locus-tag class description M0D43_00005 PF00501 AMP-binding enzyme M0D43_00005 PF13193 AMP-binding enzyme C-terminal domain M0D43_00005 PF00668 Condensation domain M0D43_00005 PF00550 Phosphopantetheine attachment site M0D43_00005 PF00975 Thioesterase domain M0D43_00010 PF00975 Thioesterase domain M0D43_00010 PF00550 Phosphopantetheine attachment site M0D43_00010 PF00668 Condensation domain M0D43_00010 PF00501 AMP-binding enzyme M0D43_00010 PF13193 AMP-binding enzyme C-terminal domain M0D43_00015 PF13193 AMP-binding enzyme C-terminal domain M0D43_00015 PF00550 Phosphopantetheine attachment site M0D43_00015 PF00668 Condensation domain M0D43_00015 PF00501 AMP-binding enzyme M0D43_00030 PF00155 Aminotransferase class I and II M0D43_00035 PF01070 FMN-dependent dehydrogenase M0D43_00040 PF00202 Aminotransferase class-III M0D43_00060 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase M0D43_00060 PF02585 GlcNAc-PI de-N-acetylase M0D43_00080 PF01494 FAD binding domain M0D43_00085 PF09335 SNARE associated Golgi protein M0D43_00095 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M0D43_00100 PF07995 Glucose / Sorbosone dehydrogenase M0D43_00110 PF00144 Beta-lactamase M0D43_00115 PF00072 Response regulator receiver domain M0D43_00115 PF04397 LytTr DNA-binding domain M0D43_00120 PF06580 Histidine kinase M0D43_00120 PF07694 5TMR of 5TMR-LYT M0D43_00120 PF13492 GAF domain M0D43_00120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_00125 PF03797 Autotransporter beta-domain M0D43_00125 PF00082 Subtilase family M0D43_00130 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M0D43_00135 PF00873 AcrB/AcrD/AcrF family M0D43_00145 PF13426 PAS domain M0D43_00145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_00145 PF00072 Response regulator receiver domain M0D43_00145 PF08448 PAS fold M0D43_00145 PF00512 His Kinase A (phospho-acceptor) domain M0D43_00150 PF00196 Bacterial regulatory proteins, luxR family M0D43_00150 PF00072 Response regulator receiver domain M0D43_00155 PF12951 Passenger-associated-transport-repeat M0D43_00160 PF08448 PAS fold M0D43_00160 PF08447 PAS fold M0D43_00160 PF00990 Diguanylate cyclase, GGDEF domain M0D43_00160 PF00563 EAL domain M0D43_00185 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M0D43_00190 PF04324 BFD-like [2Fe-2S] binding domain M0D43_00190 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M0D43_00190 PF00384 Molybdopterin oxidoreductase M0D43_00190 PF01568 Molydopterin dinucleotide binding domain M0D43_00200 PF04324 BFD-like [2Fe-2S] binding domain M0D43_00200 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M0D43_00200 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M0D43_00200 PF18267 Rubredoxin NAD+ reductase C-terminal domain M0D43_00200 PF07992 Pyridine nucleotide-disulphide oxidoreductase M0D43_00205 PF07690 Major Facilitator Superfamily M0D43_00215 PF00072 Response regulator receiver domain M0D43_00215 PF03861 ANTAR domain M0D43_00220 PF10414 Sirohaem synthase dimerisation region M0D43_00220 PF14824 Sirohaem biosynthesis protein central M0D43_00220 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M0D43_00230 PF12804 MobA-like NTP transferase domain M0D43_00235 PF00994 Probable molybdopterin binding domain M0D43_00235 PF03454 MoeA C-terminal region (domain IV) M0D43_00235 PF03453 MoeA N-terminal region (domain I and II) M0D43_00245 PF03372 Endonuclease/Exonuclease/phosphatase family M0D43_00255 PF00899 ThiF family M0D43_00260 PF00994 Probable molybdopterin binding domain M0D43_00260 PF03453 MoeA N-terminal region (domain I and II) M0D43_00260 PF03454 MoeA C-terminal region (domain IV) M0D43_00265 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal M0D43_00265 PF01926 50S ribosome-binding GTPase M0D43_00270 PF01011 PQQ enzyme repeat M0D43_00270 PF13360 PQQ-like domain M0D43_00280 PF13464 Domain of unknown function (DUF4115) M0D43_00290 PF04055 Radical SAM superfamily M0D43_00295 PF00334 Nucleoside diphosphate kinase M0D43_00305 PF00378 Enoyl-CoA hydratase/isomerase M0D43_00305 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M0D43_00305 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M0D43_00310 PF02803 Thiolase, C-terminal domain M0D43_00310 PF00108 Thiolase, N-terminal domain M0D43_00315 PF02537 CrcB-like protein, Camphor Resistance (CrcB) M0D43_00320 PF00004 ATPase family associated with various cellular activities (AAA) M0D43_00320 PF16193 AAA C-terminal domain M0D43_00320 PF12002 MgsA AAA+ ATPase C terminal M0D43_00330 PF03548 Outer membrane lipoprotein carrier protein LolA M0D43_00340 PF01580 FtsK/SpoIIIE family M0D43_00340 PF13491 4TM region of DNA translocase FtsK/SpoIIIE M0D43_00340 PF17854 FtsK alpha domain M0D43_00340 PF09397 Ftsk gamma domain M0D43_00345 PF07992 Pyridine nucleotide-disulphide oxidoreductase M0D43_00355 PF03588 Leucyl/phenylalanyl-tRNA protein transferase M0D43_00360 PF01176 Translation initiation factor 1A / IF-1 M0D43_00365 PF00004 ATPase family associated with various cellular activities (AAA) M0D43_00365 PF07724 AAA domain (Cdc48 subfamily) M0D43_00365 PF17871 AAA lid domain M0D43_00365 PF02861 Clp amino terminal domain, pathogenicity island component M0D43_00365 PF10431 C-terminal, D2-small domain, of ClpB protein M0D43_00370 PF02617 ATP-dependent Clp protease adaptor protein ClpS M0D43_00380 PF00293 NUDIX domain M0D43_00390 PF04356 Protein of unknown function (DUF489) M0D43_00395 PF12729 Four helix bundle sensory module for signal transduction M0D43_00395 PF00672 HAMP domain M0D43_00395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D43_00410 PF00563 EAL domain M0D43_00410 PF00990 Diguanylate cyclase, GGDEF domain M0D43_00410 PF03707 Bacterial signalling protein N terminal repeat M0D43_00415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_00415 PF07730 Histidine kinase M0D43_00420 PF00990 Diguanylate cyclase, GGDEF domain M0D43_00420 PF03707 Bacterial signalling protein N terminal repeat M0D43_00420 PF00563 EAL domain M0D43_00425 PF00512 His Kinase A (phospho-acceptor) domain M0D43_00425 PF13426 PAS domain M0D43_00425 PF13188 PAS domain M0D43_00425 PF00989 PAS fold M0D43_00425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_00445 PF00072 Response regulator receiver domain M0D43_00445 PF01584 CheW-like domain M0D43_00455 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M0D43_00455 PF00460 Flagella basal body rod protein M0D43_00460 PF03963 Flagellar hook capping protein - N-terminal region M0D43_00465 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M0D43_00465 PF00460 Flagella basal body rod protein M0D43_00465 PF07559 Flagellar basal body protein FlaE M0D43_00470 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M0D43_00470 PF00460 Flagella basal body rod protein M0D43_00475 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M0D43_00475 PF00460 Flagella basal body rod protein M0D43_00480 PF02107 Flagellar L-ring protein M0D43_00485 PF02119 Flagellar P-ring protein M0D43_00490 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase M0D43_00490 PF10135 Rod binding protein M0D43_00495 PF07196 Flagellin hook IN motif M0D43_00495 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M0D43_00500 PF00700 Bacterial flagellin C-terminal helical region M0D43_00500 PF00669 Bacterial flagellin N-terminal helical region M0D43_00510 PF00700 Bacterial flagellin C-terminal helical region M0D43_00510 PF00669 Bacterial flagellin N-terminal helical region M0D43_00515 PF07196 Flagellin hook IN motif M0D43_00515 PF02465 Flagellar hook-associated protein 2 N-terminus M0D43_00515 PF07195 Flagellar hook-associated protein 2 C-terminus M0D43_00520 PF02561 Flagellar protein FliS M0D43_00540 PF00072 Response regulator receiver domain M0D43_00540 PF00196 Bacterial regulatory proteins, luxR family M0D43_00545 PF00309 Sigma-54 factor, Activator interacting domain (AID) M0D43_00545 PF04552 Sigma-54, DNA binding domain M0D43_00545 PF04963 Sigma-54 factor, core binding domain M0D43_00550 PF00072 Response regulator receiver domain M0D43_00550 PF01339 CheB methylesterase M0D43_00555 PF06490 Flagellar regulatory protein FleQ M0D43_00555 PF00158 Sigma-54 interaction domain M0D43_00555 PF02954 Bacterial regulatory protein, Fis family M0D43_00560 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family M0D43_00570 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M0D43_00570 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M0D43_00615 PF02348 Cytidylyltransferase M0D43_00640 PF00535 Glycosyl transferase family 2 M0D43_00640 PF00534 Glycosyl transferases group 1 M0D43_00645 PF02049 Flagellar hook-basal body complex protein FliE M0D43_00650 PF08345 Flagellar M-ring protein C-terminal M0D43_00650 PF01514 Secretory protein of YscJ/FliF family M0D43_00655 PF01706 FliG C-terminal domain M0D43_00655 PF14841 FliG middle domain M0D43_00655 PF14842 FliG N-terminal domain M0D43_00665 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M0D43_00665 PF18269 T3SS EscN ATPase C-terminal domain M0D43_00685 PF02154 Flagellar motor switch protein FliM M0D43_00685 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term M0D43_00690 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term M0D43_00695 PF04347 Flagellar biosynthesis protein, FliO M0D43_00700 PF00813 FliP family M0D43_00705 PF01313 Bacterial export proteins, family 3 M0D43_00710 PF01311 Bacterial export proteins, family 1 M0D43_00715 PF00990 Diguanylate cyclase, GGDEF domain M0D43_00720 PF00990 Diguanylate cyclase, GGDEF domain M0D43_00725 PF03707 Bacterial signalling protein N terminal repeat M0D43_00725 PF00563 EAL domain M0D43_00725 PF00990 Diguanylate cyclase, GGDEF domain M0D43_00730 PF01312 FlhB HrpN YscU SpaS Family M0D43_00735 PF00771 FHIPEP family M0D43_00740 PF00448 SRP54-type protein, GTPase domain M0D43_00745 PF10609 NUBPL iron-transfer P-loop NTPase M0D43_00750 PF04542 Sigma-70 region 2 M0D43_00750 PF04539 Sigma-70 region 3 M0D43_00750 PF04545 Sigma-70, region 4 M0D43_00755 PF00072 Response regulator receiver domain M0D43_00760 PF04344 Chemotaxis phosphatase, CheZ M0D43_00765 PF01584 CheW-like domain M0D43_00765 PF02895 Signal transducing histidine kinase, homodimeric domain M0D43_00765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_00765 PF00072 Response regulator receiver domain M0D43_00765 PF01627 Hpt domain M0D43_00840 PF13180 PDZ domain M0D43_00840 PF03572 Peptidase family S41 M0D43_00845 PF01618 MotA/TolQ/ExbB proton channel family M0D43_00850 PF13677 Membrane MotB of proton-channel complex MotA/MotB M0D43_00850 PF00691 OmpA family M0D43_00855 PF13614 AAA domain M0D43_00860 PF01584 CheW-like domain M0D43_00870 PF00072 Response regulator receiver domain M0D43_00875 PF09078 CheY binding M0D43_00875 PF02895 Signal transducing histidine kinase, homodimeric domain M0D43_00875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_00875 PF01627 Hpt domain M0D43_00875 PF01584 CheW-like domain M0D43_00880 PF00672 HAMP domain M0D43_00880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D43_00880 PF02203 Tar ligand binding domain homologue M0D43_00890 PF00672 HAMP domain M0D43_00890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D43_00890 PF02203 Tar ligand binding domain homologue M0D43_00895 PF02203 Tar ligand binding domain homologue M0D43_00895 PF00672 HAMP domain M0D43_00895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D43_00905 PF02203 Tar ligand binding domain homologue M0D43_00905 PF00672 HAMP domain M0D43_00905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D43_00910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D43_00910 PF00672 HAMP domain M0D43_00915 PF02203 Tar ligand binding domain homologue M0D43_00915 PF00672 HAMP domain M0D43_00915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D43_00920 PF02203 Tar ligand binding domain homologue M0D43_00920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D43_00920 PF00672 HAMP domain M0D43_00925 PF02203 Tar ligand binding domain homologue M0D43_00925 PF00672 HAMP domain M0D43_00925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D43_00930 PF02203 Tar ligand binding domain homologue M0D43_00930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D43_00930 PF00672 HAMP domain M0D43_00935 PF00672 HAMP domain M0D43_00935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D43_00935 PF02203 Tar ligand binding domain homologue M0D43_00940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D43_00940 PF02203 Tar ligand binding domain homologue M0D43_00940 PF00672 HAMP domain M0D43_00945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D43_00945 PF02203 Tar ligand binding domain homologue M0D43_00945 PF00672 HAMP domain M0D43_00950 PF07317 Flagellar regulator YcgR M0D43_00950 PF07238 PilZ domain M0D43_00955 PF01584 CheW-like domain M0D43_00965 PF00672 HAMP domain M0D43_00965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D43_00965 PF02203 Tar ligand binding domain homologue M0D43_00970 PF03705 CheR methyltransferase, all-alpha domain M0D43_00970 PF01739 CheR methyltransferase, SAM binding domain M0D43_00975 PF03975 CheD chemotactic sensory transduction M0D43_00980 PF00072 Response regulator receiver domain M0D43_00980 PF01339 CheB methylesterase M0D43_00985 PF03707 Bacterial signalling protein N terminal repeat M0D43_00985 PF00990 Diguanylate cyclase, GGDEF domain M0D43_00985 PF00563 EAL domain M0D43_00995 PF00561 alpha/beta hydrolase fold M0D43_01000 PF00330 Aconitase family (aconitate hydratase) M0D43_01000 PF11791 Aconitate B N-terminal domain M0D43_01000 PF06434 Aconitate hydratase 2 N-terminus M0D43_01015 PF00694 Aconitase C-terminal domain M0D43_01015 PF00330 Aconitase family (aconitate hydratase) M0D43_01025 PF13193 AMP-binding enzyme C-terminal domain M0D43_01025 PF00501 AMP-binding enzyme M0D43_01030 PF00378 Enoyl-CoA hydratase/isomerase M0D43_01035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_01035 PF01627 Hpt domain M0D43_01035 PF00512 His Kinase A (phospho-acceptor) domain M0D43_01035 PF00072 Response regulator receiver domain M0D43_01040 PF00072 Response regulator receiver domain M0D43_01045 PF00152 tRNA synthetases class II (D, K and N) M0D43_01045 PF01336 OB-fold