locus-tag class description DGM85_00010 PF00308 Bacterial dnaA protein DGM85_00010 PF08299 Bacterial dnaA protein helix-turn-helix DGM85_00010 PF11638 DnaA N-terminal domain DGM85_00015 PF00712 DNA polymerase III beta subunit, N-terminal domain DGM85_00015 PF02767 DNA polymerase III beta subunit, central domain DGM85_00015 PF02768 DNA polymerase III beta subunit, C-terminal domain DGM85_00020 PF02463 RecF/RecN/SMC N terminal domain DGM85_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM85_00025 PF18053 DNA gyrase B subunit insert domain DGM85_00025 PF01751 Toprim domain DGM85_00025 PF00204 DNA gyrase B DGM85_00025 PF00986 DNA gyrase B subunit, carboxyl terminus DGM85_00035 PF01435 Peptidase family M48 DGM85_00045 PF03544 Gram-negative bacterial TonB protein C-terminal DGM85_00050 PF01618 MotA/TolQ/ExbB proton channel family DGM85_00055 PF02472 Biopolymer transport protein ExbD/TolR DGM85_00060 PF02472 Biopolymer transport protein ExbD/TolR DGM85_00100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM85_00100 PF03466 LysR substrate binding domain DGM85_00110 PF00106 short chain dehydrogenase DGM85_00130 PF03006 Haemolysin-III related DGM85_00135 PF00271 Helicase conserved C-terminal domain DGM85_00135 PF00270 DEAD/DEAH box helicase DGM85_00135 PF09369 Domain of unknown function (DUF1998) DGM85_00200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM85_00200 PF03466 LysR substrate binding domain DGM85_00225 PF01493 GXGXG motif DGM85_00225 PF00310 Glutamine amidotransferases class-II DGM85_00225 PF04898 Glutamate synthase central domain DGM85_00225 PF01645 Conserved region in glutamate synthase DGM85_00230 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DGM85_00230 PF07992 Pyridine nucleotide-disulphide oxidoreductase DGM85_00245 PF00107 Zinc-binding dehydrogenase DGM85_00245 PF08240 Alcohol dehydrogenase GroES-like domain DGM85_00255 PF00150 Cellulase (glycosyl hydrolase family 5) DGM85_00265 PF00150 Cellulase (glycosyl hydrolase family 5) DGM85_00270 PF00150 Cellulase (glycosyl hydrolase family 5) DGM85_00280 PF04389 Peptidase family M28 DGM85_00290 PF01551 Peptidase family M23 DGM85_00295 PF13180 PDZ domain DGM85_00295 PF03572 Peptidase family S41 DGM85_00300 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DGM85_00300 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DGM85_00315 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) DGM85_00325 PF04055 Radical SAM superfamily DGM85_00340 PF13091 PLD-like domain DGM85_00340 PF13396 Phospholipase_D-nuclease N-terminal DGM85_00350 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ DGM85_00385 PF05598 Transposase domain (DUF772) DGM85_00385 PF01609 Transposase DDE domain DGM85_00400 PF01609 Transposase DDE domain DGM85_00400 PF05598 Transposase domain (DUF772) DGM85_00405 PF05532 CsbD-like DGM85_00425 PF16485 Protealysin propeptide DGM85_00425 PF02868 Thermolysin metallopeptidase, alpha-helical domain DGM85_00425 PF01447 Thermolysin metallopeptidase, catalytic domain DGM85_00435 PF00293 NUDIX domain DGM85_00435 PF13344 Haloacid dehalogenase-like hydrolase DGM85_00450 PF00085 Thioredoxin DGM85_00460 PF00083 Sugar (and other) transporter DGM85_00460 PF08946 Osmosensory transporter coiled coil DGM85_00500 PF07726 ATPase family associated with various cellular activities (AAA) DGM85_00500 PF17863 AAA lid domain DGM85_00545 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain DGM85_00550 PF00155 Aminotransferase class I and II DGM85_00555 PF07715 TonB-dependent Receptor Plug Domain DGM85_00555 PF00593 TonB dependent receptor DGM85_00580 PF02735 Ku70/Ku80 beta-barrel domain DGM85_00585 PF01070 FMN-dependent dehydrogenase DGM85_00590 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family DGM85_00595 PF07730 Histidine kinase DGM85_00600 PF00196 Bacterial regulatory proteins, luxR family DGM85_00600 PF00072 Response regulator receiver domain DGM85_00630 PF12241 Trans-2-enoyl-CoA reductase catalytic region DGM85_00630 PF07055 Enoyl reductase FAD binding domain DGM85_00630 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase DGM85_00640 PF00294 pfkB family carbohydrate kinase DGM85_00675 PF00872 Transposase, Mutator family DGM85_00685 PF01925 Sulfite exporter TauE/SafE DGM85_00705 PF01609 Transposase DDE domain DGM85_00705 PF05598 Transposase domain (DUF772) DGM85_00730 PF00872 Transposase, Mutator family DGM85_00735 PF02810 SEC-C motif DGM85_00745 PF01263 Aldose 1-epimerase DGM85_00760 PF07690 Major Facilitator Superfamily DGM85_00765 PF01126 Heme oxygenase DGM85_00770 PF08446 PAS fold DGM85_00770 PF13426 PAS domain DGM85_00770 PF00360 Phytochrome region DGM85_00770 PF01590 GAF domain DGM85_00775 PF03594 Benzoate membrane transport protein DGM85_00805 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DGM85_00805 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DGM85_00805 PF06827 Zinc finger found in FPG and IleRS DGM85_00815 PF04349 Periplasmic glucan biosynthesis protein, MdoG DGM85_00820 PF01590 GAF domain DGM85_00820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM85_00820 PF00512 His Kinase A (phospho-acceptor) domain DGM85_00820 PF00360 Phytochrome region DGM85_00820 PF08446 PAS fold DGM85_00825 PF00265 Thymidine kinase DGM85_00830 PF00580 UvrD/REP helicase N-terminal domain DGM85_00830 PF13361 UvrD-like helicase C-terminal domain DGM85_00880 PF06969 HemN C-terminal domain DGM85_00880 PF04055 Radical SAM superfamily DGM85_00890 PF04337 Protein of unknown function, DUF480 DGM85_00895 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) DGM85_00900 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DGM85_00905 PF04820 Tryptophan halogenase DGM85_00920 PF00356 Bacterial regulatory proteins, lacI family DGM85_00935 PF01553 Acyltransferase DGM85_00945 PF14765 Polyketide synthase dehydratase DGM85_00945 PF00698 Acyl transferase domain DGM85_00945 PF08240 Alcohol dehydrogenase GroES-like domain DGM85_00945 PF00107 Zinc-binding dehydrogenase DGM85_00945 PF16197 Ketoacyl-synthetase C-terminal extension DGM85_00945 PF00109 Beta-ketoacyl synthase, N-terminal domain DGM85_00945 PF02801 Beta-ketoacyl synthase, C-terminal domain DGM85_00945 PF08659 KR domain DGM85_00945 PF00550 Phosphopantetheine attachment site DGM85_00975 PF00872 Transposase, Mutator family DGM85_00985 PF04616 Glycosyl hydrolases family 43 DGM85_01005 PF03422 Carbohydrate binding module (family 6) DGM85_01005 PF00553 Cellulose binding domain DGM85_01005 PF00331 Glycosyl hydrolase family 10 DGM85_01015 PF05598 Transposase domain (DUF772) DGM85_01015 PF01609 Transposase DDE domain DGM85_01020 PF00553 Cellulose binding domain DGM85_01020 PF00331 Glycosyl hydrolase family 10 DGM85_01020 PF03422 Carbohydrate binding module (family 6) DGM85_01025 PF02614 Glucuronate isomerase DGM85_01035 PF00331 Glycosyl hydrolase family 10 DGM85_01040 PF08450 SMP-30/Gluconolactonase/LRE-like region DGM85_01055 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DGM85_01055 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DGM85_01065 PF00202 Aminotransferase class-III DGM85_01080 PF00171 Aldehyde dehydrogenase family DGM85_01130 PF01232 Mannitol dehydrogenase Rossmann domain DGM85_01130 PF08125 Mannitol dehydrogenase C-terminal domain DGM85_01140 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain DGM85_01140 PF04616 Glycosyl hydrolases family 43 DGM85_01145 PF13378 Enolase C-terminal domain-like DGM85_01145 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DGM85_01155 PF03648 Glycosyl hydrolase family 67 N-terminus DGM85_01155 PF07488 Glycosyl hydrolase family 67 middle domain DGM85_01155 PF07477 Glycosyl hydrolase family 67 C-terminus DGM85_01160 PF00356 Bacterial regulatory proteins, lacI family DGM85_01175 PF01171 PP-loop family DGM85_01180 PF04381 Putative exonuclease, RdgC DGM85_01195 PF12697 Alpha/beta hydrolase family DGM85_01200 PF00762 Ferrochelatase DGM85_01210 PF02416 mttA/Hcf106 family DGM85_01215 PF02416 mttA/Hcf106 family DGM85_01220 PF00902 Sec-independent protein translocase protein (TatC) DGM85_01235 PF00958 GMP synthase C terminal domain DGM85_01235 PF00117 Glutamine amidotransferase class-I DGM85_01250 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DGM85_01250 PF00437 Type II/IV secretion system protein DGM85_01255 PF02091 Glycyl-tRNA synthetase alpha subunit DGM85_01260 PF05746 DALR anticodon binding domain DGM85_01260 PF02092 Glycyl-tRNA synthetase beta subunit DGM85_01265 PF13181 Tetratricopeptide repeat DGM85_01275 PF00593 TonB dependent receptor DGM85_01275 PF07715 TonB-dependent Receptor Plug Domain DGM85_01280 PF01103 Surface antigen DGM85_01280 PF17243 POTRA domain TamA domain 1 DGM85_01285 PF04357 TamB, inner membrane protein subunit of TAM complex DGM85_01305 PF01011 PQQ enzyme repeat DGM85_01305 PF13360 PQQ-like domain DGM85_01305 PF13570 PQQ-like domain DGM85_01325 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain DGM85_01325 PF06165 Glycosyltransferase family 36 DGM85_01340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM85_01340 PF00512 His Kinase A (phospho-acceptor) domain DGM85_01345 PF02659 Putative manganese efflux pump DGM85_01355 PF12833 Helix-turn-helix domain DGM85_01355 PF02311 AraC-like ligand binding domain DGM85_01360 PF01614 Bacterial transcriptional regulator DGM85_01360 PF09339 IclR helix-turn-helix domain DGM85_01365 PF07690 Major Facilitator Superfamily DGM85_01370 PF05336 L-rhamnose mutarotase DGM85_01375 PF13378 Enolase C-terminal domain-like DGM85_01375 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DGM85_01380 PF01557 Fumarylacetoacetate (FAA) hydrolase family DGM85_01395 PF00248 Aldo/keto reductase family DGM85_01405 PF04616 Glycosyl hydrolases family 43 DGM85_01405 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain DGM85_01435 PF00196 Bacterial regulatory proteins, luxR family DGM85_01435 PF00072 Response regulator receiver domain DGM85_01440 PF13193 AMP-binding enzyme C-terminal domain DGM85_01440 PF16177 Acetyl-coenzyme A synthetase N-terminus DGM85_01440 PF00501 AMP-binding enzyme DGM85_01450 PF04341 Protein of unknown function, DUF485 DGM85_01455 PF00474 Sodium:solute symporter family DGM85_01465 PF00639 PPIC-type PPIASE domain DGM85_01465 PF09312 SurA N-terminal domain DGM85_01475 PF00480 ROK family DGM85_01480 PF03372 Endonuclease/Exonuclease/phosphatase family DGM85_01490 PF04226 Transglycosylase associated protein DGM85_01495 PF01648 4'-phosphopantetheinyl transferase superfamily DGM85_01500 PF16655 PhoD-like phosphatase, N-terminal domain DGM85_01500 PF09423 PhoD-like phosphatase DGM85_01505 PF09423 PhoD-like phosphatase DGM85_01505 PF16655 PhoD-like phosphatase, N-terminal domain DGM85_01510 PF02527 rRNA small subunit methyltransferase G DGM85_01535 PF13533 Biotin-lipoyl like DGM85_01540 PF00872 Transposase, Mutator family DGM85_01550 PF00873 AcrB/AcrD/AcrF family DGM85_01560 PF00830 Ribosomal L28 family DGM85_01565 PF00471 Ribosomal protein L33 DGM85_01570 PF04909 Amidohydrolase DGM85_01580 PF04303 PrpF protein DGM85_01585 PF03737 Aldolase/RraA DGM85_01590 PF03466 LysR substrate binding domain DGM85_01590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM85_01595 PF13396 Phospholipase_D-nuclease N-terminal DGM85_01595 PF13091 PLD-like domain DGM85_01610 PF00580 UvrD/REP helicase N-terminal domain DGM85_01610 PF13361 UvrD-like helicase C-terminal domain DGM85_01620 PF14602 Hexapeptide repeat of succinyl-transferase DGM85_01620 PF12464 Maltose acetyltransferase DGM85_01635 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 DGM85_01640 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath DGM85_01645 PF05638 Type VI secretion system effector, Hcp DGM85_01655 PF07024 ImpE protein DGM85_01660 PF04965 Gene 25-like lysozyme DGM85_01665 PF05947 Type VI secretion system, TssF DGM85_01695 PF00872 Transposase, Mutator family DGM85_01720 PF01425 Amidase DGM85_01730 PF03372 Endonuclease/Exonuclease/phosphatase family DGM85_01755 PF04542 Sigma-70 region 2 DGM85_01755 PF08281 Sigma-70, region 4 DGM85_01765 PF03793 PASTA domain DGM85_01765 PF00069 Protein kinase domain DGM85_01780 PF04717 Type VI secretion system, phage-baseplate injector DGM85_01795 PF03466 LysR substrate binding domain DGM85_01795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM85_01800 PF00248 Aldo/keto reductase family DGM85_01805 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE DGM85_01810 PF05736 OprF membrane domain DGM85_01810 PF00691 OmpA family DGM85_01850 PF06812 ImpA, N-terminal, type VI secretion system DGM85_01860 PF01367 5'-3' exonuclease, C-terminal SAM fold DGM85_01860 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DGM85_01860 PF00476 DNA polymerase family A DGM85_01860 PF01612 3'-5' exonuclease DGM85_01870 PF01218 Coproporphyrinogen III oxidase DGM85_01915 PF04820 Tryptophan halogenase DGM85_01920 PF00550 Phosphopantetheine attachment site DGM85_01930 PF01553 Acyltransferase DGM85_01935 PF07977 FabA-like domain DGM85_01990 PF00535 Glycosyl transferase family 2 DGM85_02000 PF00109 Beta-ketoacyl synthase, N-terminal domain DGM85_02000 PF02801 Beta-ketoacyl synthase, C-terminal domain DGM85_02005 PF05166 YcgL domain DGM85_02020 PF00723 Glycosyl hydrolases family 15 DGM85_02025 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DGM85_02025 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DGM85_02055 PF00194 Eukaryotic-type carbonic anhydrase DGM85_02065 PF00571 CBS domain DGM85_02065 PF01769 Divalent cation transporter DGM85_02065 PF03448 MgtE intracellular N domain DGM85_02070 PF00583 Acetyltransferase (GNAT) family DGM85_02070 PF13380 CoA binding domain DGM85_02070 PF13607 Succinyl-CoA ligase like flavodoxin domain DGM85_02085 PF00317 Ribonucleotide reductase, all-alpha domain DGM85_02085 PF02867 Ribonucleotide reductase, barrel domain DGM85_02085 PF03477 ATP cone domain DGM85_02090 PF00268 Ribonucleotide reductase, small chain DGM85_02110 PF00085 Thioredoxin DGM85_02145 PF02558 Ketopantoate reductase PanE/ApbA DGM85_02145 PF08546 Ketopantoate reductase PanE/ApbA C terminal DGM85_02150 PF01061 ABC-2 type transporter DGM85_02155 PF00005 ABC transporter DGM85_02165 PF00970 Oxidoreductase FAD-binding domain DGM85_02165 PF00111 2Fe-2S iron-sulfur cluster binding domain DGM85_02165 PF00175 Oxidoreductase NAD-binding domain DGM85_02170 PF01545 Cation efflux family DGM85_02175 PF02583 Metal-sensitive transcriptional repressor DGM85_02190 PF01381 Helix-turn-helix DGM85_02200 PF00005 ABC transporter DGM85_02215 PF04820 Tryptophan halogenase DGM85_02265 PF00490 Delta-aminolevulinic acid dehydratase DGM85_02275 PF00667 FAD binding domain DGM85_02275 PF00258 Flavodoxin DGM85_02275 PF00175 Oxidoreductase NAD-binding domain DGM85_02285 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DGM85_02285 PF01488 Shikimate / quinate 5-dehydrogenase DGM85_02285 PF08501 Shikimate dehydrogenase substrate binding domain DGM85_02300 PF06733 DEAD_2 DGM85_02300 PF13307 Helicase C-terminal domain DGM85_02305 PF00529 HlyD membrane-fusion protein of T1SS DGM85_02305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DGM85_02340 PF06628 Catalase-related immune-responsive DGM85_02340 PF00199 Catalase DGM85_02360 PF01207 Dihydrouridine synthase (Dus) DGM85_02370 PF00072 Response regulator receiver domain DGM85_02370 PF00486 Transcriptional regulatory protein, C terminal DGM85_02375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM85_02390 PF06167 Glucose-regulated metallo-peptidase M90 DGM85_02405 PF02237 Biotin protein ligase C terminal domain DGM85_02405 PF03099 Biotin/lipoate A/B protein ligase family DGM85_02405 PF08279 HTH domain DGM85_02410 PF03309 Type III pantothenate kinase DGM85_02425 PF02223 Thymidylate kinase DGM85_02455 PF00491 Arginase family DGM85_02470 PF05532 CsbD-like DGM85_02475 PF00579 tRNA synthetases class I (W and Y) DGM85_02480 PF00753 Metallo-beta-lactamase superfamily DGM85_02505 PF00892 EamA-like transporter family DGM85_02530 PF00005 ABC transporter DGM85_02535 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DGM85_02540 PF07730 Histidine kinase DGM85_02545 PF00196 Bacterial regulatory proteins, luxR family DGM85_02545 PF00072 Response regulator receiver domain DGM85_02560 PF00199 Catalase DGM85_02565 PF04542 Sigma-70 region 2 DGM85_02565 PF08281 Sigma-70, region 4 DGM85_02575 PF00883 Cytosol aminopeptidase family, catalytic domain DGM85_02575 PF02789 Cytosol aminopeptidase family, N-terminal domain DGM85_02580 PF13419 Haloacid dehalogenase-like hydrolase DGM85_02585 PF01594 AI-2E family transporter DGM85_02605 PF00595 PDZ domain DGM85_02625 PF08521 Two-component sensor kinase N-terminal DGM85_02625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM85_02625 PF00512 His Kinase A (phospho-acceptor) domain DGM85_02630 PF00486 Transcriptional regulatory protein, C terminal DGM85_02630 PF00072 Response regulator receiver domain DGM85_02635 PF08338 Domain of unknown function (DUF1731) DGM85_02635 PF01370 NAD dependent epimerase/dehydratase family DGM85_02675 PF01139 tRNA-splicing ligase RtcB DGM85_02695 PF00440 Bacterial regulatory proteins, tetR family DGM85_02700 PF00970 Oxidoreductase FAD-binding domain DGM85_02700 PF00111 2Fe-2S iron-sulfur cluster binding domain DGM85_02700 PF00175 Oxidoreductase NAD-binding domain DGM85_02705 PF00487 Fatty acid desaturase DGM85_02710 PF12792 CSS motif domain associated with EAL DGM85_02710 PF00563 EAL domain DGM85_02725 PF01078 Magnesium chelatase, subunit ChlI DGM85_02725 PF13335 Magnesium chelatase, subunit ChlI C-terminal DGM85_02730 PF04380 Membrane fusogenic activity DGM85_02735 PF00543 Nitrogen regulatory protein P-II DGM85_02745 PF00754 F5/8 type C domain DGM85_02745 PF00041 Fibronectin type III domain DGM85_02745 PF02838 Glycosyl hydrolase family 20, domain 2 DGM85_02745 PF07555 beta-N-acetylglucosaminidase DGM85_02745 PF00963 Cohesin domain DGM85_02765 PF17284 Spermidine synthase tetramerisation domain DGM85_02770 PF17810 Arginine decarboxylase helical bundle domain DGM85_02770 PF17944 Arginine decarboxylase C-terminal helical extension DGM85_02770 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DGM85_02775 PF00975 Thioesterase domain DGM85_02775 PF00550 Phosphopantetheine attachment site DGM85_02775 PF13193 AMP-binding enzyme C-terminal domain DGM85_02775 PF00501 AMP-binding enzyme DGM85_02775 PF00668 Condensation domain DGM85_02780 PF03033 Glycosyltransferase family 28 N-terminal domain DGM85_02785 PF01757 Acyltransferase family DGM85_02790 PF00106 short chain dehydrogenase DGM85_02805 PF03485 Arginyl tRNA synthetase N terminal domain DGM85_02805 PF05746 DALR anticodon binding domain DGM85_02805 PF00750 tRNA synthetases class I (R) DGM85_02810 PF04002 RadC-like JAB domain DGM85_02815 PF04127 DNA / pantothenate metabolism flavoprotein DGM85_02815 PF02441 Flavoprotein DGM85_02820 PF00692 dUTPase DGM85_02825 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DGM85_02825 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DGM85_02825 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DGM85_02825 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DGM85_02840 PF00535 Glycosyl transferase family 2 DGM85_02845 PF01370 NAD dependent epimerase/dehydratase family DGM85_02855 PF17762 HTH domain found in ParB protein DGM85_02855 PF02195 ParB-like nuclease domain DGM85_02860 PF13614 AAA domain DGM85_02870 PF00156 Phosphoribosyl transferase domain DGM85_02875 PF03372 Endonuclease/Exonuclease/phosphatase family DGM85_02880 PF07690 Major Facilitator Superfamily DGM85_02890 PF03702 Anhydro-N-acetylmuramic acid kinase DGM85_02900 PF04225 Opacity-associated protein A LysM-like domain DGM85_02900 PF01551 Peptidase family M23 DGM85_02905 PF00579 tRNA synthetases class I (W and Y) DGM85_02945 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DGM85_02945 PF02790 Cytochrome C oxidase subunit II, transmembrane domain DGM85_02950 PF00115 Cytochrome C and Quinol oxidase polypeptide I DGM85_02960 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 DGM85_02965 PF00510 Cytochrome c oxidase subunit III DGM85_02990 PF01040 UbiA prenyltransferase family DGM85_03000 PF13593 SBF-like CPA transporter family (DUF4137) DGM85_03005 PF10410 DnaB-helicase binding domain of primase DGM85_03005 PF08278 DNA primase DnaG DnaB-binding DGM85_03005 PF08275 DNA primase catalytic core, N-terminal domain DGM85_03005 PF01807 CHC2 zinc finger DGM85_03010 PF03631 Virulence factor BrkB DGM85_03020 PF09424 Yqey-like protein DGM85_03025 PF01165 Ribosomal protein S21 DGM85_03030 PF00814 Glycoprotease family DGM85_03035 PF02152 Dihydroneopterin aldolase DGM85_03040 PF14310 Fibronectin type III-like domain DGM85_03040 PF00933 Glycosyl hydrolase family 3 N terminal domain DGM85_03040 PF01915 Glycosyl hydrolase family 3 C-terminal domain DGM85_03045 PF07995 Glucose / Sorbosone dehydrogenase DGM85_03050 PF05360 yiaA/B two helix domain DGM85_03065 PF13520 Amino acid permease DGM85_03075 PF13378 Enolase C-terminal domain-like DGM85_03075 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DGM85_03085 PF01510 N-acetylmuramoyl-L-alanine amidase DGM85_03090 PF01427 D-ala-D-ala dipeptidase DGM85_03125 PF07063 Domain of unknown function (DUF1338) DGM85_03130 PF00873 AcrB/AcrD/AcrF family DGM85_03135 PF00873 AcrB/AcrD/AcrF family DGM85_03140 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DGM85_03145 PF01546 Peptidase family M20/M25/M40 DGM85_03145 PF07687 Peptidase dimerisation domain DGM85_03150 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term DGM85_03150 PF14489 QueF-like protein DGM85_03155 PF01476 LysM domain DGM85_03155 PF04972 BON domain DGM85_03165 PF03971 Monomeric isocitrate dehydrogenase DGM85_03180 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) DGM85_03190 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DGM85_03190 PF07498 Rho termination factor, N-terminal domain DGM85_03190 PF07497 Rho termination factor, RNA-binding domain DGM85_03195 PF00085 Thioredoxin DGM85_03200 PF00270 DEAD/DEAH box helicase DGM85_03200 PF00271 Helicase conserved C-terminal domain DGM85_03200 PF12300 ATP-dependent RNA helicase RhlB DGM85_03205 PF00005 ABC transporter DGM85_03210 PF18075 FtsX extracellular domain DGM85_03215 PF00072 Response regulator receiver domain DGM85_03220 PF03167 Uracil DNA glycosylase superfamily DGM85_03225 PF04542 Sigma-70 region 2 DGM85_03225 PF04545 Sigma-70, region 4 DGM85_03230 PF03458 UPF0126 domain DGM85_03235 PF07992 Pyridine nucleotide-disulphide oxidoreductase DGM85_03250 PF13417 Glutathione S-transferase, N-terminal domain DGM85_03250 PF00043 Glutathione S-transferase, C-terminal domain DGM85_03255 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DGM85_03255 PF18074 Primosomal protein N C-terminal domain DGM85_03255 PF17764 3′ DNA-binding domain (3′BD) DGM85_03255 PF00271 Helicase conserved C-terminal domain DGM85_03255 PF00270 DEAD/DEAH box helicase DGM85_03275 PF01554 MatE DGM85_03280 PF01343 Peptidase family S49 DGM85_03305 PF01300 Telomere recombination DGM85_03310 PF01131 DNA topoisomerase DGM85_03310 PF01751 Toprim domain DGM85_03310 PF13368 Topoisomerase C-terminal repeat DGM85_03320 PF07963 Prokaryotic N-terminal methylation motif DGM85_03320 PF00114 Pilin (bacterial filament) DGM85_03325 PF04361 Protein of unknown function (DUF494) DGM85_03330 PF02481 DNA recombination-mediator protein A DGM85_03330 PF17782 DprA winged helix domain DGM85_03335 PF01476 LysM domain DGM85_03340 PF01327 Polypeptide deformylase DGM85_03345 PF02911 Formyl transferase, C-terminal domain DGM85_03345 PF00551 Formyl transferase DGM85_03350 PF01189 16S rRNA methyltransferase RsmB/F DGM85_03350 PF01029 NusB family DGM85_03365 PF00535 Glycosyl transferase family 2 DGM85_03385 PF00925 GTP cyclohydrolase II DGM85_03395 PF03279 Bacterial lipid A biosynthesis acyltransferase DGM85_03400 PF02580 D-Tyr-tRNA(Tyr) deacylase DGM85_03405 PF04546 Sigma-70, non-essential region DGM85_03405 PF03979 Sigma-70 factor, region 1.1 DGM85_03405 PF00140 Sigma-70 factor, region 1.2 DGM85_03405 PF04542 Sigma-70 region 2 DGM85_03405 PF04539 Sigma-70 region 3 DGM85_03405 PF04545 Sigma-70, region 4 DGM85_03430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM85_03430 PF03466 LysR substrate binding domain DGM85_03440 PF00557 Metallopeptidase family M24 DGM85_03450 PF00654 Voltage gated