locus-tag class description OM952_00005 PF00308 Bacterial dnaA protein OM952_00005 PF08299 Bacterial dnaA protein helix-turn-helix OM952_00005 PF11638 DnaA N-terminal domain OM952_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain OM952_00010 PF02767 DNA polymerase III beta subunit, central domain OM952_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain OM952_00015 PF02463 RecF/RecN/SMC N terminal domain OM952_00020 PF00204 DNA gyrase B OM952_00020 PF00986 DNA gyrase B subunit, carboxyl terminus OM952_00020 PF18053 DNA gyrase B subunit insert domain OM952_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM952_00020 PF01751 Toprim domain OM952_00030 PF01435 Peptidase family M48 OM952_00040 PF03544 Gram-negative bacterial TonB protein C-terminal OM952_00045 PF01618 MotA/TolQ/ExbB proton channel family OM952_00050 PF02472 Biopolymer transport protein ExbD/TolR OM952_00055 PF02472 Biopolymer transport protein ExbD/TolR OM952_00075 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ OM952_00085 PF13091 PLD-like domain OM952_00085 PF13396 Phospholipase_D-nuclease N-terminal OM952_00100 PF04055 Radical SAM superfamily OM952_00110 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) OM952_00125 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain OM952_00125 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain OM952_00130 PF13180 PDZ domain OM952_00130 PF03572 Peptidase family S41 OM952_00135 PF01551 Peptidase family M23 OM952_00145 PF04389 Peptidase family M28 OM952_00155 PF00150 Cellulase (glycosyl hydrolase family 5) OM952_00160 PF00150 Cellulase (glycosyl hydrolase family 5) OM952_00170 PF00150 Cellulase (glycosyl hydrolase family 5) OM952_00175 PF08240 Alcohol dehydrogenase GroES-like domain OM952_00175 PF00107 Zinc-binding dehydrogenase OM952_00190 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster OM952_00190 PF07992 Pyridine nucleotide-disulphide oxidoreductase OM952_00195 PF04898 Glutamate synthase central domain OM952_00195 PF00310 Glutamine amidotransferases class-II OM952_00195 PF01645 Conserved region in glutamate synthase OM952_00195 PF01493 GXGXG motif OM952_00220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM952_00220 PF03466 LysR substrate binding domain OM952_00285 PF00271 Helicase conserved C-terminal domain OM952_00285 PF09369 Domain of unknown function (DUF1998) OM952_00285 PF00270 DEAD/DEAH box helicase OM952_00290 PF03006 Haemolysin-III related OM952_00310 PF00106 short chain dehydrogenase OM952_00320 PF03466 LysR substrate binding domain OM952_00320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM952_00340 PF02525 Flavodoxin-like fold OM952_00350 PF05598 Transposase domain (DUF772) OM952_00350 PF01609 Transposase DDE domain OM952_00365 PF05598 Transposase domain (DUF772) OM952_00365 PF01609 Transposase DDE domain OM952_00375 PF05532 CsbD-like OM952_00400 PF02868 Thermolysin metallopeptidase, alpha-helical domain OM952_00400 PF01447 Thermolysin metallopeptidase, catalytic domain OM952_00400 PF16485 Protealysin propeptide OM952_00410 PF00293 NUDIX domain OM952_00410 PF13344 Haloacid dehalogenase-like hydrolase OM952_00425 PF00085 Thioredoxin OM952_00430 PF00083 Sugar (and other) transporter OM952_00430 PF08946 Osmosensory transporter coiled coil OM952_00475 PF07726 ATPase family associated with various cellular activities (AAA) OM952_00475 PF17863 AAA lid domain OM952_00515 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain OM952_00520 PF00155 Aminotransferase class I and II OM952_00525 PF07715 TonB-dependent Receptor Plug Domain OM952_00525 PF00593 TonB dependent receptor OM952_00545 PF02735 Ku70/Ku80 beta-barrel domain OM952_00550 PF01070 FMN-dependent dehydrogenase OM952_00555 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family OM952_00560 PF07730 Histidine kinase OM952_00565 PF00196 Bacterial regulatory proteins, luxR family OM952_00565 PF00072 Response regulator receiver domain OM952_00590 PF12241 Trans-2-enoyl-CoA reductase catalytic region OM952_00590 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase OM952_00590 PF07055 Enoyl reductase FAD binding domain OM952_00595 PF01609 Transposase DDE domain OM952_00595 PF05598 Transposase domain (DUF772) OM952_00605 PF00294 pfkB family carbohydrate kinase OM952_00660 PF00872 Transposase, Mutator family OM952_00685 PF05598 Transposase domain (DUF772) OM952_00685 PF01609 Transposase DDE domain OM952_00690 PF05598 Transposase domain (DUF772) OM952_00690 PF01609 Transposase DDE domain OM952_00705 PF00128 Alpha amylase, catalytic domain OM952_00705 PF11896 Domain of unknown function (DUF3416) OM952_00710 PF00128 Alpha amylase, catalytic domain OM952_00710 PF16657 Maltogenic Amylase, C-terminal domain OM952_00715 PF00128 Alpha amylase, catalytic domain OM952_00715 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) OM952_00715 PF02806 Alpha amylase, C-terminal all-beta domain OM952_00725 PF00248 Aldo/keto reductase family OM952_00730 PF00135 Carboxylesterase family OM952_00735 PF13472 GDSL-like Lipase/Acylhydrolase family OM952_00735 PF07859 alpha/beta hydrolase fold OM952_00745 PF03480 Bacterial extracellular solute-binding protein, family 7 OM952_00755 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component OM952_00760 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain OM952_00760 PF04616 Glycosyl hydrolases family 43 OM952_00765 PF00356 Bacterial regulatory proteins, lacI family OM952_00770 PF04962 KduI/IolB family OM952_00785 PF00657 GDSL-like Lipase/Acylhydrolase OM952_00795 PF00351 Biopterin-dependent aromatic amino acid hydroxylase OM952_00800 PF01037 Lrp/AsnC ligand binding domain OM952_00805 PF00593 TonB dependent receptor OM952_00805 PF07715 TonB-dependent Receptor Plug Domain OM952_00805 PF07660 Secretin and TonB N terminus short domain OM952_00810 PF01734 Patatin-like phospholipase OM952_00820 PF00005 ABC transporter OM952_00835 PF00005 ABC transporter OM952_00835 PF00571 CBS domain OM952_00840 PF00528 Binding-protein-dependent transport system inner membrane component OM952_00850 PF03781 Sulfatase-modifying factor enzyme 1 OM952_00850 PF12867 DinB superfamily OM952_00880 PF01883 Iron-sulfur cluster assembly protein OM952_00880 PF10609 NUBPL iron-transfer P-loop NTPase OM952_00895 PF13091 PLD-like domain OM952_00900 PF03061 Thioesterase superfamily OM952_00925 PF00107 Zinc-binding dehydrogenase OM952_00925 PF08240 Alcohol dehydrogenase GroES-like domain OM952_00935 PF02673 Bacitracin resistance protein BacA OM952_00940 PF00120 Glutamine synthetase, catalytic domain OM952_00940 PF03951 Glutamine synthetase, beta-Grasp domain OM952_00945 PF00543 Nitrogen regulatory protein P-II OM952_00950 PF00909 Ammonium Transporter Family OM952_00955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM952_00955 PF00989 PAS fold OM952_00955 PF00512 His Kinase A (phospho-acceptor) domain OM952_00960 PF00158 Sigma-54 interaction domain OM952_00960 PF02954 Bacterial regulatory protein, Fis family OM952_00960 PF00072 Response regulator receiver domain OM952_00965 PF00080 Copper/zinc superoxide dismutase (SODC) OM952_00970 PF00080 Copper/zinc superoxide dismutase (SODC) OM952_00985 PF02803 Thiolase, C-terminal domain OM952_00985 PF00108 Thiolase, N-terminal domain OM952_01020 PF00581 Rhodanese-like domain OM952_01025 PF02556 Preprotein translocase subunit SecB OM952_01030 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus OM952_01030 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus OM952_01055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM952_01060 PF00158 Sigma-54 interaction domain OM952_01060 PF02954 Bacterial regulatory protein, Fis family OM952_01060 PF00072 Response regulator receiver domain OM952_01075 PF07690 Major Facilitator Superfamily OM952_01080 PF00588 SpoU rRNA Methylase family OM952_01095 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III OM952_01095 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal OM952_01100 PF13784 Fic/DOC family N-terminal OM952_01100 PF02661 Fic/DOC family OM952_01105 PF00561 alpha/beta hydrolase fold OM952_01110 PF03692 Putative zinc- or iron-chelating domain OM952_01115 PF00501 AMP-binding enzyme OM952_01120 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family OM952_01135 PF07478 D-ala D-ala ligase C-terminus OM952_01135 PF01820 D-ala D-ala ligase N-terminus OM952_01145 PF03109 ABC1 family OM952_01155 PF00849 RNA pseudouridylate synthase OM952_01165 PF00472 RF-1 domain OM952_01175 PF01112 Asparaginase OM952_01180 PF01432 Peptidase family M3 OM952_01185 PF12706 Beta-lactamase superfamily domain OM952_01210 PF12833 Helix-turn-helix domain OM952_01215 PF00999 Sodium/hydrogen exchanger family OM952_01225 PF01274 Malate synthase OM952_01230 PF00463 Isocitrate lyase family OM952_01235 PF00990 Diguanylate cyclase, GGDEF domain OM952_01250 PF01609 Transposase DDE domain OM952_01250 PF05598 Transposase domain (DUF772) OM952_01265 PF00326 Prolyl oligopeptidase family OM952_01270 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain OM952_01270 PF18140 Propionyl-coenzyme A carboxylase BT domain OM952_01270 PF02785 Biotin carboxylase C-terminal domain OM952_01270 PF00289 Biotin carboxylase, N-terminal domain OM952_01270 PF00364 Biotin-requiring enzyme OM952_01275 PF01039 Carboxyl transferase domain OM952_01280 PF02770 Acyl-CoA dehydrogenase, middle domain OM952_01280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OM952_01280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OM952_01335 PF02492 CobW/HypB/UreG, nucleotide-binding domain OM952_01335 PF07683 Cobalamin synthesis protein cobW C-terminal domain OM952_01355 PF03969 AFG1-like ATPase OM952_01360 PF01047 MarR family OM952_01365 PF02566 OsmC-like protein OM952_01385 PF16884 N-terminal domain of oxidoreductase OM952_01385 PF00107 Zinc-binding dehydrogenase OM952_01390 PF00248 Aldo/keto reductase family OM952_01400 PF00849 RNA pseudouridylate synthase OM952_01410 PF08482 ATP-dependent helicase C-terminal OM952_01410 PF00271 Helicase conserved C-terminal domain OM952_01410 PF04408 Helicase associated domain (HA2) OM952_01410 PF00270 DEAD/DEAH box helicase OM952_01415 PF07308 Protein of unknown function (DUF1456) OM952_01420 PF00576 HIUase/Transthyretin family OM952_01425 PF13454 FAD-NAD(P)-binding OM952_01430 PF01014 Uricase OM952_01430 PF09349 OHCU decarboxylase OM952_01445 PF00266 Aminotransferase class-V OM952_01450 PF07687 Peptidase dimerisation domain OM952_01450 PF01546 Peptidase family M20/M25/M40 OM952_01455 PF03466 LysR substrate binding domain OM952_01455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM952_01460 PF00561 alpha/beta hydrolase fold OM952_01475 PF01425 Amidase OM952_01480 PF01156 Inosine-uridine preferring nucleoside hydrolase OM952_01490 PF00860 Permease family OM952_01495 PF00111 2Fe-2S iron-sulfur cluster binding domain OM952_01500 PF00355 Rieske [2Fe-2S] domain OM952_01505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM952_01505 PF03466 LysR substrate binding domain OM952_01510 PF01026 TatD related DNase OM952_01525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM952_01525 PF03466 LysR substrate binding domain OM952_01530 PF07690 Major Facilitator Superfamily OM952_01540 PF00561 alpha/beta hydrolase fold OM952_01545 PF02146 Sir2 family OM952_01550 PF00724 NADH:flavin oxidoreductase / NADH oxidase family OM952_01555 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase OM952_01555 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase OM952_01565 PF00551 Formyl transferase OM952_01570 PF00072 Response regulator receiver domain OM952_01570 PF00486 Transcriptional regulatory protein, C terminal OM952_01575 PF00512 His Kinase A (phospho-acceptor) domain OM952_01575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM952_01575 PF00672 HAMP domain OM952_01580 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OM952_01580 PF00529 HlyD membrane-fusion protein of T1SS OM952_01585 PF00873 AcrB/AcrD/AcrF family OM952_01590 PF02321 Outer membrane efflux protein OM952_01590 PF08139 Prokaryotic membrane lipoprotein lipid attachment site OM952_01605 PF02677 Epoxyqueuosine reductase QueH OM952_01610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM952_01610 PF03466 LysR substrate binding domain OM952_01615 PF03358 NADPH-dependent FMN reductase OM952_01625 PF08267 Cobalamin-independent synthase, N-terminal domain OM952_01625 PF01717 Cobalamin-independent synthase, Catalytic domain OM952_01630 PF03812 2-keto-3-deoxygluconate permease OM952_01645 PF05368 NmrA-like family OM952_01650 PF01638 HxlR-like helix-turn-helix OM952_01665 PF00872 Transposase, Mutator family OM952_01705 PF00920 Dehydratase family OM952_01720 PF00132 Bacterial transferase hexapeptide (six repeats) OM952_01730 PF07690 Major Facilitator Superfamily OM952_01735 PF01966 HD domain OM952_01735 PF11871 Domain of unknown function (DUF3391) OM952_01755 PF00171 Aldehyde dehydrogenase family OM952_01765 PF01494 FAD binding domain OM952_01775 PF02782 FGGY family of carbohydrate kinases, C-terminal domain OM952_01775 PF00370 FGGY family of carbohydrate kinases, N-terminal domain OM952_01780 PF00230 Major intrinsic protein OM952_01785 PF01266 FAD dependent oxidoreductase OM952_01785 PF16901 C-terminal domain of alpha-glycerophosphate oxidase OM952_01790 PF00455 DeoR C terminal sensor domain OM952_01790 PF08220 DeoR-like helix-turn-helix domain OM952_01795 PF00970 Oxidoreductase FAD-binding domain OM952_01795 PF00111 2Fe-2S iron-sulfur cluster binding domain OM952_01800 PF00355 Rieske [2Fe-2S] domain OM952_01805 PF01144 Coenzyme A transferase OM952_01815 PF00108 Thiolase, N-terminal domain OM952_01815 PF02803 Thiolase, C-terminal domain OM952_01820 PF00775 Dioxygenase OM952_01820 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal OM952_01830 PF00206 Lyase OM952_01830 PF10397 Adenylosuccinate lyase C-terminus OM952_01835 PF12146 Serine aminopeptidase, S33 OM952_01840 PF02627 Carboxymuconolactone decarboxylase family OM952_01850 PF09339 IclR helix-turn-helix domain OM952_01850 PF01614 Bacterial transcriptional regulator OM952_01860 PF07859 alpha/beta hydrolase fold OM952_01870 PF01134 Glucose inhibited division protein A OM952_01870 PF13932 GidA associated domain OM952_01880 PF00291 Pyridoxal-phosphate dependent enzyme OM952_01900 PF13649 Methyltransferase domain OM952_01910 PF12697 Alpha/beta hydrolase family OM952_01920 PF00155 Aminotransferase class I and II OM952_01925 PF04055 Radical SAM superfamily OM952_01925 PF06968 Biotin and Thiamin Synthesis associated domain OM952_01935 PF01040 UbiA prenyltransferase family OM952_01950 PF05819 NolX protein OM952_01955 PF05598 Transposase domain (DUF772) OM952_01955 PF01609 Transposase DDE domain OM952_01960 PF00872 Transposase, Mutator family OM952_02000 PF01313 Bacterial export proteins, family 3 OM952_02005 PF00813 FliP family OM952_02020 PF00771 FHIPEP family OM952_02025 PF01312 FlhB HrpN YscU SpaS Family OM952_02040 PF01514 Secretory protein of YscJ/FliF family OM952_02055 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain OM952_02055 PF18269 T3SS EscN ATPase C-terminal domain OM952_02055 PF02874 ATP synthase alpha/beta family, beta-barrel domain OM952_02065 PF01311 Bacterial export proteins, family 1 OM952_02070 PF00263 Bacterial type II and III secretion system protein OM952_02070 PF03958 Bacterial type II/III secretion system short domain OM952_02080 PF01464 Transglycosylase SLT domain OM952_02095 PF00924 Mechanosensitive ion channel OM952_02095 PF12795 Mechanosensitive ion channel porin domain OM952_02095 PF12794 Mechanosensitive ion channel inner membrane domain 1 OM952_02100 PF00884 Sulfatase OM952_02105 PF03109 ABC1 family OM952_02110 PF05661 Protein of unknown function (DUF808) OM952_02115 PF00990 Diguanylate cyclase, GGDEF domain OM952_02120 PF00534 Glycosyl transferases group 1 OM952_02120 PF08323 Starch synthase catalytic domain OM952_02125 PF00128 Alpha amylase, catalytic domain OM952_02125 PF02806 Alpha amylase, C-terminal all-beta domain OM952_02125 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) OM952_02130 PF00128 Alpha amylase, catalytic domain OM952_02130 PF11941 Domain of unknown function (DUF3459) OM952_02130 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) OM952_02135 PF02446 4-alpha-glucanotransferase OM952_02140 PF00128 Alpha amylase, catalytic domain OM952_02150 PF00128 Alpha amylase, catalytic domain OM952_02150 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) OM952_02155 PF13460 NAD(P)H-binding OM952_02165 PF03150 Di-haem cytochrome c peroxidase OM952_02185 PF00872 Transposase, Mutator family OM952_02195 PF01609 Transposase DDE domain OM952_02195 PF05598 Transposase domain (DUF772) OM952_02220 PF06903 VirK protein OM952_02225 PF02321 Outer membrane efflux protein OM952_02240 PF00873 AcrB/AcrD/AcrF family OM952_02255 PF00270 DEAD/DEAH box helicase OM952_02255 PF00271 Helicase conserved C-terminal domain OM952_02260 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) OM952_02260 PF00364 Biotin-requiring enzyme OM952_02270 PF02779 Transketolase, pyrimidine binding domain OM952_02270 PF02780 Transketolase, C-terminal domain OM952_02275 PF00676 Dehydrogenase E1 component OM952_02285 PF03301 Tryptophan 2,3-dioxygenase OM952_02290 PF00854 POT family OM952_02300 PF01047 MarR family OM952_02305 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily OM952_02310 PF04480 Protein of unknown function (DUF559) OM952_02315 PF04209 homogentisate 1,2-dioxygenase OM952_02335 PF03334 Na+/H+ antiporter subunit OM952_02340 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) OM952_02350 PF00361 Proton-conducting membrane transporter OM952_02355 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L OM952_02360 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus OM952_02360 PF00361 Proton-conducting membrane transporter OM952_02360 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter OM952_02360 PF13244 Domain of unknown function (DUF4040) OM952_02375 PF07504 Fungalysin/Thermolysin Propeptide Motif OM952_02375 PF01447 Thermolysin metallopeptidase, catalytic domain OM952_02375 PF02868 Thermolysin metallopeptidase, alpha-helical domain OM952_02375 PF01483 Proprotein convertase P-domain OM952_02380 PF00182 Chitinase class I OM952_02400 PF01259 SAICAR synthetase OM952_02405 PF00226 DnaJ domain OM952_02405 PF05099 Tellurite resistance protein TerB OM952_02415 PF00834 Ribulose-phosphate 3 epimerase family OM952_02425 PF00781 Diacylglycerol kinase catalytic domain OM952_02430 PF04715 Anthranilate synthase component I, N terminal region OM952_02430 PF00425 chorismate binding enzyme OM952_02445 PF00117 Glutamine amidotransferase class-I OM952_02455 PF02885 Glycosyl transferase family, helical bundle domain OM952_02455 PF00591 Glycosyl transferase family, a/b domain OM952_02460 PF00218 Indole-3-glycerol phosphate synthase OM952_02470 PF00027 Cyclic nucleotide-binding domain OM952_02470 PF00325 Bacterial regulatory proteins, crp family OM952_02475 PF02675 S-adenosylmethionine decarboxylase OM952_02480 PF00893 Small Multidrug Resistance protein OM952_02485 PF03232 Ubiquinone biosynthesis protein COQ7 OM952_02490 PF00572 Ribosomal protein L13 OM952_02495 PF00380 Ribosomal protein S9/S16 OM952_02510 PF00293 NUDIX domain OM952_02520 PF00210 Ferritin-like domain OM952_02525 PF00512 His Kinase A (phospho-acceptor) domain OM952_02525 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) OM952_02525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM952_02525 PF00672 HAMP domain OM952_02525 PF01627 Hpt domain OM952_02525 PF00072 Response regulator receiver domain OM952_02530 PF00072 Response regulator receiver domain OM952_02530 PF00486 Transcriptional regulatory protein, C terminal OM952_02550 PF01521 Iron-sulphur cluster biosynthesis OM952_02560 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain OM952_02560 PF09297 NADH pyrophosphatase zinc ribbon domain OM952_02560 PF00293 NUDIX domain OM952_02565 PF17113 Regulatory signalling modulator protein AmpE OM952_02565 PF03186 CobD/Cbib protein OM952_02580 PF07690 Major Facilitator Superfamily OM952_02585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM952_02585 PF03466 LysR substrate binding domain OM952_02590 PF07690 Major Facilitator Superfamily OM952_02595 PF12805 FUSC-like inner membrane protein yccS OM952_02605 PF02844 Phosphoribosylglycinamide synthetase, N domain OM952_02605 PF02843 Phosphoribosylglycinamide synthetase, C domain OM952_02605 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain OM952_02615 PF01808 AICARFT/IMPCHase bienzyme OM952_02615 PF02142 MGS-like domain OM952_02620 PF01066 CDP-alcohol phosphatidyltransferase OM952_02625 PF12147 Putative methyltransferase OM952_02625 PF12146 Serine aminopeptidase, S33 OM952_02630 PF00782 Dual specificity phosphatase, catalytic domain OM952_02660 PF02954 Bacterial regulatory protein, Fis family OM952_02670 PF01381 Helix-turn-helix OM952_02695 PF02785 Biotin carboxylase C-terminal domain OM952_02695 PF00289 Biotin carboxylase, N-terminal domain OM952_02695 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain OM952_02705 PF00364 Biotin-requiring enzyme OM952_02710 PF01220 Dehydroquinase class II OM952_02715 PF11412 Disulphide bond corrector protein DsbC OM952_02715 PF02683 Cytochrome C biogenesis protein transmembrane region OM952_02720 PF03091 CutA1 divalent ion tolerance protein OM952_02735 PF00166 Chaperonin 10 Kd subunit OM952_02740 PF00118 TCP-1/cpn60 chaperonin family OM952_02750 PF07715 TonB-dependent Receptor Plug Domain OM952_02750 PF00593 TonB dependent receptor OM952_02755 PF07804 HipA-like C-terminal domain OM952_02760 PF00793 DAHP synthetase I family OM952_02775 PF08450 SMP-30/Gluconolactonase/LRE-like region OM952_02785 PF08335 GlnD PII-uridylyltransferase OM952_02785 PF03710 Glutamate-ammonia ligase adenylyltransferase OM952_02790 PF02592 Putative vitamin uptake transporter OM952_02810 PF05598 Transposase domain (DUF772) OM952_02810 PF01609 Transposase DDE domain OM952_02830 PF00881 Nitroreductase family OM952_02835 PF04264 YceI-like domain OM952_02865 PF16957 Malonate decarboxylase, alpha subunit, transporter OM952_02870 PF06857 Malonate decarboxylase delta subunit (MdcD) OM952_02875 PF01039 Carboxyl transferase domain OM952_02885 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG OM952_02890 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase OM952_02895 PF00698 Acyl transferase domain OM952_02905 PF07729 FCD domain OM952_02905 PF00392 Bacterial regulatory proteins, gntR family OM952_02945 PF07745 Glycosyl hydrolase family 53 OM952_02950 PF17831 Pyruvate dehydrogenase E1 component middle domain OM952_02950 PF00456 Transketolase, thiamine diphosphate binding domain OM952_02960 PF00872 Transposase, Mutator family OM952_02970 PF00106 short chain dehydrogenase OM952_02980 PF01609 Transposase DDE domain OM952_02980 PF05598 Transposase domain (DUF772) OM952_03010 PF00106 short chain dehydrogenase OM952_03020 PF13409 Glutathione S-transferase, N-terminal domain OM952_03075 PF07759 Protein of unknown function (DUF1615) OM952_03080 PF00990 Diguanylate cyclase, GGDEF domain OM952_03085 PF02082 Transcriptional regulator OM952_03090 PF07992 Pyridine nucleotide-disulphide oxidoreductase OM952_03110 PF00892 EamA-like transporter family OM952_03115 PF03330 Lytic transglycolase OM952_03120 PF01341 Glycosyl hydrolases family 6 OM952_03120 PF00553 Cellulose binding domain OM952_03120 PF00041 Fibronectin type III domain OM952_03130 PF00324 Amino acid permease OM952_03140 PF01544 CorA-like Mg2+ transporter protein OM952_03155 PF01204 Trehalase OM952_03165 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain OM952_03165 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain OM952_03185 PF08448 PAS fold OM952_03185 PF00563 EAL domain OM952_03185 PF00990 Diguanylate cyclase, GGDEF domain OM952_03185 PF05231 MASE1 OM952_03185 PF08447 PAS fold OM952_03185 PF13426 PAS domain OM952_03195 PF09456 RcsC Alpha-Beta-Loop (ABL) OM952_03195 PF00512 His Kinase A (phospho-acceptor) domain OM952_03195 PF00072 Response regulator receiver domain OM952_03195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM952_03205 PF03797 Autotransporter beta-domain OM952_03225 PF13632 Glycosyl transferase family group 2 OM952_03235 PF07694 5TMR of 5TMR-LYT OM952_03235 PF06580 Histidine kinase OM952_03240 PF04397 LytTr DNA-binding domain OM952_03240 PF00072 Response regulator receiver domain OM952_03245 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain