locus-tag class description DGM93_00010 PF00308 Bacterial dnaA protein DGM93_00010 PF08299 Bacterial dnaA protein helix-turn-helix DGM93_00010 PF11638 DnaA N-terminal domain DGM93_00015 PF00712 DNA polymerase III beta subunit, N-terminal domain DGM93_00015 PF02767 DNA polymerase III beta subunit, central domain DGM93_00015 PF02768 DNA polymerase III beta subunit, C-terminal domain DGM93_00020 PF02463 RecF/RecN/SMC N terminal domain DGM93_00025 PF01751 Toprim domain DGM93_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM93_00025 PF18053 DNA gyrase B subunit insert domain DGM93_00025 PF00986 DNA gyrase B subunit, carboxyl terminus DGM93_00025 PF00204 DNA gyrase B DGM93_00035 PF01435 Peptidase family M48 DGM93_00045 PF03544 Gram-negative bacterial TonB protein C-terminal DGM93_00050 PF01618 MotA/TolQ/ExbB proton channel family DGM93_00055 PF02472 Biopolymer transport protein ExbD/TolR DGM93_00060 PF02472 Biopolymer transport protein ExbD/TolR DGM93_00090 PF00872 Transposase, Mutator family DGM93_00105 PF03695 Uncharacterised protein family (UPF0149) DGM93_00105 PF02810 SEC-C motif DGM93_00120 PF02796 Helix-turn-helix domain of resolvase DGM93_00120 PF00239 Resolvase, N terminal domain DGM93_00145 PF00872 Transposase, Mutator family DGM93_00240 PF01381 Helix-turn-helix DGM93_00250 PF13538 UvrD-like helicase C-terminal domain DGM93_00255 PF12705 PD-(D/E)XK nuclease superfamily DGM93_00255 PF00580 UvrD/REP helicase N-terminal domain DGM93_00255 PF13361 UvrD-like helicase C-terminal domain DGM93_00260 PF17946 RecC C-terminal domain DGM93_00295 PF00005 ABC transporter DGM93_00300 PF02405 Permease MlaE DGM93_00305 PF02470 MlaD protein DGM93_00310 PF05494 MlaC protein DGM93_00320 PF04333 MlaA lipoprotein DGM93_00360 PF00872 Transposase, Mutator family DGM93_00385 PF13091 PLD-like domain DGM93_00385 PF13396 Phospholipase_D-nuclease N-terminal DGM93_00395 PF00106 short chain dehydrogenase DGM93_00400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM93_00400 PF03466 LysR substrate binding domain DGM93_00410 PF00083 Sugar (and other) transporter DGM93_00415 PF04632 Fusaric acid resistance protein family DGM93_00420 PF02321 Outer membrane efflux protein DGM93_00425 PF00529 HlyD membrane-fusion protein of T1SS DGM93_00425 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DGM93_00430 PF07869 Protein of unknown function (DUF1656) DGM93_00440 PF01227 GTP cyclohydrolase I DGM93_00455 PF00872 Transposase, Mutator family DGM93_00465 PF01925 Sulfite exporter TauE/SafE DGM93_00570 PF02810 SEC-C motif DGM93_00580 PF01263 Aldose 1-epimerase DGM93_00590 PF07690 Major Facilitator Superfamily DGM93_00595 PF01126 Heme oxygenase DGM93_00600 PF08446 PAS fold DGM93_00600 PF00360 Phytochrome region DGM93_00600 PF01590 GAF domain DGM93_00600 PF13426 PAS domain DGM93_00605 PF03594 Benzoate membrane transport protein DGM93_00635 PF06827 Zinc finger found in FPG and IleRS DGM93_00635 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DGM93_00635 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DGM93_00645 PF04349 Periplasmic glucan biosynthesis protein, MdoG DGM93_00650 PF08446 PAS fold DGM93_00650 PF00360 Phytochrome region DGM93_00650 PF01590 GAF domain DGM93_00650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM93_00650 PF00512 His Kinase A (phospho-acceptor) domain DGM93_00655 PF00265 Thymidine kinase DGM93_00660 PF00580 UvrD/REP helicase N-terminal domain DGM93_00660 PF13361 UvrD-like helicase C-terminal domain DGM93_00710 PF06969 HemN C-terminal domain DGM93_00710 PF04055 Radical SAM superfamily DGM93_00725 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) DGM93_00730 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DGM93_00735 PF04820 Tryptophan halogenase DGM93_00750 PF00356 Bacterial regulatory proteins, lacI family DGM93_00765 PF01553 Acyltransferase DGM93_00775 PF00698 Acyl transferase domain DGM93_00775 PF00107 Zinc-binding dehydrogenase DGM93_00775 PF16197 Ketoacyl-synthetase C-terminal extension DGM93_00775 PF00109 Beta-ketoacyl synthase, N-terminal domain DGM93_00775 PF02801 Beta-ketoacyl synthase, C-terminal domain DGM93_00775 PF08659 KR domain DGM93_00775 PF00550 Phosphopantetheine attachment site DGM93_00775 PF14765 Polyketide synthase dehydratase DGM93_00775 PF08240 Alcohol dehydrogenase GroES-like domain DGM93_00805 PF00872 Transposase, Mutator family DGM93_00835 PF04616 Glycosyl hydrolases family 43 DGM93_00855 PF03422 Carbohydrate binding module (family 6) DGM93_00855 PF00553 Cellulose binding domain DGM93_00855 PF00331 Glycosyl hydrolase family 10 DGM93_00865 PF00553 Cellulose binding domain DGM93_00865 PF03422 Carbohydrate binding module (family 6) DGM93_00865 PF00331 Glycosyl hydrolase family 10 DGM93_00870 PF02614 Glucuronate isomerase DGM93_00875 PF16355 Domain of unknown function (DUF4982) DGM93_00875 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 DGM93_00875 PF00703 Glycosyl hydrolases family 2 DGM93_00875 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DGM93_00875 PF02837 Glycosyl hydrolases family 2, sugar binding domain DGM93_00880 PF00331 Glycosyl hydrolase family 10 DGM93_00885 PF08450 SMP-30/Gluconolactonase/LRE-like region DGM93_00900 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DGM93_00900 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DGM93_00910 PF00202 Aminotransferase class-III DGM93_00925 PF00171 Aldehyde dehydrogenase family DGM93_00975 PF01232 Mannitol dehydrogenase Rossmann domain DGM93_00975 PF08125 Mannitol dehydrogenase C-terminal domain DGM93_00980 PF14310 Fibronectin type III-like domain DGM93_00980 PF00933 Glycosyl hydrolase family 3 N terminal domain DGM93_00980 PF01915 Glycosyl hydrolase family 3 C-terminal domain DGM93_00980 PF07691 PA14 domain DGM93_00985 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain DGM93_00985 PF04616 Glycosyl hydrolases family 43 DGM93_00990 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DGM93_00990 PF13378 Enolase C-terminal domain-like DGM93_01000 PF07477 Glycosyl hydrolase family 67 C-terminus DGM93_01000 PF07488 Glycosyl hydrolase family 67 middle domain DGM93_01000 PF03648 Glycosyl hydrolase family 67 N-terminus DGM93_01005 PF00356 Bacterial regulatory proteins, lacI family DGM93_01020 PF01171 PP-loop family DGM93_01025 PF04381 Putative exonuclease, RdgC DGM93_01045 PF00762 Ferrochelatase DGM93_01055 PF02416 mttA/Hcf106 family DGM93_01060 PF02416 mttA/Hcf106 family DGM93_01065 PF00902 Sec-independent protein translocase protein (TatC) DGM93_01080 PF00958 GMP synthase C terminal domain DGM93_01080 PF00117 Glutamine amidotransferase class-I DGM93_01100 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DGM93_01100 PF00437 Type II/IV secretion system protein DGM93_01105 PF02091 Glycyl-tRNA synthetase alpha subunit DGM93_01110 PF05746 DALR anticodon binding domain DGM93_01110 PF02092 Glycyl-tRNA synthetase beta subunit DGM93_01115 PF13181 Tetratricopeptide repeat DGM93_01125 PF00593 TonB dependent receptor DGM93_01125 PF07715 TonB-dependent Receptor Plug Domain DGM93_01130 PF01103 Surface antigen DGM93_01130 PF17243 POTRA domain TamA domain 1 DGM93_01135 PF04357 TamB, inner membrane protein subunit of TAM complex DGM93_01155 PF13360 PQQ-like domain DGM93_01155 PF01011 PQQ enzyme repeat DGM93_01155 PF13570 PQQ-like domain DGM93_01175 PF06165 Glycosyltransferase family 36 DGM93_01175 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain DGM93_01190 PF00512 His Kinase A (phospho-acceptor) domain DGM93_01190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM93_01195 PF02659 Putative manganese efflux pump DGM93_01205 PF12833 Helix-turn-helix domain DGM93_01205 PF02311 AraC-like ligand binding domain DGM93_01210 PF09339 IclR helix-turn-helix domain DGM93_01210 PF01614 Bacterial transcriptional regulator DGM93_01215 PF07690 Major Facilitator Superfamily DGM93_01220 PF05336 L-rhamnose mutarotase DGM93_01225 PF13378 Enolase C-terminal domain-like DGM93_01225 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DGM93_01230 PF01557 Fumarylacetoacetate (FAA) hydrolase family DGM93_01245 PF00248 Aldo/keto reductase family DGM93_01255 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain DGM93_01255 PF04616 Glycosyl hydrolases family 43 DGM93_01285 PF00196 Bacterial regulatory proteins, luxR family DGM93_01285 PF00072 Response regulator receiver domain DGM93_01290 PF00501 AMP-binding enzyme DGM93_01290 PF13193 AMP-binding enzyme C-terminal domain DGM93_01290 PF16177 Acetyl-coenzyme A synthetase N-terminus DGM93_01300 PF04341 Protein of unknown function, DUF485 DGM93_01305 PF00474 Sodium:solute symporter family DGM93_01315 PF09312 SurA N-terminal domain DGM93_01315 PF00639 PPIC-type PPIASE domain DGM93_01325 PF00480 ROK family DGM93_01330 PF03372 Endonuclease/Exonuclease/phosphatase family DGM93_01340 PF04226 Transglycosylase associated protein DGM93_01345 PF01648 4'-phosphopantetheinyl transferase superfamily DGM93_01350 PF09423 PhoD-like phosphatase DGM93_01350 PF16655 PhoD-like phosphatase, N-terminal domain DGM93_01355 PF09423 PhoD-like phosphatase DGM93_01355 PF16655 PhoD-like phosphatase, N-terminal domain DGM93_01360 PF02527 rRNA small subunit methyltransferase G DGM93_01385 PF13533 Biotin-lipoyl like DGM93_01390 PF00873 AcrB/AcrD/AcrF family DGM93_01400 PF00830 Ribosomal L28 family DGM93_01405 PF00471 Ribosomal protein L33 DGM93_01410 PF04909 Amidohydrolase DGM93_01420 PF04303 PrpF protein DGM93_01425 PF03737 Aldolase/RraA DGM93_01430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM93_01430 PF03466 LysR substrate binding domain DGM93_01435 PF13091 PLD-like domain DGM93_01435 PF13396 Phospholipase_D-nuclease N-terminal DGM93_01450 PF13361 UvrD-like helicase C-terminal domain DGM93_01450 PF00580 UvrD/REP helicase N-terminal domain DGM93_01460 PF14602 Hexapeptide repeat of succinyl-transferase DGM93_01460 PF12464 Maltose acetyltransferase DGM93_01475 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 DGM93_01480 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath DGM93_01485 PF05638 Type VI secretion system effector, Hcp DGM93_01495 PF07024 ImpE protein DGM93_01500 PF04965 Gene 25-like lysozyme DGM93_01505 PF05947 Type VI secretion system, TssF DGM93_01540 PF00872 Transposase, Mutator family DGM93_01565 PF01425 Amidase DGM93_01575 PF03372 Endonuclease/Exonuclease/phosphatase family DGM93_01600 PF04542 Sigma-70 region 2 DGM93_01600 PF08281 Sigma-70, region 4 DGM93_01610 PF03793 PASTA domain DGM93_01610 PF00069 Protein kinase domain DGM93_01625 PF04717 Type VI secretion system, phage-baseplate injector DGM93_01640 PF03466 LysR substrate binding domain DGM93_01640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM93_01645 PF00248 Aldo/keto reductase family DGM93_01650 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE DGM93_01675 PF00069 Protein kinase domain DGM93_01695 PF06812 ImpA, N-terminal, type VI secretion system DGM93_01705 PF01612 3'-5' exonuclease DGM93_01705 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DGM93_01705 PF00476 DNA polymerase family A DGM93_01705 PF01367 5'-3' exonuclease, C-terminal SAM fold DGM93_01715 PF01218 Coproporphyrinogen III oxidase DGM93_01760 PF04820 Tryptophan halogenase DGM93_01765 PF00550 Phosphopantetheine attachment site DGM93_01775 PF01553 Acyltransferase DGM93_01780 PF07977 FabA-like domain DGM93_01830 PF00535 Glycosyl transferase family 2 DGM93_01840 PF02801 Beta-ketoacyl synthase, C-terminal domain DGM93_01840 PF00109 Beta-ketoacyl synthase, N-terminal domain DGM93_01845 PF05166 YcgL domain DGM93_01860 PF00723 Glycosyl hydrolases family 15 DGM93_01865 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DGM93_01865 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DGM93_01890 PF00999 Sodium/hydrogen exchanger family DGM93_01890 PF02254 TrkA-N domain DGM93_01895 PF00194 Eukaryotic-type carbonic anhydrase DGM93_01905 PF01769 Divalent cation transporter DGM93_01905 PF03448 MgtE intracellular N domain DGM93_01905 PF00571 CBS domain DGM93_01910 PF13380 CoA binding domain DGM93_01910 PF13607 Succinyl-CoA ligase like flavodoxin domain DGM93_01910 PF00583 Acetyltransferase (GNAT) family DGM93_01925 PF03477 ATP cone domain DGM93_01925 PF00317 Ribonucleotide reductase, all-alpha domain DGM93_01925 PF02867 Ribonucleotide reductase, barrel domain DGM93_01930 PF00268 Ribonucleotide reductase, small chain DGM93_01950 PF00085 Thioredoxin DGM93_01980 PF02558 Ketopantoate reductase PanE/ApbA DGM93_01980 PF08546 Ketopantoate reductase PanE/ApbA C terminal DGM93_01985 PF01061 ABC-2 type transporter DGM93_01990 PF00005 ABC transporter DGM93_01995 PF00970 Oxidoreductase FAD-binding domain DGM93_01995 PF00111 2Fe-2S iron-sulfur cluster binding domain DGM93_01995 PF00175 Oxidoreductase NAD-binding domain DGM93_02000 PF01545 Cation efflux family DGM93_02005 PF02583 Metal-sensitive transcriptional repressor DGM93_02010 PF01229 Glycosyl hydrolases family 39 DGM93_02020 PF01381 Helix-turn-helix DGM93_02030 PF00005 ABC transporter DGM93_02045 PF04820 Tryptophan halogenase DGM93_02075 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region DGM93_02075 PF00326 Prolyl oligopeptidase family DGM93_02095 PF00490 Delta-aminolevulinic acid dehydratase DGM93_02105 PF00667 FAD binding domain DGM93_02105 PF00258 Flavodoxin DGM93_02105 PF00175 Oxidoreductase NAD-binding domain DGM93_02115 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DGM93_02115 PF01488 Shikimate / quinate 5-dehydrogenase DGM93_02115 PF08501 Shikimate dehydrogenase substrate binding domain DGM93_02130 PF06733 DEAD_2 DGM93_02130 PF13307 Helicase C-terminal domain DGM93_02135 PF00529 HlyD membrane-fusion protein of T1SS DGM93_02135 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DGM93_02145 PF00872 Transposase, Mutator family DGM93_02165 PF06628 Catalase-related immune-responsive DGM93_02165 PF00199 Catalase DGM93_02185 PF01207 Dihydrouridine synthase (Dus) DGM93_02195 PF00486 Transcriptional regulatory protein, C terminal DGM93_02195 PF00072 Response regulator receiver domain DGM93_02200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM93_02215 PF06167 Glucose-regulated metallo-peptidase M90 DGM93_02230 PF08279 HTH domain DGM93_02230 PF03099 Biotin/lipoate A/B protein ligase family DGM93_02230 PF02237 Biotin protein ligase C terminal domain DGM93_02235 PF03309 Type III pantothenate kinase DGM93_02250 PF02223 Thymidylate kinase DGM93_02280 PF00491 Arginase family DGM93_02295 PF05532 CsbD-like DGM93_02300 PF00579 tRNA synthetases class I (W and Y) DGM93_02305 PF00753 Metallo-beta-lactamase superfamily DGM93_02330 PF00892 EamA-like transporter family DGM93_02355 PF00005 ABC transporter DGM93_02360 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DGM93_02365 PF07730 Histidine kinase DGM93_02370 PF00196 Bacterial regulatory proteins, luxR family DGM93_02370 PF00072 Response regulator receiver domain DGM93_02385 PF00199 Catalase DGM93_02400 PF00883 Cytosol aminopeptidase family, catalytic domain DGM93_02400 PF02789 Cytosol aminopeptidase family, N-terminal domain DGM93_02405 PF13419 Haloacid dehalogenase-like hydrolase DGM93_02410 PF01594 AI-2E family transporter DGM93_02430 PF00595 PDZ domain DGM93_02450 PF08521 Two-component sensor kinase N-terminal DGM93_02450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM93_02450 PF00512 His Kinase A (phospho-acceptor) domain DGM93_02455 PF00072 Response regulator receiver domain DGM93_02455 PF00486 Transcriptional regulatory protein, C terminal DGM93_02460 PF08338 Domain of unknown function (DUF1731) DGM93_02460 PF01370 NAD dependent epimerase/dehydratase family DGM93_02500 PF01139 tRNA-splicing ligase RtcB DGM93_02520 PF00440 Bacterial regulatory proteins, tetR family DGM93_02525 PF00970 Oxidoreductase FAD-binding domain DGM93_02525 PF00111 2Fe-2S iron-sulfur cluster binding domain DGM93_02525 PF00175 Oxidoreductase NAD-binding domain DGM93_02530 PF00487 Fatty acid desaturase DGM93_02535 PF00563 EAL domain DGM93_02535 PF12792 CSS motif domain associated with EAL DGM93_02550 PF01078 Magnesium chelatase, subunit ChlI DGM93_02550 PF13335 Magnesium chelatase, subunit ChlI C-terminal DGM93_02555 PF04380 Membrane fusogenic activity DGM93_02560 PF00543 Nitrogen regulatory protein P-II DGM93_02570 PF00963 Cohesin domain DGM93_02570 PF00754 F5/8 type C domain DGM93_02570 PF00041 Fibronectin type III domain DGM93_02570 PF02838 Glycosyl hydrolase family 20, domain 2 DGM93_02570 PF07555 beta-N-acetylglucosaminidase DGM93_02590 PF17284 Spermidine synthase tetramerisation domain DGM93_02595 PF17810 Arginine decarboxylase helical bundle domain DGM93_02595 PF17944 Arginine decarboxylase C-terminal helical extension DGM93_02595 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DGM93_02600 PF00975 Thioesterase domain DGM93_02600 PF13193 AMP-binding enzyme C-terminal domain DGM93_02600 PF00668 Condensation domain DGM93_02600 PF00501 AMP-binding enzyme DGM93_02600 PF00550 Phosphopantetheine attachment site DGM93_02605 PF03033 Glycosyltransferase family 28 N-terminal domain DGM93_02610 PF01757 Acyltransferase family DGM93_02615 PF00106 short chain dehydrogenase DGM93_02630 PF03485 Arginyl tRNA synthetase N terminal domain DGM93_02630 PF05746 DALR anticodon binding domain DGM93_02630 PF00750 tRNA synthetases class I (R) DGM93_02635 PF04002 RadC-like JAB domain DGM93_02640 PF04127 DNA / pantothenate metabolism flavoprotein DGM93_02640 PF02441 Flavoprotein DGM93_02645 PF00692 dUTPase DGM93_02650 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DGM93_02650 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DGM93_02650 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DGM93_02650 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DGM93_02665 PF00535 Glycosyl transferase family 2 DGM93_02670 PF01370 NAD dependent epimerase/dehydratase family DGM93_02680 PF17762 HTH domain found in ParB protein DGM93_02680 PF02195 ParB-like nuclease domain DGM93_02685 PF13614 AAA domain DGM93_02695 PF00156 Phosphoribosyl transferase domain DGM93_02700 PF03372 Endonuclease/Exonuclease/phosphatase family DGM93_02705 PF07690 Major Facilitator Superfamily DGM93_02715 PF03702 Anhydro-N-acetylmuramic acid kinase DGM93_02725 PF01551 Peptidase family M23 DGM93_02725 PF04225 Opacity-associated protein A LysM-like domain DGM93_02730 PF00579 tRNA synthetases class I (W and Y) DGM93_02770 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DGM93_02770 PF02790 Cytochrome C oxidase subunit II, transmembrane domain DGM93_02775 PF00115 Cytochrome C and Quinol oxidase polypeptide I DGM93_02785 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 DGM93_02790 PF00510 Cytochrome c oxidase subunit III DGM93_02815 PF01040 UbiA prenyltransferase family DGM93_02825 PF13593 SBF-like CPA transporter family (DUF4137) DGM93_02830 PF10410 DnaB-helicase binding domain of primase DGM93_02830 PF08278 DNA primase DnaG DnaB-binding DGM93_02830 PF08275 DNA primase catalytic core, N-terminal domain DGM93_02830 PF01807 CHC2 zinc finger DGM93_02835 PF03631 Virulence factor BrkB DGM93_02845 PF09424 Yqey-like protein DGM93_02850 PF01165 Ribosomal protein S21 DGM93_02855 PF00814 Glycoprotease family DGM93_02860 PF02152 Dihydroneopterin aldolase DGM93_02865 PF14310 Fibronectin type III-like domain DGM93_02865 PF00933 Glycosyl hydrolase family 3 N terminal domain DGM93_02865 PF01915 Glycosyl hydrolase family 3 C-terminal domain DGM93_02870 PF07995 Glucose / Sorbosone dehydrogenase DGM93_02875 PF05360 yiaA/B two helix domain DGM93_02880 PF00872 Transposase, Mutator family DGM93_02900 PF13520 Amino acid permease DGM93_02920 PF01510 N-acetylmuramoyl-L-alanine amidase DGM93_02925 PF01427 D-ala-D-ala dipeptidase DGM93_02965 PF07063 Domain of unknown function (DUF1338) DGM93_02980 PF00873 AcrB/AcrD/AcrF family DGM93_02985 PF00873 AcrB/AcrD/AcrF family DGM93_02990 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DGM93_02995 PF07687 Peptidase dimerisation domain DGM93_02995 PF01546 Peptidase family M20/M25/M40 DGM93_03000 PF14489 QueF-like protein DGM93_03000 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term DGM93_03005 PF04972 BON domain DGM93_03005 PF01476 LysM domain DGM93_03015 PF03971 Monomeric isocitrate dehydrogenase DGM93_03030 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) DGM93_03040 PF07498 Rho termination factor, N-terminal domain DGM93_03040 PF07497 Rho termination factor, RNA-binding domain DGM93_03040 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DGM93_03045 PF00085 Thioredoxin DGM93_03050 PF00270 DEAD/DEAH box helicase DGM93_03050 PF00271 Helicase conserved C-terminal domain DGM93_03050 PF12300 ATP-dependent RNA helicase RhlB DGM93_03055 PF00005 ABC transporter DGM93_03060 PF18075 FtsX extracellular domain DGM93_03065 PF00072 Response regulator receiver domain DGM93_03070 PF03167 Uracil DNA glycosylase superfamily DGM93_03075 PF04545 Sigma-70, region 4 DGM93_03075 PF04542 Sigma-70 region 2 DGM93_03080 PF03458 UPF0126 domain DGM93_03085 PF07992 Pyridine nucleotide-disulphide oxidoreductase DGM93_03100 PF00043 Glutathione S-transferase, C-terminal domain DGM93_03100 PF13417 Glutathione S-transferase, N-terminal domain DGM93_03105 PF00270 DEAD/DEAH box helicase DGM93_03105 PF00271 Helicase conserved C-terminal domain DGM93_03105 PF17764 3′ DNA-binding domain (3′BD) DGM93_03105 PF18074 Primosomal protein N C-terminal domain DGM93_03105 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DGM93_03125 PF01554 MatE DGM93_03130 PF01343 Peptidase family S49 DGM93_03155 PF01300 Telomere recombination DGM93_03160 PF01131 DNA topoisomerase DGM93_03160 PF13368 Topoisomerase C-terminal repeat DGM93_03160 PF01751 Toprim domain DGM93_03170 PF07963 Prokaryotic N-terminal methylation motif DGM93_03170 PF00114 Pilin (bacterial filament) DGM93_03175 PF04361 Protein of unknown function (DUF494) DGM93_03180 PF02481 DNA recombination-mediator protein A DGM93_03180 PF17782 DprA winged helix domain DGM93_03185 PF01476 LysM domain DGM93_03190 PF01327 Polypeptide deformylase DGM93_03195 PF02911 Formyl transferase, C-terminal domain DGM93_03195 PF00551 Formyl transferase DGM93_03200 PF01029 NusB family DGM93_03200 PF01189 16S rRNA methyltransferase RsmB/F DGM93_03215 PF00535 Glycosyl transferase family 2 DGM93_03235 PF00925 GTP cyclohydrolase II DGM93_03245 PF03279 Bacterial lipid A biosynthesis acyltransferase DGM93_03250 PF02580 D-Tyr-tRNA(Tyr) deacylase DGM93_03255 PF00140 Sigma-70 factor, region 1.2 DGM93_03255 PF03979 Sigma-70 factor, region 1.1 DGM93_03255 PF04545 Sigma-70, region 4 DGM93_03255 PF04542 Sigma-70 region 2 DGM93_03255 PF04546 Sigma-70, non-essential region DGM93_03255 PF04539 Sigma-70 region 3 DGM93_03280 PF03466 LysR substrate binding domain DGM93_03280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM93_03290 PF00557 Metallopeptidase family M24 DGM93_03300 PF00654 Voltage gated chloride channel DGM93_03305 PF01740 STAS domain DGM93_03305 PF00916 Sulfate permease family DGM93_03330 PF01042 Endoribonuclease L-PSP DGM93_03335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM93_03335 PF03466 LysR substrate binding domain DGM93_03345 PF00005 ABC transporter DGM93_03400 PF00872 Transposase, Mutator family DGM93_03405 PF00295 Glycosyl hydrolases family 28 DGM93_03410 PF13406 Transglycosylase SLT domain DGM93_03415 PF03330 Lytic transglycolase DGM93_03415 PF05036 Sporulation related domain DGM93_03420 PF00768 D-alanyl-D-alanine carboxypeptidase DGM93_03420 PF07943 Penicillin-binding protein 5, C-terminal domain DGM93_03430 PF04359 Protein of unknown function (DUF493) DGM93_03435 PF03099 Biotin/lipoate A/B protein ligase family DGM93_03440 PF04055 Radical SAM superfamily DGM93_03440 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family DGM93_03445 PF11818 C-terminal domain of tail specific protease (DUF3340) DGM93_03445 PF00595 PDZ domain DGM93_03445 PF03572 Peptidase family S41 DGM93_03445 PF17804 Tail specific protease N-terminal domain DGM93_03455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM93_03455 PF03466 LysR substrate binding domain DGM93_03465 PF00293 NUDIX domain DGM93_03465 PF01467 Cytidylyltransferase-like DGM93_03500 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DGM93_03500 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DGM93_03505 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DGM93_03505 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DGM93_03510 PF04972 BON domain DGM93_03515 PF00360 Phytochrome region DGM93_03515 PF08446 PAS fold DGM93_03515 PF01590 GAF domain DGM93_03515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM93_03515 PF00512 His Kinase A (phospho-acceptor) domain