chloride channel DGM85_03455 PF01740 STAS domain DGM85_03455 PF00916 Sulfate permease family DGM85_03480 PF01042 Endoribonuclease L-PSP DGM85_03485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM85_03485 PF03466 LysR substrate binding domain DGM85_03495 PF00005 ABC transporter DGM85_03555 PF08240 Alcohol dehydrogenase GroES-like domain DGM85_03555 PF13823 Alcohol dehydrogenase GroES-associated DGM85_03555 PF00107 Zinc-binding dehydrogenase DGM85_03590 PF02322 Cytochrome bd terminal oxidase subunit II DGM85_03595 PF01654 Cytochrome bd terminal oxidase subunit I DGM85_03610 PF02954 Bacterial regulatory protein, Fis family DGM85_03610 PF00072 Response regulator receiver domain DGM85_03610 PF00158 Sigma-54 interaction domain DGM85_03625 PF01339 CheB methylesterase DGM85_03625 PF01739 CheR methyltransferase, SAM binding domain DGM85_03625 PF03705 CheR methyltransferase, all-alpha domain DGM85_03625 PF08448 PAS fold DGM85_03645 PF05067 Manganese containing catalase DGM85_03650 PF05974 Domain of unknown function (DUF892) DGM85_03670 PF06580 Histidine kinase DGM85_03670 PF02743 Cache domain DGM85_03670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM85_03670 PF00672 HAMP domain DGM85_03675 PF04397 LytTr DNA-binding domain DGM85_03675 PF00072 Response regulator receiver domain DGM85_03685 PF13520 Amino acid permease DGM85_03700 PF01431 Peptidase family M13 DGM85_03700 PF05649 Peptidase family M13 DGM85_03715 PF00248 Aldo/keto reductase family DGM85_03720 PF03358 NADPH-dependent FMN reductase DGM85_03725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM85_03725 PF03466 LysR substrate binding domain DGM85_03735 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DGM85_03745 PF03167 Uracil DNA glycosylase superfamily DGM85_03750 PF02469 Fasciclin domain DGM85_03760 PF00999 Sodium/hydrogen exchanger family DGM85_03765 PF00005 ABC transporter DGM85_03770 PF01061 ABC-2 type transporter DGM85_03795 PF00691 OmpA family DGM85_03795 PF13677 Membrane MotB of proton-channel complex MotA/MotB DGM85_03800 PF01618 MotA/TolQ/ExbB proton channel family DGM85_03810 PF01641 SelR domain DGM85_03820 PF01037 Lrp/AsnC ligand binding domain DGM85_03825 PF01266 FAD dependent oxidoreductase DGM85_03830 PF01168 Alanine racemase, N-terminal domain DGM85_03830 PF00842 Alanine racemase, C-terminal domain DGM85_03850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM85_03850 PF00512 His Kinase A (phospho-acceptor) domain DGM85_03850 PF00989 PAS fold DGM85_03860 PF07995 Glucose / Sorbosone dehydrogenase DGM85_03865 PF00872 Transposase, Mutator family DGM85_03880 PF01609 Transposase DDE domain DGM85_03880 PF05598 Transposase domain (DUF772) DGM85_03885 PF08468 Methyltransferase small domain N-terminal DGM85_03885 PF05175 Methyltransferase small domain DGM85_03890 PF00849 RNA pseudouridylate synthase DGM85_03890 PF01479 S4 domain DGM85_03895 PF13419 Haloacid dehalogenase-like hydrolase DGM85_03920 PF00072 Response regulator receiver domain DGM85_03920 PF00989 PAS fold DGM85_03920 PF01627 Hpt domain DGM85_03920 PF18415 Histidine kinase receptor ArcB trans-membrane domain DGM85_03920 PF00512 His Kinase A (phospho-acceptor) domain DGM85_03920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM85_03930 PF04461 Protein of unknown function (DUF520) DGM85_03935 PF00892 EamA-like transporter family DGM85_03940 PF09383 NIL domain DGM85_03940 PF00005 ABC transporter DGM85_03945 PF00528 Binding-protein-dependent transport system inner membrane component DGM85_03950 PF03180 NLPA lipoprotein DGM85_03985 PF02817 e3 binding domain DGM85_03985 PF00364 Biotin-requiring enzyme DGM85_03985 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DGM85_03995 PF07992 Pyridine nucleotide-disulphide oxidoreductase DGM85_03995 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DGM85_04015 PF00119 ATP synthase A chain DGM85_04020 PF00137 ATP synthase subunit C DGM85_04025 PF00430 ATP synthase B/B' CF(0) DGM85_04030 PF00213 ATP synthase delta (OSCP) subunit DGM85_04035 PF02874 ATP synthase alpha/beta family, beta-barrel domain DGM85_04035 PF00306 ATP synthase alpha/beta chain, C terminal domain DGM85_04035 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DGM85_04040 PF00231 ATP synthase DGM85_04045 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DGM85_04045 PF02874 ATP synthase alpha/beta family, beta-barrel domain DGM85_04050 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DGM85_04050 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DGM85_04055 PF01817 Chorismate mutase type II DGM85_04065 PF12804 MobA-like NTP transferase domain DGM85_04065 PF14602 Hexapeptide repeat of succinyl-transferase DGM85_04065 PF00132 Bacterial transferase hexapeptide (six repeats) DGM85_04070 PF00512 His Kinase A (phospho-acceptor) domain DGM85_04070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM85_04075 PF02954 Bacterial regulatory protein, Fis family DGM85_04075 PF00158 Sigma-54 interaction domain DGM85_04075 PF00072 Response regulator receiver domain DGM85_04085 PF00005 ABC transporter DGM85_04085 PF02687 FtsX-like permease family DGM85_04085 PF12704 MacB-like periplasmic core domain DGM85_04090 PF00005 ABC transporter DGM85_04090 PF02687 FtsX-like permease family DGM85_04090 PF12704 MacB-like periplasmic core domain DGM85_04095 PF00005 ABC transporter DGM85_04100 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DGM85_04105 PF01380 SIS domain DGM85_04130 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DGM85_04135 PF05275 Copper resistance protein B precursor (CopB) DGM85_04140 PF07732 Multicopper oxidase DGM85_04140 PF07731 Multicopper oxidase DGM85_04140 PF00394 Multicopper oxidase DGM85_04155 PF01432 Peptidase family M3 DGM85_04165 PF08239 Bacterial SH3 domain DGM85_04170 PF02801 Beta-ketoacyl synthase, C-terminal domain DGM85_04170 PF00109 Beta-ketoacyl synthase, N-terminal domain DGM85_04175 PF07977 FabA-like domain DGM85_04180 PF00817 impB/mucB/samB family DGM85_04180 PF11799 impB/mucB/samB family C-terminal domain DGM85_04185 PF13419 Haloacid dehalogenase-like hydrolase DGM85_04195 PF13185 GAF domain DGM85_04215 PF01242 6-pyruvoyl tetrahydropterin synthase DGM85_04220 PF00270 DEAD/DEAH box helicase DGM85_04220 PF00271 Helicase conserved C-terminal domain DGM85_04235 PF14497 Glutathione S-transferase, C-terminal domain DGM85_04235 PF02798 Glutathione S-transferase, N-terminal domain DGM85_04240 PF00437 Type II/IV secretion system protein DGM85_04260 PF00291 Pyridoxal-phosphate dependent enzyme DGM85_04260 PF00571 CBS domain DGM85_04265 PF01053 Cys/Met metabolism PLP-dependent enzyme DGM85_04275 PF13439 Glycosyltransferase Family 4 DGM85_04275 PF00534 Glycosyl transferases group 1 DGM85_04285 PF00005 ABC transporter DGM85_04290 PF13847 Methyltransferase domain DGM85_04290 PF00069 Protein kinase domain DGM85_04295 PF13477 Glycosyl transferase 4-like DGM85_04295 PF00534 Glycosyl transferases group 1 DGM85_04300 PF16363 GDP-mannose 4,6 dehydratase DGM85_04305 PF01370 NAD dependent epimerase/dehydratase family DGM85_04320 PF01593 Flavin containing amine oxidoreductase DGM85_04325 PF01370 NAD dependent epimerase/dehydratase family DGM85_04330 PF00106 short chain dehydrogenase DGM85_04335 PF04030 D-arabinono-1,4-lactone oxidase DGM85_04335 PF01565 FAD binding domain DGM85_04340 PF01040 UbiA prenyltransferase family DGM85_04350 PF01012 Electron transfer flavoprotein domain DGM85_04350 PF00766 Electron transfer flavoprotein FAD-binding domain DGM85_04355 PF01012 Electron transfer flavoprotein domain DGM85_04360 PF16363 GDP-mannose 4,6 dehydratase DGM85_04365 PF00483 Nucleotidyl transferase DGM85_04370 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DGM85_04375 PF04321 RmlD substrate binding domain DGM85_04380 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DGM85_04380 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DGM85_04380 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DGM85_04385 PF01050 Mannose-6-phosphate isomerase DGM85_04385 PF00483 Nucleotidyl transferase DGM85_04390 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DGM85_04390 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DGM85_04390 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DGM85_04390 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DGM85_04395 PF01144 Coenzyme A transferase DGM85_04400 PF01144 Coenzyme A transferase DGM85_04420 PF02470 MlaD protein DGM85_04420 PF03886 ABC-type transport auxiliary lipoprotein component DGM85_04425 PF00005 ABC transporter DGM85_04430 PF02405 Permease MlaE DGM85_04440 PF00816 H-NS histone family DGM85_04445 PF03129 Anticodon binding domain DGM85_04445 PF04073 Aminoacyl-tRNA editing domain DGM85_04445 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DGM85_04455 PF01066 CDP-alcohol phosphatidyltransferase DGM85_04470 PF00544 Pectate lyase DGM85_04480 PF05199 GMC oxidoreductase DGM85_04480 PF00732 GMC oxidoreductase DGM85_04485 PF00171 Aldehyde dehydrogenase family DGM85_04490 PF02028 BCCT, betaine/carnitine/choline family transporter DGM85_04500 PF01323 DSBA-like thioredoxin domain DGM85_04510 PF00034 Cytochrome c DGM85_04515 PF01926 50S ribosome-binding GTPase DGM85_04525 PF04107 Glutamate-cysteine ligase family 2(GCS2) DGM85_04530 PF00672 HAMP domain DGM85_04530 PF00512 His Kinase A (phospho-acceptor) domain DGM85_04530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM85_04535 PF00072 Response regulator receiver domain DGM85_04535 PF00486 Transcriptional regulatory protein, C terminal DGM85_04550 PF02583 Metal-sensitive transcriptional repressor DGM85_04555 PF08240 Alcohol dehydrogenase GroES-like domain DGM85_04555 PF00107 Zinc-binding dehydrogenase DGM85_04560 PF04828 Glutathione-dependent formaldehyde-activating enzyme DGM85_04565 PF00756 Putative esterase DGM85_04585 PF02645 Uncharacterised protein, DegV family COG1307 DGM85_04620 PF01979 Amidohydrolase family DGM85_04625 PF01979 Amidohydrolase family DGM85_04640 PF00462 Glutaredoxin DGM85_04645 PF01522 Polysaccharide deacetylase DGM85_04660 PF00155 Aminotransferase class I and II DGM85_04665 PF03193 RsgA GTPase DGM85_04680 PF00128 Alpha amylase, catalytic domain DGM85_04695 PF00356 Bacterial regulatory proteins, lacI family DGM85_04700 PF00106 short chain dehydrogenase DGM85_04705 PF03600 Citrate transporter DGM85_04720 PF00072 Response regulator receiver domain DGM85_04720 PF00486 Transcriptional regulatory protein, C terminal DGM85_04725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM85_04725 PF00512 His Kinase A (phospho-acceptor) domain DGM85_04725 PF08521 Two-component sensor kinase N-terminal DGM85_04740 PF00072 Response regulator receiver domain DGM85_04740 PF00196 Bacterial regulatory proteins, luxR family DGM85_04755 PF00248 Aldo/keto reductase family DGM85_04760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM85_04760 PF03466 LysR substrate binding domain DGM85_04780 PF07690 Major Facilitator Superfamily DGM85_04785 PF02743 Cache domain DGM85_04785 PF00512 His Kinase A (phospho-acceptor) domain DGM85_04785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM85_04795 PF00375 Sodium:dicarboxylate symporter family DGM85_04800 PF01515 Phosphate acetyl/butaryl transferase DGM85_04800 PF00390 Malic enzyme, N-terminal domain DGM85_04800 PF03949 Malic enzyme, NAD binding domain DGM85_04825 PF03279 Bacterial lipid A biosynthesis acyltransferase DGM85_04830 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) DGM85_04835 PF02321 Outer membrane efflux protein DGM85_04855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM85_04860 PF00330 Aconitase family (aconitate hydratase) DGM85_04865 PF00694 Aconitase C-terminal domain DGM85_04870 PF00180 Isocitrate/isopropylmalate dehydrogenase DGM85_04880 PF08502 LeuA allosteric (dimerisation) domain DGM85_04880 PF00682 HMGL-like DGM85_04885 PF00291 Pyridoxal-phosphate dependent enzyme DGM85_04895 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DGM85_04895 PF00205 Thiamine pyrophosphate enzyme, central domain DGM85_04895 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DGM85_04900 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DGM85_04900 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DGM85_04910 PF00672 HAMP domain DGM85_04910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGM85_04910 PF02203 Tar ligand binding domain homologue DGM85_04915 PF07715 TonB-dependent Receptor Plug Domain DGM85_04915 PF00593 TonB dependent receptor DGM85_04925 PF13667 ThiC-associated domain DGM85_04925 PF01964 Radical SAM ThiC family DGM85_04930 PF00486 Transcriptional regulatory protein, C terminal DGM85_04930 PF18500 CadC C-terminal domain 1 DGM85_04935 PF12833 Helix-turn-helix domain DGM85_04940 PF07715 TonB-dependent Receptor Plug Domain DGM85_04940 PF00593 TonB dependent receptor DGM85_04950 PF00719 Inorganic pyrophosphatase DGM85_04960 PF03030 Inorganic H+ pyrophosphatase DGM85_04970 PF00365 Phosphofructokinase DGM85_04980 PF01225 Mur ligase family, catalytic domain DGM85_04980 PF02875 Mur ligase family, glutamate ligase domain DGM85_04980 PF08245 Mur ligase middle domain DGM85_04990 PF01062 Bestrophin, RFP-TM, chloride channel DGM85_05000 PF01569 PAP2 superfamily DGM85_05015 PF00027 Cyclic nucleotide-binding domain DGM85_05015 PF00520 Ion transport protein DGM85_05020 PF00202 Aminotransferase class-III DGM85_05045 PF00034 Cytochrome c DGM85_05045 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DGM85_05055 PF00155 Aminotransferase class I and II DGM85_05060 PF00127 Copper binding proteins, plastocyanin/azurin family DGM85_05065 PF00196 Bacterial regulatory proteins, luxR family DGM85_05065 PF17874 MalT-like TPR region DGM85_05070 PF00202 Aminotransferase class-III DGM85_05110 PF02581 Thiamine monophosphate synthase DGM85_05115 PF00301 Rubredoxin DGM85_05125 PF13369 Transglutaminase-like superfamily DGM85_05135 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DGM85_05145 PF01812 5-formyltetrahydrofolate cyclo-ligase family DGM85_05155 PF05164 Cell division protein ZapA DGM85_05165 PF03695 Uncharacterised protein family (UPF0149) DGM85_05170 PF00557 Metallopeptidase family M24 DGM85_05170 PF05195 Aminopeptidase P, N-terminal domain DGM85_05180 PF00557 Metallopeptidase family M24 DGM85_05195 PF06969 HemN C-terminal domain DGM85_05195 PF04055 Radical SAM superfamily DGM85_05200 PF01725 Ham1 family DGM85_05210 PF01138 3' exoribonuclease family, domain 1 DGM85_05210 PF03725 3' exoribonuclease family, domain 2 DGM85_05215 PF08340 Domain of unknown function (DUF1732) DGM85_05215 PF03755 YicC-like family, N-terminal region DGM85_05220 PF00625 Guanylate kinase DGM85_05225 PF01192 RNA polymerase Rpb6 DGM85_05230 PF04607 Region found in RelA / SpoT proteins DGM85_05230 PF13291 ACT domain DGM85_05230 PF02824 TGS domain DGM85_05235 PF01042 Endoribonuclease L-PSP DGM85_05240 PF00271 Helicase conserved C-terminal domain DGM85_05240 PF17191 RecG wedge domain DGM85_05240 PF00270 DEAD/DEAH box helicase DGM85_05245 PF01156 Inosine-uridine preferring nucleoside hydrolase DGM85_05250 PF01197 Ribosomal protein L31 DGM85_05255 PF00285 Citrate synthase, C-terminal domain DGM85_05265 PF17092 Penicillin-binding protein OB-like domain DGM85_05265 PF00912 Transglycosylase DGM85_05265 PF00905 Penicillin binding protein transpeptidase domain DGM85_05270 PF11104 Type IV pilus assembly protein PilM; DGM85_05275 PF05137 Fimbrial assembly protein (PilN) DGM85_05280 PF04350 Pilus assembly protein, PilO DGM85_05285 PF04351 Pilus assembly protein, PilP DGM85_05290 PF11741 AMIN domain DGM85_05290 PF00263 Bacterial type II and III secretion system protein DGM85_05290 PF07660 Secretin and TonB N terminus short domain DGM85_05290 PF03958 Bacterial type II/III secretion system short domain DGM85_05295 PF17863 AAA lid domain DGM85_05295 PF07726 ATPase family associated with various cellular activities (AAA) DGM85_05315 PF07584 Aerotolerance regulator N-terminal DGM85_05315 PF00092 von Willebrand factor type A domain DGM85_05325 PF00375 Sodium:dicarboxylate symporter family DGM85_05330 PF00456 Transketolase, thiamine diphosphate binding domain DGM85_05330 PF02780 Transketolase, C-terminal domain DGM85_05330 PF02779 Transketolase, pyrimidine binding domain DGM85_05345 PF07715 TonB-dependent Receptor Plug Domain DGM85_05345 PF00593 TonB dependent receptor DGM85_05350 PF04225 Opacity-associated protein A LysM-like domain DGM85_05350 PF01551 Peptidase family M23 DGM85_05355 PF03734 L,D-transpeptidase catalytic domain DGM85_05355 PF01476 LysM domain DGM85_05380 PF00501 AMP-binding enzyme DGM85_05425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM85_05425 PF00512 His Kinase A (phospho-acceptor) domain DGM85_05425 PF08521 Two-component sensor kinase N-terminal DGM85_05445 PF00005 ABC transporter DGM85_05445 PF03459 TOBE domain DGM85_05450 PF00528 Binding-protein-dependent transport system inner membrane component DGM85_05460 PF04273 Putative phosphatase (DUF442) DGM85_05460 PF00753 Metallo-beta-lactamase superfamily DGM85_05475 PF03922 OmpW family DGM85_05485 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DGM85_05485 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DGM85_05515 PF00162 Phosphoglycerate kinase DGM85_05525 PF00224 Pyruvate kinase, barrel domain DGM85_05525 PF02887 Pyruvate kinase, alpha/beta domain DGM85_05535 PF00274 Fructose-bisphosphate aldolase class-I DGM85_05540 PF01661 Macro domain DGM85_05550 PF00291 Pyridoxal-phosphate dependent enzyme DGM85_05555 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DGM85_05555 PF10414 Sirohaem synthase dimerisation region DGM85_05555 PF14824 Sirohaem biosynthesis protein central DGM85_05560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM85_05560 PF03466 LysR substrate binding domain DGM85_05575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM85_05575 PF00512 His Kinase A (phospho-acceptor) domain DGM85_05575 PF01627 Hpt domain DGM85_05575 PF00072 Response regulator receiver domain DGM85_05595 PF01507 Phosphoadenosine phosphosulfate reductase family DGM85_05600 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DGM85_05600 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DGM85_05605 PF00667 FAD binding domain DGM85_05605 PF00258 Flavodoxin DGM85_05605 PF00175 Oxidoreductase NAD-binding domain DGM85_05610 PF01507 Phosphoadenosine phosphosulfate reductase family DGM85_05615 PF00009 Elongation factor Tu GTP binding domain DGM85_05620 PF00529 HlyD membrane-fusion protein of T1SS DGM85_05620 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DGM85_05625 PF00873 AcrB/AcrD/AcrF family DGM85_05630 PF01433 Peptidase family M1 domain DGM85_05630 PF11838 ERAP1-like C-terminal domain DGM85_05640 PF08032 RNA 2'-O ribose methyltransferase substrate binding DGM85_05640 PF00588 SpoU rRNA Methylase family DGM85_05645 PF00135 Carboxylesterase family DGM85_05650 PF10566 Glycoside hydrolase 97 DGM85_05650 PF14508 Glycosyl-hydrolase 97 N-terminal DGM85_05650 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation DGM85_05665 PF00356 Bacterial regulatory proteins, lacI family DGM85_05675 PF01741 Large-conductance mechanosensitive channel, MscL DGM85_05680 PF01557 Fumarylacetoacetate (FAA) hydrolase family DGM85_05700 PF02080 TrkA-C domain DGM85_05700 PF03600 Citrate transporter DGM85_05705 PF02390 Putative methyltransferase DGM85_05710 PF05690 Thiazole biosynthesis protein ThiG DGM85_05720 PF03797 Autotransporter beta-domain DGM85_05720 PF00657 GDSL-like Lipase/Acylhydrolase DGM85_05735 PF01609 Transposase DDE domain DGM85_05735 PF05598 Transposase domain (DUF772) DGM85_05745 PF12833 Helix-turn-helix domain DGM85_05745 PF02311 AraC-like ligand binding domain DGM85_05785 PF10544 T5orf172 domain DGM85_05800 PF00872 Transposase, Mutator family DGM85_05815 PF05598 Transposase domain (DUF772) DGM85_05815 PF01609 Transposase DDE domain DGM85_05840 PF00872 Transposase, Mutator family DGM85_05850 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system DGM85_05880 PF00872 Transposase, Mutator family DGM85_05945 PF00872 Transposase, Mutator family DGM85_05955 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DGM85_05955 PF00128 Alpha amylase, catalytic domain DGM85_05960 PF08443 RimK-like ATP-grasp domain DGM85_05960 PF18030 RimK PreATP-grasp domain DGM85_05970 PF00072 Response regulator receiver domain DGM85_05970 PF00486 Transcriptional regulatory protein, C terminal DGM85_05975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM85_05975 PF00512 His Kinase A (phospho-acceptor) domain DGM85_05975 PF00989 PAS fold DGM85_05975 PF11808 Phosphate regulon sensor protein PhoR DGM85_05995 PF01121 Dephospho-CoA kinase DGM85_06000 PF06750 Bacterial Peptidase A24 N-terminal domain DGM85_06000 PF01478 Type IV leader peptidase family DGM85_06005 PF00482 Type II secretion system (T2SS), protein F DGM85_06010 PF00114 Pilin (bacterial filament) DGM85_06010 PF07963 Prokaryotic N-terminal methylation motif DGM85_06015 PF00114 Pilin (bacterial filament) DGM85_06015 PF07963 Prokaryotic N-terminal methylation motif DGM85_06020 PF00437 Type II/IV secretion system protein DGM85_06020 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DGM85_06030 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DGM85_06030 PF00437 Type II/IV secretion system protein DGM85_06040 PF00072 Response regulator receiver domain DGM85_06040 PF02954 Bacterial regulatory protein, Fis family DGM85_06040 PF00158 Sigma-54 interaction domain DGM85_06045 PF00512 His Kinase A (phospho-acceptor) domain DGM85_06045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM85_06050 PF00549 CoA-ligase DGM85_06050 PF08442 ATP-grasp domain DGM85_06055 PF02629 CoA binding domain DGM85_06055 PF00549 CoA-ligase DGM85_06070 PF00872 Transposase, Mutator family DGM85_06080 PF00795 Carbon-nitrogen hydrolase DGM85_06080 PF02540 NAD synthase DGM85_06090 PF13525 Outer membrane lipoprotein DGM85_06095 PF00849 RNA pseudouridylate synthase DGM85_06100 PF02578 Multi-copper polyphenol oxidoreductase laccase DGM85_06110 PF04134 Protein of unknown function, DUF393 DGM85_06115 PF00672 HAMP domain DGM85_06115 PF02203 Tar ligand binding domain homologue DGM85_06115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGM85_06140 PF00982 Glycosyltransferase family 20 DGM85_06145 PF00723 Glycosyl hydrolases family 15 DGM85_06150 PF02358 Trehalose-phosphatase DGM85_06155 PF07715 TonB-dependent Receptor Plug Domain DGM85_06155 PF00593 TonB dependent receptor DGM85_06190 PF01541 GIY-YIG catalytic domain DGM85_06200 PF10431 C-terminal, D2-small domain, of ClpB protein DGM85_06200 PF02861 Clp amino terminal domain, pathogenicity island component DGM85_06200 PF17871 AAA lid domain DGM85_06200 PF07724 AAA domain (Cdc48 subfamily) DGM85_06200 PF00004 ATPase family associated with various cellular activities (AAA) DGM85_06210 PF00593 TonB dependent receptor DGM85_06210 PF07715 TonB-dependent Receptor Plug Domain DGM85_06225 PF12557 Cob(I)alamin adenosyltransferase N terminal DGM85_06225 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP DGM85_06230 PF03186 CobD/Cbib protein DGM85_06230 PF17113 Regulatory signalling modulator protein AmpE DGM85_06235 PF00155 Aminotransferase class I and II DGM85_06240 PF07685 CobB/CobQ-like glutamine amidotransferase domain DGM85_06240 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DGM85_06245 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase DGM85_06250 PF02277 Phosphoribosyltransferase DGM85_06260 PF02654 Cobalamin-5-phosphate synthase DGM85_06270 PF00872 Transposase, Mutator family DGM85_06285 PF00872 Transposase, Mutator family DGM85_06290 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DGM85_06290 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DGM85_06295 PF04183 IucA / IucC family DGM85_06295 PF06276 Ferric iron reductase FhuF-like transporter DGM85_06300 PF07690 Major Facilitator Superfamily DGM85_06305 PF04183 IucA / IucC family DGM85_06305 PF06276 Ferric iron reductase FhuF-like transporter DGM85_06315 PF07660 Secretin and TonB N terminus short domain DGM85_06315 PF07715 TonB-dependent Receptor Plug Domain DGM85_06315 PF00593 TonB dependent receptor DGM85_06340 PF00999 Sodium/hydrogen exchanger family DGM85_06340 PF02254 TrkA-N domain DGM85_06355 PF00593 TonB dependent receptor DGM85_06355 PF07715 