nucleic acid binding domain M0D43_01055 PF04397 LytTr DNA-binding domain M0D43_01055 PF00072 Response regulator receiver domain M0D43_01070 PF01368 DHH family M0D43_01070 PF02272 DHHA1 domain M0D43_01070 PF17768 RecJ OB domain M0D43_01080 PF01272 Transcription elongation factor, GreA/GreB, C-term M0D43_01080 PF03449 Transcription elongation factor, N-terminal M0D43_01085 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain M0D43_01085 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M0D43_01085 PF02142 MGS-like domain M0D43_01095 PF00117 Glutamine amidotransferase class-I M0D43_01095 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain M0D43_01100 PF01113 Dihydrodipicolinate reductase, N-terminus M0D43_01100 PF05173 Dihydrodipicolinate reductase, C-terminus M0D43_01110 PF03473 MOSC domain M0D43_01110 PF03475 3-alpha domain M0D43_01115 PF00155 Aminotransferase class I and II M0D43_01135 PF07670 Nucleoside recognition M0D43_01135 PF02421 Ferrous iron transport protein B M0D43_01135 PF07664 Ferrous iron transport protein B C terminus M0D43_01145 PF00378 Enoyl-CoA hydratase/isomerase M0D43_01150 PF00682 HMGL-like M0D43_01155 PF00106 short chain dehydrogenase M0D43_01160 PF08207 Elongation factor P (EF-P) KOW-like domain M0D43_01160 PF09285 Elongation factor P, C-terminal M0D43_01160 PF01132 Elongation factor P (EF-P) OB domain M0D43_01180 PF01565 FAD binding domain M0D43_01180 PF02913 FAD linked oxidases, C-terminal domain M0D43_01185 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M0D43_01185 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M0D43_01195 PF13520 Amino acid permease M0D43_01200 PF13520 Amino acid permease M0D43_01205 PF00596 Class II Aldolase and Adducin N-terminal domain M0D43_01210 PF03079 ARD/ARD' family M0D43_01230 PF01502 Phosphoribosyl-AMP cyclohydrolase M0D43_01230 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase M0D43_01235 PF00977 Histidine biosynthesis protein M0D43_01240 PF00977 Histidine biosynthesis protein M0D43_01245 PF00117 Glutamine amidotransferase class-I M0D43_01250 PF00475 Imidazoleglycerol-phosphate dehydratase M0D43_01255 PF00155 Aminotransferase class I and II M0D43_01260 PF00815 Histidinol dehydrogenase M0D43_01265 PF01634 ATP phosphoribosyltransferase M0D43_01265 PF08029 HisG, C-terminal domain M0D43_01275 PF13393 Histidyl-tRNA synthetase M0D43_01275 PF03129 Anticodon binding domain M0D43_01285 PF00027 Cyclic nucleotide-binding domain M0D43_01285 PF13545 Crp-like helix-turn-helix domain M0D43_01295 PF14821 Threonine synthase N terminus M0D43_01295 PF00291 Pyridoxal-phosphate dependent enzyme M0D43_01305 PF00288 GHMP kinases N terminal domain M0D43_01305 PF08544 GHMP kinases C terminal M0D43_01310 PF13840 ACT domain M0D43_01310 PF00742 Homoserine dehydrogenase M0D43_01310 PF03447 Homoserine dehydrogenase, NAD binding domain M0D43_01310 PF01842 ACT domain M0D43_01310 PF00696 Amino acid kinase family M0D43_01315 PF03073 TspO/MBR family M0D43_01325 PF13332 Hemagglutinin repeat M0D43_01325 PF05860 haemagglutination activity domain M0D43_01325 PF04829 Pre-toxin domain with VENN motif M0D43_01340 PF13332 Hemagglutinin repeat M0D43_01340 PF05860 haemagglutination activity domain M0D43_01340 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain M0D43_01340 PF13018 Extended Signal Peptide of Type V secretion system M0D43_01340 PF05594 Haemagluttinin repeat M0D43_01345 PF08479 POTRA domain, ShlB-type M0D43_01345 PF17287 POTRA domain M0D43_01345 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB M0D43_01360 PF00171 Aldehyde dehydrogenase family M0D43_01375 PF01180 Dihydroorotate dehydrogenase M0D43_01380 PF01565 FAD binding domain M0D43_01380 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain M0D43_01385 PF00892 EamA-like transporter family M0D43_01390 PF01177 Asp/Glu/Hydantoin racemase M0D43_01395 PF07690 Major Facilitator Superfamily M0D43_01400 PF01569 PAP2 superfamily M0D43_01405 PF04551 GcpE protein M0D43_01415 PF00072 Response regulator receiver domain M0D43_01420 PF00150 Cellulase (glycosyl hydrolase family 5) M0D43_01420 PF02013 Cellulose or protein binding domain M0D43_01425 PF01590 GAF domain M0D43_01425 PF00990 Diguanylate cyclase, GGDEF domain M0D43_01425 PF00360 Phytochrome region M0D43_01425 PF00563 EAL domain M0D43_01430 PF00474 Sodium:solute symporter family M0D43_01435 PF14310 Fibronectin type III-like domain M0D43_01435 PF00933 Glycosyl hydrolase family 3 N terminal domain M0D43_01435 PF01915 Glycosyl hydrolase family 3 C-terminal domain M0D43_01460 PF00342 Phosphoglucose isomerase M0D43_01465 PF02261 Aspartate decarboxylase M0D43_01470 PF02569 Pantoate-beta-alanine ligase M0D43_01475 PF02548 Ketopantoate hydroxymethyltransferase M0D43_01480 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) M0D43_01485 PF12627 Probable RNA and SrmB- binding site of polymerase A M0D43_01485 PF12626 Polymerase A arginine-rich C-terminus M0D43_01485 PF01743 Poly A polymerase head domain M0D43_01495 PF02649 Type I GTP cyclohydrolase folE2 M0D43_01500 PF01520 N-acetylmuramoyl-L-alanine amidase M0D43_01520 PF00083 Sugar (and other) transporter M0D43_01530 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M0D43_01530 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M0D43_01540 PF16338 Domain of unknown function (DUF4968) M0D43_01540 PF17137 Domain of unknown function (DUF5110) M0D43_01540 PF01055 Glycosyl hydrolases family 31 M0D43_01550 PF02837 Glycosyl hydrolases family 2, sugar binding domain M0D43_01550 PF02836 Glycosyl hydrolases family 2, TIM barrel domain M0D43_01550 PF16353 Domain of unknown function(DUF4981) M0D43_01550 PF02929 Beta galactosidase small chain M0D43_01550 PF00703 Glycosyl hydrolases family 2 M0D43_01555 PF03442 Carbohydrate binding domain X2 M0D43_01555 PF00942 Cellulose binding domain M0D43_01575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D43_01575 PF03466 LysR substrate binding domain M0D43_01580 PF01081 KDPG and KHG aldolase M0D43_01585 PF13378 Enolase C-terminal domain-like M0D43_01585 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M0D43_01590 PF08450 SMP-30/Gluconolactonase/LRE-like region M0D43_01595 PF05035 2-keto-3-deoxy-galactonokinase M0D43_01600 PF11953 Domain of unknown function (DUF3470) M0D43_01600 PF00037 4Fe-4S binding domain M0D43_01610 PF00701 Dihydrodipicolinate synthetase family M0D43_01625 PF00578 AhpC/TSA family M0D43_01630 PF13638 PIN domain M0D43_01630 PF02562 PhoH-like protein M0D43_01645 PF08543 Phosphomethylpyrimidine kinase M0D43_01645 PF02581 Thiamine monophosphate synthase M0D43_01670 PF03466 LysR substrate binding domain M0D43_01670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D43_01675 PF02678 Pirin M0D43_01675 PF17954 Quercetinase C-terminal cupin domain M0D43_01680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D43_01680 PF08447 PAS fold M0D43_01680 PF13426 PAS domain M0D43_01690 PF02599 Global regulator protein family M0D43_01695 PF02272 DHHA1 domain M0D43_01695 PF01411 tRNA synthetases class II (A) M0D43_01695 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M0D43_01700 PF02631 RecX family M0D43_01705 PF00154 recA bacterial DNA recombination protein M0D43_01710 PF00717 Peptidase S24-like M0D43_01710 PF01726 LexA DNA binding domain M0D43_01715 PF03109 ABC1 family M0D43_01720 PF02464 Competence-damaged protein M0D43_01725 PF16360 GTP-binding GTPase Middle Region M0D43_01725 PF13167 GTP-binding GTPase N-terminal M0D43_01725 PF01926 50S ribosome-binding GTPase M0D43_01730 PF17209 Hfq protein M0D43_01740 PF00809 Pterin binding enzyme M0D43_01745 PF00004 ATPase family associated with various cellular activities (AAA) M0D43_01745 PF17862 AAA+ lid domain M0D43_01745 PF06480 FtsH Extracellular M0D43_01745 PF01434 Peptidase family M41 M0D43_01750 PF01728 FtsJ-like methyltransferase M0D43_01755 PF01985 CRS1 / YhbY (CRM) domain M0D43_01760 PF04430 Protein of unknown function (DUF498/DUF598) M0D43_01765 PF01476 LysM domain M0D43_01765 PF01551 Peptidase family M23 M0D43_01770 PF09335 SNARE associated Golgi protein M0D43_01780 PF01975 Survival protein SurE M0D43_01785 PF01713 Smr domain M0D43_01790 PF01142 tRNA pseudouridine synthase D (TruD) M0D43_01795 PF02542 YgbB family M0D43_01800 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase M0D43_01805 PF04977 Septum formation initiator M0D43_01810 PF00113 Enolase, C-terminal TIM barrel domain M0D43_01810 PF03952 Enolase, N-terminal domain M0D43_01820 PF00793 DAHP synthetase I family M0D43_01825 PF06418 CTP synthase N-terminus M0D43_01825 PF00117 Glutamine amidotransferase class-I M0D43_01835 PF00986 DNA gyrase B subunit, carboxyl terminus M0D43_01835 PF01751 Toprim domain M0D43_01835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_01835 PF00204 DNA gyrase B M0D43_01845 PF02698 DUF218 domain M0D43_01850 PF01384 Phosphate transporter family M0D43_01860 PF00571 CBS domain M0D43_01860 PF03471 Transporter associated domain M0D43_01860 PF01595 Cyclin M transmembrane N-terminal domain M0D43_01875 PF00296 Luciferase-like monooxygenase M0D43_01880 PF07690 Major Facilitator Superfamily M0D43_01885 PF00664 ABC transporter transmembrane region M0D43_01885 PF00005 ABC transporter M0D43_01890 PF06745 KaiC M0D43_01905 PF00534 Glycosyl transferases group 1 M0D43_01905 PF13579 Glycosyl transferase 4-like domain M0D43_01920 PF13382 Adenine deaminase C-terminal domain M0D43_01920 PF01979 Amidohydrolase family M0D43_01925 PF08241 Methyltransferase domain M0D43_01940 PF00535 Glycosyl transferase family 2 M0D43_01945 PF01943 Polysaccharide biosynthesis protein M0D43_01950 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family M0D43_01970 PF05523 WxcM-like, C-terminal M0D43_01985 PF00034 Cytochrome c M0D43_01995 PF04542 Sigma-70 region 2 M0D43_01995 PF08281 Sigma-70, region 4 M0D43_02005 PF00082 Subtilase family M0D43_02010 PF01578 Cytochrome C assembly protein M0D43_02015 PF04995 Heme exporter protein D (CcmD) M0D43_02020 PF03100 CcmE M0D43_02025 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal M0D43_02025 PF01578 Cytochrome C assembly protein M0D43_02030 PF08534 Redoxin M0D43_02035 PF03918 Cytochrome C biogenesis protein M0D43_02045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_02045 PF13426 PAS domain M0D43_02045 PF00072 Response regulator receiver domain M0D43_02050 PF06745 KaiC M0D43_02055 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M0D43_02055 PF00672 HAMP domain M0D43_02055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_02055 PF00512 His Kinase A (phospho-acceptor) domain M0D43_02055 PF01627 Hpt domain M0D43_02055 PF00072 Response regulator receiver domain M0D43_02060 PF08448 PAS fold M0D43_02060 PF13188 PAS domain M0D43_02060 PF00072 Response regulator receiver domain M0D43_02060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_02060 PF00512 His Kinase A (phospho-acceptor) domain M0D43_02070 PF01494 FAD binding domain M0D43_02075 PF00672 HAMP domain M0D43_02075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D43_02075 PF02203 Tar ligand binding domain homologue M0D43_02090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D43_02090 PF03466 LysR substrate binding domain M0D43_02095 PF02525 Flavodoxin-like fold M0D43_02100 PF02403 Seryl-tRNA synthetase N-terminal domain M0D43_02100 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M0D43_02105 PF03544 Gram-negative bacterial TonB protein C-terminal M0D43_02115 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M0D43_02120 PF01842 ACT domain M0D43_02120 PF01817 Chorismate mutase type II M0D43_02120 PF00800 Prephenate dehydratase M0D43_02125 PF00266 Aminotransferase class-V M0D43_02130 PF00174 Oxidoreductase molybdopterin binding domain M0D43_02135 PF01794 Ferric reductase like transmembrane component M0D43_02160 PF07702 UTRA domain M0D43_02160 PF00392 Bacterial regulatory proteins, gntR family M0D43_02170 PF07969 Amidohydrolase family M0D43_02175 PF00221 Aromatic amino acid lyase M0D43_02185 PF01175 Urocanase Rossmann-like domain M0D43_02185 PF17392 Urocanase C-terminal domain M0D43_02185 PF17391 Urocanase N-terminal domain M0D43_02200 PF13360 PQQ-like domain M0D43_02210 PF00521 DNA gyrase/topoisomerase IV, subunit A M0D43_02210 PF03989 DNA gyrase C-terminal domain, beta-propeller M0D43_02215 PF01008 Initiation factor 2 subunit family M0D43_02230 PF00152 tRNA synthetases class II (D, K and N) M0D43_02235 PF00533 BRCA1 C Terminus (BRCT) domain M0D43_02235 PF12826 Helix-hairpin-helix motif M0D43_02235 PF03119 NAD-dependent DNA ligase C4 zinc finger domain M0D43_02235 PF03120 NAD-dependent DNA ligase OB-fold domain M0D43_02235 PF01653 NAD-dependent DNA ligase adenylation domain M0D43_02240 PF00155 Aminotransferase class I and II M0D43_02250 PF04354 ZipA, C-terminal FtsZ-binding domain M0D43_02255 PF02463 RecF/RecN/SMC N terminal domain M0D43_02260 PF01281 Ribosomal protein L9, N-terminal domain M0D43_02260 PF03948 Ribosomal protein L9, C-terminal domain M0D43_02265 PF01084 Ribosomal protein S18 M0D43_02270 PF01250 Ribosomal protein S6 M0D43_02275 PF01521 Iron-sulphur cluster biosynthesis M0D43_02280 PF00152 tRNA synthetases class II (D, K and N) M0D43_02280 PF01336 OB-fold nucleic acid binding domain M0D43_02305 PF00484 Carbonic anhydrase M0D43_02310 PF06052 3-hydroxyanthranilic acid dioxygenase M0D43_02320 PF00266 Aminotransferase class-V M0D43_02325 PF01494 FAD binding domain M0D43_02330 PF08411 Exonuclease C-terminal M0D43_02330 PF00929 Exonuclease M0D43_02340 PF00248 Aldo/keto reductase family M0D43_02355 PF01513 ATP-NAD kinase M0D43_02360 PF02926 THUMP domain M0D43_02360 PF01170 Putative RNA methylase family UPF0020 M0D43_02360 PF10672 S-adenosylmethionine-dependent methyltransferase M0D43_02395 PF00581 Rhodanese-like domain M0D43_02400 PF00293 NUDIX domain M0D43_02405 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M0D43_02405 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M0D43_02410 PF00378 Enoyl-CoA hydratase/isomerase M0D43_02420 PF10576 Iron-sulfur binding domain of endonuclease III M0D43_02420 PF00633 Helix-hairpin-helix motif M0D43_02420 PF00730 HhH-GPD superfamily base excision DNA repair protein M0D43_02430 PF00484 Carbonic anhydrase M0D43_02445 