DGM93_03520 PF00072 Response regulator receiver domain DGM93_03525 PF00512 His Kinase A (phospho-acceptor) domain DGM93_03525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM93_03530 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DGM93_03575 PF03958 Bacterial type II/III secretion system short domain DGM93_03575 PF00263 Bacterial type II and III secretion system protein DGM93_03580 PF00437 Type II/IV secretion system protein DGM93_03585 PF00482 Type II secretion system (T2SS), protein F DGM93_03590 PF07963 Prokaryotic N-terminal methylation motif DGM93_03590 PF08334 Type II secretion system (T2SS), protein G DGM93_03595 PF12019 Type II transport protein GspH DGM93_03595 PF07963 Prokaryotic N-terminal methylation motif DGM93_03600 PF07963 Prokaryotic N-terminal methylation motif DGM93_03600 PF02501 Type II secretion system (T2SS), protein I DGM93_03605 PF11612 Type II secretion system (T2SS), protein J DGM93_03605 PF07963 Prokaryotic N-terminal methylation motif DGM93_03610 PF03934 Type II secretion system (T2SS), protein K DGM93_03630 PF07702 UTRA domain DGM93_03630 PF00392 Bacterial regulatory proteins, gntR family DGM93_03635 PF07690 Major Facilitator Superfamily DGM93_03640 PF00356 Bacterial regulatory proteins, lacI family DGM93_03645 PF01380 SIS domain DGM93_03650 PF01979 Amidohydrolase family DGM93_03660 PF01743 Poly A polymerase head domain DGM93_03660 PF01966 HD domain DGM93_03660 PF12627 Probable RNA and SrmB- binding site of polymerase A DGM93_03665 PF01464 Transglycosylase SLT domain DGM93_03665 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain DGM93_03670 PF07715 TonB-dependent Receptor Plug Domain DGM93_03670 PF00593 TonB dependent receptor DGM93_03680 PF08264 Anticodon-binding domain of tRNA DGM93_03680 PF10458 Valyl tRNA synthetase tRNA binding arm DGM93_03680 PF00133 tRNA synthetases class I (I, L, M and V) DGM93_03695 PF00883 Cytosol aminopeptidase family, catalytic domain DGM93_03695 PF02789 Cytosol aminopeptidase family, N-terminal domain DGM93_03705 PF03739 Lipopolysaccharide export system permease LptF/LptG DGM93_03720 PF02899 Phage integrase, N-terminal SAM-like domain DGM93_03720 PF00589 Phage integrase family DGM93_03735 PF10411 Disulfide bond isomerase protein N-terminus DGM93_03735 PF13098 Thioredoxin-like domain DGM93_03745 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal DGM93_03745 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DGM93_03745 PF02769 AIR synthase related protein, C-terminal domain DGM93_03750 PF03895 YadA-like membrane anchor domain DGM93_03750 PF05658 Head domain of trimeric autotransporter adhesin DGM93_03750 PF13018 Extended Signal Peptide of Type V secretion system DGM93_03750 PF05662 Coiled stalk of trimeric autotransporter adhesin DGM93_03755 PF00082 Subtilase family DGM93_03755 PF04151 Bacterial pre-peptidase C-terminal domain DGM93_03760 PF05658 Head domain of trimeric autotransporter adhesin DGM93_03760 PF05662 Coiled stalk of trimeric autotransporter adhesin DGM93_03760 PF13018 Extended Signal Peptide of Type V secretion system DGM93_03760 PF03895 YadA-like membrane anchor domain DGM93_03765 PF00082 Subtilase family DGM93_03765 PF04151 Bacterial pre-peptidase C-terminal domain DGM93_03770 PF00437 Type II/IV secretion system protein DGM93_03770 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DGM93_03780 PF00482 Type II secretion system (T2SS), protein F DGM93_03785 PF08334 Type II secretion system (T2SS), protein G DGM93_03790 PF12019 Type II transport protein GspH DGM93_03795 PF07963 Prokaryotic N-terminal methylation motif DGM93_03805 PF03934 Type II secretion system (T2SS), protein K DGM93_03810 PF05137 Fimbrial assembly protein (PilN) DGM93_03815 PF10741 Type II secretion system (T2SS), protein M subtype b DGM93_03825 PF00263 Bacterial type II and III secretion system protein DGM93_03825 PF03958 Bacterial type II/III secretion system short domain DGM93_03835 PF00392 Bacterial regulatory proteins, gntR family DGM93_03835 PF07702 UTRA domain DGM93_03845 PF00593 TonB dependent receptor DGM93_03845 PF07715 TonB-dependent Receptor Plug Domain DGM93_03865 PF05598 Transposase domain (DUF772) DGM93_03865 PF01609 Transposase DDE domain DGM93_03915 PF07238 PilZ domain DGM93_03915 PF00535 Glycosyl transferase family 2 DGM93_03915 PF03552 Cellulose synthase DGM93_03920 PF03170 Bacterial cellulose synthase subunit DGM93_03925 PF01270 Glycosyl hydrolases family 8 DGM93_03945 PF03960 ArsC family DGM93_03950 PF01327 Polypeptide deformylase DGM93_03955 PF00005 ABC transporter DGM93_03955 PF12848 ABC transporter DGM93_03965 PF00464 Serine hydroxymethyltransferase DGM93_03970 PF03477 ATP cone domain DGM93_03980 PF01872 RibD C-terminal domain DGM93_03980 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DGM93_03990 PF00677 Lumazine binding domain DGM93_03995 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DGM93_03995 PF00925 GTP cyclohydrolase II DGM93_04000 PF00885 6,7-dimethyl-8-ribityllumazine synthase DGM93_04005 PF01029 NusB family DGM93_04010 PF02769 AIR synthase related protein, C-terminal domain DGM93_04010 PF00586 AIR synthase related protein, N-terminal domain DGM93_04030 PF03814 Potassium-transporting ATPase A subunit DGM93_04040 PF02669 K+-transporting ATPase, c chain DGM93_04045 PF02702 Osmosensitive K+ channel His kinase sensor domain DGM93_04045 PF13493 Domain of unknown function (DUF4118) DGM93_04045 PF00512 His Kinase A (phospho-acceptor) domain DGM93_04045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM93_04045 PF13492 GAF domain DGM93_04050 PF00072 Response regulator receiver domain DGM93_04050 PF00486 Transcriptional regulatory protein, C terminal DGM93_04060 PF02913 FAD linked oxidases, C-terminal domain DGM93_04060 PF01565 FAD binding domain DGM93_04065 PF04307 LexA-binding, inner membrane-associated putative hydrolase DGM93_04070 PF02021 Uncharacterised protein family UPF0102 DGM93_04075 PF04348 LppC putative lipoprotein DGM93_04080 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DGM93_04105 PF02381 MraZ protein, putative antitoxin-like DGM93_04110 PF01795 MraW methylase family DGM93_04115 PF04999 Cell division protein FtsL DGM93_04120 PF03717 Penicillin-binding Protein dimerisation domain DGM93_04120 PF00905 Penicillin binding protein transpeptidase domain DGM93_04125 PF08245 Mur ligase middle domain DGM93_04125 PF02875 Mur ligase family, glutamate ligase domain DGM93_04125 PF01225 Mur ligase family, catalytic domain DGM93_04130 PF01225 Mur ligase family, catalytic domain DGM93_04130 PF02875 Mur ligase family, glutamate ligase domain DGM93_04130 PF08245 Mur ligase middle domain DGM93_04135 PF00953 Glycosyl transferase family 4 DGM93_04140 PF01098 Cell cycle protein DGM93_04145 PF03033 Glycosyltransferase family 28 N-terminal domain DGM93_04145 PF04101 Glycosyltransferase family 28 C-terminal domain DGM93_04150 PF08245 Mur ligase middle domain DGM93_04150 PF02875 Mur ligase family, glutamate ligase domain DGM93_04150 PF01225 Mur ligase family, catalytic domain DGM93_04155 PF07478 D-ala D-ala ligase C-terminus DGM93_04155 PF01820 D-ala D-ala ligase N-terminus DGM93_04160 PF03799 Cell division protein FtsQ DGM93_04160 PF08478 POTRA domain, FtsQ-type DGM93_04165 PF02491 SHS2 domain inserted in FTSA DGM93_04170 PF12327 FtsZ family, C-terminal domain DGM93_04170 PF00091 Tubulin/FtsZ family, GTPase domain DGM93_04175 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase DGM93_04185 PF01551 Peptidase family M23 DGM93_04185 PF01476 LysM domain DGM93_04185 PF08525 Opacity-associated protein A N-terminal motif DGM93_04190 PF07516 SecA Wing and Scaffold domain DGM93_04190 PF01043 SecA preprotein cross-linking domain DGM93_04190 PF07517 SecA DEAD-like domain DGM93_04190 PF02810 SEC-C motif DGM93_04195 PF00293 NUDIX domain DGM93_04205 PF02219 Methylenetetrahydrofolate reductase DGM93_04215 PF08240 Alcohol dehydrogenase GroES-like domain DGM93_04215 PF00698 Acyl transferase domain DGM93_04215 PF02801 Beta-ketoacyl synthase, C-terminal domain DGM93_04215 PF00109 Beta-ketoacyl synthase, N-terminal domain DGM93_04215 PF14765 Polyketide synthase dehydratase DGM93_04215 PF00550 Phosphopantetheine attachment site DGM93_04215 PF08659 KR domain DGM93_04215 PF00107 Zinc-binding dehydrogenase DGM93_04215 PF16197 Ketoacyl-synthetase C-terminal extension DGM93_04220 PF09286 Pro-kumamolisin, activation domain DGM93_04220 PF00082 Subtilase family DGM93_04230 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DGM93_04235 PF00128 Alpha amylase, catalytic domain DGM93_04255 PF00685 Sulfotransferase domain DGM93_04265 PF05175 Methyltransferase small domain DGM93_04270 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DGM93_04270 PF05221 S-adenosyl-L-homocysteine hydrolase DGM93_04280 PF00311 Phosphoenolpyruvate carboxylase DGM93_04315 PF00328 Histidine phosphatase superfamily (branch 2) DGM93_04320 PF02773 S-adenosylmethionine synthetase, C-terminal domain DGM93_04320 PF02772 S-adenosylmethionine synthetase, central domain DGM93_04320 PF00438 S-adenosylmethionine synthetase, N-terminal domain DGM93_04330 PF13649 Methyltransferase domain DGM93_04335 PF01207 Dihydrouridine synthase (Dus) DGM93_04350 PF00294 pfkB family carbohydrate kinase DGM93_04355 PF07670 Nucleoside recognition DGM93_04355 PF01773 Na+ dependent nucleoside transporter N-terminus DGM93_04355 PF07662 Na+ dependent nucleoside transporter C-terminus DGM93_04360 PF00248 Aldo/keto reductase family DGM93_04370 PF07715 TonB-dependent Receptor Plug Domain DGM93_04370 PF00593 TonB dependent receptor DGM93_04390 PF00528 Binding-protein-dependent transport system inner membrane component DGM93_04395 PF00005 ABC transporter DGM93_04405 PF02668 Taurine catabolism dioxygenase TauD, TfdA family DGM93_04415 PF00005 ABC transporter DGM93_04420 PF13472 GDSL-like Lipase/Acylhydrolase family DGM93_04425 PF00486 Transcriptional regulatory protein, C terminal DGM93_04425 PF00072 Response regulator receiver domain DGM93_04430 PF08521 Two-component sensor kinase N-terminal DGM93_04430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM93_04430 PF00512 His Kinase A (phospho-acceptor) domain DGM93_04440 PF01219 Prokaryotic diacylglycerol kinase DGM93_04450 PF04536 TPM domain DGM93_04460 PF01790 Prolipoprotein diacylglyceryl transferase DGM93_04465 PF00303 Thymidylate synthase DGM93_04475 PF00186 Dihydrofolate reductase DGM93_04480 PF00149 Calcineurin-like phosphoesterase DGM93_04485 PF04379 ApaG domain DGM93_04490 PF00398 Ribosomal RNA adenine dimethylase DGM93_04495 PF04166 Pyridoxal phosphate biosynthetic protein PdxA DGM93_04500 PF00639 PPIC-type PPIASE domain DGM93_04500 PF09312 SurA N-terminal domain DGM93_04505 PF03968 OstA-like protein DGM93_04505 PF04453 LPS transport system D DGM93_04520 PF00850 Histone deacetylase domain DGM93_04525 PF01923 Cobalamin adenosyltransferase DGM93_04540 PF01494 FAD binding domain DGM93_04545 PF01494 FAD binding domain DGM93_04565 PF07729 FCD domain DGM93_04565 PF00392 Bacterial regulatory proteins, gntR family DGM93_04570 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DGM93_04575 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit DGM93_04575 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DGM93_04580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM93_04580 PF03466 LysR substrate binding domain DGM93_04585 PF00501 AMP-binding enzyme DGM93_04585 PF13193 AMP-binding enzyme C-terminal domain DGM93_04595 PF00378 Enoyl-CoA hydratase/isomerase DGM93_04615 PF08450 SMP-30/Gluconolactonase/LRE-like region DGM93_04620 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DGM93_04620 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DGM93_04625 PF01728 FtsJ-like methyltransferase DGM93_04625 PF18125 RlmM ferredoxin-like domain DGM93_04645 PF00892 EamA-like transporter family DGM93_04655 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain DGM93_04655 PF00749 tRNA synthetases class I (E and Q), catalytic domain DGM93_04670 PF00072 Response regulator receiver domain DGM93_04670 PF00990 Diguanylate cyclase, GGDEF domain DGM93_04675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM93_04675 PF00512 His Kinase A (phospho-acceptor) domain DGM93_04675 PF00672 HAMP domain DGM93_04675 PF01627 Hpt domain DGM93_04675 PF00072 Response regulator receiver domain DGM93_04675 PF17149 Periplasmic sensor domain found in signal transduction proteins DGM93_04680 PF00196 Bacterial regulatory proteins, luxR family DGM93_04680 PF00072 Response regulator receiver domain DGM93_04690 PF01625 Peptide methionine sulfoxide reductase DGM93_04705 PF00923 Transaldolase/Fructose-6-phosphate aldolase DGM93_04710 PF01272 Transcription elongation factor, GreA/GreB, C-term DGM93_04710 PF14760 Rnk N-terminus DGM93_04720 PF03466 LysR substrate binding domain DGM93_04720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM93_04725 PF07992 Pyridine nucleotide-disulphide oxidoreductase DGM93_04725 PF13192 Thioredoxin domain DGM93_04730 PF00578 AhpC/TSA family DGM93_04730 PF10417 C-terminal domain of 1-Cys peroxiredoxin DGM93_04735 PF17827 PrmC N-terminal domain DGM93_04735 PF05175 Methyltransferase small domain DGM93_04740 PF00561 alpha/beta hydrolase fold DGM93_04750 PF00293 NUDIX domain DGM93_04755 PF01367 5'-3' exonuclease, C-terminal SAM fold DGM93_04755 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DGM93_04755 PF00476 DNA polymerase family A DGM93_04755 PF01612 3'-5' exonuclease DGM93_04795 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DGM93_04795 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DGM93_04795 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch DGM93_04810 PF01063 Amino-transferase class IV DGM93_04815 PF00082 Subtilase family DGM93_04815 PF04151 Bacterial pre-peptidase C-terminal domain DGM93_04820 PF00082 Subtilase family DGM93_04820 PF04151 Bacterial pre-peptidase C-terminal domain DGM93_04825 PF00082 Subtilase family DGM93_04825 PF04151 Bacterial pre-peptidase C-terminal domain DGM93_04840 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain DGM93_04840 PF17189 Glycosyl hydrolase family 30 beta sandwich domain DGM93_04850 PF03358 NADPH-dependent FMN reductase DGM93_04855 PF03631 Virulence factor BrkB DGM93_04860 PF08534 Redoxin DGM93_04865 PF00708 Acylphosphatase DGM93_04875 PF03976 Polyphosphate kinase 2 (PPK2) DGM93_04880 PF00994 Probable molybdopterin binding domain DGM93_04890 PF03462 PCRF domain DGM93_04890 PF00472 RF-1 domain DGM93_04895 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DGM93_04895 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DGM93_04895 PF01488 Shikimate / quinate 5-dehydrogenase DGM93_04905 PF03550 Outer membrane lipoprotein LolB DGM93_04910 PF08544 GHMP kinases C terminal DGM93_04910 PF00288 GHMP kinases N terminal domain DGM93_04920 PF14572 Phosphoribosyl synthetase-associated domain DGM93_04920 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DGM93_04925 PF01386 Ribosomal L25p family DGM93_04925 PF14693 Ribosomal protein TL5, C-terminal domain DGM93_04930 PF01195 Peptidyl-tRNA hydrolase DGM93_04935 PF01926 50S ribosome-binding GTPase DGM93_04935 PF06071 Protein of unknown function (DUF933) DGM93_04955 PF00009 Elongation factor Tu GTP binding domain DGM93_04955 PF03144 Elongation factor Tu domain 2 DGM93_04955 PF03143 Elongation factor Tu C-terminal domain DGM93_04965 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DGM93_04970 PF02357 Transcription termination factor nusG DGM93_04970 PF00467 KOW motif DGM93_04975 PF03946 Ribosomal protein L11, N-terminal domain DGM93_04975 PF00298 Ribosomal protein L11, RNA binding domain DGM93_04980 PF00687 Ribosomal protein L1p/L10e family DGM93_04985 PF00466 Ribosomal protein L10 DGM93_04990 PF16320 Ribosomal protein L7/L12 dimerisation domain DGM93_04990 PF00542 Ribosomal protein L7/L12 C-terminal domain DGM93_04995 PF04563 RNA polymerase beta subunit DGM93_04995 PF04561 RNA polymerase Rpb2, domain 2 DGM93_04995 PF04565 RNA polymerase Rpb2, domain 3 DGM93_04995 PF10385 RNA polymerase beta subunit external 1 domain DGM93_04995 PF00562 RNA polymerase Rpb2, domain 6 DGM93_04995 PF04560 RNA polymerase Rpb2, domain 7 DGM93_05000 PF04997 RNA polymerase Rpb1, domain 1 DGM93_05000 PF00623 RNA polymerase Rpb1, domain 2 DGM93_05000 PF04983 RNA polymerase Rpb1, domain 3 DGM93_05000 PF05000 RNA polymerase Rpb1, domain 4 DGM93_05000 PF04998 RNA polymerase Rpb1, domain 5 DGM93_05005 PF00164 Ribosomal protein S12/S23 DGM93_05010 PF00177 Ribosomal protein S7p/S5e DGM93_05015 PF14492 Elongation Factor G, domain II DGM93_05015 PF00679 Elongation factor G C-terminus DGM93_05015 PF00009 Elongation factor Tu GTP binding domain DGM93_05015 PF03764 Elongation factor G, domain IV DGM93_05015 PF03144 Elongation factor Tu domain 2 DGM93_05020 PF03144 Elongation factor Tu domain 2 DGM93_05020 PF00009 Elongation factor Tu GTP binding domain DGM93_05020 PF03143 Elongation factor Tu C-terminal domain DGM93_05035 PF00872 Transposase, Mutator family DGM93_05040 PF00338 Ribosomal protein S10p/S20e DGM93_05045 PF00297 Ribosomal protein L3 DGM93_05050 PF00573 Ribosomal protein L4/L1 family DGM93_05055 PF00276 Ribosomal protein L23 DGM93_05060 PF00181 Ribosomal Proteins L2, RNA binding domain DGM93_05060 PF03947 Ribosomal Proteins L2, C-terminal domain DGM93_05065 PF00203 Ribosomal protein S19 DGM93_05070 PF00237 Ribosomal protein L22p/L17e DGM93_05075 PF07650 KH domain DGM93_05075 PF00189 Ribosomal protein S3, C-terminal domain DGM93_05080 PF00252 Ribosomal protein L16p/L10e DGM93_05085 PF00831 Ribosomal L29 protein DGM93_05090 PF00366 Ribosomal protein S17 DGM93_05095 PF00238 Ribosomal protein L14p/L23e DGM93_05100 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DGM93_05100 PF00467 KOW motif DGM93_05105 PF00281 Ribosomal protein L5 DGM93_05105 PF00673 ribosomal L5P family C-terminus DGM93_05110 PF00253 Ribosomal protein S14p/S29e DGM93_05115 PF00410 Ribosomal protein S8 DGM93_05120 PF00347 Ribosomal protein L6 DGM93_05125 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DGM93_05130 PF00333 Ribosomal protein S5, N-terminal domain DGM93_05130 PF03719 Ribosomal protein S5, C-terminal domain DGM93_05135 PF00327 Ribosomal protein L30p/L7e DGM93_05140 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DGM93_05145 PF00344 SecY translocase DGM93_05150 PF00416 Ribosomal protein S13/S18 DGM93_05155 PF00411 Ribosomal protein S11 DGM93_05160 PF00163 Ribosomal protein S4/S9 N-terminal domain DGM93_05160 PF01479 S4 domain DGM93_05165 PF01000 RNA polymerase Rpb3/RpoA insert domain DGM93_05165 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DGM93_05165 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DGM93_05170 PF01196 Ribosomal protein L17 DGM93_05175 PF02600 Disulfide bond formation protein DsbB DGM93_05195 PF01474 Class-II DAHP synthetase family DGM93_05205 PF01425 Amidase DGM93_05215 PF00679 Elongation factor G C-terminus DGM93_05215 PF00009 Elongation factor Tu GTP binding domain DGM93_05215 PF03144 Elongation factor Tu domain 2 DGM93_05220 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DGM93_05225 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DGM93_05225 PF00056 lactate/malate dehydrogenase, NAD binding domain DGM93_05230 PF00043 Glutathione S-transferase, C-terminal domain DGM93_05230 PF02798 Glutathione S-transferase, N-terminal domain DGM93_05250 PF07992 Pyridine nucleotide-disulphide oxidoreductase DGM93_05250 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DGM93_05255 PF00107 Zinc-binding dehydrogenase DGM93_05255 PF08240 Alcohol dehydrogenase GroES-like domain DGM93_05265 PF01609 Transposase DDE domain DGM93_05265 PF05598 Transposase domain (DUF772) DGM93_05270 PF00223 Photosystem I psaA/psaB protein DGM93_05270 PF00691 OmpA family DGM93_05280 PF00849 RNA pseudouridylate synthase DGM93_05290 PF00155 Aminotransferase class I and II DGM93_05300 PF00528 Binding-protein-dependent transport system inner membrane component DGM93_05305 PF00528 Binding-protein-dependent transport system inner membrane component DGM93_05310 PF12857 TOBE-like domain DGM93_05310 PF17850 CysA C-terminal regulatory domain DGM93_05310 PF00005 ABC transporter DGM93_05320 PF08240 Alcohol dehydrogenase GroES-like domain DGM93_05320 PF00107 Zinc-binding dehydrogenase DGM93_05330 PF04185 Phosphoesterase family DGM93_05330 PF05506 Domain of unknown function (DUF756) DGM93_05335 PF10459 Peptidase S46 DGM93_05340 PF00300 Histidine phosphatase superfamily (branch 1) DGM93_05350 PF02875 Mur ligase family, glutamate ligase domain DGM93_05350 PF08245 Mur ligase middle domain DGM93_05365 PF00156 Phosphoribosyl transferase domain DGM93_05370 PF04305 Protein of unknown function (DUF455) DGM93_05390 PF00149 Calcineurin-like phosphoesterase DGM93_05395 PF01569 PAP2 superfamily DGM93_05400 PF00534 Glycosyl transferases group 1 DGM93_05400 PF13439 Glycosyltransferase Family 4 DGM93_05405 PF02541 Ppx/GppA phosphatase family DGM93_05410 PF17941 Polyphosphate kinase C-terminal domain 1 DGM93_05410 PF13090 Polyphosphate kinase C-terminal domain 2 DGM93_05410 PF02503 Polyphosphate kinase middle domain DGM93_05410 PF13089 Polyphosphate kinase N-terminal domain DGM93_05415 PF00989 PAS fold DGM93_05415 PF11808 Phosphate regulon sensor protein PhoR DGM93_05415 PF00512 His Kinase A (phospho-acceptor) domain DGM93_05415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM93_05420 PF00072 Response regulator receiver domain DGM93_05420 PF00486 Transcriptional regulatory protein, C terminal DGM93_05425 PF13181 Tetratricopeptide repeat DGM93_05425 PF01435 Peptidase family M48 DGM93_05430 PF00462 Glutaredoxin DGM93_05440 PF18324 Hypothetical protein TT1725 DGM93_05440 PF00180 Isocitrate/isopropylmalate dehydrogenase DGM93_05480 PF00872 Transposase, Mutator family DGM93_05495 PF05698 Bacterial trigger factor protein (TF) C-terminus DGM93_05495 PF05697 Bacterial trigger factor protein (TF) DGM93_05500 PF00574 Clp protease DGM93_05505 PF07724 AAA domain (Cdc48 subfamily) DGM93_05505 PF10431 C-terminal, D2-small domain, of ClpB protein DGM93_05505 PF06689 ClpX C4-type zinc finger DGM93_05510 PF00004 ATPase family associated with various cellular activities (AAA) DGM93_05510 PF05362 Lon protease (S16) C-terminal proteolytic domain DGM93_05510 PF02190 ATP-dependent protease La (LON) substrate-binding domain DGM93_05515 PF00216 Bacterial DNA-binding protein DGM93_05540 PF05257 CHAP domain DGM93_05540 PF01476 LysM domain DGM93_05545 PF16123 Hydroxyacylglutathione hydrolase C-terminus DGM93_05545 PF00753 Metallo-beta-lactamase superfamily DGM93_05555 PF00075 RNase H DGM93_05560 PF00929 Exonuclease DGM93_05590 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DGM93_05600 PF00753 Metallo-beta-lactamase superfamily DGM93_05600 PF12706 Beta-lactamase superfamily domain DGM93_05605 PF04055 Radical SAM superfamily DGM93_05605 PF06463 Molybdenum Cofactor Synthesis C DGM93_05615 PF01967 MoaC family DGM93_05620 PF02597 ThiS family DGM93_05625 PF02391 MoaE protein DGM93_05640 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding DGM93_05640 PF12169 DNA polymerase III subunits gamma and tau domain III DGM93_05640 PF12170 DNA polymerase III tau subunit V interacting with alpha DGM93_05645 PF02575 YbaB/EbfC DNA-binding family DGM93_05650 PF13662 Toprim domain DGM93_05650 PF02132 RecR protein DGM93_05655 PF01230 HIT domain DGM93_05665 PF13559 Domain of unknown function (DUF4129) DGM93_05665 PF01841 Transglutaminase-like superfamily DGM93_05665 PF11992 Domain of unknown function (DUF3488) DGM93_05675 PF17863 AAA lid domain DGM93_05675 PF07726 ATPase family associated with various cellular activities (AAA) DGM93_05690 PF02545 Maf-like protein DGM93_05695 PF02620 Large ribosomal RNA subunit accumulation protein YceD DGM93_05700 PF01783 Ribosomal L32p protein family DGM93_05705 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DGM93_05705 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DGM93_05715 PF00698 Acyl transferase domain DGM93_05725 PF00550 Phosphopantetheine attachment site DGM93_05730 PF00109 Beta-ketoacyl synthase, N-terminal domain DGM93_05730 PF02801 Beta-ketoacyl synthase, C-terminal domain DGM93_05735 PF00425 chorismate binding enzyme DGM93_05735 PF04715 Anthranilate synthase component I, N terminal region DGM93_05740 PF02618 YceG-like family DGM93_05745 PF09115 DNA polymerase III, delta subunit, C terminal DGM93_05775 PF02954 Bacterial regulatory protein, Fis family DGM93_05775 PF06506 Propionate catabolism activator DGM93_05775 PF00158 Sigma-54 interaction domain DGM93_05785 PF00285 Citrate synthase, C-terminal domain DGM93_05790 