OM952_03245 PF03900 Porphobilinogen deaminase, C-terminal domain OM952_03280 PF00326 Prolyl oligopeptidase family OM952_03280 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain OM952_03290 PF00155 Aminotransferase class I and II OM952_03295 PF00326 Prolyl oligopeptidase family OM952_03295 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain OM952_03300 PF04304 Protein of unknown function (DUF454) OM952_03310 PF01678 Diaminopimelate epimerase OM952_03320 PF00589 Phage integrase family OM952_03320 PF02899 Phage integrase, N-terminal SAM-like domain OM952_03325 PF00227 Proteasome subunit OM952_03330 PF00004 ATPase family associated with various cellular activities (AAA) OM952_03330 PF07724 AAA domain (Cdc48 subfamily) OM952_03330 PF10431 C-terminal, D2-small domain, of ClpB protein OM952_03340 PF13673 Acetyltransferase (GNAT) domain OM952_03345 PF13533 Biotin-lipoyl like OM952_03355 PF01209 ubiE/COQ5 methyltransferase family OM952_03360 PF03707 Bacterial signalling protein N terminal repeat OM952_03360 PF00990 Diguanylate cyclase, GGDEF domain OM952_03360 PF00563 EAL domain OM952_03365 PF11838 ERAP1-like C-terminal domain OM952_03365 PF01433 Peptidase family M1 domain OM952_03380 PF13360 PQQ-like domain OM952_03385 PF00497 Bacterial extracellular solute-binding proteins, family 3 OM952_03400 PF08240 Alcohol dehydrogenase GroES-like domain OM952_03400 PF00107 Zinc-binding dehydrogenase OM952_03410 PF01590 GAF domain OM952_03410 PF02954 Bacterial regulatory protein, Fis family OM952_03410 PF00158 Sigma-54 interaction domain OM952_03425 PF00294 pfkB family carbohydrate kinase OM952_03435 PF04085 rod shape-determining protein MreC OM952_03445 PF03717 Penicillin-binding Protein dimerisation domain OM952_03445 PF00905 Penicillin binding protein transpeptidase domain OM952_03450 PF01098 Cell cycle protein OM952_03455 PF02534 Type IV secretory system Conjugative DNA transfer OM952_03465 PF05598 Transposase domain (DUF772) OM952_03465 PF01609 Transposase DDE domain OM952_03495 PF00295 Glycosyl hydrolases family 28 OM952_03500 PF13406 Transglycosylase SLT domain OM952_03505 PF03330 Lytic transglycolase OM952_03505 PF05036 Sporulation related domain OM952_03510 PF00768 D-alanyl-D-alanine carboxypeptidase OM952_03510 PF07943 Penicillin-binding protein 5, C-terminal domain OM952_03520 PF04359 Protein of unknown function (DUF493) OM952_03525 PF03099 Biotin/lipoate A/B protein ligase family OM952_03530 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family OM952_03530 PF04055 Radical SAM superfamily OM952_03535 PF11818 C-terminal domain of tail specific protease (DUF3340) OM952_03535 PF00595 PDZ domain OM952_03535 PF03572 Peptidase family S41 OM952_03535 PF17804 Tail specific protease N-terminal domain OM952_03545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM952_03545 PF03466 LysR substrate binding domain OM952_03555 PF01467 Cytidylyltransferase-like OM952_03555 PF00293 NUDIX domain OM952_03590 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase OM952_03590 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain OM952_03595 PF02894 Oxidoreductase family, C-terminal alpha/beta domain OM952_03595 PF01408 Oxidoreductase family, NAD-binding Rossmann fold OM952_03600 PF04972 BON domain OM952_03605 PF00512 His Kinase A (phospho-acceptor) domain OM952_03605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM952_03605 PF00360 Phytochrome region OM952_03605 PF01590 GAF domain OM952_03605 PF08446 PAS fold OM952_03610 PF00072 Response regulator receiver domain OM952_03615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM952_03615 PF00512 His Kinase A (phospho-acceptor) domain OM952_03620 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) OM952_03665 PF00263 Bacterial type II and III secretion system protein OM952_03665 PF03958 Bacterial type II/III secretion system short domain OM952_03670 PF00437 Type II/IV secretion system protein OM952_03675 PF00482 Type II secretion system (T2SS), protein F OM952_03680 PF07963 Prokaryotic N-terminal methylation motif OM952_03680 PF08334 Type II secretion system (T2SS), protein G OM952_03685 PF07963 Prokaryotic N-terminal methylation motif OM952_03685 PF12019 Type II transport protein GspH OM952_03690 PF02501 Type II secretion system (T2SS), protein I OM952_03690 PF07963 Prokaryotic N-terminal methylation motif OM952_03695 PF07963 Prokaryotic N-terminal methylation motif OM952_03695 PF11612 Type II secretion system (T2SS), protein J OM952_03700 PF03934 Type II secretion system (T2SS), protein K OM952_03720 PF00392 Bacterial regulatory proteins, gntR family OM952_03720 PF07702 UTRA domain OM952_03725 PF07690 Major Facilitator Superfamily OM952_03730 PF00356 Bacterial regulatory proteins, lacI family OM952_03735 PF01380 SIS domain OM952_03740 PF01979 Amidohydrolase family OM952_03750 PF01743 Poly A polymerase head domain OM952_03750 PF12627 Probable RNA and SrmB- binding site of polymerase A OM952_03750 PF01966 HD domain OM952_03755 PF01464 Transglycosylase SLT domain OM952_03755 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain OM952_03760 PF07715 TonB-dependent Receptor Plug Domain OM952_03760 PF00593 TonB dependent receptor OM952_03765 PF08264 Anticodon-binding domain of tRNA OM952_03765 PF00133 tRNA synthetases class I (I, L, M and V) OM952_03765 PF10458 Valyl tRNA synthetase tRNA binding arm OM952_03780 PF00883 Cytosol aminopeptidase family, catalytic domain OM952_03780 PF02789 Cytosol aminopeptidase family, N-terminal domain OM952_03790 PF03739 Lipopolysaccharide export system permease LptF/LptG OM952_03805 PF02899 Phage integrase, N-terminal SAM-like domain OM952_03805 PF00589 Phage integrase family OM952_03815 PF10411 Disulfide bond isomerase protein N-terminus OM952_03815 PF13098 Thioredoxin-like domain OM952_03820 PF02769 AIR synthase related protein, C-terminal domain OM952_03820 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain OM952_03820 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal OM952_03825 PF05662 Coiled stalk of trimeric autotransporter adhesin OM952_03825 PF05658 Head domain of trimeric autotransporter adhesin OM952_03825 PF03895 YadA-like membrane anchor domain OM952_03825 PF13018 Extended Signal Peptide of Type V secretion system OM952_03830 PF00082 Subtilase family OM952_03830 PF04151 Bacterial pre-peptidase C-terminal domain OM952_03835 PF05662 Coiled stalk of trimeric autotransporter adhesin OM952_03835 PF05658 Head domain of trimeric autotransporter adhesin OM952_03835 PF03895 YadA-like membrane anchor domain OM952_03835 PF13018 Extended Signal Peptide of Type V secretion system OM952_03840 PF00082 Subtilase family OM952_03840 PF04151 Bacterial pre-peptidase C-terminal domain OM952_03845 PF00437 Type II/IV secretion system protein OM952_03845 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain OM952_03850 PF00482 Type II secretion system (T2SS), protein F OM952_03855 PF08334 Type II secretion system (T2SS), protein G OM952_03860 PF12019 Type II transport protein GspH OM952_03865 PF07963 Prokaryotic N-terminal methylation motif OM952_03875 PF03934 Type II secretion system (T2SS), protein K OM952_03880 PF05137 Fimbrial assembly protein (PilN) OM952_03885 PF10741 Type II secretion system (T2SS), protein M subtype b OM952_03895 PF00263 Bacterial type II and III secretion system protein OM952_03895 PF03958 Bacterial type II/III secretion system short domain OM952_03905 PF00392 Bacterial regulatory proteins, gntR family OM952_03905 PF07702 UTRA domain OM952_03915 PF00593 TonB dependent receptor OM952_03915 PF07715 TonB-dependent Receptor Plug Domain OM952_03975 PF07238 PilZ domain OM952_03975 PF00535 Glycosyl transferase family 2 OM952_03975 PF03552 Cellulose synthase OM952_03980 PF03170 Bacterial cellulose synthase subunit OM952_03985 PF01270 Glycosyl hydrolases family 8 OM952_04005 PF03960 ArsC family OM952_04010 PF01327 Polypeptide deformylase OM952_04015 PF00005 ABC transporter OM952_04015 PF12848 ABC transporter OM952_04025 PF00464 Serine hydroxymethyltransferase OM952_04030 PF03477 ATP cone domain OM952_04040 PF01872 RibD C-terminal domain OM952_04040 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region OM952_04050 PF00677 Lumazine binding domain OM952_04055 PF00925 GTP cyclohydrolase II OM952_04055 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase OM952_04060 PF00885 6,7-dimethyl-8-ribityllumazine synthase OM952_04065 PF01029 NusB family OM952_04070 PF00586 AIR synthase related protein, N-terminal domain OM952_04070 PF02769 AIR synthase related protein, C-terminal domain OM952_04085 PF03814 Potassium-transporting ATPase A subunit OM952_04095 PF02669 K+-transporting ATPase, c chain OM952_04100 PF00512 His Kinase A (phospho-acceptor) domain OM952_04100 PF13493 Domain of unknown function (DUF4118) OM952_04100 PF13492 GAF domain OM952_04100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM952_04100 PF02702 Osmosensitive K+ channel His kinase sensor domain OM952_04105 PF00486 Transcriptional regulatory protein, C terminal OM952_04105 PF00072 Response regulator receiver domain OM952_04115 PF02913 FAD linked oxidases, C-terminal domain OM952_04115 PF01565 FAD binding domain OM952_04120 PF04307 LexA-binding, inner membrane-associated putative hydrolase OM952_04125 PF02021 Uncharacterised protein family UPF0102 OM952_04130 PF04348 LppC putative lipoprotein OM952_04135 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases OM952_04155 PF02381 MraZ protein, putative antitoxin-like OM952_04160 PF01795 MraW methylase family OM952_04165 PF04999 Cell division protein FtsL OM952_04170 PF03717 Penicillin-binding Protein dimerisation domain OM952_04170 PF00905 Penicillin binding protein transpeptidase domain OM952_04175 PF08245 Mur ligase middle domain OM952_04175 PF01225 Mur ligase family, catalytic domain OM952_04175 PF02875 Mur ligase family, glutamate ligase domain OM952_04180 PF01225 Mur ligase family, catalytic domain OM952_04180 PF08245 Mur ligase middle domain OM952_04180 PF02875 Mur ligase family, glutamate ligase domain OM952_04185 PF00953 Glycosyl transferase family 4 OM952_04190 PF01098 Cell cycle protein OM952_04195 PF03033 Glycosyltransferase family 28 N-terminal domain OM952_04195 PF04101 Glycosyltransferase family 28 C-terminal domain OM952_04200 PF08245 Mur ligase middle domain OM952_04200 PF02875 Mur ligase family, glutamate ligase domain OM952_04200 PF01225 Mur ligase family, catalytic domain OM952_04205 PF01820 D-ala D-ala ligase N-terminus OM952_04205 PF07478 D-ala D-ala ligase C-terminus OM952_04210 PF08478 POTRA domain, FtsQ-type OM952_04210 PF03799 Cell division protein FtsQ OM952_04215 PF02491 SHS2 domain inserted in FTSA OM952_04220 PF12327 FtsZ family, C-terminal domain OM952_04220 PF00091 Tubulin/FtsZ family, GTPase domain OM952_04225 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase OM952_04235 PF01476 LysM domain OM952_04235 PF08525 Opacity-associated protein A N-terminal motif OM952_04235 PF01551 Peptidase family M23 OM952_04240 PF07517 SecA DEAD-like domain OM952_04240 PF07516 SecA Wing and Scaffold domain OM952_04240 PF01043 SecA preprotein cross-linking domain OM952_04240 PF02810 SEC-C motif OM952_04245 PF00293 NUDIX domain OM952_04255 PF02219 Methylenetetrahydrofolate reductase OM952_04265 PF14765 Polyketide synthase dehydratase OM952_04265 PF08659 KR domain OM952_04265 PF16197 Ketoacyl-synthetase C-terminal extension OM952_04265 PF00109 Beta-ketoacyl synthase, N-terminal domain OM952_04265 PF00698 Acyl transferase domain OM952_04265 PF08240 Alcohol dehydrogenase GroES-like domain OM952_04265 PF00107 Zinc-binding dehydrogenase OM952_04265 PF00550 Phosphopantetheine attachment site OM952_04265 PF02801 Beta-ketoacyl synthase, C-terminal domain OM952_04270 PF09286 Pro-kumamolisin, activation domain OM952_04270 PF00082 Subtilase family OM952_04275 PF01408 Oxidoreductase family, NAD-binding Rossmann fold OM952_04280 PF00128 Alpha amylase, catalytic domain OM952_04305 PF00685 Sulfotransferase domain OM952_04315 PF13649 Methyltransferase domain OM952_04320 PF05221 S-adenosyl-L-homocysteine hydrolase OM952_04320 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain OM952_04330 PF00311 Phosphoenolpyruvate carboxylase OM952_04350 PF00691 OmpA family OM952_04350 PF01389 OmpA-like transmembrane domain OM952_04365 PF00328 Histidine phosphatase superfamily (branch 2) OM952_04370 PF02773 S-adenosylmethionine synthetase, C-terminal domain OM952_04370 PF02772 S-adenosylmethionine synthetase, central domain OM952_04370 PF00438 S-adenosylmethionine synthetase, N-terminal domain OM952_04380 PF13649 Methyltransferase domain OM952_04385 PF01207 Dihydrouridine synthase (Dus) OM952_04400 PF00294 pfkB family carbohydrate kinase OM952_04405 PF07670 Nucleoside recognition OM952_04405 PF07662 Na+ dependent nucleoside transporter C-terminus OM952_04405 PF01773 Na+ dependent nucleoside transporter N-terminus OM952_04410 PF00248 Aldo/keto reductase family OM952_04420 PF07715 TonB-dependent Receptor Plug Domain OM952_04420 PF00593 TonB dependent receptor OM952_04440 PF00528 Binding-protein-dependent transport system inner membrane component OM952_04445 PF00005 ABC transporter OM952_04455 PF02668 Taurine catabolism dioxygenase TauD, TfdA family OM952_04465 PF00005 ABC transporter OM952_04470 PF13472 GDSL-like Lipase/Acylhydrolase family OM952_04475 PF00072 Response regulator receiver domain OM952_04475 PF00486 Transcriptional regulatory protein, C terminal OM952_04480 PF08521 Two-component sensor kinase N-terminal OM952_04480 PF00512 His Kinase A (phospho-acceptor) domain OM952_04480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM952_04490 PF01219 Prokaryotic diacylglycerol kinase OM952_04500 PF04536 TPM domain OM952_04510 PF01790 Prolipoprotein diacylglyceryl transferase OM952_04515 PF00303 Thymidylate synthase OM952_04525 PF00186 Dihydrofolate reductase OM952_04530 PF00149 Calcineurin-like phosphoesterase OM952_04535 PF04379 ApaG domain OM952_04540 PF00398 Ribosomal RNA adenine dimethylase OM952_04545 PF04166 Pyridoxal phosphate biosynthetic protein PdxA OM952_04550 PF00639 PPIC-type PPIASE domain OM952_04550 PF09312 SurA N-terminal domain OM952_04555 PF04453 LPS transport system D OM952_04555 PF03968 OstA-like protein OM952_04565 PF00850 Histone deacetylase domain OM952_04570 PF01923 Cobalamin adenosyltransferase OM952_04580 PF01494 FAD binding domain OM952_04585 PF01494 FAD binding domain OM952_04605 PF07729 FCD domain OM952_04605 PF00392 Bacterial regulatory proteins, gntR family OM952_04610 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase OM952_04615 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit OM952_04615 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase OM952_04620 PF03466 LysR substrate binding domain OM952_04620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM952_04625 PF00501 AMP-binding enzyme OM952_04625 PF13193 AMP-binding enzyme C-terminal domain OM952_04635 PF00378 Enoyl-CoA hydratase/isomerase OM952_04655 PF08450 SMP-30/Gluconolactonase/LRE-like region OM952_04660 PF02894 Oxidoreductase family, C-terminal alpha/beta domain OM952_04660 PF01408 Oxidoreductase family, NAD-binding Rossmann fold OM952_04665 PF18125 RlmM ferredoxin-like domain OM952_04665 PF01728 FtsJ-like methyltransferase OM952_04690 PF00892 EamA-like transporter family OM952_04700 PF00749 tRNA synthetases class I (E and Q), catalytic domain OM952_04700 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain OM952_04715 PF00072 Response regulator receiver domain OM952_04715 PF00990 Diguanylate cyclase, GGDEF domain OM952_04720 PF00512 His Kinase A (phospho-acceptor) domain OM952_04720 PF00072 Response regulator receiver domain OM952_04720 PF01627 Hpt domain OM952_04720 PF00672 HAMP domain OM952_04720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM952_04720 PF17149 Periplasmic sensor domain found in signal transduction proteins OM952_04725 PF00072 Response regulator receiver domain OM952_04725 PF00196 Bacterial regulatory proteins, luxR family OM952_04735 PF01625 Peptide methionine sulfoxide reductase OM952_04750 PF00923 Transaldolase/Fructose-6-phosphate aldolase OM952_04755 PF14760 Rnk N-terminus OM952_04755 PF01272 Transcription elongation factor, GreA/GreB, C-term OM952_04760 PF03466 LysR substrate binding domain OM952_04760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM952_04765 PF07992 Pyridine nucleotide-disulphide oxidoreductase OM952_04765 PF13192 Thioredoxin domain OM952_04770 PF10417 C-terminal domain of 1-Cys peroxiredoxin OM952_04770 PF00578 AhpC/TSA family OM952_04775 PF05175 Methyltransferase small domain OM952_04775 PF17827 PrmC N-terminal domain OM952_04780 PF00561 alpha/beta hydrolase fold OM952_04790 PF00293 NUDIX domain OM952_04795 PF01367 5'-3' exonuclease, C-terminal SAM fold OM952_04795 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain OM952_04795 PF00476 DNA polymerase family A OM952_04795 PF01612 3'-5' exonuclease OM952_04850 PF01063 Amino-transferase class IV OM952_04855 PF04151 Bacterial pre-peptidase C-terminal domain OM952_04855 PF00082 Subtilase family OM952_04860 PF04151 Bacterial pre-peptidase C-terminal domain OM952_04860 PF00082 Subtilase family OM952_04865 PF00082 Subtilase family OM952_04865 PF04151 Bacterial pre-peptidase C-terminal domain OM952_04870 PF04073 Aminoacyl-tRNA editing domain OM952_04880 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain OM952_04880 PF17189 Glycosyl hydrolase family 30 beta sandwich domain OM952_04890 PF03358 NADPH-dependent FMN reductase OM952_04895 PF03631 Virulence factor BrkB OM952_04900 PF08534 Redoxin OM952_04905 PF00708 Acylphosphatase OM952_04915 PF03976 Polyphosphate kinase 2 (PPK2) OM952_04920 PF00994 Probable molybdopterin binding domain OM952_04930 PF03462 PCRF domain OM952_04930 PF00472 RF-1 domain OM952_04935 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain OM952_04935 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain OM952_04935 PF01488 Shikimate / quinate 5-dehydrogenase OM952_04945 PF03550 Outer membrane lipoprotein LolB OM952_04950 PF08544 GHMP kinases C terminal OM952_04950 PF00288 GHMP kinases N terminal domain OM952_04960 PF14572 Phosphoribosyl synthetase-associated domain OM952_04960 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase OM952_04965 PF01386 Ribosomal L25p family OM952_04965 PF14693 Ribosomal protein TL5, C-terminal domain OM952_04970 PF01195 Peptidyl-tRNA hydrolase OM952_04975 PF01926 50S ribosome-binding GTPase OM952_04975 PF06071 Protein of unknown function (DUF933) OM952_04995 PF00009 Elongation factor Tu GTP binding domain OM952_04995 PF03144 Elongation factor Tu domain 2 OM952_04995 PF03143 Elongation factor Tu C-terminal domain OM952_05005 PF00584 SecE/Sec61-gamma subunits of protein translocation complex OM952_05010 PF00467 KOW motif OM952_05010 PF02357 Transcription termination factor nusG OM952_05015 PF03946 Ribosomal protein L11, N-terminal domain OM952_05015 PF00298 Ribosomal protein L11, RNA binding domain OM952_05020 PF00687 Ribosomal protein L1p/L10e family OM952_05025 PF00466 Ribosomal protein L10 OM952_05030 PF00542 Ribosomal protein L7/L12 C-terminal domain OM952_05030 PF16320 Ribosomal protein L7/L12 dimerisation domain OM952_05035 PF04563 RNA polymerase beta subunit OM952_05035 PF04561 RNA polymerase Rpb2, domain 2 OM952_05035 PF04565 RNA polymerase Rpb2, domain 3 OM952_05035 PF10385 RNA polymerase beta subunit external 1 domain OM952_05035 PF00562 RNA polymerase Rpb2, domain 6 OM952_05035 PF04560 RNA polymerase Rpb2, domain 7 OM952_05040 PF04998 RNA polymerase Rpb1, domain 5 OM952_05040 PF04983 RNA polymerase Rpb1, domain 3 OM952_05040 PF04997 RNA polymerase Rpb1, domain 1 OM952_05040 PF00623 RNA polymerase Rpb1, domain 2 OM952_05040 PF05000 RNA polymerase Rpb1, domain 4 OM952_05045 PF00164 Ribosomal protein S12/S23 OM952_05050 PF00177 Ribosomal protein S7p/S5e OM952_05055 PF00679 Elongation factor G C-terminus OM952_05055 PF14492 Elongation Factor G, domain II OM952_05055 PF03764 Elongation factor G, domain IV OM952_05055 PF00009 Elongation factor Tu GTP binding domain OM952_05055 PF03144 Elongation factor Tu domain 2 OM952_05060 PF03144 Elongation factor Tu domain 2 OM952_05060 PF03143 Elongation factor Tu C-terminal domain OM952_05060 PF00009 Elongation factor Tu GTP binding domain OM952_05080 PF00872 Transposase, Mutator family OM952_05085 PF00338 Ribosomal protein S10p/S20e OM952_05090 PF00297 Ribosomal protein L3 OM952_05095 PF00573 Ribosomal protein L4/L1 family OM952_05100 PF00276 Ribosomal protein L23 OM952_05105 PF00181 Ribosomal Proteins L2, RNA binding domain OM952_05105 PF03947 Ribosomal Proteins L2, C-terminal domain OM952_05110 PF00203 Ribosomal protein S19 OM952_05115 PF00237 Ribosomal protein L22p/L17e OM952_05120 PF07650 KH domain OM952_05120 PF00189 Ribosomal protein S3, C-terminal domain OM952_05125 PF00252 Ribosomal protein L16p/L10e OM952_05130 PF00831 Ribosomal L29 protein OM952_05135 PF00366 Ribosomal protein S17 OM952_05140 PF00238 Ribosomal protein L14p/L23e OM952_05145 PF00467 KOW motif OM952_05145 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 OM952_05150 PF00281 Ribosomal protein L5 OM952_05150 PF00673 ribosomal L5P family C-terminus OM952_05155 PF00253 Ribosomal protein S14p/S29e OM952_05160 PF00410 Ribosomal protein S8 OM952_05165 PF00347 Ribosomal protein L6 OM952_05170 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast OM952_05175 PF00333 Ribosomal protein S5, N-terminal domain OM952_05175 PF03719 Ribosomal protein S5, C-terminal domain OM952_05180 PF00327 Ribosomal protein L30p/L7e OM952_05185 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A OM952_05190 PF00344 SecY translocase OM952_05195 PF00416 Ribosomal protein S13/S18 OM952_05200 PF00411 Ribosomal protein S11 OM952_05205 PF00163 Ribosomal protein S4/S9 N-terminal domain OM952_05205 PF01479 S4 domain OM952_05210 PF01000 RNA polymerase Rpb3/RpoA insert domain OM952_05210 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain OM952_05210 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain OM952_05215 PF01196 Ribosomal protein L17 OM952_05220 PF02600 Disulfide bond formation protein DsbB OM952_05240 PF01474 Class-II DAHP synthetase family OM952_05250 PF01425 Amidase OM952_05260 PF00679 Elongation factor G C-terminus OM952_05260 PF00009 Elongation factor Tu GTP binding domain OM952_05260 PF03144 Elongation factor Tu domain 2 OM952_05265 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD OM952_05270 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain OM952_05270 PF00056 lactate/malate dehydrogenase, NAD binding domain OM952_05275 PF00043 Glutathione S-transferase, C-terminal domain OM952_05275 PF02798 Glutathione S-transferase, N-terminal domain OM952_05290 PF07992 Pyridine nucleotide-disulphide oxidoreductase OM952_05290 PF00724 NADH:flavin oxidoreductase / NADH oxidase family OM952_05295 PF08240 Alcohol dehydrogenase GroES-like domain OM952_05295 PF00107 Zinc-binding dehydrogenase OM952_05300 PF00872 Transposase, Mutator family OM952_05305 PF01609 Transposase DDE domain OM952_05305 PF05598 Transposase domain (DUF772) OM952_05310 PF00223 Photosystem I psaA/psaB protein OM952_05310 PF00691 OmpA family OM952_05320 PF00849 RNA pseudouridylate synthase OM952_05330 PF00155 Aminotransferase class I and II OM952_05340 PF00528 Binding-protein-dependent transport system inner membrane component OM952_05345 PF00528 Binding-protein-dependent transport system inner membrane component OM952_05350 PF00005 ABC transporter OM952_05350 PF17850 CysA C-terminal regulatory domain OM952_05350 PF12857 TOBE-like domain OM952_05365 PF00872 Transposase, Mutator family OM952_05370 PF00107 Zinc-binding dehydrogenase OM952_05370 PF08240 Alcohol dehydrogenase GroES-like domain OM952_05380 PF05506 Domain of unknown function (DUF756) OM952_05380 PF04185 Phosphoesterase family OM952_05385 PF10459 Peptidase S46 OM952_05390 PF00300 Histidine phosphatase superfamily (branch 1) OM952_05400 PF02875 Mur ligase family, glutamate ligase domain OM952_05400 PF08245 Mur ligase middle domain OM952_05415 PF00156 Phosphoribosyl transferase domain OM952_05420 PF04305 Protein of unknown function (DUF455) OM952_05435 PF00149 Calcineurin-like phosphoesterase OM952_05440 PF01569 PAP2 superfamily OM952_05445 PF13439 Glycosyltransferase Family 4 OM952_05445 PF00534 Glycosyl transferases group 1 OM952_05450 PF02541 Ppx/GppA phosphatase family OM952_05455 PF13089 Polyphosphate kinase N-terminal domain OM952_05455 PF02503 