TonB-dependent Receptor Plug Domain DGM85_06360 PF07715 TonB-dependent Receptor Plug Domain DGM85_06360 PF00593 TonB dependent receptor DGM85_06370 PF07715 TonB-dependent Receptor Plug Domain DGM85_06370 PF00593 TonB dependent receptor DGM85_06375 PF00005 ABC transporter DGM85_06375 PF12848 ABC transporter DGM85_06385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM85_06385 PF03466 LysR substrate binding domain DGM85_06395 PF13472 GDSL-like Lipase/Acylhydrolase family DGM85_06395 PF07859 alpha/beta hydrolase fold DGM85_06405 PF04185 Phosphoesterase family DGM85_06405 PF05506 Domain of unknown function (DUF756) DGM85_06420 PF07690 Major Facilitator Superfamily DGM85_06435 PF01336 OB-fold nucleic acid binding domain DGM85_06435 PF02938 GAD domain DGM85_06435 PF00152 tRNA synthetases class II (D, K and N) DGM85_06450 PF01709 Transcriptional regulator DGM85_06455 PF02075 Crossover junction endodeoxyribonuclease RuvC DGM85_06460 PF01330 RuvA N terminal domain DGM85_06460 PF07499 RuvA, C-terminal domain DGM85_06465 PF02705 K+ potassium transporter DGM85_06475 PF17864 RuvB AAA lid domain DGM85_06475 PF05491 RuvB C-terminal winged helix domain DGM85_06475 PF05496 Holliday junction DNA helicase RuvB P-loop domain DGM85_06480 PF03061 Thioesterase superfamily DGM85_06485 PF01618 MotA/TolQ/ExbB proton channel family DGM85_06490 PF02472 Biopolymer transport protein ExbD/TolR DGM85_06500 PF04052 TolB amino-terminal domain DGM85_06500 PF07676 WD40-like Beta Propeller Repeat DGM85_06505 PF00691 OmpA family DGM85_06515 PF04055 Radical SAM superfamily DGM85_06525 PF06508 Queuosine biosynthesis protein QueC DGM85_06530 PF13426 PAS domain DGM85_06530 PF13581 Histidine kinase-like ATPase domain DGM85_06530 PF07536 HWE histidine kinase DGM85_06540 PF03466 LysR substrate binding domain DGM85_06540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM85_06550 PF00872 Transposase, Mutator family DGM85_06560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGM85_06560 PF00672 HAMP domain DGM85_06560 PF02203 Tar ligand binding domain homologue DGM85_06605 PF00270 DEAD/DEAH box helicase DGM85_06605 PF16124 RecQ zinc-binding DGM85_06605 PF00570 HRDC domain DGM85_06605 PF00271 Helicase conserved C-terminal domain DGM85_06605 PF09382 RQC domain DGM85_06610 PF00210 Ferritin-like domain DGM85_06615 PF00271 Helicase conserved C-terminal domain DGM85_06615 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold DGM85_06615 PF11898 Domain of unknown function (DUF3418) DGM85_06615 PF04408 Helicase associated domain (HA2) DGM85_06615 PF00270 DEAD/DEAH box helicase DGM85_06645 PF02685 Glucokinase DGM85_06660 PF04055 Radical SAM superfamily DGM85_06660 PF13186 Iron-sulfur cluster-binding domain DGM85_06665 PF05402 Coenzyme PQQ synthesis protein D (PqqD) DGM85_06670 PF03070 TENA/THI-4/PQQC family DGM85_06675 PF12706 Beta-lactamase superfamily domain DGM85_06685 PF13291 ACT domain DGM85_06685 PF04607 Region found in RelA / SpoT proteins DGM85_06685 PF02824 TGS domain DGM85_06705 PF00535 Glycosyl transferase family 2 DGM85_06710 PF00912 Transglycosylase DGM85_06710 PF00905 Penicillin binding protein transpeptidase domain DGM85_06710 PF14814 Bifunctional transglycosylase second domain DGM85_06720 PF04851 Type III restriction enzyme, res subunit DGM85_06720 PF13307 Helicase C-terminal domain DGM85_06725 PF00814 Glycoprotease family DGM85_06730 PF03747 ADP-ribosylglycohydrolase DGM85_06740 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain DGM85_06740 PF02951 Prokaryotic glutathione synthetase, N-terminal domain DGM85_06745 PF00072 Response regulator receiver domain DGM85_06750 PF00072 Response regulator receiver domain DGM85_06755 PF01584 CheW-like domain DGM85_06760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGM85_06760 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term DGM85_06765 PF02895 Signal transducing histidine kinase, homodimeric domain DGM85_06765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM85_06765 PF01627 Hpt domain DGM85_06765 PF00072 Response regulator receiver domain DGM85_06765 PF01584 CheW-like domain DGM85_06780 PF13302 Acetyltransferase (GNAT) domain DGM85_06800 PF03932 CutC family DGM85_06840 PF01301 Glycosyl hydrolases family 35 DGM85_06845 PF17678 Glycosyl hydrolase family 92 N-terminal domain DGM85_06845 PF07971 Glycosyl hydrolase family 92 DGM85_06855 PF14310 Fibronectin type III-like domain DGM85_06855 PF00933 Glycosyl hydrolase family 3 N terminal domain DGM85_06855 PF01915 Glycosyl hydrolase family 3 C-terminal domain DGM85_06855 PF07691 PA14 domain DGM85_06870 PF00704 Glycosyl hydrolases family 18 DGM85_06870 PF01476 LysM domain DGM85_06900 PF02685 Glucokinase DGM85_06905 PF04452 RNA methyltransferase DGM85_06910 PF00202 Aminotransferase class-III DGM85_06915 PF00293 NUDIX domain DGM85_06920 PF00459 Inositol monophosphatase family DGM85_06925 PF03819 MazG nucleotide pyrophosphohydrolase domain DGM85_06930 PF02694 Uncharacterised BCR, YnfA/UPF0060 family DGM85_06935 PF01145 SPFH domain / Band 7 family DGM85_06935 PF16200 C-terminal region of band_7 DGM85_06945 PF01571 Aminomethyltransferase folate-binding domain DGM85_06945 PF08669 Glycine cleavage T-protein C-terminal barrel domain DGM85_06950 PF01597 Glycine cleavage H-protein DGM85_06985 PF00872 Transposase, Mutator family DGM85_07035 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 DGM85_07035 PF16355 Domain of unknown function (DUF4982) DGM85_07035 PF02837 Glycosyl hydrolases family 2, sugar binding domain DGM85_07035 PF00703 Glycosyl hydrolases family 2 DGM85_07035 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DGM85_07040 PF07745 Glycosyl hydrolase family 53 DGM85_07050 PF01381 Helix-turn-helix DGM85_07050 PF06114 IrrE N-terminal-like domain DGM85_07050 PF09856 Predicted transcriptional regulator (DUF2083) DGM85_07055 PF00171 Aldehyde dehydrogenase family DGM85_07060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DGM85_07060 PF02770 Acyl-CoA dehydrogenase, middle domain DGM85_07060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DGM85_07065 PF00378 Enoyl-CoA hydratase/isomerase DGM85_07070 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DGM85_07070 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DGM85_07070 PF00378 Enoyl-CoA hydratase/isomerase DGM85_07075 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DGM85_07075 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DGM85_07080 PF01545 Cation efflux family DGM85_07090 PF13181 Tetratricopeptide repeat DGM85_07100 PF13181 Tetratricopeptide repeat DGM85_07105 PF07715 TonB-dependent Receptor Plug Domain DGM85_07105 PF00593 TonB dependent receptor DGM85_07110 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DGM85_07110 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DGM85_07110 PF00378 Enoyl-CoA hydratase/isomerase DGM85_07115 PF04542 Sigma-70 region 2 DGM85_07115 PF08281 Sigma-70, region 4 DGM85_07125 PF13180 PDZ domain DGM85_07135 PF06421 GTP-binding protein LepA C-terminus DGM85_07135 PF03144 Elongation factor Tu domain 2 DGM85_07135 PF00679 Elongation factor G C-terminus DGM85_07135 PF00009 Elongation factor Tu GTP binding domain DGM85_07140 PF10502 Signal peptidase, peptidase S26 DGM85_07150 PF14622 Ribonuclease-III-like DGM85_07150 PF00035 Double-stranded RNA binding motif DGM85_07155 PF01926 50S ribosome-binding GTPase DGM85_07155 PF07650 KH domain DGM85_07160 PF11967 Recombination protein O N terminal DGM85_07160 PF02565 Recombination protein O C terminal DGM85_07170 PF05958 tRNA (Uracil-5-)-methyltransferase DGM85_07175 PF01928 CYTH domain DGM85_07180 PF01323 DSBA-like thioredoxin domain DGM85_07185 PF01593 Flavin containing amine oxidoreductase DGM85_07190 PF04244 Deoxyribodipyrimidine photo-lyase-related protein DGM85_07195 PF00933 Glycosyl hydrolase family 3 N terminal domain DGM85_07200 PF00156 Phosphoribosyl transferase domain DGM85_07205 PF01048 Phosphorylase superfamily DGM85_07210 PF00313 'Cold-shock' DNA-binding domain DGM85_07215 PF01494 FAD binding domain DGM85_07225 PF08494 DEAD/H associated DGM85_07225 PF00271 Helicase conserved C-terminal domain DGM85_07225 PF00270 DEAD/DEAH box helicase DGM85_07230 PF04679 ATP dependent DNA ligase C terminal region DGM85_07230 PF01068 ATP dependent DNA ligase domain DGM85_07230 PF04675 DNA ligase N terminus DGM85_07240 PF01068 ATP dependent DNA ligase domain DGM85_07240 PF04679 ATP dependent DNA ligase C terminal region DGM85_07240 PF04675 DNA ligase N terminus DGM85_07260 PF00990 Diguanylate cyclase, GGDEF domain DGM85_07260 PF00072 Response regulator receiver domain DGM85_07280 PF00108 Thiolase, N-terminal domain DGM85_07280 PF02803 Thiolase, C-terminal domain DGM85_07285 PF03797 Autotransporter beta-domain DGM85_07285 PF00082 Subtilase family DGM85_07285 PF12951 Passenger-associated-transport-repeat DGM85_07290 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DGM85_07290 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DGM85_07300 PF01863 Protein of unknown function DUF45 DGM85_07305 PF07043 Protein of unknown function (DUF1328) DGM85_07315 PF01258 Prokaryotic dksA/traR C4-type zinc finger DGM85_07340 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DGM85_07350 PF03831 PhnA domain DGM85_07350 PF08274 PhnA Zinc-Ribbon DGM85_07360 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DGM85_07365 PF07690 Major Facilitator Superfamily DGM85_07400 PF09924 Uncharacterised conserved protein (DUF2156) DGM85_07400 PF03706 Lysylphosphatidylglycerol synthase TM region DGM85_07410 PF01042 Endoribonuclease L-PSP DGM85_07455 PF04545 Sigma-70, region 4 DGM85_07455 PF04542 Sigma-70 region 2 DGM85_07470 PF04060 Putative Fe-S cluster DGM85_07485 PF01588 Putative tRNA binding domain DGM85_07485 PF09334 tRNA synthetases class I (M) DGM85_07505 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DGM85_07520 PF00324 Amino acid permease DGM85_07525 PF02574 Homocysteine S-methyltransferase DGM85_07535 PF02592 Putative vitamin uptake transporter DGM85_07555 PF03551 Transcriptional regulator PadR-like family DGM85_07575 PF03653 Uncharacterised protein family (UPF0093) DGM85_07590 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DGM85_07595 PF01336 OB-fold nucleic acid binding domain DGM85_07595 PF14579 Helix-hairpin-helix motif DGM85_07595 PF02811 PHP domain DGM85_07595 PF07733 Bacterial DNA polymerase III alpha NTPase domain DGM85_07595 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DGM85_07600 PF01351 Ribonuclease HII DGM85_07605 PF02684 Lipid-A-disaccharide synthetase DGM85_07610 PF00132 Bacterial transferase hexapeptide (six repeats) DGM85_07610 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DGM85_07615 PF07977 FabA-like domain DGM85_07620 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD DGM85_07620 PF00132 Bacterial transferase hexapeptide (six repeats) DGM85_07630 PF01103 Surface antigen DGM85_07630 PF07244 Surface antigen variable number repeat DGM85_07635 PF17820 PDZ domain DGM85_07635 PF02163 Peptidase family M50 DGM85_07640 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DGM85_07640 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DGM85_07640 PF13288 DXP reductoisomerase C-terminal domain DGM85_07650 PF01255 Putative undecaprenyl diphosphate synthase DGM85_07655 PF01765 Ribosome recycling factor DGM85_07660 PF00696 Amino acid kinase family DGM85_07665 PF00072 Response regulator receiver domain DGM85_07665 PF00990 Diguanylate cyclase, GGDEF domain DGM85_07670 PF00889 Elongation factor TS DGM85_07675 PF00318 Ribosomal protein S2 DGM85_07710 PF00557 Metallopeptidase family M24 DGM85_07715 PF01966 HD domain DGM85_07715 PF08335 GlnD PII-uridylyltransferase DGM85_07715 PF01909 Nucleotidyltransferase domain DGM85_07720 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal DGM85_07720 PF00132 Bacterial transferase hexapeptide (six repeats) DGM85_07720 PF14602 Hexapeptide repeat of succinyl-transferase DGM85_07725 PF03960 ArsC family DGM85_07730 PF07687 Peptidase dimerisation domain DGM85_07730 PF01546 Peptidase family M20/M25/M40 DGM85_07735 PF00733 Asparagine synthase DGM85_07735 PF13537 Glutamine amidotransferase domain DGM85_07745 PF07715 TonB-dependent Receptor Plug Domain DGM85_07745 PF00593 TonB dependent receptor DGM85_07750 PF01804 Penicillin amidase DGM85_07755 PF00210 Ferritin-like domain DGM85_07765 PF00872 Transposase, Mutator family DGM85_07770 PF00521 DNA gyrase/topoisomerase IV, subunit A DGM85_07770 PF03989 DNA gyrase C-terminal domain, beta-propeller DGM85_07795 PF00872 Transposase, Mutator family DGM85_07830 PF02321 Outer membrane efflux protein DGM85_07835 PF00529 HlyD membrane-fusion protein of T1SS DGM85_07835 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DGM85_07840 PF07690 Major Facilitator Superfamily DGM85_07860 PF14310 Fibronectin type III-like domain DGM85_07860 PF00933 Glycosyl hydrolase family 3 N terminal domain DGM85_07860 PF01915 Glycosyl hydrolase family 3 C-terminal domain DGM85_07870 PF00854 POT family DGM85_07895 PF12802 MarR family DGM85_07900 PF01432 Peptidase family M3 DGM85_07905 PF00255 Glutathione peroxidase DGM85_07910 PF00970 Oxidoreductase FAD-binding domain DGM85_07910 PF00175 Oxidoreductase NAD-binding domain DGM85_07915 PF00005 ABC transporter DGM85_07920 PF05683 Fumarase C-terminus DGM85_07920 PF05681 Fumarate hydratase (Fumerase) DGM85_07935 PF00484 Carbonic anhydrase DGM85_07940 PF02253 Phospholipase A1 DGM85_07950 PF00313 'Cold-shock' DNA-binding domain DGM85_07965 PF00899 ThiF family DGM85_07970 PF01026 TatD related DNase DGM85_07985 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DGM85_07985 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DGM85_07985 PF02770 Acyl-CoA dehydrogenase, middle domain DGM85_07995 PF13417 Glutathione S-transferase, N-terminal domain DGM85_08005 PF00733 Asparagine synthase DGM85_08005 PF13537 Glutamine amidotransferase domain DGM85_08010 PF03358 NADPH-dependent FMN reductase DGM85_08015 PF00772 DnaB-like helicase N terminal domain DGM85_08015 PF03796 DnaB-like helicase C terminal domain DGM85_08020 PF00875 DNA photolyase DGM85_08020 PF03441 FAD binding domain of DNA photolyase DGM85_08025 PF00691 OmpA family DGM85_08025 PF05736 OprF membrane domain DGM85_08035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM85_08035 PF03466 LysR substrate binding domain DGM85_08050 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DGM85_08050 PF00529 HlyD membrane-fusion protein of T1SS DGM85_08055 PF00873 AcrB/AcrD/AcrF family DGM85_08060 PF00106 short chain dehydrogenase DGM85_08065 PF02321 Outer membrane efflux protein DGM85_08070 PF00990 Diguanylate cyclase, GGDEF domain DGM85_08080 PF00990 Diguanylate cyclase, GGDEF domain DGM85_08100 PF01668 SmpB protein DGM85_08105 PF03364 Polyketide cyclase / dehydrase and lipid transport DGM85_08110 PF03658 RnfH family Ubiquitin DGM85_08115 PF04355 SmpA / OmlA family DGM85_08120 PF01475 Ferric uptake regulator family DGM85_08125 PF02463 RecF/RecN/SMC N terminal domain DGM85_08130 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding DGM85_08130 PF01628 HrcA protein C terminal domain DGM85_08135 PF01025 GrpE DGM85_08140 PF00012 Hsp70 protein DGM85_08145 PF00684 DnaJ central domain DGM85_08145 PF01556 DnaJ C terminal domain DGM85_08145 PF00226 DnaJ domain DGM85_08150 PF08543 Phosphomethylpyrimidine kinase DGM85_08175 PF00664 ABC transporter transmembrane region DGM85_08175 PF00005 ABC transporter DGM85_08175 PF03412 Peptidase C39 family DGM85_08180 PF03466 LysR substrate binding domain DGM85_08180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM85_08190 PF00664 ABC transporter transmembrane region DGM85_08190 PF00005 ABC transporter DGM85_08195 PF01205 Uncharacterized protein family UPF0029 DGM85_08200 PF03641 Possible lysine decarboxylase DGM85_08205 PF07992 Pyridine nucleotide-disulphide oxidoreductase DGM85_08205 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DGM85_08210 PF02817 e3 binding domain DGM85_08210 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DGM85_08210 PF00364 Biotin-requiring enzyme DGM85_08215 PF16078 2-oxoglutarate dehydrogenase N-terminus DGM85_08215 PF02779 Transketolase, pyrimidine binding domain DGM85_08215 PF16870 2-oxoglutarate dehydrogenase C-terminal DGM85_08215 PF00676 Dehydrogenase E1 component DGM85_08225 PF08007 Cupin superfamily protein DGM85_08235 PF08328 Adenylosuccinate lyase C-terminal DGM85_08235 PF00206 Lyase DGM85_08250 PF00206 Lyase DGM85_08250 PF10415 Fumarase C C-terminus DGM85_08280 PF00005 ABC transporter DGM85_08285 PF00392 Bacterial regulatory proteins, gntR family DGM85_08295 PF00255 Glutathione peroxidase DGM85_08300 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DGM85_08300 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DGM85_08315 PF04102 SlyX DGM85_08335 PF00356 Bacterial regulatory proteins, lacI family DGM85_08340 PF07690 Major Facilitator Superfamily DGM85_08345 PF00294 pfkB family carbohydrate kinase DGM85_08355 PF02310 B12 binding domain DGM85_08355 PF02574 Homocysteine S-methyltransferase DGM85_08355 PF00809 Pterin binding enzyme DGM85_08355 PF02965 Vitamin B12 dependent methionine synthase, activation domain DGM85_08355 PF02607 B12 binding domain DGM85_08360 PF02574 Homocysteine S-methyltransferase DGM85_08360 PF00809 Pterin binding enzyme DGM85_08365 PF01209 ubiE/COQ5 methyltransferase family DGM85_08370 PF02770 Acyl-CoA dehydrogenase, middle domain DGM85_08370 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DGM85_08370 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DGM85_08375 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DGM85_08375 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DGM85_08375 PF02770 Acyl-CoA dehydrogenase, middle domain DGM85_08390 PF00575 S1 RNA binding domain DGM85_08390 PF00773 RNB domain DGM85_08390 PF08206 Ribonuclease B OB domain DGM85_08390 PF08461 Ribonuclease R winged-helix domain DGM85_08390 PF17876 Cold shock domain DGM85_08400 PF00588 SpoU rRNA Methylase family DGM85_08400 PF08032 RNA 2'-O ribose methyltransferase substrate binding DGM85_08415 PF00929 Exonuclease DGM85_08425 PF01895 PhoU domain DGM85_08430 PF00005 ABC transporter DGM85_08435 PF00528 Binding-protein-dependent transport system inner membrane component DGM85_08440 PF00528 Binding-protein-dependent transport system inner membrane component DGM85_08445 PF12849 PBP superfamily domain DGM85_08450 PF12849 PBP superfamily domain DGM85_08465 PF00484 Carbonic anhydrase DGM85_08470 PF01740 STAS domain DGM85_08470 PF00916 Sulfate permease family DGM85_08475 PF10576 Iron-sulfur binding domain of endonuclease III DGM85_08475 PF00633 Helix-hairpin-helix motif DGM85_08475 PF00730 HhH-GPD superfamily base excision DNA repair protein DGM85_08485 PF00378 Enoyl-CoA hydratase/isomerase DGM85_08490 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DGM85_08490 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DGM85_08495 PF00293 NUDIX domain DGM85_08500 PF00581 Rhodanese-like domain DGM85_08530 PF00005 ABC transporter DGM85_08530 PF16326 ABC transporter C-terminal domain DGM85_08530 PF12848 ABC transporter DGM85_08540 PF01170 Putative RNA methylase family UPF0020 DGM85_08540 PF10672 S-adenosylmethionine-dependent methyltransferase DGM85_08540 PF02926 THUMP domain DGM85_08545 PF01513 ATP-NAD kinase DGM85_08565 PF00929 Exonuclease DGM85_08565 PF08411 Exonuclease C-terminal DGM85_08575 PF01494 FAD binding domain DGM85_08580 PF00266 Aminotransferase class-V DGM85_08590 PF06052 3-hydroxyanthranilic acid dioxygenase DGM85_08595 PF00484 Carbonic anhydrase DGM85_08640 PF00072 Response regulator receiver domain DGM85_08640 PF00196 Bacterial regulatory proteins, luxR family DGM85_08675 PF01336 OB-fold nucleic acid binding domain DGM85_08675 PF00152 tRNA synthetases class II (D, K and N) DGM85_08685 PF01521 Iron-sulphur cluster biosynthesis DGM85_08690 PF01250 Ribosomal protein S6 DGM85_08695 PF01084 Ribosomal protein S18 DGM85_08700 PF01281 Ribosomal protein L9, N-terminal domain DGM85_08700 PF03948 Ribosomal protein L9, C-terminal domain DGM85_08705 PF02463 RecF/RecN/SMC N terminal domain DGM85_08710 PF04354 ZipA, C-terminal FtsZ-binding domain DGM85_08720 PF00155 Aminotransferase class I and II DGM85_08725 PF01653 NAD-dependent DNA ligase adenylation domain DGM85_08725 PF12826 Helix-hairpin-helix motif DGM85_08725 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DGM85_08725 PF03120 NAD-dependent DNA ligase OB-fold domain DGM85_08725 PF00533 BRCA1 C Terminus (BRCT) domain DGM85_08730 PF00152 tRNA synthetases class II (D, K and N) DGM85_08745 PF01008 Initiation factor 2 subunit family DGM85_08750 PF00521 DNA gyrase/topoisomerase IV, subunit A DGM85_08750 PF03989 DNA gyrase C-terminal domain, beta-propeller DGM85_08755 PF13360 PQQ-like domain DGM85_08765 PF17391 Urocanase N-terminal domain DGM85_08765 PF17392 Urocanase C-terminal domain DGM85_08765 PF01175 Urocanase Rossmann-like domain DGM85_08780 PF00221 Aromatic amino acid lyase DGM85_08785 PF07969 Amidohydrolase family DGM85_08800 PF00392 Bacterial regulatory proteins, gntR family DGM85_08800 PF07702 UTRA domain DGM85_08825 PF01794 Ferric reductase like transmembrane component DGM85_08830 PF00174 Oxidoreductase molybdopterin binding domain DGM85_08835 PF00266 Aminotransferase class-V DGM85_08840 PF01842 ACT domain DGM85_08840 PF01817 Chorismate mutase type II DGM85_08840 PF00800 Prephenate dehydratase DGM85_08845 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DGM85_08855 PF03544 Gram-negative bacterial TonB protein C-terminal DGM85_08860 PF02403 Seryl-tRNA synthetase N-terminal domain DGM85_08860 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DGM85_08865 PF02525 Flavodoxin-like fold DGM85_08870 PF03466 LysR substrate binding domain DGM85_08870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM85_08900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGM85_08900 PF02203 Tar ligand binding domain homologue DGM85_08900 PF00672 HAMP domain DGM85_08905 PF01494 FAD binding domain DGM85_08920 PF13426 PAS domain DGM85_08920 PF00072 Response regulator receiver domain DGM85_08920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM85_08930 PF06745 KaiC DGM85_08935 PF08448 PAS fold DGM85_08935 PF00512 His Kinase A (phospho-acceptor) domain DGM85_08935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM85_08935 PF00072 Response regulator receiver domain DGM85_08935 PF13188 PAS domain DGM85_08945 PF03918 Cytochrome C biogenesis protein DGM85_08950 PF08534 Redoxin DGM85_08960 PF03100 CcmE DGM85_08965 PF04995 Heme exporter protein D (CcmD) DGM85_08970 PF01578 Cytochrome C assembly protein DGM85_08975 PF00082 Subtilase family DGM85_08985 PF04542 Sigma-70 region 2 DGM85_08985 PF08281 Sigma-70, region 4 DGM85_09000 PF00034 Cytochrome c DGM85_09015 PF05523 WxcM-like, C-terminal DGM85_09035 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DGM85_09040 PF01943 Polysaccharide biosynthesis protein DGM85_09045 PF00535 Glycosyl transferase family 2 DGM85_09060 PF08241 Methyltransferase domain DGM85_09080 PF13579 Glycosyl transferase 4-like domain DGM85_09080 PF00534 Glycosyl transferases group 1 DGM85_09095 PF00005 ABC transporter DGM85_09100 PF00005 ABC transporter DGM85_09100 PF00664 ABC transporter transmembrane region DGM85_09110 PF00296 Luciferase-like monooxygenase DGM85_09125 PF03471 Transporter associated domain DGM85_09125 PF01595 Cyclin M transmembrane N-terminal domain DGM85_09125 PF00571 CBS domain DGM85_09140 PF01384 Phosphate transporter family DGM85_09155 PF00204 DNA gyrase B DGM85_09155 PF00986 DNA gyrase B subunit, carboxyl terminus DGM85_09155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM85_09155 PF01751 Toprim domain DGM85_09165 PF00117 Glutamine amidotransferase class-I DGM85_09165 PF06418 CTP synthase N-terminus DGM85_09170 PF00793 DAHP synthetase I family DGM85_09180 PF03952 Enolase, N-terminal domain DGM85_09180 PF00113 Enolase, C-terminal TIM barrel domain DGM85_09185 PF04977 Septum formation initiator DGM85_09190 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DGM85_09195 PF02542 YgbB family DGM85_09200 PF01142 tRNA pseudouridine synthase D (TruD) DGM85_09205 PF01713 Smr domain DGM85_09210 PF01975 Survival protein SurE DGM85_09220 PF09335 SNARE associated Golgi protein DGM85_09225 