 437 7.5E-100 T 17-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 BJD13_02960 4f2c44ab6f67326eaa4dad05add66bb1 458 Pfam PF04055 Radical SAM superfamily 143 320 1.0E-29 T 17-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BJD13_02960 4f2c44ab6f67326eaa4dad05add66bb1 458 SMART SM00729 137 362 1.5E-53 T 17-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 BJD13_02960 4f2c44ab6f67326eaa4dad05add66bb1 458 Gene3D G3DSA:3.80.30.20 135 376 1.4E-70 T 17-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe BJD13_02960 4f2c44ab6f67326eaa4dad05add66bb1 458 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 7 437 8.6E-173 T 17-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 BJD13_02960 4f2c44ab6f67326eaa4dad05add66bb1 458 Pfam PF00919 Uncharacterized protein family UPF0004 7 99 4.7E-20 T 17-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 BJD13_02960 4f2c44ab6f67326eaa4dad05add66bb1 458 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 141 161 - T 17-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 BJD13_01980 d1be169219b7e9e2156c9642f53e0682 180 SUPERFAMILY SSF52317 7 178 2.87E-48 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD13_01980 d1be169219b7e9e2156c9642f53e0682 180 Gene3D G3DSA:3.40.50.880 2 180 4.1E-55 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD13_01980 d1be169219b7e9e2156c9642f53e0682 180 Pfam PF01965 DJ-1/PfpI family 8 176 5.6E-51 T 17-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 BJD13_01980 d1be169219b7e9e2156c9642f53e0682 180 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 10 178 7.6E-52 T 17-10-2018 IPR006286 Deglycase PfpI BJD13_17150 1e9e84bc44132d13204b45d8c70e04a3 351 PRINTS PR01805 VacJ lipoprotein signature 121 134 1.5E-22 T 17-10-2018 IPR007428 MlaA lipoprotein GO:0016020 BJD13_17150 1e9e84bc44132d13204b45d8c70e04a3 351 PRINTS PR01805 VacJ lipoprotein signature 189 206 1.5E-22 T 17-10-2018 IPR007428 MlaA lipoprotein GO:0016020 BJD13_17150 1e9e84bc44132d13204b45d8c70e04a3 351 PRINTS PR01805 VacJ lipoprotein signature 138 154 1.5E-22 T 17-10-2018 IPR007428 MlaA lipoprotein GO:0016020 BJD13_17150 1e9e84bc44132d13204b45d8c70e04a3 351 PRINTS PR01805 VacJ lipoprotein signature 225 242 1.5E-22 T 17-10-2018 IPR007428 MlaA lipoprotein GO:0016020 BJD13_17150 1e9e84bc44132d13204b45d8c70e04a3 351 Pfam PF04333 MlaA lipoprotein 120 311 4.8E-71 T 17-10-2018 IPR007428 MlaA lipoprotein GO:0016020 BJD13_03250 6f40323cb488feb62daac6b0984da1a4 89 SUPERFAMILY SSF158997 1 80 3.4E-7 T 17-10-2018 BJD13_03250 6f40323cb488feb62daac6b0984da1a4 89 Gene3D G3DSA:2.20.25.10 8 89 7.8E-31 T 17-10-2018 BJD13_03250 6f40323cb488feb62daac6b0984da1a4 89 Pfam PF03966 Trm112p-like protein 2 68 2.4E-8 T 17-10-2018 IPR005651 Trm112-like BJD13_05950 b06b8f9eab14dd739346d32d681dfd23 167 SUPERFAMILY SSF141452 2 165 9.81E-41 T 17-10-2018 IPR036624 Hcp1-like superfamily BJD13_05950 b06b8f9eab14dd739346d32d681dfd23 167 Gene3D G3DSA:2.30.110.20 1 166 1.7E-48 T 17-10-2018 IPR036624 Hcp1-like superfamily BJD13_05950 b06b8f9eab14dd739346d32d681dfd23 167 Pfam PF05638 Type VI secretion system effector, Hcp 12 140 4.5E-29 T 17-10-2018 IPR008514 Type VI secretion system effector, Hcp BJD13_07810 459cd9088868f127b7cbff7fd26ce86c 465 SUPERFAMILY SSF52540 131 444 3.17E-29 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_07810 459cd9088868f127b7cbff7fd26ce86c 465 SUPERFAMILY SSF88723 7 157 9.61E-11 T 17-10-2018 IPR029060 PIN-like domain superfamily BJD13_07810 459cd9088868f127b7cbff7fd26ce86c 465 Pfam PF02562 PhoH-like protein 253 455 2.8E-54 T 17-10-2018 IPR003714 PhoH-like protein GO:0005524 BJD13_07810 459cd9088868f127b7cbff7fd26ce86c 465 Gene3D G3DSA:3.40.50.300 251 464 4.3E-66 T 17-10-2018 BJD13_07810 459cd9088868f127b7cbff7fd26ce86c 465 Gene3D G3DSA:3.40.50.1010 2 161 3.2E-25 T 17-10-2018 BJD13_07810 459cd9088868f127b7cbff7fd26ce86c 465 Pfam PF13638 PIN domain 8 158 3.0E-39 T 17-10-2018 IPR002716 PIN domain BJD13_07810 459cd9088868f127b7cbff7fd26ce86c 465 SMART SM00670 6 145 4.3E-12 T 17-10-2018 IPR002716 PIN domain BJD13_13010 3e53ebf721d03fa8f0923f3d8c5f89a0 162 Pfam PF00583 Acetyltransferase (GNAT) family 48 136 1.1E-12 T 17-10-2018 IPR000182 GNAT domain BJD13_13010 3e53ebf721d03fa8f0923f3d8c5f89a0 162 SUPERFAMILY SSF55729 7 141 6.0E-25 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD13_13010 3e53ebf721d03fa8f0923f3d8c5f89a0 162 Gene3D G3DSA:3.40.630.30 6 155 1.5E-22 T 17-10-2018 BJD13_19110 d942fc4f6b3478280698cdbf06c0bb85 262 SUPERFAMILY SSF52317 32 256 1.14E-41 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD13_19110 d942fc4f6b3478280698cdbf06c0bb85 262 Gene3D G3DSA:3.40.50.880 11 251 4.4E-61 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD13_19110 d942fc4f6b3478280698cdbf06c0bb85 262 Pfam PF06283 Trehalose utilisation 23 243 1.9E-56 T 17-10-2018 IPR029010 ThuA-like domain BJD13_12680 816db5b196d660e5353f3215474e3415 190 Gene3D G3DSA:1.10.357.10 2 187 4.1E-33 T 17-10-2018 BJD13_12680 816db5b196d660e5353f3215474e3415 190 SUPERFAMILY SSF46689 2 80 5.13E-15 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_12680 816db5b196d660e5353f3215474e3415 190 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 59 3.4E-10 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD13_12680 816db5b196d660e5353f3215474e3415 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 3.2E-8 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD13_12680 816db5b196d660e5353f3215474e3415 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 3.2E-8 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD13_12680 816db5b196d660e5353f3215474e3415 190 SUPERFAMILY SSF48498 80 180 7.79E-10 T 17-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BJD13_07040 c0488e234748f4b7ce2e0d8628b55777 374 Gene3D G3DSA:3.40.50.880 151 372 4.2E-72 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD13_07040 c0488e234748f4b7ce2e0d8628b55777 374 Gene3D G3DSA:3.50.30.20 2 150 5.1E-59 T 17-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BJD13_07040 c0488e234748f4b7ce2e0d8628b55777 374 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 229 243 3.7E-37 T 17-10-2018 BJD13_07040 c0488e234748f4b7ce2e0d8628b55777 374 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 190 204 3.7E-37 T 17-10-2018 BJD13_07040 c0488e234748f4b7ce2e0d8628b55777 374 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 277 294 3.7E-37 T 17-10-2018 BJD13_07040 c0488e234748f4b7ce2e0d8628b55777 374 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 302 313 3.7E-37 T 17-10-2018 BJD13_07040 c0488e234748f4b7ce2e0d8628b55777 374 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 260 276 3.7E-37 T 17-10-2018 BJD13_07040 c0488e234748f4b7ce2e0d8628b55777 374 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 374 48.084 T 17-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BJD13_07040 c0488e234748f4b7ce2e0d8628b55777 374 SUPERFAMILY SSF52317 180 372 7.95E-61 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD13_07040 c0488e234748f4b7ce2e0d8628b55777 374 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 371 6.1E-144 T 17-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BJD13_07040 c0488e234748f4b7ce2e0d8628b55777 374 SUPERFAMILY SSF52021 4 149 7.45E-57 T 17-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BJD13_07040 c0488e234748f4b7ce2e0d8628b55777 374 SMART SM01097 3 133 9.5E-89 T 17-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BJD13_07040 c0488e234748f4b7ce2e0d8628b55777 374 Pfam PF00117 Glutamine amidotransferase class-I 193 368 3.5E-45 T 17-10-2018 IPR017926 Glutamine amidotransferase BJD13_07040 c0488e234748f4b7ce2e0d8628b55777 374 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 131 6.4E-53 T 17-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BJD13_07040 c0488e234748f4b7ce2e0d8628b55777 374 PRINTS PR00096 Glutamine amidotransferase superfamily signature 345 358 3.0E-10 T 17-10-2018 BJD13_07040 c0488e234748f4b7ce2e0d8628b55777 374 PRINTS PR00096 Glutamine amidotransferase superfamily signature 232 241 3.0E-10 T 17-10-2018 BJD13_07040 c0488e234748f4b7ce2e0d8628b55777 374 PRINTS PR00096 Glutamine amidotransferase superfamily signature 260 271 3.0E-10 T 17-10-2018 BJD13_13260 c15753051607fdd67a28df844a664661 245 SUPERFAMILY SSF51735 5 242 4.48E-70 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_13260 c15753051607fdd67a28df844a664661 245 Gene3D G3DSA:3.40.50.720 1 244 4.9E-69 T 17-10-2018 BJD13_13260 c15753051607fdd67a28df844a664661 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 17-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BJD13_13260 c15753051607fdd67a28df844a664661 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 3.9E-54 T 17-10-2018 BJD13_13260 c15753051607fdd67a28df844a664661 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 3.1E-9 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_13260 c15753051607fdd67a28df844a664661 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 3.1E-9 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_13260 c15753051607fdd67a28df844a664661 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 3.1E-9 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_13260 c15753051607fdd67a28df844a664661 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.3E-34 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_13260 c15753051607fdd67a28df844a664661 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 4.3E-34 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_13260 c15753051607fdd67a28df844a664661 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 4.3E-34 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_13260 c15753051607fdd67a28df844a664661 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 4.3E-34 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_13260 c15753051607fdd67a28df844a664661 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 4.3E-34 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_13260 c15753051607fdd67a28df844a664661 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 4.3E-34 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_08930 a2310c43e14e33795cf9484f78c0780a 316 Gene3D G3DSA:3.40.33.10 21 179 3.5E-8 T 17-10-2018 IPR035940 CAP superfamily BJD13_08930 a2310c43e14e33795cf9484f78c0780a 316 SUPERFAMILY SSF55797 50 176 1.91E-6 T 17-10-2018 IPR035940 CAP superfamily BJD13_08930 a2310c43e14e33795cf9484f78c0780a 316 Pfam PF00188 Cysteine-rich secretory protein family 57 177 3.8E-6 T 17-10-2018 IPR014044 CAP domain BJD13_23215 12c0c0ffa3d431bcdcf88cc6dbd666b4 300 Pfam PF03466 LysR substrate binding domain 93 291 8.1E-16 T 17-10-2018 IPR005119 LysR, substrate-binding BJD13_23215 12c0c0ffa3d431bcdcf88cc6dbd666b4 300 SUPERFAMILY SSF53850 94 293 2.9E-22 T 17-10-2018 BJD13_23215 12c0c0ffa3d431bcdcf88cc6dbd666b4 300 Gene3D G3DSA:1.10.10.10 1 83 2.6E-29 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_23215 12c0c0ffa3d431bcdcf88cc6dbd666b4 300 SUPERFAMILY SSF46785 6 113 2.04E-18 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_23215 12c0c0ffa3d431bcdcf88cc6dbd666b4 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 6.4E-18 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_23215 12c0c0ffa3d431bcdcf88cc6dbd666b4 300 Gene3D G3DSA:3.40.190.290 91 297 4.7E-76 T 17-10-2018 BJD13_23215 12c0c0ffa3d431bcdcf88cc6dbd666b4 300 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 5 295 2.3E-115 T 17-10-2018 IPR017685 HTH-type transcriptional regulator ArgP BJD13_10625 e65ef1e58ced77b6dc34f2e6cc4033a1 284 SUPERFAMILY SSF51430 14 273 7.2E-69 T 17-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BJD13_10625 e65ef1e58ced77b6dc34f2e6cc4033a1 284 Pfam PF00248 Aldo/keto reductase family 23 271 3.1E-48 T 17-10-2018 IPR023210 NADP-dependent oxidoreductase domain BJD13_10625 e65ef1e58ced77b6dc34f2e6cc4033a1 284 Gene3D G3DSA:3.20.20.100 7 284 2.4E-86 T 17-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BJD13_10625 e65ef1e58ced77b6dc34f2e6cc4033a1 284 PIRSF PIRSF000097 120 278 4.8E-22 T 17-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BJD13_10625 e65ef1e58ced77b6dc34f2e6cc4033a1 284 PIRSF PIRSF000097 5 123 6.5E-14 T 17-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BJD13_10625 e65ef1e58ced77b6dc34f2e6cc4033a1 284 PRINTS PR00069 Aldo-keto reductase signature 206 230 2.7E-15 T 17-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BJD13_10625 e65ef1e58ced77b6dc34f2e6cc4033a1 284 PRINTS PR00069 Aldo-keto reductase signature 47 71 2.7E-15 T 17-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BJD13_10625 e65ef1e58ced77b6dc34f2e6cc4033a1 284 PRINTS PR00069 Aldo-keto reductase signature 102 120 2.7E-15 T 17-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BJD13_10625 e65ef1e58ced77b6dc34f2e6cc4033a1 284 PRINTS PR00069 Aldo-keto reductase signature 132 149 2.7E-15 T 17-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BJD13_17705 1c251402f29aef305819b4302d690261 394 PRINTS PR00134 Glycosyl hydrolase family 10 signature 112 124 2.0E-15 T 17-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 BJD13_17705 1c251402f29aef305819b4302d690261 394 PRINTS PR00134 Glycosyl hydrolase family 10 signature 206 217 2.0E-15 T 17-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 BJD13_17705 1c251402f29aef305819b4302d690261 394 PRINTS PR00134 Glycosyl hydrolase family 10 signature 234 246 2.0E-15 T 17-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 BJD13_17705 1c251402f29aef305819b4302d690261 394 PRINTS PR00134 Glycosyl hydrolase family 10 signature 160 171 2.0E-15 T 17-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 BJD13_17705 1c251402f29aef305819b4302d690261 394 ProSitePatterns PS00591 Glycosyl hydrolases family 10 (GH10) active site. 268 278 - T 17-10-2018 IPR031158 Glycosyl hydrolases family 10, active site MetaCyc: PWY-6717|MetaCyc: PWY-6784 BJD13_17705 1c251402f29aef305819b4302d690261 394 Gene3D G3DSA:3.20.20.80 36 390 8.4E-128 T 17-10-2018 BJD13_17705 1c251402f29aef305819b4302d690261 394 Pfam PF00331 Glycosyl hydrolase family 10 37 385 2.6E-98 T 17-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 BJD13_17705 1c251402f29aef305819b4302d690261 394 SUPERFAMILY SSF51445 36 386 3.28E-102 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily BJD13_17705 1c251402f29aef305819b4302d690261 394 SMART SM00633 81 388 7.0E-92 T 17-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 BJD13_01680 27d04ac4907bb7e9131f6db7c9166a15 460 Pfam PF13520 Amino acid permease 36 419 1.5E-34 T 17-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BJD13_01680 27d04ac4907bb7e9131f6db7c9166a15 460 PIRSF PIRSF006060 4 452 2.1E-63 T 17-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BJD13_01680 27d04ac4907bb7e9131f6db7c9166a15 460 Gene3D G3DSA:1.20.1740.10 20 457 3.6E-62 T 17-10-2018 BJD13_02725 c5a1ca9d59d4ca473d32a0581a837b19 214 Gene3D G3DSA:3.30.160.150 21 171 1.0E-36 T 17-10-2018 BJD13_02725 c5a1ca9d59d4ca473d32a0581a837b19 214 Pfam PF04390 Lipopolysaccharide-assembly 39 162 8.6E-6 T 17-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 BJD13_02725 c5a1ca9d59d4ca473d32a0581a837b19 214 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 6 167 23.889 T 17-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 BJD13_15375 aeea4e59ca0a93ec61153b6bb55a4864 653 Gene3D G3DSA:3.40.50.1820 437 646 1.3E-10 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_15375 aeea4e59ca0a93ec61153b6bb55a4864 653 SUPERFAMILY SSF53474 436 613 2.52E-6 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_12685 007e46582dc84b6525de1435095c21bc 904 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 147 158 - T 17-10-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 BJD13_12685 007e46582dc84b6525de1435095c21bc 904 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 561 573 - T 17-10-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 BJD13_12685 007e46582dc84b6525de1435095c21bc 904 Pfam PF00311 Phosphoenolpyruvate carboxylase 142 904 1.5E-223 T 17-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 BJD13_12685 007e46582dc84b6525de1435095c21bc 904 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 10 904 17.28 T 17-10-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 BJD13_12685 007e46582dc84b6525de1435095c21bc 904 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 404 424 3.8E-51 T 17-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 BJD13_12685 007e46582dc84b6525de1435095c21bc 904 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 601 630 3.8E-51 T 17-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 BJD13_12685 007e46582dc84b6525de1435095c21bc 904 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 257 272 3.8E-51 T 17-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 BJD13_12685 007e46582dc84b6525de1435095c21bc 904 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 146 159 3.8E-51 T 17-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 BJD13_12685 007e46582dc84b6525de1435095c21bc 904 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 559 579 3.8E-51 T 17-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 BJD13_12685 007e46582dc84b6525de1435095c21bc 904 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 735 761 3.8E-51 T 17-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 BJD13_12685 007e46582dc84b6525de1435095c21bc 904 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 199 215 3.8E-51 T 17-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 BJD13_12685 007e46582dc84b6525de1435095c21bc 904 SUPERFAMILY SSF51621 18 904 3.3E-260 T 17-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 BJD13_06535 febbafab3123cd19f518f17f635d5f8f 217 TIGRFAM TIGR03570 NeuD_NnaD: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 5 207 5.2E-51 T 17-10-2018 IPR020019 Sialic acid O-acyltransferase NeuD-like BJD13_06535 febbafab3123cd19f518f17f635d5f8f 217 Gene3D G3DSA:3.40.50.20 1 90 2.5E-11 T 17-10-2018 BJD13_06535 febbafab3123cd19f518f17f635d5f8f 217 SUPERFAMILY SSF51161 3 209 3.6E-38 T 17-10-2018 IPR011004 Trimeric LpxA-like superfamily BJD13_06535 febbafab3123cd19f518f17f635d5f8f 217 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 158 192 3.0E-7 T 17-10-2018 IPR001451 Hexapeptide repeat BJD13_06535 febbafab3123cd19f518f17f635d5f8f 217 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 117 150 8.3E-7 T 17-10-2018 IPR001451 Hexapeptide repeat BJD13_06535 febbafab3123cd19f518f17f635d5f8f 217 Gene3D G3DSA:2.160.10.10 91 216 8.0E-30 T 17-10-2018 BJD13_03515 b5aa576b98d1d5e292a5ff9fb685cd9b 65 Pfam PF01632 Ribosomal protein L35 2 62 9.9E-25 T 17-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_03515 b5aa576b98d1d5e292a5ff9fb685cd9b 65 SUPERFAMILY SSF143034 2 64 3.4E-23 T 17-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_03515 b5aa576b98d1d5e292a5ff9fb685cd9b 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 2.9E-18 T 17-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 BJD13_03515 b5aa576b98d1d5e292a5ff9fb685cd9b 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 2.9E-18 T 17-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 BJD13_03515 b5aa576b98d1d5e292a5ff9fb685cd9b 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 2.9E-18 T 17-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 BJD13_03515 b5aa576b98d1d5e292a5ff9fb685cd9b 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 17-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_03515 b5aa576b98d1d5e292a5ff9fb685cd9b 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 18.741 T 17-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 BJD13_03515 b5aa576b98d1d5e292a5ff9fb685cd9b 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 9.7E-26 T 17-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 BJD13_03515 b5aa576b98d1d5e292a5ff9fb685cd9b 65 Gene3D G3DSA:2.40.50.530 1 64 4.1E-22 T 17-10-2018 BJD13_00640 e0b17e966771d83fa38dbd1c8df487f0 385 Pfam PF06834 TraU protein 43 382 4.5E-74 T 17-10-2018 IPR009649 TraU BJD13_05125 e9d70a12406bb58cfb3d848dd7f09c7e 171 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 17 116 8.3E-28 T 17-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain BJD13_05125 e9d70a12406bb58cfb3d848dd7f09c7e 171 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 21 164 47.456 T 17-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 BJD13_05125 e9d70a12406bb58cfb3d848dd7f09c7e 171 SUPERFAMILY SSF53927 13 164 1.11E-55 T 17-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 BJD13_05125 e9d70a12406bb58cfb3d848dd7f09c7e 171 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 68 105 - T 17-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 BJD13_05125 e9d70a12406bb58cfb3d848dd7f09c7e 171 Gene3D G3DSA:3.40.140.10 12 168 7.7E-57 T 17-10-2018 BJD13_12825 5bcee661e1c508a3b0deae222e03d6a4 430 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 21 369 35.808 T 17-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BJD13_12825 5bcee661e1c508a3b0deae222e03d6a4 430 Gene3D G3DSA:3.40.50.2000 189 353 9.0E-51 T 17-10-2018 BJD13_12825 5bcee661e1c508a3b0deae222e03d6a4 430 SUPERFAMILY SSF53756 20 368 4.12E-113 T 17-10-2018 BJD13_12825 5bcee661e1c508a3b0deae222e03d6a4 430 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 17 365 4.6E-108 T 17-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BJD13_12825 5bcee661e1c508a3b0deae222e03d6a4 430 Gene3D G3DSA:3.40.50.2000 14 188 1.0E-57 T 17-10-2018 BJD13_12825 5bcee661e1c508a3b0deae222e03d6a4 430 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 21 158 5.4E-40 T 17-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BJD13_12825 5bcee661e1c508a3b0deae222e03d6a4 430 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 198 361 1.2E-38 T 17-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 BJD13_19170 2dc0c9483279b473685bb28ded15ed14 283 SUPERFAMILY SSF58113 11 168 5.36E-6 T 17-10-2018 BJD13_19170 2dc0c9483279b473685bb28ded15ed14 283 Gene3D G3DSA:1.20.5.1230 9 200 4.3E-7 T 17-10-2018 BJD13_09700 26691673620bd5ed0c0c82e0d78796e7 431 SUPERFAMILY SSF53335 26 369 1.38E-73 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_09700 26691673620bd5ed0c0c82e0d78796e7 431 PIRSF PIRSF003085 17 428 8.1E-117 T 17-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 BJD13_09700 26691673620bd5ed0c0c82e0d78796e7 431 Gene3D G3DSA:3.40.50.150 142 419 2.4E-98 T 17-10-2018 BJD13_09700 26691673620bd5ed0c0c82e0d78796e7 431 Pfam PF02353 Mycolic acid cyclopropane synthetase 138 406 8.3E-78 T 17-10-2018 BJD13_16190 31150feecb68951a656e9dfaf06bd6bc 347 Pfam PF01734 Patatin-like phospholipase 53 209 5.9E-27 T 17-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 BJD13_16190 31150feecb68951a656e9dfaf06bd6bc 347 Gene3D G3DSA:3.40.1090.10 37 142 1.6E-21 T 17-10-2018 BJD13_16190 31150feecb68951a656e9dfaf06bd6bc 347 Gene3D G3DSA:3.40.1090.10 143 261 3.5E-18 T 17-10-2018 BJD13_16190 31150feecb68951a656e9dfaf06bd6bc 347 SUPERFAMILY SSF52151 43 298 2.2E-56 T 17-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase BJD13_02390 05777e9d1517ac02df8302c8b5780725 1047 SUPERFAMILY SSF82693 38 131 7.15E-27 T 17-10-2018 BJD13_02390 05777e9d1517ac02df8302c8b5780725 1047 Gene3D G3DSA:3.30.70.1320 133 332 0.0 T 17-10-2018 BJD13_02390 05777e9d1517ac02df8302c8b5780725 1047 Gene3D G3DSA:3.30.70.1430 568 669 0.0 T 17-10-2018 BJD13_02390 05777e9d1517ac02df8302c8b5780725 1047 SUPERFAMILY SSF82693 136 330 2.79E-26 T 17-10-2018 BJD13_02390 05777e9d1517ac02df8302c8b5780725 1047 SUPERFAMILY SSF82693 673 858 2.88E-24 T 17-10-2018 BJD13_02390 05777e9d1517ac02df8302c8b5780725 1047 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 4.8E-110 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_02390 05777e9d1517ac02df8302c8b5780725 1047 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 4.8E-110 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_02390 05777e9d1517ac02df8302c8b5780725 1047 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 4.8E-110 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_02390 05777e9d1517ac02df8302c8b5780725 1047 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 4.8E-110 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_02390 05777e9d1517ac02df8302c8b5780725 1047 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 4.8E-110 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_02390 05777e9d1517ac02df8302c8b5780725 1047 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 4.8E-110 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_02390 05777e9d1517ac02df8302c8b5780725 1047 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 4.8E-110 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_02390 05777e9d1517ac02df8302c8b5780725 1047 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 4.8E-110 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_02390 05777e9d1517ac02df8302c8b5780725 1047 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 4.8E-110 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_02390 05777e9d1517ac02df8302c8b5780725 1047 SUPERFAMILY SSF82866 296 497 5.75E-49 T 17-10-2018 BJD13_02390 05777e9d1517ac02df8302c8b5780725 1047 Gene3D G3DSA:3.30.2090.10 722 810 0.0 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_02390 05777e9d1517ac02df8302c8b5780725 1047 Pfam PF00873 AcrB/AcrD/AcrF family 1 1027 0.0 T 17-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BJD13_02390 05777e9d1517ac02df8302c8b5780725 1047 SUPERFAMILY SSF82693 566 670 2.82E-31 T 17-10-2018 BJD13_02390 05777e9d1517ac02df8302c8b5780725 1047 Gene3D G3DSA:3.30.70.1440 670 867 0.0 T 17-10-2018 BJD13_02390 05777e9d1517ac02df8302c8b5780725 1047 Gene3D G3DSA:3.30.2090.10 179 275 0.0 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_02390 05777e9d1517ac02df8302c8b5780725 1047 Gene3D G3DSA:1.20.1640.10 514 1024 0.0 T 17-10-2018 BJD13_02390 05777e9d1517ac02df8302c8b5780725 1047 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1042 0.0 T 17-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 BJD13_02390 05777e9d1517ac02df8302c8b5780725 1047 SUPERFAMILY SSF82866 839 1026 8.63E-42 T 17-10-2018 BJD13_02390 05777e9d1517ac02df8302c8b5780725 1047 Gene3D G3DSA:1.20.1640.10 8 513 0.0 T 17-10-2018 BJD13_02390 05777e9d1517ac02df8302c8b5780725 1047 SUPERFAMILY SSF82714 723 808 7.06E-22 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_02390 05777e9d1517ac02df8302c8b5780725 1047 SUPERFAMILY SSF82714 182 272 1.7E-22 T 17-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BJD13_02390 05777e9d1517ac02df8302c8b5780725 1047 Gene3D G3DSA:3.30.70.1430 38 818 0.0 T 17-10-2018 BJD13_06160 ec1f1cc7a223b6dbcfe76d58574426ef 331 Gene3D G3DSA:3.60.10.10 7 260 2.2E-65 T 17-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BJD13_06160 ec1f1cc7a223b6dbcfe76d58574426ef 331 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 7 260 1.4E-67 T 17-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 BJD13_06160 ec1f1cc7a223b6dbcfe76d58574426ef 331 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 7 259 2.2E-70 T 17-10-2018 BJD13_06160 ec1f1cc7a223b6dbcfe76d58574426ef 331 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 32 41 - T 17-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 BJD13_06160 ec1f1cc7a223b6dbcfe76d58574426ef 331 SUPERFAMILY SSF56219 7 261 8.51E-75 T 17-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BJD13_06160 ec1f1cc7a223b6dbcfe76d58574426ef 331 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 9 253 2.6E-15 T 17-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase BJD13_00570 34ce4134bcfde85c13c2da19191c795e 415 SUPERFAMILY SSF47823 93 186 5.49E-20 T 17-10-2018 BJD13_00570 34ce4134bcfde85c13c2da19191c795e 415 SUPERFAMILY SSF56349 186 398 4.12E-27 T 17-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BJD13_00570 34ce4134bcfde85c13c2da19191c795e 415 Pfam PF00589 Phage integrase family 214 395 5.4E-10 T 17-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 BJD13_00570 34ce4134bcfde85c13c2da19191c795e 415 Gene3D G3DSA:1.10.150.130 80 187 3.6E-14 T 17-10-2018 IPR010998 Integrase/recombinase, N-terminal BJD13_00570 34ce4134bcfde85c13c2da19191c795e 415 Gene3D G3DSA:1.10.443.10 188 396 1.1E-35 T 17-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 BJD13_13150 94f862506b5f5934e0de2f6ff029f5aa 342 Gene3D G3DSA:3.40.50.10490 199 327 1.1E-42 T 17-10-2018 BJD13_13150 94f862506b5f5934e0de2f6ff029f5aa 342 Gene3D G3DSA:3.40.50.10490 5 195 4.6E-47 T 17-10-2018 BJD13_13150 94f862506b5f5934e0de2f6ff029f5aa 342 Pfam PF01380 SIS domain 49 166 6.7E-18 T 17-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 BJD13_13150 94f862506b5f5934e0de2f6ff029f5aa 342 Pfam PF01380 SIS domain 204 286 1.8E-14 T 17-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 BJD13_13150 94f862506b5f5934e0de2f6ff029f5aa 342 SUPERFAMILY SSF53697 11 340 2.76E-75 T 17-10-2018 BJD13_14845 9e823da2a2e07691470063591bca1219 321 SMART SM01126 138 286 2.6E-47 T 17-10-2018 IPR024445 ISXO2-like transposase domain BJD13_14845 9e823da2a2e07691470063591bca1219 321 Pfam PF12762 ISXO2-like transposase domain 139 286 4.8E-31 T 17-10-2018 IPR024445 ISXO2-like transposase domain BJD13_14845 9e823da2a2e07691470063591bca1219 321 Pfam PF12760 Transposase zinc-ribbon domain 26 70 8.5E-11 T 17-10-2018 IPR024442 Transposase, zinc-ribbon BJD13_08385 6c784edfd7048dfd2fff3e7d78c466be 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 2 64 5.9E-19 T 17-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD13_08385 6c784edfd7048dfd2fff3e7d78c466be 234 SMART SM00345 5 64 1.0E-17 T 17-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD13_08385 6c784edfd7048dfd2fff3e7d78c466be 234 SUPERFAMILY SSF64288 52 229 7.54E-32 T 17-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily BJD13_08385 6c784edfd7048dfd2fff3e7d78c466be 234 SUPERFAMILY SSF46785 1 68 3.16E-20 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_08385 6c784edfd7048dfd2fff3e7d78c466be 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 24 38 2.2E-5 T 17-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD13_08385 6c784edfd7048dfd2fff3e7d78c466be 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 38 54 2.2E-5 T 17-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD13_08385 6c784edfd7048dfd2fff3e7d78c466be 234 Gene3D G3DSA:1.10.10.10 1 70 5.3E-22 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_08385 6c784edfd7048dfd2fff3e7d78c466be 234 SMART SM00866 87 224 1.7E-23 T 17-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 BJD13_08385 6c784edfd7048dfd2fff3e7d78c466be 234 Pfam PF07702 UTRA domain 88 223 4.6E-26 T 17-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 BJD13_08385 6c784edfd7048dfd2fff3e7d78c466be 234 Gene3D G3DSA:3.40.1410.10 85 220 3.6E-26 T 17-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily BJD13_08385 6c784edfd7048dfd2fff3e7d78c466be 234 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 1 231 3.4E-93 T 17-10-2018 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 BJD13_02905 c0fa6c48977bf1d213ac356836fb62a4 700 Gene3D G3DSA:3.40.390.10 59 700 1.4E-225 T 17-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 BJD13_02905 c0fa6c48977bf1d213ac356836fb62a4 700 Gene3D G3DSA:1.10.1380.10 90 480 1.4E-225 T 17-10-2018 BJD13_02905 c0fa6c48977bf1d213ac356836fb62a4 700 Pfam PF05649 Peptidase family M13 65 441 1.9E-93 T 17-10-2018 IPR008753 Peptidase M13, N-terminal domain GO:0006508 BJD13_02905 c0fa6c48977bf1d213ac356836fb62a4 700 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 524 540 1.0E-23 T 17-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 BJD13_02905 c0fa6c48977bf1d213ac356836fb62a4 700 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 503 515 1.0E-23 T 17-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 BJD13_02905 c0fa6c48977bf1d213ac356836fb62a4 700 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 485 497 1.0E-23 T 17-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 BJD13_02905 c0fa6c48977bf1d213ac356836fb62a4 700 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 598 609 1.0E-23 T 17-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 BJD13_02905 c0fa6c48977bf1d213ac356836fb62a4 700 Pfam PF01431 Peptidase family M13 493 697 7.6E-69 T 17-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 BJD13_02905 c0fa6c48977bf1d213ac356836fb62a4 700 SUPERFAMILY SSF55486 55 700 1.47E-203 T 17-10-2018 BJD13_11685 7ee1d065d1a05932941f9c0ade696f41 402 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 5 398 53.522 T 17-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 BJD13_11685 7ee1d065d1a05932941f9c0ade696f41 402 SUPERFAMILY SSF53383 11 398 6.84E-117 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD13_11685 7ee1d065d1a05932941f9c0ade696f41 402 Gene3D G3DSA:3.40.640.10 61 299 2.0E-129 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD13_11685 7ee1d065d1a05932941f9c0ade696f41 402 Gene3D G3DSA:3.90.1150.10 43 390 2.0E-129 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD13_11685 7ee1d065d1a05932941f9c0ade696f41 402 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 8 400 2.4E-226 T 17-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 BJD13_11685 7ee1d065d1a05932941f9c0ade696f41 402 Pfam PF00155 Aminotransferase class I and II 46 390 1.1E-64 T 17-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BJD13_15835 53f9dfaf73d1fc19c9b4b79b3cbeccf4 167 SUPERFAMILY SSF51182 28 146 7.98E-18 T 17-10-2018 IPR011051 RmlC-like cupin domain superfamily BJD13_15835 53f9dfaf73d1fc19c9b4b79b3cbeccf4 167 Pfam PF07883 Cupin domain 60 131 6.8E-13 T 17-10-2018 IPR013096 Cupin 2, conserved barrel BJD13_15835 53f9dfaf73d1fc19c9b4b79b3cbeccf4 167 Gene3D G3DSA:2.60.120.10 17 167 3.0E-43 T 17-10-2018 IPR014710 RmlC-like jelly roll fold BJD13_10025 9308eae9083a8a29b78f92eeeb776211 321 Gene3D G3DSA:1.20.1510.10 17 209 2.7E-47 T 17-10-2018 IPR027469 Cation efflux transmembrane domain superfamily BJD13_10025 9308eae9083a8a29b78f92eeeb776211 321 SUPERFAMILY SSF160240 215 286 1.96E-10 T 17-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 BJD13_10025 9308eae9083a8a29b78f92eeeb776211 321 SUPERFAMILY SSF161111 17 210 2.09E-56 T 17-10-2018 IPR027469 Cation efflux transmembrane domain superfamily BJD13_10025 9308eae9083a8a29b78f92eeeb776211 321 Pfam PF01545 Cation efflux family 19 209 1.0E-46 T 17-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 BJD13_10025 9308eae9083a8a29b78f92eeeb776211 321 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 16 289 2.1E-87 T 17-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 BJD13_06965 08602b09e59e94f1850fdfe6fe23bbbd 149 SUPERFAMILY SSF54427 27 147 5.55E-12 T 17-10-2018 IPR032710 NTF2-like domain superfamily BJD13_06965 08602b09e59e94f1850fdfe6fe23bbbd 149 Gene3D G3DSA:3.10.450.50 25 148 3.9E-11 T 17-10-2018 BJD13_09160 2bdbd01499ad42f48450a5394ba51d38 472 Gene3D G3DSA:1.10.579.10 290 472 2.3E-70 T 17-10-2018 BJD13_09160 2bdbd01499ad42f48450a5394ba51d38 472 Pfam PF00875 DNA photolyase 4 163 2.7E-52 T 17-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 BJD13_09160 2bdbd01499ad42f48450a5394ba51d38 472 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 322 334 - T 17-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal BJD13_09160 2bdbd01499ad42f48450a5394ba51d38 472 Gene3D G3DSA:3.40.50.620 5 202 2.3E-92 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD13_09160 2bdbd01499ad42f48450a5394ba51d38 472 SUPERFAMILY SSF52425 3 206 6.8E-58 T 17-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 BJD13_09160 2bdbd01499ad42f48450a5394ba51d38 472 Pfam PF03441 FAD binding domain of DNA photolyase 272 468 9.8E-78 T 17-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 BJD13_09160 2bdbd01499ad42f48450a5394ba51d38 472 PRINTS PR00147 DNA photolyase signature 140 156 5.3E-23 T 17-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 BJD13_09160 2bdbd01499ad42f48450a5394ba51d38 472 PRINTS PR00147 DNA photolyase signature 381 395 5.3E-23 T 17-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 BJD13_09160 2bdbd01499ad42f48450a5394ba51d38 472 PRINTS PR00147 DNA photolyase signature 322 338 5.3E-23 T 17-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 BJD13_09160 2bdbd01499ad42f48450a5394ba51d38 472 PRINTS PR00147 DNA photolyase signature 342 360 5.3E-23 T 17-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 BJD13_09160 2bdbd01499ad42f48450a5394ba51d38 472 SUPERFAMILY SSF48173 192 470 1.83E-99 T 17-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 BJD13_09160 2bdbd01499ad42f48450a5394ba51d38 472 Gene3D G3DSA:1.25.40.80 131 283 2.3E-92 T 17-10-2018 BJD13_11020 e44c2864d136de80d33764ba381ca1c1 185 SUPERFAMILY SSF55144 6 172 1.05E-13 T 17-10-2018 IPR009097 Cyclic phosphodiesterase BJD13_11020 e44c2864d136de80d33764ba381ca1c1 185 Gene3D G3DSA:3.90.1140.10 1 172 1.8E-13 T 17-10-2018 BJD13_06290 7f5038962b9e91be939e277adb10f7e9 785 Pfam PF01580 FtsK/SpoIIIE family 394 607 3.7E-64 T 17-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 BJD13_06290 7f5038962b9e91be939e277adb10f7e9 785 Pfam PF09397 Ftsk gamma domain 720 780 2.7E-27 T 17-10-2018 IPR018541 FtsK gamma domain BJD13_06290 7f5038962b9e91be939e277adb10f7e9 785 Gene3D G3DSA:1.10.10.10 722 784 9.5E-28 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_06290 7f5038962b9e91be939e277adb10f7e9 785 Gene3D G3DSA:3.30.980.40 286 390 1.3E-33 T 17-10-2018 BJD13_06290 7f5038962b9e91be939e277adb10f7e9 785 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 31 204 4.8E-40 T 17-10-2018 IPR025199 DNA translocase FtsK, 4TM region BJD13_06290 7f5038962b9e91be939e277adb10f7e9 785 SMART SM00382 429 628 0.0077 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_06290 7f5038962b9e91be939e277adb10f7e9 785 Gene3D G3DSA:3.40.50.300 391 693 6.9E-114 T 17-10-2018 BJD13_06290 7f5038962b9e91be939e277adb10f7e9 785 SUPERFAMILY SSF52540 366 679 5.8E-51 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_06290 7f5038962b9e91be939e277adb10f7e9 785 SMART SM00843 718 783 1.7E-40 T 17-10-2018 IPR018541 FtsK gamma domain BJD13_06290 7f5038962b9e91be939e277adb10f7e9 785 SUPERFAMILY SSF46785 718 783 4.24E-22 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_14495 6f8786acc4026d0532cffd013bf2972c 358 Pfam PF01212 Beta-eliminating lyase 22 300 4.6E-30 T 17-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 BJD13_14495 6f8786acc4026d0532cffd013bf2972c 358 Gene3D G3DSA:3.40.640.10 21 258 3.7E-114 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD13_14495 6f8786acc4026d0532cffd013bf2972c 358 SUPERFAMILY SSF53383 8 347 1.75E-75 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD13_14495 6f8786acc4026d0532cffd013bf2972c 358 Gene3D G3DSA:3.90.1150.10 14 341 3.7E-114 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD13_11040 c41369767dca02266ad7fc4d331adcc6 539 Gene3D G3DSA:3.40.50.2300 29 200 2.2E-63 T 17-10-2018 BJD13_11040 c41369767dca02266ad7fc4d331adcc6 539 Pfam PF02954 Bacterial regulatory protein, Fis family 501 531 4.5E-8 T 17-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD13_11040 c41369767dca02266ad7fc4d331adcc6 539 Gene3D G3DSA:3.40.50.300 213 396 8.5E-59 T 17-10-2018 BJD13_11040 c41369767dca02266ad7fc4d331adcc6 539 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 249 262 - T 17-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BJD13_11040 c41369767dca02266ad7fc4d331adcc6 539 Pfam PF06506 Propionate catabolism activator 43 201 1.4E-44 T 17-10-2018 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal GO:0000156|GO:0000160|GO:0003677|GO:0005524 BJD13_11040 c41369767dca02266ad7fc4d331adcc6 539 SUPERFAMILY SSF159800 21 201 1.24E-46 T 17-10-2018 BJD13_11040 c41369767dca02266ad7fc4d331adcc6 539 SMART SM00382 245 388 1.0E-9 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_11040 c41369767dca02266ad7fc4d331adcc6 539 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 499 516 6.2E-6 T 17-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD13_11040 c41369767dca02266ad7fc4d331adcc6 539 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 516 536 6.2E-6 T 17-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BJD13_11040 c41369767dca02266ad7fc4d331adcc6 539 TIGRFAM TIGR02329 propionate_PrpR: propionate catabolism operon regulatory protein PrpR 18 532 2.5E-234 T 17-10-2018 IPR012704 Signal transduction response regulator, propionate catabolism, transcriptional regulator PrpR GO:0000156|GO:0000160|GO:0003677|GO:0005737|GO:0019629 BJD13_11040 c41369767dca02266ad7fc4d331adcc6 539 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 434 443 - T 17-10-2018 IPR025944 Sigma-54 interaction domain, conserved site BJD13_11040 c41369767dca02266ad7fc4d331adcc6 539 SUPERFAMILY SSF46689 486 532 3.59E-7 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_11040 c41369767dca02266ad7fc4d331adcc6 539 Gene3D G3DSA:3.40.50.10660 98 185 2.2E-63 T 17-10-2018 BJD13_11040 c41369767dca02266ad7fc4d331adcc6 539 Pfam PF00158 Sigma-54 interaction domain 226 391 2.5E-59 T 17-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 BJD13_11040 c41369767dca02266ad7fc4d331adcc6 539 SUPERFAMILY SSF52540 226 452 5.82E-60 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_11040 c41369767dca02266ad7fc4d331adcc6 539 Gene3D G3DSA:1.10.8.60 397 469 1.2E-16 T 17-10-2018 BJD13_11040 c41369767dca02266ad7fc4d331adcc6 539 Gene3D G3DSA:1.10.10.60 481 531 1.5E-9 T 17-10-2018 BJD13_16220 a8df0e64dd7cac387cef14f34ff978c7 220 Gene3D G3DSA:3.40.1400.10 1 211 3.4E-94 T 17-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 BJD13_16220 a8df0e64dd7cac387cef14f34ff978c7 220 SUPERFAMILY SSF89623 1 161 1.01E-36 T 17-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 BJD13_16220 a8df0e64dd7cac387cef14f34ff978c7 220 Pfam PF02502 Ribose/Galactose Isomerase 3 144 1.7E-29 T 17-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 BJD13_16220 a8df0e64dd7cac387cef14f34ff978c7 220 Pfam PF12408 Ribose-5-phosphate isomerase 163 208 8.9E-21 T 17-10-2018 IPR022133 Ribose-5-phosphate isomerase, C-terminal BJD13_17025 2f229bbd104114d741a0f0995b5fac1b 766 Gene3D G3DSA:2.170.130.10 30 164 2.8E-13 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_17025 2f229bbd104114d741a0f0995b5fac1b 766 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 149 1.7E-12 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_17025 2f229bbd104114d741a0f0995b5fac1b 766 Pfam PF00593 TonB dependent receptor 267 763 1.8E-38 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_17025 2f229bbd104114d741a0f0995b5fac1b 766 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 749 766 - T 17-10-2018 IPR010917 TonB-dependent receptor, conserved site BJD13_17025 2f229bbd104114d741a0f0995b5fac1b 766 SUPERFAMILY SSF56935 35 766 1.28E-82 T 17-10-2018 BJD13_00975 a5f98fa37b9654e47bba237caa2c967d 92 Pfam PF00216 Bacterial DNA-binding protein 1 54 1.6E-10 T 17-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BJD13_00975 a5f98fa37b9654e47bba237caa2c967d 92 SUPERFAMILY SSF47729 1 90 2.5E-11 T 17-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 BJD13_00975 a5f98fa37b9654e47bba237caa2c967d 92 Gene3D G3DSA:4.10.520.10 1 90 2.8E-11 T 17-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 BJD13_14905 b22e06afd9b357a27dbd4e60d3677044 212 Pfam PF09483 Type III secretion protein (HpaP) 22 211 5.8E-38 T 17-10-2018 IPR013390 Type III secretion protein HpaP BJD13_14905 b22e06afd9b357a27dbd4e60d3677044 212 TIGRFAM TIGR02557 HpaP: type III secretion protein HpaP 13 212 3.3E-76 T 17-10-2018 IPR013390 Type III secretion protein HpaP BJD13_15630 0b14396e66549e924886652f0e06ea54 364 Gene3D G3DSA:3.40.50.300 31 180 1.6E-18 T 17-10-2018 BJD13_15630 0b14396e66549e924886652f0e06ea54 364 Hamap MF_01919 Cell division protein ZapE [zapE]. 4 364 49.439 T 17-10-2018 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 BJD13_15630 0b14396e66549e924886652f0e06ea54 364 Pfam PF03969 AFG1-like ATPase 4 359 1.7E-126 T 17-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 BJD13_15630 0b14396e66549e924886652f0e06ea54 364 SUPERFAMILY SSF52540 51 175 6.73E-13 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_02750 e5c0fa83146dc36d38672d2eb0529729 156 Gene3D G3DSA:3.40.1280.10 1 156 2.5E-49 T 17-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BJD13_02750 e5c0fa83146dc36d38672d2eb0529729 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 155 6.2E-53 T 17-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 BJD13_02750 e5c0fa83146dc36d38672d2eb0529729 156 PIRSF PIRSF004505 1 155 4.7E-46 T 17-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 BJD13_02750 e5c0fa83146dc36d38672d2eb0529729 156 Pfam PF02590 Predicted SPOUT methyltransferase 1 154 1.9E-48 T 17-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 BJD13_02750 e5c0fa83146dc36d38672d2eb0529729 156 SUPERFAMILY SSF75217 1 153 1.31E-47 T 17-10-2018 IPR029028 Alpha/beta knot methyltransferases BJD13_02750 e5c0fa83146dc36d38672d2eb0529729 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 28.084 T 17-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 BJD13_08975 b497e2629d4cfe8f3346a7ff2e5a8985 200 Pfam PF09186 Domain of unknown function (DUF1949) 135 191 1.4E-8 T 17-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal BJD13_08975 b497e2629d4cfe8f3346a7ff2e5a8985 200 SUPERFAMILY SSF54980 132 196 2.01E-10 T 17-10-2018 IPR035647 EF-G domain III/V-like BJD13_08975 b497e2629d4cfe8f3346a7ff2e5a8985 200 Gene3D G3DSA:3.30.230.30 4 128 2.5E-45 T 17-10-2018 IPR036956 Impact, N-terminal domain superfamily BJD13_08975 b497e2629d4cfe8f3346a7ff2e5a8985 200 Pfam PF01205 Uncharacterized protein family UPF0029 19 119 2.0E-28 T 17-10-2018 IPR001498 Impact, N-terminal BJD13_08975 b497e2629d4cfe8f3346a7ff2e5a8985 200 SUPERFAMILY SSF54211 9 123 4.55E-38 T 17-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BJD13_13005 db3e3515e3b976482c53df59cda057d5 369 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 155 363 7.2E-53 T 17-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 BJD13_13005 db3e3515e3b976482c53df59cda057d5 369 PIRSF PIRSF006769 7 367 2.9E-120 T 17-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 BJD13_13005 db3e3515e3b976482c53df59cda057d5 369 Gene3D G3DSA:3.40.140.10 3 149 1.6E-44 T 17-10-2018 BJD13_13005 db3e3515e3b976482c53df59cda057d5 369 SUPERFAMILY SSF53927 12 153 1.15E-46 T 17-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 BJD13_13005 db3e3515e3b976482c53df59cda057d5 369 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 16 360 4.2E-112 T 17-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 BJD13_13005 db3e3515e3b976482c53df59cda057d5 369 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 11 108 8.9E-18 T 17-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain BJD13_13005 db3e3515e3b976482c53df59cda057d5 369 Gene3D G3DSA:3.40.430.10 150 368 6.5E-66 T 17-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 BJD13_13005 db3e3515e3b976482c53df59cda057d5 369 SUPERFAMILY SSF53597 154 362 7.01E-56 T 17-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 BJD13_13005 db3e3515e3b976482c53df59cda057d5 369 Pfam PF01872 RibD C-terminal domain 156 359 6.6E-45 T 17-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 BJD13_13005 db3e3515e3b976482c53df59cda057d5 369 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 59 97 - T 17-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 BJD13_17050 6bf9223f06bd0634f266f122ca123dd5 388 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 169 299 1.8E-18 T 17-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 BJD13_17050 6bf9223f06bd0634f266f122ca123dd5 388 SUPERFAMILY SSF53335 78 384 4.55E-68 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_17050 6bf9223f06bd0634f266f122ca123dd5 388 Gene3D G3DSA:3.30.750.80 72 178 5.3E-25 T 17-10-2018 BJD13_17050 6bf9223f06bd0634f266f122ca123dd5 388 Gene3D G3DSA:2.30.130.10 9 70 1.4E-17 T 17-10-2018 IPR036974 PUA domain superfamily GO:0003723 BJD13_17050 6bf9223f06bd0634f266f122ca123dd5 388 SUPERFAMILY SSF88697 12 69 6.96E-11 T 17-10-2018 IPR015947 PUA-like superfamily BJD13_17050 6bf9223f06bd0634f266f122ca123dd5 388 Gene3D G3DSA:3.40.50.150 179 388 5.9E-69 T 17-10-2018 BJD13_13875 7df22aa4239ae7c94e232fd4d6042558 131 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 67 121 1.8E-15 T 17-10-2018 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 BJD13_17550 84ee1b82d96a0a0b6b42fbd9bb280822 209 Pfam PF00265 Thymidine kinase 2 185 3.5E-48 T 17-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 BJD13_17550 84ee1b82d96a0a0b6b42fbd9bb280822 209 SUPERFAMILY SSF52540 1 142 1.13E-39 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_17550 84ee1b82d96a0a0b6b42fbd9bb280822 209 SUPERFAMILY SSF57716 143 195 2.8E-13 T 17-10-2018 BJD13_17550 84ee1b82d96a0a0b6b42fbd9bb280822 209 Hamap MF_00124 Thymidine kinase [tdk]. 1 190 33.446 T 17-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 BJD13_17550 84ee1b82d96a0a0b6b42fbd9bb280822 209 Gene3D G3DSA:3.40.50.300 1 141 2.5E-25 T 17-10-2018 BJD13_17550 84ee1b82d96a0a0b6b42fbd9bb280822 209 PIRSF PIRSF035805 1 197 1.6E-50 T 17-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 BJD13_00435 a0d23c1f64ffab39c47da6bfb0eb315f 355 Pfam PF11348 Protein of unknown function (DUF3150) 11 285 1.3E-39 T 17-10-2018 IPR021496 Protein of unknown function DUF3150 BJD13_23345 7fb08ac6814ef97892495cfe991884af 700 Gene3D G3DSA:3.90.550.10 61 296 1.5E-48 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD13_23345 7fb08ac6814ef97892495cfe991884af 700 Pfam PF00535 Glycosyl transferase family 2 75 199 7.3E-26 T 17-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BJD13_23345 7fb08ac6814ef97892495cfe991884af 700 Gene3D G3DSA:3.40.50.2000 523 682 6.2E-18 T 17-10-2018 BJD13_23345 7fb08ac6814ef97892495cfe991884af 700 Pfam PF13692 Glycosyl transferases group 1 527 665 1.6E-26 T 17-10-2018 BJD13_23345 7fb08ac6814ef97892495cfe991884af 700 SUPERFAMILY SSF53448 62 317 4.33E-52 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD13_23345 7fb08ac6814ef97892495cfe991884af 700 SUPERFAMILY SSF53756 353 696 8.9E-24 T 17-10-2018 BJD13_01550 b16445cf00f59cb9f2c5e602249ff32d 725 Gene3D G3DSA:1.10.290.10 274 408 1.1E-127 T 17-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 BJD13_01550 b16445cf00f59cb9f2c5e602249ff32d 725 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 96 109 4.4E-16 T 17-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BJD13_01550 b16445cf00f59cb9f2c5e602249ff32d 725 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 187 205 4.4E-16 T 17-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BJD13_01550 b16445cf00f59cb9f2c5e602249ff32d 725 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 394 410 4.4E-16 T 17-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BJD13_01550 b16445cf00f59cb9f2c5e602249ff32d 725 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 307 316 4.4E-16 T 17-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BJD13_01550 b16445cf00f59cb9f2c5e602249ff32d 725 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 516 530 4.4E-16 T 17-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BJD13_01550 b16445cf00f59cb9f2c5e602249ff32d 725 SUPERFAMILY SSF56712 1 584 3.01E-147 T 17-10-2018 IPR023405 DNA topoisomerase, type IA, core domain BJD13_01550 b16445cf00f59cb9f2c5e602249ff32d 725 Gene3D G3DSA:2.70.20.10 211 483 1.1E-127 T 17-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 BJD13_01550 b16445cf00f59cb9f2c5e602249ff32d 725 Gene3D G3DSA:1.10.460.10 157 600 1.1E-127 T 17-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 BJD13_01550 b16445cf00f59cb9f2c5e602249ff32d 725 SMART SM00437 265 553 1.4E-43 T 17-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 BJD13_01550 b16445cf00f59cb9f2c5e602249ff32d 725 SMART SM00493 1 122 1.1E-15 T 17-10-2018 IPR006171 TOPRIM domain BJD13_01550 b16445cf00f59cb9f2c5e602249ff32d 725 SMART SM00436 122 217 1.4E-24 T 17-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 BJD13_01550 b16445cf00f59cb9f2c5e602249ff32d 725 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 613 4.0E-157 T 17-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 BJD13_01550 b16445cf00f59cb9f2c5e602249ff32d 725 Pfam PF01751 Toprim domain 3 127 2.2E-13 T 17-10-2018 IPR006171 TOPRIM domain BJD13_01550 b16445cf00f59cb9f2c5e602249ff32d 725 Gene3D G3DSA:3.40.50.140 1 148 3.5E-41 T 17-10-2018 BJD13_01550 b16445cf00f59cb9f2c5e602249ff32d 725 Pfam PF01131 DNA topoisomerase 150 579 2.1E-97 T 17-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BJD13_05410 8298fd1381af467c299033ce5863ad9a 210 PIRSF PIRSF000847 1 200 1.4E-44 T 17-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 BJD13_05410 8298fd1381af467c299033ce5863ad9a 210 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 17-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 BJD13_05410 8298fd1381af467c299033ce5863ad9a 210 Gene3D G3DSA:1.20.120.1760 2 144 1.1E-14 T 17-10-2018 BJD13_05410 8298fd1381af467c299033ce5863ad9a 210 Pfam PF01066 CDP-alcohol phosphatidyltransferase 5 71 2.2E-16 T 17-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 BJD13_05410 8298fd1381af467c299033ce5863ad9a 210 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 191 2.3E-52 T 17-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 BJD13_02590 ea1d6f2a66e7b6a82e0b62634842f564 421 Pfam PF00999 Sodium/hydrogen exchanger family 17 406 2.7E-55 T 17-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 BJD13_02590 ea1d6f2a66e7b6a82e0b62634842f564 421 Gene3D G3DSA:1.20.1530.20 7 413 7.1E-97 T 17-10-2018 IPR038770 Sodium/solute symporter superfamily BJD13_02355 4369ce580a4ff9b2ae68bbcddbe7a66c 200 SUPERFAMILY SSF55729 19 173 1.74E-15 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD13_02355 4369ce580a4ff9b2ae68bbcddbe7a66c 200 Gene3D G3DSA:3.40.630.30 17 194 4.2E-12 T 17-10-2018 BJD13_06235 56c89ce288ebae5c520ef0faf227cb42 393 Gene3D G3DSA:3.20.20.70 77 356 1.3E-104 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD13_06235 56c89ce288ebae5c520ef0faf227cb42 393 Pfam PF04055 Radical SAM superfamily 121 292 3.1E-17 T 17-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BJD13_06235 56c89ce288ebae5c520ef0faf227cb42 393 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 13 375 4.4E-133 T 17-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 BJD13_06235 56c89ce288ebae5c520ef0faf227cb42 393 SUPERFAMILY SSF102114 113 343 3.66E-15 T 17-10-2018 BJD13_06235 56c89ce288ebae5c520ef0faf227cb42 393 PIRSF PIRSF006004 11 384 1.2E-146 T 17-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 BJD13_06235 56c89ce288ebae5c520ef0faf227cb42 393 Gene3D G3DSA:1.10.150.530 14 75 5.7E-25 T 17-10-2018 BJD13_06235 56c89ce288ebae5c520ef0faf227cb42 393 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 14 371 73.588 T 17-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 BJD13_00090 46e388755aecad8ddacf7d636d9a0fb0 655 Gene3D G3DSA:3.40.50.300 214 413 3.4E-30 T 17-10-2018 BJD13_00090 46e388755aecad8ddacf7d636d9a0fb0 655 Pfam PF04851 Type III restriction enzyme, res subunit 257 400 1.1E-7 T 17-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 BJD13_00090 46e388755aecad8ddacf7d636d9a0fb0 655 Gene3D G3DSA:3.40.50.300 414 640 2.9E-42 T 17-10-2018 BJD13_00090 46e388755aecad8ddacf7d636d9a0fb0 655 SUPERFAMILY SSF52540 272 581 1.04E-33 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_00090 46e388755aecad8ddacf7d636d9a0fb0 655 SMART SM00487 254 428 4.3E-11 T 17-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BJD13_00090 46e388755aecad8ddacf7d636d9a0fb0 655 Pfam PF00271 Helicase conserved C-terminal domain 447 569 1.6E-12 T 17-10-2018 IPR001650 Helicase, C-terminal BJD13_00090 46e388755aecad8ddacf7d636d9a0fb0 655 SMART SM00490 487 569 1.5E-14 T 17-10-2018 IPR001650 Helicase, C-terminal BJD13_22705 b0e138aede7d2c75fa573118468e90a4 139 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 27 4.6E-9 T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD13_22705 b0e138aede7d2c75fa573118468e90a4 139 SUPERFAMILY SSF54523 7 136 1.36E-22 T 17-10-2018 BJD13_22705 b0e138aede7d2c75fa573118468e90a4 139 Pfam PF00114 Pilin (bacterial filament) 35 136 3.7E-21 T 17-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 BJD13_22705 b0e138aede7d2c75fa573118468e90a4 139 Gene3D G3DSA:3.30.700.10 7 137 1.8E-27 T 17-10-2018 BJD13_22705 b0e138aede7d2c75fa573118468e90a4 139 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD13_22705 b0e138aede7d2c75fa573118468e90a4 139 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 1.1E-9 T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD13_15785 e65bbcaa9fc075a275d8056c055694bd 115 Gene3D G3DSA:3.10.180.10 1 115 1.2E-18 T 17-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD13_15785 e65bbcaa9fc075a275d8056c055694bd 115 SUPERFAMILY SSF54593 6 114 1.88E-21 T 17-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD13_15785 e65bbcaa9fc075a275d8056c055694bd 115 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 109 2.8E-5 T 17-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BJD13_08245 77625500619ca145ba073e4e43745159 165 Pfam PF03918 Cytochrome C biogenesis protein 33 155 2.8E-47 T 17-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family BJD13_08245 77625500619ca145ba073e4e43745159 165 Gene3D G3DSA:1.10.8.640 42 127 6.8E-34 T 17-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily BJD13_02745 f8a218f389877bdfea0ebf6087b9126a 511 Pfam PF05787 Bacterial protein of unknown function (DUF839) 51 497 6.5E-88 T 17-10-2018 IPR008557 Protein of unknown function DUF839 BJD13_02745 f8a218f389877bdfea0ebf6087b9126a 511 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 8 29 1.3E-5 T 17-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal BJD13_22720 b9e3e27009ed8f1d5250d26e3135fdd0 297 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 5 284 6.3E-8 T 17-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD BJD13_03085 becfcd73f25a0677ca95f3cbd232c85e 312 Gene3D G3DSA:2.60.120.330 1 312 3.2E-109 T 17-10-2018 IPR027443 Isopenicillin N synthase-like BJD13_03085 becfcd73f25a0677ca95f3cbd232c85e 312 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 5 122 1.1E-29 T 17-10-2018 IPR026992 Non-haem dioxygenase N-terminal domain BJD13_03085 becfcd73f25a0677ca95f3cbd232c85e 312 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 173 271 4.1E-16 T 17-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 BJD13_03085 becfcd73f25a0677ca95f3cbd232c85e 312 PRINTS PR00682 Isopenicillin N synthase signature 191 212 1.7E-8 T 17-10-2018 BJD13_03085 becfcd73f25a0677ca95f3cbd232c85e 312 PRINTS PR00682 Isopenicillin N synthase signature 227 253 1.7E-8 T 17-10-2018 BJD13_03085 becfcd73f25a0677ca95f3cbd232c85e 312 PRINTS PR00682 Isopenicillin N synthase signature 24 41 1.7E-8 T 17-10-2018 BJD13_03085 becfcd73f25a0677ca95f3cbd232c85e 312 SUPERFAMILY SSF51197 3 308 9.61E-86 T 17-10-2018 BJD13_07710 859fb68c573d142991f88e361e52f458 790 Pfam PF14498 Glycosyl hydrolase family 65, N-terminal domain 47 281 8.7E-71 T 17-10-2018 IPR027414 Glycosyl hydrolase family 95, N-terminal domain KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807 BJD13_07710 859fb68c573d142991f88e361e52f458 790 SUPERFAMILY SSF48208 288 768 1.28E-85 T 17-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 BJD13_07710 859fb68c573d142991f88e361e52f458 790 Gene3D G3DSA:2.60.40.1180 324 765 3.9E-226 T 17-10-2018 IPR013780 Glycosyl hydrolase, all-beta BJD13_07710 859fb68c573d142991f88e361e52f458 790 Gene3D G3DSA:1.50.10.10 56 752 3.9E-226 T 17-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 BJD13_07710 859fb68c573d142991f88e361e52f458 790 PIRSF PIRSF007663 19 790 2.2E-300 T 17-10-2018 IPR016518 Alpha-L-fucosidase GO:0004560 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807 BJD13_07710 859fb68c573d142991f88e361e52f458 790 Gene3D G3DSA:2.70.98.50 60 323 3.9E-226 T 17-10-2018 BJD13_14065 c7d5435c65422a0ffcefb2623291dfc4 548 TIGRFAM TIGR01110 mdcA: malonate decarboxylase, alpha subunit 5 548 4.2E-299 T 17-10-2018 IPR005777 Acetyl-S-ACP:malonate ACP transferase MetaCyc: PWY-5794|MetaCyc: PWY-6060 BJD13_14065 c7d5435c65422a0ffcefb2623291dfc4 548 SUPERFAMILY SSF100950 28 274 8.37E-32 T 17-10-2018 IPR037171 NagB/RpiA transferase-like BJD13_14065 c7d5435c65422a0ffcefb2623291dfc4 548 Pfam PF16957 Malonate decarboxylase, alpha subunit, transporter 4 548 6.0E-303 T 17-10-2018 IPR005777 Acetyl-S-ACP:malonate ACP transferase MetaCyc: PWY-5794|MetaCyc: PWY-6060 BJD13_14065 c7d5435c65422a0ffcefb2623291dfc4 548 Gene3D G3DSA:3.40.1080.10 27 243 2.7E-16 T 17-10-2018 BJD13_14065 c7d5435c65422a0ffcefb2623291dfc4 548 SUPERFAMILY SSF100950 222 476 1.51E-21 T 17-10-2018 IPR037171 NagB/RpiA transferase-like BJD13_22270 c3be4439e02eead45261335e702ed3e1 338 SUPERFAMILY SSF53300 96 294 1.45E-35 T 17-10-2018 IPR036465 von Willebrand factor A-like domain superfamily BJD13_22270 c3be4439e02eead45261335e702ed3e1 338 Pfam PF00092 von Willebrand factor type A domain 101 291 8.0E-26 T 17-10-2018 IPR002035 von Willebrand factor, type A BJD13_22270 c3be4439e02eead45261335e702ed3e1 338 Gene3D G3DSA:3.40.50.410 98 298 9.9E-53 T 17-10-2018 IPR036465 von Willebrand factor A-like domain superfamily BJD13_22270 c3be4439e02eead45261335e702ed3e1 338 SMART SM00327 98 298 1.2E-22 T 17-10-2018 IPR002035 von Willebrand factor, type A BJD13_06055 40844f1e0a7cbed9ec8345ff70d4f50c 603 SUPERFAMILY SSF141868 353 595 1.83E-75 T 17-10-2018 IPR035919 EAL domain superfamily BJD13_06055 40844f1e0a7cbed9ec8345ff70d4f50c 603 Gene3D G3DSA:3.20.20.450 347 595 7.7E-82 T 17-10-2018 IPR035919 EAL domain superfamily BJD13_06055 40844f1e0a7cbed9ec8345ff70d4f50c 603 Gene3D G3DSA:3.30.450.40 36 170 1.2E-6 T 17-10-2018 IPR029016 GAF-like domain superfamily BJD13_06055 40844f1e0a7cbed9ec8345ff70d4f50c 603 Pfam PF00563 EAL domain 351 583 8.1E-66 T 17-10-2018 IPR001633 EAL domain BJD13_06055 40844f1e0a7cbed9ec8345ff70d4f50c 603 SUPERFAMILY SSF55073 180 320 4.39E-8 T 17-10-2018 IPR029787 Nucleotide cyclase BJD13_06055 40844f1e0a7cbed9ec8345ff70d4f50c 603 SUPERFAMILY SSF55781 38 168 1.45E-7 T 17-10-2018 BJD13_06055 40844f1e0a7cbed9ec8345ff70d4f50c 603 SMART SM00052 343 588 9.4E-89 T 17-10-2018 IPR001633 EAL domain BJD13_06055 40844f1e0a7cbed9ec8345ff70d4f50c 603 Gene3D G3DSA:3.30.70.270 177 346 9.7E-25 T 17-10-2018 BJD13_16230 c6820d470bc9e5c6a15f2513267635bf 284 Pfam PF04962 KduI/IolB family 72 273 6.4E-36 T 17-10-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 BJD13_16230 c6820d470bc9e5c6a15f2513267635bf 284 PIRSF PIRSF006625 5 284 1.2E-129 T 17-10-2018 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 BJD13_16230 c6820d470bc9e5c6a15f2513267635bf 284 Gene3D G3DSA:2.60.120.10 14 269 2.4E-110 T 17-10-2018 IPR014710 RmlC-like jelly roll fold BJD13_16230 c6820d470bc9e5c6a15f2513267635bf 284 Gene3D G3DSA:2.60.120.520 34 150 2.4E-110 T 17-10-2018 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 BJD13_16230 c6820d470bc9e5c6a15f2513267635bf 284 Hamap MF_00687 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [kduI]. 5 284 53.01 T 17-10-2018 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 BJD13_16230 c6820d470bc9e5c6a15f2513267635bf 284 SUPERFAMILY SSF51182 6 268 9.28E-98 T 17-10-2018 IPR011051 RmlC-like cupin domain superfamily BJD13_12135 e71e6eb4c4c5a4cea150c8a2a1d872f2 157 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 5 156 1.1E-50 T 17-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC BJD13_12135 e71e6eb4c4c5a4cea150c8a2a1d872f2 157 Gene3D G3DSA:3.90.960.10 1 157 2.9E-44 T 17-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 BJD13_12135 e71e6eb4c4c5a4cea150c8a2a1d872f2 157 Pfam PF04073 Aminoacyl-tRNA editing domain 35 145 6.5E-23 T 17-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 BJD13_12135 e71e6eb4c4c5a4cea150c8a2a1d872f2 157 SUPERFAMILY SSF55826 5 153 1.06E-37 T 17-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 BJD13_12135 e71e6eb4c4c5a4cea150c8a2a1d872f2 157 PIRSF PIRSF006181 1 157 5.1E-41 T 17-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC BJD13_14030 207221e103cb0cb61e9addfd03e7a2e2 451 Pfam PF03600 Citrate transporter 273 444 1.3E-8 T 17-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 BJD13_14030 207221e103cb0cb61e9addfd03e7a2e2 451 Pfam PF07158 Dicarboxylate carrier protein MatC N-terminus 1 149 4.0E-69 T 17-10-2018 IPR009827 Dicarboxylate carrier MatC N-terminal BJD13_08050 13d67ec6399f03f6b235a861f4c38ab4 208 Pfam PF01865 Protein of unknown function DUF47 60 203 2.2E-5 T 17-10-2018 IPR018445 Putative phosphate transport regulator BJD13_08050 13d67ec6399f03f6b235a861f4c38ab4 208 Gene3D G3DSA:1.20.58.220 14 208 1.7E-31 T 17-10-2018 IPR038078 PhoU-like domain superfamily BJD13_20915 322bf1c66bb55ba44307ce29a18887fc 468 SUPERFAMILY SSF47917 349 464 2.51E-54 T 17-10-2018 BJD13_20915 322bf1c66bb55ba44307ce29a18887fc 468 Gene3D G3DSA:2.40.10.170 1 73 1.0E-27 T 17-10-2018 BJD13_20915 322bf1c66bb55ba44307ce29a18887fc 468 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 464 56.279 T 17-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 BJD13_20915 322bf1c66bb55ba44307ce29a18887fc 468 SMART SM00382 140 331 0.0014 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_20915 322bf1c66bb55ba44307ce29a18887fc 468 Gene3D G3DSA:3.40.50.300 74 348 2.7E-110 T 17-10-2018 BJD13_20915 322bf1c66bb55ba44307ce29a18887fc 468 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 337 346 - T 17-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BJD13_20915 322bf1c66bb55ba44307ce29a18887fc 468 Gene3D G3DSA:1.10.1140.10 349 468 6.0E-60 T 17-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BJD13_20915 322bf1c66bb55ba44307ce29a18887fc 468 SUPERFAMILY SSF50615 1 71 5.23E-24 T 17-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BJD13_20915 322bf1c66bb55ba44307ce29a18887fc 468 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 70 1.7E-17 T 17-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BJD13_20915 322bf1c66bb55ba44307ce29a18887fc 468 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 128 346 1.3E-61 T 17-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BJD13_20915 322bf1c66bb55ba44307ce29a18887fc 468 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 464 1.1E-252 T 17-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 BJD13_20915 322bf1c66bb55ba44307ce29a18887fc 468 SUPERFAMILY SSF52540 75 352 2.2E-89 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_02835 3057ea5fede6b473ad953c6168697c51 446 SUPERFAMILY SSF118215 12 415 5.89E-103 T 17-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 BJD13_02835 3057ea5fede6b473ad953c6168697c51 446 PRINTS PR00173 Glutamate-aspartate symporter signature 370 390 1.1E-26 T 17-10-2018 BJD13_02835 3057ea5fede6b473ad953c6168697c51 446 PRINTS PR00173 Glutamate-aspartate symporter signature 206 225 1.1E-26 T 17-10-2018 BJD13_02835 3057ea5fede6b473ad953c6168697c51 446 PRINTS PR00173 Glutamate-aspartate symporter signature 308 334 1.1E-26 T 17-10-2018 BJD13_02835 3057ea5fede6b473ad953c6168697c51 446 PRINTS PR00173 Glutamate-aspartate symporter signature 343 362 1.1E-26 T 17-10-2018 BJD13_02835 3057ea5fede6b473ad953c6168697c51 446 PRINTS PR00173 Glutamate-aspartate symporter signature 48 68 1.1E-26 T 17-10-2018 BJD13_02835 3057ea5fede6b473ad953c6168697c51 446 PRINTS PR00173 Glutamate-aspartate symporter signature 6 26 1.1E-26 T 17-10-2018 BJD13_02835 3057ea5fede6b473ad953c6168697c51 446 PRINTS PR00173 Glutamate-aspartate symporter signature 159 181 1.1E-26 T 17-10-2018 BJD13_02835 3057ea5fede6b473ad953c6168697c51 446 PRINTS PR00173 Glutamate-aspartate symporter signature 78 103 1.1E-26 T 17-10-2018 BJD13_02835 3057ea5fede6b473ad953c6168697c51 446 Pfam PF00375 Sodium:dicarboxylate symporter family 13 415 5.2E-113 T 17-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BJD13_02835 3057ea5fede6b473ad953c6168697c51 446 Gene3D G3DSA:1.10.3860.10 1 432 1.5E-119 T 17-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 BJD13_12790 fe22ceb1ae9c451b9c9ce3021d18969d 145 Pfam PF05258 Protein of unknown function (DUF721) 28 91 6.1E-11 T 17-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 BJD13_10605 77df73147d2c4feb4aa347cb30a92636 267 Gene3D G3DSA:3.40.50.300 4 228 8.2E-22 T 17-10-2018 BJD13_10605 77df73147d2c4feb4aa347cb30a92636 267 SUPERFAMILY SSF52540 3 252 4.32E-23 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_10605 77df73147d2c4feb4aa347cb30a92636 267 Pfam PF13469 Sulfotransferase family 5 201 3.3E-17 T 17-10-2018 BJD13_19475 46f75904eb3c9a70d5d0cd1a06208764 403 Gene3D G3DSA:1.10.240.10 222 322 1.0E-10 T 17-10-2018 BJD13_19475 46f75904eb3c9a70d5d0cd1a06208764 403 Gene3D G3DSA:3.40.50.620 4 217 4.4E-75 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD13_19475 46f75904eb3c9a70d5d0cd1a06208764 403 SMART SM00363 339 401 0.0018 T 17-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_19475 46f75904eb3c9a70d5d0cd1a06208764 403 Gene3D G3DSA:3.10.290.10 326 400 3.2E-19 T 17-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 BJD13_19475 46f75904eb3c9a70d5d0cd1a06208764 403 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 400 46.205 T 17-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 BJD13_19475 46f75904eb3c9a70d5d0cd1a06208764 403 SUPERFAMILY SSF55174 331 400 8.77E-17 T 17-10-2018 BJD13_19475 46f75904eb3c9a70d5d0cd1a06208764 403 SUPERFAMILY SSF52374 4 314 2.05E-89 T 17-10-2018 BJD13_19475 46f75904eb3c9a70d5d0cd1a06208764 403 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 1.5E-25 T 17-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 BJD13_19475 46f75904eb3c9a70d5d0cd1a06208764 403 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 1.5E-25 T 17-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 BJD13_19475 46f75904eb3c9a70d5d0cd1a06208764 403 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 1.5E-25 T 17-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 BJD13_19475 46f75904eb3c9a70d5d0cd1a06208764 403 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 1.5E-25 T 17-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 BJD13_19475 46f75904eb3c9a70d5d0cd1a06208764 403 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 8 398 7.6E-111 T 17-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 BJD13_19475 46f75904eb3c9a70d5d0cd1a06208764 403 Pfam PF00579 tRNA synthetases class I (W and Y) 32 312 7.9E-72 T 17-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD13_19475 46f75904eb3c9a70d5d0cd1a06208764 403 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 17-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD13_23065 501ebea96c1f7f6e8b5564225277c917 715 Pfam PF05506 Domain of unknown function (DUF756) 616 676 2.2E-7 T 17-10-2018 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 BJD13_23065 501ebea96c1f7f6e8b5564225277c917 715 Pfam PF05506 Domain of unknown function (DUF756) 514 597 5.4E-15 T 17-10-2018 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 BJD13_23065 501ebea96c1f7f6e8b5564225277c917 715 Pfam PF04185 Phosphoesterase family 44 443 3.4E-112 T 17-10-2018 IPR007312 Phosphoesterase GO:0016788 BJD13_23065 501ebea96c1f7f6e8b5564225277c917 715 Gene3D G3DSA:3.40.720.10 33 196 1.1E-24 T 17-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 BJD13_23065 501ebea96c1f7f6e8b5564225277c917 715 TIGRFAM TIGR03396 PC_PLC: phospholipase C, phosphocholine-specific 6 698 4.0E-256 T 17-10-2018 IPR017767 Bacterial phospholipase C, phosphocholine-specific GO:0034480 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 BJD13_04790 4884d35972e4a9e42b3500a0348fce09 214 SMART SM00382 36 213 1.4E-6 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_04790 4884d35972e4a9e42b3500a0348fce09 214 Pfam PF00005 ABC transporter 30 165 1.9E-24 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD13_04790 4884d35972e4a9e42b3500a0348fce09 214 Gene3D G3DSA:3.40.50.300 6 213 2.8E-39 T 17-10-2018 BJD13_04790 4884d35972e4a9e42b3500a0348fce09 214 SUPERFAMILY SSF52540 10 211 2.27E-39 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_04790 4884d35972e4a9e42b3500a0348fce09 214 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD13_04790 4884d35972e4a9e42b3500a0348fce09 214 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 12 204 7.8E-70 T 17-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 BJD13_04360 3aee5b7f233a0fa94390ac9c721b5952 420 Pfam PF06057 Bacterial virulence protein (VirJ) 218 408 4.9E-84 T 17-10-2018 IPR010333 Bacterial virulence BJD13_04360 3aee5b7f233a0fa94390ac9c721b5952 420 Gene3D G3DSA:3.40.50.1820 210 416 1.6E-8 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_04360 3aee5b7f233a0fa94390ac9c721b5952 420 Gene3D G3DSA:3.40.50.1820 31 209 1.4E-5 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_04360 3aee5b7f233a0fa94390ac9c721b5952 420 PIRSF PIRSF029063 2 169 1.4E-42 T 17-10-2018 IPR011225 Type IV secretory pathway, VirJ component BJD13_04360 3aee5b7f233a0fa94390ac9c721b5952 420 PIRSF PIRSF029063 154 413 1.1E-112 T 17-10-2018 IPR011225 Type IV secretory pathway, VirJ component BJD13_04360 3aee5b7f233a0fa94390ac9c721b5952 420 SUPERFAMILY SSF53474 40 193 1.71E-5 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_04360 3aee5b7f233a0fa94390ac9c721b5952 420 SUPERFAMILY SSF53474 213 405 8.7E-21 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_02430 6d627b084ff8f0bdbc6fa6708b2ff7c1 405 SUPERFAMILY SSF103473 9 393 5.49E-58 T 17-10-2018 IPR036259 MFS transporter superfamily BJD13_02430 6d627b084ff8f0bdbc6fa6708b2ff7c1 405 Gene3D G3DSA:1.20.1250.20 12 387 3.7E-47 T 17-10-2018 BJD13_02430 6d627b084ff8f0bdbc6fa6708b2ff7c1 405 Pfam PF07690 Major Facilitator Superfamily 20 329 9.0E-37 T 17-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD13_13125 d6d752a674e1440a126fa94866520aa8 556 Gene3D G3DSA:3.50.50.60 4 531 1.2E-172 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_13125 d6d752a674e1440a126fa94866520aa8 556 Gene3D G3DSA:4.10.450.10 38 201 1.2E-172 T 17-10-2018 IPR027424 Glucose Oxidase, domain 2 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 BJD13_13125 d6d752a674e1440a126fa94866520aa8 556 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 261 275 - T 17-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 BJD13_13125 d6d752a674e1440a126fa94866520aa8 556 Gene3D G3DSA:3.30.410.40 154 476 1.2E-172 T 17-10-2018 BJD13_13125 d6d752a674e1440a126fa94866520aa8 556 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 84 107 - T 17-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 BJD13_13125 d6d752a674e1440a126fa94866520aa8 556 Pfam PF00732 GMC oxidoreductase 5 302 9.5E-97 T 17-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 BJD13_13125 d6d752a674e1440a126fa94866520aa8 556 Hamap MF_00750 Oxygen-dependent choline dehydrogenase [betA]. 3 556 60.546 T 17-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 BJD13_13125 d6d752a674e1440a126fa94866520aa8 556 SUPERFAMILY SSF54373 297 479 4.51E-61 T 17-10-2018 BJD13_13125 d6d752a674e1440a126fa94866520aa8 556 SUPERFAMILY SSF51905 1 537 5.34E-86 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_13125 d6d752a674e1440a126fa94866520aa8 556 PIRSF PIRSF000137 1 537 1.4E-133 T 17-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 BJD13_13125 d6d752a674e1440a126fa94866520aa8 556 Gene3D G3DSA:1.10.1220.110 99 153 1.2E-172 T 17-10-2018 BJD13_13125 d6d752a674e1440a126fa94866520aa8 556 Pfam PF05199 GMC oxidoreductase 395 529 2.6E-40 T 17-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 BJD13_13125 d6d752a674e1440a126fa94866520aa8 556 TIGRFAM TIGR01810 betA: choline dehydrogenase 6 539 4.2E-272 T 17-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 BJD13_05175 5386ee8314281b5b6ec0998db2401f97 358 Pfam PF00561 alpha/beta hydrolase fold 68 331 2.3E-22 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD13_05175 5386ee8314281b5b6ec0998db2401f97 358 TIGRFAM TIGR01836 PHA_synth_III_C: poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit 7 354 1.1E-174 T 17-10-2018 IPR010125 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit GO:0016746|GO:0042619 BJD13_05175 5386ee8314281b5b6ec0998db2401f97 358 SUPERFAMILY SSF53474 37 352 6.16E-33 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_05175 5386ee8314281b5b6ec0998db2401f97 358 Gene3D G3DSA:3.40.50.1820 50 353 7.7E-19 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_19020 d330ced459c19791561f60b25bd2bd30 307 Pfam PF00491 Arginase family 8 299 3.6E-76 T 17-10-2018 IPR006035 Ureohydrolase GO:0046872 BJD13_19020 d330ced459c19791561f60b25bd2bd30 307 SUPERFAMILY SSF52768 8 302 1.31E-90 T 17-10-2018 IPR023696 Ureohydrolase domain superfamily BJD13_19020 d330ced459c19791561f60b25bd2bd30 307 PIRSF PIRSF036979 2 303 2.3E-33 T 17-10-2018 IPR006035 Ureohydrolase GO:0046872 BJD13_19020 d330ced459c19791561f60b25bd2bd30 307 Gene3D G3DSA:3.40.800.10 7 304 1.3E-95 T 17-10-2018 BJD13_19020 d330ced459c19791561f60b25bd2bd30 307 TIGRFAM TIGR01229 rocF_arginase: arginase 9 303 1.9E-88 T 17-10-2018 IPR014033 Arginase GO:0004053|GO:0006525|GO:0046872 KEGG: 00220+3.5.3.1|KEGG: 00330+3.5.3.1|MetaCyc: PWY-31|MetaCyc: PWY-4984|MetaCyc: PWY-6305|MetaCyc: PWY-6922|Reactome: R-HSA-70635 BJD13_19020 d330ced459c19791561f60b25bd2bd30 307 ProSitePatterns PS01053 Arginase family signature. 229 250 - T 17-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 BJD13_19020 d330ced459c19791561f60b25bd2bd30 307 PRINTS PR00116 Arginase signature 97 112 4.4E-45 T 17-10-2018 IPR006035 Ureohydrolase GO:0046872 BJD13_19020 d330ced459c19791561f60b25bd2bd30 307 PRINTS PR00116 Arginase signature 261 275 4.4E-45 T 17-10-2018 IPR006035 Ureohydrolase GO:0046872 BJD13_19020 d330ced459c19791561f60b25bd2bd30 307 PRINTS PR00116 Arginase signature 226 255 4.4E-45 T 17-10-2018 IPR006035 Ureohydrolase GO:0046872 BJD13_19020 d330ced459c19791561f60b25bd2bd30 307 PRINTS PR00116 Arginase signature 124 151 4.4E-45 T 17-10-2018 IPR006035 Ureohydrolase GO:0046872 BJD13_19020 d330ced459c19791561f60b25bd2bd30 307 PRINTS PR00116 Arginase signature 178 196 4.4E-45 T 17-10-2018 IPR006035 Ureohydrolase GO:0046872 BJD13_21160 d4e868b77a90297e641a35592ac84791 314 Gene3D G3DSA:3.40.50.720 7 268 9.2E-44 T 17-10-2018 BJD13_21160 d4e868b77a90297e641a35592ac84791 314 SUPERFAMILY SSF51735 7 266 1.56E-48 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_21160 d4e868b77a90297e641a35592ac84791 314 Pfam PF01370 NAD dependent epimerase/dehydratase family 8 215 1.9E-19 T 17-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 BJD13_12730 66dab81401876a726b28aea94280a2a8 475 SUPERFAMILY SSF51011 395 473 2.09E-6 T 17-10-2018 BJD13_12730 66dab81401876a726b28aea94280a2a8 475 PRINTS PR00110 Alpha-amylase signature 110 121 2.9E-15 T 17-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 BJD13_12730 66dab81401876a726b28aea94280a2a8 475 PRINTS PR00110 Alpha-amylase signature 318 330 2.9E-15 T 17-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 BJD13_12730 66dab81401876a726b28aea94280a2a8 475 PRINTS PR00110 Alpha-amylase signature 223 234 2.9E-15 T 17-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 BJD13_12730 66dab81401876a726b28aea94280a2a8 475 PRINTS PR00110 Alpha-amylase signature 252 270 2.9E-15 T 17-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 BJD13_12730 66dab81401876a726b28aea94280a2a8 475 PRINTS PR00110 Alpha-amylase signature 77 94 2.9E-15 T 17-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 BJD13_12730 66dab81401876a726b28aea94280a2a8 475 Gene3D G3DSA:3.20.20.80 31 395 1.2E-71 T 17-10-2018 BJD13_12730 66dab81401876a726b28aea94280a2a8 475 Pfam PF00128 Alpha amylase, catalytic domain 60 238 1.6E-10 T 17-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BJD13_12730 66dab81401876a726b28aea94280a2a8 475 SUPERFAMILY SSF51445 31 392 2.7E-60 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily BJD13_12730 66dab81401876a726b28aea94280a2a8 475 SMART SM00642 36 384 1.2E-27 T 17-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BJD13_03145 3ebb41e2defba6e29a64fc803d219eb9 435 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 24 435 8.2E-182 T 17-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_03145 3ebb41e2defba6e29a64fc803d219eb9 435 Gene3D G3DSA:1.10.645.20 22 435 1.8E-169 T 17-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_03145 3ebb41e2defba6e29a64fc803d219eb9 435 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 61 72 - T 17-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_03145 3ebb41e2defba6e29a64fc803d219eb9 435 SUPERFAMILY SSF56762 34 435 8.37E-135 T 17-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_03145 3ebb41e2defba6e29a64fc803d219eb9 435 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 17 435 49.043 T 17-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_03145 3ebb41e2defba6e29a64fc803d219eb9 435 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 138 435 3.9E-119 T 17-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_15540 c33bddb5a9c16f139bef876125b219f3 296 SUPERFAMILY SSF88713 4 295 1.0E-80 T 17-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 BJD13_15540 c33bddb5a9c16f139bef876125b219f3 296 Pfam PF01522 Polysaccharide deacetylase 74 182 2.5E-10 T 17-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 BJD13_15540 c33bddb5a9c16f139bef876125b219f3 296 TIGRFAM TIGR03212 uraD_N-term-dom: putative urate catabolism protein 4 296 1.8E-157 T 17-10-2018 IPR017625 PuuE allantoinase/chitin deacetylase 1 BJD13_15540 c33bddb5a9c16f139bef876125b219f3 296 Gene3D G3DSA:3.20.20.370 1 296 4.6E-90 T 17-10-2018 BJD13_04885 ec30c751d96ec7142cca9c26a539e24c 179 Gene3D G3DSA:3.40.630.30 3 176 3.2E-48 T 17-10-2018 BJD13_04885 ec30c751d96ec7142cca9c26a539e24c 179 Pfam PF13420 Acetyltransferase (GNAT) domain 5 156 5.6E-26 T 17-10-2018 BJD13_04885 ec30c751d96ec7142cca9c26a539e24c 179 SUPERFAMILY SSF55729 1 164 2.23E-31 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD13_01195 ea58f66449d8bb304bfb8961a83b751a 460 Gene3D G3DSA:1.10.1220.10 403 429 2.9E-6 T 17-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 BJD13_01055 ea58f66449d8bb304bfb8961a83b751a 460 Gene3D G3DSA:1.10.1220.10 403 429 2.9E-6 T 17-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 SUPERFAMILY SSF51126 1425 1664 1.44E-15 T 17-10-2018 IPR011050 Pectin lyase fold/virulence factor BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 24 1.1E-5 T 17-10-2018 IPR024973 ESPR domain BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 SUPERFAMILY SSF51126 483 738 7.22E-23 T 17-10-2018 IPR011050 Pectin lyase fold/virulence factor BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 SUPERFAMILY SSF51126 747 996 7.85E-22 T 17-10-2018 IPR011050 Pectin lyase fold/virulence factor BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 SUPERFAMILY SSF51126 996 1415 4.08E-39 T 17-10-2018 IPR011050 Pectin lyase fold/virulence factor BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 Pfam PF12951 Passenger-associated-transport-repeat 593 621 1.5E-8 T 17-10-2018 IPR013425 Autotransporter-associated beta strand repeat BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 Pfam PF12951 Passenger-associated-transport-repeat 2375 2404 1.2E-4 T 17-10-2018 IPR013425 Autotransporter-associated beta strand repeat BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 Pfam PF12951 Passenger-associated-transport-repeat 764 793 1.2E-6 T 17-10-2018 IPR013425 Autotransporter-associated beta strand repeat BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 Pfam PF12951 Passenger-associated-transport-repeat 2740 2766 3.7E-6 T 17-10-2018 IPR013425 Autotransporter-associated beta strand repeat BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 Pfam PF12951 Passenger-associated-transport-repeat 2867 2897 2.4E-7 T 17-10-2018 IPR013425 Autotransporter-associated beta strand repeat BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 Pfam PF12951 Passenger-associated-transport-repeat 1364 1393 4.8E-6 T 17-10-2018 IPR013425 Autotransporter-associated beta strand repeat BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 Pfam PF12951 Passenger-associated-transport-repeat 1997 2025 2.6E-7 T 17-10-2018 IPR013425 Autotransporter-associated beta strand repeat BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 Pfam PF12951 Passenger-associated-transport-repeat 2675 2703 1.2E-7 T 17-10-2018 IPR013425 Autotransporter-associated beta strand repeat BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 Pfam PF12951 Passenger-associated-transport-repeat 938 965 1.2E-4 T 17-10-2018 IPR013425 Autotransporter-associated beta strand repeat BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 Pfam PF12951 Passenger-associated-transport-repeat 2547 2575 1.7E-7 T 17-10-2018 IPR013425 Autotransporter-associated beta strand repeat BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 Pfam PF12951 Passenger-associated-transport-repeat 678 707 7.7E-7 T 17-10-2018 IPR013425 Autotransporter-associated beta strand repeat BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 Pfam PF12951 Passenger-associated-transport-repeat 1107 1136 6.5E-8 T 17-10-2018 IPR013425 Autotransporter-associated beta strand repeat BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 Pfam PF12951 Passenger-associated-transport-repeat 1279 1307 1.8E-5 T 17-10-2018 IPR013425 Autotransporter-associated beta strand repeat BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 Pfam PF12951 Passenger-associated-transport-repeat 1021 1050 3.1E-6 T 17-10-2018 IPR013425 Autotransporter-associated beta strand repeat BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 Pfam PF12951 Passenger-associated-transport-repeat 1450 1478 1.4E-9 T 17-10-2018 IPR013425 Autotransporter-associated beta strand repeat BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 Pfam PF12951 Passenger-associated-transport-repeat 1192 1221 3.1E-5 T 17-10-2018 IPR013425 Autotransporter-associated beta strand repeat BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 Pfam PF12951 Passenger-associated-transport-repeat 2803 2831 2.7E-7 T 17-10-2018 IPR013425 Autotransporter-associated beta strand repeat BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 Pfam PF12951 Passenger-associated-transport-repeat 2461 2490 2.8E-9 T 17-10-2018 IPR013425 Autotransporter-associated beta strand repeat BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 Pfam PF12951 Passenger-associated-transport-repeat 506 533 1.2E-5 T 17-10-2018 IPR013425 Autotransporter-associated beta strand repeat BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 Pfam PF12951 Passenger-associated-transport-repeat 1543 1569 0.0026 T 17-10-2018 IPR013425 Autotransporter-associated beta strand repeat BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 Pfam PF12951 Passenger-associated-transport-repeat 1827 1854 2.5E-4 T 17-10-2018 IPR013425 Autotransporter-associated beta strand repeat BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 Pfam PF12951 Passenger-associated-transport-repeat 2612 2638 1.4E-6 T 17-10-2018 IPR013425 Autotransporter-associated beta strand repeat BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 Pfam PF12951 Passenger-associated-transport-repeat 2092 2120 0.015 T 17-10-2018 IPR013425 Autotransporter-associated beta strand repeat BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 Pfam PF12951 Passenger-associated-transport-repeat 856 879 0.013 T 17-10-2018 IPR013425 Autotransporter-associated beta strand repeat BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 Pfam PF12951 Passenger-associated-transport-repeat 1911 1940 5.0E-6 T 17-10-2018 IPR013425 Autotransporter-associated beta strand repeat BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 SMART SM00869 3126 3387 9.3E-36 T 17-10-2018 IPR005546 Autotransporter beta-domain BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 SUPERFAMILY SSF51126 1662 1965 4.39E-19 T 17-10-2018 IPR011050 Pectin lyase fold/virulence factor BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 SUPERFAMILY SSF103515 3090 3397 3.79E-52 T 17-10-2018 IPR036709 Autotransporter beta-domain superfamily BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 Gene3D G3DSA:2.160.20.20 2487 2650 8.9E-6 T 17-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 2546 2575 1.7E-6 T 17-10-2018 IPR013425 Autotransporter-associated beta strand repeat BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 2738 2766 4.3E-8 T 17-10-2018 IPR013425 Autotransporter-associated beta strand repeat BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 591 622 1.5E-9 T 17-10-2018 IPR013425 Autotransporter-associated beta strand repeat BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1363 1394 4.4E-7 T 17-10-2018 IPR013425 Autotransporter-associated beta strand repeat BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1191 1222 2.4E-8 T 17-10-2018 IPR013425 Autotransporter-associated beta strand repeat BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 2091 2122 3.0E-5 T 17-10-2018 IPR013425 Autotransporter-associated beta strand repeat BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 677 708 5.0E-8 T 17-10-2018 IPR013425 Autotransporter-associated beta strand repeat BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 2610 2638 4.2E-8 T 17-10-2018 IPR013425 Autotransporter-associated beta strand repeat BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 2867 2898 1.2E-9 T 17-10-2018 IPR013425 Autotransporter-associated beta strand repeat BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1020 1051 9.2E-8 T 17-10-2018 IPR013425 Autotransporter-associated beta strand repeat BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1996 2025 6.5E-8 T 17-10-2018 IPR013425 Autotransporter-associated beta strand repeat BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 2374 2405 1.6E-6 T 17-10-2018 IPR013425 Autotransporter-associated beta strand repeat BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 763 793 3.2E-9 T 17-10-2018 IPR013425 Autotransporter-associated beta strand repeat BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 2460 2490 3.6E-9 T 17-10-2018 IPR013425 Autotransporter-associated beta strand repeat BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 505 534 9.2E-7 T 17-10-2018 IPR013425 Autotransporter-associated beta strand repeat BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1910 1941 9.4E-5 T 17-10-2018 IPR013425 Autotransporter-associated beta strand repeat BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1543 1570 9.1E-5 T 17-10-2018 IPR013425 Autotransporter-associated beta strand repeat BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1106 1137 8.0E-10 T 17-10-2018 IPR013425 Autotransporter-associated beta strand repeat BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1280 1308 1.3E-6 T 17-10-2018 IPR013425 Autotransporter-associated beta strand repeat BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 2674 2703 3.7E-9 T 17-10-2018 IPR013425 Autotransporter-associated beta strand repeat BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1449 1479 2.0E-10 T 17-10-2018 IPR013425 Autotransporter-associated beta strand repeat BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1824 1855 6.7E-7 T 17-10-2018 IPR013425 Autotransporter-associated beta strand repeat BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 2803 2831 7.7E-6 T 17-10-2018 IPR013425 Autotransporter-associated beta strand repeat BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 SUPERFAMILY SSF51126 2079 2428 4.71E-22 T 17-10-2018 IPR011050 Pectin lyase fold/virulence factor BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 SUPERFAMILY SSF51126 2838 3012 4.39E-12 T 17-10-2018 IPR011050 Pectin lyase fold/virulence factor BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 SUPERFAMILY SSF51126 2436 2716 1.51E-29 T 17-10-2018 IPR011050 Pectin lyase fold/virulence factor BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 SUPERFAMILY SSF51126 132 483 3.77E-8 T 17-10-2018 IPR011050 Pectin lyase fold/virulence factor BJD13_06050 1288aa7496acd195dced6f7c2cfcc5f3 3397 SUPERFAMILY SSF51126 2651 2855 1.95E-16 T 17-10-2018 IPR011050 Pectin lyase fold/virulence factor BJD13_06550 6b814d7b11b0b8570710c0abf9d537a3 405 SUPERFAMILY SSF53335 26 405 1.05E-83 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_06550 6b814d7b11b0b8570710c0abf9d537a3 405 Gene3D G3DSA:3.40.50.720 34 152 2.2E-85 T 17-10-2018 BJD13_06550 6b814d7b11b0b8570710c0abf9d537a3 405 Gene3D G3DSA:3.40.50.150 206 405 2.9E-49 T 17-10-2018 BJD13_06550 6b814d7b11b0b8570710c0abf9d537a3 405 Pfam PF05050 Methyltransferase FkbM domain 228 363 7.2E-10 T 17-10-2018 IPR006342 Methyltransferase FkbM BJD13_06550 6b814d7b11b0b8570710c0abf9d537a3 405 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 226 363 2.8E-14 T 17-10-2018 IPR006342 Methyltransferase FkbM BJD13_06550 6b814d7b11b0b8570710c0abf9d537a3 405 Gene3D G3DSA:1.20.1270.160 12 205 2.2E-85 T 17-10-2018 BJD13_05845 adb47f1b5c933f60562272cbb3cbf70c 342 Pfam PF06812 ImpA, N-terminal, type VI secretion system 9 132 2.7E-30 T 17-10-2018 IPR010657 ImpA, N-terminal BJD13_05845 adb47f1b5c933f60562272cbb3cbf70c 342 TIGRFAM TIGR03363 VI_chp_8: type VI secretion-associated protein, ImpA family 5 336 1.7E-66 T 17-10-2018 IPR017740 Type VI secretion system-associated, ImpA BJD13_05875 7f941bfb48503f21c5dce56f1fd83e29 1152 Pfam PF14331 ImcF-related N-terminal domain 200 456 2.3E-89 T 17-10-2018 IPR025743 ImcF-related, N-terminal domain BJD13_05875 7f941bfb48503f21c5dce56f1fd83e29 1152 Gene3D G3DSA:3.40.50.300 128 302 1.4E-6 T 17-10-2018 BJD13_05875 7f941bfb48503f21c5dce56f1fd83e29 1152 SUPERFAMILY SSF52540 134 288 7.16E-11 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_05875 7f941bfb48503f21c5dce56f1fd83e29 1152 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 15 1152 0.0 T 17-10-2018 IPR017731 Type VI secretion system, IcmF BJD13_05875 7f941bfb48503f21c5dce56f1fd83e29 1152 Pfam PF06744 Type VI secretion protein IcmF C-terminal 908 1104 8.8E-46 T 17-10-2018 IPR010623 Type VI secretion system IcmF, C-terminal BJD13_05875 7f941bfb48503f21c5dce56f1fd83e29 1152 Pfam PF06761 Intracellular multiplication and human macrophage-killing 513 808 3.3E-56 T 17-10-2018 IPR009612 ImcF-related BJD13_07640 1e9060d18b43dfe01354715e932fc9ba 504 Gene3D G3DSA:1.10.1390.10 466 504 4.4E-13 T 17-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD13_07640 1e9060d18b43dfe01354715e932fc9ba 504 SUPERFAMILY SSF53697 2 496 3.06E-152 T 17-10-2018 BJD13_07640 1e9060d18b43dfe01354715e932fc9ba 504 Pfam PF00342 Phosphoglucose isomerase 47 487 8.9E-150 T 17-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD13_07640 1e9060d18b43dfe01354715e932fc9ba 504 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 456 473 - T 17-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD13_07640 1e9060d18b43dfe01354715e932fc9ba 504 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 40 483 37.782 T 17-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD13_07640 1e9060d18b43dfe01354715e932fc9ba 504 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 243 256 - T 17-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD13_07640 1e9060d18b43dfe01354715e932fc9ba 504 PRINTS PR00662 Glucose-6-phosphate isomerase signature 442 456 1.8E-45 T 17-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD13_07640 1e9060d18b43dfe01354715e932fc9ba 504 PRINTS PR00662 Glucose-6-phosphate isomerase signature 316 337 1.8E-45 T 17-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD13_07640 1e9060d18b43dfe01354715e932fc9ba 504 PRINTS PR00662 Glucose-6-phosphate isomerase signature 424 442 1.8E-45 T 17-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD13_07640 1e9060d18b43dfe01354715e932fc9ba 504 PRINTS PR00662 Glucose-6-phosphate isomerase signature 456 469 1.8E-45 T 17-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD13_07640 1e9060d18b43dfe01354715e932fc9ba 504 PRINTS PR00662 Glucose-6-phosphate isomerase signature 134 153 1.8E-45 T 17-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD13_07640 1e9060d18b43dfe01354715e932fc9ba 504 PRINTS PR00662 Glucose-6-phosphate isomerase signature 239 257 1.8E-45 T 17-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD13_07640 1e9060d18b43dfe01354715e932fc9ba 504 Gene3D G3DSA:3.40.50.10490 92 269 2.3E-166 T 17-10-2018 BJD13_07640 1e9060d18b43dfe01354715e932fc9ba 504 Gene3D G3DSA:3.40.50.10490 8 465 2.3E-166 T 17-10-2018 BJD13_18185 2fa1ba6799408fc45ca93e7f1eeee629 212 SUPERFAMILY SSF53335 22 210 8.68E-36 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_18185 2fa1ba6799408fc45ca93e7f1eeee629 212 Gene3D G3DSA:3.40.50.150 3 212 4.4E-63 T 17-10-2018 BJD13_18185 2fa1ba6799408fc45ca93e7f1eeee629 212 PIRSF PIRSF003078 1 212 2.4E-73 T 17-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 BJD13_18185 2fa1ba6799408fc45ca93e7f1eeee629 212 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 32 211 2.2E-53 T 17-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 BJD13_18185 2fa1ba6799408fc45ca93e7f1eeee629 212 Pfam PF02527 rRNA small subunit methyltransferase G 31 207 4.9E-52 T 17-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 BJD13_18185 2fa1ba6799408fc45ca93e7f1eeee629 212 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 20 208 26.343 T 17-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 BJD13_19970 cc2350c061af0336a83c9525ba37353f 377 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 173 369 38.28 T 17-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 BJD13_19970 cc2350c061af0336a83c9525ba37353f 377 Gene3D G3DSA:3.40.50.10990 176 346 3.6E-56 T 17-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 BJD13_19970 cc2350c061af0336a83c9525ba37353f 377 Pfam PF00925 GTP cyclohydrolase II 180 342 3.7E-51 T 17-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 BJD13_19970 cc2350c061af0336a83c9525ba37353f 377 SUPERFAMILY SSF142695 188 344 5.23E-48 T 17-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 BJD13_19970 cc2350c061af0336a83c9525ba37353f 377 PIRSF PIRSF001259 23 377 1.6E-87 T 17-10-2018 BJD13_05045 1a267f75c15fce0eb098dcd6fc6b464f 307 Gene3D G3DSA:1.10.10.10 1 84 1.3E-20 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_05045 1a267f75c15fce0eb098dcd6fc6b464f 307 Gene3D G3DSA:3.40.190.290 98 303 4.9E-39 T 17-10-2018 BJD13_05045 1a267f75c15fce0eb098dcd6fc6b464f 307 SUPERFAMILY SSF53850 99 299 1.57E-37 T 17-10-2018 BJD13_05045 1a267f75c15fce0eb098dcd6fc6b464f 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 5.2E-6 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_05045 1a267f75c15fce0eb098dcd6fc6b464f 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 5.2E-6 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_05045 1a267f75c15fce0eb098dcd6fc6b464f 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 5.2E-6 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_05045 1a267f75c15fce0eb098dcd6fc6b464f 307 Pfam PF03466 LysR substrate binding domain 98 299 1.3E-41 T 17-10-2018 IPR005119 LysR, substrate-binding BJD13_05045 1a267f75c15fce0eb098dcd6fc6b464f 307 SUPERFAMILY SSF46785 1 118 3.77E-22 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_05045 1a267f75c15fce0eb098dcd6fc6b464f 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.4E-16 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_06220 daa54f0e4c0d680466ba7b32da592441 212 SUPERFAMILY SSF48452 94 183 1.49E-9 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_06220 daa54f0e4c0d680466ba7b32da592441 212 Pfam PF09976 Tetratricopeptide repeat-like domain 17 202 2.1E-38 T 17-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 BJD13_06220 daa54f0e4c0d680466ba7b32da592441 212 Gene3D G3DSA:1.25.40.10 31 191 2.2E-10 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_15830 f24a9fa9bbd551d4989141d86171d17e 261 Pfam PF00849 RNA pseudouridylate synthase 40 191 1.1E-29 T 17-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD13_15830 f24a9fa9bbd551d4989141d86171d17e 261 Gene3D G3DSA:3.30.2350.10 24 245 6.5E-54 T 17-10-2018 BJD13_15830 f24a9fa9bbd551d4989141d86171d17e 261 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 79 93 - T 17-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD13_15830 f24a9fa9bbd551d4989141d86171d17e 261 SUPERFAMILY SSF55120 26 258 1.3E-55 T 17-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD13_22435 1296781c3e1278a8cdc70c0db266e0e5 319 TIGRFAM TIGR01139 cysK: cysteine synthase A 8 303 2.7E-130 T 17-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 BJD13_22435 1296781c3e1278a8cdc70c0db266e0e5 319 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 292 2.0E-63 T 17-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme BJD13_22435 1296781c3e1278a8cdc70c0db266e0e5 319 Gene3D G3DSA:3.40.50.1100 37 155 1.2E-113 T 17-10-2018 BJD13_22435 1296781c3e1278a8cdc70c0db266e0e5 319 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 32 50 - T 17-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 BJD13_22435 1296781c3e1278a8cdc70c0db266e0e5 319 Gene3D G3DSA:3.40.50.1100 7 300 1.2E-113 T 17-10-2018 BJD13_22435 1296781c3e1278a8cdc70c0db266e0e5 319 SUPERFAMILY SSF53686 2 305 5.76E-92 T 17-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BJD13_22435 1296781c3e1278a8cdc70c0db266e0e5 319 TIGRFAM TIGR01136 cysKM: cysteine synthase 8 303 5.0E-124 T 17-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 BJD13_06635 6196e7b36ed1041b38355437545530bd 263 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 187 209 2.9E-21 T 17-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BJD13_06635 6196e7b36ed1041b38355437545530bd 263 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 209 228 2.9E-21 T 17-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BJD13_06635 6196e7b36ed1041b38355437545530bd 263 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 86 105 2.9E-21 T 17-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BJD13_06635 6196e7b36ed1041b38355437545530bd 263 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 27 48 2.9E-21 T 17-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BJD13_06635 6196e7b36ed1041b38355437545530bd 263 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 20 261 1.9E-58 T 17-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 BJD13_06635 6196e7b36ed1041b38355437545530bd 263 Pfam PF01311 Bacterial export proteins, family 1 20 253 5.3E-58 T 17-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BJD13_10725 bc1f436e8c43eafa2d82bf3046e17cc8 217 Gene3D G3DSA:3.40.50.300 61 174 1.3E-35 T 17-10-2018 BJD13_10725 bc1f436e8c43eafa2d82bf3046e17cc8 217 SUPERFAMILY SSF52540 62 175 7.86E-31 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_10725 bc1f436e8c43eafa2d82bf3046e17cc8 217 PIRSF PIRSF037290 17 216 1.7E-81 T 17-10-2018 IPR017166 Uncharacterised conserved protein UCP037290 BJD13_20615 9897d1eed28e7fa5f936402c4303a997 298 SUPERFAMILY SSF53850 89 295 1.61E-50 T 17-10-2018 BJD13_20615 9897d1eed28e7fa5f936402c4303a997 298 SUPERFAMILY SSF46785 4 84 2.83E-21 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_20615 9897d1eed28e7fa5f936402c4303a997 298 Gene3D G3DSA:3.40.190.10 163 264 1.3E-71 T 17-10-2018 BJD13_20615 9897d1eed28e7fa5f936402c4303a997 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 8.3E-18 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_20615 9897d1eed28e7fa5f936402c4303a997 298 Gene3D G3DSA:1.10.10.10 3 88 2.6E-27 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_20615 9897d1eed28e7fa5f936402c4303a997 298 Pfam PF03466 LysR substrate binding domain 89 290 7.0E-48 T 17-10-2018 IPR005119 LysR, substrate-binding BJD13_20615 9897d1eed28e7fa5f936402c4303a997 298 Gene3D G3DSA:3.40.190.10 92 290 1.3E-71 T 17-10-2018 BJD13_14910 580eb165dedfd41ea5a084b5e9e60231 317 Gene3D G3DSA:2.30.330.10 224 316 3.6E-21 T 17-10-2018 IPR036429 SpoA-like superfamily BJD13_14910 580eb165dedfd41ea5a084b5e9e60231 317 TIGRFAM TIGR02551 SpaO_YscQ: type III secretion apparatus protein, YscQ/HrcQ family 35 309 2.0E-51 T 17-10-2018 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO GO:0030254 BJD13_14910 580eb165dedfd41ea5a084b5e9e60231 317 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 240 309 7.8E-12 T 17-10-2018 IPR001543 Surface presentation of antigen (SpoA) BJD13_14910 580eb165dedfd41ea5a084b5e9e60231 317 SUPERFAMILY SSF101801 237 312 8.37E-13 T 17-10-2018 IPR036429 SpoA-like superfamily BJD13_08795 0bdbbb9a53ca622e6492d232d6e98033 481 SUPERFAMILY SSF52266 13 238 3.82E-39 T 17-10-2018 BJD13_08795 0bdbbb9a53ca622e6492d232d6e98033 481 Gene3D G3DSA:3.40.50.1110 14 242 5.6E-47 T 17-10-2018 IPR036514 SGNH hydrolase superfamily BJD13_08795 0bdbbb9a53ca622e6492d232d6e98033 481 Gene3D G3DSA:3.40.50.1110 258 478 7.4E-55 T 17-10-2018 IPR036514 SGNH hydrolase superfamily BJD13_08795 0bdbbb9a53ca622e6492d232d6e98033 481 SUPERFAMILY SSF52266 258 474 5.19E-49 T 17-10-2018 BJD13_08795 0bdbbb9a53ca622e6492d232d6e98033 481 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 291 467 2.9E-23 T 17-10-2018 IPR013830 SGNH hydrolase-type esterase domain BJD13_08795 0bdbbb9a53ca622e6492d232d6e98033 481 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 48 224 1.5E-19 T 17-10-2018 IPR013830 SGNH hydrolase-type esterase domain BJD13_11575 4ce351dfcd1872437135f668c1800977 378 Gene3D G3DSA:3.40.50.2000 192 350 7.3E-38 T 17-10-2018 BJD13_11575 4ce351dfcd1872437135f668c1800977 378 SUPERFAMILY SSF53756 2 363 3.14E-75 T 17-10-2018 BJD13_11575 4ce351dfcd1872437135f668c1800977 378 Pfam PF13439 Glycosyltransferase Family 4 14 177 1.7E-24 T 17-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 BJD13_11575 4ce351dfcd1872437135f668c1800977 378 Gene3D G3DSA:3.40.50.2000 1 191 2.2E-28 T 17-10-2018 BJD13_11575 4ce351dfcd1872437135f668c1800977 378 Pfam PF00534 Glycosyl transferases group 1 190 344 3.7E-26 T 17-10-2018 IPR001296 Glycosyl transferase, family 1 BJD13_04040 0fb275eeb1d12288e81c008a4ab0c276 475 Gene3D G3DSA:1.20.1250.20 270 464 1.6E-13 T 17-10-2018 BJD13_04040 0fb275eeb1d12288e81c008a4ab0c276 475 SUPERFAMILY SSF103473 12 462 6.93E-64 T 17-10-2018 IPR036259 MFS transporter superfamily BJD13_04040 0fb275eeb1d12288e81c008a4ab0c276 475 Pfam PF07690 Major Facilitator Superfamily 25 416 1.2E-53 T 17-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD13_04040 0fb275eeb1d12288e81c008a4ab0c276 475 Gene3D G3DSA:1.20.1720.10 21 245 2.1E-47 T 17-10-2018 BJD13_04040 0fb275eeb1d12288e81c008a4ab0c276 475 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 23 424 2.8E-69 T 17-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 BJD13_22030 1c0a93643c4cf6e4c0f2224bf55373b3 141 SUPERFAMILY SSF46626 2 129 2.62E-20 T 17-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BJD13_22030 1c0a93643c4cf6e4c0f2224bf55373b3 141 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 46 119 5.1E-12 T 17-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_22030 1c0a93643c4cf6e4c0f2224bf55373b3 141 Gene3D G3DSA:1.10.760.10 25 141 9.9E-20 T 17-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BJD13_17370 b07a3d50871bc2e6e3335ba665757667 368 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 6 84 7.5E-12 T 17-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family BJD13_17370 b07a3d50871bc2e6e3335ba665757667 368 Gene3D G3DSA:3.30.2310.20 3 91 7.7E-16 T 17-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily BJD13_06120 90c069ceef1fcaba76bf0121c7777cad 325 Pfam PF14824 Sirohaem biosynthesis protein central 119 145 1.0E-8 T 17-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 BJD13_06120 90c069ceef1fcaba76bf0121c7777cad 325 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 221 296 1.3E-10 T 17-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 BJD13_06120 90c069ceef1fcaba76bf0121c7777cad 325 Gene3D G3DSA:3.30.160.110 113 147 1.8E-16 T 17-10-2018 BJD13_06120 90c069ceef1fcaba76bf0121c7777cad 325 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 207 1.4E-66 T 17-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 BJD13_06120 90c069ceef1fcaba76bf0121c7777cad 325 Gene3D G3DSA:3.40.50.720 1 111 1.0E-28 T 17-10-2018 BJD13_06120 90c069ceef1fcaba76bf0121c7777cad 325 Pfam PF13241 Putative NAD(P)-binding 6 115 4.0E-25 T 17-10-2018 BJD13_06120 90c069ceef1fcaba76bf0121c7777cad 325 SUPERFAMILY SSF75615 114 206 1.96E-25 T 17-10-2018 BJD13_06120 90c069ceef1fcaba76bf0121c7777cad 325 SUPERFAMILY SSF53790 216 321 2.18E-14 T 17-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 BJD13_06120 90c069ceef1fcaba76bf0121c7777cad 325 SUPERFAMILY SSF51735 1 111 8.14E-22 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_06120 90c069ceef1fcaba76bf0121c7777cad 325 Gene3D G3DSA:3.40.1010.10 206 322 4.9E-14 T 17-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 BJD13_06120 90c069ceef1fcaba76bf0121c7777cad 325 Pfam PF10414 Sirohaem synthase dimerisation region 150 207 2.8E-15 T 17-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 BJD13_15725 1e9d1af8f61e379e11aed18fa00e0a59 536 SUPERFAMILY SSF52096 277 536 2.49E-87 T 17-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BJD13_15725 1e9d1af8f61e379e11aed18fa00e0a59 536 Pfam PF01039 Carboxyl transferase domain 48 526 1.8E-149 T 17-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 BJD13_15725 1e9d1af8f61e379e11aed18fa00e0a59 536 Gene3D G3DSA:3.90.226.10 1 272 3.3E-98 T 17-10-2018 BJD13_15725 1e9d1af8f61e379e11aed18fa00e0a59 536 Gene3D G3DSA:3.90.226.10 276 536 2.3E-103 T 17-10-2018 BJD13_15725 1e9d1af8f61e379e11aed18fa00e0a59 536 SUPERFAMILY SSF52096 23 270 3.17E-72 T 17-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BJD13_06060 a741ec114904e03305cdb5e8639a23bb 232 Gene3D G3DSA:2.60.120.200 42 232 3.6E-59 T 17-10-2018 BJD13_06060 a741ec114904e03305cdb5e8639a23bb 232 SUPERFAMILY SSF49899 47 220 4.35E-29 T 17-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily BJD13_06060 a741ec114904e03305cdb5e8639a23bb 232 PIRSF PIRSF022704 35 232 5.0E-71 T 17-10-2018 IPR015987 Uncharacterised conserved protein UCP022704 BJD13_06060 a741ec114904e03305cdb5e8639a23bb 232 Pfam PF07081 Protein of unknown function (DUF1349) 48 221 2.2E-62 T 17-10-2018 IPR009784 Protein of unknown function DUF1349 BJD13_02605 59bff3a8e8c0a191d1c82580f335f5e9 489 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 18 480 7.9E-73 T 17-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 BJD13_02605 59bff3a8e8c0a191d1c82580f335f5e9 489 Gene3D G3DSA:1.20.1600.10 77 479 1.3E-88 T 17-10-2018 BJD13_02605 59bff3a8e8c0a191d1c82580f335f5e9 489 SUPERFAMILY SSF56954 6 480 3.14E-77 T 17-10-2018 BJD13_02605 59bff3a8e8c0a191d1c82580f335f5e9 489 Pfam PF02321 Outer membrane efflux protein 303 478 8.4E-23 T 17-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 BJD13_02605 59bff3a8e8c0a191d1c82580f335f5e9 489 Pfam PF02321 Outer membrane efflux protein 86 272 1.5E-14 T 17-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 BJD13_02605 59bff3a8e8c0a191d1c82580f335f5e9 489 Gene3D G3DSA:2.20.200.10 121 372 1.3E-88 T 17-10-2018 BJD13_21115 aa0fcf754b822cdfd4e8e7feedad6040 296 SUPERFAMILY SSF103088 215 280 5.62E-7 T 17-10-2018 IPR036737 OmpA-like domain superfamily BJD13_00445 d77ce947de483dce25df412971ba3ee3 352 Pfam PF07728 AAA domain (dynein-related subfamily) 98 214 3.4E-13 T 17-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 BJD13_00445 d77ce947de483dce25df412971ba3ee3 352 Gene3D G3DSA:3.40.50.300 88 254 1.4E-18 T 17-10-2018 BJD13_00445 d77ce947de483dce25df412971ba3ee3 352 SUPERFAMILY SSF52540 82 261 9.46E-19 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_04830 162ca4926f8634b931510412ba610fa9 99 Pfam PF03795 YCII-related domain 2 95 2.5E-24 T 17-10-2018 IPR005545 YCII-related BJD13_04830 162ca4926f8634b931510412ba610fa9 99 Gene3D G3DSA:3.30.70.1060 1 98 1.2E-33 T 17-10-2018 BJD13_04830 162ca4926f8634b931510412ba610fa9 99 SUPERFAMILY SSF54909 2 97 4.11E-29 T 17-10-2018 IPR011008 Dimeric alpha-beta barrel BJD13_11440 5a5318620f412737d175579d775ea9f2 218 PIRSF PIRSF028445 1 218 2.0E-131 T 17-10-2018 IPR016885 Uncharacterised conserved protein UCP028445 BJD13_11440 5a5318620f412737d175579d775ea9f2 218 Gene3D G3DSA:3.40.50.150 19 177 1.9E-9 T 17-10-2018 BJD13_11440 5a5318620f412737d175579d775ea9f2 218 SUPERFAMILY SSF53335 76 175 1.53E-13 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_23790 96ac447daad7084e49d39a96785c9982 370 Gene3D G3DSA:1.20.1090.10 180 369 1.5E-61 T 17-10-2018 BJD13_23790 96ac447daad7084e49d39a96785c9982 370 Pfam PF01761 3-dehydroquinate synthase 74 337 1.2E-102 T 17-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 BJD13_23790 96ac447daad7084e49d39a96785c9982 370 Gene3D G3DSA:3.40.50.1970 3 179 4.1E-58 T 17-10-2018 BJD13_23790 96ac447daad7084e49d39a96785c9982 370 PIRSF PIRSF001455 25 369 2.1E-102 T 17-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 BJD13_23790 96ac447daad7084e49d39a96785c9982 370 SUPERFAMILY SSF56796 15 368 1.31E-102 T 17-10-2018 BJD13_23790 96ac447daad7084e49d39a96785c9982 370 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 7 368 69.768 T 17-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 BJD13_23790 96ac447daad7084e49d39a96785c9982 370 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 18 366 4.6E-108 T 17-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 BJD13_13775 a1e5f5e8da9ab1aca920763ec87cbc7d 477 Pfam PF08887 GAD-like domain 17 97 5.1E-12 T 17-10-2018 IPR014983 GAD-related BJD13_03470 79a5fded99605e73fc9916d31fa29d0f 924 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 50 924 2.8E-224 T 17-10-2018 IPR010104 Bacterial TonB-dependent receptor BJD13_03470 79a5fded99605e73fc9916d31fa29d0f 924 Pfam PF07715 TonB-dependent Receptor Plug Domain 69 172 3.3E-14 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_03470 79a5fded99605e73fc9916d31fa29d0f 924 Gene3D G3DSA:2.170.130.10 52 176 6.0E-16 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_03470 79a5fded99605e73fc9916d31fa29d0f 924 SUPERFAMILY SSF56935 44 924 2.62E-74 T 17-10-2018 BJD13_03470 79a5fded99605e73fc9916d31fa29d0f 924 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 907 924 - T 17-10-2018 IPR010917 TonB-dependent receptor, conserved site BJD13_02120 945b518e2e2a7c675e3b813a3e5f6b6e 332 SUPERFAMILY SSF48576 15 331 6.91E-99 T 17-10-2018 IPR008949 Isoprenoid synthase domain superfamily BJD13_02120 945b518e2e2a7c675e3b813a3e5f6b6e 332 Pfam PF00348 Polyprenyl synthetase 41 273 3.4E-76 T 17-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 BJD13_02120 945b518e2e2a7c675e3b813a3e5f6b6e 332 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 213 225 - T 17-10-2018 IPR033749 Polyprenyl synthetase, conserved site BJD13_02120 945b518e2e2a7c675e3b813a3e5f6b6e 332 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 91 105 - T 17-10-2018 IPR033749 Polyprenyl synthetase, conserved site BJD13_02120 945b518e2e2a7c675e3b813a3e5f6b6e 332 Gene3D G3DSA:1.10.600.10 6 332 3.7E-109 T 17-10-2018 IPR008949 Isoprenoid synthase domain superfamily BJD13_08950 5b4f6a14f2c956028486daad16dc7a4a 310 Gene3D G3DSA:3.40.630.30 5 131 2.7E-16 T 17-10-2018 BJD13_08950 5b4f6a14f2c956028486daad16dc7a4a 310 Pfam PF13673 Acetyltransferase (GNAT) domain 50 125 3.1E-9 T 17-10-2018 IPR000182 GNAT domain BJD13_08950 5b4f6a14f2c956028486daad16dc7a4a 310 SUPERFAMILY SSF55729 20 144 7.2E-21 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD13_18340 c65aa3d4336055ef30492a2988521204 920 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 13 907 0.0 T 17-10-2018 IPR017729 Type VI secretion system, ATPase ClpV1 BJD13_18340 c65aa3d4336055ef30492a2988521204 920 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 687 705 - T 17-10-2018 IPR028299 ClpA/B, conserved site 2 BJD13_18340 c65aa3d4336055ef30492a2988521204 920 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 825 896 1.1E-12 T 17-10-2018 IPR019489 Clp ATPase, C-terminal BJD13_18340 c65aa3d4336055ef30492a2988521204 920 SMART SM00382 653 795 8.2E-9 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_18340 c65aa3d4336055ef30492a2988521204 920 SMART SM00382 231 376 3.7E-8 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_18340 c65aa3d4336055ef30492a2988521204 920 SUPERFAMILY SSF81923 12 131 1.9E-16 T 17-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 BJD13_18340 c65aa3d4336055ef30492a2988521204 920 Gene3D G3DSA:1.10.8.60 825 911 4.8E-10 T 17-10-2018 BJD13_18340 c65aa3d4336055ef30492a2988521204 920 Gene3D G3DSA:3.40.50.300 606 823 1.9E-66 T 17-10-2018 BJD13_18340 c65aa3d4336055ef30492a2988521204 920 Gene3D G3DSA:1.10.1780.10 1 161 1.7E-41 T 17-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 BJD13_18340 c65aa3d4336055ef30492a2988521204 920 Pfam PF07724 AAA domain (Cdc48 subfamily) 652 818 2.1E-39 T 17-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BJD13_18340 c65aa3d4336055ef30492a2988521204 920 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 327 339 - T 17-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 BJD13_18340 c65aa3d4336055ef30492a2988521204 920 Gene3D G3DSA:3.40.50.300 186 375 2.6E-64 T 17-10-2018 BJD13_18340 c65aa3d4336055ef30492a2988521204 920 SMART SM01086 825 915 6.2E-10 T 17-10-2018 IPR019489 Clp ATPase, C-terminal BJD13_18340 c65aa3d4336055ef30492a2988521204 920 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 657 675 3.7E-31 T 17-10-2018 IPR001270 ClpA/B family GO:0005524 BJD13_18340 c65aa3d4336055ef30492a2988521204 920 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 702 720 3.7E-31 T 17-10-2018 IPR001270 ClpA/B family GO:0005524 BJD13_18340 c65aa3d4336055ef30492a2988521204 920 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 764 778 3.7E-31 T 17-10-2018 IPR001270 ClpA/B family GO:0005524 BJD13_18340 c65aa3d4336055ef30492a2988521204 920 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 731 749 3.7E-31 T 17-10-2018 IPR001270 ClpA/B family GO:0005524 BJD13_18340 c65aa3d4336055ef30492a2988521204 920 SUPERFAMILY SSF52540 602 892 5.34E-64 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_18340 c65aa3d4336055ef30492a2988521204 920 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 236 347 1.8E-8 T 17-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BJD13_18340 c65aa3d4336055ef30492a2988521204 920 SUPERFAMILY SSF52540 192 522 5.19E-72 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_18340 c65aa3d4336055ef30492a2988521204 920 Gene3D G3DSA:3.40.50.300 377 600 4.0E-41 T 17-10-2018 BJD13_14410 33867e51bc6739a5d49a4fc893ebe1d8 156 PRINTS PR00601 Bacterioferritin signature 3 22 6.8E-69 T 17-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BJD13_14410 33867e51bc6739a5d49a4fc893ebe1d8 156 PRINTS PR00601 Bacterioferritin signature 128 149 6.8E-69 T 17-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BJD13_14410 33867e51bc6739a5d49a4fc893ebe1d8 156 PRINTS PR00601 Bacterioferritin signature 44 64 6.8E-69 T 17-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BJD13_14410 33867e51bc6739a5d49a4fc893ebe1d8 156 PRINTS PR00601 Bacterioferritin signature 86 106 6.8E-69 T 17-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BJD13_14410 33867e51bc6739a5d49a4fc893ebe1d8 156 PRINTS PR00601 Bacterioferritin signature 107 127 6.8E-69 T 17-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BJD13_14410 33867e51bc6739a5d49a4fc893ebe1d8 156 PRINTS PR00601 Bacterioferritin signature 23 43 6.8E-69 T 17-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BJD13_14410 33867e51bc6739a5d49a4fc893ebe1d8 156 PRINTS PR00601 Bacterioferritin signature 65 85 6.8E-69 T 17-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BJD13_14410 33867e51bc6739a5d49a4fc893ebe1d8 156 PIRSF PIRSF002560 1 156 5.1E-71 T 17-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BJD13_14410 33867e51bc6739a5d49a4fc893ebe1d8 156 TIGRFAM TIGR00754 bfr: bacterioferritin 1 154 2.0E-73 T 17-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BJD13_14410 33867e51bc6739a5d49a4fc893ebe1d8 156 Pfam PF00210 Ferritin-like domain 8 143 1.9E-39 T 17-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 BJD13_14410 33867e51bc6739a5d49a4fc893ebe1d8 156 SUPERFAMILY SSF47240 1 152 1.77E-54 T 17-10-2018 IPR009078 Ferritin-like superfamily BJD13_14410 33867e51bc6739a5d49a4fc893ebe1d8 156 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 17-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BJD13_14410 33867e51bc6739a5d49a4fc893ebe1d8 156 Gene3D G3DSA:1.20.1260.10 1 156 5.9E-69 T 17-10-2018 IPR012347 Ferritin-like BJD13_11535 5f5b467624c4c19c4eed98f2b8b626cb 335 SUPERFAMILY SSF53659 1 335 1.17E-123 T 17-10-2018 BJD13_11535 5f5b467624c4c19c4eed98f2b8b626cb 335 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 227 246 - T 17-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 BJD13_11535 5f5b467624c4c19c4eed98f2b8b626cb 335 Gene3D G3DSA:3.40.718.10 1 335 1.5E-139 T 17-10-2018 BJD13_11535 5f5b467624c4c19c4eed98f2b8b626cb 335 SMART SM01329 4 331 3.7E-179 T 17-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 BJD13_11535 5f5b467624c4c19c4eed98f2b8b626cb 335 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 4 326 4.8E-105 T 17-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 BJD13_08460 da068db97e78a819cbe78b9bd78196a1 374 SUPERFAMILY SSF53383 47 372 1.33E-56 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD13_08460 da068db97e78a819cbe78b9bd78196a1 374 Gene3D G3DSA:3.90.1150.10 48 361 8.3E-76 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD13_08460 da068db97e78a819cbe78b9bd78196a1 374 Gene3D G3DSA:3.40.640.10 64 279 8.3E-76 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD13_08460 da068db97e78a819cbe78b9bd78196a1 374 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 235 248 - T 17-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 BJD13_08460 da068db97e78a819cbe78b9bd78196a1 374 Pfam PF00155 Aminotransferase class I and II 69 368 2.0E-34 T 17-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BJD13_17450 48543420231aa37c2251d0122d171c7f 489 Pfam PF11855 Protein of unknown function (DUF3375) 11 480 2.2E-151 T 17-10-2018 IPR021804 Protein of unknown function DUF3375 BJD13_14335 c921bfd851f42d1e45b3595d41033a48 396 SUPERFAMILY SSF103473 7 390 1.83E-47 T 17-10-2018 IPR036259 MFS transporter superfamily BJD13_14335 c921bfd851f42d1e45b3595d41033a48 396 Pfam PF07690 Major Facilitator Superfamily 22 319 3.5E-27 T 17-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD13_14335 c921bfd851f42d1e45b3595d41033a48 396 Gene3D G3DSA:1.20.1250.20 9 386 4.7E-43 T 17-10-2018 BJD13_04800 6c165d3193e7809d2362a3517272e7b3 266 SUPERFAMILY SSF56317 1 260 7.59E-59 T 17-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily BJD13_04800 6c165d3193e7809d2362a3517272e7b3 266 Pfam PF00795 Carbon-nitrogen hydrolase 6 245 2.9E-29 T 17-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 BJD13_04800 6c165d3193e7809d2362a3517272e7b3 266 Gene3D G3DSA:3.60.110.10 1 266 1.4E-100 T 17-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily BJD13_11455 06769be4c95cd76a536456c8e2b64a0a 656 Gene3D G3DSA:3.10.50.40 281 412 2.4E-35 T 17-10-2018 BJD13_11455 06769be4c95cd76a536456c8e2b64a0a 656 SUPERFAMILY SSF109998 68 258 3.92E-20 T 17-10-2018 IPR027304 Trigger factor/SurA domain superfamily BJD13_11455 06769be4c95cd76a536456c8e2b64a0a 656 Pfam PF13145 PPIC-type PPIASE domain 397 512 6.5E-8 T 17-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 BJD13_11455 06769be4c95cd76a536456c8e2b64a0a 656 Gene3D G3DSA:1.10.4030.30 67 216 1.2E-8 T 17-10-2018 BJD13_11455 06769be4c95cd76a536456c8e2b64a0a 656 SUPERFAMILY SSF54534 283 389 6.34E-32 T 17-10-2018 BJD13_11455 06769be4c95cd76a536456c8e2b64a0a 656 Pfam PF13623 SurA N-terminal domain 2 159 2.1E-26 T 17-10-2018 BJD13_11455 06769be4c95cd76a536456c8e2b64a0a 656 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 326 347 - T 17-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 BJD13_11455 06769be4c95cd76a536456c8e2b64a0a 656 Pfam PF13616 PPIC-type PPIASE domain 281 388 8.8E-30 T 17-10-2018 BJD13_03245 011f885c737346172683f8bd23d3007f 295 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 30 117 5.2E-21 T 17-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 BJD13_03245 011f885c737346172683f8bd23d3007f 295 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 120 288 1.3E-52 T 17-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 BJD13_03245 011f885c737346172683f8bd23d3007f 295 Gene3D G3DSA:3.20.20.70 128 279 3.8E-98 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD13_03245 011f885c737346172683f8bd23d3007f 295 PIRSF PIRSF006250 14 291 6.4E-83 T 17-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 BJD13_03245 011f885c737346172683f8bd23d3007f 295 Gene3D G3DSA:3.90.1170.20 17 288 3.8E-98 T 17-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 BJD13_03245 011f885c737346172683f8bd23d3007f 295 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 22 288 2.5E-82 T 17-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 BJD13_03245 011f885c737346172683f8bd23d3007f 295 SUPERFAMILY SSF54675 13 117 2.51E-27 T 17-10-2018 BJD13_03245 011f885c737346172683f8bd23d3007f 295 SUPERFAMILY SSF51690 120 289 7.46E-53 T 17-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 BJD13_15660 6363db7898a7fb5b23e1a5fd3d5f98d6 125 Pfam PF03203 MerC mercury resistance protein 9 118 4.7E-22 T 17-10-2018 IPR004891 Mercury transport protein MerC GO:0015097|GO:0015694|GO:0016020 BJD13_23575 446b80f757a4ce4fb638a219ae9246d4 182 Pfam PF00293 NUDIX domain 44 156 1.0E-15 T 17-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 BJD13_23575 446b80f757a4ce4fb638a219ae9246d4 182 SUPERFAMILY SSF55811 7 178 1.49E-36 T 17-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BJD13_23575 446b80f757a4ce4fb638a219ae9246d4 182 ProSitePatterns PS00893 Nudix box signature. 78 99 - T 17-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 BJD13_23575 446b80f757a4ce4fb638a219ae9246d4 182 Gene3D G3DSA:3.90.79.10 16 181 5.5E-43 T 17-10-2018 BJD13_22325 66f719d69ab020060cd13c08fa84cf96 652 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 366 530 2.1E-37 T 17-10-2018 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain BJD13_22325 66f719d69ab020060cd13c08fa84cf96 652 SUPERFAMILY SSF100950 224 543 1.26E-39 T 17-10-2018 IPR037171 NagB/RpiA transferase-like BJD13_22325 66f719d69ab020060cd13c08fa84cf96 652 Gene3D G3DSA:3.40.1080.20 400 534 1.7E-27 T 17-10-2018 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily BJD13_22325 66f719d69ab020060cd13c08fa84cf96 652 Gene3D G3DSA:3.30.750.70 224 279 1.9E-5 T 17-10-2018 BJD13_16615 d81b3bf00c276b89dcb9f8518b6ae95a 176 Gene3D G3DSA:3.30.530.20 31 174 1.4E-34 T 17-10-2018 IPR023393 START-like domain superfamily BJD13_16615 d81b3bf00c276b89dcb9f8518b6ae95a 176 SUPERFAMILY SSF55961 30 172 3.06E-39 T 17-10-2018 BJD13_16615 d81b3bf00c276b89dcb9f8518b6ae95a 176 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 42 171 5.2E-23 T 17-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like BJD13_01850 b2cc851038bf90bd2e2661072e5ca4f5 370 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 38 273 3.1E-61 T 17-10-2018 IPR018642 Protein of unknown function DUF2066 BJD13_02860 ce5c6120f1576cd20af0608c340d71bf 159 Gene3D G3DSA:3.10.50.40 3 153 2.3E-50 T 17-10-2018 BJD13_02860 ce5c6120f1576cd20af0608c340d71bf 159 SUPERFAMILY SSF54534 2 139 2.95E-34 T 17-10-2018 BJD13_02860 ce5c6120f1576cd20af0608c340d71bf 159 Gene3D G3DSA:2.40.10.330 71 120 2.3E-50 T 17-10-2018 BJD13_02860 ce5c6120f1576cd20af0608c340d71bf 159 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 3 135 8.9E-11 T 17-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain BJD13_11895 cc8c9252f5e813862f604d3bdf08833c 113 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 7 109 1.6E-45 T 17-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_11895 cc8c9252f5e813862f604d3bdf08833c 113 SUPERFAMILY SSF54843 2 110 1.26E-41 T 17-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 BJD13_11895 cc8c9252f5e813862f604d3bdf08833c 113 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 3 112 28.371 T 17-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_11895 cc8c9252f5e813862f604d3bdf08833c 113 ProSitePatterns PS00464 Ribosomal protein L22 signature. 85 109 - T 17-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_11895 cc8c9252f5e813862f604d3bdf08833c 113 Pfam PF00237 Ribosomal protein L22p/L17e 8 109 1.3E-35 T 17-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 BJD13_11895 cc8c9252f5e813862f604d3bdf08833c 113 Gene3D G3DSA:3.90.470.10 3 113 5.2E-45 T 17-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 BJD13_13430 3f2fb24cf93903aff35c827fa92a8752 310 Pfam PF00294 pfkB family carbohydrate kinase 36 290 3.1E-36 T 17-10-2018 IPR011611 Carbohydrate kinase PfkB BJD13_13430 3f2fb24cf93903aff35c827fa92a8752 310 Gene3D G3DSA:3.40.1190.20 1 310 8.0E-107 T 17-10-2018 IPR029056 Ribokinase-like BJD13_13430 3f2fb24cf93903aff35c827fa92a8752 310 SUPERFAMILY SSF53613 2 296 1.06E-62 T 17-10-2018 IPR029056 Ribokinase-like BJD13_13430 3f2fb24cf93903aff35c827fa92a8752 310 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 47 71 - T 17-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 BJD13_19845 2719e1c8555c874061c16a1723fb71c9 200 Pfam PF11304 Protein of unknown function (DUF3106) 43 116 1.3E-10 T 17-10-2018 IPR021455 Protein of unknown function DUF3106 BJD13_03510 d22793725823dd3d3d0d0e0990971f9c 175 Gene3D G3DSA:3.10.20.80 6 79 2.5E-33 T 17-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 BJD13_03510 d22793725823dd3d3d0d0e0990971f9c 175 SUPERFAMILY SSF55200 87 174 5.36E-31 T 17-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 BJD13_03510 d22793725823dd3d3d0d0e0990971f9c 175 Gene3D G3DSA:3.30.110.10 80 175 5.0E-37 T 17-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 BJD13_03510 d22793725823dd3d3d0d0e0990971f9c 175 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 12 174 1.8E-63 T 17-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 BJD13_03510 d22793725823dd3d3d0d0e0990971f9c 175 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 87 172 3.3E-36 T 17-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 BJD13_03510 d22793725823dd3d3d0d0e0990971f9c 175 SUPERFAMILY SSF54364 10 82 2.62E-29 T 17-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 BJD13_03510 d22793725823dd3d3d0d0e0990971f9c 175 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 12 80 3.8E-30 T 17-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 BJD13_03510 d22793725823dd3d3d0d0e0990971f9c 175 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 5 174 31.163 T 17-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 BJD13_03510 d22793725823dd3d3d0d0e0990971f9c 175 ProSitePatterns PS00938 Initiation factor 3 signature. 62 75 - T 17-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 BJD13_19320 c60574d38d7d00e12443d271d26b8ac5 272 SUPERFAMILY SSF56925 121 247 5.76E-6 T 17-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel BJD13_16790 c1f5ec4c6f49495f8da460b69ce17d19 799 Gene3D G3DSA:1.10.1400.10 553 681 2.7E-150 T 17-10-2018 BJD13_16790 c1f5ec4c6f49495f8da460b69ce17d19 799 Gene3D G3DSA:1.10.439.10 12 175 3.8E-46 T 17-10-2018 IPR023343 Penicillin amidase type, domain 1 GO:0016811 BJD13_16790 c1f5ec4c6f49495f8da460b69ce17d19 799 SUPERFAMILY SSF56235 36 795 1.23E-194 T 17-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BJD13_16790 c1f5ec4c6f49495f8da460b69ce17d19 799 PIRSF PIRSF001227 3 796 1.0E-209 T 17-10-2018 IPR014395 Penicillin/GL-7-ACA/AHL acylase GO:0016811 BJD13_16790 c1f5ec4c6f49495f8da460b69ce17d19 799 Gene3D G3DSA:2.30.120.10 333 401 2.7E-150 T 17-10-2018 BJD13_16790 c1f5ec4c6f49495f8da460b69ce17d19 799 Gene3D G3DSA:3.60.20.10 261 771 2.7E-150 T 17-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BJD13_16790 c1f5ec4c6f49495f8da460b69ce17d19 799 Pfam PF01804 Penicillin amidase 40 784 1.1E-194 T 17-10-2018 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase GO:0016787|GO:0017000 BJD13_04265 9ac0e60936c8fa04f19d7d524669997e 146 SUPERFAMILY SSF101738 6 119 4.05E-45 T 17-10-2018 IPR036760 SspB-like superfamily BJD13_04265 9ac0e60936c8fa04f19d7d524669997e 146 Gene3D G3DSA:2.30.30.220 6 126 8.3E-44 T 17-10-2018 IPR036760 SspB-like superfamily BJD13_04265 9ac0e60936c8fa04f19d7d524669997e 146 Pfam PF04386 Stringent starvation protein B 11 146 1.5E-33 T 17-10-2018 IPR007481 Stringent starvation protein B BJD13_04265 9ac0e60936c8fa04f19d7d524669997e 146 PIRSF PIRSF005276 5 146 5.2E-54 T 17-10-2018 IPR007481 Stringent starvation protein B BJD13_14380 032d20245ca47f9b6e2cdfa3073de055 128 Gene3D G3DSA:2.60.300.12 23 128 1.5E-34 T 17-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 BJD13_14380 032d20245ca47f9b6e2cdfa3073de055 128 Pfam PF01521 Iron-sulphur cluster biosynthesis 23 123 4.5E-19 T 17-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 BJD13_14380 032d20245ca47f9b6e2cdfa3073de055 128 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 109 126 - T 17-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 BJD13_14380 032d20245ca47f9b6e2cdfa3073de055 128 SUPERFAMILY SSF89360 23 117 1.9E-29 T 17-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 BJD13_14380 032d20245ca47f9b6e2cdfa3073de055 128 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 25 128 1.4E-37 T 17-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 BJD13_14380 032d20245ca47f9b6e2cdfa3073de055 128 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 128 35.569 T 17-10-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 BJD13_05365 aa71522fcb4fa1680e1f39647aa7bff4 848 Pfam PF00753 Metallo-beta-lactamase superfamily 545 732 4.7E-13 T 17-10-2018 IPR001279 Metallo-beta-lactamase BJD13_05365 aa71522fcb4fa1680e1f39647aa7bff4 848 Pfam PF13567 Domain of unknown function (DUF4131) 39 206 3.8E-24 T 17-10-2018 IPR025405 Domain of unknown function DUF4131 BJD13_05365 aa71522fcb4fa1680e1f39647aa7bff4 848 Gene3D G3DSA:3.60.15.10 536 772 1.9E-48 T 17-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BJD13_05365 aa71522fcb4fa1680e1f39647aa7bff4 848 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 161 762 3.0E-100 T 17-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 BJD13_05365 aa71522fcb4fa1680e1f39647aa7bff4 848 Pfam PF03772 Competence protein 244 512 3.1E-58 T 17-10-2018 IPR004477 ComEC/Rec2-related protein BJD13_05365 aa71522fcb4fa1680e1f39647aa7bff4 848 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 266 442 4.0E-26 T 17-10-2018 IPR004477 ComEC/Rec2-related protein BJD13_05365 aa71522fcb4fa1680e1f39647aa7bff4 848 SUPERFAMILY SSF56281 538 768 9.17E-44 T 17-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BJD13_05365 aa71522fcb4fa1680e1f39647aa7bff4 848 SMART SM00849 548 733 3.9E-13 T 17-10-2018 IPR001279 Metallo-beta-lactamase BJD13_06630 f7aa6a322436b7197f4bfbc9afd13cf4 89 PIRSF PIRSF004669 1 89 5.4E-23 T 17-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BJD13_06630 f7aa6a322436b7197f4bfbc9afd13cf4 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 8.0E-15 T 17-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BJD13_06630 f7aa6a322436b7197f4bfbc9afd13cf4 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 8.0E-15 T 17-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BJD13_06630 f7aa6a322436b7197f4bfbc9afd13cf4 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 8.0E-15 T 17-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BJD13_06630 f7aa6a322436b7197f4bfbc9afd13cf4 89 Pfam PF01313 Bacterial export proteins, family 3 10 77 4.4E-20 T 17-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BJD13_06590 0db47f056cb5c953c498661544172123 151 Pfam PF02050 Flagellar FliJ protein 19 137 4.4E-23 T 17-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 BJD13_06590 0db47f056cb5c953c498661544172123 151 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 5 138 4.8E-28 T 17-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 BJD13_13290 f084ec45991705d914b44d9b06e1f7b2 351 Gene3D G3DSA:3.30.360.10 127 330 1.1E-126 T 17-10-2018 BJD13_13290 f084ec45991705d914b44d9b06e1f7b2 351 SUPERFAMILY SSF51735 4 157 8.92E-50 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_13290 f084ec45991705d914b44d9b06e1f7b2 351 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 120 1.3E-25 T 17-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 BJD13_13290 f084ec45991705d914b44d9b06e1f7b2 351 SUPERFAMILY SSF55347 130 284 4.74E-27 T 17-10-2018 BJD13_13290 f084ec45991705d914b44d9b06e1f7b2 351 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 134 238 1.4E-16 T 17-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 BJD13_13290 f084ec45991705d914b44d9b06e1f7b2 351 Gene3D G3DSA:3.40.50.720 6 317 1.1E-126 T 17-10-2018 BJD13_16815 f8c069a459d67f72f6761bff59dd9306 493 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 29 135 1.3E-36 T 17-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 BJD13_16815 f8c069a459d67f72f6761bff59dd9306 493 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 149 470 6.1E-29 T 17-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BJD13_16815 f8c069a459d67f72f6761bff59dd9306 493 PRINTS PR00419 Adrenodoxin reductase family signature 172 185 7.5E-29 T 17-10-2018 BJD13_16815 f8c069a459d67f72f6761bff59dd9306 493 PRINTS PR00419 Adrenodoxin reductase family signature 333 346 7.5E-29 T 17-10-2018 BJD13_16815 f8c069a459d67f72f6761bff59dd9306 493 PRINTS PR00419 Adrenodoxin reductase family signature 149 171 7.5E-29 T 17-10-2018 BJD13_16815 f8c069a459d67f72f6761bff59dd9306 493 PRINTS PR00419 Adrenodoxin reductase family signature 299 313 7.5E-29 T 17-10-2018 BJD13_16815 f8c069a459d67f72f6761bff59dd9306 493 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 7 483 2.4E-242 T 17-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 BJD13_16815 f8c069a459d67f72f6761bff59dd9306 493 Gene3D G3DSA:3.50.50.60 292 409 5.0E-26 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_16815 f8c069a459d67f72f6761bff59dd9306 493 Gene3D G3DSA:1.10.1060.10 28 145 2.4E-33 T 17-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 BJD13_16815 f8c069a459d67f72f6761bff59dd9306 493 Gene3D G3DSA:3.50.50.60 146 272 2.3E-29 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_16815 f8c069a459d67f72f6761bff59dd9306 493 SUPERFAMILY SSF46548 7 158 6.8E-37 T 17-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 BJD13_16815 f8c069a459d67f72f6761bff59dd9306 493 Gene3D G3DSA:3.50.50.60 410 476 5.0E-26 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_16815 f8c069a459d67f72f6761bff59dd9306 493 SUPERFAMILY SSF51971 146 410 8.24E-67 T 17-10-2018 BJD13_15555 fdfcf3ea9ca2f172eb8650542444c7f9 473 Gene3D G3DSA:3.50.50.60 25 314 5.2E-35 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_15555 fdfcf3ea9ca2f172eb8650542444c7f9 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 218 236 1.5E-5 T 17-10-2018 BJD13_15555 fdfcf3ea9ca2f172eb8650542444c7f9 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 38 57 1.5E-5 T 17-10-2018 BJD13_15555 fdfcf3ea9ca2f172eb8650542444c7f9 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 172 190 1.5E-5 T 17-10-2018 BJD13_15555 fdfcf3ea9ca2f172eb8650542444c7f9 473 SUPERFAMILY SSF51905 36 388 1.64E-27 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_15555 fdfcf3ea9ca2f172eb8650542444c7f9 473 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 39 252 2.6E-13 T 17-10-2018 BJD13_15160 44adc72d2d12b3004abd91588d729392 170 Gene3D G3DSA:3.10.450.50 39 167 4.2E-27 T 17-10-2018 BJD13_15160 44adc72d2d12b3004abd91588d729392 170 SUPERFAMILY SSF54427 44 157 1.0E-20 T 17-10-2018 IPR032710 NTF2-like domain superfamily BJD13_15160 44adc72d2d12b3004abd91588d729392 170 Pfam PF12680 SnoaL-like domain 53 155 1.7E-10 T 17-10-2018 IPR037401 SnoaL-like domain BJD13_14345 946a3dff0375ef29d3220821e9f11c10 640 Pfam PF01553 Acyltransferase 462 582 6.3E-25 T 17-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 BJD13_14345 946a3dff0375ef29d3220821e9f11c10 640 Pfam PF07690 Major Facilitator Superfamily 24 386 6.3E-18 T 17-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD13_14345 946a3dff0375ef29d3220821e9f11c10 640 SUPERFAMILY SSF103473 11 438 9.59E-26 T 17-10-2018 IPR036259 MFS transporter superfamily BJD13_14345 946a3dff0375ef29d3220821e9f11c10 640 SUPERFAMILY SSF69593 427 586 2.22E-28 T 17-10-2018 BJD13_14345 946a3dff0375ef29d3220821e9f11c10 640 SMART SM00563 469 585 8.9E-29 T 17-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 BJD13_14345 946a3dff0375ef29d3220821e9f11c10 640 Gene3D G3DSA:1.20.1250.20 8 433 3.1E-24 T 17-10-2018 BJD13_19545 c8125d3c1faf955e4e88e66ba2a4e507 191 SUPERFAMILY SSF52833 73 189 1.76E-7 T 17-10-2018 IPR036249 Thioredoxin-like superfamily BJD13_02820 62a21078995216c7728ba01580a2c2a3 434 SUPERFAMILY SSF52402 13 223 2.65E-59 T 17-10-2018 BJD13_02820 62a21078995216c7728ba01580a2c2a3 434 Pfam PF11734 TilS substrate C-terminal domain 356 427 1.6E-17 T 17-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 BJD13_02820 62a21078995216c7728ba01580a2c2a3 434 SMART SM00977 354 427 5.2E-20 T 17-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 BJD13_02820 62a21078995216c7728ba01580a2c2a3 434 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 17 198 5.0E-50 T 17-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 BJD13_02820 62a21078995216c7728ba01580a2c2a3 434 Gene3D G3DSA:3.40.50.620 11 227 1.9E-69 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD13_02820 62a21078995216c7728ba01580a2c2a3 434 Pfam PF01171 PP-loop family 17 194 2.3E-55 T 17-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 BJD13_02820 62a21078995216c7728ba01580a2c2a3 434 Gene3D G3DSA:1.20.59.20 229 313 3.4E-11 T 17-10-2018 BJD13_02820 62a21078995216c7728ba01580a2c2a3 434 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 5 302 22.799 T 17-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 BJD13_02820 62a21078995216c7728ba01580a2c2a3 434 Pfam PF09179 TilS substrate binding domain 243 309 4.4E-10 T 17-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 BJD13_02820 62a21078995216c7728ba01580a2c2a3 434 SUPERFAMILY SSF56037 318 428 2.43E-22 T 17-10-2018 BJD13_02820 62a21078995216c7728ba01580a2c2a3 434 SUPERFAMILY SSF82829 233 313 8.63E-15 T 17-10-2018 BJD13_02820 62a21078995216c7728ba01580a2c2a3 434 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 354 399 6.7E-15 T 17-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 BJD13_06200 bfddc31eaf70795e444663cc843c3fa7 380 SUPERFAMILY SSF69572 114 361 2.75E-97 T 17-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 BJD13_06200 bfddc31eaf70795e444663cc843c3fa7 380 Gene3D G3DSA:3.40.50.720 112 364 7.2E-94 T 17-10-2018 BJD13_06200 bfddc31eaf70795e444663cc843c3fa7 380 Pfam PF00899 ThiF family 119 356 6.7E-71 T 17-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 BJD13_06200 bfddc31eaf70795e444663cc843c3fa7 380 Pfam PF00581 Rhodanese-like domain 17 98 1.1E-7 T 17-10-2018 IPR001763 Rhodanese-like domain BJD13_06200 bfddc31eaf70795e444663cc843c3fa7 380 SMART SM00450 6 102 2.0E-11 T 17-10-2018 IPR001763 Rhodanese-like domain BJD13_06200 bfddc31eaf70795e444663cc843c3fa7 380 Gene3D G3DSA:3.40.250.10 5 105 2.1E-20 T 17-10-2018 IPR036873 Rhodanese-like domain superfamily BJD13_06200 bfddc31eaf70795e444663cc843c3fa7 380 SUPERFAMILY SSF52821 4 105 1.83E-23 T 17-10-2018 IPR036873 Rhodanese-like domain superfamily BJD13_23285 11a6a97bceb9a9ca16deeb27c971026b 344 Gene3D G3DSA:3.30.420.40 23 333 4.7E-87 T 17-10-2018 BJD13_23285 11a6a97bceb9a9ca16deeb27c971026b 344 Pfam PF02685 Glucokinase 24 338 3.1E-97 T 17-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 BJD13_23285 11a6a97bceb9a9ca16deeb27c971026b 344 Gene3D G3DSA:3.40.367.20 120 322 4.7E-87 T 17-10-2018 BJD13_23285 11a6a97bceb9a9ca16deeb27c971026b 344 SUPERFAMILY SSF53067 22 340 6.03E-48 T 17-10-2018 BJD13_01710 478c25a2cbcafb4c0baf43383d798f1e 462 Pfam PF00324 Amino acid permease 28 448 1.2E-92 T 17-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 BJD13_01710 478c25a2cbcafb4c0baf43383d798f1e 462 ProSitePatterns PS00218 Amino acid permeases signature. 