Polyphosphate kinase middle domain OM952_05455 PF17941 Polyphosphate kinase C-terminal domain 1 OM952_05455 PF13090 Polyphosphate kinase C-terminal domain 2 OM952_05460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM952_05460 PF00512 His Kinase A (phospho-acceptor) domain OM952_05460 PF00989 PAS fold OM952_05460 PF11808 Phosphate regulon sensor protein PhoR OM952_05465 PF00072 Response regulator receiver domain OM952_05465 PF00486 Transcriptional regulatory protein, C terminal OM952_05470 PF01435 Peptidase family M48 OM952_05470 PF13181 Tetratricopeptide repeat OM952_05475 PF00462 Glutaredoxin OM952_05485 PF00180 Isocitrate/isopropylmalate dehydrogenase OM952_05485 PF18324 Hypothetical protein TT1725 OM952_05525 PF00872 Transposase, Mutator family OM952_05540 PF05697 Bacterial trigger factor protein (TF) OM952_05540 PF05698 Bacterial trigger factor protein (TF) C-terminus OM952_05545 PF00574 Clp protease OM952_05550 PF07724 AAA domain (Cdc48 subfamily) OM952_05550 PF10431 C-terminal, D2-small domain, of ClpB protein OM952_05550 PF06689 ClpX C4-type zinc finger OM952_05555 PF00004 ATPase family associated with various cellular activities (AAA) OM952_05555 PF05362 Lon protease (S16) C-terminal proteolytic domain OM952_05555 PF02190 ATP-dependent protease La (LON) substrate-binding domain OM952_05560 PF00216 Bacterial DNA-binding protein OM952_05585 PF05257 CHAP domain OM952_05585 PF01476 LysM domain OM952_05590 PF16123 Hydroxyacylglutathione hydrolase C-terminus OM952_05590 PF00753 Metallo-beta-lactamase superfamily OM952_05600 PF00075 RNase H OM952_05605 PF00929 Exonuclease OM952_05630 PF01075 Glycosyltransferase family 9 (heptosyltransferase) OM952_05640 PF00753 Metallo-beta-lactamase superfamily OM952_05640 PF12706 Beta-lactamase superfamily domain OM952_05645 PF06463 Molybdenum Cofactor Synthesis C OM952_05645 PF04055 Radical SAM superfamily OM952_05655 PF01967 MoaC family OM952_05660 PF02597 ThiS family OM952_05665 PF02391 MoaE protein OM952_05680 PF12170 DNA polymerase III tau subunit V interacting with alpha OM952_05680 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding OM952_05680 PF12169 DNA polymerase III subunits gamma and tau domain III OM952_05685 PF02575 YbaB/EbfC DNA-binding family OM952_05690 PF02132 RecR protein OM952_05690 PF13662 Toprim domain OM952_05695 PF01230 HIT domain OM952_05705 PF01841 Transglutaminase-like superfamily OM952_05705 PF13559 Domain of unknown function (DUF4129) OM952_05705 PF11992 Domain of unknown function (DUF3488) OM952_05715 PF17863 AAA lid domain OM952_05715 PF07726 ATPase family associated with various cellular activities (AAA) OM952_05725 PF02545 Maf-like protein OM952_05730 PF02620 Large ribosomal RNA subunit accumulation protein YceD OM952_05735 PF01783 Ribosomal L32p protein family OM952_05740 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III OM952_05740 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal OM952_05750 PF00698 Acyl transferase domain OM952_05760 PF00550 Phosphopantetheine attachment site OM952_05765 PF02801 Beta-ketoacyl synthase, C-terminal domain OM952_05765 PF00109 Beta-ketoacyl synthase, N-terminal domain OM952_05770 PF04715 Anthranilate synthase component I, N terminal region OM952_05770 PF00425 chorismate binding enzyme OM952_05775 PF02618 YceG-like family OM952_05780 PF09115 DNA polymerase III, delta subunit, C terminal OM952_05805 PF02954 Bacterial regulatory protein, Fis family OM952_05805 PF06506 Propionate catabolism activator OM952_05805 PF00158 Sigma-54 interaction domain OM952_05815 PF00285 Citrate synthase, C-terminal domain OM952_05820 PF00694 Aconitase C-terminal domain OM952_05820 PF00330 Aconitase family (aconitate hydratase) OM952_05830 PF04303 PrpF protein OM952_05835 PF07715 TonB-dependent Receptor Plug Domain OM952_05835 PF00593 TonB dependent receptor OM952_05850 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain OM952_05850 PF01835 MG2 domain OM952_05850 PF17962 Bacterial macroglobulin domain 6 OM952_05850 PF11974 Bacterial alpha-2-macroglobulin MG3 domain OM952_05850 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain OM952_05850 PF07703 Alpha-2-macroglobulin bait region domain OM952_05850 PF00207 Alpha-2-macroglobulin family OM952_05850 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain OM952_05870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM952_05870 PF00512 His Kinase A (phospho-acceptor) domain OM952_05870 PF00989 PAS fold OM952_05875 PF00912 Transglycosylase OM952_05875 PF06832 Penicillin-Binding Protein C-terminus Family OM952_05875 PF00905 Penicillin binding protein transpeptidase domain OM952_05885 PF08534 Redoxin OM952_05895 PF01556 DnaJ C terminal domain OM952_05895 PF00226 DnaJ domain OM952_05900 PF00072 Response regulator receiver domain OM952_05905 PF01145 SPFH domain / Band 7 family OM952_05905 PF12221 Bacterial membrane protein N terminal OM952_05910 PF01145 SPFH domain / Band 7 family OM952_05920 PF00709 Adenylosuccinate synthetase OM952_05925 PF01433 Peptidase family M1 domain OM952_05925 PF11838 ERAP1-like C-terminal domain OM952_05940 PF00440 Bacterial regulatory proteins, tetR family OM952_05960 PF00872 Transposase, Mutator family OM952_05990 PF01256 Carbohydrate kinase OM952_06000 PF00723 Glycosyl hydrolases family 15 OM952_06010 PF17678 Glycosyl hydrolase family 92 N-terminal domain OM952_06010 PF07971 Glycosyl hydrolase family 92 OM952_06035 PF07992 Pyridine nucleotide-disulphide oxidoreductase OM952_06055 PF17755 UvrA DNA-binding domain OM952_06065 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain OM952_06065 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase OM952_06070 PF00941 FAD binding domain in molybdopterin dehydrogenase OM952_06070 PF03450 CO dehydrogenase flavoprotein C-terminal domain OM952_06075 PF01799 [2Fe-2S] binding domain OM952_06075 PF00111 2Fe-2S iron-sulfur cluster binding domain OM952_06110 PF00717 Peptidase S24-like OM952_06110 PF01726 LexA DNA binding domain OM952_06125 PF17657 Bacterial DNA polymerase III alpha subunit finger domain OM952_06125 PF02811 PHP domain OM952_06125 PF07733 Bacterial DNA polymerase III alpha NTPase domain OM952_06125 PF14579 Helix-hairpin-helix motif OM952_06135 PF00326 Prolyl oligopeptidase family OM952_06145 PF03169 OPT oligopeptide transporter protein OM952_06170 PF00326 Prolyl oligopeptidase family OM952_06170 PF07676 WD40-like Beta Propeller Repeat OM952_06170 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region OM952_06205 PF02311 AraC-like ligand binding domain OM952_06205 PF12833 Helix-turn-helix domain OM952_06215 PF00872 Transposase, Mutator family OM952_06225 PF06628 Catalase-related immune-responsive OM952_06225 PF18011 C-terminal domain found in long catalases OM952_06225 PF00199 Catalase OM952_06230 PF00248 Aldo/keto reductase family OM952_06235 PF00135 Carboxylesterase family OM952_06240 PF02347 Glycine cleavage system P-protein OM952_06260 PF00005 ABC transporter OM952_06260 PF00664 ABC transporter transmembrane region OM952_06260 PF03412 Peptidase C39 family OM952_06265 PF07690 Major Facilitator Superfamily OM952_06285 PF00872 Transposase, Mutator family OM952_06305 PF08019 Phosphoethanolamine transferase EptA/EptB OM952_06305 PF00884 Sulfatase OM952_06320 PF00072 Response regulator receiver domain OM952_06320 PF00486 Transcriptional regulatory protein, C terminal OM952_06325 PF08521 Two-component sensor kinase N-terminal OM952_06325 PF00512 His Kinase A (phospho-acceptor) domain OM952_06325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM952_06335 PF03776 Septum formation topological specificity factor MinE OM952_06340 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain OM952_06345 PF03775 Septum formation inhibitor MinC, C-terminal domain OM952_06345 PF05209 Septum formation inhibitor MinC, N-terminal domain OM952_06355 PF07730 Histidine kinase OM952_06360 PF00196 Bacterial regulatory proteins, luxR family OM952_06360 PF00072 Response regulator receiver domain OM952_06375 PF00730 HhH-GPD superfamily base excision DNA repair protein OM952_06400 PF02222 ATP-grasp domain OM952_06410 PF04377 Arginine-tRNA-protein transferase, C terminus OM952_06410 PF04376 Arginine-tRNA-protein transferase, N terminus OM952_06425 PF08281 Sigma-70, region 4 OM952_06425 PF04542 Sigma-70 region 2 OM952_06440 PF00378 Enoyl-CoA hydratase/isomerase OM952_06455 PF17760 UvrA interaction domain OM952_06455 PF00005 ABC transporter OM952_06455 PF17755 UvrA DNA-binding domain OM952_06460 PF00829 Ribosomal prokaryotic L21 protein OM952_06465 PF01016 Ribosomal L27 protein OM952_06470 PF01018 GTP1/OBG OM952_06470 PF01926 50S ribosome-binding GTPase OM952_06475 PF01649 Ribosomal protein S20 OM952_06480 PF03023 Lipid II flippase MurJ OM952_06485 PF06574 FAD synthetase OM952_06485 PF01687 Riboflavin kinase OM952_06490 PF00133 tRNA synthetases class I (I, L, M and V) OM952_06490 PF06827 Zinc finger found in FPG and IleRS OM952_06490 PF08264 Anticodon-binding domain of tRNA OM952_06495 PF01252 Signal peptidase (SPase) II OM952_06500 PF02401 LytB protein OM952_06510 PF00116 Cytochrome C oxidase subunit II, periplasmic domain OM952_06510 PF06481 COX Aromatic Rich Motif OM952_06515 PF00115 Cytochrome C and Quinol oxidase polypeptide I OM952_06520 PF00510 Cytochrome c oxidase subunit III OM952_06525 PF03626 Prokaryotic Cytochrome C oxidase subunit IV OM952_06535 PF18073 Rubredoxin metal binding domain OM952_06540 PF05656 Protein of unknown function (DUF805) OM952_06550 PF12833 Helix-turn-helix domain OM952_06555 PF00183 Hsp90 protein OM952_06555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM952_06565 PF08678 Rsbr N terminal OM952_06565 PF01740 STAS domain OM952_06570 PF01740 STAS domain OM952_06585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM952_06585 PF00072 Response regulator receiver domain OM952_06585 PF00512 His Kinase A (phospho-acceptor) domain OM952_06585 PF01627 Hpt domain OM952_06585 PF00672 HAMP domain OM952_06585 PF17149 Periplasmic sensor domain found in signal transduction proteins OM952_06590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM952_06590 PF00512 His Kinase A (phospho-acceptor) domain OM952_06590 PF08448 PAS fold OM952_06590 PF13188 PAS domain OM952_06590 PF00072 Response regulator receiver domain OM952_06595 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain OM952_06595 PF04616 Glycosyl hydrolases family 43 OM952_06600 PF00593 TonB dependent receptor OM952_06600 PF07715 TonB-dependent Receptor Plug Domain OM952_06605 PF00085 Thioredoxin OM952_06610 PF07237 Protein of unknown function (DUF1428) OM952_06615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM952_06615 PF00512 His Kinase A (phospho-acceptor) domain OM952_06615 PF02702 Osmosensitive K+ channel His kinase sensor domain OM952_06615 PF13492 GAF domain OM952_06615 PF13493 Domain of unknown function (DUF4118) OM952_06620 PF01339 CheB methylesterase OM952_06625 PF03705 CheR methyltransferase, all-alpha domain OM952_06625 PF01739 CheR methyltransferase, SAM binding domain OM952_06630 PF00072 Response regulator receiver domain OM952_06630 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) OM952_06630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM952_06630 PF00672 HAMP domain OM952_06630 PF00512 His Kinase A (phospho-acceptor) domain OM952_06630 PF01627 Hpt domain OM952_06635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM952_06635 PF00072 Response regulator receiver domain OM952_06635 PF13426 PAS domain OM952_06640 PF00072 Response regulator receiver domain OM952_06645 PF06964 Alpha-L-arabinofuranosidase C-terminal domain OM952_06650 PF01263 Aldose 1-epimerase OM952_06655 PF01578 Cytochrome C assembly protein OM952_06660 PF02881 SRP54-type protein, helical bundle domain OM952_06660 PF02978 Signal peptide binding domain OM952_06660 PF00448 SRP54-type protein, GTPase domain OM952_06665 PF03060 Nitronate monooxygenase OM952_06670 PF01063 Amino-transferase class IV OM952_06675 PF00886 Ribosomal protein S16 OM952_06680 PF05239 PRC-barrel domain OM952_06680 PF01782 RimM N-terminal domain OM952_06685 PF01746 tRNA (Guanine-1)-methyltransferase OM952_06690 PF01245 Ribosomal protein L19 OM952_06695 PF01554 MatE OM952_06715 PF01479 S4 domain OM952_06720 PF00141 Peroxidase OM952_06730 PF01624 MutS domain I OM952_06730 PF05188 MutS domain II OM952_06730 PF05192 MutS domain III OM952_06730 PF05190 MutS family domain IV OM952_06730 PF00488 MutS domain V OM952_06735 PF13276 HTH-like domain OM952_06735 PF00665 Integrase core domain OM952_06735 PF13333 Integrase core domain OM952_06785 PF02836 Glycosyl hydrolases family 2, TIM barrel domain OM952_06785 PF00703 Glycosyl hydrolases family 2 OM952_06785 PF02837 Glycosyl hydrolases family 2, sugar binding domain OM952_06785 PF16355 Domain of unknown function (DUF4982) OM952_06785 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 OM952_06790 PF07745 Glycosyl hydrolase family 53 OM952_06800 PF09856 Predicted transcriptional regulator (DUF2083) OM952_06800 PF06114 IrrE N-terminal-like domain OM952_06800 PF01381 Helix-turn-helix OM952_06805 PF00171 Aldehyde dehydrogenase family OM952_06810 PF02770 Acyl-CoA dehydrogenase, middle domain OM952_06810 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OM952_06810 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OM952_06815 PF00378 Enoyl-CoA hydratase/isomerase OM952_06820 PF00378 Enoyl-CoA hydratase/isomerase OM952_06820 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain OM952_06820 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain OM952_06825 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase OM952_06825 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase OM952_06830 PF01545 Cation efflux family OM952_06840 PF13181 Tetratricopeptide repeat OM952_06850 PF13181 Tetratricopeptide repeat OM952_06855 PF07715 TonB-dependent Receptor Plug Domain OM952_06855 PF00593 TonB dependent receptor OM952_06860 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain OM952_06860 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain OM952_06860 PF00378 Enoyl-CoA hydratase/isomerase OM952_06865 PF04542 Sigma-70 region 2 OM952_06865 PF08281 Sigma-70, region 4 OM952_06875 PF13180 PDZ domain OM952_06880 PF03144 Elongation factor Tu domain 2 OM952_06880 PF00679 Elongation factor G C-terminus OM952_06880 PF06421 GTP-binding protein LepA C-terminus OM952_06880 PF00009 Elongation factor Tu GTP binding domain OM952_06885 PF10502 Signal peptidase, peptidase S26 OM952_06895 PF00035 Double-stranded RNA binding motif OM952_06895 PF14622 Ribonuclease-III-like OM952_06900 PF07650 KH domain OM952_06900 PF01926 50S ribosome-binding GTPase OM952_06905 PF11967 Recombination protein O N terminal OM952_06905 PF02565 Recombination protein O C terminal OM952_06915 PF05958 tRNA (Uracil-5-)-methyltransferase OM952_06920 PF01928 CYTH domain OM952_06925 PF01323 DSBA-like thioredoxin domain OM952_06930 PF01593 Flavin containing amine oxidoreductase OM952_06935 PF04244 Deoxyribodipyrimidine photo-lyase-related protein OM952_06940 PF00933 Glycosyl hydrolase family 3 N terminal domain OM952_06945 PF00156 Phosphoribosyl transferase domain OM952_06950 PF01048 Phosphorylase superfamily OM952_06955 PF00313 'Cold-shock' DNA-binding domain OM952_06960 PF01494 FAD binding domain OM952_06970 PF08494 DEAD/H associated OM952_06970 PF00270 DEAD/DEAH box helicase OM952_06970 PF00271 Helicase conserved C-terminal domain OM952_06975 PF04679 ATP dependent DNA ligase C terminal region OM952_06975 PF01068 ATP dependent DNA ligase domain OM952_06975 PF04675 DNA ligase N terminus OM952_06985 PF04675 DNA ligase N terminus OM952_06985 PF01068 ATP dependent DNA ligase domain OM952_06985 PF04679 ATP dependent DNA ligase C terminal region OM952_07005 PF00990 Diguanylate cyclase, GGDEF domain OM952_07005 PF00072 Response regulator receiver domain OM952_07020 PF02803 Thiolase, C-terminal domain OM952_07020 PF00108 Thiolase, N-terminal domain OM952_07025 PF03797 Autotransporter beta-domain OM952_07025 PF12951 Passenger-associated-transport-repeat OM952_07025 PF00082 Subtilase family OM952_07030 PF12951 Passenger-associated-transport-repeat OM952_07030 PF03797 Autotransporter beta-domain OM952_07030 PF00082 Subtilase family OM952_07035 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase OM952_07035 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain OM952_07045 PF01863 Protein of unknown function DUF45 OM952_07050 PF07043 Protein of unknown function (DUF1328) OM952_07060 PF01258 Prokaryotic dksA/traR C4-type zinc finger OM952_07080 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase OM952_07090 PF03831 PhnA domain OM952_07090 PF08274 PhnA Zinc-Ribbon OM952_07100 PF00724 NADH:flavin oxidoreductase / NADH oxidase family OM952_07105 PF07690 Major Facilitator Superfamily OM952_07140 PF09924 Uncharacterised conserved protein (DUF2156) OM952_07140 PF03706 Lysylphosphatidylglycerol synthase TM region OM952_07150 PF01042 Endoribonuclease L-PSP OM952_07195 PF04542 Sigma-70 region 2 OM952_07195 PF04545 Sigma-70, region 4 OM952_07210 PF04060 Putative Fe-S cluster OM952_07220 PF09334 tRNA synthetases class I (M) OM952_07220 PF01588 Putative tRNA binding domain OM952_07240 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily OM952_07255 PF00324 Amino acid permease OM952_07260 PF02574 Homocysteine S-methyltransferase OM952_07270 PF02592 Putative vitamin uptake transporter OM952_07290 PF03551 Transcriptional regulator PadR-like family OM952_07310 PF03653 Uncharacterised protein family (UPF0093) OM952_07325 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit OM952_07330 PF07733 Bacterial DNA polymerase III alpha NTPase domain OM952_07330 PF17657 Bacterial DNA polymerase III alpha subunit finger domain OM952_07330 PF14579 Helix-hairpin-helix motif OM952_07330 PF02811 PHP domain OM952_07330 PF01336 OB-fold nucleic acid binding domain OM952_07335 PF01351 Ribonuclease HII OM952_07340 PF02684 Lipid-A-disaccharide synthetase OM952_07345 PF00132 Bacterial transferase hexapeptide (six repeats) OM952_07345 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 OM952_07350 PF07977 FabA-like domain OM952_07355 PF00132 Bacterial transferase hexapeptide (six repeats) OM952_07355 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD OM952_07365 PF01103 Surface antigen OM952_07365 PF07244 Surface antigen variable number repeat OM952_07370 PF17820 PDZ domain OM952_07370 PF02163 Peptidase family M50 OM952_07375 PF13288 DXP reductoisomerase C-terminal domain OM952_07375 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain OM952_07375 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase OM952_07385 PF01255 Putative undecaprenyl diphosphate synthase OM952_07390 PF01765 Ribosome recycling factor OM952_07395 PF00696 Amino acid kinase family OM952_07400 PF00072 Response regulator receiver domain OM952_07400 PF00990 Diguanylate cyclase, GGDEF domain OM952_07405 PF00889 Elongation factor TS OM952_07410 PF00318 Ribosomal protein S2 OM952_07445 PF00557 Metallopeptidase family M24 OM952_07455 PF00132 Bacterial transferase hexapeptide (six repeats) OM952_07455 PF14602 Hexapeptide repeat of succinyl-transferase OM952_07455 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal OM952_07460 PF03960 ArsC family OM952_07465 PF07687 Peptidase dimerisation domain OM952_07465 PF01546 Peptidase family M20/M25/M40 OM952_07475 PF13537 Glutamine amidotransferase domain OM952_07475 PF00733 Asparagine synthase OM952_07485 PF07715 TonB-dependent Receptor Plug Domain OM952_07485 PF00593 TonB dependent receptor OM952_07490 PF01804 Penicillin amidase OM952_07495 PF00210 Ferritin-like domain OM952_07515 PF03989 DNA gyrase C-terminal domain, beta-propeller OM952_07515 PF00521 DNA gyrase/topoisomerase IV, subunit A OM952_07540 PF00665 Integrase core domain OM952_07540 PF13333 Integrase core domain OM952_07540 PF13276 HTH-like domain OM952_07545 PF00872 Transposase, Mutator family OM952_07575 PF02321 Outer membrane efflux protein OM952_07580 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OM952_07580 PF00529 HlyD membrane-fusion protein of T1SS OM952_07585 PF07690 Major Facilitator Superfamily OM952_07605 PF00933 Glycosyl hydrolase family 3 N terminal domain OM952_07605 PF01915 Glycosyl hydrolase family 3 C-terminal domain OM952_07605 PF14310 Fibronectin type III-like domain OM952_07615 PF00854 POT family OM952_07640 PF12802 MarR family OM952_07645 PF01432 Peptidase family M3 OM952_07650 PF00255 Glutathione peroxidase OM952_07655 PF00970 Oxidoreductase FAD-binding domain OM952_07655 PF00175 Oxidoreductase NAD-binding domain OM952_07660 PF00005 ABC transporter OM952_07665 PF05681 Fumarate hydratase (Fumerase) OM952_07665 PF05683 Fumarase C-terminus OM952_07680 PF00484 Carbonic anhydrase OM952_07685 PF02253 Phospholipase A1 OM952_07695 PF00313 'Cold-shock' DNA-binding domain OM952_07710 PF00899 ThiF family OM952_07715 PF01026 TatD related DNase OM952_07730 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OM952_07730 PF02770 Acyl-CoA dehydrogenase, middle domain OM952_07730 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OM952_07740 PF13417 Glutathione S-transferase, N-terminal domain OM952_07745 PF00733 Asparagine synthase OM952_07745 PF13537 Glutamine amidotransferase domain OM952_07750 PF03358 NADPH-dependent FMN reductase OM952_07755 PF00772 DnaB-like helicase N terminal domain OM952_07755 PF03796 DnaB-like helicase C terminal domain OM952_07760 PF03441 FAD binding domain of DNA photolyase OM952_07760 PF00875 DNA photolyase OM952_07765 PF05736 OprF membrane domain OM952_07765 PF00691 OmpA family OM952_07775 PF03466 LysR substrate binding domain OM952_07775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM952_07790 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OM952_07790 PF00529 HlyD membrane-fusion protein of T1SS OM952_07795 PF00873 AcrB/AcrD/AcrF family OM952_07800 PF00106 short chain dehydrogenase OM952_07805 PF02321 Outer membrane efflux protein OM952_07810 PF00990 Diguanylate cyclase, GGDEF domain OM952_07820 PF00990 Diguanylate cyclase, GGDEF domain OM952_07845 PF01668 SmpB protein OM952_07850 PF03364 Polyketide cyclase / dehydrase and lipid transport OM952_07855 PF03658 RnfH family Ubiquitin OM952_07860 PF04355 SmpA / OmlA family OM952_07865 PF01475 Ferric uptake regulator family OM952_07870 PF02463 RecF/RecN/SMC N terminal domain OM952_07875 PF01628 HrcA protein C terminal domain OM952_07875 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding OM952_07880 PF01025 GrpE OM952_07885 PF00012 Hsp70 protein OM952_07890 PF00226 DnaJ domain OM952_07890 PF01556 DnaJ C terminal domain OM952_07890 PF00684 DnaJ central domain OM952_07895 PF08543 Phosphomethylpyrimidine kinase OM952_07920 PF03412 Peptidase C39 family OM952_07920 PF00005 ABC transporter OM952_07920 PF00664 ABC transporter transmembrane region OM952_07925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM952_07925 PF03466 LysR substrate binding domain OM952_07930 PF00005 ABC transporter OM952_07930 PF00664 ABC transporter transmembrane region OM952_07935 PF01205 Uncharacterized protein family UPF0029 OM952_07940 PF03641 Possible lysine decarboxylase OM952_07945 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain OM952_07945 PF07992 Pyridine nucleotide-disulphide oxidoreductase OM952_07950 PF00364 Biotin-requiring enzyme OM952_07950 PF02817 e3 binding domain OM952_07950 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) OM952_07955 PF16078 2-oxoglutarate dehydrogenase N-terminus OM952_07955 PF00676 Dehydrogenase E1 component OM952_07955 PF16870 2-oxoglutarate dehydrogenase C-terminal OM952_07955 PF02779 Transketolase, pyrimidine binding domain OM952_07965 PF08007 Cupin superfamily protein OM952_07975 PF00206 Lyase OM952_07975 PF08328 Adenylosuccinate lyase C-terminal OM952_07985 PF00571 CBS domain OM952_07985 PF03471 Transporter associated domain OM952_07985 PF01595 Cyclin M transmembrane N-terminal domain OM952_07990 PF10415 Fumarase C C-terminus OM952_07990 PF00206 Lyase OM952_08015 PF00005 ABC transporter OM952_08020 PF00392 Bacterial regulatory proteins, gntR family OM952_08030 PF00255 Glutathione peroxidase OM952_08035 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase OM952_08035 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase OM952_08045 PF04102 SlyX OM952_08065 PF00356 Bacterial regulatory proteins, lacI family OM952_08070 PF07690 Major Facilitator Superfamily OM952_08075 PF00294 pfkB family carbohydrate kinase OM952_08085 