PF01476 LysM domain DGM85_09225 PF01551 Peptidase family M23 DGM85_09230 PF04430 Protein of unknown function (DUF498/DUF598) DGM85_09235 PF01985 CRS1 / YhbY (CRM) domain DGM85_09240 PF01728 FtsJ-like methyltransferase DGM85_09245 PF00004 ATPase family associated with various cellular activities (AAA) DGM85_09245 PF17862 AAA+ lid domain DGM85_09245 PF06480 FtsH Extracellular DGM85_09245 PF01434 Peptidase family M41 DGM85_09250 PF00809 Pterin binding enzyme DGM85_09260 PF17209 Hfq protein DGM85_09265 PF13167 GTP-binding GTPase N-terminal DGM85_09265 PF16360 GTP-binding GTPase Middle Region DGM85_09265 PF01926 50S ribosome-binding GTPase DGM85_09270 PF02464 Competence-damaged protein DGM85_09275 PF03109 ABC1 family DGM85_09280 PF01726 LexA DNA binding domain DGM85_09280 PF00717 Peptidase S24-like DGM85_09285 PF00154 recA bacterial DNA recombination protein DGM85_09295 PF02631 RecX family DGM85_09300 PF01411 tRNA synthetases class II (A) DGM85_09300 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DGM85_09300 PF02272 DHHA1 domain DGM85_09305 PF02599 Global regulator protein family DGM85_09315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGM85_09315 PF08447 PAS fold DGM85_09315 PF13426 PAS domain DGM85_09320 PF02678 Pirin DGM85_09320 PF17954 Quercetinase C-terminal cupin domain DGM85_09325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM85_09325 PF03466 LysR substrate binding domain DGM85_09350 PF08543 Phosphomethylpyrimidine kinase DGM85_09365 PF13638 PIN domain DGM85_09365 PF02562 PhoH-like protein DGM85_09370 PF00578 AhpC/TSA family DGM85_09385 PF00701 Dihydrodipicolinate synthetase family DGM85_09395 PF11953 Domain of unknown function (DUF3470) DGM85_09395 PF00037 4Fe-4S binding domain DGM85_09400 PF05035 2-keto-3-deoxy-galactonokinase DGM85_09405 PF08450 SMP-30/Gluconolactonase/LRE-like region DGM85_09410 PF13378 Enolase C-terminal domain-like DGM85_09410 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DGM85_09415 PF01081 KDPG and KHG aldolase DGM85_09425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM85_09425 PF03466 LysR substrate binding domain DGM85_09440 PF00942 Cellulose binding domain DGM85_09440 PF03442 Carbohydrate binding domain X2 DGM85_09455 PF16338 Domain of unknown function (DUF4968) DGM85_09455 PF01055 Glycosyl hydrolases family 31 DGM85_09455 PF17137 Domain of unknown function (DUF5110) DGM85_09465 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DGM85_09465 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DGM85_09475 PF00083 Sugar (and other) transporter DGM85_09490 PF00872 Transposase, Mutator family DGM85_09495 PF02649 Type I GTP cyclohydrolase folE2 DGM85_09510 PF01743 Poly A polymerase head domain DGM85_09510 PF12626 Polymerase A arginine-rich C-terminus DGM85_09510 PF12627 Probable RNA and SrmB- binding site of polymerase A DGM85_09515 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DGM85_09520 PF02548 Ketopantoate hydroxymethyltransferase DGM85_09525 PF02569 Pantoate-beta-alanine ligase DGM85_09530 PF02261 Aspartate decarboxylase DGM85_09535 PF00342 Phosphoglucose isomerase DGM85_09555 PF14310 Fibronectin type III-like domain DGM85_09555 PF01915 Glycosyl hydrolase family 3 C-terminal domain DGM85_09555 PF00933 Glycosyl hydrolase family 3 N terminal domain DGM85_09565 PF00474 Sodium:solute symporter family DGM85_09570 PF00563 EAL domain DGM85_09570 PF00360 Phytochrome region DGM85_09570 PF01590 GAF domain DGM85_09570 PF00990 Diguanylate cyclase, GGDEF domain DGM85_09575 PF00150 Cellulase (glycosyl hydrolase family 5) DGM85_09575 PF02013 Cellulose or protein binding domain DGM85_09580 PF00072 Response regulator receiver domain DGM85_09595 PF04551 GcpE protein DGM85_09600 PF01569 PAP2 superfamily DGM85_09605 PF07690 Major Facilitator Superfamily DGM85_09610 PF01177 Asp/Glu/Hydantoin racemase DGM85_09620 PF00892 EamA-like transporter family DGM85_09625 PF01565 FAD binding domain DGM85_09625 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DGM85_09630 PF01180 Dihydroorotate dehydrogenase DGM85_09650 PF00171 Aldehyde dehydrogenase family DGM85_09695 PF10566 Glycoside hydrolase 97 DGM85_09695 PF14508 Glycosyl-hydrolase 97 N-terminal DGM85_09695 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation DGM85_09710 PF00686 Starch binding domain DGM85_09710 PF00128 Alpha amylase, catalytic domain DGM85_09715 PF00356 Bacterial regulatory proteins, lacI family DGM85_09720 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DGM85_09720 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DGM85_09720 PF02824 TGS domain DGM85_09720 PF03129 Anticodon binding domain DGM85_09725 PF05198 Translation initiation factor IF-3, N-terminal domain DGM85_09725 PF00707 Translation initiation factor IF-3, C-terminal domain DGM85_09730 PF01632 Ribosomal protein L35 DGM85_09735 PF00453 Ribosomal protein L20 DGM85_09740 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DGM85_09740 PF01409 tRNA synthetases class II core domain (F) DGM85_09745 PF03483 B3/4 domain DGM85_09745 PF03484 tRNA synthetase B5 domain DGM85_09745 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DGM85_09745 PF01588 Putative tRNA binding domain DGM85_09745 PF03147 Ferredoxin-fold anticodon binding domain DGM85_09750 PF00216 Bacterial DNA-binding protein DGM85_09755 PF13411 MerR HTH family regulatory protein DGM85_09775 PF02397 Bacterial sugar transferase DGM85_09795 PF00534 Glycosyl transferases group 1 DGM85_09795 PF13439 Glycosyltransferase Family 4 DGM85_09805 PF14667 Polysaccharide biosynthesis C-terminal domain DGM85_09820 PF03808 Glycosyl transferase WecB/TagA/CpsF family DGM85_09835 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DGM85_09835 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DGM85_09845 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family DGM85_09865 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DGM85_09865 PF02779 Transketolase, pyrimidine binding domain DGM85_09865 PF02780 Transketolase, C-terminal domain DGM85_09875 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DGM85_09875 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DGM85_09875 PF12806 Acetyl-CoA dehydrogenase C-terminal like DGM85_09875 PF02770 Acyl-CoA dehydrogenase, middle domain DGM85_09885 PF08212 Lipocalin-like domain DGM85_09915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM85_09915 PF00072 Response regulator receiver domain DGM85_09915 PF13426 PAS domain DGM85_09930 PF04362 Bacterial Fe(2+) trafficking DGM85_09935 PF14815 NUDIX domain DGM85_09935 PF10576 Iron-sulfur binding domain of endonuclease III DGM85_09935 PF00633 Helix-hairpin-helix motif DGM85_09935 PF00730 HhH-GPD superfamily base excision DNA repair protein DGM85_09945 PF00448 SRP54-type protein, GTPase domain DGM85_09945 PF02881 SRP54-type protein, helical bundle domain DGM85_09955 PF05544 Proline racemase DGM85_09960 PF01266 FAD dependent oxidoreductase DGM85_09970 PF04324 BFD-like [2Fe-2S] binding domain DGM85_09970 PF07992 Pyridine nucleotide-disulphide oxidoreductase DGM85_09975 PF00701 Dihydrodipicolinate synthetase family DGM85_09980 PF00171 Aldehyde dehydrogenase family DGM85_09985 PF00557 Metallopeptidase family M24 DGM85_09985 PF01321 Creatinase/Prolidase N-terminal domain DGM85_10005 PF13520 Amino acid permease DGM85_10040 PF09286 Pro-kumamolisin, activation domain DGM85_10040 PF00082 Subtilase family DGM85_10055 PF07715 TonB-dependent Receptor Plug Domain DGM85_10055 PF00593 TonB dependent receptor DGM85_10070 PF07532 Bacterial Ig-like domain (group 4) DGM85_10080 PF07715 TonB-dependent Receptor Plug Domain DGM85_10080 PF00593 TonB dependent receptor DGM85_10100 PF01527 Transposase DGM85_10130 PF00872 Transposase, Mutator family DGM85_10140 PF00742 Homoserine dehydrogenase DGM85_10140 PF03447 Homoserine dehydrogenase, NAD binding domain DGM85_10140 PF00696 Amino acid kinase family DGM85_10140 PF13840 ACT domain DGM85_10140 PF01842 ACT domain DGM85_10145 PF08544 GHMP kinases C terminal DGM85_10145 PF00288 GHMP kinases N terminal domain DGM85_10155 PF07519 Tannase and feruloyl esterase DGM85_10165 PF00291 Pyridoxal-phosphate dependent enzyme DGM85_10165 PF14821 Threonine synthase N terminus DGM85_10175 PF13545 Crp-like helix-turn-helix domain DGM85_10175 PF00027 Cyclic nucleotide-binding domain DGM85_10180 PF13393 Histidyl-tRNA synthetase DGM85_10180 PF03129 Anticodon binding domain DGM85_10190 PF01634 ATP phosphoribosyltransferase DGM85_10190 PF08029 HisG, C-terminal domain DGM85_10195 PF00815 Histidinol dehydrogenase DGM85_10200 PF00155 Aminotransferase class I and II DGM85_10205 PF00475 Imidazoleglycerol-phosphate dehydratase DGM85_10210 PF00117 Glutamine amidotransferase class-I DGM85_10215 PF00977 Histidine biosynthesis protein DGM85_10220 PF00977 Histidine biosynthesis protein DGM85_10225 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DGM85_10225 PF01502 Phosphoribosyl-AMP cyclohydrolase DGM85_10245 PF03079 ARD/ARD' family DGM85_10250 PF00596 Class II Aldolase and Adducin N-terminal domain DGM85_10255 PF13520 Amino acid permease DGM85_10260 PF13520 Amino acid permease DGM85_10270 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DGM85_10270 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DGM85_10275 PF01565 FAD binding domain DGM85_10275 PF02913 FAD linked oxidases, C-terminal domain DGM85_10295 PF09285 Elongation factor P, C-terminal DGM85_10295 PF08207 Elongation factor P (EF-P) KOW-like domain DGM85_10295 PF01132 Elongation factor P (EF-P) OB domain DGM85_10300 PF00106 short chain dehydrogenase DGM85_10305 PF00682 HMGL-like DGM85_10315 PF00378 Enoyl-CoA hydratase/isomerase DGM85_10325 PF07664 Ferrous iron transport protein B C terminus DGM85_10325 PF07670 Nucleoside recognition DGM85_10325 PF02421 Ferrous iron transport protein B DGM85_10340 PF00155 Aminotransferase class I and II DGM85_10345 PF03473 MOSC domain DGM85_10345 PF03475 3-alpha domain DGM85_10350 PF05173 Dihydrodipicolinate reductase, C-terminus DGM85_10350 PF01113 Dihydrodipicolinate reductase, N-terminus DGM85_10355 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DGM85_10355 PF00117 Glutamine amidotransferase class-I DGM85_10365 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DGM85_10365 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DGM85_10365 PF02142 MGS-like domain DGM85_10370 PF01272 Transcription elongation factor, GreA/GreB, C-term DGM85_10370 PF03449 Transcription elongation factor, N-terminal DGM85_10380 PF02272 DHHA1 domain DGM85_10380 PF17768 RecJ OB domain DGM85_10380 PF01368 DHH family DGM85_10400 PF00152 tRNA synthetases class II (D, K and N) DGM85_10400 PF01336 OB-fold nucleic acid binding domain DGM85_10405 PF00072 Response regulator receiver domain DGM85_10410 PF00512 His Kinase A (phospho-acceptor) domain DGM85_10410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM85_10410 PF00072 Response regulator receiver domain DGM85_10410 PF01627 Hpt domain DGM85_10415 PF00072 Response regulator receiver domain DGM85_10415 PF01627 Hpt domain DGM85_10415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM85_10415 PF00512 His Kinase A (phospho-acceptor) domain DGM85_10420 PF00378 Enoyl-CoA hydratase/isomerase DGM85_10425 PF00501 AMP-binding enzyme DGM85_10425 PF13193 AMP-binding enzyme C-terminal domain DGM85_10440 PF00330 Aconitase family (aconitate hydratase) DGM85_10440 PF00694 Aconitase C-terminal domain DGM85_10455 PF11791 Aconitate B N-terminal domain DGM85_10455 PF06434 Aconitate hydratase 2 N-terminus DGM85_10455 PF00330 Aconitase family (aconitate hydratase) DGM85_10460 PF00561 alpha/beta hydrolase fold DGM85_10465 PF00563 EAL domain DGM85_10465 PF00990 Diguanylate cyclase, GGDEF domain DGM85_10465 PF03707 Bacterial signalling protein N terminal repeat DGM85_10470 PF01339 CheB methylesterase DGM85_10470 PF00072 Response regulator receiver domain DGM85_10475 PF03975 CheD chemotactic sensory transduction DGM85_10480 PF01739 CheR methyltransferase, SAM binding domain DGM85_10480 PF03705 CheR methyltransferase, all-alpha domain DGM85_10485 PF02203 Tar ligand binding domain homologue DGM85_10485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGM85_10485 PF00672 HAMP domain DGM85_10495 PF01584 CheW-like domain DGM85_10500 PF07238 PilZ domain DGM85_10500 PF07317 Flagellar regulator YcgR DGM85_10510 PF02203 Tar ligand binding domain homologue DGM85_10510 PF00672 HAMP domain DGM85_10510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGM85_10515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGM85_10515 PF02203 Tar ligand binding domain homologue DGM85_10515 PF00672 HAMP domain DGM85_10520 PF00672 HAMP domain DGM85_10520 PF02203 Tar ligand binding domain homologue DGM85_10520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGM85_10525 PF02203 Tar ligand binding domain homologue DGM85_10525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGM85_10525 PF00672 HAMP domain DGM85_10530 PF02203 Tar ligand binding domain homologue DGM85_10530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGM85_10530 PF00672 HAMP domain DGM85_10545 PF02203 Tar ligand binding domain homologue DGM85_10545 PF00672 HAMP domain DGM85_10545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGM85_10550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGM85_10550 PF00672 HAMP domain DGM85_10550 PF02203 Tar ligand binding domain homologue DGM85_10555 PF00672 HAMP domain DGM85_10555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGM85_10560 PF02203 Tar ligand binding domain homologue DGM85_10560 PF00672 HAMP domain DGM85_10560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGM85_10575 PF00672 HAMP domain DGM85_10575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGM85_10575 PF02203 Tar ligand binding domain homologue DGM85_10580 PF08269 Cache domain DGM85_10580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGM85_10580 PF08269 Cache domain DGM85_10580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGM85_10590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGM85_10590 PF00672 HAMP domain DGM85_10590 PF02203 Tar ligand binding domain homologue DGM85_10600 PF01584 CheW-like domain DGM85_10600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM85_10600 PF09078 CheY binding DGM85_10600 PF01627 Hpt domain DGM85_10600 PF02895 Signal transducing histidine kinase, homodimeric domain DGM85_10605 PF00072 Response regulator receiver domain DGM85_10615 PF01584 CheW-like domain DGM85_10620 PF13614 AAA domain DGM85_10625 PF00691 OmpA family DGM85_10625 PF13677 Membrane MotB of proton-channel complex MotA/MotB DGM85_10630 PF01618 MotA/TolQ/ExbB proton channel family DGM85_10670 PF01584 CheW-like domain DGM85_10670 PF00072 Response regulator receiver domain DGM85_10670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM85_10670 PF01627 Hpt domain DGM85_10670 PF02895 Signal transducing histidine kinase, homodimeric domain DGM85_10675 PF04344 Chemotaxis phosphatase, CheZ DGM85_10680 PF00072 Response regulator receiver domain DGM85_10685 PF04545 Sigma-70, region 4 DGM85_10685 PF04539 Sigma-70 region 3 DGM85_10685 PF04542 Sigma-70 region 2 DGM85_10690 PF10609 NUBPL iron-transfer P-loop NTPase DGM85_10695 PF00448 SRP54-type protein, GTPase domain DGM85_10700 PF00771 FHIPEP family DGM85_10705 PF01312 FlhB HrpN YscU SpaS Family DGM85_10715 PF00563 EAL domain DGM85_10715 PF00990 Diguanylate cyclase, GGDEF domain DGM85_10715 PF03707 Bacterial signalling protein N terminal repeat DGM85_10720 PF00990 Diguanylate cyclase, GGDEF domain DGM85_10725 PF05598 Transposase domain (DUF772) DGM85_10725 PF01609 Transposase DDE domain DGM85_10730 PF00990 Diguanylate cyclase, GGDEF domain DGM85_10735 PF01311 Bacterial export proteins, family 1 DGM85_10740 PF01313 Bacterial export proteins, family 3 DGM85_10750 PF00813 FliP family DGM85_10755 PF04347 Flagellar biosynthesis protein, FliO DGM85_10760 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DGM85_10765 PF02154 Flagellar motor switch protein FliM DGM85_10765 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DGM85_10785 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DGM85_10785 PF18269 T3SS EscN ATPase C-terminal domain DGM85_10795 PF01706 FliG C-terminal domain DGM85_10795 PF14841 FliG middle domain DGM85_10795 PF14842 FliG N-terminal domain DGM85_10800 PF01514 Secretory protein of YscJ/FliF family DGM85_10800 PF08345 Flagellar M-ring protein C-terminal DGM85_10805 PF02049 Flagellar hook-basal body complex protein FliE DGM85_10810 PF00534 Glycosyl transferases group 1 DGM85_10810 PF00535 Glycosyl transferase family 2 DGM85_10825 PF00872 Transposase, Mutator family DGM85_10840 PF02348 Cytidylyltransferase DGM85_10850 PF00872 Transposase, Mutator family DGM85_10885 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DGM85_10885 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DGM85_10895 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DGM85_10900 PF06490 Flagellar regulatory protein FleQ DGM85_10900 PF02954 Bacterial regulatory protein, Fis family DGM85_10900 PF00158 Sigma-54 interaction domain DGM85_10905 PF01339 CheB methylesterase DGM85_10905 PF00072 Response regulator receiver domain DGM85_10910 PF04552 Sigma-54, DNA binding domain DGM85_10910 PF00309 Sigma-54 factor, Activator interacting domain (AID) DGM85_10910 PF04963 Sigma-54 factor, core binding domain DGM85_10915 PF00196 Bacterial regulatory proteins, luxR family DGM85_10915 PF00072 Response regulator receiver domain DGM85_10930 PF02561 Flagellar protein FliS DGM85_10935 PF07196 Flagellin hook IN motif DGM85_10935 PF07195 Flagellar hook-associated protein 2 C-terminus DGM85_10935 PF02465 Flagellar hook-associated protein 2 N-terminus DGM85_10940 PF00700 Bacterial flagellin C-terminal helical region DGM85_10940 PF00669 Bacterial flagellin N-terminal helical region DGM85_10945 PF00700 Bacterial flagellin C-terminal helical region DGM85_10945 PF00669 Bacterial flagellin N-terminal helical region DGM85_10950 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DGM85_10950 PF07196 Flagellin hook IN motif DGM85_10955 PF10135 Rod binding protein DGM85_10955 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DGM85_10960 PF02119 Flagellar P-ring protein DGM85_10965 PF02107 Flagellar L-ring protein DGM85_10970 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DGM85_10970 PF00460 Flagella basal body rod protein DGM85_10975 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DGM85_10975 PF00460 Flagella basal body rod protein DGM85_10980 PF00460 Flagella basal body rod protein DGM85_10980 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DGM85_10980 PF07559 Flagellar basal body protein FlaE DGM85_10985 PF03963 Flagellar hook capping protein - N-terminal region DGM85_10990 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DGM85_10990 PF00460 Flagella basal body rod protein DGM85_11000 PF00072 Response regulator receiver domain DGM85_11000 PF01584 CheW-like domain DGM85_11020 PF00989 PAS fold DGM85_11020 PF13188 PAS domain DGM85_11020 PF13426 PAS domain DGM85_11020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM85_11020 PF00512 His Kinase A (phospho-acceptor) domain DGM85_11025 PF00563 EAL domain DGM85_11025 PF03707 Bacterial signalling protein N terminal repeat DGM85_11025 PF00990 Diguanylate cyclase, GGDEF domain DGM85_11030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM85_11030 PF07730 Histidine kinase DGM85_11035 PF00990 Diguanylate cyclase, GGDEF domain DGM85_11035 PF03707 Bacterial signalling protein N terminal repeat DGM85_11035 PF00563 EAL domain DGM85_11045 PF12729 Four helix bundle sensory module for signal transduction DGM85_11045 PF00672 HAMP domain DGM85_11045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGM85_11050 PF04356 Protein of unknown function (DUF489) DGM85_11060 PF00293 NUDIX domain DGM85_11065 PF02617 ATP-dependent Clp protease adaptor protein ClpS DGM85_11070 PF00004 ATPase family associated with various cellular activities (AAA) DGM85_11070 PF07724 AAA domain (Cdc48 subfamily) DGM85_11070 PF17871 AAA lid domain DGM85_11070 PF10431 C-terminal, D2-small domain, of ClpB protein DGM85_11070 PF02861 Clp amino terminal domain, pathogenicity island component DGM85_11075 PF01176 Translation initiation factor 1A / IF-1 DGM85_11080 PF03588 Leucyl/phenylalanyl-tRNA protein transferase DGM85_11090 PF07992 Pyridine nucleotide-disulphide oxidoreductase DGM85_11095 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DGM85_11095 PF17854 FtsK alpha domain DGM85_11095 PF09397 Ftsk gamma domain DGM85_11095 PF01580 FtsK/SpoIIIE family DGM85_11105 PF03548 Outer membrane lipoprotein carrier protein LolA DGM85_11120 PF16193 AAA C-terminal domain DGM85_11120 PF00004 ATPase family associated with various cellular activities (AAA) DGM85_11120 PF12002 MgsA AAA+ ATPase C terminal DGM85_11125 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DGM85_11130 PF00108 Thiolase, N-terminal domain DGM85_11130 PF02803 Thiolase, C-terminal domain DGM85_11135 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DGM85_11135 PF00378 Enoyl-CoA hydratase/isomerase DGM85_11135 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DGM85_11145 PF00334 Nucleoside diphosphate kinase DGM85_11150 PF04055 Radical SAM superfamily DGM85_11160 PF13464 Domain of unknown function (DUF4115) DGM85_11170 PF01011 PQQ enzyme repeat DGM85_11170 PF13360 PQQ-like domain DGM85_11175 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DGM85_11175 PF01926 50S ribosome-binding GTPase DGM85_11180 PF03454 MoeA C-terminal region (domain IV) DGM85_11180 PF03453 MoeA N-terminal region (domain I and II) DGM85_11180 PF00994 Probable molybdopterin binding domain DGM85_11185 PF00899 ThiF family DGM85_11215 PF00107 Zinc-binding dehydrogenase DGM85_11215 PF08240 Alcohol dehydrogenase GroES-like domain DGM85_11215 PF13823 Alcohol dehydrogenase GroES-associated DGM85_11225 PF00872 Transposase, Mutator family DGM85_11240 PF03372 Endonuclease/Exonuclease/phosphatase family DGM85_11250 PF00994 Probable molybdopterin binding domain DGM85_11250 PF03454 MoeA C-terminal region (domain IV) DGM85_11250 PF03453 MoeA N-terminal region (domain I and II) DGM85_11255 PF12804 MobA-like NTP transferase domain DGM85_11280 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DGM85_11280 PF10414 Sirohaem synthase dimerisation region DGM85_11280 PF14824 Sirohaem biosynthesis protein central DGM85_11285 PF03861 ANTAR domain DGM85_11285 PF00072 Response regulator receiver domain DGM85_11300 PF07690 Major Facilitator Superfamily DGM85_11305 PF18267 Rubredoxin NAD+ reductase C-terminal domain DGM85_11305 PF04324 BFD-like [2Fe-2S] binding domain DGM85_11305 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DGM85_11305 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DGM85_11305 PF07992 Pyridine nucleotide-disulphide oxidoreductase DGM85_11315 PF04324 BFD-like [2Fe-2S] binding domain DGM85_11315 PF00384 Molybdopterin oxidoreductase DGM85_11315 PF01568 Molydopterin dinucleotide binding domain DGM85_11315 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DGM85_11320 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DGM85_11330 PF05974 Domain of unknown function (DUF892) DGM85_11350 PF00563 EAL domain DGM85_11350 PF00990 Diguanylate cyclase, GGDEF domain DGM85_11350 PF08447 PAS fold DGM85_11350 PF08448 PAS fold DGM85_11355 PF12951 Passenger-associated-transport-repeat DGM85_11355 PF12951 Passenger-associated-transport-repeat DGM85_11360 PF00072 Response regulator receiver domain DGM85_11360 PF00196 Bacterial regulatory proteins, luxR family DGM85_11365 PF00512 His Kinase A (phospho-acceptor) domain DGM85_11365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM85_11365 PF08448 PAS fold DGM85_11365 PF13426 PAS domain DGM85_11365 PF00072 Response regulator receiver domain DGM85_11375 PF00873 AcrB/AcrD/AcrF family DGM85_11380 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DGM85_11390 PF03797 Autotransporter beta-domain DGM85_11390 PF00082 Subtilase family DGM85_11405 PF07995 Glucose / Sorbosone dehydrogenase DGM85_11410 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DGM85_11420 PF09335 SNARE associated Golgi protein DGM85_11425 PF01494 FAD binding domain DGM85_11440 PF00872 Transposase, Mutator family DGM85_11470 PF00034 Cytochrome