locus-tag class description AC609_00005 PF11638 DnaA N-terminal domain AC609_00005 PF00308 Bacterial dnaA protein AC609_00005 PF08299 Bacterial dnaA protein helix-turn-helix AC609_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain AC609_00010 PF02767 DNA polymerase III beta subunit, central domain AC609_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain AC609_00015 PF02463 RecF/RecN/SMC N terminal domain AC609_00020 PF00204 DNA gyrase B AC609_00020 PF00986 DNA gyrase B subunit, carboxyl terminus AC609_00020 PF18053 DNA gyrase B subunit insert domain AC609_00020 PF01751 Toprim domain AC609_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC609_00030 PF01435 Peptidase family M48 AC609_00040 PF03544 Gram-negative bacterial TonB protein C-terminal AC609_00045 PF01618 MotA/TolQ/ExbB proton channel family AC609_00050 PF02472 Biopolymer transport protein ExbD/TolR AC609_00055 PF02472 Biopolymer transport protein ExbD/TolR AC609_00080 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AC609_00105 PF04055 Radical SAM superfamily AC609_00115 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AC609_00130 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AC609_00130 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AC609_00135 PF03572 Peptidase family S41 AC609_00135 PF13180 PDZ domain AC609_00140 PF01551 Peptidase family M23 AC609_00150 PF04389 Peptidase family M28 AC609_00160 PF00150 Cellulase (glycosyl hydrolase family 5) AC609_00165 PF00150 Cellulase (glycosyl hydrolase family 5) AC609_00175 PF00150 Cellulase (glycosyl hydrolase family 5) AC609_00180 PF08240 Alcohol dehydrogenase GroES-like domain AC609_00180 PF00107 Zinc-binding dehydrogenase AC609_00190 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC609_00190 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AC609_00195 PF01645 Conserved region in glutamate synthase AC609_00195 PF04898 Glutamate synthase central domain AC609_00195 PF00310 Glutamine amidotransferases class-II AC609_00195 PF01493 GXGXG motif AC609_00220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC609_00220 PF03466 LysR substrate binding domain AC609_00280 PF00270 DEAD/DEAH box helicase AC609_00280 PF00271 Helicase conserved C-terminal domain AC609_00280 PF09369 Domain of unknown function (DUF1998) AC609_00285 PF03006 Haemolysin-III related AC609_00295 PF00106 short chain dehydrogenase AC609_00305 PF03466 LysR substrate binding domain AC609_00305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC609_00330 PF02525 Flavodoxin-like fold AC609_00335 PF01527 Transposase AC609_00340 PF01609 Transposase DDE domain AC609_00340 PF05598 Transposase domain (DUF772) AC609_00350 PF01609 Transposase DDE domain AC609_00350 PF05598 Transposase domain (DUF772) AC609_00365 PF05532 CsbD-like AC609_00390 PF16485 Protealysin propeptide AC609_00390 PF01447 Thermolysin metallopeptidase, catalytic domain AC609_00390 PF02868 Thermolysin metallopeptidase, alpha-helical domain AC609_00400 PF13344 Haloacid dehalogenase-like hydrolase AC609_00400 PF00293 NUDIX domain AC609_00415 PF00085 Thioredoxin AC609_00420 PF08946 Osmosensory transporter coiled coil AC609_00420 PF00083 Sugar (and other) transporter AC609_00460 PF17863 AAA lid domain AC609_00460 PF07726 ATPase family associated with various cellular activities (AAA) AC609_00500 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AC609_00505 PF00155 Aminotransferase class I and II AC609_00510 PF00593 TonB dependent receptor AC609_00510 PF07715 TonB-dependent Receptor Plug Domain AC609_00530 PF02735 Ku70/Ku80 beta-barrel domain AC609_00535 PF01070 FMN-dependent dehydrogenase AC609_00540 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family AC609_00545 PF07730 Histidine kinase AC609_00550 PF00196 Bacterial regulatory proteins, luxR family AC609_00550 PF00072 Response regulator receiver domain AC609_00575 PF12241 Trans-2-enoyl-CoA reductase catalytic region AC609_00575 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase AC609_00575 PF07055 Enoyl reductase FAD binding domain AC609_00580 PF05598 Transposase domain (DUF772) AC609_00580 PF01609 Transposase DDE domain AC609_00600 PF00128 Alpha amylase, catalytic domain AC609_00600 PF11896 Domain of unknown function (DUF3416) AC609_00605 PF00128 Alpha amylase, catalytic domain AC609_00605 PF16657 Maltogenic Amylase, C-terminal domain AC609_00610 PF02806 Alpha amylase, C-terminal all-beta domain AC609_00610 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AC609_00610 PF00128 Alpha amylase, catalytic domain AC609_00620 PF00248 Aldo/keto reductase family AC609_00625 PF00135 Carboxylesterase family AC609_00630 PF07859 alpha/beta hydrolase fold AC609_00630 PF13472 GDSL-like Lipase/Acylhydrolase family AC609_00640 PF03480 Bacterial extracellular solute-binding protein, family 7 AC609_00650 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AC609_00655 PF04616 Glycosyl hydrolases family 43 AC609_00655 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain AC609_00660 PF00356 Bacterial regulatory proteins, lacI family AC609_00665 PF04962 KduI/IolB family AC609_00680 PF00657 GDSL-like Lipase/Acylhydrolase AC609_00690 PF00351 Biopterin-dependent aromatic amino acid hydroxylase AC609_00695 PF01037 Lrp/AsnC ligand binding domain AC609_00700 PF00593 TonB dependent receptor AC609_00700 PF07660 Secretin and TonB N terminus short domain AC609_00700 PF07715 TonB-dependent Receptor Plug Domain AC609_00705 PF01734 Patatin-like phospholipase AC609_00715 PF00005 ABC transporter AC609_00730 PF00571 CBS domain AC609_00730 PF00005 ABC transporter AC609_00735 PF00528 Binding-protein-dependent transport system inner membrane component AC609_00745 PF12867 DinB superfamily AC609_00745 PF03781 Sulfatase-modifying factor enzyme 1 AC609_00775 PF10609 NUBPL iron-transfer P-loop NTPase AC609_00775 PF01883 Iron-sulfur cluster assembly protein AC609_00790 PF13091 PLD-like domain AC609_00795 PF03061 Thioesterase superfamily AC609_00820 PF00107 Zinc-binding dehydrogenase AC609_00820 PF08240 Alcohol dehydrogenase GroES-like domain AC609_00830 PF02673 Bacitracin resistance protein BacA AC609_00835 PF00120 Glutamine synthetase, catalytic domain AC609_00835 PF03951 Glutamine synthetase, beta-Grasp domain AC609_00840 PF00543 Nitrogen regulatory protein P-II AC609_00845 PF00909 Ammonium Transporter Family AC609_00850 PF00512 His Kinase A (phospho-acceptor) domain AC609_00850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC609_00850 PF00989 PAS fold AC609_00855 PF00158 Sigma-54 interaction domain AC609_00855 PF02954 Bacterial regulatory protein, Fis family AC609_00855 PF00072 Response regulator receiver domain AC609_00860 PF00080 Copper/zinc superoxide dismutase (SODC) AC609_00865 PF00080 Copper/zinc superoxide dismutase (SODC) AC609_00880 PF02803 Thiolase, C-terminal domain AC609_00880 PF00108 Thiolase, N-terminal domain AC609_00915 PF00581 Rhodanese-like domain AC609_00920 PF02556 Preprotein translocase subunit SecB AC609_00925 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AC609_00925 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AC609_00955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC609_00960 PF00158 Sigma-54 interaction domain AC609_00960 PF00072 Response regulator receiver domain AC609_00960 PF02954 Bacterial regulatory protein, Fis family AC609_00975 PF07690 Major Facilitator Superfamily AC609_00980 PF00588 SpoU rRNA Methylase family AC609_00995 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AC609_00995 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AC609_01000 PF13784 Fic/DOC family N-terminal AC609_01000 PF02661 Fic/DOC family AC609_01005 PF00561 alpha/beta hydrolase fold AC609_01010 PF03692 Putative zinc- or iron-chelating domain AC609_01015 PF00501 AMP-binding enzyme AC609_01020 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family AC609_01040 PF07478 D-ala D-ala ligase C-terminus AC609_01040 PF01820 D-ala D-ala ligase N-terminus AC609_01050 PF03109 ABC1 family AC609_01060 PF00849 RNA pseudouridylate synthase AC609_01070 PF00472 RF-1 domain AC609_01080 PF01112 Asparaginase AC609_01085 PF01432 Peptidase family M3 AC609_01090 PF12706 Beta-lactamase superfamily domain AC609_01110 PF12833 Helix-turn-helix domain AC609_01115 PF00999 Sodium/hydrogen exchanger family AC609_01125 PF01274 Malate synthase AC609_01130 PF00463 Isocitrate lyase family AC609_01135 PF00990 Diguanylate cyclase, GGDEF domain AC609_01150 PF05598 Transposase domain (DUF772) AC609_01150 PF01609 Transposase DDE domain AC609_01160 PF00326 Prolyl oligopeptidase family AC609_01165 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AC609_01165 PF02785 Biotin carboxylase C-terminal domain AC609_01165 PF00364 Biotin-requiring enzyme AC609_01165 PF00289 Biotin carboxylase, N-terminal domain AC609_01170 PF01039 Carboxyl transferase domain AC609_01175 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AC609_01175 PF02770 Acyl-CoA dehydrogenase, middle domain AC609_01175 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC609_01230 PF02492 CobW/HypB/UreG, nucleotide-binding domain AC609_01230 PF07683 Cobalamin synthesis protein cobW C-terminal domain AC609_01255 PF03969 AFG1-like ATPase AC609_01260 PF01047 MarR family AC609_01265 PF02566 OsmC-like protein AC609_01285 PF16884 N-terminal domain of oxidoreductase AC609_01285 PF00107 Zinc-binding dehydrogenase AC609_01300 PF00849 RNA pseudouridylate synthase AC609_01310 PF08482 ATP-dependent helicase C-terminal AC609_01310 PF00271 Helicase conserved C-terminal domain AC609_01310 PF00270 DEAD/DEAH box helicase AC609_01310 PF04408 Helicase associated domain (HA2) AC609_01315 PF07308 Protein of unknown function (DUF1456) AC609_01320 PF00576 HIUase/Transthyretin family AC609_01325 PF13454 FAD-NAD(P)-binding AC609_01330 PF09349 OHCU decarboxylase AC609_01330 PF01014 Uricase AC609_01345 PF00266 Aminotransferase class-V AC609_01350 PF01546 Peptidase family M20/M25/M40 AC609_01350 PF07687 Peptidase dimerisation domain AC609_01355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC609_01355 PF03466 LysR substrate binding domain AC609_01360 PF00561 alpha/beta hydrolase fold AC609_01375 PF01425 Amidase AC609_01380 PF01156 Inosine-uridine preferring nucleoside hydrolase AC609_01390 PF00860 Permease family AC609_01400 PF00111 2Fe-2S iron-sulfur cluster binding domain AC609_01405 PF00355 Rieske [2Fe-2S] domain AC609_01410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC609_01410 PF03466 LysR substrate binding domain AC609_01415 PF01026 TatD related DNase AC609_01430 PF03466 LysR substrate binding domain AC609_01430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC609_01435 PF07690 Major Facilitator Superfamily AC609_01445 PF00561 alpha/beta hydrolase fold AC609_01450 PF02146 Sir2 family AC609_01455 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AC609_01460 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AC609_01460 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AC609_01470 PF00551 Formyl transferase AC609_01475 PF00072 Response regulator receiver domain AC609_01475 PF00486 Transcriptional regulatory protein, C terminal AC609_01480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC609_01480 PF00512 His Kinase A (phospho-acceptor) domain AC609_01480 PF00672 HAMP domain AC609_01485 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AC609_01485 PF00529 HlyD membrane-fusion protein of T1SS AC609_01490 PF00873 AcrB/AcrD/AcrF family AC609_01495 PF02321 Outer membrane efflux protein AC609_01495 PF08139 Prokaryotic membrane lipoprotein lipid attachment site AC609_01510 PF02677 Epoxyqueuosine reductase QueH AC609_01515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC609_01515 PF03466 LysR substrate binding domain AC609_01520 PF03358 NADPH-dependent FMN reductase AC609_01530 PF08267 Cobalamin-independent synthase, N-terminal domain AC609_01530 PF01717 Cobalamin-independent synthase, Catalytic domain AC609_01535 PF03812 2-keto-3-deoxygluconate permease AC609_01555 PF05368 NmrA-like family AC609_01560 PF01638 HxlR-like helix-turn-helix AC609_01580 PF00872 Transposase, Mutator family AC609_01615 PF01527 Transposase AC609_01620 PF13276 HTH-like domain AC609_01620 PF13683 Integrase core domain AC609_01630 PF00920 Dehydratase family AC609_01650 PF00132 Bacterial transferase hexapeptide (six repeats) AC609_01660 PF07690 Major Facilitator Superfamily AC609_01665 PF11871 Domain of unknown function (DUF3391) AC609_01665 PF01966 HD domain AC609_01685 PF00171 Aldehyde dehydrogenase family AC609_01695 PF01494 FAD binding domain AC609_01705 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AC609_01705 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AC609_01710 PF00230 Major intrinsic protein AC609_01715 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AC609_01715 PF01266 FAD dependent oxidoreductase AC609_01720 PF08220 DeoR-like helix-turn-helix domain AC609_01720 PF00455 DeoR C terminal sensor domain AC609_01730 PF00355 Rieske [2Fe-2S] domain AC609_01735 PF01144 Coenzyme A transferase AC609_01745 PF02803 Thiolase, C-terminal domain AC609_01745 PF00108 Thiolase, N-terminal domain AC609_01750 PF00775 Dioxygenase AC609_01750 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal AC609_01760 PF10397 Adenylosuccinate lyase C-terminus AC609_01760 PF00206 Lyase AC609_01765 PF12146 Serine aminopeptidase, S33 AC609_01770 PF02627 Carboxymuconolactone decarboxylase family AC609_01780 PF01614 Bacterial transcriptional regulator AC609_01780 PF09339 IclR helix-turn-helix domain AC609_01790 PF07859 alpha/beta hydrolase fold AC609_01800 PF13932 GidA associated domain AC609_01800 PF01134 Glucose inhibited division protein A AC609_01810 PF00291 Pyridoxal-phosphate dependent enzyme AC609_01830 PF13649 Methyltransferase domain AC609_01840 PF12697 Alpha/beta hydrolase family AC609_01850 PF00155 Aminotransferase class I and II AC609_01855 PF06968 Biotin and Thiamin Synthesis associated domain AC609_01855 PF04055 Radical SAM superfamily AC609_01865 PF01040 UbiA prenyltransferase family AC609_01880 PF05819 NolX protein AC609_01885 PF05598 Transposase domain (DUF772) AC609_01885 PF01609 Transposase DDE domain AC609_01925 PF01313 Bacterial export proteins, family 3 AC609_01930 PF00813 FliP family AC609_01945 PF00771 FHIPEP family AC609_01950 PF01312 FlhB HrpN YscU SpaS Family AC609_01965 PF01514 Secretory protein of YscJ/FliF family AC609_01980 PF18269 T3SS EscN ATPase C-terminal domain AC609_01980 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AC609_01980 PF02874 ATP synthase alpha/beta family, beta-barrel domain AC609_01990 PF01311 Bacterial export proteins, family 1 AC609_02005 PF01464 Transglycosylase SLT domain AC609_02020 PF00924 Mechanosensitive ion channel AC609_02020 PF12795 Mechanosensitive ion channel porin domain AC609_02020 PF12794 Mechanosensitive ion channel inner membrane domain 1 AC609_02025 PF00884 Sulfatase AC609_02030 PF03109 ABC1 family AC609_02035 PF05661 Protein of unknown function (DUF808) AC609_02040 PF00990 Diguanylate cyclase, GGDEF domain AC609_02040 PF00072 Response regulator receiver domain AC609_02045 PF08323 Starch synthase catalytic domain AC609_02045 PF00534 Glycosyl transferases group 1 AC609_02050 PF00128 Alpha amylase, catalytic domain AC609_02050 PF02806 Alpha amylase, C-terminal all-beta domain AC609_02050 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AC609_02055 PF00128 Alpha amylase, catalytic domain AC609_02055 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AC609_02055 PF11941 Domain of unknown function (DUF3459) AC609_02060 PF02446 4-alpha-glucanotransferase AC609_02065 PF00128 Alpha amylase, catalytic domain AC609_02075 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AC609_02075 PF00128 Alpha amylase, catalytic domain AC609_02080 PF13460 NAD(P)H-binding AC609_02105 PF00872 Transposase, Mutator family AC609_02110 PF01527 Transposase AC609_02115 PF01609 Transposase DDE domain AC609_02115 PF05598 Transposase domain (DUF772) AC609_02135 PF06903 VirK protein AC609_02140 PF02321 Outer membrane efflux protein AC609_02155 PF00873 AcrB/AcrD/AcrF family AC609_02170 PF00270 DEAD/DEAH box helicase AC609_02170 PF00271 Helicase conserved C-terminal domain AC609_02175 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AC609_02175 PF00364 Biotin-requiring enzyme AC609_02185 PF02780 Transketolase, C-terminal domain AC609_02185 PF02779 Transketolase, pyrimidine binding domain AC609_02190 PF00676 Dehydrogenase E1 component AC609_02200 PF03301 Tryptophan 2,3-dioxygenase AC609_02205 PF00854 POT family AC609_02220 PF01047 MarR family AC609_02225 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AC609_02230 PF04209 homogentisate 1,2-dioxygenase AC609_02245 PF03334 Na+/H+ antiporter subunit AC609_02250 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AC609_02260 PF00361 Proton-conducting membrane transporter AC609_02265 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AC609_02270 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AC609_02270 PF13244 Domain of unknown function (DUF4040) AC609_02270 PF00361 Proton-conducting membrane transporter AC609_02270 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AC609_02285 PF01483 Proprotein convertase P-domain AC609_02285 PF01447 Thermolysin metallopeptidase, catalytic domain AC609_02285 PF02868 Thermolysin metallopeptidase, alpha-helical domain AC609_02285 PF07504 Fungalysin/Thermolysin Propeptide Motif AC609_02290 PF00182 Chitinase class I AC609_02310 PF01259 SAICAR synthetase AC609_02315 PF05099 Tellurite resistance protein TerB AC609_02315 PF00226 DnaJ domain AC609_02325 PF00834 Ribulose-phosphate 3 epimerase family AC609_02335 PF00781 Diacylglycerol kinase catalytic domain AC609_02340 PF04715 Anthranilate synthase component I, N terminal region AC609_02340 PF00425 chorismate binding enzyme AC609_02350 PF00117 Glutamine amidotransferase class-I AC609_02360 PF00591 Glycosyl transferase family, a/b domain AC609_02360 PF02885 Glycosyl transferase family, helical bundle domain AC609_02365 PF00218 Indole-3-glycerol phosphate synthase AC609_02375 PF00325 Bacterial regulatory proteins, crp family AC609_02375 PF00027 Cyclic nucleotide-binding domain AC609_02380 PF02675 S-adenosylmethionine decarboxylase AC609_02385 PF00893 Small Multidrug Resistance protein AC609_02390 PF03232 Ubiquinone biosynthesis protein COQ7 AC609_02395 PF00572 Ribosomal protein L13 AC609_02400 PF00380 Ribosomal protein S9/S16 AC609_02415 PF00293 NUDIX domain AC609_02425 PF00210 Ferritin-like domain AC609_02430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC609_02430 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AC609_02430 PF00512 His Kinase A (phospho-acceptor) domain AC609_02430 PF00072 Response regulator receiver domain AC609_02430 PF00672 HAMP domain AC609_02430 PF01627 Hpt domain AC609_02435 PF00486 Transcriptional regulatory protein, C terminal AC609_02435 PF00072 Response regulator receiver domain AC609_02455 PF01521 Iron-sulphur cluster biosynthesis AC609_02465 PF00293 NUDIX domain AC609_02465 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain AC609_02465 PF09297 NADH pyrophosphatase zinc ribbon domain AC609_02470 PF03186 CobD/Cbib protein AC609_02470 PF17113 Regulatory signalling modulator protein AmpE AC609_02485 PF07690 Major Facilitator Superfamily AC609_02495 PF07690 Major Facilitator Superfamily AC609_02500 PF12805 FUSC-like inner membrane protein yccS AC609_02510 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AC609_02510 PF02843 Phosphoribosylglycinamide synthetase, C domain AC609_02510 PF02844 Phosphoribosylglycinamide synthetase, N domain AC609_02520 PF01808 AICARFT/IMPCHase bienzyme AC609_02520 PF02142 MGS-like domain AC609_02525 PF01066 CDP-alcohol phosphatidyltransferase AC609_02530 PF12147 Putative methyltransferase AC609_02530 PF12146 Serine aminopeptidase, S33 AC609_02535 PF00782 Dual specificity phosphatase, catalytic domain AC609_02565 PF02954 Bacterial regulatory protein, Fis family AC609_02580 PF01381 Helix-turn-helix AC609_02605 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AC609_02605 PF00289 Biotin carboxylase, N-terminal domain AC609_02605 PF02785 Biotin carboxylase C-terminal domain AC609_02615 PF00364 Biotin-requiring enzyme AC609_02620 PF01220 Dehydroquinase class II AC609_02630 PF02683 Cytochrome C biogenesis protein transmembrane region AC609_02630 PF11412 Disulphide bond corrector protein DsbC AC609_02635 PF03091 CutA1 divalent ion tolerance protein AC609_02645 PF00166 Chaperonin 10 Kd subunit AC609_02650 PF00118 TCP-1/cpn60 chaperonin family AC609_02660 PF00593 TonB dependent receptor AC609_02660 PF07715 TonB-dependent Receptor Plug Domain AC609_02665 PF07804 HipA-like C-terminal domain AC609_02670 PF00793 DAHP synthetase I family AC609_02690 PF08450 SMP-30/Gluconolactonase/LRE-like region AC609_02700 PF08335 GlnD PII-uridylyltransferase AC609_02700 PF03710 Glutamate-ammonia ligase adenylyltransferase AC609_02705 PF02592 Putative vitamin uptake transporter AC609_02720 PF05598 Transposase domain (DUF772) AC609_02720 PF01609 Transposase DDE domain AC609_02735 PF00881 Nitroreductase family AC609_02740 PF04264 YceI-like domain AC609_02770 PF16957 Malonate decarboxylase, alpha subunit, transporter AC609_02775 PF06857 Malonate decarboxylase delta subunit (MdcD) AC609_02780 PF01039 Carboxyl transferase domain AC609_02790 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG AC609_02795 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AC609_02800 PF00698 Acyl transferase domain AC609_02810 PF07729 FCD domain AC609_02810 PF00392 Bacterial regulatory proteins, gntR family AC609_02850 PF07745 Glycosyl hydrolase family 53 AC609_02855 PF17831 Pyruvate dehydrogenase E1 component middle domain AC609_02855 PF00456 Transketolase, thiamine diphosphate binding domain AC609_02860 PF00872 Transposase, Mutator family AC609_02870 PF00106 short chain dehydrogenase AC609_02895 PF00106 short chain dehydrogenase AC609_02905 PF13409 Glutathione S-transferase, N-terminal domain AC609_02950 PF07759 Protein of unknown function (DUF1615) AC609_02955 PF00990 Diguanylate cyclase, GGDEF domain AC609_02955 PF05230 MASE2 domain AC609_02960 PF02082 Transcriptional regulator AC609_02965 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC609_02985 PF00892 EamA-like transporter family AC609_02990 PF03330 Lytic transglycolase AC609_03000 PF01341 Glycosyl hydrolases family 6 AC609_03000 PF00041 Fibronectin type III domain AC609_03000 PF00553 Cellulose binding domain AC609_03015 PF00324 Amino acid permease AC609_03025 PF01544 CorA-like Mg2+ transporter protein AC609_03035 PF01204 Trehalase AC609_03045 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AC609_03045 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AC609_03075 PF09456 RcsC Alpha-Beta-Loop (ABL) AC609_03075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC609_03075 PF00072 Response regulator receiver domain AC609_03075 PF00512 His Kinase A (phospho-acceptor) domain AC609_03085 PF03797 Autotransporter beta-domain AC609_03090 PF00150 Cellulase (glycosyl hydrolase family 5) AC609_03090 PF00553 Cellulose binding domain AC609_03120 PF13632 Glycosyl transferase family group 2 AC609_03130 PF06580 Histidine kinase AC609_03130 PF07694 5TMR of 5TMR-LYT AC609_03135 PF04397 LytTr DNA-binding domain AC609_03135 PF00072 Response regulator receiver domain AC609_03140 PF03900 Porphobilinogen deaminase, C-terminal domain AC609_03140 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AC609_03175 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AC609_03175 PF00326 Prolyl oligopeptidase family AC609_03185 PF00155 Aminotransferase class I and II AC609_03190 PF00326 Prolyl oligopeptidase family AC609_03190 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AC609_03195 PF04304 Protein of unknown function (DUF454) AC609_03205 PF01678 Diaminopimelate epimerase AC609_03215 PF02899 Phage integrase, N-terminal SAM-like domain AC609_03215 PF00589 Phage integrase family AC609_03220 PF00227 Proteasome subunit AC609_03225 PF10431 C-terminal, D2-small domain, of ClpB protein AC609_03225 PF07724 AAA domain (Cdc48 subfamily) AC609_03225 PF00004 ATPase family associated with various cellular activities (AAA) AC609_03235 PF13673 Acetyltransferase (GNAT) domain AC609_03240 PF13533 Biotin-lipoyl like AC609_03250 PF01209 ubiE/COQ5 methyltransferase family AC609_03255 PF03707 Bacterial signalling protein N terminal repeat AC609_03255 PF00563 EAL domain AC609_03255 PF00990 Diguanylate cyclase, GGDEF domain AC609_03260 PF11838 ERAP1-like C-terminal domain AC609_03260 PF01433 Peptidase family M1 domain AC609_03280 PF13360 PQQ-like domain AC609_03285 PF00497 