PF00809 Pterin binding enzyme OM952_08085 PF02965 Vitamin B12 dependent methionine synthase, activation domain OM952_08085 PF02607 B12 binding domain OM952_08085 PF02310 B12 binding domain OM952_08085 PF02574 Homocysteine S-methyltransferase OM952_08090 PF02574 Homocysteine S-methyltransferase OM952_08090 PF00809 Pterin binding enzyme OM952_08095 PF01209 ubiE/COQ5 methyltransferase family OM952_08100 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OM952_08100 PF02770 Acyl-CoA dehydrogenase, middle domain OM952_08100 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OM952_08120 PF08206 Ribonuclease B OB domain OM952_08120 PF00773 RNB domain OM952_08120 PF08461 Ribonuclease R winged-helix domain OM952_08120 PF17876 Cold shock domain OM952_08120 PF00575 S1 RNA binding domain OM952_08130 PF00588 SpoU rRNA Methylase family OM952_08130 PF08032 RNA 2'-O ribose methyltransferase substrate binding OM952_08140 PF00929 Exonuclease OM952_08150 PF01895 PhoU domain OM952_08155 PF00005 ABC transporter OM952_08160 PF00528 Binding-protein-dependent transport system inner membrane component OM952_08165 PF00528 Binding-protein-dependent transport system inner membrane component OM952_08170 PF12849 PBP superfamily domain OM952_08175 PF12849 PBP superfamily domain OM952_08190 PF00484 Carbonic anhydrase OM952_08195 PF01740 STAS domain OM952_08195 PF00916 Sulfate permease family OM952_08200 PF10576 Iron-sulfur binding domain of endonuclease III OM952_08200 PF00633 Helix-hairpin-helix motif OM952_08200 PF00730 HhH-GPD superfamily base excision DNA repair protein OM952_08210 PF00378 Enoyl-CoA hydratase/isomerase OM952_08215 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase OM952_08215 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase OM952_08220 PF00293 NUDIX domain OM952_08225 PF00581 Rhodanese-like domain OM952_08255 PF00005 ABC transporter OM952_08255 PF16326 ABC transporter C-terminal domain OM952_08255 PF12848 ABC transporter OM952_08265 PF01170 Putative RNA methylase family UPF0020 OM952_08265 PF10672 S-adenosylmethionine-dependent methyltransferase OM952_08265 PF02926 THUMP domain OM952_08270 PF01513 ATP-NAD kinase OM952_08290 PF08411 Exonuclease C-terminal OM952_08290 PF00929 Exonuclease OM952_08300 PF01494 FAD binding domain OM952_08305 PF00266 Aminotransferase class-V OM952_08315 PF06052 3-hydroxyanthranilic acid dioxygenase OM952_08320 PF00484 Carbonic anhydrase OM952_08365 PF00072 Response regulator receiver domain OM952_08365 PF00196 Bacterial regulatory proteins, luxR family OM952_08400 PF00152 tRNA synthetases class II (D, K and N) OM952_08400 PF01336 OB-fold nucleic acid binding domain OM952_08405 PF01521 Iron-sulphur cluster biosynthesis OM952_08410 PF01250 Ribosomal protein S6 OM952_08415 PF01084 Ribosomal protein S18 OM952_08420 PF03948 Ribosomal protein L9, C-terminal domain OM952_08420 PF01281 Ribosomal protein L9, N-terminal domain OM952_08425 PF02463 RecF/RecN/SMC N terminal domain OM952_08430 PF04354 ZipA, C-terminal FtsZ-binding domain OM952_08440 PF00155 Aminotransferase class I and II OM952_08445 PF00533 BRCA1 C Terminus (BRCT) domain OM952_08445 PF01653 NAD-dependent DNA ligase adenylation domain OM952_08445 PF03120 NAD-dependent DNA ligase OB-fold domain OM952_08445 PF03119 NAD-dependent DNA ligase C4 zinc finger domain OM952_08445 PF12826 Helix-hairpin-helix motif OM952_08450 PF00152 tRNA synthetases class II (D, K and N) OM952_08460 PF01008 Initiation factor 2 subunit family OM952_08465 PF03989 DNA gyrase C-terminal domain, beta-propeller OM952_08465 PF00521 DNA gyrase/topoisomerase IV, subunit A OM952_08470 PF13360 PQQ-like domain OM952_08480 PF17391 Urocanase N-terminal domain OM952_08480 PF01175 Urocanase Rossmann-like domain OM952_08480 PF17392 Urocanase C-terminal domain OM952_08490 PF00221 Aromatic amino acid lyase OM952_08495 PF07969 Amidohydrolase family OM952_08510 PF07702 UTRA domain OM952_08510 PF00392 Bacterial regulatory proteins, gntR family OM952_08535 PF01794 Ferric reductase like transmembrane component OM952_08540 PF00174 Oxidoreductase molybdopterin binding domain OM952_08545 PF00266 Aminotransferase class-V OM952_08550 PF01842 ACT domain OM952_08550 PF01817 Chorismate mutase type II OM952_08550 PF00800 Prephenate dehydratase OM952_08555 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) OM952_08565 PF03544 Gram-negative bacterial TonB protein C-terminal OM952_08570 PF02403 Seryl-tRNA synthetase N-terminal domain OM952_08570 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) OM952_08575 PF02525 Flavodoxin-like fold OM952_08580 PF03466 LysR substrate binding domain OM952_08580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM952_08605 PF00672 HAMP domain OM952_08605 PF02203 Tar ligand binding domain homologue OM952_08605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM952_08610 PF01494 FAD binding domain OM952_08625 PF00072 Response regulator receiver domain OM952_08625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM952_08625 PF13426 PAS domain OM952_08630 PF06745 KaiC OM952_08635 PF13188 PAS domain OM952_08635 PF00512 His Kinase A (phospho-acceptor) domain OM952_08635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM952_08635 PF00072 Response regulator receiver domain OM952_08635 PF08448 PAS fold OM952_08645 PF03918 Cytochrome C biogenesis protein OM952_08650 PF08534 Redoxin OM952_08655 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal OM952_08655 PF01578 Cytochrome C assembly protein OM952_08660 PF03100 CcmE OM952_08665 PF04995 Heme exporter protein D (CcmD) OM952_08670 PF01578 Cytochrome C assembly protein OM952_08675 PF00082 Subtilase family OM952_08685 PF08281 Sigma-70, region 4 OM952_08685 PF04542 Sigma-70 region 2 OM952_08695 PF00034 Cytochrome c OM952_08710 PF05523 WxcM-like, C-terminal OM952_08730 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family OM952_08735 PF01943 Polysaccharide biosynthesis protein OM952_08740 PF00535 Glycosyl transferase family 2 OM952_08755 PF08241 Methyltransferase domain OM952_08790 PF00005 ABC transporter OM952_08795 PF00005 ABC transporter OM952_08795 PF00664 ABC transporter transmembrane region OM952_08800 PF07690 Major Facilitator Superfamily OM952_08805 PF00296 Luciferase-like monooxygenase OM952_08820 PF00571 CBS domain OM952_08820 PF03471 Transporter associated domain OM952_08820 PF01595 Cyclin M transmembrane N-terminal domain OM952_08830 PF01384 Phosphate transporter family OM952_08845 PF00204 DNA gyrase B OM952_08845 PF00986 DNA gyrase B subunit, carboxyl terminus OM952_08845 PF01751 Toprim domain OM952_08845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM952_08855 PF00117 Glutamine amidotransferase class-I OM952_08855 PF06418 CTP synthase N-terminus OM952_08860 PF00793 DAHP synthetase I family OM952_08870 PF00113 Enolase, C-terminal TIM barrel domain OM952_08870 PF03952 Enolase, N-terminal domain OM952_08875 PF04977 Septum formation initiator OM952_08880 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OM952_08885 PF02542 YgbB family OM952_08890 PF01142 tRNA pseudouridine synthase D (TruD) OM952_08895 PF01713 Smr domain OM952_08900 PF01975 Survival protein SurE OM952_08910 PF09335 SNARE associated Golgi protein OM952_08915 PF01476 LysM domain OM952_08915 PF01551 Peptidase family M23 OM952_08920 PF04430 Protein of unknown function (DUF498/DUF598) OM952_08925 PF01985 CRS1 / YhbY (CRM) domain OM952_08930 PF01728 FtsJ-like methyltransferase OM952_08935 PF17862 AAA+ lid domain OM952_08935 PF00004 ATPase family associated with various cellular activities (AAA) OM952_08935 PF06480 FtsH Extracellular OM952_08935 PF01434 Peptidase family M41 OM952_08940 PF00809 Pterin binding enzyme OM952_08950 PF17209 Hfq protein OM952_08955 PF16360 GTP-binding GTPase Middle Region OM952_08955 PF13167 GTP-binding GTPase N-terminal OM952_08955 PF01926 50S ribosome-binding GTPase OM952_08960 PF02464 Competence-damaged protein OM952_08965 PF03109 ABC1 family OM952_08970 PF01726 LexA DNA binding domain OM952_08970 PF00717 Peptidase S24-like OM952_08975 PF00154 recA bacterial DNA recombination protein OM952_08980 PF02631 RecX family OM952_08985 PF02272 DHHA1 domain OM952_08985 PF01411 tRNA synthetases class II (A) OM952_08985 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain OM952_08990 PF02599 Global regulator protein family OM952_09000 PF08447 PAS fold OM952_09000 PF13426 PAS domain OM952_09000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM952_09010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM952_09010 PF03466 LysR substrate binding domain OM952_09035 PF08543 Phosphomethylpyrimidine kinase OM952_09050 PF02562 PhoH-like protein OM952_09050 PF13638 PIN domain OM952_09055 PF00578 AhpC/TSA family OM952_09070 PF00701 Dihydrodipicolinate synthetase family OM952_09080 PF11953 Domain of unknown function (DUF3470) OM952_09080 PF00037 4Fe-4S binding domain OM952_09085 PF05035 2-keto-3-deoxy-galactonokinase OM952_09090 PF08450 SMP-30/Gluconolactonase/LRE-like region OM952_09095 PF13378 Enolase C-terminal domain-like OM952_09095 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain OM952_09100 PF01081 KDPG and KHG aldolase OM952_09105 PF03466 LysR substrate binding domain OM952_09105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM952_09120 PF03442 Carbohydrate binding domain X2 OM952_09120 PF00942 Cellulose binding domain OM952_09135 PF01055 Glycosyl hydrolases family 31 OM952_09135 PF17137 Domain of unknown function (DUF5110) OM952_09135 PF16338 Domain of unknown function (DUF4968) OM952_09145 PF00370 FGGY family of carbohydrate kinases, N-terminal domain OM952_09145 PF02782 FGGY family of carbohydrate kinases, C-terminal domain OM952_09155 PF00083 Sugar (and other) transporter OM952_09170 PF01520 N-acetylmuramoyl-L-alanine amidase OM952_09175 PF02649 Type I GTP cyclohydrolase folE2 OM952_09190 PF12627 Probable RNA and SrmB- binding site of polymerase A OM952_09190 PF01743 Poly A polymerase head domain OM952_09190 PF12626 Polymerase A arginine-rich C-terminus OM952_09195 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) OM952_09200 PF02548 Ketopantoate hydroxymethyltransferase OM952_09205 PF02569 Pantoate-beta-alanine ligase OM952_09210 PF02261 Aspartate decarboxylase OM952_09215 PF00342 Phosphoglucose isomerase OM952_09235 PF14310 Fibronectin type III-like domain OM952_09235 PF00933 Glycosyl hydrolase family 3 N terminal domain OM952_09235 PF01915 Glycosyl hydrolase family 3 C-terminal domain OM952_09240 PF00474 Sodium:solute symporter family OM952_09245 PF00563 EAL domain OM952_09245 PF01590 GAF domain OM952_09245 PF00990 Diguanylate cyclase, GGDEF domain OM952_09245 PF00360 Phytochrome region OM952_09250 PF00150 Cellulase (glycosyl hydrolase family 5) OM952_09250 PF02013 Cellulose or protein binding domain OM952_09255 PF00072 Response regulator receiver domain OM952_09265 PF04551 GcpE protein OM952_09270 PF01569 PAP2 superfamily OM952_09275 PF00083 Sugar (and other) transporter OM952_09275 PF08946 Osmosensory transporter coiled coil OM952_09280 PF01177 Asp/Glu/Hydantoin racemase OM952_09285 PF00892 EamA-like transporter family OM952_09290 PF01565 FAD binding domain OM952_09290 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain OM952_09295 PF01180 Dihydroorotate dehydrogenase OM952_09310 PF00171 Aldehyde dehydrogenase family OM952_09325 PF00872 Transposase, Mutator family OM952_09330 PF00128 Alpha amylase, catalytic domain OM952_09350 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation OM952_09350 PF14508 Glycosyl-hydrolase 97 N-terminal OM952_09350 PF10566 Glycoside hydrolase 97 OM952_09365 PF00128 Alpha amylase, catalytic domain OM952_09365 PF00686 Starch binding domain OM952_09370 PF00356 Bacterial regulatory proteins, lacI family OM952_09375 PF02824 TGS domain OM952_09375 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain OM952_09375 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) OM952_09375 PF03129 Anticodon binding domain OM952_09380 PF05198 Translation initiation factor IF-3, N-terminal domain OM952_09380 PF00707 Translation initiation factor IF-3, C-terminal domain OM952_09385 PF01632 Ribosomal protein L35 OM952_09390 PF00453 Ribosomal protein L20 OM952_09395 PF01409 tRNA synthetases class II core domain (F) OM952_09395 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain OM952_09400 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain OM952_09400 PF01588 Putative tRNA binding domain OM952_09400 PF03483 B3/4 domain OM952_09400 PF03484 tRNA synthetase B5 domain OM952_09400 PF03147 Ferredoxin-fold anticodon binding domain OM952_09405 PF00216 Bacterial DNA-binding protein OM952_09410 PF13411 MerR HTH family regulatory protein OM952_09430 PF02397 Bacterial sugar transferase OM952_09450 PF13439 Glycosyltransferase Family 4 OM952_09450 PF00534 Glycosyl transferases group 1 OM952_09460 PF14667 Polysaccharide biosynthesis C-terminal domain OM952_09475 PF03808 Glycosyl transferase WecB/TagA/CpsF family OM952_09490 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal OM952_09490 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III OM952_09520 PF02779 Transketolase, pyrimidine binding domain OM952_09520 PF13292 1-deoxy-D-xylulose-5-phosphate synthase OM952_09520 PF02780 Transketolase, C-terminal domain OM952_09530 PF12806 Acetyl-CoA dehydrogenase C-terminal like OM952_09530 PF02770 Acyl-CoA dehydrogenase, middle domain OM952_09530 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OM952_09530 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OM952_09540 PF08212 Lipocalin-like domain OM952_09570 PF13426 PAS domain OM952_09570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM952_09570 PF00072 Response regulator receiver domain OM952_09585 PF04362 Bacterial Fe(2+) trafficking OM952_09590 PF10576 Iron-sulfur binding domain of endonuclease III OM952_09590 PF00633 Helix-hairpin-helix motif OM952_09590 PF14815 NUDIX domain OM952_09590 PF00730 HhH-GPD superfamily base excision DNA repair protein OM952_09595 PF02881 SRP54-type protein, helical bundle domain OM952_09595 PF00448 SRP54-type protein, GTPase domain OM952_09605 PF05544 Proline racemase OM952_09610 PF01266 FAD dependent oxidoreductase OM952_09620 PF07992 Pyridine nucleotide-disulphide oxidoreductase OM952_09620 PF04324 BFD-like [2Fe-2S] binding domain OM952_09625 PF00701 Dihydrodipicolinate synthetase family OM952_09630 PF00171 Aldehyde dehydrogenase family OM952_09635 PF00557 Metallopeptidase family M24 OM952_09635 PF01321 Creatinase/Prolidase N-terminal domain OM952_09650 PF13520 Amino acid permease OM952_09680 PF09286 Pro-kumamolisin, activation domain OM952_09680 PF00082 Subtilase family OM952_09690 PF00593 TonB dependent receptor OM952_09690 PF07715 TonB-dependent Receptor Plug Domain OM952_09700 PF07532 Bacterial Ig-like domain (group 4) OM952_09710 PF00593 TonB dependent receptor OM952_09710 PF07715 TonB-dependent Receptor Plug Domain OM952_09745 PF00872 Transposase, Mutator family OM952_09755 PF00672 HAMP domain OM952_09755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM952_09755 PF02203 Tar ligand binding domain homologue OM952_09785 PF17287 POTRA domain OM952_09785 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB OM952_09785 PF08479 POTRA domain, ShlB-type OM952_09790 PF04829 Pre-toxin domain with VENN motif OM952_09790 PF13332 Hemagglutinin repeat OM952_09790 PF13332 Hemagglutinin repeat OM952_09790 PF05860 haemagglutination activity domain OM952_09790 PF15605 Bacterial toxin 28 OM952_09790 PF04829 Pre-toxin domain with VENN motif OM952_09790 PF05860 haemagglutination activity domain OM952_09790 PF15605 Bacterial toxin 28 OM952_09795 PF00872 Transposase, Mutator family OM952_09805 PF01609 Transposase DDE domain OM952_09805 PF05598 Transposase domain (DUF772) OM952_09825 PF03073 TspO/MBR family OM952_09830 PF00872 Transposase, Mutator family OM952_09835 PF01842 ACT domain OM952_09835 PF13840 ACT domain OM952_09835 PF03447 Homoserine dehydrogenase, NAD binding domain OM952_09835 PF00742 Homoserine dehydrogenase OM952_09835 PF00696 Amino acid kinase family OM952_09840 PF00288 GHMP kinases N terminal domain OM952_09840 PF08544 GHMP kinases C terminal OM952_09850 PF07519 Tannase and feruloyl esterase OM952_09860 PF00291 Pyridoxal-phosphate dependent enzyme OM952_09860 PF14821 Threonine synthase N terminus OM952_09870 PF00027 Cyclic nucleotide-binding domain OM952_09870 PF13545 Crp-like helix-turn-helix domain OM952_09875 PF03129 Anticodon binding domain OM952_09875 PF13393 Histidyl-tRNA synthetase OM952_09885 PF01634 ATP phosphoribosyltransferase OM952_09885 PF08029 HisG, C-terminal domain OM952_09890 PF00815 Histidinol dehydrogenase OM952_09895 PF00155 Aminotransferase class I and II OM952_09900 PF00475 Imidazoleglycerol-phosphate dehydratase OM952_09905 PF00117 Glutamine amidotransferase class-I OM952_09910 PF00977 Histidine biosynthesis protein OM952_09915 PF00977 Histidine biosynthesis protein OM952_09920 PF01502 Phosphoribosyl-AMP cyclohydrolase OM952_09920 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase OM952_09940 PF03079 ARD/ARD' family OM952_09945 PF00596 Class II Aldolase and Adducin N-terminal domain OM952_09950 PF13520 Amino acid permease OM952_09955 PF13520 Amino acid permease OM952_09965 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain OM952_09965 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain OM952_09970 PF02913 FAD linked oxidases, C-terminal domain OM952_09970 PF01565 FAD binding domain OM952_09990 PF08207 Elongation factor P (EF-P) KOW-like domain OM952_09990 PF01132 Elongation factor P (EF-P) OB domain OM952_09990 PF09285 Elongation factor P, C-terminal OM952_09995 PF00106 short chain dehydrogenase OM952_10000 PF00682 HMGL-like OM952_10010 PF00378 Enoyl-CoA hydratase/isomerase OM952_10020 PF07670 Nucleoside recognition OM952_10020 PF02421 Ferrous iron transport protein B OM952_10020 PF07664 Ferrous iron transport protein B C terminus OM952_10035 PF00155 Aminotransferase class I and II OM952_10040 PF03475 3-alpha domain OM952_10040 PF03473 MOSC domain OM952_10045 PF05173 Dihydrodipicolinate reductase, C-terminus OM952_10045 PF01113 Dihydrodipicolinate reductase, N-terminus OM952_10050 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain OM952_10050 PF00117 Glutamine amidotransferase class-I OM952_10060 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain OM952_10060 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain OM952_10060 PF02142 MGS-like domain OM952_10065 PF01272 Transcription elongation factor, GreA/GreB, C-term OM952_10065 PF03449 Transcription elongation factor, N-terminal OM952_10075 PF01368 DHH family OM952_10075 PF02272 DHHA1 domain OM952_10075 PF17768 RecJ OB domain OM952_10095 PF01336 OB-fold nucleic acid binding domain OM952_10095 PF00152 tRNA synthetases class II (D, K and N) OM952_10100 PF00072 Response regulator receiver domain OM952_10105 PF00512 His Kinase A (phospho-acceptor) domain OM952_10105 PF01627 Hpt domain OM952_10105 PF00072 Response regulator receiver domain OM952_10105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM952_10110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM952_10110 PF00512 His Kinase A (phospho-acceptor) domain OM952_10110 PF01627 Hpt domain OM952_10110 PF00072 Response regulator receiver domain OM952_10115 PF00378 Enoyl-CoA hydratase/isomerase OM952_10120 PF00501 AMP-binding enzyme OM952_10120 PF13193 AMP-binding enzyme C-terminal domain OM952_10135 PF00330 Aconitase family (aconitate hydratase) OM952_10135 PF00694 Aconitase C-terminal domain OM952_10150 PF00330 Aconitase family (aconitate hydratase) OM952_10150 PF06434 Aconitate hydratase 2 N-terminus OM952_10150 PF11791 Aconitate B N-terminal domain OM952_10155 PF00561 alpha/beta hydrolase fold OM952_10160 PF00563 EAL domain OM952_10160 PF00990 Diguanylate cyclase, GGDEF domain OM952_10160 PF03707 Bacterial signalling protein N terminal repeat OM952_10165 PF01339 CheB methylesterase OM952_10165 PF00072 Response regulator receiver domain OM952_10170 PF03975 CheD chemotactic sensory transduction OM952_10175 PF03705 CheR methyltransferase, all-alpha domain OM952_10175 PF01739 CheR methyltransferase, SAM binding domain OM952_10180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM952_10180 PF02203 Tar ligand binding domain homologue OM952_10180 PF00672 HAMP domain OM952_10190 PF01584 CheW-like domain OM952_10195 PF07238 PilZ domain OM952_10195 PF07317 Flagellar regulator YcgR OM952_10200 PF00672 HAMP domain OM952_10200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM952_10200 PF02203 Tar ligand binding domain homologue OM952_10205 PF00672 HAMP domain OM952_10205 PF02203 Tar ligand binding domain homologue OM952_10205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM952_10210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM952_10210 PF02203 Tar ligand binding domain homologue OM952_10210 PF00672 HAMP domain OM952_10215 PF02203 Tar ligand binding domain homologue OM952_10215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM952_10215 PF00672 HAMP domain OM952_10220 PF02203 Tar ligand binding domain homologue OM952_10220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM952_10220 PF00672 HAMP domain OM952_10235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM952_10235 PF02203 Tar ligand binding domain homologue OM952_10235 PF00672 HAMP domain OM952_10240 PF02203 Tar ligand binding domain homologue OM952_10240 PF00672 HAMP domain OM952_10240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM952_10245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM952_10245 PF00672 HAMP domain OM952_10250 PF00672 HAMP domain OM952_10250 PF02203 Tar ligand binding domain homologue OM952_10250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM952_10260 PF00672 HAMP domain OM952_10260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM952_10260 PF02203 Tar ligand binding domain homologue OM952_10265 PF08269 Cache domain OM952_10265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM952_10265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM952_10265 PF08269 Cache domain OM952_10275 PF02203 Tar ligand binding domain homologue OM952_10275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM952_10275 PF00672 HAMP domain OM952_10280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM952_10280 PF02203 Tar ligand binding domain homologue OM952_10280 PF00672 HAMP domain OM952_10285 PF09078 CheY binding OM952_10285 PF01584 CheW-like domain OM952_10285 PF02895 Signal transducing histidine kinase, homodimeric domain OM952_10285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM952_10285 PF01627 Hpt domain OM952_10290 PF00072 Response regulator receiver domain OM952_10300 PF01584 CheW-like domain OM952_10305 PF13614 AAA domain OM952_10310 PF00691 OmpA family OM952_10310 PF13677 Membrane MotB of proton-channel complex MotA/MotB OM952_10315 PF01618 MotA/TolQ/ExbB proton channel family OM952_10345 PF06429 Flagellar basal body rod FlgEFG protein C-terminal OM952_10345 PF00460 Flagella basal body rod protein OM952_10350 PF07559 Flagellar basal body protein FlaE OM952_10350 PF06429 Flagellar basal body rod FlgEFG protein C-terminal OM952_10350 PF00460 Flagella basal body rod protein OM952_10355 PF03963 Flagellar hook capping protein - N-terminal region OM952_10360 PF00460 Flagella basal body rod protein OM952_10360 PF06429 Flagellar basal body rod FlgEFG protein C-terminal OM952_10370 PF00072 Response regulator receiver domain OM952_10370 PF01584 CheW-like domain OM952_10390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM952_10390 PF00512 His Kinase A (phospho-acceptor) domain OM952_10390 PF00989 PAS fold OM952_10390 PF13426 PAS domain OM952_10390 PF13188 PAS domain OM952_10395 PF00563 EAL domain OM952_10395 PF00990 Diguanylate cyclase, GGDEF domain OM952_10395 PF03707 Bacterial signalling protein N terminal repeat OM952_10400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM952_10400 PF07730 Histidine kinase OM952_10405 PF00563 EAL domain OM952_10405 PF03707 Bacterial signalling protein N terminal repeat OM952_10405 PF00990 Diguanylate cyclase, GGDEF domain OM952_10415 PF12729 Four helix bundle sensory module for signal transduction OM952_10415 PF00672 HAMP domain OM952_10415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM952_10420 PF04356 Protein of unknown function (DUF489) OM952_10430 PF00293 NUDIX domain OM952_10440 PF02617 ATP-dependent Clp protease adaptor protein ClpS OM952_10445 PF02861 Clp amino terminal domain, pathogenicity