52 82 - T 17-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 BJD13_01710 478c25a2cbcafb4c0baf43383d798f1e 462 PIRSF PIRSF006060 6 456 1.6E-68 T 17-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BJD13_01710 478c25a2cbcafb4c0baf43383d798f1e 462 Gene3D G3DSA:1.20.1740.10 20 461 9.9E-69 T 17-10-2018 BJD13_11415 a888de123a5ac32c350d1319b638808b 493 Gene3D G3DSA:1.10.443.10 274 473 1.9E-19 T 17-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 BJD13_11415 a888de123a5ac32c350d1319b638808b 493 Gene3D G3DSA:1.10.150.130 156 269 1.0E-5 T 17-10-2018 IPR010998 Integrase/recombinase, N-terminal BJD13_11415 a888de123a5ac32c350d1319b638808b 493 SUPERFAMILY SSF56349 160 445 2.71E-36 T 17-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BJD13_11415 a888de123a5ac32c350d1319b638808b 493 Pfam PF00589 Phage integrase family 287 446 1.0E-9 T 17-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 BJD13_05280 5d1c1d57f04af403b06df78708c18e2e 638 SUPERFAMILY SSF143975 3 420 2.62E-136 T 17-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 BJD13_05280 5d1c1d57f04af403b06df78708c18e2e 638 Gene3D G3DSA:3.50.30.80 421 570 5.8E-49 T 17-10-2018 BJD13_05280 5d1c1d57f04af403b06df78708c18e2e 638 SUPERFAMILY SSF52016 421 601 3.22E-51 T 17-10-2018 BJD13_05280 5d1c1d57f04af403b06df78708c18e2e 638 Pfam PF00920 Dehydratase family 68 599 2.4E-149 T 17-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 BJD13_05280 5d1c1d57f04af403b06df78708c18e2e 638 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 507 518 - T 17-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 BJD13_05280 5d1c1d57f04af403b06df78708c18e2e 638 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 4 602 1.0E-267 T 17-10-2018 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 BJD13_05280 5d1c1d57f04af403b06df78708c18e2e 638 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 156 166 - T 17-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 BJD13_05280 5d1c1d57f04af403b06df78708c18e2e 638 Hamap MF_02094 Phosphogluconate dehydratase [edd]. 3 603 55.317 T 17-10-2018 BJD13_20705 76ccbccdf515d393d0a4a44caa9cbbbf 159 Pfam PF01037 Lrp/AsnC ligand binding domain 74 148 1.4E-20 T 17-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain BJD13_20705 76ccbccdf515d393d0a4a44caa9cbbbf 159 ProSitePatterns PS00519 AsnC-type HTH domain signature. 26 52 - T 17-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site BJD13_20705 76ccbccdf515d393d0a4a44caa9cbbbf 159 SMART SM00344 8 117 7.0E-46 T 17-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 BJD13_20705 76ccbccdf515d393d0a4a44caa9cbbbf 159 Gene3D G3DSA:3.30.70.920 62 158 2.6E-21 T 17-10-2018 BJD13_20705 76ccbccdf515d393d0a4a44caa9cbbbf 159 SUPERFAMILY SSF54909 70 157 2.41E-20 T 17-10-2018 IPR011008 Dimeric alpha-beta barrel BJD13_20705 76ccbccdf515d393d0a4a44caa9cbbbf 159 Pfam PF13404 AsnC-type helix-turn-helix domain 8 49 3.9E-20 T 17-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BJD13_20705 76ccbccdf515d393d0a4a44caa9cbbbf 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 54 3.6E-19 T 17-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BJD13_20705 76ccbccdf515d393d0a4a44caa9cbbbf 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 24 35 3.6E-19 T 17-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BJD13_20705 76ccbccdf515d393d0a4a44caa9cbbbf 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 8 24 3.6E-19 T 17-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BJD13_20705 76ccbccdf515d393d0a4a44caa9cbbbf 159 Gene3D G3DSA:1.10.10.10 1 61 1.8E-26 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_20705 76ccbccdf515d393d0a4a44caa9cbbbf 159 SUPERFAMILY SSF46785 7 66 1.71E-18 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_10235 f1395075d38a220cfab06ffa2c37893a 274 PRINTS PR00996 Glutamate methyltransferase family signature 103 123 1.9E-20 T 17-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BJD13_10235 f1395075d38a220cfab06ffa2c37893a 274 PRINTS PR00996 Glutamate methyltransferase family signature 228 251 1.9E-20 T 17-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BJD13_10235 f1395075d38a220cfab06ffa2c37893a 274 PRINTS PR00996 Glutamate methyltransferase family signature 209 223 1.9E-20 T 17-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BJD13_10235 f1395075d38a220cfab06ffa2c37893a 274 PRINTS PR00996 Glutamate methyltransferase family signature 67 79 1.9E-20 T 17-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BJD13_10235 f1395075d38a220cfab06ffa2c37893a 274 PRINTS PR00996 Glutamate methyltransferase family signature 135 151 1.9E-20 T 17-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BJD13_10235 f1395075d38a220cfab06ffa2c37893a 274 SMART SM00138 8 271 2.2E-28 T 17-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BJD13_10235 f1395075d38a220cfab06ffa2c37893a 274 Gene3D G3DSA:3.40.50.150 73 273 1.1E-52 T 17-10-2018 BJD13_10235 f1395075d38a220cfab06ffa2c37893a 274 Pfam PF03705 CheR methyltransferase, all-alpha domain 10 61 5.9E-9 T 17-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal BJD13_10235 f1395075d38a220cfab06ffa2c37893a 274 Pfam PF01739 CheR methyltransferase, SAM binding domain 75 262 4.5E-35 T 17-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal BJD13_10235 f1395075d38a220cfab06ffa2c37893a 274 SUPERFAMILY SSF53335 75 253 4.95E-38 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_06675 788e4d71111f8c023a15c7635dbe7b23 294 SUPERFAMILY SSF52540 27 282 1.47E-54 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_06675 788e4d71111f8c023a15c7635dbe7b23 294 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 29 247 2.5E-21 T 17-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain BJD13_06675 788e4d71111f8c023a15c7635dbe7b23 294 PIRSF PIRSF003092 2 292 1.3E-81 T 17-10-2018 IPR025501 ATP binding protein MinD BJD13_06675 788e4d71111f8c023a15c7635dbe7b23 294 Gene3D G3DSA:3.40.50.300 26 268 1.7E-58 T 17-10-2018 BJD13_20190 4a9b118f96b989795193a70e1443131e 212 Pfam PF00182 Chitinase class I 109 148 1.1E-4 T 17-10-2018 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 BJD13_20190 4a9b118f96b989795193a70e1443131e 212 Gene3D G3DSA:1.10.530.70 14 210 4.8E-13 T 17-10-2018 BJD13_20190 4a9b118f96b989795193a70e1443131e 212 SUPERFAMILY SSF53955 6 212 1.07E-41 T 17-10-2018 IPR023346 Lysozyme-like domain superfamily BJD13_16885 26d8e1fa84eb1c7644086db26e4825c4 230 Gene3D G3DSA:1.20.1540.10 15 225 4.5E-27 T 17-10-2018 IPR035952 Rhomboid-like superfamily BJD13_16885 26d8e1fa84eb1c7644086db26e4825c4 230 Pfam PF01694 Rhomboid family 64 218 3.4E-35 T 17-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 BJD13_16885 26d8e1fa84eb1c7644086db26e4825c4 230 SUPERFAMILY SSF144091 12 220 7.85E-33 T 17-10-2018 BJD13_15800 9a4d59d49f0bb0249925cf759fd139d4 351 PIRSF PIRSF038896 3 336 5.6E-88 T 17-10-2018 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 Reactome: R-HSA-2466712 BJD13_15800 9a4d59d49f0bb0249925cf759fd139d4 351 SUPERFAMILY SSF56281 75 325 3.81E-34 T 17-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BJD13_15800 9a4d59d49f0bb0249925cf759fd139d4 351 Gene3D G3DSA:3.60.15.10 65 341 5.8E-77 T 17-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BJD13_15800 9a4d59d49f0bb0249925cf759fd139d4 351 Pfam PF12706 Beta-lactamase superfamily domain 93 285 4.4E-42 T 17-10-2018 IPR001279 Metallo-beta-lactamase BJD13_21345 43c8261c259a399579903084210d3374 141 Gene3D G3DSA:3.40.50.10110 1 140 1.6E-34 T 17-10-2018 IPR036768 DNA polymerase III subunit chi superfamily BJD13_21345 43c8261c259a399579903084210d3374 141 SUPERFAMILY SSF102400 1 140 9.29E-36 T 17-10-2018 IPR036768 DNA polymerase III subunit chi superfamily BJD13_21345 43c8261c259a399579903084210d3374 141 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 137 1.3E-32 T 17-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 BJD13_15625 1dd10a136d770bd0dda50ee10f2c1907 153 SUPERFAMILY SSF46785 13 150 8.67E-35 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_15625 1dd10a136d770bd0dda50ee10f2c1907 153 Gene3D G3DSA:1.10.10.10 18 153 2.8E-39 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_15625 1dd10a136d770bd0dda50ee10f2c1907 153 Pfam PF01047 MarR family 45 103 4.4E-15 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD13_15625 1dd10a136d770bd0dda50ee10f2c1907 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 98 114 3.8E-7 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD13_15625 1dd10a136d770bd0dda50ee10f2c1907 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 62 78 3.8E-7 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD13_15625 1dd10a136d770bd0dda50ee10f2c1907 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 79 94 3.8E-7 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD13_15625 1dd10a136d770bd0dda50ee10f2c1907 153 SMART SM00347 38 138 3.1E-20 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD13_08610 c1499c3cbe1e7a1e76e9fa24801a1bc4 228 TIGRFAM TIGR02453 TIGR02453: TIGR02453 family protein 6 225 8.6E-82 T 17-10-2018 IPR012808 Conserved hypothetical protein CHP02453 BJD13_08610 c1499c3cbe1e7a1e76e9fa24801a1bc4 228 Pfam PF09365 Conserved hypothetical protein (DUF2461) 10 219 2.5E-58 T 17-10-2018 IPR012808 Conserved hypothetical protein CHP02453 BJD13_08610 c1499c3cbe1e7a1e76e9fa24801a1bc4 228 PIRSF PIRSF028451 1 228 4.0E-97 T 17-10-2018 IPR015996 Uncharacterised conserved protein UCP028451 BJD13_14090 844c7229f5960380d55d331b12960cc2 186 SMART SM00867 7 171 6.9E-70 T 17-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like BJD13_14090 844c7229f5960380d55d331b12960cc2 186 Pfam PF04264 YceI-like domain 8 170 1.4E-44 T 17-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like BJD13_14090 844c7229f5960380d55d331b12960cc2 186 Gene3D G3DSA:2.40.128.110 5 173 3.7E-53 T 17-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily BJD13_14090 844c7229f5960380d55d331b12960cc2 186 SUPERFAMILY SSF101874 5 172 1.01E-54 T 17-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily BJD13_22375 03ff03b8f9fc49cc9a86a59adddd23e5 207 Pfam PF03922 OmpW family 26 207 1.5E-43 T 17-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 BJD13_22375 03ff03b8f9fc49cc9a86a59adddd23e5 207 SUPERFAMILY SSF56925 25 207 4.19E-24 T 17-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel BJD13_22375 03ff03b8f9fc49cc9a86a59adddd23e5 207 Gene3D G3DSA:2.40.160.20 24 207 2.3E-57 T 17-10-2018 BJD13_07270 b80831d504815d6f83d5f5d655b25286 88 Pfam PF01527 Transposase 2 71 4.2E-20 T 17-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 BJD13_07270 b80831d504815d6f83d5f5d655b25286 88 SUPERFAMILY SSF46689 1 73 3.67E-13 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_03460 b80831d504815d6f83d5f5d655b25286 88 Pfam PF01527 Transposase 2 71 4.2E-20 T 17-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 BJD13_03460 b80831d504815d6f83d5f5d655b25286 88 SUPERFAMILY SSF46689 1 73 3.67E-13 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_15925 bfe5001692fb680d47eecffcbd9649b8 480 SMART SM00388 268 334 1.1E-8 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_15925 bfe5001692fb680d47eecffcbd9649b8 480 Gene3D G3DSA:1.10.287.130 244 329 1.6E-11 T 17-10-2018 BJD13_15925 bfe5001692fb680d47eecffcbd9649b8 480 Gene3D G3DSA:3.30.565.10 362 480 3.6E-24 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_15925 bfe5001692fb680d47eecffcbd9649b8 480 SUPERFAMILY SSF47384 263 328 4.32E-9 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD13_15925 bfe5001692fb680d47eecffcbd9649b8 480 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 375 476 6.0E-11 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_15925 bfe5001692fb680d47eecffcbd9649b8 480 Pfam PF00512 His Kinase A (phospho-acceptor) domain 268 326 1.5E-9 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_15925 bfe5001692fb680d47eecffcbd9649b8 480 SUPERFAMILY SSF55874 365 476 6.43E-26 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_15925 bfe5001692fb680d47eecffcbd9649b8 480 SMART SM00387 374 479 8.5E-23 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_15925 bfe5001692fb680d47eecffcbd9649b8 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 458 9.3E-8 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_15925 bfe5001692fb680d47eecffcbd9649b8 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 425 9.3E-8 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_15925 bfe5001692fb680d47eecffcbd9649b8 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 429 439 9.3E-8 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_22805 c73b5535c6ed74139d0e1a50d427bc3b 144 Pfam PF04134 Protein of unknown function, DUF393 18 127 2.8E-32 T 17-10-2018 IPR007263 Protein of unknown function DUF393 BJD13_19800 5a29c78508d340a6c6d9a75d9f3e4594 241 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 12 219 1.2E-78 T 17-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BJD13_19800 5a29c78508d340a6c6d9a75d9f3e4594 241 Gene3D G3DSA:3.40.470.10 2 234 4.9E-95 T 17-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BJD13_19800 5a29c78508d340a6c6d9a75d9f3e4594 241 SMART SM00986 56 216 1.6E-41 T 17-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BJD13_19800 5a29c78508d340a6c6d9a75d9f3e4594 241 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 11 227 39.842 T 17-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BJD13_19800 5a29c78508d340a6c6d9a75d9f3e4594 241 SMART SM00987 56 216 1.6E-41 T 17-10-2018 BJD13_19800 5a29c78508d340a6c6d9a75d9f3e4594 241 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 64 73 - T 17-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BJD13_19800 5a29c78508d340a6c6d9a75d9f3e4594 241 SUPERFAMILY SSF52141 9 228 1.57E-90 T 17-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BJD13_19800 5a29c78508d340a6c6d9a75d9f3e4594 241 Pfam PF03167 Uracil DNA glycosylase superfamily 60 213 9.7E-24 T 17-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BJD13_17470 db98b73b40f203e9834f44173bc96a29 128 SUPERFAMILY SSF54427 28 127 4.94E-29 T 17-10-2018 IPR032710 NTF2-like domain superfamily BJD13_17470 db98b73b40f203e9834f44173bc96a29 128 Pfam PF02810 SEC-C motif 7 23 7.5E-5 T 17-10-2018 IPR004027 SEC-C motif BJD13_17470 db98b73b40f203e9834f44173bc96a29 128 Gene3D G3DSA:3.10.450.50 8 128 2.1E-34 T 17-10-2018 BJD13_17470 db98b73b40f203e9834f44173bc96a29 128 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 5 128 29.703 T 17-10-2018 IPR023006 Uncharacterised protein family UPF0225 BJD13_02705 9014065a1d03d4e3a231924cb35565aa 149 Gene3D G3DSA:3.10.129.10 13 148 1.3E-31 T 17-10-2018 BJD13_02705 9014065a1d03d4e3a231924cb35565aa 149 Pfam PF14539 Domain of unknown function (DUF4442) 4 143 2.3E-23 T 17-10-2018 IPR027961 Protein of unknown function DUF4442 BJD13_02705 9014065a1d03d4e3a231924cb35565aa 149 SUPERFAMILY SSF54637 5 144 4.98E-24 T 17-10-2018 IPR029069 HotDog domain superfamily BJD13_11220 7f384d3fbaa6507404ee1fb7b0dc3983 591 SUPERFAMILY SSF52540 139 558 1.57E-31 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_11220 7f384d3fbaa6507404ee1fb7b0dc3983 591 Gene3D G3DSA:3.40.50.300 383 570 1.0E-34 T 17-10-2018 BJD13_11220 7f384d3fbaa6507404ee1fb7b0dc3983 591 Gene3D G3DSA:3.40.50.300 124 230 9.2E-16 T 17-10-2018 BJD13_11220 7f384d3fbaa6507404ee1fb7b0dc3983 591 Pfam PF01935 Domain of unknown function DUF87 153 249 1.1E-18 T 17-10-2018 IPR002789 Helicase HerA, central domain BJD13_23150 66fb648ca2bf11369462f7ee7ed472c6 346 Gene3D G3DSA:1.10.8.60 184 257 1.1E-29 T 17-10-2018 BJD13_23150 66fb648ca2bf11369462f7ee7ed472c6 346 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 252 334 3.0E-41 T 17-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 BJD13_23150 66fb648ca2bf11369462f7ee7ed472c6 346 Gene3D G3DSA:1.10.10.10 259 336 6.8E-32 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_23150 66fb648ca2bf11369462f7ee7ed472c6 346 SUPERFAMILY SSF52540 22 254 1.97E-53 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_23150 66fb648ca2bf11369462f7ee7ed472c6 346 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 255 328 6.2E-33 T 17-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 BJD13_23150 66fb648ca2bf11369462f7ee7ed472c6 346 Gene3D G3DSA:3.40.50.300 20 183 2.5E-38 T 17-10-2018 BJD13_23150 66fb648ca2bf11369462f7ee7ed472c6 346 SMART SM00382 53 180 3.4E-12 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_23150 66fb648ca2bf11369462f7ee7ed472c6 346 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 346 178.037 T 17-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 BJD13_23150 66fb648ca2bf11369462f7ee7ed472c6 346 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 6 237 1.3E-117 T 17-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 BJD13_23150 66fb648ca2bf11369462f7ee7ed472c6 346 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 25 328 2.6E-144 T 17-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 BJD13_23150 66fb648ca2bf11369462f7ee7ed472c6 346 SUPERFAMILY SSF46785 259 332 4.54E-25 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_21555 8efc4246dffb0a48d9c3f77edac58e5c 787 Gene3D G3DSA:2.60.120.260 72 201 2.7E-34 T 17-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD13_21555 8efc4246dffb0a48d9c3f77edac58e5c 787 Gene3D G3DSA:2.60.120.260 364 521 3.6E-24 T 17-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD13_21555 8efc4246dffb0a48d9c3f77edac58e5c 787 PRINTS PR01440 Cellulose synthase subunit B signature 566 586 2.3E-36 T 17-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 BJD13_21555 8efc4246dffb0a48d9c3f77edac58e5c 787 PRINTS PR01440 Cellulose synthase subunit B signature 529 548 2.3E-36 T 17-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 BJD13_21555 8efc4246dffb0a48d9c3f77edac58e5c 787 PRINTS PR01440 Cellulose synthase subunit B signature 726 746 2.3E-36 T 17-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 BJD13_21555 8efc4246dffb0a48d9c3f77edac58e5c 787 PRINTS PR01440 Cellulose synthase subunit B signature 398 419 2.3E-36 T 17-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 BJD13_21555 8efc4246dffb0a48d9c3f77edac58e5c 787 PRINTS PR01440 Cellulose synthase subunit B signature 230 253 2.3E-36 T 17-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 BJD13_21555 8efc4246dffb0a48d9c3f77edac58e5c 787 PRINTS PR01440 Cellulose synthase subunit B signature 98 119 2.3E-36 T 17-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 BJD13_21555 8efc4246dffb0a48d9c3f77edac58e5c 787 PRINTS PR01440 Cellulose synthase subunit B signature 274 291 2.3E-36 T 17-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 BJD13_21555 8efc4246dffb0a48d9c3f77edac58e5c 787 PRINTS PR01440 Cellulose synthase subunit B signature 188 209 2.3E-36 T 17-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 BJD13_21555 8efc4246dffb0a48d9c3f77edac58e5c 787 Pfam PF03170 Bacterial cellulose synthase subunit 71 686 8.0E-208 T 17-10-2018 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 BJD13_08240 4e5a4c390e5dca2868942d725b668327 180 SUPERFAMILY SSF52833 33 178 6.98E-33 T 17-10-2018 IPR036249 Thioredoxin-like superfamily BJD13_08240 4e5a4c390e5dca2868942d725b668327 180 Gene3D G3DSA:3.40.30.10 22 177 2.8E-38 T 17-10-2018 BJD13_08240 4e5a4c390e5dca2868942d725b668327 180 Pfam PF00578 AhpC/TSA family 37 154 1.9E-14 T 17-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 BJD13_08240 4e5a4c390e5dca2868942d725b668327 180 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 4 172 4.1E-50 T 17-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 BJD13_10170 0ad2e61b4f3c725109561f35763944c0 170 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 8 169 1.9E-51 T 17-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 BJD13_10170 0ad2e61b4f3c725109561f35763944c0 170 SUPERFAMILY SSF50346 101 170 6.67E-17 T 17-10-2018 IPR011033 PRC-barrel-like superfamily BJD13_10170 0ad2e61b4f3c725109561f35763944c0 170 Pfam PF01782 RimM N-terminal domain 10 92 9.7E-21 T 17-10-2018 IPR002676 RimM, N-terminal GO:0006364 BJD13_10170 0ad2e61b4f3c725109561f35763944c0 170 SUPERFAMILY SSF50447 8 95 2.93E-18 T 17-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BJD13_10170 0ad2e61b4f3c725109561f35763944c0 170 Gene3D G3DSA:2.30.30.240 97 170 1.7E-24 T 17-10-2018 BJD13_10170 0ad2e61b4f3c725109561f35763944c0 170 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 7 170 22.451 T 17-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 BJD13_10170 0ad2e61b4f3c725109561f35763944c0 170 Gene3D G3DSA:2.40.30.60 1 95 1.8E-25 T 17-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 BJD13_10170 0ad2e61b4f3c725109561f35763944c0 170 Pfam PF05239 PRC-barrel domain 98 165 1.3E-5 T 17-10-2018 IPR027275 PRC-barrel domain BJD13_07185 adb9a2e67373ac3dc2947d51c9a0e7be 244 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 4 244 31.539 T 17-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 BJD13_07185 adb9a2e67373ac3dc2947d51c9a0e7be 244 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 5 241 4.6E-74 T 17-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 BJD13_07185 adb9a2e67373ac3dc2947d51c9a0e7be 244 Pfam PF00977 Histidine biosynthesis protein 5 236 2.4E-69 T 17-10-2018 IPR006062 Histidine biosynthesis GO:0000105 BJD13_07185 adb9a2e67373ac3dc2947d51c9a0e7be 244 Gene3D G3DSA:3.20.20.70 4 244 8.9E-82 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD13_07185 adb9a2e67373ac3dc2947d51c9a0e7be 244 SUPERFAMILY SSF51366 3 243 3.14E-61 T 17-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 BJD13_19120 53101b5a3c220b95fe07fdddbace6407 363 Gene3D G3DSA:1.20.1280.120 50 341 2.7E-101 T 17-10-2018 BJD13_19120 53101b5a3c220b95fe07fdddbace6407 363 Gene3D G3DSA:2.40.180.20 70 327 2.7E-101 T 17-10-2018 BJD13_19120 53101b5a3c220b95fe07fdddbace6407 363 PIRSF PIRSF000296 16 348 1.8E-111 T 17-10-2018 IPR024168 Catalase, SrpA-type, predicted BJD13_19120 53101b5a3c220b95fe07fdddbace6407 363 Pfam PF00199 Catalase 64 341 3.3E-24 T 17-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BJD13_19120 53101b5a3c220b95fe07fdddbace6407 363 SMART SM01060 23 363 3.0E-6 T 17-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BJD13_19120 53101b5a3c220b95fe07fdddbace6407 363 SUPERFAMILY SSF56634 32 344 6.94E-88 T 17-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BJD13_19225 eea674ed02dbcc3481ca9b47498bd01e 289 Gene3D G3DSA:3.40.50.1820 28 243 5.0E-59 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_19225 eea674ed02dbcc3481ca9b47498bd01e 289 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 83 113 - T 17-10-2018 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 BJD13_19225 eea674ed02dbcc3481ca9b47498bd01e 289 SUPERFAMILY SSF53474 7 238 4.4E-38 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_19225 eea674ed02dbcc3481ca9b47498bd01e 289 Pfam PF00326 Prolyl oligopeptidase family 51 239 5.9E-12 T 17-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 BJD13_11765 d7d3c2ad9ed26a6aab90df7ae4057a4d 375 Pfam PF00924 Mechanosensitive ion channel 139 331 1.6E-23 T 17-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 BJD13_11765 d7d3c2ad9ed26a6aab90df7ae4057a4d 375 SUPERFAMILY SSF50182 179 244 7.85E-13 T 17-10-2018 IPR010920 LSM domain superfamily BJD13_21660 abe153ad565c84ca750af951c7b183c1 216 Gene3D G3DSA:3.40.50.1110 9 204 3.5E-24 T 17-10-2018 IPR036514 SGNH hydrolase superfamily BJD13_21660 abe153ad565c84ca750af951c7b183c1 216 SUPERFAMILY SSF52266 5 200 9.01E-30 T 17-10-2018 BJD13_21660 abe153ad565c84ca750af951c7b183c1 216 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 12 192 2.8E-25 T 17-10-2018 IPR013830 SGNH hydrolase-type esterase domain BJD13_05535 d20f7133a95af0febdc221f7a2664deb 140 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 45 121 4.6E-21 T 17-10-2018 IPR006260 TonB/TolA, C-terminal BJD13_05535 d20f7133a95af0febdc221f7a2664deb 140 Gene3D G3DSA:3.30.1150.10 22 120 4.2E-23 T 17-10-2018 BJD13_05535 d20f7133a95af0febdc221f7a2664deb 140 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 43 120 7.0E-22 T 17-10-2018 IPR037682 TonB, C-terminal GO:0055085 BJD13_05535 d20f7133a95af0febdc221f7a2664deb 140 SUPERFAMILY SSF74653 38 119 1.83E-20 T 17-10-2018 BJD13_08525 80befe22950978ed100764bd8cf1cf79 211 Gene3D G3DSA:2.30.110.10 1 205 1.7E-49 T 17-10-2018 IPR012349 FMN-binding split barrel GO:0048037 BJD13_08525 80befe22950978ed100764bd8cf1cf79 211 SUPERFAMILY SSF50475 9 186 5.05E-28 T 17-10-2018 BJD13_08525 80befe22950978ed100764bd8cf1cf79 211 Pfam PF04299 Putative FMN-binding domain 1 159 9.9E-38 T 17-10-2018 IPR007396 Transcriptional regulator PAI 2-type BJD13_08525 80befe22950978ed100764bd8cf1cf79 211 PIRSF PIRSF010372 1 207 6.1E-45 T 17-10-2018 IPR007396 Transcriptional regulator PAI 2-type BJD13_17225 76d4af9a7abf0965bc2288b5949a71c9 79 SUPERFAMILY SSF143011 6 79 6.67E-14 T 17-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily BJD13_17225 76d4af9a7abf0965bc2288b5949a71c9 79 Gene3D G3DSA:3.30.2310.20 2 79 3.6E-21 T 17-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily BJD13_17225 76d4af9a7abf0965bc2288b5949a71c9 79 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 2 79 6.6E-18 T 17-10-2018 IPR007711 Toxin HigB-1 BJD13_17120 b13d630b163d5e453dc3fa7e639a9a69 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 6.6E-14 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_17120 b13d630b163d5e453dc3fa7e639a9a69 310 Gene3D G3DSA:3.40.190.10 91 285 1.5E-52 T 17-10-2018 BJD13_17120 b13d630b163d5e453dc3fa7e639a9a69 310 SUPERFAMILY SSF53850 90 296 7.06E-40 T 17-10-2018 BJD13_17120 b13d630b163d5e453dc3fa7e639a9a69 310 Gene3D G3DSA:3.40.190.10 164 264 1.5E-52 T 17-10-2018 BJD13_17120 b13d630b163d5e453dc3fa7e639a9a69 310 Gene3D G3DSA:1.10.10.10 2 85 4.0E-19 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_17120 b13d630b163d5e453dc3fa7e639a9a69 310 Pfam PF03466 LysR substrate binding domain 89 293 2.0E-39 T 17-10-2018 IPR005119 LysR, substrate-binding BJD13_17120 b13d630b163d5e453dc3fa7e639a9a69 310 SUPERFAMILY SSF46785 2 112 2.12E-17 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_15535 df0657b3b6a44df5a26d22064ed02712 418 PIRSF PIRSF000524 13 418 3.8E-108 T 17-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 BJD13_15535 df0657b3b6a44df5a26d22064ed02712 418 SUPERFAMILY SSF53383 17 394 1.08E-89 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD13_15535 df0657b3b6a44df5a26d22064ed02712 418 Gene3D G3DSA:3.40.640.10 30 291 2.9E-131 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD13_15535 df0657b3b6a44df5a26d22064ed02712 418 Gene3D G3DSA:3.90.1150.10 19 389 2.9E-131 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD13_15535 df0657b3b6a44df5a26d22064ed02712 418 Pfam PF00266 Aminotransferase class-V 42 357 2.1E-22 T 17-10-2018 IPR000192 Aminotransferase class V domain BJD13_23015 b2d2707e2cf18017f332cb17a9232759 799 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 171 4.1E-23 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_23015 b2d2707e2cf18017f332cb17a9232759 799 Gene3D G3DSA:2.40.170.20 194 799 2.1E-53 T 17-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BJD13_23015 b2d2707e2cf18017f332cb17a9232759 799 SUPERFAMILY SSF56935 36 799 2.42E-102 T 17-10-2018 BJD13_23015 b2d2707e2cf18017f332cb17a9232759 799 Pfam PF00593 TonB dependent receptor 298 798 4.9E-32 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_23015 b2d2707e2cf18017f332cb17a9232759 799 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 43 - T 17-10-2018 IPR010916 TonB box, conserved site BJD13_23015 b2d2707e2cf18017f332cb17a9232759 799 Gene3D G3DSA:2.170.130.10 32 175 3.9E-35 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_18565 ea872e9a7bc9940602689202cb6773c4 95 PIRSF PIRSF030962 1 81 3.6E-9 T 17-10-2018 IPR016962 Dehydrase, ECs4332, predicted KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BJD13_18565 ea872e9a7bc9940602689202cb6773c4 95 Pfam PF07977 FabA-like domain 6 60 7.2E-7 T 17-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BJD13_18565 ea872e9a7bc9940602689202cb6773c4 95 SUPERFAMILY SSF54637 4 93 1.46E-15 T 17-10-2018 IPR029069 HotDog domain superfamily BJD13_18565 ea872e9a7bc9940602689202cb6773c4 95 Gene3D G3DSA:3.10.129.10 1 94 2.0E-19 T 17-10-2018 BJD13_10405 79d41b472fa47a3054acabd322999783 988 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 6 926 0.0 T 17-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 BJD13_10405 79d41b472fa47a3054acabd322999783 988 Gene3D G3DSA:1.20.1580.10 92 494 8.1E-243 T 17-10-2018 BJD13_10405 79d41b472fa47a3054acabd322999783 988 SUPERFAMILY SSF52540 3 571 4.99E-48 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_10405 79d41b472fa47a3054acabd322999783 988 ProSitePatterns PS00211 ABC transporters family signature. 831 845 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD13_10405 79d41b472fa47a3054acabd322999783 988 Gene3D G3DSA:1.20.1580.10 693 831 2.2E-139 T 17-10-2018 BJD13_10405 79d41b472fa47a3054acabd322999783 988 Gene3D G3DSA:3.40.50.300 8 597 8.1E-243 T 17-10-2018 BJD13_10405 79d41b472fa47a3054acabd322999783 988 Gene3D G3DSA:1.10.8.280 289 405 8.1E-243 T 17-10-2018 BJD13_10405 79d41b472fa47a3054acabd322999783 988 SUPERFAMILY SSF52540 616 915 6.52E-53 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_10405 79d41b472fa47a3054acabd322999783 988 Hamap MF_00205 UvrABC system protein A [uvrA]. 3 941 22.544 T 17-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 BJD13_10405 79d41b472fa47a3054acabd322999783 988 Gene3D G3DSA:3.30.190.20 132 241 8.1E-243 T 17-10-2018 BJD13_10405 79d41b472fa47a3054acabd322999783 988 Pfam PF00005 ABC transporter 625 861 3.8E-10 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD13_10405 79d41b472fa47a3054acabd322999783 988 ProSitePatterns PS00211 ABC transporters family signature. 489 503 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD13_10405 79d41b472fa47a3054acabd322999783 988 Gene3D G3DSA:3.40.50.300 618 937 2.2E-139 T 17-10-2018 BJD13_15685 3d0aa0d28b7364cbbc0c4305f54574d9 214 SUPERFAMILY SSF49478 139 188 1.45E-6 T 17-10-2018 BJD13_05560 c7a38983e63f0d30ac2188b5f0db7a7b 370 Gene3D G3DSA:2.40.50.100 62 207 8.2E-70 T 17-10-2018 BJD13_05560 c7a38983e63f0d30ac2188b5f0db7a7b 370 Gene3D G3DSA:2.40.30.170 56 276 8.2E-70 T 17-10-2018 BJD13_05560 c7a38983e63f0d30ac2188b5f0db7a7b 370 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 365 1.6E-82 T 17-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 BJD13_05560 c7a38983e63f0d30ac2188b5f0db7a7b 370 Gene3D G3DSA:1.10.287.470 97 170 8.2E-70 T 17-10-2018 BJD13_05560 c7a38983e63f0d30ac2188b5f0db7a7b 370 Pfam PF00529 HlyD membrane-fusion protein of T1SS 287 352 1.6E-7 T 17-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 BJD13_05560 c7a38983e63f0d30ac2188b5f0db7a7b 370 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 54 286 4.7E-14 T 17-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BJD13_05560 c7a38983e63f0d30ac2188b5f0db7a7b 370 Gene3D G3DSA:2.40.420.20 277 368 9.1E-23 T 17-10-2018 BJD13_05560 c7a38983e63f0d30ac2188b5f0db7a7b 370 SUPERFAMILY SSF111369 51 292 9.29E-67 T 17-10-2018 BJD13_09175 7583d3d4e4239bc4746ed4e2892c6025 646 SUPERFAMILY SSF56235 1 219 3.09E-64 T 17-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BJD13_09175 7583d3d4e4239bc4746ed4e2892c6025 646 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 570 5.7E-142 T 17-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 BJD13_09175 7583d3d4e4239bc4746ed4e2892c6025 646 Gene3D G3DSA:3.60.20.10 8 186 1.9E-63 T 17-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BJD13_09175 7583d3d4e4239bc4746ed4e2892c6025 646 Pfam PF13537 Glutamine amidotransferase domain 52 171 4.3E-47 T 17-10-2018 IPR017932 Glutamine amidotransferase type 2 domain BJD13_09175 7583d3d4e4239bc4746ed4e2892c6025 646 SUPERFAMILY SSF52402 253 630 8.38E-86 T 17-10-2018 BJD13_09175 7583d3d4e4239bc4746ed4e2892c6025 646 Pfam PF00733 Asparagine synthase 263 634 5.8E-110 T 17-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 BJD13_09175 7583d3d4e4239bc4746ed4e2892c6025 646 PIRSF PIRSF001589 1 646 3.6E-158 T 17-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 BJD13_00940 a6397554aa17fc73f06d9552cacc28c6 250 Gene3D G3DSA:3.40.30.10 83 238 4.2E-43 T 17-10-2018 BJD13_00940 a6397554aa17fc73f06d9552cacc28c6 250 SUPERFAMILY SSF52833 101 237 4.07E-31 T 17-10-2018 IPR036249 Thioredoxin-like superfamily BJD13_00940 a6397554aa17fc73f06d9552cacc28c6 250 Pfam PF13098 Thioredoxin-like domain 115 235 3.0E-18 T 17-10-2018 IPR012336 Thioredoxin-like fold BJD13_00940 a6397554aa17fc73f06d9552cacc28c6 250 SUPERFAMILY SSF54423 29 85 1.7E-9 T 17-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 BJD13_00940 a6397554aa17fc73f06d9552cacc28c6 250 Pfam PF10411 Disulfide bond isomerase protein N-terminus 31 81 9.4E-11 T 17-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal BJD13_00940 a6397554aa17fc73f06d9552cacc28c6 250 Gene3D G3DSA:3.10.450.70 22 82 6.1E-10 T 17-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 BJD13_13645 a03fe1128c43231aa3bccd39b63254bb 495 SUPERFAMILY SSF52091 401 485 4.71E-13 T 17-10-2018 IPR036513 STAS domain superfamily BJD13_13645 a03fe1128c43231aa3bccd39b63254bb 495 Pfam PF00916 Sulfate permease family 145 359 1.1E-26 T 17-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 BJD13_13645 a03fe1128c43231aa3bccd39b63254bb 495 Gene3D G3DSA:3.30.750.24 395 486 1.4E-25 T 17-10-2018 IPR036513 STAS domain superfamily BJD13_13645 a03fe1128c43231aa3bccd39b63254bb 495 Pfam PF01740 STAS domain 401 485 2.2E-7 T 17-10-2018 IPR002645 STAS domain BJD13_15180 eae7cd28dc8f31baece572d568b4ad54 255 Gene3D G3DSA:3.40.50.720 1 252 7.6E-46 T 17-10-2018 BJD13_15180 eae7cd28dc8f31baece572d568b4ad54 255 Pfam PF00106 short chain dehydrogenase 6 121 1.2E-12 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_15180 eae7cd28dc8f31baece572d568b4ad54 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 152 250 9.0E-15 T 17-10-2018 BJD13_15180 eae7cd28dc8f31baece572d568b4ad54 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 67 78 1.8E-23 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_15180 eae7cd28dc8f31baece572d568b4ad54 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 104 120 1.8E-23 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_15180 eae7cd28dc8f31baece572d568b4ad54 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.8E-23 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_15180 eae7cd28dc8f31baece572d568b4ad54 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 1.8E-23 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_15180 eae7cd28dc8f31baece572d568b4ad54 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.8E-23 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_15180 eae7cd28dc8f31baece572d568b4ad54 255 SUPERFAMILY SSF51735 5 252 4.42E-47 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_18625 77a4529f25049c083a194ae2387549d1 273 SUPERFAMILY SSF53448 11 225 5.28E-31 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD13_18625 77a4529f25049c083a194ae2387549d1 273 Pfam PF00535 Glycosyl transferase family 2 13 134 5.9E-19 T 17-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BJD13_18625 77a4529f25049c083a194ae2387549d1 273 Gene3D G3DSA:3.90.550.10 2 252 8.3E-39 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD13_19855 811d303662cb70a964c99e073bd6cd87 458 TIGRFAM TIGR00797 matE: MATE efflux family protein 27 427 3.5E-76 T 17-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BJD13_19855 811d303662cb70a964c99e073bd6cd87 458 Pfam PF01554 MatE 27 185 1.5E-23 T 17-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BJD13_19855 811d303662cb70a964c99e073bd6cd87 458 Pfam PF01554 MatE 253 412 1.2E-28 T 17-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BJD13_08775 1f90250c949f3160a1a16109742bf554 249 SMART SM00967 7 83 4.5E-11 T 17-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 BJD13_08775 1f90250c949f3160a1a16109742bf554 249 Gene3D G3DSA:3.40.1280.10 81 247 3.2E-59 T 17-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BJD13_08775 1f90250c949f3160a1a16109742bf554 249 Gene3D G3DSA:3.30.1330.30 1 78 2.5E-16 T 17-10-2018 IPR029064 50S ribosomal protein L30e-like BJD13_08775 1f90250c949f3160a1a16109742bf554 249 Pfam PF00588 SpoU rRNA Methylase family 100 239 2.4E-39 T 17-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 BJD13_08775 1f90250c949f3160a1a16109742bf554 249 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 5 247 39.872 T 17-10-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB BJD13_08775 1f90250c949f3160a1a16109742bf554 249 SUPERFAMILY SSF55315 2 76 3.88E-14 T 17-10-2018 IPR029064 50S ribosomal protein L30e-like BJD13_08775 1f90250c949f3160a1a16109742bf554 249 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 6 246 2.7E-72 T 17-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 BJD13_08775 1f90250c949f3160a1a16109742bf554 249 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 7 81 8.2E-13 T 17-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 BJD13_08775 1f90250c949f3160a1a16109742bf554 249 SUPERFAMILY SSF75217 72 247 1.37E-47 T 17-10-2018 IPR029028 Alpha/beta knot methyltransferases BJD13_10950 216dd48d03d49c698a31d3b3ccd17043 128 SMART SM00448 2 115 1.1E-39 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_10950 216dd48d03d49c698a31d3b3ccd17043 128 Pfam PF00072 Response regulator receiver domain 4 114 2.9E-27 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_10950 216dd48d03d49c698a31d3b3ccd17043 128 SUPERFAMILY SSF52172 1 121 8.82E-39 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_10950 216dd48d03d49c698a31d3b3ccd17043 128 Gene3D G3DSA:3.40.50.12740 1 127 7.9E-43 T 17-10-2018 BJD13_12895 a4510ed9244a6f7514d618cabb113541 273 SUPERFAMILY SSF53790 5 225 3.53E-78 T 17-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 BJD13_12895 a4510ed9244a6f7514d618cabb113541 273 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 7 206 1.4E-30 T 17-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 BJD13_12895 a4510ed9244a6f7514d618cabb113541 273 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 6 227 37.243 T 17-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 BJD13_12895 a4510ed9244a6f7514d618cabb113541 273 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 7 271 1.1E-80 T 17-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 BJD13_12895 a4510ed9244a6f7514d618cabb113541 273 Gene3D G3DSA:3.30.950.10 114 233 3.3E-41 T 17-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 BJD13_12895 a4510ed9244a6f7514d618cabb113541 273 Gene3D G3DSA:3.40.1010.10 1 113 3.2E-41 T 17-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 BJD13_12895 a4510ed9244a6f7514d618cabb113541 273 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 84 95 - T 17-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 BJD13_12895 a4510ed9244a6f7514d618cabb113541 273 PIRSF PIRSF005917 1 273 1.8E-96 T 17-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 BJD13_21855 cdb9b366a5f909cb85c36356e1d46455 294 Gene3D G3DSA:1.10.10.10 1 84 2.2E-27 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_21855 cdb9b366a5f909cb85c36356e1d46455 294 Gene3D G3DSA:3.40.190.290 91 291 7.5E-42 T 17-10-2018 BJD13_21855 cdb9b366a5f909cb85c36356e1d46455 294 SUPERFAMILY SSF53850 90 292 2.01E-43 T 17-10-2018 BJD13_21855 cdb9b366a5f909cb85c36356e1d46455 294 Pfam PF03466 LysR substrate binding domain 88 289 8.7E-43 T 17-10-2018 IPR005119 LysR, substrate-binding BJD13_21855 cdb9b366a5f909cb85c36356e1d46455 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 2.3E-21 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_21855 cdb9b366a5f909cb85c36356e1d46455 294 SUPERFAMILY SSF46785 1 110 4.77E-25 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_21855 cdb9b366a5f909cb85c36356e1d46455 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.5E-9 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_21855 cdb9b366a5f909cb85c36356e1d46455 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.5E-9 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_21855 cdb9b366a5f909cb85c36356e1d46455 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.5E-9 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_02850 c3c4cb0a3f58e60d4ead7b2d1c4ad826 249 SUPERFAMILY SSF54001 121 248 4.91E-40 T 17-10-2018 IPR038765 Papain-like cysteine peptidase superfamily BJD13_02850 c3c4cb0a3f58e60d4ead7b2d1c4ad826 249 Pfam PF00877 NlpC/P60 family 139 247 1.4E-29 T 17-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain BJD13_19960 eef23313a4bff6543abf5ce41465a269 501 Pfam PF03703 Bacterial PH domain 410 489 3.7E-13 T 17-10-2018 IPR005182 Domain of unknown function DUF304 BJD13_19960 eef23313a4bff6543abf5ce41465a269 501 Pfam PF03703 Bacterial PH domain 70 149 1.7E-19 T 17-10-2018 IPR005182 Domain of unknown function DUF304 BJD13_19960 eef23313a4bff6543abf5ce41465a269 501 Pfam PF03703 Bacterial PH domain 262 336 2.5E-8 T 17-10-2018 IPR005182 Domain of unknown function DUF304 BJD13_19960 eef23313a4bff6543abf5ce41465a269 501 PIRSF PIRSF026631 7 501 2.3E-131 T 17-10-2018 IPR014529 Uncharacterised conserved protein UCP026631 BJD13_11160 19ecbd83a86519b2f7d917b1a1310469 197 SMART SM00493 78 163 4.0E-9 T 17-10-2018 IPR006171 TOPRIM domain BJD13_11160 19ecbd83a86519b2f7d917b1a1310469 197 Pfam PF13662 Toprim domain 79 169 1.4E-21 T 17-10-2018 IPR006171 TOPRIM domain BJD13_11160 19ecbd83a86519b2f7d917b1a1310469 197 Hamap MF_00017 Recombination protein RecR [recR]. 1 196 95.667 T 17-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 BJD13_11160 19ecbd83a86519b2f7d917b1a1310469 197 Gene3D G3DSA:1.10.8.420 1 50 4.5E-17 T 17-10-2018 BJD13_11160 19ecbd83a86519b2f7d917b1a1310469 197 Gene3D G3DSA:3.40.1360.10 75 196 4.6E-40 T 17-10-2018 BJD13_11160 19ecbd83a86519b2f7d917b1a1310469 197 SUPERFAMILY SSF111304 3 195 5.75E-70 T 17-10-2018 IPR023627 Recombination protein RecR BJD13_11160 19ecbd83a86519b2f7d917b1a1310469 197 Pfam PF02132 RecR protein 38 76 4.7E-14 T 17-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger BJD13_11160 19ecbd83a86519b2f7d917b1a1310469 197 ProSitePatterns PS01300 RecR protein signature. 55 76 - T 17-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 BJD13_11160 19ecbd83a86519b2f7d917b1a1310469 197 TIGRFAM TIGR00615 recR: recombination protein RecR 2 193 2.2E-71 T 17-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 BJD13_17665 64b8f4a0d6a2ccea0b78e53918aa7fe5 495 SUPERFAMILY SSF103473 11 436 2.22E-29 T 17-10-2018 IPR036259 MFS transporter superfamily BJD13_17665 64b8f4a0d6a2ccea0b78e53918aa7fe5 495 Gene3D G3DSA:1.20.1250.20 11 211 3.6E-12 T 17-10-2018 BJD13_17665 64b8f4a0d6a2ccea0b78e53918aa7fe5 495 Gene3D G3DSA:1.20.1250.20 227 474 3.0E-10 T 17-10-2018 BJD13_17665 64b8f4a0d6a2ccea0b78e53918aa7fe5 495 Pfam PF13347 MFS/sugar transport protein 15 277 2.9E-55 T 17-10-2018 BJD13_17665 64b8f4a0d6a2ccea0b78e53918aa7fe5 495 Pfam PF13347 MFS/sugar transport protein 305 473 1.6E-31 T 17-10-2018 BJD13_11190 df6e1d7321bf28f86aca8dc92f159da0 100 Pfam PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system 19 92 1.0E-33 T 17-10-2018 IPR018669 Toxin-antitoxin system, toxin component, HigB, putative GO:0016788 BJD13_16890 497023ea04d02bad9116fd3bfacaf947 446 SUPERFAMILY SSF56935 29 446 6.41E-87 T 17-10-2018 BJD13_16890 497023ea04d02bad9116fd3bfacaf947 446 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 20 446 6.0E-129 T 17-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) BJD13_16890 497023ea04d02bad9116fd3bfacaf947 446 Gene3D G3DSA:2.40.160.60 29 446 1.1E-124 T 17-10-2018 BJD13_18655 e7397eef1f8a37199ebd92a3f285f038 616 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 9 502 4.5E-177 T 17-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BJD13_18655 e7397eef1f8a37199ebd92a3f285f038 616 SUPERFAMILY SSF55347 195 500 6.87E-110 T 17-10-2018 BJD13_18655 e7397eef1f8a37199ebd92a3f285f038 616 Gene3D G3DSA:3.30.360.10 195 489 7.5E-175 T 17-10-2018 BJD13_18655 e7397eef1f8a37199ebd92a3f285f038 616 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 9 503 77.44 T 17-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BJD13_18655 e7397eef1f8a37199ebd92a3f285f038 616 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 195 201 - T 17-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BJD13_18655 e7397eef1f8a37199ebd92a3f285f038 616 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 185 213 3.0E-47 T 17-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BJD13_18655 e7397eef1f8a37199ebd92a3f285f038 616 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 255 271 3.0E-47 T 17-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BJD13_18655 e7397eef1f8a37199ebd92a3f285f038 616 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 342 368 3.0E-47 T 17-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BJD13_18655 e7397eef1f8a37199ebd92a3f285f038 616 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 237 254 3.0E-47 T 17-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BJD13_18655 e7397eef1f8a37199ebd92a3f285f038 616 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 161 174 3.0E-47 T 17-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BJD13_18655 e7397eef1f8a37199ebd92a3f285f038 616 Gene3D G3DSA:3.40.50.720 12 450 7.5E-175 T 17-10-2018 BJD13_18655 e7397eef1f8a37199ebd92a3f285f038 616 SUPERFAMILY SSF51735 4 208 3.35E-54 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_18655 e7397eef1f8a37199ebd92a3f285f038 616 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 207 501 2.2E-107 T 17-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BJD13_18655 e7397eef1f8a37199ebd92a3f285f038 616 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 13 205 8.3E-55 T 17-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BJD13_22330 b022d97a1978bba362e16b0ef3f01bd3 121 Gene3D G3DSA:1.10.4040.10 68 119 1.2E-10 T 17-10-2018 BJD13_22330 b022d97a1978bba362e16b0ef3f01bd3 121 Pfam PF03965 Penicillinase repressor 3 115 1.9E-35 T 17-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 BJD13_22330 b022d97a1978bba362e16b0ef3f01bd3 121 PIRSF PIRSF019455 1 121 9.1E-39 T 17-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 BJD13_22330 b022d97a1978bba362e16b0ef3f01bd3 121 Gene3D G3DSA:1.10.10.10 1 67 3.9E-21 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_22330 b022d97a1978bba362e16b0ef3f01bd3 121 SUPERFAMILY SSF46785 1 118 3.2E-29 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_13420 78068a25d193cd48d6b16b2e984fba56 447 Gene3D G3DSA:2.40.10.350 187 262 1.1E-30 T 17-10-2018 BJD13_13420 78068a25d193cd48d6b16b2e984fba56 447 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 18 276 2.4E-50 T 17-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 BJD13_13420 78068a25d193cd48d6b16b2e984fba56 447 Pfam PF04085 rod shape-determining protein MreC 133 274 2.5E-33 T 17-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 BJD13_13420 78068a25d193cd48d6b16b2e984fba56 447 Gene3D G3DSA:2.40.10.340 129 272 1.1E-30 T 17-10-2018 BJD13_00025 9ab4cd40e103cbcce054cbee47c02a5e 586 SUPERFAMILY SSF110849 5 106 2.79E-20 T 17-10-2018 IPR036086 ParB/Sulfiredoxin superfamily BJD13_00025 9ab4cd40e103cbcce054cbee47c02a5e 586 Pfam PF02195 ParB-like nuclease domain 13 102 8.9E-17 T 17-10-2018 IPR003115 ParB/Sulfiredoxin BJD13_00025 9ab4cd40e103cbcce054cbee47c02a5e 586 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 25 183 3.5E-29 T 17-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 BJD13_00025 9ab4cd40e103cbcce054cbee47c02a5e 586 SMART SM00470 12 103 1.0E-22 T 17-10-2018 IPR003115 ParB/Sulfiredoxin BJD13_00025 9ab4cd40e103cbcce054cbee47c02a5e 586 Gene3D G3DSA:1.10.10.2830 90 202 1.1E-15 T 17-10-2018 BJD13_00025 9ab4cd40e103cbcce054cbee47c02a5e 586 SUPERFAMILY SSF109709 97 201 4.58E-18 T 17-10-2018 BJD13_00025 9ab4cd40e103cbcce054cbee47c02a5e 586 TIGRFAM TIGR03734 PRTRC_parB: PRTRC system ParB family protein 22 579 4.8E-115 T 17-10-2018 IPR022396 ParB-related, ThiF-related cassette, ParB BJD13_00025 9ab4cd40e103cbcce054cbee47c02a5e 586 Gene3D G3DSA:3.90.1530.30 26 87 6.8E-17 T 17-10-2018 BJD13_20265 e4e906ad22645b5661d527e5666cbd41 260 Gene3D G3DSA:3.40.50.720 3 259 2.7E-78 T 17-10-2018 BJD13_20265 e4e906ad22645b5661d527e5666cbd41 260 SUPERFAMILY SSF51735 16 258 1.05E-77 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_20265 e4e906ad22645b5661d527e5666cbd41 260 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 147 175 - T 17-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BJD13_20265 e4e906ad22645b5661d527e5666cbd41 260 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 17 191 0.0015 T 17-10-2018 BJD13_20265 e4e906ad22645b5661d527e5666cbd41 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 2.2E-36 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_20265 e4e906ad22645b5661d527e5666cbd41 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 2.2E-36 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_20265 e4e906ad22645b5661d527e5666cbd41 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 89 100 2.2E-36 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_20265 e4e906ad22645b5661d527e5666cbd41 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 2.2E-36 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_20265 e4e906ad22645b5661d527e5666cbd41 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 18 35 2.2E-36 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_20265 e4e906ad22645b5661d527e5666cbd41 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 2.2E-36 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_20265 e4e906ad22645b5661d527e5666cbd41 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 25 258 5.5E-60 T 17-10-2018 BJD13_17285 6d2bddeb91bd87ac500f8f29e8299259 189 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 1.6E-14 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD13_17285 6d2bddeb91bd87ac500f8f29e8299259 189 Gene3D G3DSA:1.10.357.10 2 188 2.7E-57 T 17-10-2018 BJD13_17285 6d2bddeb91bd87ac500f8f29e8299259 189 SUPERFAMILY SSF46689 4 83 3.18E-15 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_17285 6d2bddeb91bd87ac500f8f29e8299259 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 3.2E-7 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD13_17285 6d2bddeb91bd87ac500f8f29e8299259 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 3.2E-7 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD13_17285 6d2bddeb91bd87ac500f8f29e8299259 189 SUPERFAMILY SSF48498 78 184 2.86E-22 T 17-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BJD13_08395 3c7e2a214c14429e40296126adefbb6d 456 SUPERFAMILY SSF51338 17 453 1.12E-10 T 17-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BJD13_08395 3c7e2a214c14429e40296126adefbb6d 456 TIGRFAM TIGR02022 hutF: formiminoglutamate deiminase 7 454 7.9E-214 T 17-10-2018 IPR010252 Formiminoglutamate deiminase BJD13_08395 3c7e2a214c14429e40296126adefbb6d 456 Gene3D G3DSA:2.30.40.10 14 434 3.2E-185 T 17-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BJD13_08395 3c7e2a214c14429e40296126adefbb6d 456 Pfam PF01979 Amidohydrolase family 51 430 1.8E-29 T 17-10-2018 IPR006680 Amidohydrolase-related GO:0016787 BJD13_08395 3c7e2a214c14429e40296126adefbb6d 456 Gene3D G3DSA:3.20.20.140 56 446 3.2E-185 T 17-10-2018 BJD13_08395 3c7e2a214c14429e40296126adefbb6d 456 SUPERFAMILY SSF51556 54 378 1.59E-70 T 17-10-2018 IPR032466 Metal-dependent hydrolase BJD13_02815 66aa72300bddead979b9cb12740d97ef 86 Gene3D G3DSA:1.10.287.1040 9 85 4.0E-24 T 17-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 BJD13_02815 66aa72300bddead979b9cb12740d97ef 86 SUPERFAMILY SSF116842 13 72 1.96E-18 T 17-10-2018 BJD13_02815 66aa72300bddead979b9cb12740d97ef 86 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 15 68 2.5E-22 T 17-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 BJD13_02815 66aa72300bddead979b9cb12740d97ef 86 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 28 56 4.0E-10 T 17-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 BJD13_02815 66aa72300bddead979b9cb12740d97ef 86 PIRSF PIRSF006488 1 84 3.9E-25 T 17-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 BJD13_02815 66aa72300bddead979b9cb12740d97ef 86 Pfam PF02609 Exonuclease VII small subunit 15 65 1.9E-19 T 17-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 BJD13_02815 66aa72300bddead979b9cb12740d97ef 86 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 14 74 15.826 T 17-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 BJD13_10285 6a39ef724591c496050933593036b77f 131 SUPERFAMILY SSF55874 26 128 2.33E-13 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_10285 6a39ef724591c496050933593036b77f 131 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 34 128 1.3E-7 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_10285 6a39ef724591c496050933593036b77f 131 SMART SM00387 33 131 0.0059 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_10285 6a39ef724591c496050933593036b77f 131 Gene3D G3DSA:3.30.565.10 5 130 1.1E-16 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_21575 83f4f5e4462b72de19338f301fea2d17 552 Gene3D G3DSA:3.50.30.30 262 403 1.3E-31 T 17-10-2018 BJD13_21575 83f4f5e4462b72de19338f301fea2d17 552 SUPERFAMILY SSF52025 305 383 3.01E-13 T 17-10-2018 BJD13_21575 83f4f5e4462b72de19338f301fea2d17 552 Pfam PF02225 PA domain 307 391 6.4E-16 T 17-10-2018 IPR003137 PA domain BJD13_14140 6768e8e83d62d0b82e0cae05ea518df8 306 Gene3D G3DSA:2.120.10.30 1 305 1.6E-123 T 17-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like BJD13_14140 6768e8e83d62d0b82e0cae05ea518df8 306 SUPERFAMILY SSF63829 30 303 3.27E-49 T 17-10-2018 BJD13_14140 6768e8e83d62d0b82e0cae05ea518df8 306 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 47 64 1.7E-8 T 17-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) BJD13_14140 6768e8e83d62d0b82e0cae05ea518df8 306 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 240 257 1.7E-8 T 17-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) BJD13_14140 6768e8e83d62d0b82e0cae05ea518df8 306 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 176 198 1.7E-8 T 17-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) BJD13_14140 6768e8e83d62d0b82e0cae05ea518df8 306 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 46 295 9.1E-44 T 17-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region BJD13_03870 8fa019b411d36517aed16a41e4d516d3 94 SUPERFAMILY SSF54862 6 72 3.07E-18 T 17-10-2018 BJD13_03870 8fa019b411d36517aed16a41e4d516d3 94 Gene3D G3DSA:3.30.70.20 2 81 1.4E-30 T 17-10-2018 BJD13_03870 8fa019b411d36517aed16a41e4d516d3 94 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 17-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BJD13_03870 8fa019b411d36517aed16a41e4d516d3 94 Pfam PF00037 4Fe-4S binding domain 5 25 4.4E-6 T 17-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BJD13_09115 ce2f0090603c2b52d7ca8e043f8b2827 474 Gene3D G3DSA:2.20.200.10 97 348 1.9E-131 T 17-10-2018 BJD13_09115 ce2f0090603c2b52d7ca8e043f8b2827 474 SUPERFAMILY SSF56954 2 460 1.31E-97 T 17-10-2018 BJD13_09115 ce2f0090603c2b52d7ca8e043f8b2827 474 Gene3D G3DSA:1.20.1600.10 50 458 1.9E-131 T 17-10-2018 BJD13_09115 ce2f0090603c2b52d7ca8e043f8b2827 474 Pfam PF02321 Outer membrane efflux protein 279 457 1.7E-22 T 17-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 BJD13_09115 ce2f0090603c2b52d7ca8e043f8b2827 474 Pfam PF02321 Outer membrane efflux protein 60 248 3.1E-24 T 17-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 BJD13_09115 ce2f0090603c2b52d7ca8e043f8b2827 474 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 10 458 1.3E-107 T 17-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 BJD13_23280 43d11deae0abd9ecfda8edfa9ca346c6 878 Gene3D G3DSA:2.40.170.20 240 878 1.1E-50 T 17-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BJD13_23280 43d11deae0abd9ecfda8edfa9ca346c6 878 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 162 1.5E-15 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_23280 43d11deae0abd9ecfda8edfa9ca346c6 878 SUPERFAMILY SSF56935 20 878 1.47E-90 T 17-10-2018 BJD13_23280 43d11deae0abd9ecfda8edfa9ca346c6 878 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 33 878 2.6E-171 T 17-10-2018 IPR010104 Bacterial TonB-dependent receptor BJD13_23280 43d11deae0abd9ecfda8edfa9ca346c6 878 Gene3D G3DSA:2.170.130.10 24 167 1.9E-14 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_23280 43d11deae0abd9ecfda8edfa9ca346c6 878 Pfam PF00593 TonB dependent receptor 408 874 7.4E-31 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_04180 19f2505efb85a2c254e8e23b35fcd417 454 Gene3D G3DSA:3.40.605.10 8 446 1.7E-149 T 17-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 BJD13_04180 19f2505efb85a2c254e8e23b35fcd417 454 Pfam PF00171 Aldehyde dehydrogenase family 3 451 4.2E-138 T 17-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 BJD13_04180 19f2505efb85a2c254e8e23b35fcd417 454 SUPERFAMILY SSF53720 3 453 2.09E-139 T 17-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BJD13_04180 19f2505efb85a2c254e8e23b35fcd417 454 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 255 266 - T 17-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 BJD13_04180 19f2505efb85a2c254e8e23b35fcd417 454 Gene3D G3DSA:3.40.309.10 231 420 1.7E-149 T 17-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 BJD13_07995 0f48119e29cd8d970890c889ebdc01e1 264 SUPERFAMILY SSF53448 5 225 3.47E-53 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD13_07995 0f48119e29cd8d970890c889ebdc01e1 264 Gene3D G3DSA:3.90.550.10 1 230 2.6E-65 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD13_07995 0f48119e29cd8d970890c889ebdc01e1 264 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 4 227 40.506 T 17-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 BJD13_07995 0f48119e29cd8d970890c889ebdc01e1 264 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 6 226 1.8E-70 T 17-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 BJD13_07995 0f48119e29cd8d970890c889ebdc01e1 264 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 103 110 - T 17-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 BJD13_07995 0f48119e29cd8d970890c889ebdc01e1 264 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 6 227 6.1E-61 T 17-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 BJD13_23305 d128bb8c193bfa907b0482162454a8c4 372 SUPERFAMILY SSF102114 6 313 3.4E-68 T 17-10-2018 BJD13_23305 d128bb8c193bfa907b0482162454a8c4 372 Pfam PF04055 Radical SAM superfamily 13 158 3.6E-17 T 17-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BJD13_23305 d128bb8c193bfa907b0482162454a8c4 372 Pfam PF13186 Iron-sulfur cluster-binding domain 238 304 8.4E-12 T 17-10-2018 IPR023885 4Fe4S-binding SPASM domain BJD13_23305 d128bb8c193bfa907b0482162454a8c4 372 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 241 325 2.3E-9 T 17-10-2018 IPR023885 4Fe4S-binding SPASM domain BJD13_23305 d128bb8c193bfa907b0482162454a8c4 372 Pfam PF13353 4Fe-4S single cluster domain 14 91 3.5E-5 T 17-10-2018 BJD13_23305 d128bb8c193bfa907b0482162454a8c4 372 PIRSF PIRSF037420 1 352 9.4E-120 T 17-10-2018 IPR017200 Coenzyme PQQ synthesis protein E BJD13_23305 d128bb8c193bfa907b0482162454a8c4 372 Gene3D G3DSA:3.20.20.70 4 289 2.9E-41 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD13_23305 d128bb8c193bfa907b0482162454a8c4 372 TIGRFAM TIGR02109 PQQ_syn_pqqE: coenzyme PQQ biosynthesis enzyme PqqE 5 358 3.1E-160 T 17-10-2018 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 BJD13_23305 d128bb8c193bfa907b0482162454a8c4 372 Hamap MF_00660 Coenzyme PQQ synthesis protein E [pqqE]. 1 370 174.607 T 17-10-2018 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 BJD13_09820 90672c0f63689f73c3a07b77b44dbaa6 84 Gene3D G3DSA:1.10.10.1130 1 79 1.5E-29 T 17-10-2018 BJD13_09820 90672c0f63689f73c3a07b77b44dbaa6 84 Pfam PF10982 Protein of unknown function (DUF2789) 1 75 3.1E-30 T 17-10-2018 IPR021250 Protein of unknown function DUF2789 BJD13_17220 834dc189f93eb73b1e1fd26aea3da3ef 791 Pfam PF13538 UvrD-like helicase C-terminal domain 688 734 6.7E-15 T 17-10-2018 IPR027785 UvrD-like helicase C-terminal domain BJD13_17220 834dc189f93eb73b1e1fd26aea3da3ef 791 Gene3D G3DSA:3.40.50.300 478 584 1.9E-10 T 17-10-2018 BJD13_17220 834dc189f93eb73b1e1fd26aea3da3ef 791 Gene3D G3DSA:3.40.50.300 662 748 2.7E-22 T 17-10-2018 BJD13_17220 834dc189f93eb73b1e1fd26aea3da3ef 791 SUPERFAMILY SSF52540 386 758 1.15E-46 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_17220 834dc189f93eb73b1e1fd26aea3da3ef 791 Pfam PF13245 AAA domain 205 409 1.5E-28 T 17-10-2018 BJD13_17220 834dc189f93eb73b1e1fd26aea3da3ef 791 SUPERFAMILY SSF52540 7 441 2.68E-36 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_17220 834dc189f93eb73b1e1fd26aea3da3ef 791 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 16 757 43.953 T 17-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 BJD13_17220 834dc189f93eb73b1e1fd26aea3da3ef 791 Gene3D G3DSA:1.10.10.1020 1 116 1.2E-8 T 17-10-2018 BJD13_16825 d03ec63c5b7342c26339a919d65c408d 352 Pfam PF00107 Zinc-binding dehydrogenase 186 309 2.2E-25 T 17-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 BJD13_16825 d03ec63c5b7342c26339a919d65c408d 352 SUPERFAMILY SSF51735 151 313 2.02E-43 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_16825 d03ec63c5b7342c26339a919d65c408d 352 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 144 1.2E-26 T 17-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 BJD13_16825 d03ec63c5b7342c26339a919d65c408d 352 Gene3D G3DSA:3.90.180.10 13 343 3.0E-137 T 17-10-2018 BJD13_16825 d03ec63c5b7342c26339a919d65c408d 352 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 17-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 BJD13_16825 d03ec63c5b7342c26339a919d65c408d 352 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 179 207 - T 17-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 BJD13_16825 d03ec63c5b7342c26339a919d65c408d 352 SUPERFAMILY SSF50129 9 172 1.52E-47 T 17-10-2018 IPR011032 GroES-like superfamily BJD13_16825 d03ec63c5b7342c26339a919d65c408d 352 SMART SM00829 11 343 9.0E-6 T 17-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 BJD13_16825 d03ec63c5b7342c26339a919d65c408d 352 Gene3D G3DSA:3.40.50.720 160 315 3.0E-137 T 17-10-2018 BJD13_12260 1b8ada5d72b71a14656458b3b81d8bec 146 Gene3D G3DSA:1.10.286.20 10 51 3.3E-7 T 17-10-2018 BJD13_12260 1b8ada5d72b71a14656458b3b81d8bec 146 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 57 132 7.9E-22 T 17-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 BJD13_12260 1b8ada5d72b71a14656458b3b81d8bec 146 Gene3D G3DSA:3.10.50.30 52 145 2.3E-31 T 17-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 BJD13_12260 1b8ada5d72b71a14656458b3b81d8bec 146 PIRSF PIRSF006092 34 135 1.4E-26 T 17-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 BJD13_12260 1b8ada5d72b71a14656458b3b81d8bec 146 SUPERFAMILY SSF54534 56 131 8.76E-19 T 17-10-2018 BJD13_12260 1b8ada5d72b71a14656458b3b81d8bec 146 Pfam PF14760 Rnk N-terminus 11 50 1.3E-12 T 17-10-2018 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain BJD13_10615 dc2177c734220da1a04279d5b6ff3e44 954 Gene3D G3DSA:3.40.640.10 520 746 3.1E-61 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD13_10615 dc2177c734220da1a04279d5b6ff3e44 954 Gene3D G3DSA:3.40.640.10 98 356 3.3E-106 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD13_10615 dc2177c734220da1a04279d5b6ff3e44 954 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 11 948 25.679 T 17-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 BJD13_10615 dc2177c734220da1a04279d5b6ff3e44 954 Gene3D G3DSA:3.90.1150.10 756 896 4.7E-40 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD13_10615 dc2177c734220da1a04279d5b6ff3e44 954 SUPERFAMILY SSF53383 471 943 6.66E-103 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD13_10615 dc2177c734220da1a04279d5b6ff3e44 954 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 20 942 0.0 T 17-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 BJD13_10615 dc2177c734220da1a04279d5b6ff3e44 954 SUPERFAMILY SSF53383 20 439 8.87E-102 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD13_10615 dc2177c734220da1a04279d5b6ff3e44 954 Pfam PF02347 Glycine cleavage system P-protein 446 732 1.4E-12 T 17-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 BJD13_10615 dc2177c734220da1a04279d5b6ff3e44 954 Pfam PF02347 Glycine cleavage system P-protein 19 440 1.5E-176 T 17-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 BJD13_01500 cf2db13189151aac00b1c0cda9701474 77 Pfam PF05101 Type IV secretory pathway, VirB3-like protein 2 73 9.8E-11 T 17-10-2018 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB BJD13_16045 4eb60af9f35816a4750ef7e6df5d4547 265 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 2 260 15.762 T 17-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 BJD13_16045 4eb60af9f35816a4750ef7e6df5d4547 265 Pfam PF02673 Bacitracin resistance protein BacA 7 254 4.5E-67 T 17-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 BJD13_15300 611d2bd5b45e91d525a424a2c8fb60fe 120 Pfam PF01124 MAPEG family 3 109 9.8E-8 T 17-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein BJD13_15300 611d2bd5b45e91d525a424a2c8fb60fe 120 SUPERFAMILY SSF161084 11 115 4.97E-11 T 17-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily BJD13_15300 611d2bd5b45e91d525a424a2c8fb60fe 120 Gene3D G3DSA:1.20.120.550 1 119 7.7E-13 T 17-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily BJD13_09190 42d7526099947b2a5210263a3fddf34e 853 Gene3D G3DSA:3.10.620.30 259 396 2.4E-32 T 17-10-2018 BJD13_09190 42d7526099947b2a5210263a3fddf34e 853 Pfam PF12969 Domain of Unknown Function with PDB structure (DUF3857) 61 221 1.2E-24 T 17-10-2018 IPR024618 Domain of unknown function DUF3857 BJD13_09190 42d7526099947b2a5210263a3fddf34e 853 Gene3D G3DSA:2.60.40.3140 55 243 3.9E-11 T 17-10-2018 BJD13_09190 42d7526099947b2a5210263a3fddf34e 853 Pfam PF01841 Transglutaminase-like superfamily 276 350 1.2E-6 T 17-10-2018 IPR002931 Transglutaminase-like BJD13_09190 42d7526099947b2a5210263a3fddf34e 853 SUPERFAMILY SSF54001 270 392 1.19E-10 T 17-10-2018 IPR038765 Papain-like cysteine peptidase superfamily BJD13_12945 986721ef990d3c6291c9eda9f32cc33c 597 PIRSF PIRSF001294 1 596 1.4E-229 T 17-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 BJD13_12945 986721ef990d3c6291c9eda9f32cc33c 597 Pfam PF03814 Potassium-transporting ATPase A subunit 6 592 3.5E-212 T 17-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 BJD13_12945 986721ef990d3c6291c9eda9f32cc33c 597 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 202 594 6.7E-120 T 17-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 BJD13_12945 986721ef990d3c6291c9eda9f32cc33c 597 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 1 594 27.555 T 17-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 BJD13_03425 31052f4292d66adaa115a5aa5e2bac43 263 Gene3D G3DSA:1.10.101.10 39 122 2.8E-20 T 17-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 BJD13_03425 31052f4292d66adaa115a5aa5e2bac43 263 Pfam PF01471 Putative peptidoglycan binding domain 51 112 4.7E-15 T 17-10-2018 IPR002477 Peptidoglycan binding-like BJD13_03425 31052f4292d66adaa115a5aa5e2bac43 263 SUPERFAMILY SSF47090 44 113 1.7E-17 T 17-10-2018 IPR036365 PGBD-like superfamily BJD13_04905 df2c3f277ab4e7ab89b585ac5b3153a1 41 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 40 7.4E-9 T 17-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_04905 df2c3f277ab4e7ab89b585ac5b3153a1 41 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 17-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_04905 df2c3f277ab4e7ab89b585ac5b3153a1 41 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 17.227 T 17-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_04905 df2c3f277ab4e7ab89b585ac5b3153a1 41 SUPERFAMILY SSF57840 1 40 8.24E-14 T 17-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_04905 df2c3f277ab4e7ab89b585ac5b3153a1 41 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 17 40 0.006 T 17-10-2018 BJD13_04905 df2c3f277ab4e7ab89b585ac5b3153a1 41 Pfam PF00444 Ribosomal protein L36 1 40 2.1E-17 T 17-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_11630 cea85107f75f03bf16b44f953b6155b1 214 Gene3D G3DSA:3.40.50.1240 1 212 2.0E-58 T 17-10-2018 IPR029033 Histidine phosphatase superfamily BJD13_11630 cea85107f75f03bf16b44f953b6155b1 214 PIRSF PIRSF000709 1 184 4.0E-13 T 17-10-2018 BJD13_11630 cea85107f75f03bf16b44f953b6155b1 214 SUPERFAMILY SSF53254 1 203 4.71E-54 T 17-10-2018 IPR029033 Histidine phosphatase superfamily BJD13_11630 cea85107f75f03bf16b44f953b6155b1 214 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 198 9.0E-57 T 17-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 BJD13_11630 cea85107f75f03bf16b44f953b6155b1 214 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 5 14 - T 17-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 BJD13_11630 cea85107f75f03bf16b44f953b6155b1 214 SMART SM00855 2 158 1.1E-21 T 17-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 BJD13_15500 6f2a91e54511a61f1ff16f5974f7ae45 486 Pfam PF01425 Amidase 64 464 1.7E-79 T 17-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 BJD13_15500 6f2a91e54511a61f1ff16f5974f7ae45 486 SUPERFAMILY SSF75304 46 473 1.83E-110 T 17-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 BJD13_15500 6f2a91e54511a61f1ff16f5974f7ae45 486 TIGRFAM TIGR02715 amido_AtzE: amidohydrolase, AtzE family 44 478 2.2E-191 T 17-10-2018 IPR014087 Amidohydrolase, AtzE type KEGG: 00791+3.5.1.84|MetaCyc: PWY-5169 BJD13_15500 6f2a91e54511a61f1ff16f5974f7ae45 486 Gene3D G3DSA:3.90.1300.10 44 475 1.1E-120 T 17-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 BJD13_04825 68bfaaa03e87cc6e878249b2ccfca3cb 301 Pfam PF02616 Segregation and condensation protein ScpA 64 274 9.9E-29 T 17-10-2018 IPR003768 Segregation and condensation protein A BJD13_04825 68bfaaa03e87cc6e878249b2ccfca3cb 301 Hamap MF_01805 Segregation and condensation protein A [scpA]. 47 277 21.946 T 17-10-2018 IPR003768 Segregation and condensation protein A BJD13_00145 f69b74d7513dde7bb053fd33ef5d6784 204 Pfam PF00436 Single-strand binding protein family 3 86 1.6E-5 T 17-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 BJD13_00145 f69b74d7513dde7bb053fd33ef5d6784 204 Gene3D G3DSA:2.40.50.140 1 119 2.8E-9 T 17-10-2018 BJD13_00145 f69b74d7513dde7bb053fd33ef5d6784 204 SUPERFAMILY SSF50249 1 172 1.41E-8 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD13_15270 cf38ae79bf4e3c7c20b0caa06a3468a9 143 Gene3D G3DSA:3.30.530.20 5 142 4.4E-26 T 17-10-2018 IPR023393 START-like domain superfamily BJD13_15270 cf38ae79bf4e3c7c20b0caa06a3468a9 143 SUPERFAMILY SSF55961 10 141 1.77E-18 T 17-10-2018 BJD13_15270 cf38ae79bf4e3c7c20b0caa06a3468a9 143 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 12 122 5.3E-16 T 17-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like BJD13_13185 cae9c6ae9f98552f5edeadd6eec07f94 329 SUPERFAMILY SSF158544 106 216 9.68E-29 T 17-10-2018 IPR038072 GspK, central domain superfamily BJD13_13185 cae9c6ae9f98552f5edeadd6eec07f94 329 Gene3D G3DSA:1.10.40.60 104 219 2.3E-70 T 17-10-2018 IPR038072 GspK, central domain superfamily BJD13_13185 cae9c6ae9f98552f5edeadd6eec07f94 329 Gene3D G3DSA:3.30.1300.30 46 312 2.3E-70 T 17-10-2018 BJD13_13185 cae9c6ae9f98552f5edeadd6eec07f94 329 Pfam PF03934 Type II secretion system (T2SS), protein K 36 318 7.4E-81 T 17-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 BJD13_13185 cae9c6ae9f98552f5edeadd6eec07f94 329 PIRSF PIRSF002786 5 329 1.7E-70 T 17-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 BJD13_13185 cae9c6ae9f98552f5edeadd6eec07f94 329 Gene3D G3DSA:1.10.40.60 220 287 2.3E-70 T 17-10-2018 IPR038072 GspK, central domain superfamily BJD13_13185 cae9c6ae9f98552f5edeadd6eec07f94 329 SUPERFAMILY SSF158544 220 284 1.99E-15 T 17-10-2018 IPR038072 GspK, central domain superfamily BJD13_13185 cae9c6ae9f98552f5edeadd6eec07f94 329 SUPERFAMILY SSF54523 40 325 3.3E-17 T 17-10-2018 BJD13_08155 298cf44a12f0b44f48cf4378791a0764 370 Gene3D G3DSA:3.40.640.10 1 248 6.8E-83 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD13_08155 298cf44a12f0b44f48cf4378791a0764 370 SUPERFAMILY SSF53383 16 366 4.35E-98 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD13_08155 298cf44a12f0b44f48cf4378791a0764 370 Gene3D G3DSA:3.90.1150.10 250 368 4.5E-33 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD13_08155 298cf44a12f0b44f48cf4378791a0764 370 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 17 362 2.3E-115 T 17-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase BJD13_08155 298cf44a12f0b44f48cf4378791a0764 370 PIRSF PIRSF000390 4 369 1.0E-97 T 17-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase BJD13_17250 fef85b2d23cd20345e79abf16e691673 641 Gene3D G3DSA:2.30.42.10 523 617 5.2E-7 T 17-10-2018 BJD13_17250 fef85b2d23cd20345e79abf16e691673 641 Pfam PF05299 M61 glycyl aminopeptidase 319 434 5.5E-26 T 17-10-2018 IPR007963 Peptidase M61, catalytic domain BJD13_17250 fef85b2d23cd20345e79abf16e691673 641 SUPERFAMILY SSF50156 540 613 1.28E-7 T 17-10-2018 IPR036034 PDZ superfamily GO:0005515 BJD13_17250 fef85b2d23cd20345e79abf16e691673 641 SUPERFAMILY SSF55486 260 498 3.48E-7 T 17-10-2018 BJD13_17250 fef85b2d23cd20345e79abf16e691673 641 PIRSF PIRSF016493 54 641 3.9E-142 T 17-10-2018 IPR024191 Peptidase M61 BJD13_17250 fef85b2d23cd20345e79abf16e691673 641 Gene3D G3DSA:1.10.390.60 238 501 2.0E-51 T 17-10-2018 BJD13_05200 43106d5046d16e9be90572e61929bda1 787 Pfam PF12836 Helix-hairpin-helix motif 495 559 1.5E-27 T 17-10-2018 BJD13_05200 43106d5046d16e9be90572e61929bda1 787 SUPERFAMILY SSF53098 325 473 6.3E-51 T 17-10-2018 IPR012337 Ribonuclease H-like superfamily BJD13_05200 43106d5046d16e9be90572e61929bda1 787 Gene3D G3DSA:1.10.150.310 503 634 1.4E-48 T 17-10-2018 BJD13_05200 43106d5046d16e9be90572e61929bda1 787 SUPERFAMILY SSF158832 6 324 4.45E-113 T 17-10-2018 BJD13_05200 43106d5046d16e9be90572e61929bda1 787 SUPERFAMILY SSF50249 641 730 1.27E-24 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD13_05200 43106d5046d16e9be90572e61929bda1 787 Pfam PF09371 Tex-like protein N-terminal domain 14 197 4.1E-66 T 17-10-2018 IPR018974 Tex-like protein, N-terminal BJD13_05200 43106d5046d16e9be90572e61929bda1 787 Gene3D G3DSA:1.10.10.650 3 114 5.3E-39 T 17-10-2018 IPR023319 Tex-like protein, HTH domain superfamily BJD13_05200 43106d5046d16e9be90572e61929bda1 787 SUPERFAMILY SSF47781 564 636 4.0E-19 T 17-10-2018 IPR010994 RuvA domain 2-like BJD13_05200 43106d5046d16e9be90572e61929bda1 787 SMART SM00732 329 428 3.8E-35 T 17-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 BJD13_05200 43106d5046d16e9be90572e61929bda1 787 Gene3D G3DSA:1.10.3500.10 117 500 1.9E-148 T 17-10-2018 IPR023323 Tex-like domain superfamily BJD13_05200 43106d5046d16e9be90572e61929bda1 787 Gene3D G3DSA:2.40.50.140 635 729 3.2E-28 T 17-10-2018 BJD13_05200 43106d5046d16e9be90572e61929bda1 787 SUPERFAMILY SSF47781 474 561 1.56E-26 T 17-10-2018 IPR010994 RuvA domain 2-like BJD13_05200 43106d5046d16e9be90572e61929bda1 787 Pfam PF00575 S1 RNA binding domain 653 724 1.3E-20 T 17-10-2018 IPR003029 S1 domain GO:0003676 BJD13_05200 43106d5046d16e9be90572e61929bda1 787 SMART SM00316 653 724 3.7E-25 T 17-10-2018 IPR022967 RNA-binding domain, S1 BJD13_05200 43106d5046d16e9be90572e61929bda1 787 Gene3D G3DSA:3.30.420.140 328 455 1.9E-148 T 17-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 BJD13_05200 43106d5046d16e9be90572e61929bda1 787 Pfam PF16921 Tex protein YqgF-like domain 329 455 2.2E-54 T 17-10-2018 IPR032639 Tex protein, YqgF-like domain BJD13_09380 6feaedcc5e09323115adf8993c779a18 804 PIRSF PIRSF001227 4 803 1.6E-139 T 17-10-2018 IPR014395 Penicillin/GL-7-ACA/AHL acylase GO:0016811 BJD13_09380 6feaedcc5e09323115adf8993c779a18 804 Gene3D G3DSA:2.30.120.10 333 392 3.6E-110 T 17-10-2018 BJD13_09380 6feaedcc5e09323115adf8993c779a18 804 Gene3D G3DSA:1.10.1400.10 563 701 3.6E-110 T 17-10-2018 BJD13_09380 6feaedcc5e09323115adf8993c779a18 804 Gene3D G3DSA:3.60.20.10 254 785 3.6E-110 T 17-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BJD13_09380 6feaedcc5e09323115adf8993c779a18 804 Pfam PF01804 Penicillin amidase 46 791 6.8E-125 T 17-10-2018 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase GO:0016787|GO:0017000 BJD13_09380 6feaedcc5e09323115adf8993c779a18 804 Gene3D G3DSA:1.10.439.10 19 177 1.8E-43 T 17-10-2018 IPR023343 Penicillin amidase type, domain 1 GO:0016811 BJD13_09380 6feaedcc5e09323115adf8993c779a18 804 SUPERFAMILY SSF56235 42 803 4.63E-162 T 17-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BJD13_06330 217e6b6bc0dfe238f8090e195c266d74 152 ProSitePatterns PS00893 Nudix box signature. 42 63 - T 17-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 BJD13_06330 217e6b6bc0dfe238f8090e195c266d74 152 SUPERFAMILY SSF55811 7 145 2.17E-29 T 17-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BJD13_06330 217e6b6bc0dfe238f8090e195c266d74 152 Pfam PF00293 NUDIX domain 12 120 8.2E-15 T 17-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 BJD13_06330 217e6b6bc0dfe238f8090e195c266d74 152 Gene3D G3DSA:3.90.79.10 5 152 1.7E-38 T 17-10-2018 BJD13_23080 9cd2330f59561ae77a155aa467a1db13 412 Pfam PF07690 Major Facilitator Superfamily 7 181 1.8E-8 T 17-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD13_23080 9cd2330f59561ae77a155aa467a1db13 412 Pfam PF07690 Major Facilitator Superfamily 201 381 7.8E-13 T 17-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD13_23080 9cd2330f59561ae77a155aa467a1db13 412 Gene3D G3DSA:1.20.1250.20 198 379 4.7E-16 T 17-10-2018 BJD13_23080 9cd2330f59561ae77a155aa467a1db13 412 SUPERFAMILY SSF103473 3 380 3.53E-37 T 17-10-2018 IPR036259 MFS transporter superfamily BJD13_23080 9cd2330f59561ae77a155aa467a1db13 412 Gene3D G3DSA:1.20.1250.20 1 188 1.2E-11 T 17-10-2018 BJD13_23685 e41ec4371a2e4e848f43d55f7f398478 214 Pfam PF03006 Haemolysin-III related 12 206 2.3E-36 T 17-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 BJD13_23685 e41ec4371a2e4e848f43d55f7f398478 214 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 14 211 9.4E-64 T 17-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 BJD13_07605 1b142c6a72fe90c5a8969d0177ef3f34 520 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 39 439 5.8E-106 T 17-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 BJD13_07605 1b142c6a72fe90c5a8969d0177ef3f34 520 Gene3D G3DSA:1.20.1730.10 28 520 4.0E-164 T 17-10-2018 IPR038377 Sodium/glucose symporter superfamily BJD13_07605 1b142c6a72fe90c5a8969d0177ef3f34 520 Pfam PF00474 Sodium:solute symporter family 39 439 3.1E-70 T 17-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 BJD13_23990 b76ca1b625cd782d6304d1010d0ae506 365 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 41 264 2.6E-37 T 17-10-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 BJD13_09495 d3da265f848d7ee2fd84e09761fbe433 448 SUPERFAMILY SSF50156 222 306 5.92E-14 T 17-10-2018 IPR036034 PDZ superfamily GO:0005515 BJD13_09495 d3da265f848d7ee2fd84e09761fbe433 448 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 12 445 2.1E-101 T 17-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 BJD13_09495 d3da265f848d7ee2fd84e09761fbe433 448 Gene3D G3DSA:2.30.42.10 133 216 7.5E-8 T 17-10-2018 BJD13_09495 d3da265f848d7ee2fd84e09761fbe433 448 SMART SM00228 211 279 1.2E-4 T 17-10-2018 IPR001478 PDZ domain GO:0005515 BJD13_09495 d3da265f848d7ee2fd84e09761fbe433 448 SMART SM00228 107 185 5.1 T 17-10-2018 IPR001478 PDZ domain GO:0005515 BJD13_09495 d3da265f848d7ee2fd84e09761fbe433 448 SUPERFAMILY SSF50156 89 174 6.05E-10 T 17-10-2018 IPR036034 PDZ superfamily GO:0005515 BJD13_09495 d3da265f848d7ee2fd84e09761fbe433 448 Pfam PF02163 Peptidase family M50 11 432 2.6E-78 T 17-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 BJD13_09495 d3da265f848d7ee2fd84e09761fbe433 448 Gene3D G3DSA:2.30.42.10 221 304 4.4E-14 T 17-10-2018 BJD13_00295 aa65872c3c27de79de9e5cd9d557afce 399 SUPERFAMILY SSF56954 2 392 2.62E-48 T 17-10-2018 BJD13_00295 aa65872c3c27de79de9e5cd9d557afce 399 Gene3D G3DSA:1.20.1600.10 4 395 5.0E-43 T 17-10-2018 BJD13_00295 aa65872c3c27de79de9e5cd9d557afce 399 Pfam PF02321 Outer membrane efflux protein 212 392 5.0E-13 T 17-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 BJD13_00295 aa65872c3c27de79de9e5cd9d557afce 399 Pfam PF02321 Outer membrane efflux protein 5 188 8.4E-13 T 17-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 BJD13_20245 9f95b614b9b3090fa227c8f33a819aa4 233 Gene3D G3DSA:3.40.50.150 1 232 1.6E-47 T 17-10-2018 BJD13_20245 9f95b614b9b3090fa227c8f33a819aa4 233 Pfam PF01555 DNA methylase 165 226 4.0E-14 T 17-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 BJD13_20245 9f95b614b9b3090fa227c8f33a819aa4 233 Pfam PF01555 DNA methylase 23 145 1.6E-11 T 17-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 BJD13_20245 9f95b614b9b3090fa227c8f33a819aa4 233 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 25 31 - T 17-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 BJD13_20245 9f95b614b9b3090fa227c8f33a819aa4 233 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 188 206 2.2E-22 T 17-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 BJD13_20245 9f95b614b9b3090fa227c8f33a819aa4 233 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 21 35 2.2E-22 T 17-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 BJD13_20245 9f95b614b9b3090fa227c8f33a819aa4 233 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 211 231 2.2E-22 T 17-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 BJD13_20245 9f95b614b9b3090fa227c8f33a819aa4 233 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 75 95 2.2E-22 T 17-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 BJD13_20245 9f95b614b9b3090fa227c8f33a819aa4 233 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 170 187 2.2E-22 T 17-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 BJD13_20245 9f95b614b9b3090fa227c8f33a819aa4 233 SUPERFAMILY SSF53335 2 231 5.84E-51 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_10825 37075e43833872228eb230c58fc3b0f8 300 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 62 297 2.1E-60 T 17-10-2018 BJD13_10825 37075e43833872228eb230c58fc3b0f8 300 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 205 224 1.9E-9 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_10825 37075e43833872228eb230c58fc3b0f8 300 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 185 193 1.9E-9 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_10825 37075e43833872228eb230c58fc3b0f8 300 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 144 1.9E-9 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_10825 37075e43833872228eb230c58fc3b0f8 300 SUPERFAMILY SSF51735 54 298 1.09E-79 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_10825 37075e43833872228eb230c58fc3b0f8 300 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 192 220 - T 17-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BJD13_10825 37075e43833872228eb230c58fc3b0f8 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 224 2.0E-33 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_10825 37075e43833872228eb230c58fc3b0f8 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 144 2.0E-33 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_10825 37075e43833872228eb230c58fc3b0f8 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 261 281 2.0E-33 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_10825 37075e43833872228eb230c58fc3b0f8 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 226 243 2.0E-33 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_10825 37075e43833872228eb230c58fc3b0f8 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 57 74 2.0E-33 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_10825 37075e43833872228eb230c58fc3b0f8 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 195 2.0E-33 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_10825 37075e43833872228eb230c58fc3b0f8 300 Gene3D G3DSA:3.40.50.720 8 297 2.8E-92 T 17-10-2018 BJD13_22025 d50f550e07cb6c6afa212aa758a2ac24 535 SUPERFAMILY SSF51905 52 526 7.77E-54 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_22025 d50f550e07cb6c6afa212aa758a2ac24 535 Gene3D G3DSA:1.20.1440.240 170 275 1.2E-172 T 17-10-2018 BJD13_22025 d50f550e07cb6c6afa212aa758a2ac24 535 Pfam PF01593 Flavin containing amine oxidoreductase 64 524 2.1E-64 T 17-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 BJD13_22025 d50f550e07cb6c6afa212aa758a2ac24 535 SUPERFAMILY SSF54373 365 475 3.34E-31 T 17-10-2018 BJD13_22025 d50f550e07cb6c6afa212aa758a2ac24 535 Gene3D G3DSA:3.50.50.60 56 521 1.2E-172 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_22025 d50f550e07cb6c6afa212aa758a2ac24 535 Gene3D G3DSA:3.90.660.10 94 470 1.2E-172 T 17-10-2018 BJD13_12870 9e243de7e6e6293b6d32b0ae283a2c90 148 SUPERFAMILY SSF89447 2 136 8.97E-36 T 17-10-2018 IPR037914 SpoVT-AbrB domain superfamily BJD13_12870 9e243de7e6e6293b6d32b0ae283a2c90 148 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 2 146 4.3E-29 T 17-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 BJD13_12870 9e243de7e6e6293b6d32b0ae283a2c90 148 Pfam PF02381 MraZ protein, putative antitoxin-like 2 75 2.9E-8 T 17-10-2018 IPR020603 MraZ domain BJD13_12870 9e243de7e6e6293b6d32b0ae283a2c90 148 Pfam PF02381 MraZ protein, putative antitoxin-like 85 133 2.9E-12 T 17-10-2018 IPR020603 MraZ domain BJD13_12870 9e243de7e6e6293b6d32b0ae283a2c90 148 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 148 40.872 T 17-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 BJD13_12870 9e243de7e6e6293b6d32b0ae283a2c90 148 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 125 6.0E-69 T 17-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 BJD13_12870 9e243de7e6e6293b6d32b0ae283a2c90 148 Gene3D G3DSA:2.40.330.20 1 145 6.2E-34 T 17-10-2018 IPR038619 MraZ superfamily BJD13_11335 8a800948a7a0343b5913f912a5bc2137 81 Pfam PF02597 ThiS family 7 81 7.8E-17 T 17-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 BJD13_11335 8a800948a7a0343b5913f912a5bc2137 81 SUPERFAMILY SSF54285 5 81 6.73E-17 T 17-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp BJD13_11335 8a800948a7a0343b5913f912a5bc2137 81 Gene3D G3DSA:3.10.20.30 4 81 2.9E-19 T 17-10-2018 IPR012675 Beta-grasp domain superfamily BJD13_11335 8a800948a7a0343b5913f912a5bc2137 81 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 5 81 6.2E-19 T 17-10-2018 BJD13_10945 53380800785f82b9a60c7de15bb8fbca 375 SMART SM00244 63 223 1.1E-34 T 17-10-2018 IPR001107 Band 7 domain BJD13_10945 53380800785f82b9a60c7de15bb8fbca 375 SUPERFAMILY SSF117892 96 230 4.32E-20 T 17-10-2018 IPR036013 Band 7/SPFH domain superfamily BJD13_10945 53380800785f82b9a60c7de15bb8fbca 375 Pfam PF01145 SPFH domain / Band 7 family 68 239 5.3E-31 T 17-10-2018 IPR001107 Band 7 domain BJD13_10945 53380800785f82b9a60c7de15bb8fbca 375 PRINTS PR00721 Stomatin signature 153 170 1.4E-10 T 17-10-2018 IPR001972 Stomatin family GO:0016020 BJD13_10945 53380800785f82b9a60c7de15bb8fbca 375 PRINTS PR00721 Stomatin signature 199 217 1.4E-10 T 17-10-2018 IPR001972 Stomatin family GO:0016020 BJD13_10945 53380800785f82b9a60c7de15bb8fbca 375 PRINTS PR00721 Stomatin signature 118 139 1.4E-10 T 17-10-2018 IPR001972 Stomatin family GO:0016020 BJD13_10945 53380800785f82b9a60c7de15bb8fbca 375 PRINTS PR00721 Stomatin signature 70 92 1.4E-10 T 17-10-2018 IPR001972 Stomatin family GO:0016020 BJD13_10945 53380800785f82b9a60c7de15bb8fbca 375 TIGRFAM TIGR01933 hflK: HflK protein 65 321 8.6E-100 T 17-10-2018 IPR010201 HflK GO:0016021 BJD13_10945 53380800785f82b9a60c7de15bb8fbca 375 Gene3D G3DSA:3.30.479.30 94 225 5.3E-19 T 17-10-2018 BJD13_21605 e42fce947556fafb486fcf93db87cd08 271 Gene3D G3DSA:2.60.120.180 44 268 7.5E-47 T 17-10-2018 IPR013319 Glycoside hydrolase family 11/12 GO:0004553 MetaCyc: PWY-6717|MetaCyc: PWY-6784 BJD13_21605 e42fce947556fafb486fcf93db87cd08 271 SUPERFAMILY SSF49899 43 265 8.59E-52 T 17-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily BJD13_21605 e42fce947556fafb486fcf93db87cd08 271 Pfam PF01670 Glycosyl hydrolase family 12 90 260 8.1E-18 T 17-10-2018 IPR002594 Glycoside hydrolase family 12 GO:0000272|GO:0008810 BJD13_11645 a887b8d70d59327983df3266c0d05960 777 Gene3D G3DSA:2.170.130.10 46 179 2.6E-10 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_11645 a887b8d70d59327983df3266c0d05960 777 SUPERFAMILY SSF56935 45 777 3.36E-90 T 17-10-2018 BJD13_11645 a887b8d70d59327983df3266c0d05960 777 Pfam PF07715 TonB-dependent Receptor Plug Domain 64 165 1.1E-10 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_11645 a887b8d70d59327983df3266c0d05960 777 Pfam PF00593 TonB dependent receptor 352 776 4.8E-41 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_11645 a887b8d70d59327983df3266c0d05960 777 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 760 777 - T 17-10-2018 IPR010917 TonB-dependent receptor, conserved site BJD13_02060 64f27cd6f2bf19f1648c4fae1f312ac7 155 SUPERFAMILY SSF53098 11 146 5.01E-31 T 17-10-2018 IPR012337 Ribonuclease H-like superfamily BJD13_02060 64f27cd6f2bf19f1648c4fae1f312ac7 155 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 14 145 1.4E-28 T 17-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 BJD13_02060 64f27cd6f2bf19f1648c4fae1f312ac7 155 Pfam PF03652 Holliday junction resolvase 12 146 4.5E-36 T 17-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 BJD13_02060 64f27cd6f2bf19f1648c4fae1f312ac7 155 SMART SM00732 11 111 7.1E-28 T 17-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 BJD13_02060 64f27cd6f2bf19f1648c4fae1f312ac7 155 Gene3D G3DSA:3.30.420.140 9 147 6.1E-36 T 17-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 BJD13_02060 64f27cd6f2bf19f1648c4fae1f312ac7 155 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 11 149 21.874 T 17-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 BJD13_14005 543811b1f426f7ba09ce139ab4d6c163 702 SUPERFAMILY SSF158472 375 426 4.84E-9 T 17-10-2018 BJD13_14005 543811b1f426f7ba09ce139ab4d6c163 702 Gene3D G3DSA:1.20.1480.50 338 430 1.9E-14 T 17-10-2018 BJD13_14005 543811b1f426f7ba09ce139ab4d6c163 702 Pfam PF02743 Cache domain 83 337 2.6E-21 T 17-10-2018 IPR033479 Double Cache domain 1 BJD13_14005 543811b1f426f7ba09ce139ab4d6c163 702 SMART SM00304 375 428 1.2E-9 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_14005 543811b1f426f7ba09ce139ab4d6c163 702 Pfam PF00672 HAMP domain 375 425 2.7E-9 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_14005 543811b1f426f7ba09ce139ab4d6c163 702 SUPERFAMILY SSF103190 172 252 2.39E-6 T 17-10-2018 IPR029151 Periplasmic sensor-like domain superfamily BJD13_14005 543811b1f426f7ba09ce139ab4d6c163 702 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 493 680 1.7E-45 T 17-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BJD13_14005 543811b1f426f7ba09ce139ab4d6c163 702 SMART SM00331 465 680 6.7E-42 T 17-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BJD13_14005 543811b1f426f7ba09ce139ab4d6c163 702 Gene3D G3DSA:3.30.450.20 80 251 7.5E-23 T 17-10-2018 BJD13_14005 543811b1f426f7ba09ce139ab4d6c163 702 Gene3D G3DSA:3.60.40.10 431 681 2.0E-62 T 17-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BJD13_14005 543811b1f426f7ba09ce139ab4d6c163 702 SUPERFAMILY SSF81606 477 680 1.2E-7 T 17-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BJD13_00735 1dc0797d169ff6f6763b7034a6d8c899 331 Gene3D G3DSA:3.90.1530.30 73 135 3.6E-10 T 17-10-2018 BJD13_00735 1dc0797d169ff6f6763b7034a6d8c899 331 SMART SM00470 58 148 1.6E-4 T 17-10-2018 IPR003115 ParB/Sulfiredoxin BJD13_00735 1dc0797d169ff6f6763b7034a6d8c899 331 Pfam PF02195 ParB-like nuclease domain 64 134 8.8E-7 T 17-10-2018 IPR003115 ParB/Sulfiredoxin BJD13_00735 1dc0797d169ff6f6763b7034a6d8c899 331 SUPERFAMILY SSF110849 78 151 4.53E-10 T 17-10-2018 IPR036086 ParB/Sulfiredoxin superfamily BJD13_12385 7d18919483fb9180c44a29b206b1322e 489 Pfam PF00171 Aldehyde dehydrogenase family 25 485 6.3E-149 T 17-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 BJD13_12385 7d18919483fb9180c44a29b206b1322e 489 Gene3D G3DSA:3.40.309.10 269 460 6.1E-158 T 17-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 BJD13_12385 7d18919483fb9180c44a29b206b1322e 489 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 17-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 BJD13_12385 7d18919483fb9180c44a29b206b1322e 489 Gene3D G3DSA:3.40.605.10 31 484 6.1E-158 T 17-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 BJD13_12385 7d18919483fb9180c44a29b206b1322e 489 SUPERFAMILY SSF53720 16 487 5.5E-146 T 17-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BJD13_11595 9b7a84596e66ff844d10eb9ebc12494f 417 Pfam PF13688 Metallo-peptidase family M12 201 383 6.0E-27 T 17-10-2018 BJD13_11595 9b7a84596e66ff844d10eb9ebc12494f 417 SUPERFAMILY SSF55486 200 388 5.57E-16 T 17-10-2018 BJD13_11595 9b7a84596e66ff844d10eb9ebc12494f 417 Gene3D G3DSA:3.40.390.10 191 390 2.3E-8 T 17-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 BJD13_06875 3b48975c48cebd576a536cda9b364cea 824 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 626 777 3.2E-53 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD13_06875 3b48975c48cebd576a536cda9b364cea 824 SMART SM00283 563 810 3.4E-92 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD13_06875 3b48975c48cebd576a536cda9b364cea 824 SMART SM00304 329 381 4.0E-7 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_06875 3b48975c48cebd576a536cda9b364cea 824 SMART SM00304 510 562 9.4 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_06875 3b48975c48cebd576a536cda9b364cea 824 SUPERFAMILY SSF58104 530 815 1.74E-71 T 17-10-2018 BJD13_06875 3b48975c48cebd576a536cda9b364cea 824 SUPERFAMILY SSF158472 330 379 5.23E-6 T 17-10-2018 BJD13_06875 3b48975c48cebd576a536cda9b364cea 824 Gene3D G3DSA:1.20.120.1530 323 467 3.0E-45 T 17-10-2018 BJD13_06875 3b48975c48cebd576a536cda9b364cea 824 Pfam PF00672 HAMP domain 330 378 3.4E-6 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_06875 3b48975c48cebd576a536cda9b364cea 824 Gene3D G3DSA:1.10.287.950 509 812 6.7E-85 T 17-10-2018 BJD13_00200 255ed6b81f741256786821da84d5d13e 126 Pfam PF04214 Protein of unknown function, DUF 27 95 4.6E-30 T 17-10-2018 IPR007332 Protein of unknown function DUF411 BJD13_04490 0b0f23d904c0ce60e61ab79ece057714 203 Gene3D G3DSA:1.10.287.990 20 89 9.1E-30 T 17-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BJD13_04490 0b0f23d904c0ce60e61ab79ece057714 203 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 96 197 8.7E-40 T 17-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BJD13_04490 0b0f23d904c0ce60e61ab79ece057714 203 PRINTS PR01703 Manganese superoxide dismutase signature 72 85 5.7E-28 T 17-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BJD13_04490 0b0f23d904c0ce60e61ab79ece057714 203 PRINTS PR01703 Manganese superoxide dismutase signature 162 174 5.7E-28 T 17-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BJD13_04490 0b0f23d904c0ce60e61ab79ece057714 203 PRINTS PR01703 Manganese superoxide dismutase signature 125 133 5.7E-28 T 17-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BJD13_04490 0b0f23d904c0ce60e61ab79ece057714 203 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 5.7E-28 T 17-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BJD13_04490 0b0f23d904c0ce60e61ab79ece057714 203 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 5.7E-28 T 17-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BJD13_04490 0b0f23d904c0ce60e61ab79ece057714 203 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 164 171 - T 17-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BJD13_04490 0b0f23d904c0ce60e61ab79ece057714 203 SUPERFAMILY SSF54719 88 201 5.11E-46 T 17-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BJD13_04490 0b0f23d904c0ce60e61ab79ece057714 203 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 89 2.4E-34 T 17-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BJD13_04490 0b0f23d904c0ce60e61ab79ece057714 203 PIRSF PIRSF000349 1 203 1.8E-82 T 17-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BJD13_04490 0b0f23d904c0ce60e61ab79ece057714 203 Gene3D G3DSA:2.40.500.20 90 203 3.7E-47 T 17-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BJD13_04490 0b0f23d904c0ce60e61ab79ece057714 203 SUPERFAMILY SSF46609 1 90 1.23E-37 T 17-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BJD13_03915 204b0c1a580cd929f26684a4612a9ac4 498 Pfam PF00202 Aminotransferase class-III 84 486 8.1E-36 T 17-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BJD13_03915 204b0c1a580cd929f26684a4612a9ac4 498 Gene3D G3DSA:3.90.1150.10 91 476 1.2E-58 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD13_03915 204b0c1a580cd929f26684a4612a9ac4 498 SUPERFAMILY SSF53383 77 488 3.7E-55 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD13_03915 204b0c1a580cd929f26684a4612a9ac4 498 Gene3D G3DSA:3.40.640.10 119 389 1.2E-58 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD13_14010 75d7009a40479c1d3fa473e5cd9d993c 143 SUPERFAMILY SSF55874 30 126 2.54E-7 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_14010 75d7009a40479c1d3fa473e5cd9d993c 143 Gene3D G3DSA:3.30.565.10 1 135 6.8E-21 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_14010 75d7009a40479c1d3fa473e5cd9d993c 143 Pfam PF13581 Histidine kinase-like ATPase domain 8 130 1.7E-22 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_19260 7e39eb7f9bd3ce91fd64ad2b4687b0f5 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 71 4.0E-8 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD13_19260 7e39eb7f9bd3ce91fd64ad2b4687b0f5 215 Gene3D G3DSA:1.10.357.10 62 215 9.5E-27 T 17-10-2018 BJD13_19260 7e39eb7f9bd3ce91fd64ad2b4687b0f5 215 SUPERFAMILY SSF46689 13 84 7.09E-11 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_19260 7e39eb7f9bd3ce91fd64ad2b4687b0f5 215 Gene3D G3DSA:1.10.10.60 11 61 1.2E-14 T 17-10-2018 BJD13_19445 9e18a8776a5f565fd19a1ded9f5d312e 219 SUPERFAMILY SSF53271 5 211 1.13E-43 T 17-10-2018 IPR029057 Phosphoribosyltransferase-like BJD13_19445 9e18a8776a5f565fd19a1ded9f5d312e 219 Gene3D G3DSA:3.40.50.2020 1 196 3.8E-68 T 17-10-2018 BJD13_19445 9e18a8776a5f565fd19a1ded9f5d312e 219 Pfam PF00156 Phosphoribosyl transferase domain 48 158 2.6E-15 T 17-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 BJD13_19445 9e18a8776a5f565fd19a1ded9f5d312e 219 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 11 188 3.8E-57 T 17-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BJD13_19445 9e18a8776a5f565fd19a1ded9f5d312e 219 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 219 31.421 T 17-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BJD13_02485 99fc7781fb1795631271b59301395908 446 Gene3D G3DSA:1.10.3080.10 24 439 2.9E-82 T 17-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 BJD13_02485 99fc7781fb1795631271b59301395908 446 PRINTS PR00762 Chloride channel signature 82 99 1.1E-29 T 17-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 BJD13_02485 99fc7781fb1795631271b59301395908 446 PRINTS PR00762 Chloride channel signature 364 380 1.1E-29 T 17-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 BJD13_02485 99fc7781fb1795631271b59301395908 446 PRINTS PR00762 Chloride channel signature 335 355 1.1E-29 T 17-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 BJD13_02485 99fc7781fb1795631271b59301395908 446 PRINTS PR00762 Chloride channel signature 168 187 1.1E-29 T 17-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 BJD13_02485 99fc7781fb1795631271b59301395908 446 PRINTS PR00762 Chloride channel signature 382 401 1.1E-29 T 17-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 BJD13_02485 99fc7781fb1795631271b59301395908 446 PRINTS PR00762 Chloride channel signature 116 135 1.1E-29 T 17-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 BJD13_02485 99fc7781fb1795631271b59301395908 446 Pfam PF00654 Voltage gated chloride channel 71 414 5.6E-81 T 17-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 BJD13_02485 99fc7781fb1795631271b59301395908 446 SUPERFAMILY SSF81340 10 429 2.09E-90 T 17-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 BJD13_20340 46886b13eff637d36f7609506bb1e907 261 Gene3D G3DSA:3.40.50.1820 30 255 2.1E-38 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_20340 46886b13eff637d36f7609506bb1e907 261 SUPERFAMILY SSF53474 26 251 2.34E-29 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_20340 46886b13eff637d36f7609506bb1e907 261 Pfam PF12697 Alpha/beta hydrolase family 36 247 1.9E-17 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD13_05540 50566c9f93fd4573e961760482932df2 118 SUPERFAMILY SSF55248 21 113 1.7E-31 T 17-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 BJD13_05540 50566c9f93fd4573e961760482932df2 118 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 19 112 23.994 T 17-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 BJD13_05540 50566c9f93fd4573e961760482932df2 118 Gene3D G3DSA:3.30.1360.20 20 117 3.4E-31 T 17-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 BJD13_05540 50566c9f93fd4573e961760482932df2 118 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 21 110 4.0E-27 T 17-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 BJD13_20355 1694ca57430a4bb0b1ed41ff10db8e10 314 Gene3D G3DSA:3.40.190.10 169 273 8.8E-64 T 17-10-2018 BJD13_20355 1694ca57430a4bb0b1ed41ff10db8e10 314 SUPERFAMILY SSF46785 9 117 4.52E-22 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_20355 1694ca57430a4bb0b1ed41ff10db8e10 314 Gene3D G3DSA:1.10.10.10 9 94 1.6E-26 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_20355 1694ca57430a4bb0b1ed41ff10db8e10 314 SUPERFAMILY SSF53850 96 305 4.89E-42 T 17-10-2018 BJD13_20355 1694ca57430a4bb0b1ed41ff10db8e10 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 68 6.5E-18 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_20355 1694ca57430a4bb0b1ed41ff10db8e10 314 Pfam PF03466 LysR substrate binding domain 95 300 1.2E-40 T 17-10-2018 IPR005119 LysR, substrate-binding BJD13_20355 1694ca57430a4bb0b1ed41ff10db8e10 314 Gene3D G3DSA:3.40.190.10 97 299 8.8E-64 T 17-10-2018 BJD13_05375 888fa3008fe73cb0795819e1a01e3eb9 154 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 135 4.0E-31 T 17-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 BJD13_05375 888fa3008fe73cb0795819e1a01e3eb9 154 Gene3D G3DSA:3.30.420.270 61 132 1.9E-11 T 17-10-2018 BJD13_01670 2a4a8324c31f6493af0d3bf558e8da54 358 Gene3D G3DSA:3.40.50.1820 74 281 5.8E-14 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_01670 2a4a8324c31f6493af0d3bf558e8da54 358 SUPERFAMILY SSF53474 83 261 3.1E-15 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_01670 2a4a8324c31f6493af0d3bf558e8da54 358 Pfam PF01764 Lipase (class 3) 94 254 2.1E-10 T 17-10-2018 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 BJD13_12145 808730e72a0aa873f006921aa8dc961d 469 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 237 247 - T 17-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site BJD13_12145 808730e72a0aa873f006921aa8dc961d 469 Pfam PF00082 Subtilase family 168 457 5.3E-55 T 17-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 BJD13_12145 808730e72a0aa873f006921aa8dc961d 469 SUPERFAMILY SSF52743 155 466 5.76E-75 T 17-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BJD13_12145 808730e72a0aa873f006921aa8dc961d 469 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 407 417 - T 17-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site BJD13_12145 808730e72a0aa873f006921aa8dc961d 469 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 173 183 - T 17-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site BJD13_12145 808730e72a0aa873f006921aa8dc961d 469 PRINTS PR00723 Subtilisin serine protease family (S8) signature 406 422 2.5E-18 T 17-10-2018 IPR015500 Peptidase S8, subtilisin-related BJD13_12145 808730e72a0aa873f006921aa8dc961d 469 PRINTS PR00723 Subtilisin serine protease family (S8) signature 233 246 2.5E-18 T 17-10-2018 IPR015500 Peptidase S8, subtilisin-related BJD13_12145 808730e72a0aa873f006921aa8dc961d 469 PRINTS PR00723 Subtilisin serine protease family (S8) signature 168 187 2.5E-18 T 17-10-2018 IPR015500 Peptidase S8, subtilisin-related BJD13_12145 808730e72a0aa873f006921aa8dc961d 469 Gene3D G3DSA:3.40.50.200 137 468 3.5E-106 T 17-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BJD13_06525 e83c8b4682d045d0859c31d8acae6915 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 3.5E-5 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_06525 e83c8b4682d045d0859c31d8acae6915 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 3.5E-5 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_06525 e83c8b4682d045d0859c31d8acae6915 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 3.5E-5 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_06525 e83c8b4682d045d0859c31d8acae6915 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 19 247 9.5E-46 T 17-10-2018 BJD13_06525 e83c8b4682d045d0859c31d8acae6915 254 Gene3D G3DSA:3.40.50.720 2 251 7.1E-63 T 17-10-2018 BJD13_06525 e83c8b4682d045d0859c31d8acae6915 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 17-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BJD13_06525 e83c8b4682d045d0859c31d8acae6915 254 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 13 186 0.0011 T 17-10-2018 BJD13_06525 e83c8b4682d045d0859c31d8acae6915 254 SUPERFAMILY SSF51735 8 248 3.81E-61 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_06525 e83c8b4682d045d0859c31d8acae6915 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 3.2E-28 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_06525 e83c8b4682d045d0859c31d8acae6915 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 3.2E-28 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_06525 e83c8b4682d045d0859c31d8acae6915 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 3.2E-28 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_06525 e83c8b4682d045d0859c31d8acae6915 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 3.2E-28 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_06525 e83c8b4682d045d0859c31d8acae6915 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 3.2E-28 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_06525 e83c8b4682d045d0859c31d8acae6915 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 3.2E-28 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_03140 aaa5c662852697167bfe9a3558955ed8 250 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 33 199 2.9E-41 T 17-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_03140 aaa5c662852697167bfe9a3558955ed8 250 Gene3D G3DSA:3.30.460.80 97 179 1.4E-29 T 17-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_03140 aaa5c662852697167bfe9a3558955ed8 250 Gene3D G3DSA:3.30.460.80 1 79 2.3E-7 T 17-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_03140 aaa5c662852697167bfe9a3558955ed8 250 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 132 187 5.0E-27 T 17-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_03140 aaa5c662852697167bfe9a3558955ed8 250 SUPERFAMILY SSF143243 8 219 9.81E-54 T 17-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_03140 aaa5c662852697167bfe9a3558955ed8 250 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 8 207 33.288 T 17-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_03140 aaa5c662852697167bfe9a3558955ed8 250 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 160 181 - T 17-10-2018 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_12570 dd640149972214c1e89352e855d8a7c4 277 SMART SM00382 34 215 1.4E-15 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_12570 dd640149972214c1e89352e855d8a7c4 277 SUPERFAMILY SSF52540 5 242 1.35E-65 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_12570 dd640149972214c1e89352e855d8a7c4 277 Gene3D G3DSA:3.40.50.300 3 264 1.1E-62 T 17-10-2018 BJD13_12570 dd640149972214c1e89352e855d8a7c4 277 Pfam PF00005 ABC transporter 26 167 9.2E-32 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD13_12570 dd640149972214c1e89352e855d8a7c4 277 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD13_11400 e2c196c208195a4e7e8e615adb5fe8be 290 SUPERFAMILY SSF53335 18 238 2.92E-43 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_11400 e2c196c208195a4e7e8e615adb5fe8be 290 Gene3D G3DSA:3.40.50.150 19 238 2.5E-42 T 17-10-2018 BJD13_11400 e2c196c208195a4e7e8e615adb5fe8be 290 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 22 235 6.9E-23 T 17-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 BJD13_11400 e2c196c208195a4e7e8e615adb5fe8be 290 TIGRFAM TIGR00571 dam: DNA adenine methylase 19 233 2.9E-37 T 17-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 BJD13_11400 e2c196c208195a4e7e8e615adb5fe8be 290 PIRSF PIRSF000398 12 288 8.5E-52 T 17-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 BJD13_11400 e2c196c208195a4e7e8e615adb5fe8be 290 Gene3D G3DSA:1.10.1020.10 70 170 2.5E-42 T 17-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 BJD13_11400 e2c196c208195a4e7e8e615adb5fe8be 290 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 44 58 1.7E-12 T 17-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 BJD13_11400 e2c196c208195a4e7e8e615adb5fe8be 290 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 22 38 1.7E-12 T 17-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 BJD13_11400 e2c196c208195a4e7e8e615adb5fe8be 290 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 63 76 1.7E-12 T 17-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 BJD13_11400 e2c196c208195a4e7e8e615adb5fe8be 290 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 189 201 1.7E-12 T 17-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 BJD13_11400 e2c196c208195a4e7e8e615adb5fe8be 290 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 192 198 - T 17-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 BJD13_16245 af7b455acc59f87baa86905fe55a22cf 427 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 417 5.5E-104 T 17-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit BJD13_16245 af7b455acc59f87baa86905fe55a22cf 427 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 422 2.5E-121 T 17-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 BJD13_16245 af7b455acc59f87baa86905fe55a22cf 427 PIRSF PIRSF006066 1 427 5.8E-140 T 17-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 BJD13_01955 ff398752b2a861bdb1a79f8aace97768 420 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 131 399 1.5E-86 T 17-10-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 BJD13_01955 ff398752b2a861bdb1a79f8aace97768 420 SUPERFAMILY SSF101960 15 400 1.44E-95 T 17-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily BJD13_01955 ff398752b2a861bdb1a79f8aace97768 420 Pfam PF01458 Uncharacterized protein family (UPF0051) 167 390 3.6E-64 T 17-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 BJD13_06925 28e25b9bcf89f6cb3db7eec452d24483 198 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 18 169 29.617 T 17-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 BJD13_06925 28e25b9bcf89f6cb3db7eec452d24483 198 Pfam PF03975 CheD chemotactic sensory transduction 66 165 9.7E-33 T 17-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 BJD13_06925 28e25b9bcf89f6cb3db7eec452d24483 198 SUPERFAMILY SSF64438 24 169 1.65E-50 T 17-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic BJD13_06925 28e25b9bcf89f6cb3db7eec452d24483 198 Gene3D G3DSA:3.30.1330.200 22 177 2.2E-51 T 17-10-2018 IPR038592 CheD-like superfamily BJD13_06520 e0f7aaa88a93b3cd80d8d66d7867b840 345 SUPERFAMILY SSF53901 4 334 1.63E-43 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 BJD13_06520 e0f7aaa88a93b3cd80d8d66d7867b840 345 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 114 184 9.7E-10 T 17-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 BJD13_06520 e0f7aaa88a93b3cd80d8d66d7867b840 345 Gene3D G3DSA:3.40.47.10 3 345 6.6E-100 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 BJD13_06520 e0f7aaa88a93b3cd80d8d66d7867b840 345 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 245 333 3.3E-25 T 17-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 BJD13_01695 d48174df69af5583d7d85cedd0085ea4 313 TIGRFAM TIGR01250 pro_imino_pep_2: proline-specific peptidase 3 291 5.7E-81 T 17-10-2018 IPR005945 Proline-specific peptidase GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 BJD13_01695 d48174df69af5583d7d85cedd0085ea4 313 PIRSF PIRSF005539 1 300 2.1E-153 T 17-10-2018 IPR005945 Proline-specific peptidase GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 BJD13_01695 d48174df69af5583d7d85cedd0085ea4 313 Pfam PF00561 alpha/beta hydrolase fold 29 279 2.3E-25 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD13_01695 d48174df69af5583d7d85cedd0085ea4 313 Gene3D G3DSA:3.40.50.1820 5 294 8.2E-87 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_01695 d48174df69af5583d7d85cedd0085ea4 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 57 68 4.7E-12 T 17-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 BJD13_01695 d48174df69af5583d7d85cedd0085ea4 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 102 116 4.7E-12 T 17-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 BJD13_01695 d48174df69af5583d7d85cedd0085ea4 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 30 38 4.7E-12 T 17-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 BJD13_01695 d48174df69af5583d7d85cedd0085ea4 313 SUPERFAMILY SSF53474 6 292 8.45E-59 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_13510 cb0385f062af51be3db81f287c8102ca 166 SUPERFAMILY SSF55729 10 159 3.37E-32 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD13_13510 cb0385f062af51be3db81f287c8102ca 166 Gene3D G3DSA:3.40.630.30 8 156 1.6E-37 T 17-10-2018 BJD13_13510 cb0385f062af51be3db81f287c8102ca 166 Pfam PF13673 Acetyltransferase (GNAT) domain 81 155 3.1E-12 T 17-10-2018 IPR000182 GNAT domain BJD13_18295 bc7b388af394fcb32102b37d12ec26d2 223 SUPERFAMILY SSF46689 97 150 1.16E-8 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_18295 bc7b388af394fcb32102b37d12ec26d2 223 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 97 140 - T 17-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 BJD13_18295 bc7b388af394fcb32102b37d12ec26d2 223 Pfam PF12833 Helix-turn-helix domain 70 146 2.8E-14 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD13_18295 bc7b388af394fcb32102b37d12ec26d2 223 SMART SM00342 62 144 4.9E-9 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD13_18295 bc7b388af394fcb32102b37d12ec26d2 223 Gene3D G3DSA:1.10.10.60 47 151 1.9E-20 T 17-10-2018 BJD13_06105 cad4136dab876b64664b5afbe7283ba2 402 Gene3D G3DSA:1.20.1250.20 3 387 8.4E-82 T 17-10-2018 BJD13_06105 cad4136dab876b64664b5afbe7283ba2 402 SUPERFAMILY SSF103473 4 387 2.62E-56 T 17-10-2018 IPR036259 MFS transporter superfamily BJD13_06105 cad4136dab876b64664b5afbe7283ba2 402 Pfam PF07690 Major Facilitator Superfamily 23 350 5.1E-38 T 17-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD13_12475 9c3efcc31fecb35ba5b205c3aeed23bf 262 SUPERFAMILY SSF53335 15 259 5.68E-73 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_12475 9c3efcc31fecb35ba5b205c3aeed23bf 262 Pfam PF00398 Ribosomal RNA adenine dimethylase 9 258 1.8E-62 T 17-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm BJD13_12475 9c3efcc31fecb35ba5b205c3aeed23bf 262 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 39 66 - T 17-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 BJD13_12475 9c3efcc31fecb35ba5b205c3aeed23bf 262 Gene3D G3DSA:1.10.8.100 197 260 1.2E-19 T 17-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 BJD13_12475 9c3efcc31fecb35ba5b205c3aeed23bf 262 SMART SM00650 23 194 1.2E-80 T 17-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 BJD13_12475 9c3efcc31fecb35ba5b205c3aeed23bf 262 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 9 258 2.1E-82 T 17-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 BJD13_12475 9c3efcc31fecb35ba5b205c3aeed23bf 262 Gene3D G3DSA:3.40.50.150 4 195 1.6E-64 T 17-10-2018 BJD13_12475 9c3efcc31fecb35ba5b205c3aeed23bf 262 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 7 261 55.222 T 17-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 BJD13_06260 c9cb33c1a17c1583bb361ead7415aef0 133 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 12 123 1.4E-19 T 17-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 BJD13_06260 c9cb33c1a17c1583bb361ead7415aef0 133 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 10 128 16.823 T 17-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 BJD13_13120 826484a2bd23083723028665631e8d01 490 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 251 258 - T 17-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 BJD13_13120 826484a2bd23083723028665631e8d01 490 TIGRFAM TIGR01804 BADH: betaine-aldehyde dehydrogenase 10 477 9.6E-215 T 17-10-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 BJD13_13120 826484a2bd23083723028665631e8d01 490 Gene3D G3DSA:3.40.605.10 3 254 9.3E-105 T 17-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 BJD13_13120 826484a2bd23083723028665631e8d01 490 Gene3D G3DSA:3.40.309.10 255 487 6.1E-81 T 17-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 BJD13_13120 826484a2bd23083723028665631e8d01 490 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 279 290 - T 17-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 BJD13_13120 826484a2bd23083723028665631e8d01 490 Hamap MF_00804 NAD/NADP-dependent betaine aldehyde dehydrogenase [betB]. 4 490 56.374 T 17-10-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 BJD13_13120 826484a2bd23083723028665631e8d01 490 Pfam PF00171 Aldehyde dehydrogenase family 18 479 1.4E-178 T 17-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 BJD13_13120 826484a2bd23083723028665631e8d01 490 SUPERFAMILY SSF53720 9 482 5.24E-173 T 17-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BJD13_03365 588da5d120d13de0a26a66fdd72a9ea8 136 Pfam PF10671 Toxin co-regulated pilus biosynthesis protein Q 51 122 1.9E-7 T 17-10-2018 IPR018927 Toxin co-regulated pilus biosynthesis protein Q, C-terminal BJD13_03365 588da5d120d13de0a26a66fdd72a9ea8 136 Gene3D G3DSA:3.55.50.70 47 131 9.0E-39 T 17-10-2018 BJD13_15470 80ecb3cc1320443e5822485e79606bb4 350 Gene3D G3DSA:3.30.530.90 171 345 1.4E-9 T 17-10-2018 BJD13_15470 80ecb3cc1320443e5822485e79606bb4 350 SUPERFAMILY SSF55961 139 342 4.12E-26 T 17-10-2018 BJD13_15470 80ecb3cc1320443e5822485e79606bb4 350 Pfam PF00355 Rieske [2Fe-2S] domain 25 105 9.4E-17 T 17-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 BJD13_15470 80ecb3cc1320443e5822485e79606bb4 350 SUPERFAMILY SSF50022 18 132 5.11E-33 T 17-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 BJD13_15470 80ecb3cc1320443e5822485e79606bb4 350 Gene3D G3DSA:2.102.10.10 21 155 2.1E-33 T 17-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 BJD13_18970 5596d1812adc19d98ebd7e97f38202bd 321 Gene3D G3DSA:1.10.10.10 4 59 3.6E-13 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_18970 5596d1812adc19d98ebd7e97f38202bd 321 Pfam PF08279 HTH domain 10 54 3.1E-10 T 17-10-2018 IPR013196 Helix-turn-helix, type 11 BJD13_18970 5596d1812adc19d98ebd7e97f38202bd 321 SUPERFAMILY SSF55681 84 270 5.14E-48 T 17-10-2018 BJD13_18970 5596d1812adc19d98ebd7e97f38202bd 321 Gene3D G3DSA:3.30.930.10 74 272 9.4E-54 T 17-10-2018 BJD13_18970 5596d1812adc19d98ebd7e97f38202bd 321 Pfam PF02237 Biotin protein ligase C terminal domain 274 319 3.5E-6 T 17-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BJD13_18970 5596d1812adc19d98ebd7e97f38202bd 321 Gene3D G3DSA:2.30.30.100 274 321 1.5E-9 T 17-10-2018 BJD13_18970 5596d1812adc19d98ebd7e97f38202bd 321 SUPERFAMILY SSF50037 274 319 5.04E-7 T 17-10-2018 IPR008988 Transcriptional repressor, C-terminal BJD13_18970 5596d1812adc19d98ebd7e97f38202bd 321 Pfam PF03099 Biotin/lipoate A/B protein ligase family 90 209 6.3E-9 T 17-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 BJD13_18970 5596d1812adc19d98ebd7e97f38202bd 321 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 2 319 30.421 T 17-10-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 BJD13_18970 5596d1812adc19d98ebd7e97f38202bd 321 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 87 318 4.9E-46 T 17-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BJD13_18970 5596d1812adc19d98ebd7e97f38202bd 321 SUPERFAMILY SSF46785 5 56 6.6E-9 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_15095 a883e963bb1fe0cec062d982af36726b 260 Pfam PF00561 alpha/beta hydrolase fold 22 132 2.2E-13 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD13_15095 a883e963bb1fe0cec062d982af36726b 260 Gene3D G3DSA:3.40.50.1820 2 258 5.3E-63 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_15095 a883e963bb1fe0cec062d982af36726b 260 TIGRFAM TIGR02427 protocat_pcaD: 3-oxoadipate enol-lactonase 10 258 1.4E-103 T 17-10-2018 IPR026968 3-oxoadipate enol-lactonase 1/2 GO:0042952|GO:0047570 KEGG: 00362+3.1.1.24|MetaCyc: PWY-6185 BJD13_15095 a883e963bb1fe0cec062d982af36726b 260 SUPERFAMILY SSF53474 2 258 1.4E-59 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_15095 a883e963bb1fe0cec062d982af36726b 260 PRINTS PR00111 Alpha/beta hydrolase fold signature 204 218 5.7E-7 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD13_15095 a883e963bb1fe0cec062d982af36726b 260 PRINTS PR00111 Alpha/beta hydrolase fold signature 47 62 5.7E-7 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD13_15095 a883e963bb1fe0cec062d982af36726b 260 PRINTS PR00111 Alpha/beta hydrolase fold signature 91 104 5.7E-7 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD13_15095 a883e963bb1fe0cec062d982af36726b 260 PRINTS PR00111 Alpha/beta hydrolase fold signature 105 118 5.7E-7 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD13_08075 44220fcb2da5edeea0bc3e1558cd24ac 333 Gene3D G3DSA:3.20.20.30 1 327 1.5E-93 T 17-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 BJD13_08075 44220fcb2da5edeea0bc3e1558cd24ac 333 Pfam PF00296 Luciferase-like monooxygenase 18 295 4.6E-33 T 17-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 BJD13_08075 44220fcb2da5edeea0bc3e1558cd24ac 333 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 4 323 3.8E-135 T 17-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 BJD13_08075 44220fcb2da5edeea0bc3e1558cd24ac 333 SUPERFAMILY SSF51679 4 322 5.89E-81 T 17-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 BJD13_13730 891877ea9b42c5f614a0de74c7ec546d 257 SUPERFAMILY SSF53850 1 253 1.81E-49 T 17-10-2018 BJD13_13730 891877ea9b42c5f614a0de74c7ec546d 257 SMART SM00062 33 257 4.3E-40 T 17-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BJD13_13730 891877ea9b42c5f614a0de74c7ec546d 257 Gene3D G3DSA:3.40.190.10 120 211 5.5E-73 T 17-10-2018 BJD13_13730 891877ea9b42c5f614a0de74c7ec546d 257 Gene3D G3DSA:3.40.190.10 25 244 5.5E-73 T 17-10-2018 BJD13_13730 891877ea9b42c5f614a0de74c7ec546d 257 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 34 253 4.1E-38 T 17-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BJD13_16100 297a4bdaf1933935e96f988fc2a2f2d1 158 SMART SM00855 3 114 1.1E-6 T 17-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 BJD13_16100 297a4bdaf1933935e96f988fc2a2f2d1 158 Gene3D G3DSA:3.40.50.1240 1 158 3.5E-43 T 17-10-2018 IPR029033 Histidine phosphatase superfamily BJD13_16100 297a4bdaf1933935e96f988fc2a2f2d1 158 SUPERFAMILY SSF53254 1 140 2.22E-27 T 17-10-2018 IPR029033 Histidine phosphatase superfamily BJD13_16100 297a4bdaf1933935e96f988fc2a2f2d1 158 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 98 2.2E-14 T 17-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 BJD13_16530 3f34381acbc1b75f308c24cc93104e1c 330 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 46 180 1.2E-62 T 17-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 BJD13_16530 3f34381acbc1b75f308c24cc93104e1c 330 Gene3D G3DSA:1.10.8.300 210 326 1.5E-30 T 17-10-2018 BJD13_16530 3f34381acbc1b75f308c24cc93104e1c 330 SUPERFAMILY SSF52540 20 302 2.03E-43 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_16530 3f34381acbc1b75f308c24cc93104e1c 330 PIRSF PIRSF002849 1 330 2.3E-121 T 17-10-2018 BJD13_16530 3f34381acbc1b75f308c24cc93104e1c 330 Gene3D G3DSA:3.40.50.300 27 197 1.8E-45 T 17-10-2018 BJD13_08725 3232d9fb60831f26ae54e67852bb7a4b 339 PIRSF PIRSF002756 4 337 2.3E-108 T 17-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 BJD13_08725 3232d9fb60831f26ae54e67852bb7a4b 339 Pfam PF12849 PBP superfamily domain 23 307 8.6E-61 T 17-10-2018 IPR024370 PBP domain BJD13_08725 3232d9fb60831f26ae54e67852bb7a4b 339 Gene3D G3DSA:3.40.190.10 101 277 3.2E-132 T 17-10-2018 BJD13_08725 3232d9fb60831f26ae54e67852bb7a4b 339 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 27 335 6.1E-127 T 17-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 BJD13_08725 3232d9fb60831f26ae54e67852bb7a4b 339 SUPERFAMILY SSF53850 27 335 1.03E-96 T 17-10-2018 BJD13_08725 3232d9fb60831f26ae54e67852bb7a4b 339 Gene3D G3DSA:3.40.190.10 28 324 3.2E-132 T 17-10-2018 BJD13_17870 3b855e06bb1d91d93dc4709d9b511c49 245 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 8 243 16.086 T 17-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 BJD13_17870 3b855e06bb1d91d93dc4709d9b511c49 245 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 12 39 1.9E-44 T 17-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 BJD13_17870 3b855e06bb1d91d93dc4709d9b511c49 245 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 89 107 1.9E-44 T 17-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 BJD13_17870 3b855e06bb1d91d93dc4709d9b511c49 245 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 107 133 1.9E-44 T 17-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 BJD13_17870 3b855e06bb1d91d93dc4709d9b511c49 245 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 158 186 1.9E-44 T 17-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 BJD13_17870 3b855e06bb1d91d93dc4709d9b511c49 245 ProSitePatterns PS01218 TatC family signature. 158 177 - T 17-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site BJD13_17870 3b855e06bb1d91d93dc4709d9b511c49 245 Pfam PF00902 Sec-independent protein translocase protein (TatC) 15 225 3.5E-65 T 17-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 BJD13_17870 3b855e06bb1d91d93dc4709d9b511c49 245 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 13 230 1.3E-66 T 17-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 BJD13_12270 2fb7b814970d58cfa91959e8ccca201f 189 SUPERFAMILY SSF52317 1 172 3.35E-32 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD13_12270 2fb7b814970d58cfa91959e8ccca201f 189 Pfam PF01965 DJ-1/PfpI family 3 167 1.9E-19 T 17-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 BJD13_12270 2fb7b814970d58cfa91959e8ccca201f 189 Gene3D G3DSA:3.40.50.880 1 187 8.3E-36 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD13_15695 2f652f17a23b416c525a6e5385f75fa6 539 Pfam PF03929 PepSY-associated TM region 10 370 5.5E-63 T 17-10-2018 IPR005625 PepSY-associated TM protein BJD13_08340 6bff2137bd72eda0b168787a8a067ed8 440 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 18 428 4.2E-122 T 17-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 BJD13_08340 6bff2137bd72eda0b168787a8a067ed8 440 ProSitePatterns PS00885 EPSP synthase signature 2. 345 363 - T 17-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 BJD13_08340 6bff2137bd72eda0b168787a8a067ed8 440 SUPERFAMILY SSF55205 9 431 1.29E-124 T 17-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 BJD13_08340 6bff2137bd72eda0b168787a8a067ed8 440 Gene3D G3DSA:3.65.10.10 26 235 5.4E-150 T 17-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 BJD13_08340 6bff2137bd72eda0b168787a8a067ed8 440 Gene3D G3DSA:3.65.10.10 18 423 5.4E-150 T 17-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 BJD13_08340 6bff2137bd72eda0b168787a8a067ed8 440 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 12 423 7.0E-118 T 17-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 BJD13_08340 6bff2137bd72eda0b168787a8a067ed8 440 ProSitePatterns PS00104 EPSP synthase signature 1. 93 107 - T 17-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 BJD13_08340 6bff2137bd72eda0b168787a8a067ed8 440 PIRSF PIRSF000505 5 436 3.6E-119 T 17-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 BJD13_08340 6bff2137bd72eda0b168787a8a067ed8 440 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 14 433 31.912 T 17-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 BJD13_05985 e357cd676bbe001421a90668db907e3d 437 Gene3D G3DSA:2.120.10.30 159 430 9.2E-14 T 17-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like BJD13_05985 e357cd676bbe001421a90668db907e3d 437 Pfam PF07995 Glucose / Sorbosone dehydrogenase 164 356 1.4E-11 T 17-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase BJD13_05985 e357cd676bbe001421a90668db907e3d 437 SUPERFAMILY SSF50952 60 430 7.19E-34 T 17-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 BJD13_20465 853a720c2ddaa1241d60b20e69c33395 288 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 54 284 5.1E-59 T 17-10-2018 BJD13_20465 853a720c2ddaa1241d60b20e69c33395 288 Gene3D G3DSA:3.40.50.720 2 286 1.0E-86 T 17-10-2018 BJD13_20465 853a720c2ddaa1241d60b20e69c33395 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 184 6.8E-37 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_20465 853a720c2ddaa1241d60b20e69c33395 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 194 213 6.8E-37 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_20465 853a720c2ddaa1241d60b20e69c33395 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 232 6.8E-37 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_20465 853a720c2ddaa1241d60b20e69c33395 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 249 269 6.8E-37 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_20465 853a720c2ddaa1241d60b20e69c33395 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 133 6.8E-37 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_20465 853a720c2ddaa1241d60b20e69c33395 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 46 63 6.8E-37 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_20465 853a720c2ddaa1241d60b20e69c33395 288 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 181 209 - T 17-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BJD13_20465 853a720c2ddaa1241d60b20e69c33395 288 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 122 133 4.9E-10 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_20465 853a720c2ddaa1241d60b20e69c33395 288 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 174 182 4.9E-10 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_20465 853a720c2ddaa1241d60b20e69c33395 288 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 194 213 4.9E-10 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_20465 853a720c2ddaa1241d60b20e69c33395 288 SUPERFAMILY SSF51735 43 285 4.03E-78 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_00255 50e55c24f76afa57bbedc0e895032bbb 608 SUPERFAMILY SSF52343 460 604 6.29E-35 T 17-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BJD13_00255 50e55c24f76afa57bbedc0e895032bbb 608 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 247 318 5.4E-7 T 17-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 BJD13_00255 50e55c24f76afa57bbedc0e895032bbb 608 SUPERFAMILY SSF54292 247 325 1.42E-13 T 17-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 BJD13_00255 50e55c24f76afa57bbedc0e895032bbb 608 Gene3D G3DSA:3.40.50.80 474 608 1.5E-30 T 17-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BJD13_00255 50e55c24f76afa57bbedc0e895032bbb 608 SUPERFAMILY SSF63380 308 473 7.4E-22 T 17-10-2018 IPR017938 Riboflavin synthase-like beta-barrel BJD13_00255 50e55c24f76afa57bbedc0e895032bbb 608 Pfam PF00970 Oxidoreductase FAD-binding domain 404 469 4.9E-5 T 17-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 BJD13_00255 50e55c24f76afa57bbedc0e895032bbb 608 Pfam PF03929 PepSY-associated TM region 7 231 6.2E-8 T 17-10-2018 IPR005625 PepSY-associated TM protein BJD13_00255 50e55c24f76afa57bbedc0e895032bbb 608 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 479 498 8.3E-5 T 17-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BJD13_00255 50e55c24f76afa57bbedc0e895032bbb 608 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 364 374 8.3E-5 T 17-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BJD13_00255 50e55c24f76afa57bbedc0e895032bbb 608 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 574 582 8.3E-5 T 17-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BJD13_00255 50e55c24f76afa57bbedc0e895032bbb 608 Gene3D G3DSA:3.10.20.30 242 328 1.6E-18 T 17-10-2018 IPR012675 Beta-grasp domain superfamily BJD13_00255 50e55c24f76afa57bbedc0e895032bbb 608 Pfam PF00175 Oxidoreductase NAD-binding domain 480 588 4.0E-16 T 17-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 BJD13_00255 50e55c24f76afa57bbedc0e895032bbb 608 Gene3D G3DSA:2.40.30.10 331 467 1.0E-32 T 17-10-2018 BJD13_01780 4a9e88e1b9cf3fb2e4650070803e8ef5 479 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 366 385 - T 17-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BJD13_01780 4a9e88e1b9cf3fb2e4650070803e8ef5 479 Gene3D G3DSA:1.10.10.60 418 476 2.1E-22 T 17-10-2018 BJD13_01780 4a9e88e1b9cf3fb2e4650070803e8ef5 479 PRINTS PR00045 Sigma-54 factor signature 452 470 2.1E-26 T 17-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BJD13_01780 4a9e88e1b9cf3fb2e4650070803e8ef5 479 PRINTS PR00045 Sigma-54 factor signature 394 405 2.1E-26 T 17-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BJD13_01780 4a9e88e1b9cf3fb2e4650070803e8ef5 479 PRINTS PR00045 Sigma-54 factor signature 188 205 2.1E-26 T 17-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BJD13_01780 4a9e88e1b9cf3fb2e4650070803e8ef5 479 PRINTS PR00045 Sigma-54 factor signature 378 390 2.1E-26 T 17-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BJD13_01780 4a9e88e1b9cf3fb2e4650070803e8ef5 479 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 475 3.1E-151 T 17-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BJD13_01780 4a9e88e1b9cf3fb2e4650070803e8ef5 479 Pfam PF04963 Sigma-54 factor, core binding domain 113 306 4.0E-50 T 17-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 BJD13_01780 4a9e88e1b9cf3fb2e4650070803e8ef5 479 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 457 464 - T 17-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BJD13_01780 4a9e88e1b9cf3fb2e4650070803e8ef5 479 Pfam PF04552 Sigma-54, DNA binding domain 320 477 1.1E-63 T 17-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding BJD13_01780 4a9e88e1b9cf3fb2e4650070803e8ef5 479 PIRSF PIRSF000774 1 479 3.6E-137 T 17-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BJD13_01780 4a9e88e1b9cf3fb2e4650070803e8ef5 479 Gene3D G3DSA:1.10.10.1330 118 232 1.7E-20 T 17-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily BJD13_01780 4a9e88e1b9cf3fb2e4650070803e8ef5 479 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 48 5.6E-18 T 17-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BJD13_04850 4a4f35c3780759818ab37d20ddbc5cc3 539 PIRSF PIRSF028431 13 506 3.5E-221 T 17-10-2018 IPR016883 Uncharacterised conserved protein UCP028431 BJD13_04850 4a4f35c3780759818ab37d20ddbc5cc3 539 Gene3D G3DSA:1.50.10.140 58 497 2.1E-163 T 17-10-2018 BJD13_04850 4a4f35c3780759818ab37d20ddbc5cc3 539 Pfam PF10091 Putative glucoamylase 231 478 4.1E-91 T 17-10-2018 IPR019282 Domain of unknown function DUF2329 BJD13_17095 c571d355d63b92150c1a0784dc05c75c 824 Gene3D G3DSA:2.70.98.10 46 389 2.5E-214 T 17-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 BJD13_17095 c571d355d63b92150c1a0784dc05c75c 824 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 46 800 1.1E-147 T 17-10-2018 IPR005887 Alpha-1,2-mannosidase, putative BJD13_17095 c571d355d63b92150c1a0784dc05c75c 824 Pfam PF07971 Glycosyl hydrolase family 92 280 798 5.7E-148 T 17-10-2018 IPR012939 Glycosyl hydrolase family 92 BJD13_17095 c571d355d63b92150c1a0784dc05c75c 824 Gene3D G3DSA:3.30.2080.10 337 800 2.5E-214 T 17-10-2018 BJD13_17095 c571d355d63b92150c1a0784dc05c75c 824 Gene3D G3DSA:1.20.1050.60 390 486 2.5E-214 T 17-10-2018 BJD13_17095 c571d355d63b92150c1a0784dc05c75c 824 SUPERFAMILY SSF48208 313 757 2.83E-17 T 17-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 BJD13_17095 c571d355d63b92150c1a0784dc05c75c 824 Gene3D G3DSA:1.20.1610.10 487 674 2.5E-214 T 17-10-2018 BJD13_02615 ded2938b8c45ba62acde7eb372c9a48e 368 Gene3D G3DSA:1.10.287.470 92 157 2.1E-50 T 17-10-2018 BJD13_02615 ded2938b8c45ba62acde7eb372c9a48e 368 Pfam PF13437 HlyD family secretion protein 170 251 1.9E-6 T 17-10-2018 BJD13_02615 ded2938b8c45ba62acde7eb372c9a48e 368 Gene3D G3DSA:2.40.50.100 58 204 2.1E-50 T 17-10-2018 BJD13_02615 ded2938b8c45ba62acde7eb372c9a48e 368 SUPERFAMILY SSF111369 54 194 1.26E-9 T 17-10-2018 BJD13_02615 ded2938b8c45ba62acde7eb372c9a48e 368 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 48 355 4.3E-61 T 17-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 BJD13_02615 ded2938b8c45ba62acde7eb372c9a48e 368 Gene3D G3DSA:2.40.30.170 51 277 2.1E-50 T 17-10-2018 BJD13_02615 ded2938b8c45ba62acde7eb372c9a48e 368 Gene3D G3DSA:2.40.420.20 278 353 2.1E-50 T 17-10-2018 BJD13_02615 ded2938b8c45ba62acde7eb372c9a48e 368 Pfam PF13533 Biotin-lipoyl like 67 106 7.0E-9 T 17-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain BJD13_16945 8214b8223bc1d5609f779510896c78ad 253 Pfam PF01618 MotA/TolQ/ExbB proton channel family 118 236 7.7E-37 T 17-10-2018 IPR002898 MotA/TolQ/ExbB proton channel BJD13_17460 3ccc4901155dfd3dd8e34d843c0f2b96 1353 Pfam PF13558 Putative exonuclease SbcCD, C subunit 978 1067 1.5E-20 T 17-10-2018 BJD13_17460 3ccc4901155dfd3dd8e34d843c0f2b96 1353 Pfam PF13555 P-loop containing region of AAA domain 31 90 4.9E-22 T 17-10-2018 BJD13_17460 3ccc4901155dfd3dd8e34d843c0f2b96 1353 SUPERFAMILY SSF52540 34 1080 1.13E-11 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_05080 262cbccd42f1692b210e5413f3e9e943 218 Gene3D G3DSA:3.40.50.850 10 209 7.3E-47 T 17-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 BJD13_05080 262cbccd42f1692b210e5413f3e9e943 218 Pfam PF00857 Isochorismatase family 19 169 9.7E-29 T 17-10-2018 IPR000868 Isochorismatase-like GO:0003824 BJD13_05080 262cbccd42f1692b210e5413f3e9e943 218 SUPERFAMILY SSF52499 11 210 6.28E-49 T 17-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 BJD13_21155 84a8412d73c8fe08954185dac5e10ff9 435 SUPERFAMILY SSF51905 4 426 4.21E-44 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_21155 84a8412d73c8fe08954185dac5e10ff9 435 Gene3D G3DSA:3.50.50.60 6 402 1.4E-34 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_21155 84a8412d73c8fe08954185dac5e10ff9 435 PRINTS PR00419 Adrenodoxin reductase family signature 3 25 2.7E-10 T 17-10-2018 BJD13_21155 84a8412d73c8fe08954185dac5e10ff9 435 PRINTS PR00419 Adrenodoxin reductase family signature 26 39 2.7E-10 T 17-10-2018 BJD13_21155 84a8412d73c8fe08954185dac5e10ff9 435 Pfam PF01593 Flavin containing amine oxidoreductase 13 404 3.6E-29 T 17-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 BJD13_21155 84a8412d73c8fe08954185dac5e10ff9 435 Gene3D G3DSA:3.90.660.50 82 378 1.4E-34 T 17-10-2018 BJD13_12675 b5aa66b035be72ce39047fad3c9d7b37 345 Pfam PF13387 Domain of unknown function (DUF4105) 128 275 7.7E-45 T 17-10-2018 IPR025178 Domain of unknown function DUF4105 BJD13_20110 7a29666aeeb32245d71e25260969dfc1 956 Pfam PF10145 Phage-related minor tail protein 237 436 1.1E-32 T 17-10-2018 IPR010090 Phage tail tape measure protein BJD13_20110 7a29666aeeb32245d71e25260969dfc1 956 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 199 544 1.8E-69 T 17-10-2018 IPR010090 Phage tail tape measure protein BJD13_13735 96e1138f45243592cb43781cb8cd6869 291 Pfam PF00892 EamA-like transporter family 3 136 1.5E-13 T 17-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BJD13_13735 96e1138f45243592cb43781cb8cd6869 291 Pfam PF00892 EamA-like transporter family 147 274 2.1E-7 T 17-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BJD13_13735 96e1138f45243592cb43781cb8cd6869 291 SUPERFAMILY SSF103481 35 141 1.2E-15 T 17-10-2018 BJD13_13735 96e1138f45243592cb43781cb8cd6869 291 SUPERFAMILY SSF103481 188 277 5.62E-13 T 17-10-2018 BJD13_17845 5bd031cd806b6266383004271173131f 286 PRINTS PR00111 Alpha/beta hydrolase fold signature 96 109 8.1E-7 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD13_17845 5bd031cd806b6266383004271173131f 286 PRINTS PR00111 Alpha/beta hydrolase fold signature 110 123 8.1E-7 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD13_17845 5bd031cd806b6266383004271173131f 286 PRINTS PR00111 Alpha/beta hydrolase fold signature 50 65 8.1E-7 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD13_17845 5bd031cd806b6266383004271173131f 286 Gene3D G3DSA:3.40.50.1820 12 276 1.3E-52 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_17845 5bd031cd806b6266383004271173131f 286 Pfam PF00561 alpha/beta hydrolase fold 26 136 5.6E-21 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD13_17845 5bd031cd806b6266383004271173131f 286 SUPERFAMILY SSF53474 21 282 4.22E-49 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_03130 3c4709b0b0dd6537809a97556cbaa7bf 118 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 1 118 19.155 T 17-10-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 BJD13_03130 3c4709b0b0dd6537809a97556cbaa7bf 118 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 20 117 1.8E-36 T 17-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_03130 3c4709b0b0dd6537809a97556cbaa7bf 118 Gene3D G3DSA:1.20.58.1610 1 118 7.5E-42 T 17-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_14265 d17a140fba86881c840420a7f52b02d7 179 Pfam PF11906 Protein of unknown function (DUF3426) 34 178 4.1E-36 T 17-10-2018 IPR021834 Protein of unknown function DUF3426 BJD13_06445 2e7624ccffc1cba3b6efa2ac0341d8eb 372 Hamap MF_00416 Flagellar P-ring protein [flgI]. 