c DGM85_11480 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DGM85_11485 PF00873 AcrB/AcrD/AcrF family DGM85_11490 PF00873 AcrB/AcrD/AcrF family DGM85_11500 PF01081 KDPG and KHG aldolase DGM85_11505 PF00920 Dehydratase family DGM85_11510 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DGM85_11515 PF02685 Glucokinase DGM85_11520 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DGM85_11520 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DGM85_11525 PF17912 MalK OB fold domain DGM85_11525 PF00005 ABC transporter DGM85_11530 PF01571 Aminomethyltransferase folate-binding domain DGM85_11540 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DGM85_11545 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DGM85_11550 PF00890 FAD binding domain DGM85_11550 PF02910 Fumarate reductase flavoprotein C-term DGM85_11560 PF13085 2Fe-2S iron-sulfur cluster binding domain DGM85_11565 PF03937 Flavinator of succinate dehydrogenase DGM85_11575 PF12704 MacB-like periplasmic core domain DGM85_11575 PF02687 FtsX-like permease family DGM85_11580 PF00005 ABC transporter DGM85_11590 PF03772 Competence protein DGM85_11590 PF00753 Metallo-beta-lactamase superfamily DGM85_11595 PF01618 MotA/TolQ/ExbB proton channel family DGM85_11605 PF00664 ABC transporter transmembrane region DGM85_11605 PF00005 ABC transporter DGM85_11610 PF02606 Tetraacyldisaccharide-1-P 4'-kinase DGM85_11615 PF02348 Cytidylyltransferase DGM85_11620 PF01451 Low molecular weight phosphotyrosine protein phosphatase DGM85_11630 PF08459 UvrC Helix-hairpin-helix N-terminal DGM85_11630 PF01541 GIY-YIG catalytic domain DGM85_11630 PF02151 UvrB/uvrC motif DGM85_11635 PF01066 CDP-alcohol phosphatidyltransferase DGM85_11660 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DGM85_11660 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DGM85_11660 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DGM85_11670 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DGM85_11680 PF17773 UPF0176 acylphosphatase like domain DGM85_11680 PF00581 Rhodanese-like domain DGM85_11685 PF00072 Response regulator receiver domain DGM85_11685 PF00196 Bacterial regulatory proteins, luxR family DGM85_11690 PF00872 Transposase, Mutator family DGM85_11695 PF01609 Transposase DDE domain DGM85_11695 PF05598 Transposase domain (DUF772) DGM85_11705 PF00849 RNA pseudouridylate synthase DGM85_11705 PF01479 S4 domain DGM85_11710 PF11737 Protein of unknown function (DUF3300) DGM85_11715 PF02535 ZIP Zinc transporter DGM85_11725 PF01329 Pterin 4 alpha carbinolamine dehydratase DGM85_11730 PF01106 NifU-like domain DGM85_11750 PF04143 Sulphur transport DGM85_11755 PF00753 Metallo-beta-lactamase superfamily DGM85_11785 PF17091 Inovirus G7P protein DGM85_11850 PF02303 Helix-destabilising protein DGM85_11870 PF00872 Transposase, Mutator family DGM85_11890 PF00072 Response regulator receiver domain DGM85_11890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM85_11890 PF00512 His Kinase A (phospho-acceptor) domain DGM85_11890 PF09308 LuxQ, periplasmic DGM85_11895 PF17674 HHH domain DGM85_11895 PF00575 S1 RNA binding domain DGM85_11895 PF09371 Tex-like protein N-terminal domain DGM85_11895 PF16921 Tex protein YqgF-like domain DGM85_11905 PF01266 FAD dependent oxidoreductase DGM85_11905 PF00355 Rieske [2Fe-2S] domain DGM85_11920 PF00561 alpha/beta hydrolase fold DGM85_11930 PF01066 CDP-alcohol phosphatidyltransferase DGM85_11950 PF03618 Kinase/pyrophosphorylase DGM85_11955 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DGM85_11955 PF02896 PEP-utilising enzyme, TIM barrel domain DGM85_11955 PF00391 PEP-utilising enzyme, mobile domain DGM85_11965 PF00929 Exonuclease DGM85_11970 PF14437 MafB19-like deaminase DGM85_11975 PF02742 Iron dependent repressor, metal binding and dimerisation domain DGM85_11975 PF01325 Iron dependent repressor, N-terminal DNA binding domain DGM85_11980 PF01566 Natural resistance-associated macrophage protein DGM85_11985 PF00561 alpha/beta hydrolase fold DGM85_12000 PF05977 Transmembrane secretion effector DGM85_12005 PF07969 Amidohydrolase family DGM85_12015 PF00857 Isochorismatase family DGM85_12035 PF00196 Bacterial regulatory proteins, luxR family DGM85_12035 PF00072 Response regulator receiver domain DGM85_12065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM85_12065 PF03466 LysR substrate binding domain DGM85_12070 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus DGM85_12070 PF00361 Proton-conducting membrane transporter DGM85_12070 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DGM85_12075 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) DGM85_12085 PF08240 Alcohol dehydrogenase GroES-like domain DGM85_12085 PF00107 Zinc-binding dehydrogenase DGM85_12090 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DGM85_12120 PF00872 Transposase, Mutator family DGM85_12155 PF00117 Glutamine amidotransferase class-I DGM85_12155 PF00958 GMP synthase C terminal domain DGM85_12155 PF02540 NAD synthase DGM85_12160 PF00478 IMP dehydrogenase / GMP reductase domain DGM85_12160 PF00571 CBS domain DGM85_12165 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DGM85_12165 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DGM85_12180 PF00999 Sodium/hydrogen exchanger family DGM85_12180 PF02254 TrkA-N domain DGM85_12185 PF00483 Nucleotidyl transferase DGM85_12190 PF02719 Polysaccharide biosynthesis protein DGM85_12195 PF00953 Glycosyl transferase family 4 DGM85_12200 PF18073 Rubredoxin metal binding domain DGM85_12210 PF00216 Bacterial DNA-binding protein DGM85_12215 PF00575 S1 RNA binding domain DGM85_12220 PF02224 Cytidylate kinase DGM85_12225 PF00444 Ribosomal protein L36 DGM85_12235 PF04371 Porphyromonas-type peptidyl-arginine deiminase DGM85_12240 PF00795 Carbon-nitrogen hydrolase DGM85_12265 PF00528 Binding-protein-dependent transport system inner membrane component DGM85_12270 PF00528 Binding-protein-dependent transport system inner membrane component DGM85_12290 PF00356 Bacterial regulatory proteins, lacI family DGM85_12305 PF03795 YCII-related domain DGM85_12310 PF02616 Segregation and condensation protein ScpA DGM85_12315 PF04079 Segregation and condensation complex subunit ScpB DGM85_12320 PF01479 S4 domain DGM85_12320 PF00849 RNA pseudouridylate synthase DGM85_12335 PF00795 Carbon-nitrogen hydrolase DGM85_12340 PF00155 Aminotransferase class I and II DGM85_12345 PF00005 ABC transporter DGM85_12350 PF03379 CcmB protein DGM85_12355 PF01578 Cytochrome C assembly protein DGM85_12365 PF03100 CcmE DGM85_12370 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal DGM85_12370 PF01578 Cytochrome C assembly protein DGM85_12375 PF08534 Redoxin DGM85_12380 PF03918 Cytochrome C biogenesis protein DGM85_12395 PF00561 alpha/beta hydrolase fold DGM85_12405 PF00005 ABC transporter DGM85_12405 PF00664 ABC transporter transmembrane region DGM85_12410 PF00005 ABC transporter DGM85_12410 PF00664 ABC transporter transmembrane region DGM85_12415 PF01654 Cytochrome bd terminal oxidase subunit I DGM85_12420 PF02322 Cytochrome bd terminal oxidase subunit II DGM85_12440 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DGM85_12440 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain DGM85_12450 PF00171 Aldehyde dehydrogenase family DGM85_12455 PF01472 PUA domain DGM85_12455 PF00696 Amino acid kinase family DGM85_12465 PF00206 Lyase DGM85_12470 PF01118 Semialdehyde dehydrogenase, NAD binding domain DGM85_12480 PF00696 Amino acid kinase family DGM85_12480 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase DGM85_12485 PF07687 Peptidase dimerisation domain DGM85_12485 PF01546 Peptidase family M20/M25/M40 DGM85_12495 PF00764 Arginosuccinate synthase DGM85_12500 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DGM85_12500 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DGM85_12510 PF09190 DALR domain DGM85_12510 PF01406 tRNA synthetases class I (C) catalytic domain DGM85_12515 PF02657 Fe-S metabolism associated domain DGM85_12525 PF01258 Prokaryotic dksA/traR C4-type zinc finger DGM85_12530 PF01809 Putative membrane protein insertion efficiency factor DGM85_12535 PF01979 Amidohydrolase family DGM85_12540 PF08460 Bacterial SH3 domain DGM85_12540 PF01551 Peptidase family M23 DGM85_12550 PF00872 Transposase, Mutator family DGM85_12565 PF06751 Ethanolamine ammonia lyase large subunit (EutB) DGM85_12570 PF05985 Ethanolamine ammonia-lyase light chain (EutC) DGM85_12580 PF00753 Metallo-beta-lactamase superfamily DGM85_12600 PF05598 Transposase domain (DUF772) DGM85_12600 PF01609 Transposase DDE domain DGM85_12610 PF00295 Glycosyl hydrolases family 28 DGM85_12630 PF13419 Haloacid dehalogenase-like hydrolase DGM85_12640 PF01979 Amidohydrolase family DGM85_12650 PF01132 Elongation factor P (EF-P) OB domain DGM85_12650 PF09285 Elongation factor P, C-terminal DGM85_12650 PF08207 Elongation factor P (EF-P) KOW-like domain DGM85_12655 PF04055 Radical SAM superfamily DGM85_12660 PF00563 EAL domain DGM85_12660 PF00990 Diguanylate cyclase, GGDEF domain DGM85_12660 PF03707 Bacterial signalling protein N terminal repeat DGM85_12660 PF13188 PAS domain DGM85_12670 PF00588 SpoU rRNA Methylase family DGM85_12675 PF00459 Inositol monophosphatase family DGM85_12680 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DGM85_12680 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DGM85_12685 PF00545 ribonuclease DGM85_12695 PF16326 ABC transporter C-terminal domain DGM85_12695 PF12848 ABC transporter DGM85_12695 PF00005 ABC transporter DGM85_12700 PF00270 DEAD/DEAH box helicase DGM85_12700 PF03880 DbpA RNA binding domain DGM85_12700 PF00271 Helicase conserved C-terminal domain DGM85_12705 PF00156 Phosphoribosyl transferase domain DGM85_12710 PF02696 Uncharacterized ACR, YdiU/UPF0061 family DGM85_12715 PF00135 Carboxylesterase family DGM85_12735 PF00872 Transposase, Mutator family DGM85_12750 PF14497 Glutathione S-transferase, C-terminal domain DGM85_12750 PF02798 Glutathione S-transferase, N-terminal domain DGM85_12755 PF00313 'Cold-shock' DNA-binding domain DGM85_12765 PF07152 YaeQ protein DGM85_12775 PF00990 Diguanylate cyclase, GGDEF domain DGM85_12775 PF00563 EAL domain DGM85_12775 PF00072 Response regulator receiver domain DGM85_12780 PF01435 Peptidase family M48 DGM85_12785 PF00749 tRNA synthetases class I (E and Q), catalytic domain DGM85_12790 PF00106 short chain dehydrogenase DGM85_12795 PF05233 PHB accumulation regulatory domain DGM85_12795 PF07879 PHB/PHA accumulation regulator DNA-binding domain DGM85_12815 PF01119 DNA mismatch repair protein, C-terminal domain DGM85_12815 PF08676 MutL C terminal dimerisation domain DGM85_12820 PF01520 N-acetylmuramoyl-L-alanine amidase DGM85_12820 PF11741 AMIN domain DGM85_12825 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DGM85_12830 PF01256 Carbohydrate kinase DGM85_12830 PF03853 YjeF-related protein N-terminus DGM85_12835 PF08331 Domain of unknown function (DUF1730) DGM85_12840 PF02601 Exonuclease VII, large subunit DGM85_12840 PF13742 OB-fold nucleic acid binding domain DGM85_12855 PF03781 Sulfatase-modifying factor enzyme 1 DGM85_12870 PF01612 3'-5' exonuclease DGM85_12870 PF00570 HRDC domain DGM85_12875 PF04679 ATP dependent DNA ligase C terminal region DGM85_12875 PF01068 ATP dependent DNA ligase domain DGM85_12875 PF13298 DNA polymerase Ligase (LigD) DGM85_12900 PF01584 CheW-like domain DGM85_12905 PF00672 HAMP domain DGM85_12905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGM85_12905 PF02203 Tar ligand binding domain homologue DGM85_12935 PF04386 Stringent starvation protein B DGM85_12940 PF00043 Glutathione S-transferase, C-terminal domain DGM85_12940 PF02798 Glutathione S-transferase, N-terminal domain DGM85_12945 PF02167 Cytochrome C1 family DGM85_12950 PF00032 Cytochrome b(C-terminal)/b6/petD DGM85_12950 PF00033 Cytochrome b/b6/petB DGM85_12955 PF00355 Rieske [2Fe-2S] domain DGM85_12955 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal DGM85_12965 PF01464 Transglycosylase SLT domain DGM85_12980 PF00919 Uncharacterized protein family UPF0004 DGM85_12980 PF01938 TRAM domain DGM85_12980 PF04055 Radical SAM superfamily DGM85_12985 PF02562 PhoH-like protein DGM85_12995 PF02130 Uncharacterized protein family UPF0054 DGM85_13005 PF03471 Transporter associated domain DGM85_13005 PF00571 CBS domain DGM85_13020 PF00171 Aldehyde dehydrogenase family DGM85_13025 PF00528 Binding-protein-dependent transport system inner membrane component DGM85_13030 PF00528 Binding-protein-dependent transport system inner membrane component DGM85_13035 PF08402 TOBE domain DGM85_13035 PF00005 ABC transporter DGM85_13040 PF02321 Outer membrane efflux protein DGM85_13045 PF07690 Major Facilitator Superfamily DGM85_13050 PF13533 Biotin-lipoyl like DGM85_13055 PF13416 Bacterial extracellular solute-binding protein DGM85_13060 PF00202 Aminotransferase class-III DGM85_13065 PF00120 Glutamine synthetase, catalytic domain DGM85_13070 PF07722 Peptidase C26 DGM85_13075 PF00120 Glutamine synthetase, catalytic domain DGM85_13080 PF01266 FAD dependent oxidoreductase DGM85_13085 PF00072 Response regulator receiver domain DGM85_13085 PF00990 Diguanylate cyclase, GGDEF domain DGM85_13090 PF01814 Hemerythrin HHE cation binding domain DGM85_13095 PF07690 Major Facilitator Superfamily DGM85_13095 PF00083 Sugar (and other) transporter DGM85_13105 PF00384 Molybdopterin oxidoreductase DGM85_13110 PF02634 FdhD/NarQ family DGM85_13115 PF07690 Major Facilitator Superfamily DGM85_13130 PF00202 Aminotransferase class-III DGM85_13140 PF04286 Protein of unknown function (DUF445) DGM85_13145 PF01627 Hpt domain DGM85_13145 PF00512 His Kinase A (phospho-acceptor) domain DGM85_13145 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DGM85_13145 PF00072 Response regulator receiver domain DGM85_13145 PF00672 HAMP domain DGM85_13145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM85_13150 PF00072 Response regulator receiver domain DGM85_13155 PF07690 Major Facilitator Superfamily DGM85_13160 PF02203 Tar ligand binding domain homologue DGM85_13160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGM85_13160 PF00672 HAMP domain DGM85_13195 PF05088 Bacterial NAD-glutamate dehydrogenase DGM85_13205 PF00529 HlyD membrane-fusion protein of T1SS DGM85_13205 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DGM85_13210 PF00873 AcrB/AcrD/AcrF family DGM85_13215 PF00356 Bacterial regulatory proteins, lacI family DGM85_13220 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DGM85_13220 PF02896 PEP-utilising enzyme, TIM barrel domain DGM85_13220 PF00381 PTS HPr component phosphorylation site DGM85_13220 PF05524 PEP-utilising enzyme, N-terminal DGM85_13220 PF00391 PEP-utilising enzyme, mobile domain DGM85_13225 PF00294 pfkB family carbohydrate kinase DGM85_13230 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DGM85_13250 PF00872 Transposase, Mutator family DGM85_13270 PF00872 Transposase, Mutator family DGM85_13280 PF07549 SecD/SecF GG Motif DGM85_13280 PF02355 Protein export membrane protein DGM85_13285 PF02355 Protein export membrane protein DGM85_13285 PF13721 SecD export protein N-terminal TM region DGM85_13285 PF07549 SecD/SecF GG Motif DGM85_13290 PF02699 Preprotein translocase subunit DGM85_13295 PF01702 Queuine tRNA-ribosyltransferase DGM85_13300 PF02547 Queuosine biosynthesis protein DGM85_13345 PF02927 Cellulase N-terminal ig-like domain DGM85_13345 PF00759 Glycosyl hydrolase family 9 DGM85_13355 PF00037 4Fe-4S binding domain DGM85_13370 PF01467 Cytidylyltransferase-like DGM85_13380 PF00183 Hsp90 protein DGM85_13380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM85_13395 PF03421 YopJ Serine/Threonine acetyltransferase DGM85_13445 PF03135 CagE, TrbE, VirB family, component of type IV transporter system DGM85_13450 PF05101 Type IV secretory pathway, VirB3-like protein DGM85_13460 PF01464 Transglycosylase SLT domain DGM85_13465 PF00437 Type II/IV secretion system protein DGM85_13470 PF03743 Bacterial conjugation TrbI-like protein DGM85_13490 PF02534 Type IV secretory system Conjugative DNA transfer DGM85_13505 PF00271 Helicase conserved C-terminal domain DGM85_13505 PF04851 Type III restriction enzyme, res subunit DGM85_13505 PF17757 UvrB interaction domain DGM85_13505 PF12344 Ultra-violet resistance protein B DGM85_13505 PF02151 UvrB/uvrC motif DGM85_13600 PF01555 DNA methylase DGM85_13655 PF00182 Chitinase class I DGM85_13765 PF07963 Prokaryotic N-terminal methylation motif DGM85_13765 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor DGM85_13770 PF05567 Neisseria PilC beta-propeller domain DGM85_13795 PF07694 5TMR of 5TMR-LYT DGM85_13795 PF06580 Histidine kinase DGM85_13800 PF11892 Domain of unknown function (DUF3412) DGM85_13800 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases DGM85_13800 PF03641 Possible lysine decarboxylase DGM85_13805 PF00593 TonB dependent receptor DGM85_13815 PF01914 MarC family integral membrane protein DGM85_13825 PF00462 Glutaredoxin DGM85_13830 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DGM85_13830 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DGM85_13835 PF02222 ATP-grasp domain DGM85_13835 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DGM85_13840 PF00731 AIR carboxylase DGM85_13850 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DGM85_13850 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DGM85_13860 PF00013 KH domain DGM85_13860 PF00575 S1 RNA binding domain DGM85_13860 PF03725 3' exoribonuclease family, domain 2 DGM85_13860 PF01138 3' exoribonuclease family, domain 1 DGM85_13860 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DGM85_13865 PF00312 Ribosomal protein S15 DGM85_13870 PF16198 tRNA pseudouridylate synthase B C-terminal domain DGM85_13870 PF01509 TruB family pseudouridylate synthase (N terminal domain) DGM85_13870 PF09157 Pseudouridine synthase II TruB, C-terminal DGM85_13875 PF02033 Ribosome-binding factor A DGM85_13880 PF00009 Elongation factor Tu GTP binding domain DGM85_13880 PF04760 Translation initiation factor IF-2, N-terminal region DGM85_13880 PF08364 Bacterial translation initiation factor IF-2 associated region DGM85_13880 PF11987 Translation-initiation factor 2 DGM85_13885 PF13184 NusA-like KH domain DGM85_13885 PF00575 S1 RNA binding domain DGM85_13885 PF08529 NusA N-terminal domain DGM85_13890 PF02576 RimP N-terminal domain DGM85_13890 PF17384 RimP C-terminal SH3 domain DGM85_13900 PF00361 Proton-conducting membrane transporter DGM85_13905 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus DGM85_13905 PF00361 Proton-conducting membrane transporter DGM85_13910 PF00361 Proton-conducting membrane transporter DGM85_13910 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DGM85_13915 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DGM85_13920 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DGM85_13925 PF12838 4Fe-4S dicluster domain DGM85_13930 PF00146 NADH dehydrogenase DGM85_13935 PF00384 Molybdopterin oxidoreductase DGM85_13935 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DGM85_13935 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal DGM85_13940 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DGM85_13940 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DGM85_13940 PF10531 SLBB domain DGM85_13950 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DGM85_13955 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DGM85_13960 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DGM85_13965 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DGM85_13980 PF00121 Triosephosphate isomerase DGM85_13985 PF00106 short chain dehydrogenase DGM85_14000 PF00563 EAL domain DGM85_14000 PF00990 Diguanylate cyclase, GGDEF domain DGM85_14000 PF03707 Bacterial signalling protein N terminal repeat DGM85_14015 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DGM85_14015 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DGM85_14015 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DGM85_14015 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DGM85_14020 PF01039 Carboxyl transferase domain DGM85_14020 PF17848 Acetyl-coA carboxylase zinc finger domain DGM85_14025 PF00290 Tryptophan synthase alpha chain DGM85_14035 PF00291 Pyridoxal-phosphate dependent enzyme DGM85_14040 PF03466 LysR substrate binding domain DGM85_14040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM85_14045 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DGM85_14050 PF01416 tRNA pseudouridine synthase DGM85_14065 PF02774 Semialdehyde dehydrogenase, dimerisation domain DGM85_14065 PF01118 Semialdehyde dehydrogenase, NAD binding domain DGM85_14070 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DGM85_14070 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DGM85_14075 PF01264 Chorismate synthase DGM85_14080 PF05175 Methyltransferase small domain DGM85_14085 PF02630 SCO1/SenC DGM85_14090 PF02666 Phosphatidylserine decarboxylase DGM85_14100 PF05872 Bacterial protein of unknown function (DUF853) DGM85_14125 PF01272 Transcription elongation factor, GreA/GreB, C-term DGM85_14125 PF03449 Transcription elongation factor, N-terminal DGM85_14130 PF18693 TRAM domain DGM85_14130 PF00919 Uncharacterized protein family UPF0004 DGM85_14130 PF04055 Radical SAM superfamily DGM85_14135 PF01738 Dienelactone hydrolase family DGM85_14155 PF00692 dUTPase DGM85_14165 PF10609 NUBPL iron-transfer P-loop NTPase DGM85_14170 PF07715 TonB-dependent Receptor Plug Domain DGM85_14170 PF00593 TonB dependent receptor DGM85_14205 PF05649 Peptidase family M13 DGM85_14205 PF01431 Peptidase family M13 DGM85_14230 PF07992 Pyridine nucleotide-disulphide oxidoreductase DGM85_14230 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DGM85_14235 PF01266 FAD dependent oxidoreductase DGM85_14240 PF04235 Protein of unknown function (DUF418) DGM85_14245 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DGM85_14250 PF00877 NlpC/P60 family DGM85_14255 PF00877 NlpC/P60 family DGM85_14270 PF00375 Sodium:dicarboxylate symporter family DGM85_14275 PF00245 Alkaline phosphatase DGM85_14285 PF01171 PP-loop family DGM85_14285 PF09179 TilS substrate binding domain DGM85_14285 PF11734 TilS substrate C-terminal domain DGM85_14290 PF02609 Exonuclease VII small subunit DGM85_14295 PF00348 Polyprenyl synthetase DGM85_14300 PF14521 Lysine-specific metallo-endopeptidase DGM85_14310 PF01523 Putative modulator of DNA gyrase DGM85_14315 PF04751 Protein of unknown function (DUF615) DGM85_14320 PF01523 Putative modulator of DNA gyrase DGM85_14330 PF13502 AsmA-like C-terminal region DGM85_14330 PF13116 Protein of unknown function DGM85_14335 PF00575 S1 RNA binding domain DGM85_14335 PF10150 Ribonuclease E/G family DGM85_14340 PF02545 Maf-like protein DGM85_14345 PF04402 Protein of unknown function (DUF541) DGM85_14360 PF02590 Predicted SPOUT methyltransferase DGM85_14375 PF01467 Cytidylyltransferase-like DGM85_14395 PF13603 Leucyl-tRNA synthetase, Domain 2 DGM85_14395 PF00133 tRNA synthetases class I (I, L, M and V) DGM85_14395 PF08264 Anticodon-binding domain of tRNA DGM85_14405 PF00085 Thioredoxin DGM85_14425 PF07043 Protein of unknown function (DUF1328) DGM85_14430 PF04070 Domain of unknown function (DUF378) DGM85_14435 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DGM85_14445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM85_14445 PF03466 LysR substrate binding domain DGM85_14450 PF01022 Bacterial regulatory protein, arsR family DGM85_14485 PF00664 ABC transporter transmembrane region DGM85_14485 PF00005 ABC transporter DGM85_14495 PF00873 AcrB/AcrD/AcrF family DGM85_14510 PF02321 Outer membrane efflux protein DGM85_14515 PF00072 Response regulator receiver domain DGM85_14515 PF00486 Transcriptional regulatory protein, C terminal DGM85_14520 PF00512 His Kinase A (phospho-acceptor) domain DGM85_14520 PF00672 HAMP domain DGM85_14520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM85_14525 PF00999 Sodium/hydrogen exchanger family DGM85_14530 PF00144 Beta-lactamase DGM85_14535 PF03737 Aldolase/RraA DGM85_14550 PF00990 Diguanylate cyclase, GGDEF domain DGM85_14555 PF01479 S4 domain DGM85_14555 PF00849 RNA pseudouridylate synthase DGM85_14560 PF00563 EAL domain DGM85_14560 PF08448 PAS fold DGM85_14560 PF00990 Diguanylate cyclase, GGDEF domain DGM85_14565 PF00270 DEAD/DEAH box helicase