island component OM952_10445 PF17871 AAA lid domain OM952_10445 PF10431 C-terminal, D2-small domain, of ClpB protein OM952_10445 PF00004 ATPase family associated with various cellular activities (AAA) OM952_10445 PF07724 AAA domain (Cdc48 subfamily) OM952_10450 PF01176 Translation initiation factor 1A / IF-1 OM952_10455 PF03588 Leucyl/phenylalanyl-tRNA protein transferase OM952_10465 PF07992 Pyridine nucleotide-disulphide oxidoreductase OM952_10470 PF01580 FtsK/SpoIIIE family OM952_10470 PF09397 Ftsk gamma domain OM952_10470 PF17854 FtsK alpha domain OM952_10470 PF13491 4TM region of DNA translocase FtsK/SpoIIIE OM952_10480 PF03548 Outer membrane lipoprotein carrier protein LolA OM952_10490 PF12002 MgsA AAA+ ATPase C terminal OM952_10490 PF00004 ATPase family associated with various cellular activities (AAA) OM952_10490 PF16193 AAA C-terminal domain OM952_10495 PF02537 CrcB-like protein, Camphor Resistance (CrcB) OM952_10500 PF00108 Thiolase, N-terminal domain OM952_10500 PF02803 Thiolase, C-terminal domain OM952_10505 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain OM952_10505 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain OM952_10505 PF00378 Enoyl-CoA hydratase/isomerase OM952_10515 PF00334 Nucleoside diphosphate kinase OM952_10520 PF04055 Radical SAM superfamily OM952_10530 PF13464 Domain of unknown function (DUF4115) OM952_10540 PF01011 PQQ enzyme repeat OM952_10540 PF13360 PQQ-like domain OM952_10545 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal OM952_10545 PF01926 50S ribosome-binding GTPase OM952_10550 PF00994 Probable molybdopterin binding domain OM952_10550 PF03454 MoeA C-terminal region (domain IV) OM952_10550 PF03453 MoeA N-terminal region (domain I and II) OM952_10555 PF00899 ThiF family OM952_10580 PF00107 Zinc-binding dehydrogenase OM952_10580 PF08240 Alcohol dehydrogenase GroES-like domain OM952_10580 PF13823 Alcohol dehydrogenase GroES-associated OM952_10590 PF03372 Endonuclease/Exonuclease/phosphatase family OM952_10600 PF00994 Probable molybdopterin binding domain OM952_10600 PF03454 MoeA C-terminal region (domain IV) OM952_10600 PF03453 MoeA N-terminal region (domain I and II) OM952_10605 PF12804 MobA-like NTP transferase domain OM952_10630 PF14824 Sirohaem biosynthesis protein central OM952_10630 PF10414 Sirohaem synthase dimerisation region OM952_10630 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases OM952_10635 PF03861 ANTAR domain OM952_10635 PF00072 Response regulator receiver domain OM952_10645 PF07690 Major Facilitator Superfamily OM952_10650 PF07992 Pyridine nucleotide-disulphide oxidoreductase OM952_10650 PF18267 Rubredoxin NAD+ reductase C-terminal domain OM952_10650 PF01077 Nitrite and sulphite reductase 4Fe-4S domain OM952_10650 PF04324 BFD-like [2Fe-2S] binding domain OM952_10650 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain OM952_10660 PF04324 BFD-like [2Fe-2S] binding domain OM952_10660 PF04879 Molybdopterin oxidoreductase Fe4S4 domain OM952_10660 PF00384 Molybdopterin oxidoreductase OM952_10660 PF01568 Molydopterin dinucleotide binding domain OM952_10665 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases OM952_10680 PF05974 Domain of unknown function (DUF892) OM952_10700 PF08448 PAS fold OM952_10700 PF00563 EAL domain OM952_10700 PF00990 Diguanylate cyclase, GGDEF domain OM952_10700 PF08447 PAS fold OM952_10705 PF12951 Passenger-associated-transport-repeat OM952_10705 PF12951 Passenger-associated-transport-repeat OM952_10710 PF00196 Bacterial regulatory proteins, luxR family OM952_10710 PF00072 Response regulator receiver domain OM952_10715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM952_10715 PF08448 PAS fold OM952_10715 PF13426 PAS domain OM952_10715 PF00512 His Kinase A (phospho-acceptor) domain OM952_10715 PF00072 Response regulator receiver domain OM952_10725 PF00873 AcrB/AcrD/AcrF family OM952_10730 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OM952_10735 PF03797 Autotransporter beta-domain OM952_10735 PF00082 Subtilase family OM952_10750 PF07995 Glucose / Sorbosone dehydrogenase OM952_10760 PF00872 Transposase, Mutator family OM952_10790 PF17091 Inovirus G7P protein OM952_10900 PF01609 Transposase DDE domain OM952_10900 PF05598 Transposase domain (DUF772) OM952_10940 PF07517 SecA DEAD-like domain OM952_10940 PF02810 SEC-C motif OM952_10940 PF07516 SecA Wing and Scaffold domain OM952_10940 PF01043 SecA preprotein cross-linking domain OM952_10950 PF00872 Transposase, Mutator family OM952_10965 PF12697 Alpha/beta hydrolase family OM952_10965 PF08241 Methyltransferase domain OM952_10980 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase OM952_10980 PF02585 GlcNAc-PI de-N-acetylase OM952_11005 PF18340 DNA relaxase TraI 2B/2B-like domain OM952_11005 PF07057 DNA helicase TraI OM952_11005 PF18272 single-stranded DNA binding TraI N-terminal subdomain OM952_11005 PF08751 TrwC relaxase OM952_11060 PF00872 Transposase, Mutator family OM952_11075 PF06616 BsuBI/PstI restriction endonuclease domain OM952_11075 PF17728 BsuBI/PstI restriction endonuclease HTH domain OM952_11080 PF13614 AAA domain OM952_11125 PF02810 SEC-C motif OM952_11125 PF03695 Uncharacterised protein family (UPF0149) OM952_11140 PF00239 Resolvase, N terminal domain OM952_11140 PF02796 Helix-turn-helix domain of resolvase OM952_11155 PF00872 Transposase, Mutator family OM952_11185 PF00440 Bacterial regulatory proteins, tetR family OM952_11195 PF01106 NifU-like domain OM952_11200 PF01329 Pterin 4 alpha carbinolamine dehydratase OM952_11210 PF02535 ZIP Zinc transporter OM952_11215 PF11737 Protein of unknown function (DUF3300) OM952_11220 PF00849 RNA pseudouridylate synthase OM952_11220 PF01479 S4 domain OM952_11225 PF12111 Polyribonucleotide phosphorylase C terminal OM952_11225 PF10150 Ribonuclease E/G family OM952_11225 PF00575 S1 RNA binding domain OM952_11230 PF05598 Transposase domain (DUF772) OM952_11230 PF01609 Transposase DDE domain OM952_11235 PF00072 Response regulator receiver domain OM952_11235 PF00196 Bacterial regulatory proteins, luxR family OM952_11240 PF00581 Rhodanese-like domain OM952_11240 PF17773 UPF0176 acylphosphatase like domain OM952_11250 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase OM952_11260 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain OM952_11260 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain OM952_11260 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain OM952_11285 PF01066 CDP-alcohol phosphatidyltransferase OM952_11290 PF08459 UvrC Helix-hairpin-helix N-terminal OM952_11290 PF02151 UvrB/uvrC motif OM952_11290 PF01541 GIY-YIG catalytic domain OM952_11300 PF01451 Low molecular weight phosphotyrosine protein phosphatase OM952_11305 PF02348 Cytidylyltransferase OM952_11310 PF02606 Tetraacyldisaccharide-1-P 4'-kinase OM952_11315 PF00005 ABC transporter OM952_11315 PF00664 ABC transporter transmembrane region OM952_11325 PF01618 MotA/TolQ/ExbB proton channel family OM952_11330 PF00753 Metallo-beta-lactamase superfamily OM952_11330 PF03772 Competence protein OM952_11340 PF00005 ABC transporter OM952_11345 PF02687 FtsX-like permease family OM952_11345 PF12704 MacB-like periplasmic core domain OM952_11355 PF03937 Flavinator of succinate dehydrogenase OM952_11360 PF13085 2Fe-2S iron-sulfur cluster binding domain OM952_11370 PF00890 FAD binding domain OM952_11370 PF02910 Fumarate reductase flavoprotein C-term OM952_11375 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit OM952_11380 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit OM952_11390 PF01571 Aminomethyltransferase folate-binding domain OM952_11395 PF17912 MalK OB fold domain OM952_11395 PF00005 ABC transporter OM952_11400 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain OM952_11400 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain OM952_11405 PF02685 Glucokinase OM952_11410 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase OM952_11415 PF00920 Dehydratase family OM952_11420 PF01081 KDPG and KHG aldolase OM952_11425 PF00873 AcrB/AcrD/AcrF family OM952_11430 PF00873 AcrB/AcrD/AcrF family OM952_11435 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OM952_11445 PF00034 Cytochrome c OM952_11485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM952_11485 PF00512 His Kinase A (phospho-acceptor) domain OM952_11485 PF09308 LuxQ, periplasmic OM952_11485 PF00072 Response regulator receiver domain OM952_11490 PF16921 Tex protein YqgF-like domain OM952_11490 PF00575 S1 RNA binding domain OM952_11490 PF09371 Tex-like protein N-terminal domain OM952_11490 PF17674 HHH domain OM952_11500 PF01266 FAD dependent oxidoreductase OM952_11500 PF00355 Rieske [2Fe-2S] domain OM952_11515 PF00561 alpha/beta hydrolase fold OM952_11525 PF01066 CDP-alcohol phosphatidyltransferase OM952_11545 PF03618 Kinase/pyrophosphorylase OM952_11550 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain OM952_11550 PF00391 PEP-utilising enzyme, mobile domain OM952_11550 PF02896 PEP-utilising enzyme, TIM barrel domain OM952_11560 PF00929 Exonuclease OM952_11565 PF14437 MafB19-like deaminase OM952_11570 PF02742 Iron dependent repressor, metal binding and dimerisation domain OM952_11570 PF01325 Iron dependent repressor, N-terminal DNA binding domain OM952_11575 PF01566 Natural resistance-associated macrophage protein OM952_11580 PF00561 alpha/beta hydrolase fold OM952_11595 PF05977 Transmembrane secretion effector OM952_11600 PF07969 Amidohydrolase family OM952_11610 PF00857 Isochorismatase family OM952_11625 PF00196 Bacterial regulatory proteins, luxR family OM952_11625 PF00072 Response regulator receiver domain OM952_11655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM952_11655 PF03466 LysR substrate binding domain OM952_11660 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus OM952_11660 PF00361 Proton-conducting membrane transporter OM952_11660 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus OM952_11665 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) OM952_11675 PF08240 Alcohol dehydrogenase GroES-like domain OM952_11675 PF00107 Zinc-binding dehydrogenase OM952_11680 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase OM952_11685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM952_11685 PF03466 LysR substrate binding domain OM952_11690 PF13333 Integrase core domain OM952_11690 PF00665 Integrase core domain OM952_11690 PF13276 HTH-like domain OM952_11700 PF12161 HsdM N-terminal domain OM952_11700 PF02384 N-6 DNA Methylase OM952_11715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM952_11715 PF03466 LysR substrate binding domain OM952_11760 PF00117 Glutamine amidotransferase class-I OM952_11760 PF00958 GMP synthase C terminal domain OM952_11760 PF02540 NAD synthase OM952_11765 PF00571 CBS domain OM952_11765 PF00478 IMP dehydrogenase / GMP reductase domain OM952_11770 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain OM952_11770 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain OM952_11780 PF00999 Sodium/hydrogen exchanger family OM952_11780 PF02254 TrkA-N domain OM952_11785 PF00483 Nucleotidyl transferase OM952_11790 PF02719 Polysaccharide biosynthesis protein OM952_11795 PF00953 Glycosyl transferase family 4 OM952_11800 PF18073 Rubredoxin metal binding domain OM952_11810 PF00216 Bacterial DNA-binding protein OM952_11815 PF00575 S1 RNA binding domain OM952_11820 PF02224 Cytidylate kinase OM952_11825 PF00444 Ribosomal protein L36 OM952_11835 PF04371 Porphyromonas-type peptidyl-arginine deiminase OM952_11840 PF00795 Carbon-nitrogen hydrolase OM952_11865 PF00528 Binding-protein-dependent transport system inner membrane component OM952_11870 PF00528 Binding-protein-dependent transport system inner membrane component OM952_11890 PF00356 Bacterial regulatory proteins, lacI family OM952_11900 PF03795 YCII-related domain OM952_11905 PF02616 Segregation and condensation protein ScpA OM952_11910 PF04079 Segregation and condensation complex subunit ScpB OM952_11915 PF00849 RNA pseudouridylate synthase OM952_11915 PF01479 S4 domain OM952_11930 PF00795 Carbon-nitrogen hydrolase OM952_11935 PF00155 Aminotransferase class I and II OM952_11940 PF00005 ABC transporter OM952_11945 PF03379 CcmB protein OM952_11950 PF01578 Cytochrome C assembly protein OM952_11960 PF03100 CcmE OM952_11965 PF01578 Cytochrome C assembly protein OM952_11965 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal OM952_11970 PF08534 Redoxin OM952_11975 PF03918 Cytochrome C biogenesis protein OM952_11985 PF00561 alpha/beta hydrolase fold OM952_11995 PF00664 ABC transporter transmembrane region OM952_11995 PF00005 ABC transporter OM952_12000 PF00664 ABC transporter transmembrane region OM952_12000 PF00005 ABC transporter OM952_12005 PF01654 Cytochrome bd terminal oxidase subunit I OM952_12010 PF02322 Cytochrome bd terminal oxidase subunit II OM952_12030 PF02129 X-Pro dipeptidyl-peptidase (S15 family) OM952_12030 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain OM952_12040 PF00171 Aldehyde dehydrogenase family OM952_12045 PF00696 Amino acid kinase family OM952_12045 PF01472 PUA domain OM952_12055 PF00206 Lyase OM952_12060 PF01118 Semialdehyde dehydrogenase, NAD binding domain OM952_12070 PF00696 Amino acid kinase family OM952_12070 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase OM952_12075 PF01546 Peptidase family M20/M25/M40 OM952_12075 PF07687 Peptidase dimerisation domain OM952_12085 PF00764 Arginosuccinate synthase OM952_12090 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain OM952_12090 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain OM952_12100 PF09190 DALR domain OM952_12100 PF01406 tRNA synthetases class I (C) catalytic domain OM952_12105 PF02657 Fe-S metabolism associated domain OM952_12115 PF01258 Prokaryotic dksA/traR C4-type zinc finger OM952_12125 PF01809 Putative membrane protein insertion efficiency factor OM952_12130 PF01979 Amidohydrolase family OM952_12135 PF08460 Bacterial SH3 domain OM952_12135 PF01551 Peptidase family M23 OM952_12150 PF06751 Ethanolamine ammonia lyase large subunit (EutB) OM952_12155 PF05985 Ethanolamine ammonia-lyase light chain (EutC) OM952_12165 PF00753 Metallo-beta-lactamase superfamily OM952_12185 PF01609 Transposase DDE domain OM952_12185 PF05598 Transposase domain (DUF772) OM952_12195 PF00295 Glycosyl hydrolases family 28 OM952_12210 PF13419 Haloacid dehalogenase-like hydrolase OM952_12220 PF01979 Amidohydrolase family OM952_12230 PF01132 Elongation factor P (EF-P) OB domain OM952_12230 PF08207 Elongation factor P (EF-P) KOW-like domain OM952_12230 PF09285 Elongation factor P, C-terminal OM952_12235 PF04055 Radical SAM superfamily OM952_12240 PF00990 Diguanylate cyclase, GGDEF domain OM952_12240 PF03707 Bacterial signalling protein N terminal repeat OM952_12240 PF00563 EAL domain OM952_12240 PF13188 PAS domain OM952_12250 PF00588 SpoU rRNA Methylase family OM952_12255 PF00459 Inositol monophosphatase family OM952_12260 PF02777 Iron/manganese superoxide dismutases, C-terminal domain OM952_12260 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain OM952_12265 PF00545 ribonuclease OM952_12275 PF12848 ABC transporter OM952_12275 PF16326 ABC transporter C-terminal domain OM952_12275 PF00005 ABC transporter OM952_12280 PF03880 DbpA RNA binding domain OM952_12280 PF00270 DEAD/DEAH box helicase OM952_12280 PF00271 Helicase conserved C-terminal domain OM952_12285 PF00156 Phosphoribosyl transferase domain OM952_12290 PF02696 Uncharacterized ACR, YdiU/UPF0061 family OM952_12295 PF00135 Carboxylesterase family OM952_12305 PF14497 Glutathione S-transferase, C-terminal domain OM952_12305 PF02798 Glutathione S-transferase, N-terminal domain OM952_12310 PF00313 'Cold-shock' DNA-binding domain OM952_12315 PF07152 YaeQ protein OM952_12325 PF00990 Diguanylate cyclase, GGDEF domain OM952_12325 PF00072 Response regulator receiver domain OM952_12325 PF00563 EAL domain OM952_12330 PF01435 Peptidase family M48 OM952_12335 PF00749 tRNA synthetases class I (E and Q), catalytic domain OM952_12340 PF00106 short chain dehydrogenase OM952_12345 PF05233 PHB accumulation regulatory domain OM952_12345 PF07879 PHB/PHA accumulation regulator DNA-binding domain OM952_12365 PF01119 DNA mismatch repair protein, C-terminal domain OM952_12365 PF08676 MutL C terminal dimerisation domain OM952_12370 PF01520 N-acetylmuramoyl-L-alanine amidase OM952_12370 PF11741 AMIN domain OM952_12375 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE OM952_12380 PF01256 Carbohydrate kinase OM952_12380 PF03853 YjeF-related protein N-terminus OM952_12385 PF08331 Domain of unknown function (DUF1730) OM952_12390 PF02601 Exonuclease VII, large subunit OM952_12390 PF13742 OB-fold nucleic acid binding domain OM952_12400 PF03781 Sulfatase-modifying factor enzyme 1 OM952_12410 PF01612 3'-5' exonuclease OM952_12410 PF00570 HRDC domain OM952_12415 PF01068 ATP dependent DNA ligase domain OM952_12415 PF13298 DNA polymerase Ligase (LigD) OM952_12415 PF04679 ATP dependent DNA ligase C terminal region OM952_12445 PF01584 CheW-like domain OM952_12450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM952_12450 PF00672 HAMP domain OM952_12450 PF02743 Cache domain OM952_12455 PF02245 Methylpurine-DNA glycosylase (MPG) OM952_12460 PF00270 DEAD/DEAH box helicase OM952_12460 PF00271 Helicase conserved C-terminal domain OM952_12460 PF08494 DEAD/H associated OM952_12480 PF04386 Stringent starvation protein B OM952_12485 PF02798 Glutathione S-transferase, N-terminal domain OM952_12485 PF00043 Glutathione S-transferase, C-terminal domain OM952_12490 PF02167 Cytochrome C1 family OM952_12495 PF00032 Cytochrome b(C-terminal)/b6/petD OM952_12495 PF00033 Cytochrome b/b6/petB OM952_12500 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal OM952_12500 PF00355 Rieske [2Fe-2S] domain OM952_12505 PF01464 Transglycosylase SLT domain OM952_12520 PF01938 TRAM domain OM952_12520 PF04055 Radical SAM superfamily OM952_12520 PF00919 Uncharacterized protein family UPF0004 OM952_12525 PF02562 PhoH-like protein OM952_12535 PF02130 Uncharacterized protein family UPF0054 OM952_12545 PF00571 CBS domain OM952_12545 PF03471 Transporter associated domain OM952_12560 PF00171 Aldehyde dehydrogenase family OM952_12565 PF00528 Binding-protein-dependent transport system inner membrane component OM952_12570 PF00528 Binding-protein-dependent transport system inner membrane component OM952_12575 PF00005 ABC transporter OM952_12575 PF08402 TOBE domain OM952_12580 PF02321 Outer membrane efflux protein OM952_12585 PF07690 Major Facilitator Superfamily OM952_12590 PF13533 Biotin-lipoyl like OM952_12595 PF13416 Bacterial extracellular solute-binding protein OM952_12600 PF00202 Aminotransferase class-III OM952_12610 PF00120 Glutamine synthetase, catalytic domain OM952_12615 PF07722 Peptidase C26 OM952_12620 PF00120 Glutamine synthetase, catalytic domain OM952_12625 PF01266 FAD dependent oxidoreductase OM952_12630 PF00990 Diguanylate cyclase, GGDEF domain OM952_12630 PF00072 Response regulator receiver domain OM952_12635 PF01814 Hemerythrin HHE cation binding domain OM952_12640 PF00083 Sugar (and other) transporter OM952_12640 PF07690 Major Facilitator Superfamily OM952_12650 PF00384 Molybdopterin oxidoreductase OM952_12655 PF02634 FdhD/NarQ family OM952_12660 PF07690 Major Facilitator Superfamily OM952_12670 PF00202 Aminotransferase class-III OM952_12680 PF04286 Protein of unknown function (DUF445) OM952_12685 PF00672 HAMP domain OM952_12685 PF00072 Response regulator receiver domain OM952_12685 PF00512 His Kinase A (phospho-acceptor) domain OM952_12685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM952_12685 PF01627 Hpt domain OM952_12685 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) OM952_12690 PF00072 Response regulator receiver domain OM952_12695 PF07690 Major Facilitator Superfamily OM952_12700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM952_12700 PF00672 HAMP domain OM952_12700 PF02203 Tar ligand binding domain homologue OM952_12730 PF05088 Bacterial NAD-glutamate dehydrogenase OM952_12740 PF00529 HlyD membrane-fusion protein of T1SS OM952_12740 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OM952_12745 PF00873 AcrB/AcrD/AcrF family OM952_12750 PF00356 Bacterial regulatory proteins, lacI family OM952_12755 PF00381 PTS HPr component phosphorylation site OM952_12755 PF02896 PEP-utilising enzyme, TIM barrel domain OM952_12755 PF00391 PEP-utilising enzyme, mobile domain OM952_12755 PF05524 PEP-utilising enzyme, N-terminal OM952_12755 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 OM952_12760 PF00294 pfkB family carbohydrate kinase OM952_12765 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit OM952_12785 PF00872 Transposase, Mutator family OM952_12790 PF07549 SecD/SecF GG Motif OM952_12790 PF02355 Protein export membrane protein OM952_12795 PF02355 Protein export membrane protein OM952_12795 PF13721 SecD export protein N-terminal TM region OM952_12795 PF07549 SecD/SecF GG Motif OM952_12800 PF02699 Preprotein translocase subunit OM952_12805 PF01702 Queuine tRNA-ribosyltransferase OM952_12810 PF02547 Queuosine biosynthesis protein OM952_12850 PF00759 Glycosyl hydrolase family 9 OM952_12850 PF02927 Cellulase N-terminal ig-like domain OM952_12860 PF00037 4Fe-4S binding domain OM952_12870 PF01467 Cytidylyltransferase-like OM952_12880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM952_12880 PF00183 Hsp90 protein OM952_12905 PF03421 YopJ Serine/Threonine acetyltransferase OM952_12950 PF03135 CagE, TrbE, VirB family, component of type IV transporter system OM952_12955 PF05101 Type IV secretory pathway, VirB3-like protein OM952_12965 PF01464 Transglycosylase SLT domain OM952_12970 PF00437 Type II/IV secretion system protein OM952_12975 PF03743 Bacterial conjugation TrbI-like protein OM952_12995 PF02534 Type IV secretory system Conjugative DNA transfer OM952_13010 PF12344 Ultra-violet resistance protein B OM952_13010 PF02151 UvrB/uvrC motif OM952_13010 PF17757 UvrB interaction domain OM952_13010 PF00271 Helicase conserved C-terminal domain OM952_13010 PF04851 Type III restriction enzyme, res subunit OM952_13190 PF00182 Chitinase class I OM952_13245 PF01555 DNA methylase OM952_13280 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor OM952_13280 PF07963 Prokaryotic N-terminal methylation motif OM952_13285 PF05567 Neisseria PilC beta-propeller domain OM952_13315 PF00872 Transposase, Mutator family OM952_13325 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases OM952_13325 PF03641 Possible lysine decarboxylase OM952_13325 PF11892 Domain of unknown function (DUF3412) OM952_13330 PF00593 TonB dependent receptor OM952_13335 PF01914 MarC family integral membrane protein OM952_13345 PF00462 Glutaredoxin OM952_13350 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain OM952_13350 PF02777 Iron/manganese superoxide dismutases, C-terminal domain OM952_13355 PF02222 ATP-grasp domain OM952_13355 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain OM952_13360 PF00731 AIR carboxylase OM952_13370 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain OM952_13370 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain OM952_13380 PF03725 3' exoribonuclease family, domain 2 OM952_13380 PF00013 KH domain OM952_13380 PF00575 S1 RNA binding domain OM952_13380 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain OM952_13380 PF01138 3' exoribonuclease family, domain 1 OM952_13385 PF00312 Ribosomal protein S15 OM952_13390 PF09157 Pseudouridine synthase II TruB, C-terminal OM952_13390 PF01509 TruB family pseudouridylate synthase (N terminal domain) OM952_13390 PF16198 tRNA pseudouridylate synthase B C-terminal domain OM952_13395 PF02033 Ribosome-binding factor A OM952_13400 PF08364 Bacterial translation initiation factor IF-2 associated region OM952_13400 PF04760 Translation initiation factor IF-2, N-terminal region OM952_13400 PF00009 Elongation factor Tu GTP binding domain OM952_13400 PF11987 Translation-initiation factor 2 OM952_13405 PF08529 NusA N-terminal domain OM952_13405 PF00575 S1 RNA binding domain OM952_13405 PF13184 NusA-like KH domain OM952_13410 PF02576 RimP N-terminal domain OM952_13410 PF17384 RimP C-terminal SH3 domain OM952_13420 PF00361 Proton-conducting membrane transporter OM952_13425 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus OM952_13425 PF00361 Proton-conducting membrane transporter OM952_13430 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus OM952_13430 PF00361 Proton-conducting membrane transporter OM952_13435 