9 372 37.919 T 17-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BJD13_06445 2e7624ccffc1cba3b6efa2ac0341d8eb 372 PRINTS PR01010 Flagellar P-ring protein signature 169 187 3.1E-77 T 17-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BJD13_06445 2e7624ccffc1cba3b6efa2ac0341d8eb 372 PRINTS PR01010 Flagellar P-ring protein signature 28 43 3.1E-77 T 17-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BJD13_06445 2e7624ccffc1cba3b6efa2ac0341d8eb 372 PRINTS PR01010 Flagellar P-ring protein signature 63 78 3.1E-77 T 17-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BJD13_06445 2e7624ccffc1cba3b6efa2ac0341d8eb 372 PRINTS PR01010 Flagellar P-ring protein signature 43 58 3.1E-77 T 17-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BJD13_06445 2e7624ccffc1cba3b6efa2ac0341d8eb 372 PRINTS PR01010 Flagellar P-ring protein signature 195 213 3.1E-77 T 17-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BJD13_06445 2e7624ccffc1cba3b6efa2ac0341d8eb 372 PRINTS PR01010 Flagellar P-ring protein signature 89 108 3.1E-77 T 17-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BJD13_06445 2e7624ccffc1cba3b6efa2ac0341d8eb 372 PRINTS PR01010 Flagellar P-ring protein signature 111 128 3.1E-77 T 17-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BJD13_06445 2e7624ccffc1cba3b6efa2ac0341d8eb 372 PRINTS PR01010 Flagellar P-ring protein signature 259 271 3.1E-77 T 17-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BJD13_06445 2e7624ccffc1cba3b6efa2ac0341d8eb 372 PRINTS PR01010 Flagellar P-ring protein signature 128 146 3.1E-77 T 17-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BJD13_06445 2e7624ccffc1cba3b6efa2ac0341d8eb 372 Pfam PF02119 Flagellar P-ring protein 28 371 6.4E-135 T 17-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BJD13_16540 57d6491c9eb7d2d2e9f20572613368f5 399 TIGRFAM TIGR02226 two_anch: N-terminal double-transmembrane domain 4 82 2.4E-22 T 17-10-2018 IPR011933 Double transmembrane domain BJD13_16540 57d6491c9eb7d2d2e9f20572613368f5 399 Pfam PF07584 Aerotolerance regulator N-terminal 6 77 9.4E-9 T 17-10-2018 IPR024163 Aerotolerance regulator, N-terminal BJD13_08660 62a96345a30afaf52323fe27be53ba05 163 SUPERFAMILY SSF50800 17 162 2.83E-37 T 17-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily BJD13_08660 62a96345a30afaf52323fe27be53ba05 163 Gene3D G3DSA:2.40.33.20 13 163 9.1E-22 T 17-10-2018 BJD13_08660 62a96345a30afaf52323fe27be53ba05 163 Pfam PF03473 MOSC domain 57 161 2.9E-7 T 17-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 BJD13_07120 e946fe230540207f968d36e9ffbf6f74 99 TIGRFAM TIGR02448 TIGR02448: conserverd hypothetical protein 2 98 2.0E-30 T 17-10-2018 IPR012661 Conserved hypothetical protein CHP02448 BJD13_07120 e946fe230540207f968d36e9ffbf6f74 99 Pfam PF09498 Protein of unknown function (DUF2388) 29 98 2.1E-25 T 17-10-2018 IPR012661 Conserved hypothetical protein CHP02448 BJD13_03750 011a6dc96e0eb6098ffe52d93cdeec12 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 40 61 3.2E-12 T 17-10-2018 IPR002220 DapA-like GO:0016829 BJD13_03750 011a6dc96e0eb6098ffe52d93cdeec12 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 76 94 3.2E-12 T 17-10-2018 IPR002220 DapA-like GO:0016829 BJD13_03750 011a6dc96e0eb6098ffe52d93cdeec12 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 108 124 3.2E-12 T 17-10-2018 IPR002220 DapA-like GO:0016829 BJD13_03750 011a6dc96e0eb6098ffe52d93cdeec12 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 133 150 3.2E-12 T 17-10-2018 IPR002220 DapA-like GO:0016829 BJD13_03750 011a6dc96e0eb6098ffe52d93cdeec12 302 Pfam PF00701 Dihydrodipicolinate synthetase family 8 292 1.7E-58 T 17-10-2018 IPR002220 DapA-like GO:0016829 BJD13_03750 011a6dc96e0eb6098ffe52d93cdeec12 302 SUPERFAMILY SSF51569 6 293 7.54E-84 T 17-10-2018 BJD13_03750 011a6dc96e0eb6098ffe52d93cdeec12 302 PIRSF PIRSF001365 3 300 3.9E-75 T 17-10-2018 IPR002220 DapA-like GO:0016829 BJD13_03750 011a6dc96e0eb6098ffe52d93cdeec12 302 SMART SM01130 6 295 1.7E-93 T 17-10-2018 IPR002220 DapA-like GO:0016829 BJD13_03750 011a6dc96e0eb6098ffe52d93cdeec12 302 Gene3D G3DSA:3.20.20.70 5 297 2.4E-82 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD13_16210 dcfa07204916e79ec22612a0eb83266c 214 Pfam PF14300 Domain of unknown function (DUF4375) 97 204 1.7E-11 T 17-10-2018 IPR025402 Domain of unknown function DUF4375 BJD13_16210 dcfa07204916e79ec22612a0eb83266c 214 Gene3D G3DSA:3.30.2020.20 10 64 2.6E-5 T 17-10-2018 BJD13_08505 0ca060ae1a3259a16348c897ef167d89 464 Gene3D G3DSA:3.30.930.10 107 463 4.5E-107 T 17-10-2018 BJD13_08505 0ca060ae1a3259a16348c897ef167d89 464 PRINTS PR01042 Aspartyl-tRNA synthetase signature 206 218 9.2E-14 T 17-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD13_08505 0ca060ae1a3259a16348c897ef167d89 464 PRINTS PR01042 Aspartyl-tRNA synthetase signature 379 395 9.2E-14 T 17-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD13_08505 0ca060ae1a3259a16348c897ef167d89 464 PRINTS PR01042 Aspartyl-tRNA synthetase signature 222 235 9.2E-14 T 17-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD13_08505 0ca060ae1a3259a16348c897ef167d89 464 PRINTS PR01042 Aspartyl-tRNA synthetase signature 419 433 9.2E-14 T 17-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD13_08505 0ca060ae1a3259a16348c897ef167d89 464 SUPERFAMILY SSF55681 103 462 7.47E-94 T 17-10-2018 BJD13_08505 0ca060ae1a3259a16348c897ef167d89 464 SUPERFAMILY SSF50249 16 100 9.21E-17 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD13_08505 0ca060ae1a3259a16348c897ef167d89 464 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 457 3.1E-80 T 17-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD13_08505 0ca060ae1a3259a16348c897ef167d89 464 Pfam PF01336 OB-fold nucleic acid binding domain 20 97 3.7E-10 T 17-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 BJD13_08505 0ca060ae1a3259a16348c897ef167d89 464 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 16 464 5.7E-190 T 17-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 BJD13_08505 0ca060ae1a3259a16348c897ef167d89 464 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 4 464 45.123 T 17-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 BJD13_08505 0ca060ae1a3259a16348c897ef167d89 464 Gene3D G3DSA:2.40.50.140 2 102 1.0E-17 T 17-10-2018 BJD13_05400 072c5822b7bf5f22424b421220b128f0 472 Gene3D G3DSA:2.120.10.30 151 305 7.2E-26 T 17-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like BJD13_05400 072c5822b7bf5f22424b421220b128f0 472 Gene3D G3DSA:2.120.10.30 306 417 2.0E-17 T 17-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like BJD13_05400 072c5822b7bf5f22424b421220b128f0 472 Gene3D G3DSA:3.40.30.10 2 150 8.4E-19 T 17-10-2018 BJD13_05400 072c5822b7bf5f22424b421220b128f0 472 SUPERFAMILY SSF101898 166 465 5.23E-30 T 17-10-2018 BJD13_05400 072c5822b7bf5f22424b421220b128f0 472 Pfam PF01436 NHL repeat 219 243 6.6E-5 T 17-10-2018 IPR001258 NHL repeat GO:0005515 BJD13_05400 072c5822b7bf5f22424b421220b128f0 472 Pfam PF01436 NHL repeat 166 189 3.4E-5 T 17-10-2018 IPR001258 NHL repeat GO:0005515 BJD13_05400 072c5822b7bf5f22424b421220b128f0 472 SUPERFAMILY SSF52833 6 130 1.48E-18 T 17-10-2018 IPR036249 Thioredoxin-like superfamily BJD13_10305 c3f64af2c105e485fa651790de973b47 622 SUPERFAMILY SSF54211 219 458 7.59E-33 T 17-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BJD13_10305 c3f64af2c105e485fa651790de973b47 622 Gene3D G3DSA:3.30.565.10 14 210 2.5E-40 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_10305 c3f64af2c105e485fa651790de973b47 622 Gene3D G3DSA:3.30.230.80 232 383 2.8E-13 T 17-10-2018 BJD13_10305 c3f64af2c105e485fa651790de973b47 622 PRINTS PR00775 90kDa heat shock protein signature 170 187 5.9E-14 T 17-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal BJD13_10305 c3f64af2c105e485fa651790de973b47 622 PRINTS PR00775 90kDa heat shock protein signature 188 206 5.9E-14 T 17-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal BJD13_10305 c3f64af2c105e485fa651790de973b47 622 PRINTS PR00775 90kDa heat shock protein signature 118 140 5.9E-14 T 17-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal BJD13_10305 c3f64af2c105e485fa651790de973b47 622 PRINTS PR00775 90kDa heat shock protein signature 34 56 5.9E-14 T 17-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal BJD13_10305 c3f64af2c105e485fa651790de973b47 622 Pfam PF00183 Hsp90 protein 278 357 2.7E-8 T 17-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 BJD13_10305 c3f64af2c105e485fa651790de973b47 622 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 34 147 8.5E-10 T 17-10-2018 BJD13_10305 c3f64af2c105e485fa651790de973b47 622 SUPERFAMILY SSF55874 14 208 2.26E-38 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_10305 c3f64af2c105e485fa651790de973b47 622 PIRSF PIRSF002583 2 610 7.3E-103 T 17-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 BJD13_14095 5b73177f4a31d082fa2672abc92b9150 196 SUPERFAMILY SSF55469 10 195 1.96E-43 T 17-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 BJD13_14095 5b73177f4a31d082fa2672abc92b9150 196 Gene3D G3DSA:3.40.109.10 2 196 9.6E-32 T 17-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 BJD13_14095 5b73177f4a31d082fa2672abc92b9150 196 Hamap MF_01204 Probable malonic semialdehyde reductase RutE [rutE]. 2 196 47.063 T 17-10-2018 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE GO:0016491|GO:0055114 BJD13_14095 5b73177f4a31d082fa2672abc92b9150 196 Pfam PF00881 Nitroreductase family 16 158 4.9E-16 T 17-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 BJD13_20575 2d2c05deebd40d24641d472d9ebe1484 531 Pfam PF13520 Amino acid permease 13 423 4.1E-40 T 17-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BJD13_20575 2d2c05deebd40d24641d472d9ebe1484 531 Gene3D G3DSA:1.20.1740.10 5 471 1.7E-67 T 17-10-2018 BJD13_20575 2d2c05deebd40d24641d472d9ebe1484 531 PIRSF PIRSF006060 447 515 45.0 T 17-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BJD13_20575 2d2c05deebd40d24641d472d9ebe1484 531 PIRSF PIRSF006060 1 465 4.8E-72 T 17-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BJD13_08705 c827b61f6be534939591201aad737038 522 Pfam PF00916 Sulfate permease family 16 383 1.0E-55 T 17-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 BJD13_08705 c827b61f6be534939591201aad737038 522 Gene3D G3DSA:3.30.750.24 414 500 3.2E-6 T 17-10-2018 IPR036513 STAS domain superfamily BJD13_14515 a60429535bf78c0ebd17b44ab7447da2 223 Gene3D G3DSA:3.20.20.70 4 222 6.8E-86 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD13_14515 a60429535bf78c0ebd17b44ab7447da2 223 PIRSF PIRSF001461 1 223 2.2E-103 T 17-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 BJD13_14515 a60429535bf78c0ebd17b44ab7447da2 223 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 17-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 BJD13_14515 a60429535bf78c0ebd17b44ab7447da2 223 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 1.1E-90 T 17-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 BJD13_14515 a60429535bf78c0ebd17b44ab7447da2 223 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 6 216 2.2E-96 T 17-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 BJD13_14515 a60429535bf78c0ebd17b44ab7447da2 223 SUPERFAMILY SSF51366 4 217 1.12E-74 T 17-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 BJD13_14515 a60429535bf78c0ebd17b44ab7447da2 223 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 17-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 BJD13_07090 61bf4f13e1aa17919f6e2cac14ea644d 129 SUPERFAMILY SSF54593 2 128 1.24E-24 T 17-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD13_07090 61bf4f13e1aa17919f6e2cac14ea644d 129 Gene3D G3DSA:3.10.180.10 1 129 3.8E-38 T 17-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD13_07090 61bf4f13e1aa17919f6e2cac14ea644d 129 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 122 7.7E-11 T 17-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BJD13_21830 7cdeac3a0136bdbef3892feb636d17ea 438 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 42 219 5.1E-64 T 17-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 BJD13_21830 7cdeac3a0136bdbef3892feb636d17ea 438 Gene3D G3DSA:3.40.50.2000 225 411 1.8E-65 T 17-10-2018 BJD13_21830 7cdeac3a0136bdbef3892feb636d17ea 438 SUPERFAMILY SSF53756 58 414 7.53E-19 T 17-10-2018 BJD13_21830 7cdeac3a0136bdbef3892feb636d17ea 438 Gene3D G3DSA:3.40.50.11720 40 217 7.9E-47 T 17-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 BJD13_11695 1da9a75ab428bf7bd780f19db223d4cd 286 Gene3D G3DSA:3.10.290.10 38 99 8.6E-13 T 17-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 BJD13_11695 1da9a75ab428bf7bd780f19db223d4cd 286 Gene3D G3DSA:3.30.70.580 100 264 2.0E-47 T 17-10-2018 BJD13_11695 1da9a75ab428bf7bd780f19db223d4cd 286 Gene3D G3DSA:3.30.70.1560 161 256 2.0E-47 T 17-10-2018 BJD13_11695 1da9a75ab428bf7bd780f19db223d4cd 286 Pfam PF00849 RNA pseudouridylate synthase 99 237 3.7E-18 T 17-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD13_11695 1da9a75ab428bf7bd780f19db223d4cd 286 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 103 267 3.3E-40 T 17-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 BJD13_11695 1da9a75ab428bf7bd780f19db223d4cd 286 SUPERFAMILY SSF55120 99 271 5.28E-36 T 17-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD13_11695 1da9a75ab428bf7bd780f19db223d4cd 286 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 137 151 - T 17-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 BJD13_11695 1da9a75ab428bf7bd780f19db223d4cd 286 Pfam PF01479 S4 domain 39 80 3.3E-8 T 17-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_11695 1da9a75ab428bf7bd780f19db223d4cd 286 SUPERFAMILY SSF55174 39 122 4.58E-12 T 17-10-2018 BJD13_03325 b38f1f1d7deba5c97ded11b1811a0dab 136 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 35 119 1.6E-20 T 17-10-2018 IPR031982 Type IV minor pilin ComP BJD13_03325 b38f1f1d7deba5c97ded11b1811a0dab 136 Gene3D G3DSA:3.30.700.10 13 135 1.4E-19 T 17-10-2018 BJD13_03325 b38f1f1d7deba5c97ded11b1811a0dab 136 SUPERFAMILY SSF54523 13 126 1.49E-18 T 17-10-2018 BJD13_03325 b38f1f1d7deba5c97ded11b1811a0dab 136 PRINTS PR00885 Bacterial general secretion pathway protein H signature 23 37 2.3E-6 T 17-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 BJD13_03325 b38f1f1d7deba5c97ded11b1811a0dab 136 PRINTS PR00885 Bacterial general secretion pathway protein H signature 8 22 2.3E-6 T 17-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 BJD13_03325 b38f1f1d7deba5c97ded11b1811a0dab 136 Pfam PF07963 Prokaryotic N-terminal methylation motif 8 33 6.5E-10 T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD13_03325 b38f1f1d7deba5c97ded11b1811a0dab 136 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD13_03325 b38f1f1d7deba5c97ded11b1811a0dab 136 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 33 2.0E-9 T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD13_18785 085a52e18da27d3ad390a0baf5b63855 533 Pfam PF08386 TAP-like protein 417 515 2.3E-19 T 17-10-2018 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal BJD13_18785 085a52e18da27d3ad390a0baf5b63855 533 SUPERFAMILY SSF53474 117 490 1.46E-29 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_18785 085a52e18da27d3ad390a0baf5b63855 533 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 124 132 6.6E-6 T 17-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 BJD13_18785 085a52e18da27d3ad390a0baf5b63855 533 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 155 166 6.6E-6 T 17-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 BJD13_18785 085a52e18da27d3ad390a0baf5b63855 533 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 235 249 6.6E-6 T 17-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 BJD13_18785 085a52e18da27d3ad390a0baf5b63855 533 Pfam PF00561 alpha/beta hydrolase fold 123 266 1.8E-15 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD13_04725 2440f7d7e8f48bfb2de478c47989e513 540 PIRSF PIRSF006446 2 320 7.7E-111 T 17-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 BJD13_04725 2440f7d7e8f48bfb2de478c47989e513 540 PIRSF PIRSF006446 366 514 2.0E-32 T 17-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 BJD13_04725 2440f7d7e8f48bfb2de478c47989e513 540 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 503 1.5E-172 T 17-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 BJD13_12405 1ad727ddbc520dca2fe30a3e832c5d0f 298 SUPERFAMILY SSF53213 2 285 4.32E-91 T 17-10-2018 BJD13_12405 1ad727ddbc520dca2fe30a3e832c5d0f 298 Gene3D G3DSA:3.40.830.10 3 295 2.7E-85 T 17-10-2018 BJD13_12405 1ad727ddbc520dca2fe30a3e832c5d0f 298 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 8 271 9.2E-81 T 17-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 BJD13_12265 f64245439b225a094fbd58a70731b03d 322 Gene3D G3DSA:3.20.20.70 2 322 3.1E-120 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD13_12265 f64245439b225a094fbd58a70731b03d 322 SUPERFAMILY SSF51569 6 320 8.48E-97 T 17-10-2018 BJD13_12265 f64245439b225a094fbd58a70731b03d 322 TIGRFAM TIGR00874 talAB: transaldolase 7 320 1.5E-120 T 17-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 BJD13_12265 f64245439b225a094fbd58a70731b03d 322 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 17 316 6.3E-91 T 17-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 BJD13_12265 f64245439b225a094fbd58a70731b03d 322 ProSitePatterns PS01054 Transaldolase signature 1. 34 42 - T 17-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 BJD13_12265 f64245439b225a094fbd58a70731b03d 322 Hamap MF_00492 Transaldolase [tal]. 5 320 48.189 T 17-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 BJD13_12265 f64245439b225a094fbd58a70731b03d 322 ProSitePatterns PS00958 Transaldolase active site. 133 150 - T 17-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 BJD13_18155 5f29ad6738175dca3f01674ecc5ca23d 145 SUPERFAMILY SSF51316 19 139 2.3E-30 T 17-10-2018 IPR011057 Mss4-like superfamily BJD13_18155 5f29ad6738175dca3f01674ecc5ca23d 145 Gene3D G3DSA:2.170.150.70 23 140 2.7E-35 T 17-10-2018 BJD13_18155 5f29ad6738175dca3f01674ecc5ca23d 145 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 46 126 7.9E-9 T 17-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 BJD13_22515 edb7ebf8b9de16548c18b54c73235b09 356 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 37 341 2.0E-78 T 17-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 BJD13_22515 edb7ebf8b9de16548c18b54c73235b09 356 SUPERFAMILY SSF111369 52 267 2.09E-41 T 17-10-2018 BJD13_22515 edb7ebf8b9de16548c18b54c73235b09 356 Gene3D G3DSA:2.40.30.170 50 271 5.0E-76 T 17-10-2018 BJD13_22515 edb7ebf8b9de16548c18b54c73235b09 356 Gene3D G3DSA:1.10.287.470 96 155 5.0E-76 T 17-10-2018 BJD13_22515 edb7ebf8b9de16548c18b54c73235b09 356 Gene3D G3DSA:2.40.420.20 272 340 5.0E-76 T 17-10-2018 BJD13_22515 edb7ebf8b9de16548c18b54c73235b09 356 Gene3D G3DSA:2.40.50.100 61 189 5.0E-76 T 17-10-2018 BJD13_22515 edb7ebf8b9de16548c18b54c73235b09 356 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 54 261 2.5E-31 T 17-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BJD13_20770 addd5bd8265355ab7ff00bcb1358b0a7 268 SUPERFAMILY SSF51735 16 262 3.58E-67 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_20770 addd5bd8265355ab7ff00bcb1358b0a7 268 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 24 262 4.9E-59 T 17-10-2018 BJD13_20770 addd5bd8265355ab7ff00bcb1358b0a7 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 157 5.3E-39 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_20770 addd5bd8265355ab7ff00bcb1358b0a7 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 186 5.3E-39 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_20770 addd5bd8265355ab7ff00bcb1358b0a7 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 5.3E-39 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_20770 addd5bd8265355ab7ff00bcb1358b0a7 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 19 36 5.3E-39 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_20770 addd5bd8265355ab7ff00bcb1358b0a7 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 5.3E-39 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_20770 addd5bd8265355ab7ff00bcb1358b0a7 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 224 244 5.3E-39 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_20770 addd5bd8265355ab7ff00bcb1358b0a7 268 Gene3D G3DSA:3.40.50.720 6 267 8.0E-69 T 17-10-2018 BJD13_20770 addd5bd8265355ab7ff00bcb1358b0a7 268 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 154 182 - T 17-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BJD13_20770 addd5bd8265355ab7ff00bcb1358b0a7 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 92 103 8.4E-12 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_20770 addd5bd8265355ab7ff00bcb1358b0a7 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 155 8.4E-12 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_20770 addd5bd8265355ab7ff00bcb1358b0a7 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 167 186 8.4E-12 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_11365 ba94a63d2bac2d2ef9e56e3531541ec9 349 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 71 299 1.5E-42 T 17-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 BJD13_11365 ba94a63d2bac2d2ef9e56e3531541ec9 349 Gene3D G3DSA:3.40.50.2000 161 342 1.4E-39 T 17-10-2018 BJD13_11365 ba94a63d2bac2d2ef9e56e3531541ec9 349 Gene3D G3DSA:3.40.50.2000 3 155 6.9E-21 T 17-10-2018 BJD13_11365 ba94a63d2bac2d2ef9e56e3531541ec9 349 SUPERFAMILY SSF53756 8 345 1.82E-77 T 17-10-2018 BJD13_14835 fd5f158c9786ad09cc2791d3be94e53b 88 SUPERFAMILY SSF46689 1 73 1.25E-13 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_14835 fd5f158c9786ad09cc2791d3be94e53b 88 Pfam PF01527 Transposase 2 71 2.3E-18 T 17-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 BJD13_10700 bdb75480d50524b288636538e17383f0 530 Pfam PF00326 Prolyl oligopeptidase family 316 525 1.4E-46 T 17-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 BJD13_10700 bdb75480d50524b288636538e17383f0 530 Gene3D G3DSA:3.40.50.1820 261 528 8.5E-70 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_10700 bdb75480d50524b288636538e17383f0 530 SUPERFAMILY SSF53474 271 525 1.79E-67 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_04805 d3602d1d7fffeabfaef582881243103f 282 Gene3D G3DSA:2.130.10.10 56 276 7.6E-9 T 17-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BJD13_04805 d3602d1d7fffeabfaef582881243103f 282 Pfam PF05096 Glutamine cyclotransferase 49 280 2.8E-92 T 17-10-2018 IPR007788 Glutaminyl-peptide cyclotransferase GO:0016603|GO:0017186 MetaCyc: PWY-7942 BJD13_04805 d3602d1d7fffeabfaef582881243103f 282 SUPERFAMILY SSF50969 51 279 2.16E-20 T 17-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like BJD13_06435 b93bd3584f43667c5f74b6235249cae6 261 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 260 5.1E-114 T 17-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 BJD13_06435 b93bd3584f43667c5f74b6235249cae6 261 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 17-10-2018 IPR019776 Flagellar basal body rod protein, conserved site BJD13_06435 b93bd3584f43667c5f74b6235249cae6 261 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 259 2.3E-24 T 17-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BJD13_06435 b93bd3584f43667c5f74b6235249cae6 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 136 1.3E-48 T 17-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G BJD13_06435 b93bd3584f43667c5f74b6235249cae6 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 144 243 2.4E-31 T 17-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G BJD13_06435 b93bd3584f43667c5f74b6235249cae6 261 Pfam PF00460 Flagella basal body rod protein 5 35 8.4E-14 T 17-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 BJD13_06435 b93bd3584f43667c5f74b6235249cae6 261 SUPERFAMILY SSF117143 93 222 2.75E-34 T 17-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like BJD13_12670 c4ba4e73a2d5db8a670603f34f08bb54 664 Gene3D G3DSA:3.40.50.1820 359 636 1.9E-22 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_12670 c4ba4e73a2d5db8a670603f34f08bb54 664 SUPERFAMILY SSF53474 361 621 1.04E-21 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_05885 c0606f0e8c2d1d5038163b020e880254 445 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 445 2.6E-150 T 17-10-2018 IPR010263 Type VI secretion protein, VC_A0114 BJD13_05885 c0606f0e8c2d1d5038163b020e880254 445 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 443 3.4E-149 T 17-10-2018 IPR010263 Type VI secretion protein, VC_A0114 BJD13_06025 eafcead860882ef83bcbf7822cfeac43 371 Gene3D G3DSA:2.40.420.20 55 362 8.6E-93 T 17-10-2018 BJD13_06025 eafcead860882ef83bcbf7822cfeac43 371 SUPERFAMILY SSF111369 78 301 1.57E-25 T 17-10-2018 BJD13_06025 eafcead860882ef83bcbf7822cfeac43 371 Gene3D G3DSA:2.40.30.170 67 303 8.6E-93 T 17-10-2018 BJD13_06025 eafcead860882ef83bcbf7822cfeac43 371 Gene3D G3DSA:2.40.50.100 81 223 8.6E-93 T 17-10-2018 BJD13_06025 eafcead860882ef83bcbf7822cfeac43 371 Gene3D G3DSA:1.10.287.470 115 184 8.6E-93 T 17-10-2018 BJD13_06025 eafcead860882ef83bcbf7822cfeac43 371 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 56 369 2.5E-53 T 17-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 BJD13_06025 eafcead860882ef83bcbf7822cfeac43 371 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 66 297 4.8E-44 T 17-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BJD13_04975 44a7c57f632412feb8685ca45f2fd342 323 SUPERFAMILY SSF50129 11 163 2.99E-25 T 17-10-2018 IPR011032 GroES-like superfamily BJD13_04975 44a7c57f632412feb8685ca45f2fd342 323 SUPERFAMILY SSF51735 130 290 2.7E-34 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_04975 44a7c57f632412feb8685ca45f2fd342 323 SMART SM00829 13 321 9.0E-10 T 17-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 BJD13_04975 44a7c57f632412feb8685ca45f2fd342 323 Gene3D G3DSA:3.90.180.10 20 314 3.6E-67 T 17-10-2018 BJD13_04975 44a7c57f632412feb8685ca45f2fd342 323 Pfam PF00107 Zinc-binding dehydrogenase 169 285 4.5E-18 T 17-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 BJD13_04975 44a7c57f632412feb8685ca45f2fd342 323 Gene3D G3DSA:3.40.50.720 139 271 3.6E-67 T 17-10-2018 BJD13_04975 44a7c57f632412feb8685ca45f2fd342 323 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 126 3.2E-5 T 17-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 BJD13_03380 e9acd2f17dd23b676ecf03374ab0f405 389 Gene3D G3DSA:2.40.128.260 201 381 4.0E-37 T 17-10-2018 BJD13_03380 e9acd2f17dd23b676ecf03374ab0f405 389 Pfam PF03743 Bacterial conjugation TrbI-like protein 198 383 1.3E-45 T 17-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI BJD13_03380 e9acd2f17dd23b676ecf03374ab0f405 389 Gene3D G3DSA:1.10.1200.160 331 362 4.0E-37 T 17-10-2018 BJD13_10445 c1a9e763741e31b2f464b7b2c125796f 196 Pfam PF13499 EF-hand domain pair 58 107 1.9E-7 T 17-10-2018 IPR002048 EF-hand domain GO:0005509 BJD13_10445 c1a9e763741e31b2f464b7b2c125796f 196 Gene3D G3DSA:1.10.238.10 139 184 3.6E-5 T 17-10-2018 BJD13_10445 c1a9e763741e31b2f464b7b2c125796f 196 Gene3D G3DSA:1.10.238.10 35 80 3.4E-10 T 17-10-2018 BJD13_10445 c1a9e763741e31b2f464b7b2c125796f 196 Gene3D G3DSA:1.10.238.10 89 138 1.1E-9 T 17-10-2018 BJD13_10445 c1a9e763741e31b2f464b7b2c125796f 196 Pfam PF13202 EF hand 37 50 0.0027 T 17-10-2018 IPR002048 EF-hand domain GO:0005509 BJD13_10445 c1a9e763741e31b2f464b7b2c125796f 196 Pfam PF13202 EF hand 117 131 0.0028 T 17-10-2018 IPR002048 EF-hand domain GO:0005509 BJD13_10445 c1a9e763741e31b2f464b7b2c125796f 196 Pfam PF13202 EF hand 144 163 4.4E-6 T 17-10-2018 IPR002048 EF-hand domain GO:0005509 BJD13_10445 c1a9e763741e31b2f464b7b2c125796f 196 ProSitePatterns PS00018 EF-hand calcium-binding domain. 150 162 - T 17-10-2018 IPR018247 EF-Hand 1, calcium-binding site BJD13_10445 c1a9e763741e31b2f464b7b2c125796f 196 SUPERFAMILY SSF47473 58 164 1.6E-16 T 17-10-2018 IPR011992 EF-hand domain pair BJD13_05990 0cef211d6dd5f078945172bd84e42fa0 138 PIRSF PIRSF029509 1 138 2.6E-41 T 17-10-2018 IPR016923 Uncharacterised conserved protein UCP029509, membrane BJD13_09375 9551430aba70544467e2218422eef7ec 161 TIGRFAM TIGR00754 bfr: bacterioferritin 1 154 8.4E-40 T 17-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BJD13_09375 9551430aba70544467e2218422eef7ec 161 Gene3D G3DSA:1.20.1260.10 1 154 8.1E-56 T 17-10-2018 IPR012347 Ferritin-like BJD13_09375 9551430aba70544467e2218422eef7ec 161 PIRSF PIRSF002560 1 157 1.1E-58 T 17-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BJD13_09375 9551430aba70544467e2218422eef7ec 161 Pfam PF00210 Ferritin-like domain 9 144 2.7E-34 T 17-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 BJD13_09375 9551430aba70544467e2218422eef7ec 161 PRINTS PR00601 Bacterioferritin signature 3 22 3.9E-37 T 17-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BJD13_09375 9551430aba70544467e2218422eef7ec 161 PRINTS PR00601 Bacterioferritin signature 44 64 3.9E-37 T 17-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BJD13_09375 9551430aba70544467e2218422eef7ec 161 PRINTS PR00601 Bacterioferritin signature 106 126 3.9E-37 T 17-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BJD13_09375 9551430aba70544467e2218422eef7ec 161 PRINTS PR00601 Bacterioferritin signature 23 43 3.9E-37 T 17-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BJD13_09375 9551430aba70544467e2218422eef7ec 161 PRINTS PR00601 Bacterioferritin signature 85 105 3.9E-37 T 17-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BJD13_09375 9551430aba70544467e2218422eef7ec 161 PRINTS PR00601 Bacterioferritin signature 128 149 3.9E-37 T 17-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BJD13_09375 9551430aba70544467e2218422eef7ec 161 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 17-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 BJD13_09375 9551430aba70544467e2218422eef7ec 161 SUPERFAMILY SSF47240 1 156 3.87E-43 T 17-10-2018 IPR009078 Ferritin-like superfamily BJD13_11540 e347e8fa97b03750e6b8369f8d899261 131 SUPERFAMILY SSF69118 9 112 2.22E-24 T 17-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 BJD13_11540 e347e8fa97b03750e6b8369f8d899261 131 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 48 95 2.3E-10 T 17-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 BJD13_11540 e347e8fa97b03750e6b8369f8d899261 131 Gene3D G3DSA:1.20.1290.10 6 123 3.4E-34 T 17-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 BJD13_11540 e347e8fa97b03750e6b8369f8d899261 131 Pfam PF02627 Carboxymuconolactone decarboxylase family 32 112 3.3E-17 T 17-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 BJD13_12430 0b09fe5759517ed4e1c961ad0a2c154b 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 7.1E-19 T 17-10-2018 BJD13_12430 0b09fe5759517ed4e1c961ad0a2c154b 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 7.1E-19 T 17-10-2018 BJD13_12430 0b09fe5759517ed4e1c961ad0a2c154b 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 7.1E-19 T 17-10-2018 BJD13_12430 0b09fe5759517ed4e1c961ad0a2c154b 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 7.1E-19 T 17-10-2018 BJD13_12430 0b09fe5759517ed4e1c961ad0a2c154b 393 Gene3D G3DSA:3.30.9.50 82 270 1.3E-105 T 17-10-2018 BJD13_12430 0b09fe5759517ed4e1c961ad0a2c154b 393 Pfam PF01494 FAD binding domain 8 322 1.4E-27 T 17-10-2018 IPR002938 FAD-binding domain GO:0071949 BJD13_12430 0b09fe5759517ed4e1c961ad0a2c154b 393 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 17-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 BJD13_12430 0b09fe5759517ed4e1c961ad0a2c154b 393 SUPERFAMILY SSF51905 8 385 3.11E-55 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_12430 0b09fe5759517ed4e1c961ad0a2c154b 393 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 8 391 3.4E-131 T 17-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 BJD13_12430 0b09fe5759517ed4e1c961ad0a2c154b 393 Gene3D G3DSA:3.50.50.60 8 339 1.3E-105 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_10330 aaed8ac9d2a0a6114920bb2b0674e2f0 565 SMART SM00228 463 530 0.0087 T 17-10-2018 IPR001478 PDZ domain GO:0005515 BJD13_10330 aaed8ac9d2a0a6114920bb2b0674e2f0 565 PIRSF PIRSF016493 1 565 3.5E-145 T 17-10-2018 IPR024191 Peptidase M61 BJD13_10330 aaed8ac9d2a0a6114920bb2b0674e2f0 565 Pfam PF05299 M61 glycyl aminopeptidase 241 359 4.2E-35 T 17-10-2018 IPR007963 Peptidase M61, catalytic domain BJD13_10330 aaed8ac9d2a0a6114920bb2b0674e2f0 565 Gene3D G3DSA:2.30.42.10 470 541 4.0E-6 T 17-10-2018 BJD13_10330 aaed8ac9d2a0a6114920bb2b0674e2f0 565 Gene3D G3DSA:1.10.390.60 161 425 5.3E-62 T 17-10-2018 BJD13_10330 aaed8ac9d2a0a6114920bb2b0674e2f0 565 Gene3D G3DSA:2.60.40.3650 1 148 3.8E-5 T 17-10-2018 BJD13_10330 aaed8ac9d2a0a6114920bb2b0674e2f0 565 Pfam PF07720 Tetratricopeptide repeat 177 211 2.3E-9 T 17-10-2018 IPR011716 Tetratricopeptide TPR-3 BJD13_10330 aaed8ac9d2a0a6114920bb2b0674e2f0 565 SUPERFAMILY SSF50156 463 537 1.94E-8 T 17-10-2018 IPR036034 PDZ superfamily GO:0005515 BJD13_11825 6bcf3ef6a87b5254c2b713bc8698049b 147 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 4 146 7.0E-44 T 17-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_11825 6bcf3ef6a87b5254c2b713bc8698049b 147 ProSitePatterns PS00475 Ribosomal protein L15 signature. 112 142 - T 17-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_11825 6bcf3ef6a87b5254c2b713bc8698049b 147 Gene3D G3DSA:3.100.10.10 73 147 1.0E-11 T 17-10-2018 BJD13_11825 6bcf3ef6a87b5254c2b713bc8698049b 147 SUPERFAMILY SSF52080 6 146 2.88E-38 T 17-10-2018 IPR036227 Ribosomal L18e/L15P superfamily BJD13_11825 6bcf3ef6a87b5254c2b713bc8698049b 147 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 30 146 5.0E-26 T 17-10-2018 IPR021131 Ribosomal protein L18e/L15P BJD13_11825 6bcf3ef6a87b5254c2b713bc8698049b 147 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 5 147 17.174 T 17-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 BJD13_08895 04220216a96dfe3db9a86a3805bfac51 291 Pfam PF00005 ABC transporter 25 162 8.5E-20 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD13_08895 04220216a96dfe3db9a86a3805bfac51 291 SUPERFAMILY SSF52540 9 225 2.57E-42 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_08895 04220216a96dfe3db9a86a3805bfac51 291 Gene3D G3DSA:3.40.50.300 2 235 2.3E-43 T 17-10-2018 BJD13_08895 04220216a96dfe3db9a86a3805bfac51 291 SMART SM00382 34 212 6.4E-13 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_08560 4b1de70d3fb398993d5d04b159b4b43b 205 ProDom PD104924 XAC1607 AF0417 7 201 2.0E-101 T 17-10-2018 BJD13_08560 4b1de70d3fb398993d5d04b159b4b43b 205 Pfam PF11655 Protein of unknown function (DUF2589) 15 191 2.9E-48 T 17-10-2018 IPR024510 Protein of unknown function DUF2589 BJD13_22935 5830e3ac9570f0f1b3c032a0f1ecf013 244 Pfam PF02654 Cobalamin-5-phosphate synthase 8 237 2.8E-52 T 17-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 BJD13_22935 5830e3ac9570f0f1b3c032a0f1ecf013 244 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 1 239 8.6E-36 T 17-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 BJD13_22935 5830e3ac9570f0f1b3c032a0f1ecf013 244 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 244 48.531 T 17-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 BJD13_21105 92b5b31dd9c6fe862a00c3e9a21af867 377 SUPERFAMILY SSF52540 7 337 3.03E-70 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_21105 92b5b31dd9c6fe862a00c3e9a21af867 377 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 6 341 4.1E-133 T 17-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 BJD13_21105 92b5b31dd9c6fe862a00c3e9a21af867 377 Gene3D G3DSA:3.40.50.300 101 351 3.7E-90 T 17-10-2018 BJD13_21105 92b5b31dd9c6fe862a00c3e9a21af867 377 Pfam PF00437 Type II/IV secretion system protein 9 268 1.6E-36 T 17-10-2018 IPR001482 Type II/IV secretion system protein BJD13_21105 92b5b31dd9c6fe862a00c3e9a21af867 377 Gene3D G3DSA:3.30.450.90 1 99 7.8E-28 T 17-10-2018 BJD13_21275 5ecb0c8b0a3dbe7d26f15d3dcfaaa75c 280 SUPERFAMILY SSF52540 23 249 5.61E-59 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_21275 5ecb0c8b0a3dbe7d26f15d3dcfaaa75c 280 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD13_21275 5ecb0c8b0a3dbe7d26f15d3dcfaaa75c 280 Pfam PF00005 ABC transporter 41 190 4.1E-31 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD13_21275 5ecb0c8b0a3dbe7d26f15d3dcfaaa75c 280 SMART SM00382 48 238 6.4E-15 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_21275 5ecb0c8b0a3dbe7d26f15d3dcfaaa75c 280 Gene3D G3DSA:3.40.50.300 22 279 2.2E-63 T 17-10-2018 BJD13_03995 88f52144a23b4557de73d23832139a35 425 Pfam PF04966 Carbohydrate-selective porin, OprB family 56 424 7.4E-86 T 17-10-2018 IPR007049 Carbohydrate-selective porin OprB GO:0008643|GO:0015288|GO:0016021 BJD13_03995 88f52144a23b4557de73d23832139a35 425 Gene3D G3DSA:2.40.160.180 29 424 6.9E-101 T 17-10-2018 IPR038673 Carbohydrate-selective porin OprB superfamily BJD13_20805 e58ca8121432eae83f4d5475a2341823 298 SUPERFAMILY SSF103481 185 285 9.42E-10 T 17-10-2018 BJD13_20805 e58ca8121432eae83f4d5475a2341823 298 Pfam PF00892 EamA-like transporter family 154 280 1.6E-8 T 17-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BJD13_20805 e58ca8121432eae83f4d5475a2341823 298 Pfam PF00892 EamA-like transporter family 10 141 5.3E-16 T 17-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BJD13_20805 e58ca8121432eae83f4d5475a2341823 298 SUPERFAMILY SSF103481 48 144 3.14E-15 T 17-10-2018 BJD13_22725 78ff5e9ec138029e7274885db7b6df1a 185 SUPERFAMILY SSF53756 4 183 6.8E-15 T 17-10-2018 BJD13_22725 78ff5e9ec138029e7274885db7b6df1a 185 Gene3D G3DSA:3.40.50.2000 2 170 5.2E-19 T 17-10-2018 BJD13_22725 78ff5e9ec138029e7274885db7b6df1a 185 Pfam PF13692 Glycosyl transferases group 1 4 145 4.2E-10 T 17-10-2018 BJD13_19285 642398bf76584110527417e3ff7b09bd 169 PIRSF PIRSF036893 1 168 5.3E-53 T 17-10-2018 IPR022271 Lipocalin, ApoD type BJD13_19285 642398bf76584110527417e3ff7b09bd 169 SUPERFAMILY SSF50814 5 161 6.23E-39 T 17-10-2018 IPR012674 Calycin BJD13_19285 642398bf76584110527417e3ff7b09bd 169 Pfam PF08212 Lipocalin-like domain 13 159 9.1E-55 T 17-10-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain BJD13_19285 642398bf76584110527417e3ff7b09bd 169 Gene3D G3DSA:2.40.128.20 2 167 2.3E-47 T 17-10-2018 IPR012674 Calycin BJD13_19285 642398bf76584110527417e3ff7b09bd 169 PRINTS PR01171 Bacterial lipocalin signature 121 132 1.2E-9 T 17-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 BJD13_19285 642398bf76584110527417e3ff7b09bd 169 PRINTS PR01171 Bacterial lipocalin signature 148 158 1.2E-9 T 17-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 BJD13_19285 642398bf76584110527417e3ff7b09bd 169 PRINTS PR01171 Bacterial lipocalin signature 50 59 1.2E-9 T 17-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 BJD13_19285 642398bf76584110527417e3ff7b09bd 169 PRINTS PR01171 Bacterial lipocalin signature 13 27 1.2E-9 T 17-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 BJD13_19285 642398bf76584110527417e3ff7b09bd 169 ProSitePatterns PS00213 Lipocalin signature. 14 25 - T 17-10-2018 IPR022272 Lipocalin family conserved site BJD13_04605 2beffe02fa144f5aae157da2889c33fc 449 SUPERFAMILY SSF51556 55 377 1.29E-90 T 17-10-2018 IPR032466 Metal-dependent hydrolase BJD13_04605 2beffe02fa144f5aae157da2889c33fc 449 Gene3D G3DSA:2.30.40.10 6 431 5.3E-136 T 17-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BJD13_04605 2beffe02fa144f5aae157da2889c33fc 449 Pfam PF01979 Amidohydrolase family 51 430 3.2E-19 T 17-10-2018 IPR006680 Amidohydrolase-related GO:0016787 BJD13_04605 2beffe02fa144f5aae157da2889c33fc 449 ProSitePatterns PS00483 Dihydroorotase signature 2. 313 324 - T 17-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BJD13_04605 2beffe02fa144f5aae157da2889c33fc 449 Gene3D G3DSA:3.20.20.140 56 416 5.3E-136 T 17-10-2018 BJD13_04605 2beffe02fa144f5aae157da2889c33fc 449 SUPERFAMILY SSF51338 1 440 1.56E-31 T 17-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BJD13_24125 ca40610bd85daf1e527bf86403499d9c 987 Pfam PF13700 Domain of unknown function (DUF4158) 3 163 1.2E-35 T 17-10-2018 IPR025296 Domain of unknown function DUF4158 BJD13_24125 ca40610bd85daf1e527bf86403499d9c 987 Pfam PF01526 Tn3 transposase DDE domain 581 968 2.2E-146 T 17-10-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 BJD13_07650 f04bb474881e64f760f38a826947d237 280 Gene3D G3DSA:3.40.50.620 1 179 3.3E-70 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD13_07650 f04bb474881e64f760f38a826947d237 280 Pfam PF02569 Pantoate-beta-alanine ligase 4 278 5.8E-95 T 17-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 BJD13_07650 f04bb474881e64f760f38a826947d237 280 Gene3D G3DSA:3.30.1300.10 180 280 1.6E-26 T 17-10-2018 BJD13_07650 f04bb474881e64f760f38a826947d237 280 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 3 278 3.6E-88 T 17-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 BJD13_07650 f04bb474881e64f760f38a826947d237 280 Hamap MF_00158 Pantothenate synthetase [panC]. 3 280 38.333 T 17-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 BJD13_07650 f04bb474881e64f760f38a826947d237 280 SUPERFAMILY SSF52374 3 279 7.51E-100 T 17-10-2018 BJD13_23225 406677f35ad540d7da80a5fb27c57286 722 SMART SM00304 395 447 11.0 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_23225 406677f35ad540d7da80a5fb27c57286 722 SMART SM00304 214 266 1.2E-8 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_23225 406677f35ad540d7da80a5fb27c57286 722 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 623 652 1.3E-28 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD13_23225 406677f35ad540d7da80a5fb27c57286 722 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 575 604 1.3E-28 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD13_23225 406677f35ad540d7da80a5fb27c57286 722 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 462 491 1.3E-28 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD13_23225 406677f35ad540d7da80a5fb27c57286 722 Gene3D G3DSA:1.10.287.950 394 697 1.3E-85 T 17-10-2018 BJD13_23225 406677f35ad540d7da80a5fb27c57286 722 Gene3D G3DSA:1.20.120.1530 206 352 5.8E-39 T 17-10-2018 BJD13_23225 406677f35ad540d7da80a5fb27c57286 722 SUPERFAMILY SSF158472 214 265 7.19E-9 T 17-10-2018 BJD13_23225 406677f35ad540d7da80a5fb27c57286 722 SMART SM00283 448 695 2.7E-92 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD13_23225 406677f35ad540d7da80a5fb27c57286 722 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 508 662 4.4E-53 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD13_23225 406677f35ad540d7da80a5fb27c57286 722 SUPERFAMILY SSF58104 415 699 1.83E-71 T 17-10-2018 BJD13_23225 406677f35ad540d7da80a5fb27c57286 722 Pfam PF00672 HAMP domain 214 262 5.7E-7 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_23225 406677f35ad540d7da80a5fb27c57286 722 Pfam PF12729 Four helix bundle sensory module for signal transduction 8 185 8.1E-12 T 17-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain BJD13_00210 80ffdece6f2de1bfe90ca111e9481f05 104 Gene3D G3DSA:1.10.238.10 42 102 4.6E-11 T 17-10-2018 BJD13_00210 80ffdece6f2de1bfe90ca111e9481f05 104 Pfam PF13202 EF hand 82 99 1.3E-4 T 17-10-2018 IPR002048 EF-hand domain GO:0005509 BJD13_00210 80ffdece6f2de1bfe90ca111e9481f05 104 Pfam PF13202 EF hand 56 74 1.3E-5 T 17-10-2018 IPR002048 EF-hand domain GO:0005509 BJD13_00210 80ffdece6f2de1bfe90ca111e9481f05 104 SUPERFAMILY SSF47473 55 100 3.62E-10 T 17-10-2018 IPR011992 EF-hand domain pair BJD13_00210 80ffdece6f2de1bfe90ca111e9481f05 104 ProSitePatterns PS00018 EF-hand calcium-binding domain. 61 73 - T 17-10-2018 IPR018247 EF-Hand 1, calcium-binding site BJD13_22570 cadab454fac8d2ec09cb80779bbec6fe 350 SUPERFAMILY SSF53822 73 348 9.69E-70 T 17-10-2018 IPR028082 Periplasmic binding protein-like I BJD13_22570 cadab454fac8d2ec09cb80779bbec6fe 350 Gene3D G3DSA:3.40.50.2300 66 316 2.8E-70 T 17-10-2018 BJD13_22570 cadab454fac8d2ec09cb80779bbec6fe 350 ProSitePatterns PS00356 LacI-type HTH domain signature. 15 33 - T 17-10-2018 BJD13_22570 cadab454fac8d2ec09cb80779bbec6fe 350 SUPERFAMILY SSF47413 13 68 1.22E-15 T 17-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BJD13_22570 cadab454fac8d2ec09cb80779bbec6fe 350 SMART SM00354 12 82 4.6E-22 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD13_22570 cadab454fac8d2ec09cb80779bbec6fe 350 Pfam PF00356 Bacterial regulatory proteins, lacI family 14 59 1.8E-15 T 17-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BJD13_22570 cadab454fac8d2ec09cb80779bbec6fe 350 Gene3D G3DSA:1.10.260.40 4 65 9.8E-21 T 17-10-2018 BJD13_22570 cadab454fac8d2ec09cb80779bbec6fe 350 Pfam PF13377 Periplasmic binding protein-like domain 179 344 7.5E-40 T 17-10-2018 BJD13_22570 cadab454fac8d2ec09cb80779bbec6fe 350 Gene3D G3DSA:3.40.50.2300 171 300 2.8E-70 T 17-10-2018 BJD13_04600 26d6f833c86db900c3368eb248e3b4e5 280 Gene3D G3DSA:2.70.70.10 123 280 3.9E-48 T 17-10-2018 IPR011055 Duplicated hybrid motif BJD13_04600 26d6f833c86db900c3368eb248e3b4e5 280 Pfam PF01551 Peptidase family M23 177 272 3.3E-29 T 17-10-2018 IPR016047 Peptidase M23 BJD13_04600 26d6f833c86db900c3368eb248e3b4e5 280 SUPERFAMILY SSF51261 48 276 5.62E-55 T 17-10-2018 IPR011055 Duplicated hybrid motif BJD13_21285 c89ddb1a8f27530bf27118c4eff67677 419 Pfam PF12821 Threonine/Serine exporter, ThrE 289 409 2.2E-12 T 17-10-2018 IPR024528 Threonine/Serine exporter, ThrE BJD13_21285 c89ddb1a8f27530bf27118c4eff67677 419 Pfam PF06738 Putative threonine/serine exporter 21 263 5.8E-54 T 17-10-2018 IPR010619 Putative threonine/serine exporter BJD13_13670 44d45eae378ea102f9f7736496804399 309 SUPERFAMILY SSF55781 26 169 5.05E-21 T 17-10-2018 BJD13_13670 44d45eae378ea102f9f7736496804399 309 Pfam PF01590 GAF domain 27 153 2.7E-7 T 17-10-2018 IPR003018 GAF domain GO:0005515 BJD13_13670 44d45eae378ea102f9f7736496804399 309 Gene3D G3DSA:3.30.450.40 23 171 2.2E-14 T 17-10-2018 IPR029016 GAF-like domain superfamily BJD13_13670 44d45eae378ea102f9f7736496804399 309 SMART SM00065 25 168 4.2E-5 T 17-10-2018 IPR003018 GAF domain GO:0005515 BJD13_10115 7fea2c3e0c8f709729f170b4d8d5b4b1 175 Gene3D G3DSA:3.10.180.10 1 169 8.3E-25 T 17-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD13_10115 7fea2c3e0c8f709729f170b4d8d5b4b1 175 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 140 7.4E-11 T 17-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BJD13_10115 7fea2c3e0c8f709729f170b4d8d5b4b1 175 SUPERFAMILY SSF54593 1 145 5.5E-22 T 17-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD13_17530 595da6003b3bc64bade7de2ea4ccda4e 271 SUPERFAMILY SSF81624 2 140 1.96E-42 T 17-10-2018 IPR035937 MutM-like, N-terminal BJD13_17530 595da6003b3bc64bade7de2ea4ccda4e 271 SMART SM01232 131 223 6.2E-48 T 17-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 BJD13_17530 595da6003b3bc64bade7de2ea4ccda4e 271 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 115 5.5E-34 T 17-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 BJD13_17530 595da6003b3bc64bade7de2ea4ccda4e 271 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 270 1.5E-88 T 17-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 BJD13_17530 595da6003b3bc64bade7de2ea4ccda4e 271 Gene3D G3DSA:3.20.190.10 2 130 6.8E-41 T 17-10-2018 IPR035937 MutM-like, N-terminal BJD13_17530 595da6003b3bc64bade7de2ea4ccda4e 271 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 271 43.892 T 17-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 BJD13_17530 595da6003b3bc64bade7de2ea4ccda4e 271 SUPERFAMILY SSF46946 132 223 1.77E-29 T 17-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 BJD13_17530 595da6003b3bc64bade7de2ea4ccda4e 271 SUPERFAMILY SSF57716 219 270 6.56E-15 T 17-10-2018 BJD13_17530 595da6003b3bc64bade7de2ea4ccda4e 271 Gene3D G3DSA:1.10.8.50 133 271 6.6E-45 T 17-10-2018 BJD13_17530 595da6003b3bc64bade7de2ea4ccda4e 271 SMART SM00898 2 117 3.0E-56 T 17-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 BJD13_17530 595da6003b3bc64bade7de2ea4ccda4e 271 ProSitePatterns PS01242 Zinc finger FPG-type signature. 246 270 - T 17-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 BJD13_17530 595da6003b3bc64bade7de2ea4ccda4e 271 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 131 220 4.5E-24 T 17-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 BJD13_17530 595da6003b3bc64bade7de2ea4ccda4e 271 Pfam PF06827 Zinc finger found in FPG and IleRS 243 270 1.4E-6 T 17-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 BJD13_11970 fb2a9cd6a5549d18ba37e65c51b04fa0 121 SUPERFAMILY SSF48300 4 58 2.09E-16 T 17-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_11970 fb2a9cd6a5549d18ba37e65c51b04fa0 121 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 121 23.861 T 17-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_11970 fb2a9cd6a5549d18ba37e65c51b04fa0 121 SUPERFAMILY SSF54736 51 121 1.45E-23 T 17-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like BJD13_11970 fb2a9cd6a5549d18ba37e65c51b04fa0 121 Gene3D G3DSA:1.20.5.710 2 51 2.9E-23 T 17-10-2018 BJD13_11970 fb2a9cd6a5549d18ba37e65c51b04fa0 121 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 56 121 1.3E-26 T 17-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_11970 fb2a9cd6a5549d18ba37e65c51b04fa0 121 Gene3D G3DSA:3.30.1390.10 52 121 4.9E-27 T 17-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like BJD13_11970 fb2a9cd6a5549d18ba37e65c51b04fa0 121 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 48 2.0E-18 T 17-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_11970 fb2a9cd6a5549d18ba37e65c51b04fa0 121 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 58 121 7.0E-28 T 17-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_11970 fb2a9cd6a5549d18ba37e65c51b04fa0 121 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 121 5.7E-43 T 17-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_06770 049ee9744aba05375bcdbc51b62e8ad8 1033 SUPERFAMILY SSF56935 47 423 6.87E-37 T 17-10-2018 BJD13_06770 049ee9744aba05375bcdbc51b62e8ad8 1033 SUPERFAMILY SSF56935 420 1033 1.85E-48 T 17-10-2018 BJD13_06770 049ee9744aba05375bcdbc51b62e8ad8 1033 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 52 1033 7.6E-257 T 17-10-2018 IPR010104 Bacterial TonB-dependent receptor BJD13_06770 049ee9744aba05375bcdbc51b62e8ad8 1033 Gene3D G3DSA:2.170.130.10 43 184 2.7E-18 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_06770 049ee9744aba05375bcdbc51b62e8ad8 1033 Pfam PF00593 TonB dependent receptor 478 1032 2.9E-39 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_06770 049ee9744aba05375bcdbc51b62e8ad8 1033 Pfam PF07715 TonB-dependent Receptor Plug Domain 71 179 7.9E-16 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_00960 a3742af87bb91d5803ad28e625f3869c 114 Pfam PF13223 Protein of unknown function (DUF4031) 3 80 4.7E-11 T 17-10-2018 IPR025109 Domain of unknown function DUF4031 BJD13_19185 814deb6f322cf283056a58d24bfc21b8 394 Pfam PF00512 His Kinase A (phospho-acceptor) domain 167 231 1.1E-14 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_19185 814deb6f322cf283056a58d24bfc21b8 394 PRINTS PR00344 Bacterial sensor protein C-terminal signature 334 344 1.5E-8 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_19185 814deb6f322cf283056a58d24bfc21b8 394 PRINTS PR00344 Bacterial sensor protein C-terminal signature 316 330 1.5E-8 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_19185 814deb6f322cf283056a58d24bfc21b8 394 PRINTS PR00344 Bacterial sensor protein C-terminal signature 348 366 1.5E-8 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_19185 814deb6f322cf283056a58d24bfc21b8 394 SUPERFAMILY SSF55874 220 385 6.16E-30 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_19185 814deb6f322cf283056a58d24bfc21b8 394 SUPERFAMILY SSF47384 149 231 1.02E-17 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD13_19185 814deb6f322cf283056a58d24bfc21b8 394 SMART SM00304 113 165 0.0011 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_19185 814deb6f322cf283056a58d24bfc21b8 394 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 279 384 1.2E-13 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_19185 814deb6f322cf283056a58d24bfc21b8 394 Gene3D G3DSA:1.10.287.130 117 229 9.7E-23 T 17-10-2018 BJD13_19185 814deb6f322cf283056a58d24bfc21b8 394 SMART SM00387 275 389 6.3E-25 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_19185 814deb6f322cf283056a58d24bfc21b8 394 Gene3D G3DSA:3.30.565.10 230 386 4.8E-27 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_19185 814deb6f322cf283056a58d24bfc21b8 394 SMART SM00388 166 231 7.3E-16 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_16605 039c9602011ab206b4d9c0cbcb45a7b0 356 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 185 354 2.9E-53 T 17-10-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 BJD13_16605 039c9602011ab206b4d9c0cbcb45a7b0 356 SUPERFAMILY SSF55486 74 354 4.03E-85 T 17-10-2018 BJD13_16605 039c9602011ab206b4d9c0cbcb45a7b0 356 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 74 182 1.9E-31 T 17-10-2018 IPR013856 Peptidase M4 domain GO:0004222 BJD13_16605 039c9602011ab206b4d9c0cbcb45a7b0 356 Gene3D G3DSA:1.10.390.10 187 355 5.2E-66 T 17-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily BJD13_16605 039c9602011ab206b4d9c0cbcb45a7b0 356 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 194 205 3.2E-28 T 17-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 BJD13_16605 039c9602011ab206b4d9c0cbcb45a7b0 356 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 275 291 3.2E-28 T 17-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 BJD13_16605 039c9602011ab206b4d9c0cbcb45a7b0 356 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 173 189 3.2E-28 T 17-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 BJD13_16605 039c9602011ab206b4d9c0cbcb45a7b0 356 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 137 157 3.2E-28 T 17-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 BJD13_16605 039c9602011ab206b4d9c0cbcb45a7b0 356 Gene3D G3DSA:3.10.170.10 5 186 1.0E-66 T 17-10-2018 BJD13_21965 783491e2f0dbe84451eb2a196b121bf8 418 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 256 278 1.4E-9 T 17-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BJD13_21965 783491e2f0dbe84451eb2a196b121bf8 418 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 176 192 1.4E-9 T 17-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BJD13_21965 783491e2f0dbe84451eb2a196b121bf8 418 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 8 27 1.4E-9 T 17-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BJD13_21965 783491e2f0dbe84451eb2a196b121bf8 418 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 134 151 1.4E-9 T 17-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BJD13_21965 783491e2f0dbe84451eb2a196b121bf8 418 PIRSF PIRSF036483 2 417 3.4E-218 T 17-10-2018 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 GO:0006096|GO:0047334 KEGG: 00010+2.7.1.90|KEGG: 00030+2.7.1.90|KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042 BJD13_21965 783491e2f0dbe84451eb2a196b121bf8 418 Gene3D G3DSA:3.40.50.460 139 385 3.9E-142 T 17-10-2018 BJD13_21965 783491e2f0dbe84451eb2a196b121bf8 418 Hamap MF_01978 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 3 398 44.507 T 17-10-2018 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 GO:0006096|GO:0047334 KEGG: 00010+2.7.1.90|KEGG: 00030+2.7.1.90|KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042 BJD13_21965 783491e2f0dbe84451eb2a196b121bf8 418 Pfam PF00365 Phosphofructokinase 10 321 1.6E-48 T 17-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BJD13_21965 783491e2f0dbe84451eb2a196b121bf8 418 SUPERFAMILY SSF53784 5 416 3.53E-103 T 17-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BJD13_21965 783491e2f0dbe84451eb2a196b121bf8 418 Gene3D G3DSA:3.40.50.450 5 394 3.9E-142 T 17-10-2018 BJD13_08980 0bc32a23923469f5c8ec6de4202631e6 589 Pfam PF00005 ABC transporter 366 515 1.8E-32 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD13_08980 0bc32a23923469f5c8ec6de4202631e6 589 Gene3D G3DSA:3.40.50.300 340 588 5.0E-93 T 17-10-2018 BJD13_08980 0bc32a23923469f5c8ec6de4202631e6 589 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD13_08980 0bc32a23923469f5c8ec6de4202631e6 589 SMART SM00382 375 561 3.2E-20 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_08980 0bc32a23923469f5c8ec6de4202631e6 589 Gene3D G3DSA:1.20.1560.10 14 334 2.2E-80 T 17-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BJD13_08980 0bc32a23923469f5c8ec6de4202631e6 589 TIGRFAM TIGR02204 MsbA_rel: ABC transporter, permease/ATP-binding protein 14 586 3.6E-263 T 17-10-2018 IPR011918 ABC transporter, ATP-binding/permease protein BJD13_08980 0bc32a23923469f5c8ec6de4202631e6 589 SUPERFAMILY SSF90123 19 329 4.19E-72 T 17-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BJD13_08980 0bc32a23923469f5c8ec6de4202631e6 589 Pfam PF00664 ABC transporter transmembrane region 35 296 1.7E-46 T 17-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 BJD13_08980 0bc32a23923469f5c8ec6de4202631e6 589 SUPERFAMILY SSF52540 340 586 3.45E-89 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_12820 19b2284d27fb5cefff66968d2ac556dd 477 Pfam PF08245 Mur ligase middle domain 120 299 1.0E-27 T 17-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 BJD13_12820 19b2284d27fb5cefff66968d2ac556dd 477 Gene3D G3DSA:3.40.1190.10 104 316 1.4E-81 T 17-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BJD13_12820 19b2284d27fb5cefff66968d2ac556dd 477 Gene3D G3DSA:3.90.190.20 317 473 1.2E-45 T 17-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BJD13_12820 19b2284d27fb5cefff66968d2ac556dd 477 SUPERFAMILY SSF53623 101 317 3.92E-70 T 17-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BJD13_12820 19b2284d27fb5cefff66968d2ac556dd 477 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 18 467 4.2E-162 T 17-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BJD13_12820 19b2284d27fb5cefff66968d2ac556dd 477 Pfam PF01225 Mur ligase family, catalytic domain 18 115 6.3E-27 T 17-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 BJD13_12820 19b2284d27fb5cefff66968d2ac556dd 477 SUPERFAMILY SSF53244 319 468 9.34E-44 T 17-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BJD13_12820 19b2284d27fb5cefff66968d2ac556dd 477 Pfam PF02875 Mur ligase family, glutamate ligase domain 333 410 2.8E-18 T 17-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 BJD13_12820 19b2284d27fb5cefff66968d2ac556dd 477 Gene3D G3DSA:3.40.50.720 17 102 4.7E-32 T 17-10-2018 BJD13_12820 19b2284d27fb5cefff66968d2ac556dd 477 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 15 473 43.326 T 17-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BJD13_12820 19b2284d27fb5cefff66968d2ac556dd 477 SUPERFAMILY SSF51984 17 102 5.36E-28 T 17-10-2018 BJD13_21725 1960b0edee250769ef7f50c43a25e747 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 218 1.7E-16 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD13_21725 1960b0edee250769ef7f50c43a25e747 233 Gene3D G3DSA:1.10.10.10 122 226 9.2E-25 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_21725 1960b0edee250769ef7f50c43a25e747 233 Pfam PF00072 Response regulator receiver domain 4 111 4.3E-24 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_21725 1960b0edee250769ef7f50c43a25e747 233 Gene3D G3DSA:3.40.50.2300 1 121 6.5E-35 T 17-10-2018 BJD13_21725 1960b0edee250769ef7f50c43a25e747 233 SUPERFAMILY SSF52172 1 176 1.38E-36 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_21725 1960b0edee250769ef7f50c43a25e747 233 SMART SM00448 1 112 3.7E-32 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_21725 1960b0edee250769ef7f50c43a25e747 233 SMART SM00862 145 218 1.2E-18 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD13_14385 295bc7c0de61b5f59e73944d99bb9a20 149 Pfam PF04519 Polymer-forming cytoskeletal 16 116 1.7E-25 T 17-10-2018 IPR007607 Bactofilin A/B BJD13_14205 3bd739b4f12e495cb6a1a719321b6a61 772 Pfam PF13899 Thioredoxin-like 669 747 5.3E-13 T 17-10-2018 BJD13_14205 3bd739b4f12e495cb6a1a719321b6a61 772 SUPERFAMILY SSF74863 199 315 1.57E-30 T 17-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily BJD13_14205 3bd739b4f12e495cb6a1a719321b6a61 772 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 383 562 7.6E-12 T 17-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 BJD13_14205 3bd739b4f12e495cb6a1a719321b6a61 772 ProSitePatterns PS00194 Thioredoxin family active site. 680 698 - T 17-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 BJD13_14205 3bd739b4f12e495cb6a1a719321b6a61 772 Gene3D G3DSA:3.40.30.10 663 772 7.1E-12 T 17-10-2018 BJD13_14205 3bd739b4f12e495cb6a1a719321b6a61 772 SUPERFAMILY SSF74863 36 153 2.48E-35 T 17-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily BJD13_14205 3bd739b4f12e495cb6a1a719321b6a61 772 SUPERFAMILY SSF52833 669 768 3.97E-12 T 17-10-2018 IPR036249 Thioredoxin-like superfamily BJD13_14205 3bd739b4f12e495cb6a1a719321b6a61 772 Pfam PF11412 Disulphide bond corrector protein DsbC 199 314 6.5E-31 T 17-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain BJD13_14205 3bd739b4f12e495cb6a1a719321b6a61 772 Pfam PF11412 Disulphide bond corrector protein DsbC 38 152 2.2E-35 T 17-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain BJD13_14205 3bd739b4f12e495cb6a1a719321b6a61 772 Gene3D G3DSA:2.60.40.1250 191 331 4.7E-35 T 17-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily BJD13_14205 3bd739b4f12e495cb6a1a719321b6a61 772 Gene3D G3DSA:2.60.40.1250 31 169 1.3E-42 T 17-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily BJD13_07860 b0d519123b20485a04889349df017915 233 Pfam PF02678 Pirin 7 119 1.3E-32 T 17-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 BJD13_07860 b0d519123b20485a04889349df017915 233 SUPERFAMILY SSF51182 1 232 1.78E-73 T 17-10-2018 IPR011051 RmlC-like cupin domain superfamily BJD13_07860 b0d519123b20485a04889349df017915 233 PIRSF PIRSF006232 1 230 4.3E-53 T 17-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 BJD13_07860 b0d519123b20485a04889349df017915 233 Gene3D G3DSA:2.60.120.10 12 132 5.4E-58 T 17-10-2018 IPR014710 RmlC-like jelly roll fold BJD13_07860 b0d519123b20485a04889349df017915 233 Gene3D G3DSA:2.60.120.10 133 233 3.7E-32 T 17-10-2018 IPR014710 RmlC-like jelly roll fold BJD13_22685 bc7d2f90db756a33fc36a2d2326bcaee 201 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 3 199 26.404 T 17-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 BJD13_22685 bc7d2f90db756a33fc36a2d2326bcaee 201 Pfam PF01121 Dephospho-CoA kinase 5 181 1.9E-57 T 17-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 BJD13_22685 bc7d2f90db756a33fc36a2d2326bcaee 201 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 5 185 2.6E-47 T 17-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 BJD13_22685 bc7d2f90db756a33fc36a2d2326bcaee 201 Gene3D G3DSA:3.40.50.300 2 201 8.0E-61 T 17-10-2018 BJD13_22685 bc7d2f90db756a33fc36a2d2326bcaee 201 SUPERFAMILY SSF52540 1 189 5.42E-34 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_07890 f210f1c936e4c438942e13d193c070d5 162 Gene3D G3DSA:1.10.10.10 111 162 6.0E-27 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_07890 f210f1c936e4c438942e13d193c070d5 162 Hamap MF_01114 Regulatory protein RecX [recX]. 11 162 14.393 T 17-10-2018 IPR003783 Regulatory protein RecX GO:0006282 BJD13_07890 f210f1c936e4c438942e13d193c070d5 162 Gene3D G3DSA:1.10.10.10 17 64 1.6E-25 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_07890 f210f1c936e4c438942e13d193c070d5 162 Gene3D G3DSA:1.10.10.10 65 110 8.6E-18 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_07890 f210f1c936e4c438942e13d193c070d5 162 Pfam PF02631 RecX family 41 156 4.5E-27 T 17-10-2018 IPR003783 Regulatory protein RecX GO:0006282 BJD13_12795 da3c862f26d2c6364c4fdd3e4a07339d 303 Gene3D G3DSA:3.30.1700.10 128 302 8.8E-65 T 17-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 BJD13_12795 da3c862f26d2c6364c4fdd3e4a07339d 303 SUPERFAMILY SSF54211 3 125 2.43E-42 T 17-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BJD13_12795 da3c862f26d2c6364c4fdd3e4a07339d 303 Gene3D G3DSA:3.30.230.20 1 127 1.1E-48 T 17-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 BJD13_12795 da3c862f26d2c6364c4fdd3e4a07339d 303 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 279 46.002 T 17-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 BJD13_12795 da3c862f26d2c6364c4fdd3e4a07339d 303 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 3 294 2.6E-118 T 17-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 BJD13_12795 da3c862f26d2c6364c4fdd3e4a07339d 303 SUPERFAMILY SSF54211 133 277 5.61E-51 T 17-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BJD13_12795 da3c862f26d2c6364c4fdd3e4a07339d 303 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 275 2.9E-105 T 17-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 BJD13_09705 c3070dfd59f5c51d2baac54ddd32bb94 181 Pfam PF11086 Protein of unknown function (DUF2878) 4 158 5.2E-39 T 17-10-2018 IPR021306 Protein of unknown function DUF2878 BJD13_03550 d5870612a30c046fbba44d4331397988 232 Pfam PF10531 SLBB domain 127 179 8.8E-9 T 17-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_03550 d5870612a30c046fbba44d4331397988 232 Pfam PF02563 Polysaccharide biosynthesis/export protein 45 120 9.9E-20 T 17-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 BJD13_03550 d5870612a30c046fbba44d4331397988 232 Gene3D G3DSA:3.10.560.10 103 208 3.3E-15 T 17-10-2018 BJD13_02185 6f983565c171e89eefa88dacca0f6697 394 Gene3D G3DSA:3.40.50.1820 19 169 3.0E-7 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_02185 6f983565c171e89eefa88dacca0f6697 394 SUPERFAMILY SSF53474 85 178 1.85E-14 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_02185 6f983565c171e89eefa88dacca0f6697 394 Pfam PF11187 Protein of unknown function (DUF2974) 76 158 1.2E-7 T 17-10-2018 IPR024499 Protein of unknown function DUF2974 BJD13_18540 c920351174f270ed4c9bd8a37fabffe9 335 Gene3D G3DSA:3.30.1330.40 211 334 5.6E-13 T 17-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 BJD13_18540 c920351174f270ed4c9bd8a37fabffe9 335 SUPERFAMILY SSF55298 232 332 7.24E-8 T 17-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 BJD13_03855 86c44e05d4ca95b7396d8fbd7d99ce8e 168 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 7 163 35.878 T 17-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 BJD13_03855 86c44e05d4ca95b7396d8fbd7d99ce8e 168 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 8 160 8.6E-58 T 17-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 BJD13_03855 86c44e05d4ca95b7396d8fbd7d99ce8e 168 Gene3D G3DSA:3.40.50.620 1 165 1.7E-55 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD13_03855 86c44e05d4ca95b7396d8fbd7d99ce8e 168 Pfam PF01467 Cytidylyltransferase-like 10 138 3.9E-22 T 17-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 BJD13_03855 86c44e05d4ca95b7396d8fbd7d99ce8e 168 SUPERFAMILY SSF52374 7 161 1.18E-44 T 17-10-2018 BJD13_03855 86c44e05d4ca95b7396d8fbd7d99ce8e 168 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 9 64 3.0E-16 T 17-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 BJD13_03855 86c44e05d4ca95b7396d8fbd7d99ce8e 168 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 7 25 3.6E-48 T 17-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 BJD13_03855 86c44e05d4ca95b7396d8fbd7d99ce8e 168 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 117 139 3.6E-48 T 17-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 BJD13_03855 86c44e05d4ca95b7396d8fbd7d99ce8e 168 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 90 106 3.6E-48 T 17-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 BJD13_03855 86c44e05d4ca95b7396d8fbd7d99ce8e 168 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 54 78 3.6E-48 T 17-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 BJD13_03855 86c44e05d4ca95b7396d8fbd7d99ce8e 168 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 25 46 3.6E-48 T 17-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 BJD13_07900 86f564ab5d73241627948b4d3fb0a972 344 Pfam PF00154 recA bacterial DNA recombination protein 7 270 1.4E-139 T 17-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BJD13_07900 86f564ab5d73241627948b4d3fb0a972 344 Gene3D G3DSA:3.30.250.10 271 343 4.3E-26 T 17-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal BJD13_07900 86f564ab5d73241627948b4d3fb0a972 344 Gene3D G3DSA:3.40.50.300 30 270 1.5E-78 T 17-10-2018 BJD13_07900 86f564ab5d73241627948b4d3fb0a972 344 SUPERFAMILY SSF54752 270 327 6.93E-21 T 17-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal BJD13_07900 86f564ab5d73241627948b4d3fb0a972 344 Hamap MF_00268 Protein RecA [recA]. 5 331 50.628 T 17-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BJD13_07900 86f564ab5d73241627948b4d3fb0a972 344 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 326 5.8E-166 T 17-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BJD13_07900 86f564ab5d73241627948b4d3fb0a972 344 SUPERFAMILY SSF52540 4 269 7.09E-66 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_07900 86f564ab5d73241627948b4d3fb0a972 344 PRINTS PR00142 RecA protein signature 165 194 2.8E-85 T 17-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BJD13_07900 86f564ab5d73241627948b4d3fb0a972 344 PRINTS PR00142 RecA protein signature 212 240 2.8E-85 T 17-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BJD13_07900 86f564ab5d73241627948b4d3fb0a972 344 PRINTS PR00142 RecA protein signature 299 316 2.8E-85 T 17-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BJD13_07900 86f564ab5d73241627948b4d3fb0a972 344 PRINTS PR00142 RecA protein signature 127 156 2.8E-85 T 17-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BJD13_07900 86f564ab5d73241627948b4d3fb0a972 344 PRINTS PR00142 RecA protein signature 245 274 2.8E-85 T 17-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BJD13_07900 86f564ab5d73241627948b4d3fb0a972 344 PRINTS PR00142 RecA protein signature 93 122 2.8E-85 T 17-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BJD13_07900 86f564ab5d73241627948b4d3fb0a972 344 SMART SM00382 57 230 3.2E-11 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_07900 86f564ab5d73241627948b4d3fb0a972 344 ProSitePatterns PS00321 recA signature. 215 223 - T 17-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 BJD13_23475 a143048bad8aa2c21620560039cc3b6e 243 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 4 206 29.396 T 17-10-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 BJD13_23475 a143048bad8aa2c21620560039cc3b6e 243 Pfam PF03932 CutC family 6 204 7.2E-81 T 17-10-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 BJD13_23475 a143048bad8aa2c21620560039cc3b6e 243 SUPERFAMILY SSF110395 6 241 1.18E-66 T 17-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 BJD13_23475 a143048bad8aa2c21620560039cc3b6e 243 Gene3D G3DSA:3.20.20.380 4 242 7.9E-80 T 17-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 BJD13_17430 1e926bdc45b890d9312c6f7a6875fe60 307 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 45 234 1.4E-33 T 17-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 BJD13_17430 1e926bdc45b890d9312c6f7a6875fe60 307 Gene3D G3DSA:1.10.287.470 80 155 1.5E-35 T 17-10-2018 BJD13_17430 1e926bdc45b890d9312c6f7a6875fe60 307 Pfam PF13533 Biotin-lipoyl like 47 95 9.1E-15 T 17-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain BJD13_17430 1e926bdc45b890d9312c6f7a6875fe60 307 Gene3D G3DSA:2.40.50.100 47 190 1.5E-35 T 17-10-2018 BJD13_17430 1e926bdc45b890d9312c6f7a6875fe60 307 Pfam PF13437 HlyD family secretion protein 156 235 1.9E-14 T 17-10-2018 BJD13_17430 1e926bdc45b890d9312c6f7a6875fe60 307 SUPERFAMILY SSF111369 46 201 4.45E-23 T 17-10-2018 BJD13_17430 1e926bdc45b890d9312c6f7a6875fe60 307 Gene3D G3DSA:2.40.30.170 191 232 1.5E-35 T 17-10-2018 BJD13_06395 1e93d7a37ca2a9c0f9362d471cd1c208 214 SMART SM00858 89 151 2.4E-9 T 17-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 BJD13_06395 1e93d7a37ca2a9c0f9362d471cd1c208 214 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 77 212 2.7E-41 T 17-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal BJD13_06395 1e93d7a37ca2a9c0f9362d471cd1c208 214 Gene3D G3DSA:2.30.30.760 155 214 8.7E-12 T 17-10-2018 BJD13_06395 1e93d7a37ca2a9c0f9362d471cd1c208 214 Pfam PF13144 Chaperone for flagella basal body P-ring formation 44 212 4.7E-42 T 17-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal BJD13_06395 1e93d7a37ca2a9c0f9362d471cd1c208 214 Gene3D G3DSA:3.90.1210.10 87 154 8.7E-23 T 17-10-2018 BJD13_19395 b28616c79c7664904db7917eb4d185a7 155 Pfam PF00692 dUTPase 21 153 3.2E-33 T 17-10-2018 IPR029054 dUTPase-like BJD13_19395 b28616c79c7664904db7917eb4d185a7 155 Gene3D G3DSA:2.70.40.10 3 153 1.7E-46 T 17-10-2018 IPR036157 dUTPase-like superfamily BJD13_19395 b28616c79c7664904db7917eb4d185a7 155 SUPERFAMILY SSF51283 9 154 1.57E-48 T 17-10-2018 IPR036157 dUTPase-like superfamily BJD13_19395 b28616c79c7664904db7917eb4d185a7 155 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 10 154 32.568 T 17-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 BJD13_19395 b28616c79c7664904db7917eb4d185a7 155 TIGRFAM TIGR00576 dut: dUTP diphosphatase 21 153 3.0E-44 T 17-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 BJD13_23175 d865a1842b9f7f62044c177ad6f605b9 439 Gene3D G3DSA:2.120.10.30 168 439 1.8E-90 T 17-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like BJD13_23175 d865a1842b9f7f62044c177ad6f605b9 439 SUPERFAMILY SSF52964 34 164 7.98E-35 T 17-10-2018 BJD13_23175 d865a1842b9f7f62044c177ad6f605b9 439 Gene3D G3DSA:3.40.50.10070 24 167 4.0E-41 T 17-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 BJD13_23175 d865a1842b9f7f62044c177ad6f605b9 439 SUPERFAMILY SSF69304 157 434 3.01E-53 T 17-10-2018 BJD13_23175 d865a1842b9f7f62044c177ad6f605b9 439 Pfam PF04052 TolB amino-terminal domain 27 132 2.2E-30 T 17-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 BJD13_23175 d865a1842b9f7f62044c177ad6f605b9 439 Pfam PF07676 WD40-like Beta Propeller Repeat 284 320 1.2E-14 T 17-10-2018 IPR011659 WD40-like Beta Propeller BJD13_23175 d865a1842b9f7f62044c177ad6f605b9 439 Pfam PF07676 WD40-like Beta Propeller Repeat 243 276 1.4E-8 T 17-10-2018 IPR011659 WD40-like Beta Propeller BJD13_23175 d865a1842b9f7f62044c177ad6f605b9 439 Pfam PF07676 WD40-like Beta Propeller Repeat 209 231 7.9E-6 T 17-10-2018 IPR011659 WD40-like Beta Propeller BJD13_23175 d865a1842b9f7f62044c177ad6f605b9 439 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 21 433 1.8E-159 T 17-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 BJD13_23175 d865a1842b9f7f62044c177ad6f605b9 439 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 8 432 51.652 T 17-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 BJD13_16095 71619f07957e50dc132ad84c71c01375 190 SMART SM00867 25 185 3.7E-20 T 17-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like BJD13_16095 71619f07957e50dc132ad84c71c01375 190 Pfam PF04264 YceI-like domain 28 180 3.5E-20 T 17-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like BJD13_16095 71619f07957e50dc132ad84c71c01375 190 Gene3D G3DSA:2.40.128.110 27 184 7.7E-21 T 17-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily BJD13_16095 71619f07957e50dc132ad84c71c01375 190 SUPERFAMILY SSF101874 28 185 1.7E-26 T 17-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily BJD13_02360 ab958a5809a93ea7acc6ab27d811a8a4 294 SUPERFAMILY SSF56317 1 275 4.45E-49 T 17-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily BJD13_02360 ab958a5809a93ea7acc6ab27d811a8a4 294 Pfam PF00795 Carbon-nitrogen hydrolase 2 213 3.9E-19 T 17-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 BJD13_02360 ab958a5809a93ea7acc6ab27d811a8a4 294 Gene3D G3DSA:3.60.110.10 1 278 7.3E-46 T 17-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily BJD13_02785 2b039ec955906be1067ceb4720f2fe46 481 SUPERFAMILY SSF111283 23 479 3.14E-138 T 17-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 BJD13_02785 2b039ec955906be1067ceb4720f2fe46 481 PIRSF PIRSF004919 21 480 1.1E-143 T 17-10-2018 IPR025502 TldD BJD13_02785 2b039ec955906be1067ceb4720f2fe46 481 Gene3D G3DSA:3.30.2290.10 24 239 1.1E-24 T 17-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal BJD13_02785 2b039ec955906be1067ceb4720f2fe46 481 Pfam PF01523 Putative modulator of DNA gyrase 40 331 1.4E-76 T 17-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 BJD13_04115 4c2f35dde3e4af3f9ff72dc149a49072 459 SUPERFAMILY SSF55931 122 456 1.86E-97 T 17-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 BJD13_04115 4c2f35dde3e4af3f9ff72dc149a49072 459 Gene3D G3DSA:3.30.590.10 124 459 2.7E-98 T 17-10-2018 BJD13_04115 4c2f35dde3e4af3f9ff72dc149a49072 459 SMART SM01230 121 378 2.1E-98 T 17-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BJD13_04115 4c2f35dde3e4af3f9ff72dc149a49072 459 Pfam PF00120 Glutamine synthetase, catalytic domain 122 455 7.5E-97 T 17-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BJD13_04115 4c2f35dde3e4af3f9ff72dc149a49072 459 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 17-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 BJD13_04115 4c2f35dde3e4af3f9ff72dc149a49072 459 SUPERFAMILY SSF54368 23 118 1.03E-11 T 17-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BJD13_15815 687e8907ade01336b15d00f8d33ed13f 209 SUPERFAMILY SSF69593 20 185 9.15E-22 T 17-10-2018 BJD13_15815 687e8907ade01336b15d00f8d33ed13f 209 SMART SM00563 59 171 4.2E-25 T 17-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 BJD13_15815 687e8907ade01336b15d00f8d33ed13f 209 Pfam PF01553 Acyltransferase 59 168 7.8E-12 T 17-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 BJD13_05980 f4d6570583111a6fd684a6c18c450b47 344 Gene3D G3DSA:3.40.50.720 19 138 6.0E-35 T 17-10-2018 BJD13_05980 f4d6570583111a6fd684a6c18c450b47 344 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 21 137 1.5E-23 T 17-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 BJD13_05980 f4d6570583111a6fd684a6c18c450b47 344 Gene3D G3DSA:3.30.360.10 139 344 4.4E-47 T 17-10-2018 BJD13_05980 f4d6570583111a6fd684a6c18c450b47 344 SUPERFAMILY SSF55347 145 294 7.19E-32 T 17-10-2018 BJD13_05980 f4d6570583111a6fd684a6c18c450b47 344 SUPERFAMILY SSF51735 10 171 1.26E-48 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_23045 4c3780c1e893a368fed8b10cd67d466c 166 Pfam PF14317 YcxB-like protein 96 155 4.9E-9 T 17-10-2018 IPR025588 YcxB-like protein BJD13_03785 80b2f476669bd292994d09d3e241cd55 546 SUPERFAMILY SSF51445 60 357 6.19E-40 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily BJD13_03785 80b2f476669bd292994d09d3e241cd55 546 Pfam PF01301 Glycosyl hydrolases family 35 51 261 1.4E-8 T 17-10-2018 IPR031330 Glycoside hydrolase 35, catalytic domain KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 BJD13_03785 80b2f476669bd292994d09d3e241cd55 546 Gene3D G3DSA:2.60.220.20 398 546 2.1E-41 T 17-10-2018 BJD13_03785 80b2f476669bd292994d09d3e241cd55 546 Gene3D G3DSA:3.20.20.80 36 397 9.4E-133 T 17-10-2018 BJD13_01715 9df2efdb62b0bf9629bebae7fb2c70ca 409 SUPERFAMILY SSF51556 28 408 6.46E-48 T 17-10-2018 IPR032466 Metal-dependent hydrolase BJD13_01715 9df2efdb62b0bf9629bebae7fb2c70ca 409 Gene3D G3DSA:3.20.20.140 53 409 2.0E-59 T 17-10-2018 BJD13_01715 9df2efdb62b0bf9629bebae7fb2c70ca 409 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 64 405 2.1E-44 T 17-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 BJD13_00290 f36853fcb6663e50f85c65463eb849ef 504 Gene3D G3DSA:2.40.420.20 320 413 7.5E-22 T 17-10-2018 BJD13_00290 f36853fcb6663e50f85c65463eb849ef 504 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 111 314 8.5E-52 T 17-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BJD13_00290 f36853fcb6663e50f85c65463eb849ef 504 Gene3D G3DSA:2.40.50.100 200 241 1.5E-26 T 17-10-2018 BJD13_00290 f36853fcb6663e50f85c65463eb849ef 504 SUPERFAMILY SSF111369 131 319 2.48E-12 T 17-10-2018 BJD13_00290 f36853fcb6663e50f85c65463eb849ef 504 Gene3D G3DSA:2.40.50.100 127 178 2.5E-5 T 17-10-2018 BJD13_00290 f36853fcb6663e50f85c65463eb849ef 504 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 212 389 4.8E-39 T 17-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 BJD13_00290 f36853fcb6663e50f85c65463eb849ef 504 Gene3D G3DSA:1.10.287.470 179 199 1.5E-26 T 17-10-2018 BJD13_00290 f36853fcb6663e50f85c65463eb849ef 504 Gene3D G3DSA:2.40.30.170 242 316 1.5E-26 T 17-10-2018 BJD13_02740 60839c785d1946bbf0113bca262b914c 137 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 23 120 2.0E-37 T 17-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS BJD13_02740 60839c785d1946bbf0113bca262b914c 137 Gene3D G3DSA:3.30.460.10 19 135 2.2E-38 T 17-10-2018 BJD13_02740 60839c785d1946bbf0113bca262b914c 137 SUPERFAMILY SSF81301 21 126 8.99E-39 T 17-10-2018 BJD13_02740 60839c785d1946bbf0113bca262b914c 137 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 19 121 25.088 T 17-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS BJD13_02740 60839c785d1946bbf0113bca262b914c 137 Pfam PF02410 Ribosomal silencing factor during starvation 26 120 4.7E-28 T 17-10-2018 BJD13_18935 ae52e0c9dbcb2eb6c03e20b9f1fb05a8 227 Pfam PF00072 Response regulator receiver domain 3 113 3.4E-27 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_18935 ae52e0c9dbcb2eb6c03e20b9f1fb05a8 227 Gene3D G3DSA:1.10.10.10 123 225 8.2E-30 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_18935 ae52e0c9dbcb2eb6c03e20b9f1fb05a8 227 SMART SM00862 145 220 6.1E-26 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD13_18935 ae52e0c9dbcb2eb6c03e20b9f1fb05a8 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 3.7E-24 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD13_18935 ae52e0c9dbcb2eb6c03e20b9f1fb05a8 227 Gene3D G3DSA:3.40.50.2300 1 121 6.6E-41 T 17-10-2018 BJD13_18935 ae52e0c9dbcb2eb6c03e20b9f1fb05a8 227 SUPERFAMILY SSF52172 1 170 1.03E-39 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_18935 ae52e0c9dbcb2eb6c03e20b9f1fb05a8 227 SMART SM00448 1 112 5.0E-41 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_11840 3a9e2c34b39492b4ef4825d94694950f 119 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 4 119 1.7E-37 T 17-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_11840 3a9e2c34b39492b4ef4825d94694950f 119 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 4 119 25.762 T 17-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_11840 3a9e2c34b39492b4ef4825d94694950f 119 Gene3D G3DSA:3.30.420.100 3 119 5.0E-41 T 17-10-2018 BJD13_11840 3a9e2c34b39492b4ef4825d94694950f 119 SUPERFAMILY SSF53137 5 117 1.18E-48 T 17-10-2018 BJD13_11840 3a9e2c34b39492b4ef4825d94694950f 119 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 5 119 1.9E-36 T 17-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_03305 eafa14fb2a2313ff231485448414440a 152 Pfam PF07963 Prokaryotic N-terminal methylation motif 8 31 4.4E-6 T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD13_03305 eafa14fb2a2313ff231485448414440a 152 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD13_03305 eafa14fb2a2313ff231485448414440a 152 TIGRFAM TIGR02523 type_IV_pilV: type IV pilus modification protein PilV 10 80 2.3E-16 T 17-10-2018 IPR013362 Pilus modification type IV, PilV BJD13_24100 0a89b8aa8ec7c7f6939eb35d9e2345e4 83 Gene3D G3DSA:2.10.260.10 2 44 5.7E-6 T 17-10-2018 BJD13_24100 0a89b8aa8ec7c7f6939eb35d9e2345e4 83 SUPERFAMILY SSF89447 1 41 3.49E-6 T 17-10-2018 IPR037914 SpoVT-AbrB domain superfamily BJD13_24100 0a89b8aa8ec7c7f6939eb35d9e2345e4 83 SMART SM00966 4 50 1.2E-4 T 17-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 BJD13_01565 0a89b8aa8ec7c7f6939eb35d9e2345e4 83 Gene3D G3DSA:2.10.260.10 2 44 5.7E-6 T 17-10-2018 BJD13_01565 0a89b8aa8ec7c7f6939eb35d9e2345e4 83 SUPERFAMILY SSF89447 1 41 3.49E-6 T 17-10-2018 IPR037914 SpoVT-AbrB domain superfamily BJD13_01565 0a89b8aa8ec7c7f6939eb35d9e2345e4 83 SMART SM00966 4 50 1.2E-4 T 17-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 BJD13_09945 b9136868051eacd16fe384078e285969 344 Gene3D G3DSA:3.90.660.10 56 296 2.2E-100 T 17-10-2018 BJD13_09945 b9136868051eacd16fe384078e285969 344 Gene3D G3DSA:3.50.50.60 18 331 2.2E-100 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_09945 b9136868051eacd16fe384078e285969 344 Pfam PF13450 NAD(P)-binding Rossmann-like domain 20 82 1.9E-16 T 17-10-2018 BJD13_09945 b9136868051eacd16fe384078e285969 344 PRINTS PR00419 Adrenodoxin reductase family signature 17 39 2.2E-7 T 17-10-2018 BJD13_09945 b9136868051eacd16fe384078e285969 344 PRINTS PR00419 Adrenodoxin reductase family signature 40 53 2.2E-7 T 17-10-2018 BJD13_09945 b9136868051eacd16fe384078e285969 344 SUPERFAMILY SSF51905 14 333 5.5E-35 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_15115 ac9901954b4a890ea58fe3ff4dc7f547 402 ProSitePatterns PS00099 Thiolases active site. 383 396 - T 17-10-2018 IPR020610 Thiolase, active site GO:0016747 BJD13_15115 ac9901954b4a890ea58fe3ff4dc7f547 402 TIGRFAM TIGR02430 pcaF: 3-oxoadipyl-CoA thiolase 3 402 1.7E-217 T 17-10-2018 IPR012793 Beta-ketoadipyl CoA thiolase GO:0016747|GO:0019619 KEGG: 00360+2.3.1.174|KEGG: 00362+2.3.1.174|MetaCyc: PWY-1361|MetaCyc: PWY-2361|MetaCyc: PWY-6185 BJD13_15115 ac9901954b4a890ea58fe3ff4dc7f547 402 Gene3D G3DSA:3.40.47.10 7 283 3.0E-152 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 BJD13_15115 ac9901954b4a890ea58fe3ff4dc7f547 402 PIRSF PIRSF000429 1 402 3.8E-130 T 17-10-2018 IPR002155 Thiolase GO:0016747 BJD13_15115 ac9901954b4a890ea58fe3ff4dc7f547 402 Pfam PF00108 Thiolase, N-terminal domain 4 269 3.5E-80 T 17-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 BJD13_15115 ac9901954b4a890ea58fe3ff4dc7f547 402 ProSitePatterns PS00737 Thiolases signature 2. 348 364 - T 17-10-2018 IPR020613 Thiolase, conserved site GO:0016747 BJD13_15115 ac9901954b4a890ea58fe3ff4dc7f547 402 SUPERFAMILY SSF53901 278 401 5.51E-42 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 BJD13_15115 ac9901954b4a890ea58fe3ff4dc7f547 402 Gene3D G3DSA:3.40.47.10 141 398 3.0E-152 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 BJD13_15115 ac9901954b4a890ea58fe3ff4dc7f547 402 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 400 3.4E-138 T 17-10-2018 IPR002155 Thiolase GO:0016747 BJD13_15115 ac9901954b4a890ea58fe3ff4dc7f547 402 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 17-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 BJD13_15115 ac9901954b4a890ea58fe3ff4dc7f547 402 SUPERFAMILY SSF53901 3 277 2.25E-79 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 BJD13_15115 ac9901954b4a890ea58fe3ff4dc7f547 402 Pfam PF02803 Thiolase, C-terminal domain 278 401 2.3E-41 T 17-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 BJD13_02085 4e3a02a5f519078c13a9ab15b26b9cba 292 Pfam PF02567 Phenazine biosynthesis-like protein 9 286 1.4E-55 T 17-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 BJD13_02085 4e3a02a5f519078c13a9ab15b26b9cba 292 Gene3D G3DSA:3.10.310.10 128 284 4.8E-79 T 17-10-2018 BJD13_02085 4e3a02a5f519078c13a9ab15b26b9cba 292 SUPERFAMILY SSF54506 3 290 7.07E-71 T 17-10-2018 BJD13_02085 4e3a02a5f519078c13a9ab15b26b9cba 292 Gene3D G3DSA:3.10.310.10 8 286 4.8E-79 T 17-10-2018 BJD13_02085 4e3a02a5f519078c13a9ab15b26b9cba 292 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 5 290 5.2E-61 T 17-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 BJD13_02085 4e3a02a5f519078c13a9ab15b26b9cba 292 PIRSF PIRSF016184 1 291 6.0E-95 T 17-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 BJD13_03180 20f30aa2cfb074ad3507a928a7d03a59 101 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 101 19.628 T 17-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 BJD13_03180 20f30aa2cfb074ad3507a928a7d03a59 101 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 8 96 1.4E-22 T 17-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like BJD13_13365 ef62dc6750d8fb0edb0dc1cf1fc67068 92 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 4 92 19.439 T 17-10-2018 IPR007454 Uncharacterised protein family UPF0250 BJD13_13365 ef62dc6750d8fb0edb0dc1cf1fc67068 92 Gene3D G3DSA:3.30.70.260 5 92 2.5E-14 T 17-10-2018 BJD13_13365 ef62dc6750d8fb0edb0dc1cf1fc67068 92 Pfam PF04359 Protein of unknown function (DUF493) 11 92 1.6E-20 T 17-10-2018 IPR007454 Uncharacterised protein family UPF0250 BJD13_13365 ef62dc6750d8fb0edb0dc1cf1fc67068 92 SUPERFAMILY SSF117991 6 92 1.1E-18 T 17-10-2018 IPR027471 YbeD-like domain superfamily BJD13_01475 c13bae071513f2c9358c365d32f4ab0d 93 Pfam PF13744 Helix-turn-helix domain 13 89 4.6E-25 T 17-10-2018 IPR039554 HigA2-like, helix-turn-helix domain BJD13_01475 c13bae071513f2c9358c365d32f4ab0d 93 SUPERFAMILY SSF47413 19 89 4.97E-21 T 17-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BJD13_01475 c13bae071513f2c9358c365d32f4ab0d 93 Gene3D G3DSA:1.10.260.40 10 93 2.1E-27 T 17-10-2018 BJD13_01475 c13bae071513f2c9358c365d32f4ab0d 93 SMART SM00530 32 90 0.0012 T 17-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BJD13_10495 c9456b40001633d487832610c0b0ede8 224 Gene3D G3DSA:1.10.1670.40 15 207 7.0E-59 T 17-10-2018 BJD13_10495 c9456b40001633d487832610c0b0ede8 224 Gene3D G3DSA:1.10.340.30 43 157 7.0E-59 T 17-10-2018 BJD13_10495 c9456b40001633d487832610c0b0ede8 224 SMART SM00478 55 210 1.2E-10 T 17-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 BJD13_10495 c9456b40001633d487832610c0b0ede8 224 SUPERFAMILY SSF48150 38 208 5.41E-37 T 17-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 BJD13_10495 c9456b40001633d487832610c0b0ede8 224 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 52 194 8.8E-14 T 17-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 BJD13_04420 2c77f1a4390e355b5a91f7196c779a20 299 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 9 108 8.5E-25 T 17-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 BJD13_04420 2c77f1a4390e355b5a91f7196c779a20 299 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 123 232 2.7E-21 T 17-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 BJD13_04420 2c77f1a4390e355b5a91f7196c779a20 299 Gene3D G3DSA:3.40.50.620 6 281 1.2E-94 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD13_04420 2c77f1a4390e355b5a91f7196c779a20 299 Gene3D G3DSA:3.40.50.620 81 216 1.2E-94 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD13_04420 2c77f1a4390e355b5a91f7196c779a20 299 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 6 288 40.891 T 17-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 BJD13_04420 2c77f1a4390e355b5a91f7196c779a20 299 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 6 267 4.1E-102 T 17-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 BJD13_04420 2c77f1a4390e355b5a91f7196c779a20 299 PRINTS PR00987 Glutamyl-tRNA synthetase signature 9 21 4.1E-13 T 17-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BJD13_04420 2c77f1a4390e355b5a91f7196c779a20 299 PRINTS PR00987 Glutamyl-tRNA synthetase signature 23 34 4.1E-13 T 17-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BJD13_04420 2c77f1a4390e355b5a91f7196c779a20 299 PRINTS PR00987 Glutamyl-tRNA synthetase signature 168 178 4.1E-13 T 17-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BJD13_04420 2c77f1a4390e355b5a91f7196c779a20 299 PRINTS PR00987 Glutamyl-tRNA synthetase signature 184 192 4.1E-13 T 17-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BJD13_04420 2c77f1a4390e355b5a91f7196c779a20 299 PRINTS PR00987 Glutamyl-tRNA synthetase signature 38 51 4.1E-13 T 17-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BJD13_04420 2c77f1a4390e355b5a91f7196c779a20 299 SUPERFAMILY SSF52374 6 279 9.85E-81 T 17-10-2018 BJD13_13640 a3809204d9ae2e6ecf24141bb2f2483d 326 SUPERFAMILY SSF55073 150 304 8.63E-41 T 17-10-2018 IPR029787 Nucleotide cyclase BJD13_13640 a3809204d9ae2e6ecf24141bb2f2483d 326 Gene3D G3DSA:3.30.70.270 143 311 8.0E-50 T 17-10-2018 BJD13_13640 a3809204d9ae2e6ecf24141bb2f2483d 326 SMART SM00267 134 304 1.0E-41 T 17-10-2018 IPR000160 GGDEF domain BJD13_13640 a3809204d9ae2e6ecf24141bb2f2483d 326 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 144 303 1.1E-39 T 17-10-2018 IPR000160 GGDEF domain BJD13_13640 a3809204d9ae2e6ecf24141bb2f2483d 326 Pfam PF00990 Diguanylate cyclase, GGDEF domain 145 300 1.6E-36 T 17-10-2018 IPR000160 GGDEF domain BJD13_19045 ba0db0bc99d801f1bc607978e0d4b69e 340 SUPERFAMILY SSF56281 34 293 4.06E-50 T 17-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BJD13_19045 ba0db0bc99d801f1bc607978e0d4b69e 340 SMART SM00849 47 252 5.5E-28 T 17-10-2018 IPR001279 Metallo-beta-lactamase BJD13_19045 ba0db0bc99d801f1bc607978e0d4b69e 340 Pfam PF00753 Metallo-beta-lactamase superfamily 50 218 7.1E-24 T 17-10-2018 IPR001279 Metallo-beta-lactamase BJD13_19045 ba0db0bc99d801f1bc607978e0d4b69e 340 Gene3D G3DSA:3.60.15.10 33 284 1.1E-59 T 17-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BJD13_10595 f531496fe07a67f9d60938de041dd1c7 719 SMART SM00382 514 698 2.6E-16 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_10595 f531496fe07a67f9d60938de041dd1c7 719 Pfam PF00664 ABC transporter transmembrane region 176 440 8.0E-30 T 17-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 BJD13_10595 f531496fe07a67f9d60938de041dd1c7 719 Pfam PF00005 ABC transporter 505 654 7.0E-32 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD13_10595 f531496fe07a67f9d60938de041dd1c7 719 Gene3D G3DSA:3.40.50.300 480 718 1.1E-69 T 17-10-2018 BJD13_10595 f531496fe07a67f9d60938de041dd1c7 719 Pfam PF03412 Peptidase C39 family 18 145 3.8E-35 T 17-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 BJD13_10595 f531496fe07a67f9d60938de041dd1c7 719 SUPERFAMILY SSF52540 482 701 9.5E-64 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_10595 f531496fe07a67f9d60938de041dd1c7 719 SUPERFAMILY SSF90123 169 475 3.14E-52 T 17-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BJD13_10595 f531496fe07a67f9d60938de041dd1c7 719 Gene3D G3DSA:3.90.70.10 8 152 5.1E-37 T 17-10-2018 BJD13_10595 f531496fe07a67f9d60938de041dd1c7 719 Gene3D G3DSA:1.20.1560.10 158 473 6.2E-56 T 17-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BJD13_10595 f531496fe07a67f9d60938de041dd1c7 719 ProSitePatterns PS00211 ABC transporters family signature. 626 640 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD13_04075 0198b7392cbe0d57d2efc429a7ebf3c3 559 Gene3D G3DSA:1.20.1250.20 263 486 1.3E-14 T 17-10-2018 BJD13_04075 0198b7392cbe0d57d2efc429a7ebf3c3 559 SUPERFAMILY SSF103473 27 488 3.66E-44 T 17-10-2018 IPR036259 MFS transporter superfamily BJD13_04075 0198b7392cbe0d57d2efc429a7ebf3c3 559 Pfam PF07690 Major Facilitator Superfamily 40 440 5.9E-36 T 17-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD13_04075 0198b7392cbe0d57d2efc429a7ebf3c3 559 Gene3D G3DSA:1.20.1250.20 29 249 1.1E-14 T 17-10-2018 BJD13_15550 5d8d8f4948e9753b3e8b2548609ced9d 163 SUPERFAMILY SSF158694 9 162 6.28E-47 T 17-10-2018 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 BJD13_15550 5d8d8f4948e9753b3e8b2548609ced9d 163 Pfam PF09349 OHCU decarboxylase 8 160 7.4E-39 T 17-10-2018 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 BJD13_15550 5d8d8f4948e9753b3e8b2548609ced9d 163 Gene3D G3DSA:1.10.3330.10 8 162 4.6E-56 T 17-10-2018 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 BJD13_15550 5d8d8f4948e9753b3e8b2548609ced9d 163 TIGRFAM TIGR03164 UHCUDC: OHCU decarboxylase 10 162 3.0E-55 T 17-10-2018 IPR017580 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1 GO:0019428 KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 BJD13_07150 cf19dfc356b0349d3aba09fa9f10c2bf 217 Gene3D G3DSA:3.40.225.10 11 214 1.1E-46 T 17-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily BJD13_07150 cf19dfc356b0349d3aba09fa9f10c2bf 217 TIGRFAM TIGR03328 salvage_mtnB: methylthioribulose-1-phosphate dehydratase 22 212 1.5E-72 T 17-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 BJD13_07150 cf19dfc356b0349d3aba09fa9f10c2bf 217 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 22 207 8.8E-40 T 17-10-2018 IPR001303 Class II aldolase/adducin N-terminal BJD13_07150 cf19dfc356b0349d3aba09fa9f10c2bf 217 SUPERFAMILY SSF53639 16 213 1.49E-44 T 17-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily BJD13_07150 cf19dfc356b0349d3aba09fa9f10c2bf 217 SMART SM01007 20 208 1.7E-50 T 17-10-2018 IPR001303 Class II aldolase/adducin N-terminal BJD13_07150 cf19dfc356b0349d3aba09fa9f10c2bf 217 Hamap MF_01677 Methylthioribulose-1-phosphate dehydratase [mtnB]. 1 216 107.233 T 17-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 BJD13_21930 4e106e39c392a1c14d248623ad5cfdd2 297 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 226 268 - T 17-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 BJD13_21930 4e106e39c392a1c14d248623ad5cfdd2 297 Pfam PF12833 Helix-turn-helix domain 195 273 9.2E-18 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD13_21930 4e106e39c392a1c14d248623ad5cfdd2 297 Gene3D G3DSA:1.10.10.60 169 279 2.0E-22 T 17-10-2018 BJD13_21930 4e106e39c392a1c14d248623ad5cfdd2 297 SUPERFAMILY SSF46689 225 276 1.16E-10 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_21930 4e106e39c392a1c14d248623ad5cfdd2 297 SMART SM00342 189 272 4.3E-16 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD13_22005 08dae36085030b62c4a5ed1b71c3eedb 290 Gene3D G3DSA:1.10.287.70 33 246 2.1E-54 T 17-10-2018 BJD13_22005 08dae36085030b62c4a5ed1b71c3eedb 290 SUPERFAMILY SSF81324 30 244 2.88E-53 T 17-10-2018 BJD13_22005 08dae36085030b62c4a5ed1b71c3eedb 290 Pfam PF00520 Ion transport protein 35 240 3.2E-31 T 17-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 BJD13_22005 08dae36085030b62c4a5ed1b71c3eedb 290 PRINTS PR00169 Potassium channel signature 189 211 3.7E-28 T 17-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 BJD13_22005 08dae36085030b62c4a5ed1b71c3eedb 290 PRINTS PR00169 Potassium channel signature 131 157 3.7E-28 T 17-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 BJD13_22005 08dae36085030b62c4a5ed1b71c3eedb 290 PRINTS PR00169 Potassium channel signature 95 115 3.7E-28 T 17-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 BJD13_22005 08dae36085030b62c4a5ed1b71c3eedb 290 PRINTS PR00169 Potassium channel signature 218 244 3.7E-28 T 17-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 BJD13_22005 08dae36085030b62c4a5ed1b71c3eedb 290 PRINTS PR00169 Potassium channel signature 160 183 3.7E-28 T 17-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 BJD13_22005 08dae36085030b62c4a5ed1b71c3eedb 290 PRINTS PR00169 Potassium channel signature 69 92 3.7E-28 T 17-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 BJD13_22005 08dae36085030b62c4a5ed1b71c3eedb 290 PRINTS PR00169 Potassium channel signature 27 55 3.7E-28 T 17-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 BJD13_14470 a2d9ec222cb599251ebd251a6a2516e0 265 Gene3D G3DSA:3.20.20.70 1 265 2.4E-101 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD13_14470 a2d9ec222cb599251ebd251a6a2516e0 265 SUPERFAMILY SSF51366 12 262 8.36E-89 T 17-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 BJD13_14470 a2d9ec222cb599251ebd251a6a2516e0 265 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 56 74 - T 17-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 BJD13_14470 a2d9ec222cb599251ebd251a6a2516e0 265 Pfam PF00218 Indole-3-glycerol phosphate synthase 5 260 4.7E-94 T 17-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 BJD13_14470 a2d9ec222cb599251ebd251a6a2516e0 265 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 262 35.984 T 17-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 BJD13_17865 2e5ca23076c2e334a2c1f07fc17357ad 208 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 161 18.789 T 17-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 BJD13_17865 2e5ca23076c2e334a2c1f07fc17357ad 208 Pfam PF02416 mttA/Hcf106 family 4 33 1.3E-5 T 17-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 BJD13_17865 2e5ca23076c2e334a2c1f07fc17357ad 208 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 79 1.9E-26 T 17-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 BJD13_17865 2e5ca23076c2e334a2c1f07fc17357ad 208 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 1.3E-20 T 17-10-2018 BJD13_17865 2e5ca23076c2e334a2c1f07fc17357ad 208 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 1.3E-20 T 17-10-2018 BJD13_17865 2e5ca23076c2e334a2c1f07fc17357ad 208 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 1.3E-20 T 17-10-2018 BJD13_11105 713c1c817ff9972a1a2c1ea81a9a9000 325 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 5 325 72.653 T 17-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 BJD13_11105 713c1c817ff9972a1a2c1ea81a9a9000 325 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 110 187 1.7E-35 T 17-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 BJD13_11105 713c1c817ff9972a1a2c1ea81a9a9000 325 Gene3D G3DSA:3.40.47.10 2 325 4.0E-135 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 BJD13_11105 713c1c817ff9972a1a2c1ea81a9a9000 325 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 236 325 8.8E-38 T 17-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 BJD13_11105 713c1c817ff9972a1a2c1ea81a9a9000 325 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 6 324 2.4E-136 T 17-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 BJD13_11105 713c1c817ff9972a1a2c1ea81a9a9000 325 SUPERFAMILY SSF53901 7 325 3.85E-75 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 BJD13_09340 be19d2642d06cdfd0f0dcddc09c41105 526 SUPERFAMILY SSF103473 24 511 1.09E-66 T 17-10-2018 IPR036259 MFS transporter superfamily BJD13_09340 be19d2642d06cdfd0f0dcddc09c41105 526 PRINTS PR01036 Tetracycline resistance protein TetB signature 32 56 1.6E-5 T 17-10-2018 BJD13_09340 be19d2642d06cdfd0f0dcddc09c41105 526 PRINTS PR01036 Tetracycline resistance protein TetB signature 153 177 1.6E-5 T 17-10-2018 BJD13_09340 be19d2642d06cdfd0f0dcddc09c41105 526 PRINTS PR01036 Tetracycline resistance protein TetB signature 219 237 1.6E-5 T 17-10-2018 BJD13_09340 be19d2642d06cdfd0f0dcddc09c41105 526 Gene3D G3DSA:1.20.1720.10 30 237 2.7E-51 T 17-10-2018 BJD13_09340 be19d2642d06cdfd0f0dcddc09c41105 526 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 29 507 2.9E-155 T 17-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 BJD13_09340 be19d2642d06cdfd0f0dcddc09c41105 526 Pfam PF07690 Major Facilitator Superfamily 33 427 1.2E-52 T 17-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD13_10600 e1e2052d860a5e4f26bf534ac21ccc27 412 Gene3D G3DSA:1.10.287.470 202 258 5.1E-10 T 17-10-2018 BJD13_10600 e1e2052d860a5e4f26bf534ac21ccc27 412 Pfam PF13437 HlyD family secretion protein 263 382 4.6E-14 T 17-10-2018 BJD13_10600 e1e2052d860a5e4f26bf534ac21ccc27 412 Gene3D G3DSA:2.40.50.100 200 298 5.1E-10 T 17-10-2018 BJD13_10600 e1e2052d860a5e4f26bf534ac21ccc27 412 Gene3D G3DSA:2.40.30.170 299 391 5.1E-10 T 17-10-2018 BJD13_10600 e1e2052d860a5e4f26bf534ac21ccc27 412 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 379 394 3.5E-11 T 17-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BJD13_10600 e1e2052d860a5e4f26bf534ac21ccc27 412 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 79 99 3.5E-11 T 17-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BJD13_10600 e1e2052d860a5e4f26bf534ac21ccc27 412 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 274 295 3.5E-11 T 17-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BJD13_10600 e1e2052d860a5e4f26bf534ac21ccc27 412 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 307 331 3.5E-11 T 17-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 BJD13_10600 e1e2052d860a5e4f26bf534ac21ccc27 412 Gene3D G3DSA:2.40.50.100 68 161 9.0E-6 T 17-10-2018 BJD13_10600 e1e2052d860a5e4f26bf534ac21ccc27 412 Pfam PF13533 Biotin-lipoyl like 69 102 6.5E-7 T 17-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain BJD13_23610 0c8ba3a387f2e1e488be01053f36f3f6 131 SUPERFAMILY SSF51230 4 128 9.42E-45 T 17-10-2018 IPR011053 Single hybrid motif BJD13_23610 0c8ba3a387f2e1e488be01053f36f3f6 131 Pfam PF01597 Glycine cleavage H-protein 8 128 1.8E-44 T 17-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate BJD13_23610 0c8ba3a387f2e1e488be01053f36f3f6 131 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 17-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 BJD13_23610 0c8ba3a387f2e1e488be01053f36f3f6 131 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 127 42.24 T 17-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 BJD13_23610 0c8ba3a387f2e1e488be01053f36f3f6 131 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 130 1.4E-49 T 17-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 BJD13_23610 0c8ba3a387f2e1e488be01053f36f3f6 131 Gene3D G3DSA:2.40.50.100 2 129 4.7E-49 T 17-10-2018 BJD13_09305 ef5f252c0f9831bca9c06aa04f7dd17a 202 Gene3D G3DSA:1.20.1540.10 1 191 8.7E-26 T 17-10-2018 IPR035952 Rhomboid-like superfamily BJD13_09305 ef5f252c0f9831bca9c06aa04f7dd17a 202 Pfam PF01694 Rhomboid family 35 186 1.9E-26 T 17-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 BJD13_09305 ef5f252c0f9831bca9c06aa04f7dd17a 202 SUPERFAMILY SSF144091 2 189 5.49E-34 T 17-10-2018 BJD13_11280 0dc08abe08e3f49344a0cd6ddad789be 114 Pfam PF13560 Helix-turn-helix domain 12 72 8.9E-15 T 17-10-2018 BJD13_11280 0dc08abe08e3f49344a0cd6ddad789be 114 SMART SM00530 14 74 1.7E-13 T 17-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BJD13_11280 0dc08abe08e3f49344a0cd6ddad789be 114 SUPERFAMILY SSF47413 8 76 1.34E-14 T 17-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BJD13_11280 0dc08abe08e3f49344a0cd6ddad789be 114 Gene3D G3DSA:1.10.260.40 11 110 9.1E-22 T 17-10-2018 BJD13_17490 e24c3816b4323bf8895453f1d57c8bf7 197 SUPERFAMILY SSF48613 11 191 5.44E-47 T 17-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 BJD13_17490 e24c3816b4323bf8895453f1d57c8bf7 197 Gene3D G3DSA:1.20.910.10 6 193 1.5E-44 T 17-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 BJD13_17490 e24c3816b4323bf8895453f1d57c8bf7 197 Pfam PF01126 Heme oxygenase 109 191 3.3E-6 T 17-10-2018 IPR016053 Haem oxygenase-like GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|MetaCyc: PWY-5874|Reactome: R-HSA-189483|Reactome: R-HSA-917937 BJD13_17490 e24c3816b4323bf8895453f1d57c8bf7 197 Pfam PF01126 Heme oxygenase 13 66 1.8E-5 T 17-10-2018 IPR016053 Haem oxygenase-like GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|MetaCyc: PWY-5874|Reactome: R-HSA-189483|Reactome: R-HSA-917937 BJD13_19815 e9f11a64b54d791d166cf1ce32c68bdf 430 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 11 33 1.4E-6 T 17-10-2018 BJD13_19815 e9f11a64b54d791d166cf1ce32c68bdf 430 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 300 307 1.4E-6 T 17-10-2018 BJD13_19815 e9f11a64b54d791d166cf1ce32c68bdf 430 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 164 189 1.4E-6 T 17-10-2018 BJD13_19815 e9f11a64b54d791d166cf1ce32c68bdf 430 Gene3D G3DSA:3.50.50.100 9 407 1.5E-119 T 17-10-2018 BJD13_19815 e9f11a64b54d791d166cf1ce32c68bdf 430 SUPERFAMILY SSF51905 11 337 5.47E-34 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_19815 e9f11a64b54d791d166cf1ce32c68bdf 430 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 11 327 5.4E-56 T 17-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BJD13_19815 e9f11a64b54d791d166cf1ce32c68bdf 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 164 182 7.3E-8 T 17-10-2018 BJD13_19815 e9f11a64b54d791d166cf1ce32c68bdf 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 7.3E-8 T 17-10-2018 BJD13_19815 e9f11a64b54d791d166cf1ce32c68bdf 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 7.3E-8 T 17-10-2018 BJD13_21775 e7d75f968d8d8efb995afec82ea4bd6f 449 ProSitePatterns PS00216 Sugar transport proteins signature 1. 303 320 - T 17-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 BJD13_21775 e7d75f968d8d8efb995afec82ea4bd6f 449 Gene3D G3DSA:1.20.1250.20 23 436 9.6E-57 T 17-10-2018 BJD13_21775 e7d75f968d8d8efb995afec82ea4bd6f 449 SUPERFAMILY SSF103473 27 432 2.62E-62 T 17-10-2018 IPR036259 MFS transporter superfamily BJD13_21775 e7d75f968d8d8efb995afec82ea4bd6f 449 ProSitePatterns PS00217 Sugar transport proteins signature 2. 135 160 - T 17-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 BJD13_21775 e7d75f968d8d8efb995afec82ea4bd6f 449 Pfam PF00083 Sugar (and other) transporter 29 227 2.1E-24 T 17-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 BJD13_15755 f56652d1579076ae07f1ce649f0a3fbf 352 Pfam PF00027 Cyclic nucleotide-binding domain 43 127 7.4E-19 T 17-10-2018 IPR000595 Cyclic nucleotide-binding domain BJD13_15755 f56652d1579076ae07f1ce649f0a3fbf 352 SMART SM00100 24 139 9.0E-18 T 17-10-2018 IPR000595 Cyclic nucleotide-binding domain BJD13_15755 f56652d1579076ae07f1ce649f0a3fbf 352 Pfam PF00990 Diguanylate cyclase, GGDEF domain 182 333 1.3E-38 T 17-10-2018 IPR000160 GGDEF domain BJD13_15755 f56652d1579076ae07f1ce649f0a3fbf 352 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 178 337 3.8E-35 T 17-10-2018 IPR000160 GGDEF domain BJD13_15755 f56652d1579076ae07f1ce649f0a3fbf 352 Gene3D G3DSA:3.30.70.270 180 345 4.0E-44 T 17-10-2018 BJD13_15755 f56652d1579076ae07f1ce649f0a3fbf 352 SUPERFAMILY SSF55073 186 337 4.79E-37 T 17-10-2018 IPR029787 Nucleotide cyclase BJD13_15755 f56652d1579076ae07f1ce649f0a3fbf 352 SMART SM00267 170 338 3.1E-42 T 17-10-2018 IPR000160 GGDEF domain BJD13_15755 f56652d1579076ae07f1ce649f0a3fbf 352 SUPERFAMILY SSF51206 28 150 1.44E-22 T 17-10-2018 IPR018490 Cyclic nucleotide-binding-like BJD13_15755 f56652d1579076ae07f1ce649f0a3fbf 352 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 88 106 - T 17-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site BJD13_15755 f56652d1579076ae07f1ce649f0a3fbf 352 Gene3D G3DSA:2.60.120.10 23 150 2.8E-46 T 17-10-2018 IPR014710 RmlC-like jelly roll fold BJD13_01525 b88dd369e86df54ec01e9c28956c979a 330 TIGRFAM TIGR02775 TrbG_Ti: P-type conjugative transfer protein TrbG 108 320 2.2E-56 T 17-10-2018 IPR014142 P-type conjugative transfer protein TrbG BJD13_01525 b88dd369e86df54ec01e9c28956c979a 330 Gene3D G3DSA:2.60.40.2500 231 330 2.5E-10 T 17-10-2018 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily BJD13_01525 b88dd369e86df54ec01e9c28956c979a 330 Pfam PF03524 Conjugal transfer protein 110 329 2.6E-51 T 17-10-2018 IPR010258 Conjugal transfer, TrbG/VirB9/CagX BJD13_19750 f93350f96c9911184bf1f87723ac1cd5 314 Gene3D G3DSA:1.10.10.10 5 93 3.6E-21 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_19750 f93350f96c9911184bf1f87723ac1cd5 314 Pfam PF03466 LysR substrate binding domain 89 286 3.9E-28 T 17-10-2018 IPR005119 LysR, substrate-binding BJD13_19750 f93350f96c9911184bf1f87723ac1cd5 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 6.4E-16 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_19750 f93350f96c9911184bf1f87723ac1cd5 314 Gene3D G3DSA:3.40.190.10 100 283 2.6E-45 T 17-10-2018 BJD13_19750 f93350f96c9911184bf1f87723ac1cd5 314 Gene3D G3DSA:3.40.190.10 161 256 2.6E-45 T 17-10-2018 BJD13_19750 f93350f96c9911184bf1f87723ac1cd5 314 SUPERFAMILY SSF53850 91 291 4.52E-34 T 17-10-2018 BJD13_19750 f93350f96c9911184bf1f87723ac1cd5 314 SUPERFAMILY SSF46785 6 111 1.77E-19 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_00910 26478093ac148acdc7701575b37c9df5 174 SUPERFAMILY SSF109604 5 173 1.51E-30 T 17-10-2018 BJD13_00910 26478093ac148acdc7701575b37c9df5 174 Gene3D G3DSA:1.10.3210.10 3 174 2.9E-45 T 17-10-2018 BJD13_16730 988d0527f8a6fd50ce17204ac1a4ae97 729 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 289 530 1.0E-32 T 17-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 BJD13_16730 988d0527f8a6fd50ce17204ac1a4ae97 729 SUPERFAMILY SSF51695 288 407 7.74E-21 T 17-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 BJD13_16730 988d0527f8a6fd50ce17204ac1a4ae97 729 Gene3D G3DSA:3.20.20.190 281 559 1.8E-23 T 17-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 BJD13_23085 d88fef903edb375637b1663ae3a81867 97 SMART SM00834 1 42 7.9E-17 T 17-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain BJD13_23085 d88fef903edb375637b1663ae3a81867 97 Pfam PF09723 Zinc ribbon domain 1 41 3.8E-15 T 17-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain BJD13_23085 d88fef903edb375637b1663ae3a81867 97 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 52 3.0E-21 T 17-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain BJD13_11315 e941fd60f01a446954d322acab93da8d 303 SUPERFAMILY SSF51206 29 145 1.05E-21 T 17-10-2018 IPR018490 Cyclic nucleotide-binding-like BJD13_11315 e941fd60f01a446954d322acab93da8d 303 Pfam PF00027 Cyclic nucleotide-binding domain 43 122 8.2E-13 T 17-10-2018 IPR000595 Cyclic nucleotide-binding domain BJD13_11315 e941fd60f01a446954d322acab93da8d 303 Pfam PF10137 Predicted nucleotide-binding protein containing TIR-like domain 154 273 5.0E-28 T 17-10-2018 IPR019302 Nucleotide-binding protein, predicted, TIR-like domain BJD13_11315 e941fd60f01a446954d322acab93da8d 303 SMART SM00100 18 139 1.2E-7 T 17-10-2018 IPR000595 Cyclic nucleotide-binding domain BJD13_11315 e941fd60f01a446954d322acab93da8d 303 Gene3D G3DSA:2.60.120.10 25 144 3.3E-24 T 17-10-2018 IPR014710 RmlC-like jelly roll fold BJD13_03540 da5cad4de60e5180964a2c88a999c7d3 118 SUPERFAMILY SSF46955 17 113 1.56E-17 T 17-10-2018 IPR009061 Putative DNA-binding domain superfamily BJD13_03540 da5cad4de60e5180964a2c88a999c7d3 118 Pfam PF13411 MerR HTH family regulatory protein 19 86 1.4E-21 T 17-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD13_03540 da5cad4de60e5180964a2c88a999c7d3 118 SMART SM00422 19 89 2.2E-5 T 17-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BJD13_03540 da5cad4de60e5180964a2c88a999c7d3 118 Gene3D G3DSA:1.10.1660.10 13 87 7.3E-21 T 17-10-2018 BJD13_18070 7cc2282657e2534ed667b70aaefb4010 256 Gene3D G3DSA:3.40.50.720 11 255 1.7E-76 T 17-10-2018 BJD13_18070 7cc2282657e2534ed667b70aaefb4010 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 17-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BJD13_18070 7cc2282657e2534ed667b70aaefb4010 256 SUPERFAMILY SSF51735 14 255 4.85E-74 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_18070 7cc2282657e2534ed667b70aaefb4010 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 23 255 5.8E-63 T 17-10-2018 BJD13_18070 7cc2282657e2534ed667b70aaefb4010 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 6.1E-9 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_18070 7cc2282657e2534ed667b70aaefb4010 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 6.1E-9 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_18070 7cc2282657e2534ed667b70aaefb4010 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 6.1E-9 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_18070 7cc2282657e2534ed667b70aaefb4010 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 17 34 1.7E-38 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_18070 7cc2282657e2534ed667b70aaefb4010 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.7E-38 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_18070 7cc2282657e2534ed667b70aaefb4010 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.7E-38 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_18070 7cc2282657e2534ed667b70aaefb4010 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.7E-38 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_18070 7cc2282657e2534ed667b70aaefb4010 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 1.7E-38 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_18070 7cc2282657e2534ed667b70aaefb4010 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 1.7E-38 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_21250 0b00ad1b34d840bdde3016e621ce55f2 199 Gene3D G3DSA:2.60.120.590 5 196 6.2E-65 T 17-10-2018 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily BJD13_21250 0b00ad1b34d840bdde3016e621ce55f2 199 SUPERFAMILY SSF51197 5 192 5.04E-63 T 17-10-2018 BJD13_21250 0b00ad1b34d840bdde3016e621ce55f2 199 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 14 190 4.8E-37 T 17-10-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like BJD13_13105 50e6092ccc72c919fa39864e685e1121 255 SUPERFAMILY SSF56219 5 251 2.75E-32 T 17-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BJD13_13105 50e6092ccc72c919fa39864e685e1121 255 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 12 240 3.8E-10 T 17-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase BJD13_13105 50e6092ccc72c919fa39864e685e1121 255 Gene3D G3DSA:3.60.10.10 6 252 1.7E-38 T 17-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BJD13_19465 85707a66611cbad639f75a3ca2d79d2e 377 Gene3D G3DSA:3.30.420.40 17 372 2.4E-124 T 17-10-2018 BJD13_19465 85707a66611cbad639f75a3ca2d79d2e 377 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 11 377 7.6E-151 T 17-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 BJD13_19465 85707a66611cbad639f75a3ca2d79d2e 377 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 10 377 41.794 T 17-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 BJD13_19465 85707a66611cbad639f75a3ca2d79d2e 377 Gene3D G3DSA:3.30.420.40 155 337 2.4E-124 T 17-10-2018 BJD13_19465 85707a66611cbad639f75a3ca2d79d2e 377 SUPERFAMILY SSF53067 10 350 8.2E-25 T 17-10-2018 BJD13_12480 892e287a612404d2980881626c5a1ae0 127 SUPERFAMILY SSF110069 8 127 2.49E-46 T 17-10-2018 IPR036767 ApaG domain superfamily BJD13_12480 892e287a612404d2980881626c5a1ae0 127 Gene3D G3DSA:2.60.40.1470 1 127 2.6E-48 T 17-10-2018 IPR036767 ApaG domain superfamily BJD13_12480 892e287a612404d2980881626c5a1ae0 127 Hamap MF_00791 Protein ApaG [apaG]. 2 127 33.318 T 17-10-2018 IPR023065 Uncharacterised protein family ApaG BJD13_12480 892e287a612404d2980881626c5a1ae0 127 Pfam PF04379 ApaG domain 20 104 1.8E-34 T 17-10-2018 IPR007474 ApaG domain BJD13_02370 35f78f70cd62db22a26fe63580b69c0f 467 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 17-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD13_02370 35f78f70cd62db22a26fe63580b69c0f 467 Gene3D G3DSA:1.10.10.350 369 464 1.3E-21 T 17-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 BJD13_02370 35f78f70cd62db22a26fe63580b69c0f 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 179 189 4.1E-24 T 17-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BJD13_02370 35f78f70cd62db22a26fe63580b69c0f 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 4.1E-24 T 17-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BJD13_02370 35f78f70cd62db22a26fe63580b69c0f 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 4.1E-24 T 17-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BJD13_02370 35f78f70cd62db22a26fe63580b69c0f 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 4.1E-24 T 17-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BJD13_02370 35f78f70cd62db22a26fe63580b69c0f 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 195 203 4.1E-24 T 17-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BJD13_02370 35f78f70cd62db22a26fe63580b69c0f 467 SUPERFAMILY SSF48163 299 461 5.36E-36 T 17-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 BJD13_02370 35f78f70cd62db22a26fe63580b69c0f 467 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 4 305 8.5E-101 T 17-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 BJD13_02370 35f78f70cd62db22a26fe63580b69c0f 467 Gene3D G3DSA:3.40.50.620 2 314 2.2E-129 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD13_02370 35f78f70cd62db22a26fe63580b69c0f 467 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 462 3.3E-168 T 17-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 BJD13_02370 35f78f70cd62db22a26fe63580b69c0f 467 SUPERFAMILY SSF52374 4 295 7.78E-106 T 17-10-2018 BJD13_02370 35f78f70cd62db22a26fe63580b69c0f 467 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 461 30.691 T 17-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 BJD13_15590 0b5354745fa1e63b551a70da43df8c1c 284 SUPERFAMILY SSF53335 58 248 7.31E-14 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_15590 0b5354745fa1e63b551a70da43df8c1c 284 PIRSF PIRSF031679 9 284 4.3E-114 T 17-10-2018 IPR016980 S-adenosyl-L-methionine dependent methyltransferase, Alr7345, predicted BJD13_15590 0b5354745fa1e63b551a70da43df8c1c 284 Gene3D G3DSA:3.40.50.150 51 242 2.5E-19 T 17-10-2018 BJD13_19875 21633f2226f8a673f2b84f3f6b24db60 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 2.9E-7 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_19875 21633f2226f8a673f2b84f3f6b24db60 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 2.9E-7 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_19875 21633f2226f8a673f2b84f3f6b24db60 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 2.9E-7 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_19875 21633f2226f8a673f2b84f3f6b24db60 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 253 4.7E-62 T 17-10-2018 BJD13_19875 21633f2226f8a673f2b84f3f6b24db60 258 SUPERFAMILY SSF51735 9 255 4.35E-80 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_19875 21633f2226f8a673f2b84f3f6b24db60 258 Gene3D G3DSA:3.40.50.720 1 255 7.4E-81 T 17-10-2018 BJD13_19875 21633f2226f8a673f2b84f3f6b24db60 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 17-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BJD13_19875 21633f2226f8a673f2b84f3f6b24db60 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 2.7E-36 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_19875 21633f2226f8a673f2b84f3f6b24db60 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 2.7E-36 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_19875 21633f2226f8a673f2b84f3f6b24db60 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 2.7E-36 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_19875 21633f2226f8a673f2b84f3f6b24db60 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 2.7E-36 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_19875 21633f2226f8a673f2b84f3f6b24db60 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 2.7E-36 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_19875 21633f2226f8a673f2b84f3f6b24db60 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 2.7E-36 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_23675 5f9600b8a7850a50cd0913f6d492111d 142 Gene3D G3DSA:3.10.580.10 1 142 1.2E-45 T 17-10-2018 BJD13_23675 5f9600b8a7850a50cd0913f6d492111d 142 SUPERFAMILY SSF54631 3 140 2.4E-34 T 17-10-2018 BJD13_23675 5f9600b8a7850a50cd0913f6d492111d 142 SMART SM00116 79 126 4.9E-13 T 17-10-2018 IPR000644 CBS domain BJD13_23675 5f9600b8a7850a50cd0913f6d492111d 142 SMART SM00116 14 61 1.4E-4 T 17-10-2018 IPR000644 CBS domain BJD13_23675 5f9600b8a7850a50cd0913f6d492111d 142 Pfam PF00571 CBS domain 72 125 1.9E-15 T 17-10-2018 IPR000644 CBS domain BJD13_23675 5f9600b8a7850a50cd0913f6d492111d 142 Pfam PF00571 CBS domain 13 60 4.3E-8 T 17-10-2018 IPR000644 CBS domain BJD13_12215 bd52306337c253dbca901c029250c5ed 328 SUPERFAMILY SSF47807 185 304 5.83E-24 T 17-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily BJD13_12215 bd52306337c253dbca901c029250c5ed 328 SMART SM00475 16 282 7.8E-77 T 17-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 BJD13_12215 bd52306337c253dbca901c029250c5ed 328 Gene3D G3DSA:3.40.50.1010 21 298 3.5E-75 T 17-10-2018 BJD13_12215 bd52306337c253dbca901c029250c5ed 328 SMART SM00279 187 222 3.4E-10 T 17-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 BJD13_12215 bd52306337c253dbca901c029250c5ed 328 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 185 281 2.0E-23 T 17-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 BJD13_12215 bd52306337c253dbca901c029250c5ed 328 Gene3D G3DSA:1.10.150.20 188 267 3.5E-75 T 17-10-2018 BJD13_12215 bd52306337c253dbca901c029250c5ed 328 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 21 180 3.0E-39 T 17-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 BJD13_12215 bd52306337c253dbca901c029250c5ed 328 SUPERFAMILY SSF88723 20 174 8.34E-42 T 17-10-2018 IPR029060 PIN-like domain superfamily BJD13_19335 ae9c069a2cd5fe3145a562048c5f416f 285 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 6 284 36.493 T 17-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 BJD13_19335 ae9c069a2cd5fe3145a562048c5f416f 285 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 83 96 - T 17-10-2018 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 BJD13_19335 ae9c069a2cd5fe3145a562048c5f416f 285 Gene3D G3DSA:2.30.140.10 3 58 1.1E-19 T 17-10-2018 IPR037163 Spermidine synthase, tetramerisation domain superfamily KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 BJD13_19335 ae9c069a2cd5fe3145a562048c5f416f 285 Pfam PF01564 Spermine/spermidine synthase domain 63 245 1.5E-52 T 17-10-2018 BJD13_19335 ae9c069a2cd5fe3145a562048c5f416f 285 Pfam PF17284 Spermidine synthase tetramerisation domain 7 58 4.3E-10 T 17-10-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 BJD13_19335 ae9c069a2cd5fe3145a562048c5f416f 285 TIGRFAM TIGR00417 speE: spermidine synthase 7 278 1.9E-81 T 17-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 BJD13_19335 ae9c069a2cd5fe3145a562048c5f416f 285 SUPERFAMILY SSF53335 7 284 4.48E-76 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_19335 ae9c069a2cd5fe3145a562048c5f416f 285 Gene3D G3DSA:3.40.50.150 59 285 3.7E-62 T 17-10-2018 BJD13_15100 580d37169cc671d491054a24344f3e15 450 Pfam PF10397 Adenylosuccinate lyase C-terminus 366 443 3.6E-13 T 17-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BJD13_15100 580d37169cc671d491054a24344f3e15 450 PRINTS PR00145 Argininosuccinate lyase family signature 277 293 6.3E-9 T 17-10-2018 BJD13_15100 580d37169cc671d491054a24344f3e15 450 PRINTS PR00145 Argininosuccinate lyase family signature 101 123 6.3E-9 T 17-10-2018 BJD13_15100 580d37169cc671d491054a24344f3e15 450 PRINTS PR00145 Argininosuccinate lyase family signature 142 162 6.3E-9 T 17-10-2018 BJD13_15100 580d37169cc671d491054a24344f3e15 450 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 6.3E-9 T 17-10-2018 BJD13_15100 580d37169cc671d491054a24344f3e15 450 Gene3D G3DSA:1.10.40.30 364 449 3.9E-22 T 17-10-2018 BJD13_15100 580d37169cc671d491054a24344f3e15 450 ProSitePatterns PS00163 Fumarate lyases signature. 277 286 - T 17-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 BJD13_15100 580d37169cc671d491054a24344f3e15 450 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 3.7E-22 T 17-10-2018 IPR000362 Fumarate lyase family BJD13_15100 580d37169cc671d491054a24344f3e15 450 PRINTS PR00149 Fumarate lyase superfamily signature 102 120 3.7E-22 T 17-10-2018 IPR000362 Fumarate lyase family BJD13_15100 580d37169cc671d491054a24344f3e15 450 PRINTS PR00149 Fumarate lyase superfamily signature 147 165 3.7E-22 T 17-10-2018 IPR000362 Fumarate lyase family BJD13_15100 580d37169cc671d491054a24344f3e15 450 PRINTS PR00149 Fumarate lyase superfamily signature 277 293 3.7E-22 T 17-10-2018 IPR000362 Fumarate lyase family BJD13_15100 580d37169cc671d491054a24344f3e15 450 SUPERFAMILY SSF48557 6 444 8.95E-115 T 17-10-2018 IPR008948 L-Aspartase-like GO:0003824 BJD13_15100 580d37169cc671d491054a24344f3e15 450 TIGRFAM TIGR02426 protocat_pcaB: 3-carboxy-cis,cis-muconate cycloisomerase 7 350 5.3E-144 T 17-10-2018 IPR012789 3-carboxy-cis,cis-muconate cycloisomerase GO:0019619|GO:0047472 KEGG: 00362+5.5.1.2 BJD13_15100 580d37169cc671d491054a24344f3e15 450 Gene3D G3DSA:1.10.275.10 3 106 1.0E-37 T 17-10-2018 IPR024083 Fumarase/histidase, N-terminal BJD13_15100 580d37169cc671d491054a24344f3e15 450 Gene3D G3DSA:1.20.200.10 107 362 2.6E-92 T 17-10-2018 BJD13_15100 580d37169cc671d491054a24344f3e15 450 SMART SM00998 365 444 3.2E-23 T 17-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BJD13_15100 580d37169cc671d491054a24344f3e15 450 Pfam PF00206 Lyase 21 302 1.9E-53 T 17-10-2018 IPR022761 Fumarate lyase, N-terminal BJD13_02565 3704c81d7af525b30bccb3daee6bc3db 315 Pfam PF00892 EamA-like transporter family 16 138 1.7E-10 T 17-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BJD13_02565 3704c81d7af525b30bccb3daee6bc3db 315 Pfam PF00892 EamA-like transporter family 148 289 2.0E-14 T 17-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BJD13_02565 3704c81d7af525b30bccb3daee6bc3db 315 SUPERFAMILY SSF103481 195 290 2.22E-9 T 17-10-2018 BJD13_02565 3704c81d7af525b30bccb3daee6bc3db 315 SUPERFAMILY SSF103481 40 139 6.15E-7 T 17-10-2018 BJD13_21720 3f1a97acb8839df02e15bad96b51d856 397 SUPERFAMILY SSF56935 32 390 3.66E-11 T 17-10-2018 BJD13_21720 3f1a97acb8839df02e15bad96b51d856 397 Gene3D G3DSA:2.40.160.10 21 397 2.2E-74 T 17-10-2018 IPR023614 Porin domain superfamily BJD13_21720 3f1a97acb8839df02e15bad96b51d856 397 Pfam PF07396 Phosphate-selective porin O and P 36 397 2.9E-91 T 17-10-2018 IPR010870 Phosphate-selective porin O/P BJD13_04700 db320e99e62acb576386c5f2c1896809 637 Gene3D G3DSA:3.40.50.1820 46 398 1.5E-127 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_04700 db320e99e62acb576386c5f2c1896809 637 SMART SM00939 369 633 1.6E-82 T 17-10-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 BJD13_04700 db320e99e62acb576386c5f2c1896809 637 SUPERFAMILY SSF49785 398 637 3.83E-72 T 17-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD13_04700 db320e99e62acb576386c5f2c1896809 637 Pfam PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain 384 632 1.8E-36 T 17-10-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 BJD13_04700 db320e99e62acb576386c5f2c1896809 637 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 56 342 1.4E-75 T 17-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 BJD13_04700 db320e99e62acb576386c5f2c1896809 637 SUPERFAMILY SSF53474 43 404 7.27E-48 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_04700 db320e99e62acb576386c5f2c1896809 637 TIGRFAM TIGR00976 /NonD: hydrolase CocE/NonD family protein 53 636 2.2E-71 T 17-10-2018 IPR005674 CocE/Serine esterase GO:0016787 BJD13_04700 db320e99e62acb576386c5f2c1896809 637 Gene3D G3DSA:2.60.120.260 400 636 6.0E-81 T 17-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD13_04700 db320e99e62acb576386c5f2c1896809 637 Gene3D G3DSA:1.10.3020.10 212 287 1.5E-127 T 17-10-2018 BJD13_09825 6f01b7faf0c31c5aa48bc3bdadbf588d 57 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 1 52 20.7 T 17-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 BJD13_09825 6f01b7faf0c31c5aa48bc3bdadbf588d 57 Pfam PF07043 Protein of unknown function (DUF1328) 6 44 7.9E-11 T 17-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 BJD13_09825 6f01b7faf0c31c5aa48bc3bdadbf588d 57 PIRSF PIRSF036466 1 55 2.6E-22 T 17-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 BJD13_09750 75cfee0064d18bf7414b6ebf0f300f6e 200 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 26 199 15.491 T 17-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 BJD13_09750 75cfee0064d18bf7414b6ebf0f300f6e 200 Gene3D G3DSA:3.90.1140.10 22 199 8.3E-32 T 17-10-2018 BJD13_09750 75cfee0064d18bf7414b6ebf0f300f6e 200 Pfam PF13563 2'-5' RNA ligase superfamily 53 177 3.5E-13 T 17-10-2018 BJD13_09750 75cfee0064d18bf7414b6ebf0f300f6e 200 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 27 199 9.1E-20 T 17-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 BJD13_09750 75cfee0064d18bf7414b6ebf0f300f6e 200 SUPERFAMILY SSF55144 27 199 6.45E-32 T 17-10-2018 IPR009097 Cyclic phosphodiesterase BJD13_01765 3086e6a4e21ce9d3e6f54f426bedb0dd 316 SUPERFAMILY SSF53795 137 306 5.19E-32 T 17-10-2018 BJD13_01765 3086e6a4e21ce9d3e6f54f426bedb0dd 316 Gene3D G3DSA:3.40.1390.20 11 134 6.7E-24 T 17-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily BJD13_01765 3086e6a4e21ce9d3e6f54f426bedb0dd 316 Gene3D G3DSA:3.40.50.300 135 316 2.5E-60 T 17-10-2018 BJD13_01765 3086e6a4e21ce9d3e6f54f426bedb0dd 316 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 4 314 35.969 T 17-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 BJD13_01765 3086e6a4e21ce9d3e6f54f426bedb0dd 316 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 6 309 1.2E-100 T 17-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 BJD13_01765 3086e6a4e21ce9d3e6f54f426bedb0dd 316 Pfam PF07475 HPr Serine kinase C-terminal domain 135 306 1.6E-56 T 17-10-2018 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 BJD13_01765 3086e6a4e21ce9d3e6f54f426bedb0dd 316 Pfam PF02603 HPr Serine kinase N terminus 5 132 4.1E-23 T 17-10-2018 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 BJD13_01765 3086e6a4e21ce9d3e6f54f426bedb0dd 316 SUPERFAMILY SSF75138 10 136 4.05E-30 T 17-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily BJD13_05160 c45eb33bb85f56b31fd615a4e7f6b953 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 17-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BJD13_05160 c45eb33bb85f56b31fd615a4e7f6b953 252 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 2 252 6.1E-111 T 17-10-2018 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 BJD13_05160 c45eb33bb85f56b31fd615a4e7f6b953 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 1.3E-8 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_05160 c45eb33bb85f56b31fd615a4e7f6b953 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 1.3E-8 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_05160 c45eb33bb85f56b31fd615a4e7f6b953 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 1.3E-8 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_05160 c45eb33bb85f56b31fd615a4e7f6b953 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 8 250 1.4E-46 T 17-10-2018 BJD13_05160 c45eb33bb85f56b31fd615a4e7f6b953 252 SUPERFAMILY SSF51735 2 251 8.86E-68 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_05160 c45eb33bb85f56b31fd615a4e7f6b953 252 Gene3D G3DSA:3.40.50.720 1 252 9.8E-69 T 17-10-2018 BJD13_05160 c45eb33bb85f56b31fd615a4e7f6b953 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 4.8E-29 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_05160 c45eb33bb85f56b31fd615a4e7f6b953 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 4.8E-29 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_05160 c45eb33bb85f56b31fd615a4e7f6b953 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 4.8E-29 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_05160 c45eb33bb85f56b31fd615a4e7f6b953 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 4.8E-29 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_05160 c45eb33bb85f56b31fd615a4e7f6b953 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 4.8E-29 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_05160 c45eb33bb85f56b31fd615a4e7f6b953 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 4.8E-29 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_21065 6e2e39bee221e154a8fb4f49b2ce1c5d 160 Pfam PF13185 GAF domain 53 159 1.3E-11 T 17-10-2018 IPR003018 GAF domain GO:0005515 BJD13_21065 6e2e39bee221e154a8fb4f49b2ce1c5d 160 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 98 115 - T 17-10-2018 IPR000614 Free Met sulfoxide reductase conserved site BJD13_21065 6e2e39bee221e154a8fb4f49b2ce1c5d 160 Gene3D G3DSA:3.30.450.40 10 160 1.2E-62 T 17-10-2018 IPR029016 GAF-like domain superfamily BJD13_21065 6e2e39bee221e154a8fb4f49b2ce1c5d 160 SUPERFAMILY SSF55781 13 159 3.34E-42 T 17-10-2018 BJD13_21065 6e2e39bee221e154a8fb4f49b2ce1c5d 160 SMART SM00065 31 160 0.0047 T 17-10-2018 IPR003018 GAF domain GO:0005515 BJD13_09500 8a3a8f75683b48b7a597119b784a8f0c 788 Gene3D G3DSA:3.10.20.310 25 97 3.4E-20 T 17-10-2018 BJD13_09500 8a3a8f75683b48b7a597119b784a8f0c 788 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 31 788 3.6E-245 T 17-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 BJD13_09500 8a3a8f75683b48b7a597119b784a8f0c 788 Pfam PF01103 Surface antigen 454 788 3.1E-91 T 17-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 BJD13_09500 8a3a8f75683b48b7a597119b784a8f0c 788 PIRSF PIRSF006076 2 788 2.8E-254 T 17-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 BJD13_09500 8a3a8f75683b48b7a597119b784a8f0c 788 Gene3D G3DSA:3.10.20.310 98 179 2.2E-17 T 17-10-2018 BJD13_09500 8a3a8f75683b48b7a597119b784a8f0c 788 Gene3D G3DSA:3.10.20.310 271 351 5.2E-17 T 17-10-2018 BJD13_09500 8a3a8f75683b48b7a597119b784a8f0c 788 Gene3D G3DSA:3.10.20.310 352 427 6.5E-23 T 17-10-2018 BJD13_09500 8a3a8f75683b48b7a597119b784a8f0c 788 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 1 788 25.416 T 17-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 BJD13_09500 8a3a8f75683b48b7a597119b784a8f0c 788 Gene3D G3DSA:2.40.160.50 433 788 3.7E-106 T 17-10-2018 BJD13_09500 8a3a8f75683b48b7a597119b784a8f0c 788 Pfam PF07244 Surface antigen variable number repeat 33 97 1.0E-4 T 17-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 BJD13_09500 8a3a8f75683b48b7a597119b784a8f0c 788 Pfam PF07244 Surface antigen variable number repeat 353 426 1.7E-15 T 17-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 BJD13_09500 8a3a8f75683b48b7a597119b784a8f0c 788 Pfam PF07244 Surface antigen variable number repeat 272 350 1.7E-11 T 17-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 BJD13_09500 8a3a8f75683b48b7a597119b784a8f0c 788 Pfam PF07244 Surface antigen variable number repeat 182 269 5.8E-11 T 17-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 BJD13_09500 8a3a8f75683b48b7a597119b784a8f0c 788 Pfam PF07244 Surface antigen variable number repeat 99 178 4.0E-12 T 17-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 BJD13_09500 8a3a8f75683b48b7a597119b784a8f0c 788 Gene3D G3DSA:3.10.20.310 181 270 2.3E-18 T 17-10-2018 BJD13_12910 806d756b41360f7e866e572ae23b57c7 179 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 166 8.4E-28 T 17-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase BJD13_22480 116c0b074cb8b29fae3245d2a0f7444c 533 Pfam PF03929 PepSY-associated TM region 26 473 6.2E-67 T 17-10-2018 IPR005625 PepSY-associated TM protein BJD13_12090 0fa12de2b41dd0e6de581fb21867a85f 260 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 4 227 1.0E-104 T 17-10-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 KEGG: 00190+2.7.4.1 BJD13_12090 0fa12de2b41dd0e6de581fb21867a85f 260 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 4 228 5.0E-94 T 17-10-2018 IPR022488 Polyphosphate kinase-2-related BJD13_12090 0fa12de2b41dd0e6de581fb21867a85f 260 Gene3D G3DSA:3.40.50.300 1 236 5.6E-87 T 17-10-2018 BJD13_12090 0fa12de2b41dd0e6de581fb21867a85f 260 PIRSF PIRSF028756 1 253 5.8E-116 T 17-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 BJD13_12090 0fa12de2b41dd0e6de581fb21867a85f 260 SUPERFAMILY SSF52540 35 222 1.36E-28 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_22830 5f560768ae9da091e722b29670b0e019 252 Gene3D G3DSA:3.30.70.1020 100 175 3.0E-47 T 17-10-2018 BJD13_22830 5f560768ae9da091e722b29670b0e019 252 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 20 208 1.3E-18 T 17-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 BJD13_22830 5f560768ae9da091e722b29670b0e019 252 Pfam PF02358 Trehalose-phosphatase 21 226 1.0E-34 T 17-10-2018 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 BJD13_22830 5f560768ae9da091e722b29670b0e019 252 TIGRFAM TIGR00685 T6PP: trehalose-phosphatase 19 247 3.5E-38 T 17-10-2018 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 BJD13_22830 5f560768ae9da091e722b29670b0e019 252 SUPERFAMILY SSF56784 19 247 4.81E-41 T 17-10-2018 IPR036412 HAD-like superfamily BJD13_22830 5f560768ae9da091e722b29670b0e019 252 Gene3D G3DSA:3.40.50.1000 20 235 3.0E-47 T 17-10-2018 IPR023214 HAD superfamily BJD13_19770 057a04640ba89abec36ab0050bb75d8f 624 Gene3D G3DSA:3.40.50.300 336 623 4.3E-129 T 17-10-2018 BJD13_19770 057a04640ba89abec36ab0050bb75d8f 624 Gene3D G3DSA:1.10.720.10 207 253 2.8E-14 T 17-10-2018 BJD13_19770 057a04640ba89abec36ab0050bb75d8f 624 SUPERFAMILY SSF68912 207 252 8.24E-7 T 17-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily BJD13_19770 057a04640ba89abec36ab0050bb75d8f 624 TIGRFAM TIGR00767 rho: transcription termination factor Rho 207 623 2.0E-206 T 17-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 BJD13_19770 057a04640ba89abec36ab0050bb75d8f 624 Hamap MF_01884 Transcription termination factor Rho [rho]. 