Bacterial extracellular solute-binding proteins, family 3 AC609_03300 PF00107 Zinc-binding dehydrogenase AC609_03300 PF08240 Alcohol dehydrogenase GroES-like domain AC609_03310 PF00158 Sigma-54 interaction domain AC609_03310 PF01590 GAF domain AC609_03310 PF02954 Bacterial regulatory protein, Fis family AC609_03325 PF00294 pfkB family carbohydrate kinase AC609_03335 PF04085 rod shape-determining protein MreC AC609_03345 PF03717 Penicillin-binding Protein dimerisation domain AC609_03345 PF00905 Penicillin binding protein transpeptidase domain AC609_03350 PF01098 Cell cycle protein AC609_03355 PF02534 Type IV secretory system Conjugative DNA transfer AC609_03360 PF05598 Transposase domain (DUF772) AC609_03360 PF01609 Transposase DDE domain AC609_03380 PF00295 Glycosyl hydrolases family 28 AC609_03385 PF13406 Transglycosylase SLT domain AC609_03390 PF05036 Sporulation related domain AC609_03390 PF03330 Lytic transglycolase AC609_03395 PF07943 Penicillin-binding protein 5, C-terminal domain AC609_03395 PF00768 D-alanyl-D-alanine carboxypeptidase AC609_03405 PF04359 Protein of unknown function (DUF493) AC609_03410 PF03099 Biotin/lipoate A/B protein ligase family AC609_03415 PF04055 Radical SAM superfamily AC609_03415 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AC609_03420 PF00595 PDZ domain AC609_03420 PF03572 Peptidase family S41 AC609_03420 PF17804 Tail specific protease N-terminal domain AC609_03420 PF11818 C-terminal domain of tail specific protease (DUF3340) AC609_03430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC609_03430 PF03466 LysR substrate binding domain AC609_03440 PF01467 Cytidylyltransferase-like AC609_03440 PF00293 NUDIX domain AC609_03475 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AC609_03475 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AC609_03480 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AC609_03480 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AC609_03485 PF04972 BON domain AC609_03490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC609_03490 PF01590 GAF domain AC609_03490 PF00512 His Kinase A (phospho-acceptor) domain AC609_03490 PF08446 PAS fold AC609_03490 PF00360 Phytochrome region AC609_03495 PF00072 Response regulator receiver domain AC609_03500 PF00512 His Kinase A (phospho-acceptor) domain AC609_03500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC609_03505 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AC609_03550 PF00263 Bacterial type II and III secretion system protein AC609_03550 PF03958 Bacterial type II/III secretion system short domain AC609_03555 PF00437 Type II/IV secretion system protein AC609_03560 PF00482 Type II secretion system (T2SS), protein F AC609_03565 PF08334 Type II secretion system (T2SS), protein G AC609_03565 PF07963 Prokaryotic N-terminal methylation motif AC609_03570 PF07963 Prokaryotic N-terminal methylation motif AC609_03570 PF12019 Type II transport protein GspH AC609_03575 PF07963 Prokaryotic N-terminal methylation motif AC609_03575 PF02501 Type II secretion system (T2SS), protein I AC609_03580 PF07963 Prokaryotic N-terminal methylation motif AC609_03580 PF11612 Type II secretion system (T2SS), protein J AC609_03585 PF03934 Type II secretion system (T2SS), protein K AC609_03610 PF07690 Major Facilitator Superfamily AC609_03615 PF00356 Bacterial regulatory proteins, lacI family AC609_03620 PF01380 SIS domain AC609_03625 PF01979 Amidohydrolase family AC609_03635 PF01966 HD domain AC609_03635 PF01743 Poly A polymerase head domain AC609_03635 PF12627 Probable RNA and SrmB- binding site of polymerase A AC609_03640 PF01464 Transglycosylase SLT domain AC609_03640 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain AC609_03645 PF00593 TonB dependent receptor AC609_03645 PF07715 TonB-dependent Receptor Plug Domain AC609_03650 PF10458 Valyl tRNA synthetase tRNA binding arm AC609_03650 PF08264 Anticodon-binding domain of tRNA AC609_03650 PF00133 tRNA synthetases class I (I, L, M and V) AC609_03665 PF00883 Cytosol aminopeptidase family, catalytic domain AC609_03665 PF02789 Cytosol aminopeptidase family, N-terminal domain AC609_03675 PF03739 Lipopolysaccharide export system permease LptF/LptG AC609_03690 PF00589 Phage integrase family AC609_03690 PF02899 Phage integrase, N-terminal SAM-like domain AC609_03695 PF10411 Disulfide bond isomerase protein N-terminus AC609_03695 PF13098 Thioredoxin-like domain AC609_03700 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AC609_03700 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AC609_03700 PF02769 AIR synthase related protein, C-terminal domain AC609_03710 PF13018 Extended Signal Peptide of Type V secretion system AC609_03710 PF03895 YadA-like membrane anchor domain AC609_03710 PF05658 Head domain of trimeric autotransporter adhesin AC609_03710 PF05662 Coiled stalk of trimeric autotransporter adhesin AC609_03715 PF04151 Bacterial pre-peptidase C-terminal domain AC609_03715 PF00082 Subtilase family AC609_03720 PF05658 Head domain of trimeric autotransporter adhesin AC609_03720 PF13018 Extended Signal Peptide of Type V secretion system AC609_03720 PF05662 Coiled stalk of trimeric autotransporter adhesin AC609_03720 PF03895 YadA-like membrane anchor domain AC609_03725 PF04151 Bacterial pre-peptidase C-terminal domain AC609_03725 PF00082 Subtilase family AC609_03730 PF00437 Type II/IV secretion system protein AC609_03730 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AC609_03735 PF00482 Type II secretion system (T2SS), protein F AC609_03740 PF08334 Type II secretion system (T2SS), protein G AC609_03745 PF12019 Type II transport protein GspH AC609_03750 PF07963 Prokaryotic N-terminal methylation motif AC609_03760 PF03934 Type II secretion system (T2SS), protein K AC609_03765 PF05137 Fimbrial assembly protein (PilN) AC609_03770 PF10741 Type II secretion system (T2SS), protein M subtype b AC609_03780 PF00263 Bacterial type II and III secretion system protein AC609_03780 PF03958 Bacterial type II/III secretion system short domain AC609_03790 PF07702 UTRA domain AC609_03790 PF00392 Bacterial regulatory proteins, gntR family AC609_03800 PF00593 TonB dependent receptor AC609_03800 PF07715 TonB-dependent Receptor Plug Domain AC609_03850 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AC609_03850 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AC609_03865 PF03552 Cellulose synthase AC609_03865 PF00535 Glycosyl transferase family 2 AC609_03865 PF07238 PilZ domain AC609_03870 PF03170 Bacterial cellulose synthase subunit AC609_03875 PF01270 Glycosyl hydrolases family 8 AC609_03895 PF03960 ArsC family AC609_03905 PF01327 Polypeptide deformylase AC609_03910 PF12848 ABC transporter AC609_03910 PF00005 ABC transporter AC609_03920 PF00464 Serine hydroxymethyltransferase AC609_03925 PF03477 ATP cone domain AC609_03935 PF01872 RibD C-terminal domain AC609_03935 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AC609_03945 PF00872 Transposase, Mutator family AC609_03955 PF00677 Lumazine binding domain AC609_03960 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AC609_03960 PF00925 GTP cyclohydrolase II AC609_03965 PF00885 6,7-dimethyl-8-ribityllumazine synthase AC609_03970 PF01029 NusB family AC609_03975 PF02769 AIR synthase related protein, C-terminal domain AC609_03975 PF00586 AIR synthase related protein, N-terminal domain AC609_03990 PF03814 Potassium-transporting ATPase A subunit AC609_04000 PF02669 K+-transporting ATPase, c chain AC609_04005 PF02702 Osmosensitive K+ channel His kinase sensor domain AC609_04005 PF13492 GAF domain AC609_04005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC609_04005 PF00512 His Kinase A (phospho-acceptor) domain AC609_04005 PF13493 Domain of unknown function (DUF4118) AC609_04010 PF00486 Transcriptional regulatory protein, C terminal AC609_04010 PF00072 Response regulator receiver domain AC609_04020 PF02913 FAD linked oxidases, C-terminal domain AC609_04020 PF01565 FAD binding domain AC609_04025 PF04307 LexA-binding, inner membrane-associated putative hydrolase AC609_04030 PF02021 Uncharacterised protein family UPF0102 AC609_04035 PF04348 LppC putative lipoprotein AC609_04040 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AC609_04055 PF02381 MraZ protein, putative antitoxin-like AC609_04060 PF01795 MraW methylase family AC609_04065 PF04999 Cell division protein FtsL AC609_04070 PF00905 Penicillin binding protein transpeptidase domain AC609_04070 PF03717 Penicillin-binding Protein dimerisation domain AC609_04075 PF08245 Mur ligase middle domain AC609_04075 PF01225 Mur ligase family, catalytic domain AC609_04075 PF02875 Mur ligase family, glutamate ligase domain AC609_04080 PF08245 Mur ligase middle domain AC609_04080 PF02875 Mur ligase family, glutamate ligase domain AC609_04080 PF01225 Mur ligase family, catalytic domain AC609_04085 PF00953 Glycosyl transferase family 4 AC609_04090 PF01098 Cell cycle protein AC609_04095 PF03033 Glycosyltransferase family 28 N-terminal domain AC609_04095 PF04101 Glycosyltransferase family 28 C-terminal domain AC609_04100 PF01225 Mur ligase family, catalytic domain AC609_04100 PF08245 Mur ligase middle domain AC609_04100 PF02875 Mur ligase family, glutamate ligase domain AC609_04105 PF01820 D-ala D-ala ligase N-terminus AC609_04105 PF07478 D-ala D-ala ligase C-terminus AC609_04110 PF03799 Cell division protein FtsQ AC609_04110 PF08478 POTRA domain, FtsQ-type AC609_04115 PF02491 SHS2 domain inserted in FTSA AC609_04120 PF00091 Tubulin/FtsZ family, GTPase domain AC609_04120 PF12327 FtsZ family, C-terminal domain AC609_04125 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AC609_04135 PF08525 Opacity-associated protein A N-terminal motif AC609_04135 PF01476 LysM domain AC609_04135 PF01551 Peptidase family M23 AC609_04140 PF01043 SecA preprotein cross-linking domain AC609_04140 PF02810 SEC-C motif AC609_04140 PF07516 SecA Wing and Scaffold domain AC609_04140 PF07517 SecA DEAD-like domain AC609_04145 PF00293 NUDIX domain AC609_04155 PF02219 Methylenetetrahydrofolate reductase AC609_04165 PF00698 Acyl transferase domain AC609_04165 PF00107 Zinc-binding dehydrogenase AC609_04165 PF08659 KR domain AC609_04165 PF00550 Phosphopantetheine attachment site AC609_04165 PF08240 Alcohol dehydrogenase GroES-like domain AC609_04165 PF00109 Beta-ketoacyl synthase, N-terminal domain AC609_04165 PF16197 Ketoacyl-synthetase C-terminal extension AC609_04165 PF14765 Polyketide synthase dehydratase AC609_04165 PF02801 Beta-ketoacyl synthase, C-terminal domain AC609_04170 PF09286 Pro-kumamolisin, activation domain AC609_04170 PF00082 Subtilase family AC609_04180 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AC609_04185 PF00128 Alpha amylase, catalytic domain AC609_04210 PF00685 Sulfotransferase domain AC609_04220 PF13649 Methyltransferase domain AC609_04225 PF05221 S-adenosyl-L-homocysteine hydrolase AC609_04225 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AC609_04235 PF00311 Phosphoenolpyruvate carboxylase AC609_04255 PF01389 OmpA-like transmembrane domain AC609_04255 PF00691 OmpA family AC609_04270 PF00328 Histidine phosphatase superfamily (branch 2) AC609_04275 PF02773 S-adenosylmethionine synthetase, C-terminal domain AC609_04275 PF02772 S-adenosylmethionine synthetase, central domain AC609_04275 PF00438 S-adenosylmethionine synthetase, N-terminal domain AC609_04285 PF13649 Methyltransferase domain AC609_04290 PF01207 Dihydrouridine synthase (Dus) AC609_04300 PF00294 pfkB family carbohydrate kinase AC609_04305 PF07670 Nucleoside recognition AC609_04305 PF01773 Na+ dependent nucleoside transporter N-terminus AC609_04305 PF07662 Na+ dependent nucleoside transporter C-terminus AC609_04310 PF00248 Aldo/keto reductase family AC609_04320 PF07715 TonB-dependent Receptor Plug Domain AC609_04320 PF00593 TonB dependent receptor AC609_04340 PF00528 Binding-protein-dependent transport system inner membrane component AC609_04345 PF00005 ABC transporter AC609_04355 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AC609_04365 PF00005 ABC transporter AC609_04370 PF13472 GDSL-like Lipase/Acylhydrolase family AC609_04375 PF00072 Response regulator receiver domain AC609_04375 PF00486 Transcriptional regulatory protein, C terminal AC609_04380 PF08521 Two-component sensor kinase N-terminal AC609_04380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC609_04380 PF00512 His Kinase A (phospho-acceptor) domain AC609_04390 PF01219 Prokaryotic diacylglycerol kinase AC609_04400 PF04536 TPM domain AC609_04410 PF01790 Prolipoprotein diacylglyceryl transferase AC609_04415 PF00303 Thymidylate synthase AC609_04425 PF00186 Dihydrofolate reductase AC609_04430 PF00149 Calcineurin-like phosphoesterase AC609_04435 PF04379 ApaG domain AC609_04440 PF00398 Ribosomal RNA adenine dimethylase AC609_04445 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AC609_04450 PF00639 PPIC-type PPIASE domain AC609_04450 PF09312 SurA N-terminal domain AC609_04455 PF04453 LPS transport system D AC609_04455 PF03968 OstA-like protein AC609_04465 PF00850 Histone deacetylase domain AC609_04470 PF01923 Cobalamin adenosyltransferase AC609_04480 PF01494 FAD binding domain AC609_04485 PF01494 FAD binding domain AC609_04505 PF00392 Bacterial regulatory proteins, gntR family AC609_04505 PF07729 FCD domain AC609_04510 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AC609_04515 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AC609_04515 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit AC609_04520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC609_04520 PF03466 LysR substrate binding domain AC609_04525 PF13193 AMP-binding enzyme C-terminal domain AC609_04525 PF00501 AMP-binding enzyme AC609_04535 PF00378 Enoyl-CoA hydratase/isomerase AC609_04555 PF08450 SMP-30/Gluconolactonase/LRE-like region AC609_04560 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AC609_04560 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AC609_04565 PF01728 FtsJ-like methyltransferase AC609_04565 PF18125 RlmM ferredoxin-like domain AC609_04590 PF00892 EamA-like transporter family AC609_04600 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AC609_04600 PF00749 tRNA synthetases class I (E and Q), catalytic domain AC609_04615 PF00990 Diguanylate cyclase, GGDEF domain AC609_04615 PF00072 Response regulator receiver domain AC609_04620 PF01627 Hpt domain AC609_04620 PF00512 His Kinase A (phospho-acceptor) domain AC609_04620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC609_04620 PF00672 HAMP domain AC609_04620 PF00072 Response regulator receiver domain AC609_04620 PF17149 Periplasmic sensor domain found in signal transduction proteins AC609_04625 PF00196 Bacterial regulatory proteins, luxR family AC609_04625 PF00072 Response regulator receiver domain AC609_04635 PF01625 Peptide methionine sulfoxide reductase AC609_04645 PF00923 Transaldolase/Fructose-6-phosphate aldolase AC609_04650 PF14760 Rnk N-terminus AC609_04650 PF01272 Transcription elongation factor, GreA/GreB, C-term AC609_04655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC609_04655 PF03466 LysR substrate binding domain AC609_04660 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC609_04660 PF13192 Thioredoxin domain AC609_04665 PF10417 C-terminal domain of 1-Cys peroxiredoxin AC609_04665 PF00578 AhpC/TSA family AC609_04670 PF17827 PrmC N-terminal domain AC609_04670 PF05175 Methyltransferase small domain AC609_04675 PF00561 alpha/beta hydrolase fold AC609_04685 PF00293 NUDIX domain AC609_04690 PF00476 DNA polymerase family A AC609_04690 PF01612 3'-5' exonuclease AC609_04690 PF01367 5'-3' exonuclease, C-terminal SAM fold AC609_04690 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AC609_04745 PF01063 Amino-transferase class IV AC609_04750 PF04151 Bacterial pre-peptidase C-terminal domain AC609_04750 PF00082 Subtilase family AC609_04755 PF00082 Subtilase family AC609_04755 PF04151 Bacterial pre-peptidase C-terminal domain AC609_04760 PF04151 Bacterial pre-peptidase C-terminal domain AC609_04760 PF00082 Subtilase family AC609_04765 PF04073 Aminoacyl-tRNA editing domain AC609_04775 PF17189 Glycosyl hydrolase family 30 beta sandwich domain AC609_04775 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain AC609_04785 PF03358 NADPH-dependent FMN reductase AC609_04790 PF03631 Virulence factor BrkB AC609_04795 PF08534 Redoxin AC609_04800 PF00708 Acylphosphatase AC609_04810 PF03976 Polyphosphate kinase 2 (PPK2) AC609_04815 PF00994 Probable molybdopterin binding domain AC609_04825 PF00472 RF-1 domain AC609_04825 PF03462 PCRF domain AC609_04830 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AC609_04830 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AC609_04830 PF01488 Shikimate / quinate 5-dehydrogenase AC609_04840 PF03550 Outer membrane lipoprotein LolB AC609_04845 PF00288 GHMP kinases N terminal domain AC609_04845 PF08544 GHMP kinases C terminal AC609_04855 PF14572 Phosphoribosyl synthetase-associated domain AC609_04855 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AC609_04860 PF14693 Ribosomal protein TL5, C-terminal domain AC609_04860 PF01386 Ribosomal L25p family AC609_04865 PF01195 Peptidyl-tRNA hydrolase AC609_04870 PF01926 50S ribosome-binding GTPase AC609_04870 PF06071 Protein of unknown function (DUF933) AC609_04890 PF03143 Elongation factor Tu C-terminal domain AC609_04890 PF03144 Elongation factor Tu domain 2 AC609_04890 PF00009 Elongation factor Tu GTP binding domain AC609_04900 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AC609_04905 PF02357 Transcription termination factor nusG AC609_04905 PF00467 KOW motif AC609_04910 PF03946 Ribosomal protein L11, N-terminal domain AC609_04910 PF00298 Ribosomal protein L11, RNA binding domain AC609_04915 PF00687 Ribosomal protein L1p/L10e family AC609_04920 PF00466 Ribosomal protein L10 AC609_04925 PF16320 Ribosomal protein L7/L12 dimerisation domain AC609_04925 PF00542 Ribosomal protein L7/L12 C-terminal domain AC609_04930 PF10385 RNA polymerase beta subunit external 1 domain AC609_04930 PF00562 RNA polymerase Rpb2, domain 6 AC609_04930 PF04563 RNA polymerase beta subunit AC609_04930 PF04560 RNA polymerase Rpb2, domain 7 AC609_04930 PF04561 RNA polymerase Rpb2, domain 2 AC609_04930 PF04565 RNA polymerase Rpb2, domain 3 AC609_04935 PF00623 RNA polymerase Rpb1, domain 2 AC609_04935 PF04997 RNA polymerase Rpb1, domain 1 AC609_04935 PF04983 RNA polymerase Rpb1, domain 3 AC609_04935 PF05000 RNA polymerase Rpb1, domain 4 AC609_04935 PF04998 RNA polymerase Rpb1, domain 5 AC609_04940 PF00164 Ribosomal protein S12/S23 AC609_04945 PF00177 Ribosomal protein S7p/S5e AC609_04950 PF03144 Elongation factor Tu domain 2 AC609_04950 PF00679 Elongation factor G C-terminus AC609_04950 PF14492 Elongation Factor G, domain II AC609_04950 PF03764 Elongation factor G, domain IV AC609_04950 PF00009 Elongation factor Tu GTP binding domain AC609_04955 PF00009 Elongation factor Tu GTP binding domain AC609_04955 PF03144 Elongation factor Tu domain 2 AC609_04955 PF03143 Elongation factor Tu C-terminal domain AC609_04965 PF00872 Transposase, Mutator family AC609_04970 PF00338 Ribosomal protein S10p/S20e AC609_04975 PF00297 Ribosomal protein L3 AC609_04980 PF00573 Ribosomal protein L4/L1 family AC609_04985 PF00276 Ribosomal protein L23 AC609_04990 PF03947 Ribosomal Proteins L2, C-terminal domain AC609_04990 PF00181 Ribosomal Proteins L2, RNA binding domain AC609_04995 PF00203 Ribosomal protein S19 AC609_05000 PF00237 Ribosomal protein L22p/L17e AC609_05005 PF00189 Ribosomal protein S3, C-terminal domain AC609_05005 PF07650 KH domain AC609_05010 PF00252 Ribosomal protein L16p/L10e AC609_05015 PF00831 Ribosomal L29 protein AC609_05020 PF00366 Ribosomal protein S17 AC609_05025 PF00238 Ribosomal protein L14p/L23e AC609_05030 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AC609_05030 PF00467 KOW motif AC609_05035 PF00673 ribosomal L5P family C-terminus AC609_05035 PF00281 Ribosomal protein L5 AC609_05040 PF00253 Ribosomal protein S14p/S29e AC609_05045 PF00410 Ribosomal protein S8 AC609_05050 PF00347 Ribosomal protein L6 AC609_05055 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AC609_05060 PF00333 Ribosomal protein S5, N-terminal domain AC609_05060 PF03719 Ribosomal protein S5, C-terminal domain AC609_05065 PF00327 Ribosomal protein L30p/L7e AC609_05070 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AC609_05075 PF00344 SecY translocase AC609_05080 PF00416 Ribosomal protein S13/S18 AC609_05085 PF00411 Ribosomal protein S11 AC609_05090 PF01479 S4 domain AC609_05090 PF00163 Ribosomal protein S4/S9 N-terminal domain AC609_05095 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AC609_05095 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AC609_05095 PF01000 RNA polymerase Rpb3/RpoA insert domain AC609_05100 PF01196 Ribosomal protein L17 AC609_05105 PF02600 Disulfide bond formation protein DsbB AC609_05125 PF01474 Class-II DAHP synthetase family AC609_05135 PF01425 Amidase AC609_05150 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AC609_05155 PF00056 lactate/malate dehydrogenase, NAD binding domain AC609_05155 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AC609_05160 PF00043 Glutathione S-transferase, C-terminal domain AC609_05160 PF02798 Glutathione S-transferase, N-terminal domain AC609_05170 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC609_05170 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AC609_05175 PF08240 Alcohol dehydrogenase GroES-like domain AC609_05175 PF00107 Zinc-binding dehydrogenase AC609_05180 PF00872 Transposase, Mutator family AC609_05185 PF05598 Transposase domain (DUF772) AC609_05185 PF01609 Transposase DDE domain AC609_05190 PF00223 Photosystem I psaA/psaB protein AC609_05190 PF00691 OmpA family AC609_05200 PF00849 RNA pseudouridylate synthase AC609_05210 PF00155 Aminotransferase class I and II AC609_05220 PF00528 Binding-protein-dependent transport system inner membrane component AC609_05225 PF00528 Binding-protein-dependent transport system inner membrane component AC609_05230 PF12857 TOBE-like domain AC609_05230 PF17850 CysA C-terminal regulatory domain AC609_05230 PF00005 ABC transporter AC609_05240 PF00872 Transposase, Mutator family AC609_05245 PF00107 Zinc-binding dehydrogenase AC609_05245 PF08240 Alcohol dehydrogenase GroES-like domain AC609_05255 PF04185 Phosphoesterase family AC609_05255 PF05506 Domain of unknown function (DUF756) AC609_05260 PF10459 Peptidase S46 AC609_05265 PF00300 Histidine phosphatase superfamily (branch 1) AC609_05275 PF02875 Mur ligase family, glutamate ligase domain AC609_05275 PF08245 Mur ligase middle domain AC609_05290 PF00156 Phosphoribosyl transferase domain AC609_05295 PF04305 Protein of unknown function (DUF455) AC609_05310 PF00149 Calcineurin-like phosphoesterase AC609_05315 PF01569 PAP2 superfamily AC609_05320 PF00534 Glycosyl transferases group 1 AC609_05320 PF13439 Glycosyltransferase Family 4 AC609_05325 PF02541 Ppx/GppA phosphatase family AC609_05330 PF02503 Polyphosphate kinase middle domain AC609_05330 PF17941 Polyphosphate kinase C-terminal domain 1 AC609_05330 PF13089 Polyphosphate kinase N-terminal domain AC609_05330 PF13090 Polyphosphate kinase C-terminal domain 2 AC609_05335 PF11808 Phosphate regulon sensor protein PhoR AC609_05335 PF00512 His Kinase A (phospho-acceptor) domain AC609_05335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC609_05335 PF00989 PAS fold AC609_05340 PF00486 Transcriptional regulatory protein, C terminal AC609_05340 PF00072 Response regulator receiver domain AC609_05345 PF01435 Peptidase family M48 AC609_05345 PF13181 Tetratricopeptide repeat AC609_05350 PF00462 Glutaredoxin AC609_05360 PF00180 Isocitrate/isopropylmalate dehydrogenase AC609_05360 PF18324 Hypothetical protein TT1725 AC609_05395 PF00872 Transposase, Mutator family AC609_05410 PF05698 Bacterial trigger factor protein (TF) C-terminus AC609_05410 PF05697 Bacterial trigger factor protein (TF) AC609_05415 PF00574 Clp protease AC609_05420 PF06689 ClpX C4-type zinc finger AC609_05420 PF10431 C-terminal, D2-small domain, of ClpB protein AC609_05420 PF07724 AAA domain (Cdc48 subfamily) AC609_05425 PF05362 Lon protease (S16) C-terminal proteolytic domain AC609_05425 PF02190 ATP-dependent protease La (LON) substrate-binding domain AC609_05425 PF00004 ATPase family associated with various cellular activities (AAA) AC609_05430 PF00216 Bacterial DNA-binding protein AC609_05455 PF05257 CHAP domain AC609_05455 PF01476 LysM domain AC609_05460 PF00753 Metallo-beta-lactamase superfamily AC609_05460 PF16123 Hydroxyacylglutathione hydrolase C-terminus AC609_05470 PF00075 RNase H AC609_05475 PF00929 Exonuclease AC609_05495 