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L OM952_13440 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 OM952_13445 PF12838 4Fe-4S dicluster domain OM952_13450 PF00146 NADH dehydrogenase OM952_13455 PF00384 Molybdopterin oxidoreductase OM952_13455 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region OM952_13455 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal OM952_13460 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region OM952_13460 PF10531 SLBB domain OM952_13460 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit OM952_13470 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit OM952_13475 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit OM952_13480 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit OM952_13485 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 OM952_13500 PF00121 Triosephosphate isomerase OM952_13505 PF00106 short chain dehydrogenase OM952_13520 PF00990 Diguanylate cyclase, GGDEF domain OM952_13520 PF00563 EAL domain OM952_13520 PF03707 Bacterial signalling protein N terminal repeat OM952_13535 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I OM952_13535 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II OM952_13535 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain OM952_13535 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III OM952_13540 PF17848 Acetyl-coA carboxylase zinc finger domain OM952_13540 PF01039 Carboxyl transferase domain OM952_13545 PF00290 Tryptophan synthase alpha chain OM952_13555 PF00291 Pyridoxal-phosphate dependent enzyme OM952_13560 PF03466 LysR substrate binding domain OM952_13560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM952_13565 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase OM952_13570 PF01416 tRNA pseudouridine synthase OM952_13585 PF02774 Semialdehyde dehydrogenase, dimerisation domain OM952_13585 PF01118 Semialdehyde dehydrogenase, NAD binding domain OM952_13590 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain OM952_13590 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain OM952_13595 PF01264 Chorismate synthase OM952_13600 PF05175 Methyltransferase small domain OM952_13605 PF02630 SCO1/SenC OM952_13610 PF02666 Phosphatidylserine decarboxylase OM952_13620 PF05872 Bacterial protein of unknown function (DUF853) OM952_13645 PF01272 Transcription elongation factor, GreA/GreB, C-term OM952_13645 PF03449 Transcription elongation factor, N-terminal OM952_13650 PF04055 Radical SAM superfamily OM952_13650 PF18693 TRAM domain OM952_13650 PF00919 Uncharacterized protein family UPF0004 OM952_13655 PF01738 Dienelactone hydrolase family OM952_13675 PF00692 dUTPase OM952_13680 PF10609 NUBPL iron-transfer P-loop NTPase OM952_13685 PF07715 TonB-dependent Receptor Plug Domain OM952_13685 PF00593 TonB dependent receptor OM952_13710 PF05649 Peptidase family M13 OM952_13710 PF01431 Peptidase family M13 OM952_13735 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain OM952_13735 PF07992 Pyridine nucleotide-disulphide oxidoreductase OM952_13740 PF01266 FAD dependent oxidoreductase OM952_13745 PF04235 Protein of unknown function (DUF418) OM952_13750 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase OM952_13755 PF00877 NlpC/P60 family OM952_13760 PF00877 NlpC/P60 family OM952_13775 PF00375 Sodium:dicarboxylate symporter family OM952_13780 PF00245 Alkaline phosphatase OM952_13785 PF01171 PP-loop family OM952_13785 PF11734 TilS substrate C-terminal domain OM952_13785 PF09179 TilS substrate binding domain OM952_13790 PF02609 Exonuclease VII small subunit OM952_13795 PF00348 Polyprenyl synthetase OM952_13800 PF14521 Lysine-specific metallo-endopeptidase OM952_13810 PF01523 Putative modulator of DNA gyrase OM952_13815 PF04751 Protein of unknown function (DUF615) OM952_13820 PF01523 Putative modulator of DNA gyrase OM952_13830 PF13502 AsmA-like C-terminal region OM952_13830 PF13116 Protein of unknown function OM952_13835 PF10150 Ribonuclease E/G family OM952_13835 PF00575 S1 RNA binding domain OM952_13840 PF02545 Maf-like protein OM952_13845 PF04402 Protein of unknown function (DUF541) OM952_13860 PF02590 Predicted SPOUT methyltransferase OM952_13875 PF01467 Cytidylyltransferase-like OM952_13890 PF00133 tRNA synthetases class I (I, L, M and V) OM952_13890 PF08264 Anticodon-binding domain of tRNA OM952_13890 PF13603 Leucyl-tRNA synthetase, Domain 2 OM952_13900 PF00085 Thioredoxin OM952_13920 PF07043 Protein of unknown function (DUF1328) OM952_13925 PF04070 Domain of unknown function (DUF378) OM952_13930 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD OM952_13940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM952_13940 PF03466 LysR substrate binding domain OM952_13945 PF01022 Bacterial regulatory protein, arsR family OM952_13975 PF00005 ABC transporter OM952_13975 PF00664 ABC transporter transmembrane region OM952_13985 PF00873 AcrB/AcrD/AcrF family OM952_14000 PF02321 Outer membrane efflux protein OM952_14005 PF00072 Response regulator receiver domain OM952_14005 PF00486 Transcriptional regulatory protein, C terminal OM952_14010 PF00672 HAMP domain OM952_14010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM952_14010 PF00512 His Kinase A (phospho-acceptor) domain OM952_14015 PF00999 Sodium/hydrogen exchanger family OM952_14020 PF00144 Beta-lactamase OM952_14025 PF03737 Aldolase/RraA OM952_14040 PF00990 Diguanylate cyclase, GGDEF domain OM952_14045 PF01479 S4 domain OM952_14045 PF00849 RNA pseudouridylate synthase OM952_14050 PF00563 EAL domain OM952_14050 PF00990 Diguanylate cyclase, GGDEF domain OM952_14050 PF08448 PAS fold OM952_14055 PF00271 Helicase conserved C-terminal domain OM952_14055 PF03880 DbpA RNA binding domain OM952_14055 PF00270 DEAD/DEAH box helicase OM952_14060 PF04542 Sigma-70 region 2 OM952_14060 PF08281 Sigma-70, region 4 OM952_14105 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain OM952_14105 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain OM952_14115 PF00654 Voltage gated chloride channel OM952_14120 PF00107 Zinc-binding dehydrogenase OM952_14120 PF08240 Alcohol dehydrogenase GroES-like domain OM952_14135 PF07715 TonB-dependent Receptor Plug Domain OM952_14135 PF00593 TonB dependent receptor OM952_14155 PF01483 Proprotein convertase P-domain OM952_14155 PF00082 Subtilase family OM952_14165 PF00082 Subtilase family OM952_14165 PF01483 Proprotein convertase P-domain OM952_14175 PF00248 Aldo/keto reductase family OM952_14180 PF07690 Major Facilitator Superfamily OM952_14185 PF03466 LysR substrate binding domain OM952_14185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM952_14195 PF06719 AraC-type transcriptional regulator N-terminus OM952_14195 PF12833 Helix-turn-helix domain OM952_14205 PF16859 Tetracyclin repressor-like, C-terminal domain OM952_14205 PF00440 Bacterial regulatory proteins, tetR family OM952_14210 PF02321 Outer membrane efflux protein OM952_14215 PF00873 AcrB/AcrD/AcrF family OM952_14220 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OM952_14220 PF00529 HlyD membrane-fusion protein of T1SS OM952_14230 PF01475 Ferric uptake regulator family OM952_14235 PF00749 tRNA synthetases class I (E and Q), catalytic domain OM952_14260 PF06123 Inner membrane protein CreD OM952_14280 PF00486 Transcriptional regulatory protein, C terminal OM952_14280 PF00072 Response regulator receiver domain OM952_14285 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ OM952_14300 PF02559 CarD-like/TRCF domain OM952_14300 PF00271 Helicase conserved C-terminal domain OM952_14300 PF03461 TRCF domain OM952_14300 PF17757 UvrB interaction domain OM952_14300 PF00270 DEAD/DEAH box helicase OM952_14310 PF01627 Hpt domain OM952_14310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM952_14310 PF01584 CheW-like domain OM952_14310 PF02895 Signal transducing histidine kinase, homodimeric domain OM952_14310 PF09078 CheY binding OM952_14315 PF02203 Tar ligand binding domain homologue OM952_14315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM952_14315 PF00672 HAMP domain OM952_14320 PF01584 CheW-like domain OM952_14325 PF00563 EAL domain OM952_14325 PF00990 Diguanylate cyclase, GGDEF domain OM952_14325 PF13426 PAS domain OM952_14330 PF01739 CheR methyltransferase, SAM binding domain OM952_14330 PF03705 CheR methyltransferase, all-alpha domain OM952_14335 PF00072 Response regulator receiver domain OM952_14335 PF01339 CheB methylesterase OM952_14345 PF05649 Peptidase family M13 OM952_14345 PF01431 Peptidase family M13 OM952_14355 PF00300 Histidine phosphatase superfamily (branch 1) OM952_14360 PF04493 Endonuclease V OM952_14370 PF05726 Pirin C-terminal cupin domain OM952_14370 PF02678 Pirin OM952_14385 PF05726 Pirin C-terminal cupin domain OM952_14385 PF02678 Pirin OM952_14390 PF02554 Carbon starvation protein CstA OM952_14390 PF13722 5TM C-terminal transporter carbon starvation CstA OM952_14395 PF04328 Selenoprotein, putative OM952_14405 PF12796 Ankyrin repeats (3 copies) OM952_14430 PF13478 XdhC Rossmann domain OM952_14430 PF02625 XdhC and CoxI family OM952_14435 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase OM952_14435 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain OM952_14440 PF00941 FAD binding domain in molybdopterin dehydrogenase OM952_14440 PF03450 CO dehydrogenase flavoprotein C-terminal domain OM952_14445 PF01799 [2Fe-2S] binding domain OM952_14445 PF10518 TAT (twin-arginine translocation) pathway signal sequence OM952_14445 PF00111 2Fe-2S iron-sulfur cluster binding domain OM952_14450 PF08240 Alcohol dehydrogenase GroES-like domain OM952_14450 PF00107 Zinc-binding dehydrogenase OM952_14450 PF16197 Ketoacyl-synthetase C-terminal extension OM952_14450 PF14765 Polyketide synthase dehydratase OM952_14450 PF00550 Phosphopantetheine attachment site OM952_14450 PF08659 KR domain OM952_14450 PF00109 Beta-ketoacyl synthase, N-terminal domain OM952_14450 PF00698 Acyl transferase domain OM952_14450 PF02801 Beta-ketoacyl synthase, C-terminal domain OM952_14455 PF00360 Phytochrome region OM952_14455 PF00990 Diguanylate cyclase, GGDEF domain OM952_14455 PF01590 GAF domain OM952_14455 PF00563 EAL domain OM952_14460 PF00436 Single-strand binding protein family OM952_14465 PF00348 Polyprenyl synthetase OM952_14475 PF02875 Mur ligase family, glutamate ligase domain OM952_14475 PF08245 Mur ligase middle domain OM952_14490 PF00696 Amino acid kinase family OM952_14490 PF01842 ACT domain OM952_14495 PF02567 Phenazine biosynthesis-like protein OM952_14500 PF02567 Phenazine biosynthesis-like protein OM952_14510 PF02566 OsmC-like protein OM952_14515 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain OM952_14515 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain OM952_14520 PF03652 Holliday junction resolvase OM952_14525 PF02622 Uncharacterized ACR, COG1678 OM952_14530 PF13687 Domain of unknown function (DUF4153) OM952_14535 PF00117 Glutamine amidotransferase class-I OM952_14535 PF03352 Methyladenine glycosylase OM952_14535 PF13673 Acetyltransferase (GNAT) domain OM952_14535 PF13302 Acetyltransferase (GNAT) domain OM952_14535 PF00958 GMP synthase C terminal domain OM952_14550 PF00437 Type II/IV secretion system protein OM952_14555 PF00437 Type II/IV secretion system protein OM952_14560 PF01168 Alanine racemase, N-terminal domain OM952_14565 PF03807 NADP oxidoreductase coenzyme F420-dependent OM952_14565 PF14748 Pyrroline-5-carboxylate reductase dimerisation OM952_14575 PF01551 Peptidase family M23 OM952_14595 PF01965 DJ-1/PfpI family OM952_14605 PF02082 Transcriptional regulator OM952_14610 PF01458 Uncharacterized protein family (UPF0051) OM952_14615 PF00005 ABC transporter OM952_14620 PF01458 Uncharacterized protein family (UPF0051) OM952_14625 PF00266 Aminotransferase class-V OM952_14630 PF00583 Acetyltransferase (GNAT) family OM952_14635 PF00355 Rieske [2Fe-2S] domain OM952_14640 PF00593 TonB dependent receptor OM952_14640 PF07715 TonB-dependent Receptor Plug Domain OM952_14645 PF18331 PKHD-type hydroxylase C-terminal domain OM952_14645 PF13640 2OG-Fe(II) oxygenase superfamily OM952_14670 PF00872 Transposase, Mutator family OM952_14675 PF02424 ApbE family OM952_14680 PF00667 FAD binding domain OM952_14680 PF00258 Flavodoxin OM952_14680 PF00175 Oxidoreductase NAD-binding domain OM952_14685 PF05962 HutD OM952_14705 PF01636 Phosphotransferase enzyme family OM952_14710 PF00483 Nucleotidyl transferase OM952_14715 PF00308 Bacterial dnaA protein OM952_14720 PF01594 AI-2E family transporter OM952_14730 PF02769 AIR synthase related protein, C-terminal domain OM952_14730 PF00586 AIR synthase related protein, N-terminal domain OM952_14745 PF00551 Formyl transferase OM952_14765 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) OM952_14770 PF01722 BolA-like protein OM952_14775 PF00571 CBS domain OM952_14775 PF01380 SIS domain OM952_14790 PF03968 OstA-like protein OM952_14795 PF00005 ABC transporter OM952_14800 PF00309 Sigma-54 factor, Activator interacting domain (AID) OM952_14800 PF04963 Sigma-54 factor, core binding domain OM952_14800 PF04552 Sigma-54, DNA binding domain OM952_14805 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein OM952_14810 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 OM952_14815 PF02603 HPr Serine kinase N terminus OM952_14815 PF07475 HPr Serine kinase C-terminal domain OM952_14820 PF03668 P-loop ATPase protein family OM952_14830 PF00381 PTS HPr component phosphorylation site OM952_14845 PF00571 CBS domain OM952_14845 PF01769 Divalent cation transporter OM952_14845 PF03448 MgtE intracellular N domain OM952_14850 PF00756 Putative esterase OM952_14855 PF02322 Cytochrome bd terminal oxidase subunit II OM952_14885 PF03743 Bacterial conjugation TrbI-like protein OM952_14905 PF01751 Toprim domain OM952_14905 PF01131 DNA topoisomerase OM952_14920 PF13406 Transglycosylase SLT domain OM952_14990 PF01654 Cytochrome bd terminal oxidase subunit I OM952_15000 PF00324 Amino acid permease OM952_15020 PF00561 alpha/beta hydrolase fold OM952_15025 PF00196 Bacterial regulatory proteins, luxR family OM952_15030 PF00324 Amino acid permease OM952_15050 PF12706 Beta-lactamase superfamily domain OM952_15055 PF04820 Tryptophan halogenase OM952_15090 PF09278 MerR, DNA binding OM952_15090 PF00376 MerR family regulatory protein OM952_15095 PF07690 Major Facilitator Superfamily OM952_15100 PF03738 Glutathionylspermidine synthase preATP-grasp OM952_15125 PF04012 PspA/IM30 family OM952_15135 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region OM952_15135 PF01243 Pyridoxamine 5'-phosphate oxidase OM952_15140 PF01202 Shikimate kinase OM952_15145 PF01761 3-dehydroquinate synthase OM952_15155 PF01208 Uroporphyrinogen decarboxylase (URO-D) OM952_15160 PF07690 Major Facilitator Superfamily OM952_15165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM952_15165 PF17149 Periplasmic sensor domain found in signal transduction proteins OM952_15165 PF00672 HAMP domain OM952_15165 PF00512 His Kinase A (phospho-acceptor) domain OM952_15165 PF01627 Hpt domain OM952_15165 PF00072 Response regulator receiver domain OM952_15170 PF00672 HAMP domain OM952_15170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM952_15170 PF00512 His Kinase A (phospho-acceptor) domain OM952_15170 PF01627 Hpt domain OM952_15170 PF00072 Response regulator receiver domain OM952_15170 PF17149 Periplasmic sensor domain found in signal transduction proteins OM952_15175 PF00072 Response regulator receiver domain OM952_15175 PF00672 HAMP domain OM952_15175 PF17149 Periplasmic sensor domain found in signal transduction proteins OM952_15175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM952_15175 PF00512 His Kinase A (phospho-acceptor) domain OM952_15175 PF01627 Hpt domain OM952_15185 PF00072 Response regulator receiver domain OM952_15185 PF00512 His Kinase A (phospho-acceptor) domain OM952_15185 PF01627 Hpt domain OM952_15185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM952_15190 PF04264 YceI-like domain OM952_15210 PF03313 Serine dehydratase alpha chain OM952_15210 PF03315 Serine dehydratase beta chain OM952_15215 PF00553 Cellulose binding domain OM952_15215 PF00041 Fibronectin type III domain OM952_15215 PF00704 Glycosyl hydrolases family 18 OM952_15220 PF00742 Homoserine dehydrogenase OM952_15220 PF03447 Homoserine dehydrogenase, NAD binding domain OM952_15220 PF00696 Amino acid kinase family OM952_15225 PF01053 Cys/Met metabolism PLP-dependent enzyme OM952_15230 PF00561 alpha/beta hydrolase fold OM952_15235 PF01551 Peptidase family M23 OM952_15235 PF08525 Opacity-associated protein A N-terminal motif OM952_15235 PF01476 LysM domain OM952_15240 PF16658 Class II release factor RF3, C-terminal domain OM952_15240 PF00009 Elongation factor Tu GTP binding domain OM952_15245 PF03006 Haemolysin-III related OM952_15250 PF05170 AsmA family OM952_15255 PF00571 CBS domain OM952_15255 PF00478 IMP dehydrogenase / GMP reductase domain OM952_15260 PF00535 Glycosyl transferase family 2 OM952_15265 PF00912 Transglycosylase OM952_15270 PF01430 Hsp33 protein OM952_15280 PF07715 TonB-dependent Receptor Plug Domain OM952_15280 PF00593 TonB dependent receptor OM952_15285 PF00440 Bacterial regulatory proteins, tetR family OM952_15295 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OM952_15295 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OM952_15295 PF09317 Domain of unknown function (DUF1974) OM952_15320 PF00872 Transposase, Mutator family OM952_15345 PF01597 Glycine cleavage H-protein OM952_15350 PF08669 Glycine cleavage T-protein C-terminal barrel domain OM952_15350 PF01571 Aminomethyltransferase folate-binding domain OM952_15360 PF16200 C-terminal region of band_7 OM952_15360 PF01145 SPFH domain / Band 7 family OM952_15365 PF02694 Uncharacterised BCR, YnfA/UPF0060 family OM952_15370 PF03819 MazG nucleotide pyrophosphohydrolase domain OM952_15375 PF00459 Inositol monophosphatase family OM952_15380 PF00293 NUDIX domain OM952_15385 PF00202 Aminotransferase class-III OM952_15390 PF04452 RNA methyltransferase OM952_15395 PF02685 Glucokinase OM952_15420 PF00704 Glycosyl hydrolases family 18 OM952_15420 PF01476 LysM domain OM952_15425 PF00728 Glycosyl hydrolase family 20, catalytic domain OM952_15425 PF02838 Glycosyl hydrolase family 20, domain 2 OM952_15425 PF07691 PA14 domain OM952_15435 PF14310 Fibronectin type III-like domain OM952_15435 PF07691 PA14 domain OM952_15435 PF01915 Glycosyl hydrolase family 3 C-terminal domain OM952_15435 PF00933 Glycosyl hydrolase family 3 N terminal domain OM952_15460 PF01301 Glycosyl hydrolases family 35 OM952_15490 PF03932 CutC family OM952_15495 PF01112 Asparaginase OM952_15505 PF13302 Acetyltransferase (GNAT) domain OM952_15520 PF01627 Hpt domain OM952_15520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM952_15520 PF00072 Response regulator receiver domain OM952_15520 PF01584 CheW-like domain OM952_15520 PF02895 Signal transducing histidine kinase, homodimeric domain OM952_15525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM952_15525 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term OM952_15530 PF01584 CheW-like domain OM952_15535 PF00072 Response regulator receiver domain OM952_15540 PF00072 Response regulator receiver domain OM952_15545 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain OM952_15545 PF02951 Prokaryotic glutathione synthetase, N-terminal domain OM952_15555 PF03747 ADP-ribosylglycohydrolase OM952_15560 PF00814 Glycoprotease family OM952_15565 PF13307 Helicase C-terminal domain OM952_15565 PF04851 Type III restriction enzyme, res subunit OM952_15575 PF00912 Transglycosylase OM952_15575 PF00905 Penicillin binding protein transpeptidase domain OM952_15575 PF14814 Bifunctional transglycosylase second domain OM952_15580 PF00535 Glycosyl transferase family 2 OM952_15590 PF04607 Region found in RelA / SpoT proteins OM952_15590 PF13291 ACT domain OM952_15590 PF02824 TGS domain OM952_15600 PF12706 Beta-lactamase superfamily domain OM952_15605 PF03070 TENA/THI-4/PQQC family OM952_15610 PF05402 Coenzyme PQQ synthesis protein D (PqqD) OM952_15615 PF04055 Radical SAM superfamily OM952_15615 PF13186 Iron-sulfur cluster-binding domain OM952_15630 PF02685 Glucokinase OM952_15640 PF00872 Transposase, Mutator family OM952_15650 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold OM952_15650 PF04408 Helicase associated domain (HA2) OM952_15650 PF00270 DEAD/DEAH box helicase OM952_15650 PF00271 Helicase conserved C-terminal domain OM952_15650 PF11898 Domain of unknown function (DUF3418) OM952_15655 PF00210 Ferritin-like domain OM952_15660 PF00270 DEAD/DEAH box helicase OM952_15660 PF00271 Helicase conserved C-terminal domain OM952_15660 PF00570 HRDC domain OM952_15660 PF16124 RecQ zinc-binding OM952_15660 PF09382 RQC domain OM952_15695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM952_15695 PF02203 Tar ligand binding domain homologue OM952_15695 PF00672 HAMP domain OM952_15700 PF01810 LysE type translocator OM952_15705 PF03466 LysR substrate binding domain OM952_15705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM952_15715 PF07536 HWE histidine kinase OM952_15715 PF13581 Histidine kinase-like ATPase domain OM952_15715 PF13426 PAS domain OM952_15720 PF06508 Queuosine biosynthesis protein QueC OM952_15730 PF04055 Radical SAM superfamily OM952_15740 PF00691 OmpA family OM952_15745 PF04052 TolB amino-terminal domain OM952_15745 PF07676 WD40-like Beta Propeller Repeat OM952_15755 PF02472 Biopolymer transport protein ExbD/TolR OM952_15760 PF01618 MotA/TolQ/ExbB proton channel family OM952_15765 PF03061 Thioesterase superfamily OM952_15770 PF05491 RuvB C-terminal winged helix domain OM952_15770 PF05496 Holliday junction DNA helicase RuvB P-loop domain OM952_15770 PF17864 RuvB AAA lid domain OM952_15780 PF02705 K+ potassium transporter OM952_15785 PF01330 RuvA N terminal domain OM952_15785 PF07499 RuvA, C-terminal domain OM952_15790 PF02075 Crossover junction endodeoxyribonuclease RuvC OM952_15795 PF01709 Transcriptional regulator OM952_15810 PF02938 GAD domain OM952_15810 PF00152 tRNA synthetases class II (D, K and N) OM952_15810 PF01336 OB-fold nucleic acid binding domain OM952_15825 PF07690 Major Facilitator Superfamily OM952_15835 PF04185 Phosphoesterase family OM952_15835 PF05506 Domain of unknown function (DUF756) OM952_15845 PF07859 alpha/beta hydrolase fold OM952_15845 PF13472 GDSL-like Lipase/Acylhydrolase family OM952_15855 PF03466 LysR substrate binding domain OM952_15855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM952_15865 PF00005 ABC transporter OM952_15865 PF12848 ABC transporter OM952_15870 PF07715 TonB-dependent Receptor Plug Domain OM952_15870 PF00593 TonB dependent receptor OM952_15880 PF07715 TonB-dependent Receptor Plug Domain OM952_15880 PF00593 TonB dependent receptor OM952_15885 PF00593 TonB dependent receptor OM952_15885 PF07715 TonB-dependent Receptor Plug Domain OM952_15930 PF07715 TonB-dependent Receptor Plug Domain OM952_15930 PF07660 Secretin and TonB N terminus short domain OM952_15930 PF00593 TonB dependent receptor OM952_15940 PF06276 Ferric iron reductase FhuF-like transporter OM952_15940 PF04183 IucA / IucC family OM952_15945 PF07690 Major Facilitator Superfamily OM952_15950 PF04183 IucA / IucC family OM952_15950 PF06276 Ferric iron reductase FhuF-like transporter OM952_15955 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain OM952_15955 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain OM952_15975 PF02654 Cobalamin-5-phosphate synthase OM952_15985 PF02277 Phosphoribosyltransferase OM952_15990 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase OM952_15995 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain OM952_15995 PF07685 CobB/CobQ-like glutamine amidotransferase domain OM952_16000 PF00155 Aminotransferase class I and II OM952_16005 PF17113 Regulatory signalling modulator protein AmpE OM952_16005 PF03186 CobD/Cbib protein OM952_16010 PF12557 Cob(I)alamin adenosyltransferase N terminal OM952_16010 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP OM952_16030 PF00593 TonB dependent receptor OM952_16030 PF07715 TonB-dependent Receptor Plug Domain OM952_16040 PF02861 Clp amino terminal domain, pathogenicity island component OM952_16040 PF17871 AAA lid domain OM952_16040 PF10431 C-terminal, D2-small domain, of ClpB protein OM952_16040 PF00004 ATPase family associated with various cellular activities (AAA) OM952_16040 PF07724 AAA domain (Cdc48 subfamily) OM952_16045 PF01541 GIY-YIG catalytic domain OM952_16080 PF07715 TonB-dependent Receptor Plug Domain OM952_16080 PF00593 