206 624 229.011 T 17-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 BJD13_19770 057a04640ba89abec36ab0050bb75d8f 624 SMART SM00959 210 253 1.2E-11 T 17-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 BJD13_19770 057a04640ba89abec36ab0050bb75d8f 624 Pfam PF07498 Rho termination factor, N-terminal domain 210 253 8.2E-13 T 17-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 BJD13_19770 057a04640ba89abec36ab0050bb75d8f 624 Gene3D G3DSA:2.40.50.140 254 329 4.4E-30 T 17-10-2018 BJD13_19770 057a04640ba89abec36ab0050bb75d8f 624 Pfam PF07497 Rho termination factor, RNA-binding domain 258 330 1.2E-27 T 17-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 BJD13_19770 057a04640ba89abec36ab0050bb75d8f 624 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 366 569 2.4E-22 T 17-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BJD13_19770 057a04640ba89abec36ab0050bb75d8f 624 SUPERFAMILY SSF50249 256 329 3.26E-25 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD13_19770 057a04640ba89abec36ab0050bb75d8f 624 SMART SM00357 258 324 6.8E-15 T 17-10-2018 IPR011129 Cold shock domain GO:0003676 BJD13_19770 057a04640ba89abec36ab0050bb75d8f 624 SUPERFAMILY SSF52540 296 577 5.61E-67 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_19770 057a04640ba89abec36ab0050bb75d8f 624 SMART SM00382 376 556 1.1E-6 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_02010 97f157d81a7ee9448aec194289f01369 284 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 17 111 5.3E-17 T 17-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal BJD13_02010 97f157d81a7ee9448aec194289f01369 284 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 175 278 3.4E-34 T 17-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 BJD13_02010 97f157d81a7ee9448aec194289f01369 284 PIRSF PIRSF000193 14 282 1.1E-68 T 17-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 BJD13_02010 97f157d81a7ee9448aec194289f01369 284 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 234 257 - T 17-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 BJD13_02010 97f157d81a7ee9448aec194289f01369 284 SUPERFAMILY SSF48179 174 280 2.21E-33 T 17-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BJD13_02010 97f157d81a7ee9448aec194289f01369 284 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 15 279 26.087 T 17-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 BJD13_02010 97f157d81a7ee9448aec194289f01369 284 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 17 279 3.0E-83 T 17-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 BJD13_02010 97f157d81a7ee9448aec194289f01369 284 Gene3D G3DSA:3.40.50.720 13 176 6.4E-46 T 17-10-2018 BJD13_02010 97f157d81a7ee9448aec194289f01369 284 SUPERFAMILY SSF51735 17 172 3.38E-33 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_02010 97f157d81a7ee9448aec194289f01369 284 Gene3D G3DSA:1.10.3730.10 177 283 7.6E-40 T 17-10-2018 BJD13_02580 b117f67d78ad3771f1383573166545a3 166 SUPERFAMILY SSF89562 3 158 3.4E-49 T 17-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily BJD13_02580 b117f67d78ad3771f1383573166545a3 166 Gene3D G3DSA:3.50.30.40 1 163 3.0E-62 T 17-10-2018 BJD13_02580 b117f67d78ad3771f1383573166545a3 166 Pfam PF03737 Aldolase/RraA 5 152 2.7E-41 T 17-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein BJD13_02580 b117f67d78ad3771f1383573166545a3 166 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 152 6.9E-68 T 17-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 BJD13_01435 3f309ac55a0585f26b9f55d8a8e7250d 198 Pfam PF10502 Signal peptidase, peptidase S26 41 188 2.2E-30 T 17-10-2018 IPR019533 Peptidase S26 BJD13_01435 3f309ac55a0585f26b9f55d8a8e7250d 198 SUPERFAMILY SSF51306 57 194 6.28E-22 T 17-10-2018 IPR036286 LexA/Signal peptidase-like superfamily BJD13_01435 3f309ac55a0585f26b9f55d8a8e7250d 198 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 92 104 9.0E-8 T 17-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 BJD13_01435 3f309ac55a0585f26b9f55d8a8e7250d 198 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 150 169 9.0E-8 T 17-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 BJD13_01435 3f309ac55a0585f26b9f55d8a8e7250d 198 Gene3D G3DSA:2.10.109.10 60 196 1.2E-12 T 17-10-2018 BJD13_01435 3f309ac55a0585f26b9f55d8a8e7250d 198 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 56 186 1.1E-13 T 17-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 BJD13_21390 8bb98dba142f704af3ba84aec0b0d520 265 Gene3D G3DSA:3.40.30.10 100 257 3.2E-47 T 17-10-2018 BJD13_21390 8bb98dba142f704af3ba84aec0b0d520 265 SUPERFAMILY SSF52833 114 255 7.78E-37 T 17-10-2018 IPR036249 Thioredoxin-like superfamily BJD13_21390 8bb98dba142f704af3ba84aec0b0d520 265 Pfam PF13098 Thioredoxin-like domain 132 253 3.0E-25 T 17-10-2018 IPR012336 Thioredoxin-like fold BJD13_21390 8bb98dba142f704af3ba84aec0b0d520 265 Pfam PF10411 Disulfide bond isomerase protein N-terminus 49 101 4.4E-17 T 17-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal BJD13_21390 8bb98dba142f704af3ba84aec0b0d520 265 SUPERFAMILY SSF54423 55 102 3.27E-11 T 17-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 BJD13_21390 8bb98dba142f704af3ba84aec0b0d520 265 Gene3D G3DSA:3.10.450.70 42 99 1.3E-11 T 17-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 BJD13_17045 3e83417d75164a8e84e59b4b2e775727 318 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 6 312 3.1E-121 T 17-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 BJD13_17045 3e83417d75164a8e84e59b4b2e775727 318 Pfam PF03741 Integral membrane protein TerC family 80 282 1.4E-54 T 17-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 BJD13_12775 e9150de53419ebcde7b3203125252187 315 TIGRFAM TIGR00586 mutt: mutator mutT protein 7 132 2.8E-33 T 17-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 BJD13_12775 e9150de53419ebcde7b3203125252187 315 ProSitePatterns PS00893 Nudix box signature. 42 63 - T 17-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 BJD13_12775 e9150de53419ebcde7b3203125252187 315 Gene3D G3DSA:3.20.20.70 132 315 7.6E-48 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD13_12775 e9150de53419ebcde7b3203125252187 315 Pfam PF02581 Thiamine monophosphate synthase 136 312 2.1E-40 T 17-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BJD13_12775 e9150de53419ebcde7b3203125252187 315 PRINTS PR00502 NUDIX hydrolase family signature 37 51 2.5E-8 T 17-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 BJD13_12775 e9150de53419ebcde7b3203125252187 315 PRINTS PR00502 NUDIX hydrolase family signature 51 66 2.5E-8 T 17-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 BJD13_12775 e9150de53419ebcde7b3203125252187 315 SUPERFAMILY SSF51391 118 313 5.36E-49 T 17-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BJD13_12775 e9150de53419ebcde7b3203125252187 315 Pfam PF00293 NUDIX domain 11 124 6.0E-19 T 17-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 BJD13_12775 e9150de53419ebcde7b3203125252187 315 SUPERFAMILY SSF55811 6 131 6.63E-35 T 17-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BJD13_12775 e9150de53419ebcde7b3203125252187 315 Gene3D G3DSA:3.90.79.10 5 131 1.8E-34 T 17-10-2018 BJD13_18460 83e54f2c2a96b422a084827642a52764 191 Gene3D G3DSA:3.40.1730.10 7 175 8.5E-42 T 17-10-2018 IPR038225 T6S-associated protein TagF superfamily BJD13_18460 83e54f2c2a96b422a084827642a52764 191 Pfam PF09867 Uncharacterized protein conserved in bacteria (DUF2094) 10 138 1.1E-32 T 17-10-2018 IPR017748 T6S-associated protein TagF BJD13_18460 83e54f2c2a96b422a084827642a52764 191 PIRSF PIRSF029287 3 188 4.4E-60 T 17-10-2018 IPR017748 T6S-associated protein TagF BJD13_18460 83e54f2c2a96b422a084827642a52764 191 TIGRFAM TIGR03373 VI_minor_4: type VI secretion-associated protein, BMA_A0400 family 10 138 6.9E-39 T 17-10-2018 IPR017748 T6S-associated protein TagF BJD13_19520 8a225dbf094fb90045f0d9abe8195c51 534 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 20 521 5.3E-208 T 17-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 BJD13_19520 8a225dbf094fb90045f0d9abe8195c51 534 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 247 301 - T 17-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_19520 8a225dbf094fb90045f0d9abe8195c51 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 165 183 4.3E-124 T 17-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_19520 8a225dbf094fb90045f0d9abe8195c51 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 93 117 4.3E-124 T 17-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_19520 8a225dbf094fb90045f0d9abe8195c51 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 194 213 4.3E-124 T 17-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_19520 8a225dbf094fb90045f0d9abe8195c51 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 19 44 4.3E-124 T 17-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_19520 8a225dbf094fb90045f0d9abe8195c51 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 136 148 4.3E-124 T 17-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_19520 8a225dbf094fb90045f0d9abe8195c51 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 66 89 4.3E-124 T 17-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_19520 8a225dbf094fb90045f0d9abe8195c51 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 315 336 4.3E-124 T 17-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_19520 8a225dbf094fb90045f0d9abe8195c51 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 428 449 4.3E-124 T 17-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_19520 8a225dbf094fb90045f0d9abe8195c51 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 350 368 4.3E-124 T 17-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_19520 8a225dbf094fb90045f0d9abe8195c51 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 245 266 4.3E-124 T 17-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_19520 8a225dbf094fb90045f0d9abe8195c51 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 378 397 4.3E-124 T 17-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_19520 8a225dbf094fb90045f0d9abe8195c51 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 291 306 4.3E-124 T 17-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_19520 8a225dbf094fb90045f0d9abe8195c51 534 Gene3D G3DSA:1.20.210.10 5 526 2.9E-215 T 17-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_19520 8a225dbf094fb90045f0d9abe8195c51 534 SUPERFAMILY SSF81442 17 522 7.59E-189 T 17-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_19520 8a225dbf094fb90045f0d9abe8195c51 534 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 28 469 3.9E-149 T 17-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_09130 0eb7f26a79acf7a9b7cf37004c948c9e 396 Gene3D G3DSA:2.40.50.100 67 212 6.4E-76 T 17-10-2018 BJD13_09130 0eb7f26a79acf7a9b7cf37004c948c9e 396 Gene3D G3DSA:2.40.30.170 61 288 6.4E-76 T 17-10-2018 BJD13_09130 0eb7f26a79acf7a9b7cf37004c948c9e 396 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 69 298 9.5E-15 T 17-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BJD13_09130 0eb7f26a79acf7a9b7cf37004c948c9e 396 SUPERFAMILY SSF111369 56 302 1.83E-72 T 17-10-2018 BJD13_09130 0eb7f26a79acf7a9b7cf37004c948c9e 396 Gene3D G3DSA:1.10.287.470 102 175 6.4E-76 T 17-10-2018 BJD13_09130 0eb7f26a79acf7a9b7cf37004c948c9e 396 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 43 379 3.5E-82 T 17-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 BJD13_09130 0eb7f26a79acf7a9b7cf37004c948c9e 396 Gene3D G3DSA:2.40.420.20 289 381 2.3E-22 T 17-10-2018 BJD13_18175 c4660897266676925b9f2c7ad87dd20e 523 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 44 129 5.9E-19 T 17-10-2018 IPR032093 Phospholipase D, N-terminal BJD13_18175 c4660897266676925b9f2c7ad87dd20e 523 Pfam PF09423 PhoD-like phosphatase 159 502 6.0E-82 T 17-10-2018 IPR018946 Alkaline phosphatase D-related BJD13_18175 c4660897266676925b9f2c7ad87dd20e 523 SUPERFAMILY SSF56300 138 515 1.45E-44 T 17-10-2018 BJD13_18175 c4660897266676925b9f2c7ad87dd20e 523 Gene3D G3DSA:3.60.21.70 157 485 3.7E-65 T 17-10-2018 IPR038607 PhoD-like superfamily BJD13_18175 c4660897266676925b9f2c7ad87dd20e 523 Gene3D G3DSA:2.60.40.380 38 135 3.8E-6 T 17-10-2018 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 BJD13_00220 8053bf13b0c391d622e3a45559c9a3d7 328 Hamap MF_00737 Formimidoylglutamase [hutG]. 8 313 37.733 T 17-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 BJD13_00220 8053bf13b0c391d622e3a45559c9a3d7 328 TIGRFAM TIGR01227 hutG: formimidoylglutamase 13 312 2.4E-91 T 17-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 BJD13_00220 8053bf13b0c391d622e3a45559c9a3d7 328 Pfam PF00491 Arginase family 43 311 1.0E-53 T 17-10-2018 IPR006035 Ureohydrolase GO:0046872 BJD13_00220 8053bf13b0c391d622e3a45559c9a3d7 328 Gene3D G3DSA:3.40.800.10 6 320 1.5E-101 T 17-10-2018 BJD13_00220 8053bf13b0c391d622e3a45559c9a3d7 328 SUPERFAMILY SSF52768 13 315 1.21E-74 T 17-10-2018 IPR023696 Ureohydrolase domain superfamily BJD13_09395 3237ff4eeb4f713abaa6b9563807da9a 564 Gene3D G3DSA:3.40.50.620 198 522 2.8E-106 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD13_09395 3237ff4eeb4f713abaa6b9563807da9a 564 PIRSF PIRSF001589 1 372 7.3E-105 T 17-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 BJD13_09395 3237ff4eeb4f713abaa6b9563807da9a 564 PIRSF PIRSF001589 366 524 9.1E-28 T 17-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 BJD13_09395 3237ff4eeb4f713abaa6b9563807da9a 564 Pfam PF00733 Asparagine synthase 214 370 6.5E-57 T 17-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 BJD13_09395 3237ff4eeb4f713abaa6b9563807da9a 564 SMART SM01172 5 210 0.0019 T 17-10-2018 IPR024286 Domain of unknown function DUF3700 BJD13_09395 3237ff4eeb4f713abaa6b9563807da9a 564 Pfam PF13537 Glutamine amidotransferase domain 50 169 9.9E-41 T 17-10-2018 IPR017932 Glutamine amidotransferase type 2 domain BJD13_09395 3237ff4eeb4f713abaa6b9563807da9a 564 SUPERFAMILY SSF52402 212 487 1.78E-74 T 17-10-2018 BJD13_09395 3237ff4eeb4f713abaa6b9563807da9a 564 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 375 1.2E-105 T 17-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 BJD13_09395 3237ff4eeb4f713abaa6b9563807da9a 564 Gene3D G3DSA:3.60.20.10 2 196 1.2E-63 T 17-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BJD13_09395 3237ff4eeb4f713abaa6b9563807da9a 564 SUPERFAMILY SSF56235 1 196 1.37E-55 T 17-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BJD13_21195 cad2b03d26b2e969b173196d4dc1ce37 351 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 4 335 8.5E-155 T 17-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 BJD13_21195 cad2b03d26b2e969b173196d4dc1ce37 351 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 323 3.4E-101 T 17-10-2018 IPR016040 NAD(P)-binding domain BJD13_21195 cad2b03d26b2e969b173196d4dc1ce37 351 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 17-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BJD13_21195 cad2b03d26b2e969b173196d4dc1ce37 351 SUPERFAMILY SSF51735 3 341 2.17E-93 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_21195 cad2b03d26b2e969b173196d4dc1ce37 351 Gene3D G3DSA:3.40.50.720 4 322 5.5E-130 T 17-10-2018 BJD13_21195 cad2b03d26b2e969b173196d4dc1ce37 351 Gene3D G3DSA:3.90.25.10 200 330 5.5E-130 T 17-10-2018 BJD13_20275 e22150c3387809025e04afb53af20541 74 Pfam PF11903 ParD-like antitoxin of type II bacterial toxin-antitoxin system 1 58 2.4E-24 T 17-10-2018 IPR021831 ParD-like antitoxin of type II bacterial toxin-antitoxin system BJD13_10895 c489a6edd31647cb783e9112d58240f3 460 SUPERFAMILY SSF116734 6 213 6.38E-32 T 17-10-2018 BJD13_10895 c489a6edd31647cb783e9112d58240f3 460 SUPERFAMILY SSF116734 225 433 8.5E-34 T 17-10-2018 BJD13_10895 c489a6edd31647cb783e9112d58240f3 460 Pfam PF01420 Type I restriction modification DNA specificity domain 225 400 3.6E-9 T 17-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 BJD13_10895 c489a6edd31647cb783e9112d58240f3 460 Pfam PF01420 Type I restriction modification DNA specificity domain 64 193 4.0E-10 T 17-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 BJD13_10895 c489a6edd31647cb783e9112d58240f3 460 Gene3D G3DSA:3.90.220.20 223 424 2.6E-35 T 17-10-2018 BJD13_10895 c489a6edd31647cb783e9112d58240f3 460 Gene3D G3DSA:3.90.220.20 4 213 2.3E-34 T 17-10-2018 BJD13_16305 50d59e040d14086a308e9b05eb2ded91 285 SUPERFAMILY SSF51735 2 274 1.55E-55 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_16305 50d59e040d14086a308e9b05eb2ded91 285 Pfam PF05368 NmrA-like family 2 216 1.5E-27 T 17-10-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 BJD13_16305 50d59e040d14086a308e9b05eb2ded91 285 Gene3D G3DSA:3.40.50.720 3 265 4.5E-73 T 17-10-2018 BJD13_16305 50d59e040d14086a308e9b05eb2ded91 285 Gene3D G3DSA:3.90.25.10 135 266 4.5E-73 T 17-10-2018 BJD13_17755 ba4c7ae11a0d7ff567fd69f15eb150bf 248 Gene3D G3DSA:1.10.357.10 32 223 2.8E-31 T 17-10-2018 BJD13_17755 ba4c7ae11a0d7ff567fd69f15eb150bf 248 SUPERFAMILY SSF46689 27 98 1.08E-13 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_17755 ba4c7ae11a0d7ff567fd69f15eb150bf 248 ProSitePatterns PS01081 TetR-type HTH domain signature. 49 80 - T 17-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BJD13_17755 ba4c7ae11a0d7ff567fd69f15eb150bf 248 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 58 81 8.9E-6 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD13_17755 ba4c7ae11a0d7ff567fd69f15eb150bf 248 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 50 8.9E-6 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD13_17755 ba4c7ae11a0d7ff567fd69f15eb150bf 248 Pfam PF00440 Bacterial regulatory proteins, tetR family 37 83 3.5E-12 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD13_22565 065fcf1cef0eac4b41ff7cd958a366a6 978 SUPERFAMILY SSF56935 31 978 3.81E-89 T 17-10-2018 BJD13_22565 065fcf1cef0eac4b41ff7cd958a366a6 978 Pfam PF00593 TonB dependent receptor 443 977 3.1E-34 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_22565 065fcf1cef0eac4b41ff7cd958a366a6 978 Pfam PF07715 TonB-dependent Receptor Plug Domain 61 171 4.6E-14 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_22565 065fcf1cef0eac4b41ff7cd958a366a6 978 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 42 978 4.3E-245 T 17-10-2018 IPR010104 Bacterial TonB-dependent receptor BJD13_22565 065fcf1cef0eac4b41ff7cd958a366a6 978 Gene3D G3DSA:2.40.170.20 561 978 7.0E-42 T 17-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BJD13_22565 065fcf1cef0eac4b41ff7cd958a366a6 978 Gene3D G3DSA:2.170.130.10 45 176 9.1E-14 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_01315 9b08e940cccaeda27e2bca7695c53751 123 Pfam PF00239 Resolvase, N terminal domain 4 123 4.7E-41 T 17-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 BJD13_01315 9b08e940cccaeda27e2bca7695c53751 123 SUPERFAMILY SSF53041 1 123 5.36E-41 T 17-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 BJD13_01315 9b08e940cccaeda27e2bca7695c53751 123 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 17-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 BJD13_01315 9b08e940cccaeda27e2bca7695c53751 123 SMART SM00857 3 123 2.7E-49 T 17-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 BJD13_01315 9b08e940cccaeda27e2bca7695c53751 123 Gene3D G3DSA:3.40.50.1390 2 123 1.2E-48 T 17-10-2018 BJD13_06665 56c530c9cad9d44011d25ede9ee26279 697 PIRSF PIRSF005419 9 697 3.2E-235 T 17-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BJD13_06665 56c530c9cad9d44011d25ede9ee26279 697 Pfam PF00771 FHIPEP family 30 687 2.9E-257 T 17-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BJD13_06665 56c530c9cad9d44011d25ede9ee26279 697 Gene3D G3DSA:1.10.490.80 602 696 1.7E-11 T 17-10-2018 BJD13_06665 56c530c9cad9d44011d25ede9ee26279 697 Gene3D G3DSA:1.10.8.540 511 599 2.7E-23 T 17-10-2018 BJD13_06665 56c530c9cad9d44011d25ede9ee26279 697 Gene3D G3DSA:3.40.30.60 367 510 1.4E-53 T 17-10-2018 BJD13_06665 56c530c9cad9d44011d25ede9ee26279 697 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 23 696 9.1E-252 T 17-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 BJD13_06665 56c530c9cad9d44011d25ede9ee26279 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 37 50 4.7E-50 T 17-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BJD13_06665 56c530c9cad9d44011d25ede9ee26279 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 141 157 4.7E-50 T 17-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BJD13_06665 56c530c9cad9d44011d25ede9ee26279 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 160 178 4.7E-50 T 17-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BJD13_06665 56c530c9cad9d44011d25ede9ee26279 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 74 93 4.7E-50 T 17-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BJD13_06665 56c530c9cad9d44011d25ede9ee26279 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 190 207 4.7E-50 T 17-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BJD13_06665 56c530c9cad9d44011d25ede9ee26279 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 241 255 4.7E-50 T 17-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BJD13_19090 4401ac17bb7ef06334961813bf0709e3 229 SMART SM00382 33 221 7.0E-17 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_19090 4401ac17bb7ef06334961813bf0709e3 229 Gene3D G3DSA:3.40.50.300 1 226 6.2E-71 T 17-10-2018 BJD13_19090 4401ac17bb7ef06334961813bf0709e3 229 Pfam PF00005 ABC transporter 24 172 4.7E-34 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD13_19090 4401ac17bb7ef06334961813bf0709e3 229 SUPERFAMILY SSF52540 4 224 2.0E-71 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_19090 4401ac17bb7ef06334961813bf0709e3 229 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD13_00130 8dce86eea7dc0e147db207efc7296a65 584 Gene3D G3DSA:3.40.50.300 2 247 2.7E-47 T 17-10-2018 BJD13_00130 8dce86eea7dc0e147db207efc7296a65 584 Gene3D G3DSA:1.10.10.160 99 166 2.7E-47 T 17-10-2018 IPR013986 DExx box DNA helicase domain superfamily BJD13_00130 8dce86eea7dc0e147db207efc7296a65 584 Gene3D G3DSA:1.10.486.10 356 497 2.9E-57 T 17-10-2018 BJD13_00130 8dce86eea7dc0e147db207efc7296a65 584 Pfam PF13361 UvrD-like helicase C-terminal domain 256 568 3.4E-29 T 17-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 BJD13_00130 8dce86eea7dc0e147db207efc7296a65 584 SUPERFAMILY SSF52540 2 580 1.17E-97 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_00130 8dce86eea7dc0e147db207efc7296a65 584 Pfam PF13245 AAA domain 6 235 7.8E-23 T 17-10-2018 BJD13_00130 8dce86eea7dc0e147db207efc7296a65 584 Gene3D G3DSA:3.40.50.300 261 580 2.9E-57 T 17-10-2018 BJD13_24010 7ed7c378cc58ce366a5580484393cbb1 829 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 185 387 1.5E-55 T 17-10-2018 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 BJD13_24010 7ed7c378cc58ce366a5580484393cbb1 829 SUPERFAMILY SSF52540 388 769 2.72E-33 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_24010 7ed7c378cc58ce366a5580484393cbb1 829 TIGRFAM TIGR00929 VirB4_CagE: type IV secretion/conjugal transfer ATPase, VirB4 family 13 817 1.1E-240 T 17-10-2018 IPR004346 CagE, TrbE, VirB component of type IV transporter system GO:0005524 BJD13_09470 77cbf56a625773c6de43f3249df7fc37 240 Gene3D G3DSA:3.40.1160.10 2 238 8.6E-80 T 17-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BJD13_09470 77cbf56a625773c6de43f3249df7fc37 240 SUPERFAMILY SSF53633 5 236 4.19E-73 T 17-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BJD13_09470 77cbf56a625773c6de43f3249df7fc37 240 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 6 237 3.3E-98 T 17-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 BJD13_09470 77cbf56a625773c6de43f3249df7fc37 240 PIRSF PIRSF005650 1 240 3.7E-94 T 17-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 BJD13_09470 77cbf56a625773c6de43f3249df7fc37 240 Pfam PF00696 Amino acid kinase family 8 215 8.9E-30 T 17-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 BJD13_09470 77cbf56a625773c6de43f3249df7fc37 240 Hamap MF_01220_B Uridylate kinase [pyrH]. 4 237 45.185 T 17-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 BJD13_20225 e39239f103a94d5b45ebb1890797d401 280 Pfam PF05929 Phage capsid scaffolding protein (GPO) serine peptidase 10 280 1.4E-104 T 17-10-2018 IPR009228 Capsid scaffolding protein GpO GO:0019069 BJD13_06545 2d510b1df71ad7e4bcb51883eadc0739 207 Gene3D G3DSA:2.160.10.10 64 194 2.4E-21 T 17-10-2018 BJD13_06545 2d510b1df71ad7e4bcb51883eadc0739 207 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 134 168 1.8E-6 T 17-10-2018 IPR001451 Hexapeptide repeat BJD13_06545 2d510b1df71ad7e4bcb51883eadc0739 207 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 97 131 4.4E-5 T 17-10-2018 IPR001451 Hexapeptide repeat BJD13_06545 2d510b1df71ad7e4bcb51883eadc0739 207 SUPERFAMILY SSF51161 52 192 2.77E-27 T 17-10-2018 IPR011004 Trimeric LpxA-like superfamily BJD13_00275 2747799a2a1b519147f35d6fa32b79e7 903 Pfam PF07715 TonB-dependent Receptor Plug Domain 55 169 4.8E-23 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_00275 2747799a2a1b519147f35d6fa32b79e7 903 SUPERFAMILY SSF56935 39 903 1.05E-99 T 17-10-2018 BJD13_00275 2747799a2a1b519147f35d6fa32b79e7 903 Gene3D G3DSA:2.170.130.10 35 173 3.0E-37 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_00275 2747799a2a1b519147f35d6fa32b79e7 903 Pfam PF00593 TonB dependent receptor 348 901 2.3E-45 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_13650 2b9aa23844858808c311a76ee3bc97a1 478 SUPERFAMILY SSF49384 392 477 9.77E-21 T 17-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 BJD13_13650 2b9aa23844858808c311a76ee3bc97a1 478 SMART SM00637 398 478 2.2E-11 T 17-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 BJD13_13650 2b9aa23844858808c311a76ee3bc97a1 478 SUPERFAMILY SSF51445 22 372 7.29E-83 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily BJD13_13650 2b9aa23844858808c311a76ee3bc97a1 478 Pfam PF00553 Cellulose binding domain 405 476 1.2E-15 T 17-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 BJD13_13650 2b9aa23844858808c311a76ee3bc97a1 478 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 174 183 - T 17-10-2018 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 BJD13_13650 2b9aa23844858808c311a76ee3bc97a1 478 Gene3D G3DSA:3.20.20.80 27 370 1.6E-124 T 17-10-2018 BJD13_13650 2b9aa23844858808c311a76ee3bc97a1 478 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 35 342 9.1E-58 T 17-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 BJD13_13650 2b9aa23844858808c311a76ee3bc97a1 478 Gene3D G3DSA:2.60.40.290 397 478 2.3E-17 T 17-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 BJD13_08680 4a3ba89c7a6e0a8455ca1613bdfa9a18 267 Pfam PF00293 NUDIX domain 113 216 7.6E-12 T 17-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 BJD13_08680 4a3ba89c7a6e0a8455ca1613bdfa9a18 267 Pfam PF06945 Protein of unknown function (DUF1289) 15 56 2.6E-18 T 17-10-2018 IPR010710 Protein of unknown function DUF1289 BJD13_08680 4a3ba89c7a6e0a8455ca1613bdfa9a18 267 Gene3D G3DSA:3.90.79.10 90 262 2.2E-47 T 17-10-2018 BJD13_08680 4a3ba89c7a6e0a8455ca1613bdfa9a18 267 SUPERFAMILY SSF55811 107 256 7.04E-32 T 17-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BJD13_02215 5cc082b7af5e1b3db8122a3588185306 285 SUPERFAMILY SSF51182 10 285 2.33E-89 T 17-10-2018 IPR011051 RmlC-like cupin domain superfamily BJD13_02215 5cc082b7af5e1b3db8122a3588185306 285 PIRSF PIRSF006232 7 285 7.0E-99 T 17-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 BJD13_02215 5cc082b7af5e1b3db8122a3588185306 285 Pfam PF02678 Pirin 26 126 1.7E-37 T 17-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 BJD13_02215 5cc082b7af5e1b3db8122a3588185306 285 Gene3D G3DSA:2.60.120.10 22 281 1.6E-101 T 17-10-2018 IPR014710 RmlC-like jelly roll fold BJD13_02215 5cc082b7af5e1b3db8122a3588185306 285 Pfam PF05726 Pirin C-terminal cupin domain 181 285 1.0E-30 T 17-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 BJD13_02215 5cc082b7af5e1b3db8122a3588185306 285 Gene3D G3DSA:2.60.120.10 148 255 1.6E-101 T 17-10-2018 IPR014710 RmlC-like jelly roll fold BJD13_21140 1667bce9b13f0881724bcc61dfa1a73e 439 Pfam PF00005 ABC transporter 46 178 1.1E-19 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD13_21140 1667bce9b13f0881724bcc61dfa1a73e 439 Gene3D G3DSA:2.70.50.60 283 430 3.8E-43 T 17-10-2018 BJD13_21140 1667bce9b13f0881724bcc61dfa1a73e 439 Pfam PF14524 Wzt C-terminal domain 293 430 3.6E-27 T 17-10-2018 IPR029439 Wzt, C-terminal BJD13_21140 1667bce9b13f0881724bcc61dfa1a73e 439 SUPERFAMILY SSF52540 38 240 1.85E-46 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_21140 1667bce9b13f0881724bcc61dfa1a73e 439 SMART SM00382 55 243 3.1E-13 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_21140 1667bce9b13f0881724bcc61dfa1a73e 439 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD13_21140 1667bce9b13f0881724bcc61dfa1a73e 439 Gene3D G3DSA:3.40.50.300 33 246 3.3E-44 T 17-10-2018 BJD13_16335 10a9ad8997743f5bae2fa46e5b62c352 183 Gene3D G3DSA:3.30.420.10 3 181 5.2E-33 T 17-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BJD13_16335 10a9ad8997743f5bae2fa46e5b62c352 183 Pfam PF00929 Exonuclease 8 172 1.7E-9 T 17-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BJD13_16335 10a9ad8997743f5bae2fa46e5b62c352 183 SUPERFAMILY SSF53098 4 178 1.23E-30 T 17-10-2018 IPR012337 Ribonuclease H-like superfamily BJD13_16335 10a9ad8997743f5bae2fa46e5b62c352 183 SMART SM00479 6 181 1.7E-11 T 17-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BJD13_03895 1b88509e9d41b9c4a721e8fa7864c00e 852 SUPERFAMILY SSF56935 35 850 2.59E-91 T 17-10-2018 BJD13_03895 1b88509e9d41b9c4a721e8fa7864c00e 852 Pfam PF00593 TonB dependent receptor 366 850 3.0E-35 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_03895 1b88509e9d41b9c4a721e8fa7864c00e 852 Gene3D G3DSA:2.170.130.10 51 171 4.7E-15 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_03895 1b88509e9d41b9c4a721e8fa7864c00e 852 Gene3D G3DSA:2.40.170.20 244 851 5.7E-48 T 17-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BJD13_03895 1b88509e9d41b9c4a721e8fa7864c00e 852 Pfam PF07715 TonB-dependent Receptor Plug Domain 65 167 4.8E-16 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_03895 1b88509e9d41b9c4a721e8fa7864c00e 852 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 43 851 4.0E-227 T 17-10-2018 IPR010104 Bacterial TonB-dependent receptor BJD13_04305 dc7ed61eb88fe0177779d6aef9d20412 361 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 192 352 1.5E-19 T 17-10-2018 IPR000160 GGDEF domain BJD13_04305 dc7ed61eb88fe0177779d6aef9d20412 361 Pfam PF00990 Diguanylate cyclase, GGDEF domain 195 350 3.9E-22 T 17-10-2018 IPR000160 GGDEF domain BJD13_04305 dc7ed61eb88fe0177779d6aef9d20412 361 Gene3D G3DSA:3.30.450.40 46 191 1.2E-13 T 17-10-2018 IPR029016 GAF-like domain superfamily BJD13_04305 dc7ed61eb88fe0177779d6aef9d20412 361 SMART SM00267 184 354 7.8E-25 T 17-10-2018 IPR000160 GGDEF domain BJD13_04305 dc7ed61eb88fe0177779d6aef9d20412 361 SUPERFAMILY SSF55781 53 187 3.64E-22 T 17-10-2018 BJD13_04305 dc7ed61eb88fe0177779d6aef9d20412 361 SMART SM00065 48 192 3.4E-5 T 17-10-2018 IPR003018 GAF domain GO:0005515 BJD13_04305 dc7ed61eb88fe0177779d6aef9d20412 361 SUPERFAMILY SSF55073 200 355 4.32E-25 T 17-10-2018 IPR029787 Nucleotide cyclase BJD13_04305 dc7ed61eb88fe0177779d6aef9d20412 361 Gene3D G3DSA:3.30.70.270 192 355 5.7E-30 T 17-10-2018 BJD13_05590 db9251b588754fc127bed1573c753778 158 SUPERFAMILY SSF54975 16 128 5.56E-31 T 17-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 BJD13_05590 db9251b588754fc127bed1573c753778 158 Pfam PF04940 Sensors of blue-light using FAD 17 107 5.4E-26 T 17-10-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 BJD13_05590 db9251b588754fc127bed1573c753778 158 Gene3D G3DSA:3.30.70.3200 9 136 4.1E-30 T 17-10-2018 BJD13_05590 db9251b588754fc127bed1573c753778 158 SMART SM01034 16 108 6.0E-36 T 17-10-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 BJD13_13170 0d4f2417d62001e87d92b53d381eaf9a 236 Pfam PF01203 Type II secretion system (T2SS), protein N 34 220 3.5E-15 T 17-10-2018 IPR022792 Type II secretion system, protein N BJD13_12200 ae3c98f7c01c574ff049956ab1fa9a88 785 Pfam PF07793 Protein of unknown function (DUF1631) 11 775 1.4E-207 T 17-10-2018 IPR012434 Protein of unknown function DUF1631 BJD13_12500 b17d0ad4c512cb7dab207c582da6f615 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 3.2E-49 T 17-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BJD13_12500 b17d0ad4c512cb7dab207c582da6f615 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 3.2E-49 T 17-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BJD13_12500 b17d0ad4c512cb7dab207c582da6f615 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 3.2E-49 T 17-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BJD13_12500 b17d0ad4c512cb7dab207c582da6f615 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 3.2E-49 T 17-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BJD13_12500 b17d0ad4c512cb7dab207c582da6f615 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 3.2E-49 T 17-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BJD13_12500 b17d0ad4c512cb7dab207c582da6f615 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 40.137 T 17-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BJD13_12500 b17d0ad4c512cb7dab207c582da6f615 264 Pfam PF00303 Thymidylate synthase 3 264 1.4E-121 T 17-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BJD13_12500 b17d0ad4c512cb7dab207c582da6f615 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 17-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BJD13_12500 b17d0ad4c512cb7dab207c582da6f615 264 SUPERFAMILY SSF55831 3 264 2.88E-127 T 17-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BJD13_12500 b17d0ad4c512cb7dab207c582da6f615 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 264 5.8E-97 T 17-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BJD13_12500 b17d0ad4c512cb7dab207c582da6f615 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 3 84 3.4E-41 T 17-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BJD13_12500 b17d0ad4c512cb7dab207c582da6f615 264 Gene3D G3DSA:3.30.572.10 1 264 2.3E-129 T 17-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BJD13_08290 7433e1878140f25123800121b3f90264 154 Gene3D G3DSA:1.10.10.10 7 151 2.6E-27 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_08290 7433e1878140f25123800121b3f90264 154 Pfam PF01047 MarR family 50 97 5.7E-7 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD13_08290 7433e1878140f25123800121b3f90264 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 93 109 1.0E-8 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD13_08290 7433e1878140f25123800121b3f90264 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 123 143 1.0E-8 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD13_08290 7433e1878140f25123800121b3f90264 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 74 89 1.0E-8 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD13_08290 7433e1878140f25123800121b3f90264 154 SUPERFAMILY SSF46785 15 149 2.34E-26 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_08290 7433e1878140f25123800121b3f90264 154 SMART SM00347 33 133 4.7E-13 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD13_03670 d696a64976ba038ae003e8a7d62bdd7a 178 SUPERFAMILY SSF50814 21 172 2.09E-39 T 17-10-2018 IPR012674 Calycin BJD13_03670 d696a64976ba038ae003e8a7d62bdd7a 178 PRINTS PR01171 Bacterial lipocalin signature 138 149 4.1E-7 T 17-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 BJD13_03670 d696a64976ba038ae003e8a7d62bdd7a 178 PRINTS PR01171 Bacterial lipocalin signature 30 44 4.1E-7 T 17-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 BJD13_03670 d696a64976ba038ae003e8a7d62bdd7a 178 PRINTS PR01171 Bacterial lipocalin signature 123 131 4.1E-7 T 17-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 BJD13_03670 d696a64976ba038ae003e8a7d62bdd7a 178 PRINTS PR01171 Bacterial lipocalin signature 165 175 4.1E-7 T 17-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 BJD13_03670 d696a64976ba038ae003e8a7d62bdd7a 178 Pfam PF08212 Lipocalin-like domain 30 174 2.6E-53 T 17-10-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain BJD13_03670 d696a64976ba038ae003e8a7d62bdd7a 178 ProSitePatterns PS00213 Lipocalin signature. 31 42 - T 17-10-2018 IPR022272 Lipocalin family conserved site BJD13_03670 d696a64976ba038ae003e8a7d62bdd7a 178 PIRSF PIRSF036893 1 177 7.6E-62 T 17-10-2018 IPR022271 Lipocalin, ApoD type BJD13_03670 d696a64976ba038ae003e8a7d62bdd7a 178 Gene3D G3DSA:2.40.128.20 15 175 4.1E-46 T 17-10-2018 IPR012674 Calycin BJD13_11120 d4d6deb55d76b7c3494353e3faee6d4b 191 Gene3D G3DSA:3.90.950.10 3 189 1.1E-55 T 17-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like BJD13_11120 d4d6deb55d76b7c3494353e3faee6d4b 191 Pfam PF02545 Maf-like protein 4 185 1.6E-42 T 17-10-2018 IPR003697 Maf-like protein GO:0047429 BJD13_11120 d4d6deb55d76b7c3494353e3faee6d4b 191 SUPERFAMILY SSF52972 1 185 1.44E-54 T 17-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like BJD13_11120 d4d6deb55d76b7c3494353e3faee6d4b 191 PIRSF PIRSF006305 1 190 5.0E-43 T 17-10-2018 IPR003697 Maf-like protein GO:0047429 BJD13_11120 d4d6deb55d76b7c3494353e3faee6d4b 191 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 184 2.3E-46 T 17-10-2018 IPR003697 Maf-like protein GO:0047429 BJD13_11120 d4d6deb55d76b7c3494353e3faee6d4b 191 Hamap MF_00528 Septum formation protein Maf [maf]. 4 190 28.066 T 17-10-2018 IPR003697 Maf-like protein GO:0047429 BJD13_19435 525850940dcc346884476c15405f5229 265 PIRSF PIRSF009320 90 257 2.6E-8 T 17-10-2018 BJD13_19435 525850940dcc346884476c15405f5229 265 PIRSF PIRSF009320 2 60 3.0E-15 T 17-10-2018 BJD13_19435 525850940dcc346884476c15405f5229 265 Gene3D G3DSA:3.40.50.300 1 263 1.7E-79 T 17-10-2018 BJD13_19435 525850940dcc346884476c15405f5229 265 Pfam PF13614 AAA domain 3 177 1.3E-63 T 17-10-2018 IPR025669 AAA domain BJD13_19435 525850940dcc346884476c15405f5229 265 SUPERFAMILY SSF52540 1 252 2.24E-64 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_06170 ef2bd05eb6963e420cc768747bb66689 389 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 17-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 BJD13_06170 ef2bd05eb6963e420cc768747bb66689 389 SUPERFAMILY SSF51735 162 351 1.18E-60 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_06170 ef2bd05eb6963e420cc768747bb66689 389 Pfam PF00107 Zinc-binding dehydrogenase 196 266 4.8E-14 T 17-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 BJD13_06170 ef2bd05eb6963e420cc768747bb66689 389 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 149 3.8E-25 T 17-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 BJD13_06170 ef2bd05eb6963e420cc768747bb66689 389 Gene3D G3DSA:3.40.50.720 177 340 9.5E-122 T 17-10-2018 BJD13_06170 ef2bd05eb6963e420cc768747bb66689 389 SUPERFAMILY SSF50129 2 189 1.16E-54 T 17-10-2018 IPR011032 GroES-like superfamily BJD13_06170 ef2bd05eb6963e420cc768747bb66689 389 Gene3D G3DSA:3.90.180.10 10 375 9.5E-122 T 17-10-2018 BJD13_06170 ef2bd05eb6963e420cc768747bb66689 389 Pfam PF13823 Alcohol dehydrogenase GroES-associated 2 22 2.7E-8 T 17-10-2018 IPR027399 Alcohol dehydrogenase GroES-associated BJD13_13690 79d06ae9174d617f339b5e950c1a0dfe 557 ProSitePatterns PS00927 Trehalase signature 1. 155 168 - T 17-10-2018 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 BJD13_13690 79d06ae9174d617f339b5e950c1a0dfe 557 Hamap MF_01060 Periplasmic trehalase [treA]. 1 538 84.152 T 17-10-2018 IPR023720 Trehalase, periplasmic GO:0004555|GO:0005993|GO:0042597|GO:0071474 KEGG: 00500+3.2.1.28 BJD13_13690 79d06ae9174d617f339b5e950c1a0dfe 557 Pfam PF01204 Trehalase 62 536 6.8E-170 T 17-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 BJD13_13690 79d06ae9174d617f339b5e950c1a0dfe 557 ProSitePatterns PS00928 Trehalase signature 2. 450 459 - T 17-10-2018 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 BJD13_13690 79d06ae9174d617f339b5e950c1a0dfe 557 Gene3D G3DSA:1.50.10.10 44 549 2.7E-174 T 17-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 BJD13_13690 79d06ae9174d617f339b5e950c1a0dfe 557 PRINTS PR00744 Glycosyl hydrolase family 37 signature 306 323 1.5E-41 T 17-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 BJD13_13690 79d06ae9174d617f339b5e950c1a0dfe 557 PRINTS PR00744 Glycosyl hydrolase family 37 signature 272 289 1.5E-41 T 17-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 BJD13_13690 79d06ae9174d617f339b5e950c1a0dfe 557 PRINTS PR00744 Glycosyl hydrolase family 37 signature 338 355 1.5E-41 T 17-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 BJD13_13690 79d06ae9174d617f339b5e950c1a0dfe 557 PRINTS PR00744 Glycosyl hydrolase family 37 signature 443 459 1.5E-41 T 17-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 BJD13_13690 79d06ae9174d617f339b5e950c1a0dfe 557 PRINTS PR00744 Glycosyl hydrolase family 37 signature 197 215 1.5E-41 T 17-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 BJD13_13690 79d06ae9174d617f339b5e950c1a0dfe 557 PRINTS PR00744 Glycosyl hydrolase family 37 signature 520 533 1.5E-41 T 17-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 BJD13_13690 79d06ae9174d617f339b5e950c1a0dfe 557 SUPERFAMILY SSF48208 45 536 1.22E-157 T 17-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 BJD13_19315 0e46f558c4c332db635282a5b7439263 218 Gene3D G3DSA:1.10.510.10 97 153 2.3E-8 T 17-10-2018 BJD13_19315 0e46f558c4c332db635282a5b7439263 218 Pfam PF01163 RIO1 family 54 150 1.2E-4 T 17-10-2018 BJD13_19315 0e46f558c4c332db635282a5b7439263 218 Gene3D G3DSA:3.30.200.20 34 96 2.3E-8 T 17-10-2018 BJD13_19315 0e46f558c4c332db635282a5b7439263 218 SUPERFAMILY SSF56112 31 162 3.14E-19 T 17-10-2018 IPR011009 Protein kinase-like domain superfamily BJD13_00750 03669bd12bd37c867d9fba2aa269ecc4 163 Gene3D G3DSA:1.10.10.2830 9 97 2.1E-7 T 17-10-2018 BJD13_00750 03669bd12bd37c867d9fba2aa269ecc4 163 SUPERFAMILY SSF109709 19 96 8.63E-7 T 17-10-2018 BJD13_00610 0639fa1d4f204f884eb00070737b7c62 233 Pfam PF08808 RES domain 22 176 5.9E-8 T 17-10-2018 IPR014914 RES domain BJD13_08115 0bec73fad612b613086afd1500e1ee2e 376 Pfam PF13439 Glycosyltransferase Family 4 29 142 3.4E-7 T 17-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 BJD13_08115 0bec73fad612b613086afd1500e1ee2e 376 Gene3D G3DSA:3.40.50.2000 30 364 3.9E-37 T 17-10-2018 BJD13_08115 0bec73fad612b613086afd1500e1ee2e 376 Gene3D G3DSA:3.40.50.2000 173 351 3.9E-37 T 17-10-2018 BJD13_08115 0bec73fad612b613086afd1500e1ee2e 376 SUPERFAMILY SSF53756 29 366 3.81E-43 T 17-10-2018 BJD13_08115 0bec73fad612b613086afd1500e1ee2e 376 Pfam PF00534 Glycosyl transferases group 1 188 343 4.7E-14 T 17-10-2018 IPR001296 Glycosyl transferase, family 1 BJD13_13315 3a24ff9791fc1084ce8e8383c3a64d7c 354 Pfam PF01555 DNA methylase 42 90 8.0E-9 T 17-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 BJD13_13315 3a24ff9791fc1084ce8e8383c3a64d7c 354 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 52 70 7.0E-6 T 17-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 BJD13_13315 3a24ff9791fc1084ce8e8383c3a64d7c 354 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 75 95 7.0E-6 T 17-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 BJD13_13315 3a24ff9791fc1084ce8e8383c3a64d7c 354 SUPERFAMILY SSF53335 50 174 4.86E-22 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_13315 3a24ff9791fc1084ce8e8383c3a64d7c 354 Gene3D G3DSA:3.40.50.150 106 250 1.1E-9 T 17-10-2018 BJD13_13315 3a24ff9791fc1084ce8e8383c3a64d7c 354 Gene3D G3DSA:3.40.50.150 39 103 9.1E-13 T 17-10-2018 BJD13_03645 c9b518f4461b299a3b93e8d2fa3205db 418 Gene3D G3DSA:3.40.50.2000 244 395 2.3E-22 T 17-10-2018 BJD13_03645 c9b518f4461b299a3b93e8d2fa3205db 418 SUPERFAMILY SSF53756 1 411 6.63E-65 T 17-10-2018 BJD13_03645 c9b518f4461b299a3b93e8d2fa3205db 418 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 299 377 1.3E-10 T 17-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 BJD13_03645 c9b518f4461b299a3b93e8d2fa3205db 418 Gene3D G3DSA:3.40.50.2000 1 243 3.5E-27 T 17-10-2018 BJD13_13085 ab769a2844f8c39a183145e685c2569c 207 Pfam PF01926 50S ribosome-binding GTPase 27 135 1.9E-18 T 17-10-2018 IPR006073 GTP binding domain GO:0005525 BJD13_13085 ab769a2844f8c39a183145e685c2569c 207 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 9 192 2.9E-68 T 17-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 BJD13_13085 ab769a2844f8c39a183145e685c2569c 207 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 13 197 26.371 T 17-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 BJD13_13085 ab769a2844f8c39a183145e685c2569c 207 SUPERFAMILY SSF52540 16 196 7.83E-34 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_13085 ab769a2844f8c39a183145e685c2569c 207 Gene3D G3DSA:3.40.50.300 2 199 1.6E-51 T 17-10-2018 BJD13_22125 0d37965a43d3e503fc6a0633d5aca6d3 180 SUPERFAMILY SSF101327 4 168 1.15E-38 T 17-10-2018 IPR036255 YgfB-like superfamily BJD13_22125 0d37965a43d3e503fc6a0633d5aca6d3 180 Gene3D G3DSA:1.20.120.740 1 177 4.1E-49 T 17-10-2018 BJD13_22125 0d37965a43d3e503fc6a0633d5aca6d3 180 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 2 180 30.409 T 17-10-2018 IPR011978 Uncharacterised protein family UPF0149 BJD13_22125 0d37965a43d3e503fc6a0633d5aca6d3 180 Pfam PF03695 Uncharacterised protein family (UPF0149) 15 167 4.1E-28 T 17-10-2018 IPR011978 Uncharacterised protein family UPF0149 BJD13_16010 c8109b58e45b80083ffb3c9fd5063802 200 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 86 96 - T 17-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BJD13_16010 c8109b58e45b80083ffb3c9fd5063802 200 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 177 188 - T 17-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BJD13_16010 c8109b58e45b80083ffb3c9fd5063802 200 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 55 188 5.6E-36 T 17-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BJD13_16010 c8109b58e45b80083ffb3c9fd5063802 200 SUPERFAMILY SSF49329 46 188 2.88E-40 T 17-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BJD13_16010 c8109b58e45b80083ffb3c9fd5063802 200 Gene3D G3DSA:2.60.40.200 44 192 1.7E-42 T 17-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BJD13_16010 c8109b58e45b80083ffb3c9fd5063802 200 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 86 108 2.0E-7 T 17-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BJD13_16010 c8109b58e45b80083ffb3c9fd5063802 200 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 163 189 2.0E-7 T 17-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BJD13_16010 c8109b58e45b80083ffb3c9fd5063802 200 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 123 132 2.0E-7 T 17-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BJD13_13215 4ada3ad75badd488fd0ff1666432cc07 515 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 27 505 2.8E-194 T 17-10-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 BJD13_13215 4ada3ad75badd488fd0ff1666432cc07 515 Pfam PF00437 Type II/IV secretion system protein 139 402 6.1E-84 T 17-10-2018 IPR001482 Type II/IV secretion system protein BJD13_13215 4ada3ad75badd488fd0ff1666432cc07 515 SMART SM00382 263 405 6.5E-7 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_13215 4ada3ad75badd488fd0ff1666432cc07 515 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 330 344 - T 17-10-2018 IPR001482 Type II/IV secretion system protein BJD13_13215 4ada3ad75badd488fd0ff1666432cc07 515 Gene3D G3DSA:3.40.50.300 236 513 1.8E-110 T 17-10-2018 BJD13_13215 4ada3ad75badd488fd0ff1666432cc07 515 Gene3D G3DSA:3.30.450.90 109 235 2.6E-44 T 17-10-2018 BJD13_13215 4ada3ad75badd488fd0ff1666432cc07 515 SUPERFAMILY SSF160246 27 89 6.54E-12 T 17-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily BJD13_13215 4ada3ad75badd488fd0ff1666432cc07 515 SUPERFAMILY SSF52540 113 505 1.8E-99 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_20535 829bf153b351fa373f350bfd1a857088 299 SUPERFAMILY SSF47240 1 285 3.98E-85 T 17-10-2018 IPR009078 Ferritin-like superfamily BJD13_20535 829bf153b351fa373f350bfd1a857088 299 Gene3D G3DSA:1.20.1260.10 1 198 2.5E-72 T 17-10-2018 IPR012347 Ferritin-like BJD13_20535 829bf153b351fa373f350bfd1a857088 299 Pfam PF05067 Manganese containing catalase 1 286 5.4E-84 T 17-10-2018 IPR007760 Manganese catalase BJD13_23880 6ef975e755a8b1d7e5e266963015ea5a 286 Pfam PF12083 Domain of unknown function (DUF3560) 21 142 1.4E-43 T 17-10-2018 IPR021944 Protein of unknown function DUF3560 BJD13_17750 8c91fa40055d0e88eaeea9c243ca251c 478 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 245 256 - T 17-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 BJD13_17750 8c91fa40055d0e88eaeea9c243ca251c 478 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 217 224 - T 17-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 BJD13_17750 8c91fa40055d0e88eaeea9c243ca251c 478 Gene3D G3DSA:3.40.309.10 221 424 2.2E-154 T 17-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 BJD13_17750 8c91fa40055d0e88eaeea9c243ca251c 478 Pfam PF00171 Aldehyde dehydrogenase family 10 443 1.9E-97 T 17-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 BJD13_17750 8c91fa40055d0e88eaeea9c243ca251c 478 SUPERFAMILY SSF53720 9 446 1.44E-119 T 17-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BJD13_17750 8c91fa40055d0e88eaeea9c243ca251c 478 Gene3D G3DSA:3.40.605.10 24 444 2.2E-154 T 17-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 BJD13_17750 8c91fa40055d0e88eaeea9c243ca251c 478 PIRSF PIRSF036492 3 478 7.6E-156 T 17-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 BJD13_09950 d1563b1073f690f137c139cadea4ee3a 227 SUPERFAMILY SSF52833 1 211 1.43E-46 T 17-10-2018 IPR036249 Thioredoxin-like superfamily BJD13_09950 d1563b1073f690f137c139cadea4ee3a 227 Pfam PF01323 DSBA-like thioredoxin domain 2 204 1.1E-39 T 17-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 BJD13_09950 d1563b1073f690f137c139cadea4ee3a 227 Gene3D G3DSA:3.40.30.10 1 207 3.4E-69 T 17-10-2018 BJD13_08175 6d1adf1727ff6c4d2ba8aab1f04fdc8b 145 SUPERFAMILY SSF51182 5 130 1.78E-35 T 17-10-2018 IPR011051 RmlC-like cupin domain superfamily BJD13_08175 6d1adf1727ff6c4d2ba8aab1f04fdc8b 145 Pfam PF05523 WxcM-like, C-terminal 3 132 1.1E-45 T 17-10-2018 IPR008894 WxcM-like, C-terminal KEGG: 00523+5.3.2.3|MetaCyc: PWY-6953|MetaCyc: PWY-7688 BJD13_08175 6d1adf1727ff6c4d2ba8aab1f04fdc8b 145 Gene3D G3DSA:2.60.120.10 1 139 3.4E-44 T 17-10-2018 IPR014710 RmlC-like jelly roll fold BJD13_04645 9d07963af1954241d5499e90555b4b7f 411 SUPERFAMILY SSF52402 18 199 1.94E-34 T 17-10-2018 BJD13_04645 9d07963af1954241d5499e90555b4b7f 411 Hamap MF_00005 Argininosuccinate synthase [argG]. 17 411 39.677 T 17-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BJD13_04645 9d07963af1954241d5499e90555b4b7f 411 Gene3D G3DSA:3.40.50.620 20 188 4.6E-105 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD13_04645 9d07963af1954241d5499e90555b4b7f 411 TIGRFAM TIGR00032 argG: argininosuccinate synthase 20 409 5.8E-81 T 17-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BJD13_04645 9d07963af1954241d5499e90555b4b7f 411 SUPERFAMILY SSF69864 189 410 1.44E-55 T 17-10-2018 BJD13_04645 9d07963af1954241d5499e90555b4b7f 411 Gene3D G3DSA:3.90.1260.10 79 366 4.6E-105 T 17-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BJD13_04645 9d07963af1954241d5499e90555b4b7f 411 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 23 31 - T 17-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BJD13_04645 9d07963af1954241d5499e90555b4b7f 411 Pfam PF00764 Arginosuccinate synthase 21 406 6.3E-83 T 17-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BJD13_04645 9d07963af1954241d5499e90555b4b7f 411 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 131 142 - T 17-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BJD13_02870 d2433d50e9abb099246ce21e59e89c70 416 SUPERFAMILY SSF54373 270 357 8.11E-14 T 17-10-2018 BJD13_02870 d2433d50e9abb099246ce21e59e89c70 416 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 7.5E-5 T 17-10-2018 BJD13_02870 d2433d50e9abb099246ce21e59e89c70 416 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 410 416 7.5E-5 T 17-10-2018 BJD13_02870 d2433d50e9abb099246ce21e59e89c70 416 SUPERFAMILY SSF51905 7 415 1.75E-54 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_02870 d2433d50e9abb099246ce21e59e89c70 416 Gene3D G3DSA:3.30.9.10 138 357 2.4E-62 T 17-10-2018 BJD13_02870 d2433d50e9abb099246ce21e59e89c70 416 Gene3D G3DSA:3.50.50.60 108 398 2.4E-62 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_02870 d2433d50e9abb099246ce21e59e89c70 416 Pfam PF01266 FAD dependent oxidoreductase 7 397 1.0E-66 T 17-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 BJD13_02870 d2433d50e9abb099246ce21e59e89c70 416 Gene3D G3DSA:3.50.50.60 2 71 7.1E-10 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_14040 54ea2dd41f0c831024c3defcee595945 289 Hamap MF_01883 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [mdcB]. 1 289 113.441 T 17-10-2018 IPR017555 Triphosphoribosyl-dephospho-CoA synthase GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 BJD13_14040 54ea2dd41f0c831024c3defcee595945 289 TIGRFAM TIGR03132 malonate_mdcB: triphosphoribosyl-dephospho-CoA synthase MdcB 21 286 4.1E-104 T 17-10-2018 IPR017555 Triphosphoribosyl-dephospho-CoA synthase GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 BJD13_14040 54ea2dd41f0c831024c3defcee595945 289 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 25 284 1.7E-75 T 17-10-2018 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 BJD13_18925 e1d4b5d25e57a32909d9b42792e44f9d 334 Gene3D G3DSA:3.20.20.70 11 250 4.0E-74 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD13_18925 e1d4b5d25e57a32909d9b42792e44f9d 334 PIRSF PIRSF006621 4 327 6.5E-79 T 17-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 BJD13_18925 e1d4b5d25e57a32909d9b42792e44f9d 334 SUPERFAMILY SSF51395 13 324 1.19E-73 T 17-10-2018 BJD13_18925 e1d4b5d25e57a32909d9b42792e44f9d 334 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 13 324 3.2E-121 T 17-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 BJD13_18925 e1d4b5d25e57a32909d9b42792e44f9d 334 Gene3D G3DSA:1.20.120.1460 251 329 4.4E-18 T 17-10-2018 BJD13_18925 e1d4b5d25e57a32909d9b42792e44f9d 334 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 95 113 - T 17-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 BJD13_18925 e1d4b5d25e57a32909d9b42792e44f9d 334 Pfam PF01207 Dihydrouridine synthase (Dus) 16 317 1.7E-78 T 17-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 BJD13_18925 e1d4b5d25e57a32909d9b42792e44f9d 334 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 8 327 48.877 T 17-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 BJD13_08530 535eab152e8165c8ee774a306435de28 237 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 166 3.3E-12 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_08530 535eab152e8165c8ee774a306435de28 237 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 182 3.3E-12 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_08530 535eab152e8165c8ee774a306435de28 237 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 194 3.3E-12 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_08530 535eab152e8165c8ee774a306435de28 237 Pfam PF00072 Response regulator receiver domain 14 117 2.5E-16 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_08530 535eab152e8165c8ee774a306435de28 237 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 206 2.6E-17 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_08530 535eab152e8165c8ee774a306435de28 237 SMART SM00448 4 117 3.5E-10 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_08530 535eab152e8165c8ee774a306435de28 237 SMART SM00421 149 206 9.7E-17 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_08530 535eab152e8165c8ee774a306435de28 237 SUPERFAMILY SSF52172 3 133 1.71E-22 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_08530 535eab152e8165c8ee774a306435de28 237 SUPERFAMILY SSF46894 139 211 6.46E-21 T 17-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BJD13_08530 535eab152e8165c8ee774a306435de28 237 Gene3D G3DSA:3.40.50.12740 5 212 2.0E-49 T 17-10-2018 BJD13_17990 f9d607b1e1da60e6674d754614bbc83d 576 SUPERFAMILY SSF50998 462 566 6.28E-18 T 17-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily BJD13_17990 f9d607b1e1da60e6674d754614bbc83d 576 Gene3D G3DSA:2.140.10.10 60 459 6.2E-61 T 17-10-2018 BJD13_17990 f9d607b1e1da60e6674d754614bbc83d 576 Gene3D G3DSA:2.140.10.10 460 570 8.8E-14 T 17-10-2018 BJD13_17990 f9d607b1e1da60e6674d754614bbc83d 576 SMART SM00564 158 190 4.5E-4 T 17-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BJD13_17990 f9d607b1e1da60e6674d754614bbc83d 576 SMART SM00564 429 479 38.0 T 17-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BJD13_17990 f9d607b1e1da60e6674d754614bbc83d 576 SMART SM00564 110 142 7.9E-4 T 17-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BJD13_17990 f9d607b1e1da60e6674d754614bbc83d 576 SMART SM00564 378 414 300.0 T 17-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BJD13_17990 f9d607b1e1da60e6674d754614bbc83d 576 SMART SM00564 497 529 6.0E-5 T 17-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BJD13_17990 f9d607b1e1da60e6674d754614bbc83d 576 SMART SM00564 203 249 0.002 T 17-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BJD13_17990 f9d607b1e1da60e6674d754614bbc83d 576 Pfam PF13360 PQQ-like domain 48 217 5.8E-19 T 17-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat BJD13_17990 f9d607b1e1da60e6674d754614bbc83d 576 Pfam PF13360 PQQ-like domain 232 563 1.1E-14 T 17-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat BJD13_17990 f9d607b1e1da60e6674d754614bbc83d 576 SUPERFAMILY SSF50998 63 494 4.45E-68 T 17-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily BJD13_17100 b257f59ce526f35973181321b466e7ba 471 Gene3D G3DSA:1.20.1740.10 22 470 1.3E-110 T 17-10-2018 BJD13_17100 b257f59ce526f35973181321b466e7ba 471 PIRSF PIRSF006060 6 468 1.3E-85 T 17-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BJD13_17100 b257f59ce526f35973181321b466e7ba 471 Pfam PF13520 Amino acid permease 26 435 4.0E-54 T 17-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BJD13_20745 f900eb48be379bb6a9a44151460de372 445 Gene3D G3DSA:2.120.10.30 172 443 1.2E-16 T 17-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like BJD13_20745 f900eb48be379bb6a9a44151460de372 445 SUPERFAMILY SSF50952 68 443 6.15E-34 T 17-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 BJD13_20745 f900eb48be379bb6a9a44151460de372 445 Pfam PF07995 Glucose / Sorbosone dehydrogenase 190 369 3.8E-12 T 17-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase BJD13_07600 f36623b16ed4d3d38b28568594c7d6ac 618 Pfam PF00990 Diguanylate cyclase, GGDEF domain 175 307 2.5E-11 T 17-10-2018 IPR000160 GGDEF domain BJD13_07600 f36623b16ed4d3d38b28568594c7d6ac 618 SUPERFAMILY SSF141868 359 598 1.7E-82 T 17-10-2018 IPR035919 EAL domain superfamily BJD13_07600 f36623b16ed4d3d38b28568594c7d6ac 618 SMART SM00052 343 589 1.4E-104 T 17-10-2018 IPR001633 EAL domain BJD13_07600 f36623b16ed4d3d38b28568594c7d6ac 618 Gene3D G3DSA:3.20.20.450 347 605 3.1E-91 T 17-10-2018 IPR035919 EAL domain superfamily BJD13_07600 f36623b16ed4d3d38b28568594c7d6ac 618 Gene3D G3DSA:3.30.70.270 176 346 2.6E-39 T 17-10-2018 BJD13_07600 f36623b16ed4d3d38b28568594c7d6ac 618 Pfam PF01590 GAF domain 37 152 4.0E-10 T 17-10-2018 IPR003018 GAF domain GO:0005515 BJD13_07600 f36623b16ed4d3d38b28568594c7d6ac 618 Gene3D G3DSA:3.30.450.40 30 174 2.1E-17 T 17-10-2018 IPR029016 GAF-like domain superfamily BJD13_07600 f36623b16ed4d3d38b28568594c7d6ac 618 Pfam PF00563 EAL domain 350 584 1.6E-71 T 17-10-2018 IPR001633 EAL domain BJD13_07600 f36623b16ed4d3d38b28568594c7d6ac 618 SMART SM00267 163 333 7.4E-5 T 17-10-2018 IPR000160 GGDEF domain BJD13_07600 f36623b16ed4d3d38b28568594c7d6ac 618 SUPERFAMILY SSF55781 35 172 6.67E-25 T 17-10-2018 BJD13_07600 f36623b16ed4d3d38b28568594c7d6ac 618 SUPERFAMILY SSF55073 180 311 9.42E-10 T 17-10-2018 IPR029787 Nucleotide cyclase BJD13_07600 f36623b16ed4d3d38b28568594c7d6ac 618 SMART SM00065 34 177 1.4E-5 T 17-10-2018 IPR003018 GAF domain GO:0005515 BJD13_13160 1a2752b765a871daa6b7f59819902db7 425 Gene3D G3DSA:1.20.1250.20 8 227 3.6E-45 T 17-10-2018 BJD13_13160 1a2752b765a871daa6b7f59819902db7 425 TIGRFAM TIGR01272 gluP: glucose/galactose transporter WARNING 93 411 4.5E-126 T 17-10-2018 IPR005964 Bacterial glucose/galactose transporter GO:0005354|GO:0005355|GO:0015757|GO:0016021|GO:1904659 BJD13_13160 1a2752b765a871daa6b7f59819902db7 425 SUPERFAMILY SSF103473 11 414 7.19E-31 T 17-10-2018 IPR036259 MFS transporter superfamily BJD13_13160 1a2752b765a871daa6b7f59819902db7 425 Gene3D G3DSA:1.20.1250.20 233 418 1.2E-41 T 17-10-2018 BJD13_13160 1a2752b765a871daa6b7f59819902db7 425 Pfam PF07690 Major Facilitator Superfamily 18 376 1.1E-13 T 17-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD13_11320 f46333fbd3287175d5b4370eb5685227 231 Gene3D G3DSA:3.30.70.1230 43 219 2.5E-17 T 17-10-2018 IPR029787 Nucleotide cyclase BJD13_11320 f46333fbd3287175d5b4370eb5685227 231 SUPERFAMILY SSF55073 43 197 1.88E-20 T 17-10-2018 IPR029787 Nucleotide cyclase BJD13_18470 9eb74d226074252f4b8857b46578db7b 1233 Pfam PF00069 Protein kinase domain 188 405 1.6E-35 T 17-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 BJD13_18470 9eb74d226074252f4b8857b46578db7b 1233 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 194 223 - T 17-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 BJD13_18470 9eb74d226074252f4b8857b46578db7b 1233 SUPERFAMILY SSF56436 1061 1232 1.06E-25 T 17-10-2018 IPR016187 C-type lectin fold BJD13_18470 9eb74d226074252f4b8857b46578db7b 1233 Pfam PF03781 Sulfatase-modifying factor enzyme 1 1061 1230 3.0E-16 T 17-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 BJD13_18470 9eb74d226074252f4b8857b46578db7b 1233 Gene3D G3DSA:3.90.1580.10 1057 1231 4.0E-21 T 17-10-2018 BJD13_18470 9eb74d226074252f4b8857b46578db7b 1233 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 315 327 - T 17-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 BJD13_18470 9eb74d226074252f4b8857b46578db7b 1233 SUPERFAMILY SSF56112 185 459 1.62E-56 T 17-10-2018 IPR011009 Protein kinase-like domain superfamily BJD13_18470 9eb74d226074252f4b8857b46578db7b 1233 Gene3D G3DSA:1.10.510.10 275 462 4.5E-32 T 17-10-2018 BJD13_18470 9eb74d226074252f4b8857b46578db7b 1233 Gene3D G3DSA:3.30.200.20 177 273 3.1E-24 T 17-10-2018 BJD13_08270 effd87fff966d3719c02e65af0c3c36e 114 SMART SM00448 1 110 5.5E-17 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_08270 effd87fff966d3719c02e65af0c3c36e 114 Gene3D G3DSA:3.40.50.2300 1 114 3.4E-27 T 17-10-2018 BJD13_08270 effd87fff966d3719c02e65af0c3c36e 114 SUPERFAMILY SSF52172 1 114 7.54E-28 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_08270 effd87fff966d3719c02e65af0c3c36e 114 Pfam PF00072 Response regulator receiver domain 1 110 8.2E-20 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_15070 06367b4ae09077355e9c73d616831e00 286 ProSitePatterns PS01245 RIO1/ZK632.3/MJ0444 family signature. 164 175 - T 17-10-2018 IPR018935 RIO kinase, conserved site GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1|Reactome: R-HSA-6791226 BJD13_15070 06367b4ae09077355e9c73d616831e00 286 Gene3D G3DSA:1.10.510.10 138 221 1.2E-17 T 17-10-2018 BJD13_15070 06367b4ae09077355e9c73d616831e00 286 SMART SM00090 2 235 1.5E-9 T 17-10-2018 IPR000687 RIO kinase GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1|Reactome: R-HSA-6791226 BJD13_15070 06367b4ae09077355e9c73d616831e00 286 SUPERFAMILY SSF56112 18 205 1.02E-18 T 17-10-2018 IPR011009 Protein kinase-like domain superfamily BJD13_15070 06367b4ae09077355e9c73d616831e00 286 Pfam PF01163 RIO1 family 31 221 1.9E-35 T 17-10-2018 BJD13_18985 bb385974875e127cf3bcf95ee3f0a7f2 128 Gene3D G3DSA:3.30.70.1070 8 90 2.7E-6 T 17-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 BJD13_18985 bb385974875e127cf3bcf95ee3f0a7f2 128 Pfam PF05036 Sporulation related domain 19 88 6.2E-9 T 17-10-2018 IPR007730 Sporulation-like domain GO:0042834 BJD13_11070 9c81d67a415b327f7a8f8b6e8f973b57 357 Gene3D G3DSA:3.30.160.60 313 348 3.5E-11 T 17-10-2018 BJD13_11070 9c81d67a415b327f7a8f8b6e8f973b57 357 Pfam PF02618 YceG-like family 51 339 1.8E-75 T 17-10-2018 IPR003770 Endolytic murein transglycosylase BJD13_11070 9c81d67a415b327f7a8f8b6e8f973b57 357 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 21 345 32.436 T 17-10-2018 IPR003770 Endolytic murein transglycosylase BJD13_11070 9c81d67a415b327f7a8f8b6e8f973b57 357 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 19 344 9.2E-78 T 17-10-2018 IPR003770 Endolytic murein transglycosylase BJD13_10425 a5024816d5e6fbf6f2fbcc4fd00da177 301 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 16 287 9.1E-91 T 17-10-2018 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 BJD13_10425 a5024816d5e6fbf6f2fbcc4fd00da177 301 Gene3D G3DSA:3.10.129.90 7 289 4.4E-104 T 17-10-2018 BJD13_10425 a5024816d5e6fbf6f2fbcc4fd00da177 301 SUPERFAMILY SSF54637 120 287 2.54E-55 T 17-10-2018 IPR029069 HotDog domain superfamily BJD13_10425 a5024816d5e6fbf6f2fbcc4fd00da177 301 SUPERFAMILY SSF54637 8 118 2.37E-39 T 17-10-2018 IPR029069 HotDog domain superfamily BJD13_10425 a5024816d5e6fbf6f2fbcc4fd00da177 301 Pfam PF13622 Thioesterase-like superfamily 31 286 3.3E-61 T 17-10-2018 BJD13_09915 25686822eb4d812213d868087c5a15ec 423 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 282 297 8.4E-16 T 17-10-2018 BJD13_09915 25686822eb4d812213d868087c5a15ec 423 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 8.4E-16 T 17-10-2018 BJD13_09915 25686822eb4d812213d868087c5a15ec 423 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 147 162 8.4E-16 T 17-10-2018 BJD13_09915 25686822eb4d812213d868087c5a15ec 423 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 313 8.4E-16 T 17-10-2018 BJD13_09915 25686822eb4d812213d868087c5a15ec 423 Pfam PF01494 FAD binding domain 7 339 3.4E-25 T 17-10-2018 IPR002938 FAD-binding domain GO:0071949 BJD13_09915 25686822eb4d812213d868087c5a15ec 423 Gene3D G3DSA:3.30.9.50 42 272 1.9E-54 T 17-10-2018 BJD13_09915 25686822eb4d812213d868087c5a15ec 423 SUPERFAMILY SSF51905 6 377 2.79E-50 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_09915 25686822eb4d812213d868087c5a15ec 423 Gene3D G3DSA:3.50.50.60 9 339 1.9E-54 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_16215 713d33b260929698a74aa45cd51949c5 370 Pfam PF07883 Cupin domain 301 365 4.2E-15 T 17-10-2018 IPR013096 Cupin 2, conserved barrel BJD13_16215 713d33b260929698a74aa45cd51949c5 370 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 26 213 1.9E-17 T 17-10-2018 IPR013830 SGNH hydrolase-type esterase domain BJD13_16215 713d33b260929698a74aa45cd51949c5 370 SUPERFAMILY SSF51182 235 368 1.35E-20 T 17-10-2018 IPR011051 RmlC-like cupin domain superfamily BJD13_16215 713d33b260929698a74aa45cd51949c5 370 SUPERFAMILY SSF52266 22 234 9.49E-54 T 17-10-2018 BJD13_16215 713d33b260929698a74aa45cd51949c5 370 Gene3D G3DSA:3.40.50.1110 21 242 8.4E-67 T 17-10-2018 IPR036514 SGNH hydrolase superfamily BJD13_16215 713d33b260929698a74aa45cd51949c5 370 Gene3D G3DSA:2.60.120.10 248 368 1.0E-18 T 17-10-2018 IPR014710 RmlC-like jelly roll fold BJD13_01875 c922cec25500c0559212f0f590f65ef9 90 Pfam PF04226 Transglycosylase associated protein 40 86 8.0E-11 T 17-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 BJD13_15030 7ac62d7839bc16b0cde36ffb09cf388b 139 Gene3D G3DSA:3.10.450.50 1 139 1.7E-40 T 17-10-2018 BJD13_15030 7ac62d7839bc16b0cde36ffb09cf388b 139 SUPERFAMILY SSF54427 5 133 2.8E-28 T 17-10-2018 IPR032710 NTF2-like domain superfamily BJD13_15030 7ac62d7839bc16b0cde36ffb09cf388b 139 Pfam PF12680 SnoaL-like domain 13 123 8.9E-17 T 17-10-2018 IPR037401 SnoaL-like domain BJD13_15030 7ac62d7839bc16b0cde36ffb09cf388b 139 TIGRFAM TIGR02096 TIGR02096: conserved hypothetical protein 12 138 2.8E-43 T 17-10-2018 IPR011721 Conserved hypothetical protein CHP02096 BJD13_09920 4a7f470e18c75cc7b5b654b4af364fa7 68 SMART SM00357 3 67 8.4E-31 T 17-10-2018 IPR011129 Cold shock domain GO:0003676 BJD13_09920 4a7f470e18c75cc7b5b654b4af364fa7 68 Gene3D G3DSA:2.40.50.140 2 65 4.2E-30 T 17-10-2018 BJD13_09920 4a7f470e18c75cc7b5b654b4af364fa7 68 PRINTS PR00050 Cold shock protein signature 4 19 1.1E-17 T 17-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BJD13_09920 4a7f470e18c75cc7b5b654b4af364fa7 68 PRINTS PR00050 Cold shock protein signature 25 34 1.1E-17 T 17-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BJD13_09920 4a7f470e18c75cc7b5b654b4af364fa7 68 PRINTS PR00050 Cold shock protein signature 40 58 1.1E-17 T 17-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BJD13_09920 4a7f470e18c75cc7b5b654b4af364fa7 68 PIRSF PIRSF002599 1 68 7.5E-25 T 17-10-2018 IPR012156 Cold shock, CspA GO:0003676 BJD13_09920 4a7f470e18c75cc7b5b654b4af364fa7 68 SUPERFAMILY SSF50249 1 67 3.86E-25 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD13_09920 4a7f470e18c75cc7b5b654b4af364fa7 68 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 2.5E-31 T 17-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BJD13_09920 4a7f470e18c75cc7b5b654b4af364fa7 68 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 17-10-2018 IPR019844 Cold-shock conserved site BJD13_06950 31ecbd2395e38bad417c1e931b2f36ee 136 SUPERFAMILY SSF88723 1 128 4.77E-13 T 17-10-2018 IPR029060 PIN-like domain superfamily BJD13_06950 31ecbd2395e38bad417c1e931b2f36ee 136 Gene3D G3DSA:3.40.50.1010 3 133 6.1E-11 T 17-10-2018 BJD13_06950 31ecbd2395e38bad417c1e931b2f36ee 136 Pfam PF01850 PIN domain 3 121 1.3E-7 T 17-10-2018 IPR002716 PIN domain BJD13_16915 7c507f99b50b846220c51813b529f647 486 SMART SM00155 400 427 2.2E-4 T 17-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 BJD13_16915 7c507f99b50b846220c51813b529f647 486 SMART SM00155 219 246 0.054 T 17-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 BJD13_16915 7c507f99b50b846220c51813b529f647 486 Gene3D G3DSA:3.30.870.10 111 301 1.6E-43 T 17-10-2018 BJD13_16915 7c507f99b50b846220c51813b529f647 486 SUPERFAMILY SSF56024 74 317 6.54E-47 T 17-10-2018 BJD13_16915 7c507f99b50b846220c51813b529f647 486 Pfam PF13091 PLD-like domain 328 448 2.5E-25 T 17-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 BJD13_16915 7c507f99b50b846220c51813b529f647 486 Pfam PF13091 PLD-like domain 134 247 8.8E-16 T 17-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 BJD13_16915 7c507f99b50b846220c51813b529f647 486 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 19 486 8.4E-117 T 17-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 BJD13_16915 7c507f99b50b846220c51813b529f647 486 Gene3D G3DSA:3.30.870.10 302 485 4.3E-28 T 17-10-2018 BJD13_16915 7c507f99b50b846220c51813b529f647 486 SUPERFAMILY SSF56024 270 463 8.07E-44 T 17-10-2018 BJD13_22195 880956d77292e1a4ea203564d75d950d 126 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 124 1.1E-49 T 17-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 BJD13_22195 880956d77292e1a4ea203564d75d950d 126 Gene3D G3DSA:3.30.1330.40 1 126 3.3E-52 T 17-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 BJD13_22195 880956d77292e1a4ea203564d75d950d 126 Pfam PF01042 Endoribonuclease L-PSP 8 124 8.2E-41 T 17-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 BJD13_22195 880956d77292e1a4ea203564d75d950d 126 SUPERFAMILY SSF55298 2 125 2.04E-45 T 17-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 BJD13_02405 0122289a5b833d390e4a74f251456138 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.1E-8 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_02405 0122289a5b833d390e4a74f251456138 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.1E-8 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_02405 0122289a5b833d390e4a74f251456138 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.1E-8 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_02405 0122289a5b833d390e4a74f251456138 299 Gene3D G3DSA:3.40.190.10 94 293 1.1E-51 T 17-10-2018 BJD13_02405 0122289a5b833d390e4a74f251456138 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 5.7E-22 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_02405 0122289a5b833d390e4a74f251456138 299 SUPERFAMILY SSF53850 90 295 9.59E-41 T 17-10-2018 BJD13_02405 0122289a5b833d390e4a74f251456138 299 SUPERFAMILY SSF46785 5 90 9.33E-24 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_02405 0122289a5b833d390e4a74f251456138 299 Pfam PF03466 LysR substrate binding domain 90 295 9.3E-38 T 17-10-2018 IPR005119 LysR, substrate-binding BJD13_02405 0122289a5b833d390e4a74f251456138 299 Gene3D G3DSA:3.40.190.10 166 268 1.1E-51 T 17-10-2018 BJD13_02405 0122289a5b833d390e4a74f251456138 299 Gene3D G3DSA:1.10.10.10 4 92 1.8E-27 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_05800 d6c2d8c5cecbc3e60f9d34f870a588df 1025 Gene3D G3DSA:2.130.10.10 45 182 1.4E-15 T 17-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BJD13_05800 d6c2d8c5cecbc3e60f9d34f870a588df 1025 SUPERFAMILY SSF63829 357 639 1.7E-11 T 17-10-2018 BJD13_05800 d6c2d8c5cecbc3e60f9d34f870a588df 1025 SUPERFAMILY SSF55874 878 998 3.54E-14 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_05800 d6c2d8c5cecbc3e60f9d34f870a588df 1025 Pfam PF07730 Histidine kinase 806 870 1.1E-9 T 17-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 BJD13_05800 d6c2d8c5cecbc3e60f9d34f870a588df 1025 Gene3D G3DSA:2.130.10.10 206 348 3.8E-5 T 17-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BJD13_05800 d6c2d8c5cecbc3e60f9d34f870a588df 1025 Gene3D G3DSA:2.130.10.10 356 646 3.0E-29 T 17-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BJD13_05800 d6c2d8c5cecbc3e60f9d34f870a588df 1025 Gene3D G3DSA:2.60.40.10 650 770 1.3E-23 T 17-10-2018 IPR013783 Immunoglobulin-like fold BJD13_05800 d6c2d8c5cecbc3e60f9d34f870a588df 1025 Gene3D G3DSA:3.30.565.10 874 999 5.8E-23 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_05800 d6c2d8c5cecbc3e60f9d34f870a588df 1025 SUPERFAMILY SSF63829 43 337 1.8E-9 T 17-10-2018 BJD13_05800 d6c2d8c5cecbc3e60f9d34f870a588df 1025 Pfam PF07495 Y_Y_Y domain 697 759 1.5E-12 T 17-10-2018 IPR011123 Two component regulator three Y BJD13_09355 81efdf11c980e3bcfaad003c16a0c7b6 146 ProSitePatterns PS01117 MarR-type HTH domain signature. 69 103 - T 17-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site BJD13_09355 81efdf11c980e3bcfaad003c16a0c7b6 146 Pfam PF01047 MarR family 41 94 1.6E-11 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD13_09355 81efdf11c980e3bcfaad003c16a0c7b6 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 120 140 8.2E-11 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD13_09355 81efdf11c980e3bcfaad003c16a0c7b6 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 90 106 8.2E-11 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD13_09355 81efdf11c980e3bcfaad003c16a0c7b6 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 71 86 8.2E-11 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD13_09355 81efdf11c980e3bcfaad003c16a0c7b6 146 SMART SM00347 29 130 5.0E-16 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD13_09355 81efdf11c980e3bcfaad003c16a0c7b6 146 SUPERFAMILY SSF46785 10 145 1.38E-27 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_09355 81efdf11c980e3bcfaad003c16a0c7b6 146 Gene3D G3DSA:1.10.10.10 1 146 2.1E-27 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_04370 08fc68f5ddba5bc832cfe71ac259621b 355 Pfam PF08331 Domain of unknown function (DUF1730) 65 144 5.9E-23 T 17-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 BJD13_04370 08fc68f5ddba5bc832cfe71ac259621b 355 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 197 208 - T 17-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BJD13_04370 08fc68f5ddba5bc832cfe71ac259621b 355 SUPERFAMILY SSF54862 174 324 3.43E-18 T 17-10-2018 BJD13_04370 08fc68f5ddba5bc832cfe71ac259621b 355 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 10 319 49.696 T 17-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 BJD13_04370 08fc68f5ddba5bc832cfe71ac259621b 355 Pfam PF13484 4Fe-4S double cluster binding domain 196 260 2.8E-19 T 17-10-2018 BJD13_04370 08fc68f5ddba5bc832cfe71ac259621b 355 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 17 353 7.6E-150 T 17-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 BJD13_06785 c03513924af829df2a1708069d06122e 324 Pfam PF00691 OmpA family 167 265 5.3E-17 T 17-10-2018 IPR006665 OmpA-like domain BJD13_06785 c03513924af829df2a1708069d06122e 324 Gene3D G3DSA:3.30.1330.60 114 277 4.3E-45 T 17-10-2018 IPR036737 OmpA-like domain superfamily BJD13_06785 c03513924af829df2a1708069d06122e 324 SUPERFAMILY SSF103088 142 271 1.27E-30 T 17-10-2018 IPR036737 OmpA-like domain superfamily BJD13_06785 c03513924af829df2a1708069d06122e 324 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 4 57 1.8E-22 T 17-10-2018 IPR025713 Motility protein B, N-terminal domain BJD13_20215 9bd459af5c18aa0483fa268212022b4e 239 Pfam PF05944 Phage small terminase subunit 39 167 1.4E-48 T 17-10-2018 IPR010270 Bacteriophage P2, GpM GO:0003677|GO:0004519|GO:0019069 BJD13_03115 0960db15145f0d2b10f525ecb400c2c6 251 ProSitePatterns PS00171 Triosephosphate isomerase active site. 164 174 - T 17-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD13_03115 0960db15145f0d2b10f525ecb400c2c6 251 Pfam PF00121 Triosephosphate isomerase 4 244 4.3E-88 T 17-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD13_03115 0960db15145f0d2b10f525ecb400c2c6 251 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 247 61.205 T 17-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD13_03115 0960db15145f0d2b10f525ecb400c2c6 251 Gene3D G3DSA:3.20.20.70 1 251 2.4E-93 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD13_03115 0960db15145f0d2b10f525ecb400c2c6 251 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 239 2.5E-65 T 17-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD13_03115 0960db15145f0d2b10f525ecb400c2c6 251 SUPERFAMILY SSF51351 1 247 7.2E-88 T 17-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BJD13_12240 ea28739e6719f4eae793779e0cbc3487 187 Gene3D G3DSA:3.40.30.10 1 186 3.0E-58 T 17-10-2018 BJD13_12240 ea28739e6719f4eae793779e0cbc3487 187 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 187 9.1E-96 T 17-10-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 BJD13_12240 ea28739e6719f4eae793779e0cbc3487 187 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 181 3.9E-5 T 17-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 BJD13_12240 ea28739e6719f4eae793779e0cbc3487 187 PIRSF PIRSF000239 1 187 7.5E-46 T 17-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 BJD13_12240 ea28739e6719f4eae793779e0cbc3487 187 SUPERFAMILY SSF52833 1 186 1.59E-51 T 17-10-2018 IPR036249 Thioredoxin-like superfamily BJD13_12240 ea28739e6719f4eae793779e0cbc3487 187 Pfam PF00578 AhpC/TSA family 4 132 2.5E-30 T 17-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 BJD13_08810 fae8ade903569cd81e5b072309bf41e9 24 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 1 19 3.9E-4 T 17-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 BJD13_08810 fae8ade903569cd81e5b072309bf41e9 24 Gene3D G3DSA:1.20.140.10 1 24 3.0E-5 T 17-10-2018 BJD13_08805 fae8ade903569cd81e5b072309bf41e9 24 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 1 19 3.9E-4 T 17-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 BJD13_08805 fae8ade903569cd81e5b072309bf41e9 24 Gene3D G3DSA:1.20.140.10 1 24 3.0E-5 T 17-10-2018 BJD13_07800 0bfd3501e96221d5ff4cebe48a7b6936 116 SUPERFAMILY SSF89946 22 110 6.67E-6 T 17-10-2018 IPR036701 RraB-like superfamily BJD13_07800 0bfd3501e96221d5ff4cebe48a7b6936 116 Pfam PF06877 Regulator of ribonuclease activity B 9 113 1.1E-19 T 17-10-2018 IPR009671 Regulator of ribonuclease activity B domain BJD13_21785 261634de3eec9bed0f925386f69a7dff 390 SUPERFAMILY SSF56935 108 387 3.36E-11 T 17-10-2018 BJD13_21785 261634de3eec9bed0f925386f69a7dff 390 Pfam PF07396 Phosphate-selective porin O and P 42 390 1.6E-96 T 17-10-2018 IPR010870 Phosphate-selective porin O/P BJD13_21785 261634de3eec9bed0f925386f69a7dff 390 Gene3D G3DSA:2.40.160.10 24 390 3.9E-71 T 17-10-2018 IPR023614 Porin domain superfamily BJD13_23010 98fa05d9f180e9440b63bde8179edc93 397 PRINTS PR00359 B-class P450 signature 289 316 1.5E-37 T 17-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BJD13_23010 98fa05d9f180e9440b63bde8179edc93 397 PRINTS PR00359 B-class P450 signature 338 347 1.5E-37 T 17-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BJD13_23010 98fa05d9f180e9440b63bde8179edc93 397 PRINTS PR00359 B-class P450 signature 347 358 1.5E-37 T 17-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BJD13_23010 98fa05d9f180e9440b63bde8179edc93 397 PRINTS PR00359 B-class P450 signature 85 96 1.5E-37 T 17-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BJD13_23010 98fa05d9f180e9440b63bde8179edc93 397 PRINTS PR00359 B-class P450 signature 272 283 1.5E-37 T 17-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BJD13_23010 98fa05d9f180e9440b63bde8179edc93 397 PRINTS PR00359 B-class P450 signature 131 147 1.5E-37 T 17-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BJD13_23010 98fa05d9f180e9440b63bde8179edc93 397 PRINTS PR00359 B-class P450 signature 191 213 1.5E-37 T 17-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BJD13_23010 98fa05d9f180e9440b63bde8179edc93 397 PRINTS PR00359 B-class P450 signature 317 332 1.5E-37 T 17-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BJD13_23010 98fa05d9f180e9440b63bde8179edc93 397 SUPERFAMILY SSF48264 9 397 3.93E-83 T 17-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 BJD13_23010 98fa05d9f180e9440b63bde8179edc93 397 Gene3D G3DSA:1.10.630.10 1 397 3.2E-113 T 17-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 BJD13_23010 98fa05d9f180e9440b63bde8179edc93 397 Pfam PF00067 Cytochrome P450 81 367 9.1E-23 T 17-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 BJD13_20695 4021356842273853f184355eb82955b6 154 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 16 136 5.2E-45 T 17-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 BJD13_20695 4021356842273853f184355eb82955b6 154 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 10 136 35.334 T 17-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 BJD13_20695 4021356842273853f184355eb82955b6 154 SUPERFAMILY SSF51316 15 138 1.71E-52 T 17-10-2018 IPR011057 Mss4-like superfamily BJD13_20695 4021356842273853f184355eb82955b6 154 Pfam PF01641 SelR domain 20 134 1.5E-46 T 17-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 BJD13_20695 4021356842273853f184355eb82955b6 154 Gene3D G3DSA:2.170.150.20 10 154 1.5E-60 T 17-10-2018 BJD13_16845 b033c481fba5b6f3aa390cb611fc48bb 377 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 57 314 2.9E-53 T 17-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 BJD13_16845 b033c481fba5b6f3aa390cb611fc48bb 377 SUPERFAMILY SSF51445 34 333 1.69E-81 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily BJD13_16845 b033c481fba5b6f3aa390cb611fc48bb 377 Gene3D G3DSA:3.20.20.80 34 350 7.2E-100 T 17-10-2018 BJD13_16845 b033c481fba5b6f3aa390cb611fc48bb 377 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 159 168 - T 17-10-2018 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 BJD13_19945 7a0c9588e32daf322fe0a4472bbe2d6a 425 Pfam PF04932 O-Antigen ligase 190 344 3.7E-16 T 17-10-2018 IPR007016 O-antigen ligase-related BJD13_14560 d17e60982692d30998735a38340ab712 300 Gene3D G3DSA:3.40.50.720 16 100 2.6E-7 T 17-10-2018 BJD13_14560 d17e60982692d30998735a38340ab712 300 SUPERFAMILY SSF51735 16 286 1.56E-32 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_14560 d17e60982692d30998735a38340ab712 300 Gene3D G3DSA:3.40.50.720 101 295 1.6E-21 T 17-10-2018 BJD13_14560 d17e60982692d30998735a38340ab712 300 Pfam PF01370 NAD dependent epimerase/dehydratase family 126 211 1.6E-6 T 17-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 BJD13_11915 5cd53facd3158786c0bd92327dd92306 201 SUPERFAMILY SSF52166 10 200 1.57E-61 T 17-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 BJD13_11915 5cd53facd3158786c0bd92327dd92306 201 Pfam PF00573 Ribosomal protein L4/L1 family 12 198 7.4E-55 T 17-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 BJD13_11915 5cd53facd3158786c0bd92327dd92306 201 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 8 201 29.337 T 17-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_11915 5cd53facd3158786c0bd92327dd92306 201 Gene3D G3DSA:3.40.1370.10 6 201 1.3E-59 T 17-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 BJD13_11915 5cd53facd3158786c0bd92327dd92306 201 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 12 198 2.8E-64 T 17-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_20280 e3960033c6107905e9e710305bddf7fa 258 Hamap MF_01974 Methionine aminopeptidase [map]. 1 248 35.928 T 17-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 BJD13_20280 e3960033c6107905e9e710305bddf7fa 258 Pfam PF00557 Metallopeptidase family M24 10 238 9.3E-47 T 17-10-2018 IPR000994 Peptidase M24 BJD13_20280 e3960033c6107905e9e710305bddf7fa 258 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 2 247 1.6E-82 T 17-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 BJD13_20280 e3960033c6107905e9e710305bddf7fa 258 PRINTS PR00599 Methionine aminopeptidase-1 signature 66 79 3.4E-18 T 17-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 BJD13_20280 e3960033c6107905e9e710305bddf7fa 258 PRINTS PR00599 Methionine aminopeptidase-1 signature 89 105 3.4E-18 T 17-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 BJD13_20280 e3960033c6107905e9e710305bddf7fa 258 PRINTS PR00599 Methionine aminopeptidase-1 signature 190 202 3.4E-18 T 17-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 BJD13_20280 e3960033c6107905e9e710305bddf7fa 258 PRINTS PR00599 Methionine aminopeptidase-1 signature 159 171 3.4E-18 T 17-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 BJD13_20280 e3960033c6107905e9e710305bddf7fa 258 Gene3D G3DSA:3.90.230.10 1 253 3.0E-92 T 17-10-2018 BJD13_20280 e3960033c6107905e9e710305bddf7fa 258 SUPERFAMILY SSF55920 2 252 1.7E-81 T 17-10-2018 IPR036005 Creatinase/aminopeptidase-like BJD13_20280 e3960033c6107905e9e710305bddf7fa 258 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 165 183 - T 17-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 BJD13_16590 94ac146ef0b440d5d2fd62d83e99f607 1240 Pfam PF01435 Peptidase family M48 133 346 2.2E-14 T 17-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 BJD13_08735 3931e782cae6bc917c16e1b6ad988968 324 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 311 6.1E-14 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD13_08735 3931e782cae6bc917c16e1b6ad988968 324 SUPERFAMILY SSF161098 33 311 5.23E-34 T 17-10-2018 IPR035906 MetI-like superfamily BJD13_08735 3931e782cae6bc917c16e1b6ad988968 324 Gene3D G3DSA:1.10.3720.10 78 321 6.9E-34 T 17-10-2018 IPR035906 MetI-like superfamily BJD13_08735 3931e782cae6bc917c16e1b6ad988968 324 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 25 317 1.2E-90 T 17-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 BJD13_13655 8923fbb141f370313a3b07962209c5d9 728 Pfam PF00672 HAMP domain 214 261 8.4E-9 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_13655 8923fbb141f370313a3b07962209c5d9 728 SUPERFAMILY SSF58104 412 695 1.96E-72 T 17-10-2018 BJD13_13655 8923fbb141f370313a3b07962209c5d9 728 SMART SM01049 37 130 3.5E-28 T 17-10-2018 IPR033480 Single Cache domain 2 BJD13_13655 8923fbb141f370313a3b07962209c5d9 728 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 466 495 1.6E-56 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD13_13655 8923fbb141f370313a3b07962209c5d9 728 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 572 601 1.6E-56 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD13_13655 8923fbb141f370313a3b07962209c5d9 728 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 543 570 1.6E-56 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD13_13655 8923fbb141f370313a3b07962209c5d9 728 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 620 649 1.6E-56 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD13_13655 8923fbb141f370313a3b07962209c5d9 728 SMART SM00304 392 444 0.08 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_13655 8923fbb141f370313a3b07962209c5d9 728 SMART SM00304 212 264 3.2E-9 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_13655 8923fbb141f370313a3b07962209c5d9 728 SMART SM00283 445 692 2.8E-89 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD13_13655 8923fbb141f370313a3b07962209c5d9 728 SUPERFAMILY SSF158472 214 261 1.44E-8 T 17-10-2018 BJD13_13655 8923fbb141f370313a3b07962209c5d9 728 Gene3D G3DSA:3.30.450.20 39 185 1.0E-39 T 17-10-2018 BJD13_13655 8923fbb141f370313a3b07962209c5d9 728 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 510 659 3.0E-52 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD13_13655 8923fbb141f370313a3b07962209c5d9 728 Gene3D G3DSA:1.10.287.950 395 694 2.0E-85 T 17-10-2018 BJD13_13655 8923fbb141f370313a3b07962209c5d9 728 Pfam PF17200 Single Cache domain 2 42 189 6.9E-38 T 17-10-2018 IPR033480 Single Cache domain 2 BJD13_13655 8923fbb141f370313a3b07962209c5d9 728 Gene3D G3DSA:1.20.120.1530 205 349 5.7E-30 T 17-10-2018 BJD13_18630 5e52bc872d2cbaed791d2f01084c998f 257 SUPERFAMILY SSF53901 6 183 8.64E-10 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 BJD13_18630 5e52bc872d2cbaed791d2f01084c998f 257 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 30 166 1.5E-22 T 17-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal BJD13_16000 0b67c97e18af23f98271c4e9a656dad9 328 SUPERFAMILY SSF74653 16 66 4.45E-9 T 17-10-2018 BJD13_16000 0b67c97e18af23f98271c4e9a656dad9 328 Gene3D G3DSA:3.30.1150.10 13 79 5.8E-9 T 17-10-2018 BJD13_16000 0b67c97e18af23f98271c4e9a656dad9 328 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 92 154 1.7E-7 T 17-10-2018 IPR006260 TonB/TolA, C-terminal BJD13_16000 0b67c97e18af23f98271c4e9a656dad9 328 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 18 76 8.6E-11 T 17-10-2018 IPR006260 TonB/TolA, C-terminal BJD13_16000 0b67c97e18af23f98271c4e9a656dad9 328 Gene3D G3DSA:3.30.1150.10 82 168 1.4E-6 T 17-10-2018 BJD13_16000 0b67c97e18af23f98271c4e9a656dad9 328 SUPERFAMILY SSF74653 90 168 9.29E-8 T 17-10-2018 BJD13_16000 0b67c97e18af23f98271c4e9a656dad9 328 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 20 63 2.7E-7 T 17-10-2018 IPR037682 TonB, C-terminal GO:0055085 BJD13_16000 0b67c97e18af23f98271c4e9a656dad9 328 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 91 167 5.5E-6 T 17-10-2018 IPR037682 TonB, C-terminal GO:0055085 BJD13_12055 213f95532a9e5356946b85d866839295 217 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 4 215 24.448 T 17-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 BJD13_12055 213f95532a9e5356946b85d866839295 217 Gene3D G3DSA:2.50.20.10 39 216 5.4E-39 T 17-10-2018 BJD13_12055 213f95532a9e5356946b85d866839295 217 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 52 214 4.8E-25 T 17-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 BJD13_12055 213f95532a9e5356946b85d866839295 217 SUPERFAMILY SSF89392 44 215 2.0E-38 T 17-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX BJD13_12055 213f95532a9e5356946b85d866839295 217 Pfam PF03550 Outer membrane lipoprotein LolB 58 213 3.8E-39 T 17-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 BJD13_13180 c758210bf1b9a7eb773d5c9ff1b033c5 362 SUPERFAMILY SSF53067 1 134 6.73E-16 T 17-10-2018 BJD13_13180 c758210bf1b9a7eb773d5c9ff1b033c5 362 Pfam PF05134 Type II secretion system (T2SS), protein L 41 158 6.1E-15 T 17-10-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain BJD13_13180 c758210bf1b9a7eb773d5c9ff1b033c5 362 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 5 360 3.8E-65 T 17-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 BJD13_13180 c758210bf1b9a7eb773d5c9ff1b033c5 362 Gene3D G3DSA:3.30.420.370 134 197 1.3E-18 T 17-10-2018 BJD13_13180 c758210bf1b9a7eb773d5c9ff1b033c5 362 Gene3D G3DSA:3.30.420.380 22 203 1.3E-18 T 17-10-2018 BJD13_19070 ed966a31cae6d1663f50eee81bee70f2 302 SUPERFAMILY SSF103481 61 148 4.84E-11 T 17-10-2018 BJD13_19070 ed966a31cae6d1663f50eee81bee70f2 302 Pfam PF00892 EamA-like transporter family 156 288 2.0E-8 T 17-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BJD13_19070 ed966a31cae6d1663f50eee81bee70f2 302 Pfam PF00892 EamA-like transporter family 12 147 7.7E-12 T 17-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BJD13_19070 ed966a31cae6d1663f50eee81bee70f2 302 SUPERFAMILY SSF103481 213 290 9.81E-11 T 17-10-2018 BJD13_19070 ed966a31cae6d1663f50eee81bee70f2 302 TIGRFAM TIGR00688 rarD: protein RarD 11 264 1.3E-60 T 17-10-2018 IPR004626 RarD protein GO:0005887 BJD13_16810 61f24e6e9e04a46d1ed46d7a3811f08a 1490 Gene3D G3DSA:2.160.20.60 1209 1480 9.8E-100 T 17-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 BJD13_16810 61f24e6e9e04a46d1ed46d7a3811f08a 1490 SUPERFAMILY SSF51395 457 1204 9.16E-248 T 17-10-2018 BJD13_16810 61f24e6e9e04a46d1ed46d7a3811f08a 1490 Gene3D G3DSA:3.60.20.10 25 555 0.0 T 17-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BJD13_16810 61f24e6e9e04a46d1ed46d7a3811f08a 1490 Pfam PF04898 Glutamate synthase central domain 468 750 2.4E-98 T 17-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 BJD13_16810 61f24e6e9e04a46d1ed46d7a3811f08a 1490 Pfam PF00310 Glutamine amidotransferases class-II 25 437 1.8E-152 T 17-10-2018 IPR017932 Glutamine amidotransferase type 2 domain BJD13_16810 61f24e6e9e04a46d1ed46d7a3811f08a 1490 Pfam PF01493 GXGXG motif 1247 1430 9.6E-76 T 17-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 BJD13_16810 61f24e6e9e04a46d1ed46d7a3811f08a 1490 SUPERFAMILY SSF69336 1221 1476 1.83E-86 T 17-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 BJD13_16810 61f24e6e9e04a46d1ed46d7a3811f08a 1490 Gene3D G3DSA:3.20.20.70 493 1184 0.0 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD13_16810 61f24e6e9e04a46d1ed46d7a3811f08a 1490 Gene3D G3DSA:3.20.20.70 442 805 0.0 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD13_16810 61f24e6e9e04a46d1ed46d7a3811f08a 1490 Pfam PF01645 Conserved region in glutamate synthase 806 1169 4.0E-147 T 17-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 BJD13_16810 61f24e6e9e04a46d1ed46d7a3811f08a 1490 SUPERFAMILY SSF56235 25 440 8.49E-129 T 17-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BJD13_05070 1af951a774e9c16b1eaa443d0969fba7 1030 Pfam PF07730 Histidine kinase 806 870 5.7E-11 T 17-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 BJD13_05070 1af951a774e9c16b1eaa443d0969fba7 1030 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 913 1005 2.0E-8 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_05070 1af951a774e9c16b1eaa443d0969fba7 1030 Gene3D G3DSA:2.130.10.10 139 348 2.7E-15 T 17-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BJD13_05070 1af951a774e9c16b1eaa443d0969fba7 1030 Gene3D G3DSA:2.130.10.10 47 138 6.4E-6 T 17-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BJD13_05070 1af951a774e9c16b1eaa443d0969fba7 1030 Gene3D G3DSA:3.30.565.10 869 1005 1.5E-23 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_05070 1af951a774e9c16b1eaa443d0969fba7 1030 SUPERFAMILY SSF63829 418 650 1.66E-7 T 17-10-2018 BJD13_05070 1af951a774e9c16b1eaa443d0969fba7 1030 Gene3D G3DSA:2.130.10.10 396 652 3.6E-12 T 17-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BJD13_05070 1af951a774e9c16b1eaa443d0969fba7 1030 SUPERFAMILY SSF55874 871 1005 9.69E-16 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_05070 1af951a774e9c16b1eaa443d0969fba7 1030 SUPERFAMILY SSF63829 131 319 8.28E-10 T 17-10-2018 BJD13_05070 1af951a774e9c16b1eaa443d0969fba7 1030 Pfam PF07495 Y_Y_Y domain 699 759 2.0E-17 T 17-10-2018 IPR011123 Two component regulator three Y BJD13_05070 1af951a774e9c16b1eaa443d0969fba7 1030 Gene3D G3DSA:2.60.40.10 653 772 2.8E-28 T 17-10-2018 IPR013783 Immunoglobulin-like fold BJD13_05070 1af951a774e9c16b1eaa443d0969fba7 1030 SMART SM00387 910 1007 1.2E-7 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_19575 1500a2e1af54d1793440b265c840d067 320 Pfam PF03631 Virulence factor BrkB 32 279 5.1E-50 T 17-10-2018 IPR017039 Virulence factor BrkB BJD13_19575 1500a2e1af54d1793440b265c840d067 320 PIRSF PIRSF035875 5 296 1.3E-63 T 17-10-2018 IPR017039 Virulence factor BrkB BJD13_19575 1500a2e1af54d1793440b265c840d067 320 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 22 278 3.4E-29 T 17-10-2018 IPR017039 Virulence factor BrkB BJD13_17330 96033ee4277dd3d535d01ede556f1116 300 Gene3D G3DSA:3.30.2350.10 85 292 4.8E-42 T 17-10-2018 BJD13_17330 96033ee4277dd3d535d01ede556f1116 300 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 134 148 - T 17-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD13_17330 96033ee4277dd3d535d01ede556f1116 300 Pfam PF00849 RNA pseudouridylate synthase 96 242 1.6E-26 T 17-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD13_17330 96033ee4277dd3d535d01ede556f1116 300 SUPERFAMILY SSF55120 80 292 2.47E-49 T 17-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD13_05395 309ff96646da9a293c0e6e622400ac72 154 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 3 144 1.2E-37 T 17-10-2018 IPR023485 Phosphotyrosine protein phosphatase I BJD13_05395 309ff96646da9a293c0e6e622400ac72 154 Gene3D G3DSA:3.40.50.2300 1 153 5.2E-52 T 17-10-2018 BJD13_05395 309ff96646da9a293c0e6e622400ac72 154 SMART SM00226 1 150 3.2E-48 T 17-10-2018 IPR023485 Phosphotyrosine protein phosphatase I BJD13_05395 309ff96646da9a293c0e6e622400ac72 154 SUPERFAMILY SSF52788 1 150 1.27E-48 T 17-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily BJD13_05395 309ff96646da9a293c0e6e622400ac72 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 3 20 2.7E-25 T 17-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 BJD13_05395 309ff96646da9a293c0e6e622400ac72 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 122 137 2.7E-25 T 17-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 BJD13_05395 309ff96646da9a293c0e6e622400ac72 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 80 95 2.7E-25 T 17-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 BJD13_05395 309ff96646da9a293c0e6e622400ac72 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 46 62 2.7E-25 T 17-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 BJD13_14920 1829b40f752d77e0bc0701e21106d1fd 86 TIGRFAM TIGR01403 fliQ_rel_III: type III secretion protein, HrpO family 5 83 9.8E-27 T 17-10-2018 IPR006306 Type III secretion protein HrpO GO:0009306|GO:0016021 BJD13_14920 1829b40f752d77e0bc0701e21106d1fd 86 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 5.0E-16 T 17-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BJD13_14920 1829b40f752d77e0bc0701e21106d1fd 86 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 5.0E-16 T 17-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BJD13_14920 1829b40f752d77e0bc0701e21106d1fd 86 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 5.0E-16 T 17-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BJD13_14920 1829b40f752d77e0bc0701e21106d1fd 86 Pfam PF01313 Bacterial export proteins, family 3 6 76 3.5E-19 T 17-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BJD13_20365 72d75e3c78a6748624b55430cbf93113 240 SMART SM00382 29 211 1.8E-12 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_20365 72d75e3c78a6748624b55430cbf93113 240 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD13_20365 72d75e3c78a6748624b55430cbf93113 240 Pfam PF00005 ABC transporter 20 163 6.7E-25 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD13_20365 72d75e3c78a6748624b55430cbf93113 240 SUPERFAMILY SSF52540 4 217 1.31E-51 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_20365 72d75e3c78a6748624b55430cbf93113 240 Gene3D G3DSA:3.40.50.300 1 221 1.2E-55 T 17-10-2018 BJD13_07935 61547f283667382b3476a69c7872a7ac 300 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 22 37 - T 17-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BJD13_07935 61547f283667382b3476a69c7872a7ac 300 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 56 69 - T 17-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BJD13_07935 61547f283667382b3476a69c7872a7ac 300 Pfam PF00809 Pterin binding enzyme 23 263 6.7E-82 T 17-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BJD13_07935 61547f283667382b3476a69c7872a7ac 300 SUPERFAMILY SSF51717 14 280 4.06E-98 T 17-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BJD13_07935 61547f283667382b3476a69c7872a7ac 300 Gene3D G3DSA:3.20.20.20 2 282 1.2E-108 T 17-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BJD13_07935 61547f283667382b3476a69c7872a7ac 300 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 21 278 3.0E-98 T 17-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 BJD13_13140 cae0330f65dc9b4b88f1a99e4f44f5b5 889 Gene3D G3DSA:2.170.130.10 65 209 1.2E-12 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_13140 cae0330f65dc9b4b88f1a99e4f44f5b5 889 Gene3D G3DSA:2.40.170.20 298 889 4.6E-55 T 17-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BJD13_13140 cae0330f65dc9b4b88f1a99e4f44f5b5 889 SUPERFAMILY SSF56935 74 888 1.49E-90 T 17-10-2018 BJD13_13140 cae0330f65dc9b4b88f1a99e4f44f5b5 889 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 73 888 1.0E-200 T 17-10-2018 IPR010104 Bacterial TonB-dependent receptor BJD13_13140 cae0330f65dc9b4b88f1a99e4f44f5b5 889 Pfam PF07715 TonB-dependent Receptor Plug Domain 92 204 1.5E-13 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_13140 cae0330f65dc9b4b88f1a99e4f44f5b5 889 Pfam PF00593 TonB dependent receptor 363 888 1.7E-38 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_16265 c766d8b056906f728591077fac676a03 358 Pfam PF07859 alpha/beta hydrolase fold 112 313 5.6E-15 T 17-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 BJD13_16265 c766d8b056906f728591077fac676a03 358 SUPERFAMILY SSF53474 91 351 2.75E-42 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_16265 c766d8b056906f728591077fac676a03 358 Gene3D G3DSA:3.40.50.1820 84 338 1.6E-61 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_00410 7781a672f3954c501a32ddeeda88aa02 770 Pfam PF00580 UvrD/REP helicase N-terminal domain 6 264 1.4E-30 T 17-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 BJD13_00410 7781a672f3954c501a32ddeeda88aa02 770 SUPERFAMILY SSF52540 4 632 2.66E-81 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_00410 7781a672f3954c501a32ddeeda88aa02 770 Gene3D G3DSA:1.10.10.160 104 189 2.2E-49 T 17-10-2018 IPR013986 DExx box DNA helicase domain superfamily BJD13_00410 7781a672f3954c501a32ddeeda88aa02 770 Gene3D G3DSA:3.40.50.300 292 632 9.7E-37 T 17-10-2018 BJD13_00410 7781a672f3954c501a32ddeeda88aa02 770 Gene3D G3DSA:3.40.50.300 7 272 2.2E-49 T 17-10-2018 BJD13_00410 7781a672f3954c501a32ddeeda88aa02 770 Pfam PF13361 UvrD-like helicase C-terminal domain 513 624 1.2E-17 T 17-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 BJD13_00410 7781a672f3954c501a32ddeeda88aa02 770 Gene3D G3DSA:1.10.486.10 381 555 9.7E-37 T 17-10-2018 BJD13_20210 555292f1c1506894c5bb9ad6be18751f 155 Pfam PF05926 Phage head completion protein (GPL) 17 155 1.5E-51 T 17-10-2018 IPR009225 Bacteriophage head completion protein GpL GO:0019069 BJD13_02710 ee7558fff72503920e7d497f1e44337a 285 Gene3D G3DSA:3.40.30.10 1 111 1.1E-32 T 17-10-2018 BJD13_02710 ee7558fff72503920e7d497f1e44337a 285 Gene3D G3DSA:1.25.40.10 199 285 3.9E-17 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_02710 ee7558fff72503920e7d497f1e44337a 285 TIGRFAM TIGR01068 thioredoxin: thioredoxin 13 111 6.0E-31 T 17-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 BJD13_02710 ee7558fff72503920e7d497f1e44337a 285 Gene3D G3DSA:1.25.40.10 132 196 2.7E-6 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_02710 ee7558fff72503920e7d497f1e44337a 285 Pfam PF00085 Thioredoxin 8 111 3.5E-27 T 17-10-2018 IPR013766 Thioredoxin domain GO:0045454 BJD13_02710 ee7558fff72503920e7d497f1e44337a 285 Pfam PF14559 Tetratricopeptide repeat 135 192 7.2E-7 T 17-10-2018 BJD13_02710 ee7558fff72503920e7d497f1e44337a 285 SUPERFAMILY SSF52833 6 111 2.16E-34 T 17-10-2018 IPR036249 Thioredoxin-like superfamily BJD13_02710 ee7558fff72503920e7d497f1e44337a 285 SUPERFAMILY SSF48435 98 252 2.48E-5 T 17-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 BJD13_02710 ee7558fff72503920e7d497f1e44337a 285 Pfam PF14561 Tetratricopeptide repeat 199 285 1.0E-17 T 17-10-2018 BJD13_02710 ee7558fff72503920e7d497f1e44337a 285 ProSitePatterns PS00194 Thioredoxin family active site. 29 47 - T 17-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 BJD13_02710 ee7558fff72503920e7d497f1e44337a 285 PRINTS PR00421 Thioredoxin family signature 36 45 1.7E-6 T 17-10-2018 BJD13_02710 ee7558fff72503920e7d497f1e44337a 285 PRINTS PR00421 Thioredoxin family signature 28 36 1.7E-6 T 17-10-2018 BJD13_02710 ee7558fff72503920e7d497f1e44337a 285 PRINTS PR00421 Thioredoxin family signature 76 87 1.7E-6 T 17-10-2018 BJD13_10360 795124674285df11b186fe3c7d5e9b1e 316 Gene3D G3DSA:3.40.1010.20 6 283 6.4E-110 T 17-10-2018 BJD13_10360 795124674285df11b186fe3c7d5e9b1e 316 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 3 286 6.9E-100 T 17-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 BJD13_10360 795124674285df11b186fe3c7d5e9b1e 316 Gene3D G3DSA:3.40.50.11270 12 96 6.4E-110 T 17-10-2018 BJD13_10360 795124674285df11b186fe3c7d5e9b1e 316 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 288 38.725 T 17-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 BJD13_10360 795124674285df11b186fe3c7d5e9b1e 316 Gene3D G3DSA:3.40.1010.20 97 198 6.4E-110 T 17-10-2018 BJD13_10360 795124674285df11b186fe3c7d5e9b1e 316 Pfam PF02401 LytB protein 3 284 8.5E-92 T 17-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 BJD13_18230 03d13ecc61da0d59ac926b058146d839 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 13.714 T 17-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_18230 03d13ecc61da0d59ac926b058146d839 55 SUPERFAMILY SSF57829 1 53 2.56E-19 T 17-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 BJD13_18230 03d13ecc61da0d59ac926b058146d839 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 1.6E-23 T 17-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_18230 03d13ecc61da0d59ac926b058146d839 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 17-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_18230 03d13ecc61da0d59ac926b058146d839 55 Pfam PF00471 Ribosomal protein L33 8 53 1.5E-17 T 17-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_18230 03d13ecc61da0d59ac926b058146d839 55 Gene3D G3DSA:2.20.28.120 1 55 8.0E-27 T 17-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_14655 6d857ea167f04bd4d726abe8a094e795 127 Pfam PF07653 Variant SH3 domain 2 57 1.8E-6 T 17-10-2018 IPR001452 SH3 domain GO:0005515 BJD13_14655 6d857ea167f04bd4d726abe8a094e795 127 Gene3D G3DSA:2.30.30.40 62 114 2.8E-6 T 17-10-2018 BJD13_14655 6d857ea167f04bd4d726abe8a094e795 127 SUPERFAMILY SSF50044 62 125 2.1E-9 T 17-10-2018 IPR036028 SH3-like domain superfamily GO:0005515 BJD13_14655 6d857ea167f04bd4d726abe8a094e795 127 PIRSF PIRSF034961 1 114 5.8E-48 T 17-10-2018 IPR014593 Uncharacterised conserved protein UCP034961, SH3-2 BJD13_14655 6d857ea167f04bd4d726abe8a094e795 127 SMART SM00326 61 113 5.3E-4 T 17-10-2018 IPR001452 SH3 domain GO:0005515 BJD13_05940 92caafdf26bd3e179a1501d3a9de1b41 167 SUPERFAMILY SSF160719 41 153 1.02E-8 T 17-10-2018 BJD13_05940 92caafdf26bd3e179a1501d3a9de1b41 167 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 11 161 1.4E-21 T 17-10-2018 IPR017737 Type VI secretion system, lysozyme-related protein BJD13_05940 92caafdf26bd3e179a1501d3a9de1b41 167 Pfam PF04965 Gene 25-like lysozyme 39 142 4.6E-18 T 17-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD BJD13_03685 7d4dc7ff97d9d2d28ea2e19f23c68fd1 284 SUPERFAMILY SSF82771 33 109 2.09E-8 T 17-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 BJD13_03685 7d4dc7ff97d9d2d28ea2e19f23c68fd1 284 Gene3D G3DSA:3.40.1440.10 19 111 4.0E-19 T 17-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 BJD13_03685 7d4dc7ff97d9d2d28ea2e19f23c68fd1 284 SMART SM00465 32 110 1.6E-9 T 17-10-2018 IPR000305 GIY-YIG endonuclease BJD13_22475 a7012546efe79eeaef17a63cbdf1a6a9 667 Gene3D G3DSA:2.170.130.10 22 161 4.9E-17 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_22475 a7012546efe79eeaef17a63cbdf1a6a9 667 Gene3D G3DSA:2.40.170.20 166 667 8.1E-67 T 17-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BJD13_22475 a7012546efe79eeaef17a63cbdf1a6a9 667 Pfam PF07715 TonB-dependent Receptor Plug Domain 43 150 1.2E-18 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_22475 a7012546efe79eeaef17a63cbdf1a6a9 667 SUPERFAMILY SSF56935 19 667 3.05E-95 T 17-10-2018 BJD13_22475 a7012546efe79eeaef17a63cbdf1a6a9 667 Pfam PF00593 TonB dependent receptor 226 665 3.2E-38 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_11990 0371b2fba7ffcf63e87f12e773f3ff91 185 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 4 184 2.6E-61 T 17-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 BJD13_11990 0371b2fba7ffcf63e87f12e773f3ff91 185 Gene3D G3DSA:2.30.30.30 126 184 9.9E-25 T 17-10-2018 IPR014722 Ribosomal protein L2, domain 2 BJD13_11990 0371b2fba7ffcf63e87f12e773f3ff91 185 SMART SM00739 131 158 2.6E-5 T 17-10-2018 IPR005824 KOW BJD13_11990 0371b2fba7ffcf63e87f12e773f3ff91 185 PRINTS PR00338 Transcription termination factor NUSG signature 161 177 8.3E-19 T 17-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 BJD13_11990 0371b2fba7ffcf63e87f12e773f3ff91 185 PRINTS PR00338 Transcription termination factor NUSG signature 56 68 8.3E-19 T 17-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 BJD13_11990 0371b2fba7ffcf63e87f12e773f3ff91 185 PRINTS PR00338 Transcription termination factor NUSG signature 143 158 8.3E-19 T 17-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 BJD13_11990 0371b2fba7ffcf63e87f12e773f3ff91 185 ProSitePatterns PS01014 Transcription termination factor nusG signature. 168 177 - T 17-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site BJD13_11990 0371b2fba7ffcf63e87f12e773f3ff91 185 Gene3D G3DSA:3.30.70.940 1 125 8.4E-42 T 17-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 BJD13_11990 0371b2fba7ffcf63e87f12e773f3ff91 185 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 1 185 23.001 T 17-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 BJD13_11990 0371b2fba7ffcf63e87f12e773f3ff91 185 SUPERFAMILY SSF50104 129 184 2.66E-18 T 17-10-2018 IPR008991 Translation protein SH3-like domain superfamily BJD13_11990 0371b2fba7ffcf63e87f12e773f3ff91 185 SMART SM00738 1 119 4.2E-42 T 17-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 BJD13_11990 0371b2fba7ffcf63e87f12e773f3ff91 185 SUPERFAMILY SSF82679 2 121 1.96E-35 T 17-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 BJD13_11990 0371b2fba7ffcf63e87f12e773f3ff91 185 Pfam PF00467 KOW motif 134 168 3.1E-7 T 17-10-2018 IPR005824 KOW BJD13_11990 0371b2fba7ffcf63e87f12e773f3ff91 185 Pfam PF02357 Transcription termination factor nusG 2 116 1.8E-22 T 17-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 BJD13_14570 4c3b036441f355a25d69e07bbc4b2b56 124 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 7 109 1.2E-22 T 17-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like BJD13_14190 233c701c0f9ae22abe9673513e66d0fc 596 Pfam PF00932 Lamin Tail Domain 25 133 8.4E-8 T 17-10-2018 IPR001322 Lamin tail domain BJD13_14190 233c701c0f9ae22abe9673513e66d0fc 596 Pfam PF04231 Endonuclease I 325 577 3.0E-37 T 17-10-2018 IPR007346 Endonuclease I GO:0004518 BJD13_14190 233c701c0f9ae22abe9673513e66d0fc 596 Pfam PF13205 Bacterial Ig-like domain 205 304 6.7E-15 T 17-10-2018 IPR032812 SbsA, Ig-like domain BJD13_14190 233c701c0f9ae22abe9673513e66d0fc 596 SUPERFAMILY SSF54060 319 577 1.06E-44 T 17-10-2018 BJD13_12390 5101846ca37f57876d09c76fb82d6a58 492 Gene3D G3DSA:3.40.50.12780 3 388 3.0E-95 T 17-10-2018 BJD13_12390 5101846ca37f57876d09c76fb82d6a58 492 Gene3D G3DSA:3.30.300.310 391 491 2.2E-33 T 17-10-2018 BJD13_12390 5101846ca37f57876d09c76fb82d6a58 492 ProSitePatterns PS00455 Putative AMP-binding domain signature. 146 157 - T 17-10-2018 IPR020845 AMP-binding, conserved site BJD13_12390 5101846ca37f57876d09c76fb82d6a58 492 Pfam PF00501 AMP-binding enzyme 28 395 5.5E-84 T 17-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BJD13_12390 5101846ca37f57876d09c76fb82d6a58 492 Pfam PF13193 AMP-binding enzyme C-terminal domain 404 478 9.9E-19 T 17-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BJD13_12390 5101846ca37f57876d09c76fb82d6a58 492 SUPERFAMILY SSF56801 6 490 1.57E-133 T 17-10-2018 BJD13_09685 60ff367e000c38e22881c141d1283667 332 PRINTS PR00075 Fatty acid desaturase family 1 signature 231 252 2.3E-18 T 17-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 BJD13_09685 60ff367e000c38e22881c141d1283667 332 PRINTS PR00075 Fatty acid desaturase family 1 signature 274 288 2.3E-18 T 17-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 BJD13_09685 60ff367e000c38e22881c141d1283667 332 PRINTS PR00075 Fatty acid desaturase family 1 signature 135 164 2.3E-18 T 17-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 BJD13_09685 60ff367e000c38e22881c141d1283667 332 PRINTS PR00075 Fatty acid desaturase family 1 signature 98 118 2.3E-18 T 17-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 BJD13_09685 60ff367e000c38e22881c141d1283667 332 PRINTS PR00075 Fatty acid desaturase family 1 signature 53 73 2.3E-18 T 17-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 BJD13_09685 60ff367e000c38e22881c141d1283667 332 Pfam PF00487 Fatty acid desaturase 75 302 6.1E-27 T 17-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 BJD13_13255 960f30a63f17b050ee6fee45baf8559a 394 Gene3D G3DSA:3.40.50.12710 4 394 3.0E-112 T 17-10-2018 IPR038375 Protein arginine methyltransferase NDUFAF7 superfamily Reactome: R-HSA-6799198 BJD13_13255 960f30a63f17b050ee6fee45baf8559a 394 SUPERFAMILY SSF53335 21 379 3.65E-85 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_13255 960f30a63f17b050ee6fee45baf8559a 394 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 83 322 4.7E-44 T 17-10-2018 IPR003788 Protein arginine methyltransferase NDUFAF7 Reactome: R-HSA-6799198 BJD13_07115 1c2c3e7f904fa53b0e8aeec20e7c1ea2 619 Pfam PF13387 Domain of unknown function (DUF4105) 234 400 1.7E-30 T 17-10-2018 IPR025178 Domain of unknown function DUF4105 BJD13_17785 3aa3c4a54c1780ca41aeb4b8f63494dd 490 SUPERFAMILY SSF48179 282 472 9.52E-51 T 17-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BJD13_17785 3aa3c4a54c1780ca41aeb4b8f63494dd 490 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 31 187 2.4E-37 T 17-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 BJD13_17785 3aa3c4a54c1780ca41aeb4b8f63494dd 490 SUPERFAMILY SSF51735 6 279 1.06E-90 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_17785 3aa3c4a54c1780ca41aeb4b8f63494dd 490 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 215 450 6.7E-62 T 17-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 BJD13_17785 3aa3c4a54c1780ca41aeb4b8f63494dd 490 Gene3D G3DSA:3.40.50.720 4 280 2.3E-104 T 17-10-2018 BJD13_17785 3aa3c4a54c1780ca41aeb4b8f63494dd 490 PRINTS PR00084 Mannitol dehydrogenase signature 247 262 2.4E-15 T 17-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 BJD13_17785 3aa3c4a54c1780ca41aeb4b8f63494dd 490 PRINTS PR00084 Mannitol dehydrogenase signature 178 191 2.4E-15 T 17-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 BJD13_17785 3aa3c4a54c1780ca41aeb4b8f63494dd 490 PRINTS PR00084 Mannitol dehydrogenase signature 217 230 2.4E-15 T 17-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 BJD13_17785 3aa3c4a54c1780ca41aeb4b8f63494dd 490 PRINTS PR00084 Mannitol dehydrogenase signature 32 42 2.4E-15 T 17-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 BJD13_17785 3aa3c4a54c1780ca41aeb4b8f63494dd 490 Gene3D G3DSA:1.10.1040.10 281 485 9.6E-62 T 17-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BJD13_19195 5087d31125e797ca59af6dcbae3a13dd 295 Gene3D G3DSA:3.40.50.720 1 283 1.1E-76 T 17-10-2018 BJD13_19195 5087d31125e797ca59af6dcbae3a13dd 295 SUPERFAMILY SSF51735 1 293 9.77E-43 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_19195 5087d31125e797ca59af6dcbae3a13dd 295 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 4 289 2.7E-103 T 17-10-2018 IPR010099 Epimerase family protein SDR39U1 BJD13_19195 5087d31125e797ca59af6dcbae3a13dd 295 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 120 4.4E-13 T 17-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 BJD13_19195 5087d31125e797ca59af6dcbae3a13dd 295 Pfam PF08338 Domain of unknown function (DUF1731) 247 292 9.3E-19 T 17-10-2018 IPR013549 Domain of unknown function DUF1731 BJD13_01900 de1dfe5f99b4aa74f125ed474d9bdd5b 604 Gene3D G3DSA:2.40.30.10 266 449 5.9E-6 T 17-10-2018 BJD13_01900 de1dfe5f99b4aa74f125ed474d9bdd5b 604 SUPERFAMILY SSF52218 76 219 5.66E-36 T 17-10-2018 IPR029039 Flavoprotein-like superfamily BJD13_01900 de1dfe5f99b4aa74f125ed474d9bdd5b 604 SUPERFAMILY SSF52343 461 604 5.89E-34 T 17-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BJD13_01900 de1dfe5f99b4aa74f125ed474d9bdd5b 604 SUPERFAMILY SSF63380 226 462 2.04E-14 T 17-10-2018 IPR017938 Riboflavin synthase-like beta-barrel BJD13_01900 de1dfe5f99b4aa74f125ed474d9bdd5b 604 PRINTS PR00369 Flavodoxin signature 183 202 2.1E-9 T 17-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BJD13_01900 de1dfe5f99b4aa74f125ed474d9bdd5b 604 PRINTS PR00369 Flavodoxin signature 159 169 2.1E-9 T 17-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BJD13_01900 de1dfe5f99b4aa74f125ed474d9bdd5b 604 PRINTS PR00369 Flavodoxin signature 127 138 2.1E-9 T 17-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BJD13_01900 de1dfe5f99b4aa74f125ed474d9bdd5b 604 PRINTS PR00369 Flavodoxin signature 79 92 2.1E-9 T 17-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BJD13_01900 de1dfe5f99b4aa74f125ed474d9bdd5b 604 Gene3D G3DSA:3.40.50.360 68 226 8.9E-37 T 17-10-2018 IPR029039 Flavoprotein-like superfamily BJD13_01900 de1dfe5f99b4aa74f125ed474d9bdd5b 604 Gene3D G3DSA:3.40.50.80 461 604 1.9E-34 T 17-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BJD13_01900 de1dfe5f99b4aa74f125ed474d9bdd5b 604 Pfam PF00258 Flavodoxin 80 205 8.6E-26 T 17-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 BJD13_01900 de1dfe5f99b4aa74f125ed474d9bdd5b 604 Pfam PF00175 Oxidoreductase NAD-binding domain 472 575 1.1E-10 T 17-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 BJD13_01900 de1dfe5f99b4aa74f125ed474d9bdd5b 604 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 563 571 9.7E-9 T 17-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BJD13_01900 de1dfe5f99b4aa74f125ed474d9bdd5b 604 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 471 490 9.7E-9 T 17-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BJD13_01900 de1dfe5f99b4aa74f125ed474d9bdd5b 604 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 508 519 9.7E-9 T 17-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BJD13_01900 de1dfe5f99b4aa74f125ed474d9bdd5b 604 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 407 414 9.7E-9 T 17-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BJD13_01900 de1dfe5f99b4aa74f125ed474d9bdd5b 604 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 495 504 9.7E-9 T 17-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BJD13_01900 de1dfe5f99b4aa74f125ed474d9bdd5b 604 Gene3D G3DSA:1.20.990.10 278 405 5.9E-6 T 17-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 BJD13_04755 4a03036a8d97e55652068eb9f99d6345 143 Gene3D G3DSA:1.10.8.640 24 106 6.9E-32 T 17-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily BJD13_04755 4a03036a8d97e55652068eb9f99d6345 143 Pfam PF03918 Cytochrome C biogenesis protein 25 136 5.5E-48 T 17-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family BJD13_20085 da650f435fb7b2cec8084b944852f2f8 85 TIGRFAM TIGR04111 BcepMu_gp16: phage-associated protein, BcepMu gp16 family 15 68 1.8E-22 T 17-10-2018 IPR026365 Phage-associated protein, BcepMu gp16 family BJD13_20085 da650f435fb7b2cec8084b944852f2f8 85 SUPERFAMILY SSF47413 19 69 1.54E-5 T 17-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BJD13_07680 7ef98b6415d0d8ea30af924fbe188d86 391 Gene3D G3DSA:2.60.40.3500 21 125 3.0E-13 T 17-10-2018 BJD13_07680 7ef98b6415d0d8ea30af924fbe188d86 391 SMART SM00646 223 381 3.0E-52 T 17-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 BJD13_07680 7ef98b6415d0d8ea30af924fbe188d86 391 Gene3D G3DSA:3.40.630.40 149 388 4.4E-68 T 17-10-2018 BJD13_07680 7ef98b6415d0d8ea30af924fbe188d86 391 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 163 381 2.9E-43 T 17-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 BJD13_07680 7ef98b6415d0d8ea30af924fbe188d86 391 Pfam PF11741 AMIN domain 39 113 2.9E-10 T 17-10-2018 IPR021731 AMIN domain BJD13_07680 7ef98b6415d0d8ea30af924fbe188d86 391 SUPERFAMILY SSF53187 161 384 1.19E-49 T 17-10-2018 BJD13_05460 bcee077e24de87f4aa2d3da9aba95e49 403 Gene3D G3DSA:3.30.2320.10 269 397 4.8E-23 T 17-10-2018 BJD13_05460 bcee077e24de87f4aa2d3da9aba95e49 403 Pfam PF05065 Phage capsid family 145 401 7.5E-41 T 17-10-2018 IPR024455 Phage capsid BJD13_05460 bcee077e24de87f4aa2d3da9aba95e49 403 Gene3D G3DSA:3.30.2400.10 187 392 4.8E-23 T 17-10-2018 BJD13_05460 bcee077e24de87f4aa2d3da9aba95e49 403 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 4 401 5.2E-41 T 17-10-2018 IPR024455 Phage capsid BJD13_05460 bcee077e24de87f4aa2d3da9aba95e49 403 SUPERFAMILY SSF56563 135 402 2.62E-49 T 17-10-2018 BJD13_11395 d55e5a6e83f8b371212e263d67b93b27 78 Pfam PF01381 Helix-turn-helix 15 68 1.3E-15 T 17-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BJD13_11395 d55e5a6e83f8b371212e263d67b93b27 78 Gene3D G3DSA:1.10.260.40 2 78 5.1E-26 T 17-10-2018 BJD13_11395 d55e5a6e83f8b371212e263d67b93b27 78 SUPERFAMILY SSF47413 4 73 3.75E-16 T 17-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BJD13_11395 d55e5a6e83f8b371212e263d67b93b27 78 SMART SM00530 14 69 1.1E-13 T 17-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BJD13_23290 69a0cddd2c616b2a67c827ce5fc728c7 504 PIRSF PIRSF014728 1 498 1.2E-248 T 17-10-2018 IPR009199 PhoPQ-activated pathogenicity-related protein, PqaA type BJD13_23290 69a0cddd2c616b2a67c827ce5fc728c7 504 Gene3D G3DSA:3.40.50.1820 61 375 2.2E-16 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_23290 69a0cddd2c616b2a67c827ce5fc728c7 504 SUPERFAMILY SSF53474 203 374 2.63E-9 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_23290 69a0cddd2c616b2a67c827ce5fc728c7 504 Pfam PF10142 PhoPQ-activated pathogenicity-related protein 49 421 1.1E-130 T 17-10-2018 IPR009199 PhoPQ-activated pathogenicity-related protein, PqaA type BJD13_10935 98836b7e378e8f22433c2c85039c0708 154 Gene3D G3DSA:3.30.70.1290 12 154 8.4E-28 T 17-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 BJD13_10935 98836b7e378e8f22433c2c85039c0708 154 SMART SM01321 19 133 2.9E-27 T 17-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 BJD13_10935 98836b7e378e8f22433c2c85039c0708 154 SUPERFAMILY SSF143422 12 139 7.59E-28 T 17-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 BJD13_10935 98836b7e378e8f22433c2c85039c0708 154 Pfam PF01797 Transposase IS200 like 22 132 9.1E-15 T 17-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 BJD13_18065 ca1975a94ab3469c37d47961ce0f0e05 285 SUPERFAMILY SSF56529 62 279 5.76E-85 T 17-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 BJD13_18065 ca1975a94ab3469c37d47961ce0f0e05 285 Gene3D G3DSA:3.90.850.10 67 284 1.3E-89 T 17-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 BJD13_18065 ca1975a94ab3469c37d47961ce0f0e05 285 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 72 278 3.2E-74 T 17-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 BJD13_23190 d5ae08a0072a281f675c25077e1e1d11 227 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 18 224 36.639 T 17-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 BJD13_23190 d5ae08a0072a281f675c25077e1e1d11 227 PIRSF PIRSF000370 16 227 9.2E-69 T 17-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 BJD13_23190 d5ae08a0072a281f675c25077e1e1d11 227 SUPERFAMILY SSF102114 42 117 1.44E-14 T 17-10-2018 BJD13_23190 d5ae08a0072a281f675c25077e1e1d11 227 Gene3D G3DSA:3.20.20.70 18 221 2.7E-36 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD13_23190 d5ae08a0072a281f675c25077e1e1d11 227 Pfam PF04055 Radical SAM superfamily 41 123 3.9E-14 T 17-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BJD13_23190 d5ae08a0072a281f675c25077e1e1d11 227 Pfam PF13394 4Fe-4S single cluster domain 39 121 3.6E-10 T 17-10-2018 BJD13_23190 d5ae08a0072a281f675c25077e1e1d11 227 TIGRFAM TIGR04349 rSAM_QueE_gams: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 18 227 2.6E-111 T 17-10-2018 IPR027621 Putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE BJD13_19015 e064426c00776465680ea1acd8f19f90 150 Pfam PF03259 Roadblock/LC7 domain 36 108 1.8E-5 T 17-10-2018 IPR004942 Roadblock/LAMTOR2 domain BJD13_19015 e064426c00776465680ea1acd8f19f90 150 SUPERFAMILY SSF103196 28 146 5.93E-10 T 17-10-2018 BJD13_19015 e064426c00776465680ea1acd8f19f90 150 Gene3D G3DSA:3.30.450.30 26 149 5.9E-16 T 17-10-2018 BJD13_19015 e064426c00776465680ea1acd8f19f90 150 SMART SM00960 30 119 5.6E-7 T 17-10-2018 IPR004942 Roadblock/LAMTOR2 domain BJD13_02470 002e22266c1e2d3916c9b56552a3cfcf 138 Pfam PF03203 MerC mercury resistance protein 11 123 2.9E-26 T 17-10-2018 IPR004891 Mercury transport protein MerC GO:0015097|GO:0015694|GO:0016020 BJD13_22640 8b653a41074dae560075269745aab975 230 Pfam PF00565 Staphylococcal nuclease homologue 45 147 4.9E-18 T 17-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 BJD13_22640 8b653a41074dae560075269745aab975 230 SMART SM00318 25 148 3.9E-24 T 17-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 BJD13_22640 8b653a41074dae560075269745aab975 230 Gene3D G3DSA:2.40.50.90 31 157 1.7E-26 T 17-10-2018 IPR035437 SNase-like, OB-fold superfamily BJD13_22640 8b653a41074dae560075269745aab975 230 SUPERFAMILY SSF50199 32 153 3.79E-32 T 17-10-2018 BJD13_02810 1e9107e2c69fedfaa792f26be726e7ff 291 Gene3D G3DSA:1.10.600.10 4 288 1.7E-91 T 17-10-2018 IPR008949 Isoprenoid synthase domain superfamily BJD13_02810 1e9107e2c69fedfaa792f26be726e7ff 291 Pfam PF00348 Polyprenyl synthetase 29 257 2.5E-56 T 17-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 BJD13_02810 1e9107e2c69fedfaa792f26be726e7ff 291 SUPERFAMILY SSF48576 7 277 5.6E-82 T 17-10-2018 IPR008949 Isoprenoid synthase domain superfamily BJD13_02810 1e9107e2c69fedfaa792f26be726e7ff 291 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 210 222 - T 17-10-2018 IPR033749 Polyprenyl synthetase, conserved site BJD13_02810 1e9107e2c69fedfaa792f26be726e7ff 291 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 80 96 - T 17-10-2018 IPR033749 Polyprenyl synthetase, conserved site BJD13_18455 efdc28ec223cb08575dde9191baa28c3 1176 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 17 1175 0.0 T 17-10-2018 IPR017731 Type VI secretion system, IcmF BJD13_18455 efdc28ec223cb08575dde9191baa28c3 1176 SUPERFAMILY SSF52540 107 293 4.14E-14 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_18455 efdc28ec223cb08575dde9191baa28c3 1176 Pfam PF06744 Type VI secretion protein IcmF C-terminal 930 1127 2.8E-43 T 17-10-2018 IPR010623 Type VI secretion system IcmF, C-terminal BJD13_18455 efdc28ec223cb08575dde9191baa28c3 1176 Pfam PF06761 Intracellular multiplication and human macrophage-killing 505 802 5.0E-58 T 17-10-2018 IPR009612 ImcF-related BJD13_18455 efdc28ec223cb08575dde9191baa28c3 1176 Pfam PF14331 ImcF-related N-terminal domain 194 451 5.4E-91 T 17-10-2018 IPR025743 ImcF-related, N-terminal domain BJD13_18455 efdc28ec223cb08575dde9191baa28c3 1176 Gene3D G3DSA:3.40.50.300 121 293 3.5E-8 T 17-10-2018 BJD13_00455 8dc2a3f128aa8efb2641cdf758fedf74 299 Pfam PF12705 PD-(D/E)XK nuclease superfamily 13 280 5.6E-21 T 17-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type BJD13_14070 9e261b8ff17890fe0c6f5b90d3c1c8f4 178 Pfam PF03551 Transcriptional regulator PadR-like family 39 107 1.2E-17 T 17-10-2018 IPR005149 Transcription regulator PadR, N-terminal BJD13_14070 9e261b8ff17890fe0c6f5b90d3c1c8f4 178 SUPERFAMILY SSF46785 34 127 3.29E-22 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_14070 9e261b8ff17890fe0c6f5b90d3c1c8f4 178 Gene3D G3DSA:1.10.10.10 21 131 5.9E-22 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_19730 2e4aeab5f8fa83900881bbfa8530aabd 97 SMART SM00257 45 94 1.3E-7 T 17-10-2018 IPR018392 LysM domain BJD13_19730 2e4aeab5f8fa83900881bbfa8530aabd 97 Gene3D G3DSA:3.10.350.10 44 92 2.3E-15 T 17-10-2018 IPR036779 LysM domain superfamily BJD13_19730 2e4aeab5f8fa83900881bbfa8530aabd 97 SUPERFAMILY SSF54106 46 94 1.96E-7 T 17-10-2018 BJD13_19730 2e4aeab5f8fa83900881bbfa8530aabd 97 Pfam PF01476 LysM domain 46 94 1.9E-13 T 17-10-2018 IPR018392 LysM domain BJD13_20325 03cc0aa3570855a7fd3a2bffc8104915 220 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 1 202 30.718 T 17-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 BJD13_20325 03cc0aa3570855a7fd3a2bffc8104915 220 SUPERFAMILY SSF52218 1 203 2.64E-48 T 17-10-2018 IPR029039 Flavoprotein-like superfamily BJD13_20325 03cc0aa3570855a7fd3a2bffc8104915 220 Gene3D G3DSA:3.40.50.360 1 204 7.7E-57 T 17-10-2018 IPR029039 Flavoprotein-like superfamily BJD13_20325 03cc0aa3570855a7fd3a2bffc8104915 220 Pfam PF02525 Flavodoxin-like fold 1 194 6.1E-44 T 17-10-2018 IPR003680 Flavodoxin-like fold BJD13_17805 26572b4d9f464576e110e30e50f5fd02 654 SUPERFAMILY SSF49785 244 372 4.57E-18 T 17-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD13_17805 26572b4d9f464576e110e30e50f5fd02 654 Gene3D G3DSA:3.40.50.1110 375 548 1.1E-15 T 17-10-2018 IPR036514 SGNH hydrolase superfamily BJD13_17805 26572b4d9f464576e110e30e50f5fd02 654 SUPERFAMILY SSF52266 109 592 2.08E-69 T 17-10-2018 BJD13_17805 26572b4d9f464576e110e30e50f5fd02 654 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 264 373 1.6E-7 T 17-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 BJD13_17805 26572b4d9f464576e110e30e50f5fd02 654 Gene3D G3DSA:3.40.50.1110 110 232 1.6E-5 T 17-10-2018 IPR036514 SGNH hydrolase superfamily BJD13_17805 26572b4d9f464576e110e30e50f5fd02 654 Gene3D G3DSA:2.60.120.260 237 374 3.2E-16 T 17-10-2018 IPR008979 Galactose-binding-like domain superfamily BJD13_17805 26572b4d9f464576e110e30e50f5fd02 654 Pfam PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase 111 212 2.1E-6 T 17-10-2018 IPR005181 Sialate O-acetylesterase domain BJD13_17805 26572b4d9f464576e110e30e50f5fd02 654 Pfam PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase 396 538 3.0E-12 T 17-10-2018 IPR005181 Sialate O-acetylesterase domain BJD13_14945 99018f9719832b1e7426bccfc6306abc 156 Gene3D G3DSA:3.30.1460.10 2 136 3.0E-7 T 17-10-2018 BJD13_14945 99018f9719832b1e7426bccfc6306abc 156 SUPERFAMILY SSF69635 50 133 5.76E-7 T 17-10-2018 BJD13_14945 99018f9719832b1e7426bccfc6306abc 156 Pfam PF05932 Tir chaperone protein (CesT) family 9 131 4.4E-7 T 17-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 BJD13_04985 118749d37faec295dde38fefd505142d 261 SUPERFAMILY SSF51735 12 257 7.65E-63 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_04985 118749d37faec295dde38fefd505142d 261 Gene3D G3DSA:3.40.50.720 4 260 1.2E-66 T 17-10-2018 BJD13_04985 118749d37faec295dde38fefd505142d 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 2.7E-6 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_04985 118749d37faec295dde38fefd505142d 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 2.7E-6 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_04985 118749d37faec295dde38fefd505142d 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 2.7E-6 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_04985 118749d37faec295dde38fefd505142d 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 21 256 1.6E-42 T 17-10-2018 BJD13_04985 118749d37faec295dde38fefd505142d 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 17-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BJD13_04985 118749d37faec295dde38fefd505142d 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 1.9E-36 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_04985 118749d37faec295dde38fefd505142d 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.9E-36 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_04985 118749d37faec295dde38fefd505142d 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.9E-36 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_04985 118749d37faec295dde38fefd505142d 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 1.9E-36 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_04985 118749d37faec295dde38fefd505142d 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.9E-36 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_04985 118749d37faec295dde38fefd505142d 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 1.9E-36 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_06225 614431eb9ecb15c049f6285566430cf2 286 Gene3D G3DSA:1.10.260.40 8 112 9.2E-22 T 17-10-2018 BJD13_06225 614431eb9ecb15c049f6285566430cf2 286 Pfam PF13413 Helix-turn-helix domain 20 79 1.2E-21 T 17-10-2018 BJD13_06225 614431eb9ecb15c049f6285566430cf2 286 Pfam PF13464 Domain of unknown function (DUF4115) 202 274 3.2E-17 T 17-10-2018 IPR025194 Domain of unknown function DUF4115 BJD13_15560 c1ba85c425f21c0285d26d8cf4fc08a5 119 PRINTS PR00189 Transthyretin signature 97 119 4.4E-9 T 17-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 BJD13_15560 c1ba85c425f21c0285d26d8cf4fc08a5 119 PRINTS PR00189 Transthyretin signature 12 32 4.4E-9 T 17-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 BJD13_15560 c1ba85c425f21c0285d26d8cf4fc08a5 119 ProSitePatterns PS00769 Transthyretin signature 2. 102 114 - T 17-10-2018 IPR023419 Transthyretin, conserved site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 BJD13_15560 c1ba85c425f21c0285d26d8cf4fc08a5 119 SUPERFAMILY SSF49472 8 119 2.22E-38 T 17-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 BJD13_15560 c1ba85c425f21c0285d26d8cf4fc08a5 119 Gene3D G3DSA:2.60.40.180 4 119 2.3E-36 T 17-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 BJD13_15560 c1ba85c425f21c0285d26d8cf4fc08a5 119 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 11 119 1.6E-33 T 17-10-2018 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 BJD13_15560 c1ba85c425f21c0285d26d8cf4fc08a5 119 Pfam PF00576 HIUase/Transthyretin family 13 118 4.9E-32 T 17-10-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase domain Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 BJD13_24195 8d018b8ca30c4486402c2b659fd19e41 835 TIGRFAM TIGR04346 DotA_TraY: conjugal transfer/type IV secretion protein DotA/TraY 17 704 1.4E-123 T 17-10-2018 IPR027628 Conjugal transfer/type IV secretion protein DotA/TraY BJD13_06570 537a236f28fc314362d52f4f8b3ffb06 574 PRINTS PR01009 Flagellar M-ring protein signature 363 387 1.3E-32 T 17-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BJD13_06570 537a236f28fc314362d52f4f8b3ffb06 574 PRINTS PR01009 Flagellar M-ring protein signature 206 224 1.3E-32 T 17-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BJD13_06570 537a236f28fc314362d52f4f8b3ffb06 574 PRINTS PR01009 Flagellar M-ring protein signature 163 177 1.3E-32 T 17-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BJD13_06570 537a236f28fc314362d52f4f8b3ffb06 574 PRINTS PR01009 Flagellar M-ring protein signature 276 294 1.3E-32 T 17-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BJD13_06570 537a236f28fc314362d52f4f8b3ffb06 574 PRINTS PR01009 Flagellar M-ring protein signature 131 149 1.3E-32 T 17-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BJD13_06570 537a236f28fc314362d52f4f8b3ffb06 574 Gene3D G3DSA:3.30.300.30 132 235 1.3E-13 T 17-10-2018 BJD13_06570 537a236f28fc314362d52f4f8b3ffb06 574 PIRSF PIRSF004862 6 574 4.6E-135 T 17-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BJD13_06570 537a236f28fc314362d52f4f8b3ffb06 574 Pfam PF08345 Flagellar M-ring protein C-terminal 263 439 1.1E-45 T 17-10-2018 IPR013556 Flagellar M-ring C-terminal BJD13_06570 537a236f28fc314362d52f4f8b3ffb06 574 Pfam PF01514 Secretory protein of YscJ/FliF family 39 230 6.5E-66 T 17-10-2018 IPR006182 Secretory protein YscJ/FliF BJD13_06570 537a236f28fc314362d52f4f8b3ffb06 574 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 12 573 3.2E-82 T 17-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BJD13_07675 b0b660ff6756a45ee6afeb29131ca1ad 305 Pfam PF02649 Type I GTP cyclohydrolase folE2 5 291 1.9E-69 T 17-10-2018 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 BJD13_07675 b0b660ff6756a45ee6afeb29131ca1ad 305 Hamap MF_01527_B GTP cyclohydrolase FolE2 [folE2]. 5 296 33.457 T 17-10-2018 IPR022838 GTP cyclohydrolase FolE2 GO:0003934|GO:0035998 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 BJD13_07845 623c79678c9168b265c363f4abf67d83 330 Pfam PF00581 Rhodanese-like domain 216 306 3.8E-6 T 17-10-2018 IPR001763 Rhodanese-like domain BJD13_07845 623c79678c9168b265c363f4abf67d83 330 Gene3D G3DSA:3.40.250.10 206 314 1.3E-17 T 17-10-2018 IPR036873 Rhodanese-like domain superfamily BJD13_07845 623c79678c9168b265c363f4abf67d83 330 Pfam PF09335 SNARE associated Golgi protein 27 157 6.1E-14 T 17-10-2018 IPR032816 SNARE associated Golgi protein BJD13_07845 623c79678c9168b265c363f4abf67d83 330 SUPERFAMILY SSF52821 207 315 1.44E-21 T 17-10-2018 IPR036873 Rhodanese-like domain superfamily BJD13_09755 571501803fdb72ec68cadcb46f0df669 151 Pfam PF09537 Domain of unknown function (DUF2383) 7 114 2.2E-30 T 17-10-2018 IPR019052 Domain of unknown function DUF2383 BJD13_09755 571501803fdb72ec68cadcb46f0df669 151 Gene3D G3DSA:1.20.1260.10 2 147 1.4E-24 T 17-10-2018 IPR012347 Ferritin-like BJD13_09755 571501803fdb72ec68cadcb46f0df669 151 TIGRFAM TIGR02284 TIGR02284: conserved hypothetical protein 7 144 2.6E-55 T 17-10-2018 IPR011971 Conserved hypothetical protein CHP02284 BJD13_06620 20f1de969980677eb487ea4945744770 281 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 178 190 8.7E-17 T 17-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BJD13_06620 20f1de969980677eb487ea4945744770 281 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 268 278 8.7E-17 T 17-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BJD13_06620 20f1de969980677eb487ea4945744770 281 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 200 212 8.7E-17 T 17-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BJD13_06620 20f1de969980677eb487ea4945744770 281 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 78 87 8.7E-17 T 17-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BJD13_06620 20f1de969980677eb487ea4945744770 281 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 138 150 8.7E-17 T 17-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BJD13_06620 20f1de969980677eb487ea4945744770 281 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 150 164 8.7E-17 T 17-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BJD13_06620 20f1de969980677eb487ea4945744770 281 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 80 99 9.3E-61 T 17-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BJD13_06620 20f1de969980677eb487ea4945744770 281 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 207 227 9.3E-61 T 17-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BJD13_06620 20f1de969980677eb487ea4945744770 281 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 99 119 9.3E-61 T 17-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BJD13_06620 20f1de969980677eb487ea4945744770 281 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 119 138 9.3E-61 T 17-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BJD13_06620 20f1de969980677eb487ea4945744770 281 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 228 249 9.3E-61 T 17-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BJD13_06620 20f1de969980677eb487ea4945744770 281 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 252 277 9.3E-61 T 17-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BJD13_06620 20f1de969980677eb487ea4945744770 281 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 255 267 - T 17-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BJD13_06620 20f1de969980677eb487ea4945744770 281 Pfam PF00813 FliP family 82 274 3.4E-72 T 17-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BJD13_06620 20f1de969980677eb487ea4945744770 281 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 207 222 - T 17-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BJD13_06620 20f1de969980677eb487ea4945744770 281 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 82 278 1.7E-76 T 17-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BJD13_17650 3b6b2c0e8af8b25bad7cd3928f3c8615 117 Pfam PF06877 Regulator of ribonuclease activity B 11 109 2.2E-19 T 17-10-2018 IPR009671 Regulator of ribonuclease activity B domain BJD13_17650 3b6b2c0e8af8b25bad7cd3928f3c8615 117 SUPERFAMILY SSF89946 7 110 3.79E-17 T 17-10-2018 IPR036701 RraB-like superfamily BJD13_04480 1362a1e7d3f8ea8aa89bacf7adeaaaca 141 Pfam PF01337 Barstar (barnase inhibitor) 43 125 2.2E-23 T 17-10-2018 IPR000468 Barstar (barnase inhibitor) BJD13_04480 1362a1e7d3f8ea8aa89bacf7adeaaaca 141 Gene3D G3DSA:3.30.370.10 38 129 7.8E-9 T 17-10-2018 IPR035905 Barstar-like superfamily BJD13_04480 1362a1e7d3f8ea8aa89bacf7adeaaaca 141 SUPERFAMILY SSF52038 40 130 2.88E-23 T 17-10-2018 IPR035905 Barstar-like superfamily BJD13_00305 b22fe1141e67cb582ad98e92e4648d66 86 Gene3D G3DSA:3.30.70.100 1 60 2.2E-17 T 17-10-2018 BJD13_00305 b22fe1141e67cb582ad98e92e4648d66 86 SUPERFAMILY SSF55008 3 59 3.93E-14 T 17-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 BJD13_00305 b22fe1141e67cb582ad98e92e4648d66 86 Pfam PF00403 Heavy-metal-associated domain 5 59 2.3E-9 T 17-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 BJD13_00305 b22fe1141e67cb582ad98e92e4648d66 86 ProSitePatterns PS01047 Heavy-metal-associated domain. 