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AC609_05505 PF00753 Metallo-beta-lactamase superfamily AC609_05505 PF12706 Beta-lactamase superfamily domain AC609_05510 PF06463 Molybdenum Cofactor Synthesis C AC609_05510 PF04055 Radical SAM superfamily AC609_05520 PF01967 MoaC family AC609_05525 PF02597 ThiS family AC609_05530 PF02391 MoaE protein AC609_05540 PF12170 DNA polymerase III tau subunit V interacting with alpha AC609_05540 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AC609_05540 PF12169 DNA polymerase III subunits gamma and tau domain III AC609_05545 PF02575 YbaB/EbfC DNA-binding family AC609_05550 PF13662 Toprim domain AC609_05550 PF02132 RecR protein AC609_05555 PF01230 HIT domain AC609_05565 PF11992 Domain of unknown function (DUF3488) AC609_05565 PF13559 Domain of unknown function (DUF4129) AC609_05565 PF01841 Transglutaminase-like superfamily AC609_05575 PF17863 AAA lid domain AC609_05575 PF07726 ATPase family associated with various cellular activities (AAA) AC609_05585 PF02545 Maf-like protein AC609_05590 PF02620 Large ribosomal RNA subunit accumulation protein YceD AC609_05595 PF01783 Ribosomal L32p protein family AC609_05600 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AC609_05600 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AC609_05610 PF00698 Acyl transferase domain AC609_05620 PF00550 Phosphopantetheine attachment site AC609_05625 PF02801 Beta-ketoacyl synthase, C-terminal domain AC609_05625 PF00109 Beta-ketoacyl synthase, N-terminal domain AC609_05630 PF00425 chorismate binding enzyme AC609_05630 PF04715 Anthranilate synthase component I, N terminal region AC609_05635 PF02618 YceG-like family AC609_05640 PF09115 DNA polymerase III, delta subunit, C terminal AC609_05670 PF06506 Propionate catabolism activator AC609_05670 PF00158 Sigma-54 interaction domain AC609_05670 PF02954 Bacterial regulatory protein, Fis family AC609_05680 PF00285 Citrate synthase, C-terminal domain AC609_05685 PF00330 Aconitase family (aconitate hydratase) AC609_05685 PF00694 Aconitase C-terminal domain AC609_05695 PF04303 PrpF protein AC609_05700 PF00593 TonB dependent receptor AC609_05700 PF07715 TonB-dependent Receptor Plug Domain AC609_05710 PF11974 Bacterial alpha-2-macroglobulin MG3 domain AC609_05710 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain AC609_05710 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain AC609_05710 PF17962 Bacterial macroglobulin domain 6 AC609_05710 PF01835 MG2 domain AC609_05710 PF07703 Alpha-2-macroglobulin bait region domain AC609_05710 PF00207 Alpha-2-macroglobulin family AC609_05710 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain AC609_05730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC609_05730 PF00512 His Kinase A (phospho-acceptor) domain AC609_05730 PF00989 PAS fold AC609_05735 PF00905 Penicillin binding protein transpeptidase domain AC609_05735 PF00912 Transglycosylase AC609_05735 PF06832 Penicillin-Binding Protein C-terminus Family AC609_05745 PF08534 Redoxin AC609_05755 PF01556 DnaJ C terminal domain AC609_05755 PF00226 DnaJ domain AC609_05760 PF00072 Response regulator receiver domain AC609_05765 PF12221 Bacterial membrane protein N terminal AC609_05765 PF01145 SPFH domain / Band 7 family AC609_05770 PF01145 SPFH domain / Band 7 family AC609_05780 PF00709 Adenylosuccinate synthetase AC609_05785 PF01433 Peptidase family M1 domain AC609_05785 PF11838 ERAP1-like C-terminal domain AC609_05800 PF00440 Bacterial regulatory proteins, tetR family AC609_05850 PF01256 Carbohydrate kinase AC609_05860 PF00723 Glycosyl hydrolases family 15 AC609_05870 PF07971 Glycosyl hydrolase family 92 AC609_05870 PF17678 Glycosyl hydrolase family 92 N-terminal domain AC609_05895 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC609_05920 PF17755 UvrA DNA-binding domain AC609_05930 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AC609_05930 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AC609_05935 PF00941 FAD binding domain in molybdopterin dehydrogenase AC609_05935 PF03450 CO dehydrogenase flavoprotein C-terminal domain AC609_05940 PF00111 2Fe-2S iron-sulfur cluster binding domain AC609_05940 PF01799 [2Fe-2S] binding domain AC609_05975 PF00717 Peptidase S24-like AC609_05975 PF01726 LexA DNA binding domain AC609_05995 PF07733 Bacterial DNA polymerase III alpha NTPase domain AC609_05995 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AC609_05995 PF14579 Helix-hairpin-helix motif AC609_05995 PF02811 PHP domain AC609_06000 PF00326 Prolyl oligopeptidase family AC609_06010 PF03169 OPT oligopeptide transporter protein AC609_06035 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AC609_06035 PF07676 WD40-like Beta Propeller Repeat AC609_06035 PF00326 Prolyl oligopeptidase family AC609_06055 PF12833 Helix-turn-helix domain AC609_06055 PF02311 AraC-like ligand binding domain AC609_06070 PF00872 Transposase, Mutator family AC609_06080 PF00199 Catalase AC609_06080 PF06628 Catalase-related immune-responsive AC609_06080 PF18011 C-terminal domain found in long catalases AC609_06085 PF00248 Aldo/keto reductase family AC609_06090 PF00135 Carboxylesterase family AC609_06095 PF02347 Glycine cleavage system P-protein AC609_06115 PF03412 Peptidase C39 family AC609_06115 PF00005 ABC transporter AC609_06115 PF00664 ABC transporter transmembrane region AC609_06120 PF07690 Major Facilitator Superfamily AC609_06130 PF00665 Integrase core domain AC609_06130 PF13276 HTH-like domain AC609_06130 PF13333 Integrase core domain AC609_06160 PF00884 Sulfatase AC609_06160 PF08019 Phosphoethanolamine transferase EptA/EptB AC609_06175 PF00486 Transcriptional regulatory protein, C terminal AC609_06175 PF00072 Response regulator receiver domain AC609_06180 PF08521 Two-component sensor kinase N-terminal AC609_06180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC609_06180 PF00512 His Kinase A (phospho-acceptor) domain AC609_06190 PF03776 Septum formation topological specificity factor MinE AC609_06195 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AC609_06200 PF03775 Septum formation inhibitor MinC, C-terminal domain AC609_06200 PF05209 Septum formation inhibitor MinC, N-terminal domain AC609_06210 PF07730 Histidine kinase AC609_06215 PF00072 Response regulator receiver domain AC609_06215 PF00196 Bacterial regulatory proteins, luxR family AC609_06235 PF00730 HhH-GPD superfamily base excision DNA repair protein AC609_06260 PF02222 ATP-grasp domain AC609_06270 PF04377 Arginine-tRNA-protein transferase, C terminus AC609_06270 PF04376 Arginine-tRNA-protein transferase, N terminus AC609_06285 PF08281 Sigma-70, region 4 AC609_06285 PF04542 Sigma-70 region 2 AC609_06300 PF00378 Enoyl-CoA hydratase/isomerase AC609_06315 PF17760 UvrA interaction domain AC609_06315 PF17755 UvrA DNA-binding domain AC609_06315 PF00005 ABC transporter AC609_06320 PF00829 Ribosomal prokaryotic L21 protein AC609_06325 PF01016 Ribosomal L27 protein AC609_06330 PF01018 GTP1/OBG AC609_06330 PF01926 50S ribosome-binding GTPase AC609_06335 PF01649 Ribosomal protein S20 AC609_06340 PF03023 Lipid II flippase MurJ AC609_06345 PF06574 FAD synthetase AC609_06345 PF01687 Riboflavin kinase AC609_06350 PF00133 tRNA synthetases class I (I, L, M and V) AC609_06350 PF08264 Anticodon-binding domain of tRNA AC609_06350 PF06827 Zinc finger found in FPG and IleRS AC609_06355 PF01252 Signal peptidase (SPase) II AC609_06360 PF02401 LytB protein AC609_06460 PF16793 RepB DNA-primase from phage plasmid AC609_06460 PF03389 MobA/MobL family AC609_06465 PF13087 AAA domain AC609_06465 PF13091 PLD-like domain AC609_06495 PF00589 Phage integrase family AC609_06500 PF06481 COX Aromatic Rich Motif AC609_06500 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AC609_06505 PF00115 Cytochrome C and Quinol oxidase polypeptide I AC609_06510 PF00510 Cytochrome c oxidase subunit III AC609_06515 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AC609_06525 PF18073 Rubredoxin metal binding domain AC609_06530 PF05656 Protein of unknown function (DUF805) AC609_06540 PF12833 Helix-turn-helix domain AC609_06545 PF00183 Hsp90 protein AC609_06545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC609_06555 PF01740 STAS domain AC609_06555 PF08678 Rsbr N terminal AC609_06560 PF01740 STAS domain AC609_06575 PF00072 Response regulator receiver domain AC609_06575 PF00512 His Kinase A (phospho-acceptor) domain AC609_06575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC609_06575 PF01627 Hpt domain AC609_06575 PF17149 Periplasmic sensor domain found in signal transduction proteins AC609_06575 PF00672 HAMP domain AC609_06580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC609_06580 PF08448 PAS fold AC609_06580 PF13188 PAS domain AC609_06580 PF00512 His Kinase A (phospho-acceptor) domain AC609_06580 PF00072 Response regulator receiver domain AC609_06585 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain AC609_06585 PF04616 Glycosyl hydrolases family 43 AC609_06590 PF07715 TonB-dependent Receptor Plug Domain AC609_06590 PF00593 TonB dependent receptor AC609_06595 PF00085 Thioredoxin AC609_06600 PF07237 Protein of unknown function (DUF1428) AC609_06605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC609_06605 PF13493 Domain of unknown function (DUF4118) AC609_06605 PF13492 GAF domain AC609_06605 PF00512 His Kinase A (phospho-acceptor) domain AC609_06605 PF02702 Osmosensitive K+ channel His kinase sensor domain AC609_06610 PF01339 CheB methylesterase AC609_06615 PF01739 CheR methyltransferase, SAM binding domain AC609_06615 PF03705 CheR methyltransferase, all-alpha domain AC609_06620 PF00512 His Kinase A (phospho-acceptor) domain AC609_06620 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AC609_06620 PF00672 HAMP domain AC609_06620 PF01627 Hpt domain AC609_06620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC609_06620 PF00072 Response regulator receiver domain AC609_06625 PF13426 PAS domain AC609_06625 PF00072 Response regulator receiver domain AC609_06625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC609_06630 PF00072 Response regulator receiver domain AC609_06635 PF06964 Alpha-L-arabinofuranosidase C-terminal domain AC609_06645 PF01263 Aldose 1-epimerase AC609_06650 PF01578 Cytochrome C assembly protein AC609_06655 PF00448 SRP54-type protein, GTPase domain AC609_06655 PF02881 SRP54-type protein, helical bundle domain AC609_06655 PF02978 Signal peptide binding domain AC609_06665 PF03060 Nitronate monooxygenase AC609_06670 PF01063 Amino-transferase class IV AC609_06675 PF00886 Ribosomal protein S16 AC609_06680 PF01782 RimM N-terminal domain AC609_06680 PF05239 PRC-barrel domain AC609_06685 PF01746 tRNA (Guanine-1)-methyltransferase AC609_06690 PF01245 Ribosomal protein L19 AC609_06695 PF01554 MatE AC609_06715 PF01479 S4 domain AC609_06720 PF00141 Peroxidase AC609_06730 PF05192 MutS domain III AC609_06730 PF01624 MutS domain I AC609_06730 PF00488 MutS domain V AC609_06730 PF05190 MutS family domain IV AC609_06730 PF05188 MutS domain II AC609_06735 PF00665 Integrase core domain AC609_06735 PF13276 HTH-like domain AC609_06735 PF13333 Integrase core domain AC609_06740 PF01527 Transposase AC609_06745 PF01527 Transposase AC609_06750 PF13683 Integrase core domain AC609_06750 PF13276 HTH-like domain AC609_06755 PF13683 Integrase core domain AC609_06755 PF13276 HTH-like domain AC609_06760 PF01527 Transposase AC609_06780 PF02837 Glycosyl hydrolases family 2, sugar binding domain AC609_06780 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AC609_06780 PF16355 Domain of unknown function (DUF4982) AC609_06780 PF00703 Glycosyl hydrolases family 2 AC609_06780 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 AC609_06785 PF07745 Glycosyl hydrolase family 53 AC609_06795 PF09856 Predicted transcriptional regulator (DUF2083) AC609_06795 PF06114 IrrE N-terminal-like domain AC609_06795 PF01381 Helix-turn-helix AC609_06800 PF00171 Aldehyde dehydrogenase family AC609_06805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC609_06805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AC609_06805 PF02770 Acyl-CoA dehydrogenase, middle domain AC609_06810 PF00378 Enoyl-CoA hydratase/isomerase AC609_06815 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AC609_06815 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AC609_06815 PF00378 Enoyl-CoA hydratase/isomerase AC609_06820 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AC609_06820 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AC609_06825 PF01545 Cation efflux family AC609_06835 PF13181 Tetratricopeptide repeat AC609_06845 PF13181 Tetratricopeptide repeat AC609_06850 PF07715 TonB-dependent Receptor Plug Domain AC609_06850 PF00593 TonB dependent receptor AC609_06855 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AC609_06855 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AC609_06855 PF00378 Enoyl-CoA hydratase/isomerase AC609_06860 PF08281 Sigma-70, region 4 AC609_06860 PF04542 Sigma-70 region 2 AC609_06870 PF13180 PDZ domain AC609_06875 PF06421 GTP-binding protein LepA C-terminus AC609_06875 PF03144 Elongation factor Tu domain 2 AC609_06875 PF00009 Elongation factor Tu GTP binding domain AC609_06875 PF00679 Elongation factor G C-terminus AC609_06880 PF10502 Signal peptidase, peptidase S26 AC609_06890 PF14622 Ribonuclease-III-like AC609_06890 PF00035 Double-stranded RNA binding motif AC609_06895 PF07650 KH domain AC609_06895 PF01926 50S ribosome-binding GTPase AC609_06900 PF02565 Recombination protein O C terminal AC609_06900 PF11967 Recombination protein O N terminal AC609_06910 PF05958 tRNA (Uracil-5-)-methyltransferase AC609_06920 PF01323 DSBA-like thioredoxin domain AC609_06925 PF01593 Flavin containing amine oxidoreductase AC609_06930 PF04244 Deoxyribodipyrimidine photo-lyase-related protein AC609_06935 PF00933 Glycosyl hydrolase family 3 N terminal domain AC609_06945 PF01048 Phosphorylase superfamily AC609_06950 PF00313 'Cold-shock' DNA-binding domain AC609_06955 PF01494 FAD binding domain AC609_06965 PF00271 Helicase conserved C-terminal domain AC609_06965 PF08494 DEAD/H associated AC609_06965 PF00270 DEAD/DEAH box helicase AC609_06970 PF01068 ATP dependent DNA ligase domain AC609_06970 PF04679 ATP dependent DNA ligase C terminal region AC609_06970 PF04675 DNA ligase N terminus AC609_06980 PF04679 ATP dependent DNA ligase C terminal region AC609_06980 PF01068 ATP dependent DNA ligase domain AC609_06980 PF04675 DNA ligase N terminus AC609_06995 PF00990 Diguanylate cyclase, GGDEF domain AC609_06995 PF00072 Response regulator receiver domain AC609_07010 PF00108 Thiolase, N-terminal domain AC609_07010 PF02803 Thiolase, C-terminal domain AC609_07015 PF12951 Passenger-associated-transport-repeat AC609_07015 PF00082 Subtilase family AC609_07015 PF03797 Autotransporter beta-domain AC609_07020 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AC609_07020 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AC609_07030 PF01863 Protein of unknown function DUF45 AC609_07035 PF07043 Protein of unknown function (DUF1328) AC609_07045 PF01258 Prokaryotic dksA/traR C4-type zinc finger AC609_07070 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AC609_07080 PF03831 PhnA domain AC609_07080 PF08274 PhnA Zinc-Ribbon AC609_07090 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AC609_07095 PF07690 Major Facilitator Superfamily AC609_07130 PF09924 Uncharacterised conserved protein (DUF2156) AC609_07130 PF03706 Lysylphosphatidylglycerol synthase TM region AC609_07140 PF01042 Endoribonuclease L-PSP AC609_07185 PF04545 Sigma-70, region 4 AC609_07185 PF04542 Sigma-70 region 2 AC609_07205 PF04060 Putative Fe-S cluster AC609_07215 PF09334 tRNA synthetases class I (M) AC609_07215 PF01588 Putative tRNA binding domain AC609_07235 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AC609_07250 PF00324 Amino acid permease AC609_07255 PF02574 Homocysteine S-methyltransferase AC609_07265 PF02592 Putative vitamin uptake transporter AC609_07285 PF03551 Transcriptional regulator PadR-like family AC609_07320 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AC609_07325 PF02811 PHP domain AC609_07325 PF14579 Helix-hairpin-helix motif AC609_07325 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AC609_07325 PF07733 Bacterial DNA polymerase III alpha NTPase domain AC609_07325 PF01336 OB-fold nucleic acid binding domain AC609_07330 PF01351 Ribonuclease HII AC609_07335 PF02684 Lipid-A-disaccharide synthetase AC609_07340 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AC609_07340 PF00132 Bacterial transferase hexapeptide (six repeats) AC609_07345 PF07977 FabA-like domain AC609_07350 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AC609_07350 PF00132 Bacterial transferase hexapeptide (six repeats) AC609_07360 PF07244 Surface antigen variable number repeat AC609_07360 PF01103 Surface antigen AC609_07365 PF17820 PDZ domain AC609_07365 PF02163 Peptidase family M50 AC609_07370 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AC609_07370 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AC609_07370 PF13288 DXP reductoisomerase C-terminal domain AC609_07380 PF01255 Putative undecaprenyl diphosphate synthase AC609_07385 PF01765 Ribosome recycling factor AC609_07390 PF00696 Amino acid kinase family AC609_07395 PF00990 Diguanylate cyclase, GGDEF domain AC609_07395 PF00072 Response regulator receiver domain AC609_07400 PF00889 Elongation factor TS AC609_07405 PF00318 Ribosomal protein S2 AC609_07440 PF00557 Metallopeptidase family M24 AC609_07445 PF01909 Nucleotidyltransferase domain AC609_07445 PF08335 GlnD PII-uridylyltransferase AC609_07445 PF01966 HD domain AC609_07450 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AC609_07450 PF14602 Hexapeptide repeat of succinyl-transferase AC609_07450 PF00132 Bacterial transferase hexapeptide (six repeats) AC609_07455 PF03960 ArsC family AC609_07460 PF01546 Peptidase family M20/M25/M40 AC609_07460 PF07687 Peptidase dimerisation domain AC609_07465 PF00733 Asparagine synthase AC609_07465 PF13537 Glutamine amidotransferase domain AC609_07480 PF00593 TonB dependent receptor AC609_07480 PF07715 TonB-dependent Receptor Plug Domain AC609_07485 PF01804 Penicillin amidase AC609_07490 PF00210 Ferritin-like domain AC609_07510 PF00521 DNA gyrase/topoisomerase IV, subunit A AC609_07510 PF03989 DNA gyrase C-terminal domain, beta-propeller AC609_07525 PF01527 Transposase AC609_07530 PF13276 HTH-like domain AC609_07530 PF00665 Integrase core domain AC609_07530 PF13333 Integrase core domain AC609_07535 PF00872 Transposase, Mutator family AC609_07565 PF02321 Outer membrane efflux protein AC609_07570 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AC609_07570 PF00529 HlyD membrane-fusion protein of T1SS AC609_07575 PF07690 Major Facilitator Superfamily AC609_07595 PF01915 Glycosyl hydrolase family 3 C-terminal domain AC609_07595 PF14310 Fibronectin type III-like domain AC609_07595 PF00933 Glycosyl hydrolase family 3 N terminal domain AC609_07605 PF00854 POT family AC609_07630 PF12802 MarR family AC609_07635 PF01432 Peptidase family M3 AC609_07640 PF00255 Glutathione peroxidase AC609_07645 PF00970 Oxidoreductase FAD-binding domain AC609_07645 PF00175 Oxidoreductase NAD-binding domain AC609_07650 PF00005 ABC transporter AC609_07655 PF05683 Fumarase C-terminus AC609_07655 PF05681 Fumarate hydratase (Fumerase) AC609_07670 PF00484 Carbonic anhydrase AC609_07675 PF02253 Phospholipase A1 AC609_07685 PF00313 'Cold-shock' DNA-binding domain AC609_07700 PF00899 ThiF family AC609_07705 PF01026 TatD related DNase AC609_07720 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC609_07720 PF02770 Acyl-CoA dehydrogenase, middle domain AC609_07720 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AC609_07730 PF13417 Glutathione S-transferase, N-terminal domain AC609_07735 PF00733 Asparagine synthase AC609_07735 PF13537 Glutamine amidotransferase domain AC609_07740 PF03358 NADPH-dependent FMN reductase AC609_07745 PF00772 DnaB-like helicase N terminal domain AC609_07745 PF03796 DnaB-like helicase C terminal domain AC609_07750 PF03441 FAD binding domain of DNA photolyase AC609_07750 PF00875 DNA photolyase AC609_07755 PF05736 OprF membrane domain AC609_07755 PF00691 OmpA family AC609_07760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC609_07760 PF03466 LysR substrate binding domain AC609_07775 PF00529 HlyD membrane-fusion protein of T1SS AC609_07775 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AC609_07780 PF00873 AcrB/AcrD/AcrF family AC609_07785 PF00106 short chain dehydrogenase AC609_07790 PF02321 Outer membrane efflux protein AC609_07795 PF00990 Diguanylate cyclase, GGDEF domain AC609_07795 PF08448 PAS fold AC609_07805 PF00990 Diguanylate cyclase, GGDEF domain AC609_07825 PF01668 SmpB protein AC609_07830 PF03364 Polyketide cyclase / dehydrase and lipid transport AC609_07835 PF03658 RnfH family Ubiquitin AC609_07840 PF04355 SmpA / OmlA family AC609_07845 PF01475 Ferric uptake regulator family AC609_07850 PF02463 RecF/RecN/SMC N terminal domain AC609_07855 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding AC609_07855 PF01628 HrcA protein C terminal domain AC609_07860 PF01025 GrpE AC609_07865 PF00012 Hsp70 protein AC609_07870 PF00684 DnaJ central domain AC609_07870 PF01556 DnaJ C terminal domain AC609_07870 PF00226 DnaJ domain AC609_07875 PF08543 Phosphomethylpyrimidine kinase AC609_07900 PF03412 Peptidase C39 family AC609_07900 PF00005 ABC transporter AC609_07900 PF00664 ABC transporter transmembrane region AC609_07905 PF03466 LysR substrate binding domain AC609_07905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC609_07910 PF00664 ABC transporter transmembrane region AC609_07910 PF00005 ABC transporter AC609_07915 PF01205 Uncharacterized protein family UPF0029 AC609_07920 PF03641 Possible lysine decarboxylase AC609_07925 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AC609_07925 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC609_07930 PF02817 e3 binding domain AC609_07930 PF00364 Biotin-requiring enzyme AC609_07930 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AC609_07935 PF00676 Dehydrogenase E1 component AC609_07935 PF02779 Transketolase, pyrimidine binding domain AC609_07935 PF16078 2-oxoglutarate dehydrogenase N-terminus AC609_07935 PF16870 2-oxoglutarate dehydrogenase C-terminal AC609_07945 PF08007 Cupin superfamily protein AC609_07955 PF00206 Lyase AC609_07955 PF08328 Adenylosuccinate lyase C-terminal AC609_07965 PF00571 CBS domain AC609_07965 PF01595 Cyclin M transmembrane N-terminal domain AC609_07965 PF03471 Transporter associated domain AC609_07970 PF10415 Fumarase C C-terminus AC609_07970 PF00206 Lyase AC609_07995 PF00005 ABC transporter AC609_08000 PF00392 Bacterial regulatory proteins, gntR family AC609_08005 PF00255 Glutathione peroxidase AC609_08010 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AC609_08010 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AC609_08015 PF04102 SlyX AC609_08030 PF00356 Bacterial regulatory proteins, lacI family AC609_08035 PF07690 Major Facilitator Superfamily AC609_08040 PF00294 pfkB family carbohydrate kinase AC609_08050 PF02607 B12 binding domain AC609_08050 PF02574 Homocysteine S-methyltransferase AC609_08050 PF02310 B12 binding domain AC609_08050 PF00809 Pterin binding enzyme AC609_08050 PF02965 Vitamin B12 dependent methionine synthase, activation domain AC609_08055 PF02310 B12 binding domain AC609_08055 PF02574 Homocysteine S-methyltransferase AC609_08055 PF02607 B12 binding domain AC609_08055 PF02965 Vitamin B12 dependent methionine synthase, activation domain AC609_08055 PF00809 Pterin binding enzyme AC609_08060 PF01209 ubiE/COQ5 methyltransferase family AC609_08065 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC609_08065 PF02770 Acyl-CoA dehydrogenase, middle domain AC609_08065 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AC609_08080 PF00773 RNB domain AC609_08080 PF00575 S1 RNA binding domain AC609_08080 PF17876 Cold shock domain AC609_08080 PF08206 Ribonuclease B OB domain AC609_08080 PF08461 Ribonuclease R winged-helix domain AC609_08090 PF08032 RNA 2'-O ribose methyltransferase substrate binding AC609_08090 PF00588 SpoU rRNA Methylase family AC609_08105 PF00929 Exonuclease AC609_08115 PF01895 PhoU domain AC609_08120 PF00005 ABC transporter AC609_08125 PF00528 Binding-protein-dependent transport system inner membrane component AC609_08130 PF00528 Binding-protein-dependent transport system inner membrane component AC609_08135 PF12849 PBP superfamily domain AC609_08140 PF12849 PBP superfamily domain AC609_08155 PF00484 Carbonic anhydrase AC609_08160 PF01740 STAS domain AC609_08160 PF00916 Sulfate permease family AC609_08165 PF10576 Iron-sulfur binding