PF12849 PBP superfamily domain M0D43_02450 PF12849 PBP superfamily domain M0D43_02455 PF00528 Binding-protein-dependent transport system inner membrane component M0D43_02460 PF00528 Binding-protein-dependent transport system inner membrane component M0D43_02465 PF00005 ABC transporter M0D43_02470 PF01895 PhoU domain M0D43_02480 PF00929 Exonuclease M0D43_02485 PF00990 Diguanylate cyclase, GGDEF domain M0D43_02490 PF00588 SpoU rRNA Methylase family M0D43_02490 PF08032 RNA 2'-O ribose methyltransferase substrate binding M0D43_02500 PF17876 Cold shock domain M0D43_02500 PF08461 Ribonuclease R winged-helix domain M0D43_02500 PF08206 Ribonuclease B OB domain M0D43_02500 PF00773 RNB domain M0D43_02500 PF00575 S1 RNA binding domain M0D43_02515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M0D43_02515 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M0D43_02515 PF02770 Acyl-CoA dehydrogenase, middle domain M0D43_02520 PF01209 ubiE/COQ5 methyltransferase family M0D43_02525 PF00809 Pterin binding enzyme M0D43_02525 PF02574 Homocysteine S-methyltransferase M0D43_02535 PF00809 Pterin binding enzyme M0D43_02535 PF02574 Homocysteine S-methyltransferase M0D43_02535 PF02607 B12 binding domain M0D43_02535 PF02965 Vitamin B12 dependent methionine synthase, activation domain M0D43_02535 PF02310 B12 binding domain M0D43_02545 PF00294 pfkB family carbohydrate kinase M0D43_02550 PF07690 Major Facilitator Superfamily M0D43_02555 PF00356 Bacterial regulatory proteins, lacI family M0D43_02570 PF04102 SlyX M0D43_02575 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M0D43_02575 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M0D43_02575 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M0D43_02580 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M0D43_02580 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M0D43_02585 PF00255 Glutathione peroxidase M0D43_02595 PF00392 Bacterial regulatory proteins, gntR family M0D43_02600 PF00005 ABC transporter M0D43_02630 PF00206 Lyase M0D43_02630 PF10415 Fumarase C C-terminus M0D43_02635 PF00571 CBS domain M0D43_02635 PF01595 Cyclin M transmembrane N-terminal domain M0D43_02635 PF03471 Transporter associated domain M0D43_02645 PF00206 Lyase M0D43_02645 PF08328 Adenylosuccinate lyase C-terminal M0D43_02660 PF08007 Cupin superfamily protein M0D43_02670 PF16078 2-oxoglutarate dehydrogenase N-terminus M0D43_02670 PF02779 Transketolase, pyrimidine binding domain M0D43_02670 PF00676 Dehydrogenase E1 component M0D43_02670 PF16870 2-oxoglutarate dehydrogenase C-terminal M0D43_02675 PF02817 e3 binding domain M0D43_02675 PF00364 Biotin-requiring enzyme M0D43_02675 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M0D43_02680 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M0D43_02680 PF07992 Pyridine nucleotide-disulphide oxidoreductase M0D43_02690 PF03641 Possible lysine decarboxylase M0D43_02695 PF01205 Uncharacterized protein family UPF0029 M0D43_02700 PF00005 ABC transporter M0D43_02700 PF00664 ABC transporter transmembrane region M0D43_02710 PF03466 LysR substrate binding domain M0D43_02710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D43_02715 PF00664 ABC transporter transmembrane region M0D43_02715 PF00005 ABC transporter M0D43_02715 PF03412 Peptidase C39 family M0D43_02740 PF08543 Phosphomethylpyrimidine kinase M0D43_02750 PF00226 DnaJ domain M0D43_02750 PF01556 DnaJ C terminal domain M0D43_02750 PF00684 DnaJ central domain M0D43_02755 PF00012 Hsp70 protein M0D43_02760 PF01025 GrpE M0D43_02765 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding M0D43_02765 PF01628 HrcA protein C terminal domain M0D43_02770 PF02463 RecF/RecN/SMC N terminal domain M0D43_02775 PF01475 Ferric uptake regulator family M0D43_02780 PF04355 SmpA / OmlA family M0D43_02785 PF03658 RnfH family Ubiquitin M0D43_02790 PF03364 Polyketide cyclase / dehydrase and lipid transport M0D43_02795 PF01668 SmpB protein M0D43_02800 PF00082 Subtilase family M0D43_02810 PF00589 Phage integrase family M0D43_02810 PF13356 Arm DNA-binding domain M0D43_02890 PF06791 Prophage tail length tape measure protein M0D43_03060 PF00772 DnaB-like helicase N terminal domain M0D43_03060 PF03796 DnaB-like helicase C terminal domain M0D43_03240 PF02794 RTX toxin acyltransferase family M0D43_03245 PF07690 Major Facilitator Superfamily M0D43_03260 PF00664 ABC transporter transmembrane region M0D43_03260 PF00005 ABC transporter M0D43_03260 PF03412 Peptidase C39 family M0D43_03280 PF02534 Type IV secretory system Conjugative DNA transfer M0D43_03380 PF04002 RadC-like JAB domain M0D43_03455 PF00990 Diguanylate cyclase, GGDEF domain M0D43_03465 PF00990 Diguanylate cyclase, GGDEF domain M0D43_03470 PF02321 Outer membrane efflux protein M0D43_03475 PF00106 short chain dehydrogenase M0D43_03480 PF00873 AcrB/AcrD/AcrF family M0D43_03485 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M0D43_03485 PF00529 HlyD membrane-fusion protein of T1SS M0D43_03500 PF03466 LysR substrate binding domain M0D43_03500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D43_03505 PF05736 OprF membrane domain M0D43_03505 PF00691 OmpA family M0D43_03510 PF03441 FAD binding domain of DNA photolyase M0D43_03510 PF00875 DNA photolyase M0D43_03515 PF03796 DnaB-like helicase C terminal domain M0D43_03515 PF00772 DnaB-like helicase N terminal domain M0D43_03520 PF03358 NADPH-dependent FMN reductase M0D43_03525 PF13537 Glutamine amidotransferase domain M0D43_03525 PF00733 Asparagine synthase M0D43_03535 PF02798 Glutathione S-transferase, N-terminal domain M0D43_03535 PF00043 Glutathione S-transferase, C-terminal domain M0D43_03545 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M0D43_03545 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M0D43_03545 PF02770 Acyl-CoA dehydrogenase, middle domain M0D43_03560 PF01026 TatD related DNase M0D43_03565 PF00899 ThiF family M0D43_03580 PF00313 'Cold-shock' DNA-binding domain M0D43_03605 PF13291 ACT domain M0D43_03605 PF00291 Pyridoxal-phosphate dependent enzyme M0D43_03625 PF05598 Transposase domain (DUF772) M0D43_03635 PF02253 Phospholipase A1 M0D43_03645 PF05683 Fumarase C-terminus M0D43_03645 PF05681 Fumarate hydratase (Fumerase) M0D43_03650 PF00005 ABC transporter M0D43_03655 PF00175 Oxidoreductase NAD-binding domain M0D43_03655 PF00970 Oxidoreductase FAD-binding domain M0D43_03660 PF00255 Glutathione peroxidase M0D43_03665 PF01432 Peptidase family M3 M0D43_03675 PF00082 Subtilase family M0D43_03680 PF04542 Sigma-70 region 2 M0D43_03680 PF08281 Sigma-70, region 4 M0D43_03715 PF00854 POT family M0D43_03725 PF14310 Fibronectin type III-like domain M0D43_03725 PF00933 Glycosyl hydrolase family 3 N terminal domain M0D43_03725 PF01915 Glycosyl hydrolase family 3 C-terminal domain M0D43_03740 PF00144 Beta-lactamase M0D43_03745 PF07690 Major Facilitator Superfamily M0D43_03750 PF00529 HlyD membrane-fusion protein of T1SS M0D43_03750 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M0D43_03755 PF02321 Outer membrane efflux protein M0D43_03770 PF03989 DNA gyrase C-terminal domain, beta-propeller M0D43_03770 PF00521 DNA gyrase/topoisomerase IV, subunit A M0D43_03775 PF05724 Thiopurine S-methyltransferase (TPMT) M0D43_03780 PF00210 Ferritin-like domain M0D43_03785 PF01804 Penicillin amidase M0D43_03795 PF00106 short chain dehydrogenase M0D43_03800 PF00593 TonB dependent receptor M0D43_03800 PF07715 TonB-dependent Receptor Plug Domain M0D43_03810 PF00733 Asparagine synthase M0D43_03810 PF13537 Glutamine amidotransferase domain M0D43_03815 PF07687 Peptidase dimerisation domain M0D43_03815 PF01546 Peptidase family M20/M25/M40 M0D43_03825 PF03960 ArsC family M0D43_03835 PF00132 Bacterial transferase hexapeptide (six repeats) M0D43_03835 PF14602 Hexapeptide repeat of succinyl-transferase M0D43_03835 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal M0D43_03840 PF01909 Nucleotidyltransferase domain M0D43_03840 PF01966 HD domain M0D43_03840 PF08335 GlnD PII-uridylyltransferase M0D43_03845 PF00557 Metallopeptidase family M24 M0D43_03880 PF00318 Ribosomal protein S2 M0D43_03885 PF00889 Elongation factor TS M0D43_03890 PF00072 Response regulator receiver domain M0D43_03890 PF00990 Diguanylate cyclase, GGDEF domain M0D43_03895 PF00696 Amino acid kinase family M0D43_03900 PF01765 Ribosome recycling factor M0D43_03905 PF01255 Putative undecaprenyl diphosphate synthase M0D43_03915 PF13288 DXP reductoisomerase C-terminal domain M0D43_03915 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase M0D43_03915 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain M0D43_03920 PF17820 PDZ domain M0D43_03920 PF02163 Peptidase family M50 M0D43_03925 PF07244 Surface antigen variable number repeat M0D43_03925 PF01103 Surface antigen M0D43_03935 PF00132 Bacterial transferase hexapeptide (six repeats) M0D43_03935 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD M0D43_03940 PF07977 FabA-like domain M0D43_03945 PF00132 Bacterial transferase hexapeptide (six repeats) M0D43_03945 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 M0D43_03950 PF02684 Lipid-A-disaccharide synthetase M0D43_03955 PF01351 Ribonuclease HII M0D43_03960 PF07733 Bacterial DNA polymerase III alpha NTPase domain M0D43_03960 PF01336 OB-fold nucleic acid binding domain M0D43_03960 PF02811 PHP domain M0D43_03960 PF14579 Helix-hairpin-helix motif M0D43_03960 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M0D43_03965 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit M0D43_03990 PF03653 Uncharacterised protein family (UPF0093) M0D43_04010 PF03551 Transcriptional regulator PadR-like family M0D43_04030 PF02592 Putative vitamin uptake transporter M0D43_04045 PF01636 Phosphotransferase enzyme family M0D43_04050 PF02574 Homocysteine S-methyltransferase M0D43_04055 PF00324 Amino acid permease M0D43_04060 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M0D43_04065 PF00005 ABC transporter M0D43_04065 PF13732 Domain of unknown function (DUF4162) M0D43_04080 PF09334 tRNA synthetases class I (M) M0D43_04080 PF01588 Putative tRNA binding domain M0D43_04090 PF04060 Putative Fe-S cluster M0D43_04105 PF04542 Sigma-70 region 2 M0D43_04105 PF04545 Sigma-70, region 4 M0D43_04155 PF01042 Endoribonuclease L-PSP M0D43_04165 PF09924 Uncharacterised conserved protein (DUF2156) M0D43_04165 PF03706 Lysylphosphatidylglycerol synthase TM region M0D43_04200 PF07690 Major Facilitator Superfamily M0D43_04205 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M0D43_04210 PF08274 PhnA Zinc-Ribbon M0D43_04210 PF03831 PhnA domain M0D43_04220 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M0D43_04245 PF04542 Sigma-70 region 2 M0D43_04245 PF08281 Sigma-70, region 4 M0D43_04255 PF01258 Prokaryotic dksA/traR C4-type zinc finger M0D43_04265 PF07043 Protein of unknown function (DUF1328) M0D43_04270 PF01863 Protein of unknown function DUF45 M0D43_04285 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M0D43_04285 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M0D43_04290 PF12951 Passenger-associated-transport-repeat M0D43_04290 PF03797 Autotransporter beta-domain M0D43_04290 PF00082 Subtilase family M0D43_04295 PF02803 Thiolase, C-terminal domain M0D43_04295 PF00108 Thiolase, N-terminal domain M0D43_04310 PF00990 Diguanylate cyclase, GGDEF domain M0D43_04310 PF00072 Response regulator receiver domain M0D43_04325 PF04679 ATP dependent DNA ligase C terminal region M0D43_04325 PF01068 ATP dependent DNA ligase domain M0D43_04325 PF04675 DNA ligase N terminus M0D43_04335 PF04675 DNA ligase N terminus M0D43_04335 PF04679 ATP dependent DNA ligase C terminal region M0D43_04335 PF01068 ATP dependent DNA ligase domain M0D43_04340 PF08494 DEAD/H associated M0D43_04340 PF00270 DEAD/DEAH box helicase M0D43_04340 PF00271 Helicase conserved C-terminal domain M0D43_04350 PF01494 FAD binding domain M0D43_04355 PF01494 FAD binding domain M0D43_04360 PF00313 'Cold-shock' DNA-binding domain M0D43_04365 PF01048 Phosphorylase superfamily M0D43_04370 PF00156 Phosphoribosyl transferase domain M0D43_04375 PF00933 Glycosyl hydrolase family 3 N terminal domain M0D43_04380 PF04244 Deoxyribodipyrimidine photo-lyase-related protein M0D43_04385 PF01593 Flavin containing amine oxidoreductase M0D43_04390 PF01323 DSBA-like thioredoxin domain M0D43_04395 PF01928 CYTH domain M0D43_04400 PF05958 tRNA (Uracil-5-)-methyltransferase M0D43_04410 PF11967 Recombination protein O N terminal M0D43_04410 PF02565 Recombination protein O C terminal M0D43_04415 PF07650 KH domain M0D43_04415 PF01926 50S ribosome-binding GTPase M0D43_04420 PF14622 Ribonuclease-III-like M0D43_04420 PF00035 Double-stranded RNA binding motif M0D43_04430 PF10502 Signal peptidase, peptidase S26 M0D43_04435 PF00679 Elongation factor G C-terminus M0D43_04435 PF00009 Elongation factor Tu GTP binding domain M0D43_04435 PF03144 Elongation factor Tu domain 2 M0D43_04435 PF06421 GTP-binding protein LepA C-terminus M0D43_04440 PF13180 PDZ domain M0D43_04450 PF04542 Sigma-70 region 2 M0D43_04450 PF08281 Sigma-70, region 4 M0D43_04455 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M0D43_04455 PF00378 Enoyl-CoA hydratase/isomerase M0D43_04455 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M0D43_04460 PF01545 Cation efflux family M0D43_04470 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M0D43_04470 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M0D43_04475 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M0D43_04475 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M0D43_04475 PF00378 Enoyl-CoA hydratase/isomerase M0D43_04480 PF00378 Enoyl-CoA hydratase/isomerase M0D43_04485 PF02770 Acyl-CoA dehydrogenase, middle domain M0D43_04485 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M0D43_04485 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M0D43_04490 PF00171 Aldehyde dehydrogenase family M0D43_04495 PF01381 Helix-turn-helix M0D43_04495 PF09856 Predicted transcriptional regulator (DUF2083) M0D43_04495 PF06114 IrrE N-terminal-like domain M0D43_04505 PF07745 Glycosyl hydrolase family 53 M0D43_04510 PF16355 Domain of unknown function (DUF4982) M0D43_04510 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 M0D43_04510 PF00703 