5 34 - T 17-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 BJD13_11530 c85d96b0c1fbcc94c0d8a69825865b34 253 PIRSF PIRSF009160 1 253 4.7E-101 T 17-10-2018 IPR010539 Protein of unknown function UCP009160 BJD13_11530 c85d96b0c1fbcc94c0d8a69825865b34 253 Pfam PF12811 Bax inhibitor 1 like 24 251 7.5E-79 T 17-10-2018 IPR010539 Protein of unknown function UCP009160 BJD13_07060 0304f783d7fc76df408ce1e4741b057e 400 SUPERFAMILY SSF53383 3 390 1.83E-106 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD13_07060 0304f783d7fc76df408ce1e4741b057e 400 Pfam PF00155 Aminotransferase class I and II 45 381 1.1E-31 T 17-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BJD13_07060 0304f783d7fc76df408ce1e4741b057e 400 Gene3D G3DSA:3.40.640.10 66 282 9.3E-141 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD13_07060 0304f783d7fc76df408ce1e4741b057e 400 Gene3D G3DSA:3.90.1150.10 19 387 9.3E-141 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD13_20785 4e9bcd839f230869434037f31caa1eeb 275 Gene3D G3DSA:3.40.50.1820 10 265 6.9E-30 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_20785 4e9bcd839f230869434037f31caa1eeb 275 SUPERFAMILY SSF53474 15 267 1.09E-23 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_20785 4e9bcd839f230869434037f31caa1eeb 275 Pfam PF12146 Serine aminopeptidase, S33 27 153 1.4E-8 T 17-10-2018 IPR022742 Serine aminopeptidase, S33 BJD13_13230 454b26428bcb5490f1aabf9842e4fd65 885 Gene3D G3DSA:2.40.170.20 301 885 7.1E-33 T 17-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BJD13_13230 454b26428bcb5490f1aabf9842e4fd65 885 SUPERFAMILY SSF56935 55 885 1.68E-72 T 17-10-2018 BJD13_13230 454b26428bcb5490f1aabf9842e4fd65 885 Pfam PF07715 TonB-dependent Receptor Plug Domain 71 169 6.6E-10 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_13230 454b26428bcb5490f1aabf9842e4fd65 885 Pfam PF00593 TonB dependent receptor 394 883 4.9E-24 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_13230 454b26428bcb5490f1aabf9842e4fd65 885 Gene3D G3DSA:2.170.130.10 56 172 7.7E-10 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_03620 d7d07c3a1f51b35959c2460d2e198713 332 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 111 191 1.1E-20 T 17-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 BJD13_03620 d7d07c3a1f51b35959c2460d2e198713 332 Gene3D G3DSA:3.40.47.10 177 332 9.6E-37 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 BJD13_03620 d7d07c3a1f51b35959c2460d2e198713 332 SUPERFAMILY SSF53901 7 332 2.47E-49 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 BJD13_03620 d7d07c3a1f51b35959c2460d2e198713 332 Gene3D G3DSA:3.40.47.10 1 175 1.4E-54 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 BJD13_03620 d7d07c3a1f51b35959c2460d2e198713 332 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 243 332 1.6E-23 T 17-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 BJD13_11830 0dacc20df937a2d529e099010a9daee5 63 Pfam PF00327 Ribosomal protein L30p/L7e 10 59 1.5E-12 T 17-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain BJD13_11830 0dacc20df937a2d529e099010a9daee5 63 PIRSF PIRSF002211 1 63 7.9E-24 T 17-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_11830 0dacc20df937a2d529e099010a9daee5 63 SUPERFAMILY SSF55129 7 63 7.06E-17 T 17-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily BJD13_11830 0dacc20df937a2d529e099010a9daee5 63 Gene3D G3DSA:3.30.1390.20 5 63 2.0E-19 T 17-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily BJD13_11830 0dacc20df937a2d529e099010a9daee5 63 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 9 63 5.2E-19 T 17-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_11830 0dacc20df937a2d529e099010a9daee5 63 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 6 63 18.681 T 17-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_05355 cf05d3e6ebf4dc6a4085f377bd572ff4 244 SUPERFAMILY SSF52540 18 240 4.69E-65 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_05355 cf05d3e6ebf4dc6a4085f377bd572ff4 244 Gene3D G3DSA:3.40.50.300 16 243 1.7E-62 T 17-10-2018 BJD13_05355 cf05d3e6ebf4dc6a4085f377bd572ff4 244 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 18 237 2.2E-102 T 17-10-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0016020|GO:0044873 BJD13_05355 cf05d3e6ebf4dc6a4085f377bd572ff4 244 SMART SM00382 47 235 1.0E-14 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_05355 cf05d3e6ebf4dc6a4085f377bd572ff4 244 Pfam PF00005 ABC transporter 39 186 1.9E-29 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD13_06960 575291907b29460392dbc74ebc43337c 922 ProSitePatterns PS00450 Aconitase family signature 1. 450 466 - T 17-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 BJD13_06960 575291907b29460392dbc74ebc43337c 922 Pfam PF00694 Aconitase C-terminal domain 715 846 6.7E-45 T 17-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 BJD13_06960 575291907b29460392dbc74ebc43337c 922 Gene3D G3DSA:3.20.19.10 676 918 2.6E-102 T 17-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 BJD13_06960 575291907b29460392dbc74ebc43337c 922 Gene3D G3DSA:1.10.1440.20 614 675 2.5E-23 T 17-10-2018 BJD13_06960 575291907b29460392dbc74ebc43337c 922 SUPERFAMILY SSF52016 654 916 4.51E-84 T 17-10-2018 BJD13_06960 575291907b29460392dbc74ebc43337c 922 PRINTS PR00415 Aconitase family signature 215 230 5.5E-41 T 17-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BJD13_06960 575291907b29460392dbc74ebc43337c 922 PRINTS PR00415 Aconitase family signature 291 304 5.5E-41 T 17-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BJD13_06960 575291907b29460392dbc74ebc43337c 922 PRINTS PR00415 Aconitase family signature 371 385 5.5E-41 T 17-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BJD13_06960 575291907b29460392dbc74ebc43337c 922 PRINTS PR00415 Aconitase family signature 454 465 5.5E-41 T 17-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BJD13_06960 575291907b29460392dbc74ebc43337c 922 PRINTS PR00415 Aconitase family signature 201 214 5.5E-41 T 17-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BJD13_06960 575291907b29460392dbc74ebc43337c 922 PRINTS PR00415 Aconitase family signature 144 157 5.5E-41 T 17-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BJD13_06960 575291907b29460392dbc74ebc43337c 922 PRINTS PR00415 Aconitase family signature 277 290 5.5E-41 T 17-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BJD13_06960 575291907b29460392dbc74ebc43337c 922 PRINTS PR00415 Aconitase family signature 168 176 5.5E-41 T 17-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BJD13_06960 575291907b29460392dbc74ebc43337c 922 PRINTS PR00415 Aconitase family signature 516 529 5.5E-41 T 17-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BJD13_06960 575291907b29460392dbc74ebc43337c 922 Gene3D G3DSA:3.30.499.10 372 613 4.1E-98 T 17-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 BJD13_06960 575291907b29460392dbc74ebc43337c 922 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 16 916 0.0 T 17-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 BJD13_06960 575291907b29460392dbc74ebc43337c 922 ProSitePatterns PS01244 Aconitase family signature 2. 516 529 - T 17-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 BJD13_06960 575291907b29460392dbc74ebc43337c 922 Pfam PF00330 Aconitase family (aconitate hydratase) 70 585 6.3E-181 T 17-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BJD13_06960 575291907b29460392dbc74ebc43337c 922 SUPERFAMILY SSF53732 3 649 7.46E-224 T 17-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 BJD13_06960 575291907b29460392dbc74ebc43337c 922 Gene3D G3DSA:3.30.499.20 5 371 1.2E-158 T 17-10-2018 BJD13_02000 dd9caac66e86135b52f2b04bf8a89bda 213 Gene3D G3DSA:2.70.70.10 53 210 4.5E-40 T 17-10-2018 IPR011055 Duplicated hybrid motif BJD13_02000 dd9caac66e86135b52f2b04bf8a89bda 213 SUPERFAMILY SSF51261 83 204 1.2E-30 T 17-10-2018 IPR011055 Duplicated hybrid motif BJD13_02000 dd9caac66e86135b52f2b04bf8a89bda 213 Pfam PF01551 Peptidase family M23 102 200 9.7E-21 T 17-10-2018 IPR016047 Peptidase M23 BJD13_03660 c0274773e8e71cb6e2bb0607f7f2ed46 597 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 468 589 3.7E-29 T 17-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain BJD13_03660 c0274773e8e71cb6e2bb0607f7f2ed46 597 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 284 452 2.5E-23 T 17-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 BJD13_03660 c0274773e8e71cb6e2bb0607f7f2ed46 597 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 40 158 1.7E-5 T 17-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 BJD13_03660 c0274773e8e71cb6e2bb0607f7f2ed46 597 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 34 1.6E-7 T 17-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria BJD13_03660 c0274773e8e71cb6e2bb0607f7f2ed46 597 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 164 272 7.3E-15 T 17-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 BJD13_03660 c0274773e8e71cb6e2bb0607f7f2ed46 597 SUPERFAMILY SSF47203 288 459 4.03E-47 T 17-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 BJD13_03660 c0274773e8e71cb6e2bb0607f7f2ed46 597 Gene3D G3DSA:2.40.110.10 162 288 2.3E-25 T 17-10-2018 BJD13_03660 c0274773e8e71cb6e2bb0607f7f2ed46 597 SUPERFAMILY SSF56645 38 280 3.66E-52 T 17-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 BJD13_03660 c0274773e8e71cb6e2bb0607f7f2ed46 597 Gene3D G3DSA:1.10.540.10 34 160 3.8E-11 T 17-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 BJD13_03660 c0274773e8e71cb6e2bb0607f7f2ed46 597 Gene3D G3DSA:1.20.140.10 289 456 1.7E-47 T 17-10-2018 BJD13_04620 51155bc81a4d25859745e3a7b3ef4adb 416 Pfam PF05977 Transmembrane secretion effector 20 410 5.9E-32 T 17-10-2018 IPR010290 Transmembrane secretion effector BJD13_04620 51155bc81a4d25859745e3a7b3ef4adb 416 SUPERFAMILY SSF103473 22 414 4.71E-36 T 17-10-2018 IPR036259 MFS transporter superfamily BJD13_04620 51155bc81a4d25859745e3a7b3ef4adb 416 Gene3D G3DSA:1.20.1250.20 20 402 3.6E-30 T 17-10-2018 BJD13_12615 71618316979b5c73c21a2d823d616b17 432 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 13 86 3.9E-25 T 17-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 BJD13_12615 71618316979b5c73c21a2d823d616b17 432 Pfam PF07670 Nucleoside recognition 98 197 2.0E-7 T 17-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 BJD13_12615 71618316979b5c73c21a2d823d616b17 432 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 209 428 5.2E-75 T 17-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 BJD13_01635 cca682f0380c83e0272a0242317b4d86 505 PIRSF PIRSF011396 1 494 6.5E-183 T 17-10-2018 IPR033856 Flavin-dependent tryptophan halogenase BJD13_01635 cca682f0380c83e0272a0242317b4d86 505 Pfam PF04820 Tryptophan halogenase 8 457 8.8E-193 T 17-10-2018 IPR006905 Flavin-dependent halogenase BJD13_01635 cca682f0380c83e0272a0242317b4d86 505 SUPERFAMILY SSF51905 7 405 2.87E-27 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_01635 cca682f0380c83e0272a0242317b4d86 505 Gene3D G3DSA:3.50.50.60 2 491 5.8E-175 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_07165 8e79f6b58b0a2afa40a04019a68aeeee 358 SUPERFAMILY SSF52129 128 237 4.87E-6 T 17-10-2018 IPR029030 Caspase-like domain superfamily BJD13_07165 8e79f6b58b0a2afa40a04019a68aeeee 358 Pfam PF01650 Peptidase C13 family 74 284 3.2E-49 T 17-10-2018 IPR001096 Peptidase C13, legumain GO:0006508|GO:0008233 BJD13_03070 9fc11b5de8c7704b99a814ab7ce68802 295 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 285 37.979 T 17-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BJD13_03070 9fc11b5de8c7704b99a814ab7ce68802 295 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 255 264 4.9E-42 T 17-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BJD13_03070 9fc11b5de8c7704b99a814ab7ce68802 295 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 204 221 4.9E-42 T 17-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BJD13_03070 9fc11b5de8c7704b99a814ab7ce68802 295 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 133 147 4.9E-42 T 17-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BJD13_03070 9fc11b5de8c7704b99a814ab7ce68802 295 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 233 244 4.9E-42 T 17-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BJD13_03070 9fc11b5de8c7704b99a814ab7ce68802 295 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 167 185 4.9E-42 T 17-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BJD13_03070 9fc11b5de8c7704b99a814ab7ce68802 295 Pfam PF01039 Carboxyl transferase domain 110 243 5.2E-17 T 17-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 BJD13_03070 9fc11b5de8c7704b99a814ab7ce68802 295 Gene3D G3DSA:3.90.226.10 28 291 2.0E-85 T 17-10-2018 BJD13_03070 9fc11b5de8c7704b99a814ab7ce68802 295 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 287 2.0E-126 T 17-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BJD13_03070 9fc11b5de8c7704b99a814ab7ce68802 295 SUPERFAMILY SSF52096 28 288 1.18E-85 T 17-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BJD13_10180 d6a324412dd10e1d2d1fc07f56eebc6a 265 Pfam PF01063 Amino-transferase class IV 25 229 1.2E-32 T 17-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 BJD13_10180 d6a324412dd10e1d2d1fc07f56eebc6a 265 Gene3D G3DSA:3.30.470.10 6 112 3.3E-9 T 17-10-2018 BJD13_10180 d6a324412dd10e1d2d1fc07f56eebc6a 265 Gene3D G3DSA:3.20.10.10 113 263 5.4E-17 T 17-10-2018 BJD13_10180 d6a324412dd10e1d2d1fc07f56eebc6a 265 SUPERFAMILY SSF56752 11 244 5.36E-38 T 17-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 BJD13_01575 b382625e0bf7b4fa03147fab4798cb63 223 Pfam PF10679 Protein of unknown function (DUF2491) 3 220 2.8E-66 T 17-10-2018 IPR019621 Protein of unknown function DUF2491 BJD13_02520 ae5e7c67f188620276c0276ddb53c64e 133 Gene3D G3DSA:1.20.120.550 5 133 3.7E-18 T 17-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily BJD13_02520 ae5e7c67f188620276c0276ddb53c64e 133 SUPERFAMILY SSF161084 6 131 7.46E-27 T 17-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily BJD13_02520 ae5e7c67f188620276c0276ddb53c64e 133 Pfam PF01124 MAPEG family 10 126 7.6E-21 T 17-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein BJD13_08120 df6e24b1c40dfe9f161b01d627578df9 232 SUPERFAMILY SSF53335 15 204 2.56E-32 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_08120 df6e24b1c40dfe9f161b01d627578df9 232 Gene3D G3DSA:3.40.50.150 29 230 1.7E-35 T 17-10-2018 BJD13_08120 df6e24b1c40dfe9f161b01d627578df9 232 Pfam PF08241 Methyltransferase domain 50 147 6.9E-19 T 17-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 BJD13_05880 0a04827621c60fbf5820c58e51a5bd7c 438 Pfam PF00691 OmpA family 329 418 8.3E-14 T 17-10-2018 IPR006665 OmpA-like domain BJD13_05880 0a04827621c60fbf5820c58e51a5bd7c 438 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 57 265 1.4E-69 T 17-10-2018 IPR017732 Type IV / VI secretion system, DotU BJD13_05880 0a04827621c60fbf5820c58e51a5bd7c 438 TIGRFAM TIGR03350 type_VI_ompA: type VI secretion system peptidoglycan-associated domain 297 433 4.0E-46 T 17-10-2018 IPR017733 Type VI secretion system peptidoglycan-associated domain BJD13_05880 0a04827621c60fbf5820c58e51a5bd7c 438 Gene3D G3DSA:3.30.1330.60 287 438 7.1E-36 T 17-10-2018 IPR036737 OmpA-like domain superfamily BJD13_05880 0a04827621c60fbf5820c58e51a5bd7c 438 Gene3D G3DSA:1.25.40.590 55 212 5.4E-54 T 17-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily BJD13_05880 0a04827621c60fbf5820c58e51a5bd7c 438 Pfam PF09850 Type VI secretion system protein DotU 60 259 1.5E-64 T 17-10-2018 IPR017732 Type IV / VI secretion system, DotU BJD13_05880 0a04827621c60fbf5820c58e51a5bd7c 438 SUPERFAMILY SSF103088 321 436 1.26E-25 T 17-10-2018 IPR036737 OmpA-like domain superfamily BJD13_02490 aeaf2aa001e92766291d9b62d4a835e5 432 SUPERFAMILY SSF53649 39 406 2.91E-93 T 17-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 BJD13_02490 aeaf2aa001e92766291d9b62d4a835e5 432 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 48 366 1.1E-82 T 17-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 BJD13_02490 aeaf2aa001e92766291d9b62d4a835e5 432 Gene3D G3DSA:3.40.720.10 48 414 1.4E-144 T 17-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 BJD13_02490 aeaf2aa001e92766291d9b62d4a835e5 432 Gene3D G3DSA:3.30.1360.180 261 363 1.4E-144 T 17-10-2018 BJD13_04740 730551ed2d41c210c5af97495adf7f5f 204 Pfam PF06961 Protein of unknown function (DUF1294) 117 171 1.3E-23 T 17-10-2018 IPR010718 Protein of unknown function DUF1294 BJD13_04740 730551ed2d41c210c5af97495adf7f5f 204 Pfam PF00313 'Cold-shock' DNA-binding domain 5 66 2.7E-9 T 17-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BJD13_04740 730551ed2d41c210c5af97495adf7f5f 204 SUPERFAMILY SSF50249 1 67 5.14E-13 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD13_04740 730551ed2d41c210c5af97495adf7f5f 204 Gene3D G3DSA:2.40.50.140 1 82 2.6E-16 T 17-10-2018 BJD13_04740 730551ed2d41c210c5af97495adf7f5f 204 SMART SM00357 4 68 9.9E-6 T 17-10-2018 IPR011129 Cold shock domain GO:0003676 BJD13_18000 7d475bdddaf5b198b8c7f4d4a72367aa 194 SUPERFAMILY SSF52540 13 178 2.25E-28 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_18000 7d475bdddaf5b198b8c7f4d4a72367aa 194 Pfam PF13671 AAA domain 17 149 4.5E-13 T 17-10-2018 BJD13_18000 7d475bdddaf5b198b8c7f4d4a72367aa 194 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 17 176 1.0E-44 T 17-10-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 BJD13_18000 7d475bdddaf5b198b8c7f4d4a72367aa 194 Gene3D G3DSA:3.40.50.300 1 190 9.5E-59 T 17-10-2018 BJD13_00870 f4733bd4e7833510581cd65ee15a7413 291 Gene3D G3DSA:1.10.10.2830 126 242 3.2E-7 T 17-10-2018 BJD13_00870 f4733bd4e7833510581cd65ee15a7413 291 SUPERFAMILY SSF110849 59 167 1.92E-8 T 17-10-2018 IPR036086 ParB/Sulfiredoxin superfamily BJD13_00870 f4733bd4e7833510581cd65ee15a7413 291 SUPERFAMILY SSF109709 141 223 1.11E-9 T 17-10-2018 BJD13_00870 f4733bd4e7833510581cd65ee15a7413 291 Pfam PF02195 ParB-like nuclease domain 57 133 3.6E-6 T 17-10-2018 IPR003115 ParB/Sulfiredoxin BJD13_17030 e6224448ce4374e8e015df8a2726a296 365 SUPERFAMILY SSF51695 31 359 3.4E-72 T 17-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 BJD13_17030 e6224448ce4374e8e015df8a2726a296 365 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 36 353 7.4E-49 T 17-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 BJD13_17030 e6224448ce4374e8e015df8a2726a296 365 Gene3D G3DSA:3.20.20.190 30 360 3.0E-108 T 17-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 BJD13_03600 50639311c38452f0d7194cb0826c3042 264 Pfam PF04230 Polysaccharide pyruvyl transferase 75 209 3.1E-15 T 17-10-2018 IPR007345 Polysaccharide pyruvyl transferase BJD13_21265 008c8a11f1b569dacd5410778e7fe44f 214 SUPERFAMILY SSF159594 34 205 6.54E-42 T 17-10-2018 BJD13_21265 008c8a11f1b569dacd5410778e7fe44f 214 Gene3D G3DSA:3.40.50.10610 23 214 2.6E-70 T 17-10-2018 BJD13_21265 008c8a11f1b569dacd5410778e7fe44f 214 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 35 195 1.3E-35 T 17-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component BJD13_12720 26b4ec8a8f3a7c73f50a1d6bbeec3ad5 181 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 4 181 9.2E-55 T 17-10-2018 IPR018636 Protein of unknown function DUF2058 BJD13_13425 03d4598b834ca7313674be3c4c6edeb1 348 SUPERFAMILY SSF53067 9 153 3.82E-38 T 17-10-2018 BJD13_13425 03d4598b834ca7313674be3c4c6edeb1 348 Gene3D G3DSA:3.30.420.40 159 322 9.3E-132 T 17-10-2018 BJD13_13425 03d4598b834ca7313674be3c4c6edeb1 348 Gene3D G3DSA:3.30.420.40 14 332 9.3E-132 T 17-10-2018 BJD13_13425 03d4598b834ca7313674be3c4c6edeb1 348 Gene3D G3DSA:3.90.640.10 191 264 9.3E-132 T 17-10-2018 BJD13_13425 03d4598b834ca7313674be3c4c6edeb1 348 SMART SM00268 10 345 0.0028 T 17-10-2018 IPR004000 Actin family BJD13_13425 03d4598b834ca7313674be3c4c6edeb1 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 73 96 5.6E-62 T 17-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BJD13_13425 03d4598b834ca7313674be3c4c6edeb1 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 305 331 5.6E-62 T 17-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BJD13_13425 03d4598b834ca7313674be3c4c6edeb1 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 192 212 5.6E-62 T 17-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BJD13_13425 03d4598b834ca7313674be3c4c6edeb1 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 53 71 5.6E-62 T 17-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BJD13_13425 03d4598b834ca7313674be3c4c6edeb1 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 137 156 5.6E-62 T 17-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BJD13_13425 03d4598b834ca7313674be3c4c6edeb1 348 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 340 2.9E-161 T 17-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BJD13_13425 03d4598b834ca7313674be3c4c6edeb1 348 SUPERFAMILY SSF53067 155 340 2.34E-48 T 17-10-2018 BJD13_13425 03d4598b834ca7313674be3c4c6edeb1 348 Pfam PF06723 MreB/Mbl protein 11 339 9.6E-152 T 17-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BJD13_14525 ce55a7659f2ed4a65cb94b0c6a575101 308 ProSitePatterns PS01058 SAICAR synthetase signature 2. 216 224 - T 17-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BJD13_14525 ce55a7659f2ed4a65cb94b0c6a575101 308 Gene3D G3DSA:3.30.200.20 3 115 8.3E-30 T 17-10-2018 BJD13_14525 ce55a7659f2ed4a65cb94b0c6a575101 308 SUPERFAMILY SSF56104 5 304 1.11E-100 T 17-10-2018 BJD13_14525 ce55a7659f2ed4a65cb94b0c6a575101 308 Pfam PF01259 SAICAR synthetase 17 279 1.1E-98 T 17-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BJD13_14525 ce55a7659f2ed4a65cb94b0c6a575101 308 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 18 303 5.7E-75 T 17-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 BJD13_14525 ce55a7659f2ed4a65cb94b0c6a575101 308 ProSitePatterns PS01057 SAICAR synthetase signature 1. 117 131 - T 17-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BJD13_14525 ce55a7659f2ed4a65cb94b0c6a575101 308 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 13 304 28.512 T 17-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BJD13_14525 ce55a7659f2ed4a65cb94b0c6a575101 308 Gene3D G3DSA:3.30.470.20 117 260 7.9E-60 T 17-10-2018 BJD13_18620 362bf4e6298b3acdd302d95588dcd39e 540 Pfam PF13450 NAD(P)-binding Rossmann-like domain 10 65 5.3E-6 T 17-10-2018 BJD13_18620 362bf4e6298b3acdd302d95588dcd39e 540 SUPERFAMILY SSF51905 5 390 1.24E-31 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_18620 362bf4e6298b3acdd302d95588dcd39e 540 Gene3D G3DSA:3.50.50.60 2 399 2.6E-88 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_18620 362bf4e6298b3acdd302d95588dcd39e 540 Pfam PF04820 Tryptophan halogenase 108 348 8.9E-10 T 17-10-2018 IPR006905 Flavin-dependent halogenase BJD13_08650 96ce4d0b53d75eb3a7cacac0271be55d 168 Gene3D G3DSA:3.40.630.30 1 166 1.2E-41 T 17-10-2018 BJD13_08650 96ce4d0b53d75eb3a7cacac0271be55d 168 Pfam PF00583 Acetyltransferase (GNAT) family 41 128 8.7E-11 T 17-10-2018 IPR000182 GNAT domain BJD13_08650 96ce4d0b53d75eb3a7cacac0271be55d 168 SUPERFAMILY SSF55729 3 156 1.17E-24 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD13_18050 4fd32b2d38e44320e0b3d3aff2c08b86 119 Pfam PF05336 L-rhamnose mutarotase 3 110 2.5E-26 T 17-10-2018 IPR008000 Rhamnose/fucose mutarotase GO:0005737|GO:0016857 BJD13_18050 4fd32b2d38e44320e0b3d3aff2c08b86 119 Gene3D G3DSA:3.30.70.100 1 99 5.1E-12 T 17-10-2018 BJD13_18050 4fd32b2d38e44320e0b3d3aff2c08b86 119 SUPERFAMILY SSF54909 1 111 1.77E-24 T 17-10-2018 IPR011008 Dimeric alpha-beta barrel BJD13_19910 bec8c17a903331733de78eb90ab74c1f 157 Pfam PF04361 Protein of unknown function (DUF494) 5 157 3.6E-55 T 17-10-2018 IPR007456 Smg BJD13_19910 bec8c17a903331733de78eb90ab74c1f 157 Hamap MF_00598 Protein Smg [smg]. 5 157 30.746 T 17-10-2018 IPR007456 Smg BJD13_16195 54890bb73345d44cac8eed2c96d7a251 732 Gene3D G3DSA:2.170.130.10 43 169 5.9E-33 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_16195 54890bb73345d44cac8eed2c96d7a251 732 Pfam PF07715 TonB-dependent Receptor Plug Domain 64 158 5.7E-12 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_16195 54890bb73345d44cac8eed2c96d7a251 732 Gene3D G3DSA:2.40.170.20 170 732 2.9E-148 T 17-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BJD13_16195 54890bb73345d44cac8eed2c96d7a251 732 Pfam PF00593 TonB dependent receptor 249 731 2.5E-41 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_16195 54890bb73345d44cac8eed2c96d7a251 732 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 66 729 5.6E-90 T 17-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 BJD13_16195 54890bb73345d44cac8eed2c96d7a251 732 SUPERFAMILY SSF56935 31 732 3.66E-113 T 17-10-2018 BJD13_10915 37b143ca5d61d170a64e08e3ca02901e 237 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 233 2.5E-49 T 17-10-2018 BJD13_10915 37b143ca5d61d170a64e08e3ca02901e 237 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 1.4E-7 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_10915 37b143ca5d61d170a64e08e3ca02901e 237 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 1.4E-7 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_10915 37b143ca5d61d170a64e08e3ca02901e 237 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 1.4E-7 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_10915 37b143ca5d61d170a64e08e3ca02901e 237 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 182 2.3E-4 T 17-10-2018 BJD13_10915 37b143ca5d61d170a64e08e3ca02901e 237 SUPERFAMILY SSF51735 5 234 1.86E-62 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_10915 37b143ca5d61d170a64e08e3ca02901e 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 199 219 1.6E-32 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_10915 37b143ca5d61d170a64e08e3ca02901e 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.6E-32 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_10915 37b143ca5d61d170a64e08e3ca02901e 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 1.6E-32 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_10915 37b143ca5d61d170a64e08e3ca02901e 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 1.6E-32 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_10915 37b143ca5d61d170a64e08e3ca02901e 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 1.6E-32 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_10915 37b143ca5d61d170a64e08e3ca02901e 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 1.6E-32 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_10915 37b143ca5d61d170a64e08e3ca02901e 237 Gene3D G3DSA:3.40.50.720 1 236 2.5E-72 T 17-10-2018 BJD13_04955 740e33876fce33a800364f8ac15e5c64 106 Pfam PF06844 Protein of unknown function (DUF1244) 34 99 1.1E-36 T 17-10-2018 IPR023163 SMc04008-like domain BJD13_04955 740e33876fce33a800364f8ac15e5c64 106 Gene3D G3DSA:1.10.3340.10 3 106 1.1E-43 T 17-10-2018 IPR036810 SMc04008-like superfamily BJD13_04955 740e33876fce33a800364f8ac15e5c64 106 SUPERFAMILY SSF158757 8 84 1.83E-34 T 17-10-2018 IPR036810 SMc04008-like superfamily BJD13_14490 f7edef1d2e795cc83a68e9b29fa78bf2 260 Pfam PF04402 Protein of unknown function (DUF541) 34 256 7.5E-22 T 17-10-2018 IPR007497 Protein of unknown function DUF541 BJD13_14490 f7edef1d2e795cc83a68e9b29fa78bf2 260 Gene3D G3DSA:3.30.110.170 34 214 5.5E-19 T 17-10-2018 BJD13_14490 f7edef1d2e795cc83a68e9b29fa78bf2 260 Gene3D G3DSA:3.30.70.2970 44 150 5.5E-19 T 17-10-2018 BJD13_04930 7ba49a2b0ef7a7530aaa80eec2c6ceef 392 Gene3D G3DSA:1.25.40.10 38 179 2.6E-18 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_04930 7ba49a2b0ef7a7530aaa80eec2c6ceef 392 Pfam PF13432 Tetratricopeptide repeat 116 169 0.0014 T 17-10-2018 BJD13_04930 7ba49a2b0ef7a7530aaa80eec2c6ceef 392 Pfam PF13432 Tetratricopeptide repeat 190 251 0.0013 T 17-10-2018 BJD13_04930 7ba49a2b0ef7a7530aaa80eec2c6ceef 392 SMART SM00028 185 218 150.0 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD13_04930 7ba49a2b0ef7a7530aaa80eec2c6ceef 392 SMART SM00028 219 252 130.0 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD13_04930 7ba49a2b0ef7a7530aaa80eec2c6ceef 392 SMART SM00028 40 73 56.0 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD13_04930 7ba49a2b0ef7a7530aaa80eec2c6ceef 392 SMART SM00028 112 145 45.0 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD13_04930 7ba49a2b0ef7a7530aaa80eec2c6ceef 392 Gene3D G3DSA:1.25.40.10 180 336 1.7E-9 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_04930 7ba49a2b0ef7a7530aaa80eec2c6ceef 392 SUPERFAMILY SSF81901 44 276 2.48E-18 T 17-10-2018 BJD13_04930 7ba49a2b0ef7a7530aaa80eec2c6ceef 392 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 9 390 35.069 T 17-10-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 BJD13_17395 e596f1659e763518a26548bcdb94aca5 182 SUPERFAMILY SSF56399 7 180 2.88E-57 T 17-10-2018 BJD13_17395 e596f1659e763518a26548bcdb94aca5 182 Pfam PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family 6 171 9.6E-41 T 17-10-2018 IPR002745 Phosphotransferase KptA/Tpt1 GO:0006388|GO:0016772 BJD13_17395 e596f1659e763518a26548bcdb94aca5 182 Gene3D G3DSA:3.20.170.30 98 182 2.3E-30 T 17-10-2018 BJD13_17395 e596f1659e763518a26548bcdb94aca5 182 Hamap MF_00299 Probable RNA 2'-phosphotransferase [kptA]. 4 178 34.144 T 17-10-2018 IPR022928 RNA 2'-phosphotransferase KptA, putative GO:0016773 BJD13_17395 e596f1659e763518a26548bcdb94aca5 182 Gene3D G3DSA:1.10.10.970 4 77 1.2E-17 T 17-10-2018 BJD13_07140 147b63d4e5c7ce641d1718cea22c646e 490 PIRSF PIRSF006060 21 489 6.7E-90 T 17-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BJD13_07140 147b63d4e5c7ce641d1718cea22c646e 490 Pfam PF13520 Amino acid permease 41 458 5.9E-62 T 17-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BJD13_07140 147b63d4e5c7ce641d1718cea22c646e 490 Gene3D G3DSA:1.20.1740.10 32 489 6.0E-124 T 17-10-2018 BJD13_10290 fb685cab6bf402407a01f6c4f861f1e9 120 SUPERFAMILY SSF52091 2 113 6.67E-16 T 17-10-2018 IPR036513 STAS domain superfamily BJD13_10290 fb685cab6bf402407a01f6c4f861f1e9 120 Gene3D G3DSA:3.30.750.24 1 117 3.6E-25 T 17-10-2018 IPR036513 STAS domain superfamily BJD13_04090 3dbed15f55ef3436c1b5f2cdb43c93a4 92 Gene3D G3DSA:1.10.10.10 2 86 1.2E-6 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_04090 3dbed15f55ef3436c1b5f2cdb43c93a4 92 SUPERFAMILY SSF46785 8 79 2.35E-8 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_17440 7429d979602057f988506487bac9f093 150 Gene3D G3DSA:1.10.10.10 9 146 2.0E-28 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_17440 7429d979602057f988506487bac9f093 150 SMART SM00347 28 129 1.8E-13 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD13_17440 7429d979602057f988506487bac9f093 150 ProSitePatterns PS01117 MarR-type HTH domain signature. 68 102 - T 17-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site BJD13_17440 7429d979602057f988506487bac9f093 150 SUPERFAMILY SSF46785 6 144 1.29E-28 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_17440 7429d979602057f988506487bac9f093 150 Pfam PF12802 MarR family 43 93 5.9E-10 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD13_17440 7429d979602057f988506487bac9f093 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 53 69 3.2E-12 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD13_17440 7429d979602057f988506487bac9f093 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 105 3.2E-12 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD13_17440 7429d979602057f988506487bac9f093 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 85 3.2E-12 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD13_17440 7429d979602057f988506487bac9f093 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 119 139 3.2E-12 T 17-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BJD13_07910 6d8002634afbb4039fd720d7f2c27fb6 558 Pfam PF03109 ABC1 family 118 236 1.2E-32 T 17-10-2018 IPR004147 UbiB domain BJD13_07910 6d8002634afbb4039fd720d7f2c27fb6 558 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 12 446 1.6E-166 T 17-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 BJD13_07910 6d8002634afbb4039fd720d7f2c27fb6 558 SUPERFAMILY SSF56112 100 436 3.46E-29 T 17-10-2018 IPR011009 Protein kinase-like domain superfamily BJD13_13460 704bcae29619d114ab17ad10b3ad78dd 586 Pfam PF12796 Ankyrin repeats (3 copies) 474 554 3.9E-9 T 17-10-2018 IPR020683 Ankyrin repeat-containing domain BJD13_13460 704bcae29619d114ab17ad10b3ad78dd 586 SUPERFAMILY SSF53850 77 306 4.69E-25 T 17-10-2018 BJD13_13460 704bcae29619d114ab17ad10b3ad78dd 586 SMART SM00062 82 310 1.9E-18 T 17-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BJD13_13460 704bcae29619d114ab17ad10b3ad78dd 586 Pfam PF13857 Ankyrin repeats (many copies) 412 466 2.7E-8 T 17-10-2018 BJD13_13460 704bcae29619d114ab17ad10b3ad78dd 586 Gene3D G3DSA:1.25.40.20 433 585 1.8E-39 T 17-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily BJD13_13460 704bcae29619d114ab17ad10b3ad78dd 586 SUPERFAMILY SSF48403 346 579 1.69E-52 T 17-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily BJD13_13460 704bcae29619d114ab17ad10b3ad78dd 586 SMART SM00248 524 553 0.04 T 17-10-2018 IPR002110 Ankyrin repeat GO:0005515 BJD13_13460 704bcae29619d114ab17ad10b3ad78dd 586 SMART SM00248 425 454 23.0 T 17-10-2018 IPR002110 Ankyrin repeat GO:0005515 BJD13_13460 704bcae29619d114ab17ad10b3ad78dd 586 SMART SM00248 458 487 0.0071 T 17-10-2018 IPR002110 Ankyrin repeat GO:0005515 BJD13_13460 704bcae29619d114ab17ad10b3ad78dd 586 SMART SM00248 392 421 0.36 T 17-10-2018 IPR002110 Ankyrin repeat GO:0005515 BJD13_13460 704bcae29619d114ab17ad10b3ad78dd 586 SMART SM00248 491 520 0.16 T 17-10-2018 IPR002110 Ankyrin repeat GO:0005515 BJD13_13460 704bcae29619d114ab17ad10b3ad78dd 586 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 85 306 4.7E-12 T 17-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BJD13_13460 704bcae29619d114ab17ad10b3ad78dd 586 Gene3D G3DSA:3.40.190.10 163 270 1.1E-15 T 17-10-2018 BJD13_13460 704bcae29619d114ab17ad10b3ad78dd 586 Gene3D G3DSA:1.25.40.20 359 432 1.4E-14 T 17-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily BJD13_13460 704bcae29619d114ab17ad10b3ad78dd 586 PIRSF PIRSF000654 319 436 7.9E-8 T 17-10-2018 BJD13_13460 704bcae29619d114ab17ad10b3ad78dd 586 PIRSF PIRSF000654 491 585 3.2E-13 T 17-10-2018 BJD13_13460 704bcae29619d114ab17ad10b3ad78dd 586 PIRSF PIRSF000654 425 501 1.1E-6 T 17-10-2018 BJD13_13460 704bcae29619d114ab17ad10b3ad78dd 586 Gene3D G3DSA:3.40.190.10 81 305 1.1E-15 T 17-10-2018 BJD13_13460 704bcae29619d114ab17ad10b3ad78dd 586 TIGRFAM TIGR03871 ABC_peri_MoxJ_2: quinoprotein dehydrogenase-associated probable ABC transporter substrate-binding protein 83 311 2.2E-78 T 17-10-2018 IPR022448 Quinoprotein dehydrogenase-associated BJD13_13410 c83211dcd184e363b97acaf97c252b9f 686 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 3 611 46.934 T 17-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BJD13_13410 c83211dcd184e363b97acaf97c252b9f 686 SUPERFAMILY SSF56519 57 248 1.83E-46 T 17-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 BJD13_13410 c83211dcd184e363b97acaf97c252b9f 686 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 19 607 2.0E-206 T 17-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BJD13_13410 c83211dcd184e363b97acaf97c252b9f 686 SUPERFAMILY SSF56601 250 607 5.43E-92 T 17-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BJD13_13410 c83211dcd184e363b97acaf97c252b9f 686 Gene3D G3DSA:3.40.710.10 248 610 5.2E-90 T 17-10-2018 BJD13_13410 c83211dcd184e363b97acaf97c252b9f 686 Gene3D G3DSA:3.30.1390.30 85 160 1.3E-43 T 17-10-2018 BJD13_13410 c83211dcd184e363b97acaf97c252b9f 686 Pfam PF03717 Penicillin-binding Protein dimerisation domain 65 233 1.2E-40 T 17-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 BJD13_13410 c83211dcd184e363b97acaf97c252b9f 686 Pfam PF00905 Penicillin binding protein transpeptidase domain 266 604 4.4E-64 T 17-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 BJD13_13410 c83211dcd184e363b97acaf97c252b9f 686 Gene3D G3DSA:3.90.1310.10 66 244 1.3E-43 T 17-10-2018 BJD13_14585 3838ba30882a5838df7316a72e3b998b 94 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 36 87 3.7E-19 T 17-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 BJD13_14585 3838ba30882a5838df7316a72e3b998b 94 PIRSF PIRSF028784 4 94 1.6E-26 T 17-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 BJD13_12645 218140897aa468d7afda6a20b89e9dea 403 SUPERFAMILY SSF55973 3 109 5.89E-46 T 17-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BJD13_12645 218140897aa468d7afda6a20b89e9dea 403 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 3 101 1.1E-41 T 17-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BJD13_12645 218140897aa468d7afda6a20b89e9dea 403 Gene3D G3DSA:3.30.300.10 11 272 5.6E-171 T 17-10-2018 BJD13_12645 218140897aa468d7afda6a20b89e9dea 403 Gene3D G3DSA:3.30.300.10 102 391 5.6E-171 T 17-10-2018 BJD13_12645 218140897aa468d7afda6a20b89e9dea 403 Gene3D G3DSA:3.30.300.10 5 235 5.6E-171 T 17-10-2018 BJD13_12645 218140897aa468d7afda6a20b89e9dea 403 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 370 1.3E-181 T 17-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BJD13_12645 218140897aa468d7afda6a20b89e9dea 403 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 235 371 3.6E-68 T 17-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BJD13_12645 218140897aa468d7afda6a20b89e9dea 403 PIRSF PIRSF000497 1 401 6.7E-170 T 17-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BJD13_12645 218140897aa468d7afda6a20b89e9dea 403 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 17-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BJD13_12645 218140897aa468d7afda6a20b89e9dea 403 SUPERFAMILY SSF55973 110 234 3.92E-47 T 17-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BJD13_12645 218140897aa468d7afda6a20b89e9dea 403 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 261 269 - T 17-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BJD13_12645 218140897aa468d7afda6a20b89e9dea 403 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 233 5.8E-43 T 17-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BJD13_12645 218140897aa468d7afda6a20b89e9dea 403 SUPERFAMILY SSF55973 235 401 2.28E-67 T 17-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BJD13_12645 218140897aa468d7afda6a20b89e9dea 403 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 400 56.211 T 17-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BJD13_20820 dd262a3d19867df32811827b700534f6 266 PIRSF PIRSF002854 1 266 1.3E-101 T 17-10-2018 IPR004872 Lipoprotein NlpA family BJD13_20820 dd262a3d19867df32811827b700534f6 266 SUPERFAMILY SSF53850 30 266 1.12E-81 T 17-10-2018 BJD13_20820 dd262a3d19867df32811827b700534f6 266 Pfam PF03180 NLPA lipoprotein 31 266 1.7E-97 T 17-10-2018 IPR004872 Lipoprotein NlpA family BJD13_20820 dd262a3d19867df32811827b700534f6 266 Gene3D G3DSA:3.40.190.10 112 216 1.1E-97 T 17-10-2018 BJD13_20820 dd262a3d19867df32811827b700534f6 266 Gene3D G3DSA:3.40.190.10 30 262 1.1E-97 T 17-10-2018 BJD13_13000 2f7768ea543e4aa6f5eaea3629f9b1dc 207 Gene3D G3DSA:2.40.160.10 12 207 6.1E-6 T 17-10-2018 IPR023614 Porin domain superfamily BJD13_21995 1d74c52b6fc5c339492619f24d49a5a0 219 SUPERFAMILY SSF56112 15 148 2.49E-15 T 17-10-2018 IPR011009 Protein kinase-like domain superfamily BJD13_21995 1d74c52b6fc5c339492619f24d49a5a0 219 Gene3D G3DSA:1.10.510.10 90 207 4.0E-6 T 17-10-2018 BJD13_02410 47e31c5ce20329393532128dfabe33ae 156 SUPERFAMILY SSF51182 36 154 1.25E-30 T 17-10-2018 IPR011051 RmlC-like cupin domain superfamily BJD13_02410 47e31c5ce20329393532128dfabe33ae 156 Gene3D G3DSA:2.60.120.10 25 155 3.3E-49 T 17-10-2018 IPR014710 RmlC-like jelly roll fold BJD13_02410 47e31c5ce20329393532128dfabe33ae 156 Pfam PF07883 Cupin domain 65 128 4.8E-12 T 17-10-2018 IPR013096 Cupin 2, conserved barrel BJD13_16105 0ba98c609afe185760571d55b840d6a7 210 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 158 2.4E-17 T 17-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain BJD13_16105 0ba98c609afe185760571d55b840d6a7 210 PIRSF PIRSF009320 1 207 3.6E-28 T 17-10-2018 BJD13_16105 0ba98c609afe185760571d55b840d6a7 210 Gene3D G3DSA:3.40.50.300 4 210 2.2E-39 T 17-10-2018 BJD13_16105 0ba98c609afe185760571d55b840d6a7 210 SUPERFAMILY SSF52540 1 208 1.53E-32 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_13095 e54c9b5eb576a8ccd890fc9e1725a3dc 216 Pfam PF13462 Thioredoxin 49 199 7.2E-11 T 17-10-2018 IPR012336 Thioredoxin-like fold BJD13_13095 e54c9b5eb576a8ccd890fc9e1725a3dc 216 SUPERFAMILY SSF52833 27 206 3.53E-40 T 17-10-2018 IPR036249 Thioredoxin-like superfamily BJD13_13095 e54c9b5eb576a8ccd890fc9e1725a3dc 216 Gene3D G3DSA:3.40.30.10 24 214 6.1E-53 T 17-10-2018 BJD13_13095 e54c9b5eb576a8ccd890fc9e1725a3dc 216 PIRSF PIRSF001488 6 211 4.3E-33 T 17-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL BJD13_13095 e54c9b5eb576a8ccd890fc9e1725a3dc 216 ProSitePatterns PS00194 Thioredoxin family active site. 52 70 - T 17-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 BJD13_22185 4ca06d071ce340142dfa7520fe16995c 99 SMART SM01409 8 62 5.1E-16 T 17-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 BJD13_22185 4ca06d071ce340142dfa7520fe16995c 99 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 63 17.87 T 17-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD13_22185 4ca06d071ce340142dfa7520fe16995c 99 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 2.8E-20 T 17-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BJD13_22185 4ca06d071ce340142dfa7520fe16995c 99 Gene3D G3DSA:3.90.940.10 1 94 2.0E-26 T 17-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 BJD13_22185 4ca06d071ce340142dfa7520fe16995c 99 SUPERFAMILY SSF63562 1 77 1.96E-24 T 17-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 BJD13_22185 4ca06d071ce340142dfa7520fe16995c 99 Pfam PF01192 RNA polymerase Rpb6 8 60 7.7E-16 T 17-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 BJD13_15200 aad5978dee77b23a746f4a8624f079e3 436 ProSitePatterns PS00216 Sugar transport proteins signature 1. 77 92 - T 17-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 BJD13_15200 aad5978dee77b23a746f4a8624f079e3 436 Gene3D G3DSA:1.20.1250.20 19 432 1.3E-61 T 17-10-2018 BJD13_15200 aad5978dee77b23a746f4a8624f079e3 436 SUPERFAMILY SSF103473 15 432 2.09E-64 T 17-10-2018 IPR036259 MFS transporter superfamily BJD13_15200 aad5978dee77b23a746f4a8624f079e3 436 Pfam PF07690 Major Facilitator Superfamily 28 368 2.4E-28 T 17-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD13_13930 a04dbf3e6e11ffa541cf9be265c96530 317 Gene3D G3DSA:2.40.10.10 76 263 2.4E-6 T 17-10-2018 BJD13_13930 a04dbf3e6e11ffa541cf9be265c96530 317 Gene3D G3DSA:2.40.10.10 154 256 2.4E-6 T 17-10-2018 BJD13_13930 a04dbf3e6e11ffa541cf9be265c96530 317 Pfam PF00089 Trypsin 219 261 1.2E-4 T 17-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 BJD13_13930 a04dbf3e6e11ffa541cf9be265c96530 317 SUPERFAMILY SSF50494 76 262 1.57E-14 T 17-10-2018 IPR009003 Peptidase S1, PA clan BJD13_01800 861be84310e517a97812933d25572d4f 182 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 21 171 6.5E-38 T 17-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 BJD13_01800 861be84310e517a97812933d25572d4f 182 Gene3D G3DSA:3.40.50.1000 1 182 8.7E-56 T 17-10-2018 IPR023214 HAD superfamily BJD13_01800 861be84310e517a97812933d25572d4f 182 Pfam PF08282 haloacid dehalogenase-like hydrolase 94 153 3.2E-7 T 17-10-2018 BJD13_01800 861be84310e517a97812933d25572d4f 182 SUPERFAMILY SSF56784 16 178 4.07E-39 T 17-10-2018 IPR036412 HAD-like superfamily BJD13_01800 861be84310e517a97812933d25572d4f 182 PIRSF PIRSF006118 7 181 9.5E-68 T 17-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 BJD13_23670 5f49722f3b38b1bc39516b2bd816daea 348 Pfam PF00535 Glycosyl transferase family 2 17 172 3.3E-24 T 17-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BJD13_23670 5f49722f3b38b1bc39516b2bd816daea 348 Gene3D G3DSA:3.90.550.10 4 223 5.0E-26 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD13_23670 5f49722f3b38b1bc39516b2bd816daea 348 SUPERFAMILY SSF53448 16 265 2.34E-33 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD13_11330 69153534356191aa594a45fb11ff08ef 148 SUPERFAMILY SSF54690 12 145 8.63E-44 T 17-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 BJD13_11330 69153534356191aa594a45fb11ff08ef 148 Pfam PF02391 MoaE protein 14 125 1.8E-35 T 17-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 BJD13_11330 69153534356191aa594a45fb11ff08ef 148 Gene3D G3DSA:3.90.1170.40 2 146 1.6E-46 T 17-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 BJD13_10790 55966ae5d2cc8490f9dd18a6099da12d 248 SUPERFAMILY SSF141868 20 237 1.83E-58 T 17-10-2018 IPR035919 EAL domain superfamily BJD13_10790 55966ae5d2cc8490f9dd18a6099da12d 248 SMART SM00052 12 241 9.3E-30 T 17-10-2018 IPR001633 EAL domain BJD13_10790 55966ae5d2cc8490f9dd18a6099da12d 248 Pfam PF00563 EAL domain 21 236 8.2E-49 T 17-10-2018 IPR001633 EAL domain BJD13_10790 55966ae5d2cc8490f9dd18a6099da12d 248 Gene3D G3DSA:3.20.20.450 7 248 3.7E-65 T 17-10-2018 IPR035919 EAL domain superfamily BJD13_10010 3088dacb4f6f90858d6b34a137321b64 298 SUPERFAMILY SSF89069 17 84 1.16E-14 T 17-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 BJD13_10010 3088dacb4f6f90858d6b34a137321b64 298 Gene3D G3DSA:1.10.10.880 17 84 1.5E-14 T 17-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 BJD13_10010 3088dacb4f6f90858d6b34a137321b64 298 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 18 92 1.1E-15 T 17-10-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 BJD13_00720 1136ff18fb846e892f5cf51f4e823c63 232 SUPERFAMILY SSF160930 30 183 7.45E-6 T 17-10-2018 BJD13_11740 6c42c0908c218b43df9aa1122e4f035a 328 Gene3D G3DSA:3.40.50.720 1 156 2.3E-58 T 17-10-2018 BJD13_11740 6c42c0908c218b43df9aa1122e4f035a 328 Hamap MF_01517 Malate dehydrogenase [mdh]. 1 327 55.608 T 17-10-2018 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 BJD13_11740 6c42c0908c218b43df9aa1122e4f035a 328 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 159 321 9.2E-31 T 17-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 BJD13_11740 6c42c0908c218b43df9aa1122e4f035a 328 SUPERFAMILY SSF56327 159 327 2.01E-58 T 17-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 BJD13_11740 6c42c0908c218b43df9aa1122e4f035a 328 TIGRFAM TIGR01759 MalateDH-SF1: malate dehydrogenase 3 321 9.5E-143 T 17-10-2018 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 BJD13_11740 6c42c0908c218b43df9aa1122e4f035a 328 SUPERFAMILY SSF51735 3 157 2.24E-44 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_11740 6c42c0908c218b43df9aa1122e4f035a 328 PIRSF PIRSF000102 1 325 4.2E-63 T 17-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 BJD13_11740 6c42c0908c218b43df9aa1122e4f035a 328 Gene3D G3DSA:3.90.110.10 157 328 5.4E-61 T 17-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 BJD13_11740 6c42c0908c218b43df9aa1122e4f035a 328 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 5 154 5.0E-35 T 17-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 BJD13_08085 ea85c0bfef0af90acec9621d18b41dcc 573 Gene3D G3DSA:1.20.1560.10 16 319 2.8E-16 T 17-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BJD13_08085 ea85c0bfef0af90acec9621d18b41dcc 573 SUPERFAMILY SSF52540 365 554 6.79E-37 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_08085 ea85c0bfef0af90acec9621d18b41dcc 573 SUPERFAMILY SSF90123 20 314 7.32E-22 T 17-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BJD13_08085 ea85c0bfef0af90acec9621d18b41dcc 573 Gene3D G3DSA:3.40.50.300 367 566 2.1E-39 T 17-10-2018 BJD13_08085 ea85c0bfef0af90acec9621d18b41dcc 573 Pfam PF00005 ABC transporter 367 509 1.4E-18 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD13_08085 ea85c0bfef0af90acec9621d18b41dcc 573 SMART SM00382 369 555 4.0E-8 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_08085 ea85c0bfef0af90acec9621d18b41dcc 573 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD13_05610 5a4eb97e31bdd461e2e152043f6c2ec0 200 Pfam PF05401 Nodulation protein S (NodS) 15 142 4.4E-14 T 17-10-2018 IPR008715 SAM-dependent methyltransferase, NodS-related GO:0008757|GO:0009312|GO:0009877 BJD13_05610 5a4eb97e31bdd461e2e152043f6c2ec0 200 Gene3D G3DSA:3.40.50.150 25 188 1.8E-39 T 17-10-2018 BJD13_05610 5a4eb97e31bdd461e2e152043f6c2ec0 200 SUPERFAMILY SSF53335 17 151 4.42E-23 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_23800 147ce1c0ad6c4ebcd4ad79eaa61bad41 199 PIRSF PIRSF000190 2 199 7.4E-64 T 17-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 BJD13_23800 147ce1c0ad6c4ebcd4ad79eaa61bad41 199 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 2 105 2.0E-27 T 17-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 BJD13_23800 147ce1c0ad6c4ebcd4ad79eaa61bad41 199 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 158 199 2.0E-14 T 17-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 BJD13_23800 147ce1c0ad6c4ebcd4ad79eaa61bad41 199 Gene3D G3DSA:2.30.110.10 1 193 1.1E-69 T 17-10-2018 IPR012349 FMN-binding split barrel GO:0048037 BJD13_23800 147ce1c0ad6c4ebcd4ad79eaa61bad41 199 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 3 197 2.9E-63 T 17-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 BJD13_23800 147ce1c0ad6c4ebcd4ad79eaa61bad41 199 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 168 181 - T 17-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 BJD13_23800 147ce1c0ad6c4ebcd4ad79eaa61bad41 199 SUPERFAMILY SSF50475 2 199 3.34E-56 T 17-10-2018 BJD13_23800 147ce1c0ad6c4ebcd4ad79eaa61bad41 199 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 4 199 34.89 T 17-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 BJD13_18825 b1499c35f3719ab4d8231a31ebe24b3b 229 SUPERFAMILY SSF47616 78 206 3.0E-35 T 17-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily BJD13_18825 b1499c35f3719ab4d8231a31ebe24b3b 229 Gene3D G3DSA:1.20.1050.10 91 226 2.0E-50 T 17-10-2018 BJD13_18825 b1499c35f3719ab4d8231a31ebe24b3b 229 SUPERFAMILY SSF52833 1 84 3.25E-22 T 17-10-2018 IPR036249 Thioredoxin-like superfamily BJD13_18825 b1499c35f3719ab4d8231a31ebe24b3b 229 Pfam PF00043 Glutathione S-transferase, C-terminal domain 132 197 1.4E-12 T 17-10-2018 IPR004046 Glutathione S-transferase, C-terminal BJD13_18825 b1499c35f3719ab4d8231a31ebe24b3b 229 Gene3D G3DSA:3.40.30.10 1 90 8.0E-31 T 17-10-2018 BJD13_18825 b1499c35f3719ab4d8231a31ebe24b3b 229 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 81 1.5E-14 T 17-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 BJD13_04105 514a7a212a0b297fca31261c33617701 432 Gene3D G3DSA:3.40.50.2300 134 266 1.1E-27 T 17-10-2018 BJD13_04105 514a7a212a0b297fca31261c33617701 432 SUPERFAMILY SSF52172 140 270 1.71E-30 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_04105 514a7a212a0b297fca31261c33617701 432 SUPERFAMILY SSF55073 275 430 6.04E-47 T 17-10-2018 IPR029787 Nucleotide cyclase BJD13_04105 514a7a212a0b297fca31261c33617701 432 Gene3D G3DSA:3.40.50.2300 14 133 1.1E-10 T 17-10-2018 BJD13_04105 514a7a212a0b297fca31261c33617701 432 SMART SM00448 17 133 0.036 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_04105 514a7a212a0b297fca31261c33617701 432 SMART SM00448 139 253 8.9E-27 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_04105 514a7a212a0b297fca31261c33617701 432 SMART SM00267 259 431 6.1E-53 T 17-10-2018 IPR000160 GGDEF domain BJD13_04105 514a7a212a0b297fca31261c33617701 432 Pfam PF00072 Response regulator receiver domain 142 250 3.1E-20 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_04105 514a7a212a0b297fca31261c33617701 432 SUPERFAMILY SSF52172 17 138 1.07E-11 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_04105 514a7a212a0b297fca31261c33617701 432 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 266 430 5.5E-49 T 17-10-2018 IPR000160 GGDEF domain BJD13_04105 514a7a212a0b297fca31261c33617701 432 Gene3D G3DSA:3.30.70.270 267 431 5.4E-54 T 17-10-2018 BJD13_04105 514a7a212a0b297fca31261c33617701 432 Pfam PF00990 Diguanylate cyclase, GGDEF domain 270 427 4.2E-42 T 17-10-2018 IPR000160 GGDEF domain BJD13_21770 a2f93fb7f605ca8412af268991328d4d 259 Pfam PF13531 Bacterial extracellular solute-binding protein 28 253 7.9E-36 T 17-10-2018 BJD13_21770 a2f93fb7f605ca8412af268991328d4d 259 Gene3D G3DSA:3.40.190.10 110 217 8.7E-27 T 17-10-2018 BJD13_21770 a2f93fb7f605ca8412af268991328d4d 259 Gene3D G3DSA:3.40.190.10 29 253 8.7E-27 T 17-10-2018 BJD13_21770 a2f93fb7f605ca8412af268991328d4d 259 SUPERFAMILY SSF53850 27 256 5.62E-40 T 17-10-2018 BJD13_01645 ad8002e4bdeae7ab1b2a5c114a25a14d 335 SMART SM00849 77 278 0.0043 T 17-10-2018 IPR001279 Metallo-beta-lactamase BJD13_01645 ad8002e4bdeae7ab1b2a5c114a25a14d 335 SUPERFAMILY SSF56281 60 334 2.71E-49 T 17-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BJD13_01645 ad8002e4bdeae7ab1b2a5c114a25a14d 335 Gene3D G3DSA:3.60.15.10 58 335 8.3E-63 T 17-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BJD13_01645 ad8002e4bdeae7ab1b2a5c114a25a14d 335 Pfam PF12706 Beta-lactamase superfamily domain 89 301 1.1E-18 T 17-10-2018 IPR001279 Metallo-beta-lactamase BJD13_09575 93a0ec8f08c458c58975abe6f6a20853 120 Gene3D G3DSA:1.10.10.10 3 119 3.2E-28 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_09575 93a0ec8f08c458c58975abe6f6a20853 120 Pfam PF03551 Transcriptional regulator PadR-like family 24 98 3.3E-19 T 17-10-2018 IPR005149 Transcription regulator PadR, N-terminal BJD13_09575 93a0ec8f08c458c58975abe6f6a20853 120 SUPERFAMILY SSF46785 20 117 5.19E-24 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_04720 a9a4b3e44edebc3fba7c83f166d54959 383 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 6 380 1.2E-128 T 17-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 BJD13_04720 a9a4b3e44edebc3fba7c83f166d54959 383 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 11 366 2.3E-103 T 17-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 BJD13_04720 a9a4b3e44edebc3fba7c83f166d54959 383 PIRSF PIRSF000267 6 382 5.3E-116 T 17-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 BJD13_11410 6e7228d83e875aade129aef7b99d0c15 683 Gene3D G3DSA:3.30.930.30 39 236 1.7E-63 T 17-10-2018 BJD13_11410 6e7228d83e875aade129aef7b99d0c15 683 Pfam PF03389 MobA/MobL family 55 243 1.6E-47 T 17-10-2018 IPR005053 MobA/MobL protein BJD13_22990 25d751682002870b6acf6a2dcaac86a7 441 SUPERFAMILY SSF53474 33 181 4.82E-15 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_22990 25d751682002870b6acf6a2dcaac86a7 441 Gene3D G3DSA:3.40.50.1820 21 155 1.5E-7 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_07280 0638bed0db518500153e5f49058c8f4b 122 Pfam PF15586 Immunity protein 8 10 113 4.0E-30 T 17-10-2018 IPR028964 Immunity protein 8 BJD13_06285 eb9060be6e673c893db882a28a90bfa1 642 Pfam PF01841 Transglutaminase-like superfamily 269 342 2.3E-8 T 17-10-2018 IPR002931 Transglutaminase-like BJD13_06285 eb9060be6e673c893db882a28a90bfa1 642 Gene3D G3DSA:2.60.40.3140 36 244 7.2E-42 T 17-10-2018 BJD13_06285 eb9060be6e673c893db882a28a90bfa1 642 Pfam PF12969 Domain of Unknown Function with PDB structure (DUF3857) 54 222 1.2E-35 T 17-10-2018 IPR024618 Domain of unknown function DUF3857 BJD13_06285 eb9060be6e673c893db882a28a90bfa1 642 Gene3D G3DSA:3.10.620.30 255 390 7.7E-31 T 17-10-2018 BJD13_06285 eb9060be6e673c893db882a28a90bfa1 642 SUPERFAMILY SSF54001 264 345 7.52E-10 T 17-10-2018 IPR038765 Papain-like cysteine peptidase superfamily BJD13_02970 f79dfbdfcf8dfd6307267ca91656c9c8 488 Gene3D G3DSA:1.25.40.10 315 488 1.5E-5 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_02970 f79dfbdfcf8dfd6307267ca91656c9c8 488 Pfam PF01694 Rhomboid family 148 298 3.1E-25 T 17-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 BJD13_02970 f79dfbdfcf8dfd6307267ca91656c9c8 488 SUPERFAMILY SSF144091 12 304 1.31E-38 T 17-10-2018 BJD13_02970 f79dfbdfcf8dfd6307267ca91656c9c8 488 Gene3D G3DSA:1.20.1540.10 127 307 6.6E-25 T 17-10-2018 IPR035952 Rhomboid-like superfamily BJD13_13145 fc738cece3fcdd948fa58c18c06deb3a 384 Gene3D G3DSA:3.20.20.140 62 349 3.4E-122 T 17-10-2018 BJD13_13145 fc738cece3fcdd948fa58c18c06deb3a 384 SUPERFAMILY SSF51338 8 382 2.95E-13 T 17-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BJD13_13145 fc738cece3fcdd948fa58c18c06deb3a 384 SUPERFAMILY SSF51556 61 355 8.71E-95 T 17-10-2018 IPR032466 Metal-dependent hydrolase BJD13_13145 fc738cece3fcdd948fa58c18c06deb3a 384 Pfam PF01979 Amidohydrolase family 57 382 1.0E-26 T 17-10-2018 IPR006680 Amidohydrolase-related GO:0016787 BJD13_13145 fc738cece3fcdd948fa58c18c06deb3a 384 PIRSF PIRSF038994 6 384 1.1E-110 T 17-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 BJD13_13145 fc738cece3fcdd948fa58c18c06deb3a 384 Gene3D G3DSA:2.30.40.10 11 381 3.4E-122 T 17-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BJD13_13145 fc738cece3fcdd948fa58c18c06deb3a 384 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 8 381 2.4E-95 T 17-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 BJD13_00965 162ae730801c2eb3b3051497c36acd96 268 Gene3D G3DSA:1.10.530.10 99 246 2.2E-40 T 17-10-2018 BJD13_00965 162ae730801c2eb3b3051497c36acd96 268 SMART SM00047 97 255 8.0E-25 T 17-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 BJD13_00965 162ae730801c2eb3b3051497c36acd96 268 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 109 243 4.5E-19 T 17-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 BJD13_00965 162ae730801c2eb3b3051497c36acd96 268 PRINTS PR01002 Flagellar protein FlgJ signature 185 206 1.9E-16 T 17-10-2018 BJD13_00965 162ae730801c2eb3b3051497c36acd96 268 PRINTS PR01002 Flagellar protein FlgJ signature 122 140 1.9E-16 T 17-10-2018 BJD13_00965 162ae730801c2eb3b3051497c36acd96 268 PRINTS PR01002 Flagellar protein FlgJ signature 142 163 1.9E-16 T 17-10-2018 BJD13_00965 162ae730801c2eb3b3051497c36acd96 268 PRINTS PR01002 Flagellar protein FlgJ signature 228 246 1.9E-16 T 17-10-2018 BJD13_20800 b9aeafc107c7f3451c0f671de6317a9f 161 SUPERFAMILY SSF89963 90 161 1.28E-26 T 17-10-2018 IPR036183 YajQ-like superfamily BJD13_20800 b9aeafc107c7f3451c0f671de6317a9f 161 SUPERFAMILY SSF89963 2 85 4.97E-29 T 17-10-2018 IPR036183 YajQ-like superfamily BJD13_20800 b9aeafc107c7f3451c0f671de6317a9f 161 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 161 28.996 T 17-10-2018 IPR007551 Protein of unknown function DUF520 BJD13_20800 b9aeafc107c7f3451c0f671de6317a9f 161 Gene3D G3DSA:3.30.70.990 9 95 5.1E-33 T 17-10-2018 IPR035570 UPF0234, N-terminal BJD13_20800 b9aeafc107c7f3451c0f671de6317a9f 161 Pfam PF04461 Protein of unknown function (DUF520) 2 160 1.5E-61 T 17-10-2018 IPR007551 Protein of unknown function DUF520 BJD13_20800 b9aeafc107c7f3451c0f671de6317a9f 161 Gene3D G3DSA:3.30.70.860 96 161 1.2E-30 T 17-10-2018 IPR035571 UPF0234-like, C-terminal BJD13_01450 936c17a85bfd491b5def29c33fcc293d 685 Gene3D G3DSA:3.40.50.300 326 561 1.1E-45 T 17-10-2018 BJD13_01450 936c17a85bfd491b5def29c33fcc293d 685 SUPERFAMILY SSF52540 113 563 2.65E-44 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_01450 936c17a85bfd491b5def29c33fcc293d 685 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 122 562 1.1E-102 T 17-10-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 BJD13_21290 6538ee59d80f7941b98a48de3923d823 153 SUPERFAMILY SSF81273 81 123 2.2E-13 T 17-10-2018 BJD13_21290 6538ee59d80f7941b98a48de3923d823 153 Pfam PF00816 H-NS histone family 12 116 5.1E-23 T 17-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 BJD13_21290 6538ee59d80f7941b98a48de3923d823 153 SMART SM00528 77 122 8.8E-17 T 17-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 BJD13_21290 6538ee59d80f7941b98a48de3923d823 153 Gene3D G3DSA:4.10.430.10 75 125 2.1E-18 T 17-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 BJD13_18250 6614b7c00d7e42028d8dd1e70addc2bd 223 TIGRFAM TIGR02798 ligK_PcmE: 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase 4 223 7.6E-113 T 17-10-2018 IPR014165 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase KEGG: 00362+4.1.3.17|KEGG: 00660+4.1.3.17|MetaCyc: PWY-7701 BJD13_18250 6614b7c00d7e42028d8dd1e70addc2bd 223 SUPERFAMILY SSF89562 22 183 7.46E-49 T 17-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily BJD13_18250 6614b7c00d7e42028d8dd1e70addc2bd 223 Pfam PF03737 Aldolase/RraA 28 172 7.2E-40 T 17-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein BJD13_18250 6614b7c00d7e42028d8dd1e70addc2bd 223 Gene3D G3DSA:3.50.30.40 23 173 2.1E-53 T 17-10-2018 BJD13_00645 94dbdfc01bb6de372f3617adcd17c7d6 439 Pfam PF09673 Type-F conjugative transfer system pilin assembly protein 137 223 5.2E-7 T 17-10-2018 IPR019106 Type-F conjugative transfer system pilin assembly protein TrbC BJD13_04630 460b7ad0c1c6ed31278d48f188e3c00f 474 Pfam PF09190 DALR domain 348 417 7.8E-11 T 17-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 BJD13_04630 460b7ad0c1c6ed31278d48f188e3c00f 474 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 18 315 9.1E-113 T 17-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 BJD13_04630 460b7ad0c1c6ed31278d48f188e3c00f 474 SMART SM00840 347 417 4.0E-11 T 17-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 BJD13_04630 460b7ad0c1c6ed31278d48f188e3c00f 474 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 3 473 6.6E-148 T 17-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 BJD13_04630 460b7ad0c1c6ed31278d48f188e3c00f 474 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 9.7E-29 T 17-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 BJD13_04630 460b7ad0c1c6ed31278d48f188e3c00f 474 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 9.7E-29 T 17-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 BJD13_04630 460b7ad0c1c6ed31278d48f188e3c00f 474 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 26 37 9.7E-29 T 17-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 BJD13_04630 460b7ad0c1c6ed31278d48f188e3c00f 474 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 62 71 9.7E-29 T 17-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 BJD13_04630 460b7ad0c1c6ed31278d48f188e3c00f 474 SUPERFAMILY SSF47323 317 473 3.53E-30 T 17-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 BJD13_04630 460b7ad0c1c6ed31278d48f188e3c00f 474 Gene3D G3DSA:3.40.50.620 1 306 4.7E-121 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD13_04630 460b7ad0c1c6ed31278d48f188e3c00f 474 SUPERFAMILY SSF52374 4 315 4.16E-90 T 17-10-2018 BJD13_04630 460b7ad0c1c6ed31278d48f188e3c00f 474 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 3 474 37.021 T 17-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 BJD13_04630 460b7ad0c1c6ed31278d48f188e3c00f 474 Gene3D G3DSA:1.20.120.640 308 474 6.7E-38 T 17-10-2018 BJD13_03435 6b8942df1308a510dc032a7582857eef 162 Pfam PF13827 Domain of unknown function (DUF4189) 58 154 4.6E-21 T 17-10-2018 IPR025240 Domain of unknown function DUF4189 BJD13_22975 7f764b3058e93804ccd2f0e8317cef61 713 Gene3D G3DSA:2.170.130.10 63 185 3.4E-28 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_22975 7f764b3058e93804ccd2f0e8317cef61 713 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 68 713 2.7E-81 T 17-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 BJD13_22975 7f764b3058e93804ccd2f0e8317cef61 713 SUPERFAMILY SSF56935 46 713 6.02E-108 T 17-10-2018 BJD13_22975 7f764b3058e93804ccd2f0e8317cef61 713 Gene3D G3DSA:2.40.170.20 192 713 5.6E-108 T 17-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BJD13_22975 7f764b3058e93804ccd2f0e8317cef61 713 Pfam PF00593 TonB dependent receptor 263 712 3.5E-41 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_22975 7f764b3058e93804ccd2f0e8317cef61 713 Pfam PF07715 TonB-dependent Receptor Plug Domain 65 176 1.9E-22 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_04095 7e05db95cbffe6ef9e0512cd4314d927 426 SUPERFAMILY SSF103473 10 426 1.96E-58 T 17-10-2018 IPR036259 MFS transporter superfamily BJD13_04095 7e05db95cbffe6ef9e0512cd4314d927 426 Gene3D G3DSA:1.20.1250.20 15 423 1.4E-54 T 17-10-2018 BJD13_04095 7e05db95cbffe6ef9e0512cd4314d927 426 Pfam PF07690 Major Facilitator Superfamily 23 373 1.9E-19 T 17-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD13_14160 064c8264593087561cd8670c446a59cb 357 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 349 3.5E-161 T 17-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 BJD13_14160 064c8264593087561cd8670c446a59cb 357 Gene3D G3DSA:3.20.20.70 3 350 7.7E-160 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD13_14160 064c8264593087561cd8670c446a59cb 357 PIRSF PIRSF001361 2 352 4.4E-158 T 17-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 BJD13_14160 064c8264593087561cd8670c446a59cb 357 Pfam PF00793 DAHP synthetase I family 40 338 1.0E-100 T 17-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 BJD13_14160 064c8264593087561cd8670c446a59cb 357 SUPERFAMILY SSF51569 7 348 3.87E-135 T 17-10-2018 BJD13_18575 0a24c5448a1cf834676c0da6c07e753c 215 Gene3D G3DSA:2.50.20.10 30 192 1.1E-6 T 17-10-2018 BJD13_10765 79b49d1028d297122e943cf064e9bc1d 192 Pfam PF01799 [2Fe-2S] binding domain 95 167 7.1E-30 T 17-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 BJD13_10765 79b49d1028d297122e943cf064e9bc1d 192 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 61 69 - T 17-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 BJD13_10765 79b49d1028d297122e943cf064e9bc1d 192 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 28 77 5.8E-6 T 17-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 BJD13_10765 79b49d1028d297122e943cf064e9bc1d 192 Gene3D G3DSA:3.10.20.30 14 96 4.0E-31 T 17-10-2018 IPR012675 Beta-grasp domain superfamily BJD13_10765 79b49d1028d297122e943cf064e9bc1d 192 SUPERFAMILY SSF47741 106 176 1.01E-28 T 17-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily BJD13_10765 79b49d1028d297122e943cf064e9bc1d 192 Gene3D G3DSA:1.10.150.120 97 187 1.8E-31 T 17-10-2018 BJD13_10765 79b49d1028d297122e943cf064e9bc1d 192 SUPERFAMILY SSF54292 22 109 6.16E-27 T 17-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 BJD13_17680 8b362b395a0aec481f527713450adbc4 330 SUPERFAMILY SSF51445 21 322 4.06E-83 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily BJD13_17680 8b362b395a0aec481f527713450adbc4 330 PRINTS PR00134 Glycosyl hydrolase family 10 signature 211 223 2.2E-5 T 17-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 BJD13_17680 8b362b395a0aec481f527713450adbc4 330 PRINTS PR00134 Glycosyl hydrolase family 10 signature 130 141 2.2E-5 T 17-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 BJD13_17680 8b362b395a0aec481f527713450adbc4 330 PRINTS PR00134 Glycosyl hydrolase family 10 signature 183 194 2.2E-5 T 17-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 BJD13_17680 8b362b395a0aec481f527713450adbc4 330 PRINTS PR00134 Glycosyl hydrolase family 10 signature 89 101 2.2E-5 T 17-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 BJD13_17680 8b362b395a0aec481f527713450adbc4 330 Pfam PF00331 Glycosyl hydrolase family 10 33 318 3.1E-52 T 17-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 BJD13_17680 8b362b395a0aec481f527713450adbc4 330 Gene3D G3DSA:3.20.20.80 22 326 2.4E-97 T 17-10-2018 BJD13_17680 8b362b395a0aec481f527713450adbc4 330 SMART SM00633 58 323 2.3E-16 T 17-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 BJD13_11375 0be299ab7d56ba7e9ad1eaec4c8317e0 111 Gene3D G3DSA:1.10.260.40 10 110 1.7E-20 T 17-10-2018 BJD13_11375 0be299ab7d56ba7e9ad1eaec4c8317e0 111 SMART SM00530 14 74 5.3E-13 T 17-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BJD13_11375 0be299ab7d56ba7e9ad1eaec4c8317e0 111 Pfam PF13560 Helix-turn-helix domain 11 71 9.8E-13 T 17-10-2018 BJD13_11375 0be299ab7d56ba7e9ad1eaec4c8317e0 111 SUPERFAMILY SSF47413 10 79 1.21E-13 T 17-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BJD13_08495 b00e2a717d36562f5dd728bd239855ab 112 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 1.1E-16 T 17-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 BJD13_08495 b00e2a717d36562f5dd728bd239855ab 112 SUPERFAMILY SSF89360 1 96 8.83E-27 T 17-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 BJD13_08495 b00e2a717d36562f5dd728bd239855ab 112 Gene3D G3DSA:2.60.300.12 2 107 8.9E-33 T 17-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 BJD13_08495 b00e2a717d36562f5dd728bd239855ab 112 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 106 1.1E-31 T 17-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 BJD13_08495 b00e2a717d36562f5dd728bd239855ab 112 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 17-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 BJD13_00320 d0f5aab6908b90139b282a327827c6a7 66 SUPERFAMILY SSF55008 2 65 9.69E-10 T 17-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 BJD13_00320 d0f5aab6908b90139b282a327827c6a7 66 Gene3D G3DSA:3.30.70.100 3 62 2.0E-8 T 17-10-2018 BJD13_04230 21d6b10b0e8c3d431d9c149ebb6c0440 321 Pfam PF08279 HTH domain 7 62 5.9E-11 T 17-10-2018 IPR013196 Helix-turn-helix, type 11 BJD13_04230 21d6b10b0e8c3d431d9c149ebb6c0440 321 Gene3D G3DSA:1.10.10.10 4 65 9.6E-13 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_04230 21d6b10b0e8c3d431d9c149ebb6c0440 321 Pfam PF13280 WYL domain 142 310 1.3E-20 T 17-10-2018 IPR026881 WYL domain BJD13_04230 21d6b10b0e8c3d431d9c149ebb6c0440 321 SUPERFAMILY SSF46785 6 63 6.46E-10 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_21460 60af1078c1972adc862afd9a05f954ee 283 Gene3D G3DSA:3.30.1300.30 46 92 7.6E-18 T 17-10-2018 BJD13_21460 60af1078c1972adc862afd9a05f954ee 283 SUPERFAMILY SSF158544 95 192 3.66E-23 T 17-10-2018 IPR038072 GspK, central domain superfamily BJD13_21460 60af1078c1972adc862afd9a05f954ee 283 Gene3D G3DSA:1.10.40.60 93 194 7.6E-18 T 17-10-2018 IPR038072 GspK, central domain superfamily BJD13_21460 60af1078c1972adc862afd9a05f954ee 283 Gene3D G3DSA:1.10.40.60 195 222 7.6E-18 T 17-10-2018 IPR038072 GspK, central domain superfamily BJD13_21460 60af1078c1972adc862afd9a05f954ee 283 PIRSF PIRSF002786 1 279 1.4E-54 T 17-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 BJD13_21460 60af1078c1972adc862afd9a05f954ee 283 Pfam PF03934 Type II secretion system (T2SS), protein K 31 254 1.6E-46 T 17-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 BJD13_23785 aa00d0c54aa16b8a3e9b484293285fa9 84 SUPERFAMILY SSF142921 4 73 1.96E-6 T 17-10-2018 IPR036930 WGR domain superfamily BJD13_23785 aa00d0c54aa16b8a3e9b484293285fa9 84 Pfam PF05406 WGR domain 6 73 1.8E-4 T 17-10-2018 IPR008893 WGR domain BJD13_18715 da58ed2e6bbdd28caff2036d27805875 150 TIGRFAM TIGR01754 flav_RNR: putative ribonucleotide reductase-associated flavodoxin 1 144 1.9E-58 T 17-10-2018 IPR010088 Ribonucleotide reductase-associated flavodoxin, putative BJD13_18715 da58ed2e6bbdd28caff2036d27805875 150 SUPERFAMILY SSF52218 1 147 6.98E-25 T 17-10-2018 IPR029039 Flavoprotein-like superfamily BJD13_18715 da58ed2e6bbdd28caff2036d27805875 150 Gene3D G3DSA:3.40.50.360 1 150 1.9E-18 T 17-10-2018 IPR029039 Flavoprotein-like superfamily BJD13_18715 da58ed2e6bbdd28caff2036d27805875 150 Pfam PF00258 Flavodoxin 8 123 5.1E-10 T 17-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 BJD13_04325 866a9e8ea99e5c706a00fca04965f0c9 58 Pfam PF12244 Protein of unknown function (DUF3606) 4 57 2.6E-25 T 17-10-2018 IPR022037 Protein of unknown function DUF3606 BJD13_12545 5f80977e3a39f7401d1cf01186a24efb 222 SUPERFAMILY SSF52266 42 220 1.1E-45 T 17-10-2018 BJD13_12545 5f80977e3a39f7401d1cf01186a24efb 222 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 44 204 1.7E-19 T 17-10-2018 IPR013830 SGNH hydrolase-type esterase domain BJD13_12545 5f80977e3a39f7401d1cf01186a24efb 222 Gene3D G3DSA:3.40.50.1110 41 222 2.1E-63 T 17-10-2018 IPR036514 SGNH hydrolase superfamily BJD13_17590 e547ba40335f21d146f8cf2638cdd5a6 506 PIRSF PIRSF011396 1 504 7.1E-198 T 17-10-2018 IPR033856 Flavin-dependent tryptophan halogenase BJD13_17590 e547ba40335f21d146f8cf2638cdd5a6 506 SUPERFAMILY SSF51905 8 424 4.0E-27 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_17590 e547ba40335f21d146f8cf2638cdd5a6 506 Pfam PF04820 Tryptophan halogenase 8 468 5.1E-200 T 17-10-2018 IPR006905 Flavin-dependent halogenase BJD13_17590 e547ba40335f21d146f8cf2638cdd5a6 506 Gene3D G3DSA:3.50.50.60 6 499 8.2E-191 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_21745 531c8b69b6f416d3dbef6d5e9674e488 122 Gene3D G3DSA:2.40.128.290 42 119 1.3E-40 T 17-10-2018 IPR038646 Atu4866-like superfamily BJD13_21745 531c8b69b6f416d3dbef6d5e9674e488 122 Pfam PF11512 Agrobacterium tumefaciens protein Atu4866 44 118 4.9E-39 T 17-10-2018 IPR020955 Uncharacterised protein family Atu4866 BJD13_16455 92bc122dcfedc3cb9380cfd2067a91ca 509 Gene3D G3DSA:3.40.605.10 26 495 1.3E-163 T 17-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 BJD13_16455 92bc122dcfedc3cb9380cfd2067a91ca 509 SUPERFAMILY SSF53720 16 501 6.15E-164 T 17-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BJD13_16455 92bc122dcfedc3cb9380cfd2067a91ca 509 Gene3D G3DSA:3.40.309.10 269 467 1.3E-163 T 17-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 BJD13_16455 92bc122dcfedc3cb9380cfd2067a91ca 509 Pfam PF00171 Aldehyde dehydrogenase family 30 496 3.4E-166 T 17-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 BJD13_16455 92bc122dcfedc3cb9380cfd2067a91ca 509 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 264 271 - T 17-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 BJD13_16455 92bc122dcfedc3cb9380cfd2067a91ca 509 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 297 308 - T 17-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 BJD13_12160 910e49ed5f4c5949ce23e890bf7d677b 184 Pfam PF01883 Iron-sulfur cluster assembly protein 86 160 1.8E-11 T 17-10-2018 IPR002744 MIP18 family-like BJD13_12160 910e49ed5f4c5949ce23e890bf7d677b 184 TIGRFAM TIGR03406 FeS_long_SufT: probable FeS assembly SUF system protein SufT 9 183 5.1E-82 T 17-10-2018 IPR017776 FeS assembly SUF system protein SufT, putative BJD13_12160 910e49ed5f4c5949ce23e890bf7d677b 184 SUPERFAMILY SSF117916 82 182 2.09E-26 T 17-10-2018 IPR034904 Fe-S cluster assembly domain superfamily BJD13_12160 910e49ed5f4c5949ce23e890bf7d677b 184 Gene3D G3DSA:3.30.300.130 75 183 1.8E-33 T 17-10-2018 IPR034904 Fe-S cluster assembly domain superfamily BJD13_19530 e5e28fac075b34377f5539d5a2da9be5 291 Gene3D G3DSA:1.20.120.80 75 291 1.7E-67 T 17-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_19530 e5e28fac075b34377f5539d5a2da9be5 291 Pfam PF00510 Cytochrome c oxidase subunit III 150 290 4.2E-44 T 17-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_19530 e5e28fac075b34377f5539d5a2da9be5 291 Pfam PF00510 Cytochrome c oxidase subunit III 10 112 4.1E-16 T 17-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_19530 e5e28fac075b34377f5539d5a2da9be5 291 SUPERFAMILY SSF81452 9 291 6.8E-84 T 17-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_19530 e5e28fac075b34377f5539d5a2da9be5 291 Gene3D G3DSA:1.10.287.70 1 74 2.5E-22 T 17-10-2018 BJD13_02125 17cdb61024fc2c80471cf4833e3d0e6d 177 Gene3D G3DSA:2.40.50.140 1 118 3.4E-43 T 17-10-2018 BJD13_02125 17cdb61024fc2c80471cf4833e3d0e6d 177 Pfam PF00436 Single-strand binding protein family 5 108 5.5E-39 T 17-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 BJD13_02125 17cdb61024fc2c80471cf4833e3d0e6d 177 Hamap MF_00984 Single-stranded DNA-binding protein. 5 112 36.083 T 17-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 BJD13_02125 17cdb61024fc2c80471cf4833e3d0e6d 177 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 177 2.4E-49 T 17-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 BJD13_02125 17cdb61024fc2c80471cf4833e3d0e6d 177 SUPERFAMILY SSF50249 3 177 2.95E-56 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD13_02125 17cdb61024fc2c80471cf4833e3d0e6d 177 PIRSF PIRSF002070 1 116 7.6E-34 T 17-10-2018 BJD13_02125 17cdb61024fc2c80471cf4833e3d0e6d 177 PIRSF PIRSF002070 147 176 770.0 T 17-10-2018 BJD13_14820 126c61688fb6beb45af194491a5c21dc 187 Pfam PF01464 Transglycosylase SLT domain 66 162 3.6E-18 T 17-10-2018 IPR008258 Transglycosylase SLT domain 1 BJD13_14820 126c61688fb6beb45af194491a5c21dc 187 Gene3D G3DSA:1.10.530.10 61 176 1.0E-16 T 17-10-2018 BJD13_14820 126c61688fb6beb45af194491a5c21dc 187 SUPERFAMILY SSF53955 56 182 7.35E-41 T 17-10-2018 IPR023346 Lysozyme-like domain superfamily BJD13_12030 5daff5b26529cf119f7cac09b035fcc9 193 Gene3D G3DSA:3.40.50.1470 1 193 2.8E-62 T 17-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 BJD13_12030 5daff5b26529cf119f7cac09b035fcc9 193 SUPERFAMILY SSF53178 5 189 1.23E-64 T 17-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 BJD13_12030 5daff5b26529cf119f7cac09b035fcc9 193 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 4 182 33.686 T 17-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 BJD13_12030 5daff5b26529cf119f7cac09b035fcc9 193 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 17 30 - T 17-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 BJD13_12030 5daff5b26529cf119f7cac09b035fcc9 193 Pfam PF01195 Peptidyl-tRNA hydrolase 6 188 1.3E-50 T 17-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 BJD13_12030 5daff5b26529cf119f7cac09b035fcc9 193 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 5 189 2.5E-57 T 17-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 BJD13_13240 3e5e6b3dbe83c09197801958d63f0e49 286 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 176 278 1.5E-17 T 17-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 BJD13_13240 3e5e6b3dbe83c09197801958d63f0e49 286 Gene3D G3DSA:2.60.120.620 93 278 2.2E-57 T 17-10-2018 BJD13_13240 3e5e6b3dbe83c09197801958d63f0e49 286 SMART SM00702 96 278 3.1E-44 T 17-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 BJD13_04995 ea99f28da52ac6e292771af23ef81ff1 301 SUPERFAMILY SSF53850 92 298 4.16E-39 T 17-10-2018 BJD13_04995 ea99f28da52ac6e292771af23ef81ff1 301 Pfam PF03466 LysR substrate binding domain 90 295 9.8E-40 T 17-10-2018 IPR005119 LysR, substrate-binding BJD13_04995 ea99f28da52ac6e292771af23ef81ff1 301 Gene3D G3DSA:3.40.190.10 165 267 4.6E-49 T 17-10-2018 BJD13_04995 ea99f28da52ac6e292771af23ef81ff1 301 Gene3D G3DSA:1.10.10.10 5 91 1.2E-22 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_04995 ea99f28da52ac6e292771af23ef81ff1 301 SUPERFAMILY SSF46785 9 112 2.64E-20 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_04995 ea99f28da52ac6e292771af23ef81ff1 301 Gene3D G3DSA:3.40.190.10 93 290 4.6E-49 T 17-10-2018 BJD13_04995 ea99f28da52ac6e292771af23ef81ff1 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 65 9.7E-19 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_23570 0eaee4826a22073a3b568eeaf872a6d1 472 PIRSF PIRSF000521 38 440 4.8E-29 T 17-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BJD13_23570 0eaee4826a22073a3b568eeaf872a6d1 472 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 31 465 1.1E-166 T 17-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 BJD13_23570 0eaee4826a22073a3b568eeaf872a6d1 472 Gene3D G3DSA:3.40.640.10 82 363 2.2E-154 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD13_23570 0eaee4826a22073a3b568eeaf872a6d1 472 Gene3D G3DSA:3.90.1150.10 30 455 2.2E-154 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD13_23570 0eaee4826a22073a3b568eeaf872a6d1 472 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 274 311 - T 17-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BJD13_23570 0eaee4826a22073a3b568eeaf872a6d1 472 Pfam PF00202 Aminotransferase class-III 46 465 9.7E-117 T 17-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BJD13_23570 0eaee4826a22073a3b568eeaf872a6d1 472 SUPERFAMILY SSF53383 27 466 2.8E-125 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD13_03385 2bde8c6e6e5cad25dabf2efc84fd2873 346 Gene3D G3DSA:3.30.450.90 20 125 7.7E-32 T 17-10-2018 BJD13_03385 2bde8c6e6e5cad25dabf2efc84fd2873 346 TIGRFAM TIGR02788 VirB11: P-type DNA transfer ATPase VirB11 28 337 8.5E-137 T 17-10-2018 IPR014155 Type IV secretion system protein VirB11 GO:0043684|GO:0044097 BJD13_03385 2bde8c6e6e5cad25dabf2efc84fd2873 346 Gene3D G3DSA:3.40.50.300 127 344 7.3E-65 T 17-10-2018 BJD13_03385 2bde8c6e6e5cad25dabf2efc84fd2873 346 SUPERFAMILY SSF52540 2 325 9.07E-45 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_03385 2bde8c6e6e5cad25dabf2efc84fd2873 346 Pfam PF00437 Type II/IV secretion system protein 28 325 1.5E-54 T 17-10-2018 IPR001482 Type II/IV secretion system protein BJD13_18505 8702fca84eb66cf205790bbf4c3bbf85 299 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 164 188 - T 17-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BJD13_18505 8702fca84eb66cf205790bbf4c3bbf85 299 PRINTS PR00073 Coprogen oxidase signature 160 189 4.0E-83 T 17-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BJD13_18505 8702fca84eb66cf205790bbf4c3bbf85 299 PRINTS PR00073 Coprogen oxidase signature 29 45 4.0E-83 T 17-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BJD13_18505 8702fca84eb66cf205790bbf4c3bbf85 299 PRINTS PR00073 Coprogen oxidase signature 259 285 4.0E-83 T 17-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BJD13_18505 8702fca84eb66cf205790bbf4c3bbf85 299 PRINTS PR00073 Coprogen oxidase signature 123 145 4.0E-83 T 17-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BJD13_18505 8702fca84eb66cf205790bbf4c3bbf85 299 PRINTS PR00073 Coprogen oxidase signature 88 112 4.0E-83 T 17-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BJD13_18505 8702fca84eb66cf205790bbf4c3bbf85 299 PRINTS PR00073 Coprogen oxidase signature 231 258 4.0E-83 T 17-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BJD13_18505 8702fca84eb66cf205790bbf4c3bbf85 299 PRINTS PR00073 Coprogen oxidase signature 46 67 4.0E-83 T 17-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BJD13_18505 8702fca84eb66cf205790bbf4c3bbf85 299 Gene3D G3DSA:3.40.1500.10 1 298 2.0E-130 T 17-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BJD13_18505 8702fca84eb66cf205790bbf4c3bbf85 299 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 1 274 57.313 T 17-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BJD13_18505 8702fca84eb66cf205790bbf4c3bbf85 299 PIRSF PIRSF000166 2 299 7.4E-123 T 17-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BJD13_18505 8702fca84eb66cf205790bbf4c3bbf85 299 Pfam PF01218 Coproporphyrinogen III oxidase 6 298 4.6E-130 T 17-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BJD13_18505 8702fca84eb66cf205790bbf4c3bbf85 299 SUPERFAMILY SSF102886 5 297 5.49E-131 T 17-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BJD13_08685 a900fea8ad65c520f4c5faff00c13e9b 232 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 18 135 6.0E-28 T 17-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 BJD13_08685 a900fea8ad65c520f4c5faff00c13e9b 232 Gene3D G3DSA:3.10.50.40 130 232 2.8E-14 T 17-10-2018 BJD13_08685 a900fea8ad65c520f4c5faff00c13e9b 232 SUPERFAMILY SSF54534 27 232 1.73E-33 T 17-10-2018 BJD13_08685 a900fea8ad65c520f4c5faff00c13e9b 232 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 181 229 3.5E-7 T 17-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain BJD13_08685 a900fea8ad65c520f4c5faff00c13e9b 232 Gene3D G3DSA:1.10.287.460 19 129 8.2E-26 T 17-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 BJD13_05040 63b0934dbb63a1c7abcff61d0ba7f08b 376 TIGRFAM TIGR00698 TIGR00698: conserved hypothetical protein 23 373 1.5E-110 T 17-10-2018 IPR004630 Uncharacterised protein family UPF0324, bacteria GO:0016021 BJD13_05040 63b0934dbb63a1c7abcff61d0ba7f08b 376 Pfam PF03601 Conserved hypothetical protein 698 27 353 4.3E-104 T 17-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 BJD13_03560 428f280be76340e7b56e2dd05c6a9ec0 484 Pfam PF02397 Bacterial sugar transferase 293 478 9.9E-64 T 17-10-2018 IPR003362 Bacterial sugar transferase BJD13_03560 428f280be76340e7b56e2dd05c6a9ec0 484 Pfam PF13727 CoA-binding domain 77 255 3.3E-32 T 17-10-2018 BJD13_03560 428f280be76340e7b56e2dd05c6a9ec0 484 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 33 484 3.1E-156 T 17-10-2018 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 BJD13_03560 428f280be76340e7b56e2dd05c6a9ec0 484 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 32 484 8.4E-147 T 17-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase BJD13_03560 428f280be76340e7b56e2dd05c6a9ec0 484 Gene3D G3DSA:3.40.50.720 155 278 2.6E-12 T 17-10-2018 BJD13_13355 9774a06b7fd29935ddf7c3c3c297cf92 337 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 49 86 1.5E-8 T 17-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 BJD13_13355 9774a06b7fd29935ddf7c3c3c297cf92 337 Hamap MF_00206 Lipoyl synthase [lipA]. 50 337 150.836 T 17-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 BJD13_13355 9774a06b7fd29935ddf7c3c3c297cf92 337 PIRSF PIRSF005963 1 336 4.8E-138 T 17-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 BJD13_13355 9774a06b7fd29935ddf7c3c3c297cf92 337 SMART SM00729 97 305 2.2E-18 T 17-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 BJD13_13355 9774a06b7fd29935ddf7c3c3c297cf92 337 TIGRFAM TIGR00510 lipA: lipoyl synthase 48 330 6.4E-132 T 17-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 BJD13_13355 9774a06b7fd29935ddf7c3c3c297cf92 337 Gene3D G3DSA:3.20.20.70 92 305 6.9E-22 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD13_13355 9774a06b7fd29935ddf7c3c3c297cf92 337 Pfam PF04055 Radical SAM superfamily 103 267 6.5E-15 T 17-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BJD13_13355 9774a06b7fd29935ddf7c3c3c297cf92 337 SUPERFAMILY SSF102114 66 329 6.15E-64 T 17-10-2018 BJD13_03755 2523be1922126c25d6061a2495789529 538 SUPERFAMILY SSF53720 30 490 1.83E-72 T 17-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BJD13_03755 2523be1922126c25d6061a2495789529 538 Gene3D G3DSA:3.40.309.10 271 461 1.8E-142 T 17-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 BJD13_03755 2523be1922126c25d6061a2495789529 538 Pfam PF00171 Aldehyde dehydrogenase family 26 429 3.6E-44 T 17-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 BJD13_03755 2523be1922126c25d6061a2495789529 538 Gene3D G3DSA:3.40.605.10 53 527 1.8E-142 T 17-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 BJD13_21650 22cc4ad8b08c439832894f576e4f4362 258 Gene3D G3DSA:3.20.20.370 62 255 4.8E-47 T 17-10-2018 BJD13_21650 22cc4ad8b08c439832894f576e4f4362 258 Pfam PF01522 Polysaccharide deacetylase 75 193 1.0E-30 T 17-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 BJD13_21650 22cc4ad8b08c439832894f576e4f4362 258 SUPERFAMILY SSF88713 66 252 2.03E-49 T 17-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 BJD13_00525 e2b552cda5de2a94ada558ec977a96d7 205 Pfam PF01545 Cation efflux family 19 193 1.5E-22 T 17-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 BJD13_00525 e2b552cda5de2a94ada558ec977a96d7 205 SUPERFAMILY SSF161111 13 195 7.59E-39 T 17-10-2018 IPR027469 Cation efflux transmembrane domain superfamily BJD13_00525 e2b552cda5de2a94ada558ec977a96d7 205 Gene3D G3DSA:1.20.1510.10 15 196 3.7E-16 T 17-10-2018 IPR027469 Cation efflux transmembrane domain superfamily BJD13_21305 d445d957e4cec099e4734e03b9495623 257 Pfam PF01066 CDP-alcohol phosphatidyltransferase 16 79 1.0E-14 T 17-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 BJD13_21305 d445d957e4cec099e4734e03b9495623 257 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 23 192 7.5E-34 T 17-10-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 BJD13_21305 d445d957e4cec099e4734e03b9495623 257 Gene3D G3DSA:1.20.120.1760 10 193 1.4E-12 T 17-10-2018 BJD13_21305 d445d957e4cec099e4734e03b9495623 257 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 57 79 - T 17-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 BJD13_02630 127f8fc6cb64cadd001dd4915ad83f3c 199 Gene3D G3DSA:3.10.290.30 15 192 9.5E-42 T 17-10-2018 IPR024047 MM3350-like superfamily BJD13_02630 127f8fc6cb64cadd001dd4915ad83f3c 199 Pfam PF07929 Plasmid pRiA4b ORF-3-like protein 20 188 2.2E-40 T 17-10-2018 IPR012912 Plasmid pRiA4b, Orf3 BJD13_02630 127f8fc6cb64cadd001dd4915ad83f3c 199 SUPERFAMILY SSF159941 19 191 1.7E-44 T 17-10-2018 IPR024047 MM3350-like superfamily BJD13_13265 b2ffca12f19ba6090eff33455f3efca3 171 Gene3D G3DSA:3.30.70.560 1 154 1.4E-35 T 17-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 BJD13_13265 b2ffca12f19ba6090eff33455f3efca3 171 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 6 130 4.6E-24 T 17-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 BJD13_13265 b2ffca12f19ba6090eff33455f3efca3 171 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 130 7.3E-29 T 17-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 BJD13_13265 b2ffca12f19ba6090eff33455f3efca3 171 SUPERFAMILY SSF55083 1 151 4.97E-39 T 17-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 BJD13_22235 ede85caddff1856a7d415b73b51d5b53 260 Pfam PF05137 Fimbrial assembly protein (PilN) 100 189 1.4E-27 T 17-10-2018 IPR007813 Fimbrial assembly PilN BJD13_01755 dbf968e2f61d1efdc6eeb6703461fb19 130 SUPERFAMILY SSF53062 4 124 1.44E-23 T 17-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 BJD13_01755 dbf968e2f61d1efdc6eeb6703461fb19 130 Pfam PF03610 PTS system fructose IIA component 4 103 9.1E-13 T 17-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 BJD13_01755 dbf968e2f61d1efdc6eeb6703461fb19 130 Gene3D G3DSA:3.40.50.510 3 129 1.9E-23 T 17-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 BJD13_00050 4500e3608afdbe49e96e43f7a6bbc0e5 211 Pfam PF09436 Domain of unknown function (DUF2016) 15 74 6.1E-8 T 17-10-2018 IPR018560 Domain of unknown function DUF2016 BJD13_00050 4500e3608afdbe49e96e43f7a6bbc0e5 211 TIGRFAM TIGR03735 PRTRC_A: PRTRC system protein A 15 200 2.2E-34 T 17-10-2018 IPR022499 ParB-related, ThiF-related cassette, protein A BJD13_00050 4500e3608afdbe49e96e43f7a6bbc0e5 211 Pfam PF14464 Prokaryotic homologs of the JAB domain 87 176 5.5E-10 T 17-10-2018 IPR028090 JAB domain, prokaryotic BJD13_03320 c2abd0beb2df6a8476923829c40c1d56 1236 Pfam PF05567 Neisseria PilC beta-propeller domain 759 1070 2.4E-55 T 17-10-2018 IPR008707 PilC beta-propeller domain BJD13_03320 c2abd0beb2df6a8476923829c40c1d56 1236 SUPERFAMILY SSF50998 787 1162 1.04E-5 T 17-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily BJD13_09600 1c3be9727461f81d9c9665128d3a0ef5 645 Pfam PF05960 Bacterial protein of unknown function (DUF885) 101 636 1.1E-169 T 17-10-2018 IPR010281 Protein of unknown function DUF885 BJD13_03605 7cc958aad3e3737d5fc72cfd74f4a693 264 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 81 245 5.8E-51 T 17-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 BJD13_03605 7cc958aad3e3737d5fc72cfd74f4a693 264 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 80 246 2.5E-31 T 17-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 BJD13_01935 49619d0a7364ab154424c116bbc4034c 772 Gene3D G3DSA:2.170.130.10 42 169 1.1E-34 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_01935 49619d0a7364ab154424c116bbc4034c 772 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 157 9.4E-18 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_01935 49619d0a7364ab154424c116bbc4034c 772 SUPERFAMILY SSF56935 29 772 8.93E-120 T 17-10-2018 BJD13_01935 49619d0a7364ab154424c116bbc4034c 772 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 60 772 4.2E-73 T 17-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 BJD13_01935 49619d0a7364ab154424c116bbc4034c 772 Gene3D G3DSA:2.40.170.20 171 772 8.1E-114 T 17-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BJD13_01935 49619d0a7364ab154424c116bbc4034c 772 Pfam PF00593 TonB dependent receptor 241 771 1.6E-46 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_04575 268df630358e0bb3ff7c8aae1d11d99d 271 Pfam PF05985 Ethanolamine ammonia-lyase light chain (EutC) 10 247 9.2E-95 T 17-10-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 BJD13_04575 268df630358e0bb3ff7c8aae1d11d99d 271 Gene3D G3DSA:3.40.50.11240 65 246 8.5E-68 T 17-10-2018 BJD13_04575 268df630358e0bb3ff7c8aae1d11d99d 271 Hamap MF_00601 Ethanolamine ammonia-lyase light chain [eutC]. 2 247 40.726 T 17-10-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 BJD13_04575 268df630358e0bb3ff7c8aae1d11d99d 271 PIRSF PIRSF018982 2 257 5.1E-103 T 17-10-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 BJD13_04575 268df630358e0bb3ff7c8aae1d11d99d 271 Gene3D G3DSA:1.10.30.40 4 53 2.9E-9 T 17-10-2018 BJD13_11600 9552dabb05943a41da580bd0986d3151 281 Pfam PF04305 Protein of unknown function (DUF455) 28 273 1.4E-99 T 17-10-2018 IPR007402 Protein of unknown function DUF455 BJD13_11600 9552dabb05943a41da580bd0986d3151 281 SUPERFAMILY SSF47240 76 277 8.12E-21 T 17-10-2018 IPR009078 Ferritin-like superfamily BJD13_11600 9552dabb05943a41da580bd0986d3151 281 PIRSF PIRSF012318 12 281 8.7E-107 T 17-10-2018 IPR011197 Uncharacterised conserved protein UCP012318 BJD13_19455 7f451b11fe4b99554fcab14291f3c7a7 431 SUPERFAMILY SSF103473 21 427 3.27E-33 T 17-10-2018 IPR036259 MFS transporter superfamily BJD13_19455 7f451b11fe4b99554fcab14291f3c7a7 431 Gene3D G3DSA:1.20.1250.20 231 424 9.2E-10 T 17-10-2018 BJD13_19455 7f451b11fe4b99554fcab14291f3c7a7 431 Gene3D G3DSA:1.20.1250.20 14 213 8.6E-13 T 17-10-2018 BJD13_19455 7f451b11fe4b99554fcab14291f3c7a7 431 Pfam PF07690 Major Facilitator Superfamily 28 381 9.2E-20 T 17-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD13_14060 6ef76a59a917bf815ba08c32f3ef38c2 105 TIGRFAM TIGR03130 malonate_delta: malonate decarboxylase acyl carrier protein 2 99 2.5E-37 T 17-10-2018 IPR009662 Malonate decarboxylase delta subunit BJD13_14060 6ef76a59a917bf815ba08c32f3ef38c2 105 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 20 98 5.4E-25 T 17-10-2018 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein BJD13_14060 6ef76a59a917bf815ba08c32f3ef38c2 105 ProDom PD015450 MALONATE DECARBOXYLASE SUBUNIT DELTA ACYL CARRIER DECARBOXYLASE PLASMID DIRECT SEQUENCING 1 99 3.0E-50 T 17-10-2018 IPR009662 Malonate decarboxylase delta subunit BJD13_14060 6ef76a59a917bf815ba08c32f3ef38c2 105 Hamap MF_00710 Malonate decarboxylase acyl carrier protein [mdcC]. 1 104 54.488 T 17-10-2018 IPR009662 Malonate decarboxylase delta subunit BJD13_20445 4003a00af0b7e4f5c9f8a0b9142df7e7 383 Gene3D G3DSA:3.20.20.80 18 354 8.1E-27 T 17-10-2018 BJD13_20445 4003a00af0b7e4f5c9f8a0b9142df7e7 383 SUPERFAMILY SSF51445 6 352 7.15E-51 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily BJD13_12225 df8cdba07191c28c10e1a529b0a1e2c0 262 Pfam PF05013 N-formylglutamate amidohydrolase 27 234 1.7E-47 T 17-10-2018 IPR007709 N-formylglutamate amidohydrolase BJD13_12225 df8cdba07191c28c10e1a529b0a1e2c0 262 SUPERFAMILY SSF53187 10 256 5.02E-79 T 17-10-2018 BJD13_12225 df8cdba07191c28c10e1a529b0a1e2c0 262 PIRSF PIRSF029730 5 261 5.7E-103 T 17-10-2018 IPR011227 Uncharacterised conserved protein UCP029730 BJD13_12225 df8cdba07191c28c10e1a529b0a1e2c0 262 Gene3D G3DSA:3.40.630.40 18 257 5.0E-87 T 17-10-2018 BJD13_01430 5ad32d36a77468e7774c3a4a41a4b01f 154 Pfam PF11000 Protein of unknown function (DUF2840) 8 106 1.4E-15 T 17-10-2018 IPR021263 Protein of unknown function DUF2840 BJD13_16380 aaff17348d6bc97e6c80330aa4f573fe 402 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 396 56.192 T 17-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BJD13_16380 aaff17348d6bc97e6c80330aa4f573fe 402 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 79 1.5E-34 T 17-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BJD13_16380 aaff17348d6bc97e6c80330aa4f573fe 402 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 318 4.7E-109 T 17-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BJD13_16380 aaff17348d6bc97e6c80330aa4f573fe 402 Gene3D G3DSA:3.40.50.720 1 400 6.0E-174 T 17-10-2018 BJD13_16380 aaff17348d6bc97e6c80330aa4f573fe 402 Pfam PF07055 Enoyl reductase FAD binding domain 327 390 7.7E-31 T 17-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BJD13_21465 a8457a70b8eaacf23c31eb76bca80680 373 Pfam PF05137 Fimbrial assembly protein (PilN) 287 358 1.0E-13 T 17-10-2018 IPR007813 Fimbrial assembly PilN BJD13_21465 a8457a70b8eaacf23c31eb76bca80680 373 SUPERFAMILY SSF53067 86 184 1.09E-6 T 17-10-2018 BJD13_21465 a8457a70b8eaacf23c31eb76bca80680 373 Gene3D G3DSA:3.30.1490.300 107 163 1.9E-5 T 17-10-2018 BJD13_14990 3c0e605808696d951ce719b1d9fb8844 243 Pfam PF00156 Phosphoribosyl transferase domain 154 238 5.3E-7 T 17-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 BJD13_14990 3c0e605808696d951ce719b1d9fb8844 243 Gene3D G3DSA:3.40.50.2020 100 243 5.3E-17 T 17-10-2018 BJD13_14990 3c0e605808696d951ce719b1d9fb8844 243 SUPERFAMILY SSF53271 66 242 1.14E-31 T 17-10-2018 IPR029057 Phosphoribosyltransferase-like BJD13_19340 755dad65d783b2c7f6cf28d844a1528d 628 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 73 339 1.9E-44 T 17-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 BJD13_19340 755dad65d783b2c7f6cf28d844a1528d 628 SUPERFAMILY SSF51419 64 341 8.41E-62 T 17-10-2018 IPR029066 PLP-binding barrel BJD13_19340 755dad65d783b2c7f6cf28d844a1528d 628 PRINTS PR01180 Arginine decarboxylase signature 64 79 2.3E-67 T 17-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 BJD13_19340 755dad65d783b2c7f6cf28d844a1528d 628 PRINTS PR01180 Arginine decarboxylase signature 168 189 2.3E-67 T 17-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 BJD13_19340 755dad65d783b2c7f6cf28d844a1528d 628 PRINTS PR01180 Arginine decarboxylase signature 534 555 2.3E-67 T 17-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 BJD13_19340 755dad65d783b2c7f6cf28d844a1528d 628 PRINTS PR01180 Arginine decarboxylase signature 456 477 2.3E-67 T 17-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 BJD13_19340 755dad65d783b2c7f6cf28d844a1528d 628 PRINTS PR01180 Arginine decarboxylase signature 88 102 2.3E-67 T 17-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 BJD13_19340 755dad65d783b2c7f6cf28d844a1528d 628 PRINTS PR01180 Arginine decarboxylase signature 142 157 2.3E-67 T 17-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 BJD13_19340 755dad65d783b2c7f6cf28d844a1528d 628 PRINTS PR01180 Arginine decarboxylase signature 192 214 2.3E-67 T 17-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 BJD13_19340 755dad65d783b2c7f6cf28d844a1528d 628 PRINTS PR01180 Arginine decarboxylase signature 481 506 2.3E-67 T 17-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 BJD13_19340 755dad65d783b2c7f6cf28d844a1528d 628 PRINTS PR01180 Arginine decarboxylase signature 319 336 2.3E-67 T 17-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 BJD13_19340 755dad65d783b2c7f6cf28d844a1528d 628 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 270 286 - T 17-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site BJD13_19340 755dad65d783b2c7f6cf28d844a1528d 628 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 2 624 42.62 T 17-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 BJD13_19340 755dad65d783b2c7f6cf28d844a1528d 628 SUPERFAMILY SSF50621 448 556 1.36E-6 T 17-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 BJD13_19340 755dad65d783b2c7f6cf28d844a1528d 628 Gene3D G3DSA:2.40.37.10 13 561 6.2E-215 T 17-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 BJD13_19340 755dad65d783b2c7f6cf28d844a1528d 628 Gene3D G3DSA:1.20.58.930 361 452 6.2E-215 T 17-10-2018 BJD13_19340 755dad65d783b2c7f6cf28d844a1528d 628 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 329 348 4.7E-15 T 17-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BJD13_19340 755dad65d783b2c7f6cf28d844a1528d 628 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 235 248 4.7E-15 T 17-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BJD13_19340 755dad65d783b2c7f6cf28d844a1528d 628 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 534 547 4.7E-15 T 17-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BJD13_19340 755dad65d783b2c7f6cf28d844a1528d 628 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 96 114 4.7E-15 T 17-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BJD13_19340 755dad65d783b2c7f6cf28d844a1528d 628 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 119 131 4.7E-15 T 17-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BJD13_19340 755dad65d783b2c7f6cf28d844a1528d 628 Gene3D G3DSA:3.20.20.10 65 344 6.2E-215 T 17-10-2018 IPR029066 PLP-binding barrel BJD13_19340 755dad65d783b2c7f6cf28d844a1528d 628 PIRSF PIRSF001336 1 625 5.1E-238 T 17-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 BJD13_19340 755dad65d783b2c7f6cf28d844a1528d 628 TIGRFAM TIGR01273 speA: arginine decarboxylase 4 623 1.8E-259 T 17-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 BJD13_12085 d974ecca30d1c31a87335f3c487b7a95 172 Gene3D G3DSA:3.40.980.10 3 168 2.2E-47 T 17-10-2018 IPR036425 MoaB/Mog-like domain superfamily BJD13_12085 d974ecca30d1c31a87335f3c487b7a95 172 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 10 151 7.1E-34 T 17-10-2018 IPR001453 MoaB/Mog domain BJD13_12085 d974ecca30d1c31a87335f3c487b7a95 172 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 6 167 2.9E-83 T 17-10-2018 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 BJD13_12085 d974ecca30d1c31a87335f3c487b7a95 172 PIRSF PIRSF006443 1 165 1.3E-62 T 17-10-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 BJD13_12085 d974ecca30d1c31a87335f3c487b7a95 172 SUPERFAMILY SSF53218 7 166 2.09E-43 T 17-10-2018 IPR036425 MoaB/Mog-like domain superfamily BJD13_12085 d974ecca30d1c31a87335f3c487b7a95 172 Pfam PF00994 Probable molybdopterin binding domain 14 154 3.4E-31 T 17-10-2018 IPR001453 MoaB/Mog domain BJD13_12085 d974ecca30d1c31a87335f3c487b7a95 172 SMART SM00852 13 157 1.5E-28 T 17-10-2018 IPR001453 MoaB/Mog domain BJD13_09515 82522b94a46e4e54cf6f5e8fcfdcc3ea 152 Pfam PF07977 FabA-like domain 19 144 1.6E-39 T 17-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BJD13_09515 82522b94a46e4e54cf6f5e8fcfdcc3ea 152 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 10 152 34.01 T 17-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BJD13_09515 82522b94a46e4e54cf6f5e8fcfdcc3ea 152 SUPERFAMILY SSF54637 13 150 1.26E-44 T 17-10-2018 IPR029069 HotDog domain superfamily BJD13_09515 82522b94a46e4e54cf6f5e8fcfdcc3ea 152 Gene3D G3DSA:3.10.129.10 3 151 1.9E-56 T 17-10-2018 BJD13_09515 82522b94a46e4e54cf6f5e8fcfdcc3ea 152 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 10 149 1.9E-60 T 17-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BJD13_21280 7d891b0f995b591173f9b8b2fc886256 370 Pfam PF02405 Permease MlaE 154 362 1.8E-67 T 17-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 BJD13_21280 7d891b0f995b591173f9b8b2fc886256 370 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 129 366 1.6E-70 T 17-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria BJD13_19350 3a83967f41a27881670b18040f549178 443 SUPERFAMILY SSF53756 14 421 4.19E-82 T 17-10-2018 BJD13_19350 3a83967f41a27881670b18040f549178 443 Gene3D G3DSA:3.40.50.2000 233 405 5.6E-108 T 17-10-2018 BJD13_19350 3a83967f41a27881670b18040f549178 443 Gene3D G3DSA:3.40.50.2000 14 406 5.6E-108 T 17-10-2018 BJD13_19350 3a83967f41a27881670b18040f549178 443 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 14 74 3.7E-9 T 17-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BJD13_13330 7a7388decf03f96e2f0689fafd281c65 351 Gene3D G3DSA:3.90.79.10 207 348 3.4E-42 T 17-10-2018 BJD13_13330 7a7388decf03f96e2f0689fafd281c65 351 SUPERFAMILY SSF52374 9 180 5.91E-21 T 17-10-2018 BJD13_13330 7a7388decf03f96e2f0689fafd281c65 351 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 9 62 7.8E-11 T 17-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 BJD13_13330 7a7388decf03f96e2f0689fafd281c65 351 Pfam PF00293 NUDIX domain 219 335 2.7E-15 T 17-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 BJD13_13330 7a7388decf03f96e2f0689fafd281c65 351 Pfam PF01467 Cytidylyltransferase-like 9 68 8.0E-10 T 17-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 BJD13_13330 7a7388decf03f96e2f0689fafd281c65 351 ProSitePatterns PS00893 Nudix box signature. 245 266 - T 17-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 BJD13_13330 7a7388decf03f96e2f0689fafd281c65 351 SUPERFAMILY SSF55811 204 349 1.76E-29 T 17-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BJD13_13330 7a7388decf03f96e2f0689fafd281c65 351 Gene3D G3DSA:3.40.50.620 1 206 2.1E-57 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD13_07980 aac8bdc99c2484bc7b7af98206693276 180 SUPERFAMILY SSF160443 94 176 2.88E-16 T 17-10-2018 IPR036063 Smr domain superfamily BJD13_07980 aac8bdc99c2484bc7b7af98206693276 180 SMART SM00463 93 177 1.5E-13 T 17-10-2018 IPR002625 Smr domain BJD13_07980 aac8bdc99c2484bc7b7af98206693276 180 Gene3D G3DSA:3.30.1370.110 46 180 4.6E-41 T 17-10-2018 BJD13_07980 aac8bdc99c2484bc7b7af98206693276 180 Pfam PF01713 Smr domain 96 176 1.6E-21 T 17-10-2018 IPR002625 Smr domain BJD13_22605 919342ac051017512ab4be040a70a01d 113 Pfam PF00355 Rieske [2Fe-2S] domain 28 96 3.0E-11 T 17-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 BJD13_22605 919342ac051017512ab4be040a70a01d 113 Gene3D G3DSA:2.102.10.10 5 113 4.0E-16 T 17-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 BJD13_22605 919342ac051017512ab4be040a70a01d 113 SUPERFAMILY SSF50022 7 112 4.32E-22 T 17-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 BJD13_08585 ffb995ea39384adb884e925e76080750 726 Pfam PF13515 Fusaric acid resistance protein-like 401 524 4.4E-16 T 17-10-2018 BJD13_08585 ffb995ea39384adb884e925e76080750 726 Pfam PF12805 FUSC-like inner membrane protein yccS 84 196 9.3E-6 T 17-10-2018 IPR032692 Integral membrane protein YccS, N-terminal BJD13_07220 5a54ac08bcaaceb01daa359249d7bac0 482 PIRSF PIRSF001549 1 467 7.6E-137 T 17-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 BJD13_07220 5a54ac08bcaaceb01daa359249d7bac0 482 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 455 8.5E-119 T 17-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 BJD13_07220 5a54ac08bcaaceb01daa359249d7bac0 482 Pfam PF13393 Histidyl-tRNA synthetase 90 357 3.8E-28 T 17-10-2018 BJD13_07220 5a54ac08bcaaceb01daa359249d7bac0 482 SUPERFAMILY SSF52954 373 464 1.6E-20 T 17-10-2018 BJD13_07220 5a54ac08bcaaceb01daa359249d7bac0 482 SUPERFAMILY SSF55681 4 367 2.19E-70 T 17-10-2018 BJD13_07220 5a54ac08bcaaceb01daa359249d7bac0 482 Gene3D G3DSA:3.30.930.10 1 370 5.5E-105 T 17-10-2018 BJD13_07220 5a54ac08bcaaceb01daa359249d7bac0 482 Pfam PF03129 Anticodon binding domain 376 464 9.0E-13 T 17-10-2018 IPR004154 Anticodon-binding BJD13_07220 5a54ac08bcaaceb01daa359249d7bac0 482 Gene3D G3DSA:3.40.50.800 372 467 2.0E-22 T 17-10-2018 IPR036621 Anticodon-binding domain superfamily BJD13_07220 5a54ac08bcaaceb01daa359249d7bac0 482 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 2 465 28.561 T 17-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 BJD13_13345 9ea002db7672da4d62367f81334dba29 247 Pfam PF01925 Sulfite exporter TauE/SafE 12 240 2.9E-30 T 17-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 BJD13_21095 339cad360981cadd5577b0d42dd5de87 329 Gene3D G3DSA:3.90.850.10 1 327 1.4E-130 T 17-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 BJD13_21095 339cad360981cadd5577b0d42dd5de87 329 SUPERFAMILY SSF56529 77 323 3.27E-54 T 17-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 BJD13_21095 339cad360981cadd5577b0d42dd5de87 329 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 82 323 3.1E-36 T 17-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 BJD13_07990 3422e9c5dae88ee807ead90eda55fd66 166 SUPERFAMILY SSF69765 4 160 2.75E-64 T 17-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 BJD13_07990 3422e9c5dae88ee807ead90eda55fd66 166 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 39 54 - T 17-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 BJD13_07990 3422e9c5dae88ee807ead90eda55fd66 166 Gene3D G3DSA:3.30.1330.50 3 165 6.5E-66 T 17-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 BJD13_07990 3422e9c5dae88ee807ead90eda55fd66 166 Pfam PF02542 YgbB family 5 158 5.5E-63 T 17-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 BJD13_07990 3422e9c5dae88ee807ead90eda55fd66 166 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 6 159 3.8E-68 T 17-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 BJD13_07990 3422e9c5dae88ee807ead90eda55fd66 166 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 5 160 35.436 T 17-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 BJD13_13415 a9a8848193a6e679107779bc7b3cebdc 161 Pfam PF04093 rod shape-determining protein MreD 3 152 8.1E-33 T 17-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 BJD13_13415 a9a8848193a6e679107779bc7b3cebdc 161 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 6 151 1.3E-32 T 17-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 BJD13_13415 a9a8848193a6e679107779bc7b3cebdc 161 PIRSF PIRSF018472 1 159 3.6E-51 T 17-10-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type BJD13_19925 4f65348ba09b40e41f3729f9a01cf904 170 PIRSF PIRSF004749 1 170 2.6E-58 T 17-10-2018 IPR023635 Peptide deformylase BJD13_19925 4f65348ba09b40e41f3729f9a01cf904 170 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 6 162 8.0E-54 T 17-10-2018 IPR023635 Peptide deformylase BJD13_19925 4f65348ba09b40e41f3729f9a01cf904 170 Pfam PF01327 Polypeptide deformylase 5 155 8.0E-53 T 17-10-2018 IPR023635 Peptide deformylase BJD13_19925 4f65348ba09b40e41f3729f9a01cf904 170 Gene3D G3DSA:3.90.45.10 1 170 2.5E-63 T 17-10-2018 IPR036821 Peptide deformylase superfamily BJD13_19925 4f65348ba09b40e41f3729f9a01cf904 170 PRINTS PR01576 Peptide deformylase signature 123 152 1.1E-38 T 17-10-2018 IPR023635 Peptide deformylase BJD13_19925 4f65348ba09b40e41f3729f9a01cf904 170 PRINTS PR01576 Peptide deformylase signature 104 122 1.1E-38 T 17-10-2018 IPR023635 Peptide deformylase BJD13_19925 4f65348ba09b40e41f3729f9a01cf904 170 PRINTS PR01576 Peptide deformylase signature 36 65 1.1E-38 T 17-10-2018 IPR023635 Peptide deformylase BJD13_19925 4f65348ba09b40e41f3729f9a01cf904 170 PRINTS PR01576 Peptide deformylase signature 92 103 1.1E-38 T 17-10-2018 IPR023635 Peptide deformylase BJD13_19925 4f65348ba09b40e41f3729f9a01cf904 170 SUPERFAMILY SSF56420 2 167 4.97E-63 T 17-10-2018 IPR036821 Peptide deformylase superfamily BJD13_19925 4f65348ba09b40e41f3729f9a01cf904 170 Hamap MF_00163 Peptide deformylase [def]. 2 165 31.427 T 17-10-2018 IPR023635 Peptide deformylase BJD13_10565 0d3a3d1c4d0f61e7cd222992a6fc34ee 254 SUPERFAMILY SSF48317 30 242 1.18E-11 T 17-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily BJD13_10565 0d3a3d1c4d0f61e7cd222992a6fc34ee 254 Pfam PF01569 PAP2 superfamily 109 238 7.1E-9 T 17-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BJD13_09810 34e484d0abe56b968ddfb603bb2c1581 197 Pfam PF00924 Mechanosensitive ion channel 72 186 1.4E-14 T 17-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 BJD13_09810 34e484d0abe56b968ddfb603bb2c1581 197 SUPERFAMILY SSF50182 115 188 5.23E-9 T 17-10-2018 IPR010920 LSM domain superfamily BJD13_13075 8a8f5eec825c14e7e4d1d91dd985072d 500 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 388 494 3.2E-19 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_13075 8a8f5eec825c14e7e4d1d91dd985072d 500 SMART SM00387 388 497 1.5E-28 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_13075 8a8f5eec825c14e7e4d1d91dd985072d 500 SMART SM00388 292 349 1.1E-5 T 17-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BJD13_13075 8a8f5eec825c14e7e4d1d91dd985072d 500 SUPERFAMILY SSF55874 345 495 8.26E-33 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_13075 8a8f5eec825c14e7e4d1d91dd985072d 500 SMART SM00304 239 291 5.5E-5 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_13075 8a8f5eec825c14e7e4d1d91dd985072d 500 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 436 6.2E-9 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_13075 8a8f5eec825c14e7e4d1d91dd985072d 500 PRINTS PR00344 Bacterial sensor protein C-terminal signature 457 475 6.2E-9 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_13075 8a8f5eec825c14e7e4d1d91dd985072d 500 PRINTS PR00344 Bacterial sensor protein C-terminal signature 481 494 6.2E-9 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_13075 8a8f5eec825c14e7e4d1d91dd985072d 500 Gene3D G3DSA:1.10.287.130 237 344 8.5E-16 T 17-10-2018 BJD13_13075 8a8f5eec825c14e7e4d1d91dd985072d 500 Gene3D G3DSA:3.30.565.10 350 495 1.4E-30 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_13075 8a8f5eec825c14e7e4d1d91dd985072d 500 SUPERFAMILY SSF47384 276 347 8.24E-10 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD13_18870 e407c7f6c41ef18e6e36c4de0cfe2b6f 293 SUPERFAMILY SSF82171 36 222 1.83E-19 T 17-10-2018 BJD13_18870 e407c7f6c41ef18e6e36c4de0cfe2b6f 293 Pfam PF07676 WD40-like Beta Propeller Repeat 84 120 1.1E-9 T 17-10-2018 IPR011659 WD40-like Beta Propeller BJD13_18870 e407c7f6c41ef18e6e36c4de0cfe2b6f 293 Pfam PF07676 WD40-like Beta Propeller Repeat 136 174 1.0E-7 T 17-10-2018 IPR011659 WD40-like Beta Propeller BJD13_18870 e407c7f6c41ef18e6e36c4de0cfe2b6f 293 Pfam PF07676 WD40-like Beta Propeller Repeat 33 68 9.0E-9 T 17-10-2018 IPR011659 WD40-like Beta Propeller BJD13_18870 e407c7f6c41ef18e6e36c4de0cfe2b6f 293 Gene3D G3DSA:2.120.10.30 26 134 4.6E-14 T 17-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like BJD13_18870 e407c7f6c41ef18e6e36c4de0cfe2b6f 293 Gene3D G3DSA:2.120.10.30 135 290 9.0E-7 T 17-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like BJD13_20425 d99f5f9fbb3fefe9b11c69c8f1eb7622 387 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 17-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 BJD13_20425 d99f5f9fbb3fefe9b11c69c8f1eb7622 387 SUPERFAMILY SSF51735 164 349 1.05E-60 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_20425 d99f5f9fbb3fefe9b11c69c8f1eb7622 387 Pfam PF13823 Alcohol dehydrogenase GroES-associated 1 20 1.2E-8 T 17-10-2018 IPR027399 Alcohol dehydrogenase GroES-associated BJD13_20425 d99f5f9fbb3fefe9b11c69c8f1eb7622 387 Gene3D G3DSA:3.40.50.720 178 338 2.8E-129 T 17-10-2018 BJD13_20425 d99f5f9fbb3fefe9b11c69c8f1eb7622 387 Pfam PF00107 Zinc-binding dehydrogenase 197 283 6.0E-9 T 17-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 BJD13_20425 d99f5f9fbb3fefe9b11c69c8f1eb7622 387 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 152 8.8E-29 T 17-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 BJD13_20425 d99f5f9fbb3fefe9b11c69c8f1eb7622 387 Gene3D G3DSA:3.90.180.10 8 374 2.8E-129 T 17-10-2018 BJD13_20425 d99f5f9fbb3fefe9b11c69c8f1eb7622 387 SUPERFAMILY SSF50129 1 195 3.96E-57 T 17-10-2018 IPR011032 GroES-like superfamily BJD13_13590 1a4f3e77e9c234d0c9ddcd2f6a982f18 321 Pfam PF13280 WYL domain 144 313 1.4E-38 T 17-10-2018 IPR026881 WYL domain BJD13_13590 1a4f3e77e9c234d0c9ddcd2f6a982f18 321 Pfam PF08279 HTH domain 6 61 3.4E-12 T 17-10-2018 IPR013196 Helix-turn-helix, type 11 BJD13_13590 1a4f3e77e9c234d0c9ddcd2f6a982f18 321 SUPERFAMILY SSF46785 2 47 2.18E-6 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_13590 1a4f3e77e9c234d0c9ddcd2f6a982f18 321 Gene3D G3DSA:1.10.10.10 1 63 6.6E-8 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_20780 4a035b4b58386944b6d1f771690cab3e 186 Pfam PF07209 Protein of unknown function (DUF1415) 11 178 4.9E-71 T 17-10-2018 IPR009858 Protein of unknown function DUF1415 BJD13_10785 36e51b7fb387079cc0dce14f8eade6e8 212 SMART SM00471 27 148 0.0011 T 17-10-2018 IPR003607 HD/PDEase domain BJD13_10785 36e51b7fb387079cc0dce14f8eade6e8 212 Gene3D G3DSA:1.10.3210.10 2 161 7.7E-37 T 17-10-2018 BJD13_10785 36e51b7fb387079cc0dce14f8eade6e8 212 Pfam PF13328 HD domain 11 166 3.4E-29 T 17-10-2018 IPR003607 HD/PDEase domain BJD13_10785 36e51b7fb387079cc0dce14f8eade6e8 212 SUPERFAMILY SSF109604 5 175 8.16E-33 T 17-10-2018 BJD13_12320 1a51646937ae30f8e508cd48bb61b394 309 SUPERFAMILY SSF103481 208 301 1.57E-6 T 17-10-2018 BJD13_12320 1a51646937ae30f8e508cd48bb61b394 309 SUPERFAMILY SSF103481 47 142 7.06E-5 T 17-10-2018 BJD13_08580 595ad9ead91f459cb6d9cc2d19e66af1 176 TIGRFAM TIGR03037 anthran_nbaC: 3-hydroxyanthranilate 3,4-dioxygenase 6 163 1.1E-79 T 17-10-2018 IPR010329 3-hydroxyanthranilic acid dioxygenase GO:0000334|GO:0005506|GO:0055114 KEGG: 00380+1.13.11.6|MetaCyc: PWY-5647|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-6505|Reactome: R-HSA-71240 BJD13_08580 595ad9ead91f459cb6d9cc2d19e66af1 176 Pfam PF06052 3-hydroxyanthranilic acid dioxygenase 3 150 4.3E-76 T 17-10-2018 IPR010329 3-hydroxyanthranilic acid dioxygenase GO:0000334|GO:0005506|GO:0055114 KEGG: 00380+1.13.11.6|MetaCyc: PWY-5647|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-6505|Reactome: R-HSA-71240 BJD13_08580 595ad9ead91f459cb6d9cc2d19e66af1 176 SUPERFAMILY SSF51182 1 168 1.41E-58 T 17-10-2018 IPR011051 RmlC-like cupin domain superfamily BJD13_08580 595ad9ead91f459cb6d9cc2d19e66af1 176 Gene3D G3DSA:2.60.120.10 4 175 1.5E-74 T 17-10-2018 IPR014710 RmlC-like jelly roll fold BJD13_08580 595ad9ead91f459cb6d9cc2d19e66af1 176 Hamap MF_00825 3-hydroxyanthranilate 3,4-dioxygenase [nbaC]. 2 168 37.648 T 17-10-2018 IPR010329 3-hydroxyanthranilic acid dioxygenase GO:0000334|GO:0005506|GO:0055114 KEGG: 00380+1.13.11.6|MetaCyc: PWY-5647|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-6505|Reactome: R-HSA-71240 BJD13_04320 9a459d90c5ac266a4c5698c1bf4698e0 133 SUPERFAMILY SSF81273 81 111 3.84E-6 T 17-10-2018 BJD13_04320 9a459d90c5ac266a4c5698c1bf4698e0 133 SMART SM00528 78 121 8.2E-18 T 17-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 BJD13_04320 9a459d90c5ac266a4c5698c1bf4698e0 133 Gene3D G3DSA:3.30.160.510 61 124 4.3E-27 T 17-10-2018 BJD13_04320 9a459d90c5ac266a4c5698c1bf4698e0 133 Pfam PF00816 H-NS histone family 17 111 1.8E-17 T 17-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 BJD13_18325 cf983396190237e64af1e3521918c686 167 SUPERFAMILY SSF160719 66 153 4.32E-11 T 17-10-2018 BJD13_18325 cf983396190237e64af1e3521918c686 167 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 11 162 7.0E-25 T 17-10-2018 IPR017737 Type VI secretion system, lysozyme-related protein BJD13_18325 cf983396190237e64af1e3521918c686 167 Pfam PF04965 Gene 25-like lysozyme 39 142 1.6E-21 T 17-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD BJD13_16155 0b35c8344f4b8c42c72568a3a5fa9eaf 490 Gene3D G3DSA:3.40.190.10 24 274 4.3E-76 T 17-10-2018 BJD13_16155 0b35c8344f4b8c42c72568a3a5fa9eaf 490 Gene3D G3DSA:3.40.190.120 118 219 4.3E-76 T 17-10-2018 BJD13_16155 0b35c8344f4b8c42c72568a3a5fa9eaf 490 SUPERFAMILY SSF53850 22 274 6.02E-56 T 17-10-2018 BJD13_16155 0b35c8344f4b8c42c72568a3a5fa9eaf 490 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 22 274 8.5E-59 T 17-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 BJD13_16155 0b35c8344f4b8c42c72568a3a5fa9eaf 490 SUPERFAMILY SSF161098 288 469 3.53E-34 T 17-10-2018 IPR035906 MetI-like superfamily BJD13_16155 0b35c8344f4b8c42c72568a3a5fa9eaf 490 Gene3D G3DSA:1.10.3720.10 283 479 5.8E-31 T 17-10-2018 IPR035906 MetI-like superfamily BJD13_16155 0b35c8344f4b8c42c72568a3a5fa9eaf 490 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 312 482 1.9E-23 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD13_04860 d1961ae7adea4f70df1d255922733431 293 SUPERFAMILY SSF161098 54 280 1.24E-62 T 17-10-2018 IPR035906 MetI-like superfamily BJD13_04860 d1961ae7adea4f70df1d255922733431 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 286 1.2E-18 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD13_04860 d1961ae7adea4f70df1d255922733431 293 Gene3D G3DSA:1.10.3720.10 50 291 2.5E-77 T 17-10-2018 IPR035906 MetI-like superfamily BJD13_00760 ed2b69edcce6484b83bbfba2c76008ff 354 SUPERFAMILY SSF53067 9 170 4.27E-19 T 17-10-2018 BJD13_00760 ed2b69edcce6484b83bbfba2c76008ff 354 Gene3D G3DSA:3.30.420.40 9 180 4.1E-19 T 17-10-2018 BJD13_00760 ed2b69edcce6484b83bbfba2c76008ff 354 Gene3D G3DSA:3.30.420.40 181 315 1.5E-14 T 17-10-2018 BJD13_00760 ed2b69edcce6484b83bbfba2c76008ff 354 SUPERFAMILY SSF53067 179 333 3.08E-16 T 17-10-2018 BJD13_08100 de304c3298041c4e36c17b2b6f373711 404 Pfam PF14907 Uncharacterised nucleotidyltransferase 36 261 1.0E-28 T 17-10-2018 IPR039498 Uncharacterised nucleotidyltransferase BJD13_16900 d8cde18c7f92888ee5ce4d9eb451a1d1 375 SMART SM00729 85 310 4.8E-4 T 17-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 BJD13_16900 d8cde18c7f92888ee5ce4d9eb451a1d1 375 Gene3D G3DSA:3.80.30.30 132 312 5.9E-9 T 17-10-2018 BJD13_16900 d8cde18c7f92888ee5ce4d9eb451a1d1 375 Pfam PF04055 Radical SAM superfamily 89 267 1.4E-13 T 17-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BJD13_16900 d8cde18c7f92888ee5ce4d9eb451a1d1 375 SUPERFAMILY SSF102114 71 297 2.94E-10 T 17-10-2018 BJD13_08595 544a1f9f5bb9e5dd277b202b94808b99 455 Hamap MF_01971 Kynurenine 3-monooxygenase [kmo]. 6 445 27.302 T 17-10-2018 IPR027545 Kynurenine 3-monooxygenase GO:0004502|GO:0006569|GO:0019805 KEGG: 00380+1.14.13.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7765|Reactome: R-HSA-71240 BJD13_08595 544a1f9f5bb9e5dd277b202b94808b99 455 SUPERFAMILY SSF51905 12 388 5.18E-52 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_08595 544a1f9f5bb9e5dd277b202b94808b99 455 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 312 328 1.0E-17 T 17-10-2018 BJD13_08595 544a1f9f5bb9e5dd277b202b94808b99 455 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 158 173 1.0E-17 T 17-10-2018 BJD13_08595 544a1f9f5bb9e5dd277b202b94808b99 455 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 312 1.0E-17 T 17-10-2018 BJD13_08595 544a1f9f5bb9e5dd277b202b94808b99 455 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 1.0E-17 T 17-10-2018 BJD13_08595 544a1f9f5bb9e5dd277b202b94808b99 455 Gene3D G3DSA:3.50.50.60 8 384 1.1E-117 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_08595 544a1f9f5bb9e5dd277b202b94808b99 455 Pfam PF01494 FAD binding domain 11 334 4.8E-23 T 17-10-2018 IPR002938 FAD-binding domain GO:0071949 BJD13_00430 51052807771bfdd02d63cfe8be6f3fd9 618 Pfam PF00092 von Willebrand factor type A domain 453 589 6.8E-5 T 17-10-2018 IPR002035 von Willebrand factor, type A BJD13_00430 51052807771bfdd02d63cfe8be6f3fd9 618 Gene3D G3DSA:3.40.50.410 449 609 6.0E-13 T 17-10-2018 IPR036465 von Willebrand factor A-like domain superfamily BJD13_00430 51052807771bfdd02d63cfe8be6f3fd9 618 SUPERFAMILY SSF53300 451 611 1.0E-15 T 17-10-2018 IPR036465 von Willebrand factor A-like domain superfamily BJD13_10525 2080c9fb01339c9763e2b78ed4f91191 199 PIRSF PIRSF028520 1 164 2.1E-83 T 17-10-2018 IPR016890 Uncharacterised conserved protein UCP028520 BJD13_10525 2080c9fb01339c9763e2b78ed4f91191 199 Pfam PF00583 Acetyltransferase (GNAT) family 24 125 1.7E-5 T 17-10-2018 IPR000182 GNAT domain BJD13_10525 2080c9fb01339c9763e2b78ed4f91191 199 Gene3D G3DSA:3.40.630.30 1 162 4.1E-14 T 17-10-2018 BJD13_10525 2080c9fb01339c9763e2b78ed4f91191 199 SUPERFAMILY SSF55729 2 154 1.54E-15 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD13_21520 5535e8d170a74fe52a7c3b5acfc65754 635 Gene3D G3DSA:3.90.550.10 247 464 9.1E-39 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD13_21520 5535e8d170a74fe52a7c3b5acfc65754 635 SUPERFAMILY SSF53448 259 503 4.13E-41 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD13_21520 5535e8d170a74fe52a7c3b5acfc65754 635 Pfam PF13641 Glycosyltransferase like family 2 258 482 1.3E-23 T 17-10-2018 BJD13_21520 5535e8d170a74fe52a7c3b5acfc65754 635 SUPERFAMILY SSF160246 23 155 8.37E-24 T 17-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily BJD13_21520 5535e8d170a74fe52a7c3b5acfc65754 635 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 27 160 5.2E-16 T 17-10-2018 IPR007831 General secretory system II, protein E, N-terminal BJD13_19660 b28265fcb80f763185feeccf3ac807ae 65 PIRSF PIRSF037225 2 65 2.2E-29 T 17-10-2018 IPR017143 Uncharacterised conserved protein UCP037225 BJD13_19660 b28265fcb80f763185feeccf3ac807ae 65 Pfam PF14255 Cysteine-rich CPXCG 10 59 2.9E-22 T 17-10-2018 IPR025990 Cysteine-rich CPXCG protein BJD13_10755 4cc7332a044501d8251c48394da64434 197 SMART SM00974 24 117 3.2E-8 T 17-10-2018 IPR018306 Bacteriophage T5, Orf172 DNA-binding BJD13_02480 adbe2704d6c16676b34ab006af76ef4b 60 TIGRFAM TIGR04560 ribo_THX: ribosomal small subunit protein bTHX 1 24 9.3E-13 T 17-10-2018 IPR030826 30S ribosomal protein GO:0005840 BJD13_02480 adbe2704d6c16676b34ab006af76ef4b 60 Pfam PF17067 Ribosomal protein S31e 2 38 7.6E-8 T 17-10-2018 IPR030826 30S ribosomal protein GO:0005840 BJD13_10100 9834e2eb68225318053ce494300d5e56 411 Gene3D G3DSA:3.90.1150.10 28 388 1.0E-56 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD13_10100 9834e2eb68225318053ce494300d5e56 411 Pfam PF00266 Aminotransferase class-V 66 334 1.2E-20 T 17-10-2018 IPR000192 Aminotransferase class V domain BJD13_10100 9834e2eb68225318053ce494300d5e56 411 Gene3D G3DSA:3.40.640.10 37 296 1.0E-56 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD13_10100 9834e2eb68225318053ce494300d5e56 411 SUPERFAMILY SSF53383 14 398 5.33E-61 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD13_13405 f6b63a7e691ae55e6a2ba20d266b2b13 372 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 325 349 - T 17-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BJD13_13405 f6b63a7e691ae55e6a2ba20d266b2b13 372 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 14 370 27.68 T 17-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BJD13_13405 f6b63a7e691ae55e6a2ba20d266b2b13 372 Pfam PF01098 Cell cycle protein 21 367 5.5E-96 T 17-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BJD13_13405 f6b63a7e691ae55e6a2ba20d266b2b13 372 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 20 367 5.6E-117 T 17-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BJD13_20925 b1bfb5121de91cf660f5b3ea17ce1ffe 189 SUPERFAMILY SSF48600 37 188 2.33E-39 T 17-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BJD13_20925 b1bfb5121de91cf660f5b3ea17ce1ffe 189 Gene3D G3DSA:1.20.1250.110 26 189 2.2E-56 T 17-10-2018 BJD13_20925 b1bfb5121de91cf660f5b3ea17ce1ffe 189 SMART SM00830 29 107 1.1E-14 T 17-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BJD13_20925 b1bfb5121de91cf660f5b3ea17ce1ffe 189 Pfam PF01817 Chorismate mutase type II 37 105 2.1E-7 T 17-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BJD13_20925 b1bfb5121de91cf660f5b3ea17ce1ffe 189 PIRSF PIRSF026640 4 189 2.3E-65 T 17-10-2018 IPR008240 Chorismate mutase, periplasmic KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BJD13_20925 b1bfb5121de91cf660f5b3ea17ce1ffe 189 TIGRFAM TIGR01806 CM_mono2: putative chorismate mutase 31 143 1.3E-40 T 17-10-2018 IPR008240 Chorismate mutase, periplasmic KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BJD13_19680 5e0f3f4092e7404fa318916c42d430a9 133 ProSitePatterns PS00018 EF-hand calcium-binding domain. 108 120 - T 17-10-2018 IPR018247 EF-Hand 1, calcium-binding site BJD13_19680 5e0f3f4092e7404fa318916c42d430a9 133 Pfam PF13202 EF hand 104 121 2.7E-5 T 17-10-2018 IPR002048 EF-hand domain GO:0005509 BJD13_19680 5e0f3f4092e7404fa318916c42d430a9 133 SUPERFAMILY SSF47473 76 123 7.96E-9 T 17-10-2018 IPR011992 EF-hand domain pair BJD13_19680 5e0f3f4092e7404fa318916c42d430a9 133 Gene3D G3DSA:1.10.238.10 65 125 9.1E-11 T 17-10-2018 BJD13_18635 417645e3f9065b590a2853bd55ada4d7 399 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 73 239 9.9E-20 T 17-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal BJD13_18635 417645e3f9065b590a2853bd55ada4d7 399 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 250 356 1.3E-28 T 17-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal BJD13_18635 417645e3f9065b590a2853bd55ada4d7 399 SUPERFAMILY SSF53901 212 398 4.32E-48 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 BJD13_18635 417645e3f9065b590a2853bd55ada4d7 399 Gene3D G3DSA:3.40.47.10 1 250 1.4E-29 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 BJD13_18635 417645e3f9065b590a2853bd55ada4d7 399 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 156 172 - T 17-10-2018 IPR018201 Beta-ketoacyl synthase, active site BJD13_18635 417645e3f9065b590a2853bd55ada4d7 399 SMART SM00825 Beta-ketoacyl synthase 4 399 5.4E-8 T 17-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BJD13_18635 417645e3f9065b590a2853bd55ada4d7 399 Gene3D G3DSA:3.40.47.10 251 394 3.1E-44 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 BJD13_18635 417645e3f9065b590a2853bd55ada4d7 399 SUPERFAMILY SSF53901 1 241 9.6E-32 T 17-10-2018 IPR016039 Thiolase-like GO:0003824 BJD13_09625 2710d84abf52216468ab38ecd94fe081 129 Gene3D G3DSA:3.10.180.10 8 127 1.6E-31 T 17-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD13_09625 2710d84abf52216468ab38ecd94fe081 129 SUPERFAMILY SSF54593 1 127 3.62E-32 T 17-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD13_09625 2710d84abf52216468ab38ecd94fe081 129 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 125 9.5E-21 T 17-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BJD13_12230 862c0d4e394bd445fae13e880a8252f3 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 63 74 1.2E-13 T 17-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 BJD13_12230 862c0d4e394bd445fae13e880a8252f3 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 37 45 1.2E-13 T 17-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 BJD13_12230 862c0d4e394bd445fae13e880a8252f3 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 106 120 1.2E-13 T 17-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 BJD13_12230 862c0d4e394bd445fae13e880a8252f3 313 PRINTS PR00111 Alpha/beta hydrolase fold signature 60 75 7.8E-6 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD13_12230 862c0d4e394bd445fae13e880a8252f3 313 PRINTS PR00111 Alpha/beta hydrolase fold signature 106 119 7.8E-6 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD13_12230 862c0d4e394bd445fae13e880a8252f3 313 PRINTS PR00111 Alpha/beta hydrolase fold signature 120 133 7.8E-6 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD13_12230 862c0d4e394bd445fae13e880a8252f3 313 PIRSF PIRSF006431 1 313 9.8E-139 T 17-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 BJD13_12230 862c0d4e394bd445fae13e880a8252f3 313 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 9 311 1.3E-152 T 17-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 BJD13_12230 862c0d4e394bd445fae13e880a8252f3 313 Gene3D G3DSA:3.40.50.1820 1 313 1.6E-115 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_12230 862c0d4e394bd445fae13e880a8252f3 313 SUPERFAMILY SSF53474 2 310 1.03E-65 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_12230 862c0d4e394bd445fae13e880a8252f3 313 Pfam PF00561 alpha/beta hydrolase fold 35 298 1.8E-32 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD13_06650 63a8c99996e45c48e3d52927c03d25be 954 Pfam PF07495 Y_Y_Y domain 656 718 2.0E-10 T 17-10-2018 IPR011123 Two component regulator three Y BJD13_06650 63a8c99996e45c48e3d52927c03d25be 954 Gene3D G3DSA:2.130.10.10 7 111 3.9E-7 T 17-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BJD13_06650 63a8c99996e45c48e3d52927c03d25be 954 Gene3D G3DSA:2.60.40.10 627 727 2.0E-7 T 17-10-2018 IPR013783 Immunoglobulin-like fold BJD13_06650 63a8c99996e45c48e3d52927c03d25be 954 Pfam PF00990 Diguanylate cyclase, GGDEF domain 787 943 1.5E-43 T 17-10-2018 IPR000160 GGDEF domain BJD13_06650 63a8c99996e45c48e3d52927c03d25be 954 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 785 945 3.6E-44 T 17-10-2018 IPR000160 GGDEF domain BJD13_06650 63a8c99996e45c48e3d52927c03d25be 954 SUPERFAMILY SSF63829 41 475 2.18E-10 T 17-10-2018 BJD13_06650 63a8c99996e45c48e3d52927c03d25be 954 SMART SM00267 776 947 1.3E-54 T 17-10-2018 IPR000160 GGDEF domain BJD13_06650 63a8c99996e45c48e3d52927c03d25be 954 SUPERFAMILY SSF55073 792 945 5.26E-41 T 17-10-2018 IPR029787 Nucleotide cyclase BJD13_06650 63a8c99996e45c48e3d52927c03d25be 954 Gene3D G3DSA:3.30.70.270 772 946 1.9E-51 T 17-10-2018 BJD13_06650 63a8c99996e45c48e3d52927c03d25be 954 Gene3D G3DSA:2.130.10.10 412 612 4.7E-18 T 17-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BJD13_06650 63a8c99996e45c48e3d52927c03d25be 954 Gene3D G3DSA:2.130.10.10 159 355 1.0E-16 T 17-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BJD13_11925 791d84746b0f871bd24cfd1494e0f03b 111 Gene3D G3DSA:3.30.70.600 10 111 3.2E-36 T 17-10-2018 IPR036838 Ribosomal protein S10 domain superfamily BJD13_11925 791d84746b0f871bd24cfd1494e0f03b 111 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 11 110 26.858 T 17-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_11925 791d84746b0f871bd24cfd1494e0f03b 111 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 12 109 5.8E-45 T 17-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_11925 791d84746b0f871bd24cfd1494e0f03b 111 Pfam PF00338 Ribosomal protein S10p/S20e 15 109 2.9E-34 T 17-10-2018 IPR027486 Ribosomal protein S10 domain BJD13_11925 791d84746b0f871bd24cfd1494e0f03b 111 ProSitePatterns PS00361 Ribosomal protein S10 signature. 37 52 - T 17-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_11925 791d84746b0f871bd24cfd1494e0f03b 111 PRINTS PR00971 Ribosomal protein S10 family signature 13 26 4.3E-18 T 17-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_11925 791d84746b0f871bd24cfd1494e0f03b 111 PRINTS PR00971 Ribosomal protein S10 family signature 48 63 4.3E-18 T 17-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_11925 791d84746b0f871bd24cfd1494e0f03b 111 PRINTS PR00971 Ribosomal protein S10 family signature 69 83 4.3E-18 T 17-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BJD13_11925 791d84746b0f871bd24cfd1494e0f03b 111 SUPERFAMILY SSF54999 13 110 2.35E-36 T 17-10-2018 IPR036838 Ribosomal protein S10 domain superfamily BJD13_11925 791d84746b0f871bd24cfd1494e0f03b 111 SMART SM01403 15 109 6.4E-55 T 17-10-2018 IPR027486 Ribosomal protein S10 domain BJD13_13810 ec9d40e285d083b68a2ae9dcc2577f3b 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 124 4.2E-8 T 17-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BJD13_13810 ec9d40e285d083b68a2ae9dcc2577f3b 131 SUPERFAMILY SSF54593 2 130 1.51E-22 T 17-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD13_13810 ec9d40e285d083b68a2ae9dcc2577f3b 131 Gene3D G3DSA:3.10.180.10 1 131 9.6E-32 T 17-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD13_11075 f1d0913d5e2d70e6a85e6365e7ec725a 451 SUPERFAMILY SSF56322 7 449 5.76E-123 T 17-10-2018 IPR005801 ADC synthase GO:0009058 BJD13_11075 f1d0913d5e2d70e6a85e6365e7ec725a 451 TIGRFAM TIGR01824 PabB-clade2: aminodeoxychorismate synthase, component I 96 443 3.9E-145 T 17-10-2018 IPR010118 Para-aminobenzoate synthase/anthranilate synthase, component I BJD13_11075 f1d0913d5e2d70e6a85e6365e7ec725a 451 Pfam PF00425 chorismate binding enzyme 187 440 1.3E-91 T 17-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal BJD13_11075 f1d0913d5e2d70e6a85e6365e7ec725a 451 PRINTS PR00095 Anthranilate synthase component I signature 382 396 7.0E-18 T 17-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BJD13_11075 f1d0913d5e2d70e6a85e6365e7ec725a 451 PRINTS PR00095 Anthranilate synthase component I signature 288 301 7.0E-18 T 17-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BJD13_11075 f1d0913d5e2d70e6a85e6365e7ec725a 451 PRINTS PR00095 Anthranilate synthase component I signature 397 411 7.0E-18 T 17-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BJD13_11075 f1d0913d5e2d70e6a85e6365e7ec725a 451 PRINTS PR00095 Anthranilate synthase component I signature 302 315 7.0E-18 T 17-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BJD13_11075 f1d0913d5e2d70e6a85e6365e7ec725a 451 Gene3D G3DSA:3.60.120.10 1 451 2.3E-160 T 17-10-2018 IPR005801 ADC synthase GO:0009058 BJD13_19375 5ac067380f760993d8588b8d6f49ce4e 294 Gene3D G3DSA:3.30.70.1070 213 294 8.0E-17 T 17-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 BJD13_19375 5ac067380f760993d8588b8d6f49ce4e 294 Pfam PF05036 Sporulation related domain 218 292 1.3E-14 T 17-10-2018 IPR007730 Sporulation-like domain GO:0042834 BJD13_19375 5ac067380f760993d8588b8d6f49ce4e 294 SUPERFAMILY SSF110997 217 292 2.09E-15 T 17-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 BJD13_12735 2a8634b214bd090e0841650a6cecbe9c 311 Gene3D G3DSA:3.40.50.720 2 119 1.0E-35 T 17-10-2018 BJD13_12735 2a8634b214bd090e0841650a6cecbe9c 311 Gene3D G3DSA:3.30.360.10 120 310 8.6E-77 T 17-10-2018 BJD13_12735 2a8634b214bd090e0841650a6cecbe9c 311 SUPERFAMILY SSF51735 7 173 5.11E-34 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_12735 2a8634b214bd090e0841650a6cecbe9c 311 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 7 116 7.6E-17 T 17-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 BJD13_04125 ba464c3b795be45a05eabb0c3d56afad 461 Gene3D G3DSA:3.10.20.70 13 124 1.9E-9 T 17-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BJD13_04125 ba464c3b795be45a05eabb0c3d56afad 461 SUPERFAMILY SSF55931 123 458 1.18E-106 T 17-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 BJD13_04125 ba464c3b795be45a05eabb0c3d56afad 461 Pfam PF00120 Glutamine synthetase, catalytic domain 124 455 3.6E-105 T 17-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BJD13_04125 ba464c3b795be45a05eabb0c3d56afad 461 Gene3D G3DSA:3.30.590.10 126 459 5.0E-101 T 17-10-2018 BJD13_04125 ba464c3b795be45a05eabb0c3d56afad 461 SUPERFAMILY SSF54368 19 122 5.49E-24 T 17-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BJD13_04125 ba464c3b795be45a05eabb0c3d56afad 461 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 17-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 BJD13_04125 ba464c3b795be45a05eabb0c3d56afad 461 SMART SM01230 123 380 1.0E-103 T 17-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BJD13_19385 dfbbbc8ad1e1800a98087eee41330cbd 225 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 17-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site BJD13_19385 dfbbbc8ad1e1800a98087eee41330cbd 225 SUPERFAMILY SSF47781 16 88 1.96E-5 T 17-10-2018 IPR010994 RuvA domain 2-like BJD13_19385 dfbbbc8ad1e1800a98087eee41330cbd 225 Gene3D G3DSA:3.40.140.10 101 224 1.9E-40 T 17-10-2018 BJD13_19385 dfbbbc8ad1e1800a98087eee41330cbd 225 Pfam PF04002 RadC-like JAB domain 104 222 8.3E-42 T 17-10-2018 IPR025657 RadC-like JAB domain BJD13_19385 dfbbbc8ad1e1800a98087eee41330cbd 225 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 1.1E-66 T 17-10-2018 IPR001405 Uncharacterised protein family UPF0758 BJD13_02280 871f742e268908603f10456c39960791 427 SUPERFAMILY SSF141868 162 408 3.4E-79 T 17-10-2018 IPR035919 EAL domain superfamily BJD13_02280 871f742e268908603f10456c39960791 427 SMART SM00052 160 400 2.4E-86 T 17-10-2018 IPR001633 EAL domain BJD13_02280 871f742e268908603f10456c39960791 427 SUPERFAMILY SSF52172 16 133 1.01E-20 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_02280 871f742e268908603f10456c39960791 427 SMART SM00448 14 132 2.9E-13 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_02280 871f742e268908603f10456c39960791 427 Pfam PF00072 Response regulator receiver domain 16 131 6.1E-17 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_02280 871f742e268908603f10456c39960791 427 Gene3D G3DSA:3.40.50.2300 15 136 2.1E-19 T 17-10-2018 BJD13_02280 871f742e268908603f10456c39960791 427 Pfam PF00563 EAL domain 162 395 8.6E-73 T 17-10-2018 IPR001633 EAL domain BJD13_02280 871f742e268908603f10456c39960791 427 Gene3D G3DSA:3.20.20.450 159 419 2.1E-87 T 17-10-2018 IPR035919 EAL domain superfamily BJD13_03655 a0f70cc1ec92f242119e577938194aa1 218 SMART SM00507 111 164 1.2E-9 T 17-10-2018 IPR003615 HNH nuclease BJD13_03655 a0f70cc1ec92f242119e577938194aa1 218 Pfam PF14279 HNH endonuclease 124 178 1.7E-16 T 17-10-2018 IPR029471 HNH endonuclease 5 BJD13_03655 a0f70cc1ec92f242119e577938194aa1 218 Gene3D G3DSA:3.30.40.60 93 196 1.5E-23 T 17-10-2018 BJD13_09405 74b911f0ddca74ff9055d007e789cd4a 118 Pfam PF03960 ArsC family 5 113 7.5E-14 T 17-10-2018 IPR006660 Arsenate reductase-like BJD13_09405 74b911f0ddca74ff9055d007e789cd4a 118 SUPERFAMILY SSF52833 1 115 2.0E-29 T 17-10-2018 IPR036249 Thioredoxin-like superfamily BJD13_09405 74b911f0ddca74ff9055d007e789cd4a 118 Gene3D G3DSA:3.40.30.10 1 115 4.0E-35 T 17-10-2018 BJD13_09405 74b911f0ddca74ff9055d007e789cd4a 118 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 113 1.1E-28 T 17-10-2018 IPR006504 Transcriptional regulator Spx/MgsR BJD13_03290 96e6f8c536539c67abcdbccbdb81d31d 461 Gene3D G3DSA:3.30.1850.10 13 132 2.9E-41 T 17-10-2018 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 BJD13_03290 96e6f8c536539c67abcdbccbdb81d31d 461 SUPERFAMILY SSF102405 130 337 1.34E-39 T 17-10-2018 BJD13_03290 96e6f8c536539c67abcdbccbdb81d31d 461 Pfam PF11892 Domain of unknown function (DUF3412) 342 460 2.9E-52 T 17-10-2018 IPR021826 Domain of unknown function DUF3412 KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 BJD13_03290 96e6f8c536539c67abcdbccbdb81d31d 461 Pfam PF03641 Possible lysine decarboxylase 198 337 7.1E-28 T 17-10-2018 IPR031100 LOG family BJD13_03290 96e6f8c536539c67abcdbccbdb81d31d 461 Pfam PF14793 Domain of unknown function (DUF4478) 17 122 1.3E-39 T 17-10-2018 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 BJD13_03290 96e6f8c536539c67abcdbccbdb81d31d 461 Gene3D G3DSA:3.40.50.450 133 459 2.0E-107 T 17-10-2018 BJD13_23585 25d8ba7d7c1077895ca7b47b67d17749 334 TIGRFAM TIGR00444 mazG: MazG family protein 16 267 1.5E-90 T 17-10-2018 IPR011551 NTP pyrophosphohydrolase MazG BJD13_23585 25d8ba7d7c1077895ca7b47b67d17749 334 SUPERFAMILY SSF101386 145 246 5.23E-24 T 17-10-2018 BJD13_23585 25d8ba7d7c1077895ca7b47b67d17749 334 Gene3D G3DSA:1.10.287.1080 7 130 5.6E-46 T 17-10-2018 BJD13_23585 25d8ba7d7c1077895ca7b47b67d17749 334 SUPERFAMILY SSF101386 9 108 8.29E-23 T 17-10-2018 BJD13_23585 25d8ba7d7c1077895ca7b47b67d17749 334 Gene3D G3DSA:1.10.287.1080 137 272 1.1E-40 T 17-10-2018 BJD13_23585 25d8ba7d7c1077895ca7b47b67d17749 334 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 33 106 3.1E-27 T 17-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core BJD13_23585 25d8ba7d7c1077895ca7b47b67d17749 334 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 174 236 1.1E-6 T 17-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core BJD13_11010 7a10b966149b134436c80abbcc1f5c59 738 Pfam PF00593 TonB dependent receptor 265 735 1.2E-37 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_11010 7a10b966149b134436c80abbcc1f5c59 738 SUPERFAMILY SSF56935 32 738 1.51E-94 T 17-10-2018 BJD13_11010 7a10b966149b134436c80abbcc1f5c59 738 Gene3D G3DSA:2.40.170.20 44 738 3.8E-118 T 17-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BJD13_11010 7a10b966149b134436c80abbcc1f5c59 738 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 162 6.4E-10 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_14330 d4c601f1e9597d47833c7dc0929f2d95 737 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 12 716 4.2E-230 T 17-10-2018 IPR010020 Integral membrane protein, YccS/YhfK BJD13_14330 d4c601f1e9597d47833c7dc0929f2d95 737 Pfam PF13515 Fusaric acid resistance protein-like 414 534 4.4E-21 T 17-10-2018 BJD13_14330 d4c601f1e9597d47833c7dc0929f2d95 737 Pfam PF12805 FUSC-like inner membrane protein yccS 71 357 3.3E-102 T 17-10-2018 IPR032692 Integral membrane protein YccS, N-terminal BJD13_14330 d4c601f1e9597d47833c7dc0929f2d95 737 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 13 716 4.9E-209 T 17-10-2018 IPR010019 Integral membrane protein, YccS BJD13_02885 dcc4ede2f9315f7e6cfdd5ac0a795fbe 231 SUPERFAMILY SSF144091 3 206 2.88E-45 T 17-10-2018 BJD13_02885 dcc4ede2f9315f7e6cfdd5ac0a795fbe 231 Pfam PF01694 Rhomboid family 59 208 6.1E-40 T 17-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 BJD13_02885 dcc4ede2f9315f7e6cfdd5ac0a795fbe 231 Gene3D G3DSA:1.20.1540.10 1 208 3.2E-35 T 17-10-2018 IPR035952 Rhomboid-like superfamily BJD13_02885 dcc4ede2f9315f7e6cfdd5ac0a795fbe 231 SMART SM01160 56 145 7.8E-6 T 17-10-2018 BJD13_07200 7fed2bc87717c1551ca7375990a458d3 363 Gene3D G3DSA:3.40.640.10 53 262 1.1E-118 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD13_07200 7fed2bc87717c1551ca7375990a458d3 363 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 11 357 1.8E-108 T 17-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 BJD13_07200 7fed2bc87717c1551ca7375990a458d3 363 SUPERFAMILY SSF53383 27 357 1.71E-72 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD13_07200 7fed2bc87717c1551ca7375990a458d3 363 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 9 359 53.757 T 17-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 BJD13_07200 7fed2bc87717c1551ca7375990a458d3 363 Gene3D G3DSA:3.90.1150.10 9 351 1.1E-118 T 17-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BJD13_07200 7fed2bc87717c1551ca7375990a458d3 363 Pfam PF00155 Aminotransferase class I and II 50 355 7.9E-52 T 17-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BJD13_06425 431d299d49bc8d519f908310b090280f 251 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 5 227 1.1E-55 T 17-10-2018 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 BJD13_06425 431d299d49bc8d519f908310b090280f 251 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 172 246 4.2E-22 T 17-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BJD13_06425 431d299d49bc8d519f908310b090280f 251 SUPERFAMILY SSF117143 77 208 3.53E-14 T 17-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like BJD13_06425 431d299d49bc8d519f908310b090280f 251 Pfam PF00460 Flagella basal body rod protein 5 35 1.4E-8 T 17-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 BJD13_06425 431d299d49bc8d519f908310b090280f 251 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 121 1.1E-35 T 17-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G BJD13_09740 c9173896bff28a8f086683f280beefeb 64 Pfam PF09791 Oxidoreductase-like protein, N-terminal 14 52 1.6E-13 T 17-10-2018 IPR019180 Oxidoreductase-like, N-terminal BJD13_06450 5658799dcb1d07c7d4070e11dcb31a51 392 SMART SM00047 207 368 1.9E-39 T 17-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 BJD13_06450 5658799dcb1d07c7d4070e11dcb31a51 392 Pfam PF10135 Rod binding protein 38 84 3.3E-12 T 17-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal BJD13_06450 5658799dcb1d07c7d4070e11dcb31a51 392 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 225 356 3.6E-20 T 17-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 BJD13_06450 5658799dcb1d07c7d4070e11dcb31a51 392 PRINTS PR01002 Flagellar protein FlgJ signature 16 39 2.3E-11 T 17-10-2018 BJD13_06450 5658799dcb1d07c7d4070e11dcb31a51 392 PRINTS PR01002 Flagellar protein FlgJ signature 61 83 2.3E-11 T 17-10-2018 BJD13_06450 5658799dcb1d07c7d4070e11dcb31a51 392 Gene3D G3DSA:1.10.530.10 215 357 6.4E-47 T 17-10-2018 BJD13_16995 82ea4680bed88da1e5585414cf608c42 46 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 3 46 1.2E-25 T 17-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_16995 82ea4680bed88da1e5585414cf608c42 46 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 3 46 16.576 T 17-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_16995 82ea4680bed88da1e5585414cf608c42 46 Pfam PF00468 Ribosomal protein L34 3 46 5.2E-25 T 17-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_16995 82ea4680bed88da1e5585414cf608c42 46 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 4 28 1.0E-7 T 17-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_16995 82ea4680bed88da1e5585414cf608c42 46 ProSitePatterns PS00784 Ribosomal protein L34 signature. 