domain of endonuclease III AC609_08165 PF00633 Helix-hairpin-helix motif AC609_08165 PF00730 HhH-GPD superfamily base excision DNA repair protein AC609_08175 PF00378 Enoyl-CoA hydratase/isomerase AC609_08180 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AC609_08180 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AC609_08185 PF00293 NUDIX domain AC609_08190 PF00581 Rhodanese-like domain AC609_08230 PF01170 Putative RNA methylase family UPF0020 AC609_08230 PF02926 THUMP domain AC609_08230 PF10672 S-adenosylmethionine-dependent methyltransferase AC609_08235 PF01513 ATP-NAD kinase AC609_08255 PF08411 Exonuclease C-terminal AC609_08255 PF00929 Exonuclease AC609_08260 PF01494 FAD binding domain AC609_08265 PF00266 Aminotransferase class-V AC609_08275 PF06052 3-hydroxyanthranilic acid dioxygenase AC609_08280 PF00484 Carbonic anhydrase AC609_08325 PF00196 Bacterial regulatory proteins, luxR family AC609_08325 PF00072 Response regulator receiver domain AC609_08355 PF01336 OB-fold nucleic acid binding domain AC609_08355 PF00152 tRNA synthetases class II (D, K and N) AC609_08360 PF01521 Iron-sulphur cluster biosynthesis AC609_08365 PF01250 Ribosomal protein S6 AC609_08370 PF01084 Ribosomal protein S18 AC609_08375 PF01281 Ribosomal protein L9, N-terminal domain AC609_08375 PF03948 Ribosomal protein L9, C-terminal domain AC609_08380 PF02463 RecF/RecN/SMC N terminal domain AC609_08385 PF04354 ZipA, C-terminal FtsZ-binding domain AC609_08395 PF00155 Aminotransferase class I and II AC609_08400 PF01653 NAD-dependent DNA ligase adenylation domain AC609_08400 PF03120 NAD-dependent DNA ligase OB-fold domain AC609_08400 PF12826 Helix-hairpin-helix motif AC609_08400 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AC609_08400 PF00533 BRCA1 C Terminus (BRCT) domain AC609_08405 PF00152 tRNA synthetases class II (D, K and N) AC609_08415 PF01008 Initiation factor 2 subunit family AC609_08420 PF00521 DNA gyrase/topoisomerase IV, subunit A AC609_08420 PF03989 DNA gyrase C-terminal domain, beta-propeller AC609_08425 PF13360 PQQ-like domain AC609_08435 PF17391 Urocanase N-terminal domain AC609_08435 PF17392 Urocanase C-terminal domain AC609_08435 PF01175 Urocanase Rossmann-like domain AC609_08450 PF00221 Aromatic amino acid lyase AC609_08455 PF07969 Amidohydrolase family AC609_08470 PF07702 UTRA domain AC609_08470 PF00392 Bacterial regulatory proteins, gntR family AC609_08495 PF01794 Ferric reductase like transmembrane component AC609_08500 PF00174 Oxidoreductase molybdopterin binding domain AC609_08505 PF00266 Aminotransferase class-V AC609_08510 PF01817 Chorismate mutase type II AC609_08510 PF01842 ACT domain AC609_08510 PF00800 Prephenate dehydratase AC609_08515 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AC609_08525 PF03544 Gram-negative bacterial TonB protein C-terminal AC609_08530 PF02403 Seryl-tRNA synthetase N-terminal domain AC609_08530 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AC609_08535 PF02525 Flavodoxin-like fold AC609_08540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC609_08540 PF03466 LysR substrate binding domain AC609_08605 PF00072 Response regulator receiver domain AC609_08605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC609_08605 PF13426 PAS domain AC609_08615 PF06745 KaiC AC609_08620 PF13188 PAS domain AC609_08620 PF00072 Response regulator receiver domain AC609_08620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC609_08620 PF00512 His Kinase A (phospho-acceptor) domain AC609_08620 PF08448 PAS fold AC609_08630 PF03918 Cytochrome C biogenesis protein AC609_08635 PF08534 Redoxin AC609_08640 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AC609_08640 PF01578 Cytochrome C assembly protein AC609_08645 PF03100 CcmE AC609_08650 PF04995 Heme exporter protein D (CcmD) AC609_08655 PF01578 Cytochrome C assembly protein AC609_08660 PF00082 Subtilase family AC609_08670 PF04542 Sigma-70 region 2 AC609_08670 PF08281 Sigma-70, region 4 AC609_08680 PF00034 Cytochrome c AC609_08695 PF05523 WxcM-like, C-terminal AC609_08715 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AC609_08720 PF01943 Polysaccharide biosynthesis protein AC609_08725 PF00535 Glycosyl transferase family 2 AC609_08740 PF08241 Methyltransferase domain AC609_08775 PF00005 ABC transporter AC609_08780 PF00664 ABC transporter transmembrane region AC609_08780 PF00005 ABC transporter AC609_08785 PF07690 Major Facilitator Superfamily AC609_08790 PF00296 Luciferase-like monooxygenase AC609_08805 PF00571 CBS domain AC609_08805 PF03471 Transporter associated domain AC609_08805 PF01595 Cyclin M transmembrane N-terminal domain AC609_08815 PF01384 Phosphate transporter family AC609_08830 PF00204 DNA gyrase B AC609_08830 PF01751 Toprim domain AC609_08830 PF00986 DNA gyrase B subunit, carboxyl terminus AC609_08830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC609_08840 PF00117 Glutamine amidotransferase class-I AC609_08840 PF06418 CTP synthase N-terminus AC609_08845 PF00793 DAHP synthetase I family AC609_08855 PF03952 Enolase, N-terminal domain AC609_08855 PF00113 Enolase, C-terminal TIM barrel domain AC609_08860 PF04977 Septum formation initiator AC609_08865 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AC609_08870 PF02542 YgbB family AC609_08875 PF01142 tRNA pseudouridine synthase D (TruD) AC609_08880 PF01713 Smr domain AC609_08885 PF01975 Survival protein SurE AC609_08895 PF09335 SNARE associated Golgi protein AC609_08900 PF01476 LysM domain AC609_08900 PF01551 Peptidase family M23 AC609_08905 PF04430 Protein of unknown function (DUF498/DUF598) AC609_08910 PF01985 CRS1 / YhbY (CRM) domain AC609_08915 PF01728 FtsJ-like methyltransferase AC609_08920 PF17862 AAA+ lid domain AC609_08920 PF06480 FtsH Extracellular AC609_08920 PF01434 Peptidase family M41 AC609_08920 PF00004 ATPase family associated with various cellular activities (AAA) AC609_08925 PF00809 Pterin binding enzyme AC609_08935 PF17209 Hfq protein AC609_08940 PF13167 GTP-binding GTPase N-terminal AC609_08940 PF01926 50S ribosome-binding GTPase AC609_08940 PF16360 GTP-binding GTPase Middle Region AC609_08945 PF02464 Competence-damaged protein AC609_08950 PF03109 ABC1 family AC609_08955 PF01726 LexA DNA binding domain AC609_08955 PF00717 Peptidase S24-like AC609_08960 PF00154 recA bacterial DNA recombination protein AC609_08965 PF02631 RecX family AC609_08970 PF02272 DHHA1 domain AC609_08970 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AC609_08970 PF01411 tRNA synthetases class II (A) AC609_08975 PF02599 Global regulator protein family AC609_08985 PF13426 PAS domain AC609_08985 PF08447 PAS fold AC609_08985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC609_09000 PF03466 LysR substrate binding domain AC609_09000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC609_09025 PF08543 Phosphomethylpyrimidine kinase AC609_09040 PF13638 PIN domain AC609_09040 PF02562 PhoH-like protein AC609_09045 PF00578 AhpC/TSA family AC609_09060 PF00701 Dihydrodipicolinate synthetase family AC609_09070 PF00037 4Fe-4S binding domain AC609_09070 PF11953 Domain of unknown function (DUF3470) AC609_09075 PF05035 2-keto-3-deoxy-galactonokinase AC609_09080 PF08450 SMP-30/Gluconolactonase/LRE-like region AC609_09085 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AC609_09085 PF13378 Enolase C-terminal domain-like AC609_09090 PF01081 KDPG and KHG aldolase AC609_09100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC609_09100 PF03466 LysR substrate binding domain AC609_09115 PF03442 Carbohydrate binding domain X2 AC609_09115 PF00942 Cellulose binding domain AC609_09130 PF16338 Domain of unknown function (DUF4968) AC609_09130 PF01055 Glycosyl hydrolases family 31 AC609_09130 PF17137 Domain of unknown function (DUF5110) AC609_09140 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AC609_09140 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AC609_09150 PF00083 Sugar (and other) transporter AC609_09160 PF00872 Transposase, Mutator family AC609_09175 PF01520 N-acetylmuramoyl-L-alanine amidase AC609_09180 PF02649 Type I GTP cyclohydrolase folE2 AC609_09195 PF01743 Poly A polymerase head domain AC609_09195 PF12626 Polymerase A arginine-rich C-terminus AC609_09195 PF12627 Probable RNA and SrmB- binding site of polymerase A AC609_09200 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AC609_09205 PF02548 Ketopantoate hydroxymethyltransferase AC609_09210 PF02569 Pantoate-beta-alanine ligase AC609_09215 PF02261 Aspartate decarboxylase AC609_09220 PF00342 Phosphoglucose isomerase AC609_09240 PF01915 Glycosyl hydrolase family 3 C-terminal domain AC609_09240 PF00933 Glycosyl hydrolase family 3 N terminal domain AC609_09240 PF14310 Fibronectin type III-like domain AC609_09245 PF00474 Sodium:solute symporter family AC609_09250 PF00563 EAL domain AC609_09250 PF01590 GAF domain AC609_09250 PF00360 Phytochrome region AC609_09250 PF00990 Diguanylate cyclase, GGDEF domain AC609_09260 PF02013 Cellulose or protein binding domain AC609_09260 PF00150 Cellulase (glycosyl hydrolase family 5) AC609_09265 PF00072 Response regulator receiver domain AC609_09275 PF04551 GcpE protein AC609_09280 PF01569 PAP2 superfamily AC609_09285 PF08946 Osmosensory transporter coiled coil AC609_09285 PF00083 Sugar (and other) transporter AC609_09290 PF01177 Asp/Glu/Hydantoin racemase AC609_09295 PF00892 EamA-like transporter family AC609_09300 PF01565 FAD binding domain AC609_09300 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AC609_09305 PF01180 Dihydroorotate dehydrogenase AC609_09320 PF00171 Aldehyde dehydrogenase family AC609_09335 PF00872 Transposase, Mutator family AC609_09340 PF00872 Transposase, Mutator family AC609_09345 PF00128 Alpha amylase, catalytic domain AC609_09360 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation AC609_09360 PF10566 Glycoside hydrolase 97 AC609_09360 PF14508 Glycosyl-hydrolase 97 N-terminal AC609_09375 PF00686 Starch binding domain AC609_09375 PF00128 Alpha amylase, catalytic domain AC609_09380 PF00356 Bacterial regulatory proteins, lacI family AC609_09385 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AC609_09385 PF03129 Anticodon binding domain AC609_09385 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AC609_09385 PF02824 TGS domain AC609_09390 PF00707 Translation initiation factor IF-3, C-terminal domain AC609_09390 PF05198 Translation initiation factor IF-3, N-terminal domain AC609_09395 PF01632 Ribosomal protein L35 AC609_09400 PF00453 Ribosomal protein L20 AC609_09405 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AC609_09405 PF01409 tRNA synthetases class II core domain (F) AC609_09410 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AC609_09410 PF03484 tRNA synthetase B5 domain AC609_09410 PF03483 B3/4 domain AC609_09410 PF01588 Putative tRNA binding domain AC609_09410 PF03147 Ferredoxin-fold anticodon binding domain AC609_09415 PF00216 Bacterial DNA-binding protein AC609_09420 PF13411 MerR HTH family regulatory protein AC609_09440 PF02397 Bacterial sugar transferase AC609_09460 PF00534 Glycosyl transferases group 1 AC609_09460 PF13439 Glycosyltransferase Family 4 AC609_09470 PF14667 Polysaccharide biosynthesis C-terminal domain AC609_09485 PF03808 Glycosyl transferase WecB/TagA/CpsF family AC609_09500 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AC609_09500 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AC609_09510 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family AC609_09530 PF02779 Transketolase, pyrimidine binding domain AC609_09530 PF02780 Transketolase, C-terminal domain AC609_09530 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AC609_09540 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AC609_09540 PF02770 Acyl-CoA dehydrogenase, middle domain AC609_09540 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC609_09540 PF12806 Acetyl-CoA dehydrogenase C-terminal like AC609_09550 PF08212 Lipocalin-like domain AC609_09580 PF00072 Response regulator receiver domain AC609_09580 PF13426 PAS domain AC609_09580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC609_09595 PF04362 Bacterial Fe(2+) trafficking AC609_09600 PF10576 Iron-sulfur binding domain of endonuclease III AC609_09600 PF14815 NUDIX domain AC609_09600 PF00730 HhH-GPD superfamily base excision DNA repair protein AC609_09600 PF00633 Helix-hairpin-helix motif AC609_09605 PF00448 SRP54-type protein, GTPase domain AC609_09605 PF02881 SRP54-type protein, helical bundle domain AC609_09615 PF05544 Proline racemase AC609_09620 PF01266 FAD dependent oxidoreductase AC609_09630 PF04324 BFD-like [2Fe-2S] binding domain AC609_09630 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC609_09635 PF00701 Dihydrodipicolinate synthetase family AC609_09640 PF00171 Aldehyde dehydrogenase family AC609_09645 PF00557 Metallopeptidase family M24 AC609_09645 PF01321 Creatinase/Prolidase N-terminal domain AC609_09660 PF13520 Amino acid permease AC609_09685 PF00082 Subtilase family AC609_09685 PF09286 Pro-kumamolisin, activation domain AC609_09695 PF00593 TonB dependent receptor AC609_09695 PF07715 TonB-dependent Receptor Plug Domain AC609_09705 PF07532 Bacterial Ig-like domain (group 4) AC609_09775 PF00872 Transposase, Mutator family AC609_09810 PF08479 POTRA domain, ShlB-type AC609_09810 PF17287 POTRA domain AC609_09810 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AC609_09820 PF00872 Transposase, Mutator family AC609_09830 PF13683 Integrase core domain AC609_09830 PF13276 HTH-like domain AC609_09835 PF01527 Transposase AC609_09840 PF03073 TspO/MBR family AC609_09845 PF00872 Transposase, Mutator family AC609_09850 PF01842 ACT domain AC609_09850 PF03447 Homoserine dehydrogenase, NAD binding domain AC609_09850 PF00742 Homoserine dehydrogenase AC609_09850 PF13840 ACT domain AC609_09850 PF00696 Amino acid kinase family AC609_09855 PF08544 GHMP kinases C terminal AC609_09855 PF00288 GHMP kinases N terminal domain AC609_09865 PF07519 Tannase and feruloyl esterase AC609_09875 PF14821 Threonine synthase N terminus AC609_09875 PF00291 Pyridoxal-phosphate dependent enzyme AC609_09885 PF13545 Crp-like helix-turn-helix domain AC609_09885 PF00027 Cyclic nucleotide-binding domain AC609_09890 PF03129 Anticodon binding domain AC609_09890 PF13393 Histidyl-tRNA synthetase AC609_09905 PF01634 ATP phosphoribosyltransferase AC609_09905 PF08029 HisG, C-terminal domain AC609_09910 PF00815 Histidinol dehydrogenase AC609_09915 PF00155 Aminotransferase class I and II AC609_09920 PF00475 Imidazoleglycerol-phosphate dehydratase AC609_09925 PF00117 Glutamine amidotransferase class-I AC609_09930 PF00977 Histidine biosynthesis protein AC609_09935 PF00977 Histidine biosynthesis protein AC609_09940 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AC609_09940 PF01502 Phosphoribosyl-AMP cyclohydrolase AC609_09960 PF03079 ARD/ARD' family AC609_09965 PF00596 Class II Aldolase and Adducin N-terminal domain AC609_09970 PF13520 Amino acid permease AC609_09975 PF13520 Amino acid permease AC609_09985 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AC609_09985 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AC609_09990 PF01565 FAD binding domain AC609_09990 PF02913 FAD linked oxidases, C-terminal domain AC609_10010 PF08207 Elongation factor P (EF-P) KOW-like domain AC609_10010 PF09285 Elongation factor P, C-terminal AC609_10010 PF01132 Elongation factor P (EF-P) OB domain AC609_10015 PF00106 short chain dehydrogenase AC609_10020 PF00682 HMGL-like AC609_10030 PF00378 Enoyl-CoA hydratase/isomerase AC609_10040 PF07670 Nucleoside recognition AC609_10040 PF07664 Ferrous iron transport protein B C terminus AC609_10040 PF02421 Ferrous iron transport protein B AC609_10055 PF00155 Aminotransferase class I and II AC609_10060 PF03475 3-alpha domain AC609_10060 PF03473 MOSC domain AC609_10065 PF05173 Dihydrodipicolinate reductase, C-terminus AC609_10065 PF01113 Dihydrodipicolinate reductase, N-terminus AC609_10070 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AC609_10070 PF00117 Glutamine amidotransferase class-I AC609_10080 PF02142 MGS-like domain AC609_10080 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AC609_10080 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AC609_10085 PF03449 Transcription elongation factor, N-terminal AC609_10085 PF01272 Transcription elongation factor, GreA/GreB, C-term AC609_10095 PF01368 DHH family AC609_10095 PF17768 RecJ OB domain AC609_10095 PF02272 DHHA1 domain AC609_10110 PF00472 RF-1 domain AC609_10110 PF03462 PCRF domain AC609_10115 PF00152 tRNA synthetases class II (D, K and N) AC609_10115 PF01336 OB-fold nucleic acid binding domain AC609_10120 PF00072 Response regulator receiver domain AC609_10125 PF00072 Response regulator receiver domain AC609_10125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC609_10125 PF00512 His Kinase A (phospho-acceptor) domain AC609_10125 PF01627 Hpt domain AC609_10130 PF00512 His Kinase A (phospho-acceptor) domain AC609_10130 PF00072 Response regulator receiver domain AC609_10130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC609_10130 PF01627 Hpt domain AC609_10135 PF00378 Enoyl-CoA hydratase/isomerase AC609_10140 PF00501 AMP-binding enzyme AC609_10140 PF13193 AMP-binding enzyme C-terminal domain AC609_10155 PF00330 Aconitase family (aconitate hydratase) AC609_10155 PF00694 Aconitase C-terminal domain AC609_10170 PF00330 Aconitase family (aconitate hydratase) AC609_10170 PF06434 Aconitate hydratase 2 N-terminus AC609_10170 PF11791 Aconitate B N-terminal domain AC609_10175 PF00561 alpha/beta hydrolase fold AC609_10180 PF00990 Diguanylate cyclase, GGDEF domain AC609_10180 PF03707 Bacterial signalling protein N terminal repeat AC609_10180 PF00563 EAL domain AC609_10185 PF01339 CheB methylesterase AC609_10185 PF00072 Response regulator receiver domain AC609_10190 PF03975 CheD chemotactic sensory transduction AC609_10195 PF03705 CheR methyltransferase, all-alpha domain AC609_10195 PF01739 CheR methyltransferase, SAM binding domain AC609_10200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC609_10200 PF02203 Tar ligand binding domain homologue AC609_10200 PF00672 HAMP domain AC609_10210 PF01584 CheW-like domain AC609_10215 PF07317 Flagellar regulator YcgR AC609_10215 PF07238 PilZ domain AC609_10220 PF00672 HAMP domain AC609_10220 PF02203 Tar ligand binding domain homologue AC609_10220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC609_10225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC609_10225 PF02203 Tar ligand binding domain homologue AC609_10225 PF00672 HAMP domain AC609_10230 PF00672 HAMP domain AC609_10230 PF02203 Tar ligand binding domain homologue AC609_10230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC609_10235 PF00672 HAMP domain AC609_10235 PF02203 Tar ligand binding domain homologue AC609_10235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC609_10240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC609_10240 PF02203 Tar ligand binding domain homologue AC609_10240 PF00672 HAMP domain AC609_10250 PF02203 Tar ligand binding domain homologue AC609_10250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC609_10250 PF00672 HAMP domain AC609_10255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC609_10255 PF00672 HAMP domain AC609_10255 PF02203 Tar ligand binding domain homologue AC609_10260 PF00672 HAMP domain AC609_10260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC609_10265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC609_10265 PF00672 HAMP domain AC609_10265 PF02203 Tar ligand binding domain homologue AC609_10275 PF02203 Tar ligand binding domain homologue AC609_10275 PF00672 HAMP domain AC609_10275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC609_10280 PF00672 HAMP domain AC609_10280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC609_10280 PF02203 Tar ligand binding domain homologue AC609_10290 PF02203 Tar ligand binding domain homologue AC609_10290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC609_10290 PF00672 HAMP domain AC609_10295 PF00672 HAMP domain AC609_10295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC609_10295 PF02203 Tar ligand binding domain homologue AC609_10300 PF02895 Signal transducing histidine kinase, homodimeric domain AC609_10300 PF01584 CheW-like domain AC609_10300 PF09078 CheY binding AC609_10300 PF01627 Hpt domain AC609_10300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC609_10305 PF00072 Response regulator receiver domain AC609_10315 PF01584 CheW-like domain AC609_10320 PF13614 AAA domain AC609_10325 PF00691 OmpA family AC609_10325 PF13677 Membrane MotB of proton-channel complex MotA/MotB AC609_10330 PF01618 MotA/TolQ/ExbB proton channel family AC609_10370 PF01627 Hpt domain AC609_10370 PF02895 Signal transducing histidine kinase, homodimeric domain AC609_10370 PF01584 CheW-like domain AC609_10370 PF07194 P2 response regulator binding domain AC609_10370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC609_10375 PF04344 Chemotaxis phosphatase, CheZ AC609_10380 PF00072 Response regulator receiver domain AC609_10385 PF04545 Sigma-70, region 4 AC609_10385 PF04542 Sigma-70 region 2 AC609_10385 PF04539 Sigma-70 region 3 AC609_10390 PF10609 NUBPL iron-transfer P-loop NTPase AC609_10395 PF00448 SRP54-type protein, GTPase domain AC609_10400 PF00771 FHIPEP family AC609_10405 PF01312 FlhB HrpN YscU SpaS Family AC609_10410 PF00563 EAL domain AC609_10410 PF00990 Diguanylate cyclase, GGDEF domain AC609_10410 PF03707 Bacterial signalling protein N terminal repeat AC609_10420 PF01609 Transposase DDE domain AC609_10420 PF05598 Transposase domain (DUF772) AC609_10430 PF01311 Bacterial export proteins, family 1 AC609_10435 PF01313 Bacterial export proteins, family 3 AC609_10440 PF05598 Transposase domain (DUF772) AC609_10440 PF01609 Transposase DDE domain AC609_10445 PF00813 FliP family AC609_10450 PF04347 Flagellar biosynthesis protein, FliO AC609_10455 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AC609_10460 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AC609_10460 PF02154 Flagellar motor switch protein FliM AC609_10480 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AC609_10480 PF18269 T3SS EscN ATPase C-terminal domain AC609_10490 PF01706 FliG C-terminal domain AC609_10490 PF14842 FliG N-terminal domain AC609_10490 PF14841 FliG middle domain AC609_10495 PF08345 Flagellar M-ring protein C-terminal AC609_10495 PF01514 Secretory protein of YscJ/FliF family AC609_10500 PF02049 Flagellar hook-basal body complex protein FliE AC609_10505 PF00535 Glycosyl transferase family 2 AC609_10505 PF00534 Glycosyl transferases group 1 AC609_10525 PF02348 Cytidylyltransferase AC609_10540 PF00872 Transposase, Mutator family AC609_10575 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AC609_10575 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AC609_10585 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AC609_10590 PF00158 Sigma-54 interaction domain AC609_10590 PF00072 Response regulator receiver domain AC609_10590 PF02954 Bacterial regulatory protein, Fis family AC609_10595 PF00072 Response regulator receiver domain AC609_10595 PF01339 CheB methylesterase AC609_10600 PF00309 Sigma-54 factor, Activator interacting domain (AID) AC609_10600 PF04963 Sigma-54 factor, core binding domain AC609_10600 PF04552 Sigma-54, DNA binding domain AC609_10605 PF00196 Bacterial regulatory proteins, luxR family AC609_10605 PF00072 Response regulator receiver domain AC609_10620 PF02561 Flagellar protein FliS AC609_10625 PF07196 Flagellin hook IN motif AC609_10625 PF02465 Flagellar hook-associated protein 2 N-terminus AC609_10625 PF07195 Flagellar hook-associated protein 2 C-terminus AC609_10630 PF00700 Bacterial flagellin C-terminal helical region AC609_10630 PF00669 Bacterial flagellin N-terminal helical region AC609_10635 PF05598 Transposase domain (DUF772) AC609_10635 PF01609 Transposase DDE domain AC609_10640 PF00669 Bacterial flagellin N-terminal helical region AC609_10640 PF00700 Bacterial flagellin C-terminal helical region AC609_10645 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AC609_10645 PF07196 Flagellin hook IN motif AC609_10650 PF10135 Rod binding protein AC609_10650 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AC609_10655 PF02119 Flagellar P-ring protein AC609_10660 PF02107 Flagellar L-ring protein AC609_10665 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AC609_10665 PF00460 Flagella basal body rod protein AC609_10680 PF00460 Flagella basal body rod protein AC609_10680 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AC609_10685 PF00460 Flagella basal body rod protein AC609_10685 PF07559 Flagellar basal body protein FlaE AC609_10685 