PF00330 Aconitase family (aconitate hydratase) DGM93_05790 PF00694 Aconitase C-terminal domain DGM93_05800 PF04303 PrpF protein DGM93_05805 PF00593 TonB dependent receptor DGM93_05805 PF07715 TonB-dependent Receptor Plug Domain DGM93_05825 PF07703 Alpha-2-macroglobulin bait region domain DGM93_05825 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain DGM93_05825 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain DGM93_05825 PF11974 Bacterial alpha-2-macroglobulin MG3 domain DGM93_05825 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain DGM93_05825 PF17962 Bacterial macroglobulin domain 6 DGM93_05825 PF01835 MG2 domain DGM93_05825 PF00207 Alpha-2-macroglobulin family DGM93_05850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM93_05850 PF00512 His Kinase A (phospho-acceptor) domain DGM93_05850 PF00989 PAS fold DGM93_05855 PF00905 Penicillin binding protein transpeptidase domain DGM93_05855 PF06832 Penicillin-Binding Protein C-terminus Family DGM93_05855 PF00912 Transglycosylase DGM93_05865 PF08534 Redoxin DGM93_05875 PF00226 DnaJ domain DGM93_05875 PF01556 DnaJ C terminal domain DGM93_05880 PF00072 Response regulator receiver domain DGM93_05885 PF01145 SPFH domain / Band 7 family DGM93_05885 PF12221 Bacterial membrane protein N terminal DGM93_05890 PF01145 SPFH domain / Band 7 family DGM93_05900 PF00709 Adenylosuccinate synthetase DGM93_05905 PF11838 ERAP1-like C-terminal domain DGM93_05905 PF01433 Peptidase family M1 domain DGM93_05920 PF00440 Bacterial regulatory proteins, tetR family DGM93_05980 PF01256 Carbohydrate kinase DGM93_05990 PF00723 Glycosyl hydrolases family 15 DGM93_06005 PF07971 Glycosyl hydrolase family 92 DGM93_06005 PF17678 Glycosyl hydrolase family 92 N-terminal domain DGM93_06030 PF07992 Pyridine nucleotide-disulphide oxidoreductase DGM93_06050 PF17755 UvrA DNA-binding domain DGM93_06060 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DGM93_06060 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DGM93_06065 PF03450 CO dehydrogenase flavoprotein C-terminal domain DGM93_06065 PF00941 FAD binding domain in molybdopterin dehydrogenase DGM93_06070 PF00111 2Fe-2S iron-sulfur cluster binding domain DGM93_06070 PF01799 [2Fe-2S] binding domain DGM93_06105 PF00717 Peptidase S24-like DGM93_06105 PF01726 LexA DNA binding domain DGM93_06120 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DGM93_06120 PF14579 Helix-hairpin-helix motif DGM93_06120 PF02811 PHP domain DGM93_06120 PF07733 Bacterial DNA polymerase III alpha NTPase domain DGM93_06130 PF00326 Prolyl oligopeptidase family DGM93_06140 PF03169 OPT oligopeptide transporter protein DGM93_06170 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region DGM93_06170 PF07676 WD40-like Beta Propeller Repeat DGM93_06170 PF00326 Prolyl oligopeptidase family DGM93_06210 PF02311 AraC-like ligand binding domain DGM93_06210 PF12833 Helix-turn-helix domain DGM93_06225 PF00872 Transposase, Mutator family DGM93_06240 PF00199 Catalase DGM93_06240 PF06628 Catalase-related immune-responsive DGM93_06240 PF18011 C-terminal domain found in long catalases DGM93_06245 PF00248 Aldo/keto reductase family DGM93_06250 PF00135 Carboxylesterase family DGM93_06255 PF02347 Glycine cleavage system P-protein DGM93_06275 PF00664 ABC transporter transmembrane region DGM93_06275 PF00005 ABC transporter DGM93_06275 PF03412 Peptidase C39 family DGM93_06305 PF01527 Transposase DGM93_06315 PF08019 Phosphoethanolamine transferase EptA/EptB DGM93_06315 PF00884 Sulfatase DGM93_06330 PF00072 Response regulator receiver domain DGM93_06330 PF00486 Transcriptional regulatory protein, C terminal DGM93_06335 PF08521 Two-component sensor kinase N-terminal DGM93_06335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM93_06335 PF00512 His Kinase A (phospho-acceptor) domain DGM93_06345 PF03776 Septum formation topological specificity factor MinE DGM93_06350 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DGM93_06355 PF05209 Septum formation inhibitor MinC, N-terminal domain DGM93_06355 PF03775 Septum formation inhibitor MinC, C-terminal domain DGM93_06370 PF07730 Histidine kinase DGM93_06375 PF00072 Response regulator receiver domain DGM93_06375 PF00196 Bacterial regulatory proteins, luxR family DGM93_06390 PF00730 HhH-GPD superfamily base excision DNA repair protein DGM93_06420 PF02222 ATP-grasp domain DGM93_06430 PF04377 Arginine-tRNA-protein transferase, C terminus DGM93_06430 PF04376 Arginine-tRNA-protein transferase, N terminus DGM93_06445 PF04542 Sigma-70 region 2 DGM93_06445 PF08281 Sigma-70, region 4 DGM93_06460 PF00378 Enoyl-CoA hydratase/isomerase DGM93_06475 PF17760 UvrA interaction domain DGM93_06475 PF00005 ABC transporter DGM93_06475 PF17755 UvrA DNA-binding domain DGM93_06480 PF00829 Ribosomal prokaryotic L21 protein DGM93_06485 PF01016 Ribosomal L27 protein DGM93_06490 PF01018 GTP1/OBG DGM93_06490 PF01926 50S ribosome-binding GTPase DGM93_06495 PF01649 Ribosomal protein S20 DGM93_06500 PF03023 Lipid II flippase MurJ DGM93_06505 PF06574 FAD synthetase DGM93_06505 PF01687 Riboflavin kinase DGM93_06510 PF08264 Anticodon-binding domain of tRNA DGM93_06510 PF00133 tRNA synthetases class I (I, L, M and V) DGM93_06510 PF06827 Zinc finger found in FPG and IleRS DGM93_06515 PF01252 Signal peptidase (SPase) II DGM93_06520 PF02401 LytB protein DGM93_06530 PF06481 COX Aromatic Rich Motif DGM93_06530 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DGM93_06535 PF00115 Cytochrome C and Quinol oxidase polypeptide I DGM93_06540 PF00510 Cytochrome c oxidase subunit III DGM93_06545 PF03626 Prokaryotic Cytochrome C oxidase subunit IV DGM93_06555 PF18073 Rubredoxin metal binding domain DGM93_06560 PF05656 Protein of unknown function (DUF805) DGM93_06570 PF12833 Helix-turn-helix domain DGM93_06575 PF00183 Hsp90 protein DGM93_06575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM93_06585 PF01740 STAS domain DGM93_06585 PF08678 Rsbr N terminal DGM93_06590 PF01740 STAS domain DGM93_06605 PF00072 Response regulator receiver domain DGM93_06605 PF17149 Periplasmic sensor domain found in signal transduction proteins DGM93_06605 PF01627 Hpt domain DGM93_06605 PF00672 HAMP domain DGM93_06605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM93_06605 PF00512 His Kinase A (phospho-acceptor) domain DGM93_06610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM93_06610 PF00512 His Kinase A (phospho-acceptor) domain DGM93_06610 PF08448 PAS fold DGM93_06610 PF13188 PAS domain DGM93_06610 PF00072 Response regulator receiver domain DGM93_06615 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain DGM93_06615 PF04616 Glycosyl hydrolases family 43 DGM93_06620 PF07715 TonB-dependent Receptor Plug Domain DGM93_06620 PF00593 TonB dependent receptor DGM93_06625 PF00085 Thioredoxin DGM93_06630 PF07237 Protein of unknown function (DUF1428) DGM93_06635 PF13493 Domain of unknown function (DUF4118) DGM93_06635 PF02702 Osmosensitive K+ channel His kinase sensor domain DGM93_06635 PF00512 His Kinase A (phospho-acceptor) domain DGM93_06635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM93_06635 PF13492 GAF domain DGM93_06640 PF01339 CheB methylesterase DGM93_06645 PF03705 CheR methyltransferase, all-alpha domain DGM93_06645 PF01739 CheR methyltransferase, SAM binding domain DGM93_06650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM93_06650 PF00512 His Kinase A (phospho-acceptor) domain DGM93_06650 PF01627 Hpt domain DGM93_06650 PF00072 Response regulator receiver domain DGM93_06650 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DGM93_06650 PF00672 HAMP domain DGM93_06655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM93_06655 PF13426 PAS domain DGM93_06655 PF00072 Response regulator receiver domain DGM93_06660 PF00072 Response regulator receiver domain DGM93_06665 PF06964 Alpha-L-arabinofuranosidase C-terminal domain DGM93_06670 PF01263 Aldose 1-epimerase DGM93_06675 PF01578 Cytochrome C assembly protein DGM93_06680 PF02881 SRP54-type protein, helical bundle domain DGM93_06680 PF02978 Signal peptide binding domain DGM93_06680 PF00448 SRP54-type protein, GTPase domain DGM93_06685 PF03060 Nitronate monooxygenase DGM93_06690 PF01063 Amino-transferase class IV DGM93_06695 PF00886 Ribosomal protein S16 DGM93_06700 PF01782 RimM N-terminal domain DGM93_06700 PF05239 PRC-barrel domain DGM93_06705 PF01746 tRNA (Guanine-1)-methyltransferase DGM93_06710 PF01245 Ribosomal protein L19 DGM93_06715 PF01554 MatE DGM93_06735 PF01479 S4 domain DGM93_06740 PF00141 Peroxidase DGM93_06755 PF01624 MutS domain I DGM93_06755 PF05192 MutS domain III DGM93_06755 PF05190 MutS family domain IV DGM93_06755 PF00488 MutS domain V DGM93_06755 PF05188 MutS domain II DGM93_06795 PF16355 Domain of unknown function (DUF4982) DGM93_06795 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 DGM93_06795 PF00703 Glycosyl hydrolases family 2 DGM93_06795 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DGM93_06795 PF02837 Glycosyl hydrolases family 2, sugar binding domain DGM93_06800 PF07745 Glycosyl hydrolase family 53 DGM93_06810 PF01381 Helix-turn-helix DGM93_06810 PF06114 IrrE N-terminal-like domain DGM93_06810 PF09856 Predicted transcriptional regulator (DUF2083) DGM93_06815 PF00171 Aldehyde dehydrogenase family DGM93_06820 PF02770 Acyl-CoA dehydrogenase, middle domain DGM93_06820 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DGM93_06820 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DGM93_06825 PF00378 Enoyl-CoA hydratase/isomerase DGM93_06830 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DGM93_06830 PF00378 Enoyl-CoA hydratase/isomerase DGM93_06830 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DGM93_06835 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DGM93_06835 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DGM93_06840 PF01545 Cation efflux family DGM93_06850 PF13181 Tetratricopeptide repeat DGM93_06860 PF13181 Tetratricopeptide repeat DGM93_06865 PF07715 TonB-dependent Receptor Plug Domain DGM93_06865 PF00593 TonB dependent receptor DGM93_06870 PF00378 Enoyl-CoA hydratase/isomerase DGM93_06870 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DGM93_06870 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DGM93_06875 PF08281 Sigma-70, region 4 DGM93_06875 PF04542 Sigma-70 region 2 DGM93_06885 PF13180 PDZ domain DGM93_06895 PF00679 Elongation factor G C-terminus DGM93_06895 PF00009 Elongation factor Tu GTP binding domain DGM93_06895 PF03144 Elongation factor Tu domain 2 DGM93_06895 PF06421 GTP-binding protein LepA C-terminus DGM93_06900 PF10502 Signal peptidase, peptidase S26 DGM93_06910 PF00035 Double-stranded RNA binding motif DGM93_06910 PF14622 Ribonuclease-III-like DGM93_06915 PF07650 KH domain DGM93_06915 PF01926 50S ribosome-binding GTPase DGM93_06920 PF02565 Recombination protein O C terminal DGM93_06920 PF11967 Recombination protein O N terminal DGM93_06930 PF05958 tRNA (Uracil-5-)-methyltransferase DGM93_06935 PF01928 CYTH domain DGM93_06940 PF01323 DSBA-like thioredoxin domain DGM93_06945 PF01593 Flavin containing amine oxidoreductase DGM93_06950 PF04244 Deoxyribodipyrimidine photo-lyase-related protein DGM93_06955 PF00933 Glycosyl hydrolase family 3 N terminal domain DGM93_06960 PF00156 Phosphoribosyl transferase domain DGM93_06965 PF01048 Phosphorylase superfamily DGM93_06970 PF00313 'Cold-shock' DNA-binding domain DGM93_06975 PF01494 FAD binding domain DGM93_06985 PF00271 Helicase conserved C-terminal domain DGM93_06985 PF00270 DEAD/DEAH box helicase DGM93_06985 PF08494 DEAD/H associated DGM93_06990 PF01068 ATP dependent DNA ligase domain DGM93_06990 PF04679 ATP dependent DNA ligase C terminal region DGM93_06990 PF04675 DNA ligase N terminus DGM93_07000 PF01068 ATP dependent DNA ligase domain DGM93_07000 PF04679 ATP dependent DNA ligase C terminal region DGM93_07000 PF04675 DNA ligase N terminus DGM93_07020 PF00072 Response regulator receiver domain DGM93_07020 PF00990 Diguanylate cyclase, GGDEF domain DGM93_07040 PF02803 Thiolase, C-terminal domain DGM93_07040 PF00108 Thiolase, N-terminal domain DGM93_07045 PF00082 Subtilase family DGM93_07045 PF03797 Autotransporter beta-domain DGM93_07045 PF12951 Passenger-associated-transport-repeat DGM93_07050 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DGM93_07050 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DGM93_07060 PF01863 Protein of unknown function DUF45 DGM93_07065 PF07043 Protein of unknown function (DUF1328) DGM93_07075 PF01258 Prokaryotic dksA/traR C4-type zinc finger DGM93_07100 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DGM93_07110 PF08274 PhnA Zinc-Ribbon DGM93_07110 PF03831 PhnA domain DGM93_07120 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DGM93_07125 PF07690 Major Facilitator Superfamily DGM93_07160 PF03706 Lysylphosphatidylglycerol synthase TM region DGM93_07160 PF09924 Uncharacterised conserved protein (DUF2156) DGM93_07170 PF01042 Endoribonuclease L-PSP DGM93_07215 PF04545 Sigma-70, region 4 DGM93_07215 PF04542 Sigma-70 region 2 DGM93_07230 PF04060 Putative Fe-S cluster DGM93_07245 PF01588 Putative tRNA binding domain DGM93_07245 PF09334 tRNA synthetases class I (M) DGM93_07265 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DGM93_07280 PF00324 Amino acid permease DGM93_07285 PF02574 Homocysteine S-methyltransferase DGM93_07295 PF02592 Putative vitamin uptake transporter DGM93_07315 PF03551 Transcriptional regulator PadR-like family DGM93_07335 PF03653 Uncharacterised protein family (UPF0093) DGM93_07350 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DGM93_07355 PF01336 OB-fold nucleic acid binding domain DGM93_07355 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DGM93_07355 PF14579 Helix-hairpin-helix motif DGM93_07355 PF02811 PHP domain DGM93_07355 PF07733 Bacterial DNA polymerase III alpha NTPase domain DGM93_07360 PF01351 Ribonuclease HII DGM93_07365 PF02684 Lipid-A-disaccharide synthetase DGM93_07370 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DGM93_07370 PF00132 Bacterial transferase hexapeptide (six repeats) DGM93_07375 PF07977 FabA-like domain DGM93_07380 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD DGM93_07380 PF00132 Bacterial transferase hexapeptide (six repeats) DGM93_07390 PF07244 Surface antigen variable number repeat DGM93_07390 PF01103 Surface antigen DGM93_07395 PF17820 PDZ domain DGM93_07395 PF02163 Peptidase family M50 DGM93_07400 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DGM93_07400 PF13288 DXP reductoisomerase C-terminal domain DGM93_07400 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DGM93_07410 PF01255 Putative undecaprenyl diphosphate synthase DGM93_07415 PF01765 Ribosome recycling factor DGM93_07420 PF00696 Amino acid kinase family DGM93_07425 PF00990 Diguanylate cyclase, GGDEF domain DGM93_07425 PF00072 Response regulator receiver domain DGM93_07430 PF00889 Elongation factor TS DGM93_07435 PF00318 Ribosomal protein S2 DGM93_07470 PF00557 Metallopeptidase family M24 DGM93_07475 PF01909 Nucleotidyltransferase domain DGM93_07475 PF01966 HD domain DGM93_07475 PF08335 GlnD PII-uridylyltransferase DGM93_07480 PF14602 Hexapeptide repeat of succinyl-transferase DGM93_07480 PF00132 Bacterial transferase hexapeptide (six repeats) DGM93_07480 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal DGM93_07485 PF03960 ArsC family DGM93_07490 PF07687 Peptidase dimerisation domain DGM93_07490 PF01546 Peptidase family M20/M25/M40 DGM93_07495 PF13537 Glutamine amidotransferase domain DGM93_07495 PF00733 Asparagine synthase DGM93_07505 PF07715 TonB-dependent Receptor Plug Domain DGM93_07505 PF00593 TonB dependent receptor DGM93_07510 PF01804 Penicillin amidase DGM93_07515 PF00210 Ferritin-like domain DGM93_07545 PF03989 DNA gyrase C-terminal domain, beta-propeller DGM93_07545 PF00521 DNA gyrase/topoisomerase IV, subunit A DGM93_07570 PF00872 Transposase, Mutator family DGM93_07600 PF02321 Outer membrane efflux protein DGM93_07605 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DGM93_07605 PF00529 HlyD membrane-fusion protein of T1SS DGM93_07610 PF07690 Major Facilitator Superfamily DGM93_07630 PF14310 Fibronectin type III-like domain DGM93_07630 PF00933 Glycosyl hydrolase family 3 N terminal domain DGM93_07630 PF01915 Glycosyl hydrolase family 3 C-terminal domain DGM93_07640 PF00854 POT family DGM93_07665 PF12802 MarR family DGM93_07670 PF01432 Peptidase family M3 DGM93_07675 PF00255 Glutathione peroxidase DGM93_07680 PF00970 Oxidoreductase FAD-binding domain DGM93_07680 PF00175 Oxidoreductase NAD-binding domain DGM93_07685 PF00005 ABC transporter DGM93_07690 PF05681 Fumarate hydratase (Fumerase) DGM93_07690 PF05683 Fumarase C-terminus DGM93_07705 PF00484 Carbonic anhydrase DGM93_07710 PF02253 Phospholipase A1 DGM93_07720 PF00313 'Cold-shock' DNA-binding domain DGM93_07735 PF00899 ThiF family DGM93_07740 PF01026 TatD related DNase DGM93_07755 PF02770 Acyl-CoA dehydrogenase, middle domain DGM93_07755 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DGM93_07755 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DGM93_07765 PF13417 Glutathione S-transferase, N-terminal domain DGM93_07775 PF13537 Glutamine amidotransferase domain DGM93_07775 PF00733 Asparagine synthase DGM93_07780 PF03358 NADPH-dependent FMN reductase DGM93_07785 PF03796 DnaB-like helicase C terminal domain DGM93_07785 PF00772 DnaB-like helicase N terminal domain DGM93_07790 PF03441 FAD binding domain of DNA photolyase DGM93_07790 PF00875 DNA photolyase DGM93_07795 PF00691 OmpA family DGM93_07795 PF05736 OprF membrane domain DGM93_07805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM93_07805 PF03466 LysR substrate binding domain DGM93_07820 PF00529 HlyD membrane-fusion protein of T1SS DGM93_07820 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DGM93_07825 PF00873 AcrB/AcrD/AcrF family DGM93_07830 PF00106 short chain dehydrogenase DGM93_07835 PF02321 Outer membrane efflux protein DGM93_07840 PF00990 Diguanylate cyclase, GGDEF domain DGM93_07850 PF00990 Diguanylate cyclase, GGDEF domain DGM93_07870 PF01668 SmpB protein DGM93_07875 PF03364 Polyketide cyclase / dehydrase and lipid transport DGM93_07880 PF03658 RnfH family Ubiquitin DGM93_07885 PF04355 SmpA / OmlA family DGM93_07890 PF01475 Ferric uptake regulator family DGM93_07895 PF02463 RecF/RecN/SMC N terminal domain DGM93_07900 PF01628 HrcA protein C terminal domain DGM93_07900 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding DGM93_07905 PF01025 GrpE DGM93_07910 PF00012 Hsp70 protein DGM93_07915 PF00684 DnaJ central domain DGM93_07915 PF00226 DnaJ domain DGM93_07915 PF01556 DnaJ C terminal domain DGM93_07920 PF08543 Phosphomethylpyrimidine kinase DGM93_07945 PF00664 ABC transporter transmembrane region DGM93_07945 PF00005 ABC transporter DGM93_07945 PF03412 Peptidase C39 family DGM93_07950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM93_07950 PF03466 LysR substrate binding domain DGM93_07960 PF00664 ABC transporter transmembrane region DGM93_07960 PF00005 ABC transporter DGM93_07965 PF01205 Uncharacterized protein family UPF0029 DGM93_07970 PF03641 Possible lysine decarboxylase DGM93_07975 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DGM93_07975 PF07992 Pyridine nucleotide-disulphide oxidoreductase DGM93_07980 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DGM93_07980 PF00364 Biotin-requiring enzyme DGM93_07980 PF02817 e3 binding domain DGM93_07985 PF00676 Dehydrogenase E1 component DGM93_07985 PF16870 2-oxoglutarate dehydrogenase C-terminal DGM93_07985 PF02779 Transketolase, pyrimidine binding domain DGM93_07985 PF16078 2-oxoglutarate dehydrogenase N-terminus DGM93_07995 PF08007 Cupin superfamily protein DGM93_08005 PF08328 Adenylosuccinate lyase C-terminal DGM93_08005 PF00206 Lyase DGM93_08015 PF01595 Cyclin M transmembrane N-terminal domain DGM93_08015 PF03471 Transporter associated domain DGM93_08015 PF00571 CBS domain DGM93_08020 PF10415 Fumarase C C-terminus DGM93_08020 PF00206 Lyase DGM93_08050 PF00005 ABC transporter DGM93_08055 PF00392 Bacterial regulatory proteins, gntR family DGM93_08065 PF00255 Glutathione peroxidase DGM93_08070 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DGM93_08070 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DGM93_08085 PF04102 SlyX DGM93_08105 PF00356 Bacterial regulatory proteins, lacI family DGM93_08110 PF07690 Major Facilitator Superfamily DGM93_08115 PF00294 pfkB family carbohydrate kinase DGM93_08125 PF02310 B12 binding domain DGM93_08125 PF02607 B12 binding domain DGM93_08125 PF02965 Vitamin B12 dependent methionine synthase, activation domain DGM93_08125 PF00809 Pterin binding enzyme DGM93_08125 PF02574 Homocysteine S-methyltransferase DGM93_08130 PF00809 Pterin binding enzyme DGM93_08130 PF02574 Homocysteine S-methyltransferase DGM93_08135 PF01209 ubiE/COQ5 methyltransferase family DGM93_08140 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DGM93_08140 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DGM93_08140 PF02770 Acyl-CoA dehydrogenase, middle domain DGM93_08145 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DGM93_08145 PF02770 Acyl-CoA dehydrogenase, middle domain DGM93_08145 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DGM93_08160 PF17876 Cold shock domain DGM93_08160 PF08461 Ribonuclease R winged-helix domain DGM93_08160 PF08206 Ribonuclease B OB domain DGM93_08160 PF00773 RNB domain DGM93_08160 PF00575 S1 RNA binding domain DGM93_08170 PF00588 SpoU rRNA Methylase family DGM93_08170 PF08032 RNA 2'-O ribose methyltransferase substrate binding DGM93_08185 PF00929 Exonuclease DGM93_08195 PF01895 PhoU domain DGM93_08200 PF00005 ABC transporter DGM93_08205 PF00528 Binding-protein-dependent transport system inner membrane component DGM93_08210 PF00528 Binding-protein-dependent transport system inner membrane component DGM93_08215 PF12849 PBP superfamily domain DGM93_08220 PF12849 PBP superfamily domain DGM93_08235 PF00484 Carbonic anhydrase DGM93_08240 PF00916 Sulfate permease family DGM93_08240 PF01740 STAS domain DGM93_08245 PF00730 HhH-GPD superfamily base excision DNA repair protein DGM93_08245 PF00633 Helix-hairpin-helix motif DGM93_08245 PF10576 Iron-sulfur binding domain of endonuclease III DGM93_08255 PF00378 Enoyl-CoA hydratase/isomerase DGM93_08260 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DGM93_08260 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DGM93_08265 PF00293 NUDIX domain DGM93_08270 PF00581 Rhodanese-like domain DGM93_08300 PF12848 ABC transporter DGM93_08300 PF00005 ABC transporter DGM93_08300 PF16326 ABC transporter C-terminal domain DGM93_08310 PF01170 Putative RNA methylase family UPF0020 DGM93_08310 PF02926 THUMP domain DGM93_08310 PF10672 S-adenosylmethionine-dependent methyltransferase DGM93_08315 PF01513 ATP-NAD kinase DGM93_08335 PF00929 Exonuclease DGM93_08335 PF08411 Exonuclease C-terminal DGM93_08345 PF01494 FAD binding domain DGM93_08350 PF00266 Aminotransferase class-V DGM93_08360 PF06052 3-hydroxyanthranilic acid dioxygenase DGM93_08365 PF00484 Carbonic anhydrase DGM93_08410 PF00072 Response regulator receiver domain DGM93_08410 PF00196 Bacterial regulatory proteins, luxR family DGM93_08445 PF01336 OB-fold nucleic acid binding domain DGM93_08445 PF00152 tRNA synthetases class II (D, K and N) DGM93_08455 PF01521 Iron-sulphur cluster biosynthesis DGM93_08460 PF01250 Ribosomal protein S6 DGM93_08465 PF01084 Ribosomal protein S18 DGM93_08470 PF03948 Ribosomal protein L9, C-terminal domain DGM93_08470 PF01281 Ribosomal protein L9, N-terminal domain DGM93_08475 PF02463 RecF/RecN/SMC N terminal domain DGM93_08480 PF04354 ZipA, C-terminal FtsZ-binding domain DGM93_08490 PF00155 Aminotransferase class I and II DGM93_08495 PF12826 Helix-hairpin-helix motif DGM93_08495 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DGM93_08495 PF01653 NAD-dependent DNA ligase adenylation domain DGM93_08495 PF03120 NAD-dependent DNA ligase OB-fold domain DGM93_08495 PF00533 BRCA1 C Terminus (BRCT) domain DGM93_08500 PF00152 tRNA synthetases class II (D, K and N) DGM93_08515 PF01008 Initiation factor 2 subunit family DGM93_08520 PF00521 DNA gyrase/topoisomerase IV, subunit A DGM93_08520 PF03989 DNA gyrase C-terminal domain, beta-propeller DGM93_08525 PF13360 PQQ-like domain DGM93_08535 PF17391 Urocanase N-terminal domain DGM93_08535 PF17392 Urocanase C-terminal domain DGM93_08535 PF01175 Urocanase Rossmann-like domain DGM93_08550 PF00221 Aromatic amino acid lyase DGM93_08555 PF07969 Amidohydrolase family DGM93_08570 PF00392 Bacterial regulatory proteins, gntR family DGM93_08570 PF07702 UTRA domain DGM93_08595 PF01794 Ferric reductase like