TonB dependent receptor OM952_16085 PF02358 Trehalose-phosphatase OM952_16090 PF00723 Glycosyl hydrolases family 15 OM952_16095 PF00982 Glycosyltransferase family 20 OM952_16100 PF01011 PQQ enzyme repeat OM952_16110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM952_16110 PF00672 HAMP domain OM952_16110 PF02203 Tar ligand binding domain homologue OM952_16115 PF04134 Protein of unknown function, DUF393 OM952_16125 PF02578 Multi-copper polyphenol oxidoreductase laccase OM952_16130 PF00849 RNA pseudouridylate synthase OM952_16135 PF13525 Outer membrane lipoprotein OM952_16145 PF00795 Carbon-nitrogen hydrolase OM952_16145 PF02540 NAD synthase OM952_16160 PF02629 CoA binding domain OM952_16160 PF00549 CoA-ligase OM952_16165 PF00549 CoA-ligase OM952_16165 PF08442 ATP-grasp domain OM952_16170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM952_16170 PF00512 His Kinase A (phospho-acceptor) domain OM952_16175 PF02954 Bacterial regulatory protein, Fis family OM952_16175 PF00072 Response regulator receiver domain OM952_16175 PF00158 Sigma-54 interaction domain OM952_16185 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain OM952_16185 PF00437 Type II/IV secretion system protein OM952_16190 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain OM952_16190 PF00437 Type II/IV secretion system protein OM952_16205 PF00114 Pilin (bacterial filament) OM952_16205 PF07963 Prokaryotic N-terminal methylation motif OM952_16210 PF00872 Transposase, Mutator family OM952_16215 PF00482 Type II secretion system (T2SS), protein F OM952_16220 PF01478 Type IV leader peptidase family OM952_16220 PF06750 Bacterial Peptidase A24 N-terminal domain OM952_16225 PF01121 Dephospho-CoA kinase OM952_16245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM952_16245 PF00512 His Kinase A (phospho-acceptor) domain OM952_16245 PF00989 PAS fold OM952_16245 PF11808 Phosphate regulon sensor protein PhoR OM952_16250 PF00072 Response regulator receiver domain OM952_16250 PF00486 Transcriptional regulatory protein, C terminal OM952_16260 PF08443 RimK-like ATP-grasp domain OM952_16260 PF18030 RimK PreATP-grasp domain OM952_16265 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) OM952_16265 PF00128 Alpha amylase, catalytic domain OM952_16290 PF13276 HTH-like domain OM952_16290 PF00665 Integrase core domain OM952_16290 PF13333 Integrase core domain OM952_16305 PF04002 RadC-like JAB domain OM952_16330 PF00872 Transposase, Mutator family OM952_16390 PF18273 Type III R-M EcoP15I C-terminal domain OM952_16390 PF01555 DNA methylase OM952_16410 PF04002 RadC-like JAB domain OM952_16470 PF00657 GDSL-like Lipase/Acylhydrolase OM952_16470 PF03797 Autotransporter beta-domain OM952_16480 PF05690 Thiazole biosynthesis protein ThiG OM952_16485 PF02390 Putative methyltransferase OM952_16490 PF03600 Citrate transporter OM952_16490 PF02080 TrkA-C domain OM952_16510 PF01557 Fumarylacetoacetate (FAA) hydrolase family OM952_16515 PF01741 Large-conductance mechanosensitive channel, MscL OM952_16525 PF00356 Bacterial regulatory proteins, lacI family OM952_16535 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain OM952_16535 PF02837 Glycosyl hydrolases family 2, sugar binding domain OM952_16535 PF00703 Glycosyl hydrolases family 2 OM952_16540 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation OM952_16540 PF14508 Glycosyl-hydrolase 97 N-terminal OM952_16540 PF10566 Glycoside hydrolase 97 OM952_16545 PF00135 Carboxylesterase family OM952_16550 PF00588 SpoU rRNA Methylase family OM952_16550 PF08032 RNA 2'-O ribose methyltransferase substrate binding OM952_16560 PF11838 ERAP1-like C-terminal domain OM952_16560 PF01433 Peptidase family M1 domain OM952_16565 PF00873 AcrB/AcrD/AcrF family OM952_16570 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OM952_16570 PF00529 HlyD membrane-fusion protein of T1SS OM952_16575 PF00009 Elongation factor Tu GTP binding domain OM952_16585 PF00175 Oxidoreductase NAD-binding domain OM952_16585 PF00667 FAD binding domain OM952_16585 PF00258 Flavodoxin OM952_16590 PF01077 Nitrite and sulphite reductase 4Fe-4S domain OM952_16590 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain OM952_16595 PF01507 Phosphoadenosine phosphosulfate reductase family OM952_16615 PF00072 Response regulator receiver domain OM952_16615 PF01627 Hpt domain OM952_16615 PF00512 His Kinase A (phospho-acceptor) domain OM952_16615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM952_16625 PF03466 LysR substrate binding domain OM952_16625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM952_16630 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases OM952_16630 PF14824 Sirohaem biosynthesis protein central OM952_16630 PF10414 Sirohaem synthase dimerisation region OM952_16635 PF00291 Pyridoxal-phosphate dependent enzyme OM952_16645 PF01661 Macro domain OM952_16650 PF00274 Fructose-bisphosphate aldolase class-I OM952_16655 PF02887 Pyruvate kinase, alpha/beta domain OM952_16655 PF00224 Pyruvate kinase, barrel domain OM952_16660 PF13419 Haloacid dehalogenase-like hydrolase OM952_16665 PF00162 Phosphoglycerate kinase OM952_16695 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain OM952_16695 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain OM952_16705 PF03922 OmpW family OM952_16720 PF04273 Putative phosphatase (DUF442) OM952_16720 PF00753 Metallo-beta-lactamase superfamily OM952_16730 PF00528 Binding-protein-dependent transport system inner membrane component OM952_16735 PF00005 ABC transporter OM952_16735 PF03459 TOBE domain OM952_16755 PF08521 Two-component sensor kinase N-terminal OM952_16755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM952_16755 PF00512 His Kinase A (phospho-acceptor) domain OM952_16760 PF00486 Transcriptional regulatory protein, C terminal OM952_16760 PF00072 Response regulator receiver domain OM952_16780 PF00501 AMP-binding enzyme OM952_16805 PF01476 LysM domain OM952_16805 PF03734 L,D-transpeptidase catalytic domain OM952_16810 PF04225 Opacity-associated protein A LysM-like domain OM952_16810 PF01551 Peptidase family M23 OM952_16815 PF07715 TonB-dependent Receptor Plug Domain OM952_16815 PF00593 TonB dependent receptor OM952_16830 PF02779 Transketolase, pyrimidine binding domain OM952_16830 PF02780 Transketolase, C-terminal domain OM952_16830 PF00456 Transketolase, thiamine diphosphate binding domain OM952_16835 PF00375 Sodium:dicarboxylate symporter family OM952_16845 PF07584 Aerotolerance regulator N-terminal OM952_16845 PF00092 von Willebrand factor type A domain OM952_16865 PF07726 ATPase family associated with various cellular activities (AAA) OM952_16865 PF17863 AAA lid domain OM952_16870 PF03958 Bacterial type II/III secretion system short domain OM952_16870 PF07660 Secretin and TonB N terminus short domain OM952_16870 PF11741 AMIN domain OM952_16870 PF00263 Bacterial type II and III secretion system protein OM952_16875 PF04351 Pilus assembly protein, PilP OM952_16880 PF04350 Pilus assembly protein, PilO OM952_16885 PF05137 Fimbrial assembly protein (PilN) OM952_16890 PF11104 Type IV pilus assembly protein PilM; OM952_16895 PF17092 Penicillin-binding protein OB-like domain OM952_16895 PF00912 Transglycosylase OM952_16895 PF00905 Penicillin binding protein transpeptidase domain OM952_16905 PF00285 Citrate synthase, C-terminal domain OM952_16910 PF01197 Ribosomal protein L31 OM952_16915 PF01156 Inosine-uridine preferring nucleoside hydrolase OM952_16920 PF00270 DEAD/DEAH box helicase OM952_16920 PF17191 RecG wedge domain OM952_16920 PF00271 Helicase conserved C-terminal domain OM952_16925 PF01042 Endoribonuclease L-PSP OM952_16930 PF13291 ACT domain OM952_16930 PF04607 Region found in RelA / SpoT proteins OM952_16930 PF02824 TGS domain OM952_16935 PF01192 RNA polymerase Rpb6 OM952_16940 PF00625 Guanylate kinase OM952_16945 PF08340 Domain of unknown function (DUF1732) OM952_16945 PF03755 YicC-like family, N-terminal region OM952_16950 PF03725 3' exoribonuclease family, domain 2 OM952_16950 PF01138 3' exoribonuclease family, domain 1 OM952_16960 PF01725 Ham1 family OM952_16965 PF06969 HemN C-terminal domain OM952_16965 PF04055 Radical SAM superfamily OM952_16980 PF00557 Metallopeptidase family M24 OM952_16990 PF05195 Aminopeptidase P, N-terminal domain OM952_16990 PF00557 Metallopeptidase family M24 OM952_16995 PF03695 Uncharacterised protein family (UPF0149) OM952_17005 PF05164 Cell division protein ZapA OM952_17015 PF01812 5-formyltetrahydrofolate cyclo-ligase family OM952_17025 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) OM952_17035 PF13369 Transglutaminase-like superfamily OM952_17040 PF00301 Rubredoxin OM952_17045 PF02581 Thiamine monophosphate synthase OM952_17065 PF00202 Aminotransferase class-III OM952_17070 PF00196 Bacterial regulatory proteins, luxR family OM952_17070 PF17874 MalT-like TPR region OM952_17075 PF00127 Copper binding proteins, plastocyanin/azurin family OM952_17080 PF00155 Aminotransferase class I and II OM952_17090 PF13442 Cytochrome C oxidase, cbb3-type, subunit III OM952_17090 PF00034 Cytochrome c OM952_17095 PF01593 Flavin containing amine oxidoreductase OM952_17110 PF00202 Aminotransferase class-III OM952_17115 PF00027 Cyclic nucleotide-binding domain OM952_17115 PF00520 Ion transport protein OM952_17130 PF01569 PAP2 superfamily OM952_17140 PF01062 Bestrophin, RFP-TM, chloride channel OM952_17150 PF01225 Mur ligase family, catalytic domain OM952_17150 PF02875 Mur ligase family, glutamate ligase domain OM952_17150 PF08245 Mur ligase middle domain OM952_17160 PF00365 Phosphofructokinase OM952_17170 PF03030 Inorganic H+ pyrophosphatase OM952_17180 PF00719 Inorganic pyrophosphatase OM952_17190 PF00593 TonB dependent receptor OM952_17190 PF07715 TonB-dependent Receptor Plug Domain OM952_17195 PF12833 Helix-turn-helix domain OM952_17200 PF00486 Transcriptional regulatory protein, C terminal OM952_17200 PF18500 CadC C-terminal domain 1 OM952_17205 PF13667 ThiC-associated domain OM952_17205 PF01964 Radical SAM ThiC family OM952_17210 PF07715 TonB-dependent Receptor Plug Domain OM952_17210 PF00593 TonB dependent receptor OM952_17215 PF00672 HAMP domain OM952_17215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain OM952_17215 PF02203 Tar ligand binding domain homologue OM952_17225 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain OM952_17225 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain OM952_17230 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain OM952_17230 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain OM952_17230 PF00205 Thiamine pyrophosphate enzyme, central domain OM952_17240 PF00291 Pyridoxal-phosphate dependent enzyme OM952_17245 PF08502 LeuA allosteric (dimerisation) domain OM952_17245 PF00682 HMGL-like OM952_17250 PF00180 Isocitrate/isopropylmalate dehydrogenase OM952_17255 PF00694 Aconitase C-terminal domain OM952_17260 PF00330 Aconitase family (aconitate hydratase) OM952_17265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM952_17285 PF02321 Outer membrane efflux protein OM952_17290 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) OM952_17295 PF03279 Bacterial lipid A biosynthesis acyltransferase OM952_17320 PF03949 Malic enzyme, NAD binding domain OM952_17320 PF01515 Phosphate acetyl/butaryl transferase OM952_17320 PF00390 Malic enzyme, N-terminal domain OM952_17325 PF00375 Sodium:dicarboxylate symporter family OM952_17335 PF02743 Cache domain OM952_17335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM952_17335 PF00512 His Kinase A (phospho-acceptor) domain OM952_17340 PF07690 Major Facilitator Superfamily OM952_17350 PF03466 LysR substrate binding domain OM952_17350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM952_17355 PF00248 Aldo/keto reductase family OM952_17370 PF00072 Response regulator receiver domain OM952_17370 PF00196 Bacterial regulatory proteins, luxR family OM952_17380 PF08521 Two-component sensor kinase N-terminal OM952_17380 PF00512 His Kinase A (phospho-acceptor) domain OM952_17380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM952_17385 PF00072 Response regulator receiver domain OM952_17385 PF00486 Transcriptional regulatory protein, C terminal OM952_17395 PF03600 Citrate transporter OM952_17400 PF00106 short chain dehydrogenase OM952_17405 PF00356 Bacterial regulatory proteins, lacI family OM952_17420 PF00128 Alpha amylase, catalytic domain OM952_17435 PF03193 RsgA GTPase OM952_17440 PF00155 Aminotransferase class I and II OM952_17455 PF01522 Polysaccharide deacetylase OM952_17460 PF00462 Glutaredoxin OM952_17475 PF01979 Amidohydrolase family OM952_17480 PF01979 Amidohydrolase family OM952_17505 PF00872 Transposase, Mutator family OM952_17515 PF02645 Uncharacterised protein, DegV family COG1307 OM952_17530 PF13333 Integrase core domain OM952_17530 PF00665 Integrase core domain OM952_17530 PF13276 HTH-like domain OM952_17535 PF00756 Putative esterase OM952_17540 PF04828 Glutathione-dependent formaldehyde-activating enzyme OM952_17545 PF08240 Alcohol dehydrogenase GroES-like domain OM952_17545 PF00107 Zinc-binding dehydrogenase OM952_17550 PF02583 Metal-sensitive transcriptional repressor OM952_17565 PF00072 Response regulator receiver domain OM952_17565 PF00486 Transcriptional regulatory protein, C terminal OM952_17570 PF00512 His Kinase A (phospho-acceptor) domain OM952_17570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM952_17570 PF00672 HAMP domain OM952_17575 PF04107 Glutamate-cysteine ligase family 2(GCS2) OM952_17585 PF01926 50S ribosome-binding GTPase OM952_17590 PF00034 Cytochrome c OM952_17600 PF01323 DSBA-like thioredoxin domain OM952_17610 PF02028 BCCT, betaine/carnitine/choline family transporter OM952_17615 PF00171 Aldehyde dehydrogenase family OM952_17620 PF05199 GMC oxidoreductase OM952_17620 PF00732 GMC oxidoreductase OM952_17625 PF00544 Pectate lyase OM952_17645 PF01066 CDP-alcohol phosphatidyltransferase OM952_17655 PF03129 Anticodon binding domain OM952_17655 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) OM952_17655 PF04073 Aminoacyl-tRNA editing domain OM952_17660 PF00816 H-NS histone family OM952_17670 PF02405 Permease MlaE OM952_17675 PF00005 ABC transporter OM952_17680 PF03886 ABC-type transport auxiliary lipoprotein component OM952_17680 PF02470 MlaD protein OM952_17700 PF01144 Coenzyme A transferase OM952_17705 PF01144 Coenzyme A transferase OM952_17710 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III OM952_17710 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II OM952_17710 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain OM952_17710 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I OM952_17715 PF01050 Mannose-6-phosphate isomerase OM952_17715 PF00483 Nucleotidyl transferase OM952_17720 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain OM952_17720 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain OM952_17720 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain OM952_17725 PF04321 RmlD substrate binding domain OM952_17730 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase OM952_17735 PF00483 Nucleotidyl transferase OM952_17740 PF16363 GDP-mannose 4,6 dehydratase OM952_17745 PF01012 Electron transfer flavoprotein domain OM952_17750 PF01012 Electron transfer flavoprotein domain OM952_17750 PF00766 Electron transfer flavoprotein FAD-binding domain OM952_17760 PF01040 UbiA prenyltransferase family OM952_17765 PF04030 D-arabinono-1,4-lactone oxidase OM952_17765 PF01565 FAD binding domain OM952_17770 PF00106 short chain dehydrogenase OM952_17775 PF01370 NAD dependent epimerase/dehydratase family OM952_17780 PF01593 Flavin containing amine oxidoreductase OM952_17810 PF16363 GDP-mannose 4,6 dehydratase OM952_17815 PF00534 Glycosyl transferases group 1 OM952_17815 PF13477 Glycosyl transferase 4-like OM952_17820 PF00069 Protein kinase domain OM952_17820 PF13847 Methyltransferase domain OM952_17825 PF00005 ABC transporter OM952_17835 PF13439 Glycosyltransferase Family 4 OM952_17835 PF00534 Glycosyl transferases group 1 OM952_17840 PF01053 Cys/Met metabolism PLP-dependent enzyme OM952_17845 PF00571 CBS domain OM952_17845 PF00291 Pyridoxal-phosphate dependent enzyme OM952_17865 PF00437 Type II/IV secretion system protein OM952_17870 PF14497 Glutathione S-transferase, C-terminal domain OM952_17870 PF02798 Glutathione S-transferase, N-terminal domain OM952_17880 PF00271 Helicase conserved C-terminal domain OM952_17880 PF00270 DEAD/DEAH box helicase OM952_17885 PF01242 6-pyruvoyl tetrahydropterin synthase OM952_17905 PF13185 GAF domain OM952_17915 PF13419 Haloacid dehalogenase-like hydrolase OM952_17920 PF00817 impB/mucB/samB family OM952_17920 PF11799 impB/mucB/samB family C-terminal domain OM952_17925 PF07977 FabA-like domain OM952_17930 PF00109 Beta-ketoacyl synthase, N-terminal domain OM952_17930 PF02801 Beta-ketoacyl synthase, C-terminal domain OM952_17935 PF08239 Bacterial SH3 domain OM952_17945 PF01432 Peptidase family M3 OM952_17960 PF07732 Multicopper oxidase OM952_17960 PF07731 Multicopper oxidase OM952_17960 PF00394 Multicopper oxidase OM952_17965 PF05275 Copper resistance protein B precursor (CopB) OM952_17970 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily OM952_17995 PF01380 SIS domain OM952_18000 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OM952_18005 PF00005 ABC transporter OM952_18010 PF12704 MacB-like periplasmic core domain OM952_18010 PF00005 ABC transporter OM952_18010 PF02687 FtsX-like permease family OM952_18015 PF00005 ABC transporter OM952_18015 PF02687 FtsX-like permease family OM952_18015 PF12704 MacB-like periplasmic core domain OM952_18025 PF00072 Response regulator receiver domain OM952_18025 PF00158 Sigma-54 interaction domain OM952_18025 PF02954 Bacterial regulatory protein, Fis family OM952_18030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM952_18030 PF00512 His Kinase A (phospho-acceptor) domain OM952_18035 PF12804 MobA-like NTP transferase domain OM952_18035 PF00132 Bacterial transferase hexapeptide (six repeats) OM952_18035 PF14602 Hexapeptide repeat of succinyl-transferase OM952_18055 PF01817 Chorismate mutase type II OM952_18060 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain OM952_18060 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain OM952_18065 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain OM952_18065 PF02874 ATP synthase alpha/beta family, beta-barrel domain OM952_18070 PF00231 ATP synthase OM952_18075 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain OM952_18075 PF00306 ATP synthase alpha/beta chain, C terminal domain OM952_18075 PF02874 ATP synthase alpha/beta family, beta-barrel domain OM952_18080 PF00213 ATP synthase delta (OSCP) subunit OM952_18085 PF00430 ATP synthase B/B' CF(0) OM952_18090 PF00137 ATP synthase subunit C OM952_18095 PF00119 ATP synthase A chain OM952_18115 PF07992 Pyridine nucleotide-disulphide oxidoreductase OM952_18115 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain OM952_18125 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) OM952_18125 PF00364 Biotin-requiring enzyme OM952_18125 PF02817 e3 binding domain OM952_18155 PF03180 NLPA lipoprotein OM952_18160 PF00528 Binding-protein-dependent transport system inner membrane component OM952_18165 PF00005 ABC transporter OM952_18165 PF09383 NIL domain OM952_18170 PF00892 EamA-like transporter family OM952_18175 PF04461 Protein of unknown function (DUF520) OM952_18185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM952_18185 PF00512 His Kinase A (phospho-acceptor) domain OM952_18185 PF18415 Histidine kinase receptor ArcB trans-membrane domain OM952_18185 PF01627 Hpt domain OM952_18185 PF00989 PAS fold OM952_18185 PF00072 Response regulator receiver domain OM952_18210 PF13419 Haloacid dehalogenase-like hydrolase OM952_18215 PF01479 S4 domain OM952_18215 PF00849 RNA pseudouridylate synthase OM952_18220 PF05175 Methyltransferase small domain OM952_18220 PF08468 Methyltransferase small domain N-terminal OM952_18235 PF05598 Transposase domain (DUF772) OM952_18235 PF01609 Transposase DDE domain OM952_18240 PF00872 Transposase, Mutator family OM952_18245 PF07995 Glucose / Sorbosone dehydrogenase OM952_18255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM952_18255 PF00512 His Kinase A (phospho-acceptor) domain OM952_18255 PF00989 PAS fold OM952_18275 PF00842 Alanine racemase, C-terminal domain OM952_18275 PF01168 Alanine racemase, N-terminal domain OM952_18280 PF01266 FAD dependent oxidoreductase OM952_18285 PF01037 Lrp/AsnC ligand binding domain OM952_18295 PF01641 SelR domain OM952_18305 PF01618 MotA/TolQ/ExbB proton channel family OM952_18310 PF13677 Membrane MotB of proton-channel complex MotA/MotB OM952_18310 PF00691 OmpA family OM952_18335 PF01061 ABC-2 type transporter OM952_18340 PF00005 ABC transporter OM952_18345 PF00999 Sodium/hydrogen exchanger family OM952_18350 PF02469 Fasciclin domain OM952_18355 PF03167 Uracil DNA glycosylase superfamily OM952_18365 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase OM952_18375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM952_18375 PF03466 LysR substrate binding domain OM952_18380 PF03358 NADPH-dependent FMN reductase OM952_18385 PF00248 Aldo/keto reductase family OM952_18400 PF05649 Peptidase family M13 OM952_18400 PF01431 Peptidase family M13 OM952_18415 PF13520 Amino acid permease OM952_18425 PF04397 LytTr DNA-binding domain OM952_18425 PF00072 Response regulator receiver domain OM952_18430 PF02743 Cache domain OM952_18430 PF00672 HAMP domain OM952_18430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM952_18430 PF06580 Histidine kinase OM952_18445 PF05974 Domain of unknown function (DUF892) OM952_18450 PF05067 Manganese containing catalase OM952_18470 PF08448 PAS fold OM952_18470 PF03705 CheR methyltransferase, all-alpha domain OM952_18470 PF01739 CheR methyltransferase, SAM binding domain OM952_18470 PF01339 CheB methylesterase OM952_18485 PF00072 Response regulator receiver domain OM952_18485 PF00158 Sigma-54 interaction domain OM952_18485 PF02954 Bacterial regulatory protein, Fis family OM952_18500 PF01654 Cytochrome bd terminal oxidase subunit I OM952_18505 PF02322 Cytochrome bd terminal oxidase subunit II OM952_18540 PF08240 Alcohol dehydrogenase GroES-like domain OM952_18540 PF13823 Alcohol dehydrogenase GroES-associated OM952_18540 PF00107 Zinc-binding dehydrogenase OM952_18550 PF00872 Transposase, Mutator family OM952_18605 PF00005 ABC transporter OM952_18615 PF03466 LysR substrate binding domain OM952_18615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM952_18620 PF01042 Endoribonuclease L-PSP OM952_18650 PF01740 STAS domain OM952_18650 PF00916 Sulfate permease family OM952_18655 PF00654 Voltage gated chloride channel OM952_18665 PF00557 Metallopeptidase family M24 OM952_18675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM952_18675 PF03466 LysR substrate binding domain OM952_18700 PF04545 Sigma-70, region 4 OM952_18700 PF00140 Sigma-70 factor, region 1.2 OM952_18700 PF03979 Sigma-70 factor, region 1.1 OM952_18700 PF04546 Sigma-70, non-essential region OM952_18700 PF04542 Sigma-70 region 2 OM952_18700 PF04539 Sigma-70 region 3 OM952_18705 PF02580 D-Tyr-tRNA(Tyr) deacylase OM952_18710 PF03279 Bacterial lipid A biosynthesis acyltransferase OM952_18720 PF00925 GTP cyclohydrolase II OM952_18740 PF00535 Glycosyl transferase family 2 OM952_18755 PF01189 16S rRNA methyltransferase RsmB/F OM952_18755 PF01029 NusB family OM952_18760 PF00551 Formyl transferase OM952_18760 PF02911 Formyl transferase, C-terminal domain OM952_18765 PF01327 Polypeptide deformylase OM952_18770 PF01476 LysM domain OM952_18775 PF17782 DprA winged helix domain OM952_18775 PF02481 DNA recombination-mediator protein A OM952_18780 PF04361 Protein of unknown function (DUF494) OM952_18785 PF07963 Prokaryotic N-terminal methylation motif OM952_18785 PF00114 Pilin (bacterial filament) OM952_18795 PF01131 DNA topoisomerase OM952_18795 PF01751 Toprim domain OM952_18795 PF13368 Topoisomerase C-terminal repeat OM952_18800 PF01300 Telomere recombination OM952_18825 PF01343 Peptidase family S49 OM952_18830 PF01554 MatE OM952_18850 PF18319 PriA DNA helicase Cys-rich region (CRR) domain OM952_18850 PF18074 Primosomal protein N C-terminal domain OM952_18850 PF17764 3′ DNA-binding domain (3′BD) OM952_18850 PF00271 Helicase conserved C-terminal domain OM952_18850 PF00270 DEAD/DEAH box helicase OM952_18855 PF13417 Glutathione S-transferase, N-terminal domain OM952_18855 PF00043 Glutathione S-transferase, C-terminal domain OM952_18875 