4 23 - T 17-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_06885 c69ffa3dbc644d53204d1a906033b003 753 SUPERFAMILY SSF158472 214 265 1.96E-9 T 17-10-2018 BJD13_06885 c69ffa3dbc644d53204d1a906033b003 753 SMART SM00283 448 695 4.3E-93 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD13_06885 c69ffa3dbc644d53204d1a906033b003 753 Pfam PF00672 HAMP domain 214 262 1.6E-8 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_06885 c69ffa3dbc644d53204d1a906033b003 753 SMART SM00304 214 266 1.5E-8 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_06885 c69ffa3dbc644d53204d1a906033b003 753 SMART SM00304 349 402 21.0 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_06885 c69ffa3dbc644d53204d1a906033b003 753 SMART SM00304 447 500 56.0 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_06885 c69ffa3dbc644d53204d1a906033b003 753 SUPERFAMILY SSF58104 415 697 3.92E-72 T 17-10-2018 BJD13_06885 c69ffa3dbc644d53204d1a906033b003 753 Gene3D G3DSA:1.10.287.950 397 697 2.8E-86 T 17-10-2018 BJD13_06885 c69ffa3dbc644d53204d1a906033b003 753 Gene3D G3DSA:1.20.120.1530 205 352 1.5E-42 T 17-10-2018 BJD13_06885 c69ffa3dbc644d53204d1a906033b003 753 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 575 604 3.5E-58 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD13_06885 c69ffa3dbc644d53204d1a906033b003 753 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 469 498 3.5E-58 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD13_06885 c69ffa3dbc644d53204d1a906033b003 753 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 546 573 3.5E-58 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD13_06885 c69ffa3dbc644d53204d1a906033b003 753 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 623 652 3.5E-58 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD13_06885 c69ffa3dbc644d53204d1a906033b003 753 Pfam PF12729 Four helix bundle sensory module for signal transduction 8 181 1.7E-15 T 17-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain BJD13_06885 c69ffa3dbc644d53204d1a906033b003 753 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 508 662 5.3E-53 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD13_03485 e383720da51c872abb5cf3a72cc9646b 728 Pfam PF06202 Amylo-alpha-1,6-glucosidase 107 290 3.9E-5 T 17-10-2018 IPR032790 Glycogen debranching enzyme, C-terminal KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-6798695|Reactome: R-HSA-70221 BJD13_03485 e383720da51c872abb5cf3a72cc9646b 728 Gene3D G3DSA:1.50.10.10 90 414 5.2E-24 T 17-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 BJD13_03485 e383720da51c872abb5cf3a72cc9646b 728 SUPERFAMILY SSF48208 90 449 4.16E-34 T 17-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 BJD13_16370 0b0b26d6de67d4585895133d2c12367b 340 Gene3D G3DSA:3.40.1190.20 3 340 2.6E-112 T 17-10-2018 IPR029056 Ribokinase-like BJD13_16370 0b0b26d6de67d4585895133d2c12367b 340 SUPERFAMILY SSF53613 2 329 4.21E-72 T 17-10-2018 IPR029056 Ribokinase-like BJD13_16370 0b0b26d6de67d4585895133d2c12367b 340 Pfam PF00294 pfkB family carbohydrate kinase 5 312 2.4E-35 T 17-10-2018 IPR011611 Carbohydrate kinase PfkB BJD13_18080 d377c63f1960968cf041b30f2136bb6e 336 Gene3D G3DSA:3.20.20.100 4 324 3.7E-64 T 17-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BJD13_18080 d377c63f1960968cf041b30f2136bb6e 336 SUPERFAMILY SSF51430 7 325 7.07E-64 T 17-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BJD13_18080 d377c63f1960968cf041b30f2136bb6e 336 Pfam PF00248 Aldo/keto reductase family 19 323 8.0E-46 T 17-10-2018 IPR023210 NADP-dependent oxidoreductase domain BJD13_09840 f1cc04ea109b13bc914b6f7d19595aa4 418 SUPERFAMILY SSF81901 108 190 6.93E-6 T 17-10-2018 BJD13_09840 f1cc04ea109b13bc914b6f7d19595aa4 418 SUPERFAMILY SSF81901 7 124 4.19E-12 T 17-10-2018 BJD13_09840 f1cc04ea109b13bc914b6f7d19595aa4 418 SMART SM00671 156 191 45.0 T 17-10-2018 IPR006597 Sel1-like repeat BJD13_09840 f1cc04ea109b13bc914b6f7d19595aa4 418 SMART SM00671 50 85 5.5 T 17-10-2018 IPR006597 Sel1-like repeat BJD13_09840 f1cc04ea109b13bc914b6f7d19595aa4 418 SMART SM00671 18 49 15.0 T 17-10-2018 IPR006597 Sel1-like repeat BJD13_09840 f1cc04ea109b13bc914b6f7d19595aa4 418 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 310 411 5.6E-13 T 17-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 BJD13_09840 f1cc04ea109b13bc914b6f7d19595aa4 418 SMART SM00702 228 411 2.2E-31 T 17-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 BJD13_09840 f1cc04ea109b13bc914b6f7d19595aa4 418 Gene3D G3DSA:1.25.40.10 102 193 4.4E-8 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_09840 f1cc04ea109b13bc914b6f7d19595aa4 418 Gene3D G3DSA:2.60.120.620 219 412 4.8E-46 T 17-10-2018 BJD13_09840 f1cc04ea109b13bc914b6f7d19595aa4 418 Gene3D G3DSA:1.25.40.10 5 101 2.4E-11 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_05655 631bd34201dee708347ec4d84d141459 288 SMART SM00849 15 205 2.1E-21 T 17-10-2018 IPR001279 Metallo-beta-lactamase BJD13_05655 631bd34201dee708347ec4d84d141459 288 SUPERFAMILY SSF56281 8 287 3.11E-45 T 17-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BJD13_05655 631bd34201dee708347ec4d84d141459 288 Gene3D G3DSA:3.60.15.10 2 288 4.1E-105 T 17-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BJD13_05655 631bd34201dee708347ec4d84d141459 288 Pfam PF00753 Metallo-beta-lactamase superfamily 14 205 1.1E-21 T 17-10-2018 IPR001279 Metallo-beta-lactamase BJD13_19430 657a639c7f37cae648cd4d1bec03ba55 309 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 46 219 5.2E-57 T 17-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 BJD13_19430 657a639c7f37cae648cd4d1bec03ba55 309 Gene3D G3DSA:1.10.10.2830 123 235 2.9E-34 T 17-10-2018 BJD13_19430 657a639c7f37cae648cd4d1bec03ba55 309 SUPERFAMILY SSF110849 50 180 4.29E-32 T 17-10-2018 IPR036086 ParB/Sulfiredoxin superfamily BJD13_19430 657a639c7f37cae648cd4d1bec03ba55 309 Gene3D G3DSA:3.90.1530.30 59 122 1.2E-26 T 17-10-2018 BJD13_19430 657a639c7f37cae648cd4d1bec03ba55 309 SMART SM00470 46 136 8.1E-35 T 17-10-2018 IPR003115 ParB/Sulfiredoxin BJD13_19430 657a639c7f37cae648cd4d1bec03ba55 309 Pfam PF02195 ParB-like nuclease domain 50 136 3.3E-27 T 17-10-2018 IPR003115 ParB/Sulfiredoxin BJD13_14790 300e142d08f5277b8f009fc8d1b7ccf1 572 SUPERFAMILY SSF56112 104 330 2.38E-21 T 17-10-2018 IPR011009 Protein kinase-like domain superfamily BJD13_14790 300e142d08f5277b8f009fc8d1b7ccf1 572 Pfam PF03109 ABC1 family 122 240 2.4E-28 T 17-10-2018 IPR004147 UbiB domain BJD13_21835 bac1877fac89ffb3d6fc076b36138abf 460 SUPERFAMILY SSF56954 23 446 2.09E-88 T 17-10-2018 BJD13_21835 bac1877fac89ffb3d6fc076b36138abf 460 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 20 446 1.6E-130 T 17-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 BJD13_21835 bac1877fac89ffb3d6fc076b36138abf 460 Gene3D G3DSA:1.20.1600.10 22 453 5.5E-112 T 17-10-2018 BJD13_21835 bac1877fac89ffb3d6fc076b36138abf 460 Pfam PF02321 Outer membrane efflux protein 24 210 6.8E-25 T 17-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 BJD13_21835 bac1877fac89ffb3d6fc076b36138abf 460 Pfam PF02321 Outer membrane efflux protein 235 431 2.2E-34 T 17-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 BJD13_10485 96930917d57b5c2afb0d58db7ca24963 60 SUPERFAMILY SSF47598 1 56 7.78E-11 T 17-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 BJD13_10485 96930917d57b5c2afb0d58db7ca24963 60 Gene3D G3DSA:1.10.1220.10 1 49 6.7E-9 T 17-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 BJD13_21505 12ca7348abfa2fb2342442f855762a3b 385 Gene3D G3DSA:3.90.1200.10 134 361 6.5E-20 T 17-10-2018 BJD13_21505 12ca7348abfa2fb2342442f855762a3b 385 SUPERFAMILY SSF56112 20 340 5.69E-39 T 17-10-2018 IPR011009 Protein kinase-like domain superfamily BJD13_21505 12ca7348abfa2fb2342442f855762a3b 385 Pfam PF01636 Phosphotransferase enzyme family 57 308 2.5E-28 T 17-10-2018 IPR002575 Aminoglycoside phosphotransferase BJD13_19700 8574ab7e559dcb1a9b1979880f0a7c03 455 Pfam PF07063 Domain of unknown function (DUF1338) 11 410 3.4E-121 T 17-10-2018 IPR009770 Domain of unknown function DUF1338 BJD13_19700 8574ab7e559dcb1a9b1979880f0a7c03 455 SMART SM01150 13 410 3.0E-230 T 17-10-2018 IPR009770 Domain of unknown function DUF1338 BJD13_19700 8574ab7e559dcb1a9b1979880f0a7c03 455 Gene3D G3DSA:3.10.180.80 3 447 1.2E-194 T 17-10-2018 BJD13_14850 a9dff77c92d8c8bbe24f02ca36222639 607 Gene3D G3DSA:3.30.1370.120 114 183 2.3E-16 T 17-10-2018 IPR038591 NolW-like superfamily BJD13_14850 a9dff77c92d8c8bbe24f02ca36222639 607 TIGRFAM TIGR02516 type_III_yscC: type III secretion outer membrane pore, YscC/HrcC family 322 606 8.5E-107 T 17-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 BJD13_14850 a9dff77c92d8c8bbe24f02ca36222639 607 Gene3D G3DSA:3.55.50.30 29 113 1.9E-26 T 17-10-2018 BJD13_14850 a9dff77c92d8c8bbe24f02ca36222639 607 Pfam PF03958 Bacterial type II/III secretion system short domain 186 367 1.6E-17 T 17-10-2018 IPR005644 NolW-like BJD13_14850 a9dff77c92d8c8bbe24f02ca36222639 607 Pfam PF00263 Bacterial type II and III secretion system protein 448 605 7.2E-39 T 17-10-2018 IPR004846 Type II/III secretion system GO:0009306 BJD13_14850 a9dff77c92d8c8bbe24f02ca36222639 607 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 370 390 5.6E-26 T 17-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 BJD13_14850 a9dff77c92d8c8bbe24f02ca36222639 607 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 495 510 5.6E-26 T 17-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 BJD13_14850 a9dff77c92d8c8bbe24f02ca36222639 607 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 198 215 5.6E-26 T 17-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 BJD13_14850 a9dff77c92d8c8bbe24f02ca36222639 607 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 461 480 5.6E-26 T 17-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 BJD13_14850 a9dff77c92d8c8bbe24f02ca36222639 607 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 584 603 5.6E-26 T 17-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 BJD13_14850 a9dff77c92d8c8bbe24f02ca36222639 607 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 551 584 - T 17-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 BJD13_07760 8f44a186da6c38597fd91186e91b579f 210 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 126 139 - T 17-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 BJD13_07760 8f44a186da6c38597fd91186e91b579f 210 Gene3D G3DSA:3.20.20.70 11 209 2.3E-58 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD13_07760 8f44a186da6c38597fd91186e91b579f 210 SUPERFAMILY SSF51569 9 208 1.36E-52 T 17-10-2018 BJD13_07760 8f44a186da6c38597fd91186e91b579f 210 Pfam PF01081 KDPG and KHG aldolase 13 184 2.0E-23 T 17-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 BJD13_23140 9cc44dad10539b3e49ea790491596616 634 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 14 634 33.584 T 17-10-2018 IPR023051 Potassium uptake protein, low affinity, Kup BJD13_23140 9cc44dad10539b3e49ea790491596616 634 Pfam PF02705 K+ potassium transporter 23 555 6.5E-214 T 17-10-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 BJD13_15865 b3dfa67c6bb6d888109e77f874a73b97 553 Gene3D G3DSA:3.40.50.12780 2 439 2.4E-80 T 17-10-2018 BJD13_15865 b3dfa67c6bb6d888109e77f874a73b97 553 SUPERFAMILY SSF56801 8 543 2.09E-87 T 17-10-2018 BJD13_15865 b3dfa67c6bb6d888109e77f874a73b97 553 Pfam PF00501 AMP-binding enzyme 15 444 3.4E-63 T 17-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BJD13_15865 b3dfa67c6bb6d888109e77f874a73b97 553 ProSitePatterns PS00455 Putative AMP-binding domain signature. 178 189 - T 17-10-2018 IPR020845 AMP-binding, conserved site BJD13_22320 fd810472c95d285f28d36c81e57c2ce0 391 Gene3D G3DSA:3.20.20.190 85 353 1.8E-41 T 17-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 BJD13_22320 fd810472c95d285f28d36c81e57c2ce0 391 Pfam PF16670 Phosphoinositide phospholipase C, Ca2+-dependent 49 377 6.6E-130 T 17-10-2018 IPR032075 Phosphoinositide phospholipase C, Ca2+-dependent BJD13_22320 fd810472c95d285f28d36c81e57c2ce0 391 SUPERFAMILY SSF51695 49 319 1.88E-26 T 17-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 BJD13_14885 d03f2a431f762e0f7ca49937e6dae77a 130 TIGRFAM TIGR02558 HrpB2: type III secretion protein HrpB2 11 130 2.8E-43 T 17-10-2018 IPR013391 Type III secretion protein HrpB2 BJD13_14885 d03f2a431f762e0f7ca49937e6dae77a 130 Pfam PF09487 Bacterial type III secretion protein (HrpB2) 17 130 1.1E-37 T 17-10-2018 IPR013391 Type III secretion protein HrpB2 BJD13_16115 ad5614f13799a19a4926cf409c7a5b79 305 Gene3D G3DSA:1.20.1530.20 157 304 4.2E-6 T 17-10-2018 IPR038770 Sodium/solute symporter superfamily BJD13_16115 ad5614f13799a19a4926cf409c7a5b79 305 Pfam PF03547 Membrane transport protein 7 138 3.9E-10 T 17-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 BJD13_16115 ad5614f13799a19a4926cf409c7a5b79 305 Pfam PF03547 Membrane transport protein 161 296 3.0E-14 T 17-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 BJD13_13245 7543c666e7b7899ce00696329e411698 681 Gene3D G3DSA:2.170.130.10 35 158 9.0E-16 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_13245 7543c666e7b7899ce00696329e411698 681 Pfam PF00593 TonB dependent receptor 238 680 1.2E-43 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_13245 7543c666e7b7899ce00696329e411698 681 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 154 1.0E-15 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_13245 7543c666e7b7899ce00696329e411698 681 Gene3D G3DSA:2.40.170.20 159 680 3.2E-71 T 17-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BJD13_13245 7543c666e7b7899ce00696329e411698 681 SUPERFAMILY SSF56935 42 680 5.65E-93 T 17-10-2018 BJD13_15165 e175af251aaff4ae28dcc7ba7be59f3d 394 TIGRFAM TIGR02360 pbenz_hydroxyl: 4-hydroxybenzoate 3-monooxygenase 1 389 6.1E-188 T 17-10-2018 IPR012733 4-hydroxybenzoate 3-monooxygenase GO:0018659|GO:0043639|GO:0050660|GO:0055114 BJD13_15165 e175af251aaff4ae28dcc7ba7be59f3d 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 277 292 6.7E-28 T 17-10-2018 BJD13_15165 e175af251aaff4ae28dcc7ba7be59f3d 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 6.7E-28 T 17-10-2018 BJD13_15165 e175af251aaff4ae28dcc7ba7be59f3d 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 150 165 6.7E-28 T 17-10-2018 BJD13_15165 e175af251aaff4ae28dcc7ba7be59f3d 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 292 308 6.7E-28 T 17-10-2018 BJD13_15165 e175af251aaff4ae28dcc7ba7be59f3d 394 SUPERFAMILY SSF51905 1 388 1.48E-51 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_15165 e175af251aaff4ae28dcc7ba7be59f3d 394 Gene3D G3DSA:3.30.9.10 73 386 1.7E-162 T 17-10-2018 BJD13_15165 e175af251aaff4ae28dcc7ba7be59f3d 394 Gene3D G3DSA:3.50.50.60 2 350 1.7E-162 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_15165 e175af251aaff4ae28dcc7ba7be59f3d 394 SUPERFAMILY SSF54373 174 274 7.85E-44 T 17-10-2018 BJD13_15165 e175af251aaff4ae28dcc7ba7be59f3d 394 Pfam PF01494 FAD binding domain 2 342 6.9E-83 T 17-10-2018 IPR002938 FAD-binding domain GO:0071949 BJD13_22280 2a989943740e766f307283386c63cc13 582 Pfam PF13584 Oxygen tolerance 28 470 2.2E-73 T 17-10-2018 IPR025738 Aerotolerance-related protein BatD BJD13_01915 f8cdd8e0d7c7d795ff3da6de1586a668 171 PIRSF PIRSF014995 1 171 2.0E-73 T 17-10-2018 IPR014469 Protein of unknown function DUF2271 BJD13_01915 f8cdd8e0d7c7d795ff3da6de1586a668 171 Pfam PF10029 Predicted periplasmic protein (DUF2271) 22 163 2.1E-53 T 17-10-2018 IPR014469 Protein of unknown function DUF2271 BJD13_19755 7d1aeda8fb5187a0578d24840dfc7963 579 PIRSF PIRSF000719 8 579 4.7E-268 T 17-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 BJD13_19755 7d1aeda8fb5187a0578d24840dfc7963 579 Pfam PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) 17 575 5.3E-212 T 17-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 BJD13_19755 7d1aeda8fb5187a0578d24840dfc7963 579 ProDom PD043552 KINASE KINASE/PHOSPHATASE ISOCITRATE DEHYDROGENASE 3.1.3.- IDH TRANSFERASE IDHK/P HYDROLASE ENZYME 17 572 0.0 T 17-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 BJD13_19755 7d1aeda8fb5187a0578d24840dfc7963 579 Hamap MF_00747 Isocitrate dehydrogenase kinase/phosphatase [aceK]. 9 579 39.745 T 17-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 BJD13_07730 7047e66a952263c2b838a5afd86d5b70 751 SUPERFAMILY SSF110296 47 428 4.32E-75 T 17-10-2018 BJD13_07730 7047e66a952263c2b838a5afd86d5b70 751 Pfam PF15899 BNR-Asp box repeat 190 201 0.038 T 17-10-2018 IPR002860 BNR repeat BJD13_07730 7047e66a952263c2b838a5afd86d5b70 751 Gene3D G3DSA:2.130.10.10 58 449 4.1E-239 T 17-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BJD13_07730 7047e66a952263c2b838a5afd86d5b70 751 SUPERFAMILY SSF110296 435 749 3.4E-33 T 17-10-2018 BJD13_07730 7047e66a952263c2b838a5afd86d5b70 751 Gene3D G3DSA:2.130.10.10 47 749 4.1E-239 T 17-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BJD13_13560 e307159e714402d844f353ca79b3a8b7 394 Pfam PF00155 Aminotransferase class I and II 39 387 3.9E-52 T 17-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BJD13_13560 e307159e714402d844f353ca79b3a8b7 394 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 237 250 - T 17-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 BJD13_13560 e307159e714402d844f353ca79b3a8b7 394 Gene3D G3DSA:3.40.640.10 11 393 1.5E-115 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD13_13560 e307159e714402d844f353ca79b3a8b7 394 SUPERFAMILY SSF53383 12 393 9.93E-96 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD13_08860 cf21c04172beb009c6f4137a2f8aecda 250 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 106 250 2.5E-27 T 17-10-2018 IPR018636 Protein of unknown function DUF2058 BJD13_20755 ab1dabb9bf01e6ae72e593d216a039aa 355 SUPERFAMILY SSF53335 169 345 1.91E-22 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_20755 ab1dabb9bf01e6ae72e593d216a039aa 355 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 277 283 - T 17-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 BJD13_20755 ab1dabb9bf01e6ae72e593d216a039aa 355 Gene3D G3DSA:3.40.50.150 160 352 9.4E-42 T 17-10-2018 BJD13_20755 ab1dabb9bf01e6ae72e593d216a039aa 355 Gene3D G3DSA:3.40.50.150 28 142 4.6E-6 T 17-10-2018 BJD13_20755 ab1dabb9bf01e6ae72e593d216a039aa 355 Pfam PF05175 Methyltransferase small domain 177 345 3.3E-51 T 17-10-2018 IPR007848 Methyltransferase small domain GO:0008168 BJD13_05155 1d54498f737911401ccf7677412a13d5 162 Pfam PF00293 NUDIX domain 12 134 8.0E-16 T 17-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 BJD13_05155 1d54498f737911401ccf7677412a13d5 162 SUPERFAMILY SSF55811 3 151 7.58E-26 T 17-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BJD13_05155 1d54498f737911401ccf7677412a13d5 162 ProSitePatterns PS00893 Nudix box signature. 43 64 - T 17-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 BJD13_05155 1d54498f737911401ccf7677412a13d5 162 PRINTS PR01402 Mutator MutX protein signature 27 42 1.0E-9 T 17-10-2018 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 BJD13_05155 1d54498f737911401ccf7677412a13d5 162 PRINTS PR01402 Mutator MutX protein signature 105 125 1.0E-9 T 17-10-2018 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 BJD13_05155 1d54498f737911401ccf7677412a13d5 162 PRINTS PR01402 Mutator MutX protein signature 125 142 1.0E-9 T 17-10-2018 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 BJD13_05155 1d54498f737911401ccf7677412a13d5 162 PRINTS PR01402 Mutator MutX protein signature 9 27 1.0E-9 T 17-10-2018 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 BJD13_05155 1d54498f737911401ccf7677412a13d5 162 PRINTS PR01402 Mutator MutX protein signature 74 100 1.0E-9 T 17-10-2018 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 BJD13_05155 1d54498f737911401ccf7677412a13d5 162 Gene3D G3DSA:3.90.79.10 10 155 2.2E-31 T 17-10-2018 BJD13_15065 e64bf5786e0a0f54d9b3e481cdf0efaa 322 SUPERFAMILY SSF53474 19 312 1.94E-69 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_15065 e64bf5786e0a0f54d9b3e481cdf0efaa 322 Gene3D G3DSA:3.40.50.1820 1 320 6.6E-87 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_15065 e64bf5786e0a0f54d9b3e481cdf0efaa 322 Pfam PF07859 alpha/beta hydrolase fold 82 289 2.5E-65 T 17-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 BJD13_04980 40f03c37ae2cd93511ccf32ca17e7f2a 189 SUPERFAMILY SSF48150 8 185 6.04E-71 T 17-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 BJD13_04980 40f03c37ae2cd93511ccf32ca17e7f2a 189 Pfam PF03352 Methyladenine glycosylase 12 184 1.8E-72 T 17-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 BJD13_04980 40f03c37ae2cd93511ccf32ca17e7f2a 189 Gene3D G3DSA:1.10.340.30 7 188 4.1E-76 T 17-10-2018 BJD13_07085 0c2db7cb24be5a2bd75e9482e23282b8 265 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 259 2.2E-46 T 17-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 BJD13_07085 0c2db7cb24be5a2bd75e9482e23282b8 265 Gene3D G3DSA:3.90.226.10 2 200 1.0E-57 T 17-10-2018 BJD13_07085 0c2db7cb24be5a2bd75e9482e23282b8 265 SUPERFAMILY SSF52096 5 259 2.72E-65 T 17-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BJD13_07085 0c2db7cb24be5a2bd75e9482e23282b8 265 Gene3D G3DSA:1.10.12.10 204 264 4.7E-16 T 17-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal BJD13_21145 1d216f604607d6678f5ca32c0cfad0e7 1415 Pfam PF14307 Glycosyltransferase WbsX 816 1153 3.6E-130 T 17-10-2018 IPR032719 Glycosyltransferase WbsX BJD13_21145 1d216f604607d6678f5ca32c0cfad0e7 1415 Pfam PF05045 Rhamnan synthesis protein F 1166 1389 7.6E-42 T 17-10-2018 IPR007739 Rhamnan synthesis F BJD13_21145 1d216f604607d6678f5ca32c0cfad0e7 1415 Gene3D G3DSA:3.20.20.80 813 1163 6.8E-16 T 17-10-2018 BJD13_21145 1d216f604607d6678f5ca32c0cfad0e7 1415 Pfam PF13489 Methyltransferase domain 83 244 1.7E-7 T 17-10-2018 BJD13_21145 1d216f604607d6678f5ca32c0cfad0e7 1415 Gene3D G3DSA:3.40.50.150 74 260 5.9E-23 T 17-10-2018 BJD13_21145 1d216f604607d6678f5ca32c0cfad0e7 1415 SUPERFAMILY SSF53335 75 259 2.71E-23 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_16345 e4ef5f2e3ed8a9c2fa1d163ff0cde08d 558 SUPERFAMILY SSF69572 303 419 1.83E-29 T 17-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 BJD13_16345 e4ef5f2e3ed8a9c2fa1d163ff0cde08d 558 Pfam PF00899 ThiF family 302 508 1.4E-26 T 17-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 BJD13_16345 e4ef5f2e3ed8a9c2fa1d163ff0cde08d 558 Gene3D G3DSA:3.40.50.720 279 530 3.9E-31 T 17-10-2018 BJD13_05335 f32ae35a73e782f08445721d8e6438e9 260 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 31 252 3.9E-84 T 17-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 BJD13_05335 f32ae35a73e782f08445721d8e6438e9 260 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 79 87 - T 17-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 BJD13_05335 f32ae35a73e782f08445721d8e6438e9 260 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 171 182 - T 17-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BJD13_05335 f32ae35a73e782f08445721d8e6438e9 260 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 28 133 2.5E-33 T 17-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 BJD13_05335 f32ae35a73e782f08445721d8e6438e9 260 SUPERFAMILY SSF46548 130 257 1.1E-39 T 17-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 BJD13_05335 f32ae35a73e782f08445721d8e6438e9 260 Pfam PF13534 4Fe-4S dicluster domain 170 243 7.0E-10 T 17-10-2018 BJD13_05335 f32ae35a73e782f08445721d8e6438e9 260 Gene3D G3DSA:1.10.1060.10 129 260 1.0E-58 T 17-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 BJD13_05335 f32ae35a73e782f08445721d8e6438e9 260 Gene3D G3DSA:3.10.20.30 18 128 1.5E-44 T 17-10-2018 IPR012675 Beta-grasp domain superfamily BJD13_05335 f32ae35a73e782f08445721d8e6438e9 260 SUPERFAMILY SSF54292 26 128 4.99E-31 T 17-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 BJD13_15820 e2b0d1dc06f34e1591ed30c7f07f33f8 143 SUPERFAMILY SSF110916 11 101 3.4E-12 T 17-10-2018 BJD13_15820 e2b0d1dc06f34e1591ed30c7f07f33f8 143 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 25 41 - T 17-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 BJD13_15820 e2b0d1dc06f34e1591ed30c7f07f33f8 143 Gene3D G3DSA:3.30.160.20 6 141 9.8E-40 T 17-10-2018 BJD13_15820 e2b0d1dc06f34e1591ed30c7f07f33f8 143 Pfam PF00472 RF-1 domain 12 137 9.0E-22 T 17-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 BJD13_20940 8675e50eacfca3eb6f885f77140282ab 448 SMART SM00387 338 448 1.5E-26 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_20940 8675e50eacfca3eb6f885f77140282ab 448 Gene3D G3DSA:3.30.565.10 310 448 1.4E-30 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_20940 8675e50eacfca3eb6f885f77140282ab 448 SUPERFAMILY SSF47384 231 305 2.55E-6 T 17-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BJD13_20940 8675e50eacfca3eb6f885f77140282ab 448 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 339 447 1.0E-16 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_20940 8675e50eacfca3eb6f885f77140282ab 448 Gene3D G3DSA:1.10.287.130 244 301 2.1E-5 T 17-10-2018 BJD13_20940 8675e50eacfca3eb6f885f77140282ab 448 SUPERFAMILY SSF55874 316 446 1.07E-31 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_20940 8675e50eacfca3eb6f885f77140282ab 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 432 445 2.1E-9 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_20940 8675e50eacfca3eb6f885f77140282ab 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 379 393 2.1E-9 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_20940 8675e50eacfca3eb6f885f77140282ab 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 426 2.1E-9 T 17-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BJD13_22615 f9aa8a98a162c126514f240e29e2328f 261 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 30 244 28.035 T 17-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 BJD13_22615 f9aa8a98a162c126514f240e29e2328f 261 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 55 242 3.3E-46 T 17-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 BJD13_22615 f9aa8a98a162c126514f240e29e2328f 261 Pfam PF02390 Putative methyltransferase 71 239 2.0E-48 T 17-10-2018 BJD13_22615 f9aa8a98a162c126514f240e29e2328f 261 Gene3D G3DSA:3.40.50.150 37 246 9.2E-61 T 17-10-2018 BJD13_22615 f9aa8a98a162c126514f240e29e2328f 261 SUPERFAMILY SSF53335 23 241 8.67E-38 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_12565 2506b528b2da20acba3b410a1162b1bd 348 Gene3D G3DSA:3.40.190.10 35 142 6.0E-11 T 17-10-2018 BJD13_12565 2506b528b2da20acba3b410a1162b1bd 348 Gene3D G3DSA:3.40.190.10 167 341 3.9E-19 T 17-10-2018 BJD13_12565 2506b528b2da20acba3b410a1162b1bd 348 SUPERFAMILY SSF53850 49 284 5.55E-28 T 17-10-2018 BJD13_12565 2506b528b2da20acba3b410a1162b1bd 348 Pfam PF13379 NMT1-like family 37 281 2.6E-20 T 17-10-2018 BJD13_23060 e584120039e31c316b8bfc396f8811c3 265 Pfam PF07859 alpha/beta hydrolase fold 80 215 5.9E-10 T 17-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 BJD13_23060 e584120039e31c316b8bfc396f8811c3 265 Gene3D G3DSA:3.40.50.1820 57 265 5.9E-39 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_23060 e584120039e31c316b8bfc396f8811c3 265 SUPERFAMILY SSF53474 51 263 9.91E-26 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_10095 806f1e610c57a94e9b40a7ea2866fa88 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 1.4E-23 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_10095 806f1e610c57a94e9b40a7ea2866fa88 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 1.4E-23 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_10095 806f1e610c57a94e9b40a7ea2866fa88 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 1.4E-23 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_10095 806f1e610c57a94e9b40a7ea2866fa88 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 1.4E-23 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_10095 806f1e610c57a94e9b40a7ea2866fa88 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 1.4E-23 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_10095 806f1e610c57a94e9b40a7ea2866fa88 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.4E-23 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_10095 806f1e610c57a94e9b40a7ea2866fa88 263 SUPERFAMILY SSF51735 4 256 1.9E-51 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_10095 806f1e610c57a94e9b40a7ea2866fa88 263 Gene3D G3DSA:3.40.50.720 1 256 2.8E-55 T 17-10-2018 BJD13_10095 806f1e610c57a94e9b40a7ea2866fa88 263 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 254 3.8E-35 T 17-10-2018 BJD13_15130 930dac3e7daf3b442505ae4266034547 358 Gene3D G3DSA:3.30.530.90 138 354 7.2E-70 T 17-10-2018 BJD13_15130 930dac3e7daf3b442505ae4266034547 358 Pfam PF00355 Rieske [2Fe-2S] domain 13 93 2.3E-14 T 17-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 BJD13_15130 930dac3e7daf3b442505ae4266034547 358 Gene3D G3DSA:2.102.10.10 10 137 1.9E-34 T 17-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 BJD13_15130 930dac3e7daf3b442505ae4266034547 358 SUPERFAMILY SSF55961 105 352 3.3E-51 T 17-10-2018 BJD13_15130 930dac3e7daf3b442505ae4266034547 358 SUPERFAMILY SSF50022 9 118 1.83E-29 T 17-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 BJD13_09995 0833edc5ac590a3839287df53042b451 266 ProSitePatterns PS00761 Signal peptidases I signature 3. 209 222 - T 17-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 BJD13_09995 0833edc5ac590a3839287df53042b451 266 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 63 79 1.2E-22 T 17-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 BJD13_09995 0833edc5ac590a3839287df53042b451 266 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 204 223 1.2E-22 T 17-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 BJD13_09995 0833edc5ac590a3839287df53042b451 266 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 127 139 1.2E-22 T 17-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 BJD13_09995 0833edc5ac590a3839287df53042b451 266 Gene3D G3DSA:2.10.109.10 61 246 1.1E-60 T 17-10-2018 BJD13_09995 0833edc5ac590a3839287df53042b451 266 Gene3D G3DSA:2.170.230.10 138 203 1.1E-60 T 17-10-2018 BJD13_09995 0833edc5ac590a3839287df53042b451 266 Pfam PF00717 Peptidase S24-like 69 151 1.1E-21 T 17-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C BJD13_09995 0833edc5ac590a3839287df53042b451 266 ProSitePatterns PS00760 Signal peptidases I lysine active site. 129 141 - T 17-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 BJD13_09995 0833edc5ac590a3839287df53042b451 266 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 49 246 3.4E-45 T 17-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 BJD13_09995 0833edc5ac590a3839287df53042b451 266 SUPERFAMILY SSF51306 61 250 1.31E-60 T 17-10-2018 IPR036286 LexA/Signal peptidase-like superfamily BJD13_17955 f2475d181efb142d5339af55a90e4685 259 Gene3D G3DSA:2.180.10.10 1 105 2.1E-26 T 17-10-2018 BJD13_17955 f2475d181efb142d5339af55a90e4685 259 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 29 105 5.7E-19 T 17-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 BJD13_16090 0da210df4c2d1d7b9da0ffd7b92f9ca3 672 Gene3D G3DSA:3.30.870.10 509 586 1.3E-12 T 17-10-2018 BJD13_16090 0da210df4c2d1d7b9da0ffd7b92f9ca3 672 Gene3D G3DSA:3.30.870.10 308 408 2.5E-5 T 17-10-2018 BJD13_16090 0da210df4c2d1d7b9da0ffd7b92f9ca3 672 SUPERFAMILY SSF56024 65 257 5.49E-38 T 17-10-2018 BJD13_16090 0da210df4c2d1d7b9da0ffd7b92f9ca3 672 SMART SM00155 517 544 0.018 T 17-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 BJD13_16090 0da210df4c2d1d7b9da0ffd7b92f9ca3 672 SMART SM00155 186 213 0.0037 T 17-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 BJD13_16090 0da210df4c2d1d7b9da0ffd7b92f9ca3 672 Gene3D G3DSA:3.30.870.10 68 260 3.8E-39 T 17-10-2018 BJD13_16090 0da210df4c2d1d7b9da0ffd7b92f9ca3 672 SUPERFAMILY SSF56024 320 590 6.98E-23 T 17-10-2018 BJD13_16090 0da210df4c2d1d7b9da0ffd7b92f9ca3 672 Pfam PF13091 PLD-like domain 91 245 2.2E-18 T 17-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 BJD13_16090 0da210df4c2d1d7b9da0ffd7b92f9ca3 672 Pfam PF13091 PLD-like domain 520 571 2.3E-9 T 17-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 BJD13_10800 c3a7b6334684139bc4d0d90085452a67 569 Gene3D G3DSA:2.60.120.10 3 140 8.4E-12 T 17-10-2018 IPR014710 RmlC-like jelly roll fold BJD13_10800 c3a7b6334684139bc4d0d90085452a67 569 Gene3D G3DSA:3.50.50.60 232 539 3.4E-87 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_10800 c3a7b6334684139bc4d0d90085452a67 569 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 464 480 3.6E-22 T 17-10-2018 BJD13_10800 c3a7b6334684139bc4d0d90085452a67 569 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 232 251 3.6E-22 T 17-10-2018 BJD13_10800 c3a7b6334684139bc4d0d90085452a67 569 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 500 522 3.6E-22 T 17-10-2018 BJD13_10800 c3a7b6334684139bc4d0d90085452a67 569 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 333 351 3.6E-22 T 17-10-2018 BJD13_10800 c3a7b6334684139bc4d0d90085452a67 569 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 376 394 3.6E-22 T 17-10-2018 BJD13_10800 c3a7b6334684139bc4d0d90085452a67 569 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 372 396 7.3E-30 T 17-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BJD13_10800 c3a7b6334684139bc4d0d90085452a67 569 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 334 342 7.3E-30 T 17-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BJD13_10800 c3a7b6334684139bc4d0d90085452a67 569 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 231 253 7.3E-30 T 17-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BJD13_10800 c3a7b6334684139bc4d0d90085452a67 569 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 264 279 7.3E-30 T 17-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BJD13_10800 c3a7b6334684139bc4d0d90085452a67 569 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 426 442 7.3E-30 T 17-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BJD13_10800 c3a7b6334684139bc4d0d90085452a67 569 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 510 528 7.3E-30 T 17-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BJD13_10800 c3a7b6334684139bc4d0d90085452a67 569 Gene3D G3DSA:3.50.50.60 345 472 3.4E-87 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_10800 c3a7b6334684139bc4d0d90085452a67 569 SUPERFAMILY SSF51206 8 138 1.83E-14 T 17-10-2018 IPR018490 Cyclic nucleotide-binding-like BJD13_10800 c3a7b6334684139bc4d0d90085452a67 569 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 230 536 8.2E-31 T 17-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BJD13_10800 c3a7b6334684139bc4d0d90085452a67 569 Pfam PF00027 Cyclic nucleotide-binding domain 32 117 4.0E-8 T 17-10-2018 IPR000595 Cyclic nucleotide-binding domain BJD13_10800 c3a7b6334684139bc4d0d90085452a67 569 SUPERFAMILY SSF51905 220 547 5.19E-45 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_00265 ba493b9c191f80db8a527efc8db5f632 313 Gene3D G3DSA:3.55.50.30 237 312 4.2E-6 T 17-10-2018 BJD13_00265 ba493b9c191f80db8a527efc8db5f632 313 Pfam PF16220 Domain of unknown function (DUF4880) 11 49 9.7E-8 T 17-10-2018 IPR032623 FecR, N-terminal BJD13_00265 ba493b9c191f80db8a527efc8db5f632 313 Pfam PF04773 FecR protein 101 193 3.2E-23 T 17-10-2018 IPR006860 FecR protein BJD13_00265 ba493b9c191f80db8a527efc8db5f632 313 PIRSF PIRSF018266 2 312 5.5E-71 T 17-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component BJD13_00265 ba493b9c191f80db8a527efc8db5f632 313 Gene3D G3DSA:2.60.120.1440 98 231 1.2E-27 T 17-10-2018 BJD13_14700 b4c293ff6ff31e912b8b6d1e346e4f43 382 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 37 358 4.7E-63 T 17-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 BJD13_14700 b4c293ff6ff31e912b8b6d1e346e4f43 382 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 60 261 1.4E-13 T 17-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BJD13_14700 b4c293ff6ff31e912b8b6d1e346e4f43 382 Gene3D G3DSA:2.40.420.20 39 356 4.2E-64 T 17-10-2018 BJD13_14700 b4c293ff6ff31e912b8b6d1e346e4f43 382 Gene3D G3DSA:2.40.30.170 46 280 4.2E-64 T 17-10-2018 BJD13_14700 b4c293ff6ff31e912b8b6d1e346e4f43 382 SUPERFAMILY SSF111369 51 277 1.03E-19 T 17-10-2018 BJD13_14700 b4c293ff6ff31e912b8b6d1e346e4f43 382 Gene3D G3DSA:1.10.287.470 94 166 4.2E-64 T 17-10-2018 BJD13_14700 b4c293ff6ff31e912b8b6d1e346e4f43 382 Gene3D G3DSA:2.40.50.100 60 206 4.2E-64 T 17-10-2018 BJD13_09605 7dc07fcf3081202d4cb9e401637cd1e2 321 SUPERFAMILY SSF82282 18 318 6.67E-82 T 17-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 BJD13_09605 7dc07fcf3081202d4cb9e401637cd1e2 321 Pfam PF02574 Homocysteine S-methyltransferase 24 317 2.4E-80 T 17-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 BJD13_09605 7dc07fcf3081202d4cb9e401637cd1e2 321 PIRSF PIRSF037505 7 114 2.5E-6 T 17-10-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 BJD13_09605 7dc07fcf3081202d4cb9e401637cd1e2 321 PIRSF PIRSF037505 267 320 2.8 T 17-10-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 BJD13_09605 7dc07fcf3081202d4cb9e401637cd1e2 321 Gene3D G3DSA:3.20.20.330 9 317 1.9E-113 T 17-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 BJD13_10515 624e9a5412d997063bebf14ed9113848 398 SUPERFAMILY SSF55874 276 383 8.12E-14 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_10515 624e9a5412d997063bebf14ed9113848 398 Pfam PF07730 Histidine kinase 199 261 4.0E-15 T 17-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 BJD13_10515 624e9a5412d997063bebf14ed9113848 398 Gene3D G3DSA:3.30.565.10 264 384 2.7E-25 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_21765 114c876ea4f566d739fb7a72e6f7afb0 300 Gene3D G3DSA:1.10.10.10 5 93 1.5E-27 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_21765 114c876ea4f566d739fb7a72e6f7afb0 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.2E-9 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_21765 114c876ea4f566d739fb7a72e6f7afb0 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.2E-9 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_21765 114c876ea4f566d739fb7a72e6f7afb0 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.2E-9 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_21765 114c876ea4f566d739fb7a72e6f7afb0 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 7.1E-23 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_21765 114c876ea4f566d739fb7a72e6f7afb0 300 SUPERFAMILY SSF53850 95 297 1.5E-42 T 17-10-2018 BJD13_21765 114c876ea4f566d739fb7a72e6f7afb0 300 Pfam PF03466 LysR substrate binding domain 93 294 3.4E-42 T 17-10-2018 IPR005119 LysR, substrate-binding BJD13_21765 114c876ea4f566d739fb7a72e6f7afb0 300 Gene3D G3DSA:3.40.190.290 95 298 5.2E-48 T 17-10-2018 BJD13_21765 114c876ea4f566d739fb7a72e6f7afb0 300 SUPERFAMILY SSF46785 4 115 1.19E-25 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_01085 f3d30dbc1f81bd56134e039b0fc896e9 261 SUPERFAMILY SSF101082 29 235 7.98E-36 T 17-10-2018 BJD13_01085 f3d30dbc1f81bd56134e039b0fc896e9 261 TIGRFAM TIGR02780 TrbJ_Ti: P-type conjugative transfer protein TrbJ 12 245 1.4E-62 T 17-10-2018 IPR014147 Type IV conjugative transfer protein TrbJ BJD13_08160 045dd7b55c2b5988a18f1b5f8a8d5329 303 Gene3D G3DSA:3.40.630.30 138 291 2.0E-15 T 17-10-2018 BJD13_08160 045dd7b55c2b5988a18f1b5f8a8d5329 303 Pfam PF13480 Acetyltransferase (GNAT) domain 151 272 1.3E-12 T 17-10-2018 IPR038740 BioF2-like, acetyltransferase domain KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 BJD13_08160 045dd7b55c2b5988a18f1b5f8a8d5329 303 SUPERFAMILY SSF55729 145 295 2.52E-25 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD13_00980 64aeb4dac1d7e4e671dcf030f08ae007 598 Gene3D G3DSA:2.40.50.460 461 597 4.7E-13 T 17-10-2018 BJD13_00980 64aeb4dac1d7e4e671dcf030f08ae007 598 SUPERFAMILY SSF64182 53 471 2.96E-74 T 17-10-2018 IPR038763 DHH phosphoesterase superfamily BJD13_00980 64aeb4dac1d7e4e671dcf030f08ae007 598 Gene3D G3DSA:3.10.310.30 335 460 5.2E-19 T 17-10-2018 BJD13_00980 64aeb4dac1d7e4e671dcf030f08ae007 598 Pfam PF02272 DHHA1 domain 333 458 3.6E-9 T 17-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 BJD13_00980 64aeb4dac1d7e4e671dcf030f08ae007 598 Gene3D G3DSA:3.90.1640.30 51 333 1.4E-64 T 17-10-2018 BJD13_12665 e9913ee27672ffbeb605f3683d276cb7 420 PRINTS PR01021 OMPA domain signature 359 375 1.3E-15 T 17-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BJD13_12665 e9913ee27672ffbeb605f3683d276cb7 420 PRINTS PR01021 OMPA domain signature 314 336 1.3E-15 T 17-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BJD13_12665 e9913ee27672ffbeb605f3683d276cb7 420 PRINTS PR01021 OMPA domain signature 344 359 1.3E-15 T 17-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BJD13_12665 e9913ee27672ffbeb605f3683d276cb7 420 SUPERFAMILY SSF103088 303 418 1.57E-30 T 17-10-2018 IPR036737 OmpA-like domain superfamily BJD13_12665 e9913ee27672ffbeb605f3683d276cb7 420 Gene3D G3DSA:3.30.1330.60 297 420 9.2E-34 T 17-10-2018 IPR036737 OmpA-like domain superfamily BJD13_12665 e9913ee27672ffbeb605f3683d276cb7 420 Pfam PF00691 OmpA family 313 400 2.1E-16 T 17-10-2018 IPR006665 OmpA-like domain BJD13_00850 94c58e5295d123b7a21e0aaf8d1bd4ca 292 SUPERFAMILY SSF52402 17 198 8.16E-17 T 17-10-2018 BJD13_00850 94c58e5295d123b7a21e0aaf8d1bd4ca 292 Gene3D G3DSA:3.40.50.620 3 224 4.9E-33 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD13_00850 94c58e5295d123b7a21e0aaf8d1bd4ca 292 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 18 208 5.7E-11 T 17-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 BJD13_22905 9b077769348114d99abb4349f86711ff 304 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 7 272 1.9E-57 T 17-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 BJD13_22905 9b077769348114d99abb4349f86711ff 304 Pfam PF03186 CobD/Cbib protein 7 284 9.1E-92 T 17-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 BJD13_22905 9b077769348114d99abb4349f86711ff 304 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 304 102.652 T 17-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 BJD13_12600 4101649e9db890308b4c8bd57a24b0dd 81 Pfam PF10636 Hemin uptake protein hemP 46 81 7.6E-18 T 17-10-2018 IPR019600 Hemin uptake protein HemP BJD13_12600 4101649e9db890308b4c8bd57a24b0dd 81 Gene3D G3DSA:2.10.70.10 42 81 1.3E-15 T 17-10-2018 BJD13_15185 14297b0d8b382d6832534d56593f3698 330 Pfam PF13557 Putative MetA-pathway of phenol degradation 72 324 1.9E-51 T 17-10-2018 IPR025737 MetA-pathway of phenol degradation, putative BJD13_05820 8894a045104b8dd94583aa31cab9dbfd 275 Gene3D G3DSA:3.40.50.1820 32 258 3.4E-36 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_05820 8894a045104b8dd94583aa31cab9dbfd 275 SUPERFAMILY SSF53474 33 253 2.46E-28 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_05820 8894a045104b8dd94583aa31cab9dbfd 275 Pfam PF12697 Alpha/beta hydrolase family 38 247 1.5E-16 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD13_19810 00e98a9dbc8daeb98c4d10a0a39d9944 204 Pfam PF03458 UPF0126 domain 93 164 5.7E-19 T 17-10-2018 IPR005115 Uncharacterised domain UPF0126 BJD13_19810 00e98a9dbc8daeb98c4d10a0a39d9944 204 Pfam PF03458 UPF0126 domain 7 81 1.3E-19 T 17-10-2018 IPR005115 Uncharacterised domain UPF0126 BJD13_19905 84d568609b1afcbe9df7b3ce8422335f 241 SUPERFAMILY SSF54523 127 240 8.37E-22 T 17-10-2018 BJD13_19905 84d568609b1afcbe9df7b3ce8422335f 241 Gene3D G3DSA:3.30.700.10 108 241 1.2E-22 T 17-10-2018 BJD13_19905 84d568609b1afcbe9df7b3ce8422335f 241 Pfam PF00114 Pilin (bacterial filament) 134 240 4.7E-15 T 17-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 BJD13_19905 84d568609b1afcbe9df7b3ce8422335f 241 Pfam PF14237 Domain of unknown function (DUF4339) 4 48 1.0E-12 T 17-10-2018 IPR025640 Domain of unknown function DUF4339 Reactome: R-HSA-6798695 BJD13_21240 dcbf5db11109c82373c164965279f55c 695 Pfam PF14307 Glycosyltransferase WbsX 92 428 3.2E-127 T 17-10-2018 IPR032719 Glycosyltransferase WbsX BJD13_21240 dcbf5db11109c82373c164965279f55c 695 Pfam PF05045 Rhamnan synthesis protein F 442 663 2.9E-37 T 17-10-2018 IPR007739 Rhamnan synthesis F BJD13_21240 dcbf5db11109c82373c164965279f55c 695 Gene3D G3DSA:3.20.20.80 88 438 1.3E-18 T 17-10-2018 BJD13_16975 860614a5ef0ab794c7a08c23f1f949d2 368 Gene3D G3DSA:1.20.1050.90 124 303 7.8E-75 T 17-10-2018 BJD13_16975 860614a5ef0ab794c7a08c23f1f949d2 368 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 368 84.699 T 17-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 BJD13_16975 860614a5ef0ab794c7a08c23f1f949d2 368 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 340 4.6E-76 T 17-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 BJD13_16975 860614a5ef0ab794c7a08c23f1f949d2 368 SUPERFAMILY SSF52540 1 337 4.76E-29 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_16975 860614a5ef0ab794c7a08c23f1f949d2 368 Gene3D G3DSA:3.40.50.300 6 339 7.8E-75 T 17-10-2018 BJD13_16975 860614a5ef0ab794c7a08c23f1f949d2 368 ProSitePatterns PS00618 RecF protein signature 2. 304 322 - T 17-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 BJD13_16975 860614a5ef0ab794c7a08c23f1f949d2 368 ProSitePatterns PS00617 RecF protein signature 1. 121 141 - T 17-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 BJD13_16975 860614a5ef0ab794c7a08c23f1f949d2 368 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 340 3.2E-17 T 17-10-2018 IPR003395 RecF/RecN/SMC, N-terminal BJD13_21330 c73aa5155dfc8c08940d74907288aec7 657 SUPERFAMILY SSF53955 475 633 4.04E-45 T 17-10-2018 IPR023346 Lysozyme-like domain superfamily BJD13_21330 c73aa5155dfc8c08940d74907288aec7 657 Gene3D G3DSA:1.10.530.10 468 628 1.1E-44 T 17-10-2018 BJD13_21330 c73aa5155dfc8c08940d74907288aec7 657 Pfam PF01464 Transglycosylase SLT domain 478 590 6.9E-25 T 17-10-2018 IPR008258 Transglycosylase SLT domain 1 BJD13_21330 c73aa5155dfc8c08940d74907288aec7 657 Pfam PF14718 Soluble lytic murein transglycosylase L domain 399 457 3.8E-10 T 17-10-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 BJD13_21330 c73aa5155dfc8c08940d74907288aec7 657 Gene3D G3DSA:1.25.20.10 26 380 5.9E-83 T 17-10-2018 BJD13_21330 c73aa5155dfc8c08940d74907288aec7 657 SUPERFAMILY SSF48435 26 471 2.62E-103 T 17-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 BJD13_20415 c62b31b176b44927dc3073a5549c8216 116 Pfam PF03692 Putative zinc- or iron-chelating domain 21 90 4.0E-9 T 17-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein BJD13_21220 1cbdb0eb6d68c59cc591825dcd387f1e 467 SUPERFAMILY SSF53448 5 279 1.17E-73 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD13_21220 1cbdb0eb6d68c59cc591825dcd387f1e 467 Pfam PF00483 Nucleotidyl transferase 6 285 3.1E-77 T 17-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 BJD13_21220 1cbdb0eb6d68c59cc591825dcd387f1e 467 Gene3D G3DSA:3.90.550.10 3 344 1.3E-121 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD13_21220 1cbdb0eb6d68c59cc591825dcd387f1e 467 Pfam PF01050 Mannose-6-phosphate isomerase 312 462 1.9E-74 T 17-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 BJD13_21220 1cbdb0eb6d68c59cc591825dcd387f1e 467 Gene3D G3DSA:2.60.120.10 345 451 3.5E-18 T 17-10-2018 IPR014710 RmlC-like jelly roll fold BJD13_21220 1cbdb0eb6d68c59cc591825dcd387f1e 467 SUPERFAMILY SSF51182 183 467 2.04E-89 T 17-10-2018 IPR011051 RmlC-like cupin domain superfamily BJD13_21220 1cbdb0eb6d68c59cc591825dcd387f1e 467 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 5 466 1.4E-228 T 17-10-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 BJD13_07400 70dc3fb9f069a7fd6c0cb3e4f66716e5 565 SUPERFAMILY SSF52540 84 550 4.19E-63 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_07400 70dc3fb9f069a7fd6c0cb3e4f66716e5 565 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 105 554 8.1E-112 T 17-10-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 BJD13_07400 70dc3fb9f069a7fd6c0cb3e4f66716e5 565 Gene3D G3DSA:3.40.50.300 303 550 3.1E-44 T 17-10-2018 BJD13_21020 affc1cd342e508e93e26f7ed190050e2 367 SUPERFAMILY SSF53686 5 337 4.85E-66 T 17-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BJD13_21020 affc1cd342e508e93e26f7ed190050e2 367 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 34 320 3.3E-46 T 17-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme BJD13_21020 affc1cd342e508e93e26f7ed190050e2 367 Gene3D G3DSA:3.40.50.1100 50 156 4.2E-66 T 17-10-2018 BJD13_21020 affc1cd342e508e93e26f7ed190050e2 367 Gene3D G3DSA:3.40.50.1100 35 326 4.2E-66 T 17-10-2018 BJD13_18435 3f73baecdba86b554ee03422e17e145d 293 Gene3D G3DSA:1.10.10.10 1 84 8.8E-22 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_18435 3f73baecdba86b554ee03422e17e145d 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 1 56 8.5E-19 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_18435 3f73baecdba86b554ee03422e17e145d 293 Gene3D G3DSA:3.40.190.10 159 264 1.3E-50 T 17-10-2018 BJD13_18435 3f73baecdba86b554ee03422e17e145d 293 SUPERFAMILY SSF53850 83 289 4.96E-36 T 17-10-2018 BJD13_18435 3f73baecdba86b554ee03422e17e145d 293 SUPERFAMILY SSF46785 2 105 6.63E-21 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_18435 3f73baecdba86b554ee03422e17e145d 293 Pfam PF03466 LysR substrate binding domain 82 290 1.8E-31 T 17-10-2018 IPR005119 LysR, substrate-binding BJD13_18435 3f73baecdba86b554ee03422e17e145d 293 Gene3D G3DSA:3.40.190.10 86 288 1.3E-50 T 17-10-2018 BJD13_20370 cd6ed40aa5025e34196a04e46e60777a 478 Pfam PF12040 Domain of unknown function (DUF3526) 271 438 8.7E-48 T 17-10-2018 IPR021913 Protein of unknown function DUF3526 BJD13_20370 cd6ed40aa5025e34196a04e46e60777a 478 Pfam PF12679 ABC-2 family transporter protein 7 262 9.6E-23 T 17-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 BJD13_19590 35b943693d9b9050dbf636e6ca69f3cd 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 17-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_19590 35b943693d9b9050dbf636e6ca69f3cd 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 22.259 T 17-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_19590 35b943693d9b9050dbf636e6ca69f3cd 71 Gene3D G3DSA:1.20.5.1150 16 54 1.7E-20 T 17-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_19590 35b943693d9b9050dbf636e6ca69f3cd 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 3.8E-24 T 17-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_19590 35b943693d9b9050dbf636e6ca69f3cd 71 Pfam PF01165 Ribosomal protein S21 3 56 5.6E-22 T 17-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_19590 35b943693d9b9050dbf636e6ca69f3cd 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 16 44 1.0E-9 T 17-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_19590 35b943693d9b9050dbf636e6ca69f3cd 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 4.1E-16 T 17-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_19590 35b943693d9b9050dbf636e6ca69f3cd 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 4.1E-16 T 17-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_19590 35b943693d9b9050dbf636e6ca69f3cd 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 4.1E-16 T 17-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_19590 35b943693d9b9050dbf636e6ca69f3cd 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 4.1E-16 T 17-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BJD13_21055 3960e450d4f96801dc2151bd3ce3d5c0 216 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 7 215 8.1E-63 T 17-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 BJD13_21055 3960e450d4f96801dc2151bd3ce3d5c0 216 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 74 184 3.1E-10 T 17-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BJD13_21055 3960e450d4f96801dc2151bd3ce3d5c0 216 Gene3D G3DSA:3.40.50.1000 7 206 7.8E-58 T 17-10-2018 IPR023214 HAD superfamily BJD13_21055 3960e450d4f96801dc2151bd3ce3d5c0 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 5.0E-6 T 17-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BJD13_21055 3960e450d4f96801dc2151bd3ce3d5c0 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 100 113 5.0E-6 T 17-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BJD13_21055 3960e450d4f96801dc2151bd3ce3d5c0 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 131 147 5.0E-6 T 17-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BJD13_21055 3960e450d4f96801dc2151bd3ce3d5c0 216 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 102 180 3.2E-7 T 17-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BJD13_21055 3960e450d4f96801dc2151bd3ce3d5c0 216 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 187 1.5E-36 T 17-10-2018 BJD13_21055 3960e450d4f96801dc2151bd3ce3d5c0 216 SUPERFAMILY SSF56784 5 214 5.95E-57 T 17-10-2018 IPR036412 HAD-like superfamily BJD13_21055 3960e450d4f96801dc2151bd3ce3d5c0 216 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 4 216 31.621 T 17-10-2018 IPR037512 Phosphoglycolate phosphatase, prokaryotic GO:0005975|GO:0008967 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 BJD13_21055 3960e450d4f96801dc2151bd3ce3d5c0 216 Gene3D G3DSA:1.10.150.240 19 85 7.8E-58 T 17-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BJD13_15905 a5ed5f09e25e79597e11a454e8a2beec 409 SUPERFAMILY SSF103473 5 392 9.42E-38 T 17-10-2018 IPR036259 MFS transporter superfamily BJD13_15905 a5ed5f09e25e79597e11a454e8a2beec 409 Pfam PF07690 Major Facilitator Superfamily 26 291 2.8E-15 T 17-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD13_15905 a5ed5f09e25e79597e11a454e8a2beec 409 Gene3D G3DSA:1.20.1250.20 14 189 2.5E-18 T 17-10-2018 BJD13_15905 a5ed5f09e25e79597e11a454e8a2beec 409 Gene3D G3DSA:1.20.1250.20 212 395 2.9E-16 T 17-10-2018 BJD13_04540 f22668a1aad0947ec66992dc9d4d5350 230 Pfam PF13419 Haloacid dehalogenase-like hydrolase 16 194 2.4E-29 T 17-10-2018 BJD13_04540 f22668a1aad0947ec66992dc9d4d5350 230 Gene3D G3DSA:1.10.150.240 28 93 3.9E-51 T 17-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BJD13_04540 f22668a1aad0947ec66992dc9d4d5350 230 Gene3D G3DSA:3.40.50.1000 16 214 3.9E-51 T 17-10-2018 IPR023214 HAD superfamily BJD13_04540 f22668a1aad0947ec66992dc9d4d5350 230 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 67 188 1.0E-8 T 17-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BJD13_04540 f22668a1aad0947ec66992dc9d4d5350 230 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 16 221 1.2E-75 T 17-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 BJD13_04540 f22668a1aad0947ec66992dc9d4d5350 230 SUPERFAMILY SSF56784 14 222 3.2E-51 T 17-10-2018 IPR036412 HAD-like superfamily BJD13_04540 f22668a1aad0947ec66992dc9d4d5350 230 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 108 121 8.8E-6 T 17-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BJD13_04540 f22668a1aad0947ec66992dc9d4d5350 230 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 139 155 8.8E-6 T 17-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BJD13_04540 f22668a1aad0947ec66992dc9d4d5350 230 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 13 24 8.8E-6 T 17-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BJD13_04540 f22668a1aad0947ec66992dc9d4d5350 230 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 157 177 8.8E-6 T 17-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BJD13_04540 f22668a1aad0947ec66992dc9d4d5350 230 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 13 222 33.281 T 17-10-2018 IPR037512 Phosphoglycolate phosphatase, prokaryotic GO:0005975|GO:0008967 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 BJD13_10760 33a1fcf6e8a6bff1068659cb4d38d124 439 Pfam PF05559 Protein of unknown function (DUF763) 6 348 2.4E-124 T 17-10-2018 IPR008482 Protein of unknown function DUF763 BJD13_00225 82bf5798751dd70068e5c72edb79cddf 509 Gene3D G3DSA:1.10.275.10 1 195 5.9E-65 T 17-10-2018 IPR024083 Fumarase/histidase, N-terminal BJD13_00225 82bf5798751dd70068e5c72edb79cddf 509 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 137 153 - T 17-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 BJD13_00225 82bf5798751dd70068e5c72edb79cddf 509 SUPERFAMILY SSF48557 2 496 7.85E-191 T 17-10-2018 IPR008948 L-Aspartase-like GO:0003824 BJD13_00225 82bf5798751dd70068e5c72edb79cddf 509 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 3 498 5.0E-212 T 17-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BJD13_00225 82bf5798751dd70068e5c72edb79cddf 509 Gene3D G3DSA:1.20.200.10 196 503 7.9E-121 T 17-10-2018 BJD13_00225 82bf5798751dd70068e5c72edb79cddf 509 Pfam PF00221 Aromatic amino acid lyase 9 469 7.7E-191 T 17-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 BJD13_00225 82bf5798751dd70068e5c72edb79cddf 509 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 1 502 44.157 T 17-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BJD13_13275 9f905fc6bbd760512995ec545f06fa5b 146 Gene3D G3DSA:3.40.50.2300 4 145 2.1E-33 T 17-10-2018 BJD13_13275 9f905fc6bbd760512995ec545f06fa5b 146 SMART SM00448 5 129 8.7E-23 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_13275 9f905fc6bbd760512995ec545f06fa5b 146 SUPERFAMILY SSF52172 6 141 1.34E-29 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_13275 9f905fc6bbd760512995ec545f06fa5b 146 Pfam PF00072 Response regulator receiver domain 7 129 2.8E-18 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_18290 e64a062bb0d570f2e407bbdd54fb1d6a 148 SUPERFAMILY SSF52402 2 148 8.37E-36 T 17-10-2018 BJD13_18290 e64a062bb0d570f2e407bbdd54fb1d6a 148 PIRSF PIRSF006276 1 148 5.9E-18 T 17-10-2018 IPR006015 Universal stress protein A BJD13_18290 e64a062bb0d570f2e407bbdd54fb1d6a 148 Gene3D G3DSA:3.40.50.620 1 148 2.3E-33 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD13_18290 e64a062bb0d570f2e407bbdd54fb1d6a 148 Pfam PF00582 Universal stress protein family 1 148 8.5E-34 T 17-10-2018 IPR006016 UspA BJD13_18290 e64a062bb0d570f2e407bbdd54fb1d6a 148 PRINTS PR01438 Universal stress protein signature 108 120 3.5E-15 T 17-10-2018 IPR006015 Universal stress protein A BJD13_18290 e64a062bb0d570f2e407bbdd54fb1d6a 148 PRINTS PR01438 Universal stress protein signature 2 20 3.5E-15 T 17-10-2018 IPR006015 Universal stress protein A BJD13_18290 e64a062bb0d570f2e407bbdd54fb1d6a 148 PRINTS PR01438 Universal stress protein signature 126 148 3.5E-15 T 17-10-2018 IPR006015 Universal stress protein A BJD13_00515 2ba6cd1a12b93626799b318175551ce1 425 Pfam PF02321 Outer membrane efflux protein 29 210 8.6E-16 T 17-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 BJD13_00515 2ba6cd1a12b93626799b318175551ce1 425 Pfam PF02321 Outer membrane efflux protein 239 409 2.2E-11 T 17-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 BJD13_00515 2ba6cd1a12b93626799b318175551ce1 425 Gene3D G3DSA:1.20.1600.10 14 415 2.1E-42 T 17-10-2018 BJD13_00515 2ba6cd1a12b93626799b318175551ce1 425 SUPERFAMILY SSF56954 3 412 9.02E-56 T 17-10-2018 BJD13_15705 5b78a2b97b96f3eca59da266a4a59d22 174 Pfam PF08808 RES domain 10 163 6.9E-23 T 17-10-2018 IPR014914 RES domain BJD13_15705 5b78a2b97b96f3eca59da266a4a59d22 174 SMART SM00953 23 156 1.4E-16 T 17-10-2018 IPR014914 RES domain BJD13_09725 2ce8af0d0687a7541665e38a978f43bd 235 Pfam PF06197 Protein of unknown function (DUF998) 31 208 4.2E-9 T 17-10-2018 IPR009339 Protein of unknown function DUF998 BJD13_09715 1229c46c5d4c988be36eb4e9679b76be 356 Gene3D G3DSA:3.40.50.150 68 350 7.8E-74 T 17-10-2018 BJD13_09715 1229c46c5d4c988be36eb4e9679b76be 356 Pfam PF02353 Mycolic acid cyclopropane synthetase 77 338 4.8E-36 T 17-10-2018 BJD13_09715 1229c46c5d4c988be36eb4e9679b76be 356 SUPERFAMILY SSF53335 79 352 2.92E-60 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_20360 9713332c10b6d4d4a66d5ed5f05949a2 617 Gene3D G3DSA:3.40.630.10 87 370 8.2E-35 T 17-10-2018 BJD13_20360 9713332c10b6d4d4a66d5ed5f05949a2 617 SMART SM00631 96 323 5.2E-6 T 17-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 BJD13_20360 9713332c10b6d4d4a66d5ed5f05949a2 617 Pfam PF00246 Zinc carboxypeptidase 102 254 9.4E-21 T 17-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 BJD13_20360 9713332c10b6d4d4a66d5ed5f05949a2 617 SUPERFAMILY SSF53187 93 357 9.59E-44 T 17-10-2018 BJD13_03610 f7fbfe0888abe6105de2b9c2dc9dc12e 153 SUPERFAMILY SSF51182 2 142 2.18E-47 T 17-10-2018 IPR011051 RmlC-like cupin domain superfamily BJD13_03610 f7fbfe0888abe6105de2b9c2dc9dc12e 153 Pfam PF06172 Cupin superfamily (DUF985) 7 136 9.0E-42 T 17-10-2018 IPR009327 Cupin domain of unknown function DUF985 BJD13_03610 f7fbfe0888abe6105de2b9c2dc9dc12e 153 Gene3D G3DSA:2.60.120.10 1 148 1.0E-45 T 17-10-2018 IPR014710 RmlC-like jelly roll fold BJD13_05650 58b5588a5782c5705c52f9c9815ff4f8 146 Pfam PF04143 Sulphur transport 11 133 8.7E-9 T 17-10-2018 IPR007272 Sulphur transport domain BJD13_22500 26ea49a10316542c1ace66da95377e34 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 54.975 T 17-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 BJD13_22500 26ea49a10316542c1ace66da95377e34 302 Gene3D G3DSA:3.40.50.620 7 212 1.6E-60 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD13_22500 26ea49a10316542c1ace66da95377e34 302 PIRSF PIRSF002936 2 302 7.9E-146 T 17-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 BJD13_22500 26ea49a10316542c1ace66da95377e34 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 8.9E-148 T 17-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 BJD13_22500 26ea49a10316542c1ace66da95377e34 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 30 257 1.0E-57 T 17-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 BJD13_22500 26ea49a10316542c1ace66da95377e34 302 SUPERFAMILY SSF52402 6 210 3.14E-69 T 17-10-2018 BJD13_19390 baffee85d036bbf0d22a7d7dc2a68ba2 424 Gene3D G3DSA:3.40.50.1950 7 191 1.3E-54 T 17-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 BJD13_19390 baffee85d036bbf0d22a7d7dc2a68ba2 424 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 11 418 1.3E-130 T 17-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 BJD13_19390 baffee85d036bbf0d22a7d7dc2a68ba2 424 SUPERFAMILY SSF102645 211 423 2.35E-72 T 17-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 BJD13_19390 baffee85d036bbf0d22a7d7dc2a68ba2 424 Gene3D G3DSA:3.40.50.10300 208 424 2.1E-74 T 17-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 BJD13_19390 baffee85d036bbf0d22a7d7dc2a68ba2 424 Pfam PF02441 Flavoprotein 14 181 1.2E-42 T 17-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 BJD13_19390 baffee85d036bbf0d22a7d7dc2a68ba2 424 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 212 392 5.6E-68 T 17-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 BJD13_19390 baffee85d036bbf0d22a7d7dc2a68ba2 424 SUPERFAMILY SSF52507 10 183 2.75E-58 T 17-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 BJD13_02025 e6611810ffc8ad2431fa5db80fa07883 376 SUPERFAMILY SSF52540 8 341 4.69E-70 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_02025 e6611810ffc8ad2431fa5db80fa07883 376 Gene3D G3DSA:3.30.450.90 2 102 9.2E-32 T 17-10-2018 BJD13_02025 e6611810ffc8ad2431fa5db80fa07883 376 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 7 347 3.2E-136 T 17-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 BJD13_02025 e6611810ffc8ad2431fa5db80fa07883 376 Pfam PF00437 Type II/IV secretion system protein 12 271 8.5E-35 T 17-10-2018 IPR001482 Type II/IV secretion system protein BJD13_02025 e6611810ffc8ad2431fa5db80fa07883 376 Gene3D G3DSA:3.40.50.300 104 357 6.2E-87 T 17-10-2018 BJD13_07240 735aad9fbdce2877511ca328b6cd6aa0 104 Gene3D G3DSA:3.30.70.100 2 100 1.1E-30 T 17-10-2018 BJD13_07240 735aad9fbdce2877511ca328b6cd6aa0 104 TIGRFAM TIGR02118 TIGR02118: conserved hypothetical protein 1 103 9.0E-36 T 17-10-2018 IPR009799 EthD domain BJD13_07240 735aad9fbdce2877511ca328b6cd6aa0 104 Pfam PF07110 EthD domain 18 92 7.8E-8 T 17-10-2018 IPR009799 EthD domain BJD13_07240 735aad9fbdce2877511ca328b6cd6aa0 104 SUPERFAMILY SSF54909 1 102 2.01E-20 T 17-10-2018 IPR011008 Dimeric alpha-beta barrel BJD13_17760 46a7f0d3b2a85230501b2eff1a860435 340 Pfam PF13964 Kelch motif 52 92 2.7E-6 T 17-10-2018 BJD13_17760 46a7f0d3b2a85230501b2eff1a860435 340 Pfam PF13964 Kelch motif 253 303 4.6E-6 T 17-10-2018 BJD13_17760 46a7f0d3b2a85230501b2eff1a860435 340 Pfam PF13964 Kelch motif 98 146 1.6E-6 T 17-10-2018 BJD13_17760 46a7f0d3b2a85230501b2eff1a860435 340 Gene3D G3DSA:2.120.10.80 224 329 2.6E-20 T 17-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 BJD13_17760 46a7f0d3b2a85230501b2eff1a860435 340 SMART SM00612 159 208 0.073 T 17-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 BJD13_17760 46a7f0d3b2a85230501b2eff1a860435 340 SMART SM00612 209 264 0.11 T 17-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 BJD13_17760 46a7f0d3b2a85230501b2eff1a860435 340 SMART SM00612 106 156 0.0067 T 17-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 BJD13_17760 46a7f0d3b2a85230501b2eff1a860435 340 SMART SM00612 265 313 0.32 T 17-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 BJD13_17760 46a7f0d3b2a85230501b2eff1a860435 340 SUPERFAMILY SSF117281 76 331 5.62E-54 T 17-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 BJD13_17760 46a7f0d3b2a85230501b2eff1a860435 340 Pfam PF01344 Kelch motif 198 245 2.7E-4 T 17-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 BJD13_17760 46a7f0d3b2a85230501b2eff1a860435 340 Pfam PF01344 Kelch motif 147 193 1.1E-6 T 17-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 BJD13_17760 46a7f0d3b2a85230501b2eff1a860435 340 Gene3D G3DSA:2.120.10.80 21 223 4.3E-45 T 17-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 BJD13_20610 dd2e28a3ef37f890749314acb9234247 189 Gene3D G3DSA:3.40.50.360 1 189 5.9E-58 T 17-10-2018 IPR029039 Flavoprotein-like superfamily BJD13_20610 dd2e28a3ef37f890749314acb9234247 189 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 17-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 BJD13_20610 dd2e28a3ef37f890749314acb9234247 189 Pfam PF03358 NADPH-dependent FMN reductase 46 112 9.0E-9 T 17-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 BJD13_20610 dd2e28a3ef37f890749314acb9234247 189 SUPERFAMILY SSF52218 1 188 6.29E-46 T 17-10-2018 IPR029039 Flavoprotein-like superfamily BJD13_11150 88a145a8485f70c5b8cdddf28e9635a6 177 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 12 176 1.3E-27 T 17-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 BJD13_11150 88a145a8485f70c5b8cdddf28e9635a6 177 Pfam PF03843 Outer membrane lipoprotein Slp family 15 162 8.5E-45 T 17-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 BJD13_11150 88a145a8485f70c5b8cdddf28e9635a6 177 PIRSF PIRSF004982 1 177 3.6E-51 T 17-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 BJD13_04910 63201de7410f2d486dd0ec08053f00d2 227 Pfam PF02224 Cytidylate kinase 9 219 2.2E-68 T 17-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 BJD13_04910 63201de7410f2d486dd0ec08053f00d2 227 SUPERFAMILY SSF52540 6 223 3.06E-42 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_04910 63201de7410f2d486dd0ec08053f00d2 227 Gene3D G3DSA:3.40.50.300 1 225 1.4E-74 T 17-10-2018 BJD13_04910 63201de7410f2d486dd0ec08053f00d2 227 Hamap MF_00238 Cytidylate kinase [cmk]. 6 225 33.254 T 17-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 BJD13_04910 63201de7410f2d486dd0ec08053f00d2 227 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 218 1.5E-67 T 17-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 BJD13_04330 b997fec12d8e1a4ec299b9a1b2d809a0 872 Pfam PF01068 ATP dependent DNA ligase domain 241 409 3.9E-24 T 17-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 BJD13_04330 b997fec12d8e1a4ec299b9a1b2d809a0 872 Gene3D G3DSA:3.30.1490.70 238 407 4.5E-44 T 17-10-2018 BJD13_04330 b997fec12d8e1a4ec299b9a1b2d809a0 872 TIGRFAM TIGR02779 NHEJ_ligase_lig: DNA ligase D, ligase domain 229 526 3.3E-82 T 17-10-2018 IPR014146 DNA ligase D, ligase domain BJD13_04330 b997fec12d8e1a4ec299b9a1b2d809a0 872 SUPERFAMILY SSF50249 413 528 9.0E-22 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD13_04330 b997fec12d8e1a4ec299b9a1b2d809a0 872 SUPERFAMILY SSF56091 225 409 1.46E-43 T 17-10-2018 BJD13_04330 b997fec12d8e1a4ec299b9a1b2d809a0 872 Gene3D G3DSA:3.30.470.30 252 366 4.5E-44 T 17-10-2018 BJD13_04330 b997fec12d8e1a4ec299b9a1b2d809a0 872 Gene3D G3DSA:2.40.50.140 412 528 4.5E-25 T 17-10-2018 BJD13_04330 b997fec12d8e1a4ec299b9a1b2d809a0 872 TIGRFAM TIGR02778 ligD_pol: DNA ligase D, polymerase domain 586 828 7.4E-91 T 17-10-2018 IPR014145 DNA ligase D, polymerase domain BJD13_04330 b997fec12d8e1a4ec299b9a1b2d809a0 872 TIGRFAM TIGR02777 LigD_PE_dom: DNA ligase D, 3'-phosphoesterase domain 3 157 5.1E-71 T 17-10-2018 IPR014144 DNA ligase D, 3'-phosphoesterase domain BJD13_04330 b997fec12d8e1a4ec299b9a1b2d809a0 872 Gene3D G3DSA:3.90.920.30 591 871 1.1E-98 T 17-10-2018 BJD13_04330 b997fec12d8e1a4ec299b9a1b2d809a0 872 TIGRFAM TIGR02776 NHEJ_ligase_prk: DNA ligase D 238 857 1.2E-174 T 17-10-2018 IPR014143 DNA ligase D BJD13_04330 b997fec12d8e1a4ec299b9a1b2d809a0 872 Pfam PF04679 ATP dependent DNA ligase C terminal region 428 522 2.3E-16 T 17-10-2018 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 BJD13_04330 b997fec12d8e1a4ec299b9a1b2d809a0 872 Pfam PF13298 DNA polymerase Ligase (LigD) 35 139 7.7E-35 T 17-10-2018 IPR014144 DNA ligase D, 3'-phosphoesterase domain BJD13_12415 a9e1245c8859db347743b3383cf5243c 343 Pfam PF13557 Putative MetA-pathway of phenol degradation 83 337 5.8E-46 T 17-10-2018 IPR025737 MetA-pathway of phenol degradation, putative BJD13_13935 d42cecd7c472fdd655ffc0557e34b7de 125 Gene3D G3DSA:3.30.70.1290 1 49 4.6E-8 T 17-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 BJD13_13800 80ce1513fc917e7f36e292322005365e 312 Gene3D G3DSA:3.40.50.1820 44 310 1.3E-62 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_13800 80ce1513fc917e7f36e292322005365e 312 Pfam PF00756 Putative esterase 60 246 8.2E-17 T 17-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 BJD13_13800 80ce1513fc917e7f36e292322005365e 312 SUPERFAMILY SSF53474 43 302 7.44E-55 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_11735 d920d15d34297e271670db9611c3019b 204 SUPERFAMILY SSF47616 79 202 3.06E-22 T 17-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily BJD13_11735 d920d15d34297e271670db9611c3019b 204 Gene3D G3DSA:3.40.30.10 2 200 7.3E-69 T 17-10-2018 BJD13_11735 d920d15d34297e271670db9611c3019b 204 Pfam PF00043 Glutathione S-transferase, C-terminal domain 124 190 5.4E-10 T 17-10-2018 IPR004046 Glutathione S-transferase, C-terminal BJD13_11735 d920d15d34297e271670db9611c3019b 204 Gene3D G3DSA:1.20.1050.10 79 191 7.3E-69 T 17-10-2018 BJD13_11735 d920d15d34297e271670db9611c3019b 204 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 70 3.1E-9 T 17-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 BJD13_11735 d920d15d34297e271670db9611c3019b 204 SUPERFAMILY SSF52833 1 78 4.17E-16 T 17-10-2018 IPR036249 Thioredoxin-like superfamily BJD13_22885 a37f29aa61cb44bd6b88b0d1cc3be6b0 625 SUPERFAMILY SSF56935 34 621 3.14E-116 T 17-10-2018 BJD13_22885 a37f29aa61cb44bd6b88b0d1cc3be6b0 625 TIGRFAM TIGR01779 TonB-B12: TonB-dependent vitamin B12 receptor 1 623 6.2E-282 T 17-10-2018 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0015420|GO:0015889|GO:0016020 BJD13_22885 a37f29aa61cb44bd6b88b0d1cc3be6b0 625 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 153 5.4E-29 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_22885 a37f29aa61cb44bd6b88b0d1cc3be6b0 625 Gene3D G3DSA:2.40.170.20 162 622 2.3E-112 T 17-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BJD13_22885 a37f29aa61cb44bd6b88b0d1cc3be6b0 625 Pfam PF00593 TonB dependent receptor 192 622 1.3E-52 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_22885 a37f29aa61cb44bd6b88b0d1cc3be6b0 625 Gene3D G3DSA:2.170.130.10 33 158 6.2E-37 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_04410 c339a53995801de217fb5a8a0e667e02 191 Pfam PF07879 PHB/PHA accumulation regulator DNA-binding domain 6 65 6.4E-28 T 17-10-2018 IPR012909 PHA accumulation regulator DNA-binding, N-terminal BJD13_04410 c339a53995801de217fb5a8a0e667e02 191 Pfam PF05233 PHB accumulation regulatory domain 70 109 1.8E-18 T 17-10-2018 IPR007897 PHB accumulation regulatory BJD13_04410 c339a53995801de217fb5a8a0e667e02 191 TIGRFAM TIGR01848 PHA_reg_PhaR: polyhydroxyalkanoate synthesis repressor PhaR 5 111 4.1E-53 T 17-10-2018 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR GO:0006355 BJD13_21485 022ae4c79440d01efb5ed25ff4c87b83 279 Pfam PF00535 Glycosyl transferase family 2 11 125 4.2E-5 T 17-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BJD13_21485 022ae4c79440d01efb5ed25ff4c87b83 279 SUPERFAMILY SSF53448 8 246 2.39E-15 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD13_21485 022ae4c79440d01efb5ed25ff4c87b83 279 Gene3D G3DSA:3.90.550.10 7 227 8.9E-6 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD13_01530 91dc28347e93323a5b6cb02994ab1f45 447 Gene3D G3DSA:2.40.128.260 264 440 3.3E-57 T 17-10-2018 BJD13_01530 91dc28347e93323a5b6cb02994ab1f45 447 Pfam PF03743 Bacterial conjugation TrbI-like protein 260 441 3.3E-58 T 17-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI BJD13_01530 91dc28347e93323a5b6cb02994ab1f45 447 Gene3D G3DSA:1.10.1200.160 387 421 3.3E-57 T 17-10-2018 BJD13_17920 f77a26c6b730ec1fdd6941ca5d3a99da 916 Pfam PF07715 TonB-dependent Receptor Plug Domain 46 163 2.8E-21 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_17920 f77a26c6b730ec1fdd6941ca5d3a99da 916 Pfam PF00593 TonB dependent receptor 373 912 3.3E-41 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_17920 f77a26c6b730ec1fdd6941ca5d3a99da 916 Gene3D G3DSA:2.170.130.10 28 167 3.1E-31 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_17920 f77a26c6b730ec1fdd6941ca5d3a99da 916 SUPERFAMILY SSF56935 32 913 5.86E-90 T 17-10-2018 BJD13_07255 3d02e2d38764cdacc7e8cc69d3dec4c9 166 Pfam PF03073 TspO/MBR family 18 158 2.8E-39 T 17-10-2018 IPR004307 TspO/MBR-related protein GO:0016021 BJD13_07255 3d02e2d38764cdacc7e8cc69d3dec4c9 166 Gene3D G3DSA:1.20.1260.100 7 163 3.7E-46 T 17-10-2018 IPR038330 TspO/MBR-related superfamily BJD13_07255 3d02e2d38764cdacc7e8cc69d3dec4c9 166 PIRSF PIRSF005859 4 162 1.1E-47 T 17-10-2018 IPR004307 TspO/MBR-related protein GO:0016021 BJD13_01330 49f0134eb5801f07c6ee4adf9786503a 1038 Gene3D G3DSA:1.25.10.10 509 698 1.0E-5 T 17-10-2018 IPR011989 Armadillo-like helical BJD13_01330 49f0134eb5801f07c6ee4adf9786503a 1038 SUPERFAMILY SSF48371 344 713 2.69E-6 T 17-10-2018 IPR016024 Armadillo-type fold BJD13_01330 49f0134eb5801f07c6ee4adf9786503a 1038 Pfam PF03377 TAL effector repeat 499 530 6.5E-16 T 17-10-2018 IPR005042 TAL effector repeat BJD13_01330 49f0134eb5801f07c6ee4adf9786503a 1038 Pfam PF03377 TAL effector repeat 429 461 2.0E-17 T 17-10-2018 IPR005042 TAL effector repeat BJD13_01330 49f0134eb5801f07c6ee4adf9786503a 1038 Pfam PF03377 TAL effector repeat 671 701 1.9E-15 T 17-10-2018 IPR005042 TAL effector repeat BJD13_01330 49f0134eb5801f07c6ee4adf9786503a 1038 Pfam PF03377 TAL effector repeat 289 321 1.6E-17 T 17-10-2018 IPR005042 TAL effector repeat BJD13_01330 49f0134eb5801f07c6ee4adf9786503a 1038 Pfam PF03377 TAL effector repeat 394 426 4.0E-17 T 17-10-2018 IPR005042 TAL effector repeat BJD13_01330 49f0134eb5801f07c6ee4adf9786503a 1038 Pfam PF03377 TAL effector repeat 706 737 8.4E-17 T 17-10-2018 IPR005042 TAL effector repeat BJD13_01330 49f0134eb5801f07c6ee4adf9786503a 1038 Pfam PF03377 TAL effector repeat 359 391 3.1E-17 T 17-10-2018 IPR005042 TAL effector repeat BJD13_01330 49f0134eb5801f07c6ee4adf9786503a 1038 Pfam PF03377 TAL effector repeat 533 564 7.2E-17 T 17-10-2018 IPR005042 TAL effector repeat BJD13_01330 49f0134eb5801f07c6ee4adf9786503a 1038 Pfam PF03377 TAL effector repeat 775 800 2.4E-4 T 17-10-2018 IPR005042 TAL effector repeat BJD13_01330 49f0134eb5801f07c6ee4adf9786503a 1038 Pfam PF03377 TAL effector repeat 464 496 1.3E-16 T 17-10-2018 IPR005042 TAL effector repeat BJD13_01330 49f0134eb5801f07c6ee4adf9786503a 1038 Pfam PF03377 TAL effector repeat 324 356 2.4E-14 T 17-10-2018 IPR005042 TAL effector repeat BJD13_01330 49f0134eb5801f07c6ee4adf9786503a 1038 Pfam PF03377 TAL effector repeat 601 633 4.0E-17 T 17-10-2018 IPR005042 TAL effector repeat BJD13_01330 49f0134eb5801f07c6ee4adf9786503a 1038 Pfam PF03377 TAL effector repeat 567 598 4.7E-17 T 17-10-2018 IPR005042 TAL effector repeat BJD13_01330 49f0134eb5801f07c6ee4adf9786503a 1038 Pfam PF03377 TAL effector repeat 636 668 2.6E-16 T 17-10-2018 IPR005042 TAL effector repeat BJD13_01330 49f0134eb5801f07c6ee4adf9786503a 1038 Pfam PF03377 TAL effector repeat 740 769 7.7E-12 T 17-10-2018 IPR005042 TAL effector repeat BJD13_02190 0a701668ec96f582d5b741856f5c9b16 254 Gene3D G3DSA:1.25.40.20 48 225 4.3E-34 T 17-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily BJD13_02190 0a701668ec96f582d5b741856f5c9b16 254 SMART SM00248 145 174 9.8 T 17-10-2018 IPR002110 Ankyrin repeat GO:0005515 BJD13_02190 0a701668ec96f582d5b741856f5c9b16 254 SMART SM00248 78 107 16.0 T 17-10-2018 IPR002110 Ankyrin repeat GO:0005515 BJD13_02190 0a701668ec96f582d5b741856f5c9b16 254 SMART SM00248 178 208 19.0 T 17-10-2018 IPR002110 Ankyrin repeat GO:0005515 BJD13_02190 0a701668ec96f582d5b741856f5c9b16 254 SMART SM00248 111 140 0.5 T 17-10-2018 IPR002110 Ankyrin repeat GO:0005515 BJD13_02190 0a701668ec96f582d5b741856f5c9b16 254 Pfam PF12796 Ankyrin repeats (3 copies) 98 175 3.4E-9 T 17-10-2018 IPR020683 Ankyrin repeat-containing domain BJD13_02190 0a701668ec96f582d5b741856f5c9b16 254 SUPERFAMILY SSF48403 49 226 1.38E-29 T 17-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily BJD13_17930 e84055ad9a486576882712a20fce000d 1284 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 954 1282 1.5E-56 T 17-10-2018 IPR007452 Translocation and assembly module TamB BJD13_22350 2d43ec0e961506f50f1cebf1837bbc8e 230 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 30 223 1.7E-20 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD13_22350 2d43ec0e961506f50f1cebf1837bbc8e 230 Gene3D G3DSA:1.10.3720.10 2 224 9.7E-59 T 17-10-2018 IPR035906 MetI-like superfamily BJD13_22350 2d43ec0e961506f50f1cebf1837bbc8e 230 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 14 223 9.1E-66 T 17-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 BJD13_22350 2d43ec0e961506f50f1cebf1837bbc8e 230 SUPERFAMILY SSF161098 5 221 1.03E-48 T 17-10-2018 IPR035906 MetI-like superfamily BJD13_03010 9e5933f2afba90ca194fa735d319b4ac 367 SUPERFAMILY SSF103263 4 351 7.19E-140 T 17-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BJD13_03010 9e5933f2afba90ca194fa735d319b4ac 367 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 17-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BJD13_03010 9e5933f2afba90ca194fa735d319b4ac 367 Gene3D G3DSA:3.60.150.10 1 361 2.0E-144 T 17-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BJD13_03010 9e5933f2afba90ca194fa735d319b4ac 367 Pfam PF01264 Chorismate synthase 10 345 2.8E-130 T 17-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BJD13_03010 9e5933f2afba90ca194fa735d319b4ac 367 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 17-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BJD13_03010 9e5933f2afba90ca194fa735d319b4ac 367 Hamap MF_00300 Chorismate synthase [aroC]. 10 354 34.879 T 17-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BJD13_03010 9e5933f2afba90ca194fa735d319b4ac 367 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 4.8E-132 T 17-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BJD13_03010 9e5933f2afba90ca194fa735d319b4ac 367 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 17-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BJD13_03010 9e5933f2afba90ca194fa735d319b4ac 367 PIRSF PIRSF001456 3 361 2.2E-130 T 17-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BJD13_20965 0c5a76ed9cee889923d8157025eaa57f 239 SMART SM00382 30 217 8.2E-17 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_20965 0c5a76ed9cee889923d8157025eaa57f 239 SUPERFAMILY SSF52540 1 233 1.82E-71 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_20965 0c5a76ed9cee889923d8157025eaa57f 239 Pfam PF00005 ABC transporter 21 169 2.7E-29 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD13_20965 0c5a76ed9cee889923d8157025eaa57f 239 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD13_20965 0c5a76ed9cee889923d8157025eaa57f 239 Gene3D G3DSA:3.40.50.300 1 238 1.9E-67 T 17-10-2018 BJD13_12395 97446f0bc8b883e2223a23fac6144b60 333 Gene3D G3DSA:3.40.190.10 104 289 8.4E-37 T 17-10-2018 BJD13_12395 97446f0bc8b883e2223a23fac6144b60 333 Pfam PF03466 LysR substrate binding domain 103 306 9.4E-30 T 17-10-2018 IPR005119 LysR, substrate-binding BJD13_12395 97446f0bc8b883e2223a23fac6144b60 333 SUPERFAMILY SSF53850 103 308 8.69E-30 T 17-10-2018 BJD13_12395 97446f0bc8b883e2223a23fac6144b60 333 SUPERFAMILY SSF46785 10 121 5.01E-18 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_12395 97446f0bc8b883e2223a23fac6144b60 333 Gene3D G3DSA:3.40.190.10 177 278 8.4E-37 T 17-10-2018 BJD13_12395 97446f0bc8b883e2223a23fac6144b60 333 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 50 61 1.5E-6 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_12395 97446f0bc8b883e2223a23fac6144b60 333 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 40 1.5E-6 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_12395 97446f0bc8b883e2223a23fac6144b60 333 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 50 1.5E-6 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_12395 97446f0bc8b883e2223a23fac6144b60 333 Gene3D G3DSA:1.10.10.10 11 98 1.2E-19 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_12395 97446f0bc8b883e2223a23fac6144b60 333 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 73 6.1E-16 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_22780 6b39dda2e127344b95a9bbad840326e1 325 Gene3D G3DSA:3.20.20.80 40 312 2.2E-16 T 17-10-2018 BJD13_22780 6b39dda2e127344b95a9bbad840326e1 325 SUPERFAMILY SSF51445 26 307 1.88E-28 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily BJD13_09565 10c9ca7b2d10f6f9b1cc5388fd0e05e5 435 TIGRFAM TIGR01849 PHB_depoly_PhaZ: polyhydroxyalkanoate depolymerase, intracellular 2 412 2.2E-208 T 17-10-2018 IPR010915 Polyhydroxyalkanoate depolymerase BJD13_09565 10c9ca7b2d10f6f9b1cc5388fd0e05e5 435 SUPERFAMILY SSF53474 106 409 9.71E-33 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_09565 10c9ca7b2d10f6f9b1cc5388fd0e05e5 435 Pfam PF06850 PHB de-polymerase C-terminus 211 412 1.8E-100 T 17-10-2018 IPR009656 PHB de-polymerase, C-terminal BJD13_09565 10c9ca7b2d10f6f9b1cc5388fd0e05e5 435 PIRSF PIRSF020818 1 424 1.1E-200 T 17-10-2018 IPR010915 Polyhydroxyalkanoate depolymerase BJD13_18545 4645f0a471400955797a830142eb31d0 449 Pfam PF04820 Tryptophan halogenase 14 96 6.4E-11 T 17-10-2018 IPR006905 Flavin-dependent halogenase BJD13_18545 4645f0a471400955797a830142eb31d0 449 Pfam PF04820 Tryptophan halogenase 102 362 2.8E-17 T 17-10-2018 IPR006905 Flavin-dependent halogenase BJD13_18545 4645f0a471400955797a830142eb31d0 449 SUPERFAMILY SSF51905 13 349 1.44E-39 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_18545 4645f0a471400955797a830142eb31d0 449 Gene3D G3DSA:3.50.50.60 11 424 2.2E-118 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_18545 4645f0a471400955797a830142eb31d0 449 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 14 36 2.1E-7 T 17-10-2018 BJD13_18545 4645f0a471400955797a830142eb31d0 449 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 291 306 2.1E-7 T 17-10-2018 BJD13_18545 4645f0a471400955797a830142eb31d0 449 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 161 176 2.1E-7 T 17-10-2018 BJD13_04580 439e1096c198fd82af45fb459f8948c5 469 Pfam PF06751 Ethanolamine ammonia lyase large subunit (EutB) 13 440 4.0E-221 T 17-10-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 BJD13_04580 439e1096c198fd82af45fb459f8948c5 469 Gene3D G3DSA:1.10.220.70 56 142 8.2E-35 T 17-10-2018 BJD13_04580 439e1096c198fd82af45fb459f8948c5 469 Gene3D G3DSA:2.30.170.30 4 55 1.4E-20 T 17-10-2018 BJD13_04580 439e1096c198fd82af45fb459f8948c5 469 Gene3D G3DSA:3.20.20.70 143 451 1.0E-148 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD13_04580 439e1096c198fd82af45fb459f8948c5 469 PIRSF PIRSF018788 2 461 1.8E-240 T 17-10-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 BJD13_12220 c2aa6cc892f36c212befd337a1047bb6 183 SUPERFAMILY SSF55811 5 173 1.31E-28 T 17-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BJD13_12220 c2aa6cc892f36c212befd337a1047bb6 183 Gene3D G3DSA:3.90.79.10 9 181 8.5E-32 T 17-10-2018 BJD13_12220 c2aa6cc892f36c212befd337a1047bb6 183 Pfam PF00293 NUDIX domain 37 103 1.2E-7 T 17-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 BJD13_05180 3dfe064bbbbb26bdf49bcaa74a1b0a11 65 Pfam PF04024 PspC domain 6 62 5.4E-19 T 17-10-2018 IPR007168 Phage shock protein, PspC, N-terminal BJD13_02920 8f0ce5b2aadef9f439da56b4edda53d8 996 Pfam PF07715 TonB-dependent Receptor Plug Domain 61 173 4.2E-23 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_02920 8f0ce5b2aadef9f439da56b4edda53d8 996 Gene3D G3DSA:2.170.130.10 40 177 2.0E-37 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_02920 8f0ce5b2aadef9f439da56b4edda53d8 996 Pfam PF00593 TonB dependent receptor 440 995 5.6E-49 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_02920 8f0ce5b2aadef9f439da56b4edda53d8 996 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 979 996 - T 17-10-2018 IPR010917 TonB-dependent receptor, conserved site BJD13_02920 8f0ce5b2aadef9f439da56b4edda53d8 996 SUPERFAMILY SSF56935 47 996 7.69E-101 T 17-10-2018 BJD13_05605 ceef806ab9a0a23eab397372e479f616 252 Pfam PF02585 GlcNAc-PI de-N-acetylase 45 169 1.6E-26 T 17-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 BJD13_05605 ceef806ab9a0a23eab397372e479f616 252 SUPERFAMILY SSF102588 41 250 7.85E-45 T 17-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 BJD13_05605 ceef806ab9a0a23eab397372e479f616 252 Gene3D G3DSA:3.40.50.10320 38 239 1.3E-41 T 17-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 BJD13_02040 70e7e7d8435de8b50a5e3073a96c8821 298 Pfam PF01904 Protein of unknown function DUF72 20 284 7.7E-72 T 17-10-2018 IPR002763 Protein of unknown function DUF72 BJD13_02040 70e7e7d8435de8b50a5e3073a96c8821 298 Gene3D G3DSA:3.20.20.410 1 288 1.3E-65 T 17-10-2018 IPR036520 UPF0759 superfamily BJD13_02040 70e7e7d8435de8b50a5e3073a96c8821 298 SUPERFAMILY SSF117396 1 287 1.22E-83 T 17-10-2018 IPR036520 UPF0759 superfamily BJD13_23520 3786e32e284f2816a6fa577bb4b7fbbe 780 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 43 765 1.2E-201 T 17-10-2018 IPR005887 Alpha-1,2-mannosidase, putative BJD13_23520 3786e32e284f2816a6fa577bb4b7fbbe 780 SUPERFAMILY SSF48208 296 749 5.67E-29 T 17-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 BJD13_23520 3786e32e284f2816a6fa577bb4b7fbbe 780 Pfam PF07971 Glycosyl hydrolase family 92 277 762 4.0E-172 T 17-10-2018 IPR012939 Glycosyl hydrolase family 92 BJD13_23520 3786e32e284f2816a6fa577bb4b7fbbe 780 Gene3D G3DSA:3.30.2080.10 331 765 2.0E-254 T 17-10-2018 BJD13_23520 3786e32e284f2816a6fa577bb4b7fbbe 780 Gene3D G3DSA:2.70.98.10 48 384 2.0E-254 T 17-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 BJD13_23520 3786e32e284f2816a6fa577bb4b7fbbe 780 Gene3D G3DSA:1.20.1610.10 475 637 2.0E-254 T 17-10-2018 BJD13_23520 3786e32e284f2816a6fa577bb4b7fbbe 780 Gene3D G3DSA:1.20.1050.60 385 474 2.0E-254 T 17-10-2018 BJD13_02670 067c24f38a540dea9e323e3e851c6989 295 SUPERFAMILY SSF103481 195 293 1.7E-18 T 17-10-2018 BJD13_02670 067c24f38a540dea9e323e3e851c6989 295 SUPERFAMILY SSF103481 51 151 7.32E-19 T 17-10-2018 BJD13_02670 067c24f38a540dea9e323e3e851c6989 295 Pfam PF00892 EamA-like transporter family 26 148 5.5E-21 T 17-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BJD13_02670 067c24f38a540dea9e323e3e851c6989 295 Pfam PF00892 EamA-like transporter family 161 290 1.1E-20 T 17-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BJD13_09060 7bdfb020e31e606845fde06bcbb5f04b 143 Gene3D G3DSA:3.30.530.20 1 140 4.6E-27 T 17-10-2018 IPR023393 START-like domain superfamily BJD13_09060 7bdfb020e31e606845fde06bcbb5f04b 143 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 134 9.3E-26 T 17-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 BJD13_09060 7bdfb020e31e606845fde06bcbb5f04b 143 SUPERFAMILY SSF55961 1 140 1.49E-33 T 17-10-2018 BJD13_21110 9b4246b94af4c07d07639b2a1696cb47 127 Pfam PF14346 Domain of unknown function (DUF4398) 20 117 1.7E-16 T 17-10-2018 IPR025511 Domain of unknown function DUF4398 BJD13_21110 9b4246b94af4c07d07639b2a1696cb47 127 Gene3D G3DSA:1.20.1270.390 27 123 7.3E-8 T 17-10-2018 BJD13_17980 622a4261d9ea007b1c6ed4aff03a8094 149 SUPERFAMILY SSF52304 1 137 2.22E-20 T 17-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 BJD13_17980 622a4261d9ea007b1c6ed4aff03a8094 149 PIRSF PIRSF001399 1 138 8.3E-5 T 17-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 BJD13_17980 622a4261d9ea007b1c6ed4aff03a8094 149 Gene3D G3DSA:3.40.50.9100 1 137 6.8E-10 T 17-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 BJD13_17980 622a4261d9ea007b1c6ed4aff03a8094 149 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 3 134 2.0E-6 T 17-10-2018 BJD13_17540 44d4c387a28d83259e6346d80457924a 533 PIRSF PIRSF006281 1 526 9.0E-209 T 17-10-2018 IPR014438 Glucan biosynthesis protein MdoG/MdoD BJD13_17540 44d4c387a28d83259e6346d80457924a 533 Hamap MF_01068 Glucans biosynthesis protein D [mdoD]. 1 532 63.081 T 17-10-2018 IPR023724 Glucan biosynthesis, MdoD BJD13_17540 44d4c387a28d83259e6346d80457924a 533 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 43 522 9.7E-196 T 17-10-2018 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 BJD13_17540 44d4c387a28d83259e6346d80457924a 533 SUPERFAMILY SSF74650 43 412 8.16E-156 T 17-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 BJD13_17540 44d4c387a28d83259e6346d80457924a 533 Gene3D G3DSA:2.60.40.10 416 529 1.5E-17 T 17-10-2018 IPR013783 Immunoglobulin-like fold BJD13_17540 44d4c387a28d83259e6346d80457924a 533 SUPERFAMILY SSF81296 413 525 1.23E-28 T 17-10-2018 IPR014756 Immunoglobulin E-set BJD13_17540 44d4c387a28d83259e6346d80457924a 533 Gene3D G3DSA:2.70.98.10 42 413 1.1E-153 T 17-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 BJD13_23255 fbf906958bf5c44faf70bd3ee735c39a 134 SMART SM00448 8 119 1.0E-10 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_23255 fbf906958bf5c44faf70bd3ee735c39a 134 Gene3D G3DSA:3.40.50.2300 1 131 1.0E-21 T 17-10-2018 BJD13_23255 fbf906958bf5c44faf70bd3ee735c39a 134 SUPERFAMILY SSF52172 8 129 2.56E-22 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_23255 fbf906958bf5c44faf70bd3ee735c39a 134 Pfam PF00072 Response regulator receiver domain 10 120 5.8E-12 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_07700 149cd810456aa76228d3fbf197579950 445 TIGRFAM TIGR02630 xylose_isom_A: xylose isomerase 12 443 1.8E-212 T 17-10-2018 IPR013452 Xylose isomerase, bacterial-type GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 BJD13_07700 149cd810456aa76228d3fbf197579950 445 Hamap MF_00455 Xylose isomerase [xylA]. 19 443 53.609 T 17-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 BJD13_07700 149cd810456aa76228d3fbf197579950 445 PRINTS PR00688 Xylose isomerase signature 188 209 3.7E-79 T 17-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 BJD13_07700 149cd810456aa76228d3fbf197579950 445 PRINTS PR00688 Xylose isomerase signature 141 161 3.7E-79 T 17-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 BJD13_07700 149cd810456aa76228d3fbf197579950 445 PRINTS PR00688 Xylose isomerase signature 341 352 3.7E-79 T 17-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 BJD13_07700 149cd810456aa76228d3fbf197579950 445 PRINTS PR00688 Xylose isomerase signature 164 183 3.7E-79 T 17-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 BJD13_07700 149cd810456aa76228d3fbf197579950 445 PRINTS PR00688 Xylose isomerase signature 237 261 3.7E-79 T 17-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 BJD13_07700 149cd810456aa76228d3fbf197579950 445 PRINTS PR00688 Xylose isomerase signature 279 306 3.7E-79 T 17-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 BJD13_07700 149cd810456aa76228d3fbf197579950 445 PRINTS PR00688 Xylose isomerase signature 308 319 3.7E-79 T 17-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 BJD13_07700 149cd810456aa76228d3fbf197579950 445 PRINTS PR00688 Xylose isomerase signature 215 234 3.7E-79 T 17-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 BJD13_07700 149cd810456aa76228d3fbf197579950 445 PRINTS PR00688 Xylose isomerase signature 100 122 3.7E-79 T 17-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 BJD13_07700 149cd810456aa76228d3fbf197579950 445 SUPERFAMILY SSF51658 11 443 8.86E-162 T 17-10-2018 IPR036237 Xylose isomerase-like superfamily BJD13_07700 149cd810456aa76228d3fbf197579950 445 Gene3D G3DSA:3.20.20.150 10 445 1.1E-177 T 17-10-2018 BJD13_19100 caa94be33d5046f217ef6b3432701c4d 391 Pfam PF07730 Histidine kinase 191 257 1.9E-18 T 17-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 BJD13_19100 caa94be33d5046f217ef6b3432701c4d 391 Gene3D G3DSA:3.30.565.10 257 374 1.5E-23 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_19100 caa94be33d5046f217ef6b3432701c4d 391 SUPERFAMILY SSF55874 272 374 1.51E-10 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_21585 4613ee5e788943620bcdb28633c76b2e 140 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 5 115 8.5E-42 T 17-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 BJD13_21585 4613ee5e788943620bcdb28633c76b2e 140 Pfam PF03960 ArsC family 7 112 5.8E-14 T 17-10-2018 IPR006660 Arsenate reductase-like BJD13_21585 4613ee5e788943620bcdb28633c76b2e 140 Gene3D G3DSA:3.40.30.10 1 139 1.4E-52 T 17-10-2018 BJD13_21585 4613ee5e788943620bcdb28633c76b2e 140 SUPERFAMILY SSF52833 4 133 7.23E-36 T 17-10-2018 IPR036249 Thioredoxin-like superfamily BJD13_08295 bc44bf3b5a9112758ea2f37220baddfc 396 SUPERFAMILY SSF51905 4 369 8.42E-50 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_08295 bc44bf3b5a9112758ea2f37220baddfc 396 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 150 165 8.1E-10 T 17-10-2018 BJD13_08295 bc44bf3b5a9112758ea2f37220baddfc 396 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 8.1E-10 T 17-10-2018 BJD13_08295 bc44bf3b5a9112758ea2f37220baddfc 396 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 282 297 8.1E-10 T 17-10-2018 BJD13_08295 bc44bf3b5a9112758ea2f37220baddfc 396 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 313 8.1E-10 T 17-10-2018 BJD13_08295 bc44bf3b5a9112758ea2f37220baddfc 396 Gene3D G3DSA:3.50.50.60 7 342 1.5E-66 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_08295 bc44bf3b5a9112758ea2f37220baddfc 396 Pfam PF01494 FAD binding domain 5 336 5.0E-23 T 17-10-2018 IPR002938 FAD-binding domain GO:0071949 BJD13_08295 bc44bf3b5a9112758ea2f37220baddfc 396 Gene3D G3DSA:3.30.9.50 40 272 1.5E-66 T 17-10-2018 BJD13_03955 9a8babb591278fc9144a184f6d5cba53 277 Pfam PF14022 Protein of unknown function (DUF4238) 3 258 1.5E-28 T 17-10-2018 IPR025332 Protein of unknown function DUF4238 BJD13_02955 d0e16d81c0310a35c861ba8bca5ae971 220 Pfam PF01738 Dienelactone hydrolase family 15 218 4.6E-37 T 17-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 BJD13_02955 d0e16d81c0310a35c861ba8bca5ae971 220 Gene3D G3DSA:3.40.50.1820 4 217 9.5E-40 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_02955 d0e16d81c0310a35c861ba8bca5ae971 220 SUPERFAMILY SSF53474 3 220 1.59E-35 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_17880 d558e93505fc261464bc58600bd5a084 250 Gene3D G3DSA:3.40.50.880 13 245 2.2E-50 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD13_17880 d558e93505fc261464bc58600bd5a084 250 SUPERFAMILY SSF52317 38 205 4.03E-39 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD13_17880 d558e93505fc261464bc58600bd5a084 250 Pfam PF00117 Glutamine amidotransferase class-I 54 193 1.6E-20 T 17-10-2018 IPR017926 Glutamine amidotransferase BJD13_09765 0e2c6966e3ebe4f010db9b42212caafc 403 Gene3D G3DSA:1.20.1250.20 13 207 1.7E-32 T 17-10-2018 BJD13_09765 0e2c6966e3ebe4f010db9b42212caafc 403 Pfam PF07690 Major Facilitator Superfamily 23 278 3.5E-34 T 17-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD13_09765 0e2c6966e3ebe4f010db9b42212caafc 403 Gene3D G3DSA:1.20.1250.20 209 398 7.5E-19 T 17-10-2018 BJD13_09765 0e2c6966e3ebe4f010db9b42212caafc 403 SUPERFAMILY SSF103473 8 395 3.01E-61 T 17-10-2018 IPR036259 MFS transporter superfamily BJD13_01785 5acfdb0d331ef74faf9b4ae743250923 239 Gene3D G3DSA:3.40.50.300 2 239 4.4E-69 T 17-10-2018 BJD13_01785 5acfdb0d331ef74faf9b4ae743250923 239 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 2 239 3.4E-115 T 17-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 BJD13_01785 5acfdb0d331ef74faf9b4ae743250923 239 Pfam PF00005 ABC transporter 18 164 7.7E-33 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD13_01785 5acfdb0d331ef74faf9b4ae743250923 239 SMART SM00382 26 229 1.9E-7 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_01785 5acfdb0d331ef74faf9b4ae743250923 239 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 213 234 4.7E-6 T 17-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal BJD13_01785 5acfdb0d331ef74faf9b4ae743250923 239 SUPERFAMILY SSF52540 2 235 2.37E-64 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_03390 ac3ac63186d83703535d081a777626b2 276 Pfam PF01464 Transglycosylase SLT domain 14 133 1.8E-9 T 17-10-2018 IPR008258 Transglycosylase SLT domain 1 BJD13_03390 ac3ac63186d83703535d081a777626b2 276 Gene3D G3DSA:1.10.530.10 7 141 2.8E-5 T 17-10-2018 BJD13_03390 ac3ac63186d83703535d081a777626b2 276 SUPERFAMILY SSF53955 11 137 9.85E-12 T 17-10-2018 IPR023346 Lysozyme-like domain superfamily BJD13_02935 13410c30127dc9c11a1f67abe80f6c77 189 Gene3D G3DSA:2.70.40.10 1 161 2.6E-53 T 17-10-2018 IPR036157 dUTPase-like superfamily BJD13_02935 13410c30127dc9c11a1f67abe80f6c77 189 Pfam PF00692 dUTPase 81 184 5.3E-7 T 17-10-2018 IPR029054 dUTPase-like BJD13_02935 13410c30127dc9c11a1f67abe80f6c77 189 SUPERFAMILY SSF51283 3 188 6.15E-54 T 17-10-2018 IPR036157 dUTPase-like superfamily BJD13_02935 13410c30127dc9c11a1f67abe80f6c77 189 Hamap MF_00146 dCTP deaminase [dcd]. 1 189 28.445 T 17-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 BJD13_02935 13410c30127dc9c11a1f67abe80f6c77 189 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 5 188 2.8E-48 T 17-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 BJD13_14310 a45ce43939e3e83ad9ef5c9764f24da6 205 Gene3D G3DSA:1.20.120.1760 9 197 1.8E-21 T 17-10-2018 BJD13_14310 a45ce43939e3e83ad9ef5c9764f24da6 205 Pfam PF01066 CDP-alcohol phosphatidyltransferase 28 97 6.4E-10 T 17-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 BJD13_23620 e22872717956f5c57ffd46737a382e92 459 Pfam PF00144 Beta-lactamase 80 405 1.3E-65 T 17-10-2018 IPR001466 Beta-lactamase-related BJD13_23620 e22872717956f5c57ffd46737a382e92 459 SUPERFAMILY SSF56601 74 424 3.38E-75 T 17-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BJD13_23620 e22872717956f5c57ffd46737a382e92 459 Gene3D G3DSA:3.40.710.10 75 413 2.4E-78 T 17-10-2018 BJD13_23335 ca77b8c921996c2fd5ed5b0dd6ae7712 480 SUPERFAMILY SSF48452 137 316 8.86E-7 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_23335 ca77b8c921996c2fd5ed5b0dd6ae7712 480 Gene3D G3DSA:1.25.40.10 24 322 7.2E-7 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_20170 9069c689da91fc2917c754bbf89ae79d 282 Pfam PF03421 YopJ Serine/Threonine acetyltransferase 1 168 2.2E-44 T 17-10-2018 IPR005083 Serine/Threonine acetyltransferase, YopJ BJD13_15860 c3329ed9943fc8e10ee80467ae373066 336 Gene3D G3DSA:3.40.50.720 1 330 1.4E-75 T 17-10-2018 BJD13_15860 c3329ed9943fc8e10ee80467ae373066 336 Pfam PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family 4 251 7.3E-49 T 17-10-2018 IPR002225 3-beta hydroxysteroid dehydrogenase/isomerase GO:0003854|GO:0006694|GO:0016616|GO:0055114 BJD13_15860 c3329ed9943fc8e10ee80467ae373066 336 SUPERFAMILY SSF51735 1 325 2.81E-67 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_01580 357453a827c714a6b78f8fe53ba27e82 134 Pfam PF03994 Domain of Unknown Function (DUF350) 80 132 5.7E-10 T 17-10-2018 IPR007140 Protein of unknown function DUF350 BJD13_01580 357453a827c714a6b78f8fe53ba27e82 134 Pfam PF03994 Domain of Unknown Function (DUF350) 15 68 1.2E-13 T 17-10-2018 IPR007140 Protein of unknown function DUF350 BJD13_06615 cc016989708e43e5fc3de35dcf9d2858 135 Pfam PF04347 Flagellar biosynthesis protein, FliO 47 131 1.4E-24 T 17-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 BJD13_06615 cc016989708e43e5fc3de35dcf9d2858 135 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 35 102 4.2E-23 T 17-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 BJD13_03445 1335f0d331eade9d1fad167556c23289 270 SUPERFAMILY SSF47090 51 121 1.1E-17 T 17-10-2018 IPR036365 PGBD-like superfamily BJD13_03445 1335f0d331eade9d1fad167556c23289 270 Pfam PF01471 Putative peptidoglycan binding domain 58 119 7.4E-14 T 17-10-2018 IPR002477 Peptidoglycan binding-like BJD13_03445 1335f0d331eade9d1fad167556c23289 270 Gene3D G3DSA:1.10.101.10 44 129 4.7E-20 T 17-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 BJD13_12120 f31774b659b50ecf49ebcb672d5c1863 114 Pfam PF09842 Predicted membrane protein (DUF2069) 12 94 6.1E-8 T 17-10-2018 IPR018643 Protein of unknown function DUF2069, membrane BJD13_01130 09b88b802b44544d3ba02226a26d2826 403 Gene3D G3DSA:3.30.420.10 172 388 1.3E-31 T 17-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BJD13_01130 09b88b802b44544d3ba02226a26d2826 403 Pfam PF00665 Integrase core domain 174 312 8.4E-25 T 17-10-2018 IPR001584 Integrase, catalytic core GO:0015074 BJD13_01130 09b88b802b44544d3ba02226a26d2826 403 Pfam PF13518 Helix-turn-helix domain 27 84 3.1E-10 T 17-10-2018 BJD13_01130 09b88b802b44544d3ba02226a26d2826 403 SUPERFAMILY SSF53098 171 368 5.61E-22 T 17-10-2018 IPR012337 Ribonuclease H-like superfamily BJD13_15875 87613810627b9db6a75986b8944a7334 300 Pfam PF00561 alpha/beta hydrolase fold 33 282 3.8E-24 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD13_15875 87613810627b9db6a75986b8944a7334 300 Gene3D G3DSA:3.40.50.1820 2 297 1.3E-64 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_15875 87613810627b9db6a75986b8944a7334 300 SUPERFAMILY SSF53474 4 297 5.14E-62 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_15875 87613810627b9db6a75986b8944a7334 300 PRINTS PR00412 Epoxide hydrolase signature 110 123 2.2E-5 T 17-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 BJD13_15875 87613810627b9db6a75986b8944a7334 300 PRINTS PR00412 Epoxide hydrolase signature 272 294 2.2E-5 T 17-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 BJD13_15875 87613810627b9db6a75986b8944a7334 300 PRINTS PR00412 Epoxide hydrolase signature 38 56 2.2E-5 T 17-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 BJD13_04045 e74bf13d0bec27eea0ce68a19638192a 328 Pfam PF00072 Response regulator receiver domain 7 116 4.7E-23 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_04045 e74bf13d0bec27eea0ce68a19638192a 328 Pfam PF13487 HD domain 202 264 9.6E-18 T 17-10-2018 BJD13_04045 e74bf13d0bec27eea0ce68a19638192a 328 SMART SM00448 4 116 3.6E-33 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_04045 e74bf13d0bec27eea0ce68a19638192a 328 SUPERFAMILY SSF109604 139 314 4.4E-35 T 17-10-2018 BJD13_04045 e74bf13d0bec27eea0ce68a19638192a 328 SMART SM00471 146 283 3.8E-7 T 17-10-2018 IPR003607 HD/PDEase domain BJD13_04045 e74bf13d0bec27eea0ce68a19638192a 328 Gene3D G3DSA:1.10.3210.10 130 325 4.3E-64 T 17-10-2018 BJD13_04045 e74bf13d0bec27eea0ce68a19638192a 328 SUPERFAMILY SSF52172 3 131 1.71E-33 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_04045 e74bf13d0bec27eea0ce68a19638192a 328 Gene3D G3DSA:3.40.50.2300 4 129 8.8E-31 T 17-10-2018 BJD13_03260 8d5c7610efa88cf9d1822d85f8eba255 381 SUPERFAMILY SSF56059 98 299 2.65E-63 T 17-10-2018 BJD13_03260 8d5c7610efa88cf9d1822d85f8eba255 381 Gene3D G3DSA:3.30.470.20 181 370 1.4E-69 T 17-10-2018 BJD13_03260 8d5c7610efa88cf9d1822d85f8eba255 381 Gene3D G3DSA:3.30.1490.20 103 180 3.9E-28 T 17-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BJD13_03260 8d5c7610efa88cf9d1822d85f8eba255 381 SUPERFAMILY SSF52440 3 95 6.47E-22 T 17-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BJD13_03260 8d5c7610efa88cf9d1822d85f8eba255 381 Pfam PF02222 ATP-grasp domain 107 279 9.5E-59 T 17-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type BJD13_03260 8d5c7610efa88cf9d1822d85f8eba255 381 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 3 352 4.2E-116 T 17-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 BJD13_03260 8d5c7610efa88cf9d1822d85f8eba255 381 Gene3D G3DSA:3.40.50.20 1 102 1.6E-33 T 17-10-2018 BJD13_03260 8d5c7610efa88cf9d1822d85f8eba255 381 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 3 351 41.881 T 17-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 BJD13_03260 8d5c7610efa88cf9d1822d85f8eba255 381 SUPERFAMILY SSF51246 304 370 1.26E-14 T 17-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 BJD13_16895 5a29d5ff1b3a28880596a1e4d90474af 233 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 134 221 7.6E-7 T 17-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 BJD13_21860 2db7563b239f16b85b90d3ae0033f93b 479 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 2 473 61.636 T 17-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 BJD13_21860 2db7563b239f16b85b90d3ae0033f93b 479 ProSitePatterns PS01244 Aconitase family signature 2. 406 419 - T 17-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 BJD13_21860 2db7563b239f16b85b90d3ae0033f93b 479 Pfam PF00330 Aconitase family (aconitate hydratase) 8 464 1.9E-157 T 17-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BJD13_21860 2db7563b239f16b85b90d3ae0033f93b 479 Gene3D G3DSA:3.30.499.10 334 479 3.6E-48 T 17-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 BJD13_21860 2db7563b239f16b85b90d3ae0033f93b 479 Gene3D G3DSA:3.30.499.20 5 292 1.0E-96 T 17-10-2018 BJD13_21860 2db7563b239f16b85b90d3ae0033f93b 479 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 3 472 1.6E-233 T 17-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 BJD13_21860 2db7563b239f16b85b90d3ae0033f93b 479 PRINTS PR00415 Aconitase family signature 88 101 1.5E-47 T 17-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BJD13_21860 2db7563b239f16b85b90d3ae0033f93b 479 PRINTS PR00415 Aconitase family signature 114 122 1.5E-47 T 17-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BJD13_21860 2db7563b239f16b85b90d3ae0033f93b 479 PRINTS PR00415 Aconitase family signature 201 214 1.5E-47 T 17-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BJD13_21860 2db7563b239f16b85b90d3ae0033f93b 479 PRINTS PR00415 Aconitase family signature 125 138 1.5E-47 T 17-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BJD13_21860 2db7563b239f16b85b90d3ae0033f93b 479 PRINTS PR00415 Aconitase family signature 215 228 1.5E-47 T 17-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BJD13_21860 2db7563b239f16b85b90d3ae0033f93b 479 PRINTS PR00415 Aconitase family signature 292 306 1.5E-47 T 17-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BJD13_21860 2db7563b239f16b85b90d3ae0033f93b 479 PRINTS PR00415 Aconitase family signature 139 154 1.5E-47 T 17-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BJD13_21860 2db7563b239f16b85b90d3ae0033f93b 479 PRINTS PR00415 Aconitase family signature 349 360 1.5E-47 T 17-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BJD13_21860 2db7563b239f16b85b90d3ae0033f93b 479 PRINTS PR00415 Aconitase family signature 406 419 1.5E-47 T 17-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BJD13_21860 2db7563b239f16b85b90d3ae0033f93b 479 ProSitePatterns PS00450 Aconitase family signature 1. 345 361 - T 17-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 BJD13_21860 2db7563b239f16b85b90d3ae0033f93b 479 SUPERFAMILY SSF53732 3 474 1.11E-161 T 17-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 BJD13_22715 4aa7539b3b8b5b856e9b9ad7b9f7d385 278 Gene3D G3DSA:3.40.50.150 43 231 5.5E-33 T 17-10-2018 BJD13_22715 4aa7539b3b8b5b856e9b9ad7b9f7d385 278 Pfam PF13489 Methyltransferase domain 45 187 5.4E-19 T 17-10-2018 BJD13_22715 4aa7539b3b8b5b856e9b9ad7b9f7d385 278 SUPERFAMILY SSF53335 43 204 1.23E-30 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_23710 4b5f1358722be7acc8846091b1232b1c 362 Pfam PF00742 Homoserine dehydrogenase 162 357 2.4E-44 T 17-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 BJD13_23710 4b5f1358722be7acc8846091b1232b1c 362 SUPERFAMILY SSF55347 162 344 6.15E-41 T 17-10-2018 BJD13_23710 4b5f1358722be7acc8846091b1232b1c 362 PIRSF PIRSF036497 17 362 8.3E-93 T 17-10-2018 IPR022697 Homoserine dehydrogenase lacking ACT domain GO:0004412 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 BJD13_23710 4b5f1358722be7acc8846091b1232b1c 362 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 208 230 - T 17-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 BJD13_23710 4b5f1358722be7acc8846091b1232b1c 362 Gene3D G3DSA:3.40.50.720 22 359 1.5E-93 T 17-10-2018 BJD13_23710 4b5f1358722be7acc8846091b1232b1c 362 Gene3D G3DSA:3.30.360.10 173 342 1.5E-93 T 17-10-2018 BJD13_23710 4b5f1358722be7acc8846091b1232b1c 362 SUPERFAMILY SSF51735 21 184 1.9E-23 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_23710 4b5f1358722be7acc8846091b1232b1c 362 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 26 150 1.2E-9 T 17-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 BJD13_19115 7df8d8bf3976a867d9aa2e10b5bad2fd 180 Pfam PF01292 Prokaryotic cytochrome b561 7 175 2.2E-28 T 17-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 BJD13_19115 7df8d8bf3976a867d9aa2e10b5bad2fd 180 SUPERFAMILY SSF81342 2 178 3.14E-34 T 17-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 BJD13_09560 454097e6d4956b79cb2c62f77f180c96 200 Gene3D G3DSA:3.40.50.150 1 183 1.6E-12 T 17-10-2018 BJD13_09560 454097e6d4956b79cb2c62f77f180c96 200 Pfam PF13489 Methyltransferase domain 29 147 6.9E-7 T 17-10-2018 BJD13_09560 454097e6d4956b79cb2c62f77f180c96 200 SUPERFAMILY SSF53335 6 184 7.88E-16 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_18100 84a6166d4725a6805c4e64719cd27d31 196 SUPERFAMILY SSF52833 42 184 2.15E-20 T 17-10-2018 IPR036249 Thioredoxin-like superfamily BJD13_18100 84a6166d4725a6805c4e64719cd27d31 196 Pfam PF00578 AhpC/TSA family 49 163 1.5E-5 T 17-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 BJD13_18100 84a6166d4725a6805c4e64719cd27d31 196 Gene3D G3DSA:3.40.30.10 46 190 1.6E-16 T 17-10-2018 BJD13_18100 84a6166d4725a6805c4e64719cd27d31 196 ProSitePatterns PS00194 Thioredoxin family active site. 73 91 - T 17-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 BJD13_24170 49eab44135abdd6d881b08783cf22bf1 379 Gene3D G3DSA:2.70.70.10 13 174 4.2E-27 T 17-10-2018 IPR011055 Duplicated hybrid motif BJD13_24170 49eab44135abdd6d881b08783cf22bf1 379 Pfam PF01551 Peptidase family M23 51 145 4.7E-19 T 17-10-2018 IPR016047 Peptidase M23 BJD13_24170 49eab44135abdd6d881b08783cf22bf1 379 SUPERFAMILY SSF51261 35 131 3.66E-26 T 17-10-2018 IPR011055 Duplicated hybrid motif BJD13_20175 3b2f17cdc773408553252eb896198b73 149 Pfam PF05069 Phage virion morphogenesis family 3 147 1.5E-38 T 17-10-2018 IPR006522 Phage virion morphogensis protein BJD13_20175 3b2f17cdc773408553252eb896198b73 149 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 3 147 4.1E-33 T 17-10-2018 IPR006522 Phage virion morphogensis protein BJD13_06500 5f0623be84636d1c19baaa2a683a007e 127 SMART SM00448 4 117 3.5E-20 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_06500 5f0623be84636d1c19baaa2a683a007e 127 SUPERFAMILY SSF52172 1 121 1.99E-27 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_06500 5f0623be84636d1c19baaa2a683a007e 127 Pfam PF00072 Response regulator receiver domain 6 114 4.1E-22 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_06500 5f0623be84636d1c19baaa2a683a007e 127 Gene3D G3DSA:3.40.50.2300 1 126 1.2E-27 T 17-10-2018 BJD13_20130 9dff04eb45055c816102d145ce51f79a 388 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 108 272 1.3E-23 T 17-10-2018 IPR035089 Tail sheath protein, subtilisin-like domain BJD13_20130 9dff04eb45055c816102d145ce51f79a 388 Pfam PF17482 Phage tail sheath C-terminal domain 274 371 5.9E-12 T 17-10-2018 IPR020287 Tail sheath protein, C-terminal domain BJD13_04650 f5ce843d300a62e748e563b68a885a4a 150 Pfam PF13508 Acetyltransferase (GNAT) domain 58 126 1.0E-9 T 17-10-2018 IPR000182 GNAT domain BJD13_04650 f5ce843d300a62e748e563b68a885a4a 150 Gene3D G3DSA:3.40.630.30 4 136 1.1E-37 T 17-10-2018 BJD13_04650 f5ce843d300a62e748e563b68a885a4a 150 SUPERFAMILY SSF55729 17 126 2.62E-17 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD13_06715 77c677c46d95efa25678d4d36b1a3512 88 Pfam PF01527 Transposase 2 69 1.9E-9 T 17-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 BJD13_06715 77c677c46d95efa25678d4d36b1a3512 88 SUPERFAMILY SSF46689 1 69 4.12E-5 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_06065 566e662f3556b9b784de7e45dde11b3e 306 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 79 178 2.6E-8 T 17-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 BJD13_06065 566e662f3556b9b784de7e45dde11b3e 306 SUPERFAMILY SSF53187 33 290 4.96E-37 T 17-10-2018 BJD13_06065 566e662f3556b9b784de7e45dde11b3e 306 Gene3D G3DSA:3.40.630.10 4 306 8.7E-116 T 17-10-2018 BJD13_04030 42d63d69a410e0fead499f6657733df8 219 SUPERFAMILY SSF48498 79 202 2.35E-13 T 17-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BJD13_04030 42d63d69a410e0fead499f6657733df8 219 Pfam PF16859 Bacterial transcriptional repressor C-terminal 79 165 1.1E-7 T 17-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal BJD13_04030 42d63d69a410e0fead499f6657733df8 219 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 62 1.3E-9 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD13_04030 42d63d69a410e0fead499f6657733df8 219 Gene3D G3DSA:1.10.357.10 71 205 6.4E-27 T 17-10-2018 BJD13_04030 42d63d69a410e0fead499f6657733df8 219 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 5.3E-6 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD13_04030 42d63d69a410e0fead499f6657733df8 219 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 5.3E-6 T 17-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BJD13_04030 42d63d69a410e0fead499f6657733df8 219 SUPERFAMILY SSF46689 5 72 1.75E-13 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_04030 42d63d69a410e0fead499f6657733df8 219 Gene3D G3DSA:1.10.10.60 2 61 3.2E-13 T 17-10-2018 BJD13_11100 bc628670d7933a2d19bd142f7575a4f8 146 SUPERFAMILY SSF55785 39 133 1.92E-10 T 17-10-2018 IPR035965 PAS domain superfamily BJD13_11100 bc628670d7933a2d19bd142f7575a4f8 146 Gene3D G3DSA:3.30.450.20 36 142 2.5E-9 T 17-10-2018 BJD13_11100 bc628670d7933a2d19bd142f7575a4f8 146 Pfam PF08670 MEKHLA domain 10 142 6.7E-44 T 17-10-2018 IPR013978 MEKHLA BJD13_19295 45856ab5bf26e5b11d7ed46b513d709e 92 Pfam PF04380 Membrane fusogenic activity 2 78 7.8E-27 T 17-10-2018 IPR007475 Membrane fusogenic activity BJD13_01775 f81e74a879a2dedf89b84421892d3da2 105 SUPERFAMILY SSF69754 1 99 1.96E-30 T 17-10-2018 IPR036567 Ribosome hibernation promotion factor-like BJD13_01775 f81e74a879a2dedf89b84421892d3da2 105 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 92 4.5E-23 T 17-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 BJD13_01775 f81e74a879a2dedf89b84421892d3da2 105 Gene3D G3DSA:3.30.160.100 1 103 4.2E-29 T 17-10-2018 IPR036567 Ribosome hibernation promotion factor-like BJD13_01775 f81e74a879a2dedf89b84421892d3da2 105 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 97 1.3E-25 T 17-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 BJD13_21120 011b9defff879d6bfa69d2c0274b1c6b 72 Pfam PF04325 Protein of unknown function (DUF465) 20 66 1.2E-11 T 17-10-2018 IPR007420 Protein of unknown function DUF465 BJD13_21120 011b9defff879d6bfa69d2c0274b1c6b 72 Gene3D G3DSA:1.20.58.660 1 72 1.4E-9 T 17-10-2018 BJD13_08190 4a8917c8a0087b184e743f7ab18a97cd 130 Pfam PF00034 Cytochrome c 30 130 2.5E-8 T 17-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_08190 4a8917c8a0087b184e743f7ab18a97cd 130 PRINTS PR00604 Class IA and IB cytochrome C signature 52 67 7.2E-13 T 17-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_08190 4a8917c8a0087b184e743f7ab18a97cd 130 PRINTS PR00604 Class IA and IB cytochrome C signature 120 128 7.2E-13 T 17-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_08190 4a8917c8a0087b184e743f7ab18a97cd 130 PRINTS PR00604 Class IA and IB cytochrome C signature 40 47 7.2E-13 T 17-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_08190 4a8917c8a0087b184e743f7ab18a97cd 130 PRINTS PR00604 Class IA and IB cytochrome C signature 83 99 7.2E-13 T 17-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_08190 4a8917c8a0087b184e743f7ab18a97cd 130 PRINTS PR00604 Class IA and IB cytochrome C signature 103 113 7.2E-13 T 17-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_08190 4a8917c8a0087b184e743f7ab18a97cd 130 Gene3D G3DSA:1.10.760.10 18 128 4.9E-32 T 17-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BJD13_08190 4a8917c8a0087b184e743f7ab18a97cd 130 SUPERFAMILY SSF46626 28 130 1.13E-24 T 17-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BJD13_11755 66d9ed988c91bb16ca85738394f710f4 139 Pfam PF09900 Predicted membrane protein (DUF2127) 1 132 2.7E-35 T 17-10-2018 IPR021125 Protein of unknown function DUF2127 BJD13_12180 03cf917a716b59a8dc15bdd65799eca5 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 182 3.2E-23 T 17-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BJD13_12180 03cf917a716b59a8dc15bdd65799eca5 187 SUPERFAMILY SSF88946 23 95 1.33E-7 T 17-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BJD13_12180 03cf917a716b59a8dc15bdd65799eca5 187 Pfam PF04542 Sigma-70 region 2 30 89 2.9E-5 T 17-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BJD13_12180 03cf917a716b59a8dc15bdd65799eca5 187 Pfam PF08281 Sigma-70, region 4 127 179 1.9E-17 T 17-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BJD13_12180 03cf917a716b59a8dc15bdd65799eca5 187 Gene3D G3DSA:1.10.10.10 107 185 5.4E-20 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_12180 03cf917a716b59a8dc15bdd65799eca5 187 SUPERFAMILY SSF88659 120 184 4.11E-16 T 17-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BJD13_14555 57b0131899ba09a19ee588b9edca34e0 161 Pfam PF06127 Protein of unknown function (DUF962) 10 156 1.4E-25 T 17-10-2018 IPR009305 Protein of unknown function DUF962 BJD13_17060 f0d4cf1bd85307b67c2bc1c52da0f9a7 417 Gene3D G3DSA:3.20.20.140 31 410 2.9E-122 T 17-10-2018 BJD13_17060 f0d4cf1bd85307b67c2bc1c52da0f9a7 417 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 36 402 4.0E-102 T 17-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 BJD13_17060 f0d4cf1bd85307b67c2bc1c52da0f9a7 417 SUPERFAMILY SSF51556 30 406 3.97E-84 T 17-10-2018 IPR032466 Metal-dependent hydrolase BJD13_15635 b88a7f92e24a2187a215d4c233ceab50 220 Gene3D G3DSA:3.40.50.1820 1 220 2.6E-67 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_15635 b88a7f92e24a2187a215d4c233ceab50 220 Pfam PF12146 Serine aminopeptidase, S33 50 143 2.0E-6 T 17-10-2018 IPR022742 Serine aminopeptidase, S33 BJD13_15635 b88a7f92e24a2187a215d4c233ceab50 220 SUPERFAMILY SSF53474 12 216 3.08E-47 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_04165 79701aa71698f7a468b41b5a3a805b7c 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 296 2.6E-18 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD13_04165 79701aa71698f7a468b41b5a3a805b7c 303 Gene3D G3DSA:1.10.3720.10 12 299 9.5E-55 T 17-10-2018 IPR035906 MetI-like superfamily BJD13_04165 79701aa71698f7a468b41b5a3a805b7c 303 SUPERFAMILY SSF161098 13 294 5.79E-57 T 17-10-2018 IPR035906 MetI-like superfamily BJD13_16780 eb75980c372f3d4e718835c2e06b81dd 291 SUPERFAMILY SSF53850 88 284 2.02E-33 T 17-10-2018 BJD13_16780 eb75980c372f3d4e718835c2e06b81dd 291 Pfam PF03466 LysR substrate binding domain 88 278 2.1E-33 T 17-10-2018 IPR005119 LysR, substrate-binding BJD13_16780 eb75980c372f3d4e718835c2e06b81dd 291 SUPERFAMILY SSF46785 1 83 5.53E-17 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_16780 eb75980c372f3d4e718835c2e06b81dd 291 Gene3D G3DSA:3.40.190.290 90 282 4.4E-39 T 17-10-2018 BJD13_16780 eb75980c372f3d4e718835c2e06b81dd 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.2E-13 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_16780 eb75980c372f3d4e718835c2e06b81dd 291 Gene3D G3DSA:1.10.10.10 1 87 5.9E-18 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_18130 ff029375fabf27a3041916b2287ce13a 460 SUPERFAMILY SSF56935 100 460 2.05E-19 T 17-10-2018 BJD13_03765 ee9898a1734183c5544445e7c09dfa56 605 Pfam PF05960 Bacterial protein of unknown function (DUF885) 62 590 3.3E-163 T 17-10-2018 IPR010281 Protein of unknown function DUF885 BJD13_24020 626c0efd54a91065609fb5cc92a17d5a 103 Pfam PF04956 TrbC/VIRB2 family 10 100 1.2E-14 T 17-10-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 BJD13_01595 f73af670ae03b99773c07454a9a5998a 457 Gene3D G3DSA:1.20.1720.10 30 258 4.4E-29 T 17-10-2018 BJD13_01595 f73af670ae03b99773c07454a9a5998a 457 SUPERFAMILY SSF103473 25 456 2.75E-38 T 17-10-2018 IPR036259 MFS transporter superfamily BJD13_01595 f73af670ae03b99773c07454a9a5998a 457 Pfam PF07690 Major Facilitator Superfamily 37 412 9.3E-31 T 17-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD13_01595 f73af670ae03b99773c07454a9a5998a 457 Gene3D G3DSA:1.20.1250.20 275 456 2.2E-8 T 17-10-2018 BJD13_11620 2bf4fe269d5ef911dd3117148503cc3c 355 SUPERFAMILY SSF110997 104 165 6.28E-10 T 17-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 BJD13_11620 2bf4fe269d5ef911dd3117148503cc3c 355 SUPERFAMILY SSF110997 279 352 4.18E-16 T 17-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 BJD13_11620 2bf4fe269d5ef911dd3117148503cc3c 355 Gene3D G3DSA:3.30.70.1070 104 178 6.7E-7 T 17-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 BJD13_11620 2bf4fe269d5ef911dd3117148503cc3c 355 Gene3D G3DSA:3.30.70.1070 280 352 3.2E-11 T 17-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 BJD13_11620 2bf4fe269d5ef911dd3117148503cc3c 355 Pfam PF05036 Sporulation related domain 280 352 7.9E-17 T 17-10-2018 IPR007730 Sporulation-like domain GO:0042834 BJD13_11620 2bf4fe269d5ef911dd3117148503cc3c 355 Pfam PF05036 Sporulation related domain 102 179 4.8E-15 T 17-10-2018 IPR007730 Sporulation-like domain GO:0042834 BJD13_03940 8c80c7c384bc5c0c4258a547a1a29ba6 117 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 29 108 7.3E-27 T 17-10-2018 IPR003849 Preprotein translocase YajC BJD13_03940 8c80c7c384bc5c0c4258a547a1a29ba6 117 SMART SM01323 26 108 3.5E-44 T 17-10-2018 IPR003849 Preprotein translocase YajC BJD13_03940 8c80c7c384bc5c0c4258a547a1a29ba6 117 PRINTS PR01853 Bacterial YajC preprotein translocase signature 66 84 4.7E-13 T 17-10-2018 IPR003849 Preprotein translocase YajC BJD13_03940 8c80c7c384bc5c0c4258a547a1a29ba6 117 PRINTS PR01853 Bacterial YajC preprotein translocase signature 28 48 4.7E-13 T 17-10-2018 IPR003849 Preprotein translocase YajC BJD13_03940 8c80c7c384bc5c0c4258a547a1a29ba6 117 Pfam PF02699 Preprotein translocase subunit 31 104 2.3E-28 T 17-10-2018 IPR003849 Preprotein translocase YajC BJD13_00705 27a82e3ea67e8d5cd255f02344c34a16 1133 Pfam PF07916 TraG-like protein, N-terminal region 3 478 2.6E-58 T 17-10-2018 IPR012931 TraG-like, N-terminal BJD13_14015 c15c13fcd164618078cfcc2898dbc002 139 Gene3D G3DSA:3.30.750.24 4 123 3.0E-22 T 17-10-2018 IPR036513 STAS domain superfamily BJD13_14015 c15c13fcd164618078cfcc2898dbc002 139 Pfam PF01740 STAS domain 18 103 1.3E-12 T 17-10-2018 IPR002645 STAS domain BJD13_14015 c15c13fcd164618078cfcc2898dbc002 139 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 16 95 1.1E-15 T 17-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 BJD13_14015 c15c13fcd164618078cfcc2898dbc002 139 SUPERFAMILY SSF52091 13 110 2.75E-19 T 17-10-2018 IPR036513 STAS domain superfamily BJD13_20560 edfe1c209e6c13d939b3441d2fc3539e 433 SMART SM00387 312 408 8.4E-5 T 17-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BJD13_20560 edfe1c209e6c13d939b3441d2fc3539e 433 SUPERFAMILY SSF55874 275 406 8.51E-20 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_20560 edfe1c209e6c13d939b3441d2fc3539e 433 Gene3D G3DSA:3.30.565.10 273 406 5.0E-20 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_20560 edfe1c209e6c13d939b3441d2fc3539e 433 Pfam PF06580 Histidine kinase 218 297 3.1E-20 T 17-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 BJD13_18765 76054a58f0e9812aeabaaa7d44d4b77a 90 Gene3D G3DSA:1.20.58.1000 1 90 4.7E-26 T 17-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily BJD13_18765 76054a58f0e9812aeabaaa7d44d4b77a 90 Pfam PF02583 Metal-sensitive transcriptional repressor 7 86 6.5E-22 T 17-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 BJD13_08235 10b243e0872022ec9c4735159b71edaf 662 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 627 640 5.5E-53 T 17-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD13_08235 10b243e0872022ec9c4735159b71edaf 662 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 394 413 5.5E-53 T 17-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD13_08235 10b243e0872022ec9c4735159b71edaf 662 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 351 368 5.5E-53 T 17-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD13_08235 10b243e0872022ec9c4735159b71edaf 662 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 313 328 5.5E-53 T 17-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD13_08235 10b243e0872022ec9c4735159b71edaf 662 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 5.5E-53 T 17-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD13_08235 10b243e0872022ec9c4735159b71edaf 662 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 5.5E-53 T 17-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD13_08235 10b243e0872022ec9c4735159b71edaf 662 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 189 204 5.5E-53 T 17-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD13_08235 10b243e0872022ec9c4735159b71edaf 662 Pfam PF01578 Cytochrome C assembly protein 89 295 1.6E-51 T 17-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 BJD13_08235 10b243e0872022ec9c4735159b71edaf 662 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 310 329 9.0E-90 T 17-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD13_08235 10b243e0872022ec9c4735159b71edaf 662 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 210 236 9.0E-90 T 17-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD13_08235 10b243e0872022ec9c4735159b71edaf 662 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 274 294 9.0E-90 T 17-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD13_08235 10b243e0872022ec9c4735159b71edaf 662 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 294 310 9.0E-90 T 17-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD13_08235 10b243e0872022ec9c4735159b71edaf 662 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 9.0E-90 T 17-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD13_08235 10b243e0872022ec9c4735159b71edaf 662 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 159 181 9.0E-90 T 17-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD13_08235 10b243e0872022ec9c4735159b71edaf 662 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 9.0E-90 T 17-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD13_08235 10b243e0872022ec9c4735159b71edaf 662 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 244 264 9.0E-90 T 17-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD13_08235 10b243e0872022ec9c4735159b71edaf 662 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 636 2.1E-219 T 17-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD13_08235 10b243e0872022ec9c4735159b71edaf 662 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 315 634 1.8E-116 T 17-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal BJD13_05090 0fbfc60d5f91e17de7fd5bff8ec50a47 654 Gene3D G3DSA:3.20.20.140 99 530 1.7E-91 T 17-10-2018 BJD13_05090 0fbfc60d5f91e17de7fd5bff8ec50a47 654 Gene3D G3DSA:3.10.310.70 118 229 1.7E-91 T 17-10-2018 BJD13_05090 0fbfc60d5f91e17de7fd5bff8ec50a47 654 Pfam PF07969 Amidohydrolase family 87 571 8.4E-123 T 17-10-2018 IPR013108 Amidohydrolase 3 BJD13_05090 0fbfc60d5f91e17de7fd5bff8ec50a47 654 SUPERFAMILY SSF51556 98 531 8.75E-48 T 17-10-2018 IPR032466 Metal-dependent hydrolase BJD13_05090 0fbfc60d5f91e17de7fd5bff8ec50a47 654 Gene3D G3DSA:2.30.40.10 47 546 1.7E-91 T 17-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BJD13_05090 0fbfc60d5f91e17de7fd5bff8ec50a47 654 SUPERFAMILY SSF51338 34 576 1.5E-26 T 17-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BJD13_03135 250f9099aff35e8d33ffc332e378ad2e 184 SUPERFAMILY SSF56770 35 179 8.11E-66 T 17-10-2018 BJD13_03135 250f9099aff35e8d33ffc332e378ad2e 184 Gene3D G3DSA:3.40.50.12280 22 184 6.6E-78 T 17-10-2018 BJD13_03135 250f9099aff35e8d33ffc332e378ad2e 184 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 63 172 5.0E-23 T 17-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_03135 250f9099aff35e8d33ffc332e378ad2e 184 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 144 160 - T 17-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_03135 250f9099aff35e8d33ffc332e378ad2e 184 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 38 177 2.2E-76 T 17-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_03135 250f9099aff35e8d33ffc332e378ad2e 184 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 27 177 41.238 T 17-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_14865 59aa45226c2d7235c5f0b5af3b564733 442 SUPERFAMILY SSF52540 97 365 5.51E-96 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_14865 59aa45226c2d7235c5f0b5af3b564733 442 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 350 359 - T 17-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BJD13_14865 59aa45226c2d7235c5f0b5af3b564733 442 Gene3D G3DSA:3.40.50.12240 17 442 5.6E-150 T 17-10-2018 BJD13_14865 59aa45226c2d7235c5f0b5af3b564733 442 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 150 359 3.8E-71 T 17-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BJD13_14865 59aa45226c2d7235c5f0b5af3b564733 442 TIGRFAM TIGR02546 III_secr_ATP: type III secretion apparatus H+-transporting two-sector ATPase 23 439 8.4E-192 T 17-10-2018 IPR013380 ATPase, type III secretion system, H+-transporting GO:0005524|GO:0005737|GO:0006754|GO:0030254|GO:0030257|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BJD13_14865 59aa45226c2d7235c5f0b5af3b564733 442 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 93 3.6E-8 T 17-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BJD13_14865 59aa45226c2d7235c5f0b5af3b564733 442 SMART SM00382 162 344 4.0E-7 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_14865 59aa45226c2d7235c5f0b5af3b564733 442 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 12 439 3.6E-170 T 17-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BJD13_23720 4e1d2fe183e8a04e63c06829df64586f 335 SUPERFAMILY SSF53474 34 333 2.41E-61 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_23720 4e1d2fe183e8a04e63c06829df64586f 335 Gene3D G3DSA:3.40.50.1820 23 334 3.0E-97 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_23720 4e1d2fe183e8a04e63c06829df64586f 335 PRINTS PR00111 Alpha/beta hydrolase fold signature 140 153 4.1E-11 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD13_23720 4e1d2fe183e8a04e63c06829df64586f 335 PRINTS PR00111 Alpha/beta hydrolase fold signature 95 110 4.1E-11 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD13_23720 4e1d2fe183e8a04e63c06829df64586f 335 PRINTS PR00111 Alpha/beta hydrolase fold signature 154 167 4.1E-11 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD13_23720 4e1d2fe183e8a04e63c06829df64586f 335 Pfam PF00561 alpha/beta hydrolase fold 72 193 1.5E-21 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD13_23720 4e1d2fe183e8a04e63c06829df64586f 335 PRINTS PR00412 Epoxide hydrolase signature 75 93 5.1E-5 T 17-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 BJD13_23720 4e1d2fe183e8a04e63c06829df64586f 335 PRINTS PR00412 Epoxide hydrolase signature 140 153 5.1E-5 T 17-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 BJD13_23720 4e1d2fe183e8a04e63c06829df64586f 335 PRINTS PR00412 Epoxide hydrolase signature 310 332 5.1E-5 T 17-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 BJD13_23720 4e1d2fe183e8a04e63c06829df64586f 335 PRINTS PR00412 Epoxide hydrolase signature 154 167 5.1E-5 T 17-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 BJD13_23720 4e1d2fe183e8a04e63c06829df64586f 335 PRINTS PR00412 Epoxide hydrolase signature 95 110 5.1E-5 T 17-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 BJD13_13130 31667e0d98fcf9cc8db5bcb3a84531a4 410 SUPERFAMILY SSF81891 121 403 6.54E-53 T 17-10-2018 BJD13_13130 31667e0d98fcf9cc8db5bcb3a84531a4 410 Gene3D G3DSA:3.30.460.10 1 122 4.8E-29 T 17-10-2018 BJD13_13130 31667e0d98fcf9cc8db5bcb3a84531a4 410 SUPERFAMILY SSF81301 1 120 1.2E-28 T 17-10-2018 BJD13_13130 31667e0d98fcf9cc8db5bcb3a84531a4 410 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 409 51.915 T 17-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 BJD13_13130 31667e0d98fcf9cc8db5bcb3a84531a4 410 Pfam PF01743 Poly A polymerase head domain 3 123 8.5E-19 T 17-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 BJD13_13130 31667e0d98fcf9cc8db5bcb3a84531a4 410 Pfam PF01966 HD domain 231 333 5.9E-6 T 17-10-2018 IPR006674 HD domain BJD13_13130 31667e0d98fcf9cc8db5bcb3a84531a4 410 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 150 213 2.1E-12 T 17-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 BJD13_13130 31667e0d98fcf9cc8db5bcb3a84531a4 410 Gene3D G3DSA:1.10.3090.10 123 407 7.9E-44 T 17-10-2018 BJD13_13130 31667e0d98fcf9cc8db5bcb3a84531a4 410 PIRSF PIRSF000813 1 409 2.4E-194 T 17-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 BJD13_03375 d155c520dfa17c47d66acc1bd63e5ed9 255 Gene3D G3DSA:2.60.40.2500 150 255 5.6E-48 T 17-10-2018 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily BJD13_03375 d155c520dfa17c47d66acc1bd63e5ed9 255 Pfam PF03524 Conjugal transfer protein 29 251 1.3E-52 T 17-10-2018 IPR010258 Conjugal transfer, TrbG/VirB9/CagX BJD13_12345 963a8ac89a62fc47150fa96c114188a5 186 SUPERFAMILY SSF53927 5 180 3.72E-33 T 17-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 BJD13_12345 963a8ac89a62fc47150fa96c114188a5 186 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 28 130 3.0E-12 T 17-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain BJD13_12345 963a8ac89a62fc47150fa96c114188a5 186 Gene3D G3DSA:3.40.140.10 10 179 1.4E-36 T 17-10-2018 BJD13_14125 ba76d5546f49c1a9298607b7f5b35945 183 Hamap MF_02088 Probable queuosine precursor transporter. 14 182 13.309 T 17-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 BJD13_14125 ba76d5546f49c1a9298607b7f5b35945 183 Pfam PF02592 Putative vitamin uptake transporter 85 173 2.3E-17 T 17-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 BJD13_14125 ba76d5546f49c1a9298607b7f5b35945 183 Pfam PF02592 Putative vitamin uptake transporter 44 86 1.2E-8 T 17-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 BJD13_06095 c8ba729a33d58d4d64357d2cfc8361b2 120 SUPERFAMILY SSF50022 6 114 7.2E-34 T 17-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 BJD13_06095 c8ba729a33d58d4d64357d2cfc8361b2 120 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 7 105 7.9E-26 T 17-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 BJD13_06095 c8ba729a33d58d4d64357d2cfc8361b2 120 Pfam PF13806 Rieske-like [2Fe-2S] domain 7 104 6.7E-16 T 17-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 BJD13_06095 c8ba729a33d58d4d64357d2cfc8361b2 120 Gene3D G3DSA:2.102.10.10 4 111 3.2E-29 T 17-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 BJD13_09370 a034ab31c3a24a68423498e87c122406 218 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 1 217 2.7E-82 T 17-10-2018 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 BJD13_09370 a034ab31c3a24a68423498e87c122406 218 Hamap MF_00812 Thiopurine S-methyltransferase [tpm]. 1 217 38.272 T 17-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 BJD13_09370 a034ab31c3a24a68423498e87c122406 218 TIGRFAM TIGR03840 TMPT_Se_Te: thiopurine S-methyltransferase, Se/Te detoxification family 4 216 5.3E-82 T 17-10-2018 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification GO:0008119|GO:0010038|GO:0032259 KEGG: 00983+2.1.1.67 BJD13_09370 a034ab31c3a24a68423498e87c122406 218 Gene3D G3DSA:3.40.50.150 16 218 6.7E-64 T 17-10-2018 BJD13_09370 a034ab31c3a24a68423498e87c122406 218 PIRSF PIRSF023956 1 218 9.6E-73 T 17-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 BJD13_09370 a034ab31c3a24a68423498e87c122406 218 SUPERFAMILY SSF53335 18 217 3.39E-52 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_18440 b840de4c629dd318f45766373bbd56d6 296 SUPERFAMILY SSF51430 11 289 4.98E-66 T 17-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BJD13_18440 b840de4c629dd318f45766373bbd56d6 296 PRINTS PR00069 Aldo-keto reductase signature 52 76 6.0E-12 T 17-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BJD13_18440 b840de4c629dd318f45766373bbd56d6 296 PRINTS PR00069 Aldo-keto reductase signature 117 135 6.0E-12 T 17-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BJD13_18440 b840de4c629dd318f45766373bbd56d6 296 PRINTS PR00069 Aldo-keto reductase signature 152 169 6.0E-12 T 17-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BJD13_18440 b840de4c629dd318f45766373bbd56d6 296 PRINTS PR00069 Aldo-keto reductase signature 222 246 6.0E-12 T 17-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BJD13_18440 b840de4c629dd318f45766373bbd56d6 296 Gene3D G3DSA:3.20.20.100 10 296 4.6E-66 T 17-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BJD13_18440 b840de4c629dd318f45766373bbd56d6 296 Pfam PF00248 Aldo/keto reductase family 22 289 1.5E-50 T 17-10-2018 IPR023210 NADP-dependent oxidoreductase domain BJD13_00900 db7192387847f77b454368cddb69f626 702 Pfam PF13307 Helicase C-terminal domain 541 696 1.7E-30 T 17-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 BJD13_00900 db7192387847f77b454368cddb69f626 702 SUPERFAMILY SSF52540 24 677 5.86E-14 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_00900 db7192387847f77b454368cddb69f626 702 SMART SM00491 550 683 5.1E-23 T 17-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 BJD13_00900 db7192387847f77b454368cddb69f626 702 Gene3D G3DSA:3.40.50.300 511 695 2.7E-26 T 17-10-2018 BJD13_00900 db7192387847f77b454368cddb69f626 702 Gene3D G3DSA:3.40.50.300 32 310 1.7E-32 T 17-10-2018 BJD13_00900 db7192387847f77b454368cddb69f626 702 Pfam PF06733 DEAD_2 212 280 4.6E-5 T 17-10-2018 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 BJD13_16450 474914781f59b41a31ee613471653d43 131 Pfam PF05610 Protein of unknown function (DUF779) 23 116 2.3E-48 T 17-10-2018 IPR008497 Protein of unknown function DUF779 BJD13_16450 474914781f59b41a31ee613471653d43 131 PIRSF PIRSF009151 1 131 9.4E-67 T 17-10-2018 IPR008497 Protein of unknown function DUF779 BJD13_08080 a0c2d468956f773160e59e384baa5528 471 ProSitePatterns PS00217 Sugar transport proteins signature 2. 