transmembrane component DGM93_08600 PF00174 Oxidoreductase molybdopterin binding domain DGM93_08605 PF00266 Aminotransferase class-V DGM93_08610 PF01842 ACT domain DGM93_08610 PF01817 Chorismate mutase type II DGM93_08610 PF00800 Prephenate dehydratase DGM93_08615 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DGM93_08625 PF03544 Gram-negative bacterial TonB protein C-terminal DGM93_08630 PF02403 Seryl-tRNA synthetase N-terminal domain DGM93_08630 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DGM93_08635 PF02525 Flavodoxin-like fold DGM93_08640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM93_08640 PF03466 LysR substrate binding domain DGM93_08665 PF00872 Transposase, Mutator family DGM93_08680 PF00672 HAMP domain DGM93_08680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGM93_08680 PF02203 Tar ligand binding domain homologue DGM93_08685 PF01494 FAD binding domain DGM93_08700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM93_08700 PF00072 Response regulator receiver domain DGM93_08700 PF13426 PAS domain DGM93_08710 PF06745 KaiC DGM93_08715 PF08448 PAS fold DGM93_08715 PF13188 PAS domain DGM93_08715 PF00072 Response regulator receiver domain DGM93_08715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM93_08715 PF00512 His Kinase A (phospho-acceptor) domain DGM93_08725 PF03918 Cytochrome C biogenesis protein DGM93_08730 PF08534 Redoxin DGM93_08735 PF01578 Cytochrome C assembly protein DGM93_08735 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal DGM93_08740 PF03100 CcmE DGM93_08745 PF04995 Heme exporter protein D (CcmD) DGM93_08750 PF01578 Cytochrome C assembly protein DGM93_08755 PF00082 Subtilase family DGM93_08765 PF04542 Sigma-70 region 2 DGM93_08765 PF08281 Sigma-70, region 4 DGM93_08780 PF00034 Cytochrome c DGM93_08795 PF05523 WxcM-like, C-terminal DGM93_08815 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DGM93_08820 PF01943 Polysaccharide biosynthesis protein DGM93_08825 PF00535 Glycosyl transferase family 2 DGM93_08840 PF08241 Methyltransferase domain DGM93_08860 PF00534 Glycosyl transferases group 1 DGM93_08860 PF13579 Glycosyl transferase 4-like domain DGM93_08875 PF00005 ABC transporter DGM93_08880 PF00005 ABC transporter DGM93_08880 PF00664 ABC transporter transmembrane region DGM93_08885 PF07690 Major Facilitator Superfamily DGM93_08890 PF00296 Luciferase-like monooxygenase DGM93_08905 PF01595 Cyclin M transmembrane N-terminal domain DGM93_08905 PF00571 CBS domain DGM93_08905 PF03471 Transporter associated domain DGM93_08920 PF01384 Phosphate transporter family DGM93_08935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM93_08935 PF00986 DNA gyrase B subunit, carboxyl terminus DGM93_08935 PF00204 DNA gyrase B DGM93_08935 PF01751 Toprim domain DGM93_08945 PF06418 CTP synthase N-terminus DGM93_08945 PF00117 Glutamine amidotransferase class-I DGM93_08950 PF00793 DAHP synthetase I family DGM93_08960 PF00113 Enolase, C-terminal TIM barrel domain DGM93_08960 PF03952 Enolase, N-terminal domain DGM93_08965 PF04977 Septum formation initiator DGM93_08970 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DGM93_08975 PF02542 YgbB family DGM93_08980 PF01142 tRNA pseudouridine synthase D (TruD) DGM93_08985 PF01713 Smr domain DGM93_08990 PF01975 Survival protein SurE DGM93_09000 PF09335 SNARE associated Golgi protein DGM93_09005 PF01476 LysM domain DGM93_09005 PF01551 Peptidase family M23 DGM93_09010 PF04430 Protein of unknown function (DUF498/DUF598) DGM93_09015 PF01985 CRS1 / YhbY (CRM) domain DGM93_09020 PF01728 FtsJ-like methyltransferase DGM93_09025 PF00004 ATPase family associated with various cellular activities (AAA) DGM93_09025 PF17862 AAA+ lid domain DGM93_09025 PF06480 FtsH Extracellular DGM93_09025 PF01434 Peptidase family M41 DGM93_09030 PF00809 Pterin binding enzyme DGM93_09040 PF17209 Hfq protein DGM93_09045 PF16360 GTP-binding GTPase Middle Region DGM93_09045 PF13167 GTP-binding GTPase N-terminal DGM93_09045 PF01926 50S ribosome-binding GTPase DGM93_09050 PF02464 Competence-damaged protein DGM93_09055 PF03109 ABC1 family DGM93_09060 PF01726 LexA DNA binding domain DGM93_09060 PF00717 Peptidase S24-like DGM93_09065 PF00154 recA bacterial DNA recombination protein DGM93_09075 PF02631 RecX family DGM93_09080 PF02272 DHHA1 domain DGM93_09080 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DGM93_09080 PF01411 tRNA synthetases class II (A) DGM93_09085 PF02599 Global regulator protein family DGM93_09095 PF08447 PAS fold DGM93_09095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGM93_09095 PF13426 PAS domain DGM93_09105 PF03466 LysR substrate binding domain DGM93_09105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM93_09130 PF08543 Phosphomethylpyrimidine kinase DGM93_09145 PF13638 PIN domain DGM93_09145 PF02562 PhoH-like protein DGM93_09150 PF00578 AhpC/TSA family DGM93_09165 PF00701 Dihydrodipicolinate synthetase family DGM93_09175 PF00037 4Fe-4S binding domain DGM93_09175 PF11953 Domain of unknown function (DUF3470) DGM93_09180 PF05035 2-keto-3-deoxy-galactonokinase DGM93_09185 PF08450 SMP-30/Gluconolactonase/LRE-like region DGM93_09190 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DGM93_09190 PF13378 Enolase C-terminal domain-like DGM93_09195 PF01081 KDPG and KHG aldolase DGM93_09205 PF03466 LysR substrate binding domain DGM93_09205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM93_09220 PF03442 Carbohydrate binding domain X2 DGM93_09220 PF00942 Cellulose binding domain DGM93_09235 PF17137 Domain of unknown function (DUF5110) DGM93_09235 PF16338 Domain of unknown function (DUF4968) DGM93_09235 PF01055 Glycosyl hydrolases family 31 DGM93_09245 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DGM93_09245 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DGM93_09255 PF00083 Sugar (and other) transporter DGM93_09285 PF01520 N-acetylmuramoyl-L-alanine amidase DGM93_09295 PF01609 Transposase DDE domain DGM93_09295 PF05598 Transposase domain (DUF772) DGM93_09315 PF01743 Poly A polymerase head domain DGM93_09315 PF12626 Polymerase A arginine-rich C-terminus DGM93_09315 PF12627 Probable RNA and SrmB- binding site of polymerase A DGM93_09320 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DGM93_09325 PF02548 Ketopantoate hydroxymethyltransferase DGM93_09330 PF02569 Pantoate-beta-alanine ligase DGM93_09335 PF02261 Aspartate decarboxylase DGM93_09340 PF00342 Phosphoglucose isomerase DGM93_09360 PF01915 Glycosyl hydrolase family 3 C-terminal domain DGM93_09360 PF00933 Glycosyl hydrolase family 3 N terminal domain DGM93_09360 PF14310 Fibronectin type III-like domain DGM93_09370 PF00474 Sodium:solute symporter family DGM93_09375 PF00563 EAL domain DGM93_09375 PF01590 GAF domain DGM93_09375 PF00990 Diguanylate cyclase, GGDEF domain DGM93_09375 PF00360 Phytochrome region DGM93_09380 PF00150 Cellulase (glycosyl hydrolase family 5) DGM93_09380 PF02013 Cellulose or protein binding domain DGM93_09385 PF00072 Response regulator receiver domain DGM93_09400 PF04551 GcpE protein DGM93_09405 PF01569 PAP2 superfamily DGM93_09410 PF08946 Osmosensory transporter coiled coil DGM93_09410 PF00083 Sugar (and other) transporter DGM93_09415 PF01177 Asp/Glu/Hydantoin racemase DGM93_09425 PF00892 EamA-like transporter family DGM93_09430 PF01565 FAD binding domain DGM93_09430 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DGM93_09435 PF01180 Dihydroorotate dehydrogenase DGM93_09455 PF00171 Aldehyde dehydrogenase family DGM93_09470 PF00872 Transposase, Mutator family DGM93_09480 PF00128 Alpha amylase, catalytic domain DGM93_09500 PF10566 Glycoside hydrolase 97 DGM93_09500 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation DGM93_09500 PF14508 Glycosyl-hydrolase 97 N-terminal DGM93_09515 PF00686 Starch binding domain DGM93_09515 PF00128 Alpha amylase, catalytic domain DGM93_09520 PF00356 Bacterial regulatory proteins, lacI family DGM93_09525 PF03129 Anticodon binding domain DGM93_09525 PF02824 TGS domain DGM93_09525 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DGM93_09525 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DGM93_09530 PF05198 Translation initiation factor IF-3, N-terminal domain DGM93_09530 PF00707 Translation initiation factor IF-3, C-terminal domain DGM93_09535 PF01632 Ribosomal protein L35 DGM93_09540 PF00453 Ribosomal protein L20 DGM93_09545 PF01409 tRNA synthetases class II core domain (F) DGM93_09545 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DGM93_09550 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DGM93_09550 PF03484 tRNA synthetase B5 domain DGM93_09550 PF03483 B3/4 domain DGM93_09550 PF01588 Putative tRNA binding domain DGM93_09550 PF03147 Ferredoxin-fold anticodon binding domain DGM93_09555 PF00216 Bacterial DNA-binding protein DGM93_09560 PF13411 MerR HTH family regulatory protein DGM93_09580 PF02397 Bacterial sugar transferase DGM93_09600 PF00534 Glycosyl transferases group 1 DGM93_09600 PF13439 Glycosyltransferase Family 4 DGM93_09610 PF14667 Polysaccharide biosynthesis C-terminal domain DGM93_09625 PF03808 Glycosyl transferase WecB/TagA/CpsF family DGM93_09640 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DGM93_09640 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DGM93_09650 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family DGM93_09670 PF02780 Transketolase, C-terminal domain DGM93_09670 PF02779 Transketolase, pyrimidine binding domain DGM93_09670 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DGM93_09680 PF12806 Acetyl-CoA dehydrogenase C-terminal like DGM93_09680 PF02770 Acyl-CoA dehydrogenase, middle domain DGM93_09680 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DGM93_09680 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DGM93_09690 PF08212 Lipocalin-like domain DGM93_09720 PF00072 Response regulator receiver domain DGM93_09720 PF13426 PAS domain DGM93_09720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM93_09735 PF04362 Bacterial Fe(2+) trafficking DGM93_09740 PF14815 NUDIX domain DGM93_09740 PF00633 Helix-hairpin-helix motif DGM93_09740 PF10576 Iron-sulfur binding domain of endonuclease III DGM93_09740 PF00730 HhH-GPD superfamily base excision DNA repair protein DGM93_09750 PF00448 SRP54-type protein, GTPase domain DGM93_09750 PF02881 SRP54-type protein, helical bundle domain DGM93_09760 PF05544 Proline racemase DGM93_09765 PF01266 FAD dependent oxidoreductase DGM93_09775 PF07992 Pyridine nucleotide-disulphide oxidoreductase DGM93_09775 PF04324 BFD-like [2Fe-2S] binding domain DGM93_09780 PF00701 Dihydrodipicolinate synthetase family DGM93_09785 PF00171 Aldehyde dehydrogenase family DGM93_09790 PF01321 Creatinase/Prolidase N-terminal domain DGM93_09790 PF00557 Metallopeptidase family M24 DGM93_09810 PF13520 Amino acid permease DGM93_09840 PF09286 Pro-kumamolisin, activation domain DGM93_09840 PF00082 Subtilase family DGM93_09855 PF00593 TonB dependent receptor DGM93_09855 PF07715 TonB-dependent Receptor Plug Domain DGM93_09870 PF07532 Bacterial Ig-like domain (group 4) DGM93_09880 PF07715 TonB-dependent Receptor Plug Domain DGM93_09880 PF00593 TonB dependent receptor DGM93_09930 PF00872 Transposase, Mutator family DGM93_09955 PF08479 POTRA domain, ShlB-type DGM93_09955 PF17287 POTRA domain DGM93_09955 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB DGM93_09995 PF03073 TspO/MBR family DGM93_10000 PF00872 Transposase, Mutator family DGM93_10005 PF03447 Homoserine dehydrogenase, NAD binding domain DGM93_10005 PF13840 ACT domain DGM93_10005 PF01842 ACT domain DGM93_10005 PF00696 Amino acid kinase family DGM93_10005 PF00742 Homoserine dehydrogenase DGM93_10010 PF08544 GHMP kinases C terminal DGM93_10010 PF00288 GHMP kinases N terminal domain DGM93_10020 PF07519 Tannase and feruloyl esterase DGM93_10030 PF00291 Pyridoxal-phosphate dependent enzyme DGM93_10030 PF14821 Threonine synthase N terminus DGM93_10040 PF00027 Cyclic nucleotide-binding domain DGM93_10040 PF13545 Crp-like helix-turn-helix domain DGM93_10045 PF03129 Anticodon binding domain DGM93_10045 PF13393 Histidyl-tRNA synthetase DGM93_10055 PF08029 HisG, C-terminal domain DGM93_10055 PF01634 ATP phosphoribosyltransferase DGM93_10060 PF00815 Histidinol dehydrogenase DGM93_10065 PF00155 Aminotransferase class I and II DGM93_10070 PF00475 Imidazoleglycerol-phosphate dehydratase DGM93_10075 PF00117 Glutamine amidotransferase class-I DGM93_10080 PF00977 Histidine biosynthesis protein DGM93_10085 PF00977 Histidine biosynthesis protein DGM93_10090 PF01502 Phosphoribosyl-AMP cyclohydrolase DGM93_10090 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DGM93_10115 PF00596 Class II Aldolase and Adducin N-terminal domain DGM93_10120 PF13520 Amino acid permease DGM93_10125 PF13520 Amino acid permease DGM93_10135 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DGM93_10135 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DGM93_10140 PF02913 FAD linked oxidases, C-terminal domain DGM93_10140 PF01565 FAD binding domain DGM93_10160 PF08207 Elongation factor P (EF-P) KOW-like domain DGM93_10160 PF09285 Elongation factor P, C-terminal DGM93_10160 PF01132 Elongation factor P (EF-P) OB domain DGM93_10165 PF00106 short chain dehydrogenase DGM93_10170 PF00682 HMGL-like DGM93_10180 PF00378 Enoyl-CoA hydratase/isomerase DGM93_10190 PF07670 Nucleoside recognition DGM93_10190 PF07664 Ferrous iron transport protein B C terminus DGM93_10190 PF02421 Ferrous iron transport protein B DGM93_10205 PF00155 Aminotransferase class I and II DGM93_10210 PF03475 3-alpha domain DGM93_10210 PF03473 MOSC domain DGM93_10215 PF05173 Dihydrodipicolinate reductase, C-terminus DGM93_10215 PF01113 Dihydrodipicolinate reductase, N-terminus DGM93_10220 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DGM93_10220 PF00117 Glutamine amidotransferase class-I DGM93_10230 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DGM93_10230 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DGM93_10230 PF02142 MGS-like domain DGM93_10235 PF01272 Transcription elongation factor, GreA/GreB, C-term DGM93_10235 PF03449 Transcription elongation factor, N-terminal DGM93_10245 PF01368 DHH family DGM93_10245 PF02272 DHHA1 domain DGM93_10245 PF17768 RecJ OB domain DGM93_10265 PF00152 tRNA synthetases class II (D, K and N) DGM93_10265 PF01336 OB-fold nucleic acid binding domain DGM93_10270 PF00072 Response regulator receiver domain DGM93_10275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM93_10275 PF00072 Response regulator receiver domain DGM93_10275 PF01627 Hpt domain DGM93_10275 PF00512 His Kinase A (phospho-acceptor) domain DGM93_10280 PF00512 His Kinase A (phospho-acceptor) domain DGM93_10280 PF00072 Response regulator receiver domain DGM93_10280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM93_10280 PF01627 Hpt domain DGM93_10285 PF00378 Enoyl-CoA hydratase/isomerase DGM93_10290 PF00501 AMP-binding enzyme DGM93_10290 PF13193 AMP-binding enzyme C-terminal domain DGM93_10305 PF00330 Aconitase family (aconitate hydratase) DGM93_10305 PF00694 Aconitase C-terminal domain DGM93_10320 PF00330 Aconitase family (aconitate hydratase) DGM93_10320 PF06434 Aconitate hydratase 2 N-terminus DGM93_10320 PF11791 Aconitate B N-terminal domain DGM93_10325 PF00561 alpha/beta hydrolase fold DGM93_10330 PF03707 Bacterial signalling protein N terminal repeat DGM93_10330 PF00563 EAL domain DGM93_10330 PF00990 Diguanylate cyclase, GGDEF domain DGM93_10335 PF01339 CheB methylesterase DGM93_10335 PF00072 Response regulator receiver domain DGM93_10340 PF03975 CheD chemotactic sensory transduction DGM93_10345 PF01739 CheR methyltransferase, SAM binding domain DGM93_10345 PF03705 CheR methyltransferase, all-alpha domain DGM93_10350 PF02203 Tar ligand binding domain homologue DGM93_10350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGM93_10350 PF00672 HAMP domain DGM93_10360 PF01584 CheW-like domain DGM93_10365 PF07317 Flagellar regulator YcgR DGM93_10365 PF07238 PilZ domain DGM93_10375 PF00672 HAMP domain DGM93_10375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGM93_10375 PF02203 Tar ligand binding domain homologue DGM93_10380 PF00672 HAMP domain DGM93_10380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGM93_10380 PF02203 Tar ligand binding domain homologue DGM93_10385 PF02203 Tar ligand binding domain homologue DGM93_10385 PF00672 HAMP domain DGM93_10385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGM93_10390 PF02203 Tar ligand binding domain homologue DGM93_10390 PF00672 HAMP domain DGM93_10390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGM93_10395 PF00672 HAMP domain DGM93_10395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGM93_10395 PF02203 Tar ligand binding domain homologue DGM93_10410 PF00672 HAMP domain DGM93_10410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGM93_10410 PF02203 Tar ligand binding domain homologue DGM93_10415 PF00672 HAMP domain DGM93_10415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGM93_10415 PF02203 Tar ligand binding domain homologue DGM93_10420 PF00672 HAMP domain DGM93_10420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGM93_10425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGM93_10425 PF02203 Tar ligand binding domain homologue DGM93_10425 PF00672 HAMP domain DGM93_10440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGM93_10440 PF02203 Tar ligand binding domain homologue DGM93_10440 PF00672 HAMP domain DGM93_10445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGM93_10445 PF08269 Cache domain DGM93_10445 PF08269 Cache domain DGM93_10445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGM93_10455 PF02203 Tar ligand binding domain homologue DGM93_10455 PF00672 HAMP domain DGM93_10455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGM93_10460 PF02203 Tar ligand binding domain homologue DGM93_10460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGM93_10460 PF00672 HAMP domain DGM93_10465 PF01584 CheW-like domain DGM93_10465 PF09078 CheY binding DGM93_10465 PF02895 Signal transducing histidine kinase, homodimeric domain DGM93_10465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM93_10465 PF01627 Hpt domain DGM93_10470 PF00072 Response regulator receiver domain DGM93_10480 PF01584 CheW-like domain DGM93_10485 PF13614 AAA domain DGM93_10490 PF00691 OmpA family DGM93_10490 PF13677 Membrane MotB of proton-channel complex MotA/MotB DGM93_10495 PF01618 MotA/TolQ/ExbB proton channel family DGM93_10535 PF00072 Response regulator receiver domain DGM93_10535 PF01584 CheW-like domain DGM93_10535 PF02895 Signal transducing histidine kinase, homodimeric domain DGM93_10535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM93_10535 PF01627 Hpt domain DGM93_10540 PF04344 Chemotaxis phosphatase, CheZ DGM93_10545 PF00072 Response regulator receiver domain DGM93_10550 PF04542 Sigma-70 region 2 DGM93_10550 PF04539 Sigma-70 region 3 DGM93_10550 PF04545 Sigma-70, region 4 DGM93_10555 PF10609 NUBPL iron-transfer P-loop NTPase DGM93_10560 PF00448 SRP54-type protein, GTPase domain DGM93_10565 PF00771 FHIPEP family DGM93_10570 PF01312 FlhB HrpN YscU SpaS Family DGM93_10580 PF00563 EAL domain DGM93_10580 PF03707 Bacterial signalling protein N terminal repeat DGM93_10580 PF00990 Diguanylate cyclase, GGDEF domain DGM93_10590 PF05598 Transposase domain (DUF772) DGM93_10590 PF01609 Transposase DDE domain DGM93_10600 PF01311 Bacterial export proteins, family 1 DGM93_10605 PF01313 Bacterial export proteins, family 3 DGM93_10610 PF00813 FliP family DGM93_10615 PF04347 Flagellar biosynthesis protein, FliO DGM93_10620 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DGM93_10625 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DGM93_10625 PF02154 Flagellar motor switch protein FliM DGM93_10645 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DGM93_10645 PF18269 T3SS EscN ATPase C-terminal domain DGM93_10655 PF01706 FliG C-terminal domain DGM93_10655 PF14841 FliG middle domain DGM93_10655 PF14842 FliG N-terminal domain DGM93_10660 PF01514 Secretory protein of YscJ/FliF family DGM93_10660 PF08345 Flagellar M-ring protein C-terminal DGM93_10665 PF02049 Flagellar hook-basal body complex protein FliE DGM93_10670 PF00534 Glycosyl transferases group 1 DGM93_10670 PF00535 Glycosyl transferase family 2 DGM93_10700 PF02348 Cytidylyltransferase DGM93_10735 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DGM93_10735 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DGM93_10745 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DGM93_10750 PF06490 Flagellar regulatory protein FleQ DGM93_10750 PF02954 Bacterial regulatory protein, Fis family DGM93_10750 PF00158 Sigma-54 interaction domain DGM93_10755 PF00072 Response regulator receiver domain DGM93_10755 PF01339 CheB methylesterase DGM93_10760 PF00309 Sigma-54 factor, Activator interacting domain (AID) DGM93_10760 PF04963 Sigma-54 factor, core binding domain DGM93_10760 PF04552 Sigma-54, DNA binding domain DGM93_10765 PF00196 Bacterial regulatory proteins, luxR family DGM93_10765 PF00072 Response regulator receiver domain DGM93_10780 PF02561 Flagellar protein FliS DGM93_10785 PF07196 Flagellin hook IN motif DGM93_10785 PF07195 Flagellar hook-associated protein 2 C-terminus DGM93_10785 PF02465 Flagellar hook-associated protein 2 N-terminus DGM93_10790 PF00700 Bacterial flagellin C-terminal helical region DGM93_10790 PF00669 Bacterial flagellin N-terminal helical region DGM93_10795 PF05598 Transposase domain (DUF772) DGM93_10795 PF01609 Transposase DDE domain DGM93_10800 PF00700 Bacterial flagellin C-terminal helical region DGM93_10800 PF00669 Bacterial flagellin N-terminal helical region DGM93_10805 PF07196 Flagellin hook IN motif DGM93_10805 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DGM93_10810 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DGM93_10810 PF10135 Rod binding protein DGM93_10815 PF02119 Flagellar P-ring protein DGM93_10820 PF02107 Flagellar L-ring protein DGM93_10825 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DGM93_10825 PF00460 Flagella basal body rod protein DGM93_10830 PF00460 Flagella basal body rod protein DGM93_10830 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DGM93_10835 PF07559 Flagellar basal body protein FlaE DGM93_10835 PF00460 Flagella basal body rod protein DGM93_10835 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DGM93_10840 PF03963 Flagellar hook capping protein - N-terminal region DGM93_10845 PF00460 Flagella basal body rod protein DGM93_10845 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DGM93_10855 PF01584 CheW-like domain DGM93_10855 PF00072 Response regulator receiver domain DGM93_10875 PF13426 PAS domain DGM93_10875 PF13188 PAS domain DGM93_10875 PF00989 PAS fold DGM93_10875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM93_10875 PF00512 His Kinase A (phospho-acceptor) domain DGM93_10880 PF00563 EAL domain DGM93_10880 PF00990 Diguanylate cyclase, GGDEF domain DGM93_10880 PF03707 Bacterial signalling protein N terminal repeat DGM93_10885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM93_10885 PF07730 Histidine kinase DGM93_10890 PF00990 Diguanylate cyclase, GGDEF domain DGM93_10890 PF03707 Bacterial signalling protein N terminal repeat DGM93_10890 PF00563 EAL domain DGM93_10900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGM93_10900 PF12729 Four helix bundle sensory module for signal transduction DGM93_10900 PF00672 HAMP domain DGM93_10905 PF04356 Protein of unknown function (DUF489) DGM93_10915 PF00293 NUDIX domain DGM93_10920 PF02617 ATP-dependent Clp protease adaptor protein ClpS DGM93_10925 PF17871 AAA lid domain DGM93_10925 PF00004 ATPase family associated with various cellular activities (AAA) DGM93_10925 PF07724 AAA domain (Cdc48 subfamily) DGM93_10925 PF02861 Clp amino terminal domain, pathogenicity island component DGM93_10925 PF10431 C-terminal, D2-small domain, of ClpB protein DGM93_10930 PF01176 Translation initiation factor 1A / IF-1 DGM93_10935 PF03588 Leucyl/phenylalanyl-tRNA protein transferase DGM93_10945 PF07992 Pyridine nucleotide-disulphide oxidoreductase DGM93_10950 PF17854 FtsK alpha domain DGM93_10950 PF09397 Ftsk gamma domain DGM93_10950 PF01580 FtsK/SpoIIIE family DGM93_10950 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DGM93_10960 PF03548 Outer membrane lipoprotein carrier protein LolA DGM93_10975 PF12002 MgsA AAA+ ATPase C terminal DGM93_10975 PF00004 ATPase family associated with various cellular activities (AAA) DGM93_10975 PF16193 AAA C-terminal domain DGM93_10980 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DGM93_10985 PF02803 Thiolase, C-terminal domain DGM93_10985 PF00108 Thiolase, N-terminal