Glycosyl hydrolases family 2 M0D43_04510 PF02837 Glycosyl hydrolases family 2, sugar binding domain M0D43_04510 PF02836 Glycosyl hydrolases family 2, TIM barrel domain M0D43_04525 PF00488 MutS domain V M0D43_04525 PF01624 MutS domain I M0D43_04525 PF05188 MutS domain II M0D43_04525 PF05192 MutS domain III M0D43_04525 PF05190 MutS family domain IV M0D43_04530 PF00005 ABC transporter M0D43_04535 PF00950 ABC 3 transport family M0D43_04540 PF01297 Zinc-uptake complex component A periplasmic M0D43_04545 PF02492 CobW/HypB/UreG, nucleotide-binding domain M0D43_04545 PF07683 Cobalamin synthesis protein cobW C-terminal domain M0D43_04555 PF07715 TonB-dependent Receptor Plug Domain M0D43_04555 PF00593 TonB dependent receptor M0D43_04575 PF00141 Peroxidase M0D43_04580 PF01479 S4 domain M0D43_04585 PF01554 MatE M0D43_04590 PF01245 Ribosomal protein L19 M0D43_04595 PF01746 tRNA (Guanine-1)-methyltransferase M0D43_04600 PF05239 PRC-barrel domain M0D43_04600 PF01782 RimM N-terminal domain M0D43_04605 PF00886 Ribosomal protein S16 M0D43_04615 PF03060 Nitronate monooxygenase M0D43_04620 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) M0D43_04625 PF00448 SRP54-type protein, GTPase domain M0D43_04625 PF02881 SRP54-type protein, helical bundle domain M0D43_04625 PF02978 Signal peptide binding domain M0D43_04630 PF01578 Cytochrome C assembly protein M0D43_04635 PF01263 Aldose 1-epimerase M0D43_04640 PF06964 Alpha-L-arabinofuranosidase C-terminal domain M0D43_04645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D43_04645 PF03466 LysR substrate binding domain M0D43_04660 PF00072 Response regulator receiver domain M0D43_04665 PF00072 Response regulator receiver domain M0D43_04665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_04665 PF13426 PAS domain M0D43_04670 PF01627 Hpt domain M0D43_04670 PF00512 His Kinase A (phospho-acceptor) domain M0D43_04670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_04670 PF00072 Response regulator receiver domain M0D43_04670 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M0D43_04670 PF00672 HAMP domain M0D43_04675 PF01739 CheR methyltransferase, SAM binding domain M0D43_04675 PF03705 CheR methyltransferase, all-alpha domain M0D43_04680 PF01339 CheB methylesterase M0D43_04685 PF00072 Response regulator receiver domain M0D43_04685 PF00990 Diguanylate cyclase, GGDEF domain M0D43_04690 PF07237 Protein of unknown function (DUF1428) M0D43_04695 PF00085 Thioredoxin M0D43_04700 PF00593 TonB dependent receptor M0D43_04700 PF07715 TonB-dependent Receptor Plug Domain M0D43_04705 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain M0D43_04705 PF04616 Glycosyl hydrolases family 43 M0D43_04710 PF13188 PAS domain M0D43_04710 PF08448 PAS fold M0D43_04710 PF00512 His Kinase A (phospho-acceptor) domain M0D43_04710 PF00072 Response regulator receiver domain M0D43_04710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_04715 PF00672 HAMP domain M0D43_04715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_04715 PF00512 His Kinase A (phospho-acceptor) domain M0D43_04715 PF01627 Hpt domain M0D43_04715 PF00072 Response regulator receiver domain M0D43_04715 PF17149 Periplasmic sensor domain found in signal transduction proteins M0D43_04725 PF13581 Histidine kinase-like ATPase domain M0D43_04730 PF01740 STAS domain M0D43_04735 PF08678 Rsbr N terminal M0D43_04735 PF01740 STAS domain M0D43_04745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_04745 PF00183 Hsp90 protein M0D43_04750 PF12833 Helix-turn-helix domain M0D43_04760 PF05656 Protein of unknown function (DUF805) M0D43_04765 PF18073 Rubredoxin metal binding domain M0D43_04770 PF00155 Aminotransferase class I and II M0D43_04780 PF03626 Prokaryotic Cytochrome C oxidase subunit IV M0D43_04785 PF00510 Cytochrome c oxidase subunit III M0D43_04790 PF00115 Cytochrome C and Quinol oxidase polypeptide I M0D43_04795 PF06481 COX Aromatic Rich Motif M0D43_04795 PF00116 Cytochrome C oxidase subunit II, periplasmic domain M0D43_04805 PF02401 LytB protein M0D43_04810 PF01252 Signal peptidase (SPase) II M0D43_04815 PF08264 Anticodon-binding domain of tRNA M0D43_04815 PF00133 tRNA synthetases class I (I, L, M and V) M0D43_04815 PF06827 Zinc finger found in FPG and IleRS M0D43_04825 PF03023 Lipid II flippase MurJ M0D43_04830 PF01649 Ribosomal protein S20 M0D43_04840 PF01016 Ribosomal L27 protein M0D43_04845 PF00829 Ribosomal prokaryotic L21 protein M0D43_04850 PF00005 ABC transporter M0D43_04850 PF17755 UvrA DNA-binding domain M0D43_04850 PF17760 UvrA interaction domain M0D43_04865 PF00378 Enoyl-CoA hydratase/isomerase M0D43_04880 PF08281 Sigma-70, region 4 M0D43_04880 PF04542 Sigma-70 region 2 M0D43_04895 PF04377 Arginine-tRNA-protein transferase, C terminus M0D43_04895 PF04376 Arginine-tRNA-protein transferase, N terminus M0D43_04915 PF02222 ATP-grasp domain M0D43_04940 PF13026 Protein of unknown function (DUF3887) M0D43_04940 PF12146 Serine aminopeptidase, S33 M0D43_04960 PF00730 HhH-GPD superfamily base excision DNA repair protein M0D43_04975 PF00072 Response regulator receiver domain M0D43_04975 PF00196 Bacterial regulatory proteins, luxR family M0D43_04980 PF07730 Histidine kinase M0D43_04990 PF05209 Septum formation inhibitor MinC, N-terminal domain M0D43_04990 PF03775 Septum formation inhibitor MinC, C-terminal domain M0D43_04995 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain M0D43_05000 PF03776 Septum formation topological specificity factor MinE M0D43_05010 PF00512 His Kinase A (phospho-acceptor) domain M0D43_05010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_05010 PF08521 Two-component sensor kinase N-terminal M0D43_05015 PF00072 Response regulator receiver domain M0D43_05015 PF00486 Transcriptional regulatory protein, C terminal M0D43_05020 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase M0D43_05030 PF08019 Phosphoethanolamine transferase EptA/EptB M0D43_05030 PF00884 Sulfatase M0D43_05045 PF07690 Major Facilitator Superfamily M0D43_05050 PF00664 ABC transporter transmembrane region M0D43_05050 PF00005 ABC transporter M0D43_05050 PF03412 Peptidase C39 family M0D43_05070 PF02347 Glycine cleavage system P-protein M0D43_05075 PF00135 Carboxylesterase family M0D43_05080 PF00248 Aldo/keto reductase family M0D43_05085 PF06628 Catalase-related immune-responsive M0D43_05085 PF18011 C-terminal domain found in long catalases M0D43_05085 PF00199 Catalase M0D43_05110 PF02311 AraC-like ligand binding domain M0D43_05110 PF12833 Helix-turn-helix domain M0D43_05120 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region M0D43_05120 PF07676 WD40-like Beta Propeller Repeat M0D43_05120 PF00326 Prolyl oligopeptidase family M0D43_05130 PF03169 OPT oligopeptide transporter protein M0D43_05155 PF14579 Helix-hairpin-helix motif M0D43_05155 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M0D43_05155 PF02811 PHP domain M0D43_05155 PF07733 Bacterial DNA polymerase III alpha NTPase domain M0D43_05170 PF01726 LexA DNA binding domain M0D43_05170 PF00717 Peptidase S24-like M0D43_05205 PF01799 [2Fe-2S] binding domain M0D43_05205 PF00111 2Fe-2S iron-sulfur cluster binding domain M0D43_05210 PF00941 FAD binding domain in molybdopterin dehydrogenase M0D43_05210 PF03450 CO dehydrogenase flavoprotein C-terminal domain M0D43_05215 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain M0D43_05215 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase M0D43_05225 PF08240 Alcohol dehydrogenase GroES-like domain M0D43_05225 PF00107 Zinc-binding dehydrogenase M0D43_05230 PF17755 UvrA DNA-binding domain M0D43_05250 PF07992 Pyridine nucleotide-disulphide oxidoreductase M0D43_05260 PF07971 Glycosyl hydrolase family 92 M0D43_05260 PF17678 Glycosyl hydrolase family 92 N-terminal domain M0D43_05285 PF13456 Reverse transcriptase-like M0D43_05285 PF00300 Histidine phosphatase superfamily (branch 1) M0D43_05310 PF08463 EcoEI R protein C-terminal M0D43_05310 PF00271 Helicase conserved C-terminal domain M0D43_05310 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) M0D43_05310 PF04851 Type III restriction enzyme, res subunit M0D43_05315 PF02661 Fic/DOC family M0D43_05320 PF02384 N-6 DNA Methylase M0D43_05325 PF01420 Type I restriction modification DNA specificity domain M0D43_05340 PF00440 Bacterial regulatory proteins, tetR family M0D43_05360 PF11838 ERAP1-like C-terminal domain M0D43_05360 PF01433 Peptidase family M1 domain M0D43_05365 PF00709 Adenylosuccinate synthetase M0D43_05380 PF01145 SPFH domain / Band 7 family M0D43_05385 PF01145 SPFH domain / Band 7 family M0D43_05385 PF12221 Bacterial membrane protein N terminal M0D43_05390 PF00072 Response regulator receiver domain M0D43_05395 PF00226 DnaJ domain M0D43_05395 PF01556 DnaJ C terminal domain M0D43_05405 PF08534 Redoxin M0D43_05415 PF06832 Penicillin-Binding Protein C-terminus Family M0D43_05415 PF00912 Transglycosylase M0D43_05415 PF00905 Penicillin binding protein transpeptidase domain M0D43_05430 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain M0D43_05430 PF00207 Alpha-2-macroglobulin family M0D43_05430 PF07703 Alpha-2-macroglobulin bait region domain M0D43_05430 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain M0D43_05430 PF11974 Bacterial alpha-2-macroglobulin MG3 domain M0D43_05430 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain M0D43_05430 PF17962 Bacterial macroglobulin domain 6 M0D43_05430 PF01835 MG2 domain M0D43_05440 PF07715 TonB-dependent Receptor Plug Domain M0D43_05440 PF00593 TonB dependent receptor M0D43_05445 PF04303 PrpF protein M0D43_05455 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH M0D43_05460 PF00330 Aconitase family (aconitate hydratase) M0D43_05460 PF00694 Aconitase C-terminal domain M0D43_05465 PF00285 Citrate synthase, C-terminal domain M0D43_05475 PF02954 Bacterial regulatory protein, Fis family M0D43_05475 PF06506 Propionate catabolism activator M0D43_05475 PF00158 Sigma-54 interaction domain M0D43_05495 PF09115 DNA polymerase III, delta subunit, C terminal M0D43_05500 PF02618 YceG-like family M0D43_05505 PF04715 Anthranilate synthase component I, N terminal region M0D43_05505 PF00425 chorismate binding enzyme M0D43_05510 PF00109 Beta-ketoacyl synthase, N-terminal domain M0D43_05510 PF02801 Beta-ketoacyl synthase, C-terminal domain M0D43_05515 PF00550 Phosphopantetheine attachment site M0D43_05525 PF00698 Acyl transferase domain M0D43_05535 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M0D43_05535 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M0D43_05540 PF01783 Ribosomal L32p protein family M0D43_05545 PF02620 Large ribosomal RNA subunit accumulation protein YceD M0D43_05550 PF02545 Maf-like protein M0D43_05565 PF07726 ATPase family associated with various cellular activities (AAA) M0D43_05565 PF17863 AAA lid domain M0D43_05575 PF11992 Domain of unknown function (DUF3488) M0D43_05575 PF13559 Domain of unknown function (DUF4129) M0D43_05575 PF01841 Transglutaminase-like superfamily M0D43_05585 PF01230 HIT domain M0D43_05590 PF02132 RecR protein M0D43_05590 PF13662 Toprim domain M0D43_05595 PF02575 YbaB/EbfC DNA-binding family M0D43_05600 PF12170 DNA polymerase III tau subunit V interacting with alpha M0D43_05600 PF12169 DNA polymerase III subunits gamma and tau domain III M0D43_05600 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding M0D43_05655 PF02391 MoaE protein M0D43_05660 PF02597 ThiS family M0D43_05665 PF01967 MoaC family M0D43_05675 PF04055 Radical SAM superfamily M0D43_05675 PF06463 Molybdenum Cofactor Synthesis C M0D43_05690 PF01075 Glycosyltransferase family 9 (heptosyltransferase) M0D43_05715 PF00929 Exonuclease M0D43_05720 PF00075 RNase H M0D43_05730 PF00753 Metallo-beta-lactamase superfamily M0D43_05730 PF16123 Hydroxyacylglutathione hydrolase C-terminus M0D43_05735 PF05257 CHAP domain M0D43_05735 PF01476 LysM domain M0D43_05760 PF00216 Bacterial DNA-binding protein M0D43_05765 PF00004 ATPase family associated with various cellular activities (AAA) M0D43_05765 PF05362 Lon protease (S16) C-terminal proteolytic domain M0D43_05765 PF02190 ATP-dependent protease La (LON) substrate-binding domain M0D43_05770 PF07724 AAA domain (Cdc48 subfamily) M0D43_05770 PF06689 ClpX C4-type zinc finger M0D43_05770 PF10431 C-terminal, D2-small domain, of ClpB protein M0D43_05775 PF00574 Clp protease M0D43_05780 PF05698 Bacterial trigger factor protein (TF) C-terminus M0D43_05780 PF05697 Bacterial trigger factor protein (TF) M0D43_05790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_05790 PF13426 PAS domain M0D43_05790 PF00072 Response regulator receiver domain M0D43_05825 PF18324 Hypothetical protein TT1725 M0D43_05825 PF00180 Isocitrate/isopropylmalate dehydrogenase M0D43_05835 PF00462 Glutaredoxin M0D43_05840 PF13181 Tetratricopeptide repeat M0D43_05840 PF01435 Peptidase family M48 M0D43_05845 PF00072 Response regulator receiver domain M0D43_05845 PF00486 Transcriptional regulatory protein, C terminal M0D43_05850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_05850 PF00512 His Kinase A (phospho-acceptor) domain M0D43_05850 PF00989 PAS fold M0D43_05850 PF11808 Phosphate regulon sensor protein PhoR M0D43_05855 PF02503 Polyphosphate kinase middle domain M0D43_05855 PF13090 Polyphosphate kinase C-terminal domain 2 M0D43_05855 PF13089 Polyphosphate kinase N-terminal domain M0D43_05855 PF17941 Polyphosphate kinase C-terminal domain 1 M0D43_05860 PF02541 Ppx/GppA phosphatase family M0D43_05865 PF13439 Glycosyltransferase Family 4 M0D43_05865 PF00534 Glycosyl transferases group 1 M0D43_05870 PF01569 PAP2 superfamily M0D43_05875 PF00149 Calcineurin-like phosphoesterase M0D43_05890 PF04305 Protein of unknown function (DUF455) M0D43_05900 PF00156 Phosphoribosyl transferase domain M0D43_05915 PF02875 Mur ligase family, glutamate ligase domain M0D43_05915 PF08245 Mur ligase middle domain M0D43_05930 PF00300 Histidine phosphatase superfamily (branch 1) M0D43_05935 PF10459 Peptidase S46 M0D43_05940 PF04185 Phosphoesterase family M0D43_05940 PF05506 Domain of unknown function (DUF756) M0D43_05950 PF08240 Alcohol dehydrogenase GroES-like domain M0D43_05950 PF00107 Zinc-binding dehydrogenase M0D43_05960 PF00005 ABC transporter M0D43_05960 PF17850 