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AC609_10690 PF03963 Flagellar hook capping protein - N-terminal region AC609_10695 PF00460 Flagella basal body rod protein AC609_10695 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AC609_10705 PF00072 Response regulator receiver domain AC609_10705 PF01584 CheW-like domain AC609_10730 PF00512 His Kinase A (phospho-acceptor) domain AC609_10730 PF00989 PAS fold AC609_10730 PF13188 PAS domain AC609_10730 PF13426 PAS domain AC609_10730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC609_10735 PF00990 Diguanylate cyclase, GGDEF domain AC609_10735 PF03707 Bacterial signalling protein N terminal repeat AC609_10735 PF00563 EAL domain AC609_10740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC609_10740 PF07730 Histidine kinase AC609_10745 PF00563 EAL domain AC609_10745 PF03707 Bacterial signalling protein N terminal repeat AC609_10745 PF00990 Diguanylate cyclase, GGDEF domain AC609_10755 PF00672 HAMP domain AC609_10755 PF12729 Four helix bundle sensory module for signal transduction AC609_10755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC609_10760 PF04356 Protein of unknown function (DUF489) AC609_10770 PF00293 NUDIX domain AC609_10775 PF02617 ATP-dependent Clp protease adaptor protein ClpS AC609_10780 PF00004 ATPase family associated with various cellular activities (AAA) AC609_10780 PF07724 AAA domain (Cdc48 subfamily) AC609_10780 PF02861 Clp amino terminal domain, pathogenicity island component AC609_10780 PF17871 AAA lid domain AC609_10780 PF10431 C-terminal, D2-small domain, of ClpB protein AC609_10785 PF01176 Translation initiation factor 1A / IF-1 AC609_10790 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AC609_10800 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC609_10805 PF01580 FtsK/SpoIIIE family AC609_10805 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AC609_10805 PF09397 Ftsk gamma domain AC609_10805 PF17854 FtsK alpha domain AC609_10815 PF03548 Outer membrane lipoprotein carrier protein LolA AC609_10825 PF00004 ATPase family associated with various cellular activities (AAA) AC609_10825 PF16193 AAA C-terminal domain AC609_10825 PF12002 MgsA AAA+ ATPase C terminal AC609_10830 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AC609_10835 PF02803 Thiolase, C-terminal domain AC609_10835 PF00108 Thiolase, N-terminal domain AC609_10840 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AC609_10840 PF00378 Enoyl-CoA hydratase/isomerase AC609_10840 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AC609_10850 PF00334 Nucleoside diphosphate kinase AC609_10855 PF04055 Radical SAM superfamily AC609_10865 PF13464 Domain of unknown function (DUF4115) AC609_10875 PF13360 PQQ-like domain AC609_10875 PF01011 PQQ enzyme repeat AC609_10880 PF01926 50S ribosome-binding GTPase AC609_10880 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AC609_10885 PF03453 MoeA N-terminal region (domain I and II) AC609_10885 PF00994 Probable molybdopterin binding domain AC609_10885 PF03454 MoeA C-terminal region (domain IV) AC609_10890 PF00899 ThiF family AC609_10915 PF08240 Alcohol dehydrogenase GroES-like domain AC609_10915 PF00107 Zinc-binding dehydrogenase AC609_10915 PF13823 Alcohol dehydrogenase GroES-associated AC609_10925 PF03372 Endonuclease/Exonuclease/phosphatase family AC609_10935 PF03453 MoeA N-terminal region (domain I and II) AC609_10935 PF00994 Probable molybdopterin binding domain AC609_10935 PF03454 MoeA C-terminal region (domain IV) AC609_10940 PF12804 MobA-like NTP transferase domain AC609_10965 PF10414 Sirohaem synthase dimerisation region AC609_10965 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AC609_10965 PF14824 Sirohaem biosynthesis protein central AC609_10970 PF03861 ANTAR domain AC609_10970 PF00072 Response regulator receiver domain AC609_10980 PF07690 Major Facilitator Superfamily AC609_10985 PF04324 BFD-like [2Fe-2S] binding domain AC609_10985 PF18267 Rubredoxin NAD+ reductase C-terminal domain AC609_10985 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AC609_10985 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AC609_10985 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC609_10995 PF01568 Molydopterin dinucleotide binding domain AC609_10995 PF00384 Molybdopterin oxidoreductase AC609_10995 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AC609_10995 PF04324 BFD-like [2Fe-2S] binding domain AC609_11000 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AC609_11010 PF05974 Domain of unknown function (DUF892) AC609_11030 PF00990 Diguanylate cyclase, GGDEF domain AC609_11030 PF00563 EAL domain AC609_11030 PF08447 PAS fold AC609_11030 PF08448 PAS fold AC609_11035 PF12951 Passenger-associated-transport-repeat AC609_11035 PF12951 Passenger-associated-transport-repeat AC609_11040 PF00196 Bacterial regulatory proteins, luxR family AC609_11040 PF00072 Response regulator receiver domain AC609_11045 PF00512 His Kinase A (phospho-acceptor) domain AC609_11045 PF08448 PAS fold AC609_11045 PF13426 PAS domain AC609_11045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC609_11045 PF00072 Response regulator receiver domain AC609_11055 PF00873 AcrB/AcrD/AcrF family AC609_11060 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AC609_11065 PF00082 Subtilase family AC609_11065 PF03797 Autotransporter beta-domain AC609_11080 PF07995 Glucose / Sorbosone dehydrogenase AC609_11090 PF00872 Transposase, Mutator family AC609_11100 PF05598 Transposase domain (DUF772) AC609_11100 PF01609 Transposase DDE domain AC609_11105 PF00872 Transposase, Mutator family AC609_11110 PF07516 SecA Wing and Scaffold domain AC609_11110 PF02810 SEC-C motif AC609_11110 PF01043 SecA preprotein cross-linking domain AC609_11110 PF07517 SecA DEAD-like domain AC609_11115 PF00872 Transposase, Mutator family AC609_11125 PF08241 Methyltransferase domain AC609_11125 PF12697 Alpha/beta hydrolase family AC609_11140 PF02585 GlcNAc-PI de-N-acetylase AC609_11140 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AC609_11160 PF00872 Transposase, Mutator family AC609_11180 PF18340 DNA relaxase TraI 2B/2B-like domain AC609_11180 PF08751 TrwC relaxase AC609_11180 PF07057 DNA helicase TraI AC609_11180 PF18272 single-stranded DNA binding TraI N-terminal subdomain AC609_11235 PF00872 Transposase, Mutator family AC609_11245 PF13614 AAA domain AC609_11290 PF03695 Uncharacterised protein family (UPF0149) AC609_11290 PF02810 SEC-C motif AC609_11305 PF00239 Resolvase, N terminal domain AC609_11305 PF02796 Helix-turn-helix domain of resolvase AC609_11330 PF00872 Transposase, Mutator family AC609_11360 PF00440 Bacterial regulatory proteins, tetR family AC609_11370 PF01106 NifU-like domain AC609_11375 PF01329 Pterin 4 alpha carbinolamine dehydratase AC609_11385 PF02535 ZIP Zinc transporter AC609_11390 PF11737 Protein of unknown function (DUF3300) AC609_11395 PF00849 RNA pseudouridylate synthase AC609_11395 PF01479 S4 domain AC609_11400 PF12111 Polyribonucleotide phosphorylase C terminal AC609_11400 PF10150 Ribonuclease E/G family AC609_11400 PF00575 S1 RNA binding domain AC609_11405 PF01609 Transposase DDE domain AC609_11405 PF05598 Transposase domain (DUF772) AC609_11410 PF00196 Bacterial regulatory proteins, luxR family AC609_11410 PF00072 Response regulator receiver domain AC609_11425 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AC609_11435 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AC609_11435 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AC609_11435 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AC609_11460 PF01066 CDP-alcohol phosphatidyltransferase AC609_11465 PF01541 GIY-YIG catalytic domain AC609_11465 PF02151 UvrB/uvrC motif AC609_11465 PF08459 UvrC Helix-hairpin-helix N-terminal AC609_11475 PF01451 Low molecular weight phosphotyrosine protein phosphatase AC609_11480 PF02348 Cytidylyltransferase AC609_11485 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AC609_11490 PF00005 ABC transporter AC609_11490 PF00664 ABC transporter transmembrane region AC609_11500 PF01618 MotA/TolQ/ExbB proton channel family AC609_11505 PF00753 Metallo-beta-lactamase superfamily AC609_11505 PF03772 Competence protein AC609_11515 PF00005 ABC transporter AC609_11520 PF02687 FtsX-like permease family AC609_11520 PF12704 MacB-like periplasmic core domain AC609_11530 PF03937 Flavinator of succinate dehydrogenase AC609_11535 PF13085 2Fe-2S iron-sulfur cluster binding domain AC609_11545 PF00890 FAD binding domain AC609_11545 PF02910 Fumarate reductase flavoprotein C-term AC609_11550 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AC609_11555 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AC609_11560 PF01571 Aminomethyltransferase folate-binding domain AC609_11565 PF17912 MalK OB fold domain AC609_11565 PF00005 ABC transporter AC609_11570 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AC609_11570 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AC609_11575 PF02685 Glucokinase AC609_11580 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AC609_11585 PF00920 Dehydratase family AC609_11590 PF01081 KDPG and KHG aldolase AC609_11595 PF00873 AcrB/AcrD/AcrF family AC609_11600 PF00873 AcrB/AcrD/AcrF family AC609_11605 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AC609_11615 PF00034 Cytochrome c AC609_11660 PF00072 Response regulator receiver domain AC609_11660 PF00512 His Kinase A (phospho-acceptor) domain AC609_11660 PF09308 LuxQ, periplasmic AC609_11660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC609_11665 PF16921 Tex protein YqgF-like domain AC609_11665 PF17674 HHH domain AC609_11665 PF09371 Tex-like protein N-terminal domain AC609_11665 PF00575 S1 RNA binding domain AC609_11675 PF01266 FAD dependent oxidoreductase AC609_11675 PF00355 Rieske [2Fe-2S] domain AC609_11690 PF00561 alpha/beta hydrolase fold AC609_11700 PF01066 CDP-alcohol phosphatidyltransferase AC609_11720 PF03618 Kinase/pyrophosphorylase AC609_11725 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AC609_11725 PF02896 PEP-utilising enzyme, TIM barrel domain AC609_11725 PF00391 PEP-utilising enzyme, mobile domain AC609_11735 PF00929 Exonuclease AC609_11740 PF14437 MafB19-like deaminase AC609_11745 PF01325 Iron dependent repressor, N-terminal DNA binding domain AC609_11745 PF02742 Iron dependent repressor, metal binding and dimerisation domain AC609_11750 PF01566 Natural resistance-associated macrophage protein AC609_11755 PF00561 alpha/beta hydrolase fold AC609_11770 PF05977 Transmembrane secretion effector AC609_11775 PF07969 Amidohydrolase family AC609_11785 PF00857 Isochorismatase family AC609_11805 PF00072 Response regulator receiver domain AC609_11805 PF00196 Bacterial regulatory proteins, luxR family AC609_11830 PF03377 TAL effector repeat AC609_11840 PF03466 LysR substrate binding domain AC609_11840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC609_11845 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AC609_11845 PF00361 Proton-conducting membrane transporter AC609_11845 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus AC609_11850 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) AC609_11860 PF00107 Zinc-binding dehydrogenase AC609_11860 PF08240 Alcohol dehydrogenase GroES-like domain AC609_11865 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AC609_11870 PF03466 LysR substrate binding domain AC609_11870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC609_11875 PF00665 Integrase core domain AC609_11875 PF13333 Integrase core domain AC609_11875 PF13276 HTH-like domain AC609_11880 PF01527 Transposase AC609_11925 PF00117 Glutamine amidotransferase class-I AC609_11925 PF02540 NAD synthase AC609_11925 PF00958 GMP synthase C terminal domain AC609_11930 PF00571 CBS domain AC609_11930 PF00478 IMP dehydrogenase / GMP reductase domain AC609_11935 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AC609_11935 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AC609_11945 PF00999 Sodium/hydrogen exchanger family AC609_11945 PF02254 TrkA-N domain AC609_11950 PF00483 Nucleotidyl transferase AC609_11955 PF02719 Polysaccharide biosynthesis protein AC609_11960 PF00953 Glycosyl transferase family 4 AC609_11965 PF18073 Rubredoxin metal binding domain AC609_11975 PF00216 Bacterial DNA-binding protein AC609_11980 PF00575 S1 RNA binding domain AC609_11985 PF02224 Cytidylate kinase AC609_11990 PF00444 Ribosomal protein L36 AC609_12000 PF04371 Porphyromonas-type peptidyl-arginine deiminase AC609_12005 PF00795 Carbon-nitrogen hydrolase AC609_12030 PF00528 Binding-protein-dependent transport system inner membrane component AC609_12035 PF00528 Binding-protein-dependent transport system inner membrane component AC609_12055 PF00356 Bacterial regulatory proteins, lacI family AC609_12070 PF03795 YCII-related domain AC609_12075 PF02616 Segregation and condensation protein ScpA AC609_12080 PF04079 Segregation and condensation complex subunit ScpB AC609_12085 PF00849 RNA pseudouridylate synthase AC609_12085 PF01479 S4 domain AC609_12100 PF00795 Carbon-nitrogen hydrolase AC609_12105 PF00155 Aminotransferase class I and II AC609_12110 PF00005 ABC transporter AC609_12115 PF03379 CcmB protein AC609_12120 PF01578 Cytochrome C assembly protein AC609_12130 PF03100 CcmE AC609_12135 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AC609_12135 PF01578 Cytochrome C assembly protein AC609_12140 PF08534 Redoxin AC609_12145 PF03918 Cytochrome C biogenesis protein AC609_12155 PF00561 alpha/beta hydrolase fold AC609_12165 PF00005 ABC transporter AC609_12165 PF00664 ABC transporter transmembrane region AC609_12170 PF00005 ABC transporter AC609_12170 PF00664 ABC transporter transmembrane region AC609_12175 PF01654 Cytochrome bd terminal oxidase subunit I AC609_12180 PF02322 Cytochrome bd terminal oxidase subunit II AC609_12200 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AC609_12200 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AC609_12210 PF00171 Aldehyde dehydrogenase family AC609_12215 PF00696 Amino acid kinase family AC609_12215 PF01472 PUA domain AC609_12225 PF00206 Lyase AC609_12230 PF01118 Semialdehyde dehydrogenase, NAD binding domain AC609_12240 PF00696 Amino acid kinase family AC609_12240 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase AC609_12255 PF00764 Arginosuccinate synthase AC609_12260 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AC609_12260 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AC609_12270 PF09190 DALR domain AC609_12270 PF01406 tRNA synthetases class I (C) catalytic domain AC609_12275 PF02657 Fe-S metabolism associated domain AC609_12285 PF01258 Prokaryotic dksA/traR C4-type zinc finger AC609_12295 PF01809 Putative membrane protein insertion efficiency factor AC609_12300 PF01979 Amidohydrolase family AC609_12305 PF01551 Peptidase family M23 AC609_12305 PF08460 Bacterial SH3 domain AC609_12320 PF06751 Ethanolamine ammonia lyase large subunit (EutB) AC609_12325 PF05985 Ethanolamine ammonia-lyase light chain (EutC) AC609_12335 PF00753 Metallo-beta-lactamase superfamily AC609_12350 PF01609 Transposase DDE domain AC609_12350 PF05598 Transposase domain (DUF772) AC609_12355 PF00295 Glycosyl hydrolases family 28 AC609_12375 PF13419 Haloacid dehalogenase-like hydrolase AC609_12385 PF01979 Amidohydrolase family AC609_12395 PF08207 Elongation factor P (EF-P) KOW-like domain AC609_12395 PF09285 Elongation factor P, C-terminal AC609_12395 PF01132 Elongation factor P (EF-P) OB domain AC609_12400 PF04055 Radical SAM superfamily AC609_12405 PF00990 Diguanylate cyclase, GGDEF domain AC609_12405 PF03707 Bacterial signalling protein N terminal repeat AC609_12405 PF13188 PAS domain AC609_12405 PF00563 EAL domain AC609_12415 PF00588 SpoU rRNA Methylase family AC609_12420 PF00459 Inositol monophosphatase family AC609_12425 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AC609_12425 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AC609_12430 PF00545 ribonuclease AC609_12445 PF00270 DEAD/DEAH box helicase AC609_12445 PF00271 Helicase conserved C-terminal domain AC609_12445 PF03880 DbpA RNA binding domain AC609_12450 PF00156 Phosphoribosyl transferase domain AC609_12455 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AC609_12460 PF00135 Carboxylesterase family AC609_12475 PF02798 Glutathione S-transferase, N-terminal domain AC609_12475 PF14497 Glutathione S-transferase, C-terminal domain AC609_12480 PF00313 'Cold-shock' DNA-binding domain AC609_12485 PF07152 YaeQ protein AC609_12495 PF00072 Response regulator receiver domain AC609_12495 PF00990 Diguanylate cyclase, GGDEF domain AC609_12495 PF00563 EAL domain AC609_12500 PF01435 Peptidase family M48 AC609_12505 PF00749 tRNA synthetases class I (E and Q), catalytic domain AC609_12510 PF00106 short chain dehydrogenase AC609_12515 PF05233 PHB accumulation regulatory domain AC609_12515 PF07879 PHB/PHA accumulation regulator DNA-binding domain AC609_12530 PF01119 DNA mismatch repair protein, C-terminal domain AC609_12530 PF08676 MutL C terminal dimerisation domain AC609_12535 PF01520 N-acetylmuramoyl-L-alanine amidase AC609_12535 PF11741 AMIN domain AC609_12540 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AC609_12545 PF01256 Carbohydrate kinase AC609_12545 PF03853 YjeF-related protein N-terminus AC609_12550 PF08331 Domain of unknown function (DUF1730) AC609_12555 PF02601 Exonuclease VII, large subunit AC609_12555 PF13742 OB-fold nucleic acid binding domain AC609_12565 PF03781 Sulfatase-modifying factor enzyme 1 AC609_12570 PF01612 3'-5' exonuclease AC609_12570 PF00570 HRDC domain AC609_12575 PF01068 ATP dependent DNA ligase domain AC609_12575 PF13298 DNA polymerase Ligase (LigD) AC609_12575 PF04679 ATP dependent DNA ligase C terminal region AC609_12605 PF01584 CheW-like domain AC609_12610 PF02743 Cache domain AC609_12610 PF00672 HAMP domain AC609_12610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC609_12615 PF02245 Methylpurine-DNA glycosylase (MPG) AC609_12620 PF08494 DEAD/H associated AC609_12620 PF00270 DEAD/DEAH box helicase AC609_12620 PF00271 Helicase conserved C-terminal domain AC609_12635 PF04386 Stringent starvation protein B AC609_12640 PF02798 Glutathione S-transferase, N-terminal domain AC609_12640 PF00043 Glutathione S-transferase, C-terminal domain AC609_12645 PF02167 Cytochrome C1 family AC609_12650 PF00032 Cytochrome b(C-terminal)/b6/petD AC609_12650 PF00033 Cytochrome b/b6/petB AC609_12655 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AC609_12655 PF00355 Rieske [2Fe-2S] domain AC609_12665 PF01464 Transglycosylase SLT domain AC609_12680 PF00919 Uncharacterized protein family UPF0004 AC609_12680 PF04055 Radical SAM superfamily AC609_12680 PF01938 TRAM domain AC609_12685 PF02562 PhoH-like protein AC609_12695 PF02130 Uncharacterized protein family UPF0054 AC609_12705 PF03471 Transporter associated domain AC609_12705 PF00571 CBS domain AC609_12720 PF00171 Aldehyde dehydrogenase family AC609_12730 PF00528 Binding-protein-dependent transport system inner membrane component AC609_12735 PF00528 Binding-protein-dependent transport system inner membrane component AC609_12740 PF08402 TOBE domain AC609_12740 PF00005 ABC transporter AC609_12745 PF02321 Outer membrane efflux protein AC609_12750 PF07690 Major Facilitator Superfamily AC609_12755 PF13533 Biotin-lipoyl like AC609_12760 PF13416 Bacterial extracellular solute-binding protein AC609_12765 PF00202 Aminotransferase class-III AC609_12770 PF00120 Glutamine synthetase, catalytic domain AC609_12775 PF07722 Peptidase C26 AC609_12780 PF00120 Glutamine synthetase, catalytic domain AC609_12785 PF01266 FAD dependent oxidoreductase AC609_12790 PF00990 Diguanylate cyclase, GGDEF domain AC609_12790 PF00072 Response regulator receiver domain AC609_12795 PF01814 Hemerythrin HHE cation binding domain AC609_12800 PF07690 Major Facilitator Superfamily AC609_12800 PF00083 Sugar (and other) transporter AC609_12810 PF00384 Molybdopterin oxidoreductase AC609_12815 PF02634 FdhD/NarQ family AC609_12820 PF07690 Major Facilitator Superfamily AC609_12825 PF00202 Aminotransferase class-III AC609_12835 PF04286 Protein of unknown function (DUF445) AC609_12840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC609_12840 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AC609_12840 PF00072 Response regulator receiver domain AC609_12840 PF01627 Hpt domain AC609_12840 PF00512 His Kinase A (phospho-acceptor) domain AC609_12840 PF00672 HAMP domain AC609_12845 PF00072 Response regulator receiver domain AC609_12850 PF07690 Major Facilitator Superfamily AC609_12855 PF02203 Tar ligand binding domain homologue AC609_12855 PF00672 HAMP domain AC609_12855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC609_12885 PF05088 Bacterial NAD-glutamate dehydrogenase AC609_12895 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AC609_12895 PF00529 HlyD membrane-fusion protein of T1SS AC609_12900 PF00873 AcrB/AcrD/AcrF family AC609_12905 PF00356 Bacterial regulatory proteins, lacI family AC609_12910 PF05524 PEP-utilising enzyme, N-terminal AC609_12910 PF00391 PEP-utilising enzyme, mobile domain AC609_12910 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AC609_12910 PF02896 PEP-utilising enzyme, TIM barrel domain AC609_12910 PF00381 PTS HPr component phosphorylation site AC609_12915 PF00294 pfkB family carbohydrate kinase AC609_12920 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AC609_12935 PF00872 Transposase, Mutator family AC609_12940 PF02355 Protein export membrane protein AC609_12940 PF07549 SecD/SecF GG Motif AC609_12945 PF02355 Protein export membrane protein AC609_12945 PF13721 SecD export protein N-terminal TM region AC609_12945 PF07549 SecD/SecF GG Motif AC609_12950 PF02699 Preprotein translocase subunit AC609_12955 PF01702 Queuine tRNA-ribosyltransferase AC609_12960 PF02547 Queuosine biosynthesis protein AC609_13010 PF00759 Glycosyl hydrolase family 9 AC609_13010 PF02927 Cellulase N-terminal ig-like domain AC609_13025 PF00037 4Fe-4S binding domain AC609_13040 PF01467 Cytidylyltransferase-like AC609_13050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC609_13050 PF00183 Hsp90 protein AC609_13095 PF00872 Transposase, Mutator family AC609_13135 PF03135 CagE, TrbE, VirB family, component of type IV transporter system AC609_13150 PF01464 Transglycosylase SLT domain AC609_13155 PF00437 Type II/IV secretion system protein AC609_13160 PF03743 Bacterial conjugation TrbI-like protein AC609_13180 PF02534 Type IV secretory system Conjugative DNA transfer AC609_13195 PF02151 UvrB/uvrC motif AC609_13195 PF04851 Type III restriction enzyme, res subunit AC609_13195 PF00271 Helicase conserved C-terminal domain AC609_13195 PF17757 UvrB interaction domain AC609_13195 PF12344 Ultra-violet resistance protein B AC609_13265 PF13683 Integrase core domain AC609_13265 PF13276 HTH-like domain AC609_13270 PF01527 Transposase AC609_13365 PF00182 Chitinase class I AC609_13415 PF01555 DNA methylase AC609_13435 PF01527 Transposase AC609_13440 PF13683 Integrase core domain AC609_13440 PF13276 HTH-like domain AC609_13490 PF06580 Histidine kinase AC609_13490 PF07694 5TMR of 5TMR-LYT AC609_13495 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases AC609_13495 PF03641 Possible lysine decarboxylase AC609_13495 PF11892 Domain of unknown function (DUF3412) AC609_13500 PF00593 TonB dependent receptor AC609_13505 PF01914 MarC family integral membrane protein AC609_13515 PF00462 Glutaredoxin AC609_13520 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AC609_13520 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AC609_13525 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AC609_13525 PF02222 ATP-grasp domain AC609_13530 PF00731 AIR carboxylase AC609_13540 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AC609_13540 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AC609_13550 PF00013 KH domain AC609_13550 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AC609_13550 PF01138 3' exoribonuclease family, domain 1 AC609_13550 PF00575 S1 RNA binding domain AC609_13550 PF03725 3' exoribonuclease family, domain 2 AC609_13555 PF00312 Ribosomal protein S15 AC609_13560 PF09157 Pseudouridine synthase II TruB, C-terminal AC609_13560 PF01509 TruB family pseudouridylate synthase (N terminal domain) AC609_13560 PF16198 tRNA pseudouridylate synthase B C-terminal domain AC609_13565 PF02033 Ribosome-binding factor A AC609_13570 PF00009 Elongation factor Tu GTP binding domain AC609_13570 PF11987 Translation-initiation factor 2 AC609_13570 PF08364 Bacterial translation initiation factor IF-2 associated region AC609_13570 PF04760 Translation initiation factor IF-2, N-terminal region AC609_13575 PF08529 NusA N-terminal domain AC609_13575 PF00575 S1 RNA binding domain