domain DGM93_10990 PF00378 Enoyl-CoA hydratase/isomerase DGM93_10990 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DGM93_10990 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DGM93_11000 PF00334 Nucleoside diphosphate kinase DGM93_11005 PF04055 Radical SAM superfamily DGM93_11015 PF13464 Domain of unknown function (DUF4115) DGM93_11025 PF01011 PQQ enzyme repeat DGM93_11025 PF13360 PQQ-like domain DGM93_11030 PF01926 50S ribosome-binding GTPase DGM93_11030 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DGM93_11035 PF03454 MoeA C-terminal region (domain IV) DGM93_11035 PF03453 MoeA N-terminal region (domain I and II) DGM93_11035 PF00994 Probable molybdopterin binding domain DGM93_11040 PF00899 ThiF family DGM93_11070 PF13823 Alcohol dehydrogenase GroES-associated DGM93_11070 PF08240 Alcohol dehydrogenase GroES-like domain DGM93_11070 PF00107 Zinc-binding dehydrogenase DGM93_11080 PF03372 Endonuclease/Exonuclease/phosphatase family DGM93_11090 PF00994 Probable molybdopterin binding domain DGM93_11090 PF03454 MoeA C-terminal region (domain IV) DGM93_11090 PF03453 MoeA N-terminal region (domain I and II) DGM93_11095 PF12804 MobA-like NTP transferase domain DGM93_11120 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DGM93_11120 PF14824 Sirohaem biosynthesis protein central DGM93_11120 PF10414 Sirohaem synthase dimerisation region DGM93_11125 PF00072 Response regulator receiver domain DGM93_11125 PF03861 ANTAR domain DGM93_11140 PF07690 Major Facilitator Superfamily DGM93_11145 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DGM93_11145 PF18267 Rubredoxin NAD+ reductase C-terminal domain DGM93_11145 PF07992 Pyridine nucleotide-disulphide oxidoreductase DGM93_11145 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DGM93_11145 PF04324 BFD-like [2Fe-2S] binding domain DGM93_11155 PF00384 Molybdopterin oxidoreductase DGM93_11155 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DGM93_11155 PF04324 BFD-like [2Fe-2S] binding domain DGM93_11155 PF01568 Molydopterin dinucleotide binding domain DGM93_11160 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DGM93_11170 PF05974 Domain of unknown function (DUF892) DGM93_11190 PF00563 EAL domain DGM93_11190 PF00990 Diguanylate cyclase, GGDEF domain DGM93_11190 PF08447 PAS fold DGM93_11190 PF08448 PAS fold DGM93_11195 PF12951 Passenger-associated-transport-repeat DGM93_11195 PF12951 Passenger-associated-transport-repeat DGM93_11200 PF00196 Bacterial regulatory proteins, luxR family DGM93_11200 PF00072 Response regulator receiver domain DGM93_11205 PF13426 PAS domain DGM93_11205 PF08448 PAS fold DGM93_11205 PF00512 His Kinase A (phospho-acceptor) domain DGM93_11205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM93_11205 PF00072 Response regulator receiver domain DGM93_11215 PF00873 AcrB/AcrD/AcrF family DGM93_11220 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DGM93_11230 PF00082 Subtilase family DGM93_11230 PF03797 Autotransporter beta-domain DGM93_11245 PF07995 Glucose / Sorbosone dehydrogenase DGM93_11255 PF00872 Transposase, Mutator family DGM93_11265 PF05598 Transposase domain (DUF772) DGM93_11265 PF01609 Transposase DDE domain DGM93_11270 PF00872 Transposase, Mutator family DGM93_11345 PF00872 Transposase, Mutator family DGM93_11355 PF08241 Methyltransferase domain DGM93_11355 PF12697 Alpha/beta hydrolase family DGM93_11370 PF02585 GlcNAc-PI de-N-acetylase DGM93_11370 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DGM93_11380 PF00872 Transposase, Mutator family DGM93_11405 PF00440 Bacterial regulatory proteins, tetR family DGM93_11415 PF01106 NifU-like domain DGM93_11420 PF01329 Pterin 4 alpha carbinolamine dehydratase DGM93_11430 PF02535 ZIP Zinc transporter DGM93_11435 PF11737 Protein of unknown function (DUF3300) DGM93_11440 PF00849 RNA pseudouridylate synthase DGM93_11440 PF01479 S4 domain DGM93_11445 PF12111 Polyribonucleotide phosphorylase C terminal DGM93_11445 PF10150 Ribonuclease E/G family DGM93_11445 PF00575 S1 RNA binding domain DGM93_11450 PF05598 Transposase domain (DUF772) DGM93_11450 PF01609 Transposase DDE domain DGM93_11455 PF00072 Response regulator receiver domain DGM93_11455 PF00196 Bacterial regulatory proteins, luxR family DGM93_11460 PF17773 UPF0176 acylphosphatase like domain DGM93_11460 PF00581 Rhodanese-like domain DGM93_11470 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DGM93_11480 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DGM93_11480 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DGM93_11480 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DGM93_11505 PF01066 CDP-alcohol phosphatidyltransferase DGM93_11510 PF01541 GIY-YIG catalytic domain DGM93_11510 PF02151 UvrB/uvrC motif DGM93_11510 PF08459 UvrC Helix-hairpin-helix N-terminal DGM93_11520 PF01451 Low molecular weight phosphotyrosine protein phosphatase DGM93_11525 PF02348 Cytidylyltransferase DGM93_11530 PF02606 Tetraacyldisaccharide-1-P 4'-kinase DGM93_11535 PF00664 ABC transporter transmembrane region DGM93_11535 PF00005 ABC transporter DGM93_11545 PF01618 MotA/TolQ/ExbB proton channel family DGM93_11550 PF00753 Metallo-beta-lactamase superfamily DGM93_11550 PF03772 Competence protein DGM93_11560 PF00005 ABC transporter DGM93_11565 PF02687 FtsX-like permease family DGM93_11565 PF12704 MacB-like periplasmic core domain DGM93_11575 PF03937 Flavinator of succinate dehydrogenase DGM93_11580 PF13085 2Fe-2S iron-sulfur cluster binding domain DGM93_11590 PF00890 FAD binding domain DGM93_11590 PF02910 Fumarate reductase flavoprotein C-term DGM93_11595 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DGM93_11600 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DGM93_11610 PF01571 Aminomethyltransferase folate-binding domain DGM93_11615 PF00005 ABC transporter DGM93_11615 PF17912 MalK OB fold domain DGM93_11620 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DGM93_11620 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DGM93_11625 PF02685 Glucokinase DGM93_11630 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DGM93_11635 PF00920 Dehydratase family DGM93_11640 PF01081 KDPG and KHG aldolase DGM93_11650 PF00873 AcrB/AcrD/AcrF family DGM93_11655 PF00873 AcrB/AcrD/AcrF family DGM93_11660 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DGM93_11670 PF00034 Cytochrome c DGM93_11715 PF00512 His Kinase A (phospho-acceptor) domain DGM93_11715 PF09308 LuxQ, periplasmic DGM93_11715 PF00072 Response regulator receiver domain DGM93_11715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM93_11720 PF16921 Tex protein YqgF-like domain DGM93_11720 PF17674 HHH domain DGM93_11720 PF00575 S1 RNA binding domain DGM93_11720 PF09371 Tex-like protein N-terminal domain DGM93_11730 PF00355 Rieske [2Fe-2S] domain DGM93_11730 PF01266 FAD dependent oxidoreductase DGM93_11745 PF00561 alpha/beta hydrolase fold DGM93_11755 PF01066 CDP-alcohol phosphatidyltransferase DGM93_11775 PF03618 Kinase/pyrophosphorylase DGM93_11780 PF00391 PEP-utilising enzyme, mobile domain DGM93_11780 PF02896 PEP-utilising enzyme, TIM barrel domain DGM93_11780 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DGM93_11790 PF00929 Exonuclease DGM93_11795 PF14437 MafB19-like deaminase DGM93_11800 PF02742 Iron dependent repressor, metal binding and dimerisation domain DGM93_11800 PF01325 Iron dependent repressor, N-terminal DNA binding domain DGM93_11805 PF01566 Natural resistance-associated macrophage protein DGM93_11810 PF00561 alpha/beta hydrolase fold DGM93_11825 PF05977 Transmembrane secretion effector DGM93_11830 PF07969 Amidohydrolase family DGM93_11840 PF00857 Isochorismatase family DGM93_11860 PF00196 Bacterial regulatory proteins, luxR family DGM93_11860 PF00072 Response regulator receiver domain DGM93_11890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM93_11890 PF03466 LysR substrate binding domain DGM93_11895 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus DGM93_11895 PF00361 Proton-conducting membrane transporter DGM93_11895 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DGM93_11900 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) DGM93_11910 PF08240 Alcohol dehydrogenase GroES-like domain DGM93_11910 PF00107 Zinc-binding dehydrogenase DGM93_11920 PF00872 Transposase, Mutator family DGM93_11940 PF00117 Glutamine amidotransferase class-I DGM93_11940 PF00958 GMP synthase C terminal domain DGM93_11940 PF02540 NAD synthase DGM93_11945 PF00478 IMP dehydrogenase / GMP reductase domain DGM93_11945 PF00571 CBS domain DGM93_11950 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DGM93_11950 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DGM93_11965 PF00999 Sodium/hydrogen exchanger family DGM93_11965 PF02254 TrkA-N domain DGM93_11970 PF00483 Nucleotidyl transferase DGM93_11975 PF02719 Polysaccharide biosynthesis protein DGM93_11980 PF00953 Glycosyl transferase family 4 DGM93_11985 PF18073 Rubredoxin metal binding domain DGM93_11995 PF00216 Bacterial DNA-binding protein DGM93_12000 PF00575 S1 RNA binding domain DGM93_12005 PF02224 Cytidylate kinase DGM93_12010 PF00444 Ribosomal protein L36 DGM93_12020 PF04371 Porphyromonas-type peptidyl-arginine deiminase DGM93_12025 PF00795 Carbon-nitrogen hydrolase DGM93_12050 PF00528 Binding-protein-dependent transport system inner membrane component DGM93_12055 PF00528 Binding-protein-dependent transport system inner membrane component DGM93_12075 PF00356 Bacterial regulatory proteins, lacI family DGM93_12090 PF03795 YCII-related domain DGM93_12095 PF02616 Segregation and condensation protein ScpA DGM93_12100 PF04079 Segregation and condensation complex subunit ScpB DGM93_12105 PF00849 RNA pseudouridylate synthase DGM93_12105 PF01479 S4 domain DGM93_12120 PF00795 Carbon-nitrogen hydrolase DGM93_12125 PF00155 Aminotransferase class I and II DGM93_12130 PF00005 ABC transporter DGM93_12135 PF03379 CcmB protein DGM93_12140 PF01578 Cytochrome C assembly protein DGM93_12150 PF03100 CcmE DGM93_12155 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal DGM93_12155 PF01578 Cytochrome C assembly protein DGM93_12160 PF08534 Redoxin DGM93_12165 PF03918 Cytochrome C biogenesis protein DGM93_12180 PF00561 alpha/beta hydrolase fold DGM93_12190 PF00664 ABC transporter transmembrane region DGM93_12190 PF00005 ABC transporter DGM93_12195 PF00005 ABC transporter DGM93_12195 PF00664 ABC transporter transmembrane region DGM93_12200 PF01654 Cytochrome bd terminal oxidase subunit I DGM93_12205 PF02322 Cytochrome bd terminal oxidase subunit II DGM93_12225 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DGM93_12225 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain DGM93_12235 PF00171 Aldehyde dehydrogenase family DGM93_12240 PF00696 Amino acid kinase family DGM93_12240 PF01472 PUA domain DGM93_12250 PF00206 Lyase DGM93_12255 PF01118 Semialdehyde dehydrogenase, NAD binding domain DGM93_12265 PF00696 Amino acid kinase family DGM93_12265 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase DGM93_12270 PF07687 Peptidase dimerisation domain DGM93_12270 PF01546 Peptidase family M20/M25/M40 DGM93_12280 PF00764 Arginosuccinate synthase DGM93_12285 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DGM93_12285 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DGM93_12295 PF09190 DALR domain DGM93_12295 PF01406 tRNA synthetases class I (C) catalytic domain DGM93_12300 PF02657 Fe-S metabolism associated domain DGM93_12310 PF01258 Prokaryotic dksA/traR C4-type zinc finger DGM93_12315 PF01809 Putative membrane protein insertion efficiency factor DGM93_12320 PF01979 Amidohydrolase family DGM93_12325 PF01551 Peptidase family M23 DGM93_12325 PF08460 Bacterial SH3 domain DGM93_12345 PF06751 Ethanolamine ammonia lyase large subunit (EutB) DGM93_12350 PF05985 Ethanolamine ammonia-lyase light chain (EutC) DGM93_12360 PF00753 Metallo-beta-lactamase superfamily DGM93_12380 PF05598 Transposase domain (DUF772) DGM93_12380 PF01609 Transposase DDE domain DGM93_12390 PF00295 Glycosyl hydrolases family 28 DGM93_12410 PF13419 Haloacid dehalogenase-like hydrolase DGM93_12420 PF01979 Amidohydrolase family DGM93_12430 PF01132 Elongation factor P (EF-P) OB domain DGM93_12430 PF08207 Elongation factor P (EF-P) KOW-like domain DGM93_12430 PF09285 Elongation factor P, C-terminal DGM93_12435 PF04055 Radical SAM superfamily DGM93_12440 PF13188 PAS domain DGM93_12440 PF00990 Diguanylate cyclase, GGDEF domain DGM93_12440 PF03707 Bacterial signalling protein N terminal repeat DGM93_12440 PF00563 EAL domain DGM93_12450 PF00588 SpoU rRNA Methylase family DGM93_12455 PF00459 Inositol monophosphatase family DGM93_12460 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DGM93_12460 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DGM93_12465 PF00545 ribonuclease DGM93_12475 PF00005 ABC transporter DGM93_12475 PF12848 ABC transporter DGM93_12475 PF16326 ABC transporter C-terminal domain DGM93_12480 PF00270 DEAD/DEAH box helicase DGM93_12480 PF00271 Helicase conserved C-terminal domain DGM93_12480 PF03880 DbpA RNA binding domain DGM93_12485 PF00156 Phosphoribosyl transferase domain DGM93_12490 PF02696 Uncharacterized ACR, YdiU/UPF0061 family DGM93_12495 PF00135 Carboxylesterase family DGM93_12515 PF02798 Glutathione S-transferase, N-terminal domain DGM93_12515 PF14497 Glutathione S-transferase, C-terminal domain DGM93_12520 PF00313 'Cold-shock' DNA-binding domain DGM93_12530 PF07152 YaeQ protein DGM93_12540 PF00990 Diguanylate cyclase, GGDEF domain DGM93_12540 PF00072 Response regulator receiver domain DGM93_12540 PF00563 EAL domain DGM93_12545 PF01435 Peptidase family M48 DGM93_12550 PF00749 tRNA synthetases class I (E and Q), catalytic domain DGM93_12555 PF00106 short chain dehydrogenase DGM93_12560 PF05233 PHB accumulation regulatory domain DGM93_12560 PF07879 PHB/PHA accumulation regulator DNA-binding domain DGM93_12580 PF08676 MutL C terminal dimerisation domain DGM93_12580 PF01119 DNA mismatch repair protein, C-terminal domain DGM93_12585 PF11741 AMIN domain DGM93_12585 PF01520 N-acetylmuramoyl-L-alanine amidase DGM93_12590 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DGM93_12595 PF03853 YjeF-related protein N-terminus DGM93_12595 PF01256 Carbohydrate kinase DGM93_12600 PF08331 Domain of unknown function (DUF1730) DGM93_12605 PF13742 OB-fold nucleic acid binding domain DGM93_12605 PF02601 Exonuclease VII, large subunit DGM93_12620 PF03781 Sulfatase-modifying factor enzyme 1 DGM93_12635 PF01612 3'-5' exonuclease DGM93_12635 PF00570 HRDC domain DGM93_12640 PF04679 ATP dependent DNA ligase C terminal region DGM93_12640 PF01068 ATP dependent DNA ligase domain DGM93_12640 PF13298 DNA polymerase Ligase (LigD) DGM93_12665 PF01584 CheW-like domain DGM93_12670 PF02743 Cache domain DGM93_12670 PF00672 HAMP domain DGM93_12670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGM93_12675 PF02245 Methylpurine-DNA glycosylase (MPG) DGM93_12680 PF00270 DEAD/DEAH box helicase DGM93_12680 PF00271 Helicase conserved C-terminal domain DGM93_12680 PF08494 DEAD/H associated DGM93_12700 PF04386 Stringent starvation protein B DGM93_12705 PF02798 Glutathione S-transferase, N-terminal domain DGM93_12705 PF00043 Glutathione S-transferase, C-terminal domain DGM93_12710 PF02167 Cytochrome C1 family DGM93_12715 PF00032 Cytochrome b(C-terminal)/b6/petD DGM93_12715 PF00033 Cytochrome b/b6/petB DGM93_12720 PF00355 Rieske [2Fe-2S] domain DGM93_12720 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal DGM93_12730 PF01464 Transglycosylase SLT domain DGM93_12745 PF01938 TRAM domain DGM93_12745 PF00919 Uncharacterized protein family UPF0004 DGM93_12745 PF04055 Radical SAM superfamily DGM93_12750 PF02562 PhoH-like protein DGM93_12760 PF02130 Uncharacterized protein family UPF0054 DGM93_12770 PF03471 Transporter associated domain DGM93_12770 PF00571 CBS domain DGM93_12785 PF00171 Aldehyde dehydrogenase family DGM93_12790 PF00528 Binding-protein-dependent transport system inner membrane component DGM93_12795 PF00528 Binding-protein-dependent transport system inner membrane component DGM93_12800 PF00005 ABC transporter DGM93_12800 PF08402 TOBE domain DGM93_12805 PF02321 Outer membrane efflux protein DGM93_12810 PF07690 Major Facilitator Superfamily DGM93_12815 PF13533 Biotin-lipoyl like DGM93_12820 PF13416 Bacterial extracellular solute-binding protein DGM93_12825 PF00202 Aminotransferase class-III DGM93_12830 PF00120 Glutamine synthetase, catalytic domain DGM93_12835 PF07722 Peptidase C26 DGM93_12840 PF00120 Glutamine synthetase, catalytic domain DGM93_12845 PF01266 FAD dependent oxidoreductase DGM93_12850 PF00072 Response regulator receiver domain DGM93_12850 PF00990 Diguanylate cyclase, GGDEF domain DGM93_12855 PF01814 Hemerythrin HHE cation binding domain DGM93_12860 PF00083 Sugar (and other) transporter DGM93_12860 PF07690 Major Facilitator Superfamily DGM93_12870 PF00384 Molybdopterin oxidoreductase DGM93_12875 PF02634 FdhD/NarQ family DGM93_12880 PF07690 Major Facilitator Superfamily DGM93_12895 PF00202 Aminotransferase class-III DGM93_12905 PF04286 Protein of unknown function (DUF445) DGM93_12910 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DGM93_12910 PF00512 His Kinase A (phospho-acceptor) domain DGM93_12910 PF01627 Hpt domain DGM93_12910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM93_12910 PF00072 Response regulator receiver domain DGM93_12910 PF00672 HAMP domain DGM93_12915 PF00072 Response regulator receiver domain DGM93_12920 PF07690 Major Facilitator Superfamily DGM93_12925 PF02203 Tar ligand binding domain homologue DGM93_12925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGM93_12925 PF00672 HAMP domain DGM93_12960 PF05088 Bacterial NAD-glutamate dehydrogenase DGM93_12970 PF00529 HlyD membrane-fusion protein of T1SS DGM93_12970 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DGM93_12975 PF00873 AcrB/AcrD/AcrF family DGM93_12980 PF00356 Bacterial regulatory proteins, lacI family DGM93_12985 PF00391 PEP-utilising enzyme, mobile domain DGM93_12985 PF00381 PTS HPr component phosphorylation site DGM93_12985 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DGM93_12985 PF05524 PEP-utilising enzyme, N-terminal DGM93_12985 PF02896 PEP-utilising enzyme, TIM barrel domain DGM93_12990 PF00294 pfkB family carbohydrate kinase DGM93_12995 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DGM93_13020 PF00872 Transposase, Mutator family DGM93_13030 PF02355 Protein export membrane protein DGM93_13030 PF07549 SecD/SecF GG Motif DGM93_13035 PF07549 SecD/SecF GG Motif DGM93_13035 PF13721 SecD export protein N-terminal TM region DGM93_13035 PF02355 Protein export membrane protein DGM93_13040 PF02699 Preprotein translocase subunit DGM93_13045 PF01702 Queuine tRNA-ribosyltransferase DGM93_13050 PF02547 Queuosine biosynthesis protein DGM93_13095 PF02927 Cellulase N-terminal ig-like domain DGM93_13095 PF00759 Glycosyl hydrolase family 9 DGM93_13105 PF00037 4Fe-4S binding domain DGM93_13120 PF01467 Cytidylyltransferase-like DGM93_13130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM93_13130 PF00183 Hsp90 protein DGM93_13145 PF00872 Transposase, Mutator family DGM93_13175 PF03421 YopJ Serine/Threonine acetyltransferase DGM93_13225 PF03135 CagE, TrbE, VirB family, component of type IV transporter system DGM93_13230 PF05101 Type IV secretory pathway, VirB3-like protein DGM93_13240 PF01464 Transglycosylase SLT domain DGM93_13245 PF00437 Type II/IV secretion system protein DGM93_13250 PF03743 Bacterial conjugation TrbI-like protein DGM93_13270 PF02534 Type IV secretory system Conjugative DNA transfer DGM93_13285 PF12344 Ultra-violet resistance protein B DGM93_13285 PF02151 UvrB/uvrC motif DGM93_13285 PF17757 UvrB interaction domain DGM93_13285 PF00271 Helicase conserved C-terminal domain DGM93_13285 PF04851 Type III restriction enzyme, res subunit DGM93_13450 PF00182 Chitinase class I DGM93_13505 PF01555 DNA methylase DGM93_13540 PF07963 Prokaryotic N-terminal methylation motif DGM93_13540 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor DGM93_13545 PF05567 Neisseria PilC beta-propeller domain DGM93_13570 PF07694 5TMR of 5TMR-LYT DGM93_13570 PF06580 Histidine kinase DGM93_13575 PF11892 Domain of unknown function (DUF3412) DGM93_13575 PF03641 Possible lysine decarboxylase DGM93_13575 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases DGM93_13580 PF00593 TonB dependent receptor DGM93_13590 PF01914 MarC family integral membrane protein DGM93_13600 PF00462 Glutaredoxin DGM93_13605 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DGM93_13605 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DGM93_13610 PF02222 ATP-grasp domain DGM93_13610 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DGM93_13615 PF00731 AIR carboxylase DGM93_13625 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DGM93_13625 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DGM93_13650 PF00575 S1 RNA binding domain DGM93_13650 PF01138 3' exoribonuclease family, domain 1 DGM93_13650 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DGM93_13650 PF00013 KH domain DGM93_13650 PF03725 3' exoribonuclease family, domain 2 DGM93_13655 PF00312 Ribosomal protein S15 DGM93_13660 PF09157 Pseudouridine synthase II TruB, C-terminal DGM93_13660 PF16198 tRNA pseudouridylate synthase B C-terminal domain DGM93_13660 PF01509 TruB family pseudouridylate synthase (N terminal domain) DGM93_13665 PF02033 Ribosome-binding factor A DGM93_13670 PF00009 Elongation factor Tu GTP binding domain DGM93_13670 PF11987 Translation-initiation factor 2 DGM93_13670 PF08364 Bacterial translation initiation factor IF-2 associated region DGM93_13670 PF04760 Translation initiation factor IF-2, N-terminal region DGM93_13675 PF08529 NusA N-terminal domain DGM93_13675 PF13184 NusA-like KH domain DGM93_13675 PF00575 S1 RNA binding domain DGM93_13680 PF17384 RimP C-terminal SH3 domain DGM93_13680 PF02576 RimP N-terminal domain DGM93_13690 PF00361 Proton-conducting membrane transporter DGM93_13695 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus DGM93_13695 PF00361 Proton-conducting membrane transporter DGM93_13700 PF00361 Proton-conducting membrane transporter DGM93_13700 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DGM93_13705 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DGM93_13710 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DGM93_13715 PF12838 4Fe-4S dicluster domain DGM93_13720 PF00146 NADH dehydrogenase DGM93_13725 PF00384 Molybdopterin oxidoreductase DGM93_13725 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DGM93_13725 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal DGM93_13730 PF10531 SLBB domain DGM93_13730 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DGM93_13730 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DGM93_13740 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DGM93_13745 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DGM93_13750 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DGM93_13755 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DGM93_13770 PF00121 Triosephosphate isomerase DGM93_13775 PF00106 short chain dehydrogenase DGM93_13790 PF03707 Bacterial signalling protein N terminal repeat DGM93_13790 PF00990 Diguanylate cyclase, GGDEF domain DGM93_13790 PF00563 EAL domain DGM93_13805 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DGM93_13805 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DGM93_13805 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DGM93_13805 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DGM93_13810 PF17848 Acetyl-coA carboxylase zinc finger domain DGM93_13810 PF01039 Carboxyl transferase domain DGM93_13815 PF00290 Tryptophan synthase alpha chain DGM93_13825 PF00291 Pyridoxal-phosphate dependent enzyme DGM93_13830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM93_13830 PF03466 LysR substrate binding domain DGM93_13835 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DGM93_13840 PF01416 tRNA pseudouridine synthase DGM93_13855 PF02774 Semialdehyde dehydrogenase, dimerisation domain DGM93_13855 PF01118 Semialdehyde dehydrogenase, NAD binding domain DGM93_13860 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DGM93_13860 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DGM93_13865 PF01264 Chorismate synthase DGM93_13870 PF05175 Methyltransferase small domain DGM93_13875 PF02630 SCO1/SenC DGM93_13880 PF02666 Phosphatidylserine decarboxylase DGM93_13890 PF05872 Bacterial protein of unknown function (DUF853) DGM93_13915 PF03449 Transcription elongation factor, N-terminal DGM93_13915 PF01272 Transcription elongation factor, GreA/GreB, C-term DGM93_13920 