locus_tag old_locus_tag gene Name start end strand product note type ID NCBI Samson_001 Samson_001 Samson_001 39 391 + hypothetical protein gene gene-Samson_001 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_001 Samson_002 Samson_002 Samson_002 378 681 + holin class II BLASTp similarity to phage N4 gp62 holin%2C NCBI entry YP_950540 gene gene-Samson_002 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_002 Samson_003 Samson_003 Samson_003 628 1198 + SAR endolysin glycosyl hydrolase BLASTp similarity to phage T1 SAR endolysin%2C NCBI entry YP_003933 gene gene-Samson_003 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_003 Samson_004 Samson_004 Samson_004 1187 1512 + i-spanin TMHMM predicts a single transmembrane domain gene gene-Samson_004 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_004 Samson_005 Samson_005 Samson_005 1415 1708 + o-spanin Predicted lipobox motif gene gene-Samson_005 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_005 Samson_006 Samson_006 Samson_006 1753 2252 + terminase small subunit HHPred predicted structural similarity at 99 probability to Bacillus phage SF6 terminase small subunit Protein Data Bank entry 3ZQP_I over most of protein gene gene-Samson_006 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_006 Samson_007 Samson_007 Samson_007 2219 3846 + terminase large subunit HHPred predicted structural similarity at 99 probability to phage T4 DNA packaging protein gp17 Protein Data Bank entry 3CPE_A over most of protein gene gene-Samson_007 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_007 Samson_008 Samson_008 Samson_008 3847 5374 + portal protein HHPred predicted structural similarity at 99 probability to phage P22 portal protein Protein Data Bank entry 4V4K_M over most of protein gene gene-Samson_008 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_008 Samson_009 Samson_009 Samson_009 5363 6471 + hypothetical protein gene gene-Samson_009 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_009 Samson_010 Samson_010 Samson_010 6495 7219 + hypothetical protein gene gene-Samson_010 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_010 Samson_011 Samson_011 Samson_011 7219 8206 + major capsid protein HHPred predicted structural similarity at 100 probability to phage SPP1 coat protein Protein Data Bank entry 4AN5_A over most of protein gene gene-Samson_011 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_011 Samson_012 Samson_012 Samson_012 8263 8703 + hypothetical protein gene gene-Samson_012 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_012 Samson_013 Samson_013 Samson_013 8773 9145 + hypothetical protein gene gene-Samson_013 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_013 Samson_014 Samson_014 Samson_014 9145 9676 + head-to-tail connector complex protein HHPred predicted structural similarity at 100 probability to Bacillus subtilis yqbG Protein Data Bank entry 1XN8_A over most of protein%2C shown in PMID 29279385 to be the head-to-tail connector complex protein of phage gene gene-Samson_014 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_014 Samson_015 Samson_015 Samson_015 9669 10060 + head completion protein head completion protein gp16 gene gene-Samson_015 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_015 Samson_016 Samson_016 Samson_016 10042 10512 + head-to-tail joining protein head-to-tail joining protein gp17 gene gene-Samson_016 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_016 Samson_017 Samson_017 Samson_017 10513 12067 + major tail protein BLASTp similarity to phage ST9NA 047 tail protein%2C NCBI entry YP_009101217 gene gene-Samson_017 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_017 Samson_018 Samson_018 Samson_018 12118 12558 + tail assembly chaperone gene gene-Samson_018 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_018 Samson_019 Samson_019 Samson_019 12118 12923 + tail assembly chaperone tail assembly chaperone frameshift product gene gene-Samson_019 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_019 Samson_020 Samson_020 Samson_020 12877 13326 + hypothetical protein gene gene-Samson_020 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_020 Samson_021 Samson_021 Samson_021 13319 17160 + tape measure protein BLASTp similarity to phage HK97 tail length tape measure protein NCBI entry NP_037710.1 gene gene-Samson_021 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_021 Samson_022 Samson_022 Samson_022 17150 18119 + tail assembly protein BLASTp similarity to Xylella phage Salvo tail assembly protein%2C UniProtKB entry V5Q7X4 gene gene-Samson_022 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_022 Samson_023 Samson_023 Samson_023 18107 19027 + hypothetical protein gene gene-Samson_023 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_023 Samson_024 Samson_024 Samson_024 19019 20737 + minor tail protein HHPred predicted structural similarity at 96 probability to phage T5 distal tail protein Protein Data Bank entry 6F2M_D in two regions gene gene-Samson_024 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_024 Samson_025 Samson_025 Samson_025 20728 21568 + hypothetical protein gene gene-Samson_025 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_025 Samson_026 Samson_026 Samson_026 21557 23996 + tail fiber protein BLASTp similarity to phage Chi protein 30%2C NCBI entry YP_009101125.1%3B Contains putative phage tail protein InterProScan domain PR032876 gene gene-Samson_026 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_026 Samson_027 Samson_027 Samson_027 23993 26076 - DNA polymerase I HHPred predicted structural similarity at 100 probability to phage RB69 DNA polymerase complex