CysA C-terminal regulatory domain M0D43_05960 PF12857 TOBE-like domain M0D43_05965 PF00528 Binding-protein-dependent transport system inner membrane component M0D43_05970 PF00528 Binding-protein-dependent transport system inner membrane component M0D43_05980 PF00155 Aminotransferase class I and II M0D43_05990 PF00849 RNA pseudouridylate synthase M0D43_06000 PF00691 OmpA family M0D43_06000 PF00223 Photosystem I psaA/psaB protein M0D43_06005 PF08240 Alcohol dehydrogenase GroES-like domain M0D43_06005 PF00107 Zinc-binding dehydrogenase M0D43_06010 PF07992 Pyridine nucleotide-disulphide oxidoreductase M0D43_06010 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M0D43_06025 PF00043 Glutathione S-transferase, C-terminal domain M0D43_06025 PF02798 Glutathione S-transferase, N-terminal domain M0D43_06030 PF00056 lactate/malate dehydrogenase, NAD binding domain M0D43_06030 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain M0D43_06035 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M0D43_06040 PF00679 Elongation factor G C-terminus M0D43_06040 PF03144 Elongation factor Tu domain 2 M0D43_06040 PF00009 Elongation factor Tu GTP binding domain M0D43_06050 PF01425 Amidase M0D43_06060 PF01474 Class-II DAHP synthetase family M0D43_06070 PF02600 Disulfide bond formation protein DsbB M0D43_06075 PF01196 Ribosomal protein L17 M0D43_06080 PF01000 RNA polymerase Rpb3/RpoA insert domain M0D43_06080 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain M0D43_06080 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain M0D43_06085 PF01479 S4 domain M0D43_06085 PF00163 Ribosomal protein S4/S9 N-terminal domain M0D43_06090 PF00411 Ribosomal protein S11 M0D43_06095 PF00416 Ribosomal protein S13/S18 M0D43_06100 PF00344 SecY translocase M0D43_06105 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A M0D43_06110 PF00327 Ribosomal protein L30p/L7e M0D43_06115 PF00333 Ribosomal protein S5, N-terminal domain M0D43_06115 PF03719 Ribosomal protein S5, C-terminal domain M0D43_06120 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast M0D43_06125 PF00347 Ribosomal protein L6 M0D43_06130 PF00410 Ribosomal protein S8 M0D43_06135 PF00253 Ribosomal protein S14p/S29e M0D43_06140 PF00281 Ribosomal protein L5 M0D43_06140 PF00673 ribosomal L5P family C-terminus M0D43_06145 PF00467 KOW motif M0D43_06145 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 M0D43_06150 PF00238 Ribosomal protein L14p/L23e M0D43_06155 PF00366 Ribosomal protein S17 M0D43_06160 PF00831 Ribosomal L29 protein M0D43_06165 PF00252 Ribosomal protein L16p/L10e M0D43_06170 PF00189 Ribosomal protein S3, C-terminal domain M0D43_06170 PF07650 KH domain M0D43_06175 PF00237 Ribosomal protein L22p/L17e M0D43_06180 PF00203 Ribosomal protein S19 M0D43_06185 PF03947 Ribosomal Proteins L2, C-terminal domain M0D43_06185 PF00181 Ribosomal Proteins L2, RNA binding domain M0D43_06190 PF00276 Ribosomal protein L23 M0D43_06195 PF00573 Ribosomal protein L4/L1 family M0D43_06200 PF00297 Ribosomal protein L3 M0D43_06205 PF00338 Ribosomal protein S10p/S20e M0D43_06220 PF03144 Elongation factor Tu domain 2 M0D43_06220 PF03143 Elongation factor Tu C-terminal domain M0D43_06220 PF00009 Elongation factor Tu GTP binding domain M0D43_06225 PF00009 Elongation factor Tu GTP binding domain M0D43_06225 PF03144 Elongation factor Tu domain 2 M0D43_06225 PF03764 Elongation factor G, domain IV M0D43_06225 PF14492 Elongation Factor G, domain II M0D43_06225 PF00679 Elongation factor G C-terminus M0D43_06230 PF00177 Ribosomal protein S7p/S5e M0D43_06235 PF00164 Ribosomal protein S12/S23 M0D43_06240 PF05000 RNA polymerase Rpb1, domain 4 M0D43_06240 PF04983 RNA polymerase Rpb1, domain 3 M0D43_06240 PF04997 RNA polymerase Rpb1, domain 1 M0D43_06240 PF00623 RNA polymerase Rpb1, domain 2 M0D43_06240 PF04998 RNA polymerase Rpb1, domain 5 M0D43_06245 PF04563 RNA polymerase beta subunit M0D43_06245 PF04565 RNA polymerase Rpb2, domain 3 M0D43_06245 PF04560 RNA polymerase Rpb2, domain 7 M0D43_06245 PF10385 RNA polymerase beta subunit external 1 domain M0D43_06245 PF00562 RNA polymerase Rpb2, domain 6 M0D43_06245 PF04561 RNA polymerase Rpb2, domain 2 M0D43_06255 PF00466 Ribosomal protein L10 M0D43_06260 PF00687 Ribosomal protein L1p/L10e family M0D43_06265 PF03946 Ribosomal protein L11, N-terminal domain M0D43_06265 PF00298 Ribosomal protein L11, RNA binding domain M0D43_06270 PF02357 Transcription termination factor nusG M0D43_06270 PF00467 KOW motif M0D43_06275 PF00584 SecE/Sec61-gamma subunits of protein translocation complex M0D43_06285 PF03143 Elongation factor Tu C-terminal domain M0D43_06285 PF00009 Elongation factor Tu GTP binding domain M0D43_06285 PF03144 Elongation factor Tu domain 2 M0D43_06305 PF01926 50S ribosome-binding GTPase M0D43_06305 PF06071 Protein of unknown function (DUF933) M0D43_06310 PF01195 Peptidyl-tRNA hydrolase M0D43_06315 PF14693 Ribosomal protein TL5, C-terminal domain M0D43_06315 PF01386 Ribosomal L25p family M0D43_06320 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M0D43_06320 PF14572 Phosphoribosyl synthetase-associated domain M0D43_06330 PF00288 GHMP kinases N terminal domain M0D43_06330 PF08544 GHMP kinases C terminal M0D43_06335 PF03550 Outer membrane lipoprotein LolB M0D43_06345 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain M0D43_06345 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain M0D43_06345 PF01488 Shikimate / quinate 5-dehydrogenase M0D43_06350 PF03462 PCRF domain M0D43_06350 PF00472 RF-1 domain M0D43_06360 PF00994 Probable molybdopterin binding domain M0D43_06365 PF03976 Polyphosphate kinase 2 (PPK2) M0D43_06375 PF00708 Acylphosphatase M0D43_06380 PF08534 Redoxin M0D43_06385 PF03631 Virulence factor BrkB M0D43_06390 PF03358 NADPH-dependent FMN reductase M0D43_06405 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain M0D43_06405 PF17189 Glycosyl hydrolase family 30 beta sandwich domain M0D43_06415 PF04073 Aminoacyl-tRNA editing domain M0D43_06420 PF04151 Bacterial pre-peptidase C-terminal domain M0D43_06420 PF00082 Subtilase family M0D43_06425 PF00082 Subtilase family M0D43_06425 PF04151 Bacterial pre-peptidase C-terminal domain M0D43_06430 PF00082 Subtilase family M0D43_06430 PF04151 Bacterial pre-peptidase C-terminal domain M0D43_06435 PF01063 Amino-transferase class IV M0D43_06450 PF02233 NAD(P) transhydrogenase beta subunit M0D43_06455 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch M0D43_06475 PF01262 Alanine dehydrogenase/PNT, C-terminal domain M0D43_06475 PF05222 Alanine dehydrogenase/PNT, N-terminal domain M0D43_06475 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch M0D43_06500 PF01612 3'-5' exonuclease M0D43_06500 PF00476 DNA polymerase family A M0D43_06500 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M0D43_06500 PF01367 5'-3' exonuclease, C-terminal SAM fold M0D43_06505 PF00293 NUDIX domain M0D43_06515 PF00561 alpha/beta hydrolase fold M0D43_06530 PF05175 Methyltransferase small domain M0D43_06530 PF17827 PrmC N-terminal domain M0D43_06535 PF00578 AhpC/TSA family M0D43_06535 PF10417 C-terminal domain of 1-Cys peroxiredoxin M0D43_06540 PF07992 Pyridine nucleotide-disulphide oxidoreductase M0D43_06540 PF13192 Thioredoxin domain M0D43_06545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D43_06545 PF03466 LysR substrate binding domain M0D43_06555 PF14760 Rnk N-terminus M0D43_06555 PF01272 Transcription elongation factor, GreA/GreB, C-term M0D43_06560 PF00923 Transaldolase/Fructose-6-phosphate aldolase M0D43_06570 PF01625 Peptide methionine sulfoxide reductase M0D43_06580 PF00196 Bacterial regulatory proteins, luxR family M0D43_06580 PF00072 Response regulator receiver domain M0D43_06585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_06585 PF00512 His Kinase A (phospho-acceptor) domain M0D43_06585 PF01627 Hpt domain M0D43_06585 PF00672 HAMP domain M0D43_06585 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M0D43_06585 PF00072 Response regulator receiver domain M0D43_06590 PF00072 Response regulator receiver domain M0D43_06590 PF00990 Diguanylate cyclase, GGDEF domain M0D43_06605 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain M0D43_06605 PF00749 tRNA synthetases class I (E and Q), catalytic domain M0D43_06610 PF00892 EamA-like transporter family M0D43_06625 PF18125 RlmM ferredoxin-like domain M0D43_06625 PF01728 FtsJ-like methyltransferase M0D43_06630 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M0D43_06630 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M0D43_06655 PF00378 Enoyl-CoA hydratase/isomerase M0D43_06660 PF00171 Aldehyde dehydrogenase family M0D43_06665 PF13193 AMP-binding enzyme C-terminal domain M0D43_06665 PF00501 AMP-binding enzyme M0D43_06670 PF03466 LysR substrate binding domain M0D43_06670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D43_06675 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit M0D43_06675 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase M0D43_06680 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase M0D43_06685 PF07729 FCD domain M0D43_06685 PF00392 Bacterial regulatory proteins, gntR family M0D43_06700 PF12697 Alpha/beta hydrolase family M0D43_06705 PF01494 FAD binding domain M0D43_06710 PF01494 FAD binding domain M0D43_06725 PF01923 Cobalamin adenosyltransferase M0D43_06730 PF00850 Histone deacetylase domain M0D43_06735 PF04453 LPS transport system D M0D43_06735 PF03968 OstA-like protein M0D43_06740 PF00639 PPIC-type PPIASE domain M0D43_06740 PF09312 SurA N-terminal domain M0D43_06745 PF04166 Pyridoxal phosphate biosynthetic protein PdxA M0D43_06750 PF00398 Ribosomal RNA adenine dimethylase M0D43_06755 PF04379 ApaG domain M0D43_06760 PF00149 Calcineurin-like phosphoesterase M0D43_06765 PF00186 Dihydrofolate reductase M0D43_06775 PF00303 Thymidylate synthase M0D43_06780 PF01790 Prolipoprotein diacylglyceryl transferase M0D43_06800 PF01219 Prokaryotic diacylglycerol kinase M0D43_06810 PF08521 Two-component sensor kinase N-terminal M0D43_06810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_06810 PF00512 His Kinase A (phospho-acceptor) domain M0D43_06815 PF00486 Transcriptional regulatory protein, C terminal M0D43_06815 PF00072 Response regulator receiver domain M0D43_06820 PF13472 GDSL-like Lipase/Acylhydrolase family M0D43_06825 PF00005 ABC transporter M0D43_06835 PF02668 Taurine catabolism dioxygenase TauD, TfdA family M0D43_06845 PF00005 ABC transporter M0D43_06850 PF00528 Binding-protein-dependent transport system inner membrane component M0D43_06870 PF07715 TonB-dependent Receptor Plug Domain M0D43_06870 PF00593 TonB dependent receptor M0D43_06880 PF00248 Aldo/keto reductase family M0D43_06890 PF07662 Na+ dependent nucleoside transporter C-terminus M0D43_06890 PF01773 Na+ dependent nucleoside transporter N-terminus M0D43_06890 PF07670 Nucleoside recognition M0D43_06895 PF00294 pfkB family carbohydrate kinase M0D43_06910 PF01207 Dihydrouridine synthase (Dus) M0D43_06915 PF13649 Methyltransferase domain M0D43_06925 PF02773 S-adenosylmethionine synthetase, C-terminal domain M0D43_06925 PF02772 S-adenosylmethionine synthetase, central domain M0D43_06925 PF00438 S-adenosylmethionine synthetase, N-terminal domain M0D43_06930 PF00328 Histidine phosphatase superfamily (branch 2) M0D43_06965 PF00311 Phosphoenolpyruvate carboxylase M0D43_06975 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain M0D43_06975 PF05221 S-adenosyl-L-homocysteine hydrolase M0D43_06980 PF13649 Methyltransferase domain M0D43_06990 PF00685 Sulfotransferase domain M0D43_07020 PF00128 Alpha amylase, catalytic domain M0D43_07025 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M0D43_07035 PF09286 Pro-kumamolisin, activation domain M0D43_07035 PF00082 Subtilase family M0D43_07040 PF00550 Phosphopantetheine attachment site M0D43_07040 PF08659 KR domain M0D43_07040 PF14765 Polyketide synthase dehydratase M0D43_07040 PF02801 Beta-ketoacyl synthase, C-terminal domain M0D43_07040 PF00698 Acyl transferase domain M0D43_07040 PF16197 Ketoacyl-synthetase C-terminal extension M0D43_07040 PF00107 Zinc-binding dehydrogenase M0D43_07040 PF08240 Alcohol dehydrogenase GroES-like domain M0D43_07040 PF00109 Beta-ketoacyl synthase, N-terminal domain M0D43_07050 PF02219 Methylenetetrahydrofolate reductase M0D43_07060 PF00293 NUDIX domain M0D43_07070 PF07517 SecA DEAD-like domain M0D43_07070 PF01043 SecA preprotein cross-linking domain M0D43_07070 PF07516 SecA Wing and Scaffold domain M0D43_07070 PF02810 SEC-C motif M0D43_07075 PF01476 LysM domain M0D43_07075 PF08525 Opacity-associated protein A N-terminal motif M0D43_07075 PF01551 Peptidase family M23 M0D43_07085 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase M0D43_07090 PF00091 Tubulin/FtsZ family, GTPase domain M0D43_07090 PF12327 FtsZ family, C-terminal domain M0D43_07095 PF02491 SHS2 domain inserted in FTSA M0D43_07100 PF08478 POTRA domain, FtsQ-type M0D43_07100 PF03799 Cell division protein FtsQ M0D43_07105 PF01820 D-ala D-ala ligase N-terminus M0D43_07105 PF07478 D-ala D-ala ligase C-terminus M0D43_07110 PF01225 Mur ligase family, catalytic domain M0D43_07110 PF08245 Mur ligase middle domain M0D43_07110 PF02875 Mur ligase family, glutamate ligase domain M0D43_07115 PF03033 Glycosyltransferase family 28 N-terminal domain M0D43_07115 PF04101 Glycosyltransferase family 28 C-terminal domain M0D43_07120 PF01098 Cell cycle protein M0D43_07125 PF00953 Glycosyl transferase family 4 M0D43_07130 PF08245 Mur ligase middle domain M0D43_07130 PF01225 Mur ligase family, catalytic domain M0D43_07130 PF02875 Mur ligase family, glutamate ligase domain M0D43_07135 PF08245 Mur ligase middle domain M0D43_07135 PF02875 Mur ligase family, glutamate ligase domain M0D43_07135 PF01225 Mur ligase family, catalytic domain M0D43_07140 PF03717 Penicillin-binding Protein dimerisation domain M0D43_07140 PF00905 Penicillin binding protein transpeptidase domain M0D43_07145 PF04999 Cell division protein FtsL M0D43_07150 PF01795 MraW methylase family M0D43_07155 PF02381 MraZ protein, putative antitoxin-like M0D43_07180 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M0D43_07190 PF02021 Uncharacterised protein family UPF0102 M0D43_07195 PF04307 