138 163 - T 17-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 BJD13_08080 a0c2d468956f773160e59e384baa5528 471 ProSitePatterns PS00216 Sugar transport proteins signature 1. 96 112 - T 17-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 BJD13_08080 a0c2d468956f773160e59e384baa5528 471 Gene3D G3DSA:1.20.1250.20 26 471 8.0E-61 T 17-10-2018 BJD13_08080 a0c2d468956f773160e59e384baa5528 471 SUPERFAMILY SSF103473 14 469 5.75E-57 T 17-10-2018 IPR036259 MFS transporter superfamily BJD13_08080 a0c2d468956f773160e59e384baa5528 471 Pfam PF00083 Sugar (and other) transporter 39 469 2.4E-28 T 17-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 BJD13_03590 72e896625cfe00e520adc3fbf982c370 496 Pfam PF13440 Polysaccharide biosynthesis protein 42 334 1.8E-79 T 17-10-2018 BJD13_23440 9eea86fb4c19fe886017aa5ba9ad52f6 207 Pfam PF13302 Acetyltransferase (GNAT) domain 69 157 1.1E-14 T 17-10-2018 IPR000182 GNAT domain BJD13_23440 9eea86fb4c19fe886017aa5ba9ad52f6 207 SUPERFAMILY SSF55729 12 181 1.83E-36 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD13_23440 9eea86fb4c19fe886017aa5ba9ad52f6 207 Gene3D G3DSA:3.40.630.30 11 184 3.2E-37 T 17-10-2018 BJD13_03900 68f6c693a55d4a2cf58c73a2b2463bc6 373 Gene3D G3DSA:2.120.10.30 44 372 4.2E-17 T 17-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like BJD13_03900 68f6c693a55d4a2cf58c73a2b2463bc6 373 Pfam PF02333 Phytase 230 338 5.9E-6 T 17-10-2018 IPR003431 Beta propeller phytase GO:0016158 KEGG: 00562+3.1.3.8|MetaCyc: PWY-4702 BJD13_03900 68f6c693a55d4a2cf58c73a2b2463bc6 373 SUPERFAMILY SSF50956 58 368 9.42E-37 T 17-10-2018 BJD13_12640 ab9f01356214f92f5b0bc1be7569edc2 366 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 182 6.4E-27 T 17-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase BJD13_13220 fa7c041af0392922434c2a6b8abd0a2f 692 PRINTS PR00811 Bacterial general secretion pathway protein D signature 455 479 7.5E-35 T 17-10-2018 IPR001775 GspD/PilQ family BJD13_13220 fa7c041af0392922434c2a6b8abd0a2f 692 PRINTS PR00811 Bacterial general secretion pathway protein D signature 587 605 7.5E-35 T 17-10-2018 IPR001775 GspD/PilQ family BJD13_13220 fa7c041af0392922434c2a6b8abd0a2f 692 PRINTS PR00811 Bacterial general secretion pathway protein D signature 610 624 7.5E-35 T 17-10-2018 IPR001775 GspD/PilQ family BJD13_13220 fa7c041af0392922434c2a6b8abd0a2f 692 PRINTS PR00811 Bacterial general secretion pathway protein D signature 490 500 7.5E-35 T 17-10-2018 IPR001775 GspD/PilQ family BJD13_13220 fa7c041af0392922434c2a6b8abd0a2f 692 PRINTS PR00811 Bacterial general secretion pathway protein D signature 357 367 7.5E-35 T 17-10-2018 IPR001775 GspD/PilQ family BJD13_13220 fa7c041af0392922434c2a6b8abd0a2f 692 Pfam PF03958 Bacterial type II/III secretion system short domain 259 357 2.9E-16 T 17-10-2018 IPR005644 NolW-like BJD13_13220 fa7c041af0392922434c2a6b8abd0a2f 692 Pfam PF03958 Bacterial type II/III secretion system short domain 126 186 1.0E-10 T 17-10-2018 IPR005644 NolW-like BJD13_13220 fa7c041af0392922434c2a6b8abd0a2f 692 Pfam PF03958 Bacterial type II/III secretion system short domain 190 252 3.1E-10 T 17-10-2018 IPR005644 NolW-like BJD13_13220 fa7c041af0392922434c2a6b8abd0a2f 692 Gene3D G3DSA:3.30.1370.120 256 355 1.6E-13 T 17-10-2018 IPR038591 NolW-like superfamily BJD13_13220 fa7c041af0392922434c2a6b8abd0a2f 692 Gene3D G3DSA:3.30.1370.120 184 252 2.5E-9 T 17-10-2018 IPR038591 NolW-like superfamily BJD13_13220 fa7c041af0392922434c2a6b8abd0a2f 692 Gene3D G3DSA:3.30.1370.120 33 183 3.8E-39 T 17-10-2018 IPR038591 NolW-like superfamily BJD13_13220 fa7c041af0392922434c2a6b8abd0a2f 692 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 36 632 8.9E-170 T 17-10-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 BJD13_13220 fa7c041af0392922434c2a6b8abd0a2f 692 Pfam PF00263 Bacterial type II and III secretion system protein 459 623 1.5E-49 T 17-10-2018 IPR004846 Type II/III secretion system GO:0009306 BJD13_07055 0f877325a03005b83823c927cc9572ab 239 Pfam PF03473 MOSC domain 59 172 1.0E-26 T 17-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 BJD13_07055 0f877325a03005b83823c927cc9572ab 239 SUPERFAMILY SSF50800 12 236 1.36E-74 T 17-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily BJD13_07055 0f877325a03005b83823c927cc9572ab 239 Gene3D G3DSA:2.40.33.20 10 239 1.6E-81 T 17-10-2018 BJD13_07055 0f877325a03005b83823c927cc9572ab 239 Pfam PF03475 3-alpha domain 183 223 6.0E-10 T 17-10-2018 IPR005163 3-alpha domain BJD13_16630 2a9386f0a5fb9906a54cd3a12ee0df25 62 SUPERFAMILY SSF69047 1 60 1.1E-16 T 17-10-2018 IPR036629 YjbJ superfamily BJD13_16630 2a9386f0a5fb9906a54cd3a12ee0df25 62 Gene3D G3DSA:1.10.1470.10 1 62 5.6E-14 T 17-10-2018 IPR036629 YjbJ superfamily BJD13_16630 2a9386f0a5fb9906a54cd3a12ee0df25 62 Pfam PF05532 CsbD-like 4 56 4.0E-19 T 17-10-2018 IPR008462 CsbD-like domain BJD13_06175 639231e1bb4ac51fa87a3d2eddfc9bb3 176 SUPERFAMILY SSF55961 17 156 2.16E-13 T 17-10-2018 BJD13_06175 639231e1bb4ac51fa87a3d2eddfc9bb3 176 Gene3D G3DSA:3.30.530.20 15 161 1.2E-18 T 17-10-2018 IPR023393 START-like domain superfamily BJD13_03035 253479b18bc532c6360c259fbd6ca37c 135 SUPERFAMILY SSF54593 18 130 3.03E-19 T 17-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD13_03035 253479b18bc532c6360c259fbd6ca37c 135 Gene3D G3DSA:3.10.180.10 2 132 4.3E-17 T 17-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD13_03035 253479b18bc532c6360c259fbd6ca37c 135 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 19 123 7.1E-5 T 17-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BJD13_21690 1e389d8d97e073cdde462d8f20c4cf21 818 Gene3D G3DSA:2.170.130.10 40 186 3.2E-20 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_21690 1e389d8d97e073cdde462d8f20c4cf21 818 Gene3D G3DSA:2.40.170.20 195 818 2.6E-50 T 17-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BJD13_21690 1e389d8d97e073cdde462d8f20c4cf21 818 Pfam PF00593 TonB dependent receptor 332 816 1.1E-23 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_21690 1e389d8d97e073cdde462d8f20c4cf21 818 Pfam PF07715 TonB-dependent Receptor Plug Domain 62 175 2.0E-17 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_21690 1e389d8d97e073cdde462d8f20c4cf21 818 SUPERFAMILY SSF56935 39 818 1.7E-87 T 17-10-2018 BJD13_21170 152f22830d03237d6ab0a917e1cda72a 433 Pfam PF01565 FAD binding domain 35 142 3.7E-18 T 17-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 BJD13_21170 152f22830d03237d6ab0a917e1cda72a 433 SUPERFAMILY SSF56176 31 174 3.78E-33 T 17-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 BJD13_21170 152f22830d03237d6ab0a917e1cda72a 433 Gene3D G3DSA:3.30.465.10 63 186 1.2E-20 T 17-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 BJD13_18265 016f347283f663cfaa188786b6cbb01a 131 SUPERFAMILY SSF54593 7 128 2.31E-13 T 17-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD13_18265 016f347283f663cfaa188786b6cbb01a 131 Gene3D G3DSA:3.10.180.10 2 131 2.6E-12 T 17-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD13_10320 325b6ba25ac080a1e9719b9de762f119 128 Pfam PF05656 Protein of unknown function (DUF805) 11 126 1.2E-34 T 17-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 BJD13_14870 55c620ca7ad4eaf5e5b550b17f24cbb4 233 TIGRFAM TIGR02499 HrpE_YscL_not: type III secretion apparatus protein, HrpE/YscL family 47 206 7.0E-35 T 17-10-2018 IPR012842 Type III secretion system HrpE/YscL BJD13_14870 55c620ca7ad4eaf5e5b550b17f24cbb4 233 Pfam PF02108 Flagellar assembly protein FliH 113 212 1.8E-7 T 17-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE BJD13_22525 7deb866481f20365f4de2bd3388d8a69 891 Pfam PF11838 ERAP1-like C-terminal domain 558 878 4.4E-38 T 17-10-2018 IPR024571 ERAP1-like C-terminal domain BJD13_22525 7deb866481f20365f4de2bd3388d8a69 891 Pfam PF01433 Peptidase family M1 domain 249 465 1.6E-67 T 17-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 BJD13_22525 7deb866481f20365f4de2bd3388d8a69 891 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 160 175 1.7E-21 T 17-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 BJD13_22525 7deb866481f20365f4de2bd3388d8a69 891 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 293 303 1.7E-21 T 17-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 BJD13_22525 7deb866481f20365f4de2bd3388d8a69 891 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 347 359 1.7E-21 T 17-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 BJD13_22525 7deb866481f20365f4de2bd3388d8a69 891 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 208 223 1.7E-21 T 17-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 BJD13_22525 7deb866481f20365f4de2bd3388d8a69 891 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 328 343 1.7E-21 T 17-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 BJD13_22525 7deb866481f20365f4de2bd3388d8a69 891 SUPERFAMILY SSF63737 27 225 1.7E-49 T 17-10-2018 BJD13_22525 7deb866481f20365f4de2bd3388d8a69 891 Gene3D G3DSA:1.25.50.20 597 890 4.4E-15 T 17-10-2018 BJD13_22525 7deb866481f20365f4de2bd3388d8a69 891 Gene3D G3DSA:1.10.390.60 239 498 1.2E-77 T 17-10-2018 BJD13_22525 7deb866481f20365f4de2bd3388d8a69 891 SUPERFAMILY SSF55486 243 487 6.15E-72 T 17-10-2018 BJD13_22525 7deb866481f20365f4de2bd3388d8a69 891 Gene3D G3DSA:2.60.40.1730 21 226 1.5E-54 T 17-10-2018 BJD13_23630 e588ffdd151d02e539ccd7c88489c085 117 Pfam PF06993 Protein of unknown function (DUF1304) 11 114 1.7E-38 T 17-10-2018 IPR009732 Protein of unknown function DUF1304 BJD13_19190 9af4c40184860137b6c3fba69c76727b 221 Gene3D G3DSA:1.10.10.10 122 219 2.4E-25 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_19190 9af4c40184860137b6c3fba69c76727b 221 SMART SM00448 1 112 8.0E-33 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_19190 9af4c40184860137b6c3fba69c76727b 221 SMART SM00862 145 216 5.2E-23 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD13_19190 9af4c40184860137b6c3fba69c76727b 221 Gene3D G3DSA:3.40.50.2300 1 121 7.0E-33 T 17-10-2018 BJD13_19190 9af4c40184860137b6c3fba69c76727b 221 Pfam PF00072 Response regulator receiver domain 4 112 4.9E-21 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_19190 9af4c40184860137b6c3fba69c76727b 221 SUPERFAMILY SSF46894 125 215 1.76E-24 T 17-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BJD13_19190 9af4c40184860137b6c3fba69c76727b 221 SUPERFAMILY SSF52172 1 118 1.11E-33 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_19190 9af4c40184860137b6c3fba69c76727b 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 215 9.5E-20 T 17-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BJD13_12885 4b4add5f5d538416c02690491ae3aff5 105 Gene3D G3DSA:2.30.30.110 2 102 1.4E-25 T 17-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor BJD13_12885 4b4add5f5d538416c02690491ae3aff5 105 SUPERFAMILY SSF50118 4 101 2.55E-23 T 17-10-2018 BJD13_12885 4b4add5f5d538416c02690491ae3aff5 105 ProDom PD012578 PLASMID TOXIN CCDB CYTOTOXIC LETB POST-SEGREGATION SYSTEM CCDB-LIKE GYRASE FUSED-CCDB 18 100 8.0E-6 T 17-10-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 BJD13_12885 4b4add5f5d538416c02690491ae3aff5 105 Pfam PF01845 CcdB protein 4 101 3.7E-28 T 17-10-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 BJD13_03555 1419b7d5f7b8f20bad137f5ad514c8cf 472 Pfam PF02706 Chain length determinant protein 23 111 3.9E-12 T 17-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 BJD13_03555 1419b7d5f7b8f20bad137f5ad514c8cf 472 Pfam PF13807 G-rich domain on putative tyrosine kinase 387 460 7.0E-21 T 17-10-2018 IPR032807 Tyrosine kinase, G-rich domain BJD13_17950 33771dabe7d2fdd91675b733d89e866c 778 Pfam PF05593 RHS Repeat 67 100 1.6E-6 T 17-10-2018 IPR031325 RHS repeat BJD13_07940 12f0d4de00f9ef34217ed05bf46e08fc 646 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 112 606 1.1E-240 T 17-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 BJD13_07940 12f0d4de00f9ef34217ed05bf46e08fc 646 Gene3D G3DSA:1.20.58.760 415 612 3.5E-74 T 17-10-2018 BJD13_07940 12f0d4de00f9ef34217ed05bf46e08fc 646 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 6 627 37.551 T 17-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 BJD13_07940 12f0d4de00f9ef34217ed05bf46e08fc 646 Pfam PF01434 Peptidase family M41 395 604 6.0E-82 T 17-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 BJD13_07940 12f0d4de00f9ef34217ed05bf46e08fc 646 Gene3D G3DSA:2.40.50.920 29 107 8.5E-7 T 17-10-2018 BJD13_07940 12f0d4de00f9ef34217ed05bf46e08fc 646 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 201 333 3.9E-46 T 17-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BJD13_07940 12f0d4de00f9ef34217ed05bf46e08fc 646 ProSitePatterns PS00674 AAA-protein family signature. 304 322 - T 17-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 BJD13_07940 12f0d4de00f9ef34217ed05bf46e08fc 646 Pfam PF06480 FtsH Extracellular 8 100 5.2E-10 T 17-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 BJD13_07940 12f0d4de00f9ef34217ed05bf46e08fc 646 Gene3D G3DSA:1.10.8.60 335 412 3.8E-29 T 17-10-2018 BJD13_07940 12f0d4de00f9ef34217ed05bf46e08fc 646 SUPERFAMILY SSF52540 159 404 2.95E-73 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_07940 12f0d4de00f9ef34217ed05bf46e08fc 646 SUPERFAMILY SSF140990 416 615 2.35E-76 T 17-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 BJD13_07940 12f0d4de00f9ef34217ed05bf46e08fc 646 Gene3D G3DSA:3.40.50.300 155 333 3.2E-70 T 17-10-2018 BJD13_07940 12f0d4de00f9ef34217ed05bf46e08fc 646 SMART SM00382 197 336 1.6E-26 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_16520 73dc408b252a665eda852f5b5134bb59 444 Gene3D G3DSA:3.30.2290.10 3 219 1.0E-13 T 17-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal BJD13_16520 73dc408b252a665eda852f5b5134bb59 444 Pfam PF01523 Putative modulator of DNA gyrase 25 309 2.3E-52 T 17-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 BJD13_16520 73dc408b252a665eda852f5b5134bb59 444 SUPERFAMILY SSF111283 6 438 1.83E-90 T 17-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 BJD13_21455 f87be3361da4d8c39cd55ed46f625357 211 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD13_03165 34528a08aab9ffe8d8fdae2663db40ac 363 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 24 357 24.029 T 17-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_03165 34528a08aab9ffe8d8fdae2663db40ac 363 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 229 242 - T 17-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_03165 34528a08aab9ffe8d8fdae2663db40ac 363 Pfam PF00146 NADH dehydrogenase 31 351 2.6E-117 T 17-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_18490 bb8c84d2d0b7b7c45fafeb4718ab40cd 347 Pfam PF06812 ImpA, N-terminal, type VI secretion system 11 134 1.0E-34 T 17-10-2018 IPR010657 ImpA, N-terminal BJD13_18490 bb8c84d2d0b7b7c45fafeb4718ab40cd 347 TIGRFAM TIGR03363 VI_chp_8: type VI secretion-associated protein, ImpA family 6 342 6.4E-102 T 17-10-2018 IPR017740 Type VI secretion system-associated, ImpA BJD13_15890 d2a5862f5d5166ef55f4b17150090f6c 106 Pfam PF13698 Domain of unknown function (DUF4156) 22 103 1.7E-10 T 17-10-2018 IPR025294 Protein of unknown function DUF4156 BJD13_08690 bb65f6c72b94455cac4f420fa26c96c8 260 Gene3D G3DSA:1.10.12.10 203 260 2.5E-16 T 17-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal BJD13_08690 bb65f6c72b94455cac4f420fa26c96c8 260 SUPERFAMILY SSF52096 2 259 4.02E-88 T 17-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BJD13_08690 bb65f6c72b94455cac4f420fa26c96c8 260 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 259 8.1E-67 T 17-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 BJD13_08690 bb65f6c72b94455cac4f420fa26c96c8 260 Gene3D G3DSA:3.90.226.10 1 202 2.3E-76 T 17-10-2018 BJD13_08690 bb65f6c72b94455cac4f420fa26c96c8 260 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 101 121 - T 17-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 BJD13_14715 f06b0e7bd91f41faad456dae2e64b78d 143 Pfam PF06903 VirK protein 26 120 2.7E-38 T 17-10-2018 IPR010694 Uncharacterised protein family VirK BJD13_09730 fb102ca29ffbc5e9cf7d4f71e6edf3e0 854 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 22 303 8.2E-8 T 17-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD BJD13_09730 fb102ca29ffbc5e9cf7d4f71e6edf3e0 854 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 542 828 7.2E-95 T 17-10-2018 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal BJD13_09730 fb102ca29ffbc5e9cf7d4f71e6edf3e0 854 SUPERFAMILY SSF55729 648 826 8.02E-17 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD13_17675 111745492f62e196cc9c9cc46b295a90 437 Pfam PF07690 Major Facilitator Superfamily 28 384 5.4E-56 T 17-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD13_17675 111745492f62e196cc9c9cc46b295a90 437 Gene3D G3DSA:1.20.1250.20 9 425 2.3E-85 T 17-10-2018 BJD13_17675 111745492f62e196cc9c9cc46b295a90 437 SUPERFAMILY SSF103473 13 426 1.44E-82 T 17-10-2018 IPR036259 MFS transporter superfamily BJD13_03635 acdb1dd206d774b10b23f369d2d4de4a 384 SUPERFAMILY SSF53448 45 280 5.91E-15 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD13_03635 acdb1dd206d774b10b23f369d2d4de4a 384 Pfam PF13506 Glycosyl transferase family 21 100 272 9.4E-36 T 17-10-2018 IPR025993 Ceramide glucosyltransferase GO:0016757 KEGG: 00600+2.4.1.80|MetaCyc: PWY-5129|MetaCyc: PWY-7836|MetaCyc: PWY-7838|MetaCyc: PWY-7839|MetaCyc: PWY-7841|Reactome: R-HSA-1660662 BJD13_03635 acdb1dd206d774b10b23f369d2d4de4a 384 Gene3D G3DSA:3.90.550.10 40 251 3.1E-5 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD13_00250 e135852dbb5e5935f3728940353968c1 229 Pfam PF03929 PepSY-associated TM region 9 225 1.2E-8 T 17-10-2018 IPR005625 PepSY-associated TM protein BJD13_14520 aca98cbc8e347f5dd731006a4214d806 109 SUPERFAMILY SSF46565 11 107 1.11E-21 T 17-10-2018 IPR036869 Chaperone J-domain superfamily BJD13_14520 aca98cbc8e347f5dd731006a4214d806 109 Gene3D G3DSA:1.10.287.110 37 109 2.1E-16 T 17-10-2018 IPR036869 Chaperone J-domain superfamily BJD13_14520 aca98cbc8e347f5dd731006a4214d806 109 PRINTS PR00625 DnaJ domain signature 88 108 1.1E-10 T 17-10-2018 IPR001623 DnaJ domain BJD13_14520 aca98cbc8e347f5dd731006a4214d806 109 PRINTS PR00625 DnaJ domain signature 66 81 1.1E-10 T 17-10-2018 IPR001623 DnaJ domain BJD13_14520 aca98cbc8e347f5dd731006a4214d806 109 PRINTS PR00625 DnaJ domain signature 48 66 1.1E-10 T 17-10-2018 IPR001623 DnaJ domain BJD13_14520 aca98cbc8e347f5dd731006a4214d806 109 Pfam PF00226 DnaJ domain 46 106 3.1E-13 T 17-10-2018 IPR001623 DnaJ domain BJD13_14520 aca98cbc8e347f5dd731006a4214d806 109 SMART SM00271 45 108 2.7E-16 T 17-10-2018 IPR001623 DnaJ domain BJD13_22365 140f9a072151bc9901dfd1481d7063e7 257 Pfam PF02265 S1/P1 Nuclease 13 254 1.3E-62 T 17-10-2018 IPR003154 S1/P1 nuclease GO:0003676|GO:0004519|GO:0006308 BJD13_22365 140f9a072151bc9901dfd1481d7063e7 257 Gene3D G3DSA:1.10.575.10 13 256 1.0E-67 T 17-10-2018 IPR008947 Phospholipase C/P1 nuclease domain superfamily GO:0016788 BJD13_22365 140f9a072151bc9901dfd1481d7063e7 257 SUPERFAMILY SSF48537 13 252 5.76E-60 T 17-10-2018 IPR008947 Phospholipase C/P1 nuclease domain superfamily GO:0016788 BJD13_15825 7e2cf8ff8ae38791a1b302e8fb05bf95 192 Pfam PF09832 Uncharacterized protein conserved in bacteria (DUF2059) 116 173 3.5E-17 T 17-10-2018 IPR018637 Domain of unknown function DUF2059 BJD13_23270 fd8a7fbc4c06452534a03faddb8ceec3 182 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 85 101 4.1E-12 T 17-10-2018 IPR002177 DNA-binding protein Dps BJD13_23270 fd8a7fbc4c06452534a03faddb8ceec3 182 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 61 77 4.1E-12 T 17-10-2018 IPR002177 DNA-binding protein Dps BJD13_23270 fd8a7fbc4c06452534a03faddb8ceec3 182 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 159 177 4.1E-12 T 17-10-2018 IPR002177 DNA-binding protein Dps BJD13_23270 fd8a7fbc4c06452534a03faddb8ceec3 182 Gene3D G3DSA:1.20.1260.10 19 182 1.1E-56 T 17-10-2018 IPR012347 Ferritin-like BJD13_23270 fd8a7fbc4c06452534a03faddb8ceec3 182 ProSitePatterns PS00819 Dps protein family signature 2. 87 101 - T 17-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 BJD13_23270 fd8a7fbc4c06452534a03faddb8ceec3 182 SUPERFAMILY SSF47240 28 182 2.22E-45 T 17-10-2018 IPR009078 Ferritin-like superfamily BJD13_23270 fd8a7fbc4c06452534a03faddb8ceec3 182 PIRSF PIRSF005900 20 182 1.2E-46 T 17-10-2018 IPR002177 DNA-binding protein Dps BJD13_23270 fd8a7fbc4c06452534a03faddb8ceec3 182 Pfam PF00210 Ferritin-like domain 42 182 2.3E-29 T 17-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 BJD13_23270 fd8a7fbc4c06452534a03faddb8ceec3 182 ProSitePatterns PS00818 Dps protein family signature 1. 61 77 - T 17-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 BJD13_02180 72a71f2452e7a4f5b90b41b49084fab2 416 Pfam PF05684 Protein of unknown function (DUF819) 17 412 4.5E-145 T 17-10-2018 IPR008537 Protein of unknown function DUF819 BJD13_21750 fc210fdc70eaa42041114a094c97ba9b 181 SUPERFAMILY SSF54427 44 162 1.63E-23 T 17-10-2018 IPR032710 NTF2-like domain superfamily BJD13_21750 fc210fdc70eaa42041114a094c97ba9b 181 Gene3D G3DSA:3.10.450.50 43 166 3.4E-24 T 17-10-2018 BJD13_21750 fc210fdc70eaa42041114a094c97ba9b 181 Pfam PF12680 SnoaL-like domain 48 155 3.7E-11 T 17-10-2018 IPR037401 SnoaL-like domain BJD13_07290 c7f2c5173cac8c2114c26bfdfd61a3ea 566 PIRSF PIRSF029745 2 566 4.2E-137 T 17-10-2018 IPR027282 Two partner secretion pathway transporter GO:0015031 BJD13_07290 c7f2c5173cac8c2114c26bfdfd61a3ea 566 Pfam PF17287 POTRA domain 159 210 3.4E-16 T 17-10-2018 IPR035251 ShlB, POTRA domain BJD13_07290 c7f2c5173cac8c2114c26bfdfd61a3ea 566 Gene3D G3DSA:2.40.160.50 187 566 1.6E-91 T 17-10-2018 BJD13_07290 c7f2c5173cac8c2114c26bfdfd61a3ea 566 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 215 530 3.6E-103 T 17-10-2018 IPR005565 Haemolysin activator HlyB, C-terminal BJD13_07290 c7f2c5173cac8c2114c26bfdfd61a3ea 566 Pfam PF08479 POTRA domain, ShlB-type 79 156 7.3E-13 T 17-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type BJD13_10410 a2bc67343df33443f7fc45d80fb90f85 135 SUPERFAMILY SSF54637 10 133 1.34E-35 T 17-10-2018 IPR029069 HotDog domain superfamily BJD13_10410 a2bc67343df33443f7fc45d80fb90f85 135 Gene3D G3DSA:3.10.129.10 1 135 7.1E-47 T 17-10-2018 BJD13_10410 a2bc67343df33443f7fc45d80fb90f85 135 Pfam PF13279 Thioesterase-like superfamily 15 132 9.7E-22 T 17-10-2018 BJD13_15460 d7caf47657d83c141b7298b45d985bd1 270 Pfam PF01026 TatD related DNase 4 259 3.2E-70 T 17-10-2018 IPR001130 TatD family GO:0016788 BJD13_15460 d7caf47657d83c141b7298b45d985bd1 270 SUPERFAMILY SSF51556 3 261 5.3E-82 T 17-10-2018 IPR032466 Metal-dependent hydrolase BJD13_15460 d7caf47657d83c141b7298b45d985bd1 270 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 126 136 - T 17-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 BJD13_15460 d7caf47657d83c141b7298b45d985bd1 270 Gene3D G3DSA:3.20.20.140 1 267 2.8E-96 T 17-10-2018 BJD13_15460 d7caf47657d83c141b7298b45d985bd1 270 PIRSF PIRSF005902 1 264 2.7E-73 T 17-10-2018 IPR001130 TatD family GO:0016788 BJD13_15460 d7caf47657d83c141b7298b45d985bd1 270 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 192 208 - T 17-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 BJD13_00690 14d6aeeb4a63d6779aa28c8d6e904354 91 Pfam PF07178 TraL protein 3 71 2.1E-20 T 17-10-2018 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 BJD13_00690 14d6aeeb4a63d6779aa28c8d6e904354 91 TIGRFAM TIGR02762 TraL_TIGR: type IV conjugative transfer system protein TraL 2 77 2.3E-12 T 17-10-2018 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 BJD13_18445 6c9f809ee1e269fe12c1e3854fa9abe7 444 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 4 443 9.0E-160 T 17-10-2018 IPR010263 Type VI secretion protein, VC_A0114 BJD13_18445 6c9f809ee1e269fe12c1e3854fa9abe7 444 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 18 442 2.6E-151 T 17-10-2018 IPR010263 Type VI secretion protein, VC_A0114 BJD13_17415 9ab49c480838aa81554cbc3a960c4abc 453 ProSitePatterns PS00216 Sugar transport proteins signature 1. 309 326 - T 17-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 BJD13_17415 9ab49c480838aa81554cbc3a960c4abc 453 Pfam PF00083 Sugar (and other) transporter 33 438 3.3E-33 T 17-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 BJD13_17415 9ab49c480838aa81554cbc3a960c4abc 453 Gene3D G3DSA:1.20.1250.20 28 452 9.9E-66 T 17-10-2018 BJD13_17415 9ab49c480838aa81554cbc3a960c4abc 453 SUPERFAMILY SSF103473 30 440 2.09E-54 T 17-10-2018 IPR036259 MFS transporter superfamily BJD13_17415 9ab49c480838aa81554cbc3a960c4abc 453 ProSitePatterns PS00217 Sugar transport proteins signature 2. 135 160 - T 17-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 BJD13_04585 c8b2bd8a0eb2cc6a773c699f20c54ffd 454 Gene3D G3DSA:1.20.1740.10 7 452 4.4E-59 T 17-10-2018 BJD13_04585 c8b2bd8a0eb2cc6a773c699f20c54ffd 454 PIRSF PIRSF006060 1 447 1.2E-67 T 17-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BJD13_04585 c8b2bd8a0eb2cc6a773c699f20c54ffd 454 TIGRFAM TIGR00908 2A0305: ethanolamine permease 7 440 8.2E-184 T 17-10-2018 IPR004757 Ethanolamine permease BJD13_04585 c8b2bd8a0eb2cc6a773c699f20c54ffd 454 Pfam PF13520 Amino acid permease 13 422 1.0E-39 T 17-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BJD13_14720 3ce9063132a75bc43d6a16991edfe767 469 Pfam PF13454 FAD-NAD(P)-binding 7 149 2.6E-24 T 17-10-2018 IPR038732 FAD-dependent urate hydroxylase HpyO, FAD/NAD(P)-binding domain BJD13_14720 3ce9063132a75bc43d6a16991edfe767 469 SUPERFAMILY SSF51905 1 214 4.07E-15 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_14720 3ce9063132a75bc43d6a16991edfe767 469 SUPERFAMILY SSF51905 186 445 2.81E-7 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_14720 3ce9063132a75bc43d6a16991edfe767 469 Pfam PF00890 FAD binding domain 395 424 4.4E-5 T 17-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 BJD13_18305 9455dd1fbac1739030f8eed4df19f7ac 497 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 19 492 1.2E-216 T 17-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath BJD13_18305 9455dd1fbac1739030f8eed4df19f7ac 497 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 68 492 1.1E-189 T 17-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath BJD13_05495 018519ce150b106ca996eeb7a5c44101 143 SUPERFAMILY SSF54534 33 140 6.09E-38 T 17-10-2018 BJD13_05495 018519ce150b106ca996eeb7a5c44101 143 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 42 138 2.9E-34 T 17-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain BJD13_05495 018519ce150b106ca996eeb7a5c44101 143 Gene3D G3DSA:3.10.50.40 29 143 3.7E-42 T 17-10-2018 BJD13_16565 3b3bf62117127c3af22f827ef7a28a94 157 SUPERFAMILY SSF55961 4 141 8.75E-20 T 17-10-2018 BJD13_16565 3b3bf62117127c3af22f827ef7a28a94 157 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 13 133 1.6E-6 T 17-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like BJD13_16565 3b3bf62117127c3af22f827ef7a28a94 157 Gene3D G3DSA:3.30.530.20 3 145 7.3E-27 T 17-10-2018 IPR023393 START-like domain superfamily BJD13_19795 de9fef3d51bdec43d283506bd55bd351 280 Gene3D G3DSA:3.40.50.2300 5 137 3.3E-20 T 17-10-2018 BJD13_19795 de9fef3d51bdec43d283506bd55bd351 280 Pfam PF00072 Response regulator receiver domain 16 129 1.5E-13 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_19795 de9fef3d51bdec43d283506bd55bd351 280 Pfam PF00072 Response regulator receiver domain 143 264 5.0E-16 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_19795 de9fef3d51bdec43d283506bd55bd351 280 SUPERFAMILY SSF52172 14 134 4.13E-22 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_19795 de9fef3d51bdec43d283506bd55bd351 280 SMART SM00448 141 264 8.1E-20 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_19795 de9fef3d51bdec43d283506bd55bd351 280 SMART SM00448 14 129 3.4E-10 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_19795 de9fef3d51bdec43d283506bd55bd351 280 SUPERFAMILY SSF52172 141 276 1.2E-23 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_19795 de9fef3d51bdec43d283506bd55bd351 280 Gene3D G3DSA:3.40.50.2300 140 277 1.2E-22 T 17-10-2018 BJD13_03400 dfd61cd89e1949d87019775369d4dd49 103 Pfam PF05101 Type IV secretory pathway, VirB3-like protein 2 83 3.2E-23 T 17-10-2018 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB BJD13_21495 4cf0e19d9bc4e2cabb13560126a9169c 191 Pfam PF04973 Nicotinamide mononucleotide transporter 2 180 6.7E-49 T 17-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 BJD13_21495 4cf0e19d9bc4e2cabb13560126a9169c 191 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 2 185 1.7E-23 T 17-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 BJD13_22790 e5fea22a21109fef96e2d8f59527c23e 331 SUPERFAMILY SSF55120 84 321 8.43E-77 T 17-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD13_22790 e5fea22a21109fef96e2d8f59527c23e 331 Pfam PF00849 RNA pseudouridylate synthase 99 248 1.7E-34 T 17-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD13_22790 e5fea22a21109fef96e2d8f59527c23e 331 Gene3D G3DSA:3.30.2350.10 91 322 1.3E-73 T 17-10-2018 BJD13_22790 e5fea22a21109fef96e2d8f59527c23e 331 Gene3D G3DSA:3.10.290.10 14 81 8.8E-16 T 17-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 BJD13_22790 e5fea22a21109fef96e2d8f59527c23e 331 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 22 319 4.4E-94 T 17-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD13_22790 e5fea22a21109fef96e2d8f59527c23e 331 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 141 155 - T 17-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 BJD13_22790 e5fea22a21109fef96e2d8f59527c23e 331 SUPERFAMILY SSF55174 25 74 6.18E-5 T 17-10-2018 BJD13_14415 cdee53de4e69b58689e22b86789c5405 69 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 50 3.3E-13 T 17-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain BJD13_14415 cdee53de4e69b58689e22b86789c5405 69 Gene3D G3DSA:1.10.10.1100 1 56 1.2E-19 T 17-10-2018 BJD13_01210 29ffcb2dd3d12946446c61c34b8530c4 139 ProDom PD031251 TRAK PLASMID ORIT BINDING TRANSFER SYSTEM DNA ORIT-BINDING SEQUENCING DIRECT 5 75 2.0E-27 T 17-10-2018 IPR035225 Protein of unknown function DUF5338 BJD13_01210 29ffcb2dd3d12946446c61c34b8530c4 139 Pfam PF17273 Family of unknown function (DUF5338) 8 74 6.7E-26 T 17-10-2018 IPR035225 Protein of unknown function DUF5338 BJD13_05385 e07dd3671cb57a1cf02e23d500337c6f 345 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 23 336 3.9E-106 T 17-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 BJD13_05385 e07dd3671cb57a1cf02e23d500337c6f 345 SUPERFAMILY SSF52540 52 201 1.14E-12 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_05385 e07dd3671cb57a1cf02e23d500337c6f 345 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 7 341 37.719 T 17-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 BJD13_05385 e07dd3671cb57a1cf02e23d500337c6f 345 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 29 325 4.7E-67 T 17-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 BJD13_15840 ffe3e1b0f70e68e157bff7c3e643411d 557 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 1 554 49.634 T 17-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 BJD13_15840 ffe3e1b0f70e68e157bff7c3e643411d 557 SUPERFAMILY SSF56112 92 439 1.14E-32 T 17-10-2018 IPR011009 Protein kinase-like domain superfamily BJD13_15840 ffe3e1b0f70e68e157bff7c3e643411d 557 Pfam PF03109 ABC1 family 111 232 7.4E-30 T 17-10-2018 IPR004147 UbiB domain BJD13_15840 ffe3e1b0f70e68e157bff7c3e643411d 557 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 5 449 1.1E-182 T 17-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 BJD13_20380 7c695820e9da62996648584590e1fbd1 715 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 70 715 2.5E-102 T 17-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 BJD13_20380 7c695820e9da62996648584590e1fbd1 715 Pfam PF07715 TonB-dependent Receptor Plug Domain 67 170 8.6E-17 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_20380 7c695820e9da62996648584590e1fbd1 715 Gene3D G3DSA:2.40.170.20 180 715 1.2E-118 T 17-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BJD13_20380 7c695820e9da62996648584590e1fbd1 715 Pfam PF00593 TonB dependent receptor 245 714 9.5E-63 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_20380 7c695820e9da62996648584590e1fbd1 715 Gene3D G3DSA:2.170.130.10 50 179 7.5E-30 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_20380 7c695820e9da62996648584590e1fbd1 715 SUPERFAMILY SSF56935 31 715 1.89E-128 T 17-10-2018 BJD13_06080 839ebb841dc0d6dceca558f4d1f5ac04 85 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 40 59 5.9E-6 T 17-10-2018 IPR019626 Stress-induced protein, KGG, repeat BJD13_05805 2876d35f2c9e4018574c8d7d2029748f 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 115 129 3.1E-10 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_05805 2876d35f2c9e4018574c8d7d2029748f 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 129 145 3.1E-10 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_05805 2876d35f2c9e4018574c8d7d2029748f 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 145 157 3.1E-10 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_05805 2876d35f2c9e4018574c8d7d2029748f 204 SMART SM00421 112 169 1.7E-17 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_05805 2876d35f2c9e4018574c8d7d2029748f 204 Gene3D G3DSA:1.10.10.10 106 170 2.5E-19 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_05805 2876d35f2c9e4018574c8d7d2029748f 204 Pfam PF00196 Bacterial regulatory proteins, luxR family 114 169 2.8E-17 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_05805 2876d35f2c9e4018574c8d7d2029748f 204 SUPERFAMILY SSF46894 96 174 9.52E-19 T 17-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BJD13_06850 774edbe5764d5ae2729639742df721a6 752 SUPERFAMILY SSF58104 415 697 1.57E-72 T 17-10-2018 BJD13_06850 774edbe5764d5ae2729639742df721a6 752 SUPERFAMILY SSF158472 215 264 1.01E-7 T 17-10-2018 BJD13_06850 774edbe5764d5ae2729639742df721a6 752 SMART SM00283 448 695 1.8E-88 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD13_06850 774edbe5764d5ae2729639742df721a6 752 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 508 662 5.1E-54 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD13_06850 774edbe5764d5ae2729639742df721a6 752 SMART SM00304 395 447 19.0 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_06850 774edbe5764d5ae2729639742df721a6 752 SMART SM00304 215 267 8.2E-4 T 17-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BJD13_06850 774edbe5764d5ae2729639742df721a6 752 Gene3D G3DSA:1.20.120.1530 206 352 3.2E-23 T 17-10-2018 BJD13_06850 774edbe5764d5ae2729639742df721a6 752 Gene3D G3DSA:1.10.287.950 395 697 4.8E-87 T 17-10-2018 BJD13_06850 774edbe5764d5ae2729639742df721a6 752 Pfam PF12729 Four helix bundle sensory module for signal transduction 7 175 2.8E-17 T 17-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain BJD13_09050 b957cc1b22565981ae86de080e9665bc 131 Pfam PF04355 SmpA / OmlA family 28 98 2.7E-21 T 17-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 BJD13_09050 b957cc1b22565981ae86de080e9665bc 131 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 1 118 30.682 T 17-10-2018 IPR026592 Outer membrane protein assembly factor BamE BJD13_09050 b957cc1b22565981ae86de080e9665bc 131 Gene3D G3DSA:3.30.1450.10 34 110 1.7E-29 T 17-10-2018 IPR037873 BamE-like BJD13_10735 42050bb4a8def560f05ed06c2c07acd2 73 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 8 46 1.1E-5 T 17-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 BJD13_10735 42050bb4a8def560f05ed06c2c07acd2 73 SUPERFAMILY SSF89447 1 64 3.14E-12 T 17-10-2018 IPR037914 SpoVT-AbrB domain superfamily BJD13_10735 42050bb4a8def560f05ed06c2c07acd2 73 Gene3D G3DSA:2.10.260.10 1 70 2.1E-5 T 17-10-2018 BJD13_10735 42050bb4a8def560f05ed06c2c07acd2 73 TIGRFAM TIGR02609 doc_partner: putative addiction module antidote 3 73 1.2E-25 T 17-10-2018 IPR013432 Putative addiction module antidote BJD13_10735 42050bb4a8def560f05ed06c2c07acd2 73 SMART SM00966 6 51 3.3E-6 T 17-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 BJD13_12510 1e3262c7fddb9e5bab3715f7c19d3268 163 Pfam PF04536 TPM domain 22 137 1.2E-14 T 17-10-2018 IPR007621 TPM domain BJD13_12510 1e3262c7fddb9e5bab3715f7c19d3268 163 Gene3D G3DSA:3.10.310.50 10 159 1.0E-44 T 17-10-2018 BJD13_07570 9be755e5e53f95956646d7df4be27cf1 243 Pfam PF01569 PAP2 superfamily 108 217 3.2E-20 T 17-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BJD13_07570 9be755e5e53f95956646d7df4be27cf1 243 SUPERFAMILY SSF48317 31 228 1.44E-37 T 17-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily BJD13_07570 9be755e5e53f95956646d7df4be27cf1 243 SMART SM00014 104 213 9.1E-17 T 17-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BJD13_07570 9be755e5e53f95956646d7df4be27cf1 243 Gene3D G3DSA:1.20.144.10 49 133 4.0E-6 T 17-10-2018 BJD13_07570 9be755e5e53f95956646d7df4be27cf1 243 Gene3D G3DSA:1.20.144.10 134 230 3.5E-24 T 17-10-2018 BJD13_14050 5cde673a0305dfee6f2499533d3f8f47 234 Pfam PF06833 Malonate decarboxylase gamma subunit (MdcE) 6 229 2.4E-89 T 17-10-2018 BJD13_14050 5cde673a0305dfee6f2499533d3f8f47 234 SUPERFAMILY SSF52096 17 205 3.91E-18 T 17-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BJD13_14050 5cde673a0305dfee6f2499533d3f8f47 234 Gene3D G3DSA:3.90.226.10 3 219 4.9E-20 T 17-10-2018 BJD13_14050 5cde673a0305dfee6f2499533d3f8f47 234 TIGRFAM TIGR03134 malonate_gamma: biotin-independent malonate decarboxylase, gamma subunit 3 231 6.2E-80 T 17-10-2018 IPR009648 Biotin-dependent malonate decarboxylase, gamma subunit GO:0044262 MetaCyc: PWY-6060 BJD13_15530 e0fc0eb06fecb508aa927f248c4a6110 428 PIRSF PIRSF001235 20 425 1.0E-125 T 17-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 BJD13_15530 e0fc0eb06fecb508aa927f248c4a6110 428 Pfam PF01546 Peptidase family M20/M25/M40 91 420 9.7E-30 T 17-10-2018 IPR002933 Peptidase M20 GO:0016787 BJD13_15530 e0fc0eb06fecb508aa927f248c4a6110 428 SUPERFAMILY SSF55031 228 340 2.09E-25 T 17-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain BJD13_15530 e0fc0eb06fecb508aa927f248c4a6110 428 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 36 417 7.7E-112 T 17-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 BJD13_15530 e0fc0eb06fecb508aa927f248c4a6110 428 Pfam PF07687 Peptidase dimerisation domain 231 326 2.5E-5 T 17-10-2018 IPR011650 Peptidase M20, dimerisation domain BJD13_15530 e0fc0eb06fecb508aa927f248c4a6110 428 SUPERFAMILY SSF53187 31 422 7.78E-77 T 17-10-2018 BJD13_15530 e0fc0eb06fecb508aa927f248c4a6110 428 Gene3D G3DSA:3.30.70.360 227 341 2.8E-132 T 17-10-2018 BJD13_15530 e0fc0eb06fecb508aa927f248c4a6110 428 Gene3D G3DSA:3.40.630.10 37 416 2.8E-132 T 17-10-2018 BJD13_00035 b5d959212aa6c5a2fbcdcb02671a3333 131 Pfam PF14454 Prokaryotic Ubiquitin 6 62 9.7E-8 T 17-10-2018 IPR032866 Prokaryotic Ubiquitin BJD13_04235 2ae57f114bf0beff0b6271587c163d3b 327 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 218 246 - T 17-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 BJD13_04235 2ae57f114bf0beff0b6271587c163d3b 327 SUPERFAMILY SSF53955 192 321 3.01E-45 T 17-10-2018 IPR023346 Lysozyme-like domain superfamily BJD13_04235 2ae57f114bf0beff0b6271587c163d3b 327 Pfam PF01464 Transglycosylase SLT domain 201 298 1.8E-27 T 17-10-2018 IPR008258 Transglycosylase SLT domain 1 BJD13_04235 2ae57f114bf0beff0b6271587c163d3b 327 Gene3D G3DSA:1.10.530.10 189 322 6.6E-43 T 17-10-2018 BJD13_16255 2b2a3ca4735f338706229b56401c9eba 332 Gene3D G3DSA:3.40.190.170 27 332 2.2E-91 T 17-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily BJD13_16255 2b2a3ca4735f338706229b56401c9eba 332 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 45 318 9.1E-70 T 17-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 BJD13_16255 2b2a3ca4735f338706229b56401c9eba 332 PIRSF PIRSF006470 6 327 2.6E-73 T 17-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 BJD13_16255 2b2a3ca4735f338706229b56401c9eba 332 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 46 276 1.9E-56 T 17-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 BJD13_20655 3ace1455de7b25626bcb04fa805869e5 253 Pfam PF01061 ABC-2 type transporter 6 216 5.5E-33 T 17-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 BJD13_20655 3ace1455de7b25626bcb04fa805869e5 253 PIRSF PIRSF006648 7 252 1.5E-26 T 17-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 BJD13_20655 3ace1455de7b25626bcb04fa805869e5 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 193 212 1.5E-14 T 17-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 BJD13_20655 3ace1455de7b25626bcb04fa805869e5 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 55 77 1.5E-14 T 17-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 BJD13_20655 3ace1455de7b25626bcb04fa805869e5 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 136 160 1.5E-14 T 17-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 BJD13_20655 3ace1455de7b25626bcb04fa805869e5 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 99 124 1.5E-14 T 17-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 BJD13_20655 3ace1455de7b25626bcb04fa805869e5 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 173 192 1.5E-14 T 17-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 BJD13_14105 be119eb4a4fc71305b5fa0420535af66 280 Pfam PF09916 Uncharacterized protein conserved in bacteria (DUF2145) 56 257 3.7E-72 T 17-10-2018 IPR014547 Uncharacterised conserved protein UCP028477 BJD13_14105 be119eb4a4fc71305b5fa0420535af66 280 PIRSF PIRSF028477 1 280 3.3E-107 T 17-10-2018 IPR014547 Uncharacterised conserved protein UCP028477 BJD13_23735 920b2b079b4892a6a1594dfbece72f35 189 Gene3D G3DSA:2.40.128.110 48 189 1.3E-31 T 17-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily BJD13_23735 920b2b079b4892a6a1594dfbece72f35 189 SUPERFAMILY SSF101874 31 187 1.57E-35 T 17-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily BJD13_23735 920b2b079b4892a6a1594dfbece72f35 189 SMART SM00867 29 187 1.3E-39 T 17-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like BJD13_23735 920b2b079b4892a6a1594dfbece72f35 189 Pfam PF04264 YceI-like domain 47 184 8.3E-25 T 17-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like BJD13_10990 f415100211abbbd5cb058cfb026d1384 1000 Pfam PF00593 TonB dependent receptor 489 997 1.5E-33 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_10990 f415100211abbbd5cb058cfb026d1384 1000 SUPERFAMILY SSF56935 97 997 4.58E-78 T 17-10-2018 BJD13_10990 f415100211abbbd5cb058cfb026d1384 1000 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 101 997 1.1E-210 T 17-10-2018 IPR010104 Bacterial TonB-dependent receptor BJD13_10990 f415100211abbbd5cb058cfb026d1384 1000 Pfam PF07715 TonB-dependent Receptor Plug Domain 120 238 2.9E-14 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_10990 f415100211abbbd5cb058cfb026d1384 1000 Gene3D G3DSA:2.170.130.10 92 243 5.3E-15 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_18760 1c299db1fb66258b3b94e06797e1fc10 333 Gene3D G3DSA:1.20.1510.10 178 251 2.1E-7 T 17-10-2018 IPR027469 Cation efflux transmembrane domain superfamily BJD13_18760 1c299db1fb66258b3b94e06797e1fc10 333 Gene3D G3DSA:1.20.1510.10 23 172 6.4E-24 T 17-10-2018 IPR027469 Cation efflux transmembrane domain superfamily BJD13_18760 1c299db1fb66258b3b94e06797e1fc10 333 Pfam PF01545 Cation efflux family 30 251 4.3E-38 T 17-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 BJD13_18760 1c299db1fb66258b3b94e06797e1fc10 333 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 24 324 6.2E-67 T 17-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 BJD13_18760 1c299db1fb66258b3b94e06797e1fc10 333 SUPERFAMILY SSF161111 22 252 6.8E-51 T 17-10-2018 IPR027469 Cation efflux transmembrane domain superfamily BJD13_08305 3014517ca80dfd65e7a9931922e739e2 201 PIRSF PIRSF024492 21 201 1.7E-76 T 17-10-2018 IPR014519 Uncharacterised conserved protein UCP024492 BJD13_08305 3014517ca80dfd65e7a9931922e739e2 201 Pfam PF04343 Protein of unknown function, DUF488 35 156 1.6E-29 T 17-10-2018 IPR007438 Protein of unknown function DUF488 BJD13_15985 d35ccd015c0fced513e5a145dfb804d1 421 Gene3D G3DSA:1.25.40.10 298 395 2.7E-9 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_15985 d35ccd015c0fced513e5a145dfb804d1 421 SUPERFAMILY SSF48452 309 384 4.12E-5 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_15985 d35ccd015c0fced513e5a145dfb804d1 421 Pfam PF07219 HemY protein N-terminus 33 131 3.6E-17 T 17-10-2018 IPR010817 HemY, N-terminal BJD13_15985 d35ccd015c0fced513e5a145dfb804d1 421 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 6 379 1.8E-46 T 17-10-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 BJD13_18905 6ffc3e3e7368db836029ec59cc7acbf3 197 SUPERFAMILY SSF48403 49 177 3.11E-31 T 17-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily BJD13_18905 6ffc3e3e7368db836029ec59cc7acbf3 197 Pfam PF12796 Ankyrin repeats (3 copies) 54 140 2.7E-11 T 17-10-2018 IPR020683 Ankyrin repeat-containing domain BJD13_18905 6ffc3e3e7368db836029ec59cc7acbf3 197 SMART SM00248 80 109 0.0059 T 17-10-2018 IPR002110 Ankyrin repeat GO:0005515 BJD13_18905 6ffc3e3e7368db836029ec59cc7acbf3 197 SMART SM00248 113 142 35.0 T 17-10-2018 IPR002110 Ankyrin repeat GO:0005515 BJD13_18905 6ffc3e3e7368db836029ec59cc7acbf3 197 SMART SM00248 146 175 8.5 T 17-10-2018 IPR002110 Ankyrin repeat GO:0005515 BJD13_18905 6ffc3e3e7368db836029ec59cc7acbf3 197 SMART SM00248 47 76 4600.0 T 17-10-2018 IPR002110 Ankyrin repeat GO:0005515 BJD13_18905 6ffc3e3e7368db836029ec59cc7acbf3 197 Gene3D G3DSA:1.25.40.20 19 187 1.0E-35 T 17-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily BJD13_08070 013bea86d33e006ac2ed8b0bb2a6f270 166 Pfam PF16242 Pyridoxamine 5'-phosphate oxidase like 8 154 1.8E-52 T 17-10-2018 IPR038725 General stress protein, FMN-binding split barrel domain BJD13_08070 013bea86d33e006ac2ed8b0bb2a6f270 166 Gene3D G3DSA:2.30.110.10 6 165 5.4E-52 T 17-10-2018 IPR012349 FMN-binding split barrel GO:0048037 BJD13_08070 013bea86d33e006ac2ed8b0bb2a6f270 166 SUPERFAMILY SSF50475 9 139 2.06E-38 T 17-10-2018 BJD13_18030 16f171b4be3bcf2366f29460799ee7d7 194 Pfam PF02659 Putative manganese efflux pump 31 186 1.7E-49 T 17-10-2018 IPR003810 Putative manganese efflux pump BJD13_18030 16f171b4be3bcf2366f29460799ee7d7 194 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 1 189 24.462 T 17-10-2018 IPR022929 Putative manganese efflux pump MntP BJD13_00330 c48a04d8935b9f5d0793862577f467ba 97 Gene3D G3DSA:3.30.429.10 35 94 9.9E-8 T 17-10-2018 IPR014347 Tautomerase/MIF superfamily BJD13_00330 c48a04d8935b9f5d0793862577f467ba 97 SUPERFAMILY SSF55331 2 91 1.29E-13 T 17-10-2018 IPR014347 Tautomerase/MIF superfamily BJD13_22835 902780cf0af55bdfc14efad471c4615a 811 Gene3D G3DSA:2.170.130.10 30 175 5.9E-34 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_22835 902780cf0af55bdfc14efad471c4615a 811 Gene3D G3DSA:2.40.170.20 276 786 8.2E-56 T 17-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BJD13_22835 902780cf0af55bdfc14efad471c4615a 811 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 41 - T 17-10-2018 IPR010916 TonB box, conserved site BJD13_22835 902780cf0af55bdfc14efad471c4615a 811 SUPERFAMILY SSF56935 34 811 3.48E-104 T 17-10-2018 BJD13_22835 902780cf0af55bdfc14efad471c4615a 811 Pfam PF00593 TonB dependent receptor 294 797 2.2E-41 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_22835 902780cf0af55bdfc14efad471c4615a 811 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 171 7.3E-22 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_21075 d260ddbc8ae787cf7b6fb6ccf6528bed 111 Pfam PF09361 Phasin protein 8 95 1.9E-6 T 17-10-2018 IPR018968 Phasin BJD13_18375 588bc2afc923bcf0b0719d585ba38e31 433 Pfam PF00328 Histidine phosphatase superfamily (branch 2) 33 144 4.9E-7 T 17-10-2018 IPR000560 Histidine phosphatase superfamily, clade-2 BJD13_18375 588bc2afc923bcf0b0719d585ba38e31 433 SUPERFAMILY SSF53254 32 426 6.39E-47 T 17-10-2018 IPR029033 Histidine phosphatase superfamily BJD13_18375 588bc2afc923bcf0b0719d585ba38e31 433 Gene3D G3DSA:3.40.50.1240 156 279 7.6E-112 T 17-10-2018 IPR029033 Histidine phosphatase superfamily BJD13_18375 588bc2afc923bcf0b0719d585ba38e31 433 Gene3D G3DSA:3.40.50.1240 32 422 7.6E-112 T 17-10-2018 IPR029033 Histidine phosphatase superfamily BJD13_06280 15d39e2feecaf92eeaaa2ce4c5369690 223 SUPERFAMILY SSF89392 37 219 1.84E-43 T 17-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX BJD13_06280 15d39e2feecaf92eeaaa2ce4c5369690 223 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 19 218 9.7E-20 T 17-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 BJD13_06280 15d39e2feecaf92eeaaa2ce4c5369690 223 Gene3D G3DSA:2.50.20.10 34 220 3.9E-46 T 17-10-2018 BJD13_06280 15d39e2feecaf92eeaaa2ce4c5369690 223 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 22 221 31.265 T 17-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 BJD13_06280 15d39e2feecaf92eeaaa2ce4c5369690 223 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 47 211 9.5E-52 T 17-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like BJD13_20385 1c137ddc58a71c82f3b50d1fe3b63c76 221 Pfam PF11445 Protein of unknown function (DUF2894) 12 193 2.8E-61 T 17-10-2018 IPR021549 Protein of unknown function DUF2894 BJD13_08855 919af8f8b4fef639e5ed423d16a1a0f6 281 Pfam PF13557 Putative MetA-pathway of phenol degradation 63 280 3.2E-12 T 17-10-2018 IPR025737 MetA-pathway of phenol degradation, putative BJD13_15665 df48adf0d8836b37189a2cc4180ea523 81 Pfam PF09851 Short C-terminal domain 54 79 2.6E-7 T 17-10-2018 IPR018649 SHOCT domain BJD13_21435 0cc65c33c71826b8b2ebdd45541d58e0 405 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 166 194 - T 17-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 BJD13_21435 0cc65c33c71826b8b2ebdd45541d58e0 405 Gene3D G3DSA:1.20.81.30 260 370 3.7E-24 T 17-10-2018 BJD13_21435 0cc65c33c71826b8b2ebdd45541d58e0 405 Pfam PF00482 Type II secretion system (T2SS), protein F 275 396 5.8E-26 T 17-10-2018 IPR018076 Type II secretion system F domain BJD13_21435 0cc65c33c71826b8b2ebdd45541d58e0 405 Pfam PF00482 Type II secretion system (T2SS), protein F 71 194 1.8E-30 T 17-10-2018 IPR018076 Type II secretion system F domain BJD13_21435 0cc65c33c71826b8b2ebdd45541d58e0 405 Gene3D G3DSA:1.20.81.30 57 173 2.2E-27 T 17-10-2018 BJD13_21435 0cc65c33c71826b8b2ebdd45541d58e0 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 2.8E-22 T 17-10-2018 IPR003004 GspF/PilC family BJD13_21435 0cc65c33c71826b8b2ebdd45541d58e0 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 2.8E-22 T 17-10-2018 IPR003004 GspF/PilC family BJD13_21435 0cc65c33c71826b8b2ebdd45541d58e0 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 2.8E-22 T 17-10-2018 IPR003004 GspF/PilC family BJD13_21435 0cc65c33c71826b8b2ebdd45541d58e0 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 2.8E-22 T 17-10-2018 IPR003004 GspF/PilC family BJD13_12690 9dad01a7921ff1d5be0d1bb7f682a094 844 Gene3D G3DSA:2.120.10.30 105 235 5.7E-15 T 17-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like BJD13_12690 9dad01a7921ff1d5be0d1bb7f682a094 844 Gene3D G3DSA:3.40.50.1820 568 838 1.2E-49 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_12690 9dad01a7921ff1d5be0d1bb7f682a094 844 SUPERFAMILY SSF53474 573 831 7.03E-45 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_12690 9dad01a7921ff1d5be0d1bb7f682a094 844 Pfam PF00326 Prolyl oligopeptidase family 674 832 8.1E-25 T 17-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 BJD13_12690 9dad01a7921ff1d5be0d1bb7f682a094 844 SUPERFAMILY SSF82171 116 556 2.09E-20 T 17-10-2018 BJD13_09940 971d8c4ba211223ff3c1b10d94daa7cf 525 Gene3D G3DSA:3.40.50.620 22 245 8.9E-110 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD13_09940 971d8c4ba211223ff3c1b10d94daa7cf 525 SUPERFAMILY SSF48173 245 501 3.79E-56 T 17-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 BJD13_09940 971d8c4ba211223ff3c1b10d94daa7cf 525 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 21 237 2.3E-67 T 17-10-2018 IPR007357 Deoxyribodipyrimidine photolyase-related protein BJD13_09940 971d8c4ba211223ff3c1b10d94daa7cf 525 Gene3D G3DSA:1.10.579.10 338 458 5.2E-52 T 17-10-2018 BJD13_09940 971d8c4ba211223ff3c1b10d94daa7cf 525 Gene3D G3DSA:1.10.10.1710 459 524 2.7E-19 T 17-10-2018 BJD13_09940 971d8c4ba211223ff3c1b10d94daa7cf 525 Gene3D G3DSA:1.25.40.80 147 334 8.9E-110 T 17-10-2018 BJD13_12575 d4fcc900d0d051968e51821d6ca0aa56 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 108 285 4.8E-16 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD13_12575 d4fcc900d0d051968e51821d6ca0aa56 294 Gene3D G3DSA:1.10.3720.10 88 286 8.2E-23 T 17-10-2018 IPR035906 MetI-like superfamily BJD13_12575 d4fcc900d0d051968e51821d6ca0aa56 294 SUPERFAMILY SSF161098 88 275 2.88E-26 T 17-10-2018 IPR035906 MetI-like superfamily BJD13_12370 55fa15189e7088ea4b68817bc8adab91 133 Pfam PF13202 EF hand 84 100 7.2E-6 T 17-10-2018 IPR002048 EF-hand domain GO:0005509 BJD13_12370 55fa15189e7088ea4b68817bc8adab91 133 Gene3D G3DSA:1.10.238.10 79 133 4.1E-10 T 17-10-2018 BJD13_12370 55fa15189e7088ea4b68817bc8adab91 133 SUPERFAMILY SSF47473 81 131 2.6E-7 T 17-10-2018 IPR011992 EF-hand domain pair BJD13_04450 093660f06b16fd5d7f8ac881debba79f 232 Gene3D G3DSA:3.40.30.10 1 83 2.1E-36 T 17-10-2018 BJD13_04450 093660f06b16fd5d7f8ac881debba79f 232 Gene3D G3DSA:1.20.1050.10 89 216 5.4E-29 T 17-10-2018 BJD13_04450 093660f06b16fd5d7f8ac881debba79f 232 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 74 2.2E-15 T 17-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 BJD13_04450 093660f06b16fd5d7f8ac881debba79f 232 SUPERFAMILY SSF47616 89 222 8.91E-25 T 17-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily BJD13_04450 093660f06b16fd5d7f8ac881debba79f 232 SUPERFAMILY SSF52833 1 81 1.1E-20 T 17-10-2018 IPR036249 Thioredoxin-like superfamily BJD13_04450 093660f06b16fd5d7f8ac881debba79f 232 Pfam PF00043 Glutathione S-transferase, C-terminal domain 155 211 9.7E-8 T 17-10-2018 IPR004046 Glutathione S-transferase, C-terminal BJD13_02245 79ab94a27c8e7b35edf56920dd88eb2c 237 Gene3D G3DSA:3.30.2170.10 4 228 4.7E-73 T 17-10-2018 BJD13_02245 79ab94a27c8e7b35edf56920dd88eb2c 237 Pfam PF04493 Endonuclease V 24 218 4.4E-68 T 17-10-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 BJD13_02245 79ab94a27c8e7b35edf56920dd88eb2c 237 Hamap MF_00801 Endonuclease V [nfi]. 14 227 35.005 T 17-10-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 BJD13_18795 6dec4138e5b4ff7d6867f2e6f27426a6 397 Pfam PF12679 ABC-2 family transporter protein 11 362 1.7E-22 T 17-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 BJD13_21905 0e15a135c06846227c18c7c96776cf0a 612 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 248 398 7.3E-29 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD13_21905 0e15a135c06846227c18c7c96776cf0a 612 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 209 238 6.2E-24 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD13_21905 0e15a135c06846227c18c7c96776cf0a 612 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 286 313 6.2E-24 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD13_21905 0e15a135c06846227c18c7c96776cf0a 612 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 315 344 6.2E-24 T 17-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BJD13_21905 0e15a135c06846227c18c7c96776cf0a 612 SMART SM00283 188 435 6.6E-28 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD13_21905 0e15a135c06846227c18c7c96776cf0a 612 SUPERFAMILY SSF58104 177 438 3.49E-44 T 17-10-2018 BJD13_21905 0e15a135c06846227c18c7c96776cf0a 612 Gene3D G3DSA:1.10.287.950 146 437 2.5E-47 T 17-10-2018 BJD13_06390 513d76a46c6fdbf2fe70b5ee4f32c88e 103 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 4 97 7.3E-19 T 17-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 BJD13_06390 513d76a46c6fdbf2fe70b5ee4f32c88e 103 Pfam PF04316 Anti-sigma-28 factor, FlgM 42 96 6.1E-14 T 17-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal BJD13_06390 513d76a46c6fdbf2fe70b5ee4f32c88e 103 SUPERFAMILY SSF101498 4 97 7.32E-14 T 17-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily BJD13_17780 2fd4a3a82c207ebef4bf41dfc0b80599 129 Gene3D G3DSA:3.10.180.10 7 128 2.7E-42 T 17-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD13_17780 2fd4a3a82c207ebef4bf41dfc0b80599 129 SUPERFAMILY SSF54593 12 124 2.26E-23 T 17-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD13_17780 2fd4a3a82c207ebef4bf41dfc0b80599 129 PRINTS PR00311 Bleomycin resistance protein signature 10 27 4.7E-7 T 17-10-2018 IPR000335 Bleomycin resistance protein GO:0008144|GO:0046677 BJD13_17780 2fd4a3a82c207ebef4bf41dfc0b80599 129 PRINTS PR00311 Bleomycin resistance protein signature 42 53 4.7E-7 T 17-10-2018 IPR000335 Bleomycin resistance protein GO:0008144|GO:0046677 BJD13_10155 bebaf59436645e2e8fab5ad244bd08fe 497 Pfam PF01554 MatE 22 183 2.1E-30 T 17-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BJD13_10155 bebaf59436645e2e8fab5ad244bd08fe 497 Pfam PF01554 MatE 251 411 2.3E-23 T 17-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BJD13_10155 bebaf59436645e2e8fab5ad244bd08fe 497 PIRSF PIRSF006603 1 458 7.3E-113 T 17-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BJD13_10155 bebaf59436645e2e8fab5ad244bd08fe 497 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 424 1.1E-70 T 17-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BJD13_22590 60fc8d13f7a515c9d0e03da0c83e2afd 237 Gene3D G3DSA:3.90.850.10 8 235 2.0E-74 T 17-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 BJD13_22590 60fc8d13f7a515c9d0e03da0c83e2afd 237 SUPERFAMILY SSF56529 22 229 1.57E-63 T 17-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 BJD13_22590 60fc8d13f7a515c9d0e03da0c83e2afd 237 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 26 228 4.4E-53 T 17-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 BJD13_21300 e88415a720de48096113489f48873c54 133 Pfam PF13511 Domain of unknown function (DUF4124) 10 66 1.0E-15 T 17-10-2018 IPR025392 Domain of unknown function DUF4124 BJD13_22000 817151cbfc15121c772665f90aad85a0 271 Pfam PF00106 short chain dehydrogenase 6 200 2.4E-33 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_22000 817151cbfc15121c772665f90aad85a0 271 SUPERFAMILY SSF51735 1 240 2.76E-49 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_22000 817151cbfc15121c772665f90aad85a0 271 Gene3D G3DSA:3.40.50.720 1 271 5.1E-74 T 17-10-2018 BJD13_22000 817151cbfc15121c772665f90aad85a0 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 6.5E-16 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_22000 817151cbfc15121c772665f90aad85a0 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 6.5E-16 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_22000 817151cbfc15121c772665f90aad85a0 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 6.5E-16 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_22000 817151cbfc15121c772665f90aad85a0 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 6.5E-16 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_11225 fdcefcea305e75da2f8599e28267fd3d 435 Pfam PF13289 SIR2-like domain 194 356 2.5E-10 T 17-10-2018 IPR039444 SIR2-like domain BJD13_16240 7ead828d84ba7d370abca3121f87e5d2 527 SUPERFAMILY SSF75005 47 326 9.87E-79 T 17-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily BJD13_16240 7ead828d84ba7d370abca3121f87e5d2 527 SUPERFAMILY SSF49899 344 524 3.4E-27 T 17-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily BJD13_16240 7ead828d84ba7d370abca3121f87e5d2 527 Gene3D G3DSA:2.115.10.20 46 329 2.0E-77 T 17-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily BJD13_16240 7ead828d84ba7d370abca3121f87e5d2 527 Gene3D G3DSA:2.60.120.200 345 525 6.0E-23 T 17-10-2018 BJD13_16240 7ead828d84ba7d370abca3121f87e5d2 527 Pfam PF04616 Glycosyl hydrolases family 43 48 320 2.6E-92 T 17-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 BJD13_13065 e9e925f7165f26b187e761d917550481 366 SUPERFAMILY SSF53756 113 329 1.0E-18 T 17-10-2018 BJD13_13065 e9e925f7165f26b187e761d917550481 366 Gene3D G3DSA:3.40.50.2000 166 330 2.5E-17 T 17-10-2018 BJD13_13065 e9e925f7165f26b187e761d917550481 366 Pfam PF00534 Glycosyl transferases group 1 222 285 5.8E-7 T 17-10-2018 IPR001296 Glycosyl transferase, family 1 BJD13_13615 613be3ff20b735ecb0260c470c5591ee 349 Pfam PF06580 Histidine kinase 158 236 3.1E-20 T 17-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 BJD13_13615 613be3ff20b735ecb0260c470c5591ee 349 SUPERFAMILY SSF55874 216 296 8.78E-7 T 17-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BJD13_23975 19c306a5e9c4ef347a15d61234102fb9 292 Gene3D G3DSA:2.60.40.2500 156 290 5.2E-46 T 17-10-2018 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily BJD13_23975 19c306a5e9c4ef347a15d61234102fb9 292 TIGRFAM TIGR02781 VirB9: P-type conjugative transfer protein VirB9 5 266 7.2E-77 T 17-10-2018 IPR014148 P-type conjugative transfer protein VirB9 BJD13_23975 19c306a5e9c4ef347a15d61234102fb9 292 Pfam PF03524 Conjugal transfer protein 30 263 2.7E-64 T 17-10-2018 IPR010258 Conjugal transfer, TrbG/VirB9/CagX BJD13_00785 2f8503501395684b38f1d82ca8bde74f 203 Pfam PF12705 PD-(D/E)XK nuclease superfamily 57 187 1.2E-4 T 17-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type BJD13_13610 9ae5b6a881ebf7db26f7546aa3c2af8f 245 Pfam PF00072 Response regulator receiver domain 8 117 1.3E-27 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_13610 9ae5b6a881ebf7db26f7546aa3c2af8f 245 Gene3D G3DSA:2.40.50.40 138 204 4.2E-7 T 17-10-2018 BJD13_13610 9ae5b6a881ebf7db26f7546aa3c2af8f 245 Pfam PF04397 LytTr DNA-binding domain 148 242 1.5E-23 T 17-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 BJD13_13610 9ae5b6a881ebf7db26f7546aa3c2af8f 245 Gene3D G3DSA:3.40.50.2300 1 125 3.5E-37 T 17-10-2018 BJD13_13610 9ae5b6a881ebf7db26f7546aa3c2af8f 245 SMART SM00448 6 117 6.5E-33 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_13610 9ae5b6a881ebf7db26f7546aa3c2af8f 245 SMART SM00850 146 243 9.8E-25 T 17-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 BJD13_13610 9ae5b6a881ebf7db26f7546aa3c2af8f 245 SUPERFAMILY SSF52172 5 122 1.71E-36 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_24095 21f0bea50ad4014730289999b75a916a 131 Pfam PF01850 PIN domain 4 116 2.5E-6 T 17-10-2018 IPR002716 PIN domain BJD13_24095 21f0bea50ad4014730289999b75a916a 131 SUPERFAMILY SSF88723 1 117 1.12E-14 T 17-10-2018 IPR029060 PIN-like domain superfamily BJD13_01560 21f0bea50ad4014730289999b75a916a 131 Pfam PF01850 PIN domain 4 116 2.5E-6 T 17-10-2018 IPR002716 PIN domain BJD13_01560 21f0bea50ad4014730289999b75a916a 131 SUPERFAMILY SSF88723 1 117 1.12E-14 T 17-10-2018 IPR029060 PIN-like domain superfamily BJD13_18300 824a0b62b79e06c243d2da27b7905190 169 PIRSF PIRSF028301 1 168 2.7E-57 T 17-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 BJD13_18300 824a0b62b79e06c243d2da27b7905190 169 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 9 159 2.1E-56 T 17-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 BJD13_18300 824a0b62b79e06c243d2da27b7905190 169 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 5 161 1.7E-54 T 17-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 BJD13_22370 22caaec3c612e67cceac198d59f90ea0 204 Gene3D G3DSA:2.40.160.20 23 204 1.1E-39 T 17-10-2018 BJD13_22370 22caaec3c612e67cceac198d59f90ea0 204 Pfam PF03922 OmpW family 45 199 8.3E-31 T 17-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 BJD13_22370 22caaec3c612e67cceac198d59f90ea0 204 SUPERFAMILY SSF56925 24 198 2.51E-18 T 17-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel BJD13_02035 7b1fb4b8214c16be7424a553cf96f9cd 224 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 40 212 5.9E-31 T 17-10-2018 IPR003740 Uncharacterised membrane protein YitT BJD13_17825 8ffe3b2c843cbda3c8da233564ad986b 305 Gene3D G3DSA:3.40.50.620 20 271 1.3E-46 T 17-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BJD13_17825 8ffe3b2c843cbda3c8da233564ad986b 305 Pfam PF01171 PP-loop family 53 217 3.5E-16 T 17-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 BJD13_17825 8ffe3b2c843cbda3c8da233564ad986b 305 PIRSF PIRSF004976 12 286 3.5E-69 T 17-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 BJD13_17825 8ffe3b2c843cbda3c8da233564ad986b 305 SUPERFAMILY SSF52402 40 268 8.38E-54 T 17-10-2018 BJD13_17825 8ffe3b2c843cbda3c8da233564ad986b 305 Hamap MF_01850 tRNA-cytidine(32) 2-sulfurtransferase [ttcA]. 22 283 54.238 T 17-10-2018 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase GO:0008033 BJD13_07500 a602ca267e925f0f3e3d19fb21d44d97 159 Gene3D G3DSA:3.40.140.10 35 158 1.8E-41 T 17-10-2018 BJD13_07500 a602ca267e925f0f3e3d19fb21d44d97 159 SUPERFAMILY SSF102712 53 129 1.16E-6 T 17-10-2018 BJD13_07500 a602ca267e925f0f3e3d19fb21d44d97 159 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 108 113 - T 17-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site BJD13_07500 a602ca267e925f0f3e3d19fb21d44d97 159 Pfam PF04002 RadC-like JAB domain 38 157 3.9E-42 T 17-10-2018 IPR025657 RadC-like JAB domain BJD13_07500 a602ca267e925f0f3e3d19fb21d44d97 159 TIGRFAM TIGR00608 radc: DNA repair protein RadC 24 158 3.2E-43 T 17-10-2018 IPR001405 Uncharacterised protein family UPF0758 BJD13_09770 e9e3f6adf5e6619186a90433b6d53fea 372 SUPERFAMILY SSF51395 13 370 2.32E-120 T 17-10-2018 BJD13_09770 e9e3f6adf5e6619186a90433b6d53fea 372 Gene3D G3DSA:3.20.20.70 15 372 4.5E-140 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD13_09770 e9e3f6adf5e6619186a90433b6d53fea 372 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 17 348 5.7E-84 T 17-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 BJD13_04990 c0236da80e49be8afbbd84d9ab1ab637 111 Gene3D G3DSA:3.10.450.50 1 107 6.7E-26 T 17-10-2018 BJD13_04990 c0236da80e49be8afbbd84d9ab1ab637 111 Pfam PF12680 SnoaL-like domain 10 96 7.3E-7 T 17-10-2018 IPR037401 SnoaL-like domain BJD13_04990 c0236da80e49be8afbbd84d9ab1ab637 111 SUPERFAMILY SSF54427 9 104 2.3E-13 T 17-10-2018 IPR032710 NTF2-like domain superfamily BJD13_03110 30306237fc40a4a76a50c16fa73c2774 266 Pfam PF00106 short chain dehydrogenase 8 189 2.0E-37 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_03110 30306237fc40a4a76a50c16fa73c2774 266 Gene3D G3DSA:3.40.50.720 7 259 3.0E-55 T 17-10-2018 BJD13_03110 30306237fc40a4a76a50c16fa73c2774 266 PIRSF PIRSF000126 1 265 2.7E-53 T 17-10-2018 BJD13_03110 30306237fc40a4a76a50c16fa73c2774 266 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 191 7.5E-4 T 17-10-2018 BJD13_03110 30306237fc40a4a76a50c16fa73c2774 266 SUPERFAMILY SSF51735 7 257 4.53E-55 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_03110 30306237fc40a4a76a50c16fa73c2774 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 2.8E-8 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_03110 30306237fc40a4a76a50c16fa73c2774 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 2.8E-8 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_03110 30306237fc40a4a76a50c16fa73c2774 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 2.8E-8 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_03110 30306237fc40a4a76a50c16fa73c2774 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.1E-20 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_03110 30306237fc40a4a76a50c16fa73c2774 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 2.1E-20 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_03110 30306237fc40a4a76a50c16fa73c2774 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.1E-20 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_03110 30306237fc40a4a76a50c16fa73c2774 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.1E-20 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_03110 30306237fc40a4a76a50c16fa73c2774 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 2.1E-20 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_22395 b041d0c07b28d6d2a1c23f9b142a7473 943 PIRSF PIRSF035905 559 706 6.4 T 17-10-2018 IPR014600 Uncharacterised conserved protein UCP035905, membrane protein BJD13_22395 b041d0c07b28d6d2a1c23f9b142a7473 943 PIRSF PIRSF035905 596 932 5.4E-8 T 17-10-2018 IPR014600 Uncharacterised conserved protein UCP035905, membrane protein BJD13_22395 b041d0c07b28d6d2a1c23f9b142a7473 943 PIRSF PIRSF035905 2 559 2.4E-64 T 17-10-2018 IPR014600 Uncharacterised conserved protein UCP035905, membrane protein BJD13_22395 b041d0c07b28d6d2a1c23f9b142a7473 943 Pfam PF10101 Predicted membrane protein (DUF2339) 182 922 1.7E-140 T 17-10-2018 IPR019286 Protein of unknown function DUF2339, transmembrane BJD13_20585 3744f4438e7daa4fb93f25f2d16de60f 308 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 50 270 2.3E-54 T 17-10-2018 IPR018713 Domain of unknown function DUF2236 BJD13_06765 61a289b346bc59eeb57e0b63f469e9b0 360 Pfam PF03235 Protein of unknown function DUF262 13 95 5.6E-14 T 17-10-2018 IPR004919 Domain of unknown function DUF262 BJD13_01720 fa04d043fb4e8506704a1b757239515f 466 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 6 435 1.3E-148 T 17-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 BJD13_01720 fa04d043fb4e8506704a1b757239515f 466 PIRSF PIRSF006446 1 457 2.6E-181 T 17-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 BJD13_04940 b65537edec619cc7dab50ae5a06b5644 635 Pfam PF02719 Polysaccharide biosynthesis protein 287 569 1.3E-111 T 17-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain BJD13_04940 b65537edec619cc7dab50ae5a06b5644 635 SUPERFAMILY SSF53335 112 332 6.31E-12 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_04940 b65537edec619cc7dab50ae5a06b5644 635 Pfam PF13727 CoA-binding domain 68 242 1.0E-13 T 17-10-2018 BJD13_04940 b65537edec619cc7dab50ae5a06b5644 635 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 285 454 0.002 T 17-10-2018 BJD13_04940 b65537edec619cc7dab50ae5a06b5644 635 Gene3D G3DSA:3.40.50.720 282 610 1.6E-106 T 17-10-2018 BJD13_04940 b65537edec619cc7dab50ae5a06b5644 635 Gene3D G3DSA:3.40.50.720 144 268 8.1E-29 T 17-10-2018 BJD13_04940 b65537edec619cc7dab50ae5a06b5644 635 SUPERFAMILY SSF51735 285 555 1.06E-57 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_04495 235d2a876153031b7891187b72f9c34b 277 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 82 95 - T 17-10-2018 IPR020583 Inositol monophosphatase, metal-binding site BJD13_04495 235d2a876153031b7891187b72f9c34b 277 Gene3D G3DSA:3.30.540.10 1 141 1.8E-46 T 17-10-2018 BJD13_04495 235d2a876153031b7891187b72f9c34b 277 PRINTS PR00377 Inositol monophosphatase superfamily signature 178 199 1.5E-55 T 17-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BJD13_04495 235d2a876153031b7891187b72f9c34b 277 PRINTS PR00377 Inositol monophosphatase superfamily signature 61 77 1.5E-55 T 17-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BJD13_04495 235d2a876153031b7891187b72f9c34b 277 PRINTS PR00377 Inositol monophosphatase superfamily signature 39 59 1.5E-55 T 17-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BJD13_04495 235d2a876153031b7891187b72f9c34b 277 PRINTS PR00377 Inositol monophosphatase superfamily signature 209 233 1.5E-55 T 17-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BJD13_04495 235d2a876153031b7891187b72f9c34b 277 PRINTS PR00377 Inositol monophosphatase superfamily signature 131 154 1.5E-55 T 17-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BJD13_04495 235d2a876153031b7891187b72f9c34b 277 PRINTS PR00377 Inositol monophosphatase superfamily signature 82 98 1.5E-55 T 17-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BJD13_04495 235d2a876153031b7891187b72f9c34b 277 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 212 226 - T 17-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 BJD13_04495 235d2a876153031b7891187b72f9c34b 277 PRINTS PR01959 SuhB family inositol monophosphatase signature 105 124 1.1E-20 T 17-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 BJD13_04495 235d2a876153031b7891187b72f9c34b 277 PRINTS PR01959 SuhB family inositol monophosphatase signature 18 40 1.1E-20 T 17-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 BJD13_04495 235d2a876153031b7891187b72f9c34b 277 PRINTS PR01959 SuhB family inositol monophosphatase signature 199 211 1.1E-20 T 17-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 BJD13_04495 235d2a876153031b7891187b72f9c34b 277 PRINTS PR01959 SuhB family inositol monophosphatase signature 157 183 1.1E-20 T 17-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 BJD13_04495 235d2a876153031b7891187b72f9c34b 277 SUPERFAMILY SSF56655 5 264 1.44E-77 T 17-10-2018 BJD13_04495 235d2a876153031b7891187b72f9c34b 277 Gene3D G3DSA:3.40.190.80 143 268 2.6E-35 T 17-10-2018 BJD13_04495 235d2a876153031b7891187b72f9c34b 277 Pfam PF00459 Inositol monophosphatase family 4 253 9.8E-64 T 17-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BJD13_02055 1cadfab27bffdcc6166ff14a53649ec1 188 SUPERFAMILY SSF143456 6 188 9.94E-63 T 17-10-2018 BJD13_02055 1cadfab27bffdcc6166ff14a53649ec1 188 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 6 188 37.593 T 17-10-2018 IPR003774 Protein of unknown function UPF0301 BJD13_02055 1cadfab27bffdcc6166ff14a53649ec1 188 Gene3D G3DSA:3.40.1740.10 5 188 1.7E-64 T 17-10-2018 BJD13_02055 1cadfab27bffdcc6166ff14a53649ec1 188 Pfam PF02622 Uncharacterized ACR, COG1678 17 175 7.9E-48 T 17-10-2018 IPR003774 Protein of unknown function UPF0301 BJD13_00095 cb2a9fb0d8a46bc01392435820e8955a 407 SUPERFAMILY SSF81901 281 387 1.15E-24 T 17-10-2018 BJD13_00095 cb2a9fb0d8a46bc01392435820e8955a 407 Pfam PF08238 Sel1 repeat 349 384 1.1E-5 T 17-10-2018 IPR006597 Sel1-like repeat BJD13_00095 cb2a9fb0d8a46bc01392435820e8955a 407 Pfam PF08238 Sel1 repeat 295 312 140.0 T 17-10-2018 IPR006597 Sel1-like repeat BJD13_00095 cb2a9fb0d8a46bc01392435820e8955a 407 Pfam PF08238 Sel1 repeat 315 348 2.7E-5 T 17-10-2018 IPR006597 Sel1-like repeat BJD13_00095 cb2a9fb0d8a46bc01392435820e8955a 407 Gene3D G3DSA:1.25.40.10 8 161 2.9E-6 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_00095 cb2a9fb0d8a46bc01392435820e8955a 407 SMART SM00671 349 384 2.1E-5 T 17-10-2018 IPR006597 Sel1-like repeat BJD13_00095 cb2a9fb0d8a46bc01392435820e8955a 407 SMART SM00671 281 312 120.0 T 17-10-2018 IPR006597 Sel1-like repeat BJD13_00095 cb2a9fb0d8a46bc01392435820e8955a 407 SMART SM00671 313 348 2.0E-7 T 17-10-2018 IPR006597 Sel1-like repeat BJD13_00095 cb2a9fb0d8a46bc01392435820e8955a 407 Gene3D G3DSA:1.25.40.10 231 405 2.0E-28 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_23590 8941a9adf211496ea26f3fda62f2ee33 111 SUPERFAMILY SSF103481 11 109 1.96E-6 T 17-10-2018 BJD13_23590 8941a9adf211496ea26f3fda62f2ee33 111 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 5 109 24.948 T 17-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 BJD13_23590 8941a9adf211496ea26f3fda62f2ee33 111 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 7 109 3.2E-41 T 17-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 BJD13_04895 216c0f660ba93522f87b9c7f3f3df606 344 Gene3D G3DSA:3.75.10.10 2 344 3.6E-116 T 17-10-2018 BJD13_04895 216c0f660ba93522f87b9c7f3f3df606 344 SUPERFAMILY SSF55909 2 339 6.71E-112 T 17-10-2018 BJD13_04895 216c0f660ba93522f87b9c7f3f3df606 344 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 6 338 7.3E-108 T 17-10-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 BJD13_18650 cb7e9f1ff3f7901a4c92a51045c95d0a 599 Gene3D G3DSA:1.50.10.10 219 597 8.5E-87 T 17-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 BJD13_18650 cb7e9f1ff3f7901a4c92a51045c95d0a 599 SUPERFAMILY SSF48208 190 590 1.44E-102 T 17-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 BJD13_18650 cb7e9f1ff3f7901a4c92a51045c95d0a 599 Pfam PF00723 Glycosyl hydrolases family 15 224 532 7.1E-51 T 17-10-2018 IPR011613 GH15-like domain Reactome: R-HSA-70221 BJD13_09435 0c46c8960c0c301bae3fcda38847d79b 783 Gene3D G3DSA:2.60.40.3110 233 320 8.2E-8 T 17-10-2018 BJD13_09435 0c46c8960c0c301bae3fcda38847d79b 783 Pfam PF13953 PapC C-terminal domain 702 762 6.6E-12 T 17-10-2018 IPR025949 PapC-like, C-terminal domain BJD13_09435 0c46c8960c0c301bae3fcda38847d79b 783 Pfam PF00577 Outer membrane usher protein 196 362 4.6E-11 T 17-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 BJD13_09435 0c46c8960c0c301bae3fcda38847d79b 783 Pfam PF00577 Outer membrane usher protein 463 692 9.7E-17 T 17-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 BJD13_09435 0c46c8960c0c301bae3fcda38847d79b 783 Gene3D G3DSA:2.60.40.2610 605 696 2.3E-12 T 17-10-2018 BJD13_16225 fa84ec031a8f7ee560cff175d9c68fb4 251 SUPERFAMILY SSF51735 5 250 9.59E-76 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_16225 fa84ec031a8f7ee560cff175d9c68fb4 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 17-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BJD13_16225 fa84ec031a8f7ee560cff175d9c68fb4 251 TIGRFAM TIGR01832 kduD: 2-deoxy-D-gluconate 3-dehydrogenase 5 251 3.0E-124 T 17-10-2018 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase GO:0008678|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.127|MetaCyc: PWY-6507|MetaCyc: PWY-7562 BJD13_16225 fa84ec031a8f7ee560cff175d9c68fb4 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 2.1E-13 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_16225 fa84ec031a8f7ee560cff175d9c68fb4 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 2.1E-13 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_16225 fa84ec031a8f7ee560cff175d9c68fb4 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 2.1E-13 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_16225 fa84ec031a8f7ee560cff175d9c68fb4 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 248 1.2E-56 T 17-10-2018 BJD13_16225 fa84ec031a8f7ee560cff175d9c68fb4 251 Gene3D G3DSA:3.40.50.720 1 251 2.8E-77 T 17-10-2018 BJD13_16225 fa84ec031a8f7ee560cff175d9c68fb4 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 8.4E-41 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_16225 fa84ec031a8f7ee560cff175d9c68fb4 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 8.4E-41 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_16225 fa84ec031a8f7ee560cff175d9c68fb4 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 8.4E-41 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_16225 fa84ec031a8f7ee560cff175d9c68fb4 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 8.4E-41 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_16225 fa84ec031a8f7ee560cff175d9c68fb4 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 8.4E-41 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_16225 fa84ec031a8f7ee560cff175d9c68fb4 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 8.4E-41 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_16365 3e14fbcf2addc2031674ffc611e8a237 926 Pfam PF07715 TonB-dependent Receptor Plug Domain 66 174 8.8E-11 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_16365 3e14fbcf2addc2031674ffc611e8a237 926 Gene3D G3DSA:2.170.130.10 35 180 1.3E-13 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_16365 3e14fbcf2addc2031674ffc611e8a237 926 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 43 926 5.0E-251 T 17-10-2018 IPR010104 Bacterial TonB-dependent receptor BJD13_16365 3e14fbcf2addc2031674ffc611e8a237 926 Pfam PF00593 TonB dependent receptor 426 925 3.7E-37 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_16365 3e14fbcf2addc2031674ffc611e8a237 926 SUPERFAMILY SSF56935 31 926 8.4E-96 T 17-10-2018 BJD13_16365 3e14fbcf2addc2031674ffc611e8a237 926 Gene3D G3DSA:2.40.170.20 238 926 1.2E-54 T 17-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BJD13_23435 308180226e069c0fa85ecd4b16992082 158 SUPERFAMILY SSF50341 5 112 7.46E-13 T 17-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 BJD13_23435 308180226e069c0fa85ecd4b16992082 158 SMART SM00260 6 146 0.0051 T 17-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BJD13_23435 308180226e069c0fa85ecd4b16992082 158 Gene3D G3DSA:2.30.30.40 14 109 2.4E-7 T 17-10-2018 BJD13_23435 308180226e069c0fa85ecd4b16992082 158 Pfam PF01584 CheW-like domain 11 145 2.2E-14 T 17-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BJD13_23435 308180226e069c0fa85ecd4b16992082 158 Gene3D G3DSA:2.40.50.180 29 100 2.4E-7 T 17-10-2018 BJD13_14690 7a038ac68040793792fddc85d7eb3caf 307 Pfam PF00106 short chain dehydrogenase 45 223 2.5E-50 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_14690 7a038ac68040793792fddc85d7eb3caf 307 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 222 1.4E-28 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_14690 7a038ac68040793792fddc85d7eb3caf 307 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 111 122 1.4E-28 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_14690 7a038ac68040793792fddc85d7eb3caf 307 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 174 1.4E-28 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_14690 7a038ac68040793792fddc85d7eb3caf 307 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 45 62 1.4E-28 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_14690 7a038ac68040793792fddc85d7eb3caf 307 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 203 1.4E-28 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_14690 7a038ac68040793792fddc85d7eb3caf 307 Gene3D G3DSA:3.40.50.720 40 291 1.6E-64 T 17-10-2018 BJD13_14690 7a038ac68040793792fddc85d7eb3caf 307 SUPERFAMILY SSF51735 43 295 1.05E-61 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_14690 7a038ac68040793792fddc85d7eb3caf 307 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 44 218 0.0077 T 17-10-2018 BJD13_14690 7a038ac68040793792fddc85d7eb3caf 307 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 184 203 3.5E-12 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_14690 7a038ac68040793792fddc85d7eb3caf 307 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 172 3.5E-12 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_14690 7a038ac68040793792fddc85d7eb3caf 307 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 111 122 3.5E-12 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_08220 350a5f151a572e801211c4b5fc009d90 252 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 49 66 5.6E-51 T 17-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD13_08220 350a5f151a572e801211c4b5fc009d90 252 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 160 186 5.6E-51 T 17-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD13_08220 350a5f151a572e801211c4b5fc009d90 252 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 66 86 5.6E-51 T 17-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD13_08220 350a5f151a572e801211c4b5fc009d90 252 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 125 145 5.6E-51 T 17-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD13_08220 350a5f151a572e801211c4b5fc009d90 252 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 208 232 5.6E-51 T 17-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD13_08220 350a5f151a572e801211c4b5fc009d90 252 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 104 124 5.6E-51 T 17-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD13_08220 350a5f151a572e801211c4b5fc009d90 252 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 49 230 2.1E-73 T 17-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 BJD13_08220 350a5f151a572e801211c4b5fc009d90 252 Pfam PF01578 Cytochrome C assembly protein 46 188 4.9E-28 T 17-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 BJD13_00425 1014408382f3cb59e3fdf7761ecbfbf6 379 SUPERFAMILY SSF57783 39 116 2.21E-7 T 17-10-2018 BJD13_00425 1014408382f3cb59e3fdf7761ecbfbf6 379 Pfam PF08273 Zinc-binding domain of primase-helicase 54 89 5.6E-6 T 17-10-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 BJD13_00425 1014408382f3cb59e3fdf7761ecbfbf6 379 Pfam PF13362 Toprim domain 260 357 2.8E-18 T 17-10-2018 IPR006171 TOPRIM domain BJD13_07775 10b1e162b5b19202addc7d7caf61415d 292 Gene3D G3DSA:3.30.420.310 70 289 1.5E-73 T 17-10-2018 BJD13_07775 10b1e162b5b19202addc7d7caf61415d 292 Pfam PF05035 2-keto-3-deoxy-galactonokinase 5 284 5.9E-96 T 17-10-2018 IPR007729 2-keto-3-deoxy-galactonokinase GO:0008671|GO:0034194 KEGG: 00052+2.7.1.58|MetaCyc: PWY-7130 BJD13_07775 10b1e162b5b19202addc7d7caf61415d 292 Gene3D G3DSA:3.30.420.300 1 69 7.7E-18 T 17-10-2018 BJD13_05795 ef5f2036cb0cda5e87c839c4c79f73aa 200 SUPERFAMILY SSF52172 2 124 5.12E-30 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_05795 ef5f2036cb0cda5e87c839c4c79f73aa 200 SMART SM00421 135 192 8.8E-25 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_05795 ef5f2036cb0cda5e87c839c4c79f73aa 200 Pfam PF00072 Response regulator receiver domain 2 111 2.9E-24 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_05795 ef5f2036cb0cda5e87c839c4c79f73aa 200 SMART SM00448 1 111 7.7E-23 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_05795 ef5f2036cb0cda5e87c839c4c79f73aa 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 138 152 1.0E-13 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_05795 ef5f2036cb0cda5e87c839c4c79f73aa 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 180 1.0E-13 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_05795 ef5f2036cb0cda5e87c839c4c79f73aa 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 168 1.0E-13 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_05795 ef5f2036cb0cda5e87c839c4c79f73aa 200 SUPERFAMILY SSF46894 130 198 6.46E-21 T 17-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BJD13_05795 ef5f2036cb0cda5e87c839c4c79f73aa 200 ProSitePatterns PS00622 LuxR-type HTH domain signature. 152 179 - T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_05795 ef5f2036cb0cda5e87c839c4c79f73aa 200 Pfam PF00196 Bacterial regulatory proteins, luxR family 137 192 5.0E-20 T 17-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BJD13_05795 ef5f2036cb0cda5e87c839c4c79f73aa 200 Gene3D G3DSA:3.40.50.12740 1 198 9.3E-63 T 17-10-2018 BJD13_13225 2eab7ce831fb4551708f300557d3baca 272 Pfam PF13180 PDZ domain 216 269 4.8E-8 T 17-10-2018 IPR001478 PDZ domain GO:0005515 BJD13_13225 2eab7ce831fb4551708f300557d3baca 272 Gene3D G3DSA:2.30.42.10 179 269 9.8E-16 T 17-10-2018 BJD13_13225 2eab7ce831fb4551708f300557d3baca 272 Gene3D G3DSA:2.30.30.830 75 143 2.6E-6 T 17-10-2018 BJD13_13225 2eab7ce831fb4551708f300557d3baca 272 Pfam PF11356 Type II secretion system protein C 74 139 1.0E-7 T 17-10-2018 IPR024961 Type II secretion system protein C, N-terminal BJD13_13225 2eab7ce831fb4551708f300557d3baca 272 SUPERFAMILY SSF50156 203 268 6.05E-12 T 17-10-2018 IPR036034 PDZ superfamily GO:0005515 BJD13_17830 1e720e11f5ab52ddc4924ba3538a7eff 301 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 300 40.234 T 17-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 BJD13_17830 1e720e11f5ab52ddc4924ba3538a7eff 301 Pfam PF04381 Putative exonuclease, RdgC 1 296 1.3E-98 T 17-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 BJD13_01115 a83024bd0bb815df89a9ace358f7893c 97 Gene3D G3DSA:3.30.2310.20 2 95 9.2E-12 T 17-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily BJD13_01115 a83024bd0bb815df89a9ace358f7893c 97 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 95 1.5E-16 T 17-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family BJD13_13205 b1592611b428be3cb71c27fb15fa3967 154 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 20 153 4.4E-55 T 17-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 BJD13_13205 b1592611b428be3cb71c27fb15fa3967 154 Pfam PF08334 Type II secretion system (T2SS), protein G 44 153 1.8E-41 T 17-10-2018 IPR013545 Type II secretion system protein G BJD13_13205 b1592611b428be3cb71c27fb15fa3967 154 SUPERFAMILY SSF54523 48 153 7.85E-37 T 17-10-2018 BJD13_13205 b1592611b428be3cb71c27fb15fa3967 154 Pfam PF07963 Prokaryotic N-terminal methylation motif 17 42 5.1E-10 T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD13_13205 b1592611b428be3cb71c27fb15fa3967 154 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 20 40 - T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD13_13205 b1592611b428be3cb71c27fb15fa3967 154 PRINTS PR00813 Bacterial general secretion pathway protein G signature 21 46 6.2E-18 T 17-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 BJD13_13205 b1592611b428be3cb71c27fb15fa3967 154 PRINTS PR00813 Bacterial general secretion pathway protein G signature 57 75 6.2E-18 T 17-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 BJD13_13205 b1592611b428be3cb71c27fb15fa3967 154 Gene3D G3DSA:3.30.700.10 44 153 3.1E-38 T 17-10-2018 BJD13_13205 b1592611b428be3cb71c27fb15fa3967 154 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 20 42 4.4E-8 T 17-10-2018 IPR012902 Prokaryotic N-terminal methylation site BJD13_00045 ea2104ea2a57eaa6a4564d12117e2d62 266 Pfam PF14460 Prokaryotic E2 family D 80 245 3.1E-25 T 17-10-2018 IPR032787 Prokaryotic E2 family D BJD13_00045 ea2104ea2a57eaa6a4564d12117e2d62 266 TIGRFAM TIGR03737 PRTRC_B: PRTRC system protein B 23 257 1.6E-41 T 17-10-2018 IPR022280 ParB-related, ThiF-related cassette, protein B BJD13_15640 409af8fd7d02403d55d7669ce8ca2ec5 291 Pfam PF00892 EamA-like transporter family 3 132 2.1E-6 T 17-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BJD13_15640 409af8fd7d02403d55d7669ce8ca2ec5 291 SUPERFAMILY SSF103481 37 137 2.62E-6 T 17-10-2018 BJD13_23695 f8cd3165947593fd816ca89ea7820fbc 301 Gene3D G3DSA:2.70.70.10 150 283 8.7E-33 T 17-10-2018 IPR011055 Duplicated hybrid motif BJD13_23695 f8cd3165947593fd816ca89ea7820fbc 301 Pfam PF01551 Peptidase family M23 176 275 4.3E-24 T 17-10-2018 IPR016047 Peptidase M23 BJD13_23695 f8cd3165947593fd816ca89ea7820fbc 301 SUPERFAMILY SSF51261 154 276 4.39E-30 T 17-10-2018 IPR011055 Duplicated hybrid motif BJD13_12560 435df6dea96b02c23bbce26b07cf99d3 305 Gene3D G3DSA:3.60.130.10 23 305 4.9E-89 T 17-10-2018 BJD13_12560 435df6dea96b02c23bbce26b07cf99d3 305 SUPERFAMILY SSF51197 26 305 3.53E-88 T 17-10-2018 BJD13_12560 435df6dea96b02c23bbce26b07cf99d3 305 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 32 298 5.9E-67 T 17-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 BJD13_06790 38602d527dde51c0617fdeca806e915f 260 SUPERFAMILY SSF52540 1 250 3.29E-50 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_06790 38602d527dde51c0617fdeca806e915f 260 Pfam PF13614 AAA domain 1 172 5.4E-38 T 17-10-2018 IPR025669 AAA domain BJD13_06790 38602d527dde51c0617fdeca806e915f 260 Gene3D G3DSA:3.40.50.300 1 257 2.9E-58 T 17-10-2018 BJD13_16415 678cb41edeaadb80414675561c97ab63 188 Pfam PF04191 Phospholipid methyltransferase 73 170 3.7E-21 T 17-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 BJD13_16415 678cb41edeaadb80414675561c97ab63 188 Gene3D G3DSA:1.20.120.1630 2 187 1.9E-38 T 17-10-2018 BJD13_11730 15e7ec6a96dac953ad72dfe0022abf6c 153 Pfam PF07486 Cell Wall Hydrolase 35 142 3.6E-17 T 17-10-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 BJD13_11730 15e7ec6a96dac953ad72dfe0022abf6c 153 Gene3D G3DSA:1.10.10.2520 17 96 4.5E-14 T 17-10-2018 BJD13_09265 28a344bf6cf4833293efe5ae80a17d9f 626 ProSitePatterns PS00211 ABC transporters family signature. 523 537 - T 17-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BJD13_09265 28a344bf6cf4833293efe5ae80a17d9f 626 SUPERFAMILY SSF52540 371 621 5.12E-75 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_09265 28a344bf6cf4833293efe5ae80a17d9f 626 Pfam PF00005 ABC transporter 398 551 8.0E-35 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD13_09265 28a344bf6cf4833293efe5ae80a17d9f 626 Gene3D G3DSA:3.40.50.300 371 624 1.8E-80 T 17-10-2018 BJD13_09265 28a344bf6cf4833293efe5ae80a17d9f 626 SMART SM00382 406 597 7.1E-19 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_09265 28a344bf6cf4833293efe5ae80a17d9f 626 SUPERFAMILY SSF90123 31 343 6.15E-27 T 17-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BJD13_09265 28a344bf6cf4833293efe5ae80a17d9f 626 Gene3D G3DSA:1.20.1560.10 16 364 6.8E-18 T 17-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BJD13_22470 513f1863a89f88efbea3e0e7c83841d1 145 Pfam PF11162 Protein of unknown function (DUF2946) 14 142 2.9E-7 T 17-10-2018 IPR021333 Protein of unknown function DUF2946 BJD13_21885 c093666a42cc2db5b7fdd4964cf3e1c2 85 Pfam PF13710 ACT domain 12 73 1.2E-18 T 17-10-2018 BJD13_21885 c093666a42cc2db5b7fdd4964cf3e1c2 85 SUPERFAMILY SSF55021 1 75 3.66E-6 T 17-10-2018 BJD13_05245 b3cd85528fa3590fa6a4629858d9e913 153 Pfam PF00034 Cytochrome c 68 139 7.2E-7 T 17-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BJD13_05245 b3cd85528fa3590fa6a4629858d9e913 153 SUPERFAMILY SSF46626 74 142 1.43E-19 T 17-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BJD13_05245 b3cd85528fa3590fa6a4629858d9e913 153 Gene3D G3DSA:1.10.760.10 67 143 3.1E-23 T 17-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BJD13_06415 16e438fc5ef473c7f3a569b1a5249522 221 Pfam PF03963 Flagellar hook capping protein - N-terminal region 15 75 2.0E-22 T 17-10-2018 IPR005648 Flagellar hook capping protein BJD13_06415 16e438fc5ef473c7f3a569b1a5249522 221 Pfam PF13860 FlgD Ig-like domain 104 177 4.0E-20 T 17-10-2018 IPR025965 FlgD Ig-like domain BJD13_06415 16e438fc5ef473c7f3a569b1a5249522 221 Gene3D G3DSA:2.30.30.910 185 221 2.2E-19 T 17-10-2018 BJD13_06415 16e438fc5ef473c7f3a569b1a5249522 221 Pfam PF13861 FlgD Tudor-like domain 84 217 1.6E-14 T 17-10-2018 IPR025963 FlgD Tudor-like domain BJD13_06415 16e438fc5ef473c7f3a569b1a5249522 221 Gene3D G3DSA:2.60.40.4070 101 184 1.3E-30 T 17-10-2018 BJD13_19920 988efba895a56567abf5db6ec94c1b02 378 Pfam PF01476 LysM domain 32 77 2.3E-14 T 17-10-2018 IPR018392 LysM domain BJD13_19920 988efba895a56567abf5db6ec94c1b02 378 Gene3D G3DSA:3.10.350.10 30 77 6.2E-16 T 17-10-2018 IPR036779 LysM domain superfamily BJD13_19920 988efba895a56567abf5db6ec94c1b02 378 SMART SM00257 31 79 1.7E-6 T 17-10-2018 IPR018392 LysM domain BJD13_19920 988efba895a56567abf5db6ec94c1b02 378 SUPERFAMILY SSF54106 30 78 1.11E-7 T 17-10-2018 BJD13_16905 7c057a98072a3f041fb69ce13ba68923 121 Pfam PF07045 Domain of unknown function (DUF1330) 35 106 4.0E-7 T 17-10-2018 IPR010753 Domain of unknown function DUF1330 BJD13_16905 7c057a98072a3f041fb69ce13ba68923 121 Gene3D G3DSA:3.30.70.100 1 119 4.4E-27 T 17-10-2018 BJD13_16905 7c057a98072a3f041fb69ce13ba68923 121 SUPERFAMILY SSF54909 34 103 1.2E-11 T 17-10-2018 IPR011008 Dimeric alpha-beta barrel BJD13_13565 7991e13583b91a5d23cda952e0fd7824 697 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 555 575 6.4E-43 T 17-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 BJD13_13565 7991e13583b91a5d23cda952e0fd7824 697 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 609 624 6.4E-43 T 17-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 BJD13_13565 7991e13583b91a5d23cda952e0fd7824 697 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 628 650 6.4E-43 T 17-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 BJD13_13565 7991e13583b91a5d23cda952e0fd7824 697 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 470 488 6.4E-43 T 17-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 BJD13_13565 7991e13583b91a5d23cda952e0fd7824 697 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 497 521 6.4E-43 T 17-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 BJD13_13565 7991e13583b91a5d23cda952e0fd7824 697 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 525 544 6.4E-43 T 17-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 BJD13_13565 7991e13583b91a5d23cda952e0fd7824 697 Pfam PF00326 Prolyl oligopeptidase family 494 695 1.4E-48 T 17-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 BJD13_13565 7991e13583b91a5d23cda952e0fd7824 697 SUPERFAMILY SSF50993 27 434 8.63E-58 T 17-10-2018 BJD13_13565 7991e13583b91a5d23cda952e0fd7824 697 Gene3D G3DSA:3.40.50.1820 28 657 2.9E-133 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_13565 7991e13583b91a5d23cda952e0fd7824 697 SUPERFAMILY SSF53474 440 695 3.27E-53 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_13565 7991e13583b91a5d23cda952e0fd7824 697 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 26 414 9.8E-31 T 17-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 BJD13_13565 7991e13583b91a5d23cda952e0fd7824 697 Gene3D G3DSA:2.130.10.120 77 430 2.9E-133 T 17-10-2018 BJD13_05945 404313e370d40bdd16f100e42bd96f0d 277 Pfam PF07024 ImpE protein 145 264 2.0E-39 T 17-10-2018 IPR009211 Predicted virulence protein, SciE type BJD13_05945 404313e370d40bdd16f100e42bd96f0d 277 Gene3D G3DSA:1.25.40.10 9 93 5.7E-15 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_05945 404313e370d40bdd16f100e42bd96f0d 277 PIRSF PIRSF029288 1 271 7.8E-95 T 17-10-2018 IPR009211 Predicted virulence protein, SciE type BJD13_05945 404313e370d40bdd16f100e42bd96f0d 277 SUPERFAMILY SSF144059 10 269 1.44E-81 T 17-10-2018 BJD13_04950 97fb1e7c6e68934e7132386d59fedd1d 616 Gene3D G3DSA:3.40.50.720 404 563 8.4E-34 T 17-10-2018 BJD13_04950 97fb1e7c6e68934e7132386d59fedd1d 616 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 18 289 5.9E-78 T 17-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 BJD13_04950 97fb1e7c6e68934e7132386d59fedd1d 616 SUPERFAMILY SSF51735 405 533 6.73E-32 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_04950 97fb1e7c6e68934e7132386d59fedd1d 616 Pfam PF02254 TrkA-N domain 406 519 9.4E-21 T 17-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 BJD13_04950 97fb1e7c6e68934e7132386d59fedd1d 616 Pfam PF00999 Sodium/hydrogen exchanger family 14 378 1.4E-69 T 17-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 BJD13_04950 97fb1e7c6e68934e7132386d59fedd1d 616 Gene3D G3DSA:1.20.1530.20 6 386 2.2E-82 T 17-10-2018 IPR038770 Sodium/solute symporter superfamily BJD13_15935 862e082e88347630c55bea85c07f2e4f 198 SUPERFAMILY SSF56935 24 133 1.73E-9 T 17-10-2018 BJD13_15935 862e082e88347630c55bea85c07f2e4f 198 TIGRFAM TIGR04273 Y_sulf_Ax21: sulfation-dependent quorum factor, Ax21 family 6 198 8.7E-97 T 17-10-2018 IPR026364 Ax21 family BJD13_15935 862e082e88347630c55bea85c07f2e4f 198 Gene3D G3DSA:2.40.160.10 13 197 8.9E-10 T 17-10-2018 IPR023614 Porin domain superfamily BJD13_18005 88dcbb8843eea3ba67af3268b7eda6ed 460 Gene3D G3DSA:1.20.1250.20 26 433 2.7E-25 T 17-10-2018 BJD13_18005 88dcbb8843eea3ba67af3268b7eda6ed 460 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 19 452 1.9E-118 T 17-10-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 BJD13_18005 88dcbb8843eea3ba67af3268b7eda6ed 460 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 70 95 - T 17-10-2018 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 BJD13_18005 88dcbb8843eea3ba67af3268b7eda6ed 460 SUPERFAMILY SSF103473 15 434 2.35E-35 T 17-10-2018 IPR036259 MFS transporter superfamily BJD13_18005 88dcbb8843eea3ba67af3268b7eda6ed 460 Pfam PF13347 MFS/sugar transport protein 21 439 1.5E-97 T 17-10-2018 BJD13_18815 1805b7a86592bbfe6ac366a4325a7413 233 Pfam PF07277 SapC 7 223 7.8E-66 T 17-10-2018 IPR010836 SapC BJD13_10805 24db7bab72c72cfdd936c83a214c0ca9 209 Gene3D G3DSA:2.60.120.590 8 197 4.7E-41 T 17-10-2018 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily BJD13_10805 24db7bab72c72cfdd936c83a214c0ca9 209 SUPERFAMILY SSF51197 7 189 9.2E-42 T 17-10-2018 BJD13_10805 24db7bab72c72cfdd936c83a214c0ca9 209 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 78 188 3.2E-14 T 17-10-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like BJD13_16580 2585ad66487253b2025fe1fd1664dc04 109 SUPERFAMILY SSF52833 18 103 3.53E-18 T 17-10-2018 IPR036249 Thioredoxin-like superfamily BJD13_16580 2585ad66487253b2025fe1fd1664dc04 109 Pfam PF00085 Thioredoxin 15 103 1.0E-12 T 17-10-2018 IPR013766 Thioredoxin domain GO:0045454 BJD13_16580 2585ad66487253b2025fe1fd1664dc04 109 Gene3D G3DSA:3.40.30.10 4 108 1.6E-18 T 17-10-2018 BJD13_09240 4639b59ddadf034b6d25b76290ccf497 377 Gene3D G3DSA:2.40.230.10 114 377 2.2E-90 T 17-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 BJD13_09240 4639b59ddadf034b6d25b76290ccf497 377 SUPERFAMILY SSF56931 112 377 1.31E-91 T 17-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 BJD13_09240 4639b59ddadf034b6d25b76290ccf497 377 PRINTS PR01486 Bacterial phospholipase A1 protein signature 185 201 5.6E-36 T 17-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 BJD13_09240 4639b59ddadf034b6d25b76290ccf497 377 PRINTS PR01486 Bacterial phospholipase A1 protein signature 208 227 5.6E-36 T 17-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 BJD13_09240 4639b59ddadf034b6d25b76290ccf497 377 PRINTS PR01486 Bacterial phospholipase A1 protein signature 163 180 5.6E-36 T 17-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 BJD13_09240 4639b59ddadf034b6d25b76290ccf497 377 PRINTS PR01486 Bacterial phospholipase A1 protein signature 238 252 5.6E-36 T 17-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 BJD13_09240 4639b59ddadf034b6d25b76290ccf497 377 PRINTS PR01486 Bacterial phospholipase A1 protein signature 346 366 5.6E-36 T 17-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 BJD13_09240 4639b59ddadf034b6d25b76290ccf497 377 PRINTS PR01486 Bacterial phospholipase A1 protein signature 324 341 5.6E-36 T 17-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 BJD13_09240 4639b59ddadf034b6d25b76290ccf497 377 PRINTS PR01486 Bacterial phospholipase A1 protein signature 253 271 5.6E-36 T 17-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 BJD13_09240 4639b59ddadf034b6d25b76290ccf497 377 PRINTS PR01486 Bacterial phospholipase A1 protein signature 288 306 5.6E-36 T 17-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 BJD13_09240 4639b59ddadf034b6d25b76290ccf497 377 Pfam PF02253 Phospholipase A1 111 373 4.0E-106 T 17-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 BJD13_11405 8babd7043f050aa84f3f2cfbd17c5bb3 117 Pfam PF06412 Conjugal transfer protein TraD 52 108 6.7E-13 T 17-10-2018 IPR009444 Conjugal transfer, TraD, alpha-type GO:0000746 BJD13_05170 38c8d15a30477e8128ff7fe9ef183bbd 409 Pfam PF09712 Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E) 12 300 1.7E-81 T 17-10-2018 IPR010123 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaE subunit BJD13_05170 38c8d15a30477e8128ff7fe9ef183bbd 409 TIGRFAM TIGR01834 PHA_synth_III_E: poly(R)-hydroxyalkanoic acid synthase, class III, PhaE subunit 11 312 1.0E-119 T 17-10-2018 IPR010123 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaE subunit BJD13_13600 f5ee0aeb1ce5715dd3b9cdeb599474b3 266 Pfam PF04338 Protein of unknown function, DUF481 47 265 1.2E-61 T 17-10-2018 IPR007433 Protein of unknown function DUF481 BJD13_00055 647fac79f0236eab92fee06b3740e50f 256 Pfam PF00899 ThiF family 16 89 1.6E-11 T 17-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 BJD13_00055 647fac79f0236eab92fee06b3740e50f 256 SUPERFAMILY SSF69572 17 120 1.57E-13 T 17-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 BJD13_00055 647fac79f0236eab92fee06b3740e50f 256 Gene3D G3DSA:3.40.50.720 15 240 7.8E-18 T 17-10-2018 BJD13_00055 647fac79f0236eab92fee06b3740e50f 256 TIGRFAM TIGR03736 PRTRC_ThiF: PRTRC system ThiF family protein 5 239 1.2E-65 T 17-10-2018 IPR022500 ParB-related, ThiF-related cassette, ThiF BJD13_20990 f617fbd10d29afb8249591e3f3e9d26a 621 Gene3D G3DSA:1.10.101.10 414 495 3.2E-22 T 17-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 BJD13_20990 f617fbd10d29afb8249591e3f3e9d26a 621 SUPERFAMILY SSF53955 2 78 2.11E-9 T 17-10-2018 IPR023346 Lysozyme-like domain superfamily BJD13_20990 f617fbd10d29afb8249591e3f3e9d26a 621 Gene3D G3DSA:1.10.530.10 1 179 1.0E-13 T 17-10-2018 BJD13_20990 f617fbd10d29afb8249591e3f3e9d26a 621 SUPERFAMILY SSF47090 421 491 2.88E-18 T 17-10-2018 IPR036365 PGBD-like superfamily BJD13_20990 f617fbd10d29afb8249591e3f3e9d26a 621 Pfam PF01471 Putative peptidoglycan binding domain 429 490 9.1E-18 T 17-10-2018 IPR002477 Peptidoglycan binding-like BJD13_19085 9105b008af5de0cd1ab5c427d07b1ec9 386 Pfam PF12704 MacB-like periplasmic core domain 23 229 7.5E-8 T 17-10-2018 IPR025857 MacB-like periplasmic core domain BJD13_19085 9105b008af5de0cd1ab5c427d07b1ec9 386 Pfam PF02687 FtsX-like permease family 290 375 4.0E-8 T 17-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 BJD13_15225 3dc04b5614ecd01665a1af493c2f54bb 453 SUPERFAMILY SSF51445 58 418 1.84E-45 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily BJD13_15225 3dc04b5614ecd01665a1af493c2f54bb 453 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 89 411 3.0E-23 T 17-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 BJD13_05450 d7f4f692eae2a52163382c45f84dc1ac 381 Pfam PF04860 Phage portal protein 42 372 3.0E-99 T 17-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein BJD13_05450 d7f4f692eae2a52163382c45f84dc1ac 381 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 33 377 6.6E-81 T 17-10-2018 IPR006427 Phage portal protein, HK97 BJD13_06410 ee552c2926ca788cd6889b265f58fc35 135 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 6 135 9.4E-44 T 17-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 BJD13_06410 ee552c2926ca788cd6889b265f58fc35 135 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 17-10-2018 IPR019776 Flagellar basal body rod protein, conserved site BJD13_06410 ee552c2926ca788cd6889b265f58fc35 135 Pfam PF00460 Flagella basal body rod protein 7 36 7.6E-9 T 17-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 BJD13_06410 ee552c2926ca788cd6889b265f58fc35 135 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 88 131 5.2E-10 T 17-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BJD13_09745 75d992973dd1824abb883eb197fe169e 201 PIRSF PIRSF035170 5 201 4.7E-73 T 17-10-2018 IPR009218 Predicted HD phosphohydrolase BJD13_09745 75d992973dd1824abb883eb197fe169e 201 SUPERFAMILY SSF109604 18 196 1.05E-13 T 17-10-2018 BJD13_09745 75d992973dd1824abb883eb197fe169e 201 Gene3D G3DSA:1.10.3210.10 11 153 4.0E-6 T 17-10-2018 BJD13_13635 861d47ca9c19e1b4f8249d2173c05cc6 549 SUPERFAMILY SSF52025 129 217 4.32E-8 T 17-10-2018 BJD13_13635 861d47ca9c19e1b4f8249d2173c05cc6 549 Gene3D G3DSA:3.40.630.10 242 527 3.0E-49 T 17-10-2018 BJD13_13635 861d47ca9c19e1b4f8249d2173c05cc6 549 SUPERFAMILY SSF53187 22 526 9.66E-62 T 17-10-2018 BJD13_13635 861d47ca9c19e1b4f8249d2173c05cc6 549 Pfam PF02225 PA domain 130 218 2.8E-7 T 17-10-2018 IPR003137 PA domain BJD13_13635 861d47ca9c19e1b4f8249d2173c05cc6 549 Pfam PF04389 Peptidase family M28 298 508 5.6E-49 T 17-10-2018 IPR007484 Peptidase M28 BJD13_23495 e3f0e327b5e3f14139dca96f4f473b2e 109 Pfam PF11747 Killing trait 11 77 1.2E-25 T 17-10-2018 IPR021070 Killing trait, RebB BJD13_16805 e46b2b140529bbe33dfcd1cecfa2900b 126 Gene3D G3DSA:3.30.10.10 60 125 2.1E-22 T 17-10-2018 BJD13_16805 e46b2b140529bbe33dfcd1cecfa2900b 126 Pfam PF11720 Peptidase inhibitor I78 family 62 126 3.3E-23 T 17-10-2018 IPR021719 Proteinase inhibitor I78 BJD13_18525 b5c207fd7ba37d4886585417cee72e41 786 SUPERFAMILY SSF82171 45 528 2.35E-37 T 17-10-2018 BJD13_18525 b5c207fd7ba37d4886585417cee72e41 786 Gene3D G3DSA:2.140.10.30 20 163 9.3E-6 T 17-10-2018 IPR038554 Dipeptidylpeptidase IV, N-terminal domain superfamily BJD13_18525 b5c207fd7ba37d4886585417cee72e41 786 Gene3D G3DSA:2.140.10.30 227 525 1.3E-25 T 17-10-2018 IPR038554 Dipeptidylpeptidase IV, N-terminal domain superfamily BJD13_18525 b5c207fd7ba37d4886585417cee72e41 786 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 336 497 3.6E-15 T 17-10-2018 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 BJD13_18525 b5c207fd7ba37d4886585417cee72e41 786 SUPERFAMILY SSF53474 529 784 4.65E-61 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_18525 b5c207fd7ba37d4886585417cee72e41 786 Gene3D G3DSA:3.40.50.1820 535 785 8.6E-63 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_18525 b5c207fd7ba37d4886585417cee72e41 786 Pfam PF00326 Prolyl oligopeptidase family 589 785 1.4E-41 T 17-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 BJD13_08620 58b45534ee2a079e883d1a5ee6e9bf46 183 Pfam PF11159 Protein of unknown function (DUF2939) 13 104 4.5E-25 T 17-10-2018 IPR021330 Protein of unknown function DUF2939 BJD13_10835 0f2940d1fbd7b668f229ed023a8173c7 492 Pfam PF17189 Glycosyl hydrolase family 30 beta sandwich domain 428 488 1.7E-14 T 17-10-2018 IPR033452 Glycosyl hydrolase family 30, beta sandwich domain Reactome: R-HSA-1660662|Reactome: R-HSA-390471 BJD13_10835 0f2940d1fbd7b668f229ed023a8173c7 492 Gene3D G3DSA:2.60.40.1180 39 489 1.9E-138 T 17-10-2018 IPR013780 Glycosyl hydrolase, all-beta BJD13_10835 0f2940d1fbd7b668f229ed023a8173c7 492 PRINTS PR00843 Glycosyl hydrolase family 30 signature 76 96 5.1E-16 T 17-10-2018 IPR001139 Glycoside hydrolase family 30 GO:0004348|GO:0006665 Reactome: R-HSA-1660662|Reactome: R-HSA-390471 BJD13_10835 0f2940d1fbd7b668f229ed023a8173c7 492 PRINTS PR00843 Glycosyl hydrolase family 30 signature 112 138 5.1E-16 T 17-10-2018 IPR001139 Glycoside hydrolase family 30 GO:0004348|GO:0006665 Reactome: R-HSA-1660662|Reactome: R-HSA-390471 BJD13_10835 0f2940d1fbd7b668f229ed023a8173c7 492 PRINTS PR00843 Glycosyl hydrolase family 30 signature 206 223 5.1E-16 T 17-10-2018 IPR001139 Glycoside hydrolase family 30 GO:0004348|GO:0006665 Reactome: R-HSA-1660662|Reactome: R-HSA-390471 BJD13_10835 0f2940d1fbd7b668f229ed023a8173c7 492 PRINTS PR00843 Glycosyl hydrolase family 30 signature 275 297 5.1E-16 T 17-10-2018 IPR001139 Glycoside hydrolase family 30 GO:0004348|GO:0006665 Reactome: R-HSA-1660662|Reactome: R-HSA-390471 BJD13_10835 0f2940d1fbd7b668f229ed023a8173c7 492 SUPERFAMILY SSF51445 87 429 9.53E-80 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily BJD13_10835 0f2940d1fbd7b668f229ed023a8173c7 492 Pfam PF02055 Glycosyl hydrolase family 30 TIM-barrel domain 87 425 9.6E-72 T 17-10-2018 IPR033453 Glycosyl hydrolase family 30, TIM-barrel domain Reactome: R-HSA-1660662|Reactome: R-HSA-390471 BJD13_10835 0f2940d1fbd7b668f229ed023a8173c7 492 Gene3D G3DSA:3.20.20.80 37 429 1.9E-138 T 17-10-2018 BJD13_14445 92b4253eb08a7896fbd2568dc114c461 217 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 17 217 30.37 T 17-10-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 BJD13_14445 92b4253eb08a7896fbd2568dc114c461 217 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 57 215 1.3E-39 T 17-10-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 BJD13_14445 92b4253eb08a7896fbd2568dc114c461 217 SUPERFAMILY SSF47240 56 190 1.22E-17 T 17-10-2018 IPR009078 Ferritin-like superfamily BJD13_14445 92b4253eb08a7896fbd2568dc114c461 217 Gene3D G3DSA:1.20.1260.10 57 212 1.6E-6 T 17-10-2018 IPR012347 Ferritin-like BJD13_12115 b7f21b485a96c887b2a73c1ae21ecaeb 198 SUPERFAMILY SSF52218 1 195 4.59E-57 T 17-10-2018 IPR029039 Flavoprotein-like superfamily BJD13_12115 b7f21b485a96c887b2a73c1ae21ecaeb 198 Pfam PF03358 NADPH-dependent FMN reductase 52 129 1.5E-9 T 17-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 BJD13_12115 b7f21b485a96c887b2a73c1ae21ecaeb 198 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 3 195 2.8E-48 T 17-10-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 BJD13_12115 b7f21b485a96c887b2a73c1ae21ecaeb 198 Gene3D G3DSA:3.40.50.360 1 197 2.5E-62 T 17-10-2018 IPR029039 Flavoprotein-like superfamily BJD13_13820 775d27c606ca759e591da97d985e9137 259 SUPERFAMILY SSF117892 53 188 1.14E-9 T 17-10-2018 IPR036013 Band 7/SPFH domain superfamily BJD13_13820 775d27c606ca759e591da97d985e9137 259 Gene3D G3DSA:3.30.479.30 52 186 5.1E-6 T 17-10-2018 BJD13_13820 775d27c606ca759e591da97d985e9137 259 Pfam PF01145 SPFH domain / Band 7 family 19 204 5.6E-18 T 17-10-2018 IPR001107 Band 7 domain BJD13_10970 34be11caa45ac179686a8d9c5f42b1a8 186 SUPERFAMILY SSF47240 37 181 9.76E-40 T 17-10-2018 IPR009078 Ferritin-like superfamily BJD13_10970 34be11caa45ac179686a8d9c5f42b1a8 186 Pfam PF00210 Ferritin-like domain 44 181 1.2E-28 T 17-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 BJD13_10970 34be11caa45ac179686a8d9c5f42b1a8 186 Gene3D G3DSA:1.20.1260.10 28 183 3.1E-55 T 17-10-2018 IPR012347 Ferritin-like BJD13_10970 34be11caa45ac179686a8d9c5f42b1a8 186 PIRSF PIRSF018063 19 186 6.4E-67 T 17-10-2018 IPR014490 DNA-binding protein from starved cells-like BJD13_08360 20e0525e95dd56e8f6919a90887ec7d7 218 Pfam PF01794 Ferric reductase like transmembrane component 53 167 3.7E-18 T 17-10-2018 IPR013130 Ferric reductase transmembrane component-like domain BJD13_08360 20e0525e95dd56e8f6919a90887ec7d7 218 Hamap MF_01207 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ [msrQ]. 6 206 22.378 T 17-10-2018 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 BJD13_07540 c6f75751a6d444ea6806f8c4e36d0a26 255 Pfam PF08241 Methyltransferase domain 46 138 6.1E-15 T 17-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 BJD13_07540 c6f75751a6d444ea6806f8c4e36d0a26 255 Gene3D G3DSA:3.40.50.150 8 216 8.4E-32 T 17-10-2018 BJD13_07540 c6f75751a6d444ea6806f8c4e36d0a26 255 SUPERFAMILY SSF53335 13 180 2.5E-28 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_01630 22e21d9ecdc84c40bc34f5efce56eac4 350 SUPERFAMILY SSF51197 39 339 1.13E-55 T 17-10-2018 BJD13_01630 22e21d9ecdc84c40bc34f5efce56eac4 350 Gene3D G3DSA:2.60.120.1660 15 276 3.0E-47 T 17-10-2018 BJD13_01630 22e21d9ecdc84c40bc34f5efce56eac4 350 SMART SM00558 126 285 8.4E-5 T 17-10-2018 IPR003347 JmjC domain BJD13_01630 22e21d9ecdc84c40bc34f5efce56eac4 350 Pfam PF13621 Cupin-like domain 37 273 1.2E-56 T 17-10-2018 BJD13_02425 5392b2a9166b553c0c3883baac9ccc9d 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 7.9E-17 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_02425 5392b2a9166b553c0c3883baac9ccc9d 304 Gene3D G3DSA:1.10.10.10 3 89 3.5E-22 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_02425 5392b2a9166b553c0c3883baac9ccc9d 304 SUPERFAMILY SSF53850 90 298 2.33E-50 T 17-10-2018 BJD13_02425 5392b2a9166b553c0c3883baac9ccc9d 304 Pfam PF03466 LysR substrate binding domain 90 294 1.4E-48 T 17-10-2018 IPR005119 LysR, substrate-binding BJD13_02425 5392b2a9166b553c0c3883baac9ccc9d 304 SUPERFAMILY SSF46785 3 112 2.31E-22 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_02425 5392b2a9166b553c0c3883baac9ccc9d 304 Gene3D G3DSA:3.40.190.290 91 293 3.7E-70 T 17-10-2018 BJD13_02765 02b020641438482bc64e71aee1ff8711 190 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 184 4.4E-47 T 17-10-2018 IPR003697 Maf-like protein GO:0047429 BJD13_02765 02b020641438482bc64e71aee1ff8711 190 Hamap MF_00528 Septum formation protein Maf [maf]. 1 190 28.988 T 17-10-2018 IPR003697 Maf-like protein GO:0047429 BJD13_02765 02b020641438482bc64e71aee1ff8711 190 Pfam PF02545 Maf-like protein 2 186 9.4E-52 T 17-10-2018 IPR003697 Maf-like protein GO:0047429 BJD13_02765 02b020641438482bc64e71aee1ff8711 190 PIRSF PIRSF006305 1 190 5.4E-47 T 17-10-2018 IPR003697 Maf-like protein GO:0047429 BJD13_02765 02b020641438482bc64e71aee1ff8711 190 SUPERFAMILY SSF52972 1 185 1.5E-57 T 17-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like BJD13_02765 02b020641438482bc64e71aee1ff8711 190 Gene3D G3DSA:3.90.950.10 1 190 1.9E-62 T 17-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like BJD13_12060 39d6e05437b3f275b053355d5adca89b 562 SMART SM00028 517 550 1.5 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD13_12060 39d6e05437b3f275b053355d5adca89b 562 SMART SM00028 449 483 140.0 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD13_12060 39d6e05437b3f275b053355d5adca89b 562 SMART SM00028 415 448 6.8 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD13_12060 39d6e05437b3f275b053355d5adca89b 562 SMART SM00028 381 414 240.0 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD13_12060 39d6e05437b3f275b053355d5adca89b 562 SMART SM00028 177 210 91.0 T 17-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BJD13_12060 39d6e05437b3f275b053355d5adca89b 562 SUPERFAMILY SSF48452 383 551 2.94E-26 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_12060 39d6e05437b3f275b053355d5adca89b 562 Pfam PF13429 Tetratricopeptide repeat 276 539 5.5E-8 T 17-10-2018 BJD13_12060 39d6e05437b3f275b053355d5adca89b 562 Gene3D G3DSA:1.25.40.10 379 559 2.2E-27 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_12060 39d6e05437b3f275b053355d5adca89b 562 SUPERFAMILY SSF48452 174 367 5.94E-13 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_16050 048cb5e03105dd985473ff0b6423f028 271 Gene3D G3DSA:2.40.128.270 50 171 1.2E-12 T 17-10-2018 IPR038670 HslJ-like superfamily BJD13_16050 048cb5e03105dd985473ff0b6423f028 271 Pfam PF14302 Domain of unknown function (DUF4377) 188 268 1.0E-14 T 17-10-2018 IPR025485 Domain of unknown function DUF4377 BJD13_16050 048cb5e03105dd985473ff0b6423f028 271 Pfam PF03724 META domain 51 166 8.2E-15 T 17-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ BJD13_04350 14d1be7793d578cf68f18c1f7bc958f4 609 Gene3D G3DSA:3.90.1580.10 328 608 3.6E-70 T 17-10-2018 BJD13_04350 14d1be7793d578cf68f18c1f7bc958f4 609 SUPERFAMILY SSF56436 333 608 4.24E-66 T 17-10-2018 IPR016187 C-type lectin fold BJD13_04350 14d1be7793d578cf68f18c1f7bc958f4 609 Pfam PF03781 Sulfatase-modifying factor enzyme 1 334 607 3.7E-67 T 17-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 BJD13_00995 691f33443bb1d52dd3c6c7bbf9c15fa6 295 Pfam PF04381 Putative exonuclease, RdgC 1 289 2.7E-73 T 17-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 BJD13_08815 0ade85c4bffe52883b5af37fbf6a11a3 393 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 133 228 2.8E-26 T 17-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 BJD13_08815 0ade85c4bffe52883b5af37fbf6a11a3 393 SUPERFAMILY SSF47203 240 391 1.53E-57 T 17-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 BJD13_08815 0ade85c4bffe52883b5af37fbf6a11a3 393 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 17 128 3.5E-30 T 17-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 BJD13_08815 0ade85c4bffe52883b5af37fbf6a11a3 393 Gene3D G3DSA:2.40.110.10 132 245 8.6E-38 T 17-10-2018 BJD13_08815 0ade85c4bffe52883b5af37fbf6a11a3 393 SUPERFAMILY SSF56645 11 253 1.44E-73 T 17-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 BJD13_08815 0ade85c4bffe52883b5af37fbf6a11a3 393 Gene3D G3DSA:1.10.540.10 7 131 1.0E-37 T 17-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 BJD13_08815 0ade85c4bffe52883b5af37fbf6a11a3 393 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 135 147 - T 17-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 BJD13_08815 0ade85c4bffe52883b5af37fbf6a11a3 393 Gene3D G3DSA:1.20.140.10 246 388 2.2E-53 T 17-10-2018 BJD13_08815 0ade85c4bffe52883b5af37fbf6a11a3 393 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 241 388 4.3E-49 T 17-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 BJD13_08815 0ade85c4bffe52883b5af37fbf6a11a3 393 PIRSF PIRSF016578 137 207 0.01 T 17-10-2018 BJD13_08815 0ade85c4bffe52883b5af37fbf6a11a3 393 PIRSF PIRSF016578 15 126 9.1E-8 T 17-10-2018 BJD13_08815 0ade85c4bffe52883b5af37fbf6a11a3 393 PIRSF PIRSF016578 226 380 3.6E-11 T 17-10-2018 BJD13_08815 0ade85c4bffe52883b5af37fbf6a11a3 393 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 348 367 - T 17-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 BJD13_19565 16da80d1851538313c0b5409d5d36912 348 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 26 335 9.5E-97 T 17-10-2018 IPR016833 Putative sodium bile acid cotransporter BJD13_19565 16da80d1851538313c0b5409d5d36912 348 PIRSF PIRSF026166 14 348 1.3E-132 T 17-10-2018 IPR016833 Putative sodium bile acid cotransporter BJD13_19565 16da80d1851538313c0b5409d5d36912 348 Gene3D G3DSA:1.20.1530.20 13 336 7.3E-38 T 17-10-2018 IPR038770 Sodium/solute symporter superfamily BJD13_19065 ffb64948daf9567d13569a1bc9b3b59e 298 SUPERFAMILY SSF103481 205 295 4.58E-15 T 17-10-2018 BJD13_19065 ffb64948daf9567d13569a1bc9b3b59e 298 SUPERFAMILY SSF103481 52 151 4.45E-10 T 17-10-2018 BJD13_19065 ffb64948daf9567d13569a1bc9b3b59e 298 Pfam PF00892 EamA-like transporter family 17 148 2.6E-11 T 17-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BJD13_19065 ffb64948daf9567d13569a1bc9b3b59e 298 Pfam PF00892 EamA-like transporter family 159 292 5.1E-18 T 17-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BJD13_23980 f7d823875cecc977a55a2cfb570766dd 251 PIRSF PIRSF003299 22 247 3.3E-60 T 17-10-2018 IPR026264 Type IV secretion system protein VirB8/PtlE GO:0030255 BJD13_23980 f7d823875cecc977a55a2cfb570766dd 251 SUPERFAMILY SSF54427 108 244 3.24E-45 T 17-10-2018 IPR032710 NTF2-like domain superfamily BJD13_23980 f7d823875cecc977a55a2cfb570766dd 251 Pfam PF04335 VirB8 protein 36 244 1.5E-56 T 17-10-2018 IPR007430 Bacterial virulence protein VirB8 GO:0016020 BJD13_23980 f7d823875cecc977a55a2cfb570766dd 251 Gene3D G3DSA:3.10.450.230 107 247 9.6E-57 T 17-10-2018 BJD13_16670 c47b38732c85ec4fd8d8cc66c0be3394 202 Gene3D G3DSA:3.40.50.360 1 194 3.1E-48 T 17-10-2018 IPR029039 Flavoprotein-like superfamily BJD13_16670 c47b38732c85ec4fd8d8cc66c0be3394 202 Pfam PF02525 Flavodoxin-like fold 1 170 5.3E-44 T 17-10-2018 IPR003680 Flavodoxin-like fold BJD13_16670 c47b38732c85ec4fd8d8cc66c0be3394 202 SUPERFAMILY SSF52218 1 194 6.45E-48 T 17-10-2018 IPR029039 Flavoprotein-like superfamily BJD13_04060 c83056e6ec551f308aed11afe18ed1a7 282 Gene3D G3DSA:1.20.5.340 163 282 3.8E-6 T 17-10-2018 BJD13_04060 c83056e6ec551f308aed11afe18ed1a7 282 SUPERFAMILY SSF109709 154 215 3.4E-5 T 17-10-2018 BJD13_07830 7ed9bd80f29cc83ab41251d48bdc3fe9 293 Pfam PF12146 Serine aminopeptidase, S33 28 163 3.3E-14 T 17-10-2018 IPR022742 Serine aminopeptidase, S33 BJD13_07830 7ed9bd80f29cc83ab41251d48bdc3fe9 293 Gene3D G3DSA:3.40.50.1820 3 279 1.0E-26 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_07830 7ed9bd80f29cc83ab41251d48bdc3fe9 293 PIRSF PIRSF037442 1 287 6.9E-73 T 17-10-2018 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 BJD13_07830 7ed9bd80f29cc83ab41251d48bdc3fe9 293 SUPERFAMILY SSF53474 12 278 5.59E-27 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_13995 3c928d829acd4a25543d254e0a8a3c59 441 Gene3D G3DSA:3.40.50.1820 4 234 4.4E-11 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_13995 3c928d829acd4a25543d254e0a8a3c59 441 Pfam PF01764 Lipase (class 3) 119 150 1.0E-5 T 17-10-2018 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 BJD13_13995 3c928d829acd4a25543d254e0a8a3c59 441 SUPERFAMILY SSF53474 37 184 8.2E-18 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_17325 c56eb34a3c8827c05cf1c486d89ad730 525 SUPERFAMILY SSF51126 341 524 1.75E-8 T 17-10-2018 IPR011050 Pectin lyase fold/virulence factor BJD13_17325 c56eb34a3c8827c05cf1c486d89ad730 525 SUPERFAMILY SSF51126 60 384 3.53E-20 T 17-10-2018 IPR011050 Pectin lyase fold/virulence factor BJD13_01985 b44873b0f8d9dc4762ceb691f025f5e5 198 Pfam PF07273 Protein of unknown function (DUF1439) 38 159 6.7E-8 T 17-10-2018 IPR010835 Protein of unknown function DUF1439 BJD13_01985 b44873b0f8d9dc4762ceb691f025f5e5 198 Gene3D G3DSA:3.15.10.40 29 188 7.8E-6 T 17-10-2018 BJD13_02465 68c73fdf4a2eb2c37708d4829233f1b5 687 Pfam PF07715 TonB-dependent Receptor Plug Domain 77 179 3.6E-20 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_02465 68c73fdf4a2eb2c37708d4829233f1b5 687 SUPERFAMILY SSF56935 61 687 6.41E-95 T 17-10-2018 BJD13_02465 68c73fdf4a2eb2c37708d4829233f1b5 687 Pfam PF00593 TonB dependent receptor 243 684 9.5E-42 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_02465 68c73fdf4a2eb2c37708d4829233f1b5 687 Gene3D G3DSA:2.170.130.10 71 188 2.9E-28 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_02465 68c73fdf4a2eb2c37708d4829233f1b5 687 Gene3D G3DSA:2.40.170.20 192 687 1.8E-57 T 17-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BJD13_02840 33d51f16495fe96353014535b31d8f2e 278 Gene3D G3DSA:3.40.50.150 78 245 5.7E-23 T 17-10-2018 BJD13_02840 33d51f16495fe96353014535b31d8f2e 278 SUPERFAMILY SSF53335 81 246 2.71E-23 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_02840 33d51f16495fe96353014535b31d8f2e 278 Pfam PF13649 Methyltransferase domain 94 186 9.0E-14 T 17-10-2018 BJD13_15420 bafbc0506889b47bd0b2b356c507bb54 372 SUPERFAMILY SSF51395 5 365 1.01E-109 T 17-10-2018 BJD13_15420 bafbc0506889b47bd0b2b356c507bb54 372 Gene3D G3DSA:3.20.20.70 8 360 3.0E-117 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD13_15420 bafbc0506889b47bd0b2b356c507bb54 372 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 10 344 1.7E-64 T 17-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 BJD13_04625 330c665f8cf800ad08dfe2a26bc179ae 145 Gene3D G3DSA:3.90.1010.10 11 145 4.8E-46 T 17-10-2018 BJD13_04625 330c665f8cf800ad08dfe2a26bc179ae 145 SUPERFAMILY SSF82649 15 143 2.41E-42 T 17-10-2018 BJD13_04625 330c665f8cf800ad08dfe2a26bc179ae 145 Pfam PF02657 Fe-S metabolism associated domain 21 138 9.0E-43 T 17-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like BJD13_06180 9aaa9289ada5a6961f3ec368ddef4ee1 192 Pfam PF13628 Domain of unknown function (DUF4142) 46 182 2.5E-26 T 17-10-2018 IPR025419 Domain of unknown function DUF4142 BJD13_06180 9aaa9289ada5a6961f3ec368ddef4ee1 192 Gene3D G3DSA:1.20.1260.10 61 175 3.5E-5 T 17-10-2018 IPR012347 Ferritin-like BJD13_14875 aee4d716535c8235d66aa86e214b07cf 209 Pfam PF09502 Bacterial type III secretion protein (HrpB4) 5 203 1.4E-39 T 17-10-2018 IPR013393 Type III secretion protein HrpB4 BJD13_14875 aee4d716535c8235d66aa86e214b07cf 209 TIGRFAM TIGR02560 HrpB4: type III secretion protein HrpB4 2 209 1.6E-74 T 17-10-2018 IPR013393 Type III secretion protein HrpB4 BJD13_01855 791bdd13211dbda56e73fb04fd9ade15 388 Pfam PF01594 AI-2E family transporter 18 348 5.9E-59 T 17-10-2018 IPR002549 Transmembrane protein TqsA-like BJD13_03975 96e95ceb69e09f6dabd286b4b64d3eee 213 Pfam PF07791 Protein of unknown function (DUF1629) 12 133 1.3E-53 T 17-10-2018 IPR012433 Protein of unknown function DUF1629 BJD13_21310 9efb29e8945e57caf34ce2240f949ebe 151 SUPERFAMILY SSF102220 110 143 8.76E-5 T 17-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BJD13_20260 a4d1501d3a66628626d783f2f9343bdc 135 Gene3D G3DSA:3.10.450.50 1 135 3.6E-30 T 17-10-2018 BJD13_20260 a4d1501d3a66628626d783f2f9343bdc 135 Pfam PF12680 SnoaL-like domain 13 119 2.9E-12 T 17-10-2018 IPR037401 SnoaL-like domain BJD13_20260 a4d1501d3a66628626d783f2f9343bdc 135 SUPERFAMILY SSF54427 1 132 6.97E-28 T 17-10-2018 IPR032710 NTF2-like domain superfamily BJD13_16060 ed9e2c121ba2de6272572b427e5b2b6b 203 Pfam PF01161 Phosphatidylethanolamine-binding protein 26 196 2.0E-37 T 17-10-2018 IPR008914 Phosphatidylethanolamine-binding protein BJD13_16060 ed9e2c121ba2de6272572b427e5b2b6b 203 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 28 195 3.1E-26 T 17-10-2018 IPR005247 YbhB/YbcL BJD13_16060 ed9e2c121ba2de6272572b427e5b2b6b 203 Gene3D G3DSA:3.90.280.10 1 197 1.1E-48 T 17-10-2018 IPR036610 PEBP-like superfamily BJD13_16060 ed9e2c121ba2de6272572b427e5b2b6b 203 SUPERFAMILY SSF49777 1 198 2.49E-42 T 17-10-2018 IPR036610 PEBP-like superfamily BJD13_18550 9884ebdc45d6ef67cd185429805fa430 89 SUPERFAMILY SSF47336 5 84 2.75E-12 T 17-10-2018 IPR036736 ACP-like superfamily BJD13_18550 9884ebdc45d6ef67cd185429805fa430 89 Pfam PF00550 Phosphopantetheine attachment site 10 65 9.9E-9 T 17-10-2018 IPR009081 Phosphopantetheine binding ACP domain BJD13_18550 9884ebdc45d6ef67cd185429805fa430 89 Gene3D G3DSA:1.10.1200.10 6 88 5.7E-18 T 17-10-2018 IPR036736 ACP-like superfamily BJD13_17085 aa959a4ac0482ba52fe66af088d13662 129 Pfam PF10947 Protein of unknown function (DUF2628) 11 112 1.5E-19 T 17-10-2018 IPR024399 Protein of unknown function DUF2628 BJD13_17085 aa959a4ac0482ba52fe66af088d13662 129 ProDom PD031864 YIGF SIMILAR ESCHERICHIA COLI MEMBRANE XCC4223 XAC4357 XAC2195 9 122 1.0E-40 T 17-10-2018 BJD13_23430 79c70db0e899c0694c58499f890de4f4 395 PIRSF PIRSF036592 1 395 1.6E-219 T 17-10-2018 IPR012071 Chemotaxis glutamate methyltransferase BJD13_23430 79c70db0e899c0694c58499f890de4f4 395 Gene3D G3DSA:3.40.50.180 221 391 1.6E-12 T 17-10-2018 IPR035909 Methylesterase CheB, C-terminal BJD13_23430 79c70db0e899c0694c58499f890de4f4 395 Pfam PF01339 CheB methylesterase 226 376 1.8E-11 T 17-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 BJD13_23430 79c70db0e899c0694c58499f890de4f4 395 SUPERFAMILY SSF52738 221 393 2.88E-22 T 17-10-2018 IPR035909 Methylesterase CheB, C-terminal BJD13_20135 407f7255a73bbe75e0ae4e029f4cbfd4 119 SUPERFAMILY SSF160719 9 99 6.02E-26 T 17-10-2018 BJD13_20135 407f7255a73bbe75e0ae4e029f4cbfd4 119 Pfam PF04965 Gene 25-like lysozyme 14 97 5.2E-13 T 17-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD BJD13_20135 407f7255a73bbe75e0ae4e029f4cbfd4 119 Gene3D G3DSA:3.10.450.40 2 119 6.6E-20 T 17-10-2018 BJD13_06470 1df1de0c7678e11a528a802756ffc21c 441 Pfam PF07196 Flagellin hook IN motif 124 177 4.9E-8 T 17-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 BJD13_06470 1df1de0c7678e11a528a802756ffc21c 441 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 214 429 9.3E-48 T 17-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 BJD13_06470 1df1de0c7678e11a528a802756ffc21c 441 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 10 107 3.1E-17 T 17-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 BJD13_17820 ddff00d1c9b31a51e1bee5f9f6efe393 445 PRINTS PR00688 Xylose isomerase signature 188 209 3.7E-79 T 17-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 BJD13_17820 ddff00d1c9b31a51e1bee5f9f6efe393 445 PRINTS PR00688 Xylose isomerase signature 141 161 3.7E-79 T 17-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 BJD13_17820 ddff00d1c9b31a51e1bee5f9f6efe393 445 PRINTS PR00688 Xylose isomerase signature 341 352 3.7E-79 T 17-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 BJD13_17820 ddff00d1c9b31a51e1bee5f9f6efe393 445 PRINTS PR00688 Xylose isomerase signature 164 183 3.7E-79 T 17-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 BJD13_17820 ddff00d1c9b31a51e1bee5f9f6efe393 445 PRINTS PR00688 Xylose isomerase signature 237 261 3.7E-79 T 17-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 BJD13_17820 ddff00d1c9b31a51e1bee5f9f6efe393 445 PRINTS PR00688 Xylose isomerase signature 279 306 3.7E-79 T 17-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 BJD13_17820 ddff00d1c9b31a51e1bee5f9f6efe393 445 PRINTS PR00688 Xylose isomerase signature 308 319 3.7E-79 T 17-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 BJD13_17820 ddff00d1c9b31a51e1bee5f9f6efe393 445 PRINTS PR00688 Xylose isomerase signature 215 234 3.7E-79 T 17-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 BJD13_17820 ddff00d1c9b31a51e1bee5f9f6efe393 445 PRINTS PR00688 Xylose isomerase signature 100 122 3.7E-79 T 17-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 BJD13_17820 ddff00d1c9b31a51e1bee5f9f6efe393 445 Gene3D G3DSA:3.20.20.150 10 445 1.4E-177 T 17-10-2018 BJD13_17820 ddff00d1c9b31a51e1bee5f9f6efe393 445 SUPERFAMILY SSF51658 11 443 1.07E-161 T 17-10-2018 IPR036237 Xylose isomerase-like superfamily BJD13_17820 ddff00d1c9b31a51e1bee5f9f6efe393 445 TIGRFAM TIGR02630 xylose_isom_A: xylose isomerase 12 443 1.6E-212 T 17-10-2018 IPR013452 Xylose isomerase, bacterial-type GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 BJD13_17820 ddff00d1c9b31a51e1bee5f9f6efe393 445 Hamap MF_00455 Xylose isomerase [xylA]. 19 443 53.605 T 17-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 BJD13_23730 244ea9fe9f8536e5d1d5efb212df89d1 79 Pfam PF05768 Glutaredoxin-like domain (DUF836) 3 72 3.5E-12 T 17-10-2018 IPR008554 Glutaredoxin-like BJD13_23730 244ea9fe9f8536e5d1d5efb212df89d1 79 Gene3D G3DSA:3.40.30.10 1 78 4.3E-24 T 17-10-2018 BJD13_23730 244ea9fe9f8536e5d1d5efb212df89d1 79 SUPERFAMILY SSF52833 3 74 4.03E-14 T 17-10-2018 IPR036249 Thioredoxin-like superfamily BJD13_10105 dd6485c8042fce97114290f1f896d7c7 481 Pfam PF12831 FAD dependent oxidoreductase 6 183 1.0E-8 T 17-10-2018 IPR039649 Digeranylgeranylglycerophospholipid reductase, N-terminal BJD13_10105 dd6485c8042fce97114290f1f896d7c7 481 Gene3D G3DSA:3.50.50.60 2 425 3.2E-25 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_10105 dd6485c8042fce97114290f1f896d7c7 481 SUPERFAMILY SSF51905 3 361 3.78E-27 T 17-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BJD13_04120 3522097e07d06d927936b1814b77430a 251 Gene3D G3DSA:3.40.50.880 3 251 6.9E-62 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD13_04120 3522097e07d06d927936b1814b77430a 251 Pfam PF07722 Peptidase C26 5 222 5.3E-69 T 17-10-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 BJD13_04120 3522097e07d06d927936b1814b77430a 251 SUPERFAMILY SSF52317 12 245 2.21E-36 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD13_14810 ef8470bbb59ab73ca1806713694f4e1e 113 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 7 101 7.6E-7 T 17-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 BJD13_14810 ef8470bbb59ab73ca1806713694f4e1e 113 SUPERFAMILY SSF69754 1 96 1.57E-9 T 17-10-2018 IPR036567 Ribosome hibernation promotion factor-like BJD13_14810 ef8470bbb59ab73ca1806713694f4e1e 113 Gene3D G3DSA:3.30.160.100 1 104 2.0E-7 T 17-10-2018 IPR036567 Ribosome hibernation promotion factor-like BJD13_16910 2e8ccea6c2320df1461c18d4634954e1 241 Pfam PF08279 HTH domain 6 59 1.3E-16 T 17-10-2018 IPR013196 Helix-turn-helix, type 11 BJD13_16910 2e8ccea6c2320df1461c18d4634954e1 241 Gene3D G3DSA:1.10.10.10 1 64 6.1E-17 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_16910 2e8ccea6c2320df1461c18d4634954e1 241 SUPERFAMILY SSF46785 1 62 2.61E-12 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_16910 2e8ccea6c2320df1461c18d4634954e1 241 Pfam PF13280 WYL domain 141 227 2.0E-13 T 17-10-2018 IPR026881 WYL domain BJD13_15900 296e0dfd160e82ff2768d690f7c10860 158 SUPERFAMILY SSF75217 8 156 5.1E-44 T 17-10-2018 IPR029028 Alpha/beta knot methyltransferases BJD13_15900 296e0dfd160e82ff2768d690f7c10860 158 Pfam PF00588 SpoU rRNA Methylase family 8 145 2.1E-32 T 17-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 BJD13_15900 296e0dfd160e82ff2768d690f7c10860 158 Gene3D G3DSA:3.40.1280.10 2 158 5.1E-62 T 17-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BJD13_15900 296e0dfd160e82ff2768d690f7c10860 158 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 6 155 32.67 T 17-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 BJD13_15900 296e0dfd160e82ff2768d690f7c10860 158 PIRSF PIRSF029256 5 158 1.9E-61 T 17-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 BJD13_16600 f788a326e7e8aafecd9aafb9616839a0 218 SUPERFAMILY SSF51735 1 205 8.35E-35 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_16600 f788a326e7e8aafecd9aafb9616839a0 218 Pfam PF13460 NAD(P)H-binding 8 194 1.6E-43 T 17-10-2018 IPR016040 NAD(P)-binding domain BJD13_16600 f788a326e7e8aafecd9aafb9616839a0 218 Gene3D G3DSA:3.40.50.720 3 218 5.3E-46 T 17-10-2018 BJD13_02070 86524706162425c9e2c5fda3d512340d 144 Gene3D G3DSA:3.30.300.20 1 141 6.3E-43 T 17-10-2018 IPR015946 K homology domain-like, alpha/beta BJD13_02070 86524706162425c9e2c5fda3d512340d 144 TIGRFAM TIGR03562 osmo_induc_OsmC: peroxiredoxin, OsmC subfamily 5 139 1.2E-57 T 17-10-2018 IPR019904 Peroxiredoxin OsmC GO:0004601|GO:0006979 KEGG: 00480+1.11.1.15 BJD13_02070 86524706162425c9e2c5fda3d512340d 144 Pfam PF02566 OsmC-like protein 42 138 6.0E-22 T 17-10-2018 IPR003718 OsmC/Ohr family BJD13_02070 86524706162425c9e2c5fda3d512340d 144 SUPERFAMILY SSF82784 2 140 3.27E-37 T 17-10-2018 IPR036102 OsmC/Ohr superfamily BJD13_12505 3b260f6935b4ac717d2e54d090331106 296 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 6 277 2.0E-75 T 17-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 BJD13_12505 3b260f6935b4ac717d2e54d090331106 296 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 6 280 19.658 T 17-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 BJD13_12505 3b260f6935b4ac717d2e54d090331106 296 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 9 274 6.4E-76 T 17-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 BJD13_12505 3b260f6935b4ac717d2e54d090331106 296 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 139 151 - T 17-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 BJD13_11270 ca4669384d4bf9ea2c33489c50db78bb 309 Pfam PF16162 Domain of unknown function (DUF4868) 108 293 1.8E-35 T 17-10-2018 IPR032359 Protein of unknown function DUF4868 BJD13_20080 6eb844039cdffe3270f87c0e6bcfec64 106 ProSitePatterns PS00028 Zinc finger C2H2 type domain signature. 