Protein Data Bank entry 3QEX_A in over more than half of the protein%3B Contains InterProScan domain IPR006134 for DNA pol B family gene gene-Samson_027 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_027 Samson_028 Samson_028 Samson_028 26077 27249 - DNA polymerase III sliding clamp HHPred predicted structural similarity at 92 probability to phage RB69 DNA polymerase sliding clamp Protein Data Bank entry 1B77_C in about half of the protein gene gene-Samson_028 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_028 Samson_029 Samson_029 Samson_029 27245 28811 - DNA helicase BLASTp similarity to phage T1 STP-dependent helicase%2C NCBI entry YP_003923%3B Contains InterProScan domain IPR027417%2C ATPase family gene gene-Samson_029 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_029 Samson_030 Samson_030 Samson_030 28893 30008 - RecB-like exonuclease HHPred predicted structural similarity at 99 probability to phage lambda exonuclease Protein Data Bank entry 3SM4_A in about half of the protein gene gene-Samson_030 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_030 Samson_031 Samson_031 Samson_031 29902 30444 - hypothetical protein gene gene-Samson_031 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_031 Samson_032 Samson_032 Samson_032 30507 31282 - ssDNA binding protein gene gene-Samson_032 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_032 Samson_033 Samson_033 Samson_033 31330 31404 - tRNA-Gln tRNA gene-Samson_033 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_033 Samson_034 Samson_034 Samson_034 31410 32138 - recombinase HHPred predicted structural similarity at 98 probability to phage T4 recombinase UvsX Protein Data Bank entry 3IO5_B in about half of the protein%3B recombinase UvsX gene gene-Samson_034 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_034 Samson_035 Samson_035 Samson_035 32279 32798 - hypothetical protein gene gene-Samson_035 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_035 Samson_036 Samson_036 Samson_036 32864 33438 - MazG-like nucleotide pyrophosphohydrolase Contains CATH superfamily G3DSA:1.10.287.1080 domain gene gene-Samson_036 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_036 Samson_037 Samson_037 Samson_037 33416 33798 + hypothetical protein gene gene-Samson_037 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_037 Samson_038 Samson_038 Samson_038 33788 36116 + DNA primase BLASTp similarity to ST9NA protein 74%2C NCBI entry YP_009101244.1 gene gene-Samson_038 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_038 Samson_039 Samson_039 Samson_039 36276 36489 + hypothetical protein gene gene-Samson_039 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_039 Samson_040 Samson_040 Samson_040 36508 36683 + hypothetical protein gene gene-Samson_040 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_040 Samson_041 Samson_041 Samson_041 36741 37252 + hypothetical protein gene gene-Samson_041 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_041 Samson_042 Samson_042 Samson_042 37256 37532 + hypothetical protein gene gene-Samson_042 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_042 Samson_043 Samson_043 Samson_043 37849 38183 + hypothetical protein gene gene-Samson_043 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_043 Samson_044 Samson_044 Samson_044 38190 38410 + hypothetical protein gene gene-Samson_044 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_044 Samson_045 Samson_045 Samson_045 38315 38567 + hypothetical protein gene gene-Samson_045 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_045 Samson_046 Samson_046 Samson_046 38627 39014 + hypothetical protein gene gene-Samson_046 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_046 Samson_047 Samson_047 Samson_047 39058 39293 + hypothetical protein gene gene-Samson_047 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_047 Samson_048 Samson_048 Samson_048 39280 39826 + tRNA endonuclease-like domain superfamily protein Contains InterProScan domain IPR011856 gene gene-Samson_048 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_048 Samson_049 Samson_049 Samson_049 39814 40092 + hypothetical protein gene gene-Samson_049 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_049 Samson_050 Samson_050 Samson_050 40080 40298 + hypothetical protein gene gene-Samson_050 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_050 Samson_051 Samson_051 Samson_051 40275 40461 + hypothetical protein gene gene-Samson_051 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_051 Samson_052 Samson_052 Samson_052 40508 40823 + hypothetical protein gene gene-Samson_052 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_052 Samson_053 Samson_053 Samson_053 40824 41136 + hypothetical protein gene gene-Samson_053 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_053 Samson_054 Samson_054 Samson_054 41186 41432 + hypothetical protein gene gene-Samson_054 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_054 Samson_055 Samson_055 Samson_055 41402 41905 + deoxycytidylate deaminase Contains InterProScan domain IPR002125 for Cytidine and deoxycytidylate deaminases zinc-binding region signature gene gene-Samson_055 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_055 Samson_056 Samson_056 Samson_056 41899 42285 + hypothetical protein gene gene-Samson_056 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_056 Samson_057 Samson_057 Samson_057 42319 42539 + hypothetical protein gene gene-Samson_057 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_057 Samson_058 Samson_058 Samson_058 42611 43199 + hypothetical protein gene gene-Samson_058 http://www.ncbi.nlm.nih.gov/gene/?term=Samson_058