AC609_13575 PF13184 NusA-like KH domain AC609_13580 PF17384 RimP C-terminal SH3 domain AC609_13580 PF02576 RimP N-terminal domain AC609_13590 PF00361 Proton-conducting membrane transporter AC609_13595 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus AC609_13595 PF00361 Proton-conducting membrane transporter AC609_13600 PF00361 Proton-conducting membrane transporter AC609_13600 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AC609_13605 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AC609_13610 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AC609_13615 PF12838 4Fe-4S dicluster domain AC609_13620 PF00146 NADH dehydrogenase AC609_13625 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal AC609_13625 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AC609_13625 PF00384 Molybdopterin oxidoreductase AC609_13630 PF10531 SLBB domain AC609_13630 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AC609_13630 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AC609_13640 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AC609_13645 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AC609_13650 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AC609_13655 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AC609_13670 PF00121 Triosephosphate isomerase AC609_13675 PF00106 short chain dehydrogenase AC609_13690 PF00563 EAL domain AC609_13690 PF00990 Diguanylate cyclase, GGDEF domain AC609_13690 PF03707 Bacterial signalling protein N terminal repeat AC609_13710 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AC609_13710 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AC609_13710 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AC609_13710 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AC609_13715 PF17848 Acetyl-coA carboxylase zinc finger domain AC609_13715 PF01039 Carboxyl transferase domain AC609_13720 PF00290 Tryptophan synthase alpha chain AC609_13730 PF00291 Pyridoxal-phosphate dependent enzyme AC609_13735 PF03466 LysR substrate binding domain AC609_13735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC609_13740 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AC609_13745 PF01416 tRNA pseudouridine synthase AC609_13765 PF01118 Semialdehyde dehydrogenase, NAD binding domain AC609_13765 PF02774 Semialdehyde dehydrogenase, dimerisation domain AC609_13770 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AC609_13770 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AC609_13775 PF01264 Chorismate synthase AC609_13780 PF05175 Methyltransferase small domain AC609_13785 PF02630 SCO1/SenC AC609_13790 PF02666 Phosphatidylserine decarboxylase AC609_13800 PF05872 Bacterial protein of unknown function (DUF853) AC609_13820 PF03449 Transcription elongation factor, N-terminal AC609_13820 PF01272 Transcription elongation factor, GreA/GreB, C-term AC609_13825 PF04055 Radical SAM superfamily AC609_13825 PF00919 Uncharacterized protein family UPF0004 AC609_13825 PF18693 TRAM domain AC609_13830 PF01738 Dienelactone hydrolase family AC609_13850 PF00692 dUTPase AC609_13855 PF10609 NUBPL iron-transfer P-loop NTPase AC609_13860 PF07715 TonB-dependent Receptor Plug Domain AC609_13860 PF00593 TonB dependent receptor AC609_13890 PF05649 Peptidase family M13 AC609_13890 PF01431 Peptidase family M13 AC609_13915 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AC609_13915 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC609_13920 PF01266 FAD dependent oxidoreductase AC609_13925 PF04235 Protein of unknown function (DUF418) AC609_13930 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AC609_13935 PF00877 NlpC/P60 family AC609_13940 PF00877 NlpC/P60 family AC609_13955 PF00375 Sodium:dicarboxylate symporter family AC609_13960 PF00245 Alkaline phosphatase AC609_13965 PF09179 TilS substrate binding domain AC609_13965 PF01171 PP-loop family AC609_13965 PF11734 TilS substrate C-terminal domain AC609_13970 PF02609 Exonuclease VII small subunit AC609_13975 PF00348 Polyprenyl synthetase AC609_13980 PF14521 Lysine-specific metallo-endopeptidase AC609_13990 PF01523 Putative modulator of DNA gyrase AC609_13995 PF04751 Protein of unknown function (DUF615) AC609_14000 PF01523 Putative modulator of DNA gyrase AC609_14010 PF13116 Protein of unknown function AC609_14010 PF13502 AsmA-like C-terminal region AC609_14015 PF10150 Ribonuclease E/G family AC609_14015 PF00575 S1 RNA binding domain AC609_14020 PF02545 Maf-like protein AC609_14025 PF04402 Protein of unknown function (DUF541) AC609_14040 PF02590 Predicted SPOUT methyltransferase AC609_14055 PF01467 Cytidylyltransferase-like AC609_14070 PF00133 tRNA synthetases class I (I, L, M and V) AC609_14070 PF13603 Leucyl-tRNA synthetase, Domain 2 AC609_14070 PF08264 Anticodon-binding domain of tRNA AC609_14080 PF00085 Thioredoxin AC609_14100 PF07043 Protein of unknown function (DUF1328) AC609_14105 PF04070 Domain of unknown function (DUF378) AC609_14110 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AC609_14120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC609_14120 PF03466 LysR substrate binding domain AC609_14125 PF01022 Bacterial regulatory protein, arsR family AC609_14160 PF00005 ABC transporter AC609_14160 PF00664 ABC transporter transmembrane region AC609_14170 PF00873 AcrB/AcrD/AcrF family AC609_14185 PF02321 Outer membrane efflux protein AC609_14190 PF00486 Transcriptional regulatory protein, C terminal AC609_14190 PF00072 Response regulator receiver domain AC609_14195 PF00512 His Kinase A (phospho-acceptor) domain AC609_14195 PF00672 HAMP domain AC609_14195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC609_14200 PF00999 Sodium/hydrogen exchanger family AC609_14205 PF00144 Beta-lactamase AC609_14210 PF03737 Aldolase/RraA AC609_14225 PF00990 Diguanylate cyclase, GGDEF domain AC609_14225 PF00072 Response regulator receiver domain AC609_14230 PF00849 RNA pseudouridylate synthase AC609_14230 PF01479 S4 domain AC609_14235 PF08448 PAS fold AC609_14235 PF00990 Diguanylate cyclase, GGDEF domain AC609_14235 PF00563 EAL domain AC609_14240 PF00270 DEAD/DEAH box helicase AC609_14240 PF03880 DbpA RNA binding domain AC609_14240 PF00271 Helicase conserved C-terminal domain AC609_14245 PF04542 Sigma-70 region 2 AC609_14245 PF08281 Sigma-70, region 4 AC609_14280 PF00730 HhH-GPD superfamily base excision DNA repair protein AC609_14280 PF06029 AlkA N-terminal domain AC609_14285 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AC609_14285 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AC609_14295 PF00654 Voltage gated chloride channel AC609_14300 PF08240 Alcohol dehydrogenase GroES-like domain AC609_14300 PF00107 Zinc-binding dehydrogenase AC609_14315 PF07715 TonB-dependent Receptor Plug Domain AC609_14315 PF00593 TonB dependent receptor AC609_14340 PF01483 Proprotein convertase P-domain AC609_14340 PF00082 Subtilase family AC609_14350 PF00082 Subtilase family AC609_14350 PF01483 Proprotein convertase P-domain AC609_14360 PF00248 Aldo/keto reductase family AC609_14365 PF07690 Major Facilitator Superfamily AC609_14370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC609_14370 PF03466 LysR substrate binding domain AC609_14380 PF06719 AraC-type transcriptional regulator N-terminus AC609_14380 PF12833 Helix-turn-helix domain AC609_14390 PF16859 Tetracyclin repressor-like, C-terminal domain AC609_14390 PF00440 Bacterial regulatory proteins, tetR family AC609_14395 PF02321 Outer membrane efflux protein AC609_14400 PF00873 AcrB/AcrD/AcrF family AC609_14405 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AC609_14405 PF00529 HlyD membrane-fusion protein of T1SS AC609_14415 PF01475 Ferric uptake regulator family AC609_14420 PF00749 tRNA synthetases class I (E and Q), catalytic domain AC609_14445 PF06123 Inner membrane protein CreD AC609_14465 PF00072 Response regulator receiver domain AC609_14465 PF00486 Transcriptional regulatory protein, C terminal AC609_14470 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AC609_14490 PF17757 UvrB interaction domain AC609_14490 PF03461 TRCF domain AC609_14490 PF00270 DEAD/DEAH box helicase AC609_14490 PF02559 CarD-like/TRCF domain AC609_14490 PF00271 Helicase conserved C-terminal domain AC609_14500 PF01627 Hpt domain AC609_14500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC609_14500 PF02895 Signal transducing histidine kinase, homodimeric domain AC609_14500 PF09078 CheY binding AC609_14500 PF01584 CheW-like domain AC609_14505 PF02203 Tar ligand binding domain homologue AC609_14505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC609_14505 PF00672 HAMP domain AC609_14510 PF01584 CheW-like domain AC609_14515 PF00990 Diguanylate cyclase, GGDEF domain AC609_14515 PF13426 PAS domain AC609_14515 PF00563 EAL domain AC609_14520 PF03705 CheR methyltransferase, all-alpha domain AC609_14520 PF01739 CheR methyltransferase, SAM binding domain AC609_14525 PF01339 CheB methylesterase AC609_14525 PF00072 Response regulator receiver domain AC609_14535 PF05649 Peptidase family M13 AC609_14535 PF01431 Peptidase family M13 AC609_14545 PF00300 Histidine phosphatase superfamily (branch 1) AC609_14550 PF04493 Endonuclease V AC609_14565 PF02678 Pirin AC609_14565 PF05726 Pirin C-terminal cupin domain AC609_14580 PF05726 Pirin C-terminal cupin domain AC609_14580 PF02678 Pirin AC609_14585 PF13722 5TM C-terminal transporter carbon starvation CstA AC609_14585 PF02554 Carbon starvation protein CstA AC609_14590 PF04328 Selenoprotein, putative AC609_14600 PF12796 Ankyrin repeats (3 copies) AC609_14635 PF13478 XdhC Rossmann domain AC609_14635 PF02625 XdhC and CoxI family AC609_14640 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AC609_14640 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AC609_14645 PF03450 CO dehydrogenase flavoprotein C-terminal domain AC609_14645 PF00941 FAD binding domain in molybdopterin dehydrogenase AC609_14650 PF01799 [2Fe-2S] binding domain AC609_14650 PF00111 2Fe-2S iron-sulfur cluster binding domain AC609_14650 PF10518 TAT (twin-arginine translocation) pathway signal sequence AC609_14655 PF00109 Beta-ketoacyl synthase, N-terminal domain AC609_14655 PF08240 Alcohol dehydrogenase GroES-like domain AC609_14655 PF00698 Acyl transferase domain AC609_14655 PF14765 Polyketide synthase dehydratase AC609_14655 PF16197 Ketoacyl-synthetase C-terminal extension AC609_14655 PF00550 Phosphopantetheine attachment site AC609_14655 PF08659 KR domain AC609_14655 PF02801 Beta-ketoacyl synthase, C-terminal domain AC609_14655 PF00107 Zinc-binding dehydrogenase AC609_14660 PF00563 EAL domain AC609_14660 PF00360 Phytochrome region AC609_14660 PF00990 Diguanylate cyclase, GGDEF domain AC609_14660 PF01590 GAF domain AC609_14665 PF00436 Single-strand binding protein family AC609_14670 PF00348 Polyprenyl synthetase AC609_14680 PF02875 Mur ligase family, glutamate ligase domain AC609_14680 PF08245 Mur ligase middle domain AC609_14695 PF00696 Amino acid kinase family AC609_14695 PF01842 ACT domain AC609_14700 PF02567 Phenazine biosynthesis-like protein AC609_14705 PF02567 Phenazine biosynthesis-like protein AC609_14715 PF02566 OsmC-like protein AC609_14720 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AC609_14720 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AC609_14725 PF03652 Holliday junction resolvase AC609_14730 PF02622 Uncharacterized ACR, COG1678 AC609_14735 PF13687 Domain of unknown function (DUF4153) AC609_14740 PF13673 Acetyltransferase (GNAT) domain AC609_14740 PF13302 Acetyltransferase (GNAT) domain AC609_14740 PF03352 Methyladenine glycosylase AC609_14740 PF00117 Glutamine amidotransferase class-I AC609_14740 PF00958 GMP synthase C terminal domain AC609_14755 PF00437 Type II/IV secretion system protein AC609_14760 PF00437 Type II/IV secretion system protein AC609_14765 PF01168 Alanine racemase, N-terminal domain AC609_14770 PF03807 NADP oxidoreductase coenzyme F420-dependent AC609_14770 PF14748 Pyrroline-5-carboxylate reductase dimerisation AC609_14780 PF01551 Peptidase family M23 AC609_14800 PF01965 DJ-1/PfpI family AC609_14810 PF02082 Transcriptional regulator AC609_14815 PF01458 Uncharacterized protein family (UPF0051) AC609_14820 PF00005 ABC transporter AC609_14825 PF01458 Uncharacterized protein family (UPF0051) AC609_14830 PF00266 Aminotransferase class-V AC609_14835 PF00583 Acetyltransferase (GNAT) family AC609_14840 PF00355 Rieske [2Fe-2S] domain AC609_14845 PF07715 TonB-dependent Receptor Plug Domain AC609_14845 PF00593 TonB dependent receptor AC609_14850 PF13640 2OG-Fe(II) oxygenase superfamily AC609_14850 PF18331 PKHD-type hydroxylase C-terminal domain AC609_14875 PF00872 Transposase, Mutator family AC609_14880 PF02424 ApbE family AC609_14885 PF00667 FAD binding domain AC609_14885 PF00175 Oxidoreductase NAD-binding domain AC609_14885 PF00258 Flavodoxin AC609_14890 PF05962 HutD AC609_14910 PF01636 Phosphotransferase enzyme family AC609_14915 PF00483 Nucleotidyl transferase AC609_14920 PF00308 Bacterial dnaA protein AC609_14925 PF01594 AI-2E family transporter AC609_14935 PF00586 AIR synthase related protein, N-terminal domain AC609_14935 PF02769 AIR synthase related protein, C-terminal domain AC609_14950 PF00551 Formyl transferase AC609_14970 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AC609_14975 PF01722 BolA-like protein AC609_14980 PF00571 CBS domain AC609_14980 PF01380 SIS domain AC609_14995 PF03968 OstA-like protein AC609_15000 PF00005 ABC transporter AC609_15005 PF04552 Sigma-54, DNA binding domain AC609_15005 PF04963 Sigma-54 factor, core binding domain AC609_15005 PF00309 Sigma-54 factor, Activator interacting domain (AID) AC609_15010 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AC609_15015 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AC609_15020 PF02603 HPr Serine kinase N terminus AC609_15020 PF07475 HPr Serine kinase C-terminal domain AC609_15025 PF03668 P-loop ATPase protein family AC609_15035 PF00381 PTS HPr component phosphorylation site AC609_15050 PF03448 MgtE intracellular N domain AC609_15050 PF00571 CBS domain AC609_15050 PF01769 Divalent cation transporter AC609_15055 PF00756 Putative esterase AC609_15060 PF02322 Cytochrome bd terminal oxidase subunit II AC609_15095 PF03743 Bacterial conjugation TrbI-like protein AC609_15120 PF03377 TAL effector repeat AC609_15125 PF13406 Transglycosylase SLT domain AC609_15130 PF01526 Tn3 transposase DDE domain AC609_15130 PF13700 Domain of unknown function (DUF4158) AC609_15190 PF01654 Cytochrome bd terminal oxidase subunit I AC609_15200 PF00324 Amino acid permease AC609_15205 PF00544 Pectate lyase AC609_15210 PF01527 Transposase AC609_15215 PF13683 Integrase core domain AC609_15215 PF13276 HTH-like domain AC609_15230 PF00561 alpha/beta hydrolase fold AC609_15235 PF00196 Bacterial regulatory proteins, luxR family AC609_15240 PF00324 Amino acid permease AC609_15260 PF12706 Beta-lactamase superfamily domain AC609_15295 PF00376 MerR family regulatory protein AC609_15295 PF09278 MerR, DNA binding AC609_15300 PF07690 Major Facilitator Superfamily AC609_15305 PF03738 Glutathionylspermidine synthase preATP-grasp AC609_15330 PF04012 PspA/IM30 family AC609_15340 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AC609_15340 PF01243 Pyridoxamine 5'-phosphate oxidase AC609_15345 PF01202 Shikimate kinase AC609_15350 PF01761 3-dehydroquinate synthase AC609_15360 PF01208 Uroporphyrinogen decarboxylase (URO-D) AC609_15365 PF07690 Major Facilitator Superfamily AC609_15370 PF00072 Response regulator receiver domain AC609_15370 PF01627 Hpt domain AC609_15370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC609_15370 PF00512 His Kinase A (phospho-acceptor) domain AC609_15370 PF00672 HAMP domain AC609_15370 PF17149 Periplasmic sensor domain found in signal transduction proteins AC609_15375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC609_15375 PF00512 His Kinase A (phospho-acceptor) domain AC609_15375 PF17149 Periplasmic sensor domain found in signal transduction proteins AC609_15375 PF01627 Hpt domain AC609_15375 PF00672 HAMP domain AC609_15375 PF00072 Response regulator receiver domain AC609_15380 PF00512 His Kinase A (phospho-acceptor) domain AC609_15380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC609_15380 PF00672 HAMP domain AC609_15380 PF01627 Hpt domain AC609_15380 PF00072 Response regulator receiver domain AC609_15380 PF17149 Periplasmic sensor domain found in signal transduction proteins AC609_15390 PF00072 Response regulator receiver domain AC609_15390 PF01627 Hpt domain AC609_15390 PF00512 His Kinase A (phospho-acceptor) domain AC609_15390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC609_15395 PF04264 YceI-like domain AC609_15415 PF03315 Serine dehydratase beta chain AC609_15415 PF03313 Serine dehydratase alpha chain AC609_15420 PF00041 Fibronectin type III domain AC609_15420 PF00553 Cellulose binding domain AC609_15420 PF00704 Glycosyl hydrolases family 18 AC609_15425 PF00742 Homoserine dehydrogenase AC609_15425 PF03447 Homoserine dehydrogenase, NAD binding domain AC609_15425 PF00696 Amino acid kinase family AC609_15430 PF01053 Cys/Met metabolism PLP-dependent enzyme AC609_15435 PF00561 alpha/beta hydrolase fold AC609_15440 PF01551 Peptidase family M23 AC609_15440 PF01476 LysM domain AC609_15440 PF08525 Opacity-associated protein A N-terminal motif AC609_15445 PF16658 Class II release factor RF3, C-terminal domain AC609_15445 PF00009 Elongation factor Tu GTP binding domain AC609_15450 PF03006 Haemolysin-III related AC609_15455 PF05170 AsmA family AC609_15460 PF00478 IMP dehydrogenase / GMP reductase domain AC609_15460 PF00571 CBS domain AC609_15465 PF00535 Glycosyl transferase family 2 AC609_15470 PF00912 Transglycosylase AC609_15475 PF01430 Hsp33 protein AC609_15485 PF00593 TonB dependent receptor AC609_15485 PF07715 TonB-dependent Receptor Plug Domain AC609_15490 PF00440 Bacterial regulatory proteins, tetR family AC609_15500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC609_15500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AC609_15500 PF09317 Domain of unknown function (DUF1974) AC609_15525 PF00872 Transposase, Mutator family AC609_15545 PF01597 Glycine cleavage H-protein AC609_15550 PF08669 Glycine cleavage T-protein C-terminal barrel domain AC609_15550 PF01571 Aminomethyltransferase folate-binding domain AC609_15560 PF01145 SPFH domain / Band 7 family AC609_15560 PF16200 C-terminal region of band_7 AC609_15565 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AC609_15575 PF00459 Inositol monophosphatase family AC609_15580 PF00293 NUDIX domain AC609_15585 PF00202 Aminotransferase class-III AC609_15590 PF04452 RNA methyltransferase AC609_15595 PF02685 Glucokinase AC609_15625 PF00704 Glycosyl hydrolases family 18 AC609_15625 PF01476 LysM domain AC609_15630 PF07691 PA14 domain AC609_15630 PF02838 Glycosyl hydrolase family 20, domain 2 AC609_15630 PF00728 Glycosyl hydrolase family 20, catalytic domain AC609_15640 PF07691 PA14 domain AC609_15640 PF00933 Glycosyl hydrolase family 3 N terminal domain AC609_15640 PF14310 Fibronectin type III-like domain AC609_15640 PF01915 Glycosyl hydrolase family 3 C-terminal domain AC609_15650 PF17678 Glycosyl hydrolase family 92 N-terminal domain AC609_15650 PF07971 Glycosyl hydrolase family 92 AC609_15655 PF01301 Glycosyl hydrolases family 35 AC609_15685 PF03932 CutC family AC609_15690 PF01112 Asparaginase AC609_15700 PF13302 Acetyltransferase (GNAT) domain AC609_15715 PF00072 Response regulator receiver domain AC609_15715 PF01584 CheW-like domain AC609_15715 PF01627 Hpt domain AC609_15715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC609_15720 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AC609_15720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC609_15730 PF00072 Response regulator receiver domain AC609_15735 PF00072 Response regulator receiver domain AC609_15740 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AC609_15740 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AC609_15750 PF03747 ADP-ribosylglycohydrolase AC609_15755 PF00814 Glycoprotease family AC609_15765 PF13307 Helicase C-terminal domain AC609_15765 PF04851 Type III restriction enzyme, res subunit AC609_15775 PF00912 Transglycosylase AC609_15775 PF00905 Penicillin binding protein transpeptidase domain AC609_15775 PF14814 Bifunctional transglycosylase second domain AC609_15780 PF00535 Glycosyl transferase family 2 AC609_15790 PF02824 TGS domain AC609_15790 PF04607 Region found in RelA / SpoT proteins AC609_15790 PF13291 ACT domain AC609_15795 PF12706 Beta-lactamase superfamily domain AC609_15800 PF03070 TENA/THI-4/PQQC family AC609_15805 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AC609_15810 PF04055 Radical SAM superfamily AC609_15810 PF13186 Iron-sulfur cluster-binding domain AC609_15825 PF02685 Glucokinase AC609_15835 PF00872 Transposase, Mutator family AC609_15845 PF11898 Domain of unknown function (DUF3418) AC609_15845 PF00270 DEAD/DEAH box helicase AC609_15845 PF04408 Helicase associated domain (HA2) AC609_15845 PF00271 Helicase conserved C-terminal domain AC609_15845 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AC609_15850 PF00210 Ferritin-like domain AC609_15855 PF16124 RecQ zinc-binding AC609_15855 PF09382 RQC domain AC609_15855 PF00270 DEAD/DEAH box helicase AC609_15855 PF00271 Helicase conserved C-terminal domain AC609_15855 PF00570 HRDC domain AC609_15910 PF00672 HAMP domain AC609_15910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC609_15910 PF02203 Tar ligand binding domain homologue AC609_15930 PF07536 HWE histidine kinase AC609_15930 PF13426 PAS domain AC609_15930 PF13581 Histidine kinase-like ATPase domain AC609_15935 PF06508 Queuosine biosynthesis protein QueC AC609_15945 PF04055 Radical SAM superfamily AC609_15955 PF00691 OmpA family AC609_15960 PF04052 TolB amino-terminal domain AC609_15960 PF07676 WD40-like Beta Propeller Repeat AC609_15970 PF02472 Biopolymer transport protein ExbD/TolR AC609_15975 PF01618 MotA/TolQ/ExbB proton channel family AC609_15980 PF03061 Thioesterase superfamily AC609_15985 PF05496 Holliday junction DNA helicase RuvB P-loop domain AC609_15985 PF05491 RuvB C-terminal winged helix domain AC609_15985 PF17864 RuvB AAA lid domain AC609_15995 PF02705 K+ potassium transporter AC609_16000 PF07499 RuvA, C-terminal domain AC609_16000 PF01330 RuvA N terminal domain AC609_16005 PF02075 Crossover junction endodeoxyribonuclease RuvC AC609_16010 PF01709 Transcriptional regulator AC609_16025 PF01336 OB-fold nucleic acid binding domain AC609_16025 PF02938 GAD domain AC609_16025 PF00152 tRNA synthetases class II (D, K and N) AC609_16040 PF07690 Major Facilitator Superfamily AC609_16050 PF04185 Phosphoesterase family AC609_16050 PF05506 Domain of unknown function (DUF756) AC609_16060 PF07859 alpha/beta hydrolase fold AC609_16060 PF13472 GDSL-like Lipase/Acylhydrolase family AC609_16070 PF03466 LysR substrate binding domain AC609_16070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC609_16080 PF12848 ABC transporter AC609_16080 PF00005 ABC transporter AC609_16085 PF00593 TonB dependent receptor AC609_16085 PF07715 TonB-dependent Receptor Plug Domain AC609_16095 PF00593 TonB dependent receptor AC609_16095 PF07715 TonB-dependent Receptor Plug Domain AC609_16100 PF07715 TonB-dependent Receptor Plug Domain AC609_16100 PF00593 TonB dependent receptor AC609_16110 PF02254 TrkA-N domain AC609_16110 PF00999 Sodium/hydrogen exchanger family AC609_16135 PF07660 Secretin and TonB N terminus short domain AC609_16135 PF07715 TonB-dependent Receptor Plug Domain AC609_16135 PF00593 TonB dependent receptor AC609_16145 PF06276 Ferric iron reductase FhuF-like transporter AC609_16145 PF04183 IucA / IucC family AC609_16150 PF07690 Major Facilitator Superfamily AC609_16160 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AC609_16160 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AC609_16175 PF02654 Cobalamin-5-phosphate synthase AC609_16185 PF02277 Phosphoribosyltransferase AC609_16190 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AC609_16195 PF07685 CobB/CobQ-like glutamine amidotransferase domain AC609_16195 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AC609_16200 PF00155 Aminotransferase class I and II AC609_16205 PF03186 CobD/Cbib protein AC609_16205 PF17113 Regulatory signalling modulator protein AmpE AC609_16210 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AC609_16210 PF12557 Cob(I)alamin adenosyltransferase N terminal AC609_16225 PF07715 TonB-dependent Receptor Plug Domain AC609_16225 PF00593 TonB dependent receptor AC609_16235 PF10431 C-terminal, D2-small domain, of ClpB protein AC609_16235 PF02861 Clp amino terminal domain, pathogenicity island component AC609_16235 