11 32 - T 17-10-2018 IPR013087 Zinc finger C2H2-type GO:0003676 BJD13_20080 6eb844039cdffe3270f87c0e6bcfec64 106 Pfam PF04606 Ogr/Delta-like zinc finger 10 52 6.3E-6 T 17-10-2018 IPR007684 Zinc finger, Ogr/Delta-type BJD13_20310 d276c8775b2e938c7c5fcf7096eacace 76 Pfam PF07866 Protein of unknown function (DUF1653) 15 73 2.8E-25 T 17-10-2018 IPR023387 DUF1653-like domain BJD13_20310 d276c8775b2e938c7c5fcf7096eacace 76 Gene3D G3DSA:2.30.30.320 6 76 1.1E-23 T 17-10-2018 IPR037135 DUF1653-like domain superfamily BJD13_00670 1d6e348e876f6a4e80eb9eba91ddeef7 229 Pfam PF09676 Type IV conjugative transfer system lipoprotein (TraV) 33 184 1.7E-18 T 17-10-2018 IPR014118 Type IV conjugative transfer system protein TraV BJD13_08445 13294cfd992f4b5ea299f7bdf98304e5 228 Pfam PF11218 Protein of unknown function (DUF3011) 30 225 5.1E-89 T 17-10-2018 IPR021381 Protein of unknown function DUF3011 BJD13_04515 b1650c98ef38f63c06bb4a7ad4960143 342 PIRSF PIRSF004911 13 342 2.0E-105 T 17-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase BJD13_04515 b1650c98ef38f63c06bb4a7ad4960143 342 Gene3D G3DSA:3.20.20.70 57 341 8.8E-81 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD13_04515 b1650c98ef38f63c06bb4a7ad4960143 342 SUPERFAMILY SSF102114 114 332 9.29E-20 T 17-10-2018 BJD13_04515 b1650c98ef38f63c06bb4a7ad4960143 342 TIGRFAM TIGR00238 TIGR00238: KamA family protein 21 335 1.0E-87 T 17-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase BJD13_04515 b1650c98ef38f63c06bb4a7ad4960143 342 Pfam PF13394 4Fe-4S single cluster domain 122 191 6.5E-5 T 17-10-2018 BJD13_04515 b1650c98ef38f63c06bb4a7ad4960143 342 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 22 341 4.1E-135 T 17-10-2018 IPR022462 Lysine-2,3-aminomutase-like BJD13_20235 919a34b7f2925e4d3c94dbf458ce0e03 340 Pfam PF04860 Phage portal protein 91 314 5.6E-10 T 17-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein BJD13_20235 919a34b7f2925e4d3c94dbf458ce0e03 340 TIGRFAM TIGR01540 portal_PBSX: phage portal protein, PBSX family 49 327 2.0E-65 T 17-10-2018 IPR006430 Phage portal protein PBSX family BJD13_20235 919a34b7f2925e4d3c94dbf458ce0e03 340 PIRSF PIRSF018494 3 340 1.9E-143 T 17-10-2018 IPR030935 Phage portal protein PBSX family, Proteobacteria BJD13_13740 25179fd4ee616a250a723c75c4d857a1 304 Gene3D G3DSA:3.40.50.150 140 299 6.3E-12 T 17-10-2018 BJD13_13740 25179fd4ee616a250a723c75c4d857a1 304 SUPERFAMILY SSF53335 93 288 1.75E-23 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_01020 7a35365be7dfa17453dc394ce5a546b2 327 Gene3D G3DSA:2.30.42.10 61 159 1.4E-13 T 17-10-2018 BJD13_01020 7a35365be7dfa17453dc394ce5a546b2 327 Pfam PF13180 PDZ domain 61 144 1.4E-8 T 17-10-2018 IPR001478 PDZ domain GO:0005515 BJD13_01020 7a35365be7dfa17453dc394ce5a546b2 327 SUPERFAMILY SSF50156 49 145 2.5E-11 T 17-10-2018 IPR036034 PDZ superfamily GO:0005515 BJD13_01020 7a35365be7dfa17453dc394ce5a546b2 327 SMART SM00228 58 136 0.0011 T 17-10-2018 IPR001478 PDZ domain GO:0005515 BJD13_02345 98bade347d592a5a71eca5cea0b42b6b 439 PIRSF PIRSF004548 1 439 1.5E-158 T 17-10-2018 IPR010364 Uncharacterised protein family, inner membrane CreD BJD13_02345 98bade347d592a5a71eca5cea0b42b6b 439 Pfam PF06123 Inner membrane protein CreD 6 432 9.6E-144 T 17-10-2018 IPR010364 Uncharacterised protein family, inner membrane CreD BJD13_15090 d4b7564493d767bd77e0a289268464e2 137 TIGRFAM TIGR02425 decarb_PcaC: 4-carboxymuconolactone decarboxylase 4 124 2.3E-60 T 17-10-2018 IPR012788 4-carboxymuconolactone decarboxylase KEGG: 00362+4.1.1.44 BJD13_15090 d4b7564493d767bd77e0a289268464e2 137 Pfam PF02627 Carboxymuconolactone decarboxylase family 36 118 5.0E-26 T 17-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 BJD13_15090 d4b7564493d767bd77e0a289268464e2 137 Gene3D G3DSA:1.20.1290.10 4 127 2.0E-39 T 17-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 BJD13_15090 d4b7564493d767bd77e0a289268464e2 137 SUPERFAMILY SSF69118 2 127 2.22E-38 T 17-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 BJD13_19940 05ad29d62385eebdd4db17e2ae6afd3e 573 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 63 223 1.5E-16 T 17-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like BJD13_19725 2b9a01f9f723ae1fb3b3efb4116f4cab 271 PIRSF PIRSF004750 1 271 3.5E-111 T 17-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 BJD13_19725 2b9a01f9f723ae1fb3b3efb4116f4cab 271 TIGRFAM TIGR03138 QueF: queuine synthase 4 271 7.1E-113 T 17-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 BJD13_19725 2b9a01f9f723ae1fb3b3efb4116f4cab 271 SUPERFAMILY SSF55620 173 253 2.45E-9 T 17-10-2018 BJD13_19725 2b9a01f9f723ae1fb3b3efb4116f4cab 271 Pfam PF14489 QueF-like protein 183 257 2.7E-27 T 17-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 BJD13_19725 2b9a01f9f723ae1fb3b3efb4116f4cab 271 Gene3D G3DSA:3.30.1130.10 132 271 1.7E-51 T 17-10-2018 BJD13_19725 2b9a01f9f723ae1fb3b3efb4116f4cab 271 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 271 134.343 T 17-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 BJD13_19725 2b9a01f9f723ae1fb3b3efb4116f4cab 271 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 15 123 7.3E-45 T 17-10-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 BJD13_19725 2b9a01f9f723ae1fb3b3efb4116f4cab 271 Gene3D G3DSA:3.30.1130.10 15 128 3.3E-41 T 17-10-2018 BJD13_10430 5ecf57c28963618419cf1629e9bfd840 170 Pfam PF09413 Putative prokaryotic signal transducing protein 1 75 2.2E-6 T 17-10-2018 IPR018551 Domain of unknown function DUF2007 BJD13_09360 bf247cc6dfcad8cb4453a3486c01424b 283 Pfam PF12833 Helix-turn-helix domain 193 269 3.5E-21 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD13_09360 bf247cc6dfcad8cb4453a3486c01424b 283 Gene3D G3DSA:1.10.10.60 170 272 3.5E-20 T 17-10-2018 BJD13_09360 bf247cc6dfcad8cb4453a3486c01424b 283 SUPERFAMILY SSF46689 223 269 1.54E-7 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_09360 bf247cc6dfcad8cb4453a3486c01424b 283 Pfam PF02311 AraC-like ligand binding domain 34 120 1.0E-8 T 17-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 BJD13_09360 bf247cc6dfcad8cb4453a3486c01424b 283 Gene3D G3DSA:2.60.120.10 41 96 5.0E-6 T 17-10-2018 IPR014710 RmlC-like jelly roll fold BJD13_09360 bf247cc6dfcad8cb4453a3486c01424b 283 SMART SM00342 186 268 9.0E-23 T 17-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BJD13_09360 bf247cc6dfcad8cb4453a3486c01424b 283 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 237 252 2.5E-5 T 17-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BJD13_09360 bf247cc6dfcad8cb4453a3486c01424b 283 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 252 268 2.5E-5 T 17-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BJD13_09360 bf247cc6dfcad8cb4453a3486c01424b 283 SUPERFAMILY SSF51182 43 200 1.2E-17 T 17-10-2018 IPR011051 RmlC-like cupin domain superfamily BJD13_17345 beb9c91fd44f4fcbc4d7dc581ad126ba 132 Pfam PF09722 Protein of unknown function (DUF2384) 83 110 2.2E-5 T 17-10-2018 IPR024467 Domain of unknown function DUF2384 BJD13_14350 7c75f81d4c1939a36d2619d4953d0fa5 114 Pfam PF04505 Interferon-induced transmembrane protein 20 90 3.3E-20 T 17-10-2018 IPR007593 CD225/Dispanin family GO:0016021 BJD13_00030 7bab71813d0b33fca502706c880fcddd 180 TIGRFAM TIGR03741 PRTRC_E: PRTRC system protein E 3 115 1.4E-10 T 17-10-2018 IPR022273 ParB-related, ThiF-related cassette, protein E BJD13_11585 b780becd2b0312b5b19ba8a9fbd3bc11 247 Gene3D G3DSA:3.60.21.10 1 244 1.7E-13 T 17-10-2018 IPR029052 Metallo-dependent phosphatase-like BJD13_11585 b780becd2b0312b5b19ba8a9fbd3bc11 247 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 239 6.9E-108 T 17-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 BJD13_11585 b780becd2b0312b5b19ba8a9fbd3bc11 247 Pfam PF00149 Calcineurin-like phosphoesterase 1 206 8.4E-9 T 17-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 BJD13_11585 b780becd2b0312b5b19ba8a9fbd3bc11 247 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 247 119.898 T 17-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 BJD13_11585 b780becd2b0312b5b19ba8a9fbd3bc11 247 SUPERFAMILY SSF56300 1 229 1.74E-32 T 17-10-2018 BJD13_08890 800dbce915357e64741449a9462b8c4f 120 Gene3D G3DSA:1.10.10.10 9 117 9.0E-24 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_08890 800dbce915357e64741449a9462b8c4f 120 SUPERFAMILY SSF46785 5 79 3.44E-19 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_08890 800dbce915357e64741449a9462b8c4f 120 SMART SM00345 16 75 6.2E-12 T 17-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD13_08890 800dbce915357e64741449a9462b8c4f 120 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 74 6.4E-14 T 17-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD13_19510 964921734970b206405fcd28313bdd4e 158 Pfam PF10003 Integral membrane protein (DUF2244) 18 150 2.3E-31 T 17-10-2018 IPR019253 Protein of unknown function DUF2244, transmembrane BJD13_14840 025e03d0d4c306578861e3cdc2b32485 419 Gene3D G3DSA:3.40.395.10 191 389 8.3E-78 T 17-10-2018 BJD13_14840 025e03d0d4c306578861e3cdc2b32485 419 SUPERFAMILY SSF54001 157 387 2.16E-29 T 17-10-2018 IPR038765 Papain-like cysteine peptidase superfamily BJD13_14840 025e03d0d4c306578861e3cdc2b32485 419 Pfam PF02902 Ulp1 protease family, C-terminal catalytic domain 212 387 7.6E-18 T 17-10-2018 IPR003653 Ulp1 protease family, C-terminal catalytic domain GO:0006508|GO:0008234 BJD13_13320 cd6ccf5b9383319d788a3823c29d0016 366 SUPERFAMILY SSF102114 56 262 4.71E-6 T 17-10-2018 BJD13_14960 156646f70c25e9994882f554dc3c42c5 806 Pfam PF05819 NolX protein 331 620 1.7E-154 T 17-10-2018 IPR008718 NolX GO:0009877 BJD13_14960 156646f70c25e9994882f554dc3c42c5 806 Pfam PF05819 NolX protein 37 268 1.8E-94 T 17-10-2018 IPR008718 NolX GO:0009877 BJD13_14960 156646f70c25e9994882f554dc3c42c5 806 Pfam PF05819 NolX protein 260 334 5.5E-28 T 17-10-2018 IPR008718 NolX GO:0009877 BJD13_16960 fcc140896839f21a02b140f6cdf644ed 268 Pfam PF01435 Peptidase family M48 60 246 7.4E-37 T 17-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 BJD13_20565 bc7bbfab9987169c048b694ec53c6764 258 SUPERFAMILY SSF52172 1 155 3.7E-33 T 17-10-2018 IPR011006 CheY-like superfamily BJD13_20565 bc7bbfab9987169c048b694ec53c6764 258 SMART SM00448 4 116 9.7E-26 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_20565 bc7bbfab9987169c048b694ec53c6764 258 SMART SM00850 162 258 2.1E-21 T 17-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 BJD13_20565 bc7bbfab9987169c048b694ec53c6764 258 Gene3D G3DSA:3.40.50.2300 1 128 2.0E-32 T 17-10-2018 BJD13_20565 bc7bbfab9987169c048b694ec53c6764 258 Pfam PF04397 LytTr DNA-binding domain 163 257 2.8E-20 T 17-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 BJD13_20565 bc7bbfab9987169c048b694ec53c6764 258 Pfam PF00072 Response regulator receiver domain 7 114 1.7E-23 T 17-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BJD13_20565 bc7bbfab9987169c048b694ec53c6764 258 Gene3D G3DSA:2.40.50.40 154 221 5.8E-10 T 17-10-2018 BJD13_14360 7846b5bf318d2dd58c861c7a7deadda7 296 Pfam PF03186 CobD/Cbib protein 9 166 3.2E-9 T 17-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 BJD13_18945 6ba568ee07bc8067be1706868ddaead0 529 Pfam PF08811 Protein of unknown function (DUF1800) 52 527 7.1E-128 T 17-10-2018 IPR014917 Protein of unknown function DUF1800 BJD13_01730 1ef474a8b133d8d6e012dad5415f8e06 265 Pfam PF00326 Prolyl oligopeptidase family 118 246 9.6E-11 T 17-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 BJD13_01730 1ef474a8b133d8d6e012dad5415f8e06 265 SUPERFAMILY SSF53474 32 248 2.45E-34 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_01730 1ef474a8b133d8d6e012dad5415f8e06 265 Gene3D G3DSA:3.40.50.1820 23 263 2.9E-57 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_00635 420406efa494444c91ece516585ae241 703 SUPERFAMILY SSF141072 593 699 1.27E-13 T 17-10-2018 IPR038081 CalX-like domain superfamily BJD13_00635 420406efa494444c91ece516585ae241 703 Pfam PF03160 Calx-beta domain 583 663 3.8E-6 T 17-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 BJD13_00635 420406efa494444c91ece516585ae241 703 Pfam PF06986 Type-1V conjugative transfer system mating pair stabilisation 415 488 1.6E-13 T 17-10-2018 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN BJD13_00635 420406efa494444c91ece516585ae241 703 Gene3D G3DSA:2.60.40.2030 591 702 1.2E-12 T 17-10-2018 IPR038081 CalX-like domain superfamily BJD13_09200 7f62e4d15f798b665e11914a98d2416e 263 Pfam PF05433 Glycine zipper 2TM domain 103 143 1.0E-9 T 17-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 BJD13_13285 d03c82a4c2abd8f3a5d90e30e3399910 123 Pfam PF04972 BON domain 51 118 1.1E-18 T 17-10-2018 IPR007055 BON domain BJD13_13285 d03c82a4c2abd8f3a5d90e30e3399910 123 SMART SM00749 56 119 4.5E-9 T 17-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria BJD13_13305 98c8d21374ee884ac90d489f1dc7d122 126 Pfam PF05433 Glycine zipper 2TM domain 66 107 5.8E-10 T 17-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 BJD13_09430 e9b025e15c04c46b68a34ccc23d27896 256 Gene3D G3DSA:2.60.40.10 40 158 3.3E-9 T 17-10-2018 IPR013783 Immunoglobulin-like fold BJD13_09430 e9b025e15c04c46b68a34ccc23d27896 256 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 40 157 1.5E-23 T 17-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 BJD13_09430 e9b025e15c04c46b68a34ccc23d27896 256 SUPERFAMILY SSF49354 35 157 2.09E-25 T 17-10-2018 IPR008962 PapD-like superfamily BJD13_15120 cb7225d550d78da82ebfc4017e0f9c99 262 SUPERFAMILY SSF100950 4 245 6.58E-74 T 17-10-2018 IPR037171 NagB/RpiA transferase-like BJD13_15120 cb7225d550d78da82ebfc4017e0f9c99 262 SMART SM00882 8 217 2.3E-42 T 17-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 BJD13_15120 cb7225d550d78da82ebfc4017e0f9c99 262 Pfam PF01144 Coenzyme A transferase 8 216 1.5E-51 T 17-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 BJD13_15120 cb7225d550d78da82ebfc4017e0f9c99 262 Gene3D G3DSA:3.40.1080.10 1 249 2.2E-84 T 17-10-2018 BJD13_07690 e9acb1da2e8f57b29619ba6de0f6fb24 499 Pfam PF05231 MASE1 10 274 3.8E-28 T 17-10-2018 IPR007895 MASE1 BJD13_10260 f8d0a545741f128f04bfdb1cb75f616a 789 Pfam PF00593 TonB dependent receptor 309 787 3.0E-34 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_10260 f8d0a545741f128f04bfdb1cb75f616a 789 Gene3D G3DSA:2.40.170.20 70 789 4.6E-133 T 17-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BJD13_10260 f8d0a545741f128f04bfdb1cb75f616a 789 Pfam PF07715 TonB-dependent Receptor Plug Domain 78 189 3.9E-12 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_10260 f8d0a545741f128f04bfdb1cb75f616a 789 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 72 - T 17-10-2018 IPR010916 TonB box, conserved site BJD13_10260 f8d0a545741f128f04bfdb1cb75f616a 789 SUPERFAMILY SSF56935 58 788 1.1E-108 T 17-10-2018 BJD13_00685 fb7f11f78af62c3e4e4763941407ba39 203 Pfam PF05309 TraE protein 1 179 1.9E-31 T 17-10-2018 IPR007973 Pilus assembly TraE GO:0000746 BJD13_22100 6a6ed7fa224f7009a545834d7adf6fa2 158 SUPERFAMILY SSF88697 5 156 1.91E-61 T 17-10-2018 IPR015947 PUA-like superfamily BJD13_22100 6a6ed7fa224f7009a545834d7adf6fa2 158 Gene3D G3DSA:3.10.590.10 1 158 3.9E-65 T 17-10-2018 BJD13_22100 6a6ed7fa224f7009a545834d7adf6fa2 158 Pfam PF01878 EVE domain 6 155 1.4E-55 T 17-10-2018 IPR002740 EVE domain BJD13_00175 7dbca427d97e786b2d02544b283ae81c 116 Pfam PF13560 Helix-turn-helix domain 19 78 8.0E-12 T 17-10-2018 BJD13_00175 7dbca427d97e786b2d02544b283ae81c 116 SMART SM00530 22 81 1.2E-13 T 17-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BJD13_00175 7dbca427d97e786b2d02544b283ae81c 116 Gene3D G3DSA:1.10.260.40 19 114 1.2E-24 T 17-10-2018 BJD13_00175 7dbca427d97e786b2d02544b283ae81c 116 SUPERFAMILY SSF47413 18 86 1.39E-14 T 17-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BJD13_07360 92a6e72cebb010a40a46783aa199f5f7 143 Pfam PF02794 RTX toxin acyltransferase family 10 122 1.7E-18 T 17-10-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 BJD13_16535 478543dace6819c0b2a56b4f55721188 299 Pfam PF01882 Protein of unknown function DUF58 44 132 4.3E-21 T 17-10-2018 IPR002881 Domain of unknown function DUF58 BJD13_17690 b12e7faf6c082ba141bbc812a6ea5c19 325 Pfam PF00331 Glycosyl hydrolase family 10 36 317 5.2E-50 T 17-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 BJD13_17690 b12e7faf6c082ba141bbc812a6ea5c19 325 SUPERFAMILY SSF51445 24 321 4.61E-81 T 17-10-2018 IPR017853 Glycoside hydrolase superfamily BJD13_17690 b12e7faf6c082ba141bbc812a6ea5c19 325 Gene3D G3DSA:3.20.20.80 22 324 1.1E-89 T 17-10-2018 BJD13_17690 b12e7faf6c082ba141bbc812a6ea5c19 325 SMART SM00633 58 321 3.2E-23 T 17-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 BJD13_04770 bda245f33f3526a93a98f95738a1e539 156 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 140 31.688 T 17-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 BJD13_04770 bda245f33f3526a93a98f95738a1e539 156 Pfam PF03100 CcmE 5 130 1.0E-42 T 17-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 BJD13_04770 bda245f33f3526a93a98f95738a1e539 156 SUPERFAMILY SSF82093 30 136 1.14E-37 T 17-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 BJD13_04770 bda245f33f3526a93a98f95738a1e539 156 Gene3D G3DSA:2.40.50.140 30 136 1.6E-36 T 17-10-2018 BJD13_15490 29cc13578b2adce651c9acb593aea535 516 SUPERFAMILY SSF51556 41 472 1.74E-61 T 17-10-2018 IPR032466 Metal-dependent hydrolase BJD13_15490 29cc13578b2adce651c9acb593aea535 516 Pfam PF00962 Adenosine/AMP deaminase 319 456 2.3E-22 T 17-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 BJD13_03625 5725acd0039f4b4c192b438e774f61b0 282 Pfam PF00753 Metallo-beta-lactamase superfamily 33 228 1.3E-15 T 17-10-2018 IPR001279 Metallo-beta-lactamase BJD13_03625 5725acd0039f4b4c192b438e774f61b0 282 Gene3D G3DSA:3.60.15.10 5 281 1.1E-53 T 17-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BJD13_03625 5725acd0039f4b4c192b438e774f61b0 282 SUPERFAMILY SSF56281 26 275 2.62E-30 T 17-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BJD13_03625 5725acd0039f4b4c192b438e774f61b0 282 SMART SM00849 34 269 3.0E-15 T 17-10-2018 IPR001279 Metallo-beta-lactamase BJD13_14025 f5959ab6064f6999eddd0d8a59ac2507 239 Gene3D G3DSA:1.10.10.10 3 80 4.9E-21 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_14025 f5959ab6064f6999eddd0d8a59ac2507 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 78 2.0E-17 T 17-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD13_14025 f5959ab6064f6999eddd0d8a59ac2507 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 38 52 1.3E-5 T 17-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD13_14025 f5959ab6064f6999eddd0d8a59ac2507 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 52 68 1.3E-5 T 17-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD13_14025 f5959ab6064f6999eddd0d8a59ac2507 239 SMART SM00345 20 78 2.7E-15 T 17-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BJD13_14025 f5959ab6064f6999eddd0d8a59ac2507 239 Pfam PF07729 FCD domain 88 210 7.0E-28 T 17-10-2018 IPR011711 GntR, C-terminal BJD13_14025 f5959ab6064f6999eddd0d8a59ac2507 239 SUPERFAMILY SSF48008 84 217 2.09E-25 T 17-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal BJD13_14025 f5959ab6064f6999eddd0d8a59ac2507 239 SMART SM00895 88 212 7.7E-21 T 17-10-2018 IPR011711 GntR, C-terminal BJD13_14025 f5959ab6064f6999eddd0d8a59ac2507 239 Gene3D G3DSA:1.20.120.530 81 224 8.6E-30 T 17-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal BJD13_14025 f5959ab6064f6999eddd0d8a59ac2507 239 SUPERFAMILY SSF46785 12 82 2.62E-19 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_01795 d16412a923201b213c49e638140171f1 191 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 14 186 2.9E-41 T 17-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related BJD13_01795 d16412a923201b213c49e638140171f1 191 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 2 188 22.355 T 17-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 BJD13_01795 d16412a923201b213c49e638140171f1 191 Gene3D G3DSA:2.60.450.10 61 191 9.5E-13 T 17-10-2018 BJD13_01795 d16412a923201b213c49e638140171f1 191 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 10 185 9.8E-48 T 17-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 BJD13_07660 c6fd4209f5e1d0bf1cc41ea4419e8976 161 Gene3D G3DSA:3.30.70.560 1 158 4.4E-53 T 17-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 BJD13_07660 c6fd4209f5e1d0bf1cc41ea4419e8976 161 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 135 2.7E-42 T 17-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 BJD13_07660 c6fd4209f5e1d0bf1cc41ea4419e8976 161 SUPERFAMILY SSF55083 1 149 6.41E-50 T 17-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 BJD13_07660 c6fd4209f5e1d0bf1cc41ea4419e8976 161 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 135 7.3E-35 T 17-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 BJD13_07660 c6fd4209f5e1d0bf1cc41ea4419e8976 161 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 90 101 - T 17-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 BJD13_18180 eb39c402b7c7ed0b339e4167d83d9001 542 SUPERFAMILY SSF56300 166 512 1.59E-33 T 17-10-2018 BJD13_18180 eb39c402b7c7ed0b339e4167d83d9001 542 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 57 154 1.1E-27 T 17-10-2018 IPR032093 Phospholipase D, N-terminal BJD13_18180 eb39c402b7c7ed0b339e4167d83d9001 542 Pfam PF09423 PhoD-like phosphatase 167 510 1.3E-104 T 17-10-2018 IPR018946 Alkaline phosphatase D-related BJD13_18180 eb39c402b7c7ed0b339e4167d83d9001 542 Gene3D G3DSA:3.60.21.70 159 542 8.2E-128 T 17-10-2018 IPR038607 PhoD-like superfamily BJD13_18180 eb39c402b7c7ed0b339e4167d83d9001 542 Gene3D G3DSA:2.60.40.380 48 157 3.7E-32 T 17-10-2018 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 BJD13_21335 2cf533c03b58d3c9d6e41f30e671f9a0 959 SUPERFAMILY SSF56935 29 959 5.49E-105 T 17-10-2018 BJD13_21335 2cf533c03b58d3c9d6e41f30e671f9a0 959 Pfam PF00593 TonB dependent receptor 390 957 1.7E-52 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_21335 2cf533c03b58d3c9d6e41f30e671f9a0 959 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 180 1.7E-22 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_21335 2cf533c03b58d3c9d6e41f30e671f9a0 959 Gene3D G3DSA:2.170.130.10 36 184 3.3E-34 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_15740 3502d0e3b3276a2530142307eaacf05f 386 TIGRFAM TIGR04511 SagB_rel_DH_2: putative peptide maturation dehydrogenase 3 377 9.5E-164 T 17-10-2018 IPR030965 Putative peptide maturation dehydrogenase BJD13_15740 3502d0e3b3276a2530142307eaacf05f 386 SUPERFAMILY SSF55469 170 382 4.4E-25 T 17-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 BJD13_15740 3502d0e3b3276a2530142307eaacf05f 386 Gene3D G3DSA:3.40.109.10 151 381 6.8E-58 T 17-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 BJD13_15740 3502d0e3b3276a2530142307eaacf05f 386 Pfam PF00881 Nitroreductase family 178 365 2.4E-23 T 17-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 BJD13_15740 3502d0e3b3276a2530142307eaacf05f 386 TIGRFAM TIGR03605 antibiot_sagB: SagB-type dehydrogenase domain 194 364 1.0E-39 T 17-10-2018 IPR020051 SagB-type dehydrogenase domain BJD13_19035 20620f3d50636ad789467af9ab44692a 69 SUPERFAMILY SSF69047 1 66 8.89E-24 T 17-10-2018 IPR036629 YjbJ superfamily BJD13_19035 20620f3d50636ad789467af9ab44692a 69 Pfam PF05532 CsbD-like 4 55 2.2E-19 T 17-10-2018 IPR008462 CsbD-like domain BJD13_19035 20620f3d50636ad789467af9ab44692a 69 PIRSF PIRSF039008 1 66 1.7E-30 T 17-10-2018 IPR026042 Stress response protein YjbJ BJD13_19035 20620f3d50636ad789467af9ab44692a 69 Gene3D G3DSA:1.10.1470.10 1 65 1.3E-27 T 17-10-2018 IPR036629 YjbJ superfamily BJD13_00595 493d8e97b8baf12a30ed660f472418a5 511 Pfam PF05231 MASE1 10 279 5.8E-32 T 17-10-2018 IPR007895 MASE1 BJD13_15345 f6977a6f0e9f75ad8444800a55a030d0 342 Gene3D G3DSA:3.20.20.210 1 342 2.8E-131 T 17-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 BJD13_15345 f6977a6f0e9f75ad8444800a55a030d0 342 PIRSF PIRSF005632 1 342 1.8E-196 T 17-10-2018 IPR016456 Predicted cobalamin-independent methionine synthase, catalytic subunit BJD13_15345 f6977a6f0e9f75ad8444800a55a030d0 342 SUPERFAMILY SSF51726 4 338 2.22E-65 T 17-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 BJD13_15345 f6977a6f0e9f75ad8444800a55a030d0 342 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 5 329 4.6E-36 T 17-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 BJD13_20320 4b085fcf4b2a01be351cc396d7534b09 94 SUPERFAMILY SSF54909 1 84 1.45E-11 T 17-10-2018 IPR011008 Dimeric alpha-beta barrel BJD13_20320 4b085fcf4b2a01be351cc396d7534b09 94 Pfam PF03795 YCII-related domain 1 74 3.1E-5 T 17-10-2018 IPR005545 YCII-related BJD13_05445 c8582554795d28ceb0c092067afefa7d 111 SMART SM00507 26 77 6.4E-5 T 17-10-2018 IPR003615 HNH nuclease BJD13_23640 1824af646ae80193c7aee8c0fbebe35f 307 Gene3D G3DSA:3.40.50.1820 8 285 8.6E-53 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_23640 1824af646ae80193c7aee8c0fbebe35f 307 Pfam PF12146 Serine aminopeptidase, S33 33 272 1.6E-18 T 17-10-2018 IPR022742 Serine aminopeptidase, S33 BJD13_23640 1824af646ae80193c7aee8c0fbebe35f 307 PRINTS PR00111 Alpha/beta hydrolase fold signature 61 76 8.6E-6 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD13_23640 1824af646ae80193c7aee8c0fbebe35f 307 PRINTS PR00111 Alpha/beta hydrolase fold signature 120 133 8.6E-6 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD13_23640 1824af646ae80193c7aee8c0fbebe35f 307 PRINTS PR00111 Alpha/beta hydrolase fold signature 106 119 8.6E-6 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD13_23640 1824af646ae80193c7aee8c0fbebe35f 307 PRINTS PR00111 Alpha/beta hydrolase fold signature 231 245 8.6E-6 T 17-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BJD13_23640 1824af646ae80193c7aee8c0fbebe35f 307 SUPERFAMILY SSF53474 17 285 9.79E-42 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_20105 5b8de91a802b8afb97486cdd97e0463f 133 Pfam PF06995 Phage P2 GpU 6 125 6.5E-42 T 17-10-2018 IPR009734 Myoviridae, GpU BJD13_20105 5b8de91a802b8afb97486cdd97e0463f 133 PIRSF PIRSF029208 1 132 2.4E-49 T 17-10-2018 IPR016912 Bacteriophage P2, GpU BJD13_04425 3a797571e9261b6a1b15402d37136a44 292 Hamap MF_00188 Protease HtpX [htpX]. 2 287 25.802 T 17-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 BJD13_04425 3a797571e9261b6a1b15402d37136a44 292 Pfam PF01435 Peptidase family M48 76 286 2.2E-41 T 17-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 BJD13_04425 3a797571e9261b6a1b15402d37136a44 292 Gene3D G3DSA:3.30.2010.10 65 158 3.2E-35 T 17-10-2018 BJD13_03100 93fd44ef37466c5aa2fef2d052c51d12 290 Pfam PF11231 Protein of unknown function (DUF3034) 33 287 1.0E-106 T 17-10-2018 IPR021393 Protein of unknown function DUF3034 BJD13_11200 a9f190028d653be6f3a37165f86ae219 532 Pfam PF03389 MobA/MobL family 19 156 5.6E-38 T 17-10-2018 IPR005053 MobA/MobL protein BJD13_11200 a9f190028d653be6f3a37165f86ae219 532 Gene3D G3DSA:3.30.930.30 6 198 5.6E-53 T 17-10-2018 BJD13_11820 deb097db7ce10454eb7e2138116455c1 454 ProSitePatterns PS00756 Protein secY signature 2. 175 192 - T 17-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BJD13_11820 deb097db7ce10454eb7e2138116455c1 454 Gene3D G3DSA:1.10.3370.10 13 434 4.1E-153 T 17-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BJD13_11820 deb097db7ce10454eb7e2138116455c1 454 SUPERFAMILY SSF103491 15 429 8.63E-122 T 17-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BJD13_11820 deb097db7ce10454eb7e2138116455c1 454 Hamap MF_01465 Protein translocase subunit SecY [secY]. 10 438 28.09 T 17-10-2018 IPR026593 Protein translocase subunit SecY BJD13_11820 deb097db7ce10454eb7e2138116455c1 454 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 434 3.6E-124 T 17-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BJD13_11820 deb097db7ce10454eb7e2138116455c1 454 PIRSF PIRSF004557 14 446 2.3E-115 T 17-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BJD13_11820 deb097db7ce10454eb7e2138116455c1 454 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 17-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BJD13_11820 deb097db7ce10454eb7e2138116455c1 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 4.5E-88 T 17-10-2018 BJD13_11820 deb097db7ce10454eb7e2138116455c1 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 4.5E-88 T 17-10-2018 BJD13_11820 deb097db7ce10454eb7e2138116455c1 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 182 205 4.5E-88 T 17-10-2018 BJD13_11820 deb097db7ce10454eb7e2138116455c1 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 375 393 4.5E-88 T 17-10-2018 BJD13_11820 deb097db7ce10454eb7e2138116455c1 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 274 293 4.5E-88 T 17-10-2018 BJD13_11820 deb097db7ce10454eb7e2138116455c1 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 320 342 4.5E-88 T 17-10-2018 BJD13_11820 deb097db7ce10454eb7e2138116455c1 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 4.5E-88 T 17-10-2018 BJD13_11820 deb097db7ce10454eb7e2138116455c1 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 156 181 4.5E-88 T 17-10-2018 BJD13_11820 deb097db7ce10454eb7e2138116455c1 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 407 425 4.5E-88 T 17-10-2018 BJD13_11820 deb097db7ce10454eb7e2138116455c1 454 Pfam PF00344 SecY translocase 76 421 1.9E-108 T 17-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BJD13_16585 de34803763a7b9ef9c7d36f703465601 132 Pfam PF10116 Protein required for attachment to host cells 10 131 2.0E-25 T 17-10-2018 IPR019291 Host attachment protein BJD13_02075 e135ce02caa92d20877149429c5ec124 199 Pfam PF05433 Glycine zipper 2TM domain 99 137 2.7E-7 T 17-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 BJD13_08210 4bb39418b28c3b5076b8ff7b34aab69d 218 Pfam PF13490 Putative zinc-finger 12 45 2.7E-5 T 17-10-2018 IPR027383 Putative zinc-finger BJD13_20400 d49938436d236e215e1c1aaf4175f00d 245 Pfam PF11828 Protein of unknown function (DUF3348) 1 243 1.7E-83 T 17-10-2018 IPR021783 Protein of unknown function DUF3348 BJD13_21710 4873d52328ed2c86f888f20de0a7494a 461 TIGRFAM TIGR00784 citMHS: citrate transporter 20 456 2.6E-191 T 17-10-2018 IPR014738 Citrate transporter GO:0015137|GO:0015746 BJD13_21710 4873d52328ed2c86f888f20de0a7494a 461 Pfam PF03600 Citrate transporter 32 405 3.0E-57 T 17-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 BJD13_14100 f58a18aa00b19bfc7158540934c276ab 315 Pfam PF06258 Mitochondrial fission ELM1 12 313 7.5E-80 T 17-10-2018 IPR009367 Mitochondrial fission protein ELM1-like BJD13_22260 bc3cdab9ce860160237e1a25075844a3 320 Pfam PF01882 Protein of unknown function DUF58 68 151 6.4E-19 T 17-10-2018 IPR002881 Domain of unknown function DUF58 BJD13_14855 881c8e1b6fa063625bed448763c80ccc 276 TIGRFAM TIGR01401 fliR_like_III: type III secretion apparatus protein SpaR/YscT/HrcT 13 264 9.2E-81 T 17-10-2018 IPR006304 Type III secretion protein SpaR/YscT GO:0016021 BJD13_14855 881c8e1b6fa063625bed448763c80ccc 276 Pfam PF01311 Bacterial export proteins, family 1 20 252 1.6E-48 T 17-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BJD13_14855 881c8e1b6fa063625bed448763c80ccc 276 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 87 106 1.8E-25 T 17-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BJD13_14855 881c8e1b6fa063625bed448763c80ccc 276 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 28 49 1.8E-25 T 17-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BJD13_14855 881c8e1b6fa063625bed448763c80ccc 276 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 211 230 1.8E-25 T 17-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BJD13_14855 881c8e1b6fa063625bed448763c80ccc 276 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 189 211 1.8E-25 T 17-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BJD13_02210 4b99d6bd954abeb9f64702a79fa5005e 690 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 463 591 3.3E-36 T 17-10-2018 IPR025299 CstA, C-terminal domain BJD13_02210 4b99d6bd954abeb9f64702a79fa5005e 690 Pfam PF02554 Carbon starvation protein CstA 31 408 2.3E-165 T 17-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 BJD13_14575 1ea75d9672e597bb4ff2afe976dcfc82 514 Pfam PF00361 Proton-conducting membrane transporter 129 420 3.5E-31 T 17-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_14575 1ea75d9672e597bb4ff2afe976dcfc82 514 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 163 187 2.4E-6 T 17-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_14575 1ea75d9672e597bb4ff2afe976dcfc82 514 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 381 407 2.4E-6 T 17-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_14575 1ea75d9672e597bb4ff2afe976dcfc82 514 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 133 152 2.4E-6 T 17-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_14575 1ea75d9672e597bb4ff2afe976dcfc82 514 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 236 260 2.4E-6 T 17-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_22150 866b78884d59caae012a20a2a7dbd680 809 Pfam PF07793 Protein of unknown function (DUF1631) 22 795 6.1E-198 T 17-10-2018 IPR012434 Protein of unknown function DUF1631 BJD13_08670 b4084a83947d92cdf2024c7d1712097e 317 Pfam PF07920 Protein of unknown function (DUF1684) 174 310 4.6E-43 T 17-10-2018 IPR012467 Protein of unknown function DUF1684 BJD13_03930 348676afdbb390d1527f72e2844e5f40 356 SUPERFAMILY SSF111337 2 344 2.88E-129 T 17-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 BJD13_03930 348676afdbb390d1527f72e2844e5f40 356 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 3 344 1.4E-126 T 17-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 BJD13_03930 348676afdbb390d1527f72e2844e5f40 356 Gene3D G3DSA:2.40.10.240 64 161 1.0E-112 T 17-10-2018 BJD13_03930 348676afdbb390d1527f72e2844e5f40 356 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 345 45.963 T 17-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 BJD13_03930 348676afdbb390d1527f72e2844e5f40 356 Pfam PF02547 Queuosine biosynthesis protein 4 344 6.6E-129 T 17-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 BJD13_03930 348676afdbb390d1527f72e2844e5f40 356 Gene3D G3DSA:3.40.1780.10 14 344 1.0E-112 T 17-10-2018 BJD13_06595 9d551bb2e2f7e0b1755b8fcb373e5b18 430 Gene3D G3DSA:3.30.750.140 290 401 2.1E-32 T 17-10-2018 IPR038610 FliK-like, C-terminal domain superfamily BJD13_06595 9d551bb2e2f7e0b1755b8fcb373e5b18 430 Pfam PF02120 Flagellar hook-length control protein FliK 311 391 4.6E-24 T 17-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal BJD13_05735 dd6e462618d669a838400069102a40c0 388 Gene3D G3DSA:3.40.50.300 3 180 2.9E-37 T 17-10-2018 BJD13_05735 dd6e462618d669a838400069102a40c0 388 Pfam PF05707 Zonular occludens toxin (Zot) 52 179 9.8E-18 T 17-10-2018 IPR008900 Zona occludens toxin BJD13_05735 dd6e462618d669a838400069102a40c0 388 SUPERFAMILY SSF52540 9 118 1.63E-9 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_05735 dd6e462618d669a838400069102a40c0 388 SMART SM00382 5 130 0.0051 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_21815 bbc9c40ae96cf47310d0d29eef141612 443 Pfam PF04932 O-Antigen ligase 221 372 4.8E-23 T 17-10-2018 IPR007016 O-antigen ligase-related BJD13_12455 d2a427f41290be58dca130c9ac5dd6f9 302 Gene3D G3DSA:3.40.800.20 1 302 1.5E-106 T 17-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 BJD13_12455 d2a427f41290be58dca130c9ac5dd6f9 302 PRINTS PR01270 Histone deacetylase superfamily signature 231 241 4.2E-16 T 17-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 BJD13_12455 d2a427f41290be58dca130c9ac5dd6f9 302 PRINTS PR01270 Histone deacetylase superfamily signature 151 166 4.2E-16 T 17-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 BJD13_12455 d2a427f41290be58dca130c9ac5dd6f9 302 PRINTS PR01270 Histone deacetylase superfamily signature 117 140 4.2E-16 T 17-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 BJD13_12455 d2a427f41290be58dca130c9ac5dd6f9 302 SUPERFAMILY SSF52768 1 301 1.34E-96 T 17-10-2018 IPR023696 Ureohydrolase domain superfamily BJD13_12455 d2a427f41290be58dca130c9ac5dd6f9 302 Pfam PF00850 Histone deacetylase domain 18 301 3.5E-76 T 17-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 BJD13_09640 aae626d9b02652e1461a40901dc2664d 149 Gene3D G3DSA:2.40.128.520 28 149 9.3E-21 T 17-10-2018 BJD13_09640 aae626d9b02652e1461a40901dc2664d 149 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 29 148 1.8E-33 T 17-10-2018 IPR019223 Domain of unknown function DUF2147 BJD13_04215 2373337069dfff7be87d001c3edfb23e 327 Gene3D G3DSA:3.40.50.300 109 315 3.7E-70 T 17-10-2018 BJD13_04215 2373337069dfff7be87d001c3edfb23e 327 SUPERFAMILY SSF52540 117 290 4.43E-36 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_04215 2373337069dfff7be87d001c3edfb23e 327 Pfam PF02562 PhoH-like protein 112 315 4.9E-92 T 17-10-2018 IPR003714 PhoH-like protein GO:0005524 BJD13_21955 3c8192ef54fb5434d24705ccb4c89f0e 675 Pfam PF03030 Inorganic H+ pyrophosphatase 15 670 9.4E-269 T 17-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 BJD13_21955 3c8192ef54fb5434d24705ccb4c89f0e 675 Hamap MF_01129 Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 4 675 25.642 T 17-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 BJD13_21955 3c8192ef54fb5434d24705ccb4c89f0e 675 PIRSF PIRSF001265 2 675 1.2E-264 T 17-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 BJD13_21955 3c8192ef54fb5434d24705ccb4c89f0e 675 TIGRFAM TIGR01104 V_PPase: V-type H(+)-translocating pyrophosphatase 12 675 1.9E-267 T 17-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 BJD13_06145 a02ef1c3597e3077a99280bddea5b088 189 Gene3D G3DSA:3.90.550.10 1 186 1.6E-40 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD13_06145 a02ef1c3597e3077a99280bddea5b088 189 SUPERFAMILY SSF53448 7 180 5.86E-28 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD13_06145 a02ef1c3597e3077a99280bddea5b088 189 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 5 183 19.221 T 17-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 BJD13_06145 a02ef1c3597e3077a99280bddea5b088 189 Pfam PF12804 MobA-like NTP transferase domain 9 151 5.9E-29 T 17-10-2018 IPR025877 MobA-like NTP transferase BJD13_08065 c38261b290eb5a605db40a2a70d2fc96 222 PIRSF PIRSF033239 12 215 6.0E-44 T 17-10-2018 IPR010331 Exopolysaccharide synthesis, ExoD BJD13_08065 c38261b290eb5a605db40a2a70d2fc96 222 Pfam PF06055 Exopolysaccharide synthesis, ExoD 27 203 2.5E-47 T 17-10-2018 IPR010331 Exopolysaccharide synthesis, ExoD BJD13_05465 f05602885496725e6a0c38d3c23627a3 309 Pfam PF13481 AAA domain 5 170 6.4E-30 T 17-10-2018 BJD13_05465 f05602885496725e6a0c38d3c23627a3 309 SUPERFAMILY SSF52540 8 201 1.03E-21 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_05465 f05602885496725e6a0c38d3c23627a3 309 Gene3D G3DSA:3.40.50.300 1 225 1.6E-39 T 17-10-2018 BJD13_13790 a76da868835fc3304959ed84b27807f3 111 TIGRFAM TIGR03954 integ_memb_HG: integral membrane protein 14 97 2.5E-19 T 17-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane BJD13_13790 a76da868835fc3304959ed84b27807f3 111 Pfam PF12823 Domain of unknown function (DUF3817) 13 99 5.5E-18 T 17-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane BJD13_21695 133adf780e4c141d71b0b44520c44ac8 441 SUPERFAMILY SSF103473 13 435 3.4E-37 T 17-10-2018 IPR036259 MFS transporter superfamily BJD13_21695 133adf780e4c141d71b0b44520c44ac8 441 Gene3D G3DSA:1.20.1250.20 9 430 5.6E-33 T 17-10-2018 BJD13_21695 133adf780e4c141d71b0b44520c44ac8 441 Pfam PF07690 Major Facilitator Superfamily 20 391 1.3E-21 T 17-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD13_07350 b16e842e5fb206d6e5af444039470dea 547 Gene3D G3DSA:3.30.930.30 2 200 2.3E-53 T 17-10-2018 BJD13_07350 b16e842e5fb206d6e5af444039470dea 547 Pfam PF03389 MobA/MobL family 18 207 7.4E-38 T 17-10-2018 IPR005053 MobA/MobL protein BJD13_05580 b68fc1fb7d380aedb1b01bc8a90fad38 384 SUPERFAMILY SSF53474 3 382 9.89E-93 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_05580 b68fc1fb7d380aedb1b01bc8a90fad38 384 PIRSF PIRSF001112 1 384 1.1E-118 T 17-10-2018 IPR016292 Epoxide hydrolase GO:0033961 Reactome: R-HSA-211945 BJD13_05580 b68fc1fb7d380aedb1b01bc8a90fad38 384 Gene3D G3DSA:3.40.50.1820 5 384 2.5E-131 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_05580 b68fc1fb7d380aedb1b01bc8a90fad38 384 PRINTS PR00412 Epoxide hydrolase signature 176 189 2.8E-12 T 17-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 BJD13_05580 b68fc1fb7d380aedb1b01bc8a90fad38 384 PRINTS PR00412 Epoxide hydrolase signature 130 145 2.8E-12 T 17-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 BJD13_05580 b68fc1fb7d380aedb1b01bc8a90fad38 384 PRINTS PR00412 Epoxide hydrolase signature 101 119 2.8E-12 T 17-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 BJD13_05580 b68fc1fb7d380aedb1b01bc8a90fad38 384 PRINTS PR00412 Epoxide hydrolase signature 357 379 2.8E-12 T 17-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 BJD13_05580 b68fc1fb7d380aedb1b01bc8a90fad38 384 Pfam PF06441 Epoxide hydrolase N terminus 6 110 1.6E-33 T 17-10-2018 IPR010497 Epoxide hydrolase, N-terminal Reactome: R-HSA-211945 BJD13_06510 ab3b5de7dfa7a804418fa33d3e1a31e1 369 Gene3D G3DSA:3.40.640.10 2 367 4.8E-103 T 17-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BJD13_06510 ab3b5de7dfa7a804418fa33d3e1a31e1 369 PIRSF PIRSF000390 1 368 5.3E-102 T 17-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase BJD13_06510 ab3b5de7dfa7a804418fa33d3e1a31e1 369 SUPERFAMILY SSF53383 2 365 1.28E-98 T 17-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BJD13_06510 ab3b5de7dfa7a804418fa33d3e1a31e1 369 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 14 362 1.6E-99 T 17-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase BJD13_15615 2284589d2a1345af4f7f58ed77c5f4fa 267 Pfam PF11101 Protein of unknown function (DUF2884) 32 241 2.4E-32 T 17-10-2018 IPR021307 Protein of unknown function DUF2884 BJD13_08910 dc0e225903949d456fffd7993897733e 176 Pfam PF11101 Protein of unknown function (DUF2884) 34 118 7.2E-9 T 17-10-2018 IPR021307 Protein of unknown function DUF2884 BJD13_15855 2531c5a254d1aef817a3cb42e36a7af5 52 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 1 51 20.278 T 17-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 BJD13_15855 2531c5a254d1aef817a3cb42e36a7af5 52 PIRSF PIRSF036466 1 52 3.3E-22 T 17-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 BJD13_15855 2531c5a254d1aef817a3cb42e36a7af5 52 Pfam PF07043 Protein of unknown function (DUF1328) 6 44 1.0E-15 T 17-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 BJD13_08090 55d20a4e6dd4d7f0e419a3adacfac139 352 Gene3D G3DSA:3.40.50.300 160 251 4.7E-9 T 17-10-2018 BJD13_08090 55d20a4e6dd4d7f0e419a3adacfac139 352 SUPERFAMILY SSF53795 165 211 1.62E-9 T 17-10-2018 BJD13_11305 4a83b2a7e2b334c87c8c5889108e34ca 100 Pfam PF13031 Protein of unknown function (DUF3892) 9 98 5.5E-15 T 17-10-2018 IPR024997 Protein of unknown function DUF3892 BJD13_01515 f3c90d856d23813586d7ba0c0d4d956e 492 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 40 251 1.8E-25 T 17-10-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 BJD13_01515 f3c90d856d23813586d7ba0c0d4d956e 492 TIGRFAM TIGR02783 TrbL_P: P-type conjugative transfer protein TrbL 6 304 2.3E-43 T 17-10-2018 IPR014150 Conjugal transfer, TrbL BJD13_20205 798250cbc929a08f374b710e2ad80008 69 Gene3D G3DSA:3.10.350.10 1 69 5.1E-28 T 17-10-2018 IPR036779 LysM domain superfamily BJD13_20205 798250cbc929a08f374b710e2ad80008 69 Pfam PF05489 Phage Tail Protein X 1 60 7.9E-30 T 17-10-2018 IPR008861 Phage Tail Protein X-like BJD13_03730 d9bd3f6e6a075ab3a1f7e2d570963b73 312 PIRSF PIRSF029792 1 312 5.6E-101 T 17-10-2018 IPR008794 Proline racemase family BJD13_03730 d9bd3f6e6a075ab3a1f7e2d570963b73 312 Gene3D G3DSA:3.10.310.10 134 288 2.8E-114 T 17-10-2018 BJD13_03730 d9bd3f6e6a075ab3a1f7e2d570963b73 312 SUPERFAMILY SSF54506 1 310 5.38E-93 T 17-10-2018 BJD13_03730 d9bd3f6e6a075ab3a1f7e2d570963b73 312 Gene3D G3DSA:3.10.310.10 4 307 2.8E-114 T 17-10-2018 BJD13_03730 d9bd3f6e6a075ab3a1f7e2d570963b73 312 Pfam PF05544 Proline racemase 6 310 3.3E-107 T 17-10-2018 IPR008794 Proline racemase family BJD13_09015 f59c77a2ebafda4a633430c2c1de48e5 302 Pfam PF08543 Phosphomethylpyrimidine kinase 113 276 1.2E-18 T 17-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 BJD13_09015 f59c77a2ebafda4a633430c2c1de48e5 302 SUPERFAMILY SSF53613 25 279 3.59E-55 T 17-10-2018 IPR029056 Ribokinase-like BJD13_09015 f59c77a2ebafda4a633430c2c1de48e5 302 Gene3D G3DSA:3.40.1190.20 23 302 2.4E-63 T 17-10-2018 IPR029056 Ribokinase-like BJD13_09015 f59c77a2ebafda4a633430c2c1de48e5 302 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 24 300 3.0E-50 T 17-10-2018 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-6798695|Reactome: R-HSA-964975 BJD13_22160 0015c7297baca565436c335f9ecc8a4a 199 SUPERFAMILY SSF52972 1 194 1.39E-69 T 17-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like BJD13_22160 0015c7297baca565436c335f9ecc8a4a 199 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 4 194 9.5E-54 T 17-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 BJD13_22160 0015c7297baca565436c335f9ecc8a4a 199 Gene3D G3DSA:3.90.950.10 1 198 1.6E-72 T 17-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like BJD13_22160 0015c7297baca565436c335f9ecc8a4a 199 Hamap MF_01405 dITP/XTP pyrophosphatase. 2 196 50.345 T 17-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 BJD13_22160 0015c7297baca565436c335f9ecc8a4a 199 Pfam PF01725 Ham1 family 4 191 4.6E-52 T 17-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 BJD13_02205 14c8ebdea6a28bcdbb57d91af524e999 74 Pfam PF04328 Selenoprotein, putative 14 74 3.5E-26 T 17-10-2018 IPR007423 Selenoprotein, putative BJD13_02675 199ad7a484584b899275f9086503e112 323 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 71 239 1.5E-26 T 17-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 BJD13_02675 199ad7a484584b899275f9086503e112 323 SUPERFAMILY SSF50891 70 284 7.31E-28 T 17-10-2018 IPR029000 Cyclophilin-like domain superfamily BJD13_02675 199ad7a484584b899275f9086503e112 323 Gene3D G3DSA:2.40.100.10 33 242 1.2E-31 T 17-10-2018 IPR029000 Cyclophilin-like domain superfamily BJD13_10960 f5e32d43fdadf899a7275c30a956f7c2 158 SUPERFAMILY SSF49764 23 146 4.53E-38 T 17-10-2018 IPR008978 HSP20-like chaperone BJD13_10960 f5e32d43fdadf899a7275c30a956f7c2 158 Gene3D G3DSA:2.60.40.790 8 146 2.7E-38 T 17-10-2018 IPR008978 HSP20-like chaperone BJD13_10960 f5e32d43fdadf899a7275c30a956f7c2 158 Pfam PF00011 Hsp20/alpha crystallin family 47 146 2.1E-24 T 17-10-2018 IPR002068 Alpha crystallin/Hsp20 domain BJD13_17580 2c9e6ec5424abc1879a0355aa1088095 319 Pfam PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) 51 291 1.1E-42 T 17-10-2018 IPR005519 Acid phosphatase, class B-like BJD13_17580 2c9e6ec5424abc1879a0355aa1088095 319 SUPERFAMILY SSF56784 108 298 5.67E-31 T 17-10-2018 IPR036412 HAD-like superfamily BJD13_17580 2c9e6ec5424abc1879a0355aa1088095 319 PIRSF PIRSF019271 16 319 7.6E-103 T 17-10-2018 IPR006423 5-nucleotidase lipoprotein e(P4) GO:0009279 BJD13_17580 2c9e6ec5424abc1879a0355aa1088095 319 Gene3D G3DSA:3.40.50.1000 49 319 1.8E-82 T 17-10-2018 IPR023214 HAD superfamily BJD13_02395 d0fa966d19a44865f7b5dce20a4370a3 501 Gene3D G3DSA:2.20.200.10 113 370 1.8E-141 T 17-10-2018 BJD13_02395 d0fa966d19a44865f7b5dce20a4370a3 501 Pfam PF02321 Outer membrane efflux protein 296 479 3.9E-31 T 17-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 BJD13_02395 d0fa966d19a44865f7b5dce20a4370a3 501 Pfam PF02321 Outer membrane efflux protein 76 266 8.3E-23 T 17-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 BJD13_02395 d0fa966d19a44865f7b5dce20a4370a3 501 SUPERFAMILY SSF56954 3 484 4.97E-114 T 17-10-2018 BJD13_02395 d0fa966d19a44865f7b5dce20a4370a3 501 Gene3D G3DSA:1.20.1600.10 67 482 1.8E-141 T 17-10-2018 BJD13_02395 d0fa966d19a44865f7b5dce20a4370a3 501 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 14 481 1.6E-125 T 17-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 BJD13_08410 4946c745de50553a25933eed19fd513d 285 TIGRFAM TIGR02017 hutG_amidohyd: N-formylglutamate deformylase 6 272 2.1E-130 T 17-10-2018 IPR010247 N-formylglutamate deformylase BJD13_08410 4946c745de50553a25933eed19fd513d 285 Pfam PF05013 N-formylglutamate amidohydrolase 15 233 1.5E-67 T 17-10-2018 IPR007709 N-formylglutamate amidohydrolase BJD13_08410 4946c745de50553a25933eed19fd513d 285 SUPERFAMILY SSF53187 5 269 8.48E-79 T 17-10-2018 BJD13_08410 4946c745de50553a25933eed19fd513d 285 Gene3D G3DSA:3.40.630.40 3 260 4.5E-69 T 17-10-2018 BJD13_07230 caee944b13e43281d58d27f0709b2064 247 Pfam PF13645 L,D-transpeptidase catalytic domain 50 219 3.4E-65 T 17-10-2018 IPR032676 Putative L,D-transpeptidase tautomerase BJD13_12450 35d2a811adbd1b0b4fb57047a5e6cb6e 185 Pfam PF01923 Cobalamin adenosyltransferase 8 166 8.3E-57 T 17-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 BJD13_12450 35d2a811adbd1b0b4fb57047a5e6cb6e 185 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 28 178 7.0E-73 T 17-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 BJD13_12450 35d2a811adbd1b0b4fb57047a5e6cb6e 185 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 9 179 2.6E-57 T 17-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 BJD13_12450 35d2a811adbd1b0b4fb57047a5e6cb6e 185 SUPERFAMILY SSF89028 7 179 3.73E-58 T 17-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 BJD13_12450 35d2a811adbd1b0b4fb57047a5e6cb6e 185 Gene3D G3DSA:1.20.1200.10 17 184 5.1E-59 T 17-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 BJD13_11300 a8472683739059959cfd648255f50685 257 Pfam PF07751 Abi-like protein 2 182 1.0E-46 T 17-10-2018 IPR011664 Abortive infection system protein AbiD/AbiF-like BJD13_22765 dee9e34ec1ab7e67284c6041aa6918c8 94 SUPERFAMILY SSF47598 1 59 2.82E-9 T 17-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 BJD13_22765 dee9e34ec1ab7e67284c6041aa6918c8 94 Gene3D G3DSA:1.10.1220.10 4 47 5.0E-5 T 17-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 BJD13_16430 7aa5969081bbae37383b39196bc59222 388 Gene3D G3DSA:3.20.20.70 3 383 9.4E-127 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD13_16430 7aa5969081bbae37383b39196bc59222 388 PIRSF PIRSF000138 2 380 2.1E-123 T 17-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 BJD13_16430 7aa5969081bbae37383b39196bc59222 388 SUPERFAMILY SSF51395 6 373 1.77E-98 T 17-10-2018 BJD13_16430 7aa5969081bbae37383b39196bc59222 388 Pfam PF01070 FMN-dependent dehydrogenase 13 376 3.5E-127 T 17-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 BJD13_16430 7aa5969081bbae37383b39196bc59222 388 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 17-10-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 Reactome: R-HSA-9033241 BJD13_16430 7aa5969081bbae37383b39196bc59222 388 Hamap MF_01559 L-lactate dehydrogenase [lldD]. 1 380 74.941 T 17-10-2018 IPR020920 L-lactate dehydrogenase, bacterial GO:0004457|GO:0006089|GO:0010181|GO:0055114 BJD13_17655 6ffbc61f944fead70a06049f918bb2ad 177 Gene3D G3DSA:2.40.128.20 21 177 3.8E-30 T 17-10-2018 IPR012674 Calycin BJD13_17655 6ffbc61f944fead70a06049f918bb2ad 177 PRINTS PR01171 Bacterial lipocalin signature 136 147 2.2E-9 T 17-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 BJD13_17655 6ffbc61f944fead70a06049f918bb2ad 177 PRINTS PR01171 Bacterial lipocalin signature 33 47 2.2E-9 T 17-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 BJD13_17655 6ffbc61f944fead70a06049f918bb2ad 177 PRINTS PR01171 Bacterial lipocalin signature 50 66 2.2E-9 T 17-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 BJD13_17655 6ffbc61f944fead70a06049f918bb2ad 177 PRINTS PR01171 Bacterial lipocalin signature 104 118 2.2E-9 T 17-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 BJD13_17655 6ffbc61f944fead70a06049f918bb2ad 177 PRINTS PR01171 Bacterial lipocalin signature 163 173 2.2E-9 T 17-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 BJD13_17655 6ffbc61f944fead70a06049f918bb2ad 177 PIRSF PIRSF036893 1 177 4.7E-41 T 17-10-2018 IPR022271 Lipocalin, ApoD type BJD13_17655 6ffbc61f944fead70a06049f918bb2ad 177 Pfam PF08212 Lipocalin-like domain 33 174 1.2E-43 T 17-10-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain BJD13_17655 6ffbc61f944fead70a06049f918bb2ad 177 SUPERFAMILY SSF50814 7 174 1.31E-31 T 17-10-2018 IPR012674 Calycin BJD13_15335 de65a21c36e7db548ce6fc2dba33e387 318 ProDom PD024513 PERMEASE 2-KETO-3-DEOXYGLUCONATE MEMBRANE TRANSMEMBRANE SUGAR KDG SYMPORT INNER 2-KETO-3-DEOXY-D-GLUCONATE SYSTEM 23 317 3.0E-108 T 17-10-2018 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 BJD13_15335 de65a21c36e7db548ce6fc2dba33e387 318 Pfam PF03812 2-keto-3-deoxygluconate permease 3 312 3.3E-110 T 17-10-2018 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 BJD13_15335 de65a21c36e7db548ce6fc2dba33e387 318 Hamap MF_00070 2-keto-3-deoxygluconate permease [kdgT]. 1 318 35.503 T 17-10-2018 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 BJD13_15335 de65a21c36e7db548ce6fc2dba33e387 318 TIGRFAM TIGR00793 kdgT: 2-keto-3-deoxygluconate transporter 1 312 1.7E-141 T 17-10-2018 IPR018395 2-keto-3-deoxygluconate permease, subgroup GO:0008643|GO:0015649|GO:0016021|GO:0046411 BJD13_15600 8f0a7d1f59d900b3d3cccb04aeb4daa9 342 Pfam PF16884 N-terminal domain of oxidoreductase 7 109 4.6E-35 T 17-10-2018 BJD13_15600 8f0a7d1f59d900b3d3cccb04aeb4daa9 342 Gene3D G3DSA:3.40.50.720 129 310 6.8E-122 T 17-10-2018 BJD13_15600 8f0a7d1f59d900b3d3cccb04aeb4daa9 342 SUPERFAMILY SSF50129 5 146 8.08E-39 T 17-10-2018 IPR011032 GroES-like superfamily BJD13_15600 8f0a7d1f59d900b3d3cccb04aeb4daa9 342 Gene3D G3DSA:3.90.180.10 12 339 6.8E-122 T 17-10-2018 BJD13_15600 8f0a7d1f59d900b3d3cccb04aeb4daa9 342 Pfam PF00107 Zinc-binding dehydrogenase 161 298 5.6E-19 T 17-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 BJD13_15600 8f0a7d1f59d900b3d3cccb04aeb4daa9 342 SUPERFAMILY SSF51735 127 305 3.61E-43 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_15600 8f0a7d1f59d900b3d3cccb04aeb4daa9 342 SMART SM00829 20 339 4.2E-7 T 17-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 BJD13_01975 1f315021e637be886eacf41f8cb3e564 155 SUPERFAMILY SSF82199 4 148 1.57E-42 T 17-10-2018 BJD13_01975 1f315021e637be886eacf41f8cb3e564 155 SMART SM00317 3 128 3.1E-31 T 17-10-2018 IPR001214 SET domain GO:0005515 BJD13_01975 1f315021e637be886eacf41f8cb3e564 155 Pfam PF00856 SET domain 14 122 1.4E-19 T 17-10-2018 IPR001214 SET domain GO:0005515 BJD13_01975 1f315021e637be886eacf41f8cb3e564 155 Gene3D G3DSA:2.170.270.10 1 155 4.5E-44 T 17-10-2018 BJD13_08035 2da2a38f4496c7642be5d4048efa8224 501 Gene3D G3DSA:3.40.50.1820 62 481 1.2E-22 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_08035 2da2a38f4496c7642be5d4048efa8224 501 SUPERFAMILY SSF53474 54 487 7.48E-72 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_08035 2da2a38f4496c7642be5d4048efa8224 501 ProSitePatterns PS00131 Serine carboxypeptidases, serine active site. 206 213 - T 17-10-2018 IPR018202 Serine carboxypeptidase, serine active site BJD13_08035 2da2a38f4496c7642be5d4048efa8224 501 Pfam PF00450 Serine carboxypeptidase 93 468 1.1E-18 T 17-10-2018 IPR001563 Peptidase S10, serine carboxypeptidase GO:0004185|GO:0006508 BJD13_05555 9ddf8e493617516545a72cef0dab6d98 190 Gene3D G3DSA:1.10.357.10 2 186 4.1E-22 T 17-10-2018 BJD13_05555 9ddf8e493617516545a72cef0dab6d98 190 SUPERFAMILY SSF46689 6 63 6.31E-5 T 17-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BJD13_05340 bb2de92d04359e099f6b67d99dfc91d2 82 Pfam PF03937 Flavinator of succinate dehydrogenase 8 77 3.6E-23 T 17-10-2018 IPR005631 Flavinator of succinate dehydrogenase BJD13_05340 bb2de92d04359e099f6b67d99dfc91d2 82 SUPERFAMILY SSF109910 3 79 3.92E-23 T 17-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily BJD13_05340 bb2de92d04359e099f6b67d99dfc91d2 82 Gene3D G3DSA:1.10.150.250 1 81 6.3E-26 T 17-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily BJD13_10830 a4484c7da37f68c5b5571a65370a761a 601 Gene3D G3DSA:1.50.10.10 237 601 1.1E-59 T 17-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 BJD13_10830 a4484c7da37f68c5b5571a65370a761a 601 Pfam PF00723 Glycosyl hydrolases family 15 237 559 5.8E-28 T 17-10-2018 IPR011613 GH15-like domain Reactome: R-HSA-70221 BJD13_10830 a4484c7da37f68c5b5571a65370a761a 601 SUPERFAMILY SSF48208 224 594 8.93E-75 T 17-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 BJD13_19000 af97787e6e5755c0fdc28c303cdaa989 180 Gene3D G3DSA:3.40.50.300 5 173 9.7E-16 T 17-10-2018 BJD13_19000 af97787e6e5755c0fdc28c303cdaa989 180 SUPERFAMILY SSF52540 7 173 2.26E-17 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_21985 272ea77fa5e895d6ccad4dcf32c42e8b 294 Pfam PF01062 Bestrophin, RFP-TM, chloride channel 12 267 5.1E-40 T 17-10-2018 IPR021134 Bestrophin/UPF0187 Reactome: R-HSA-2672351 BJD13_16260 8276b0bde714b07072cbe7e9a7f6d487 273 Gene3D G3DSA:3.90.850.10 11 269 4.5E-53 T 17-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 BJD13_16260 8276b0bde714b07072cbe7e9a7f6d487 273 SUPERFAMILY SSF56529 12 268 2.22E-37 T 17-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 BJD13_11910 f6bc30cbe3da7ec191cf63cce86ad271 99 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 21.929 T 17-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 BJD13_11910 f6bc30cbe3da7ec191cf63cce86ad271 99 Pfam PF00276 Ribosomal protein L23 10 95 1.5E-28 T 17-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 BJD13_11910 f6bc30cbe3da7ec191cf63cce86ad271 99 SUPERFAMILY SSF54189 6 97 6.12E-28 T 17-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 BJD13_11910 f6bc30cbe3da7ec191cf63cce86ad271 99 Gene3D G3DSA:3.30.70.330 1 99 1.5E-32 T 17-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily BJD13_08865 0ffcd5bd8bb1e56b5f9839e5fbee4bce 78 Gene3D G3DSA:1.20.5.300 1 58 1.5E-31 T 17-10-2018 BJD13_08865 0ffcd5bd8bb1e56b5f9839e5fbee4bce 78 Hamap MF_00715 Protein SlyX [slyX]. 11 78 15.699 T 17-10-2018 IPR007236 SlyX BJD13_08865 0ffcd5bd8bb1e56b5f9839e5fbee4bce 78 Pfam PF04102 SlyX 12 78 4.6E-16 T 17-10-2018 IPR007236 SlyX BJD13_00675 d74996b5b7eee6fae73bc33d3c9adf85 429 Pfam PF03743 Bacterial conjugation TrbI-like protein 226 419 5.6E-32 T 17-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI BJD13_14395 5f38b567dda499a4971be8edafba2274 208 Pfam PF13548 Domain of unknown function (DUF4126) 9 175 6.2E-44 T 17-10-2018 IPR025196 Domain of unknown function DUF4126 BJD13_21175 87a2ee845ef0d4836d92c273c25ccdd3 462 Gene3D G3DSA:3.40.50.1000 1 168 4.2E-9 T 17-10-2018 IPR023214 HAD superfamily BJD13_21175 87a2ee845ef0d4836d92c273c25ccdd3 462 Pfam PF01040 UbiA prenyltransferase family 196 433 9.3E-22 T 17-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 BJD13_21175 87a2ee845ef0d4836d92c273c25ccdd3 462 Gene3D G3DSA:1.10.357.140 184 329 1.4E-10 T 17-10-2018 BJD13_21175 87a2ee845ef0d4836d92c273c25ccdd3 462 SUPERFAMILY SSF56784 1 151 2.61E-9 T 17-10-2018 IPR036412 HAD-like superfamily BJD13_00190 b40128a7b9d6b96bd918e9d2990449eb 374 Pfam PF05275 Copper resistance protein B precursor (CopB) 170 374 3.8E-88 T 17-10-2018 IPR007939 Copper resistance B precursor GO:0005507|GO:0006878|GO:0009279 BJD13_13055 ccd4aa732b6049fef25176654320a5c5 91 Pfam PF02583 Metal-sensitive transcriptional repressor 7 83 1.4E-19 T 17-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 BJD13_13055 ccd4aa732b6049fef25176654320a5c5 91 Gene3D G3DSA:1.20.58.1000 1 91 6.7E-30 T 17-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily BJD13_22690 e327d441e513b055570c350e31e9b21d 287 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 210 221 4.1E-21 T 17-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial BJD13_22690 e327d441e513b055570c350e31e9b21d 287 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 222 237 4.1E-21 T 17-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial BJD13_22690 e327d441e513b055570c350e31e9b21d 287 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 199 209 4.1E-21 T 17-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial BJD13_22690 e327d441e513b055570c350e31e9b21d 287 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 142 159 4.1E-21 T 17-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial BJD13_22690 e327d441e513b055570c350e31e9b21d 287 Pfam PF01478 Type IV leader peptidase family 133 241 1.0E-23 T 17-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 BJD13_22690 e327d441e513b055570c350e31e9b21d 287 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 18 123 5.2E-27 T 17-10-2018 IPR010627 Peptidase A24A, N-terminal BJD13_05525 46caf6a5bb9f593df4a48b1db85b0ba9 605 Pfam PF11737 Protein of unknown function (DUF3300) 57 321 1.3E-62 T 17-10-2018 IPR021728 Protein of unknown function DUF3300 BJD13_08380 90e837af5418a5b6fd6ba411bcfd80f3 332 SUPERFAMILY SSF52980 46 153 1.55E-5 T 17-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 BJD13_08380 90e837af5418a5b6fd6ba411bcfd80f3 332 Pfam PF04471 Restriction endonuclease 44 150 6.4E-10 T 17-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 BJD13_20955 a3c1414037dc4c84f861de3191d18b42 408 Pfam PF12704 MacB-like periplasmic core domain 51 249 2.0E-10 T 17-10-2018 IPR025857 MacB-like periplasmic core domain BJD13_20955 a3c1414037dc4c84f861de3191d18b42 408 Pfam PF02687 FtsX-like permease family 315 398 3.5E-9 T 17-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 BJD13_21030 e30b78587a6dc77699fb029d30bd7f47 235 Gene3D G3DSA:2.30.30.40 27 81 1.8E-5 T 17-10-2018 BJD13_21030 e30b78587a6dc77699fb029d30bd7f47 235 Pfam PF08239 Bacterial SH3 domain 32 77 2.5E-6 T 17-10-2018 IPR003646 SH3-like domain, bacterial-type BJD13_14895 4be39d647fd92811c3611b14041e73ce 357 Gene3D G3DSA:3.40.1690.10 212 350 3.8E-48 T 17-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal BJD13_14895 4be39d647fd92811c3611b14041e73ce 357 Pfam PF01312 FlhB HrpN YscU SpaS Family 3 341 1.2E-105 T 17-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BJD13_14895 4be39d647fd92811c3611b14041e73ce 357 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 297 318 4.3E-38 T 17-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BJD13_14895 4be39d647fd92811c3611b14041e73ce 357 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 6 28 4.3E-38 T 17-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BJD13_14895 4be39d647fd92811c3611b14041e73ce 357 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 267 282 4.3E-38 T 17-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BJD13_14895 4be39d647fd92811c3611b14041e73ce 357 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 203 221 4.3E-38 T 17-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BJD13_14895 4be39d647fd92811c3611b14041e73ce 357 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 223 240 4.3E-38 T 17-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BJD13_14895 4be39d647fd92811c3611b14041e73ce 357 SUPERFAMILY SSF160544 239 344 1.7E-31 T 17-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal BJD13_14895 4be39d647fd92811c3611b14041e73ce 357 TIGRFAM TIGR01404 FlhB_rel_III: type III secretion protein, YscU/HrpY family 3 343 1.4E-101 T 17-10-2018 IPR006307 Type III exporter system, secretion apparatus protein BsaZ GO:0009306|GO:0016021 BJD13_16320 58327e0993be1174c1342c25abc3b943 136 Pfam PF14106 Domain of unknown function (DUF4279) 14 127 1.0E-19 T 17-10-2018 IPR025459 Protein of unknown function DUF4279 BJD13_11240 6def61530767b5c6f11671bca7dac9fa 339 Pfam PF02601 Exonuclease VII, large subunit 177 317 1.7E-9 T 17-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 BJD13_07420 642c3d2739d7578ba50ebd8811df67c0 289 Gene3D G3DSA:3.30.930.30 2 197 3.1E-47 T 17-10-2018 BJD13_07420 642c3d2739d7578ba50ebd8811df67c0 289 Pfam PF03389 MobA/MobL family 18 200 9.1E-33 T 17-10-2018 IPR005053 MobA/MobL protein BJD13_22840 b6dde6cec890a2d777fe3e9062f35395 157 Pfam PF12098 Protein of unknown function (DUF3574) 48 157 5.3E-34 T 17-10-2018 IPR021957 Protein of unknown function DUF3574 BJD13_16135 2296831ca2bd7dd6e11d05aec86fdb16 89 Gene3D G3DSA:1.10.10.10 3 85 4.1E-29 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_16135 2296831ca2bd7dd6e11d05aec86fdb16 89 Pfam PF11625 Protein of unknown function (DUF3253) 7 84 4.6E-28 T 17-10-2018 IPR021660 Protein of unknown function DUF3253 BJD13_16135 2296831ca2bd7dd6e11d05aec86fdb16 89 SUPERFAMILY SSF46785 5 85 1.41E-24 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_23945 4652b17aefda74f05a3387663f507c72 186 Pfam PF00691 OmpA family 85 176 2.4E-5 T 17-10-2018 IPR006665 OmpA-like domain BJD13_23945 4652b17aefda74f05a3387663f507c72 186 Gene3D G3DSA:3.30.1330.60 59 183 3.3E-11 T 17-10-2018 IPR036737 OmpA-like domain superfamily BJD13_23945 4652b17aefda74f05a3387663f507c72 186 SUPERFAMILY SSF103088 80 183 2.88E-14 T 17-10-2018 IPR036737 OmpA-like domain superfamily BJD13_16505 11c79bb65cf5b6f18c61e5ab16778d8c 542 Gene3D G3DSA:3.30.2290.10 35 234 6.6E-16 T 17-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal BJD13_16505 11c79bb65cf5b6f18c61e5ab16778d8c 542 Pfam PF01523 Putative modulator of DNA gyrase 57 383 1.9E-54 T 17-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 BJD13_16505 11c79bb65cf5b6f18c61e5ab16778d8c 542 SUPERFAMILY SSF111283 41 535 1.57E-89 T 17-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 BJD13_15845 9545fee7f4f2fb16263f74b7cd184295 214 Pfam PF02036 SCP-2 sterol transfer family 21 121 2.6E-15 T 17-10-2018 IPR003033 SCP2 sterol-binding domain BJD13_18495 52a58c9c30ea3625e034edea176b2a17 96 Gene3D G3DSA:2.20.130.30 25 96 2.3E-19 T 17-10-2018 BJD13_18495 52a58c9c30ea3625e034edea176b2a17 96 Pfam PF11191 Protein of unknown function (DUF2782) 33 96 1.4E-15 T 17-10-2018 IPR021357 Protein of unknown function DUF2782 BJD13_17835 8957c492bca5fbede44f4caadc9c1371 261 Gene3D G3DSA:3.30.2010.10 166 247 1.3E-14 T 17-10-2018 BJD13_17835 8957c492bca5fbede44f4caadc9c1371 261 Pfam PF01863 Protein of unknown function DUF45 41 245 3.2E-46 T 17-10-2018 IPR002725 Protein of unknown function DUF45 BJD13_01945 ea078f124352b67b3f423b43afce4ede 179 Gene3D G3DSA:3.40.630.30 1 178 1.2E-25 T 17-10-2018 BJD13_01945 ea078f124352b67b3f423b43afce4ede 179 Pfam PF13673 Acetyltransferase (GNAT) domain 45 145 3.3E-13 T 17-10-2018 IPR000182 GNAT domain BJD13_01945 ea078f124352b67b3f423b43afce4ede 179 SUPERFAMILY SSF55729 1 155 1.01E-27 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD13_12380 3af098f78b542b91cf5081ed1777fd37 275 Gene3D G3DSA:3.90.226.10 1 269 1.2E-68 T 17-10-2018 BJD13_12380 3af098f78b542b91cf5081ed1777fd37 275 SUPERFAMILY SSF52096 4 259 2.41E-69 T 17-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BJD13_12380 3af098f78b542b91cf5081ed1777fd37 275 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 259 5.2E-49 T 17-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 BJD13_21315 4de5896076e979bc074dbb8d926206d4 160 Gene3D G3DSA:3.40.630.30 10 156 2.5E-46 T 17-10-2018 BJD13_21315 4de5896076e979bc074dbb8d926206d4 160 SUPERFAMILY SSF55729 11 153 2.03E-36 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD13_21315 4de5896076e979bc074dbb8d926206d4 160 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 19 150 1.5E-42 T 17-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 BJD13_21315 4de5896076e979bc074dbb8d926206d4 160 Pfam PF00583 Acetyltransferase (GNAT) family 21 128 1.5E-14 T 17-10-2018 IPR000182 GNAT domain BJD13_14355 75986cfe6b08faa17d0f48ff32653652 136 Pfam PF10825 Protein of unknown function (DUF2752) 40 84 1.3E-18 T 17-10-2018 IPR021215 Protein of unknown function DUF2752 BJD13_15485 e47eb09552b8e83225a65ef3d477d5de 437 Pfam PF00860 Permease family 18 399 2.0E-49 T 17-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 BJD13_15485 e47eb09552b8e83225a65ef3d477d5de 437 PIRSF PIRSF005353 4 437 3.9E-166 T 17-10-2018 IPR026033 Purine permease PbuG-like BJD13_20595 8f938f23979722f62ed470d30ab59833 231 SUPERFAMILY SSF53448 3 212 2.34E-34 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD13_20595 8f938f23979722f62ed470d30ab59833 231 Pfam PF00535 Glycosyl transferase family 2 3 133 3.5E-16 T 17-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BJD13_20595 8f938f23979722f62ed470d30ab59833 231 Gene3D G3DSA:3.90.550.10 1 222 4.3E-32 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD13_15775 7661f03d712d1f19e4215705df6f4100 420 Gene3D G3DSA:1.20.1530.20 5 409 3.6E-92 T 17-10-2018 IPR038770 Sodium/solute symporter superfamily BJD13_15775 7661f03d712d1f19e4215705df6f4100 420 Pfam PF00999 Sodium/hydrogen exchanger family 13 401 6.0E-52 T 17-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 BJD13_17500 6f1e47984d97319d41861ccf69f9edc9 393 TIGRFAM TIGR00843 benE: benzoate transporter 12 385 3.7E-127 T 17-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 BJD13_17500 6f1e47984d97319d41861ccf69f9edc9 393 Pfam PF03594 Benzoate membrane transport protein 10 383 6.4E-140 T 17-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 BJD13_02775 6460b4d5d0b83a60bc79f51c15b0a8fa 1306 Pfam PF13116 Protein of unknown function 509 783 4.5E-40 T 17-10-2018 IPR025263 Domain of unknown function DUF3971 BJD13_02775 6460b4d5d0b83a60bc79f51c15b0a8fa 1306 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 10 1286 0.0 T 17-10-2018 IPR011836 Conserved hypothetical protein CHP02099 BJD13_02775 6460b4d5d0b83a60bc79f51c15b0a8fa 1306 Pfam PF13502 AsmA-like C-terminal region 1034 1275 1.1E-58 T 17-10-2018 IPR032712 AsmA-like, C-terminal BJD13_22860 cc37872c97050b945b829eaa839fb342 272 Pfam PF11219 Protein of unknown function (DUF3014) 109 265 3.0E-55 T 17-10-2018 IPR021382 Protein of unknown function DUF3014 BJD13_07135 532b887ae6986a4503304841a1201182 196 Gene3D G3DSA:3.90.79.10 17 195 2.3E-37 T 17-10-2018 BJD13_07135 532b887ae6986a4503304841a1201182 196 SUPERFAMILY SSF55811 59 192 2.44E-16 T 17-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BJD13_07135 532b887ae6986a4503304841a1201182 196 Pfam PF00293 NUDIX domain 66 185 6.4E-7 T 17-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 BJD13_24080 9bd69784ce903d3eabf84d3123759598 324 Pfam PF02661 Fic/DOC family 35 153 8.5E-12 T 17-10-2018 IPR003812 Fido domain BJD13_24080 9bd69784ce903d3eabf84d3123759598 324 Gene3D G3DSA:1.10.3290.10 3 204 5.3E-33 T 17-10-2018 IPR036597 Fido-like domain superfamily BJD13_24080 9bd69784ce903d3eabf84d3123759598 324 SUPERFAMILY SSF140931 13 166 8.89E-18 T 17-10-2018 IPR036597 Fido-like domain superfamily BJD13_10575 6101fc1536252c9d4e6c3ff0a570159c 672 Pfam PF01401 Angiotensin-converting enzyme 41 654 5.4E-190 T 17-10-2018 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 BJD13_10575 6101fc1536252c9d4e6c3ff0a570159c 672 Gene3D G3DSA:1.10.1370.30 407 651 3.0E-6 T 17-10-2018 BJD13_10575 6101fc1536252c9d4e6c3ff0a570159c 672 SUPERFAMILY SSF55486 41 655 4.95E-188 T 17-10-2018 BJD13_16170 8cf83b23775d41a0aed0a4e492c271b6 401 Pfam PF00487 Fatty acid desaturase 20 242 5.6E-12 T 17-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 BJD13_18190 57e856ecb3b1238a93a3fafb1881b342 605 Pfam PF05960 Bacterial protein of unknown function (DUF885) 70 583 5.1E-155 T 17-10-2018 IPR010281 Protein of unknown function DUF885 BJD13_23320 e1f95644807ee0e1935f4bcae3e26d3d 299 Pfam PF12706 Beta-lactamase superfamily domain 50 265 5.9E-51 T 17-10-2018 IPR001279 Metallo-beta-lactamase BJD13_23320 e1f95644807ee0e1935f4bcae3e26d3d 299 TIGRFAM TIGR02108 PQQ_syn_pqqB: coenzyme PQQ biosynthesis protein B 2 299 3.2E-135 T 17-10-2018 IPR011842 Coenzyme PQQ biosynthesis protein B BJD13_23320 e1f95644807ee0e1935f4bcae3e26d3d 299 Gene3D G3DSA:3.60.15.10 1 299 9.4E-82 T 17-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BJD13_23320 e1f95644807ee0e1935f4bcae3e26d3d 299 SUPERFAMILY SSF56281 1 299 1.32E-51 T 17-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BJD13_23320 e1f95644807ee0e1935f4bcae3e26d3d 299 Hamap MF_00653 Coenzyme PQQ synthesis protein B [pqqB]. 1 299 145.546 T 17-10-2018 IPR011842 Coenzyme PQQ biosynthesis protein B BJD13_05370 74531d10a70bf953437e7f69b54cb57d 220 Pfam PF01618 MotA/TolQ/ExbB proton channel family 67 187 3.3E-30 T 17-10-2018 IPR002898 MotA/TolQ/ExbB proton channel BJD13_05150 23bf85c8c26edbc048dc231d00f274a4 169 Pfam PF06853 Protein of unknown function (DUF1249) 31 145 1.9E-27 T 17-10-2018 IPR009659 Protein of unknown function DUF1249 BJD13_01505 e2c968655e1d9887396ef551ae181921 856 Pfam PF05872 Bacterial protein of unknown function (DUF853) 626 703 1.5E-4 T 17-10-2018 IPR033186 Helicase HerA-like C-terminal BJD13_01505 e2c968655e1d9887396ef551ae181921 856 SUPERFAMILY SSF52540 433 766 4.7E-45 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_01505 e2c968655e1d9887396ef551ae181921 856 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 184 398 1.5E-10 T 17-10-2018 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 BJD13_01505 e2c968655e1d9887396ef551ae181921 856 Gene3D G3DSA:3.40.50.300 581 781 8.7E-25 T 17-10-2018 BJD13_08755 0e30f4ef68916a0441576ef64b44fc62 135 Gene3D G3DSA:3.10.450.160 63 135 7.8E-13 T 17-10-2018 BJD13_08755 0e30f4ef68916a0441576ef64b44fc62 135 ProDom PD456999 SIGNAL PRECURSOR TRANSMEMBRANE MEMBRANE YOHN INTEGRAL EXPORTED SIMILAR LIPOPROTEIN LIPOPROTEIN 85 132 6.0E-22 T 17-10-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB BJD13_08755 0e30f4ef68916a0441576ef64b44fc62 135 Pfam PF11776 Nickel/cobalt transporter regulator 82 130 1.0E-18 T 17-10-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB BJD13_10985 852337c4e231019a44b624e411f3ab54 315 Pfam PF16387 Domain of unknown function 216 308 1.1E-13 T 17-10-2018 IPR032160 Domain of unknown function DUF4996 BJD13_10985 852337c4e231019a44b624e411f3ab54 315 SUPERFAMILY SSF51695 43 309 1.75E-43 T 17-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 BJD13_10985 852337c4e231019a44b624e411f3ab54 315 Gene3D G3DSA:3.20.20.190 27 314 4.2E-74 T 17-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 BJD13_10985 852337c4e231019a44b624e411f3ab54 315 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 47 171 1.9E-21 T 17-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 BJD13_20480 13448d1b70490171ae4c595f42a9109e 340 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 7 215 4.5E-44 T 17-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 BJD13_20480 13448d1b70490171ae4c595f42a9109e 340 PIRSF PIRSF000267 3 340 4.6E-88 T 17-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 BJD13_20480 13448d1b70490171ae4c595f42a9109e 340 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 326 6.8E-95 T 17-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 BJD13_18745 753e75a85ee8c6785e29d84231d89546 263 Pfam PF01061 ABC-2 type transporter 16 225 4.6E-35 T 17-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 BJD13_18745 753e75a85ee8c6785e29d84231d89546 263 PRINTS PR00164 ABC-2 type transport system membrane protein signature 183 202 2.2E-5 T 17-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 BJD13_18745 753e75a85ee8c6785e29d84231d89546 263 PRINTS PR00164 ABC-2 type transport system membrane protein signature 65 87 2.2E-5 T 17-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 BJD13_18745 753e75a85ee8c6785e29d84231d89546 263 PRINTS PR00164 ABC-2 type transport system membrane protein signature 109 134 2.2E-5 T 17-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 BJD13_18745 753e75a85ee8c6785e29d84231d89546 263 PIRSF PIRSF006648 1 260 9.2E-29 T 17-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 BJD13_12530 ca62a8b5da19946ac3ad518851ce0654 233 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 72 221 3.8E-15 T 17-10-2018 IPR013830 SGNH hydrolase-type esterase domain BJD13_12530 ca62a8b5da19946ac3ad518851ce0654 233 SUPERFAMILY SSF52266 32 232 1.15E-45 T 17-10-2018 BJD13_12530 ca62a8b5da19946ac3ad518851ce0654 233 Gene3D G3DSA:3.40.50.1110 22 232 3.2E-37 T 17-10-2018 IPR036514 SGNH hydrolase superfamily BJD13_12300 48ec93f89ce5918a548746a6756488d6 76 Pfam PF09413 Putative prokaryotic signal transducing protein 1 66 2.9E-12 T 17-10-2018 IPR018551 Domain of unknown function DUF2007 BJD13_08145 03942cdb28ddde406ab3b9ca6cebdf0b 316 Pfam PF00535 Glycosyl transferase family 2 17 130 8.1E-21 T 17-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BJD13_08145 03942cdb28ddde406ab3b9ca6cebdf0b 316 Gene3D G3DSA:3.90.550.10 2 253 1.4E-49 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD13_08145 03942cdb28ddde406ab3b9ca6cebdf0b 316 SUPERFAMILY SSF53448 11 245 8.16E-47 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD13_06780 4dcb5225c6fe6b35a658c3652f180569 246 Pfam PF01618 MotA/TolQ/ExbB proton channel family 103 219 2.2E-24 T 17-10-2018 IPR002898 MotA/TolQ/ExbB proton channel BJD13_17435 1f408509606a16d38486b81f31c5ec8d 69 Pfam PF07869 Protein of unknown function (DUF1656) 4 58 3.4E-21 T 17-10-2018 IPR012451 Protein of unknown function DUF1656 BJD13_19145 0c3683e6cccf13a01cadb494aa940826 368 Pfam PF01594 AI-2E family transporter 33 354 1.1E-43 T 17-10-2018 IPR002549 Transmembrane protein TqsA-like BJD13_10490 49d0e2b04f98ad290355336781327e1d 265 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 140 263 1.6E-35 T 17-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 BJD13_10490 49d0e2b04f98ad290355336781327e1d 265 SUPERFAMILY SSF55166 137 262 5.76E-24 T 17-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 BJD13_10490 49d0e2b04f98ad290355336781327e1d 265 Gene3D G3DSA:3.30.1380.10 108 264 1.1E-33 T 17-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 BJD13_02515 32541e285dc2dce4786f8db83d36ff45 178 Pfam PF13211 Protein of unknown function (DUF4019) 65 171 2.5E-28 T 17-10-2018 IPR025091 Protein of unknown function DUF4019 BJD13_03695 ae76b8e171629e2f914efe98649bafeb 225 SUPERFAMILY SSF69318 45 116 3.01E-5 T 17-10-2018 BJD13_02680 ff071fa18029fef12d0ba17db286be31 80 Pfam PF04070 Domain of unknown function (DUF378) 2 61 3.5E-27 T 17-10-2018 IPR007211 Protein of unknown function DUF378 BJD13_09425 fa21a4713d5fea6dae1d55f673090bcd 174 SMART SM00972 111 171 5.9E-22 T 17-10-2018 IPR007893 Spore coat protein U BJD13_09425 fa21a4713d5fea6dae1d55f673090bcd 174 Pfam PF05229 Spore Coat Protein U domain 25 171 1.8E-34 T 17-10-2018 IPR007893 Spore coat protein U BJD13_23025 4d26061aa9a157befdcb7d5e989ae4e9 141 Gene3D G3DSA:3.10.180.10 1 129 1.9E-33 T 17-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD13_23025 4d26061aa9a157befdcb7d5e989ae4e9 141 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 12 123 1.4E-10 T 17-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BJD13_23025 4d26061aa9a157befdcb7d5e989ae4e9 141 SUPERFAMILY SSF54593 12 129 2.55E-21 T 17-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD13_03315 ac24ca1b18316b176e3d5166d754857c 190 Pfam PF13681 Type IV pilus assembly protein PilX C-term 84 187 2.3E-8 T 17-10-2018 IPR025205 PilX/PilW C-terminal domain BJD13_03315 ac24ca1b18316b176e3d5166d754857c 190 Pfam PF14341 PilX N-terminal 12 61 1.7E-14 T 17-10-2018 IPR025746 Type 4 fimbrial biogenesis protein PilX, N-terminal domain BJD13_03835 fea436678f2b178d24e2fd45254cbe92 791 SUPERFAMILY SSF48208 103 409 4.53E-10 T 17-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 BJD13_03835 fea436678f2b178d24e2fd45254cbe92 791 Pfam PF07944 Beta-L-arabinofuranosidase, GH127 56 570 2.7E-166 T 17-10-2018 IPR012878 Beta-L-arabinofuranosidase, GH127 BJD13_19060 4f3dd958f599252d49d9b9b866671ed0 157 Gene3D G3DSA:1.10.890.40 66 142 6.8E-13 T 17-10-2018 BJD13_09830 a47ad0a45d0282f543e4df1c79a8a6b4 209 Gene3D G3DSA:3.30.2010.10 125 204 3.1E-6 T 17-10-2018 BJD13_09830 a47ad0a45d0282f543e4df1c79a8a6b4 209 Pfam PF01863 Protein of unknown function DUF45 139 197 2.3E-12 T 17-10-2018 IPR002725 Protein of unknown function DUF45 BJD13_04925 519371bb5c461699e1a7450274c5bf06 101 Pfam PF06305 Lipopolysaccharide assembly protein A domain 23 79 6.2E-8 T 17-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 BJD13_17720 5a368ae89622c5e586a132086c52811b 305 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 36 305 6.4E-10 T 17-10-2018 IPR010239 Conserved hypothetical protein CHP02001 BJD13_17420 25c98a2cf9f7747a4afb66878056a1bb 765 Pfam PF04632 Fusaric acid resistance protein family 10 361 4.6E-104 T 17-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 BJD13_02155 8451960e429f8ed006396cf11ad19d66 334 Pfam PF02625 XdhC and CoxI family 34 101 8.3E-24 T 17-10-2018 IPR003777 XdhC- CoxI BJD13_02155 8451960e429f8ed006396cf11ad19d66 334 Pfam PF13478 XdhC Rossmann domain 179 319 9.6E-22 T 17-10-2018 IPR027051 XdhC Rossmann domain BJD13_02155 8451960e429f8ed006396cf11ad19d66 334 Gene3D G3DSA:3.40.50.720 178 324 7.4E-23 T 17-10-2018 BJD13_08625 c0fe4c8ac41979e63cc744222d6639d7 318 Pfam PF06189 5'-nucleotidase 39 316 4.0E-107 T 17-10-2018 IPR010394 5-nucleotidase GO:0000166|GO:0000287|GO:0005737|GO:0008253|GO:0009117 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821|Reactome: R-HSA-74259 BJD13_20430 b3fc6bfb80f61d9cf2c8e2db621156ab 204 Pfam PF13628 Domain of unknown function (DUF4142) 62 196 7.9E-20 T 17-10-2018 IPR025419 Domain of unknown function DUF4142 BJD13_20690 db76bd7053497798f6899e1155ac18e7 162 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 86 148 3.2E-10 T 17-10-2018 IPR018660 C-type lysozyme inhibitor BJD13_20690 db76bd7053497798f6899e1155ac18e7 162 Gene3D G3DSA:2.40.128.200 80 158 2.5E-14 T 17-10-2018 IPR036328 C-type lysozyme inhibitor superfamily BJD13_20690 db76bd7053497798f6899e1155ac18e7 162 SUPERFAMILY SSF141488 80 154 1.26E-16 T 17-10-2018 IPR036328 C-type lysozyme inhibitor superfamily BJD13_06840 0c9da70e1fea562e1ba7c6e2d4297232 253 Pfam PF13557 Putative MetA-pathway of phenol degradation 27 253 2.3E-18 T 17-10-2018 IPR025737 MetA-pathway of phenol degradation, putative BJD13_08130 847a1215a3c80743a8d26086937fc67c 280 Gene3D G3DSA:3.40.50.150 35 280 4.9E-34 T 17-10-2018 BJD13_08130 847a1215a3c80743a8d26086937fc67c 280 Pfam PF13649 Methyltransferase domain 65 159 9.2E-17 T 17-10-2018 BJD13_08130 847a1215a3c80743a8d26086937fc67c 280 SUPERFAMILY SSF53335 22 280 3.19E-35 T 17-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BJD13_11005 4392aa49d51b226298daf34db833f57b 332 Gene3D G3DSA:3.90.245.10 28 330 2.2E-58 T 17-10-2018 IPR036452 Ribonucleoside hydrolase-like BJD13_11005 4392aa49d51b226298daf34db833f57b 332 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 41 321 1.5E-44 T 17-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain BJD13_11005 4392aa49d51b226298daf34db833f57b 332 SUPERFAMILY SSF53590 41 328 1.27E-53 T 17-10-2018 IPR036452 Ribonucleoside hydrolase-like BJD13_09555 132aa2d6e21df4cf743a3a1e5db0b176 148 PIRSF PIRSF004638 1 148 9.9E-41 T 17-10-2018 IPR005265 Uncharacterised protein family UPF0093 BJD13_09555 132aa2d6e21df4cf743a3a1e5db0b176 148 Pfam PF03653 Uncharacterised protein family (UPF0093) 2 148 3.6E-40 T 17-10-2018 IPR005265 Uncharacterised protein family UPF0093 BJD13_17400 873883f2446d08d28e122d27ffbb5f02 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 5.8E-19 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_17400 873883f2446d08d28e122d27ffbb5f02 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 5.8E-19 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_17400 873883f2446d08d28e122d27ffbb5f02 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 5.8E-19 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_17400 873883f2446d08d28e122d27ffbb5f02 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 5.8E-19 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_17400 873883f2446d08d28e122d27ffbb5f02 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 5.8E-19 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_17400 873883f2446d08d28e122d27ffbb5f02 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 1.4E-7 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_17400 873883f2446d08d28e122d27ffbb5f02 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 1.4E-7 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_17400 873883f2446d08d28e122d27ffbb5f02 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 1.4E-7 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_17400 873883f2446d08d28e122d27ffbb5f02 277 SUPERFAMILY SSF51735 3 216 6.57E-56 T 17-10-2018 IPR036291 NAD(P)-binding domain superfamily BJD13_17400 873883f2446d08d28e122d27ffbb5f02 277 Gene3D G3DSA:3.40.50.720 2 275 1.7E-66 T 17-10-2018 BJD13_17400 873883f2446d08d28e122d27ffbb5f02 277 Pfam PF00106 short chain dehydrogenase 3 188 4.3E-44 T 17-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BJD13_12420 285c43791962584c75fa466757e838d4 143 Pfam PF13577 SnoaL-like domain 10 132 7.1E-16 T 17-10-2018 IPR037401 SnoaL-like domain BJD13_12420 285c43791962584c75fa466757e838d4 143 Gene3D G3DSA:3.10.450.50 3 140 1.5E-23 T 17-10-2018 BJD13_12420 285c43791962584c75fa466757e838d4 143 SUPERFAMILY SSF54427 1 136 4.3E-24 T 17-10-2018 IPR032710 NTF2-like domain superfamily BJD13_22800 c399e8913b49c01f34a9fd2b6b8bc5e8 174 Pfam PF13761 Domain of unknown function (DUF4166) 16 171 1.3E-31 T 17-10-2018 IPR025311 Domain of unknown function DUF4166 BJD13_13580 39ce808f3b8944491e7d00f3fc503dbe 113 SUPERFAMILY SSF54593 36 111 6.48E-7 T 17-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD13_13580 39ce808f3b8944491e7d00f3fc503dbe 113 Gene3D G3DSA:3.10.180.10 2 108 3.2E-10 T 17-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD13_21360 d9bf86e230e7008303471a79399ff8a1 360 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 4 349 1.8E-112 T 17-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 BJD13_21360 d9bf86e230e7008303471a79399ff8a1 360 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 348 8.6E-70 T 17-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 BJD13_02770 3876d55eec435d334643d4ef1a562cbe 499 Pfam PF10150 Ribonuclease E/G family 132 403 5.1E-103 T 17-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 BJD13_02770 3876d55eec435d334643d4ef1a562cbe 499 SUPERFAMILY SSF50249 39 136 7.25E-16 T 17-10-2018 IPR012340 Nucleic acid-binding, OB-fold BJD13_02770 3876d55eec435d334643d4ef1a562cbe 499 SMART SM00316 37 130 4.5E-5 T 17-10-2018 IPR022967 RNA-binding domain, S1 BJD13_02770 3876d55eec435d334643d4ef1a562cbe 499 Gene3D G3DSA:2.40.50.140 32 135 4.9E-29 T 17-10-2018 BJD13_02770 3876d55eec435d334643d4ef1a562cbe 499 Gene3D G3DSA:3.40.1260.20 412 498 8.0E-7 T 17-10-2018 BJD13_02770 3876d55eec435d334643d4ef1a562cbe 499 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 436 2.5E-154 T 17-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 BJD13_16700 016192e2c6f7a12b3c681171f45feabb 100 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 88 6.3E-16 T 17-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family BJD13_16700 016192e2c6f7a12b3c681171f45feabb 100 Gene3D G3DSA:3.30.2310.20 1 96 4.3E-15 T 17-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily BJD13_07620 f56920a3556a365b4a840bf47242cf58 651 Pfam PF05787 Bacterial protein of unknown function (DUF839) 201 556 4.0E-16 T 17-10-2018 IPR008557 Protein of unknown function DUF839 BJD13_01660 4ded06c80dfbb1d45936bf593bc5e003 465 SUPERFAMILY SSF50494 232 462 5.01E-38 T 17-10-2018 IPR009003 Peptidase S1, PA clan BJD13_01660 4ded06c80dfbb1d45936bf593bc5e003 465 Gene3D G3DSA:2.40.10.10 230 453 1.7E-49 T 17-10-2018 BJD13_01660 4ded06c80dfbb1d45936bf593bc5e003 465 Pfam PF13365 Trypsin-like peptidase domain 268 422 8.1E-8 T 17-10-2018 BJD13_01660 4ded06c80dfbb1d45936bf593bc5e003 465 Gene3D G3DSA:2.40.10.10 254 454 1.7E-49 T 17-10-2018 BJD13_23905 8fdcede4699c3c5fffdbc8872be4df19 234 Pfam PF11740 Plasmid replication region DNA-binding N-term 8 119 1.5E-15 T 17-10-2018 IPR021104 KfrA, N-terminal DNA-binding domain BJD13_01090 01f29f1783ad1d8a8f4257717be7c9f5 88 TIGRFAM TIGR04359 TrbK_RP4: entry exclusion lipoprotein TrbK 4 75 8.7E-23 T 17-10-2018 IPR027584 Entry exclusion lipoprotein TrbK BJD13_01230 01f29f1783ad1d8a8f4257717be7c9f5 88 TIGRFAM TIGR04359 TrbK_RP4: entry exclusion lipoprotein TrbK 4 75 8.7E-23 T 17-10-2018 IPR027584 Entry exclusion lipoprotein TrbK BJD13_12830 b633e3a9354582929bf487a7301e1712 458 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 19 372 6.7E-126 T 17-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BJD13_12830 b633e3a9354582929bf487a7301e1712 458 Hamap MF_00913 Probable peptidoglycan glycosyltransferase FtsW [ftsW]. 17 381 39.359 T 17-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BJD13_12830 b633e3a9354582929bf487a7301e1712 458 Pfam PF01098 Cell cycle protein 24 373 1.1E-98 T 17-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BJD13_05145 faa21d6c4a9d5e6a728190d33dd7b915 273 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 4 272 70.938 T 17-10-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein BJD13_05145 faa21d6c4a9d5e6a728190d33dd7b915 273 Pfam PF03618 Kinase/pyrophosphorylase 7 263 4.6E-71 T 17-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 BJD13_20635 de114732497bde449b99241f93f87423 185 SMART SM00554 75 185 8.7E-25 T 17-10-2018 IPR000782 FAS1 domain BJD13_20635 de114732497bde449b99241f93f87423 185 SUPERFAMILY SSF82153 40 185 3.53E-42 T 17-10-2018 IPR036378 FAS1 domain superfamily BJD13_20635 de114732497bde449b99241f93f87423 185 Pfam PF02469 Fasciclin domain 51 185 2.5E-34 T 17-10-2018 IPR000782 FAS1 domain BJD13_20635 de114732497bde449b99241f93f87423 185 Gene3D G3DSA:2.30.180.10 14 185 1.3E-47 T 17-10-2018 IPR036378 FAS1 domain superfamily BJD13_02610 1e6532c31340d3fb28692f58ae7025de 278 Pfam PF06629 MltA-interacting protein MipA 52 277 2.0E-30 T 17-10-2018 IPR010583 MltA-interacting MipA BJD13_16720 99192980cde9da3ca51a44150e83d401 485 SUPERFAMILY SSF53098 289 469 3.92E-23 T 17-10-2018 IPR012337 Ribonuclease H-like superfamily BJD13_16720 99192980cde9da3ca51a44150e83d401 485 Pfam PF13482 RNase_H superfamily 294 468 9.9E-40 T 17-10-2018 IPR038720 YprB, ribonuclease H-like domain BJD13_04715 6e2d9db80f83e17e79a5092d46590782 36 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 28 1.6E-18 T 17-10-2018 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 BJD13_04715 6e2d9db80f83e17e79a5092d46590782 36 Pfam PF08173 Membrane bound YbgT-like protein 1 27 1.6E-14 T 17-10-2018 IPR012994 Membrane bound YbgT-like BJD13_09270 9e7edaf259bf11859209d1ad27070477 259 Gene3D G3DSA:2.40.30.10 1 97 9.5E-30 T 17-10-2018 BJD13_09270 9e7edaf259bf11859209d1ad27070477 259 SUPERFAMILY SSF63380 8 100 8.6E-25 T 17-10-2018 IPR017938 Riboflavin synthase-like beta-barrel BJD13_09270 9e7edaf259bf11859209d1ad27070477 259 Pfam PF00970 Oxidoreductase FAD-binding domain 19 98 1.7E-6 T 17-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 BJD13_09270 9e7edaf259bf11859209d1ad27070477 259 SUPERFAMILY SSF52343 104 257 8.38E-40 T 17-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BJD13_09270 9e7edaf259bf11859209d1ad27070477 259 Pfam PF00175 Oxidoreductase NAD-binding domain 113 229 1.7E-7 T 17-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 BJD13_09270 9e7edaf259bf11859209d1ad27070477 259 Gene3D G3DSA:3.40.50.80 101 255 1.2E-41 T 17-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BJD13_07365 a0e3e43c80dfb5d9954901e4138ed365 425 Gene3D G3DSA:1.20.1250.20 225 424 9.6E-9 T 17-10-2018 BJD13_07365 a0e3e43c80dfb5d9954901e4138ed365 425 Pfam PF07690 Major Facilitator Superfamily 20 372 1.0E-9 T 17-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD13_07365 a0e3e43c80dfb5d9954901e4138ed365 425 SUPERFAMILY SSF103473 10 421 3.79E-22 T 17-10-2018 IPR036259 MFS transporter superfamily BJD13_06345 1282a5a69a5e518aa7c2fd659f255e9d 396 SMART SM00283 78 350 6.9E-13 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD13_06345 1282a5a69a5e518aa7c2fd659f255e9d 396 SUPERFAMILY SSF58104 63 342 1.83E-44 T 17-10-2018 BJD13_06345 1282a5a69a5e518aa7c2fd659f255e9d 396 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 163 307 6.2E-30 T 17-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BJD13_06345 1282a5a69a5e518aa7c2fd659f255e9d 396 Gene3D G3DSA:1.10.287.950 62 350 2.8E-44 T 17-10-2018 BJD13_19270 8c9bd2fccf472ea6143b810e16e52dcc 373 Pfam PF00487 Fatty acid desaturase 71 337 3.6E-32 T 17-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 BJD13_04680 c875ca7cdea94d70c0fef563b8c8f17b 86 Pfam PF03795 YCII-related domain 5 84 1.3E-7 T 17-10-2018 IPR005545 YCII-related BJD13_04680 c875ca7cdea94d70c0fef563b8c8f17b 86 SUPERFAMILY SSF54909 3 84 1.26E-12 T 17-10-2018 IPR011008 Dimeric alpha-beta barrel BJD13_17855 6246cfa049126c8a70db53e9d246d6e9 302 Pfam PF04366 Las17-binding protein actin regulator 100 211 6.6E-29 T 17-10-2018 IPR007461 Ysc84 actin-binding domain BJD13_12190 fbd61fd5ac74c78c68cc8c71cdc6c949 163 Pfam PF11304 Protein of unknown function (DUF3106) 56 153 6.4E-22 T 17-10-2018 IPR021455 Protein of unknown function DUF3106 BJD13_19535 aef4b31f541b08d56a5a6749248303a3 72 Pfam PF11137 Protein of unknown function (DUF2909) 8 65 2.0E-22 T 17-10-2018 IPR021313 Protein of unknown function DUF2909 BJD13_09990 75b54173a01d2acbc2e3230ab7ef8c22 125 Pfam PF16137 Domain of unknown function (DUF4845) 29 113 1.8E-27 T 17-10-2018 IPR032314 Protein of unknown function DUF4845 BJD13_15690 fae9eecabb6e37684ce83f74874cc28f 103 Pfam PF12365 Protein of unknown function (DUF3649) 71 98 1.5E-7 T 17-10-2018 IPR022109 Protein of unknown function DUF3649 BJD13_14275 61e00342f0cdf14a93fa60d5300f0d9c 324 Pfam PF01148 Cytidylyltransferase family 57 320 1.3E-63 T 17-10-2018 BJD13_05310 c83f906a8f803ff991e0d86884093681 56 Pfam PF07896 Protein of unknown function (DUF1674) 18 56 2.9E-17 T 17-10-2018 IPR012875 Protein of unknown function DUF1674 BJD13_22960 9789a945ddf5734456a0106d5a001d41 398 Gene3D G3DSA:1.20.1250.20 2 210 6.0E-22 T 17-10-2018 BJD13_22960 9789a945ddf5734456a0106d5a001d41 398 Gene3D G3DSA:1.20.1250.20 211 398 1.9E-13 T 17-10-2018 BJD13_22960 9789a945ddf5734456a0106d5a001d41 398 Pfam PF07690 Major Facilitator Superfamily 21 269 3.3E-16 T 17-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD13_22960 9789a945ddf5734456a0106d5a001d41 398 SUPERFAMILY SSF103473 3 389 3.53E-36 T 17-10-2018 IPR036259 MFS transporter superfamily BJD13_04865 9997d0cd16b5de2b62da55f7cc509c6b 278 Gene3D G3DSA:1.10.3720.10 4 269 3.7E-67 T 17-10-2018 IPR035906 MetI-like superfamily BJD13_04865 9997d0cd16b5de2b62da55f7cc509c6b 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 266 8.9E-22 T 17-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BJD13_04865 9997d0cd16b5de2b62da55f7cc509c6b 278 SUPERFAMILY SSF161098 8 278 7.38E-73 T 17-10-2018 IPR035906 MetI-like superfamily BJD13_17075 985938dbdde8b08b049658a3543642ad 396 Gene3D G3DSA:1.10.10.2840 255 383 1.1E-19 T 17-10-2018 BJD13_17075 985938dbdde8b08b049658a3543642ad 396 Pfam PF13556 PucR C-terminal helix-turn-helix domain 321 378 4.3E-21 T 17-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain BJD13_17075 985938dbdde8b08b049658a3543642ad 396 Pfam PF05651 Putative sugar diacid recognition 4 134 1.5E-43 T 17-10-2018 IPR008599 Putative sugar diacid recognition BJD13_11635 55fd42b5f2ef18ac85abdaa4828178ae 719 SUPERFAMILY SSF50494 28 680 3.43E-24 T 17-10-2018 IPR009003 Peptidase S1, PA clan BJD13_11635 55fd42b5f2ef18ac85abdaa4828178ae 719 Pfam PF10459 Peptidase S46 22 717 7.7E-260 T 17-10-2018 IPR019500 Peptidase S46 GO:0008239|GO:0070009 BJD13_11635 55fd42b5f2ef18ac85abdaa4828178ae 719 Gene3D G3DSA:2.40.10.10 636 695 5.0E-6 T 17-10-2018 BJD13_02220 50779fed12b13cc6878d122708c7d48c 141 Gene3D G3DSA:3.30.300.20 6 132 2.8E-23 T 17-10-2018 IPR015946 K homology domain-like, alpha/beta BJD13_02220 50779fed12b13cc6878d122708c7d48c 141 SUPERFAMILY SSF82784 9 127 2.36E-27 T 17-10-2018 IPR036102 OsmC/Ohr superfamily BJD13_02220 50779fed12b13cc6878d122708c7d48c 141 Pfam PF02566 OsmC-like protein 48 125 1.0E-11 T 17-10-2018 IPR003718 OsmC/Ohr family BJD13_22290 bbc0ff1fa9cffb35563696e955c09371 409 PRINTS PR00173 Glutamate-aspartate symporter signature 334 353 6.6E-34 T 17-10-2018 BJD13_22290 bbc0ff1fa9cffb35563696e955c09371 409 PRINTS PR00173 Glutamate-aspartate symporter signature 74 99 6.6E-34 T 17-10-2018 BJD13_22290 bbc0ff1fa9cffb35563696e955c09371 409 PRINTS PR00173 Glutamate-aspartate symporter signature 151 173 6.6E-34 T 17-10-2018 BJD13_22290 bbc0ff1fa9cffb35563696e955c09371 409 PRINTS PR00173 Glutamate-aspartate symporter signature 299 325 6.6E-34 T 17-10-2018 BJD13_22290 bbc0ff1fa9cffb35563696e955c09371 409 PRINTS PR00173 Glutamate-aspartate symporter signature 361 381 6.6E-34 T 17-10-2018 BJD13_22290 bbc0ff1fa9cffb35563696e955c09371 409 PRINTS PR00173 Glutamate-aspartate symporter signature 44 64 6.6E-34 T 17-10-2018 BJD13_22290 bbc0ff1fa9cffb35563696e955c09371 409 Pfam PF00375 Sodium:dicarboxylate symporter family 3 406 4.3E-109 T 17-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BJD13_22290 bbc0ff1fa9cffb35563696e955c09371 409 Gene3D G3DSA:1.10.3860.10 1 409 5.4E-118 T 17-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 BJD13_22290 bbc0ff1fa9cffb35563696e955c09371 409 SUPERFAMILY SSF118215 3 406 1.05E-98 T 17-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 BJD13_23935 2daef39db5cb027fec6c8bfd61a803a9 367 Pfam PF03432 Relaxase/Mobilisation nuclease domain 141 271 1.7E-7 T 17-10-2018 IPR005094 Endonuclease relaxase, MobA/VirD2 BJD13_17090 9cf639e8105a3206ab9601f78b36b356 977 Gene3D G3DSA:2.170.130.10 33 171 1.3E-34 T 17-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily BJD13_17090 9cf639e8105a3206ab9601f78b36b356 977 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 169 2.3E-22 T 17-10-2018 IPR012910 TonB-dependent receptor, plug domain BJD13_17090 9cf639e8105a3206ab9601f78b36b356 977 SUPERFAMILY SSF56935 38 977 1.68E-78 T 17-10-2018 BJD13_17090 9cf639e8105a3206ab9601f78b36b356 977 Pfam PF00593 TonB dependent receptor 393 969 1.6E-39 T 17-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel BJD13_02165 14ca24e296c1cd1c94b3d207cb3d0ce5 202 SUPERFAMILY SSF53448 6 195 1.8E-19 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD13_02165 14ca24e296c1cd1c94b3d207cb3d0ce5 202 Gene3D G3DSA:3.90.550.10 4 196 8.4E-35 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD13_02165 14ca24e296c1cd1c94b3d207cb3d0ce5 202 Pfam PF12804 MobA-like NTP transferase domain 7 167 2.8E-24 T 17-10-2018 IPR025877 MobA-like NTP transferase BJD13_20740 19d2851785bdf6bc42a7b7b19f6147f0 102 Gene3D G3DSA:2.30.30.720 1 102 9.1E-43 T 17-10-2018 BJD13_20740 19d2851785bdf6bc42a7b7b19f6147f0 102 Pfam PF11607 Protein of unknown function (DUF3247) 1 92 5.3E-40 T 17-10-2018 IPR021649 Protein of unknown function DUF3247 BJD13_08045 abf99623b521a76ec194986c9973d3d2 375 Pfam PF01384 Phosphate transporter family 19 361 5.1E-79 T 17-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 BJD13_22090 5ae43cb63ca591d2f48d246977917e4e 149 Gene3D G3DSA:2.60.120.1140 23 145 2.8E-39 T 17-10-2018 IPR038695 Saro_0823-like superfamily BJD13_22090 5ae43cb63ca591d2f48d246977917e4e 149 Pfam PF02643 Uncharacterized ACR, COG1430 34 140 2.2E-31 T 17-10-2018 IPR003795 Protein of unknown function DUF192 BJD13_16710 87bf55f96c3f85daa7323c5cd6307cf2 220 Pfam PF03006 Haemolysin-III related 21 207 1.5E-25 T 17-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 BJD13_17455 04cba229d6958a6df1a570fe196a3b8d 233 Pfam PF13835 Domain of unknown function (DUF4194) 56 214 1.4E-45 T 17-10-2018 IPR025449 Protein of unknown function DUF4194 BJD13_10300 419ee22ae78dc929b82177d1ab12e900 774 SUPERFAMILY SSF48452 69 535 5.69E-7 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_10300 419ee22ae78dc929b82177d1ab12e900 774 SUPERFAMILY SSF48452 469 537 1.84E-8 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_10300 419ee22ae78dc929b82177d1ab12e900 774 Gene3D G3DSA:1.25.40.10 32 306 1.1E-7 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_10335 ec91c890ee0ab9386d8648dcc524af4b 111 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 22 95 6.4E-15 T 17-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 BJD13_10335 ec91c890ee0ab9386d8648dcc524af4b 111 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 17 110 9.6E-38 T 17-10-2018 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 BJD13_02650 4b39c42be1348220c88cfabe31391178 267 Pfam PF14257 Domain of unknown function (DUF4349) 27 253 1.1E-27 T 17-10-2018 IPR025645 Domain of unknown function DUF4349 BJD13_05165 d48ad91d11dbae1238992d731d5c18a9 204 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 61 83 - T 17-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 BJD13_05165 d48ad91d11dbae1238992d731d5c18a9 204 Pfam PF01066 CDP-alcohol phosphatidyltransferase 13 83 5.1E-13 T 17-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 BJD13_05165 d48ad91d11dbae1238992d731d5c18a9 204 Gene3D G3DSA:1.20.120.1760 13 170 1.2E-14 T 17-10-2018 BJD13_03175 a35cb9769729946eb31a8afdcec763f1 219 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 20 167 5.7E-36 T 17-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BJD13_03175 a35cb9769729946eb31a8afdcec763f1 219 Gene3D G3DSA:1.20.120.1200 4 169 1.7E-41 T 17-10-2018 BJD13_00335 33d1182ffc22ee6ee448fbcc0abe815d 200 Pfam PF03692 Putative zinc- or iron-chelating domain 76 145 4.0E-9 T 17-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein BJD13_11690 a6f6dd5bc074820378f54e17c942ac02 130 Gene3D G3DSA:3.30.40.60 7 129 4.7E-7 T 17-10-2018 BJD13_09580 38f894240a7d9e1912767e0ecc2e0438 517 Pfam PF13372 Alginate export 120 508 4.7E-41 T 17-10-2018 IPR025388 Alginate export domain BJD13_09570 9e1fad9905f00c58ce022898df949547 305 Pfam PF13796 Putative sensor 118 297 1.1E-42 T 17-10-2018 IPR025828 Putative sensor domain BJD13_15810 9a549f85d6c44651192cd06183e8198e 338 Pfam PF01112 Asparaginase 27 332 5.0E-123 T 17-10-2018 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 BJD13_15810 9a549f85d6c44651192cd06183e8198e 338 SUPERFAMILY SSF56235 26 333 4.96E-98 T 17-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BJD13_15810 9a549f85d6c44651192cd06183e8198e 338 Gene3D G3DSA:3.60.20.30 202 338 1.2E-52 T 17-10-2018 BJD13_08985 f69454807e6796a1982a19e6f9dabffc 299 Gene3D G3DSA:1.10.10.10 2 89 1.9E-26 T 17-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BJD13_08985 f69454807e6796a1982a19e6f9dabffc 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 3.5E-23 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_08985 f69454807e6796a1982a19e6f9dabffc 299 SUPERFAMILY SSF46785 5 115 1.63E-25 T 17-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BJD13_08985 f69454807e6796a1982a19e6f9dabffc 299 SUPERFAMILY SSF53850 93 299 4.19E-39 T 17-10-2018 BJD13_08985 f69454807e6796a1982a19e6f9dabffc 299 Gene3D G3DSA:3.40.190.10 165 269 4.8E-51 T 17-10-2018 BJD13_08985 f69454807e6796a1982a19e6f9dabffc 299 Pfam PF03466 LysR substrate binding domain 93 298 5.4E-42 T 17-10-2018 IPR005119 LysR, substrate-binding BJD13_08985 f69454807e6796a1982a19e6f9dabffc 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.4E-10 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_08985 f69454807e6796a1982a19e6f9dabffc 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.4E-10 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_08985 f69454807e6796a1982a19e6f9dabffc 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.4E-10 T 17-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BJD13_08985 f69454807e6796a1982a19e6f9dabffc 299 Gene3D G3DSA:3.40.190.10 96 292 4.8E-51 T 17-10-2018 BJD13_07305 e8a61b842a205ea246cdbb495ccc0100 183 Pfam PF02517 CAAX protease self-immunity 82 172 2.9E-16 T 17-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 BJD13_12950 e2b23184ec45b2dd85b21786c02893eb 30 Pfam PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) 4 30 7.3E-11 T 17-10-2018 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 BJD13_20240 c0c5565dce7bdb527f356452e04c26e8 81 Pfam PF10122 Mu-like prophage protein Com 1 51 2.5E-33 T 17-10-2018 IPR019294 Translational regulator Com BJD13_05930 c2477dd50537c13f7fd55a71c858fa7f 336 Pfam PF06996 Type VI secretion, TssG 21 320 1.0E-98 T 17-10-2018 IPR010732 Type VI secretion, TssG-like BJD13_05930 c2477dd50537c13f7fd55a71c858fa7f 336 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 21 320 6.7E-106 T 17-10-2018 IPR010732 Type VI secretion, TssG-like BJD13_07095 493dd92288e150a7409de451537f7020 298 Gene3D G3DSA:3.20.20.70 1 297 7.4E-130 T 17-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BJD13_07095 493dd92288e150a7409de451537f7020 298 SUPERFAMILY SSF51569 2 285 1.47E-70 T 17-10-2018 BJD13_07095 493dd92288e150a7409de451537f7020 298 Pfam PF00682 HMGL-like 5 275 1.4E-52 T 17-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 BJD13_06440 c4644f35c049d4029d6eb122f5807914 230 PRINTS PR01008 Flagellar L-ring protein signature 70 82 1.1E-21 T 17-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 BJD13_06440 c4644f35c049d4029d6eb122f5807914 230 PRINTS PR01008 Flagellar L-ring protein signature 190 204 1.1E-21 T 17-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 BJD13_06440 c4644f35c049d4029d6eb122f5807914 230 PRINTS PR01008 Flagellar L-ring protein signature 143 158 1.1E-21 T 17-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 BJD13_06440 c4644f35c049d4029d6eb122f5807914 230 PRINTS PR01008 Flagellar L-ring protein signature 169 185 1.1E-21 T 17-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 BJD13_06440 c4644f35c049d4029d6eb122f5807914 230 PRINTS PR01008 Flagellar L-ring protein signature 206 220 1.1E-21 T 17-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 BJD13_06440 c4644f35c049d4029d6eb122f5807914 230 Pfam PF02107 Flagellar L-ring protein 48 227 3.0E-57 T 17-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 BJD13_06440 c4644f35c049d4029d6eb122f5807914 230 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 227 25.219 T 17-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 BJD13_08250 97cbaa0c6b733c0ee828e565baa49b01 235 Gene3D G3DSA:1.25.40.10 134 225 2.1E-10 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_08250 97cbaa0c6b733c0ee828e565baa49b01 235 SUPERFAMILY SSF48452 100 207 1.57E-7 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_02435 5de4985fcd58af6f93728edf60afceec 343 PRINTS PR00069 Aldo-keto reductase signature 48 72 1.5E-5 T 17-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BJD13_02435 5de4985fcd58af6f93728edf60afceec 343 PRINTS PR00069 Aldo-keto reductase signature 143 160 1.5E-5 T 17-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BJD13_02435 5de4985fcd58af6f93728edf60afceec 343 PRINTS PR00069 Aldo-keto reductase signature 112 130 1.5E-5 T 17-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BJD13_02435 5de4985fcd58af6f93728edf60afceec 343 Gene3D G3DSA:3.20.20.100 1 343 5.8E-139 T 17-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BJD13_02435 5de4985fcd58af6f93728edf60afceec 343 SUPERFAMILY SSF51430 1 318 1.44E-98 T 17-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BJD13_02435 5de4985fcd58af6f93728edf60afceec 343 Pfam PF00248 Aldo/keto reductase family 16 318 2.7E-68 T 17-10-2018 IPR023210 NADP-dependent oxidoreductase domain BJD13_15195 3f65f5a5440cfe9093f16e30b633b6d4 415 TIGRFAM TIGR00277 HDIG: HDIG domain 174 264 2.1E-10 T 17-10-2018 IPR006675 HDIG domain BJD13_15195 3f65f5a5440cfe9093f16e30b633b6d4 415 Pfam PF11871 Domain of unknown function (DUF3391) 3 143 4.4E-29 T 17-10-2018 IPR021812 Protein of unknown function DUF3391 BJD13_15195 3f65f5a5440cfe9093f16e30b633b6d4 415 Pfam PF13487 HD domain 225 287 3.5E-16 T 17-10-2018 BJD13_15195 3f65f5a5440cfe9093f16e30b633b6d4 415 SMART SM00471 170 306 1.6E-11 T 17-10-2018 IPR003607 HD/PDEase domain BJD13_15195 3f65f5a5440cfe9093f16e30b633b6d4 415 Gene3D G3DSA:1.10.3210.10 25 336 3.3E-65 T 17-10-2018 BJD13_15195 3f65f5a5440cfe9093f16e30b633b6d4 415 SUPERFAMILY SSF109604 168 334 1.3E-30 T 17-10-2018 BJD13_04380 016fbe75570cb6311fbb3bdd5829f6e4 166 SUPERFAMILY SSF52540 28 139 3.3E-16 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_04380 016fbe75570cb6311fbb3bdd5829f6e4 166 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 128 2.1E-31 T 17-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 BJD13_04380 016fbe75570cb6311fbb3bdd5829f6e4 166 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 138 1.1E-32 T 17-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 BJD13_04380 016fbe75570cb6311fbb3bdd5829f6e4 166 Gene3D G3DSA:3.40.50.300 2 152 3.3E-35 T 17-10-2018 BJD13_20670 a17aa94b3e548a509855ed23e70d6361 94 Pfam PF13223 Protein of unknown function (DUF4031) 3 79 3.1E-29 T 17-10-2018 IPR025109 Domain of unknown function DUF4031 BJD13_06735 5f6e47fe9f75913fecd3d41dd2c7fff0 138 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 69 121 1.3E-14 T 17-10-2018 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 BJD13_01025 16cae45681dd035695587fefcc4881a4 383 Gene3D G3DSA:3.40.50.300 2 208 2.8E-26 T 17-10-2018 BJD13_01025 16cae45681dd035695587fefcc4881a4 383 SUPERFAMILY SSF52540 26 239 6.83E-14 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_20010 de40a162490bb6da8b0666967739e1d8 395 SUPERFAMILY SSF56349 75 387 5.0E-30 T 17-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BJD13_20010 de40a162490bb6da8b0666967739e1d8 395 Gene3D G3DSA:1.10.443.10 214 386 2.9E-11 T 17-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 BJD13_20010 de40a162490bb6da8b0666967739e1d8 395 Gene3D G3DSA:1.10.150.130 72 197 5.0E-10 T 17-10-2018 IPR010998 Integrase/recombinase, N-terminal BJD13_20950 4bccf2a6ee919b36ca3e58e657f1578e 101 SUPERFAMILY SSF50156 30 90 6.41E-6 T 17-10-2018 IPR036034 PDZ superfamily GO:0005515 BJD13_20950 4bccf2a6ee919b36ca3e58e657f1578e 101 Gene3D G3DSA:2.30.42.10 28 94 8.9E-6 T 17-10-2018 BJD13_09485 576ccc2672548a7840bcc95f4e19738e 275 Pfam PF01148 Cytidylyltransferase family 3 269 1.0E-68 T 17-10-2018 BJD13_09485 576ccc2672548a7840bcc95f4e19738e 275 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 231 257 - T 17-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 BJD13_16965 4b94774aab17e06c44ddbf53761371d5 278 Pfam PF02517 CAAX protease self-immunity 167 266 3.0E-19 T 17-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 BJD13_16770 0de1f0a5853a9684eb9da7ad6ecf9e12 579 Pfam PF05569 BlaR1 peptidase M56 10 306 7.9E-85 T 17-10-2018 IPR008756 Peptidase M56 BJD13_21180 f369e027c10cd787b58072ccd4debf27 328 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 28 312 1.4E-38 T 17-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD BJD13_21180 f369e027c10cd787b58072ccd4debf27 328 TIGRFAM TIGR00374 TIGR00374: TIGR00374 family protein 54 323 2.7E-14 T 17-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD BJD13_15455 91b98017287f39382c561e607e5038a3 222 SUPERFAMILY SSF54593 1 118 5.78E-13 T 17-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD13_15455 91b98017287f39382c561e607e5038a3 222 Gene3D G3DSA:3.10.180.10 2 206 1.0E-47 T 17-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD13_21755 1b4ce31687417ade9406e3310ed448af 356 Gene3D G3DSA:3.20.20.100 9 344 9.7E-109 T 17-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BJD13_21755 1b4ce31687417ade9406e3310ed448af 356 Pfam PF00248 Aldo/keto reductase family 22 325 6.1E-70 T 17-10-2018 IPR023210 NADP-dependent oxidoreductase domain BJD13_21755 1b4ce31687417ade9406e3310ed448af 356 SUPERFAMILY SSF51430 10 325 1.83E-91 T 17-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BJD13_08655 14e03fbf203cb127b1898fea3ef6cd40 175 SUPERFAMILY SSF53474 4 171 4.24E-20 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_08655 14e03fbf203cb127b1898fea3ef6cd40 175 Gene3D G3DSA:3.40.50.1820 1 175 8.8E-43 T 17-10-2018 IPR029058 Alpha/Beta hydrolase fold BJD13_20120 4664e109c518306be849d7a717fb5500 100 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 9 87 3.2E-15 T 17-10-2018 IPR019289 Bacteriophage tail protein Gp41, putative BJD13_04190 9072a8c4c79c9fbb71fc59931de5451b 423 Pfam PF13387 Domain of unknown function (DUF4105) 58 190 2.0E-16 T 17-10-2018 IPR025178 Domain of unknown function DUF4105 BJD13_15565 579056158bef83f3df697ea95e9a0c91 157 Pfam PF07308 Protein of unknown function (DUF1456) 88 154 2.0E-24 T 17-10-2018 IPR009921 Domain of unknown function DUF1456 BJD13_15565 579056158bef83f3df697ea95e9a0c91 157 Pfam PF07308 Protein of unknown function (DUF1456) 3 72 8.7E-25 T 17-10-2018 IPR009921 Domain of unknown function DUF1456 BJD13_07440 7b9b79a711b1821c8a75132255181711 463 Pfam PF00589 Phage integrase family 241 406 4.6E-10 T 17-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 BJD13_07440 7b9b79a711b1821c8a75132255181711 463 Gene3D G3DSA:1.10.443.10 219 434 6.5E-23 T 17-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 BJD13_07440 7b9b79a711b1821c8a75132255181711 463 SUPERFAMILY SSF56349 83 408 5.59E-37 T 17-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BJD13_07440 7b9b79a711b1821c8a75132255181711 463 Gene3D G3DSA:1.10.150.130 79 210 5.1E-8 T 17-10-2018 IPR010998 Integrase/recombinase, N-terminal BJD13_18160 836eddc1d31914c2be74a20e800a8da3 83 Pfam PF04226 Transglycosylase associated protein 33 79 5.8E-12 T 17-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 BJD13_16935 88eb381ffa60fa1bb83362393ea04f82 137 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 135 2.4E-24 T 17-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 BJD13_20660 567c94acc67357410362e40d6eea61b1 88 Pfam PF11730 Protein of unknown function (DUF3297) 6 76 5.2E-36 T 17-10-2018 IPR021724 Protein of unknown function DUF3297 BJD13_05935 2e548ece72942c22e8204d60ea6399ea 625 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 5 624 5.1E-197 T 17-10-2018 IPR010272 Type VI secretion system, TssF-like BJD13_05935 2e548ece72942c22e8204d60ea6399ea 625 PIRSF PIRSF028304 1 625 1.0E-177 T 17-10-2018 IPR010272 Type VI secretion system, TssF-like BJD13_05935 2e548ece72942c22e8204d60ea6399ea 625 Pfam PF05947 Type VI secretion system, TssF 6 623 3.9E-215 T 17-10-2018 IPR010272 Type VI secretion system, TssF-like BJD13_14745 739db76412816b35b5521a6b3f899ffe 61 Pfam PF11154 Protein of unknown function (DUF2934) 5 41 6.6E-12 T 17-10-2018 IPR021327 Protein of unknown function DUF2934 BJD13_13795 165710382c4ca708fa817181fd0c8a61 206 SUPERFAMILY SSF54001 23 199 4.25E-32 T 17-10-2018 IPR038765 Papain-like cysteine peptidase superfamily BJD13_13795 165710382c4ca708fa817181fd0c8a61 206 Gene3D G3DSA:3.90.1720.10 20 204 1.3E-32 T 17-10-2018 BJD13_13795 165710382c4ca708fa817181fd0c8a61 206 Pfam PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family 23 201 2.5E-35 T 17-10-2018 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family BJD13_05530 c9283b0723b604827dc508e00025285b 272 Pfam PF02535 ZIP Zinc transporter 10 105 2.7E-9 T 17-10-2018 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 BJD13_05530 c9283b0723b604827dc508e00025285b 272 Pfam PF02535 ZIP Zinc transporter 121 261 1.5E-19 T 17-10-2018 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 BJD13_05530 c9283b0723b604827dc508e00025285b 272 Hamap MF_00548 Zinc transporter ZupT [zupT]. 9 268 34.452 T 17-10-2018 IPR023498 Zinc transporter ZupT BJD13_07965 b17311529ab8a67fe54352fc19e47abc 204 Pfam PF09335 SNARE associated Golgi protein 55 163 7.7E-8 T 17-10-2018 IPR032816 SNARE associated Golgi protein BJD13_16625 e5144f1f10b6729f82690d5c4c080369 391 SUPERFAMILY SSF109604 132 378 1.13E-37 T 17-10-2018 BJD13_16625 e5144f1f10b6729f82690d5c4c080369 391 Gene3D G3DSA:1.10.3210.10 118 377 1.8E-38 T 17-10-2018 BJD13_16625 e5144f1f10b6729f82690d5c4c080369 391 Pfam PF08668 HDOD domain 136 321 8.5E-31 T 17-10-2018 IPR013976 Metal-dependent hydrolase HDOD BJD13_07340 6d991144e2ac2cbefd4288eb85dade82 388 Pfam PF04245 37-kD nucleoid-associated bacterial protein 23 371 5.7E-57 T 17-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 BJD13_21680 eb436c63c35cf7c057165d0ca2a62983 226 Pfam PF01965 DJ-1/PfpI family 25 221 2.2E-15 T 17-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 BJD13_21680 eb436c63c35cf7c057165d0ca2a62983 226 SUPERFAMILY SSF52317 1 222 1.66E-76 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD13_21680 eb436c63c35cf7c057165d0ca2a62983 226 Gene3D G3DSA:3.40.50.880 1 223 1.1E-81 T 17-10-2018 IPR029062 Class I glutamine amidotransferase-like BJD13_17170 eda499e7f92a1dbe364ff1464327e09e 249 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 4 249 3.0E-76 T 17-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria BJD13_17170 eda499e7f92a1dbe364ff1464327e09e 249 Pfam PF02405 Permease MlaE 35 245 5.9E-68 T 17-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 BJD13_10195 5620f1de2e67d91d33d934a90720e3c1 263 Pfam PF01578 Cytochrome C assembly protein 40 258 8.4E-32 T 17-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 BJD13_16175 7befc8207fb79d25ad7ad419e72286a3 281 SUPERFAMILY SSF52540 14 257 2.31E-49 T 17-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BJD13_16175 7befc8207fb79d25ad7ad419e72286a3 281 Gene3D G3DSA:3.40.50.300 3 278 2.9E-56 T 17-10-2018 BJD13_16175 7befc8207fb79d25ad7ad419e72286a3 281 Pfam PF00005 ABC transporter 36 193 7.0E-21 T 17-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BJD13_16175 7befc8207fb79d25ad7ad419e72286a3 281 SMART SM00382 45 250 3.2E-12 T 17-10-2018 IPR003593 AAA+ ATPase domain BJD13_17715 42749d3c7222edd28392e51cc98d126e 148 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 36 135 9.8E-14 T 17-10-2018 IPR019223 Domain of unknown function DUF2147 BJD13_17715 42749d3c7222edd28392e51cc98d126e 148 Gene3D G3DSA:2.40.128.520 73 144 6.2E-8 T 17-10-2018 BJD13_12740 545754bfffb4e246bd3c9122575f72d5 134 SUPERFAMILY SSF54593 1 129 2.31E-15 T 17-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD13_12740 545754bfffb4e246bd3c9122575f72d5 134 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 125 1.1E-5 T 17-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BJD13_12740 545754bfffb4e246bd3c9122575f72d5 134 Gene3D G3DSA:3.10.180.10 1 130 5.1E-28 T 17-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BJD13_21635 3e32a8708f199a48035fcd99f422574a 186 Gene3D G3DSA:1.20.58.320 4 85 1.0E-26 T 17-10-2018 BJD13_21635 3e32a8708f199a48035fcd99f422574a 186 Gene3D G3DSA:1.25.40.10 86 186 1.1E-34 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_21635 3e32a8708f199a48035fcd99f422574a 186 SUPERFAMILY SSF48452 10 182 3.26E-59 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_21635 3e32a8708f199a48035fcd99f422574a 186 Pfam PF06041 Bacterial protein of unknown function (DUF924) 17 183 1.1E-55 T 17-10-2018 IPR010323 Protein of unknown function DUF924 BJD13_20485 431a7997ad28d6a447bb7f789db9d9a0 469 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 6 434 3.2E-150 T 17-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 BJD13_20485 431a7997ad28d6a447bb7f789db9d9a0 469 PIRSF PIRSF006446 1 456 6.3E-183 T 17-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 BJD13_22265 0ef44495de8b678d42afda5d01107a7c 153 Pfam PF14316 Domain of unknown function (DUF4381) 7 142 2.6E-33 T 17-10-2018 IPR025489 Protein of unknown function (DUF4381 BJD13_16930 0056eb11fa782c513786780ec79b68da 126 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 126 2.1E-25 T 17-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 BJD13_16930 0056eb11fa782c513786780ec79b68da 126 Gene3D G3DSA:3.30.420.270 62 126 6.1E-5 T 17-10-2018 BJD13_22400 e245abe7e6257dec699531c7cd1dc9a5 452 Pfam PF13163 Protein of unknown function (DUF3999) 24 442 5.7E-109 T 17-10-2018 IPR025060 Protein of unknown function DUF3999 BJD13_02530 5582ad0ca95e668f0c4767f151c1bfe3 80 Gene3D G3DSA:3.10.290.10 1 71 2.4E-22 T 17-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 BJD13_02530 5582ad0ca95e668f0c4767f151c1bfe3 80 Pfam PF13275 S4 domain 7 69 2.0E-23 T 17-10-2018 BJD13_02530 5582ad0ca95e668f0c4767f151c1bfe3 80 SUPERFAMILY SSF55174 2 69 2.06E-17 T 17-10-2018 BJD13_22970 e3c62e6dbc852464bfed33e9189fed45 408 SUPERFAMILY SSF56059 97 316 4.47E-29 T 17-10-2018 BJD13_22970 e3c62e6dbc852464bfed33e9189fed45 408 Pfam PF02655 ATP-grasp domain 116 282 1.1E-5 T 17-10-2018 IPR003806 ATP-grasp fold, DUF201-type GO:0005524|GO:0046872 BJD13_22970 e3c62e6dbc852464bfed33e9189fed45 408 Gene3D G3DSA:3.30.470.20 111 402 3.5E-37 T 17-10-2018 BJD13_12525 16e9f70e5de1c01ec0c7daece9f6fb5f 126 Gene3D G3DSA:1.10.3830.10 8 125 1.8E-35 T 17-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 BJD13_12525 16e9f70e5de1c01ec0c7daece9f6fb5f 126 Pfam PF01219 Prokaryotic diacylglycerol kinase 22 121 1.2E-32 T 17-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 BJD13_20125 c65f94dd7d1080478a1934d3f48b7a07 169 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 3 168 7.1E-61 T 17-10-2018 IPR006498 Tail tube protein BJD13_20125 c65f94dd7d1080478a1934d3f48b7a07 169 Pfam PF04985 Phage tail tube protein FII 4 168 6.7E-67 T 17-10-2018 IPR006498 Tail tube protein BJD13_20395 a422af233e775a7d2db151a236e57c38 885 Pfam PF05650 Domain of unknown function (DUF802) 383 427 7.0E-7 T 17-10-2018 IPR008520 Domain of unknown function DUF802 BJD13_20395 a422af233e775a7d2db151a236e57c38 885 Pfam PF05650 Domain of unknown function (DUF802) 321 364 3.2E-9 T 17-10-2018 IPR008520 Domain of unknown function DUF802 BJD13_20395 a422af233e775a7d2db151a236e57c38 885 Pfam PF05650 Domain of unknown function (DUF802) 562 614 3.7E-11 T 17-10-2018 IPR008520 Domain of unknown function DUF802 BJD13_20395 a422af233e775a7d2db151a236e57c38 885 Pfam PF05650 Domain of unknown function (DUF802) 445 489 3.5E-6 T 17-10-2018 IPR008520 Domain of unknown function DUF802 BJD13_20395 a422af233e775a7d2db151a236e57c38 885 Pfam PF05650 Domain of unknown function (DUF802) 507 559 1.2E-17 T 17-10-2018 IPR008520 Domain of unknown function DUF802 BJD13_17560 869c6268309f8e7e1216c77dc2b35469 178 SUPERFAMILY SSF55729 3 154 2.88E-35 T 17-10-2018 IPR016181 Acyl-CoA N-acyltransferase BJD13_17560 869c6268309f8e7e1216c77dc2b35469 178 Gene3D G3DSA:3.40.630.30 1 167 1.6E-39 T 17-10-2018 BJD13_17560 869c6268309f8e7e1216c77dc2b35469 178 Pfam PF13302 Acetyltransferase (GNAT) domain 9 149 1.8E-23 T 17-10-2018 IPR000182 GNAT domain BJD13_04485 1d5058d952b2b46b7f7dbb514a780e98 146 SUPERFAMILY SSF53933 54 138 4.54E-32 T 17-10-2018 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 BJD13_04485 1d5058d952b2b46b7f7dbb514a780e98 146 Pfam PF00545 ribonuclease 55 135 9.2E-27 T 17-10-2018 IPR000026 Guanine-specific ribonuclease N1/T1/U2 GO:0003723|GO:0004521 BJD13_04485 1d5058d952b2b46b7f7dbb514a780e98 146 Gene3D G3DSA:3.10.450.30 47 139 7.3E-34 T 17-10-2018 BJD13_19220 1f46648fd86f762663aec469a1bfd905 364 Pfam PF11379 Protein of unknown function (DUF3182) 19 358 5.0E-128 T 17-10-2018 IPR021519 Protein of unknown function DUF3182 BJD13_00385 877ef09d4edf0bc7e12ff05c8de672a4 213 Pfam PF07791 Protein of unknown function (DUF1629) 13 133 9.7E-46 T 17-10-2018 IPR012433 Protein of unknown function DUF1629 BJD13_16330 4f02b606cefe4a1ada45fdf192dc5033 129 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 62 112 2.1E-19 T 17-10-2018 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 BJD13_00165 f018580461f139d229dc8be37d9931a0 350 Pfam PF11740 Plasmid replication region DNA-binding N-term 8 119 1.1E-24 T 17-10-2018 IPR021104 KfrA, N-terminal DNA-binding domain BJD13_22120 5fbd1227bc542f9fa24731d510a6de6b 73 TIGRFAM TIGR02449 TIGR02449: TIGR02449 family protein 9 73 4.1E-31 T 17-10-2018 IPR012662 Conserved hypothetical protein CHP02449 BJD13_03440 249ffb08d7fc8de25301d3ab04e4a043 208 SUPERFAMILY SSF69318 71 132 9.16E-6 T 17-10-2018 BJD13_03985 35e6fa5c32b1ad9682ac3bb6ef2e36b2 1335 Pfam PF14412 A nuclease family of the HNH/ENDO VII superfamily with conserved AHH 4 83 2.1E-4 T 17-10-2018 IPR032871 AHH domain-containing protein BJD13_16360 a703597b7777bf06774a4996c27ccd7a 1288 Gene3D G3DSA:2.60.120.200 42 247 1.4E-13 T 17-10-2018 BJD13_16360 a703597b7777bf06774a4996c27ccd7a 1288 SUPERFAMILY SSF49899 54 249 2.24E-15 T 17-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily BJD13_16360 a703597b7777bf06774a4996c27ccd7a 1288 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 78 240 2.8E-9 T 17-10-2018 BJD13_23090 19d619fc32206f0c09e2468e6843b179 255 Pfam PF11218 Protein of unknown function (DUF3011) 37 252 3.4E-73 T 17-10-2018 IPR021381 Protein of unknown function DUF3011 BJD13_11115 df7d1231d976c6cc4fdff0b677b67147 169 Pfam PF02620 Uncharacterized ACR, COG1399 61 167 1.4E-10 T 17-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD BJD13_01495 efbc7cdaa2504a0feb3fc2b6ed267041 106 Pfam PF04956 TrbC/VIRB2 family 3 96 7.7E-21 T 17-10-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 BJD13_16675 cc41fdaebb8832485a48e8624229c69f 236 SUPERFAMILY SSF81901 121 225 4.97E-7 T 17-10-2018 BJD13_16675 cc41fdaebb8832485a48e8624229c69f 236 Gene3D G3DSA:1.25.40.10 114 233 7.5E-10 T 17-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BJD13_01910 86a8280783134660ac7b14bfe5359cc7 267 Pfam PF10670 Domain of unknown function (DUF4198) 18 242 9.7E-73 T 17-10-2018 IPR019613 Protein of unknown function DUF4198 BJD13_19550 5e59c706c6c5881e455aa630144ca8c5 387 Pfam PF02628 Cytochrome oxidase assembly protein 133 377 2.2E-45 T 17-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 BJD13_19550 5e59c706c6c5881e455aa630144ca8c5 387 Pfam PF02628 Cytochrome oxidase assembly protein 15 122 8.4E-20 T 17-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 BJD13_22855 aa016f0f1fd56065241b1b6bff7a7331 385 Pfam PF07007 Lysozyme inhibitor LprI 26 104 1.2E-6 T 17-10-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal BJD13_07355 bc840ddb4bf643c75dc2981639b89d03 604 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 116 297 1.4E-7 T 17-10-2018 IPR003846 Uncharacterised protein family UPF0061 BJD13_22965 22664d4668cd12c99cd61021965b88c0 600 Pfam PF04183 IucA / IucC family 160 375 1.3E-34 T 17-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 BJD13_22965 22664d4668cd12c99cd61021965b88c0 600 Pfam PF06276 Ferric iron reductase FhuF-like transporter 398 553 6.6E-19 T 17-10-2018 IPR022770 Ferric iron reductase FhuF domain BJD13_22965 22664d4668cd12c99cd61021965b88c0 600 Gene3D G3DSA:1.10.510.40 365 524 5.2E-13 T 17-10-2018 BJD13_20960 fb93706b15471a8e4aac08fccaa19e93 433 Pfam PF02687 FtsX-like permease family 337 421 2.9E-11 T 17-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 BJD13_20960 fb93706b15471a8e4aac08fccaa19e93 433 Pfam PF12704 MacB-like periplasmic core domain 20 217 1.3E-23 T 17-10-2018 IPR025857 MacB-like periplasmic core domain BJD13_12590 aedf44860482f8d9a38bcea2b5dde35f 200 SUPERFAMILY SSF144064 2 182 5.3E-28 T 17-10-2018 BJD13_15980 62ca087283a43f31050e579c1109825a 325 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 13 323 9.9E-20 T 17-10-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX BJD13_14930 eb9fa5e6cd409cdeadf1d43cd643e5bb 312 Gene3D G3DSA:2.60.200.20 1 84 1.1E-6 T 17-10-2018 BJD13_03280 16a8c8022226174c715000f2581412da 199 Pfam PF01914 MarC family integral membrane protein 3 191 9.6E-48 T 17-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 BJD13_00110 74d8775d25a4f4f284039a2682ad9504 215 Pfam PF14348 Domain of unknown function (DUF4400) 30 202 4.2E-23 T 17-10-2018 IPR022266 Integrating conjugative element protein, PFL4697-type BJD13_18115 3783be485c379bb40768d435f3fa711e 302 Pfam PF14415 Domain of unknown function (DUF4424) 23 296 1.5E-83 T 17-10-2018 IPR025538 Domain of unknown function DUF4424 BJD13_14290 54e95393d091df2a0589cdfe044af197 498 TIGRFAM TIGR04222 near_uncomplex: TIGR04222 domain 225 445 7.4E-47 T 17-10-2018 IPR026467 Ser/Gly rich, Cys interspersed, C-terminal domain BJD13_12650 c30283405525e9996ecd169188d9d9d8 537 Pfam PF00328 Histidine phosphatase superfamily (branch 2) 158 263 6.1E-9 T 17-10-2018 IPR000560 Histidine phosphatase superfamily, clade-2 BJD13_12650 c30283405525e9996ecd169188d9d9d8 537 Gene3D G3DSA:3.40.50.1240 285 398 1.9E-123 T 17-10-2018 IPR029033 Histidine phosphatase superfamily BJD13_12650 c30283405525e9996ecd169188d9d9d8 537 Gene3D G3DSA:3.40.50.1240 159 526 1.9E-123 T 17-10-2018 IPR029033 Histidine phosphatase superfamily BJD13_12650 c30283405525e9996ecd169188d9d9d8 537 ProSitePatterns PS00616 Histidine acid phosphatases phosphohistidine signature. 159 173 - T 17-10-2018 IPR033379 Histidine acid phosphatase active site BJD13_12650 c30283405525e9996ecd169188d9d9d8 537 SUPERFAMILY SSF53254 155 526 5.42E-55 T 17-10-2018 IPR029033 Histidine phosphatase superfamily BJD13_00710 44445630621d129d730dfdfb01f74191 476 Pfam PF06122 Conjugative relaxosome accessory transposon protein 37 404 2.2E-65 T 17-10-2018 IPR010927 Type IV conjugative transfer system protein TraH BJD13_23810 ee16343dac42136bdad8b741f590191c 257 Pfam PF04012 PspA/IM30 family 2 228 1.7E-37 T 17-10-2018 IPR007157 PspA/IM30 BJD13_21270 811a0b79b8061112232991d0feb37a3d 308 Pfam PF02470 MlaD protein 39 115 1.7E-14 T 17-10-2018 IPR003399 Mce/MlaD BJD13_14285 04b8d7f7a2b70dcf6f5bdd6d824a2cfe 212 Gene3D G3DSA:1.20.120.1760 2 209 1.0E-21 T 17-10-2018 BJD13_14285 04b8d7f7a2b70dcf6f5bdd6d824a2cfe 212 Pfam PF01066 CDP-alcohol phosphatidyltransferase 22 92 2.5E-6 T 17-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 BJD13_08135 51bc93501937555d8ba81c1357f70bba 283 Pfam PF02706 Chain length determinant protein 5 58 3.1E-9 T 17-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 BJD13_20195 b3bce212fa9fa6524138943124932368 91 Pfam PF05449 Putative 3TM holin, Phage_holin_3 9 89 4.3E-27 T 17-10-2018 IPR008473 Putative 3TM holin, Phage holin 3 BJD13_13500 84fd187e22111249b6c1431d9bd90953 555 Gene3D G3DSA:1.20.1250.20 32 220 1.4E-11 T 17-10-2018 BJD13_13500 84fd187e22111249b6c1431d9bd90953 555 SUPERFAMILY SSF103473 23 537 3.53E-17 T 17-10-2018 IPR036259 MFS transporter superfamily BJD13_13500 84fd187e22111249b6c1431d9bd90953 555 Pfam PF07690 Major Facilitator Superfamily 43 246 5.7E-11 T 17-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BJD13_21510 01e1dbe0e0055cf4773be5f1f2208eaa 279 SUPERFAMILY SSF53448 4 250 1.18E-44 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD13_21510 01e1dbe0e0055cf4773be5f1f2208eaa 279 Gene3D G3DSA:3.90.550.10 3 228 1.5E-36 T 17-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BJD13_21510 01e1dbe0e0055cf4773be5f1f2208eaa 279 Pfam PF00535 Glycosyl transferase family 2 8 179 4.1E-20 T 17-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BJD13_05100 298db723cb3b87d08e843a2562584214 76 TIGRFAM TIGR03510 XapX: XapX domain 5 50 3.8E-14 T 17-10-2018 IPR020017 XapX domain BJD13_12715 38e1907b94ab8646f216035db33c4f3e 185 Pfam PF11539 Protein of unknown function (DUF3228) 3 183 6.9E-61 T 17-10-2018 IPR021610 Protein of unknown function DUF3228 BJD13_17320 1713e0fafb3e06931e89bea607498b58 283 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 90 95 - T 17-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 BJD13_17320 1713e0fafb3e06931e89bea607498b58 283 SUPERFAMILY SSF50494 87 261 2.92E-13 T 17-10-2018 IPR009003 Peptidase S1, PA clan BJD13_18690 ac090ce839b3899b9b3576bca5bdca48 347 Pfam PF04332 Protein of unknown function (DUF475) 49 339 3.4E-129 T 17-10-2018 IPR007427 Protein of unknown function DUF475 BJD13_21475 2dea13500cecba786658f1c64bff7722 265 ProDom PD046566 PATHWAY N GENERAL SECRETION PRECURSOR SIGNAL MEMBRANE XPSN TRANSMEMBRANE INNER 1 165 4.0E-78 T 17-10-2018 BJD13_08905 3d5750072404cf71505b682fe35967ec 272 Gene3D G3DSA:2.160.20.120 158 269 2.3E-7 T 17-10-2018 BJD13_15970 d33030f99e93c4d1143567cef7f41655 271 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 2 112 1.1E-17 T 17-10-2018 IPR002654 Glycosyl transferase, family 25 BJD13_12880 89d45f399094fb437457b99b8294685e 83 Pfam PF07362 Post-segregation antitoxin CcdA 11 80 6.7E-20 T 17-10-2018 IPR009956 Post-segregation antitoxin CcdA BJD13_10500 16b68dbaada9a40fe2ce6ebd121450b6 128 Pfam PF04241 Protein of unknown function (DUF423) 33 111 2.5E-8 T 17-10-2018 IPR006696 Protein of unknown function DUF423 BJD13_14200 13a114fc801e00a8509ff97e6e4f2b57 110 Pfam PF03091 CutA1 divalent ion tolerance protein 9 104 1.4E-33 T 17-10-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 BJD13_14200 13a114fc801e00a8509ff97e6e4f2b57 110 SUPERFAMILY SSF54913 5 107 3.11E-36 T 17-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta BJD13_14200 13a114fc801e00a8509ff97e6e4f2b57 110 Gene3D G3DSA:3.30.70.120 3 110 2.5E-37 T 17-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BJD13_18235 b11ace3b21405614c255a2d7863700bc 340 Pfam PF04909 Amidohydrolase 3 329 5.2E-62 T 17-10-2018 IPR006680 Amidohydrolase-related GO:0016787 BJD13_18235 b11ace3b21405614c255a2d7863700bc 340 SUPERFAMILY SSF51556 1 334 3.63E-95 T 17-10-2018 IPR032466 Metal-dependent hydrolase BJD13_18235 b11ace3b21405614c255a2d7863700bc 340 Gene3D G3DSA:3.20.20.140 1 339 9.9E-93 T 17-10-2018 BJD13_07320 7cb00ee08d09905456fb14998d2ba0ba 469 Gene3D G3DSA:1.10.443.10 242 431 6.4E-28 T 17-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 BJD13_07320 7cb00ee08d09905456fb14998d2ba0ba 469 SUPERFAMILY SSF56349 113 422 5.3E-37 T 17-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BJD13_07320 7cb00ee08d09905456fb14998d2ba0ba 469 Pfam PF00589 Phage integrase family 245 417 3.6E-21 T 17-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 BJD13_14860 b38c04f9e4b4cca240f4a0819303199d 169 Pfam PF09486 Bacterial type III secretion protein (HrpB7) 6 159 1.7E-33 T 17-10-2018 IPR013392 Type III secretion protein HrpB7 BJD13_14860 b38c04f9e4b4cca240f4a0819303199d 169 TIGRFAM TIGR02559 HrpB7: type III secretion protein HrpB7 6 159 4.2E-42 T 17-10-2018 IPR013392 Type III secretion protein HrpB7 BJD13_09215 bc4e94f9aba081eb9e2ddceba2e34162 276 Pfam PF00899 ThiF family 20 165 1.1E-34 T 17-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 BJD13_09215 bc4e94f9aba081eb9e2ddceba2e34162 276 Gene3D G3DSA:3.40.50.720 1 268 7.4E-88 T 17-10-2018 BJD13_09215 bc4e94f9aba081eb9e2ddceba2e34162 276 SUPERFAMILY SSF69572 6 261 1.31E-56 T 17-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 BJD13_01650 3823118c045cd86692a65dd9f663607d 132 Gene3D G3DSA:1.20.120.1620 23 132 4.1E-7 T 17-10-2018 IPR038314 T6SS superfamily BJD13_12955 2c97af778ff6a25afcfa194f3a5b46e1 450 Pfam PF00646 F-box domain 47 76 7.7E-4 T 17-10-2018 IPR001810 F-box domain GO:0005515 BJD13_12955 2c97af778ff6a25afcfa194f3a5b46e1 450 SUPERFAMILY SSF81383 40 83 1.47E-5 T 17-10-2018 IPR036047 F-box-like domain superfamily GO:0005515 BJD13_23930 76bdba612defd9155dd61fb65b0b1b56 89 Pfam PF05713 Bacterial mobilisation protein (MobC) 33 70 3.7E-8 T 17-10-2018 IPR008687 Bacterial mobilisation BJD13_17535 522a187e00ae4d1453c03563ccb412b8 325 Pfam PF14315 Domain of unknown function (DUF4380) 1 290 1.5E-129 T 17-10-2018 IPR025488 Protein of unknown function DUF4380 BJD13_07535 a6a88dff6c7fc161176b2f58cec5c8bc 94 Pfam PF13828 Domain of unknown function (DUF4190) 11 74 2.1E-22 T 17-10-2018 IPR025241 Domain of unknown function DUF4190 BJD13_21375 1780d0273e83e012489a224cb0155f73 155 Pfam PF06271 RDD family 14 143 2.4E-20 T 17-10-2018 IPR010432 RDD BJD13_09450 825a5d6122d5d80b58393827824d30cb 241 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 31 122 3.3E-9 T 17-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 BJD13_09450 825a5d6122d5d80b58393827824d30cb 241 SUPERFAMILY SSF49354 26 143 8.9E-16 T 17-10-2018 IPR008962 PapD-like superfamily BJD13_23850 13d6838958661daf218b07a765196513 221 Pfam PF09517 Eco29kI restriction endonuclease 5 169 1.5E-29 T 17-10-2018 IPR018575 Restriction endonuclease, type II, Eco29kI BJD13_04935 ba2cc74a23c99e3af2eb186f659c37ed 322 Pfam PF00953 Glycosyl transferase family 4 76 210 9.4E-24 T 17-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 BJD13_01995 de5f2c7afbd8fb700b2e522f8fe6591c 113 Pfam PF12977 Domain of Unknown Function with PDB structure (DUF3861) 15 105 5.9E-23 T 17-10-2018 IPR024476 Protein of unknown function DUF3861 BJD13_23805 4787fd2e5cbc79946bbc713ade9cdc7a 138 Pfam PF09938 Uncharacterized protein conserved in bacteria (DUF2170) 4 136 2.5E-41 T 17-10-2018 IPR019231 Protein of unknown function DUF2170 BJD13_06555 b5aed1f504580c997f4048a5ea7c9cd8 456 Pfam PF04230 Polysaccharide pyruvyl transferase 38 311 2.6E-15 T 17-10-2018 IPR007345 Polysaccharide pyruvyl transferase BJD13_05635 69dcbaf8026b709f8ef6e6c66e7659da 258 Pfam PF01925 Sulfite exporter TauE/SafE 14 253 2.3E-50 T 17-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 BJD13_06600 eab53e94bcdefdb7d10965debbc72f0f 175 Pfam PF03748 Flagellar basal body-associated protein FliL 73 175 1.5E-23 T 17-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 BJD13_03570 a82324ed4331848ddb106f5dcdcc2038 364 Pfam PF01757 Acyltransferase family 30 345 2.3E-21 T 17-10-2018 IPR002656 Acyltransferase 3 GO:0016747 BJD13_18950 13f6e4b69e2b5cff37cc088aaefe140b 394 Pfam PF07394 Protein of unknown function (DUF1501) 31 381 2.6E-46 T 17-10-2018 IPR010869 Protein of unknown function DUF1501 BJD13_21150 23830564d9a77ddfdc5801c8b8e117da 133 Pfam PF04138 GtrA-like protein 9 128 5.0E-21 T 17-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 BJD13_21540 a3098cca0b8e1072e203669263d6df98 151 Gene3D G3DSA:3.30.70.2590 55 149 1.8E-11 T 17-10-2018 IPR038470 Cellulose synthase subunit D superfamily BJD13_24015 2a36754209209c7c8466b3089de1e7bd 113 Pfam PF05101 Type IV secretory pathway, VirB3-like protein 17 100 3.2E-25 T 17-10-2018 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB BJD13_12175 2897aa31678820efa69c077464af0de0 101 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 8 90 9.4E-29 T 17-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 BJD13_13770 edad28d5b56a75adb774923b6454cb6d 363 ProDom PD041438 LIPOPROTEIN YAIW PRECURSOR SIGNAL MEMBRANE OUTER LIPOPROTEIN ECS0428 XAC0592 SECRETED 22 363 0.0 T 17-10-2018 IPR011673 Protein of unknown function DUF1615 BJD13_13770 edad28d5b56a75adb774923b6454cb6d 363 Pfam PF07759 Protein of unknown function (DUF1615) 48 362 1.8E-139 T 17-10-2018 IPR011673 Protein of unknown function DUF1615 BJD13_18220 cab21daf875cebfe61ee5d178348142c 199 SUPERFAMILY SSF161111 4 187 2.75E-26 T 17-10-2018 IPR027469 Cation efflux transmembrane domain superfamily BJD13_23740 5b6b07b11c710d1e077d6e0f9caea363 187 Pfam PF01292 Prokaryotic cytochrome b561 8 179 1.0E-31 T 17-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 BJD13_23740 5b6b07b11c710d1e077d6e0f9caea363 187 SUPERFAMILY SSF81342 3 179 5.1E-37 T 17-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 BJD13_17960 56091112b8763a40848fabfd78a6e9e0 88 Pfam PF01527 Transposase 45 72 8.9E-8 T 17-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 BJD13_03615 9fbba9627231339ad5f23c9a1c8955c0 338 Pfam PF01963 TraB family 53 336 2.8E-26 T 17-10-2018 IPR002816 Pheromone shutdown, TraB BJD13_10560 b1146bbcc022a225635b47948e185dd1 576 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 70 220 5.7E-17 T 17-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like BJD13_00680 ad4c5c6cd335b1becd852899908b31b7 263 Pfam PF06586 TraK protein 7 239 1.3E-13 T 17-10-2018 IPR010563 Pilus assembly TraK BJD13_18840 46870f77cee9f21ea9b3fddd763897ad 596 Pfam PF05960 Bacterial protein of unknown function (DUF885) 55 584 1.0E-86 T 17-10-2018 IPR010281 Protein of unknown function DUF885 BJD13_04275 73a6306232fce818e393e645e55aafe6 126 Pfam PF11743 Protein of unknown function (DUF3301) 17 109 1.6E-28 T 17-10-2018 IPR021732 Protein of unknown function DUF3301 BJD13_01920 d3de4834571bccb5402532adc2b767c8 213 Pfam PF16357 Putative PepSY_TM-like 18 213 2.1E-84 T 17-10-2018 IPR032307 Putative PepSY TM-like protein BJD13_05730 5834b16805cbd255c6351139f9ff99c6 218 Pfam PF05857 TraX protein 6 208 2.0E-41 T 17-10-2018 IPR008875 TraX BJD13_16420 b593de4749536c5c1092888848f90234 140 Pfam PF09912 Uncharacterized protein conserved in bacteria (DUF2141) 27 134 1.7E-31 T 17-10-2018 IPR018673 Protein of unknown function DUF2141 BJD13_03980 146b228123bd01e3a8c5a02d1f0e270f 212 Pfam PF07791 Protein of unknown function (DUF1629) 11 132 4.1E-47 T 17-10-2018 IPR012433 Protein of unknown function DUF1629 BJD13_15060 b5e5d0c9c7f3ef8f85cdd810e6819298 226 Pfam PF10677 Protein of unknown function (DUF2490) 29 214 2.0E-45 T 17-10-2018 IPR019619 Protein of unknown function DUF2490 BJD13_21470 8ad351c9da8f267b7c0e27e5152f0546 217 Pfam PF10741 Type II secretion system (T2SS), protein M subtype b 76 190 3.5E-31 T 17-10-2018 IPR034756 Type II secretion system (T2SS), protein M subtype b BJD13_12875 e1f5f870adba1b64f77d6c2ec1f5222e 255 Pfam PF05742 Transport and Golgi organisation 2 1 237 9.8E-53 T 17-10-2018 IPR008551 Transport and Golgi organisation protein 2 BJD13_02800 b1646a1cc41fc298795f9c80fda910d9 153 Pfam PF09685 Domain of unknown function (DUF4870) 47 152 5.3E-31 T 17-10-2018 IPR019109 Protein of unknown function DUF4870 BJD13_18350 2654fea7e14fac9da99de86667fc4686 129 Pfam PF13511 Domain of unknown function (DUF4124) 9 61 1.7E-7 T 17-10-2018 IPR025392 Domain of unknown function DUF4124 BJD13_14590 4869662f2277e2e7d15691923f64050e 139 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 12 95 9.7E-23 T 17-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 BJD13_14590 4869662f2277e2e7d15691923f64050e 139 Pfam PF03334 Na+/H+ antiporter subunit 12 92 1.2E-24 T 17-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 BJD13_21005 12906f61cf35e44089880c25b1e07db9 364 Pfam PF05275 Copper resistance protein B precursor (CopB) 160 364 4.4E-83 T 17-10-2018 IPR007939 Copper resistance B precursor GO:0005507|GO:0006878|GO:0009279 BJD13_01205 a34df46c1dd237dcc004ba7c6d01cda7 306 Pfam PF11740 Plasmid replication region DNA-binding N-term 13 126 1.8E-17 T 17-10-2018 IPR021104 KfrA, N-terminal DNA-binding domain BJD13_10685 dab76d1f3db1fb125f09559a60f0de7d 278 Pfam PF13557 Putative MetA-pathway of phenol degradation 42 278 8.2E-25 T 17-10-2018 IPR025737 MetA-pathway of phenol degradation, putative BJD13_03395 c0460d3037da9c720e9ac8c51b47bad6 136 Pfam PF04956 TrbC/VIRB2 family 14 110 7.6E-16 T 17-10-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 BJD13_02865 1ec238b4ea40d4d03600b2c1c044470e 414 Pfam PF04235 Protein of unknown function (DUF418) 245 401 1.0E-40 T 17-10-2018 IPR007349 Domain of unknown function DUF418 BJD13_05740 0f45c9459a2d9a05fbca04ab6f601936 105 Pfam PF10734 Protein of unknown function (DUF2523) 32 91 1.7E-9 T 17-10-2018 IPR019670 Protein of unkown function DUF2523 BJD13_01830 3c9c112da367ef31b689446ebae39d0c 275 Pfam PF11306 Protein of unknown function (DUF3108) 44 272 2.4E-30 T 17-10-2018 IPR021457 Protein of unknown function DUF3108 BJD13_20115 9eefa84fd1b33ece17ff11600370a874 37 Pfam PF06528 Phage P2 GpE 1 37 1.6E-22 T 17-10-2018 IPR009493 Burkholderia phage phiE202, Gp27 BJD13_11130 4437978aa575bb313f38aa269cc8e2d7 623 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 51 211 2.7E-15 T 17-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like BJD13_23680 23c19d294ced9ea270ad7f58f6dcd2d9 661 Pfam PF05170 AsmA family 33 560 1.8E-49 T 17-10-2018 IPR007844 AsmA BJD13_06385 c05508a098a46a08731dce0c528c04da 110 SUPERFAMILY SSF140566 5 81 5.75E-8 T 17-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 BJD13_08940 611766e555a2a8bc4dc6c51cc38b340a 166 Pfam PF11259 Protein of unknown function (DUF3060) 107 162 9.0E-13 T 17-10-2018 IPR021417 Protein of unknown function DUF3060 BJD13_01825 2be38007dad798ea7e5afa984e327853 227 Pfam PF11306 Protein of unknown function (DUF3108) 15 216 7.3E-20 T 17-10-2018 IPR021457 Protein of unknown function DUF3108 BJD13_18595 e857b848d6a0185f9cafe11c11efade3 143 SUPERFAMILY SSF54637 3 139 7.13E-15 T 17-10-2018 IPR029069 HotDog domain superfamily BJD13_18595 e857b848d6a0185f9cafe11c11efade3 143 Gene3D G3DSA:3.10.129.10 2 142 1.6E-7 T 17-10-2018 BJD13_20875 4266e8a86fef5368e4977fb7131894d0 270 SUPERFAMILY SSF103515 130 256 2.88E-5 T 17-10-2018 IPR036709 Autotransporter beta-domain superfamily BJD13_09235 43708f79e43fbf564c34fb96374043b8 161 Pfam PF04306 Protein of unknown function (DUF456) 23 158 1.9E-41 T 17-10-2018 IPR007403 Protein of unknown function DUF456 BJD13_00115 f3a79312769c72b83a92b1f9e5c5fcf0 277 SUPERFAMILY SSF56349 8 251 6.56E-12 T 17-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BJD13_17465 1ef6094386be847c14b739238f51dd89 279 Pfam PF01925 Sulfite exporter TauE/SafE 25 263 1.0E-37 T 17-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 BJD13_24135 e0a1d7f8edca91781b55f30a676d9a04 351 Pfam PF11740 Plasmid replication region DNA-binding N-term 8 119 2.4E-24 T 17-10-2018 IPR021104 KfrA, N-terminal DNA-binding domain BJD13_00485 e0a1d7f8edca91781b55f30a676d9a04 351 Pfam PF11740 Plasmid replication region DNA-binding N-term 8 119 2.4E-24 T 17-10-2018 IPR021104 KfrA, N-terminal DNA-binding domain BJD13_02640 fc4aef2d19d2e4d7f1f6b28f8e311dbd 601 Pfam PF05960 Bacterial protein of unknown function (DUF885) 59 594 2.0E-109 T 17-10-2018 IPR010281 Protein of unknown function DUF885 BJD13_02365 0e70c584d08dbd7509c93a84b43b95fb 363 Pfam PF12275 Protein of unknown function (DUF3616) 24 358 3.2E-113 T 17-10-2018 IPR022060 Protein of unknown function DUF3616 BJD13_07455 0f3a1286659f26ba9146e8844ee233bb 208 Pfam PF14487 Domain of unknown function (DUF4433) 18 188 1.6E-25 T 17-10-2018 IPR029494 Domain of unknown function DUF4433 BJD13_04400 58ca7c954d09f318a592dff557d7ce94 324 Pfam PF01963 TraB family 50 313 2.8E-79 T 17-10-2018 IPR002816 Pheromone shutdown, TraB BJD13_09695 34654aa217430aeebe998b4b16867246 294 Pfam PF07103 Protein of unknown function (DUF1365) 33 287 4.7E-73 T 17-10-2018 IPR010775 Protein of unknown function DUF1365 BJD13_02660 2b9555f0536fc235d519964d8a78a6ed 87 Pfam PF11066 Protein of unknown function (DUF2867) 8 60 1.4E-10 T 17-10-2018 IPR021295 Protein of unknown function DUF2867 BJD13_07820 abc9664cf74112d66acab720d2240f3f 223 Pfam PF06912 Protein of unknown function (DUF1275) 13 207 2.6E-34 T 17-10-2018 IPR010699 Protein of unknown function DUF1275 BJD13_17565 28b8f4b8c8bd1baff00299bf6a7d47a6 344 Pfam PF14094 Domain of unknown function (DUF4272) 133 340 4.6E-61 T 17-10-2018 IPR025368 Protein of unknown function DUF4272 BJD13_19850 958d3632701018196f23ab33a9947aee 413 Pfam PF12412 Protein of unknown function (DUF3667) 79 122 1.6E-15 T 17-10-2018 IPR022134 Protein of unknown function DUF3667 BJD13_09590 8e05b4432768bedc7cb601003486a9df 224 Pfam PF04367 Protein of unknown function (DUF502) 80 180 4.3E-27 T 17-10-2018 IPR007462 Protein of unknown function DUF502 BJD13_09875 3d3bbae30d9ea8c96236425ffff46be2 185 Pfam PF04519 Polymer-forming cytoskeletal 63 158 2.4E-22 T 17-10-2018 IPR007607 Bactofilin A/B BJD13_12555 315fe837e1e44613e77579f650cf83b7 827 Pfam PF02687 FtsX-like permease family 733 820 3.8E-8 T 17-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 BJD13_12555 315fe837e1e44613e77579f650cf83b7 827 Pfam PF02687 FtsX-like permease family 285 376 6.5E-10 T 17-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 BJD13_03420 f8218577719760c17472c85ebb3a79fd 163 Pfam PF13827 Domain of unknown function (DUF4189) 58 155 6.2E-19 T 17-10-2018 IPR025240 Domain of unknown function DUF4189 BJD13_04775 3fd9f636e544dd4e02190ed2eb864aa0 56 Pfam PF04995 Heme exporter protein D (CcmD) 2 44 7.2E-10 T 17-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004