LexA-binding, inner membrane-associated putative hydrolase M0D43_07200 PF02913 FAD linked oxidases, C-terminal domain M0D43_07200 PF01565 FAD binding domain M0D43_07215 PF00072 Response regulator receiver domain M0D43_07215 PF00486 Transcriptional regulatory protein, C terminal M0D43_07220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_07220 PF13492 GAF domain M0D43_07220 PF13493 Domain of unknown function (DUF4118) M0D43_07220 PF00512 His Kinase A (phospho-acceptor) domain M0D43_07220 PF02702 Osmosensitive K+ channel His kinase sensor domain M0D43_07225 PF02669 K+-transporting ATPase, c chain M0D43_07235 PF03814 Potassium-transporting ATPase A subunit M0D43_07255 PF02769 AIR synthase related protein, C-terminal domain M0D43_07255 PF00586 AIR synthase related protein, N-terminal domain M0D43_07260 PF01029 NusB family M0D43_07265 PF00885 6,7-dimethyl-8-ribityllumazine synthase M0D43_07270 PF00925 GTP cyclohydrolase II M0D43_07270 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M0D43_07275 PF00677 Lumazine binding domain M0D43_07285 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M0D43_07285 PF01872 RibD C-terminal domain M0D43_07295 PF03477 ATP cone domain M0D43_07300 PF00464 Serine hydroxymethyltransferase M0D43_07315 PF12848 ABC transporter M0D43_07315 PF00005 ABC transporter M0D43_07320 PF01327 Polypeptide deformylase M0D43_07330 PF03960 ArsC family M0D43_07345 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family M0D43_07345 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain M0D43_07380 PF00593 TonB dependent receptor M0D43_07380 PF07715 TonB-dependent Receptor Plug Domain M0D43_07390 PF07702 UTRA domain M0D43_07390 PF00392 Bacterial regulatory proteins, gntR family M0D43_07400 PF03958 Bacterial type II/III secretion system short domain M0D43_07400 PF00263 Bacterial type II and III secretion system protein M0D43_07410 PF10741 Type II secretion system (T2SS), protein M subtype b M0D43_07415 PF05137 Fimbrial assembly protein (PilN) M0D43_07420 PF03934 Type II secretion system (T2SS), protein K M0D43_07430 PF07963 Prokaryotic N-terminal methylation motif M0D43_07435 PF12019 Type II transport protein GspH M0D43_07440 PF08334 Type II secretion system (T2SS), protein G M0D43_07445 PF00482 Type II secretion system (T2SS), protein F M0D43_07450 PF00437 Type II/IV secretion system protein M0D43_07450 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M0D43_07455 PF00082 Subtilase family M0D43_07455 PF04151 Bacterial pre-peptidase C-terminal domain M0D43_07460 PF13018 Extended Signal Peptide of Type V secretion system M0D43_07460 PF03895 YadA-like membrane anchor domain M0D43_07460 PF05658 Head domain of trimeric autotransporter adhesin M0D43_07460 PF05662 Coiled stalk of trimeric autotransporter adhesin M0D43_07470 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal M0D43_07470 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain M0D43_07470 PF02769 AIR synthase related protein, C-terminal domain M0D43_07475 PF10411 Disulfide bond isomerase protein N-terminus M0D43_07475 PF13098 Thioredoxin-like domain M0D43_07480 PF00589 Phage integrase family M0D43_07480 PF02899 Phage integrase, N-terminal SAM-like domain M0D43_07500 PF03739 Lipopolysaccharide export system permease LptF/LptG M0D43_07510 PF02789 Cytosol aminopeptidase family, N-terminal domain M0D43_07510 PF00883 Cytosol aminopeptidase family, catalytic domain M0D43_07525 PF10458 Valyl tRNA synthetase tRNA binding arm M0D43_07525 PF08264 Anticodon-binding domain of tRNA M0D43_07525 PF00133 tRNA synthetases class I (I, L, M and V) M0D43_07530 PF07715 TonB-dependent Receptor Plug Domain M0D43_07530 PF00593 TonB dependent receptor M0D43_07535 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain M0D43_07535 PF01464 Transglycosylase SLT domain M0D43_07540 PF12627 Probable RNA and SrmB- binding site of polymerase A M0D43_07540 PF01966 HD domain M0D43_07540 PF01743 Poly A polymerase head domain M0D43_07555 PF01522 Polysaccharide deacetylase M0D43_07555 PF14883 Hypothetical glycosyl hydrolase family 13 M0D43_07560 PF00535 Glycosyl transferase family 2 M0D43_07575 PF01979 Amidohydrolase family M0D43_07580 PF01380 SIS domain M0D43_07585 PF00356 Bacterial regulatory proteins, lacI family M0D43_07590 PF07690 Major Facilitator Superfamily M0D43_07595 PF00392 Bacterial regulatory proteins, gntR family M0D43_07595 PF07702 UTRA domain M0D43_07610 PF02836 Glycosyl hydrolases family 2, TIM barrel domain M0D43_07610 PF00703 Glycosyl hydrolases family 2 M0D43_07610 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 M0D43_07610 PF16355 Domain of unknown function (DUF4982) M0D43_07610 PF02837 Glycosyl hydrolases family 2, sugar binding domain M0D43_07635 PF03934 Type II secretion system (T2SS), protein K M0D43_07640 PF11612 Type II secretion system (T2SS), protein J M0D43_07640 PF07963 Prokaryotic N-terminal methylation motif M0D43_07645 PF02501 Type II secretion system (T2SS), protein I M0D43_07645 PF07963 Prokaryotic N-terminal methylation motif M0D43_07650 PF12019 Type II transport protein GspH M0D43_07650 PF07963 Prokaryotic N-terminal methylation motif M0D43_07655 PF07963 Prokaryotic N-terminal methylation motif M0D43_07655 PF08334 Type II secretion system (T2SS), protein G M0D43_07660 PF00482 Type II secretion system (T2SS), protein F M0D43_07665 PF00437 Type II/IV secretion system protein M0D43_07670 PF03958 Bacterial type II/III secretion system short domain M0D43_07670 PF00263 Bacterial type II and III secretion system protein M0D43_07710 PF00106 short chain dehydrogenase M0D43_07715 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) M0D43_07720 PF00512 His Kinase A (phospho-acceptor) domain M0D43_07720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_07725 PF00072 Response regulator receiver domain M0D43_07730 PF00360 Phytochrome region M0D43_07730 PF08446 PAS fold M0D43_07730 PF01590 GAF domain M0D43_07730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_07730 PF00512 His Kinase A (phospho-acceptor) domain M0D43_07735 PF04972 BON domain M0D43_07740 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M0D43_07740 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M0D43_07745 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain M0D43_07745 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M0D43_07780 PF00293 NUDIX domain M0D43_07780 PF01467 Cytidylyltransferase-like M0D43_07790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D43_07790 PF03466 LysR substrate binding domain M0D43_07800 PF03572 Peptidase family S41 M0D43_07800 PF00595 PDZ domain M0D43_07800 PF17804 Tail specific protease N-terminal domain M0D43_07800 PF11818 C-terminal domain of tail specific protease (DUF3340) M0D43_07805 PF04055 Radical SAM superfamily M0D43_07805 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family M0D43_07810 PF03099 Biotin/lipoate A/B protein ligase family M0D43_07815 PF04359 Protein of unknown function (DUF493) M0D43_07825 PF07943 Penicillin-binding protein 5, C-terminal domain M0D43_07825 PF00768 D-alanyl-D-alanine carboxypeptidase M0D43_07830 PF03330 Lytic transglycolase M0D43_07830 PF05036 Sporulation related domain M0D43_07835 PF13406 Transglycosylase SLT domain M0D43_07840 PF00295 Glycosyl hydrolases family 28 M0D43_07850 PF01098 Cell cycle protein M0D43_07855 PF00905 Penicillin binding protein transpeptidase domain M0D43_07855 PF03717 Penicillin-binding Protein dimerisation domain M0D43_07865 PF04085 rod shape-determining protein MreC M0D43_07880 PF00294 pfkB family carbohydrate kinase M0D43_07895 PF01590 GAF domain M0D43_07895 PF02954 Bacterial regulatory protein, Fis family M0D43_07895 PF00158 Sigma-54 interaction domain M0D43_07905 PF08240 Alcohol dehydrogenase GroES-like domain M0D43_07905 PF00107 Zinc-binding dehydrogenase M0D43_07920 PF00497 Bacterial extracellular solute-binding proteins, family 3 M0D43_07925 PF13360 PQQ-like domain M0D43_07940 PF01433 Peptidase family M1 domain M0D43_07940 PF11838 ERAP1-like C-terminal domain M0D43_07945 PF00563 EAL domain M0D43_07945 PF00990 Diguanylate cyclase, GGDEF domain M0D43_07945 PF03707 Bacterial signalling protein N terminal repeat M0D43_07950 PF01209 ubiE/COQ5 methyltransferase family M0D43_07960 PF13533 Biotin-lipoyl like M0D43_07965 PF13673 Acetyltransferase (GNAT) domain M0D43_07975 PF10431 C-terminal, D2-small domain, of ClpB protein M0D43_07975 PF00004 ATPase family associated with various cellular activities (AAA) M0D43_07975 PF07724 AAA domain (Cdc48 subfamily) M0D43_07980 PF00227 Proteasome subunit M0D43_07985 PF02899 Phage integrase, N-terminal SAM-like domain M0D43_07985 PF00589 Phage integrase family M0D43_07995 PF01678 Diaminopimelate epimerase M0D43_08005 PF04304 Protein of unknown function (DUF454) M0D43_08010 PF00326 Prolyl oligopeptidase family M0D43_08010 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain M0D43_08015 PF00155 Aminotransferase class I and II M0D43_08030 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain M0D43_08030 PF00326 Prolyl oligopeptidase family M0D43_08055 PF03900 Porphobilinogen deaminase, C-terminal domain M0D43_08055 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain M0D43_08060 PF04397 LytTr DNA-binding domain M0D43_08060 PF00072 Response regulator receiver domain M0D43_08065 PF07694 5TMR of 5TMR-LYT M0D43_08065 PF06580 Histidine kinase M0D43_08075 PF13632 Glycosyl transferase family group 2 M0D43_08085 PF00990 Diguanylate cyclase, GGDEF domain M0D43_08090 PF01740 STAS domain M0D43_08090 PF00916 Sulfate permease family M0D43_08095 PF00150 Cellulase (glycosyl hydrolase family 5) M0D43_08095 PF00553 Cellulose binding domain M0D43_08100 PF02203 Tar ligand binding domain homologue M0D43_08100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D43_08100 PF00672 HAMP domain M0D43_08115 PF00563 EAL domain M0D43_08115 PF03707 Bacterial signalling protein N terminal repeat M0D43_08115 PF00990 Diguanylate cyclase, GGDEF domain M0D43_08150 PF01204 Trehalase M0D43_08165 PF01544 CorA-like Mg2+ transporter protein M0D43_08175 PF00324 Amino acid permease M0D43_08185 PF00553 Cellulose binding domain M0D43_08185 PF00041 Fibronectin type III domain M0D43_08185 PF01341 Glycosyl hydrolases family 6 M0D43_08190 PF03330 Lytic transglycolase M0D43_08195 PF00892 EamA-like transporter family M0D43_08215 PF00990 Diguanylate cyclase, GGDEF domain M0D43_08220 PF07759 Protein of unknown function (DUF1615) M0D43_08260 PF13409 Glutathione S-transferase, N-terminal domain M0D43_08270 PF00106 short chain dehydrogenase M0D43_08315 PF00580 UvrD/REP helicase N-terminal domain M0D43_08315 PF13361 UvrD-like helicase C-terminal domain M0D43_08360 PF00665 Integrase core domain M0D43_08360 PF13276 HTH-like domain M0D43_08360 PF13333 Integrase core domain M0D43_08365 PF01527 Transposase M0D43_08370 PF02374 Anion-transporting ATPase M0D43_08380 PF17831 Pyruvate dehydrogenase E1 component middle domain M0D43_08380 PF00456 Transketolase, thiamine diphosphate binding domain M0D43_08385 PF07745 Glycosyl hydrolase family 53 M0D43_08420 PF00392 Bacterial regulatory proteins, gntR family M0D43_08420 PF07729 FCD domain M0D43_08430 PF00698 Acyl transferase domain M0D43_08435 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase M0D43_08440 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG M0D43_08450 PF01039 Carboxyl transferase domain M0D43_08455 PF06857 Malonate decarboxylase delta subunit (MdcD) M0D43_08460 PF16957 Malonate decarboxylase, alpha subunit, transporter M0D43_08465 PF13847 Methyltransferase domain M0D43_08465 PF03551 Transcriptional regulator PadR-like family M0D43_08490 PF12680 SnoaL-like domain M0D43_08490 PF04542 Sigma-70 region 2 M0D43_08490 PF08281 Sigma-70, region 4 M0D43_08495 PF04264 YceI-like domain M0D43_08500 PF00881 Nitroreductase family M0D43_08525 PF02592 Putative vitamin uptake transporter M0D43_08530 PF03710 Glutamate-ammonia ligase adenylyltransferase M0D43_08530 PF08335 GlnD PII-uridylyltransferase M0D43_08540 PF08450 SMP-30/Gluconolactonase/LRE-like region M0D43_08555 PF00793 DAHP synthetase I family M0D43_08565 PF00593 TonB dependent receptor M0D43_08565 PF07715 TonB-dependent Receptor Plug Domain M0D43_08570 PF05598 Transposase domain (DUF772) M0D43_08570 PF01609 Transposase DDE domain M0D43_08605 PF00118 TCP-1/cpn60 chaperonin family M0D43_08610 PF00166 Chaperonin 10 Kd subunit M0D43_08615 PF04231 Endonuclease I M0D43_08620 PF03091 CutA1 divalent ion tolerance protein M0D43_08625 PF02683 Cytochrome C biogenesis protein transmembrane region M0D43_08625 PF11412 Disulphide bond corrector protein DsbC M0D43_08630 PF00326 Prolyl oligopeptidase family M0D43_08630 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain M0D43_08635 PF01220 Dehydroquinase class II M0D43_08640 PF00364 Biotin-requiring enzyme M0D43_08650 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M0D43_08650 PF02785 Biotin carboxylase C-terminal domain M0D43_08650 PF00289 Biotin carboxylase, N-terminal domain M0D43_08685 PF01381 Helix-turn-helix M0D43_08695 PF02954 Bacterial regulatory protein, Fis family M0D43_08700 PF00818 Ice nucleation protein repeat M0D43_08700 PF00818 Ice nucleation protein repeat M0D43_08710 PF01808 AICARFT/IMPCHase bienzyme M0D43_08710 PF02142 MGS-like domain M0D43_08715 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain M0D43_08715 PF02843 Phosphoribosylglycinamide synthetase, C domain M0D43_08715 PF02844 Phosphoribosylglycinamide synthetase, N domain M0D43_08720 PF12805 FUSC-like inner membrane protein yccS M0D43_08725 PF07690 Major Facilitator Superfamily M0D43_08730 PF03466 LysR substrate binding domain M0D43_08730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D43_08735 PF07690 Major Facilitator Superfamily M0D43_08750 PF03186 CobD/Cbib protein M0D43_08750 PF17113 Regulatory signalling modulator protein AmpE M0D43_08755 PF00293 NUDIX domain M0D43_08755 PF09297 NADH pyrophosphatase zinc ribbon domain M0D43_08755 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain M0D43_08765 PF01521 Iron-sulphur cluster biosynthesis M0D43_08785 PF00563 EAL domain M0D43_08785 PF00990 Diguanylate cyclase, GGDEF domain M0D43_08785 PF03707 Bacterial