DGM85_14565 PF00271 Helicase conserved C-terminal domain DGM85_14565 PF03880 DbpA RNA binding domain DGM85_14570 PF04542 Sigma-70 region 2 DGM85_14570 PF08281 Sigma-70, region 4 DGM85_14615 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DGM85_14615 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DGM85_14625 PF00654 Voltage gated chloride channel DGM85_14630 PF08240 Alcohol dehydrogenase GroES-like domain DGM85_14630 PF00107 Zinc-binding dehydrogenase DGM85_14645 PF00593 TonB dependent receptor DGM85_14645 PF07715 TonB-dependent Receptor Plug Domain DGM85_14670 PF01483 Proprotein convertase P-domain DGM85_14670 PF00082 Subtilase family DGM85_14680 PF00082 Subtilase family DGM85_14680 PF01483 Proprotein convertase P-domain DGM85_14690 PF00248 Aldo/keto reductase family DGM85_14695 PF07690 Major Facilitator Superfamily DGM85_14700 PF03466 LysR substrate binding domain DGM85_14700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM85_14710 PF06719 AraC-type transcriptional regulator N-terminus DGM85_14710 PF12833 Helix-turn-helix domain DGM85_14720 PF16859 Tetracyclin repressor-like, C-terminal domain DGM85_14720 PF00440 Bacterial regulatory proteins, tetR family DGM85_14725 PF02321 Outer membrane efflux protein DGM85_14730 PF00873 AcrB/AcrD/AcrF family DGM85_14735 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DGM85_14735 PF00529 HlyD membrane-fusion protein of T1SS DGM85_14745 PF01475 Ferric uptake regulator family DGM85_14750 PF00749 tRNA synthetases class I (E and Q), catalytic domain DGM85_14775 PF06123 Inner membrane protein CreD DGM85_14790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM85_14790 PF00512 His Kinase A (phospho-acceptor) domain DGM85_14790 PF00672 HAMP domain DGM85_14795 PF00072 Response regulator receiver domain DGM85_14795 PF00486 Transcriptional regulatory protein, C terminal DGM85_14800 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ DGM85_14810 PF02559 CarD-like/TRCF domain DGM85_14810 PF00271 Helicase conserved C-terminal domain DGM85_14810 PF03461 TRCF domain DGM85_14810 PF17757 UvrB interaction domain DGM85_14810 PF00270 DEAD/DEAH box helicase DGM85_14820 PF02895 Signal transducing histidine kinase, homodimeric domain DGM85_14820 PF09078 CheY binding DGM85_14820 PF01627 Hpt domain DGM85_14820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM85_14820 PF01584 CheW-like domain DGM85_14825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DGM85_14825 PF00672 HAMP domain DGM85_14825 PF02203 Tar ligand binding domain homologue DGM85_14830 PF01584 CheW-like domain DGM85_14835 PF00563 EAL domain DGM85_14835 PF00990 Diguanylate cyclase, GGDEF domain DGM85_14835 PF13426 PAS domain DGM85_14840 PF01739 CheR methyltransferase, SAM binding domain DGM85_14840 PF03705 CheR methyltransferase, all-alpha domain DGM85_14845 PF01339 CheB methylesterase DGM85_14845 PF00072 Response regulator receiver domain DGM85_14855 PF01431 Peptidase family M13 DGM85_14855 PF05649 Peptidase family M13 DGM85_14865 PF00300 Histidine phosphatase superfamily (branch 1) DGM85_14870 PF04493 Endonuclease V DGM85_14880 PF05726 Pirin C-terminal cupin domain DGM85_14880 PF02678 Pirin DGM85_14895 PF02678 Pirin DGM85_14895 PF05726 Pirin C-terminal cupin domain DGM85_14900 PF02554 Carbon starvation protein CstA DGM85_14900 PF13722 5TM C-terminal transporter carbon starvation CstA DGM85_14905 PF04328 Selenoprotein, putative DGM85_14920 PF12796 Ankyrin repeats (3 copies) DGM85_14960 PF02625 XdhC and CoxI family DGM85_14960 PF13478 XdhC Rossmann domain DGM85_14965 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DGM85_14965 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DGM85_14970 PF00941 FAD binding domain in molybdopterin dehydrogenase DGM85_14970 PF03450 CO dehydrogenase flavoprotein C-terminal domain DGM85_14975 PF01799 [2Fe-2S] binding domain DGM85_14975 PF10518 TAT (twin-arginine translocation) pathway signal sequence DGM85_14975 PF00111 2Fe-2S iron-sulfur cluster binding domain DGM85_14980 PF00698 Acyl transferase domain DGM85_14980 PF00107 Zinc-binding dehydrogenase DGM85_14980 PF16197 Ketoacyl-synthetase C-terminal extension DGM85_14980 PF00109 Beta-ketoacyl synthase, N-terminal domain DGM85_14980 PF02801 Beta-ketoacyl synthase, C-terminal domain DGM85_14980 PF08659 KR domain DGM85_14980 PF00550 Phosphopantetheine attachment site DGM85_14980 PF14765 Polyketide synthase dehydratase DGM85_14980 PF08240 Alcohol dehydrogenase GroES-like domain DGM85_14985 PF00990 Diguanylate cyclase, GGDEF domain DGM85_14985 PF00360 Phytochrome region DGM85_14985 PF01590 GAF domain DGM85_14985 PF00563 EAL domain DGM85_14990 PF00436 Single-strand binding protein family DGM85_14995 PF00348 Polyprenyl synthetase DGM85_15005 PF02875 Mur ligase family, glutamate ligase domain DGM85_15005 PF08245 Mur ligase middle domain DGM85_15020 PF00696 Amino acid kinase family DGM85_15020 PF01842 ACT domain DGM85_15025 PF02567 Phenazine biosynthesis-like protein DGM85_15030 PF02567 Phenazine biosynthesis-like protein DGM85_15040 PF02566 OsmC-like protein DGM85_15045 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DGM85_15045 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DGM85_15050 PF03652 Holliday junction resolvase DGM85_15055 PF02622 Uncharacterized ACR, COG1678 DGM85_15060 PF13687 Domain of unknown function (DUF4153) DGM85_15065 PF13673 Acetyltransferase (GNAT) domain DGM85_15065 PF13302 Acetyltransferase (GNAT) domain DGM85_15065 PF03352 Methyladenine glycosylase DGM85_15065 PF00117 Glutamine amidotransferase class-I DGM85_15065 PF00958 GMP synthase C terminal domain DGM85_15080 PF00437 Type II/IV secretion system protein DGM85_15085 PF00437 Type II/IV secretion system protein DGM85_15090 PF01168 Alanine racemase, N-terminal domain DGM85_15095 PF14748 Pyrroline-5-carboxylate reductase dimerisation DGM85_15095 PF03807 NADP oxidoreductase coenzyme F420-dependent DGM85_15105 PF01551 Peptidase family M23 DGM85_15125 PF01965 DJ-1/PfpI family DGM85_15135 PF02082 Transcriptional regulator DGM85_15140 PF01458 Uncharacterized protein family (UPF0051) DGM85_15145 PF00005 ABC transporter DGM85_15150 PF01458 Uncharacterized protein family (UPF0051) DGM85_15155 PF00266 Aminotransferase class-V DGM85_15165 PF00583 Acetyltransferase (GNAT) family DGM85_15170 PF00355 Rieske [2Fe-2S] domain DGM85_15175 PF07715 TonB-dependent Receptor Plug Domain DGM85_15175 PF00593 TonB dependent receptor DGM85_15180 PF13640 2OG-Fe(II) oxygenase superfamily DGM85_15180 PF18331 PKHD-type hydroxylase C-terminal domain DGM85_15205 PF02424 ApbE family DGM85_15210 PF00667 FAD binding domain DGM85_15210 PF00175 Oxidoreductase NAD-binding domain DGM85_15210 PF00258 Flavodoxin DGM85_15215 PF05962 HutD DGM85_15220 PF00872 Transposase, Mutator family DGM85_15230 PF07687 Peptidase dimerisation domain DGM85_15230 PF01546 Peptidase family M20/M25/M40 DGM85_15240 PF01636 Phosphotransferase enzyme family DGM85_15245 PF00483 Nucleotidyl transferase DGM85_15250 PF00308 Bacterial dnaA protein DGM85_15255 PF01594 AI-2E family transporter DGM85_15265 PF00586 AIR synthase related protein, N-terminal domain DGM85_15265 PF02769 AIR synthase related protein, C-terminal domain DGM85_15280 PF00551 Formyl transferase DGM85_15300 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DGM85_15305 PF01722 BolA-like protein DGM85_15310 PF00571 CBS domain DGM85_15310 PF01380 SIS domain DGM85_15325 PF03968 OstA-like protein DGM85_15330 PF00005 ABC transporter DGM85_15335 PF00309 Sigma-54 factor, Activator interacting domain (AID) DGM85_15335 PF04963 Sigma-54 factor, core binding domain DGM85_15335 PF04552 Sigma-54, DNA binding domain DGM85_15340 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DGM85_15345 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DGM85_15350 PF07475 HPr Serine kinase C-terminal domain DGM85_15350 PF02603 HPr Serine kinase N terminus DGM85_15355 PF03668 P-loop ATPase protein family DGM85_15370 PF00381 PTS HPr component phosphorylation site DGM85_15375 PF05524 PEP-utilising enzyme, N-terminal DGM85_15375 PF00391 PEP-utilising enzyme, mobile domain DGM85_15375 PF02896 PEP-utilising enzyme, TIM barrel domain DGM85_15385 PF01769 Divalent cation transporter DGM85_15385 PF00571 CBS domain DGM85_15385 PF03448 MgtE intracellular N domain DGM85_15390 PF00756 Putative esterase DGM85_15395 PF02322 Cytochrome bd terminal oxidase subunit II DGM85_15430 PF03743 Bacterial conjugation TrbI-like protein DGM85_15450 PF01751 Toprim domain DGM85_15450 PF01131 DNA topoisomerase DGM85_15455 PF03377 TAL effector repeat DGM85_15470 PF13406 Transglycosylase SLT domain DGM85_15550 PF01654 Cytochrome bd terminal oxidase subunit I DGM85_15560 PF00324 Amino acid permease DGM85_15580 PF00872 Transposase, Mutator family DGM85_15605 PF00561 alpha/beta hydrolase fold DGM85_15615 PF00196 Bacterial regulatory proteins, luxR family DGM85_15620 PF00324 Amino acid permease DGM85_15640 PF12706 Beta-lactamase superfamily domain DGM85_15645 PF04820 Tryptophan halogenase DGM85_15675 PF09278 MerR, DNA binding DGM85_15675 PF00376 MerR family regulatory protein DGM85_15680 PF07690 Major Facilitator Superfamily DGM85_15690 PF03738 Glutathionylspermidine synthase preATP-grasp DGM85_15715 PF04012 PspA/IM30 family DGM85_15725 PF01243 Pyridoxamine 5'-phosphate oxidase DGM85_15725 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region DGM85_15730 PF01202 Shikimate kinase DGM85_15735 PF01761 3-dehydroquinate synthase DGM85_15745 PF01208 Uroporphyrinogen decarboxylase (URO-D) DGM85_15750 PF07690 Major Facilitator Superfamily DGM85_15755 PF00512 His Kinase A (phospho-acceptor) domain DGM85_15755 PF17149 Periplasmic sensor domain found in signal transduction proteins DGM85_15755 PF00672 HAMP domain DGM85_15755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM85_15755 PF01627 Hpt domain DGM85_15755 PF00072 Response regulator receiver domain DGM85_15760 PF01627 Hpt domain DGM85_15760 PF00512 His Kinase A (phospho-acceptor) domain DGM85_15760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM85_15760 PF00072 Response regulator receiver domain DGM85_15760 PF17149 Periplasmic sensor domain found in signal transduction proteins DGM85_15760 PF00672 HAMP domain DGM85_15765 PF00672 HAMP domain DGM85_15765 PF00072 Response regulator receiver domain DGM85_15765 PF17149 Periplasmic sensor domain found in signal transduction proteins DGM85_15765 PF00512 His Kinase A (phospho-acceptor) domain DGM85_15765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM85_15765 PF01627 Hpt domain DGM85_15780 PF04264 YceI-like domain DGM85_15800 PF03313 Serine dehydratase alpha chain DGM85_15800 PF03315 Serine dehydratase beta chain DGM85_15805 PF00041 Fibronectin type III domain DGM85_15805 PF00704 Glycosyl hydrolases family 18 DGM85_15805 PF00553 Cellulose binding domain DGM85_15810 PF00696 Amino acid kinase family DGM85_15810 PF00742 Homoserine dehydrogenase DGM85_15810 PF03447 Homoserine dehydrogenase, NAD binding domain DGM85_15815 PF01053 Cys/Met metabolism PLP-dependent enzyme DGM85_15820 PF00561 alpha/beta hydrolase fold DGM85_15825 PF01551 Peptidase family M23 DGM85_15825 PF08525 Opacity-associated protein A N-terminal motif DGM85_15825 PF01476 LysM domain DGM85_15830 PF00009 Elongation factor Tu GTP binding domain DGM85_15830 PF16658 Class II release factor RF3, C-terminal domain DGM85_15835 PF03006 Haemolysin-III related DGM85_15840 PF05170 AsmA family DGM85_15845 PF00571 CBS domain DGM85_15845 PF00478 IMP dehydrogenase / GMP reductase domain DGM85_15850 PF00535 Glycosyl transferase family 2 DGM85_15855 PF00912 Transglycosylase DGM85_15860 PF01430 Hsp33 protein DGM85_15870 PF00593 TonB dependent receptor DGM85_15870 PF07715 TonB-dependent Receptor Plug Domain DGM85_15875 PF00440 Bacterial regulatory proteins, tetR family DGM85_15885 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DGM85_15885 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DGM85_15885 PF09317 Domain of unknown function (DUF1974) DGM85_15920 PF00488 MutS domain V DGM85_15920 PF05192 MutS domain III DGM85_15920 PF05188 MutS domain II DGM85_15920 PF01624 MutS domain I DGM85_15920 PF05190 MutS family domain IV DGM85_15930 PF00141 Peroxidase DGM85_15935 PF01479 S4 domain DGM85_15955 PF01554 MatE DGM85_15960 PF01245 Ribosomal protein L19 DGM85_15965 PF01746 tRNA (Guanine-1)-methyltransferase DGM85_15970 PF05239 PRC-barrel domain DGM85_15970 PF01782 RimM N-terminal domain DGM85_15975 PF00886 Ribosomal protein S16 DGM85_15980 PF01063 Amino-transferase class IV DGM85_15985 PF03060 Nitronate monooxygenase DGM85_15990 PF00448 SRP54-type protein, GTPase domain DGM85_15990 PF02881 SRP54-type protein, helical bundle domain DGM85_15990 PF02978 Signal peptide binding domain DGM85_15995 PF01578 Cytochrome C assembly protein DGM85_16000 PF01263 Aldose 1-epimerase DGM85_16005 PF06964 Alpha-L-arabinofuranosidase C-terminal domain DGM85_16010 PF00072 Response regulator receiver domain DGM85_16015 PF13426 PAS domain DGM85_16015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM85_16015 PF00072 Response regulator receiver domain DGM85_16020 PF00672 HAMP domain DGM85_16020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM85_16020 PF00512 His Kinase A (phospho-acceptor) domain DGM85_16020 PF01627 Hpt domain DGM85_16020 PF00072 Response regulator receiver domain DGM85_16020 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DGM85_16025 PF01739 CheR methyltransferase, SAM binding domain DGM85_16025 PF03705 CheR methyltransferase, all-alpha domain DGM85_16030 PF01339 CheB methylesterase DGM85_16035 PF02702 Osmosensitive K+ channel His kinase sensor domain DGM85_16035 PF00512 His Kinase A (phospho-acceptor) domain DGM85_16035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM85_16035 PF13492 GAF domain DGM85_16035 PF13493 Domain of unknown function (DUF4118) DGM85_16040 PF07237 Protein of unknown function (DUF1428) DGM85_16045 PF00085 Thioredoxin DGM85_16050 PF07715 TonB-dependent Receptor Plug Domain DGM85_16050 PF00593 TonB dependent receptor DGM85_16060 PF08448 PAS fold DGM85_16060 PF13188 PAS domain DGM85_16060 PF00072 Response regulator receiver domain DGM85_16060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM85_16060 PF00512 His Kinase A (phospho-acceptor) domain DGM85_16075 PF13581 Histidine kinase-like ATPase domain DGM85_16080 PF01740 STAS domain DGM85_16085 PF08678 Rsbr N terminal DGM85_16085 PF01740 STAS domain DGM85_16120 PF12833 Helix-turn-helix domain DGM85_16130 PF05656 Protein of unknown function (DUF805) DGM85_16135 PF18073 Rubredoxin metal binding domain DGM85_16145 PF03626 Prokaryotic Cytochrome C oxidase subunit IV DGM85_16150 PF00510 Cytochrome c oxidase subunit III DGM85_16155 PF00115 Cytochrome C and Quinol oxidase polypeptide I DGM85_16160 PF06481 COX Aromatic Rich Motif DGM85_16160 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DGM85_16170 PF02401 LytB protein DGM85_16175 PF01252 Signal peptidase (SPase) II DGM85_16180 PF08264 Anticodon-binding domain of tRNA DGM85_16180 PF00133 tRNA synthetases class I (I, L, M and V) DGM85_16180 PF06827 Zinc finger found in FPG and IleRS DGM85_16185 PF01687 Riboflavin kinase DGM85_16185 PF06574 FAD synthetase DGM85_16190 PF03023 Lipid II flippase MurJ DGM85_16195 PF01649 Ribosomal protein S20 DGM85_16200 PF01018 GTP1/OBG DGM85_16200 PF01926 50S ribosome-binding GTPase DGM85_16205 PF01016 Ribosomal L27 protein DGM85_16210 PF00829 Ribosomal prokaryotic L21 protein DGM85_16215 PF17760 UvrA interaction domain DGM85_16215 PF00005 ABC transporter DGM85_16215 PF17755 UvrA DNA-binding domain DGM85_16230 PF00378 Enoyl-CoA hydratase/isomerase DGM85_16245 PF04542 Sigma-70 region 2 DGM85_16245 PF08281 Sigma-70, region 4 DGM85_16260 PF04376 Arginine-tRNA-protein transferase, N terminus DGM85_16260 PF04377 Arginine-tRNA-protein transferase, C terminus DGM85_16270 PF02222 ATP-grasp domain DGM85_16300 PF00730 HhH-GPD superfamily base excision DNA repair protein DGM85_16315 PF00196 Bacterial regulatory proteins, luxR family DGM85_16315 PF00072 Response regulator receiver domain DGM85_16320 PF07730 Histidine kinase DGM85_16335 PF03775 Septum formation inhibitor MinC, C-terminal domain DGM85_16335 PF05209 Septum formation inhibitor MinC, N-terminal domain DGM85_16340 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DGM85_16345 PF03776 Septum formation topological specificity factor MinE DGM85_16355 PF08521 Two-component sensor kinase N-terminal DGM85_16355 PF00512 His Kinase A (phospho-acceptor) domain DGM85_16355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM85_16360 PF00072 Response regulator receiver domain DGM85_16360 PF00486 Transcriptional regulatory protein, C terminal DGM85_16375 PF00884 Sulfatase DGM85_16375 PF08019 Phosphoethanolamine transferase EptA/EptB DGM85_16385 PF01527 Transposase DGM85_16410 PF07690 Major Facilitator Superfamily DGM85_16415 PF00664 ABC transporter transmembrane region DGM85_16415 PF00005 ABC transporter DGM85_16415 PF03412 Peptidase C39 family DGM85_16435 PF02347 Glycine cleavage system P-protein DGM85_16440 PF00135 Carboxylesterase family DGM85_16445 PF00248 Aldo/keto reductase family DGM85_16450 PF00199 Catalase DGM85_16450 PF06628 Catalase-related immune-responsive DGM85_16450 PF18011 C-terminal domain found in long catalases DGM85_16480 PF02311 AraC-like ligand binding domain DGM85_16480 PF12833 Helix-turn-helix domain DGM85_16515 PF00326 Prolyl oligopeptidase family DGM85_16515 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region DGM85_16515 PF07676 WD40-like Beta Propeller Repeat DGM85_16550 PF03169 OPT oligopeptide transporter protein DGM85_16560 PF00326 Prolyl oligopeptidase family DGM85_16570 PF07733 Bacterial DNA polymerase III alpha NTPase domain DGM85_16570 PF02811 PHP domain DGM85_16570 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DGM85_16570 PF14579 Helix-hairpin-helix motif DGM85_16585 PF01726 LexA DNA binding domain DGM85_16585 PF00717 Peptidase S24-like DGM85_16620 PF00111 2Fe-2S iron-sulfur cluster binding domain DGM85_16620 PF01799 [2Fe-2S] binding domain DGM85_16625 PF03450 CO dehydrogenase flavoprotein C-terminal domain DGM85_16625 PF00941 FAD binding domain in molybdopterin dehydrogenase DGM85_16630 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DGM85_16630 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DGM85_16640 PF17755 UvrA DNA-binding domain DGM85_16660 PF07992 Pyridine nucleotide-disulphide oxidoreductase DGM85_16685 PF07971 Glycosyl hydrolase family 92 DGM85_16685 PF17678 Glycosyl hydrolase family 92 N-terminal domain DGM85_16700 PF00723 Glycosyl hydrolases family 15 DGM85_16780 PF00440 Bacterial regulatory proteins, tetR family DGM85_16795 PF11838 ERAP1-like C-terminal domain DGM85_16795 PF01433 Peptidase family M1 domain DGM85_16800 PF00709 Adenylosuccinate synthetase DGM85_16810 PF01145 SPFH domain / Band 7 family DGM85_16815 PF12221 Bacterial membrane protein N terminal DGM85_16815 PF01145 SPFH domain / Band 7 family DGM85_16820 PF00072 Response regulator receiver domain DGM85_16825 PF00226 DnaJ domain DGM85_16825 PF01556 DnaJ C terminal domain DGM85_16835 PF08534 Redoxin DGM85_16845 PF06832 Penicillin-Binding Protein C-terminus Family DGM85_16845 PF00912 Transglycosylase DGM85_16845 PF00905 Penicillin binding protein transpeptidase domain DGM85_16850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM85_16850 PF00512 His Kinase A (phospho-acceptor) domain DGM85_16850 PF00989 PAS fold DGM85_16875 PF11974 Bacterial alpha-2-macroglobulin MG3 domain DGM85_16875 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain DGM85_16875 PF17962 Bacterial macroglobulin domain 6 DGM85_16875 PF01835 MG2 domain DGM85_16875 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain DGM85_16875 PF00207 Alpha-2-macroglobulin family DGM85_16875 PF07703 Alpha-2-macroglobulin bait region domain DGM85_16875 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain DGM85_16895 PF00593 TonB dependent receptor DGM85_16895 PF07715 TonB-dependent Receptor Plug Domain DGM85_16900 PF04303 PrpF protein DGM85_16910 PF00872 Transposase, Mutator family DGM85_16915 PF00694 Aconitase C-terminal domain DGM85_16915 PF00330 Aconitase family (aconitate hydratase) DGM85_16920 PF00285 Citrate synthase, C-terminal domain DGM85_16930 PF02954 Bacterial regulatory protein, Fis family DGM85_16930 PF06506 Propionate catabolism activator DGM85_16930 PF00158 Sigma-54 interaction domain DGM85_16960 PF09115 DNA polymerase III, delta subunit, C terminal DGM85_16965 PF02618 YceG-like family DGM85_16970 PF04715 Anthranilate synthase component I, N terminal region DGM85_16970 PF00425 chorismate binding enzyme DGM85_16975 PF00109 Beta-ketoacyl synthase, N-terminal domain DGM85_16975 PF02801 Beta-ketoacyl synthase, C-terminal domain DGM85_16980 PF00550 Phosphopantetheine attachment site DGM85_16990 PF00698 Acyl transferase domain DGM85_17000 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DGM85_17000 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DGM85_17005 PF01783 Ribosomal L32p protein family DGM85_17010 PF02620 Large ribosomal RNA subunit accumulation protein YceD DGM85_17015 PF02545 Maf-like protein DGM85_17030 PF17863 AAA lid domain DGM85_17030 PF07726 ATPase family associated with various cellular activities (AAA) DGM85_17040 PF13559 Domain of unknown function (DUF4129) DGM85_17040 PF11992 Domain of unknown function (DUF3488) DGM85_17040 PF01841 Transglutaminase-like superfamily DGM85_17050 PF01230 HIT domain DGM85_17055 PF02132 RecR protein DGM85_17055 PF13662 Toprim domain DGM85_17060 PF02575 YbaB/EbfC DNA-binding family DGM85_17065 PF12169 DNA polymerase III subunits gamma and tau domain III DGM85_17065 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding DGM85_17065 PF12170 DNA polymerase III tau subunit V interacting with alpha DGM85_17080 PF02391 MoaE protein DGM85_17085 PF02597 ThiS family DGM85_17090 PF01967 MoaC family DGM85_17100 PF06463 Molybdenum Cofactor Synthesis C DGM85_17100 PF04055 Radical SAM superfamily DGM85_17105 PF00753 Metallo-beta-lactamase superfamily DGM85_17105 PF12706 Beta-lactamase superfamily domain DGM85_17115 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DGM85_17145 PF00929 Exonuclease DGM85_17150 PF00075 RNase H DGM85_17160 PF16123 Hydroxyacylglutathione hydrolase C-terminus DGM85_17160 PF00753 Metallo-beta-lactamase superfamily DGM85_17165 PF05257 CHAP domain DGM85_17165 PF01476 LysM domain DGM85_17190 PF00216 Bacterial DNA-binding protein DGM85_17195 PF05362 Lon protease (S16) C-terminal proteolytic domain DGM85_17195 PF02190 ATP-dependent protease La (LON) substrate-binding domain DGM85_17195 PF00004 ATPase family associated with various cellular activities (AAA) DGM85_17200 PF07724 AAA domain (Cdc48 subfamily) DGM85_17200 PF06689 ClpX C4-type zinc finger DGM85_17200 PF10431 C-terminal, D2-small domain, of ClpB protein DGM85_17205 PF00574 Clp protease DGM85_17210 PF05698 Bacterial trigger factor protein (TF) C-terminus DGM85_17210 PF05697 Bacterial trigger factor protein (TF) DGM85_17225 PF00872 Transposase, Mutator family DGM85_17265 PF00180 Isocitrate/isopropylmalate dehydrogenase DGM85_17265 PF18324 Hypothetical protein TT1725 DGM85_17275 PF00462 Glutaredoxin DGM85_17280 PF01435 Peptidase family M48 DGM85_17280 PF13181 Tetratricopeptide repeat DGM85_17285 PF00072 Response regulator receiver domain DGM85_17285 PF00486 Transcriptional regulatory protein, C terminal DGM85_17290 PF11808 Phosphate regulon sensor protein PhoR DGM85_17290 PF00989 PAS fold DGM85_17290 PF00512 His Kinase A (phospho-acceptor) domain DGM85_17290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM85_17295 PF13089 Polyphosphate kinase N-terminal domain DGM85_17295 PF17941 Polyphosphate kinase C-terminal domain 1 DGM85_17295 PF02503 Polyphosphate kinase middle domain DGM85_17295 PF13090 Polyphosphate kinase C-terminal domain 2 DGM85_17300 PF02541 Ppx/GppA phosphatase family DGM85_17305 PF13439 Glycosyltransferase Family 4 DGM85_17305 PF00534 Glycosyl transferases group 1 DGM85_17310 PF01569 PAP2 superfamily DGM85_17315 PF00149 Calcineurin-like phosphoesterase DGM85_17335 PF04305 Protein of unknown function (DUF455) DGM85_17340 PF00156 Phosphoribosyl transferase domain DGM85_17355 PF02875 Mur ligase family, glutamate