PF04055 Radical SAM superfamily DGM93_13920 PF18693 TRAM domain DGM93_13920 PF00919 Uncharacterized protein family UPF0004 DGM93_13925 PF01738 Dienelactone hydrolase family DGM93_13945 PF00692 dUTPase DGM93_13955 PF10609 NUBPL iron-transfer P-loop NTPase DGM93_13960 PF07715 TonB-dependent Receptor Plug Domain DGM93_13960 PF00593 TonB dependent receptor DGM93_13990 PF05649 Peptidase family M13 DGM93_13990 PF01431 Peptidase family M13 DGM93_14015 PF07992 Pyridine nucleotide-disulphide oxidoreductase DGM93_14015 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DGM93_14020 PF01266 FAD dependent oxidoreductase DGM93_14025 PF04235 Protein of unknown function (DUF418) DGM93_14030 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DGM93_14035 PF00877 NlpC/P60 family DGM93_14040 PF00877 NlpC/P60 family DGM93_14055 PF00375 Sodium:dicarboxylate symporter family DGM93_14060 PF00245 Alkaline phosphatase DGM93_14070 PF09179 TilS substrate binding domain DGM93_14070 PF01171 PP-loop family DGM93_14070 PF11734 TilS substrate C-terminal domain DGM93_14075 PF02609 Exonuclease VII small subunit DGM93_14085 PF14521 Lysine-specific metallo-endopeptidase DGM93_14095 PF01523 Putative modulator of DNA gyrase DGM93_14100 PF04751 Protein of unknown function (DUF615) DGM93_14105 PF01523 Putative modulator of DNA gyrase DGM93_14115 PF13502 AsmA-like C-terminal region DGM93_14115 PF13116 Protein of unknown function DGM93_14120 PF10150 Ribonuclease E/G family DGM93_14120 PF00575 S1 RNA binding domain DGM93_14125 PF02545 Maf-like protein DGM93_14130 PF04402 Protein of unknown function (DUF541) DGM93_14145 PF02590 Predicted SPOUT methyltransferase DGM93_14160 PF01467 Cytidylyltransferase-like DGM93_14180 PF13603 Leucyl-tRNA synthetase, Domain 2 DGM93_14180 PF00133 tRNA synthetases class I (I, L, M and V) DGM93_14180 PF08264 Anticodon-binding domain of tRNA DGM93_14190 PF00085 Thioredoxin DGM93_14210 PF07043 Protein of unknown function (DUF1328) DGM93_14215 PF04070 Domain of unknown function (DUF378) DGM93_14220 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DGM93_14230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM93_14230 PF03466 LysR substrate binding domain DGM93_14235 PF01022 Bacterial regulatory protein, arsR family DGM93_14265 PF00664 ABC transporter transmembrane region DGM93_14265 PF00005 ABC transporter DGM93_14275 PF00873 AcrB/AcrD/AcrF family DGM93_14290 PF02321 Outer membrane efflux protein DGM93_14295 PF00486 Transcriptional regulatory protein, C terminal DGM93_14295 PF00072 Response regulator receiver domain DGM93_14300 PF00672 HAMP domain DGM93_14300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM93_14300 PF00512 His Kinase A (phospho-acceptor) domain DGM93_14305 PF00999 Sodium/hydrogen exchanger family DGM93_14310 PF00144 Beta-lactamase DGM93_14315 PF03737 Aldolase/RraA DGM93_14330 PF00990 Diguanylate cyclase, GGDEF domain DGM93_14335 PF00849 RNA pseudouridylate synthase DGM93_14335 PF01479 S4 domain DGM93_14340 PF08448 PAS fold DGM93_14340 PF00990 Diguanylate cyclase, GGDEF domain DGM93_14340 PF00563 EAL domain DGM93_14345 PF00271 Helicase conserved C-terminal domain DGM93_14345 PF00270 DEAD/DEAH box helicase DGM93_14345 PF03880 DbpA RNA binding domain DGM93_14350 PF08281 Sigma-70, region 4 DGM93_14350 PF04542 Sigma-70 region 2 DGM93_14395 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DGM93_14395 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DGM93_14405 PF00654 Voltage gated chloride channel DGM93_14410 PF00107 Zinc-binding dehydrogenase DGM93_14410 PF08240 Alcohol dehydrogenase GroES-like domain DGM93_14425 PF00593 TonB dependent receptor DGM93_14425 PF07715 TonB-dependent Receptor Plug Domain DGM93_14450 PF00082 Subtilase family DGM93_14450 PF01483 Proprotein convertase P-domain DGM93_14460 PF00082 Subtilase family DGM93_14460 PF01483 Proprotein convertase P-domain DGM93_14470 PF00248 Aldo/keto reductase family DGM93_14475 PF07690 Major Facilitator Superfamily DGM93_14480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM93_14480 PF03466 LysR substrate binding domain DGM93_14490 PF06719 AraC-type transcriptional regulator N-terminus DGM93_14490 PF12833 Helix-turn-helix domain DGM93_14500 PF16859 Tetracyclin repressor-like, C-terminal domain DGM93_14500 PF00440 Bacterial regulatory proteins, tetR family DGM93_14505 PF02321 Outer membrane efflux protein DGM93_14510 PF00873 AcrB/AcrD/AcrF family DGM93_14515 PF00529 HlyD membrane-fusion protein of T1SS DGM93_14515 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DGM93_14525 PF01475 Ferric uptake regulator family DGM93_14530 PF00749 tRNA synthetases class I (E and Q), catalytic domain DGM93_14555 PF06123 Inner membrane protein CreD DGM93_14575 PF00072 Response regulator receiver domain DGM93_14575 PF00486 Transcriptional regulatory protein, C terminal DGM93_14580 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ DGM93_14590 PF03461 TRCF domain DGM93_14590 PF00271 Helicase conserved C-terminal domain DGM93_14590 PF00270 DEAD/DEAH box helicase DGM93_14590 PF17757 UvrB interaction domain DGM93_14590 PF02559 CarD-like/TRCF domain DGM93_14600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM93_14600 PF02895 Signal transducing histidine kinase, homodimeric domain DGM93_14600 PF09078 CheY binding DGM93_14600 PF01584 CheW-like domain DGM93_14600 PF01627 Hpt domain DGM93_14605 PF00672 HAMP domain DGM93_14605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGM93_14605 PF02203 Tar ligand binding domain homologue DGM93_14610 PF01584 CheW-like domain DGM93_14615 PF00563 EAL domain DGM93_14615 PF00990 Diguanylate cyclase, GGDEF domain DGM93_14615 PF13426 PAS domain DGM93_14620 PF03705 CheR methyltransferase, all-alpha domain DGM93_14620 PF01739 CheR methyltransferase, SAM binding domain DGM93_14625 PF01339 CheB methylesterase DGM93_14625 PF00072 Response regulator receiver domain DGM93_14635 PF01431 Peptidase family M13 DGM93_14635 PF05649 Peptidase family M13 DGM93_14645 PF00300 Histidine phosphatase superfamily (branch 1) DGM93_14650 PF04493 Endonuclease V DGM93_14660 PF02678 Pirin DGM93_14660 PF05726 Pirin C-terminal cupin domain DGM93_14675 PF02678 Pirin DGM93_14675 PF05726 Pirin C-terminal cupin domain DGM93_14680 PF02554 Carbon starvation protein CstA DGM93_14680 PF13722 5TM C-terminal transporter carbon starvation CstA DGM93_14685 PF04328 Selenoprotein, putative DGM93_14700 PF12796 Ankyrin repeats (3 copies) DGM93_14730 PF02625 XdhC and CoxI family DGM93_14730 PF13478 XdhC Rossmann domain DGM93_14735 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DGM93_14735 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DGM93_14740 PF00941 FAD binding domain in molybdopterin dehydrogenase DGM93_14740 PF03450 CO dehydrogenase flavoprotein C-terminal domain DGM93_14745 PF00111 2Fe-2S iron-sulfur cluster binding domain DGM93_14745 PF01799 [2Fe-2S] binding domain DGM93_14745 PF10518 TAT (twin-arginine translocation) pathway signal sequence DGM93_14750 PF02801 Beta-ketoacyl synthase, C-terminal domain DGM93_14750 PF14765 Polyketide synthase dehydratase DGM93_14750 PF00698 Acyl transferase domain DGM93_14750 PF08240 Alcohol dehydrogenase GroES-like domain DGM93_14750 PF00107 Zinc-binding dehydrogenase DGM93_14750 PF16197 Ketoacyl-synthetase C-terminal extension DGM93_14750 PF00109 Beta-ketoacyl synthase, N-terminal domain DGM93_14750 PF00550 Phosphopantetheine attachment site DGM93_14750 PF08659 KR domain DGM93_14755 PF00990 Diguanylate cyclase, GGDEF domain DGM93_14755 PF00563 EAL domain DGM93_14755 PF00360 Phytochrome region DGM93_14755 PF01590 GAF domain DGM93_14760 PF00436 Single-strand binding protein family DGM93_14765 PF00348 Polyprenyl synthetase DGM93_14775 PF02875 Mur ligase family, glutamate ligase domain DGM93_14775 PF08245 Mur ligase middle domain DGM93_14790 PF00696 Amino acid kinase family DGM93_14790 PF01842 ACT domain DGM93_14795 PF02567 Phenazine biosynthesis-like protein DGM93_14800 PF02567 Phenazine biosynthesis-like protein DGM93_14810 PF02566 OsmC-like protein DGM93_14815 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DGM93_14815 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DGM93_14820 PF03652 Holliday junction resolvase DGM93_14825 PF02622 Uncharacterized ACR, COG1678 DGM93_14830 PF13687 Domain of unknown function (DUF4153) DGM93_14835 PF13673 Acetyltransferase (GNAT) domain DGM93_14835 PF13302 Acetyltransferase (GNAT) domain DGM93_14835 PF03352 Methyladenine glycosylase DGM93_14835 PF00117 Glutamine amidotransferase class-I DGM93_14835 PF00958 GMP synthase C terminal domain DGM93_14850 PF00437 Type II/IV secretion system protein DGM93_14855 PF00437 Type II/IV secretion system protein DGM93_14860 PF01168 Alanine racemase, N-terminal domain DGM93_14865 PF14748 Pyrroline-5-carboxylate reductase dimerisation DGM93_14865 PF03807 NADP oxidoreductase coenzyme F420-dependent DGM93_14875 PF01551 Peptidase family M23 DGM93_14895 PF01965 DJ-1/PfpI family DGM93_14905 PF02082 Transcriptional regulator DGM93_14910 PF01458 Uncharacterized protein family (UPF0051) DGM93_14915 PF00005 ABC transporter DGM93_14920 PF01458 Uncharacterized protein family (UPF0051) DGM93_14925 PF00266 Aminotransferase class-V DGM93_14935 PF00583 Acetyltransferase (GNAT) family DGM93_14940 PF00355 Rieske [2Fe-2S] domain DGM93_14945 PF07715 TonB-dependent Receptor Plug Domain DGM93_14945 PF00593 TonB dependent receptor DGM93_14950 PF13640 2OG-Fe(II) oxygenase superfamily DGM93_14950 PF18331 PKHD-type hydroxylase C-terminal domain DGM93_14975 PF00872 Transposase, Mutator family DGM93_14980 PF02424 ApbE family DGM93_14985 PF00175 Oxidoreductase NAD-binding domain DGM93_14985 PF00258 Flavodoxin DGM93_14985 PF00667 FAD binding domain DGM93_14990 PF05962 HutD DGM93_15010 PF01636 Phosphotransferase enzyme family DGM93_15015 PF00483 Nucleotidyl transferase DGM93_15020 PF00308 Bacterial dnaA protein DGM93_15025 PF01594 AI-2E family transporter DGM93_15035 PF00586 AIR synthase related protein, N-terminal domain DGM93_15035 PF02769 AIR synthase related protein, C-terminal domain DGM93_15050 PF00551 Formyl transferase DGM93_15070 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DGM93_15075 PF01722 BolA-like protein DGM93_15080 PF00571 CBS domain DGM93_15080 PF01380 SIS domain DGM93_15095 PF03968 OstA-like protein DGM93_15100 PF00005 ABC transporter DGM93_15105 PF04552 Sigma-54, DNA binding domain DGM93_15105 PF00309 Sigma-54 factor, Activator interacting domain (AID) DGM93_15105 PF04963 Sigma-54 factor, core binding domain DGM93_15110 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DGM93_15115 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DGM93_15120 PF02603 HPr Serine kinase N terminus DGM93_15120 PF07475 HPr Serine kinase C-terminal domain DGM93_15125 PF03668 P-loop ATPase protein family DGM93_15135 PF00381 PTS HPr component phosphorylation site DGM93_15140 PF02896 PEP-utilising enzyme, TIM barrel domain DGM93_15140 PF00391 PEP-utilising enzyme, mobile domain DGM93_15140 PF05524 PEP-utilising enzyme, N-terminal DGM93_15150 PF00571 CBS domain DGM93_15150 PF01769 Divalent cation transporter DGM93_15150 PF03448 MgtE intracellular N domain DGM93_15155 PF00756 Putative esterase DGM93_15210 PF01751 Toprim domain DGM93_15210 PF01131 DNA topoisomerase DGM93_15230 PF13406 Transglycosylase SLT domain DGM93_15280 PF00324 Amino acid permease DGM93_15290 PF00544 Pectate lyase DGM93_15305 PF00561 alpha/beta hydrolase fold DGM93_15315 PF00196 Bacterial regulatory proteins, luxR family DGM93_15320 PF00324 Amino acid permease DGM93_15340 PF12706 Beta-lactamase superfamily domain DGM93_15345 PF04820 Tryptophan halogenase DGM93_15405 PF00376 MerR family regulatory protein DGM93_15405 PF09278 MerR, DNA binding DGM93_15410 PF07690 Major Facilitator Superfamily DGM93_15420 PF03738 Glutathionylspermidine synthase preATP-grasp DGM93_15445 PF04012 PspA/IM30 family DGM93_15455 PF01243 Pyridoxamine 5'-phosphate oxidase DGM93_15455 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region DGM93_15460 PF01202 Shikimate kinase DGM93_15465 PF01761 3-dehydroquinate synthase DGM93_15475 PF01208 Uroporphyrinogen decarboxylase (URO-D) DGM93_15480 PF07690 Major Facilitator Superfamily DGM93_15485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM93_15485 PF00672 HAMP domain DGM93_15485 PF17149 Periplasmic sensor domain found in signal transduction proteins DGM93_15485 PF00072 Response regulator receiver domain DGM93_15485 PF01627 Hpt domain DGM93_15485 PF00512 His Kinase A (phospho-acceptor) domain DGM93_15490 PF00672 HAMP domain DGM93_15490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM93_15490 PF00512 His Kinase A (phospho-acceptor) domain DGM93_15490 PF01627 Hpt domain DGM93_15490 PF00072 Response regulator receiver domain DGM93_15490 PF17149 Periplasmic sensor domain found in signal transduction proteins DGM93_15495 PF01627 Hpt domain DGM93_15495 PF00072 Response regulator receiver domain DGM93_15495 PF17149 Periplasmic sensor domain found in signal transduction proteins DGM93_15495 PF00672 HAMP domain DGM93_15495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM93_15495 PF00512 His Kinase A (phospho-acceptor) domain DGM93_15505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM93_15505 PF00072 Response regulator receiver domain DGM93_15505 PF01627 Hpt domain DGM93_15505 PF00512 His Kinase A (phospho-acceptor) domain DGM93_15510 PF04264 YceI-like domain DGM93_15530 PF03313 Serine dehydratase alpha chain DGM93_15530 PF03315 Serine dehydratase beta chain DGM93_15535 PF00553 Cellulose binding domain DGM93_15535 PF00041 Fibronectin type III domain DGM93_15535 PF00704 Glycosyl hydrolases family 18 DGM93_15540 PF00696 Amino acid kinase family DGM93_15540 PF00742 Homoserine dehydrogenase DGM93_15540 PF03447 Homoserine dehydrogenase, NAD binding domain DGM93_15545 PF01053 Cys/Met metabolism PLP-dependent enzyme DGM93_15550 PF00561 alpha/beta hydrolase fold DGM93_15555 PF01551 Peptidase family M23 DGM93_15555 PF01476 LysM domain DGM93_15555 PF08525 Opacity-associated protein A N-terminal motif DGM93_15560 PF16658 Class II release factor RF3, C-terminal domain DGM93_15560 PF00009 Elongation factor Tu GTP binding domain DGM93_15565 PF03006 Haemolysin-III related DGM93_15570 PF05170 AsmA family DGM93_15575 PF00571 CBS domain DGM93_15575 PF00478 IMP dehydrogenase / GMP reductase domain DGM93_15580 PF00535 Glycosyl transferase family 2 DGM93_15585 PF00912 Transglycosylase DGM93_15590 PF01430 Hsp33 protein DGM93_15600 PF07715 TonB-dependent Receptor Plug Domain DGM93_15600 PF00593 TonB dependent receptor DGM93_15605 PF00440 Bacterial regulatory proteins, tetR family DGM93_15615 PF02770 Acyl-CoA dehydrogenase, middle domain DGM93_15615 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DGM93_15615 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DGM93_15615 PF09317 Domain of unknown function (DUF1974) DGM93_15640 PF00872 Transposase, Mutator family DGM93_15670 PF01597 Glycine cleavage H-protein DGM93_15675 PF01571 Aminomethyltransferase folate-binding domain DGM93_15675 PF08669 Glycine cleavage T-protein C-terminal barrel domain DGM93_15685 PF01145 SPFH domain / Band 7 family DGM93_15685 PF16200 C-terminal region of band_7 DGM93_15690 PF02694 Uncharacterised BCR, YnfA/UPF0060 family DGM93_15695 PF03819 MazG nucleotide pyrophosphohydrolase domain DGM93_15700 PF00459 Inositol monophosphatase family DGM93_15705 PF00293 NUDIX domain DGM93_15710 PF00202 Aminotransferase class-III DGM93_15715 PF04452 RNA methyltransferase DGM93_15720 PF02685 Glucokinase DGM93_15755 PF00872 Transposase, Mutator family DGM93_15770 PF01915 Glycosyl hydrolase family 3 C-terminal domain DGM93_15770 PF07691 PA14 domain DGM93_15770 PF14310 Fibronectin type III-like domain DGM93_15770 PF00933 Glycosyl hydrolase family 3 N terminal domain DGM93_15780 PF17678 Glycosyl hydrolase family 92 N-terminal domain DGM93_15780 PF07971 Glycosyl hydrolase family 92 DGM93_15785 PF01301 Glycosyl hydrolases family 35 DGM93_15825 PF03932 CutC family DGM93_15830 PF01112 Asparaginase DGM93_15845 PF13302 Acetyltransferase (GNAT) domain DGM93_15860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM93_15860 PF00072 Response regulator receiver domain DGM93_15860 PF01627 Hpt domain DGM93_15860 PF02895 Signal transducing histidine kinase, homodimeric domain DGM93_15860 PF01584 CheW-like domain DGM93_15865 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term DGM93_15865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGM93_15870 PF01584 CheW-like domain DGM93_15875 PF00072 Response regulator receiver domain DGM93_15880 PF00072 Response regulator receiver domain DGM93_15885 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain DGM93_15885 PF02951 Prokaryotic glutathione synthetase, N-terminal domain DGM93_15895 PF03747 ADP-ribosylglycohydrolase DGM93_15900 PF00814 Glycoprotease family DGM93_15905 PF04851 Type III restriction enzyme, res subunit DGM93_15905 PF13307 Helicase C-terminal domain DGM93_15915 PF14814 Bifunctional transglycosylase second domain DGM93_15915 PF00905 Penicillin binding protein transpeptidase domain DGM93_15915 PF00912 Transglycosylase DGM93_15920 PF00535 Glycosyl transferase family 2 DGM93_15935 PF02824 TGS domain DGM93_15935 PF04607 Region found in RelA / SpoT proteins DGM93_15935 PF13291 ACT domain DGM93_15945 PF12706 Beta-lactamase superfamily domain DGM93_15950 PF03070 TENA/THI-4/PQQC family DGM93_15955 PF05402 Coenzyme PQQ synthesis protein D (PqqD) DGM93_15960 PF04055 Radical SAM superfamily DGM93_15960 PF13186 Iron-sulfur cluster-binding domain DGM93_15975 PF02685 Glucokinase DGM93_15985 PF00872 Transposase, Mutator family DGM93_15995 PF04408 Helicase associated domain (HA2) DGM93_15995 PF00271 Helicase conserved C-terminal domain DGM93_15995 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold DGM93_15995 PF00270 DEAD/DEAH box helicase DGM93_15995 PF11898 Domain of unknown function (DUF3418) DGM93_16000 PF00210 Ferritin-like domain DGM93_16005 PF00270 DEAD/DEAH box helicase DGM93_16005 PF00271 Helicase conserved C-terminal domain DGM93_16005 PF00570 HRDC domain DGM93_16005 PF16124 RecQ zinc-binding DGM93_16005 PF09382 RQC domain DGM93_16045 PF02203 Tar ligand binding domain homologue DGM93_16045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGM93_16045 PF00672 HAMP domain DGM93_16050 PF01810 LysE type translocator DGM93_16055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM93_16055 PF03466 LysR substrate binding domain DGM93_16065 PF13426 PAS domain DGM93_16065 PF13581 Histidine kinase-like ATPase domain DGM93_16065 PF07536 HWE histidine kinase DGM93_16070 PF06508 Queuosine biosynthesis protein QueC DGM93_16080 PF04055 Radical SAM superfamily DGM93_16090 PF00691 OmpA family DGM93_16095 PF07676 WD40-like Beta Propeller Repeat DGM93_16095 PF04052 TolB amino-terminal domain DGM93_16105 PF02472 Biopolymer transport protein ExbD/TolR DGM93_16110 PF01618 MotA/TolQ/ExbB proton channel family DGM93_16115 PF03061 Thioesterase superfamily DGM93_16120 PF05491 RuvB C-terminal winged helix domain DGM93_16120 PF05496 Holliday junction DNA helicase RuvB P-loop domain DGM93_16120 PF17864 RuvB AAA lid domain DGM93_16130 PF02705 K+ potassium transporter DGM93_16135 PF07499 RuvA, C-terminal domain DGM93_16135 PF01330 RuvA N terminal domain DGM93_16140 PF02075 Crossover junction endodeoxyribonuclease RuvC DGM93_16145 PF01709 Transcriptional regulator DGM93_16160 PF02938 GAD domain DGM93_16160 PF00152 tRNA synthetases class II (D, K and N) DGM93_16160 PF01336 OB-fold nucleic acid binding domain DGM93_16175 PF07690 Major Facilitator Superfamily DGM93_16190 PF05506 Domain of unknown function (DUF756) DGM93_16190 PF04185 Phosphoesterase family DGM93_16200 PF07859 alpha/beta hydrolase fold DGM93_16200 PF13472 GDSL-like Lipase/Acylhydrolase family DGM93_16210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM93_16210 PF03466 LysR substrate binding domain DGM93_16220 PF12848 ABC transporter DGM93_16220 PF00005 ABC transporter DGM93_16225 PF00593 TonB dependent receptor DGM93_16225 PF07715 TonB-dependent Receptor Plug Domain DGM93_16235 PF07715 TonB-dependent Receptor Plug Domain DGM93_16235 PF00593 TonB dependent receptor DGM93_16240 PF07715 TonB-dependent Receptor Plug Domain DGM93_16240 PF00593 TonB dependent receptor DGM93_16255 PF02254 TrkA-N domain DGM93_16255 PF00999 Sodium/hydrogen exchanger family DGM93_16280 PF00593 TonB dependent receptor DGM93_16280 PF07660 Secretin and TonB N terminus short domain DGM93_16280 PF07715 TonB-dependent Receptor Plug Domain DGM93_16290 PF04183 IucA / IucC family DGM93_16290 PF06276 Ferric iron reductase FhuF-like transporter DGM93_16295 PF07690 Major Facilitator Superfamily DGM93_16300 PF06276 Ferric iron reductase FhuF-like transporter DGM93_16300 PF04183 IucA / IucC family DGM93_16305 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DGM93_16305 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DGM93_16320 PF02654 Cobalamin-5-phosphate synthase DGM93_16330 PF02277 Phosphoribosyltransferase DGM93_16335 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase DGM93_16340 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DGM93_16340 PF07685 CobB/CobQ-like glutamine amidotransferase domain DGM93_16345 PF00155 Aminotransferase class I and II DGM93_16350 PF17113 Regulatory signalling modulator protein AmpE DGM93_16350 PF03186 CobD/Cbib protein DGM93_16355 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP DGM93_16355 PF12557 Cob(I)alamin adenosyltransferase N terminal DGM93_16370 PF07715 TonB-dependent Receptor Plug Domain DGM93_16370 PF00593 TonB dependent receptor DGM93_16380 PF00004 ATPase family associated with various cellular activities (AAA) DGM93_16380 PF07724 AAA domain (Cdc48 subfamily) DGM93_16380 PF17871 AAA lid domain DGM93_16380 PF02861 Clp amino terminal domain, pathogenicity island component DGM93_16380 PF10431 C-terminal, D2-small domain, of ClpB protein DGM93_16390 PF01541 GIY-YIG catalytic domain DGM93_16425 PF00593 TonB dependent receptor DGM93_16425 PF07715 TonB-dependent Receptor Plug Domain DGM93_16430 PF02358 Trehalose-phosphatase DGM93_16435 PF00723 Glycosyl hydrolases family 15 DGM93_16440 PF00982 Glycosyltransferase family 20 DGM93_16445 PF01011 PQQ enzyme repeat DGM93_16465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGM93_16465 PF00672 HAMP domain DGM93_16465 PF02203 Tar ligand binding domain homologue DGM93_16470 PF04134 Protein of unknown function, DUF393 DGM93_16480 PF02578 Multi-copper polyphenol oxidoreductase laccase DGM93_16485 PF00849 RNA pseudouridylate synthase DGM93_16490 PF13525 Outer membrane lipoprotein DGM93_16500 PF00795 Carbon-nitrogen hydrolase DGM93_16500 PF02540 NAD synthase DGM93_16515 PF00549 CoA-ligase DGM93_16515 PF02629 CoA binding domain DGM93_16520 PF08442 ATP-grasp domain DGM93_16520 PF00549 CoA-ligase DGM93_16525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM93_16525 PF00512 His Kinase A (phospho-acceptor) domain DGM93_16530 PF02954 Bacterial regulatory protein, Fis family DGM93_16530 PF00072 Response regulator receiver domain DGM93_16530 PF00158 Sigma-54 interaction domain DGM93_16540 PF00437 Type II/IV secretion system protein DGM93_16540 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DGM93_16550 PF00437 Type II/IV secretion system protein DGM93_16550 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DGM93_16555 PF07963 Prokaryotic N-terminal methylation motif DGM93_16555 PF00114 Pilin (bacterial filament) DGM93_16560 PF00114 Pilin (bacterial filament) DGM93_16560 PF07963 Prokaryotic N-terminal methylation motif DGM93_16565 PF00482 Type II secretion system (T2SS), protein F DGM93_16570 PF06750 Bacterial Peptidase A24 N-terminal domain DGM93_16570 PF01478 Type IV leader peptidase family DGM93_16575 PF01121 Dephospho-CoA kinase DGM93_16600 PF00512 His Kinase A (phospho-acceptor) domain DGM93_16600 PF11808 Phosphate regulon sensor protein PhoR DGM93_16600 PF00989 PAS fold DGM93_16600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM93_16605 PF00486 Transcriptional regulatory protein, C terminal DGM93_16605 PF00072 Response regulator receiver domain DGM93_16615 PF08443 RimK-like ATP-grasp domain DGM93_16615 PF18030 RimK PreATP-grasp domain DGM93_16620 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DGM93_16620 PF00128 Alpha amylase, catalytic domain DGM93_16655 PF04002 RadC-like JAB domain DGM93_16670 PF00872 Transposase, Mutator family DGM93_16725 PF00563 EAL domain DGM93_16725 PF00990 Diguanylate cyclase, GGDEF domain DGM93_16725 PF08447 PAS fold DGM93_16725 PF08448 PAS fold DGM93_16760 PF04610 