PF17871 AAA lid domain AC609_16235 PF07724 AAA domain (Cdc48 subfamily) AC609_16235 PF00004 ATPase family associated with various cellular activities (AAA) AC609_16245 PF01541 GIY-YIG catalytic domain AC609_16280 PF07715 TonB-dependent Receptor Plug Domain AC609_16280 PF00593 TonB dependent receptor AC609_16285 PF02358 Trehalose-phosphatase AC609_16290 PF00723 Glycosyl hydrolases family 15 AC609_16295 PF00982 Glycosyltransferase family 20 AC609_16300 PF01011 PQQ enzyme repeat AC609_16320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC609_16320 PF00672 HAMP domain AC609_16320 PF02203 Tar ligand binding domain homologue AC609_16325 PF04134 Protein of unknown function, DUF393 AC609_16340 PF00849 RNA pseudouridylate synthase AC609_16345 PF13525 Outer membrane lipoprotein AC609_16355 PF00795 Carbon-nitrogen hydrolase AC609_16355 PF02540 NAD synthase AC609_16370 PF00549 CoA-ligase AC609_16370 PF02629 CoA binding domain AC609_16375 PF00549 CoA-ligase AC609_16375 PF08442 ATP-grasp domain AC609_16380 PF00512 His Kinase A (phospho-acceptor) domain AC609_16380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC609_16390 PF00072 Response regulator receiver domain AC609_16390 PF02954 Bacterial regulatory protein, Fis family AC609_16390 PF00158 Sigma-54 interaction domain AC609_16395 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AC609_16395 PF00437 Type II/IV secretion system protein AC609_16400 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AC609_16400 PF00437 Type II/IV secretion system protein AC609_16405 PF07963 Prokaryotic N-terminal methylation motif AC609_16405 PF00114 Pilin (bacterial filament) AC609_16410 PF00114 Pilin (bacterial filament) AC609_16410 PF07963 Prokaryotic N-terminal methylation motif AC609_16415 PF00872 Transposase, Mutator family AC609_16420 PF00482 Type II secretion system (T2SS), protein F AC609_16425 PF06750 Bacterial Peptidase A24 N-terminal domain AC609_16425 PF01478 Type IV leader peptidase family AC609_16430 PF01121 Dephospho-CoA kinase AC609_16445 PF11808 Phosphate regulon sensor protein PhoR AC609_16445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC609_16445 PF00512 His Kinase A (phospho-acceptor) domain AC609_16445 PF00989 PAS fold AC609_16450 PF00486 Transcriptional regulatory protein, C terminal AC609_16450 PF00072 Response regulator receiver domain AC609_16460 PF08443 RimK-like ATP-grasp domain AC609_16460 PF18030 RimK PreATP-grasp domain AC609_16465 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AC609_16465 PF00128 Alpha amylase, catalytic domain AC609_16485 PF01527 Transposase AC609_16490 PF13333 Integrase core domain AC609_16490 PF00665 Integrase core domain AC609_16490 PF13276 HTH-like domain AC609_16500 PF04002 RadC-like JAB domain AC609_16520 PF05598 Transposase domain (DUF772) AC609_16520 PF01609 Transposase DDE domain AC609_16525 PF00872 Transposase, Mutator family AC609_16535 PF00872 Transposase, Mutator family AC609_16565 PF11799 impB/mucB/samB family C-terminal domain AC609_16565 PF13438 Domain of unknown function (DUF4113) AC609_16565 PF00817 impB/mucB/samB family AC609_16570 PF00717 Peptidase S24-like AC609_16590 PF13614 AAA domain AC609_16655 PF01131 DNA topoisomerase AC609_16655 PF01751 Toprim domain AC609_16660 PF00145 C-5 cytosine-specific DNA methylase AC609_16715 PF06067 Domain of unknown function (DUF932) AC609_16745 PF00872 Transposase, Mutator family AC609_16875 PF00990 Diguanylate cyclase, GGDEF domain AC609_16875 PF08448 PAS fold AC609_16875 PF08447 PAS fold AC609_16875 PF00563 EAL domain AC609_16900 PF04610 TrbL/VirB6 plasmid conjugal transfer protein AC609_16970 PF03466 LysR substrate binding domain AC609_16970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC609_16990 PF13356 Arm DNA-binding domain AC609_16990 PF14659 Phage integrase, N-terminal SAM-like domain AC609_16990 PF00589 Phage integrase family AC609_17000 PF00657 GDSL-like Lipase/Acylhydrolase AC609_17000 PF03797 Autotransporter beta-domain AC609_17010 PF05690 Thiazole biosynthesis protein ThiG AC609_17015 PF02390 Putative methyltransferase AC609_17020 PF03600 Citrate transporter AC609_17020 PF02080 TrkA-C domain AC609_17040 PF01557 Fumarylacetoacetate (FAA) hydrolase family AC609_17045 PF01741 Large-conductance mechanosensitive channel, MscL AC609_17060 PF00356 Bacterial regulatory proteins, lacI family AC609_17070 PF00703 Glycosyl hydrolases family 2 AC609_17070 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain AC609_17070 PF02837 Glycosyl hydrolases family 2, sugar binding domain AC609_17075 PF10566 Glycoside hydrolase 97 AC609_17075 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation AC609_17075 PF14508 Glycosyl-hydrolase 97 N-terminal AC609_17080 PF00135 Carboxylesterase family AC609_17085 PF00588 SpoU rRNA Methylase family AC609_17085 PF08032 RNA 2'-O ribose methyltransferase substrate binding AC609_17095 PF01433 Peptidase family M1 domain AC609_17095 PF11838 ERAP1-like C-terminal domain AC609_17100 PF00873 AcrB/AcrD/AcrF family AC609_17105 PF00529 HlyD membrane-fusion protein of T1SS AC609_17105 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AC609_17110 PF00009 Elongation factor Tu GTP binding domain AC609_17115 PF01507 Phosphoadenosine phosphosulfate reductase family AC609_17120 PF00667 FAD binding domain AC609_17120 PF00258 Flavodoxin AC609_17120 PF00175 Oxidoreductase NAD-binding domain AC609_17125 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AC609_17125 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AC609_17130 PF01507 Phosphoadenosine phosphosulfate reductase family AC609_17150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC609_17150 PF01627 Hpt domain AC609_17150 PF00512 His Kinase A (phospho-acceptor) domain AC609_17150 PF00072 Response regulator receiver domain AC609_17160 PF03466 LysR substrate binding domain AC609_17160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC609_17165 PF10414 Sirohaem synthase dimerisation region AC609_17165 PF14824 Sirohaem biosynthesis protein central AC609_17165 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AC609_17170 PF00291 Pyridoxal-phosphate dependent enzyme AC609_17180 PF01661 Macro domain AC609_17185 PF00274 Fructose-bisphosphate aldolase class-I AC609_17190 PF00224 Pyruvate kinase, barrel domain AC609_17190 PF02887 Pyruvate kinase, alpha/beta domain AC609_17200 PF00162 Phosphoglycerate kinase AC609_17230 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AC609_17230 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AC609_17240 PF03922 OmpW family AC609_17255 PF00753 Metallo-beta-lactamase superfamily AC609_17255 PF04273 Putative phosphatase (DUF442) AC609_17265 PF00528 Binding-protein-dependent transport system inner membrane component AC609_17270 PF03459 TOBE domain AC609_17270 PF00005 ABC transporter AC609_17290 PF08521 Two-component sensor kinase N-terminal AC609_17290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC609_17290 PF00512 His Kinase A (phospho-acceptor) domain AC609_17295 PF00486 Transcriptional regulatory protein, C terminal AC609_17295 PF00072 Response regulator receiver domain AC609_17315 PF00501 AMP-binding enzyme AC609_17340 PF03734 L,D-transpeptidase catalytic domain AC609_17340 PF01476 LysM domain AC609_17345 PF01551 Peptidase family M23 AC609_17345 PF04225 Opacity-associated protein A LysM-like domain AC609_17365 PF02780 Transketolase, C-terminal domain AC609_17365 PF02779 Transketolase, pyrimidine binding domain AC609_17365 PF00456 Transketolase, thiamine diphosphate binding domain AC609_17370 PF00375 Sodium:dicarboxylate symporter family AC609_17380 PF07584 Aerotolerance regulator N-terminal AC609_17380 PF00092 von Willebrand factor type A domain AC609_17400 PF17863 AAA lid domain AC609_17400 PF07726 ATPase family associated with various cellular activities (AAA) AC609_17405 PF11741 AMIN domain AC609_17405 PF00263 Bacterial type II and III secretion system protein AC609_17405 PF07660 Secretin and TonB N terminus short domain AC609_17405 PF03958 Bacterial type II/III secretion system short domain AC609_17430 PF00905 Penicillin binding protein transpeptidase domain AC609_17430 PF17092 Penicillin-binding protein OB-like domain AC609_17430 PF00912 Transglycosylase AC609_17440 PF00285 Citrate synthase, C-terminal domain AC609_17445 PF01197 Ribosomal protein L31 AC609_17450 PF01156 Inosine-uridine preferring nucleoside hydrolase AC609_17455 PF00271 Helicase conserved C-terminal domain AC609_17455 PF00270 DEAD/DEAH box helicase AC609_17455 PF17191 RecG wedge domain AC609_17460 PF01042 Endoribonuclease L-PSP AC609_17465 PF13291 ACT domain AC609_17465 PF02824 TGS domain AC609_17465 PF04607 Region found in RelA / SpoT proteins AC609_17470 PF01192 RNA polymerase Rpb6 AC609_17475 PF00625 Guanylate kinase AC609_17480 PF03755 YicC-like family, N-terminal region AC609_17480 PF08340 Domain of unknown function (DUF1732) AC609_17485 PF03725 3' exoribonuclease family, domain 2 AC609_17485 PF01138 3' exoribonuclease family, domain 1 AC609_17495 PF01725 Ham1 family AC609_17500 PF06969 HemN C-terminal domain AC609_17500 PF04055 Radical SAM superfamily AC609_17515 PF00557 Metallopeptidase family M24 AC609_17525 PF00557 Metallopeptidase family M24 AC609_17525 PF05195 Aminopeptidase P, N-terminal domain AC609_17530 PF03695 Uncharacterised protein family (UPF0149) AC609_17540 PF05164 Cell division protein ZapA AC609_17545 PF01812 5-formyltetrahydrofolate cyclo-ligase family AC609_17555 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AC609_17565 PF13369 Transglutaminase-like superfamily AC609_17570 PF00301 Rubredoxin AC609_17575 PF02581 Thiamine monophosphate synthase AC609_17600 PF00202 Aminotransferase class-III AC609_17605 PF17874 MalT-like TPR region AC609_17605 PF00196 Bacterial regulatory proteins, luxR family AC609_17610 PF00127 Copper binding proteins, plastocyanin/azurin family AC609_17615 PF00155 Aminotransferase class I and II AC609_17625 PF00034 Cytochrome c AC609_17625 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AC609_17630 PF01593 Flavin containing amine oxidoreductase AC609_17645 PF00202 Aminotransferase class-III AC609_17650 PF00520 Ion transport protein AC609_17650 PF00027 Cyclic nucleotide-binding domain AC609_17665 PF01569 PAP2 superfamily AC609_17670 PF01062 Bestrophin, RFP-TM, chloride channel AC609_17680 PF01225 Mur ligase family, catalytic domain AC609_17680 PF02875 Mur ligase family, glutamate ligase domain AC609_17680 PF08245 Mur ligase middle domain AC609_17690 PF00365 Phosphofructokinase AC609_17700 PF03030 Inorganic H+ pyrophosphatase AC609_17710 PF00719 Inorganic pyrophosphatase AC609_17720 PF00593 TonB dependent receptor AC609_17720 PF07715 TonB-dependent Receptor Plug Domain AC609_17725 PF12833 Helix-turn-helix domain AC609_17730 PF00486 Transcriptional regulatory protein, C terminal AC609_17730 PF18500 CadC C-terminal domain 1 AC609_17735 PF01964 Radical SAM ThiC family AC609_17735 PF13667 ThiC-associated domain AC609_17740 PF07715 TonB-dependent Receptor Plug Domain AC609_17740 PF00593 TonB dependent receptor AC609_17745 PF00672 HAMP domain AC609_17745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC609_17745 PF02203 Tar ligand binding domain homologue AC609_17755 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AC609_17755 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AC609_17760 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AC609_17760 PF00205 Thiamine pyrophosphate enzyme, central domain AC609_17760 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AC609_17770 PF00291 Pyridoxal-phosphate dependent enzyme AC609_17775 PF00682 HMGL-like AC609_17775 PF08502 LeuA allosteric (dimerisation) domain AC609_17780 PF00180 Isocitrate/isopropylmalate dehydrogenase AC609_17785 PF00694 Aconitase C-terminal domain AC609_17790 PF00330 Aconitase family (aconitate hydratase) AC609_17795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC609_17815 PF02321 Outer membrane efflux protein AC609_17820 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AC609_17825 PF03279 Bacterial lipid A biosynthesis acyltransferase AC609_17850 PF01515 Phosphate acetyl/butaryl transferase AC609_17850 PF00390 Malic enzyme, N-terminal domain AC609_17850 PF03949 Malic enzyme, NAD binding domain AC609_17855 PF00375 Sodium:dicarboxylate symporter family AC609_17865 PF00512 His Kinase A (phospho-acceptor) domain AC609_17865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC609_17865 PF02743 Cache domain AC609_17870 PF07690 Major Facilitator Superfamily AC609_17880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC609_17880 PF03466 LysR substrate binding domain AC609_17890 PF00248 Aldo/keto reductase family AC609_17905 PF00072 Response regulator receiver domain AC609_17905 PF00196 Bacterial regulatory proteins, luxR family AC609_17915 PF08521 Two-component sensor kinase N-terminal AC609_17915 PF00512 His Kinase A (phospho-acceptor) domain AC609_17915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC609_17920 PF00486 Transcriptional regulatory protein, C terminal AC609_17920 PF00072 Response regulator receiver domain AC609_17930 PF03600 Citrate transporter AC609_17935 PF00106 short chain dehydrogenase AC609_17940 PF00356 Bacterial regulatory proteins, lacI family AC609_17955 PF00128 Alpha amylase, catalytic domain AC609_17970 PF03193 RsgA GTPase AC609_17975 PF00155 Aminotransferase class I and II AC609_17990 PF01522 Polysaccharide deacetylase AC609_17995 PF00462 Glutaredoxin AC609_18010 PF01979 Amidohydrolase family AC609_18015 PF01979 Amidohydrolase family AC609_18040 PF00872 Transposase, Mutator family AC609_18050 PF02645 Uncharacterised protein, DegV family COG1307 AC609_18060 PF01527 Transposase AC609_18065 PF13333 Integrase core domain AC609_18065 PF13276 HTH-like domain AC609_18065 PF00665 Integrase core domain AC609_18070 PF00756 Putative esterase AC609_18075 PF04828 Glutathione-dependent formaldehyde-activating enzyme AC609_18080 PF00107 Zinc-binding dehydrogenase AC609_18080 PF08240 Alcohol dehydrogenase GroES-like domain AC609_18085 PF02583 Metal-sensitive transcriptional repressor AC609_18100 PF00486 Transcriptional regulatory protein, C terminal AC609_18100 PF00072 Response regulator receiver domain AC609_18105 PF00672 HAMP domain AC609_18105 PF00512 His Kinase A (phospho-acceptor) domain AC609_18105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC609_18115 PF04107 Glutamate-cysteine ligase family 2(GCS2) AC609_18125 PF01926 50S ribosome-binding GTPase AC609_18130 PF00034 Cytochrome c AC609_18140 PF01323 DSBA-like thioredoxin domain AC609_18150 PF02028 BCCT, betaine/carnitine/choline family transporter AC609_18155 PF00171 Aldehyde dehydrogenase family AC609_18160 PF00732 GMC oxidoreductase AC609_18160 PF05199 GMC oxidoreductase AC609_18165 PF00544 Pectate lyase AC609_18185 PF01066 CDP-alcohol phosphatidyltransferase AC609_18195 PF03129 Anticodon binding domain AC609_18195 PF04073 Aminoacyl-tRNA editing domain AC609_18195 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AC609_18200 PF00816 H-NS histone family AC609_18210 PF02405 Permease MlaE AC609_18215 PF00005 ABC transporter AC609_18220 PF03886 ABC-type transport auxiliary lipoprotein component AC609_18220 PF02470 MlaD protein AC609_18240 PF01144 Coenzyme A transferase AC609_18245 PF01144 Coenzyme A transferase AC609_18250 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AC609_18250 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AC609_18250 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AC609_18250 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AC609_18255 PF01050 Mannose-6-phosphate isomerase AC609_18255 PF00483 Nucleotidyl transferase AC609_18260 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AC609_18260 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AC609_18260 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AC609_18265 PF04321 RmlD substrate binding domain AC609_18270 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AC609_18275 PF00483 Nucleotidyl transferase AC609_18280 PF16363 GDP-mannose 4,6 dehydratase AC609_18285 PF01012 Electron transfer flavoprotein domain AC609_18290 PF01012 Electron transfer flavoprotein domain AC609_18290 PF00766 Electron transfer flavoprotein FAD-binding domain AC609_18300 PF01040 UbiA prenyltransferase family AC609_18305 PF01565 FAD binding domain AC609_18305 PF04030 D-arabinono-1,4-lactone oxidase AC609_18310 PF00106 short chain dehydrogenase AC609_18315 PF01370 NAD dependent epimerase/dehydratase family AC609_18350 PF16363 GDP-mannose 4,6 dehydratase AC609_18355 PF13477 Glycosyl transferase 4-like AC609_18355 PF00534 Glycosyl transferases group 1 AC609_18360 PF13847 Methyltransferase domain AC609_18360 PF00069 Protein kinase domain AC609_18365 PF00005 ABC transporter AC609_18395 PF01053 Cys/Met metabolism PLP-dependent enzyme AC609_18400 PF00291 Pyridoxal-phosphate dependent enzyme AC609_18400 PF00571 CBS domain AC609_18420 PF00437 Type II/IV secretion system protein AC609_18425 PF14497 Glutathione S-transferase, C-terminal domain AC609_18425 PF02798 Glutathione S-transferase, N-terminal domain AC609_18435 PF00271 Helicase conserved C-terminal domain AC609_18435 PF00270 DEAD/DEAH box helicase AC609_18440 PF01242 6-pyruvoyl tetrahydropterin synthase AC609_18460 PF13185 GAF domain AC609_18470 PF13419 Haloacid dehalogenase-like hydrolase AC609_18475 PF11799 impB/mucB/samB family C-terminal domain AC609_18475 PF00817 impB/mucB/samB family AC609_18480 PF07977 FabA-like domain AC609_18485 PF00109 Beta-ketoacyl synthase, N-terminal domain AC609_18485 PF02801 Beta-ketoacyl synthase, C-terminal domain AC609_18490 PF08239 Bacterial SH3 domain AC609_18500 PF01432 Peptidase family M3 AC609_18515 PF07732 Multicopper oxidase AC609_18515 PF07731 Multicopper oxidase AC609_18515 PF00394 Multicopper oxidase AC609_18520 PF05275 Copper resistance protein B precursor (CopB) AC609_18525 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AC609_18550 PF01380 SIS domain AC609_18555 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AC609_18560 PF00005 ABC transporter AC609_18565 PF00005 ABC transporter AC609_18565 PF12704 MacB-like periplasmic core domain AC609_18565 PF02687 FtsX-like permease family AC609_18570 PF00005 ABC transporter AC609_18570 PF02687 FtsX-like permease family AC609_18570 PF12704 MacB-like periplasmic core domain AC609_18580 PF00158 Sigma-54 interaction domain AC609_18580 PF00072 Response regulator receiver domain AC609_18580 PF02954 Bacterial regulatory protein, Fis family AC609_18585 PF00512 His Kinase A (phospho-acceptor) domain AC609_18585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC609_18590 PF12804 MobA-like NTP transferase domain AC609_18590 PF14602 Hexapeptide repeat of succinyl-transferase AC609_18590 PF00132 Bacterial transferase hexapeptide (six repeats) AC609_18600 PF01817 Chorismate mutase type II AC609_18605 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AC609_18605 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AC609_18610 PF02874 ATP synthase alpha/beta family, beta-barrel domain AC609_18610 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AC609_18615 PF00231 ATP synthase AC609_18620 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AC609_18620 PF02874 ATP synthase alpha/beta family, beta-barrel domain AC609_18620 PF00306 ATP synthase alpha/beta chain, C terminal domain AC609_18625 PF00213 ATP synthase delta (OSCP) subunit AC609_18630 PF00430 ATP synthase B/B' CF(0) AC609_18635 PF00137 ATP synthase subunit C AC609_18640 PF00119 ATP synthase A chain AC609_18660 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AC609_18660 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC609_18670 PF02817 e3 binding domain AC609_18670 PF00364 Biotin-requiring enzyme AC609_18670 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AC609_18705 PF03180 NLPA lipoprotein AC609_18710 PF00528 Binding-protein-dependent transport system inner membrane component AC609_18715 PF09383 NIL domain AC609_18715 PF00005 ABC transporter AC609_18720 PF00892 EamA-like transporter family AC609_18725 PF04461 Protein of unknown function (DUF520) AC609_18735 PF00512 His Kinase A (phospho-acceptor) domain AC609_18735 PF18415 Histidine kinase receptor ArcB trans-membrane domain AC609_18735 PF01627 Hpt domain AC609_18735 PF00989 PAS fold AC609_18735 PF00072 Response regulator receiver domain AC609_18735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC609_18760 PF13419 Haloacid dehalogenase-like hydrolase AC609_18765 PF01479 S4 domain AC609_18765 PF00849 RNA pseudouridylate synthase AC609_18770 PF05175 Methyltransferase small domain AC609_18770 PF08468 Methyltransferase small domain N-terminal AC609_18780 PF05598 Transposase domain (DUF772) AC609_18780 PF01609 Transposase DDE domain AC609_18785 PF00872 Transposase, Mutator family AC609_18790 PF07995 Glucose / Sorbosone dehydrogenase AC609_18800 PF00989 PAS fold AC609_18800 PF00512 His Kinase A (phospho-acceptor) domain AC609_18800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC609_18820 PF01168 Alanine racemase, N-terminal domain AC609_18820 PF00842 Alanine racemase, C-terminal domain AC609_18825 PF01266 FAD dependent oxidoreductase AC609_18830 PF01037 Lrp/AsnC ligand binding domain AC609_18840 PF01641 SelR domain AC609_18850 PF01618 MotA/TolQ/ExbB proton channel family AC609_18855 PF00691 OmpA family AC609_18855 PF13677 Membrane MotB of proton-channel complex MotA/MotB AC609_18880 PF01061 ABC-2 type transporter AC609_18885 PF00005 ABC transporter AC609_18890 PF00999 Sodium/hydrogen exchanger family AC609_18895 PF02469 Fasciclin domain AC609_18900 PF03167 Uracil DNA glycosylase superfamily AC609_18910 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AC609_18920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC609_18920 PF03466 LysR substrate binding domain AC609_18925 PF03358 NADPH-dependent FMN reductase AC609_18930 PF00248 Aldo/keto reductase family AC609_18940 PF01431 Peptidase family M13 AC609_18940 PF05649 Peptidase family M13 AC609_18955 PF13520 Amino acid permease AC609_18965 PF00072 Response regulator receiver domain AC609_18965 PF04397 LytTr DNA-binding domain AC609_18970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC609_18970 PF02743 Cache domain AC609_18970 PF06580 Histidine kinase AC609_18970 PF00672 HAMP domain AC609_18985 PF05974 Domain of unknown function (DUF892) AC609_18990 PF05067 Manganese containing catalase AC609_19010 PF08448 PAS fold AC609_19010 PF03705 CheR methyltransferase, all-alpha domain AC609_19010 PF01739 CheR methyltransferase, SAM binding domain AC609_19010 PF01339 CheB methylesterase AC609_19025 PF00072 Response regulator receiver domain AC609_19025 PF00158 Sigma-54 interaction domain AC609_19025 PF02954 Bacterial regulatory protein, Fis family AC609_19040 PF01654 Cytochrome bd terminal oxidase subunit I AC609_19045 PF02322 Cytochrome bd terminal oxidase subunit II AC609_19080 PF08240 Alcohol dehydrogenase GroES-like domain AC609_19080 PF13823 Alcohol dehydrogenase GroES-associated AC609_19080 PF00107 Zinc-binding dehydrogenase AC609_19090 PF00872 Transposase, Mutator family AC609_19140 PF00005 ABC transporter AC609_19150 PF03466 LysR substrate binding domain AC609_19150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC609_19155 PF01042 Endoribonuclease L-PSP AC609_19185 PF00916 Sulfate permease family AC609_19185 PF01740 STAS domain AC609_19190 PF00654 Voltage gated chloride channel AC609_19200 PF00557 Metallopeptidase family M24 AC609_19210 PF03466 LysR substrate binding domain AC609_19210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC609_19235 PF04546 Sigma-70, non-essential region AC609_19235 PF04545 Sigma-70, region 4 AC609_19235 PF04539 Sigma-70 region 3 AC609_19235 PF04542 Sigma-70 region 2 AC609_19235 PF00140 Sigma-70 factor, region 1.2 AC609_19235 PF03979 Sigma-70 factor, region 1.1 AC609_19240 PF02580 D-Tyr-tRNA(Tyr) deacylase AC609_19245 PF03279 Bacterial lipid A biosynthesis acyltransferase AC609_19260 PF00925 GTP cyclohydrolase II AC609_19280 PF00535 Glycosyl transferase family 2 AC609_19295 PF01189 16S rRNA methyltransferase RsmB/F AC609_19295 PF01029 NusB family AC609_19300 PF00551 Formyl transferase AC609_19300 PF02911 Formyl transferase, C-terminal domain AC609_19305 PF01327 Polypeptide deformylase AC609_19310 PF01476 LysM domain AC609_19315 PF02481 DNA recombination-mediator protein A AC609_19315 PF17782 DprA winged helix domain AC609_19320 PF04361 Protein of unknown function (DUF494) AC609_19325 PF00114 Pilin (bacterial filament) AC609_19325 PF07963 Prokaryotic N-terminal methylation motif AC609_19335 PF01131 DNA topoisomerase AC609_19335 PF01751 Toprim