signalling protein N terminal repeat M0D43_08790 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M0D43_08790 PF01627 Hpt domain M0D43_08790 PF00512 His Kinase A (phospho-acceptor) domain M0D43_08790 PF00672 HAMP domain M0D43_08790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_08790 PF00072 Response regulator receiver domain M0D43_08795 PF00210 Ferritin-like domain M0D43_08805 PF00293 NUDIX domain M0D43_08820 PF00380 Ribosomal protein S9/S16 M0D43_08825 PF00572 Ribosomal protein L13 M0D43_08830 PF03232 Ubiquinone biosynthesis protein COQ7 M0D43_08835 PF00893 Small Multidrug Resistance protein M0D43_08840 PF02675 S-adenosylmethionine decarboxylase M0D43_08845 PF00027 Cyclic nucleotide-binding domain M0D43_08845 PF00325 Bacterial regulatory proteins, crp family M0D43_08855 PF00218 Indole-3-glycerol phosphate synthase M0D43_08860 PF02885 Glycosyl transferase family, helical bundle domain M0D43_08860 PF00591 Glycosyl transferase family, a/b domain M0D43_08870 PF00117 Glutamine amidotransferase class-I M0D43_08885 PF04715 Anthranilate synthase component I, N terminal region M0D43_08885 PF00425 chorismate binding enzyme M0D43_08890 PF00781 Diacylglycerol kinase catalytic domain M0D43_08895 PF00583 Acetyltransferase (GNAT) family M0D43_08900 PF00834 Ribulose-phosphate 3 epimerase family M0D43_08910 PF05099 Tellurite resistance protein TerB M0D43_08910 PF00226 DnaJ domain M0D43_08915 PF01259 SAICAR synthetase M0D43_08930 PF07504 Fungalysin/Thermolysin Propeptide Motif M0D43_08930 PF01447 Thermolysin metallopeptidase, catalytic domain M0D43_08930 PF01483 Proprotein convertase P-domain M0D43_08930 PF02868 Thermolysin metallopeptidase, alpha-helical domain M0D43_08950 PF13244 Domain of unknown function (DUF4040) M0D43_08950 PF00361 Proton-conducting membrane transporter M0D43_08950 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M0D43_08950 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter M0D43_08955 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L M0D43_08960 PF00361 Proton-conducting membrane transporter M0D43_08970 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) M0D43_08975 PF03334 Na+/H+ antiporter subunit M0D43_08995 PF04209 homogentisate 1,2-dioxygenase M0D43_09000 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M0D43_09005 PF01047 MarR family M0D43_09015 PF00854 POT family M0D43_09020 PF03301 Tryptophan 2,3-dioxygenase M0D43_09030 PF00676 Dehydrogenase E1 component M0D43_09035 PF02779 Transketolase, pyrimidine binding domain M0D43_09035 PF02780 Transketolase, C-terminal domain M0D43_09045 PF02817 e3 binding domain M0D43_09045 PF00364 Biotin-requiring enzyme M0D43_09045 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M0D43_09055 PF00270 DEAD/DEAH box helicase M0D43_09055 PF00271 Helicase conserved C-terminal domain M0D43_09065 PF06903 VirK protein M0D43_09095 PF13460 NAD(P)H-binding M0D43_09100 PF00128 Alpha amylase, catalytic domain M0D43_09100 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) M0D43_09110 PF00128 Alpha amylase, catalytic domain M0D43_09115 PF02446 4-alpha-glucanotransferase M0D43_09120 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) M0D43_09120 PF11941 Domain of unknown function (DUF3459) M0D43_09120 PF00128 Alpha amylase, catalytic domain M0D43_09125 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) M0D43_09125 PF02806 Alpha amylase, C-terminal all-beta domain M0D43_09125 PF00128 Alpha amylase, catalytic domain M0D43_09130 PF08323 Starch synthase catalytic domain M0D43_09130 PF00534 Glycosyl transferases group 1 M0D43_09135 PF00990 Diguanylate cyclase, GGDEF domain M0D43_09140 PF02638 Glycosyl hydrolase-like 10 M0D43_09145 PF05661 Protein of unknown function (DUF808) M0D43_09150 PF03109 ABC1 family M0D43_09155 PF00884 Sulfatase M0D43_09160 PF00924 Mechanosensitive ion channel M0D43_09160 PF12794 Mechanosensitive ion channel inner membrane domain 1 M0D43_09160 PF12795 Mechanosensitive ion channel porin domain M0D43_09180 PF01464 Transglycosylase SLT domain M0D43_09190 PF03958 Bacterial type II/III secretion system short domain M0D43_09190 PF00263 Bacterial type II and III secretion system protein M0D43_09195 PF01311 Bacterial export proteins, family 1 M0D43_09205 PF18269 T3SS EscN ATPase C-terminal domain M0D43_09205 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M0D43_09205 PF02874 ATP synthase alpha/beta family, beta-barrel domain M0D43_09220 PF01514 Secretory protein of YscJ/FliF family M0D43_09235 PF01312 FlhB HrpN YscU SpaS Family M0D43_09240 PF00771 FHIPEP family M0D43_09255 PF00813 FliP family M0D43_09260 PF01313 Bacterial export proteins, family 3 M0D43_09300 PF05819 NolX protein M0D43_09315 PF01040 UbiA prenyltransferase family M0D43_09325 PF04055 Radical SAM superfamily M0D43_09325 PF06968 Biotin and Thiamin Synthesis associated domain M0D43_09330 PF00155 Aminotransferase class I and II M0D43_09340 PF12697 Alpha/beta hydrolase family M0D43_09350 PF13649 Methyltransferase domain M0D43_09370 PF00291 Pyridoxal-phosphate dependent enzyme M0D43_09385 PF01134 Glucose inhibited division protein A M0D43_09385 PF13932 GidA associated domain M0D43_09395 PF07859 alpha/beta hydrolase fold M0D43_09405 PF01614 Bacterial transcriptional regulator M0D43_09405 PF09339 IclR helix-turn-helix domain M0D43_09420 PF02627 Carboxymuconolactone decarboxylase family M0D43_09425 PF12146 Serine aminopeptidase, S33 M0D43_09430 PF10397 Adenylosuccinate lyase C-terminus M0D43_09430 PF00206 Lyase M0D43_09440 PF00775 Dioxygenase M0D43_09440 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal M0D43_09445 PF02803 Thiolase, C-terminal domain M0D43_09445 PF00108 Thiolase, N-terminal domain M0D43_09450 PF01144 Coenzyme A transferase M0D43_09455 PF01144 Coenzyme A transferase M0D43_09460 PF00355 Rieske [2Fe-2S] domain M0D43_09465 PF00970 Oxidoreductase FAD-binding domain M0D43_09465 PF00111 2Fe-2S iron-sulfur cluster binding domain M0D43_09475 PF00455 DeoR C terminal sensor domain M0D43_09475 PF08220 DeoR-like helix-turn-helix domain M0D43_09480 PF01266 FAD dependent oxidoreductase M0D43_09480 PF16901 C-terminal domain of alpha-glycerophosphate oxidase M0D43_09485 PF00230 Major intrinsic protein M0D43_09490 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M0D43_09490 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M0D43_09500 PF01494 FAD binding domain M0D43_09510 PF00171 Aldehyde dehydrogenase family M0D43_09530 PF01966 HD domain M0D43_09530 PF11871 Domain of unknown function (DUF3391) M0D43_09535 PF07690 Major Facilitator Superfamily M0D43_09545 PF00132 Bacterial transferase hexapeptide (six repeats) M0D43_09550 PF03692 Putative zinc- or iron-chelating domain M0D43_09555 PF00920 Dehydratase family M0D43_09560 PF00589 Phage integrase family M0D43_09560 PF13495 Phage integrase, N-terminal SAM-like domain M0D43_09600 PF01638 HxlR-like helix-turn-helix M0D43_09605 PF05368 NmrA-like family M0D43_09615 PF03812 2-keto-3-deoxygluconate permease M0D43_09620 PF01717 Cobalamin-independent synthase, Catalytic domain M0D43_09620 PF08267 Cobalamin-independent synthase, N-terminal domain M0D43_09630 PF03358 NADPH-dependent FMN reductase M0D43_09635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D43_09635 PF03466 LysR substrate binding domain M0D43_09640 PF02677 Epoxyqueuosine reductase QueH M0D43_09675 PF00551 Formyl transferase M0D43_09690 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M0D43_09690 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M0D43_09695 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M0D43_09700 PF02146 Sir2 family M0D43_09705 PF00561 alpha/beta hydrolase fold M0D43_09720 PF07690 Major Facilitator Superfamily M0D43_09725 PF03466 LysR substrate binding domain M0D43_09725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D43_09730 PF01026 TatD related DNase M0D43_09735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D43_09735 PF03466 LysR substrate binding domain M0D43_09740 PF00355 Rieske [2Fe-2S] domain M0D43_09745 PF00175 Oxidoreductase NAD-binding domain M0D43_09745 PF00111 2Fe-2S iron-sulfur cluster binding domain M0D43_09750 PF00860 Permease family M0D43_09760 PF01156 Inosine-uridine preferring nucleoside hydrolase M0D43_09770 PF01425 Amidase M0D43_09795 PF00561 alpha/beta hydrolase fold M0D43_09800 PF03466 LysR substrate binding domain M0D43_09800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D43_09805 PF07687 Peptidase dimerisation domain M0D43_09805 PF01546 Peptidase family M20/M25/M40 M0D43_09810 PF00266 Aminotransferase class-V M0D43_09825 PF09349 OHCU decarboxylase M0D43_09825 PF01014 Uricase M0D43_09830 PF13454 FAD-NAD(P)-binding M0D43_09835 PF00576 HIUase/Transthyretin family M0D43_09840 PF07308 Protein of unknown function (DUF1456) M0D43_09850 PF08482 ATP-dependent helicase C-terminal M0D43_09850 PF00271 Helicase conserved C-terminal domain M0D43_09850 PF00270 DEAD/DEAH box helicase M0D43_09850 PF04408 Helicase associated domain (HA2) M0D43_09860 PF00849 RNA pseudouridylate synthase M0D43_09870 PF00248 Aldo/keto reductase family M0D43_09875 PF16884 N-terminal domain of oxidoreductase M0D43_09875 PF00107 Zinc-binding dehydrogenase M0D43_09880 PF00248 Aldo/keto reductase family M0D43_09900 PF02566 OsmC-like protein M0D43_09905 PF01047 MarR family M0D43_09910 PF03969 AFG1-like ATPase M0D43_09930 PF02492 CobW/HypB/UreG, nucleotide-binding domain M0D43_09930 PF07683 Cobalamin synthesis protein cobW C-terminal domain M0D43_09985 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M0D43_09985 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M0D43_09985 PF02770 Acyl-CoA dehydrogenase, middle domain M0D43_09990 PF01039 Carboxyl transferase domain M0D43_09995 PF18140 Propionyl-coenzyme A carboxylase BT domain M0D43_09995 PF00364 Biotin-requiring enzyme M0D43_09995 PF02785 Biotin carboxylase C-terminal domain M0D43_09995 PF00289 Biotin carboxylase, N-terminal domain M0D43_09995 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M0D43_10000 PF00326 Prolyl oligopeptidase family M0D43_10020 PF00990 Diguanylate cyclase, GGDEF domain M0D43_10025 PF00463 Isocitrate lyase family M0D43_10030 PF01274 Malate synthase M0D43_10035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D43_10035 PF03466 LysR substrate binding domain M0D43_10040 PF00999 Sodium/hydrogen exchanger family M0D43_10060 PF12706 Beta-lactamase superfamily domain M0D43_10070 PF10502 Signal peptidase, peptidase S26 M0D43_10075 PF01432 Peptidase family M3 M0D43_10080 PF01112 Asparaginase M0D43_10090 PF00472 RF-1 domain M0D43_10100 PF00849 RNA pseudouridylate synthase M0D43_10115 PF03109 ABC1 family M0D43_10125 PF07478 D-ala D-ala ligase C-terminus M0D43_10125 PF01820 D-ala D-ala ligase N-terminus M0D43_10135 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family M0D43_10140 PF00501 AMP-binding enzyme M0D43_10145 PF03692 Putative zinc- or iron-chelating domain M0D43_10150 PF00561 alpha/beta hydrolase fold M0D43_10155 PF02661 Fic/DOC family M0D43_10155 PF13784 Fic/DOC family N-terminal M0D43_10160 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M0D43_10160 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M0D43_10175 PF00588 SpoU rRNA Methylase family M0D43_10180 PF07690 Major Facilitator Superfamily M0D43_10195 PF00072 Response regulator receiver domain M0D43_10195 PF02954 Bacterial regulatory protein, Fis family M0D43_10195 PF00158 Sigma-54 interaction domain M0D43_10200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_10205 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M0D43_10205 PF00205 Thiamine pyrophosphate enzyme, central domain M0D43_10205 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M0D43_10215 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus M0D43_10215 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus M0D43_10220 PF02556 Preprotein translocase subunit SecB M0D43_10225 PF00581 Rhodanese-like domain M0D43_10265 PF02803 Thiolase, C-terminal domain M0D43_10265 PF00108 Thiolase, N-terminal domain M0D43_10275 PF03544 Gram-negative bacterial TonB protein C-terminal M0D43_10280 PF00080 Copper/zinc superoxide dismutase (SODC) M0D43_10285 PF00080 Copper/zinc superoxide dismutase (SODC) M0D43_10290 PF02954 Bacterial regulatory protein, Fis family M0D43_10290 PF00072 Response regulator receiver domain M0D43_10290 PF00158 Sigma-54 interaction domain M0D43_10295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_10295 PF00512 His Kinase A (phospho-acceptor) domain M0D43_10295 PF00989 PAS fold M0D43_10300 PF00909 Ammonium Transporter Family M0D43_10305 PF00543 Nitrogen regulatory protein P-II M0D43_10310 PF00120 Glutamine synthetase, catalytic domain M0D43_10310 PF03951 Glutamine synthetase, beta-Grasp domain M0D43_10315 PF02673 Bacitracin resistance protein BacA M0D43_10325 PF08240 Alcohol dehydrogenase GroES-like domain M0D43_10325 PF00107 Zinc-binding dehydrogenase M0D43_10350 PF03061 Thioesterase superfamily M0D43_10355 PF13091 PLD-like domain M0D43_10370 PF01883 Iron-sulfur cluster assembly protein M0D43_10370 PF10609 NUBPL iron-transfer P-loop NTPase M0D43_10390 PF01381 Helix-turn-helix M0D43_10395 PF13657 HipA N-terminal domain M0D43_10395 PF07804 HipA-like C-terminal domain M0D43_10400 PF10017 Histidine-specific methyltransferase, SAM-dependent M0D43_10405 PF12867 DinB superfamily M0D43_10405 PF03781 Sulfatase-modifying factor enzyme 1 M0D43_10415 PF00528 Binding-protein-dependent transport system inner membrane component M0D43_10420 PF00005 ABC transporter M0D43_10420 PF00571 CBS domain M0D43_10435 PF00005 ABC transporter M0D43_10445 PF07687 Peptidase dimerisation domain M0D43_10445 PF01546 Peptidase family M20/M25/M40 M0D43_10450 PF01734 Patatin-like phospholipase M0D43_10455 PF00593 TonB dependent receptor M0D43_10455 PF07660 Secretin and TonB N terminus short domain M0D43_10455 PF07715 TonB-dependent Receptor Plug Domain M0D43_10460 PF01037 Lrp/AsnC ligand binding domain M0D43_10465 PF00351 Biopterin-dependent aromatic amino acid hydroxylase M0D43_10475 PF00657 GDSL-like Lipase/Acylhydrolase M0D43_10490 PF04962 KduI/IolB family M0D43_10495 PF00356 Bacterial regulatory proteins, lacI family M0D43_10500 