TrbL/VirB6 plasmid conjugal transfer protein DGM93_16805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM93_16805 PF03466 LysR substrate binding domain DGM93_16810 PF01381 Helix-turn-helix DGM93_16820 PF00872 Transposase, Mutator family DGM93_16840 PF13356 Arm DNA-binding domain DGM93_16840 PF14659 Phage integrase, N-terminal SAM-like domain DGM93_16840 PF00589 Phage integrase family DGM93_16850 PF03797 Autotransporter beta-domain DGM93_16850 PF00657 GDSL-like Lipase/Acylhydrolase DGM93_16860 PF05690 Thiazole biosynthesis protein ThiG DGM93_16865 PF02390 Putative methyltransferase DGM93_16870 PF02080 TrkA-C domain DGM93_16870 PF03600 Citrate transporter DGM93_16890 PF01557 Fumarylacetoacetate (FAA) hydrolase family DGM93_16895 PF01741 Large-conductance mechanosensitive channel, MscL DGM93_16905 PF00356 Bacterial regulatory proteins, lacI family DGM93_16915 PF00703 Glycosyl hydrolases family 2 DGM93_16915 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain DGM93_16915 PF02837 Glycosyl hydrolases family 2, sugar binding domain DGM93_16920 PF10566 Glycoside hydrolase 97 DGM93_16920 PF14508 Glycosyl-hydrolase 97 N-terminal DGM93_16920 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation DGM93_16925 PF00135 Carboxylesterase family DGM93_16930 PF00588 SpoU rRNA Methylase family DGM93_16930 PF08032 RNA 2'-O ribose methyltransferase substrate binding DGM93_16940 PF01433 Peptidase family M1 domain DGM93_16940 PF11838 ERAP1-like C-terminal domain DGM93_16945 PF00873 AcrB/AcrD/AcrF family DGM93_16950 PF00529 HlyD membrane-fusion protein of T1SS DGM93_16950 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DGM93_16955 PF00009 Elongation factor Tu GTP binding domain DGM93_16960 PF01507 Phosphoadenosine phosphosulfate reductase family DGM93_16965 PF00258 Flavodoxin DGM93_16965 PF00175 Oxidoreductase NAD-binding domain DGM93_16965 PF00667 FAD binding domain DGM93_16970 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DGM93_16970 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DGM93_16975 PF01507 Phosphoadenosine phosphosulfate reductase family DGM93_16995 PF01627 Hpt domain DGM93_16995 PF00512 His Kinase A (phospho-acceptor) domain DGM93_16995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM93_16995 PF00072 Response regulator receiver domain DGM93_17010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM93_17010 PF03466 LysR substrate binding domain DGM93_17015 PF14824 Sirohaem biosynthesis protein central DGM93_17015 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DGM93_17015 PF10414 Sirohaem synthase dimerisation region DGM93_17020 PF00291 Pyridoxal-phosphate dependent enzyme DGM93_17030 PF01661 Macro domain DGM93_17035 PF00274 Fructose-bisphosphate aldolase class-I DGM93_17045 PF00224 Pyruvate kinase, barrel domain DGM93_17045 PF02887 Pyruvate kinase, alpha/beta domain DGM93_17050 PF13419 Haloacid dehalogenase-like hydrolase DGM93_17055 PF00162 Phosphoglycerate kinase DGM93_17085 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DGM93_17085 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DGM93_17095 PF03922 OmpW family DGM93_17110 PF00753 Metallo-beta-lactamase superfamily DGM93_17110 PF04273 Putative phosphatase (DUF442) DGM93_17120 PF00528 Binding-protein-dependent transport system inner membrane component DGM93_17125 PF00005 ABC transporter DGM93_17125 PF03459 TOBE domain DGM93_17145 PF00512 His Kinase A (phospho-acceptor) domain DGM93_17145 PF08521 Two-component sensor kinase N-terminal DGM93_17145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM93_17150 PF00072 Response regulator receiver domain DGM93_17150 PF00486 Transcriptional regulatory protein, C terminal DGM93_17170 PF00501 AMP-binding enzyme DGM93_17195 PF01476 LysM domain DGM93_17195 PF03734 L,D-transpeptidase catalytic domain DGM93_17200 PF01551 Peptidase family M23 DGM93_17200 PF04225 Opacity-associated protein A LysM-like domain DGM93_17205 PF07715 TonB-dependent Receptor Plug Domain DGM93_17205 PF00593 TonB dependent receptor DGM93_17220 PF02780 Transketolase, C-terminal domain DGM93_17220 PF02779 Transketolase, pyrimidine binding domain DGM93_17220 PF00456 Transketolase, thiamine diphosphate binding domain DGM93_17225 PF00375 Sodium:dicarboxylate symporter family DGM93_17235 PF00092 von Willebrand factor type A domain DGM93_17235 PF07584 Aerotolerance regulator N-terminal DGM93_17255 PF07726 ATPase family associated with various cellular activities (AAA) DGM93_17255 PF17863 AAA lid domain DGM93_17260 PF11741 AMIN domain DGM93_17260 PF00263 Bacterial type II and III secretion system protein DGM93_17260 PF03958 Bacterial type II/III secretion system short domain DGM93_17260 PF07660 Secretin and TonB N terminus short domain DGM93_17265 PF04351 Pilus assembly protein, PilP DGM93_17270 PF04350 Pilus assembly protein, PilO DGM93_17275 PF05137 Fimbrial assembly protein (PilN) DGM93_17280 PF11104 Type IV pilus assembly protein PilM; DGM93_17285 PF00912 Transglycosylase DGM93_17285 PF00905 Penicillin binding protein transpeptidase domain DGM93_17285 PF17092 Penicillin-binding protein OB-like domain DGM93_17295 PF00285 Citrate synthase, C-terminal domain DGM93_17300 PF01197 Ribosomal protein L31 DGM93_17305 PF01156 Inosine-uridine preferring nucleoside hydrolase DGM93_17310 PF00271 Helicase conserved C-terminal domain DGM93_17310 PF17191 RecG wedge domain DGM93_17310 PF00270 DEAD/DEAH box helicase DGM93_17315 PF01042 Endoribonuclease L-PSP DGM93_17320 PF02824 TGS domain DGM93_17320 PF04607 Region found in RelA / SpoT proteins DGM93_17320 PF13291 ACT domain DGM93_17325 PF01192 RNA polymerase Rpb6 DGM93_17330 PF00625 Guanylate kinase DGM93_17335 PF03755 YicC-like family, N-terminal region DGM93_17335 PF08340 Domain of unknown function (DUF1732) DGM93_17340 PF03725 3' exoribonuclease family, domain 2 DGM93_17340 PF01138 3' exoribonuclease family, domain 1 DGM93_17350 PF01725 Ham1 family DGM93_17355 PF06969 HemN C-terminal domain DGM93_17355 PF04055 Radical SAM superfamily DGM93_17370 PF00557 Metallopeptidase family M24 DGM93_17380 PF00557 Metallopeptidase family M24 DGM93_17380 PF05195 Aminopeptidase P, N-terminal domain DGM93_17385 PF03695 Uncharacterised protein family (UPF0149) DGM93_17395 PF05164 Cell division protein ZapA DGM93_17405 PF01812 5-formyltetrahydrofolate cyclo-ligase family DGM93_17415 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DGM93_17425 PF13369 Transglutaminase-like superfamily DGM93_17435 PF00301 Rubredoxin DGM93_17440 PF02581 Thiamine monophosphate synthase DGM93_17475 PF00202 Aminotransferase class-III DGM93_17480 PF00196 Bacterial regulatory proteins, luxR family DGM93_17480 PF17874 MalT-like TPR region DGM93_17485 PF00127 Copper binding proteins, plastocyanin/azurin family DGM93_17490 PF00155 Aminotransferase class I and II DGM93_17500 PF00034 Cytochrome c DGM93_17500 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DGM93_17505 PF01593 Flavin containing amine oxidoreductase DGM93_17520 PF00202 Aminotransferase class-III DGM93_17525 PF00520 Ion transport protein DGM93_17525 PF00027 Cyclic nucleotide-binding domain DGM93_17540 PF01569 PAP2 superfamily DGM93_17550 PF01062 Bestrophin, RFP-TM, chloride channel DGM93_17560 PF02875 Mur ligase family, glutamate ligase domain DGM93_17560 PF08245 Mur ligase middle domain DGM93_17560 PF01225 Mur ligase family, catalytic domain DGM93_17570 PF00365 Phosphofructokinase DGM93_17580 PF03030 Inorganic H+ pyrophosphatase DGM93_17590 PF00719 Inorganic pyrophosphatase DGM93_17600 PF07715 TonB-dependent Receptor Plug Domain DGM93_17600 PF00593 TonB dependent receptor DGM93_17605 PF00872 Transposase, Mutator family DGM93_17615 PF13667 ThiC-associated domain DGM93_17615 PF01964 Radical SAM ThiC family DGM93_17625 PF07715 TonB-dependent Receptor Plug Domain DGM93_17625 PF00593 TonB dependent receptor DGM93_17630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGM93_17630 PF02203 Tar ligand binding domain homologue DGM93_17630 PF00672 HAMP domain DGM93_17640 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DGM93_17640 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DGM93_17645 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DGM93_17645 PF00205 Thiamine pyrophosphate enzyme, central domain DGM93_17645 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DGM93_17655 PF00291 Pyridoxal-phosphate dependent enzyme DGM93_17660 PF08502 LeuA allosteric (dimerisation) domain DGM93_17660 PF00682 HMGL-like DGM93_17670 PF00180 Isocitrate/isopropylmalate dehydrogenase DGM93_17675 PF00694 Aconitase C-terminal domain DGM93_17680 PF00330 Aconitase family (aconitate hydratase) DGM93_17685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM93_17705 PF02321 Outer membrane efflux protein DGM93_17710 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) DGM93_17715 PF03279 Bacterial lipid A biosynthesis acyltransferase DGM93_17740 PF00390 Malic enzyme, N-terminal domain DGM93_17740 PF03949 Malic enzyme, NAD binding domain DGM93_17740 PF01515 Phosphate acetyl/butaryl transferase DGM93_17745 PF00375 Sodium:dicarboxylate symporter family DGM93_17755 PF02743 Cache domain DGM93_17755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM93_17755 PF00512 His Kinase A (phospho-acceptor) domain DGM93_17760 PF07690 Major Facilitator Superfamily DGM93_17770 PF03466 LysR substrate binding domain DGM93_17770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM93_17775 PF00248 Aldo/keto reductase family DGM93_17790 PF00196 Bacterial regulatory proteins, luxR family DGM93_17790 PF00072 Response regulator receiver domain DGM93_17805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM93_17805 PF00512 His Kinase A (phospho-acceptor) domain DGM93_17805 PF08521 Two-component sensor kinase N-terminal DGM93_17810 PF00072 Response regulator receiver domain DGM93_17810 PF00486 Transcriptional regulatory protein, C terminal DGM93_17825 PF03600 Citrate transporter DGM93_17830 PF00106 short chain dehydrogenase DGM93_17835 PF00356 Bacterial regulatory proteins, lacI family DGM93_17850 PF00128 Alpha amylase, catalytic domain DGM93_17865 PF03193 RsgA GTPase DGM93_17870 PF00155 Aminotransferase class I and II DGM93_17885 PF01522 Polysaccharide deacetylase DGM93_17890 PF00462 Glutaredoxin DGM93_17905 PF01979 Amidohydrolase family DGM93_17910 PF01979 Amidohydrolase family DGM93_17940 PF00872 Transposase, Mutator family DGM93_17950 PF00171 Aldehyde dehydrogenase family DGM93_17955 PF02028 BCCT, betaine/carnitine/choline family transporter DGM93_17965 PF01323 DSBA-like thioredoxin domain DGM93_17975 PF00034 Cytochrome c DGM93_17980 PF01926 50S ribosome-binding GTPase DGM93_17990 PF04107 Glutamate-cysteine ligase family 2(GCS2) DGM93_17995 PF00512 His Kinase A (phospho-acceptor) domain DGM93_17995 PF00672 HAMP domain DGM93_17995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM93_18000 PF00072 Response regulator receiver domain DGM93_18000 PF00486 Transcriptional regulatory protein, C terminal DGM93_18015 PF02583 Metal-sensitive transcriptional repressor DGM93_18020 PF00107 Zinc-binding dehydrogenase DGM93_18020 PF08240 Alcohol dehydrogenase GroES-like domain DGM93_18025 PF04828 Glutathione-dependent formaldehyde-activating enzyme DGM93_18030 PF00756 Putative esterase DGM93_18045 PF02645 Uncharacterised protein, DegV family COG1307 DGM93_18060 PF00872 Transposase, Mutator family DGM93_18070 PF00544 Pectate lyase DGM93_18085 PF01066 CDP-alcohol phosphatidyltransferase DGM93_18095 PF04073 Aminoacyl-tRNA editing domain DGM93_18095 PF03129 Anticodon binding domain DGM93_18095 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DGM93_18100 PF00816 H-NS histone family DGM93_18110 PF02405 Permease MlaE DGM93_18115 PF00005 ABC transporter DGM93_18120 PF03886 ABC-type transport auxiliary lipoprotein component DGM93_18120 PF02470 MlaD protein DGM93_18140 PF01144 Coenzyme A transferase DGM93_18145 PF01144 Coenzyme A transferase DGM93_18150 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DGM93_18150 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DGM93_18150 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DGM93_18150 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DGM93_18155 PF01050 Mannose-6-phosphate isomerase DGM93_18155 PF00483 Nucleotidyl transferase DGM93_18160 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DGM93_18160 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DGM93_18160 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DGM93_18165 PF04321 RmlD substrate binding domain DGM93_18170 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DGM93_18175 PF00483 Nucleotidyl transferase DGM93_18180 PF16363 GDP-mannose 4,6 dehydratase DGM93_18185 PF01012 Electron transfer flavoprotein domain DGM93_18190 PF01012 Electron transfer flavoprotein domain DGM93_18190 PF00766 Electron transfer flavoprotein FAD-binding domain DGM93_18200 PF01040 UbiA prenyltransferase family DGM93_18205 PF04030 D-arabinono-1,4-lactone oxidase DGM93_18205 PF01565 FAD binding domain DGM93_18210 PF00106 short chain dehydrogenase DGM93_18215 PF01370 NAD dependent epimerase/dehydratase family DGM93_18220 PF01593 Flavin containing amine oxidoreductase DGM93_18235 PF01370 NAD dependent epimerase/dehydratase family DGM93_18240 PF16363 GDP-mannose 4,6 dehydratase DGM93_18245 PF13477 Glycosyl transferase 4-like DGM93_18245 PF00534 Glycosyl transferases group 1 DGM93_18250 PF13847 Methyltransferase domain DGM93_18250 PF00069 Protein kinase domain DGM93_18255 PF00005 ABC transporter DGM93_18265 PF13439 Glycosyltransferase Family 4 DGM93_18265 PF00534 Glycosyl transferases group 1 DGM93_18275 PF01053 Cys/Met metabolism PLP-dependent enzyme DGM93_18280 PF00571 CBS domain DGM93_18280 PF00291 Pyridoxal-phosphate dependent enzyme DGM93_18300 PF00437 Type II/IV secretion system protein DGM93_18305 PF14497 Glutathione S-transferase, C-terminal domain DGM93_18305 PF02798 Glutathione S-transferase, N-terminal domain DGM93_18320 PF00271 Helicase conserved C-terminal domain DGM93_18320 PF00270 DEAD/DEAH box helicase DGM93_18325 PF01242 6-pyruvoyl tetrahydropterin synthase DGM93_18345 PF13185 GAF domain DGM93_18355 PF13419 Haloacid dehalogenase-like hydrolase DGM93_18360 PF00817 impB/mucB/samB family DGM93_18360 PF11799 impB/mucB/samB family C-terminal domain DGM93_18365 PF07977 FabA-like domain DGM93_18370 PF00109 Beta-ketoacyl synthase, N-terminal domain DGM93_18370 PF02801 Beta-ketoacyl synthase, C-terminal domain DGM93_18375 PF08239 Bacterial SH3 domain DGM93_18385 PF01432 Peptidase family M3 DGM93_18400 PF00394 Multicopper oxidase DGM93_18400 PF07732 Multicopper oxidase DGM93_18400 PF07731 Multicopper oxidase DGM93_18405 PF05275 Copper resistance protein B precursor (CopB) DGM93_18410 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DGM93_18435 PF01380 SIS domain DGM93_18440 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DGM93_18445 PF00005 ABC transporter DGM93_18450 PF12704 MacB-like periplasmic core domain DGM93_18450 PF02687 FtsX-like permease family DGM93_18450 PF00005 ABC transporter DGM93_18455 PF12704 MacB-like periplasmic core domain DGM93_18455 PF00005 ABC transporter DGM93_18455 PF02687 FtsX-like permease family DGM93_18465 PF00158 Sigma-54 interaction domain DGM93_18465 PF02954 Bacterial regulatory protein, Fis family DGM93_18465 PF00072 Response regulator receiver domain DGM93_18470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM93_18470 PF00512 His Kinase A (phospho-acceptor) domain DGM93_18475 PF00132 Bacterial transferase hexapeptide (six repeats) DGM93_18475 PF14602 Hexapeptide repeat of succinyl-transferase DGM93_18475 PF12804 MobA-like NTP transferase domain DGM93_18485 PF01817 Chorismate mutase type II DGM93_18490 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DGM93_18490 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DGM93_18495 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DGM93_18495 PF02874 ATP synthase alpha/beta family, beta-barrel domain DGM93_18500 PF00231 ATP synthase DGM93_18505 PF02874 ATP synthase alpha/beta family, beta-barrel domain DGM93_18505 PF00306 ATP synthase alpha/beta chain, C terminal domain DGM93_18505 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DGM93_18510 PF00213 ATP synthase delta (OSCP) subunit DGM93_18515 PF00430 ATP synthase B/B' CF(0) DGM93_18520 PF00137 ATP synthase subunit C DGM93_18525 PF00119 ATP synthase A chain DGM93_18545 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DGM93_18545 PF07992 Pyridine nucleotide-disulphide oxidoreductase DGM93_18555 PF02817 e3 binding domain DGM93_18555 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DGM93_18555 PF00364 Biotin-requiring enzyme DGM93_18590 PF03180 NLPA lipoprotein DGM93_18595 PF00528 Binding-protein-dependent transport system inner membrane component DGM93_18600 PF09383 NIL domain DGM93_18600 PF00005 ABC transporter DGM93_18605 PF00892 EamA-like transporter family DGM93_18610 PF04461 Protein of unknown function (DUF520) DGM93_18620 PF00072 Response regulator receiver domain DGM93_18620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM93_18620 PF00512 His Kinase A (phospho-acceptor) domain DGM93_18620 PF18415 Histidine kinase receptor ArcB trans-membrane domain DGM93_18620 PF01627 Hpt domain DGM93_18620 PF00989 PAS fold DGM93_18645 PF13419 Haloacid dehalogenase-like hydrolase DGM93_18650 PF00849 RNA pseudouridylate synthase DGM93_18650 PF01479 S4 domain DGM93_18655 PF08468 Methyltransferase small domain N-terminal DGM93_18655 PF05175 Methyltransferase small domain DGM93_18670 PF05598 Transposase domain (DUF772) DGM93_18670 PF01609 Transposase DDE domain DGM93_18680 PF00872 Transposase, Mutator family DGM93_18690 PF07995 Glucose / Sorbosone dehydrogenase DGM93_18700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM93_18700 PF00512 His Kinase A (phospho-acceptor) domain DGM93_18700 PF00989 PAS fold DGM93_18720 PF00842 Alanine racemase, C-terminal domain DGM93_18720 PF01168 Alanine racemase, N-terminal domain DGM93_18725 PF01266 FAD dependent oxidoreductase DGM93_18730 PF01037 Lrp/AsnC ligand binding domain DGM93_18740 PF01641 SelR domain DGM93_18750 PF01618 MotA/TolQ/ExbB proton channel family DGM93_18755 PF00691 OmpA family DGM93_18755 PF13677 Membrane MotB of proton-channel complex MotA/MotB DGM93_18780 PF01061 ABC-2 type transporter DGM93_18785 PF00005 ABC transporter DGM93_18790 PF00999 Sodium/hydrogen exchanger family DGM93_18800 PF02469 Fasciclin domain DGM93_18805 PF03167 Uracil DNA glycosylase superfamily DGM93_18815 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DGM93_18825 PF03466 LysR substrate binding domain DGM93_18825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM93_18830 PF03358 NADPH-dependent FMN reductase DGM93_18835 PF00248 Aldo/keto reductase family DGM93_18850 PF05649 Peptidase family M13 DGM93_18850 PF01431 Peptidase family M13 DGM93_18865 PF13520 Amino acid permease DGM93_18875 PF04397 LytTr DNA-binding domain DGM93_18875 PF00072 Response regulator receiver domain DGM93_18880 PF06580 Histidine kinase DGM93_18880 PF02743 Cache domain DGM93_18880 PF00672 HAMP domain DGM93_18880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM93_18900 PF05974 Domain of unknown function (DUF892) DGM93_18905 PF05067 Manganese containing catalase DGM93_18925 PF01339 CheB methylesterase DGM93_18925 PF01739 CheR methyltransferase, SAM binding domain DGM93_18925 PF03705 CheR methyltransferase, all-alpha domain DGM93_18925 PF08448 PAS fold DGM93_18940 PF00158 Sigma-54 interaction domain DGM93_18940 PF00072 Response regulator receiver domain DGM93_18940 PF02954 Bacterial regulatory protein, Fis family DGM93_18955 PF01654 Cytochrome bd terminal oxidase subunit I DGM93_18995 PF13823 Alcohol dehydrogenase GroES-associated DGM93_18995 PF08240 Alcohol dehydrogenase GroES-like domain DGM93_18995 PF00107 Zinc-binding dehydrogenase DGM93_19005 PF00872 Transposase, Mutator family DGM93_19025 PF01609 Transposase DDE domain DGM93_19025 PF05598 Transposase domain (DUF772) DGM93_19035 PF02534 Type IV secretory system Conjugative DNA transfer DGM93_19040 PF01098 Cell cycle protein DGM93_19045 PF00905 Penicillin binding protein transpeptidase domain DGM93_19045 PF03717 Penicillin-binding Protein dimerisation domain DGM93_19055 PF04085 rod shape-determining protein MreC DGM93_19065 PF00294 pfkB family carbohydrate kinase DGM93_19080 PF01590 GAF domain DGM93_19080 PF00158 Sigma-54 interaction domain DGM93_19080 PF02954 Bacterial regulatory protein, Fis family DGM93_19090 PF00107 Zinc-binding dehydrogenase DGM93_19090 PF08240 Alcohol dehydrogenase GroES-like domain DGM93_19105 PF00497 Bacterial extracellular solute-binding proteins, family 3 DGM93_19110 PF13360 PQQ-like domain DGM93_19130 PF11838 ERAP1-like C-terminal domain DGM93_19130 PF01433 Peptidase family M1 domain DGM93_19135 PF00563 EAL domain DGM93_19135 PF03707 Bacterial signalling protein N terminal repeat DGM93_19135 PF00990 Diguanylate cyclase, GGDEF domain DGM93_19140 PF01209 ubiE/COQ5 methyltransferase family DGM93_19150 PF13533 Biotin-lipoyl like DGM93_19155 PF13673 Acetyltransferase (GNAT) domain DGM93_19170 PF07724 AAA domain (Cdc48 subfamily) DGM93_19170 PF10431 C-terminal, D2-small domain, of ClpB protein DGM93_19170 PF00004 ATPase family associated with various cellular activities (AAA) DGM93_19175 PF00227 Proteasome subunit DGM93_19180 PF02899 Phage integrase, N-terminal SAM-like domain DGM93_19180 PF00589 Phage integrase family DGM93_19190 PF01678 Diaminopimelate epimerase DGM93_19200 PF04304 Protein of unknown function (DUF454) DGM93_19205 PF00326 Prolyl oligopeptidase family DGM93_19205 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain DGM93_19210 PF00155 Aminotransferase class I and II DGM93_19220 PF00326 Prolyl oligopeptidase family DGM93_19220 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain DGM93_19260 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DGM93_19260 PF03900 Porphobilinogen deaminase, C-terminal domain DGM93_19265 PF04397 LytTr DNA-binding domain DGM93_19265 PF00072 Response regulator receiver domain DGM93_19270 PF06580 Histidine kinase DGM93_19270 PF07694 5TMR of 5TMR-LYT DGM93_19280 PF13632 Glycosyl transferase family group 2 DGM93_19320 PF03797 Autotransporter beta-domain DGM93_19330 PF09456 RcsC Alpha-Beta-Loop (ABL) DGM93_19330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM93_19330 PF00072 Response regulator receiver domain DGM93_19330 PF00512 His Kinase A (phospho-acceptor) domain DGM93_19335 PF00872 Transposase, Mutator family DGM93_19350 PF00563 EAL domain DGM93_19350 PF00990 Diguanylate cyclase, GGDEF domain DGM93_19350 PF05231 MASE1 DGM93_19350 PF08447 PAS fold DGM93_19350 PF08448 PAS fold DGM93_19350 PF13426 PAS domain DGM93_19370 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DGM93_19370 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DGM93_19380 PF01204 Trehalase DGM93_19395 PF01544 CorA-like Mg2+ transporter protein DGM93_19405 PF00324 Amino acid permease DGM93_19430 PF00553 Cellulose binding domain DGM93_19430 PF00041 Fibronectin type III domain DGM93_19430 PF01341 Glycosyl hydrolases family 6 DGM93_19435 PF03330 Lytic transglycolase DGM93_19440 PF00892 EamA-like transporter family DGM93_19460 PF07992 Pyridine nucleotide-disulphide oxidoreductase DGM93_19465 PF02082 Transcriptional regulator DGM93_19470 PF00990 Diguanylate cyclase, GGDEF domain DGM93_19480 PF07759 Protein of unknown function (DUF1615) DGM93_19545 PF13409 Glutathione S-transferase, N-terminal domain DGM93_19555 PF00106 short chain dehydrogenase DGM93_19585 PF00106 short chain dehydrogenase DGM93_19600 PF00872 Transposase, Mutator family DGM93_19605 PF17831 Pyruvate dehydrogenase E1 component middle domain DGM93_19605 PF00456 Transketolase, thiamine diphosphate binding domain DGM93_19610 PF07745 Glycosyl hydrolase family 53 DGM93_19650 PF07729 FCD domain DGM93_19650 PF00392 Bacterial regulatory proteins, gntR family DGM93_19660 PF00698 Acyl transferase domain DGM93_19665 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase DGM93_19670 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG DGM93_19680 PF01039 Carboxyl transferase domain DGM93_19685 PF06857 Malonate decarboxylase delta subunit (MdcD) DGM93_19690 PF16957 Malonate decarboxylase, alpha subunit, transporter DGM93_19720 PF04264 YceI-like domain DGM93_19725 PF00881 Nitroreductase family DGM93_19745 PF05598 Transposase domain (DUF772) DGM93_19745 PF01609 Transposase DDE domain DGM93_19765 PF02592 Putative vitamin uptake transporter DGM93_19770 PF03710 Glutamate-ammonia ligase adenylyltransferase DGM93_19770 PF08335 GlnD