domain AC609_19335 PF13368 Topoisomerase C-terminal repeat AC609_19340 PF01300 Telomere recombination AC609_19365 PF01343 Peptidase family S49 AC609_19370 PF01554 MatE AC609_19390 PF18074 Primosomal protein N C-terminal domain AC609_19390 PF17764 3′ DNA-binding domain (3′BD) AC609_19390 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AC609_19390 PF00271 Helicase conserved C-terminal domain AC609_19390 PF00270 DEAD/DEAH box helicase AC609_19395 PF13417 Glutathione S-transferase, N-terminal domain AC609_19395 PF00043 Glutathione S-transferase, C-terminal domain AC609_19415 PF03458 UPF0126 domain AC609_19420 PF04545 Sigma-70, region 4 AC609_19420 PF04542 Sigma-70 region 2 AC609_19425 PF03167 Uracil DNA glycosylase superfamily AC609_19430 PF01339 CheB methylesterase AC609_19430 PF00072 Response regulator receiver domain AC609_19435 PF18075 FtsX extracellular domain AC609_19440 PF00005 ABC transporter AC609_19445 PF12300 ATP-dependent RNA helicase RhlB AC609_19445 PF00270 DEAD/DEAH box helicase AC609_19445 PF00271 Helicase conserved C-terminal domain AC609_19450 PF00085 Thioredoxin AC609_19455 PF07497 Rho termination factor, RNA-binding domain AC609_19455 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AC609_19455 PF07498 Rho termination factor, N-terminal domain AC609_19465 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) AC609_19480 PF03971 Monomeric isocitrate dehydrogenase AC609_19490 PF01476 LysM domain AC609_19490 PF04972 BON domain AC609_19495 PF14489 QueF-like protein AC609_19495 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AC609_19500 PF07687 Peptidase dimerisation domain AC609_19500 PF01546 Peptidase family M20/M25/M40 AC609_19505 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AC609_19510 PF00873 AcrB/AcrD/AcrF family AC609_19515 PF00873 AcrB/AcrD/AcrF family AC609_19530 PF07063 Domain of unknown function (DUF1338) AC609_19555 PF00872 Transposase, Mutator family AC609_19575 PF01427 D-ala-D-ala dipeptidase AC609_19580 PF01510 N-acetylmuramoyl-L-alanine amidase AC609_19600 PF13520 Amino acid permease AC609_19620 PF00872 Transposase, Mutator family AC609_19630 PF07995 Glucose / Sorbosone dehydrogenase AC609_19645 PF01915 Glycosyl hydrolase family 3 C-terminal domain AC609_19645 PF14310 Fibronectin type III-like domain AC609_19645 PF00933 Glycosyl hydrolase family 3 N terminal domain AC609_19650 PF02152 Dihydroneopterin aldolase AC609_19655 PF00814 Glycoprotease family AC609_19660 PF01165 Ribosomal protein S21 AC609_19665 PF09424 Yqey-like protein AC609_19675 PF03631 Virulence factor BrkB AC609_19680 PF08278 DNA primase DnaG DnaB-binding AC609_19680 PF08275 DNA primase catalytic core, N-terminal domain AC609_19680 PF01807 CHC2 zinc finger AC609_19680 PF10410 DnaB-helicase binding domain of primase AC609_19685 PF13593 SBF-like CPA transporter family (DUF4137) AC609_19695 PF01040 UbiA prenyltransferase family AC609_19720 PF00510 Cytochrome c oxidase subunit III AC609_19725 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 AC609_19735 PF00115 Cytochrome C and Quinol oxidase polypeptide I AC609_19740 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AC609_19740 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AC609_19780 PF00579 tRNA synthetases class I (W and Y) AC609_19785 PF01551 Peptidase family M23 AC609_19785 PF04225 Opacity-associated protein A LysM-like domain AC609_19790 PF03702 Anhydro-N-acetylmuramic acid kinase AC609_19800 PF07690 Major Facilitator Superfamily AC609_19805 PF03372 Endonuclease/Exonuclease/phosphatase family AC609_19810 PF00156 Phosphoribosyl transferase domain AC609_19820 PF13614 AAA domain AC609_19825 PF17762 HTH domain found in ParB protein AC609_19825 PF02195 ParB-like nuclease domain AC609_19835 PF01370 NAD dependent epimerase/dehydratase family AC609_19840 PF00535 Glycosyl transferase family 2 AC609_19855 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AC609_19855 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AC609_19855 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AC609_19855 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AC609_19860 PF00692 dUTPase AC609_19865 PF02441 Flavoprotein AC609_19865 PF04127 DNA / pantothenate metabolism flavoprotein AC609_19870 PF04002 RadC-like JAB domain AC609_19875 PF05746 DALR anticodon binding domain AC609_19875 PF03485 Arginyl tRNA synthetase N terminal domain AC609_19875 PF00750 tRNA synthetases class I (R) AC609_19890 PF00106 short chain dehydrogenase AC609_19900 PF01757 Acyltransferase family AC609_19905 PF03033 Glycosyltransferase family 28 N-terminal domain AC609_19910 PF00975 Thioesterase domain AC609_19910 PF00668 Condensation domain AC609_19910 PF13193 AMP-binding enzyme C-terminal domain AC609_19910 PF00501 AMP-binding enzyme AC609_19910 PF00550 Phosphopantetheine attachment site AC609_19915 PF17944 Arginine decarboxylase C-terminal helical extension AC609_19915 PF17810 Arginine decarboxylase helical bundle domain AC609_19915 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AC609_19920 PF17284 Spermidine synthase tetramerisation domain AC609_19945 PF07555 beta-N-acetylglucosaminidase AC609_19945 PF02838 Glycosyl hydrolase family 20, domain 2 AC609_19945 PF00754 F5/8 type C domain AC609_19945 PF00963 Cohesin domain AC609_19945 PF00041 Fibronectin type III domain AC609_19950 PF00543 Nitrogen regulatory protein P-II AC609_19955 PF04380 Membrane fusogenic activity AC609_19960 PF13335 Magnesium chelatase, subunit ChlI C-terminal AC609_19960 PF01078 Magnesium chelatase, subunit ChlI AC609_19975 PF12792 CSS motif domain associated with EAL AC609_19975 PF00563 EAL domain AC609_19980 PF00487 Fatty acid desaturase AC609_19985 PF00970 Oxidoreductase FAD-binding domain AC609_19985 PF00111 2Fe-2S iron-sulfur cluster binding domain AC609_19985 PF00175 Oxidoreductase NAD-binding domain AC609_19990 PF00440 Bacterial regulatory proteins, tetR family AC609_20010 PF01139 tRNA-splicing ligase RtcB AC609_20050 PF01370 NAD dependent epimerase/dehydratase family AC609_20050 PF08338 Domain of unknown function (DUF1731) AC609_20055 PF00486 Transcriptional regulatory protein, C terminal AC609_20055 PF00072 Response regulator receiver domain AC609_20060 PF00512 His Kinase A (phospho-acceptor) domain AC609_20060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC609_20060 PF08521 Two-component sensor kinase N-terminal AC609_20080 PF00595 PDZ domain AC609_20100 PF01594 AI-2E family transporter AC609_20105 PF13419 Haloacid dehalogenase-like hydrolase AC609_20110 PF00883 Cytosol aminopeptidase family, catalytic domain AC609_20110 PF02789 Cytosol aminopeptidase family, N-terminal domain AC609_20120 PF04542 Sigma-70 region 2 AC609_20120 PF08281 Sigma-70, region 4 AC609_20125 PF00199 Catalase AC609_20145 PF00196 Bacterial regulatory proteins, luxR family AC609_20145 PF00072 Response regulator receiver domain AC609_20150 PF07730 Histidine kinase AC609_20155 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AC609_20160 PF00005 ABC transporter AC609_20185 PF00892 EamA-like transporter family AC609_20205 PF00753 Metallo-beta-lactamase superfamily AC609_20210 PF00579 tRNA synthetases class I (W and Y) AC609_20215 PF05532 CsbD-like AC609_20230 PF00491 Arginase family AC609_20255 PF02223 Thymidylate kinase AC609_20270 PF03309 Type III pantothenate kinase AC609_20275 PF08279 HTH domain AC609_20275 PF03099 Biotin/lipoate A/B protein ligase family AC609_20275 PF02237 Biotin protein ligase C terminal domain AC609_20285 PF06167 Glucose-regulated metallo-peptidase M90 AC609_20300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC609_20300 PF00672 HAMP domain AC609_20300 PF00512 His Kinase A (phospho-acceptor) domain AC609_20305 PF00072 Response regulator receiver domain AC609_20305 PF00486 Transcriptional regulatory protein, C terminal AC609_20315 PF01207 Dihydrouridine synthase (Dus) AC609_20330 PF00199 Catalase AC609_20330 PF06628 Catalase-related immune-responsive AC609_20355 PF00872 Transposase, Mutator family AC609_20360 PF00005 ABC transporter AC609_20360 PF00664 ABC transporter transmembrane region AC609_20360 PF03412 Peptidase C39 family AC609_20365 PF00529 HlyD membrane-fusion protein of T1SS AC609_20365 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AC609_20370 PF06733 DEAD_2 AC609_20370 PF13307 Helicase C-terminal domain AC609_20385 PF08501 Shikimate dehydrogenase substrate binding domain AC609_20385 PF01488 Shikimate / quinate 5-dehydrogenase AC609_20385 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AC609_20395 PF00175 Oxidoreductase NAD-binding domain AC609_20395 PF00258 Flavodoxin AC609_20395 PF00667 FAD binding domain AC609_20405 PF00490 Delta-aminolevulinic acid dehydratase AC609_20430 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AC609_20430 PF00326 Prolyl oligopeptidase family AC609_20460 PF04820 Tryptophan halogenase AC609_20475 PF00005 ABC transporter AC609_20485 PF01381 Helix-turn-helix AC609_20495 PF01229 Glycosyl hydrolases family 39 AC609_20500 PF02583 Metal-sensitive transcriptional repressor AC609_20505 PF01545 Cation efflux family AC609_20510 PF00175 Oxidoreductase NAD-binding domain AC609_20510 PF00111 2Fe-2S iron-sulfur cluster binding domain AC609_20510 PF00970 Oxidoreductase FAD-binding domain AC609_20515 PF00005 ABC transporter AC609_20520 PF01061 ABC-2 type transporter AC609_20525 PF02558 Ketopantoate reductase PanE/ApbA AC609_20525 PF08546 Ketopantoate reductase PanE/ApbA C terminal AC609_20555 PF00085 Thioredoxin AC609_20575 PF00268 Ribonucleotide reductase, small chain AC609_20580 PF03477 ATP cone domain AC609_20580 PF02867 Ribonucleotide reductase, barrel domain AC609_20580 PF00317 Ribonucleotide reductase, all-alpha domain AC609_20590 PF00583 Acetyltransferase (GNAT) family AC609_20590 PF13607 Succinyl-CoA ligase like flavodoxin domain AC609_20590 PF13380 CoA binding domain AC609_20595 PF01769 Divalent cation transporter AC609_20595 PF00571 CBS domain AC609_20595 PF03448 MgtE intracellular N domain AC609_20600 PF00194 Eukaryotic-type carbonic anhydrase AC609_20605 PF02254 TrkA-N domain AC609_20605 PF00999 Sodium/hydrogen exchanger family AC609_20620 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AC609_20620 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AC609_20625 PF00723 Glycosyl hydrolases family 15 AC609_20640 PF05166 YcgL domain AC609_20645 PF00109 Beta-ketoacyl synthase, N-terminal domain AC609_20645 PF02801 Beta-ketoacyl synthase, C-terminal domain AC609_20655 PF00535 Glycosyl transferase family 2 AC609_20705 PF07977 FabA-like domain AC609_20710 PF01553 Acyltransferase AC609_20720 PF00550 Phosphopantetheine attachment site AC609_20725 PF04820 Tryptophan halogenase AC609_20760 PF01218 Coproporphyrinogen III oxidase AC609_20765 PF01367 5'-3' exonuclease, C-terminal SAM fold AC609_20765 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AC609_20765 PF00476 DNA polymerase family A AC609_20765 PF01612 3'-5' exonuclease AC609_20795 PF00069 Protein kinase domain AC609_20825 PF00248 Aldo/keto reductase family AC609_20830 PF03466 LysR substrate binding domain AC609_20830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC609_20845 PF04717 Type VI secretion system, phage-baseplate injector AC609_20860 PF03793 PASTA domain AC609_20860 PF00069 Protein kinase domain AC609_20870 PF04542 Sigma-70 region 2 AC609_20870 PF08281 Sigma-70, region 4 AC609_20890 PF03372 Endonuclease/Exonuclease/phosphatase family AC609_20900 PF01425 Amidase AC609_20930 PF00872 Transposase, Mutator family AC609_20935 PF05598 Transposase domain (DUF772) AC609_20935 PF01609 Transposase DDE domain AC609_20980 PF05638 Type VI secretion system effector, Hcp AC609_21005 PF14602 Hexapeptide repeat of succinyl-transferase AC609_21005 PF12464 Maltose acetyltransferase AC609_21015 PF13361 UvrD-like helicase C-terminal domain AC609_21015 PF00580 UvrD/REP helicase N-terminal domain AC609_21030 PF13396 Phospholipase_D-nuclease N-terminal AC609_21030 PF13091 PLD-like domain AC609_21035 PF03466 LysR substrate binding domain AC609_21035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC609_21040 PF03737 Aldolase/RraA AC609_21045 PF04303 PrpF protein AC609_21050 PF04909 Amidohydrolase AC609_21055 PF00471 Ribosomal protein L33 AC609_21060 PF00830 Ribosomal L28 family AC609_21070 PF00873 AcrB/AcrD/AcrF family AC609_21075 PF00873 AcrB/AcrD/AcrF family AC609_21080 PF13533 Biotin-lipoyl like AC609_21100 PF02527 rRNA small subunit methyltransferase G AC609_21105 PF09423 PhoD-like phosphatase AC609_21105 PF16655 PhoD-like phosphatase, N-terminal domain AC609_21110 PF16655 PhoD-like phosphatase, N-terminal domain AC609_21110 PF09423 PhoD-like phosphatase AC609_21115 PF01648 4'-phosphopantetheinyl transferase superfamily AC609_21125 PF04226 Transglycosylase associated protein AC609_21135 PF03372 Endonuclease/Exonuclease/phosphatase family AC609_21140 PF00480 ROK family AC609_21160 PF00474 Sodium:solute symporter family AC609_21165 PF04341 Protein of unknown function, DUF485 AC609_21175 PF13193 AMP-binding enzyme C-terminal domain AC609_21175 PF16177 Acetyl-coenzyme A synthetase N-terminus AC609_21175 PF00501 AMP-binding enzyme AC609_21180 PF00196 Bacterial regulatory proteins, luxR family AC609_21180 PF00072 Response regulator receiver domain AC609_21200 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain AC609_21200 PF04616 Glycosyl hydrolases family 43 AC609_21210 PF00248 Aldo/keto reductase family AC609_21225 PF01557 Fumarylacetoacetate (FAA) hydrolase family AC609_21230 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AC609_21230 PF13378 Enolase C-terminal domain-like AC609_21235 PF05336 L-rhamnose mutarotase AC609_21240 PF07690 Major Facilitator Superfamily AC609_21245 PF09339 IclR helix-turn-helix domain AC609_21245 PF01614 Bacterial transcriptional regulator AC609_21250 PF02311 AraC-like ligand binding domain AC609_21250 PF12833 Helix-turn-helix domain AC609_21260 PF02659 Putative manganese efflux pump AC609_21265 PF00512 His Kinase A (phospho-acceptor) domain AC609_21265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC609_21275 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain AC609_21275 PF06165 Glycosyltransferase family 36 AC609_21290 PF01011 PQQ enzyme repeat AC609_21290 PF13360 PQQ-like domain AC609_21290 PF13570 PQQ-like domain AC609_21310 PF04357 TamB, inner membrane protein subunit of TAM complex AC609_21315 PF17243 POTRA domain TamA domain 1 AC609_21315 PF01103 Surface antigen AC609_21320 PF00593 TonB dependent receptor AC609_21320 PF07715 TonB-dependent Receptor Plug Domain AC609_21330 PF13181 Tetratricopeptide repeat AC609_21335 PF02092 Glycyl-tRNA synthetase beta subunit AC609_21335 PF05746 DALR anticodon binding domain AC609_21340 PF02091 Glycyl-tRNA synthetase alpha subunit AC609_21345 PF00437 Type II/IV secretion system protein AC609_21345 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AC609_21355 PF00117 Glutamine amidotransferase class-I AC609_21355 PF00958 GMP synthase C terminal domain AC609_21370 PF00902 Sec-independent protein translocase protein (TatC) AC609_21375 PF02416 mttA/Hcf106 family AC609_21380 PF02416 mttA/Hcf106 family AC609_21390 PF00762 Ferrochelatase AC609_21395 PF12697 Alpha/beta hydrolase family AC609_21420 PF04381 Putative exonuclease, RdgC AC609_21425 PF01171 PP-loop family AC609_21435 PF00356 Bacterial regulatory proteins, lacI family AC609_21440 PF03648 Glycosyl hydrolase family 67 N-terminus AC609_21440 PF07488 Glycosyl hydrolase family 67 middle domain AC609_21440 PF07477 Glycosyl hydrolase family 67 C-terminus AC609_21450 PF13378 Enolase C-terminal domain-like AC609_21450 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AC609_21455 PF04616 Glycosyl hydrolases family 43 AC609_21455 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain AC609_21460 PF07691 PA14 domain AC609_21460 PF01915 Glycosyl hydrolase family 3 C-terminal domain AC609_21460 PF00933 Glycosyl hydrolase family 3 N terminal domain AC609_21460 PF14310 Fibronectin type III-like domain AC609_21465 PF01232 Mannitol dehydrogenase Rossmann domain AC609_21465 PF08125 Mannitol dehydrogenase C-terminal domain AC609_21505 PF00171 Aldehyde dehydrogenase family AC609_21520 PF00202 Aminotransferase class-III AC609_21530 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AC609_21530 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AC609_21545 PF08450 SMP-30/Gluconolactonase/LRE-like region AC609_21550 PF00331 Glycosyl hydrolase family 10 AC609_21555 PF16355 Domain of unknown function (DUF4982) AC609_21555 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 AC609_21555 PF00703 Glycosyl hydrolases family 2 AC609_21555 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AC609_21555 PF02837 Glycosyl hydrolases family 2, sugar binding domain AC609_21560 PF02614 Glucuronate isomerase AC609_21565 PF03422 Carbohydrate binding module (family 6) AC609_21565 PF00331 Glycosyl hydrolase family 10 AC609_21565 PF00553 Cellulose binding domain AC609_21575 PF00331 Glycosyl hydrolase family 10 AC609_21575 PF03422 Carbohydrate binding module (family 6) AC609_21575 PF00553 Cellulose binding domain AC609_21595 PF04616 Glycosyl hydrolases family 43 AC609_21655 PF00550 Phosphopantetheine attachment site AC609_21655 PF08659 KR domain AC609_21655 PF02801 Beta-ketoacyl synthase, C-terminal domain AC609_21655 PF00698 Acyl transferase domain AC609_21655 PF08240 Alcohol dehydrogenase GroES-like domain AC609_21655 PF00107 Zinc-binding dehydrogenase AC609_21655 PF14765 Polyketide synthase dehydratase AC609_21655 PF16197 Ketoacyl-synthetase C-terminal extension AC609_21655 PF00109 Beta-ketoacyl synthase, N-terminal domain AC609_21660 PF01553 Acyltransferase AC609_21670 PF00356 Bacterial regulatory proteins, lacI family AC609_21690 PF04820 Tryptophan halogenase AC609_21695 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AC609_21700 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) AC609_21705 PF04337 Protein of unknown function, DUF480 AC609_21715 PF06969 HemN C-terminal domain AC609_21715 PF04055 Radical SAM superfamily AC609_21770 PF00580 UvrD/REP helicase N-terminal domain AC609_21770 PF13361 UvrD-like helicase C-terminal domain AC609_21775 PF00265 Thymidine kinase AC609_21780 PF01590 GAF domain AC609_21780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC609_21780 PF00512 His Kinase A (phospho-acceptor) domain AC609_21780 PF00360 Phytochrome region AC609_21780 PF08446 PAS fold AC609_21785 PF04349 Periplasmic glucan biosynthesis protein, MdoG AC609_21805 PF06827 Zinc finger found in FPG and IleRS AC609_21805 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AC609_21805 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AC609_21835 PF03594 Benzoate membrane transport protein AC609_21840 PF01590 GAF domain AC609_21840 PF00360 Phytochrome region AC609_21840 PF13426 PAS domain AC609_21840 PF08446 PAS fold AC609_21845 PF01126 Heme oxygenase AC609_21850 PF07690 Major Facilitator Superfamily AC609_21860 PF01263 Aldose 1-epimerase AC609_21870 PF02810 SEC-C motif AC609_21935 PF13091 PLD-like domain AC609_21935 PF13396 Phospholipase_D-nuclease N-terminal AC609_21945 PF00106 short chain dehydrogenase AC609_21950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC609_21950 PF03466 LysR substrate binding domain AC609_21960 PF00083 Sugar (and other) transporter AC609_21965 PF04632 Fusaric acid resistance protein family AC609_21970 PF02321 Outer membrane efflux protein AC609_21975 PF00529 HlyD membrane-fusion protein of T1SS AC609_21975 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AC609_21980 PF07869 Protein of unknown function (DUF1656) AC609_21990 PF01227 GTP cyclohydrolase I AC609_22010 PF00872 Transposase, Mutator family AC609_22020 PF01925 Sulfite exporter TauE/SafE AC609_22035 PF00872 Transposase, Mutator family AC609_22060 PF00849 RNA pseudouridylate synthase AC609_22095 PF06511 Type III secretion systems tip complex components AC609_22135 PF07720 Tetratricopeptide repeat AC609_22140 PF01312 FlhB HrpN YscU SpaS Family AC609_22145 PF01311 Bacterial export proteins, family 1 AC609_22150 PF01313 Bacterial export proteins, family 3 AC609_22155 PF00813 FliP family AC609_22175 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AC609_22175 PF02874 ATP synthase alpha/beta family, beta-barrel domain AC609_22175 PF18269 T3SS EscN ATPase C-terminal domain AC609_22185 PF00771 FHIPEP family AC609_22190 PF07201 HrpJ-like domain AC609_22210 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF AC609_22290 PF01609 Transposase DDE domain AC609_22290 PF05598 Transposase domain (DUF772) AC609_22330 PF01527 Transposase AC609_22335 PF13276 HTH-like domain AC609_22335 PF13333 Integrase core domain AC609_22335 PF00665 Integrase core domain AC609_22375 PF13683 Integrase core domain AC609_22375 PF13276 HTH-like domain AC609_22380 PF01527 Transposase AC609_22400 PF00289 Biotin carboxylase, N-terminal domain AC609_22400 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AC609_22400 PF02785 Biotin carboxylase C-terminal domain AC609_22405 PF01425 Amidase AC609_22460 PF01381 Helix-turn-helix AC609_22470 PF13538 UvrD-like helicase C-terminal domain AC609_22475 PF13361 UvrD-like helicase C-terminal domain AC609_22475 PF00580 UvrD/REP helicase N-terminal domain AC609_22475 PF12705 PD-(D/E)XK nuclease superfamily AC609_22480 PF17946 RecC C-terminal domain AC609_22515 PF00005 ABC transporter AC609_22520 PF02405 Permease MlaE AC609_22525 PF02470 MlaD protein AC609_22530 PF05494 MlaC protein AC609_22540 PF04333 MlaA lipoprotein AC609_22555 PF00255 Glutathione peroxidase AC609_22565 PF02646 RmuC family AC609_22570 PF08240 Alcohol dehydrogenase GroES-like domain AC609_22570 PF00107 Zinc-binding dehydrogenase AC609_22575 PF03466 LysR substrate binding domain AC609_22575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC609_22600 PF13520 Amino acid permease AC609_22605 PF17678 Glycosyl hydrolase family 92 N-terminal domain AC609_22605 PF07971 Glycosyl hydrolase family 92 AC609_22610 PF10947 Protein of unknown function (DUF2628) AC609_22615 PF00990 Diguanylate cyclase, GGDEF domain AC609_22620 PF13556 PucR C-terminal helix-turn-helix domain AC609_22620 PF05651 Putative sugar diacid recognition AC609_22620 PF17853 GGDEF-like domain AC609_22625 PF02595 Glycerate kinase family AC609_22645 PF10672 S-adenosylmethionine-dependent methyltransferase AC609_22645 PF17785 PUA-like domain AC609_22650 PF03741 Integral membrane protein TerC family AC609_22655 PF01694 Rhomboid family AC609_22660 PF03009 Glycerophosphoryl diester phosphodiesterase family AC609_22670 PF01569 PAP2 superfamily AC609_22675 PF01926 50S ribosome-binding GTPase AC609_22675 PF12631 MnmE helical domain AC609_22675 PF10396 GTP-binding protein TrmE N-terminus AC609_22680 PF01522 Polysaccharide deacetylase AC609_22685 PF14849 YidC periplasmic domain AC609_22685 PF02096 60Kd inner membrane protein AC609_22690 PF00825 Ribonuclease P AC609_22695 PF00468 Ribosomal protein L34 AC609_22735 PF12950 TaqI-like C-terminal specificity domain AC609_22735 PF07669 Eco57I restriction-modification methylase AC609_22740 PF17728 BsuBI/PstI restriction endonuclease HTH domain AC609_22740 PF06616 BsuBI/PstI restriction endonuclease domain AC609_22810 PF00872 Transposase, Mutator family AC609_22860 PF00239 Resolvase, N terminal domain AC609_22860 PF02796 Helix-turn-helix domain of resolvase AC609_22870 PF01850 PIN domain AC609_22885 PF13368 Topoisomerase C-terminal repeat AC609_22885 PF01131 DNA topoisomerase AC609_22885 PF01396 Topoisomerase DNA binding C4 zinc finger AC609_22885 PF01751 Toprim domain AC609_22920 PF03743 Bacterial conjugation TrbI-like protein AC609_22935 PF04610 TrbL/VirB6 plasmid conjugal transfer protein AC609_22945 PF03135 CagE, TrbE, VirB family, component of type IV transporter system AC609_22955 PF00437 Type II/IV secretion system protein AC609_22990 PF02534 Type IV secretory system Conjugative DNA transfer AC609_23055 PF06067 Domain of unknown function (DUF932) AC609_23080 PF18495 Antitoxin VbhA AC609_23105 PF01609 Transposase DDE domain AC609_23105 PF05598 Transposase domain (DUF772) AC609_23130 PF00872 Transposase, Mutator family AC609_23175 PF00872 Transposase, Mutator family AC609_23195 PF01555 DNA methylase AC609_23200 PF09571 XcyI restriction endonuclease AC609_23230 PF01850 PIN domain AC609_23240 PF02796 Helix-turn-helix domain of resolvase AC609_23240 PF00239 Resolvase, N terminal domain AC609_23270 PF11740 Plasmid replication region DNA-binding N-term AC609_23295 PF03377 TAL effector repeat AC609_23320 PF07963 Prokaryotic N-terminal methylation motif AC609_23320 PF00114 Pilin (bacterial filament) AC609_23345 PF00156 Phosphoribosyl transferase domain