ligase domain DGM85_17355 PF08245 Mur ligase middle domain DGM85_17365 PF00300 Histidine phosphatase superfamily (branch 1) DGM85_17370 PF10459 Peptidase S46 DGM85_17375 PF05506 Domain of unknown function (DUF756) DGM85_17375 PF04185 Phosphoesterase family DGM85_17385 PF08240 Alcohol dehydrogenase GroES-like domain DGM85_17385 PF00107 Zinc-binding dehydrogenase DGM85_17395 PF17850 CysA C-terminal regulatory domain DGM85_17395 PF12857 TOBE-like domain DGM85_17395 PF00005 ABC transporter DGM85_17400 PF00528 Binding-protein-dependent transport system inner membrane component DGM85_17405 PF00528 Binding-protein-dependent transport system inner membrane component DGM85_17415 PF00155 Aminotransferase class I and II DGM85_17425 PF00849 RNA pseudouridylate synthase DGM85_17435 PF00223 Photosystem I psaA/psaB protein DGM85_17435 PF00691 OmpA family DGM85_17445 PF00872 Transposase, Mutator family DGM85_17460 PF08240 Alcohol dehydrogenase GroES-like domain DGM85_17460 PF00107 Zinc-binding dehydrogenase DGM85_17465 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DGM85_17465 PF07992 Pyridine nucleotide-disulphide oxidoreductase DGM85_17485 PF00043 Glutathione S-transferase, C-terminal domain DGM85_17485 PF02798 Glutathione S-transferase, N-terminal domain DGM85_17490 PF00056 lactate/malate dehydrogenase, NAD binding domain DGM85_17490 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DGM85_17495 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DGM85_17500 PF00679 Elongation factor G C-terminus DGM85_17500 PF00009 Elongation factor Tu GTP binding domain DGM85_17500 PF03144 Elongation factor Tu domain 2 DGM85_17510 PF01425 Amidase DGM85_17520 PF01474 Class-II DAHP synthetase family DGM85_17540 PF02600 Disulfide bond formation protein DsbB DGM85_17545 PF01196 Ribosomal protein L17 DGM85_17550 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DGM85_17550 PF01000 RNA polymerase Rpb3/RpoA insert domain DGM85_17550 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DGM85_17555 PF01479 S4 domain DGM85_17555 PF00163 Ribosomal protein S4/S9 N-terminal domain DGM85_17560 PF00411 Ribosomal protein S11 DGM85_17565 PF00416 Ribosomal protein S13/S18 DGM85_17570 PF00344 SecY translocase DGM85_17575 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DGM85_17580 PF00327 Ribosomal protein L30p/L7e DGM85_17585 PF03719 Ribosomal protein S5, C-terminal domain DGM85_17585 PF00333 Ribosomal protein S5, N-terminal domain DGM85_17590 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DGM85_17595 PF00347 Ribosomal protein L6 DGM85_17600 PF00410 Ribosomal protein S8 DGM85_17605 PF00253 Ribosomal protein S14p/S29e DGM85_17610 PF00673 ribosomal L5P family C-terminus DGM85_17610 PF00281 Ribosomal protein L5 DGM85_17615 PF00467 KOW motif DGM85_17615 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DGM85_17620 PF00238 Ribosomal protein L14p/L23e DGM85_17625 PF00366 Ribosomal protein S17 DGM85_17630 PF00831 Ribosomal L29 protein DGM85_17635 PF00252 Ribosomal protein L16p/L10e DGM85_17640 PF07650 KH domain DGM85_17640 PF00189 Ribosomal protein S3, C-terminal domain DGM85_17645 PF00237 Ribosomal protein L22p/L17e DGM85_17650 PF00203 Ribosomal protein S19 DGM85_17655 PF03947 Ribosomal Proteins L2, C-terminal domain DGM85_17655 PF00181 Ribosomal Proteins L2, RNA binding domain DGM85_17660 PF00276 Ribosomal protein L23 DGM85_17665 PF00573 Ribosomal protein L4/L1 family DGM85_17670 PF00297 Ribosomal protein L3 DGM85_17675 PF00338 Ribosomal protein S10p/S20e DGM85_17680 PF00872 Transposase, Mutator family DGM85_17695 PF00009 Elongation factor Tu GTP binding domain DGM85_17695 PF03144 Elongation factor Tu domain 2 DGM85_17695 PF03143 Elongation factor Tu C-terminal domain DGM85_17700 PF00009 Elongation factor Tu GTP binding domain DGM85_17700 PF03764 Elongation factor G, domain IV DGM85_17700 PF03144 Elongation factor Tu domain 2 DGM85_17700 PF00679 Elongation factor G C-terminus DGM85_17700 PF14492 Elongation Factor G, domain II DGM85_17705 PF00177 Ribosomal protein S7p/S5e DGM85_17710 PF00164 Ribosomal protein S12/S23 DGM85_17715 PF04998 RNA polymerase Rpb1, domain 5 DGM85_17715 PF04983 RNA polymerase Rpb1, domain 3 DGM85_17715 PF00623 RNA polymerase Rpb1, domain 2 DGM85_17715 PF05000 RNA polymerase Rpb1, domain 4 DGM85_17715 PF04997 RNA polymerase Rpb1, domain 1 DGM85_17720 PF04563 RNA polymerase beta subunit DGM85_17720 PF04561 RNA polymerase Rpb2, domain 2 DGM85_17720 PF04565 RNA polymerase Rpb2, domain 3 DGM85_17720 PF10385 RNA polymerase beta subunit external 1 domain DGM85_17720 PF00562 RNA polymerase Rpb2, domain 6 DGM85_17720 PF04560 RNA polymerase Rpb2, domain 7 DGM85_17725 PF00542 Ribosomal protein L7/L12 C-terminal domain DGM85_17725 PF16320 Ribosomal protein L7/L12 dimerisation domain DGM85_17730 PF00466 Ribosomal protein L10 DGM85_17735 PF00687 Ribosomal protein L1p/L10e family DGM85_17740 PF03946 Ribosomal protein L11, N-terminal domain DGM85_17740 PF00298 Ribosomal protein L11, RNA binding domain DGM85_17745 PF02357 Transcription termination factor nusG DGM85_17745 PF00467 KOW motif DGM85_17750 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DGM85_17760 PF03144 Elongation factor Tu domain 2 DGM85_17760 PF03143 Elongation factor Tu C-terminal domain DGM85_17760 PF00009 Elongation factor Tu GTP binding domain DGM85_17780 PF01926 50S ribosome-binding GTPase DGM85_17780 PF06071 Protein of unknown function (DUF933) DGM85_17785 PF01195 Peptidyl-tRNA hydrolase DGM85_17790 PF01386 Ribosomal L25p family DGM85_17790 PF14693 Ribosomal protein TL5, C-terminal domain DGM85_17795 PF14572 Phosphoribosyl synthetase-associated domain DGM85_17795 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DGM85_17805 PF08544 GHMP kinases C terminal DGM85_17805 PF00288 GHMP kinases N terminal domain DGM85_17810 PF03550 Outer membrane lipoprotein LolB DGM85_17820 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DGM85_17820 PF01488 Shikimate / quinate 5-dehydrogenase DGM85_17820 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DGM85_17825 PF03462 PCRF domain DGM85_17825 PF00472 RF-1 domain DGM85_17835 PF00994 Probable molybdopterin binding domain DGM85_17840 PF03976 Polyphosphate kinase 2 (PPK2) DGM85_17850 PF00708 Acylphosphatase DGM85_17855 PF08534 Redoxin DGM85_17860 PF03631 Virulence factor BrkB DGM85_17865 PF03358 NADPH-dependent FMN reductase DGM85_17875 PF17189 Glycosyl hydrolase family 30 beta sandwich domain DGM85_17875 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain DGM85_17885 PF04073 Aminoacyl-tRNA editing domain DGM85_17890 PF00082 Subtilase family DGM85_17890 PF04151 Bacterial pre-peptidase C-terminal domain DGM85_17895 PF00082 Subtilase family DGM85_17895 PF04151 Bacterial pre-peptidase C-terminal domain DGM85_17900 PF00082 Subtilase family DGM85_17900 PF04151 Bacterial pre-peptidase C-terminal domain DGM85_17905 PF01063 Amino-transferase class IV DGM85_17920 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DGM85_17920 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DGM85_17920 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch DGM85_17965 PF01367 5'-3' exonuclease, C-terminal SAM fold DGM85_17965 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DGM85_17965 PF00476 DNA polymerase family A DGM85_17965 PF01612 3'-5' exonuclease DGM85_17970 PF00293 NUDIX domain DGM85_17980 PF00561 alpha/beta hydrolase fold DGM85_17985 PF17827 PrmC N-terminal domain DGM85_17985 PF05175 Methyltransferase small domain DGM85_17990 PF00578 AhpC/TSA family DGM85_17990 PF10417 C-terminal domain of 1-Cys peroxiredoxin DGM85_17995 PF07992 Pyridine nucleotide-disulphide oxidoreductase DGM85_17995 PF13192 Thioredoxin domain DGM85_18000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM85_18000 PF03466 LysR substrate binding domain DGM85_18010 PF14760 Rnk N-terminus DGM85_18010 PF01272 Transcription elongation factor, GreA/GreB, C-term DGM85_18015 PF00923 Transaldolase/Fructose-6-phosphate aldolase DGM85_18030 PF01625 Peptide methionine sulfoxide reductase DGM85_18040 PF00196 Bacterial regulatory proteins, luxR family DGM85_18040 PF00072 Response regulator receiver domain DGM85_18045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM85_18045 PF00512 His Kinase A (phospho-acceptor) domain DGM85_18045 PF00989 PAS fold DGM85_18045 PF13188 PAS domain DGM85_18045 PF13426 PAS domain DGM85_18050 PF00072 Response regulator receiver domain DGM85_18050 PF00990 Diguanylate cyclase, GGDEF domain DGM85_18065 PF00749 tRNA synthetases class I (E and Q), catalytic domain DGM85_18065 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain DGM85_18075 PF00892 EamA-like transporter family DGM85_18095 PF18125 RlmM ferredoxin-like domain DGM85_18095 PF01728 FtsJ-like methyltransferase DGM85_18100 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DGM85_18100 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DGM85_18105 PF08450 SMP-30/Gluconolactonase/LRE-like region DGM85_18125 PF00378 Enoyl-CoA hydratase/isomerase DGM85_18135 PF00501 AMP-binding enzyme DGM85_18135 PF13193 AMP-binding enzyme C-terminal domain DGM85_18140 PF03466 LysR substrate binding domain DGM85_18140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM85_18145 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit DGM85_18145 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DGM85_18150 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DGM85_18155 PF07729 FCD domain DGM85_18155 PF00392 Bacterial regulatory proteins, gntR family DGM85_18175 PF01494 FAD binding domain DGM85_18180 PF01494 FAD binding domain DGM85_18195 PF01923 Cobalamin adenosyltransferase DGM85_18200 PF00850 Histone deacetylase domain DGM85_18215 PF03968 OstA-like protein DGM85_18215 PF04453 LPS transport system D DGM85_18220 PF00639 PPIC-type PPIASE domain DGM85_18220 PF09312 SurA N-terminal domain DGM85_18225 PF04166 Pyridoxal phosphate biosynthetic protein PdxA DGM85_18230 PF00398 Ribosomal RNA adenine dimethylase DGM85_18235 PF04379 ApaG domain DGM85_18240 PF00149 Calcineurin-like phosphoesterase DGM85_18245 PF00186 Dihydrofolate reductase DGM85_18255 PF00303 Thymidylate synthase DGM85_18260 PF01790 Prolipoprotein diacylglyceryl transferase DGM85_18270 PF04536 TPM domain DGM85_18280 PF01219 Prokaryotic diacylglycerol kinase DGM85_18290 PF08521 Two-component sensor kinase N-terminal DGM85_18290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM85_18290 PF00512 His Kinase A (phospho-acceptor) domain DGM85_18295 PF00072 Response regulator receiver domain DGM85_18295 PF00486 Transcriptional regulatory protein, C terminal DGM85_18300 PF13472 GDSL-like Lipase/Acylhydrolase family DGM85_18305 PF00005 ABC transporter DGM85_18315 PF02668 Taurine catabolism dioxygenase TauD, TfdA family DGM85_18325 PF00005 ABC transporter DGM85_18330 PF00528 Binding-protein-dependent transport system inner membrane component DGM85_18350 PF07715 TonB-dependent Receptor Plug Domain DGM85_18350 PF00593 TonB dependent receptor DGM85_18360 PF00248 Aldo/keto reductase family DGM85_18365 PF01773 Na+ dependent nucleoside transporter N-terminus DGM85_18365 PF07662 Na+ dependent nucleoside transporter C-terminus DGM85_18365 PF07670 Nucleoside recognition DGM85_18370 PF00294 pfkB family carbohydrate kinase DGM85_18385 PF01207 Dihydrouridine synthase (Dus) DGM85_18390 PF13649 Methyltransferase domain DGM85_18400 PF02773 S-adenosylmethionine synthetase, C-terminal domain DGM85_18400 PF02772 S-adenosylmethionine synthetase, central domain DGM85_18400 PF00438 S-adenosylmethionine synthetase, N-terminal domain DGM85_18405 PF00328 Histidine phosphatase superfamily (branch 2) DGM85_18420 PF00691 OmpA family DGM85_18420 PF01389 OmpA-like transmembrane domain DGM85_18440 PF00311 Phosphoenolpyruvate carboxylase DGM85_18450 PF05221 S-adenosyl-L-homocysteine hydrolase DGM85_18450 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DGM85_18455 PF05175 Methyltransferase small domain DGM85_18465 PF00685 Sulfotransferase domain DGM85_18485 PF00128 Alpha amylase, catalytic domain DGM85_18490 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DGM85_18500 PF00082 Subtilase family DGM85_18500 PF09286 Pro-kumamolisin, activation domain DGM85_18505 PF00109 Beta-ketoacyl synthase, N-terminal domain DGM85_18505 PF16197 Ketoacyl-synthetase C-terminal extension DGM85_18505 PF00107 Zinc-binding dehydrogenase DGM85_18505 PF00698 Acyl transferase domain DGM85_18505 PF00550 Phosphopantetheine attachment site DGM85_18505 PF02801 Beta-ketoacyl synthase, C-terminal domain DGM85_18505 PF14765 Polyketide synthase dehydratase DGM85_18505 PF08240 Alcohol dehydrogenase GroES-like domain DGM85_18505 PF08659 KR domain DGM85_18515 PF02219 Methylenetetrahydrofolate reductase DGM85_18525 PF00293 NUDIX domain DGM85_18530 PF02810 SEC-C motif DGM85_18530 PF07517 SecA DEAD-like domain DGM85_18530 PF07516 SecA Wing and Scaffold domain DGM85_18530 PF01043 SecA preprotein cross-linking domain DGM85_18535 PF01551 Peptidase family M23 DGM85_18535 PF08525 Opacity-associated protein A N-terminal motif DGM85_18535 PF01476 LysM domain DGM85_18545 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase DGM85_18550 PF12327 FtsZ family, C-terminal domain DGM85_18550 PF00091 Tubulin/FtsZ family, GTPase domain DGM85_18555 PF02491 SHS2 domain inserted in FTSA DGM85_18560 PF03799 Cell division protein FtsQ DGM85_18560 PF08478 POTRA domain, FtsQ-type DGM85_18565 PF01820 D-ala D-ala ligase N-terminus DGM85_18565 PF07478 D-ala D-ala ligase C-terminus DGM85_18570 PF08245 Mur ligase middle domain DGM85_18570 PF02875 Mur ligase family, glutamate ligase domain DGM85_18570 PF01225 Mur ligase family, catalytic domain DGM85_18575 PF03033 Glycosyltransferase family 28 N-terminal domain DGM85_18575 PF04101 Glycosyltransferase family 28 C-terminal domain DGM85_18580 PF01098 Cell cycle protein DGM85_18585 PF00953 Glycosyl transferase family 4 DGM85_18590 PF01225 Mur ligase family, catalytic domain DGM85_18590 PF02875 Mur ligase family, glutamate ligase domain DGM85_18590 PF08245 Mur ligase middle domain DGM85_18595 PF01225 Mur ligase family, catalytic domain DGM85_18595 PF02875 Mur ligase family, glutamate ligase domain DGM85_18595 PF08245 Mur ligase middle domain DGM85_18600 PF03717 Penicillin-binding Protein dimerisation domain DGM85_18600 PF00905 Penicillin binding protein transpeptidase domain DGM85_18605 PF04999 Cell division protein FtsL DGM85_18610 PF01795 MraW methylase family DGM85_18615 PF02381 MraZ protein, putative antitoxin-like DGM85_18640 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DGM85_18645 PF04348 LppC putative lipoprotein DGM85_18650 PF02021 Uncharacterised protein family UPF0102 DGM85_18655 PF04307 LexA-binding, inner membrane-associated putative hydrolase DGM85_18660 PF02913 FAD linked oxidases, C-terminal domain DGM85_18660 PF01565 FAD binding domain DGM85_18670 PF00072 Response regulator receiver domain DGM85_18670 PF00486 Transcriptional regulatory protein, C terminal DGM85_18675 PF02702 Osmosensitive K+ channel His kinase sensor domain DGM85_18675 PF00512 His Kinase A (phospho-acceptor) domain DGM85_18675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM85_18675 PF13492 GAF domain DGM85_18675 PF13493 Domain of unknown function (DUF4118) DGM85_18680 PF02669 K+-transporting ATPase, c chain DGM85_18690 PF03814 Potassium-transporting ATPase A subunit DGM85_18710 PF02769 AIR synthase related protein, C-terminal domain DGM85_18710 PF00586 AIR synthase related protein, N-terminal domain DGM85_18715 PF01029 NusB family DGM85_18720 PF00885 6,7-dimethyl-8-ribityllumazine synthase DGM85_18725 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DGM85_18725 PF00925 GTP cyclohydrolase II DGM85_18730 PF00677 Lumazine binding domain DGM85_18740 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DGM85_18740 PF01872 RibD C-terminal domain DGM85_18750 PF03477 ATP cone domain DGM85_18755 PF00464 Serine hydroxymethyltransferase DGM85_18765 PF00005 ABC transporter DGM85_18765 PF12848 ABC transporter DGM85_18770 PF01327 Polypeptide deformylase DGM85_18775 PF03960 ArsC family DGM85_18795 PF01270 Glycosyl hydrolases family 8 DGM85_18800 PF03170 Bacterial cellulose synthase subunit DGM85_18805 PF07238 PilZ domain DGM85_18805 PF00535 Glycosyl transferase family 2 DGM85_18805 PF03552 Cellulose synthase DGM85_18875 PF07715 TonB-dependent Receptor Plug Domain DGM85_18875 PF00593 TonB dependent receptor DGM85_18885 PF00392 Bacterial regulatory proteins, gntR family DGM85_18885 PF07702 UTRA domain DGM85_18895 PF00263 Bacterial type II and III secretion system protein DGM85_18895 PF03958 Bacterial type II/III secretion system short domain DGM85_18905 PF10741 Type II secretion system (T2SS), protein M subtype b DGM85_18910 PF05137 Fimbrial assembly protein (PilN) DGM85_18915 PF03934 Type II secretion system (T2SS), protein K DGM85_18925 PF07963 Prokaryotic N-terminal methylation motif DGM85_18930 PF12019 Type II transport protein GspH DGM85_18935 PF08334 Type II secretion system (T2SS), protein G DGM85_18940 PF00482 Type II secretion system (T2SS), protein F DGM85_18950 PF00437 Type II/IV secretion system protein DGM85_18950 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DGM85_18955 PF04151 Bacterial pre-peptidase C-terminal domain DGM85_18955 PF00082 Subtilase family DGM85_18965 PF00082 Subtilase family DGM85_18965 PF04151 Bacterial pre-peptidase C-terminal domain DGM85_18970 PF05658 Head domain of trimeric autotransporter adhesin DGM85_18970 PF03895 YadA-like membrane anchor domain DGM85_18970 PF13018 Extended Signal Peptide of Type V secretion system DGM85_18970 PF05662 Coiled stalk of trimeric autotransporter adhesin DGM85_18975 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal DGM85_18975 PF02769 AIR synthase related protein, C-terminal domain DGM85_18975 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DGM85_18985 PF10411 Disulfide bond isomerase protein N-terminus DGM85_18985 PF13098 Thioredoxin-like domain DGM85_19000 PF02899 Phage integrase, N-terminal SAM-like domain DGM85_19000 PF00589 Phage integrase family DGM85_19015 PF03739 Lipopolysaccharide export system permease LptF/LptG DGM85_19025 PF00883 Cytosol aminopeptidase family, catalytic domain DGM85_19025 PF02789 Cytosol aminopeptidase family, N-terminal domain DGM85_19040 PF08264 Anticodon-binding domain of tRNA DGM85_19040 PF00133 tRNA synthetases class I (I, L, M and V) DGM85_19040 PF10458 Valyl tRNA synthetase tRNA binding arm DGM85_19050 PF07715 TonB-dependent Receptor Plug Domain DGM85_19050 PF00593 TonB dependent receptor DGM85_19055 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain DGM85_19055 PF01464 Transglycosylase SLT domain DGM85_19060 PF05598 Transposase domain (DUF772) DGM85_19060 PF01609 Transposase DDE domain DGM85_19065 PF12627 Probable RNA and SrmB- binding site of polymerase A DGM85_19065 PF01743 Poly A polymerase head domain DGM85_19065 PF01966 HD domain DGM85_19075 PF01979 Amidohydrolase family DGM85_19080 PF01380 SIS domain DGM85_19085 PF00356 Bacterial regulatory proteins, lacI family DGM85_19090 PF07690 Major Facilitator Superfamily DGM85_19095 PF00392 Bacterial regulatory proteins, gntR family DGM85_19095 PF07702 UTRA domain DGM85_19115 PF03934 Type II secretion system (T2SS), protein K DGM85_19120 PF11612 Type II secretion system (T2SS), protein J DGM85_19120 PF07963 Prokaryotic N-terminal methylation motif DGM85_19125 PF07963 Prokaryotic N-terminal methylation motif DGM85_19125 PF02501 Type II secretion system (T2SS), protein I DGM85_19130 PF07963 Prokaryotic N-terminal methylation motif DGM85_19130 PF12019 Type II transport protein GspH DGM85_19135 PF07963 Prokaryotic N-terminal methylation motif DGM85_19135 PF08334 Type II secretion system (T2SS), protein G DGM85_19140 PF00482 Type II secretion system (T2SS), protein F DGM85_19145 PF00437 Type II/IV secretion system protein DGM85_19150 PF00263 Bacterial type II and III secretion system protein DGM85_19150 PF03958 Bacterial type II/III secretion system short domain DGM85_19195 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DGM85_19200 PF00512 His Kinase A (phospho-acceptor) domain DGM85_19200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM85_19205 PF00072 Response regulator receiver domain DGM85_19210 PF01590 GAF domain DGM85_19210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM85_19210 PF00512 His Kinase A (phospho-acceptor) domain DGM85_19210 PF08446 PAS fold DGM85_19210 PF00360 Phytochrome region DGM85_19215 PF04972 BON domain DGM85_19220 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DGM85_19220 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DGM85_19225 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DGM85_19225 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DGM85_19260 PF01467 Cytidylyltransferase-like DGM85_19260 PF00293 NUDIX domain DGM85_19270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM85_19270 PF03466 LysR substrate binding domain DGM85_19280 PF03572 Peptidase family S41 DGM85_19280 PF17804 Tail specific protease N-terminal domain DGM85_19280 PF11818 C-terminal domain of tail specific protease (DUF3340) DGM85_19280 PF00595 PDZ domain DGM85_19285 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family DGM85_19285 PF04055 Radical SAM superfamily DGM85_19290 PF03099 Biotin/lipoate A/B protein ligase family DGM85_19295 PF04359 Protein of unknown function (DUF493) DGM85_19305 PF07943 Penicillin-binding protein 5, C-terminal domain DGM85_19305 PF00768 D-alanyl-D-alanine carboxypeptidase DGM85_19310 PF03330 Lytic transglycolase DGM85_19310 PF05036 Sporulation related domain DGM85_19315 PF13406 Transglycosylase SLT domain DGM85_19320 PF00295 Glycosyl hydrolases family 28 DGM85_19350 PF02534 Type IV secretory system Conjugative DNA transfer DGM85_19355 PF01098 Cell cycle protein DGM85_19360 PF03717 Penicillin-binding Protein dimerisation domain DGM85_19360 PF00905 Penicillin binding protein transpeptidase domain DGM85_19370 PF04085 rod shape-determining protein MreC DGM85_19380 PF00294 pfkB family carbohydrate kinase DGM85_19395 PF00158 Sigma-54 interaction domain DGM85_19395 PF02954 Bacterial regulatory protein, Fis family DGM85_19395 PF01590 GAF domain DGM85_19405 PF08240 Alcohol dehydrogenase GroES-like domain DGM85_19405 PF00107 Zinc-binding dehydrogenase DGM85_19420 PF00497 Bacterial extracellular solute-binding proteins, family 3 DGM85_19425 PF13360 PQQ-like domain DGM85_19445 PF01433 Peptidase family M1 domain DGM85_19445 PF11838 ERAP1-like C-terminal domain DGM85_19450 PF03707 Bacterial signalling protein N terminal repeat DGM85_19450 PF00990 Diguanylate cyclase, GGDEF domain DGM85_19450 PF00563 EAL domain DGM85_19455 PF01209 ubiE/COQ5 methyltransferase family DGM85_19465 PF13533 Biotin-lipoyl like DGM85_19470 PF13673 Acetyltransferase (GNAT) domain DGM85_19485 PF10431 C-terminal, D2-small domain, of ClpB protein DGM85_19485 PF07724 AAA domain (Cdc48 subfamily) DGM85_19485 PF00004 ATPase family associated with various cellular activities (AAA) DGM85_19490 PF00227 Proteasome subunit DGM85_19495 PF02899 Phage integrase, N-terminal SAM-like domain DGM85_19495 PF00589 Phage integrase family DGM85_19505 PF01678 Diaminopimelate epimerase DGM85_19515 PF04304 Protein of unknown function (DUF454) DGM85_19520 PF00326 Prolyl oligopeptidase family DGM85_19520 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain DGM85_19525 PF00155 Aminotransferase class I and II DGM85_19535 PF00326 Prolyl oligopeptidase family DGM85_19535 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain DGM85_19575 PF03900 Porphobilinogen deaminase, C-terminal domain DGM85_19575 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DGM85_19580 PF04397 LytTr DNA-binding domain DGM85_19580 PF00072 Response regulator receiver domain DGM85_19585 PF06580 Histidine kinase DGM85_19585 PF07694 5TMR of 5TMR-LYT DGM85_19595 PF13632 Glycosyl transferase family group 2 DGM85_19635 PF03797 Autotransporter beta-domain DGM85_19645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM85_19645 PF00512 His Kinase A (phospho-acceptor) domain DGM85_19645 PF09456 RcsC Alpha-Beta-Loop (ABL) DGM85_19645 PF00072 Response regulator receiver domain DGM85_19660 PF00990 Diguanylate cyclase, GGDEF domain DGM85_19660 PF05231 MASE1 DGM85_19660 