PII-uridylyltransferase DGM93_19780 PF08450 SMP-30/Gluconolactonase/LRE-like region DGM93_19795 PF00793 DAHP synthetase I family DGM93_19800 PF07804 HipA-like C-terminal domain DGM93_19805 PF07715 TonB-dependent Receptor Plug Domain DGM93_19805 PF00593 TonB dependent receptor DGM93_19815 PF00118 TCP-1/cpn60 chaperonin family DGM93_19820 PF00166 Chaperonin 10 Kd subunit DGM93_19835 PF03091 CutA1 divalent ion tolerance protein DGM93_19840 PF11412 Disulphide bond corrector protein DsbC DGM93_19840 PF02683 Cytochrome C biogenesis protein transmembrane region DGM93_19845 PF01220 Dehydroquinase class II DGM93_19850 PF00364 Biotin-requiring enzyme DGM93_19860 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DGM93_19860 PF02785 Biotin carboxylase C-terminal domain DGM93_19860 PF00289 Biotin carboxylase, N-terminal domain DGM93_19890 PF01381 Helix-turn-helix DGM93_19905 PF02954 Bacterial regulatory protein, Fis family DGM93_19935 PF00782 Dual specificity phosphatase, catalytic domain DGM93_19940 PF12147 Putative methyltransferase DGM93_19940 PF12146 Serine aminopeptidase, S33 DGM93_19945 PF01066 CDP-alcohol phosphatidyltransferase DGM93_19950 PF01808 AICARFT/IMPCHase bienzyme DGM93_19950 PF02142 MGS-like domain DGM93_19960 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DGM93_19960 PF02843 Phosphoribosylglycinamide synthetase, C domain DGM93_19960 PF02844 Phosphoribosylglycinamide synthetase, N domain DGM93_19970 PF12805 FUSC-like inner membrane protein yccS DGM93_19975 PF07690 Major Facilitator Superfamily DGM93_19980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM93_19980 PF03466 LysR substrate binding domain DGM93_19985 PF07690 Major Facilitator Superfamily DGM93_20000 PF03186 CobD/Cbib protein DGM93_20000 PF17113 Regulatory signalling modulator protein AmpE DGM93_20005 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain DGM93_20005 PF09297 NADH pyrophosphatase zinc ribbon domain DGM93_20005 PF00293 NUDIX domain DGM93_20015 PF01521 Iron-sulphur cluster biosynthesis DGM93_20035 PF00072 Response regulator receiver domain DGM93_20035 PF00486 Transcriptional regulatory protein, C terminal DGM93_20040 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DGM93_20040 PF01627 Hpt domain DGM93_20040 PF00072 Response regulator receiver domain DGM93_20040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM93_20040 PF00672 HAMP domain DGM93_20040 PF00512 His Kinase A (phospho-acceptor) domain DGM93_20045 PF00210 Ferritin-like domain DGM93_20055 PF00293 NUDIX domain DGM93_20070 PF00380 Ribosomal protein S9/S16 DGM93_20075 PF00572 Ribosomal protein L13 DGM93_20080 PF03232 Ubiquinone biosynthesis protein COQ7 DGM93_20085 PF00893 Small Multidrug Resistance protein DGM93_20090 PF02675 S-adenosylmethionine decarboxylase DGM93_20095 PF00027 Cyclic nucleotide-binding domain DGM93_20095 PF00325 Bacterial regulatory proteins, crp family DGM93_20105 PF00218 Indole-3-glycerol phosphate synthase DGM93_20110 PF00591 Glycosyl transferase family, a/b domain DGM93_20110 PF02885 Glycosyl transferase family, helical bundle domain DGM93_20120 PF00117 Glutamine amidotransferase class-I DGM93_20130 PF04715 Anthranilate synthase component I, N terminal region DGM93_20130 PF00425 chorismate binding enzyme DGM93_20135 PF00781 Diacylglycerol kinase catalytic domain DGM93_20145 PF00834 Ribulose-phosphate 3 epimerase family DGM93_20155 PF00226 DnaJ domain DGM93_20155 PF05099 Tellurite resistance protein TerB DGM93_20160 PF01259 SAICAR synthetase DGM93_20180 PF00182 Chitinase class I DGM93_20185 PF02868 Thermolysin metallopeptidase, alpha-helical domain DGM93_20185 PF07504 Fungalysin/Thermolysin Propeptide Motif DGM93_20185 PF01483 Proprotein convertase P-domain DGM93_20185 PF01447 Thermolysin metallopeptidase, catalytic domain DGM93_20200 PF13244 Domain of unknown function (DUF4040) DGM93_20200 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter DGM93_20200 PF00361 Proton-conducting membrane transporter DGM93_20200 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DGM93_20205 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DGM93_20210 PF00361 Proton-conducting membrane transporter DGM93_20220 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) DGM93_20225 PF03334 Na+/H+ antiporter subunit DGM93_20245 PF04209 homogentisate 1,2-dioxygenase DGM93_20250 PF04480 Protein of unknown function (DUF559) DGM93_20255 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DGM93_20260 PF01047 MarR family DGM93_20270 PF00854 POT family DGM93_20275 PF03301 Tryptophan 2,3-dioxygenase DGM93_20285 PF00676 Dehydrogenase E1 component DGM93_20290 PF02779 Transketolase, pyrimidine binding domain DGM93_20290 PF02780 Transketolase, C-terminal domain DGM93_20300 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DGM93_20300 PF00364 Biotin-requiring enzyme DGM93_20305 PF00271 Helicase conserved C-terminal domain DGM93_20305 PF00270 DEAD/DEAH box helicase DGM93_20320 PF00873 AcrB/AcrD/AcrF family DGM93_20335 PF02321 Outer membrane efflux protein DGM93_20340 PF06903 VirK protein DGM93_20365 PF01609 Transposase DDE domain DGM93_20365 PF05598 Transposase domain (DUF772) DGM93_20375 PF00872 Transposase, Mutator family DGM93_20400 PF13460 NAD(P)H-binding DGM93_20405 PF00128 Alpha amylase, catalytic domain DGM93_20405 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DGM93_20415 PF00128 Alpha amylase, catalytic domain DGM93_20420 PF02446 4-alpha-glucanotransferase DGM93_20425 PF00128 Alpha amylase, catalytic domain DGM93_20425 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DGM93_20425 PF11941 Domain of unknown function (DUF3459) DGM93_20430 PF00128 Alpha amylase, catalytic domain DGM93_20430 PF02806 Alpha amylase, C-terminal all-beta domain DGM93_20430 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DGM93_20435 PF08323 Starch synthase catalytic domain DGM93_20435 PF00534 Glycosyl transferases group 1 DGM93_20440 PF00990 Diguanylate cyclase, GGDEF domain DGM93_20445 PF05661 Protein of unknown function (DUF808) DGM93_20450 PF03109 ABC1 family DGM93_20455 PF00884 Sulfatase DGM93_20460 PF12794 Mechanosensitive ion channel inner membrane domain 1 DGM93_20460 PF00924 Mechanosensitive ion channel DGM93_20460 PF12795 Mechanosensitive ion channel porin domain DGM93_20480 PF01464 Transglycosylase SLT domain DGM93_20490 PF00263 Bacterial type II and III secretion system protein DGM93_20490 PF03958 Bacterial type II/III secretion system short domain DGM93_20495 PF01311 Bacterial export proteins, family 1 DGM93_20505 PF18269 T3SS EscN ATPase C-terminal domain DGM93_20505 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DGM93_20505 PF02874 ATP synthase alpha/beta family, beta-barrel domain DGM93_20520 PF01514 Secretory protein of YscJ/FliF family DGM93_20535 PF01312 FlhB HrpN YscU SpaS Family DGM93_20540 PF00771 FHIPEP family DGM93_20555 PF00813 FliP family DGM93_20560 PF01313 Bacterial export proteins, family 3 DGM93_20605 PF05598 Transposase domain (DUF772) DGM93_20605 PF01609 Transposase DDE domain DGM93_20610 PF05819 NolX protein DGM93_20635 PF01040 UbiA prenyltransferase family DGM93_20645 PF04055 Radical SAM superfamily DGM93_20645 PF06968 Biotin and Thiamin Synthesis associated domain DGM93_20650 PF00155 Aminotransferase class I and II DGM93_20660 PF12697 Alpha/beta hydrolase family DGM93_20670 PF13649 Methyltransferase domain DGM93_20695 PF00291 Pyridoxal-phosphate dependent enzyme DGM93_20705 PF01134 Glucose inhibited division protein A DGM93_20705 PF13932 GidA associated domain DGM93_20715 PF07859 alpha/beta hydrolase fold DGM93_20725 PF09339 IclR helix-turn-helix domain DGM93_20725 PF01614 Bacterial transcriptional regulator DGM93_20735 PF02627 Carboxymuconolactone decarboxylase family DGM93_20740 PF12146 Serine aminopeptidase, S33 DGM93_20745 PF00206 Lyase DGM93_20745 PF10397 Adenylosuccinate lyase C-terminus DGM93_20755 PF00775 Dioxygenase DGM93_20755 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal DGM93_20760 PF02803 Thiolase, C-terminal domain DGM93_20760 PF00108 Thiolase, N-terminal domain DGM93_20770 PF01144 Coenzyme A transferase DGM93_20775 PF00355 Rieske [2Fe-2S] domain DGM93_20780 PF00970 Oxidoreductase FAD-binding domain DGM93_20780 PF00111 2Fe-2S iron-sulfur cluster binding domain DGM93_20785 PF00455 DeoR C terminal sensor domain DGM93_20785 PF08220 DeoR-like helix-turn-helix domain DGM93_20790 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DGM93_20790 PF01266 FAD dependent oxidoreductase DGM93_20795 PF00230 Major intrinsic protein DGM93_20800 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DGM93_20800 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DGM93_20810 PF00872 Transposase, Mutator family DGM93_20815 PF01494 FAD binding domain DGM93_20825 PF00171 Aldehyde dehydrogenase family DGM93_20845 PF11871 Domain of unknown function (DUF3391) DGM93_20845 PF01966 HD domain DGM93_20850 PF07690 Major Facilitator Superfamily DGM93_20860 PF00132 Bacterial transferase hexapeptide (six repeats) DGM93_20875 PF00920 Dehydratase family DGM93_20930 PF01638 HxlR-like helix-turn-helix DGM93_20935 PF05368 NmrA-like family DGM93_20955 PF03812 2-keto-3-deoxygluconate permease DGM93_20960 PF01717 Cobalamin-independent synthase, Catalytic domain DGM93_20960 PF08267 Cobalamin-independent synthase, N-terminal domain DGM93_20970 PF03358 NADPH-dependent FMN reductase DGM93_20975 PF03466 LysR substrate binding domain DGM93_20975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM93_20980 PF02677 Epoxyqueuosine reductase QueH DGM93_20995 PF08139 Prokaryotic membrane lipoprotein lipid attachment site DGM93_20995 PF02321 Outer membrane efflux protein DGM93_21000 PF00873 AcrB/AcrD/AcrF family DGM93_21005 PF00529 HlyD membrane-fusion protein of T1SS DGM93_21005 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DGM93_21010 PF00672 HAMP domain DGM93_21010 PF00512 His Kinase A (phospho-acceptor) domain DGM93_21010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM93_21015 PF00486 Transcriptional regulatory protein, C terminal DGM93_21015 PF00072 Response regulator receiver domain DGM93_21020 PF00551 Formyl transferase DGM93_21030 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DGM93_21030 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DGM93_21035 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DGM93_21040 PF02146 Sir2 family DGM93_21045 PF00561 alpha/beta hydrolase fold DGM93_21055 PF07690 Major Facilitator Superfamily DGM93_21060 PF03466 LysR substrate binding domain DGM93_21060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM93_21075 PF01026 TatD related DNase DGM93_21080 PF03466 LysR substrate binding domain DGM93_21080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM93_21085 PF00355 Rieske [2Fe-2S] domain DGM93_21090 PF00111 2Fe-2S iron-sulfur cluster binding domain DGM93_21100 PF00860 Permease family DGM93_21110 PF01156 Inosine-uridine preferring nucleoside hydrolase DGM93_21120 PF01425 Amidase DGM93_21135 PF00561 alpha/beta hydrolase fold DGM93_21140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM93_21140 PF03466 LysR substrate binding domain DGM93_21145 PF01546 Peptidase family M20/M25/M40 DGM93_21145 PF07687 Peptidase dimerisation domain DGM93_21150 PF00266 Aminotransferase class-V DGM93_21165 PF09349 OHCU decarboxylase DGM93_21165 PF01014 Uricase DGM93_21170 PF13454 FAD-NAD(P)-binding DGM93_21175 PF00576 HIUase/Transthyretin family DGM93_21180 PF07308 Protein of unknown function (DUF1456) DGM93_21195 PF08482 ATP-dependent helicase C-terminal DGM93_21195 PF00271 Helicase conserved C-terminal domain DGM93_21195 PF04408 Helicase associated domain (HA2) DGM93_21195 PF00270 DEAD/DEAH box helicase DGM93_21205 PF00849 RNA pseudouridylate synthase DGM93_21215 PF00248 Aldo/keto reductase family DGM93_21220 PF16884 N-terminal domain of oxidoreductase DGM93_21220 PF00107 Zinc-binding dehydrogenase DGM93_21240 PF02566 OsmC-like protein DGM93_21245 PF01047 MarR family DGM93_21250 PF03969 AFG1-like ATPase DGM93_21270 PF07683 Cobalamin synthesis protein cobW C-terminal domain DGM93_21270 PF02492 CobW/HypB/UreG, nucleotide-binding domain DGM93_21325 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DGM93_21325 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DGM93_21325 PF02770 Acyl-CoA dehydrogenase, middle domain DGM93_21330 PF01039 Carboxyl transferase domain DGM93_21335 PF02785 Biotin carboxylase C-terminal domain DGM93_21335 PF00289 Biotin carboxylase, N-terminal domain DGM93_21335 PF00364 Biotin-requiring enzyme DGM93_21335 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DGM93_21335 PF18140 Propionyl-coenzyme A carboxylase BT domain DGM93_21340 PF00326 Prolyl oligopeptidase family DGM93_21350 PF00872 Transposase, Mutator family DGM93_21365 PF01609 Transposase DDE domain DGM93_21365 PF05598 Transposase domain (DUF772) DGM93_21380 PF00990 Diguanylate cyclase, GGDEF domain DGM93_21385 PF00463 Isocitrate lyase family DGM93_21390 PF01274 Malate synthase DGM93_21395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM93_21395 PF03466 LysR substrate binding domain DGM93_21400 PF00999 Sodium/hydrogen exchanger family DGM93_21405 PF12833 Helix-turn-helix domain DGM93_21430 PF12706 Beta-lactamase superfamily domain DGM93_21435 PF01432 Peptidase family M3 DGM93_21440 PF01112 Asparaginase DGM93_21450 PF00472 RF-1 domain DGM93_21470 PF00849 RNA pseudouridylate synthase DGM93_21480 PF03109 ABC1 family DGM93_21495 PF07478 D-ala D-ala ligase C-terminus DGM93_21495 PF01820 D-ala D-ala ligase N-terminus DGM93_21510 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family DGM93_21515 PF00501 AMP-binding enzyme DGM93_21520 PF03692 Putative zinc- or iron-chelating domain DGM93_21525 PF00561 alpha/beta hydrolase fold DGM93_21530 PF02661 Fic/DOC family DGM93_21530 PF13784 Fic/DOC family N-terminal DGM93_21535 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DGM93_21535 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DGM93_21550 PF00588 SpoU rRNA Methylase family DGM93_21555 PF07690 Major Facilitator Superfamily DGM93_21570 PF02954 Bacterial regulatory protein, Fis family DGM93_21570 PF00072 Response regulator receiver domain DGM93_21570 PF00158 Sigma-54 interaction domain DGM93_21575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM93_21610 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DGM93_21610 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DGM93_21615 PF02556 Preprotein translocase subunit SecB DGM93_21620 PF00581 Rhodanese-like domain DGM93_21660 PF00108 Thiolase, N-terminal domain DGM93_21660 PF02803 Thiolase, C-terminal domain DGM93_21675 PF00080 Copper/zinc superoxide dismutase (SODC) DGM93_21680 PF00080 Copper/zinc superoxide dismutase (SODC) DGM93_21685 PF00158 Sigma-54 interaction domain DGM93_21685 PF00072 Response regulator receiver domain DGM93_21685 PF02954 Bacterial regulatory protein, Fis family DGM93_21690 PF00512 His Kinase A (phospho-acceptor) domain DGM93_21690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM93_21690 PF00989 PAS fold DGM93_21695 PF00909 Ammonium Transporter Family DGM93_21700 PF00543 Nitrogen regulatory protein P-II DGM93_21705 PF03951 Glutamine synthetase, beta-Grasp domain DGM93_21705 PF00120 Glutamine synthetase, catalytic domain DGM93_21715 PF02673 Bacitracin resistance protein BacA DGM93_21750 PF03061 Thioesterase superfamily DGM93_21760 PF13091 PLD-like domain DGM93_21775 PF10609 NUBPL iron-transfer P-loop NTPase DGM93_21775 PF01883 Iron-sulfur cluster assembly protein DGM93_21805 PF12867 DinB superfamily DGM93_21805 PF03781 Sulfatase-modifying factor enzyme 1 DGM93_21815 PF00528 Binding-protein-dependent transport system inner membrane component DGM93_21820 PF00005 ABC transporter DGM93_21820 PF00571 CBS domain DGM93_21835 PF00005 ABC transporter DGM93_21845 PF01734 Patatin-like phospholipase DGM93_21850 PF07715 TonB-dependent Receptor Plug Domain DGM93_21850 PF07660 Secretin and TonB N terminus short domain DGM93_21850 PF00593 TonB dependent receptor DGM93_21855 PF01037 Lrp/AsnC ligand binding domain DGM93_21860 PF00351 Biopterin-dependent aromatic amino acid hydroxylase DGM93_21870 PF00657 GDSL-like Lipase/Acylhydrolase DGM93_21885 PF04962 KduI/IolB family DGM93_21890 PF00356 Bacterial regulatory proteins, lacI family DGM93_21895 PF04616 Glycosyl hydrolases family 43 DGM93_21895 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain DGM93_21900 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DGM93_21910 PF03480 Bacterial extracellular solute-binding protein, family 7 DGM93_21920 PF07859 alpha/beta hydrolase fold DGM93_21920 PF13472 GDSL-like Lipase/Acylhydrolase family DGM93_21925 PF00135 Carboxylesterase family DGM93_21930 PF00248 Aldo/keto reductase family DGM93_21940 PF02806 Alpha amylase, C-terminal all-beta domain DGM93_21940 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DGM93_21940 PF00128 Alpha amylase, catalytic domain DGM93_21945 PF00128 Alpha amylase, catalytic domain DGM93_21945 PF16657 Maltogenic Amylase, C-terminal domain DGM93_21950 PF11896 Domain of unknown function (DUF3416) DGM93_21950 PF00128 Alpha amylase, catalytic domain DGM93_21965 PF05598 Transposase domain (DUF772) DGM93_21965 PF01609 Transposase DDE domain DGM93_21970 PF01609 Transposase DDE domain DGM93_21970 PF05598 Transposase domain (DUF772) DGM93_21975 PF05598 Transposase domain (DUF772) DGM93_21975 PF01609 Transposase DDE domain DGM93_21995 PF00872 Transposase, Mutator family DGM93_22050 PF00294 pfkB family carbohydrate kinase DGM93_22060 PF07055 Enoyl reductase FAD binding domain DGM93_22060 PF12241 Trans-2-enoyl-CoA reductase catalytic region DGM93_22060 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase DGM93_22090 PF00196 Bacterial regulatory proteins, luxR family DGM93_22090 PF00072 Response regulator receiver domain DGM93_22095 PF07730 Histidine kinase DGM93_22100 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family DGM93_22105 PF01070 FMN-dependent dehydrogenase DGM93_22110 PF02735 Ku70/Ku80 beta-barrel domain DGM93_22135 PF00593 TonB dependent receptor DGM93_22135 PF07715 TonB-dependent Receptor Plug Domain DGM93_22140 PF00155 Aminotransferase class I and II DGM93_22145 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain DGM93_22190 PF07726 ATPase family associated with various cellular activities (AAA) DGM93_22190 PF17863 AAA lid domain DGM93_22230 PF00083 Sugar (and other) transporter DGM93_22230 PF08946 Osmosensory transporter coiled coil DGM93_22240 PF00085 Thioredoxin DGM93_22255 PF00293 NUDIX domain DGM93_22255 PF13344 Haloacid dehalogenase-like hydrolase DGM93_22265 PF02868 Thermolysin metallopeptidase, alpha-helical domain DGM93_22265 PF16485 Protealysin propeptide DGM93_22265 PF01447 Thermolysin metallopeptidase, catalytic domain DGM93_22285 PF05532 CsbD-like DGM93_22290 PF05598 Transposase domain (DUF772) DGM93_22290 PF01609 Transposase DDE domain DGM93_22305 PF05598 Transposase domain (DUF772) DGM93_22305 PF01609 Transposase DDE domain DGM93_22320 PF02525 Flavodoxin-like fold DGM93_22355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM93_22355 PF03466 LysR substrate binding domain DGM93_22365 PF00106 short chain dehydrogenase DGM93_22385 PF03006 Haemolysin-III related DGM93_22390 PF09369 Domain of unknown function (DUF1998) DGM93_22390 PF00271 Helicase conserved C-terminal domain DGM93_22390 PF00270 DEAD/DEAH box helicase DGM93_22455 PF03466 LysR substrate binding domain DGM93_22455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM93_22480 PF01645 Conserved region in glutamate synthase DGM93_22480 PF04898 Glutamate synthase central domain DGM93_22480 PF00310 Glutamine amidotransferases class-II DGM93_22480 PF01493 GXGXG motif DGM93_22485 PF07992 Pyridine nucleotide-disulphide oxidoreductase DGM93_22485 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DGM93_22500 PF00107 Zinc-binding dehydrogenase DGM93_22500 PF08240 Alcohol dehydrogenase GroES-like domain DGM93_22510 PF00150 Cellulase (glycosyl hydrolase family 5) DGM93_22520 PF00150 Cellulase (glycosyl hydrolase family 5) DGM93_22525 PF00150 Cellulase (glycosyl hydrolase family 5) DGM93_22535 PF04389 Peptidase family M28 DGM93_22545 PF01551 Peptidase family M23 DGM93_22550 PF13180 PDZ domain DGM93_22550 PF03572 Peptidase family S41 DGM93_22555 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DGM93_22555 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DGM93_22570 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) DGM93_22580 PF04055 Radical SAM superfamily DGM93_22595 PF13396 Phospholipase_D-nuclease N-terminal DGM93_22595 PF13091 PLD-like domain DGM93_22605 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ DGM93_22635 PF00872 Transposase, Mutator family DGM93_22645 PF08463 EcoEI R protein C-terminal DGM93_22645 PF00271 Helicase conserved C-terminal domain DGM93_22645 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) DGM93_22645 PF04851 Type III restriction enzyme, res subunit DGM93_22650 PF00239 Resolvase, N terminal domain DGM93_22650 PF02796 Helix-turn-helix domain of resolvase DGM93_22725 PF01425 Amidase DGM93_22730 PF02785 Biotin carboxylase C-terminal domain DGM93_22730 PF00289 Biotin carboxylase, N-terminal domain DGM93_22730 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DGM93_22780 PF00255 Glutathione peroxidase DGM93_22790 PF02646 RmuC family DGM93_22795 PF08240 Alcohol dehydrogenase GroES-like domain DGM93_22795 PF00107 Zinc-binding dehydrogenase DGM93_22800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM93_22800 PF03466 LysR substrate binding domain DGM93_22820 PF13520 Amino acid permease DGM93_22840 PF10947 Protein of unknown function (DUF2628) DGM93_22845 PF00990 Diguanylate cyclase, GGDEF domain DGM93_22850 PF13556 PucR C-terminal helix-turn-helix domain DGM93_22850 PF17853 GGDEF-like domain DGM93_22850 PF05651 Putative sugar diacid recognition DGM93_22855 PF02595 Glycerate kinase family DGM93_22875 PF17785 PUA-like domain DGM93_22875 PF10672 S-adenosylmethionine-dependent methyltransferase DGM93_22885 PF03741 Integral membrane protein TerC family DGM93_22900 PF01694 Rhomboid family DGM93_22905 PF03009 Glycerophosphoryl diester phosphodiesterase family DGM93_22915 PF01569 PAP2 superfamily DGM93_22920 PF10396 GTP-binding protein TrmE N-terminus DGM93_22920 PF01926 50S ribosome-binding GTPase DGM93_22920 PF12631 MnmE helical domain DGM93_22925 PF01522 Polysaccharide deacetylase DGM93_22930 PF02096 60Kd inner membrane protein DGM93_22930 PF14849 YidC periplasmic domain DGM93_22935 PF00825 Ribonuclease P DGM93_22940 PF00468 Ribosomal protein L34 DGM93_22990 PF12950 TaqI-like C-terminal specificity domain DGM93_22990 PF07669 Eco57I restriction-modification methylase DGM93_22995 PF06616 BsuBI/PstI restriction endonuclease domain DGM93_22995 PF17728 BsuBI/PstI restriction endonuclease HTH domain DGM93_23070 PF00872 Transposase, Mutator family DGM93_23115 PF02796 Helix-turn-helix domain of resolvase DGM93_23115 PF00239 Resolvase, N terminal domain DGM93_23125 PF01850 PIN domain DGM93_23180 PF03743 Bacterial conjugation TrbI-like protein DGM93_23195 PF04610 TrbL/VirB6 plasmid conjugal transfer protein DGM93_23205 PF03135 CagE, TrbE, VirB family, component of type IV transporter system DGM93_23220 PF00437 Type II/IV secretion system protein DGM93_23260 PF02534 Type IV secretory system Conjugative DNA transfer DGM93_23330 PF06067 Domain of unknown function (DUF932) DGM93_23340 PF00872 Transposase, Mutator family DGM93_23360 PF18495 Antitoxin VbhA DGM93_23370 PF17841 BID domain of Bartonella effector protein (Bep) DGM93_23370 PF02661 Fic/DOC family DGM93_23380 PF01609 Transposase DDE domain DGM93_23380 PF05598 Transposase domain (DUF772) DGM93_23415 PF03230 Antirestriction protein DGM93_23450 PF07057 DNA helicase TraI DGM93_23450 PF18272 single-stranded DNA binding TraI N-terminal subdomain DGM93_23450 PF08751 TrwC relaxase DGM93_23450 PF18340 DNA relaxase TraI 2B/2B-like domain DGM93_23450 PF08751 TrwC relaxase DGM93_23450 PF18272 single-stranded DNA binding TraI N-terminal subdomain DGM93_23450 PF07057 DNA helicase TraI DGM93_23450 PF18340 DNA relaxase TraI 2B/2B-like domain DGM93_23460 PF00872 Transposase, Mutator family DGM93_23485 PF02796 Helix-turn-helix domain of resolvase DGM93_23485 PF00239 Resolvase, N terminal domain DGM93_23495 PF01555 DNA methylase DGM93_23500 PF09571 XcyI restriction endonuclease DGM93_23570 PF00239 Resolvase, N terminal domain DGM93_23570 PF02796 Helix-turn-helix domain of resolvase DGM93_23580 PF01850 PIN domain DGM93_23595 PF11740 Plasmid replication region DNA-binding N-term DGM93_23625 PF03377 TAL effector repeat