PF03458 UPF0126 domain OM952_18880 PF04542 Sigma-70 region 2 OM952_18880 PF04545 Sigma-70, region 4 OM952_18885 PF03167 Uracil DNA glycosylase superfamily OM952_18890 PF01339 CheB methylesterase OM952_18890 PF00072 Response regulator receiver domain OM952_18895 PF18075 FtsX extracellular domain OM952_18900 PF00005 ABC transporter OM952_18905 PF00270 DEAD/DEAH box helicase OM952_18905 PF00271 Helicase conserved C-terminal domain OM952_18905 PF12300 ATP-dependent RNA helicase RhlB OM952_18910 PF00085 Thioredoxin OM952_18915 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain OM952_18915 PF07497 Rho termination factor, RNA-binding domain OM952_18915 PF07498 Rho termination factor, N-terminal domain OM952_18925 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) OM952_18940 PF03971 Monomeric isocitrate dehydrogenase OM952_18950 PF01476 LysM domain OM952_18950 PF04972 BON domain OM952_18955 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term OM952_18955 PF14489 QueF-like protein OM952_18960 PF07687 Peptidase dimerisation domain OM952_18960 PF01546 Peptidase family M20/M25/M40 OM952_18965 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OM952_18970 PF00873 AcrB/AcrD/AcrF family OM952_18975 PF00873 AcrB/AcrD/AcrF family OM952_18990 PF07063 Domain of unknown function (DUF1338) OM952_19030 PF01427 D-ala-D-ala dipeptidase OM952_19035 PF01510 N-acetylmuramoyl-L-alanine amidase OM952_19055 PF13520 Amino acid permease OM952_19075 PF00872 Transposase, Mutator family OM952_19085 PF07995 Glucose / Sorbosone dehydrogenase OM952_19090 PF14310 Fibronectin type III-like domain OM952_19090 PF00933 Glycosyl hydrolase family 3 N terminal domain OM952_19090 PF01915 Glycosyl hydrolase family 3 C-terminal domain OM952_19095 PF02152 Dihydroneopterin aldolase OM952_19100 PF00814 Glycoprotease family OM952_19110 PF01165 Ribosomal protein S21 OM952_19115 PF09424 Yqey-like protein OM952_19120 PF03631 Virulence factor BrkB OM952_19125 PF08278 DNA primase DnaG DnaB-binding OM952_19125 PF08275 DNA primase catalytic core, N-terminal domain OM952_19125 PF01807 CHC2 zinc finger OM952_19125 PF10410 DnaB-helicase binding domain of primase OM952_19130 PF13593 SBF-like CPA transporter family (DUF4137) OM952_19140 PF01040 UbiA prenyltransferase family OM952_19165 PF00510 Cytochrome c oxidase subunit III OM952_19170 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 OM952_19180 PF00115 Cytochrome C and Quinol oxidase polypeptide I OM952_19185 PF02790 Cytochrome C oxidase subunit II, transmembrane domain OM952_19185 PF00116 Cytochrome C oxidase subunit II, periplasmic domain OM952_19225 PF00579 tRNA synthetases class I (W and Y) OM952_19230 PF01551 Peptidase family M23 OM952_19230 PF04225 Opacity-associated protein A LysM-like domain OM952_19235 PF03702 Anhydro-N-acetylmuramic acid kinase OM952_19245 PF07690 Major Facilitator Superfamily OM952_19250 PF03372 Endonuclease/Exonuclease/phosphatase family OM952_19255 PF00156 Phosphoribosyl transferase domain OM952_19265 PF13614 AAA domain OM952_19270 PF17762 HTH domain found in ParB protein OM952_19270 PF02195 ParB-like nuclease domain OM952_19280 PF01370 NAD dependent epimerase/dehydratase family OM952_19285 PF00535 Glycosyl transferase family 2 OM952_19300 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I OM952_19300 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II OM952_19300 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III OM952_19300 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain OM952_19305 PF00692 dUTPase OM952_19310 PF04127 DNA / pantothenate metabolism flavoprotein OM952_19310 PF02441 Flavoprotein OM952_19315 PF04002 RadC-like JAB domain OM952_19320 PF03485 Arginyl tRNA synthetase N terminal domain OM952_19320 PF05746 DALR anticodon binding domain OM952_19320 PF00750 tRNA synthetases class I (R) OM952_19335 PF00106 short chain dehydrogenase OM952_19340 PF01757 Acyltransferase family OM952_19345 PF03033 Glycosyltransferase family 28 N-terminal domain OM952_19365 PF17810 Arginine decarboxylase helical bundle domain OM952_19365 PF17944 Arginine decarboxylase C-terminal helical extension OM952_19365 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain OM952_19370 PF17284 Spermidine synthase tetramerisation domain OM952_19390 PF00963 Cohesin domain OM952_19390 PF00754 F5/8 type C domain OM952_19390 PF00041 Fibronectin type III domain OM952_19390 PF02838 Glycosyl hydrolase family 20, domain 2 OM952_19390 PF07555 beta-N-acetylglucosaminidase OM952_19395 PF00543 Nitrogen regulatory protein P-II OM952_19400 PF04380 Membrane fusogenic activity OM952_19405 PF13335 Magnesium chelatase, subunit ChlI C-terminal OM952_19405 PF01078 Magnesium chelatase, subunit ChlI OM952_19420 PF12792 CSS motif domain associated with EAL OM952_19420 PF00563 EAL domain OM952_19425 PF00487 Fatty acid desaturase OM952_19430 PF00970 Oxidoreductase FAD-binding domain OM952_19430 PF00111 2Fe-2S iron-sulfur cluster binding domain OM952_19430 PF00175 Oxidoreductase NAD-binding domain OM952_19435 PF00440 Bacterial regulatory proteins, tetR family OM952_19445 PF01139 tRNA-splicing ligase RtcB OM952_19485 PF08338 Domain of unknown function (DUF1731) OM952_19485 PF01370 NAD dependent epimerase/dehydratase family OM952_19490 PF00486 Transcriptional regulatory protein, C terminal OM952_19490 PF00072 Response regulator receiver domain OM952_19495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM952_19495 PF08521 Two-component sensor kinase N-terminal OM952_19495 PF00512 His Kinase A (phospho-acceptor) domain OM952_19515 PF00595 PDZ domain OM952_19535 PF01594 AI-2E family transporter OM952_19540 PF13419 Haloacid dehalogenase-like hydrolase OM952_19545 PF02789 Cytosol aminopeptidase family, N-terminal domain OM952_19545 PF00883 Cytosol aminopeptidase family, catalytic domain OM952_19555 PF08281 Sigma-70, region 4 OM952_19555 PF04542 Sigma-70 region 2 OM952_19560 PF00199 Catalase OM952_19575 PF00072 Response regulator receiver domain OM952_19575 PF00196 Bacterial regulatory proteins, luxR family OM952_19580 PF07730 Histidine kinase OM952_19585 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OM952_19590 PF00005 ABC transporter OM952_19615 PF00892 EamA-like transporter family OM952_19640 PF00753 Metallo-beta-lactamase superfamily OM952_19645 PF00579 tRNA synthetases class I (W and Y) OM952_19650 PF05532 CsbD-like OM952_19665 PF00491 Arginase family OM952_19690 PF02223 Thymidylate kinase OM952_19705 PF03309 Type III pantothenate kinase OM952_19710 PF02237 Biotin protein ligase C terminal domain OM952_19710 PF03099 Biotin/lipoate A/B protein ligase family OM952_19710 PF08279 HTH domain OM952_19720 PF06167 Glucose-regulated metallo-peptidase M90 OM952_19735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM952_19740 PF00072 Response regulator receiver domain OM952_19740 PF00486 Transcriptional regulatory protein, C terminal OM952_19750 PF01207 Dihydrouridine synthase (Dus) OM952_19770 PF00199 Catalase OM952_19770 PF06628 Catalase-related immune-responsive OM952_19795 PF00872 Transposase, Mutator family OM952_19805 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OM952_19805 PF00529 HlyD membrane-fusion protein of T1SS OM952_19810 PF13307 Helicase C-terminal domain OM952_19810 PF06733 DEAD_2 OM952_19825 PF01488 Shikimate / quinate 5-dehydrogenase OM952_19825 PF08501 Shikimate dehydrogenase substrate binding domain OM952_19825 PF18317 Shikimate 5'-dehydrogenase C-terminal domain OM952_19835 PF00667 FAD binding domain OM952_19835 PF00175 Oxidoreductase NAD-binding domain OM952_19835 PF00258 Flavodoxin OM952_19845 PF00490 Delta-aminolevulinic acid dehydratase OM952_19870 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region OM952_19870 PF00326 Prolyl oligopeptidase family OM952_19900 PF04820 Tryptophan halogenase OM952_19915 PF00005 ABC transporter OM952_19925 PF01381 Helix-turn-helix OM952_19935 PF01229 Glycosyl hydrolases family 39 OM952_19940 PF02583 Metal-sensitive transcriptional repressor OM952_19945 PF01545 Cation efflux family OM952_19950 PF00970 Oxidoreductase FAD-binding domain OM952_19950 PF00175 Oxidoreductase NAD-binding domain OM952_19950 PF00111 2Fe-2S iron-sulfur cluster binding domain OM952_19955 PF00005 ABC transporter OM952_19960 PF01061 ABC-2 type transporter OM952_19965 PF08546 Ketopantoate reductase PanE/ApbA C terminal OM952_19965 PF02558 Ketopantoate reductase PanE/ApbA OM952_19990 PF00085 Thioredoxin OM952_20010 PF00268 Ribonucleotide reductase, small chain OM952_20015 PF00317 Ribonucleotide reductase, all-alpha domain OM952_20015 PF03477 ATP cone domain OM952_20015 PF02867 Ribonucleotide reductase, barrel domain OM952_20030 PF00583 Acetyltransferase (GNAT) family OM952_20030 PF13380 CoA binding domain OM952_20030 PF13607 Succinyl-CoA ligase like flavodoxin domain OM952_20035 PF00571 CBS domain OM952_20035 PF01769 Divalent cation transporter OM952_20035 PF03448 MgtE intracellular N domain OM952_20040 PF00194 Eukaryotic-type carbonic anhydrase OM952_20045 PF00999 Sodium/hydrogen exchanger family OM952_20045 PF02254 TrkA-N domain OM952_20055 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain OM952_20055 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain OM952_20060 PF00723 Glycosyl hydrolases family 15 OM952_20075 PF05166 YcgL domain OM952_20080 PF00109 Beta-ketoacyl synthase, N-terminal domain OM952_20080 PF02801 Beta-ketoacyl synthase, C-terminal domain OM952_20090 PF00535 Glycosyl transferase family 2 OM952_20145 PF01553 Acyltransferase OM952_20155 PF00550 Phosphopantetheine attachment site OM952_20160 PF04820 Tryptophan halogenase OM952_20190 PF01218 Coproporphyrinogen III oxidase OM952_20205 PF06812 ImpA, N-terminal, type VI secretion system OM952_20225 PF00069 Protein kinase domain OM952_20250 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE OM952_20255 PF00248 Aldo/keto reductase family OM952_20260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM952_20260 PF03466 LysR substrate binding domain OM952_20275 PF04717 Type VI secretion system, phage-baseplate injector OM952_20305 PF04542 Sigma-70 region 2 OM952_20305 PF08281 Sigma-70, region 4 OM952_20325 PF03372 Endonuclease/Exonuclease/phosphatase family OM952_20335 PF01425 Amidase OM952_20360 PF00872 Transposase, Mutator family OM952_20380 PF10431 C-terminal, D2-small domain, of ClpB protein OM952_20380 PF17871 AAA lid domain OM952_20380 PF07724 AAA domain (Cdc48 subfamily) OM952_20380 PF00004 ATPase family associated with various cellular activities (AAA) OM952_20390 PF05947 Type VI secretion system, TssF OM952_20395 PF04965 Gene 25-like lysozyme OM952_20400 PF07024 ImpE protein OM952_20405 PF05638 Type VI secretion system effector, Hcp OM952_20410 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath OM952_20415 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 OM952_20430 PF14602 Hexapeptide repeat of succinyl-transferase OM952_20430 PF12464 Maltose acetyltransferase OM952_20440 PF00580 UvrD/REP helicase N-terminal domain OM952_20440 PF13361 UvrD-like helicase C-terminal domain OM952_20455 PF13396 Phospholipase_D-nuclease N-terminal OM952_20455 PF13091 PLD-like domain OM952_20460 PF03466 LysR substrate binding domain OM952_20460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM952_20465 PF03737 Aldolase/RraA OM952_20470 PF04303 PrpF protein OM952_20475 PF04909 Amidohydrolase OM952_20480 PF00471 Ribosomal protein L33 OM952_20485 PF00830 Ribosomal L28 family OM952_20500 PF13533 Biotin-lipoyl like OM952_20520 PF02527 rRNA small subunit methyltransferase G OM952_20525 PF09423 PhoD-like phosphatase OM952_20525 PF16655 PhoD-like phosphatase, N-terminal domain OM952_20530 PF09423 PhoD-like phosphatase OM952_20530 PF16655 PhoD-like phosphatase, N-terminal domain OM952_20535 PF01648 4'-phosphopantetheinyl transferase superfamily OM952_20540 PF04226 Transglycosylase associated protein OM952_20550 PF03372 Endonuclease/Exonuclease/phosphatase family OM952_20555 PF00480 ROK family OM952_20575 PF00474 Sodium:solute symporter family OM952_20580 PF04341 Protein of unknown function, DUF485 OM952_20590 PF16177 Acetyl-coenzyme A synthetase N-terminus OM952_20590 PF00501 AMP-binding enzyme OM952_20590 PF13193 AMP-binding enzyme C-terminal domain OM952_20595 PF00196 Bacterial regulatory proteins, luxR family OM952_20595 PF00072 Response regulator receiver domain OM952_20625 PF04616 Glycosyl hydrolases family 43 OM952_20625 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain OM952_20635 PF00248 Aldo/keto reductase family OM952_20650 PF01557 Fumarylacetoacetate (FAA) hydrolase family OM952_20655 PF13378 Enolase C-terminal domain-like OM952_20655 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain OM952_20660 PF05336 L-rhamnose mutarotase OM952_20665 PF07690 Major Facilitator Superfamily OM952_20670 PF09339 IclR helix-turn-helix domain OM952_20670 PF01614 Bacterial transcriptional regulator OM952_20675 PF02311 AraC-like ligand binding domain OM952_20675 PF12833 Helix-turn-helix domain OM952_20685 PF02659 Putative manganese efflux pump OM952_20690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM952_20690 PF00512 His Kinase A (phospho-acceptor) domain OM952_20700 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain OM952_20700 PF06165 Glycosyltransferase family 36 OM952_20715 PF01011 PQQ enzyme repeat OM952_20715 PF13360 PQQ-like domain OM952_20715 PF13570 PQQ-like domain OM952_20735 PF04357 TamB, inner membrane protein subunit of TAM complex OM952_20740 PF01103 Surface antigen OM952_20740 PF17243 POTRA domain TamA domain 1 OM952_20745 PF07715 TonB-dependent Receptor Plug Domain OM952_20745 PF00593 TonB dependent receptor OM952_20750 PF13181 Tetratricopeptide repeat OM952_20755 PF05746 DALR anticodon binding domain OM952_20755 PF02092 Glycyl-tRNA synthetase beta subunit OM952_20760 PF02091 Glycyl-tRNA synthetase alpha subunit OM952_20765 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain OM952_20765 PF00437 Type II/IV secretion system protein OM952_20780 PF00117 Glutamine amidotransferase class-I OM952_20780 PF00958 GMP synthase C terminal domain OM952_20795 PF00902 Sec-independent protein translocase protein (TatC) OM952_20800 PF02416 mttA/Hcf106 family OM952_20805 PF02416 mttA/Hcf106 family OM952_20815 PF00762 Ferrochelatase OM952_20820 PF12697 Alpha/beta hydrolase family OM952_20835 PF04381 Putative exonuclease, RdgC OM952_20840 PF01171 PP-loop family OM952_20850 PF00356 Bacterial regulatory proteins, lacI family OM952_20855 PF07488 Glycosyl hydrolase family 67 middle domain OM952_20855 PF07477 Glycosyl hydrolase family 67 C-terminus OM952_20855 PF03648 Glycosyl hydrolase family 67 N-terminus OM952_20865 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain OM952_20865 PF13378 Enolase C-terminal domain-like OM952_20870 PF04616 Glycosyl hydrolases family 43 OM952_20870 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain OM952_20875 PF07691 PA14 domain OM952_20875 PF00933 Glycosyl hydrolase family 3 N terminal domain OM952_20875 PF01915 Glycosyl hydrolase family 3 C-terminal domain OM952_20875 PF14310 Fibronectin type III-like domain OM952_20880 PF01232 Mannitol dehydrogenase Rossmann domain OM952_20880 PF08125 Mannitol dehydrogenase C-terminal domain OM952_20920 PF00171 Aldehyde dehydrogenase family OM952_20935 PF00202 Aminotransferase class-III OM952_20945 PF02782 FGGY family of carbohydrate kinases, C-terminal domain OM952_20945 PF00370 FGGY family of carbohydrate kinases, N-terminal domain OM952_20960 PF08450 SMP-30/Gluconolactonase/LRE-like region OM952_20965 PF00331 Glycosyl hydrolase family 10 OM952_20970 PF02837 Glycosyl hydrolases family 2, sugar binding domain OM952_20970 PF02836 Glycosyl hydrolases family 2, TIM barrel domain OM952_20970 PF00703 Glycosyl hydrolases family 2 OM952_20970 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 OM952_20970 PF16355 Domain of unknown function (DUF4982) OM952_20975 PF02614 Glucuronate isomerase OM952_20980 PF00553 Cellulose binding domain OM952_20980 PF03422 Carbohydrate binding module (family 6) OM952_20980 PF00331 Glycosyl hydrolase family 10 OM952_20995 PF00331 Glycosyl hydrolase family 10 OM952_20995 PF03422 Carbohydrate binding module (family 6) OM952_20995 PF00553 Cellulose binding domain OM952_21015 PF04616 Glycosyl hydrolases family 43 OM952_21080 PF00107 Zinc-binding dehydrogenase OM952_21080 PF16197 Ketoacyl-synthetase C-terminal extension OM952_21080 PF00698 Acyl transferase domain OM952_21080 PF02801 Beta-ketoacyl synthase, C-terminal domain OM952_21080 PF08659 KR domain OM952_21080 PF14765 Polyketide synthase dehydratase OM952_21080 PF08240 Alcohol dehydrogenase GroES-like domain OM952_21080 PF00109 Beta-ketoacyl synthase, N-terminal domain OM952_21080 PF00550 Phosphopantetheine attachment site OM952_21090 PF01553 Acyltransferase OM952_21100 PF00356 Bacterial regulatory proteins, lacI family OM952_21115 PF04820 Tryptophan halogenase OM952_21120 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family OM952_21125 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) OM952_21130 PF04337 Protein of unknown function, DUF480 OM952_21140 PF04055 Radical SAM superfamily OM952_21140 PF06969 HemN C-terminal domain OM952_21190 PF00580 UvrD/REP helicase N-terminal domain OM952_21190 PF13361 UvrD-like helicase C-terminal domain OM952_21195 PF00265 Thymidine kinase OM952_21200 PF01590 GAF domain OM952_21200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OM952_21200 PF00512 His Kinase A (phospho-acceptor) domain OM952_21200 PF08446 PAS fold OM952_21200 PF00360 Phytochrome region OM952_21205 PF04349 Periplasmic glucan biosynthesis protein, MdoG OM952_21215 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain OM952_21215 PF06827 Zinc finger found in FPG and IleRS OM952_21215 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain OM952_21245 PF03594 Benzoate membrane transport protein OM952_21250 PF01590 GAF domain OM952_21250 PF08446 PAS fold OM952_21250 PF13426 PAS domain OM952_21250 PF00360 Phytochrome region OM952_21255 PF01126 Heme oxygenase OM952_21260 PF07690 Major Facilitator Superfamily OM952_21270 PF01263 Aldose 1-epimerase OM952_21280 PF02810 SEC-C motif OM952_21320 PF00872 Transposase, Mutator family OM952_21335 PF01925 Sulfite exporter TauE/SafE OM952_21345 PF00872 Transposase, Mutator family OM952_21370 PF01227 GTP cyclohydrolase I OM952_21380 PF07869 Protein of unknown function (DUF1656) OM952_21385 PF00529 HlyD membrane-fusion protein of T1SS OM952_21385 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion OM952_21390 PF02321 Outer membrane efflux protein OM952_21395 PF04632 Fusaric acid resistance protein family OM952_21400 PF00083 Sugar (and other) transporter OM952_21410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM952_21410 PF03466 LysR substrate binding domain OM952_21415 PF00106 short chain dehydrogenase OM952_21425 PF13091 PLD-like domain OM952_21425 PF13396 Phospholipase_D-nuclease N-terminal OM952_21450 PF00872 Transposase, Mutator family OM952_21475 PF00849 RNA pseudouridylate synthase OM952_21510 PF07929 Plasmid pRiA4b ORF-3-like protein OM952_21515 PF06511 Type III secretion systems tip complex components OM952_21560 PF07720 Tetratricopeptide repeat OM952_21565 PF01312 FlhB HrpN YscU SpaS Family OM952_21570 PF01311 Bacterial export proteins, family 1 OM952_21575 PF01313 Bacterial export proteins, family 3 OM952_21580 PF00813 FliP family OM952_21600 PF18269 T3SS EscN ATPase C-terminal domain OM952_21600 PF02874 ATP synthase alpha/beta family, beta-barrel domain OM952_21600 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain OM952_21610 PF00771 FHIPEP family OM952_21615 PF07201 HrpJ-like domain OM952_21620 PF03958 Bacterial type II/III secretion system short domain OM952_21620 PF00263 Bacterial type II and III secretion system protein OM952_21635 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF OM952_21645 PF01514 Secretory protein of YscJ/FliF family OM952_21700 PF00872 Transposase, Mutator family OM952_21740 PF00872 Transposase, Mutator family OM952_21755 PF01609 Transposase DDE domain OM952_21755 PF05598 Transposase domain (DUF772) OM952_21760 PF00872 Transposase, Mutator family OM952_21770 PF06834 TraU protein OM952_21795 PF13276 HTH-like domain OM952_21795 PF00665 Integrase core domain OM952_21795 PF13333 Integrase core domain OM952_21865 PF02785 Biotin carboxylase C-terminal domain OM952_21865 PF00289 Biotin carboxylase, N-terminal domain OM952_21865 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain OM952_21870 PF01425 Amidase OM952_21930 PF01381 Helix-turn-helix OM952_21945 PF13538 UvrD-like helicase C-terminal domain OM952_21950 PF12705 PD-(D/E)XK nuclease superfamily OM952_21950 PF00580 UvrD/REP helicase N-terminal domain OM952_21950 PF13361 UvrD-like helicase C-terminal domain OM952_21955 PF17946 RecC C-terminal domain OM952_21990 PF00005 ABC transporter OM952_21995 PF02405 Permease MlaE OM952_22000 PF02470 MlaD protein OM952_22005 PF05494 MlaC protein OM952_22015 PF04333 MlaA lipoprotein OM952_22025 PF00255 Glutathione peroxidase OM952_22035 PF02646 RmuC family OM952_22040 PF00107 Zinc-binding dehydrogenase OM952_22040 PF08240 Alcohol dehydrogenase GroES-like domain OM952_22045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OM952_22045 PF03466 LysR substrate binding domain OM952_22065 PF13520 Amino acid permease OM952_22070 PF17678 Glycosyl hydrolase family 92 N-terminal domain OM952_22070 PF07971 Glycosyl hydrolase family 92 OM952_22085 PF10947 Protein of unknown function (DUF2628) OM952_22090 PF00990 Diguanylate cyclase, GGDEF domain OM952_22095 PF17853 GGDEF-like domain OM952_22095 PF13556 PucR C-terminal helix-turn-helix domain OM952_22095 PF05651 Putative sugar diacid recognition OM952_22100 PF02595 Glycerate kinase family OM952_22120 PF17785 PUA-like domain OM952_22120 PF10672 S-adenosylmethionine-dependent methyltransferase OM952_22125 PF03741 Integral membrane protein TerC family OM952_22130 PF01694 Rhomboid family OM952_22135 PF03009 Glycerophosphoryl diester phosphodiesterase family OM952_22145 PF01569 PAP2 superfamily OM952_22150 PF10396 GTP-binding protein TrmE N-terminus OM952_22150 PF01926 50S ribosome-binding GTPase OM952_22150 PF12631 MnmE helical domain OM952_22155 PF01522 Polysaccharide deacetylase OM952_22165 PF02096 60Kd inner membrane protein OM952_22165 PF14849 YidC periplasmic domain OM952_22170 PF00825 Ribonuclease P OM952_22175 PF00468 Ribosomal protein L34 OM952_22185 PF01131 DNA topoisomerase OM952_22185 PF01751 Toprim domain OM952_22185 PF13368 Topoisomerase C-terminal repeat OM952_22185 PF01396 Topoisomerase DNA binding C4 zinc finger OM952_22200 PF01850 PIN domain OM952_22210 PF02796 Helix-turn-helix domain of resolvase OM952_22210 PF00239 Resolvase, N terminal domain OM952_22250 PF00872 Transposase, Mutator family OM952_22305 PF06616 BsuBI/PstI restriction endonuclease domain OM952_22305 PF17728 BsuBI/PstI restriction endonuclease HTH domain OM952_22310 PF07669 Eco57I restriction-modification methylase OM952_22310 PF12950 TaqI-like C-terminal specificity domain OM952_22405 PF02534 Type IV secretory system Conjugative DNA transfer OM952_22445 PF00437 Type II/IV secretion system protein OM952_22460 PF03135 CagE, TrbE, VirB family, component of type IV transporter system OM952_22485 PF04610 TrbL/VirB6 plasmid conjugal transfer protein OM952_22500 PF03743 Bacterial conjugation TrbI-like protein OM952_22520 PF01751 Toprim domain OM952_22520 PF01131 DNA topoisomerase OM952_22550 PF00156 Phosphoribosyl transferase domain OM952_22570 PF01850 PIN domain OM952_22580 PF02796 Helix-turn-helix domain of resolvase OM952_22580 PF00239 Resolvase, N terminal domain OM952_22610 PF11740 Plasmid replication region DNA-binding N-term OM952_22630 PF03377 TAL effector repeat OM952_22645 PF06067 Domain of unknown function (DUF932) OM952_22675 PF18495 Antitoxin VbhA OM952_22685 PF17841 BID domain of Bartonella effector protein (Bep) OM952_22685 PF02661 Fic/DOC family OM952_22695 PF01609 Transposase DDE domain OM952_22695 PF05598 Transposase domain (DUF772) OM952_22715 PF03230 Antirestriction protein OM952_22755 PF18340 DNA relaxase TraI 2B/2B-like domain OM952_22755 PF07057 DNA helicase TraI OM952_22755 PF18272 single-stranded DNA binding TraI N-terminal subdomain OM952_22755 PF08751 TrwC relaxase OM952_22755 PF18340 DNA relaxase TraI 2B/2B-like domain OM952_22755 PF07057 DNA helicase TraI OM952_22755 PF18272 single-stranded DNA binding TraI N-terminal subdomain OM952_22755 PF08751 TrwC relaxase