PF08447 PAS fold DGM85_19660 PF08448 PAS fold DGM85_19660 PF13426 PAS domain DGM85_19660 PF00563 EAL domain DGM85_19680 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DGM85_19680 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DGM85_19690 PF01204 Trehalase DGM85_19705 PF01544 CorA-like Mg2+ transporter protein DGM85_19715 PF00324 Amino acid permease DGM85_19725 PF00553 Cellulose binding domain DGM85_19725 PF00041 Fibronectin type III domain DGM85_19725 PF01341 Glycosyl hydrolases family 6 DGM85_19730 PF03330 Lytic transglycolase DGM85_19735 PF00892 EamA-like transporter family DGM85_19755 PF07992 Pyridine nucleotide-disulphide oxidoreductase DGM85_19760 PF02082 Transcriptional regulator DGM85_19765 PF00990 Diguanylate cyclase, GGDEF domain DGM85_19775 PF07759 Protein of unknown function (DUF1615) DGM85_19825 PF00872 Transposase, Mutator family DGM85_19845 PF05598 Transposase domain (DUF772) DGM85_19845 PF01609 Transposase DDE domain DGM85_19850 PF17831 Pyruvate dehydrogenase E1 component middle domain DGM85_19850 PF00456 Transketolase, thiamine diphosphate binding domain DGM85_19855 PF07745 Glycosyl hydrolase family 53 DGM85_19895 PF07729 FCD domain DGM85_19895 PF00392 Bacterial regulatory proteins, gntR family DGM85_19905 PF00698 Acyl transferase domain DGM85_19910 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase DGM85_19915 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG DGM85_19925 PF01039 Carboxyl transferase domain DGM85_19930 PF06857 Malonate decarboxylase delta subunit (MdcD) DGM85_19935 PF16957 Malonate decarboxylase, alpha subunit, transporter DGM85_19965 PF04264 YceI-like domain DGM85_19970 PF00881 Nitroreductase family DGM85_19990 PF01609 Transposase DDE domain DGM85_19990 PF05598 Transposase domain (DUF772) DGM85_20010 PF02592 Putative vitamin uptake transporter DGM85_20015 PF08335 GlnD PII-uridylyltransferase DGM85_20015 PF03710 Glutamate-ammonia ligase adenylyltransferase DGM85_20025 PF08450 SMP-30/Gluconolactonase/LRE-like region DGM85_20060 PF00793 DAHP synthetase I family DGM85_20065 PF07804 HipA-like C-terminal domain DGM85_20070 PF00593 TonB dependent receptor DGM85_20070 PF07715 TonB-dependent Receptor Plug Domain DGM85_20080 PF00118 TCP-1/cpn60 chaperonin family DGM85_20085 PF00166 Chaperonin 10 Kd subunit DGM85_20100 PF03091 CutA1 divalent ion tolerance protein DGM85_20105 PF02683 Cytochrome C biogenesis protein transmembrane region DGM85_20105 PF11412 Disulphide bond corrector protein DsbC DGM85_20110 PF01220 Dehydroquinase class II DGM85_20115 PF00364 Biotin-requiring enzyme DGM85_20125 PF02785 Biotin carboxylase C-terminal domain DGM85_20125 PF00289 Biotin carboxylase, N-terminal domain DGM85_20125 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DGM85_20155 PF01381 Helix-turn-helix DGM85_20170 PF02954 Bacterial regulatory protein, Fis family DGM85_20200 PF00782 Dual specificity phosphatase, catalytic domain DGM85_20205 PF12147 Putative methyltransferase DGM85_20205 PF12146 Serine aminopeptidase, S33 DGM85_20210 PF01066 CDP-alcohol phosphatidyltransferase DGM85_20215 PF01808 AICARFT/IMPCHase bienzyme DGM85_20215 PF02142 MGS-like domain DGM85_20225 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DGM85_20225 PF02843 Phosphoribosylglycinamide synthetase, C domain DGM85_20225 PF02844 Phosphoribosylglycinamide synthetase, N domain DGM85_20235 PF12805 FUSC-like inner membrane protein yccS DGM85_20240 PF07690 Major Facilitator Superfamily DGM85_20245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM85_20245 PF03466 LysR substrate binding domain DGM85_20250 PF07690 Major Facilitator Superfamily DGM85_20265 PF03186 CobD/Cbib protein DGM85_20265 PF17113 Regulatory signalling modulator protein AmpE DGM85_20270 PF09297 NADH pyrophosphatase zinc ribbon domain DGM85_20270 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain DGM85_20270 PF00293 NUDIX domain DGM85_20280 PF01521 Iron-sulphur cluster biosynthesis DGM85_20300 PF00072 Response regulator receiver domain DGM85_20300 PF00486 Transcriptional regulatory protein, C terminal DGM85_20305 PF00672 HAMP domain DGM85_20305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM85_20305 PF00512 His Kinase A (phospho-acceptor) domain DGM85_20305 PF01627 Hpt domain DGM85_20305 PF00072 Response regulator receiver domain DGM85_20305 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DGM85_20310 PF00210 Ferritin-like domain DGM85_20320 PF00293 NUDIX domain DGM85_20335 PF00380 Ribosomal protein S9/S16 DGM85_20340 PF00572 Ribosomal protein L13 DGM85_20345 PF03232 Ubiquinone biosynthesis protein COQ7 DGM85_20350 PF00893 Small Multidrug Resistance protein DGM85_20355 PF02675 S-adenosylmethionine decarboxylase DGM85_20360 PF00027 Cyclic nucleotide-binding domain DGM85_20360 PF00325 Bacterial regulatory proteins, crp family DGM85_20370 PF00218 Indole-3-glycerol phosphate synthase DGM85_20375 PF00591 Glycosyl transferase family, a/b domain DGM85_20375 PF02885 Glycosyl transferase family, helical bundle domain DGM85_20385 PF00117 Glutamine amidotransferase class-I DGM85_20395 PF00425 chorismate binding enzyme DGM85_20395 PF04715 Anthranilate synthase component I, N terminal region DGM85_20400 PF00781 Diacylglycerol kinase catalytic domain DGM85_20410 PF00834 Ribulose-phosphate 3 epimerase family DGM85_20420 PF05099 Tellurite resistance protein TerB DGM85_20420 PF00226 DnaJ domain DGM85_20425 PF01259 SAICAR synthetase DGM85_20445 PF00182 Chitinase class I DGM85_20450 PF01447 Thermolysin metallopeptidase, catalytic domain DGM85_20450 PF02868 Thermolysin metallopeptidase, alpha-helical domain DGM85_20450 PF01483 Proprotein convertase P-domain DGM85_20450 PF07504 Fungalysin/Thermolysin Propeptide Motif DGM85_20465 PF13244 Domain of unknown function (DUF4040) DGM85_20465 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter DGM85_20465 PF00361 Proton-conducting membrane transporter DGM85_20465 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DGM85_20470 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DGM85_20475 PF00361 Proton-conducting membrane transporter DGM85_20485 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) DGM85_20490 PF03334 Na+/H+ antiporter subunit DGM85_20510 PF04209 homogentisate 1,2-dioxygenase DGM85_20515 PF04480 Protein of unknown function (DUF559) DGM85_20520 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DGM85_20525 PF01047 MarR family DGM85_20535 PF00854 POT family DGM85_20545 PF03301 Tryptophan 2,3-dioxygenase DGM85_20560 PF00676 Dehydrogenase E1 component DGM85_20565 PF02779 Transketolase, pyrimidine binding domain DGM85_20565 PF02780 Transketolase, C-terminal domain DGM85_20575 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DGM85_20575 PF00364 Biotin-requiring enzyme DGM85_20580 PF00271 Helicase conserved C-terminal domain DGM85_20580 PF00270 DEAD/DEAH box helicase DGM85_20600 PF00873 AcrB/AcrD/AcrF family DGM85_20615 PF02321 Outer membrane efflux protein DGM85_20620 PF06903 VirK protein DGM85_20645 PF05598 Transposase domain (DUF772) DGM85_20645 PF01609 Transposase DDE domain DGM85_20665 PF13460 NAD(P)H-binding DGM85_20670 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DGM85_20670 PF00128 Alpha amylase, catalytic domain DGM85_20680 PF00128 Alpha amylase, catalytic domain DGM85_20685 PF02446 4-alpha-glucanotransferase DGM85_20690 PF00128 Alpha amylase, catalytic domain DGM85_20690 PF11941 Domain of unknown function (DUF3459) DGM85_20690 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DGM85_20695 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DGM85_20695 PF02806 Alpha amylase, C-terminal all-beta domain DGM85_20695 PF00128 Alpha amylase, catalytic domain DGM85_20700 PF00534 Glycosyl transferases group 1 DGM85_20700 PF08323 Starch synthase catalytic domain DGM85_20705 PF00990 Diguanylate cyclase, GGDEF domain DGM85_20710 PF05661 Protein of unknown function (DUF808) DGM85_20715 PF03109 ABC1 family DGM85_20720 PF00884 Sulfatase DGM85_20725 PF00924 Mechanosensitive ion channel DGM85_20725 PF12794 Mechanosensitive ion channel inner membrane domain 1 DGM85_20725 PF12795 Mechanosensitive ion channel porin domain DGM85_20745 PF01464 Transglycosylase SLT domain DGM85_20755 PF00263 Bacterial type II and III secretion system protein DGM85_20755 PF03958 Bacterial type II/III secretion system short domain DGM85_20760 PF01311 Bacterial export proteins, family 1 DGM85_20770 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DGM85_20770 PF02874 ATP synthase alpha/beta family, beta-barrel domain DGM85_20770 PF18269 T3SS EscN ATPase C-terminal domain DGM85_20785 PF01514 Secretory protein of YscJ/FliF family DGM85_20800 PF01312 FlhB HrpN YscU SpaS Family DGM85_20805 PF00771 FHIPEP family DGM85_20820 PF00813 FliP family DGM85_20825 PF01313 Bacterial export proteins, family 3 DGM85_20870 PF01609 Transposase DDE domain DGM85_20870 PF05598 Transposase domain (DUF772) DGM85_20875 PF05819 NolX protein DGM85_20900 PF01040 UbiA prenyltransferase family DGM85_20910 PF06968 Biotin and Thiamin Synthesis associated domain DGM85_20910 PF04055 Radical SAM superfamily DGM85_20915 PF00155 Aminotransferase class I and II DGM85_20925 PF12697 Alpha/beta hydrolase family DGM85_20935 PF13649 Methyltransferase domain DGM85_20960 PF00291 Pyridoxal-phosphate dependent enzyme DGM85_20970 PF01134 Glucose inhibited division protein A DGM85_20970 PF13932 GidA associated domain DGM85_20980 PF07859 alpha/beta hydrolase fold DGM85_20990 PF09339 IclR helix-turn-helix domain DGM85_20990 PF01614 Bacterial transcriptional regulator DGM85_21000 PF02627 Carboxymuconolactone decarboxylase family DGM85_21005 PF12146 Serine aminopeptidase, S33 DGM85_21010 PF10397 Adenylosuccinate lyase C-terminus DGM85_21010 PF00206 Lyase DGM85_21020 PF00775 Dioxygenase DGM85_21020 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal DGM85_21025 PF02803 Thiolase, C-terminal domain DGM85_21025 PF00108 Thiolase, N-terminal domain DGM85_21035 PF01144 Coenzyme A transferase DGM85_21040 PF00355 Rieske [2Fe-2S] domain DGM85_21045 PF00970 Oxidoreductase FAD-binding domain DGM85_21045 PF00111 2Fe-2S iron-sulfur cluster binding domain DGM85_21050 PF00455 DeoR C terminal sensor domain DGM85_21050 PF08220 DeoR-like helix-turn-helix domain DGM85_21055 PF01266 FAD dependent oxidoreductase DGM85_21055 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DGM85_21060 PF00230 Major intrinsic protein DGM85_21075 PF01494 FAD binding domain DGM85_21085 PF00171 Aldehyde dehydrogenase family DGM85_21105 PF11871 Domain of unknown function (DUF3391) DGM85_21105 PF01966 HD domain DGM85_21110 PF07690 Major Facilitator Superfamily DGM85_21120 PF00132 Bacterial transferase hexapeptide (six repeats) DGM85_21135 PF00920 Dehydratase family DGM85_21165 PF01638 HxlR-like helix-turn-helix DGM85_21170 PF05368 NmrA-like family DGM85_21190 PF03812 2-keto-3-deoxygluconate permease DGM85_21195 PF01717 Cobalamin-independent synthase, Catalytic domain DGM85_21195 PF08267 Cobalamin-independent synthase, N-terminal domain DGM85_21205 PF03358 NADPH-dependent FMN reductase DGM85_21210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM85_21210 PF03466 LysR substrate binding domain DGM85_21215 PF02677 Epoxyqueuosine reductase QueH DGM85_21235 PF00873 AcrB/AcrD/AcrF family DGM85_21240 PF00529 HlyD membrane-fusion protein of T1SS DGM85_21240 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DGM85_21245 PF00672 HAMP domain DGM85_21245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM85_21245 PF00512 His Kinase A (phospho-acceptor) domain DGM85_21250 PF00072 Response regulator receiver domain DGM85_21250 PF00486 Transcriptional regulatory protein, C terminal DGM85_21255 PF00551 Formyl transferase DGM85_21265 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DGM85_21265 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DGM85_21270 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DGM85_21275 PF02146 Sir2 family DGM85_21280 PF00561 alpha/beta hydrolase fold DGM85_21290 PF07690 Major Facilitator Superfamily DGM85_21295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM85_21295 PF03466 LysR substrate binding domain DGM85_21310 PF01026 TatD related DNase DGM85_21315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM85_21315 PF03466 LysR substrate binding domain DGM85_21320 PF00355 Rieske [2Fe-2S] domain DGM85_21325 PF00111 2Fe-2S iron-sulfur cluster binding domain DGM85_21335 PF00860 Permease family DGM85_21345 PF01156 Inosine-uridine preferring nucleoside hydrolase DGM85_21355 PF01425 Amidase DGM85_21370 PF00561 alpha/beta hydrolase fold DGM85_21375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM85_21375 PF03466 LysR substrate binding domain DGM85_21380 PF07687 Peptidase dimerisation domain DGM85_21380 PF01546 Peptidase family M20/M25/M40 DGM85_21385 PF00266 Aminotransferase class-V DGM85_21400 PF09349 OHCU decarboxylase DGM85_21400 PF01014 Uricase DGM85_21405 PF13454 FAD-NAD(P)-binding DGM85_21410 PF00576 HIUase/Transthyretin family DGM85_21415 PF07308 Protein of unknown function (DUF1456) DGM85_21430 PF04408 Helicase associated domain (HA2) DGM85_21430 PF00271 Helicase conserved C-terminal domain DGM85_21430 PF08482 ATP-dependent helicase C-terminal DGM85_21430 PF00270 DEAD/DEAH box helicase DGM85_21440 PF00849 RNA pseudouridylate synthase DGM85_21450 PF00248 Aldo/keto reductase family DGM85_21455 PF16884 N-terminal domain of oxidoreductase DGM85_21455 PF00107 Zinc-binding dehydrogenase DGM85_21475 PF02566 OsmC-like protein DGM85_21480 PF01047 MarR family DGM85_21485 PF03969 AFG1-like ATPase DGM85_21505 PF07683 Cobalamin synthesis protein cobW C-terminal domain DGM85_21505 PF02492 CobW/HypB/UreG, nucleotide-binding domain DGM85_21560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DGM85_21560 PF02770 Acyl-CoA dehydrogenase, middle domain DGM85_21560 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DGM85_21565 PF01039 Carboxyl transferase domain DGM85_21570 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DGM85_21570 PF00364 Biotin-requiring enzyme DGM85_21570 PF00289 Biotin carboxylase, N-terminal domain DGM85_21570 PF18140 Propionyl-coenzyme A carboxylase BT domain DGM85_21570 PF02785 Biotin carboxylase C-terminal domain DGM85_21575 PF00326 Prolyl oligopeptidase family DGM85_21600 PF00872 Transposase, Mutator family DGM85_21615 PF05598 Transposase domain (DUF772) DGM85_21615 PF01609 Transposase DDE domain DGM85_21630 PF00990 Diguanylate cyclase, GGDEF domain DGM85_21635 PF00463 Isocitrate lyase family DGM85_21640 PF01274 Malate synthase DGM85_21645 PF03466 LysR substrate binding domain DGM85_21645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM85_21650 PF00999 Sodium/hydrogen exchanger family DGM85_21655 PF12833 Helix-turn-helix domain DGM85_21685 PF01432 Peptidase family M3 DGM85_21690 PF01112 Asparaginase DGM85_21700 PF00472 RF-1 domain DGM85_21715 PF00849 RNA pseudouridylate synthase DGM85_21725 PF03109 ABC1 family DGM85_21740 PF07478 D-ala D-ala ligase C-terminus DGM85_21740 PF01820 D-ala D-ala ligase N-terminus DGM85_21755 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family DGM85_21760 PF00501 AMP-binding enzyme DGM85_21765 PF03692 Putative zinc- or iron-chelating domain DGM85_21770 PF00561 alpha/beta hydrolase fold DGM85_21775 PF13784 Fic/DOC family N-terminal DGM85_21775 PF02661 Fic/DOC family DGM85_21780 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DGM85_21780 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DGM85_21795 PF00588 SpoU rRNA Methylase family DGM85_21800 PF07690 Major Facilitator Superfamily DGM85_21815 PF00158 Sigma-54 interaction domain DGM85_21815 PF02954 Bacterial regulatory protein, Fis family DGM85_21815 PF00072 Response regulator receiver domain DGM85_21820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM85_21850 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DGM85_21850 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DGM85_21855 PF02556 Preprotein translocase subunit SecB DGM85_21860 PF00581 Rhodanese-like domain DGM85_21900 PF02803 Thiolase, C-terminal domain DGM85_21900 PF00108 Thiolase, N-terminal domain DGM85_21915 PF00080 Copper/zinc superoxide dismutase (SODC) DGM85_21920 PF00080 Copper/zinc superoxide dismutase (SODC) DGM85_21925 PF02954 Bacterial regulatory protein, Fis family DGM85_21925 PF00072 Response regulator receiver domain DGM85_21925 PF00158 Sigma-54 interaction domain DGM85_21930 PF00512 His Kinase A (phospho-acceptor) domain DGM85_21930 PF00989 PAS fold DGM85_21930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DGM85_21935 PF00909 Ammonium Transporter Family DGM85_21940 PF00543 Nitrogen regulatory protein P-II DGM85_21945 PF03951 Glutamine synthetase, beta-Grasp domain DGM85_21945 PF00120 Glutamine synthetase, catalytic domain DGM85_21955 PF02673 Bacitracin resistance protein BacA DGM85_21965 PF00107 Zinc-binding dehydrogenase DGM85_21965 PF08240 Alcohol dehydrogenase GroES-like domain DGM85_21990 PF03061 Thioesterase superfamily DGM85_22000 PF13091 PLD-like domain DGM85_22015 PF01883 Iron-sulfur cluster assembly protein DGM85_22015 PF10609 NUBPL iron-transfer P-loop NTPase DGM85_22045 PF12867 DinB superfamily DGM85_22045 PF03781 Sulfatase-modifying factor enzyme 1 DGM85_22055 PF00528 Binding-protein-dependent transport system inner membrane component DGM85_22060 PF00571 CBS domain DGM85_22060 PF00005 ABC transporter DGM85_22075 PF00005 ABC transporter DGM85_22085 PF01734 Patatin-like phospholipase DGM85_22090 PF00593 TonB dependent receptor DGM85_22090 PF07660 Secretin and TonB N terminus short domain DGM85_22090 PF07715 TonB-dependent Receptor Plug Domain DGM85_22095 PF01037 Lrp/AsnC ligand binding domain DGM85_22100 PF00351 Biopterin-dependent aromatic amino acid hydroxylase DGM85_22110 PF00657 GDSL-like Lipase/Acylhydrolase DGM85_22120 PF01609 Transposase DDE domain DGM85_22120 PF05598 Transposase domain (DUF772) DGM85_22130 PF04962 KduI/IolB family DGM85_22135 PF00356 Bacterial regulatory proteins, lacI family DGM85_22140 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain DGM85_22140 PF04616 Glycosyl hydrolases family 43 DGM85_22145 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DGM85_22155 PF03480 Bacterial extracellular solute-binding protein, family 7 DGM85_22165 PF07859 alpha/beta hydrolase fold DGM85_22165 PF13472 GDSL-like Lipase/Acylhydrolase family DGM85_22170 PF00135 Carboxylesterase family DGM85_22190 PF00128 Alpha amylase, catalytic domain DGM85_22190 PF02806 Alpha amylase, C-terminal all-beta domain DGM85_22190 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DGM85_22195 PF00128 Alpha amylase, catalytic domain DGM85_22195 PF16657 Maltogenic Amylase, C-terminal domain DGM85_22200 PF11896 Domain of unknown function (DUF3416) DGM85_22200 PF00128 Alpha amylase, catalytic domain DGM85_22215 PF05598 Transposase domain (DUF772) DGM85_22215 PF01609 Transposase DDE domain DGM85_22240 PF00872 Transposase, Mutator family DGM85_22260 PF01227 GTP cyclohydrolase I DGM85_22270 PF07869 Protein of unknown function (DUF1656) DGM85_22275 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DGM85_22275 PF00529 HlyD membrane-fusion protein of T1SS DGM85_22285 PF04632 Fusaric acid resistance protein family DGM85_22290 PF00083 Sugar (and other) transporter DGM85_22300 PF03466 LysR substrate binding domain DGM85_22300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM85_22305 PF00106 short chain dehydrogenase DGM85_22310 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family DGM85_22315 PF13396 Phospholipase_D-nuclease N-terminal DGM85_22315 PF13091 PLD-like domain DGM85_22370 PF00849 RNA pseudouridylate synthase DGM85_22410 PF06511 Type III secretion systems tip complex components DGM85_22455 PF07720 Tetratricopeptide repeat DGM85_22460 PF01312 FlhB HrpN YscU SpaS Family DGM85_22465 PF01311 Bacterial export proteins, family 1 DGM85_22470 PF01313 Bacterial export proteins, family 3 DGM85_22475 PF00813 FliP family DGM85_22495 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DGM85_22495 PF18269 T3SS EscN ATPase C-terminal domain DGM85_22495 PF02874 ATP synthase alpha/beta family, beta-barrel domain DGM85_22505 PF00771 FHIPEP family DGM85_22510 PF07201 HrpJ-like domain DGM85_22515 PF03958 Bacterial type II/III secretion system short domain DGM85_22515 PF00263 Bacterial type II and III secretion system protein DGM85_22530 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF DGM85_22540 PF01514 Secretory protein of YscJ/FliF family DGM85_22630 PF05598 Transposase domain (DUF772) DGM85_22630 PF01609 Transposase DDE domain DGM85_22660 PF02785 Biotin carboxylase C-terminal domain DGM85_22660 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DGM85_22660 PF00289 Biotin carboxylase, N-terminal domain DGM85_22665 PF01425 Amidase DGM85_22740 PF01381 Helix-turn-helix DGM85_22750 PF13538 UvrD-like helicase C-terminal domain DGM85_22755 PF12705 PD-(D/E)XK nuclease superfamily DGM85_22755 PF00580 UvrD/REP helicase N-terminal domain DGM85_22755 PF13361 UvrD-like helicase C-terminal domain DGM85_22760 PF17946 RecC C-terminal domain DGM85_22795 PF00005 ABC transporter DGM85_22800 PF02405 Permease MlaE DGM85_22805 PF02470 MlaD protein DGM85_22810 PF05494 MlaC protein DGM85_22820 PF04333 MlaA lipoprotein DGM85_22835 PF00255 Glutathione peroxidase DGM85_22845 PF02646 RmuC family DGM85_22850 PF08240 Alcohol dehydrogenase GroES-like domain DGM85_22850 PF00107 Zinc-binding dehydrogenase DGM85_22855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DGM85_22855 PF03466 LysR substrate binding domain DGM85_22875 PF13520 Amino acid permease DGM85_22880 PF07971 Glycosyl hydrolase family 92 DGM85_22880 PF17678 Glycosyl hydrolase family 92 N-terminal domain DGM85_22890 PF10947 Protein of unknown function (DUF2628) DGM85_22895 PF00990 Diguanylate cyclase, GGDEF domain DGM85_22900 PF17853 GGDEF-like domain DGM85_22900 PF13556 PucR C-terminal helix-turn-helix domain DGM85_22900 PF05651 Putative sugar diacid recognition DGM85_22905 PF02595 Glycerate kinase family DGM85_22925 PF10672 S-adenosylmethionine-dependent methyltransferase DGM85_22925 PF17785 PUA-like domain DGM85_22935 PF03741 Integral membrane protein TerC family DGM85_22950 PF01694 Rhomboid family DGM85_22955 PF03009 Glycerophosphoryl diester phosphodiesterase family DGM85_22965 PF01569 PAP2 superfamily DGM85_22970 PF01926 50S ribosome-binding GTPase DGM85_22970 PF10396 GTP-binding protein TrmE N-terminus DGM85_22970 PF12631 MnmE helical domain DGM85_22975 PF01522 Polysaccharide deacetylase DGM85_22980 PF02096 60Kd inner membrane protein DGM85_22980 PF14849 YidC periplasmic domain DGM85_22985 PF00825 Ribonuclease P DGM85_22990 PF00468 Ribosomal protein L34 DGM85_23050 PF12950 TaqI-like C-terminal specificity domain DGM85_23050 PF07669 Eco57I restriction-modification methylase DGM85_23055 PF17728 BsuBI/PstI restriction endonuclease HTH domain DGM85_23055 PF06616 BsuBI/PstI restriction endonuclease domain DGM85_23120 PF00872 Transposase, Mutator family DGM85_23165 PF02796 Helix-turn-helix domain of resolvase DGM85_23165 PF00239 Resolvase, N terminal domain DGM85_23175 PF01850 PIN domain DGM85_23230 PF03743 Bacterial conjugation TrbI-like protein DGM85_23245 PF04610 TrbL/VirB6 plasmid conjugal transfer protein DGM85_23255 PF03135 CagE, TrbE, VirB family, component of type IV transporter system DGM85_23270 PF00437 Type II/IV secretion system protein DGM85_23310 PF02534 Type IV secretory system Conjugative DNA transfer DGM85_23380 PF06067 Domain of unknown function (DUF932) DGM85_23390 PF00872 Transposase, Mutator family DGM85_23410 PF18495 Antitoxin VbhA DGM85_23420 PF02661 Fic/DOC family DGM85_23420 PF17841 BID domain of Bartonella effector protein (Bep) DGM85_23460 PF03230 Antirestriction protein DGM85_23495 PF00872 Transposase, Mutator family DGM85_23510 PF00872 Transposase, Mutator family DGM85_23545 PF02796 Helix-turn-helix domain of resolvase DGM85_23545 PF00239 Resolvase, N terminal domain DGM85_23555 PF01555 DNA methylase DGM85_23560 PF09571 XcyI restriction endonuclease DGM85_23625 PF01850 PIN domain DGM85_23635 PF00239 Resolvase, N terminal domain DGM85_23635 PF02796 Helix-turn-helix domain of resolvase DGM85_23670 PF11740 Plasmid replication region DNA-binding N-term DGM85_23705 PF03377 TAL effector repeat