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain M0D43_10500 PF04616 Glycosyl hydrolases family 43 M0D43_10505 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M0D43_10515 PF03480 Bacterial extracellular solute-binding protein, family 7 M0D43_10525 PF07859 alpha/beta hydrolase fold M0D43_10525 PF13472 GDSL-like Lipase/Acylhydrolase family M0D43_10530 PF00135 Carboxylesterase family M0D43_10535 PF13472 GDSL-like Lipase/Acylhydrolase family M0D43_10540 PF00248 Aldo/keto reductase family M0D43_10570 PF00128 Alpha amylase, catalytic domain M0D43_10570 PF02806 Alpha amylase, C-terminal all-beta domain M0D43_10570 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) M0D43_10575 PF16657 Maltogenic Amylase, C-terminal domain M0D43_10575 PF00128 Alpha amylase, catalytic domain M0D43_10580 PF11896 Domain of unknown function (DUF3416) M0D43_10580 PF00128 Alpha amylase, catalytic domain M0D43_10585 PF08479 POTRA domain, ShlB-type M0D43_10585 PF17287 POTRA domain M0D43_10585 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB M0D43_10595 PF05594 Haemagluttinin repeat M0D43_10595 PF13332 Hemagglutinin repeat M0D43_10595 PF04829 Pre-toxin domain with VENN motif M0D43_10605 PF04829 Pre-toxin domain with VENN motif M0D43_10605 PF13018 Extended Signal Peptide of Type V secretion system M0D43_10605 PF13332 Hemagglutinin repeat M0D43_10605 PF05860 haemagglutination activity domain M0D43_10615 PF05860 haemagglutination activity domain M0D43_10615 PF13332 Hemagglutinin repeat M0D43_10615 PF04829 Pre-toxin domain with VENN motif M0D43_10620 PF13018 Extended Signal Peptide of Type V secretion system M0D43_10620 PF13332 Hemagglutinin repeat M0D43_10620 PF05860 haemagglutination activity domain M0D43_10620 PF04829 Pre-toxin domain with VENN motif M0D43_10665 PF11798 IMS family HHH motif M0D43_10665 PF00817 impB/mucB/samB family M0D43_10665 PF13438 Domain of unknown function (DUF4113) M0D43_10665 PF11799 impB/mucB/samB family C-terminal domain M0D43_10705 PF00294 pfkB family carbohydrate kinase M0D43_10715 PF07055 Enoyl reductase FAD binding domain M0D43_10715 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase M0D43_10715 PF12241 Trans-2-enoyl-CoA reductase catalytic region M0D43_10720 PF18500 CadC C-terminal domain 1 M0D43_10720 PF00486 Transcriptional regulatory protein, C terminal M0D43_10740 PF00196 Bacterial regulatory proteins, luxR family M0D43_10740 PF00072 Response regulator receiver domain M0D43_10745 PF07730 Histidine kinase M0D43_10750 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family M0D43_10755 PF01070 FMN-dependent dehydrogenase M0D43_10760 PF02735 Ku70/Ku80 beta-barrel domain M0D43_10780 PF00171 Aldehyde dehydrogenase family M0D43_10785 PF00593 TonB dependent receptor M0D43_10785 PF07715 TonB-dependent Receptor Plug Domain M0D43_10790 PF00155 Aminotransferase class I and II M0D43_10795 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain M0D43_10845 PF17863 AAA lid domain M0D43_10845 PF07726 ATPase family associated with various cellular activities (AAA) M0D43_10885 PF08946 Osmosensory transporter coiled coil M0D43_10885 PF00083 Sugar (and other) transporter M0D43_10890 PF00085 Thioredoxin M0D43_10905 PF13344 Haloacid dehalogenase-like hydrolase M0D43_10905 PF00293 NUDIX domain M0D43_10915 PF01447 Thermolysin metallopeptidase, catalytic domain M0D43_10915 PF02868 Thermolysin metallopeptidase, alpha-helical domain M0D43_10915 PF16485 Protealysin propeptide M0D43_10935 PF08448 PAS fold M0D43_10935 PF13188 PAS domain M0D43_10935 PF00072 Response regulator receiver domain M0D43_10935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_10935 PF00512 His Kinase A (phospho-acceptor) domain M0D43_10945 PF00196 Bacterial regulatory proteins, luxR family M0D43_10945 PF00072 Response regulator receiver domain M0D43_10950 PF05532 CsbD-like M0D43_10960 PF00043 Glutathione S-transferase, C-terminal domain M0D43_10960 PF02798 Glutathione S-transferase, N-terminal domain M0D43_10970 PF03006 Haemolysin-III related M0D43_10975 PF00270 DEAD/DEAH box helicase M0D43_10975 PF09369 Domain of unknown function (DUF1998) M0D43_10975 PF00271 Helicase conserved C-terminal domain M0D43_11050 PF00685 Sulfotransferase domain M0D43_11055 PF07475 HPr Serine kinase C-terminal domain M0D43_11055 PF02603 HPr Serine kinase N terminus M0D43_11075 PF00733 Asparagine synthase M0D43_11075 PF13537 Glutamine amidotransferase domain M0D43_11085 PF00664 ABC transporter transmembrane region M0D43_11085 PF00005 ABC transporter M0D43_11100 PF16363 GDP-mannose 4,6 dehydratase M0D43_11115 PF00733 Asparagine synthase M0D43_11115 PF13537 Glutamine amidotransferase domain M0D43_11135 PF13439 Glycosyltransferase Family 4 M0D43_11135 PF00534 Glycosyl transferases group 1 M0D43_11140 PF03808 Glycosyl transferase WecB/TagA/CpsF family M0D43_11155 PF02350 UDP-N-acetylglucosamine 2-epimerase M0D43_11160 PF02397 Bacterial sugar transferase M0D43_11180 PF06165 Glycosyltransferase family 36 M0D43_11180 PF10091 Putative glucoamylase M0D43_11180 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain M0D43_11220 PF00310 Glutamine amidotransferases class-II M0D43_11220 PF04898 Glutamate synthase central domain M0D43_11220 PF01645 Conserved region in glutamate synthase M0D43_11220 PF01493 GXGXG motif M0D43_11225 PF07992 Pyridine nucleotide-disulphide oxidoreductase M0D43_11225 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster M0D43_11240 PF00107 Zinc-binding dehydrogenase M0D43_11240 PF08240 Alcohol dehydrogenase GroES-like domain M0D43_11245 PF00150 Cellulase (glycosyl hydrolase family 5) M0D43_11250 PF00150 Cellulase (glycosyl hydrolase family 5) M0D43_11255 PF00150 Cellulase (glycosyl hydrolase family 5) M0D43_11265 PF04389 Peptidase family M28 M0D43_11275 PF01551 Peptidase family M23 M0D43_11280 PF03572 Peptidase family S41 M0D43_11280 PF13180 PDZ domain M0D43_11285 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M0D43_11285 PF01842 ACT domain M0D43_11285 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M0D43_11300 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) M0D43_11310 PF04055 Radical SAM superfamily M0D43_11325 PF13091 PLD-like domain M0D43_11325 PF13396 Phospholipase_D-nuclease N-terminal M0D43_11335 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ M0D43_11345 PF02472 Biopolymer transport protein ExbD/TolR M0D43_11350 PF02472 Biopolymer transport protein ExbD/TolR M0D43_11355 PF01618 MotA/TolQ/ExbB proton channel family M0D43_11360 PF03544 Gram-negative bacterial TonB protein C-terminal M0D43_11370 PF01435 Peptidase family M48 M0D43_11380 PF18053 DNA gyrase B subunit insert domain M0D43_11380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_11380 PF00986 DNA gyrase B subunit, carboxyl terminus M0D43_11380 PF01751 Toprim domain M0D43_11380 PF00204 DNA gyrase B M0D43_11385 PF02463 RecF/RecN/SMC N terminal domain M0D43_11390 PF00712 DNA polymerase III beta subunit, N-terminal domain M0D43_11390 PF02767 DNA polymerase III beta subunit, central domain M0D43_11390 PF02768 DNA polymerase III beta subunit, C-terminal domain M0D43_11395 PF00308 Bacterial dnaA protein M0D43_11395 PF11638 DnaA N-terminal domain M0D43_11395 PF08299 Bacterial dnaA protein helix-turn-helix M0D43_11400 PF00468 Ribosomal protein L34 M0D43_11405 PF00825 Ribonuclease P M0D43_11410 PF02096 60Kd inner membrane protein M0D43_11410 PF14849 YidC periplasmic domain M0D43_11415 PF01522 Polysaccharide deacetylase M0D43_11420 PF01926 50S ribosome-binding GTPase M0D43_11420 PF12631 MnmE helical domain M0D43_11420 PF10396 GTP-binding protein TrmE N-terminus M0D43_11425 PF01569 PAP2 superfamily M0D43_11435 PF03009 Glycerophosphoryl diester phosphodiesterase family M0D43_11440 PF01694 Rhomboid family M0D43_11445 PF03741 Integral membrane protein TerC family M0D43_11450 PF17785 PUA-like domain M0D43_11450 PF10672 S-adenosylmethionine-dependent methyltransferase M0D43_11465 PF07690 Major Facilitator Superfamily M0D43_11470 PF02595 Glycerate kinase family M0D43_11475 PF17853 GGDEF-like domain M0D43_11475 PF13556 PucR C-terminal helix-turn-helix domain M0D43_11475 PF05651 Putative sugar diacid recognition M0D43_11480 PF00990 Diguanylate cyclase, GGDEF domain M0D43_11480 PF08448 PAS fold M0D43_11485 PF10947 Protein of unknown function (DUF2628) M0D43_11500 PF17678 Glycosyl hydrolase family 92 N-terminal domain M0D43_11500 PF07971 Glycosyl hydrolase family 92 M0D43_11505 PF13520 Amino acid permease M0D43_11525 PF03466 LysR substrate binding domain M0D43_11525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D43_11530 PF00107 Zinc-binding dehydrogenase M0D43_11530 PF08240 Alcohol dehydrogenase GroES-like domain M0D43_11535 PF02646 RmuC family M0D43_11545 PF00255 Glutathione peroxidase M0D43_11555 PF04333 MlaA lipoprotein M0D43_11565 PF05494 MlaC protein M0D43_11575 PF02405 Permease MlaE M0D43_11580 PF00005 ABC transporter M0D43_11585 PF17946 RecC C-terminal domain M0D43_11590 PF00580 UvrD/REP helicase N-terminal domain M0D43_11590 PF13361 UvrD-like helicase C-terminal domain M0D43_11590 PF12705 PD-(D/E)XK nuclease superfamily M0D43_11595 PF13538 UvrD-like helicase C-terminal domain M0D43_11635 PF00849 RNA pseudouridylate synthase M0D43_11680 PF13091 PLD-like domain M0D43_11680 PF13396 Phospholipase_D-nuclease N-terminal M0D43_11715 PF00083 Sugar (and other) transporter M0D43_11720 PF04632 Fusaric acid resistance protein family M0D43_11725 PF02321 Outer membrane efflux protein M0D43_11730 PF13533 Biotin-lipoyl like M0D43_11745 PF01227 GTP cyclohydrolase I M0D43_11765 PF01925 Sulfite exporter TauE/SafE M0D43_11770 PF02810 SEC-C motif M0D43_11780 PF01263 Aldose 1-epimerase M0D43_11785 PF07690 Major Facilitator Superfamily M0D43_11790 PF01126 Heme oxygenase M0D43_11795 PF08446 PAS fold M0D43_11795 PF01590 GAF domain M0D43_11795 PF00360 Phytochrome region M0D43_11795 PF13426 PAS domain M0D43_11800 PF03594 Benzoate membrane transport protein M0D43_11830 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain M0D43_11830 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain M0D43_11830 PF06827 Zinc finger found in FPG and IleRS M0D43_11840 PF04349 Periplasmic glucan biosynthesis protein, MdoG M0D43_11845 PF08446 PAS fold M0D43_11845 PF00360 Phytochrome region M0D43_11845 PF01590 GAF domain M0D43_11845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_11845 PF00512 His Kinase A (phospho-acceptor) domain M0D43_11850 PF00265 Thymidine kinase M0D43_11855 PF00580 UvrD/REP helicase N-terminal domain M0D43_11855 PF13361 UvrD-like helicase C-terminal domain M0D43_11870 PF04337 Protein of unknown function, DUF480 M0D43_11875 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) M0D43_11880 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family M0D43_11885 PF04820 Tryptophan halogenase M0D43_11900 PF00356 Bacterial regulatory proteins, lacI family M0D43_11910 PF01553 Acyltransferase M0D43_11915 PF08659 KR domain M0D43_11915 PF14765 Polyketide synthase dehydratase M0D43_11915 PF00550 Phosphopantetheine attachment site M0D43_11915 PF02801 Beta-ketoacyl synthase, C-terminal domain M0D43_11915 PF16197 Ketoacyl-synthetase C-terminal extension M0D43_11915 PF00109 Beta-ketoacyl synthase, N-terminal domain M0D43_11915 PF08240 Alcohol dehydrogenase GroES-like domain M0D43_11915 PF00698 Acyl transferase domain M0D43_11915 PF00107 Zinc-binding dehydrogenase M0D43_11960 PF04616 Glycosyl hydrolases family 43 M0D43_11980 PF00553 Cellulose binding domain M0D43_11980 PF00331 Glycosyl hydrolase family 10 M0D43_11980 PF03422 Carbohydrate binding module (family 6) M0D43_12000 PF02614 Glucuronate isomerase M0D43_12005 PF02836 Glycosyl hydrolases family 2, TIM barrel domain M0D43_12005 PF02837 Glycosyl hydrolases family 2, sugar binding domain M0D43_12005 PF00703 Glycosyl hydrolases family 2 M0D43_12005 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 M0D43_12005 PF16355 Domain of unknown function (DUF4982) M0D43_12015 PF00331 Glycosyl hydrolase family 10 M0D43_12020 PF08450 SMP-30/Gluconolactonase/LRE-like region M0D43_12045 PF01232 Mannitol dehydrogenase Rossmann domain M0D43_12045 PF08125 Mannitol dehydrogenase C-terminal domain M0D43_12050 PF01915 Glycosyl hydrolase family 3 C-terminal domain M0D43_12050 PF00933 Glycosyl hydrolase family 3 N terminal domain M0D43_12050 PF07691 PA14 domain M0D43_12050 PF14310 Fibronectin type III-like domain M0D43_12055 PF04616 Glycosyl hydrolases family 43 M0D43_12055 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain M0D43_12060 PF13378 Enolase C-terminal domain-like M0D43_12060 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M0D43_12070 PF07477 Glycosyl hydrolase family 67 C-terminus M0D43_12070 PF07488 Glycosyl hydrolase family 67 middle domain M0D43_12070 PF03648 Glycosyl hydrolase family 67 N-terminus M0D43_12075 PF00356 Bacterial regulatory proteins, lacI family M0D43_12085 PF01171 PP-loop family M0D43_12090 PF04381 Putative exonuclease, RdgC M0D43_12100 PF12697 Alpha/beta hydrolase family M0D43_12105 PF00762 Ferrochelatase M0D43_12115 PF02416 mttA/Hcf106 family M0D43_12120 PF02416 mttA/Hcf106 family M0D43_12125 PF00902 Sec-independent protein translocase protein (TatC) M0D43_12135 PF00958 GMP synthase C terminal domain M0D43_12135 PF00117 Glutamine amidotransferase class-I M0D43_12145 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M0D43_12145 PF00437 Type II/IV secretion system protein M0D43_12150 PF02091 Glycyl-tRNA synthetase alpha subunit M0D43_12155 PF05746 DALR anticodon binding domain M0D43_12155 PF02092 Glycyl-tRNA synthetase beta subunit M0D43_12160 PF13181 Tetratricopeptide repeat M0D43_12165 PF07715 TonB-dependent Receptor Plug Domain M0D43_12165 PF00593 TonB dependent receptor M0D43_12170 PF01103 Surface antigen M0D43_12170 PF17243 POTRA domain TamA domain 1 M0D43_12175 PF04357 TamB, inner membrane protein subunit of TAM complex M0D43_12195 PF01011 PQQ enzyme repeat M0D43_12195 PF13360 PQQ-like domain M0D43_12195 PF13570 PQQ-like domain M0D43_12210 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain M0D43_12210 PF06165 Glycosyltransferase family 36 M0D43_12220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_12220 PF00512 His Kinase A (phospho-acceptor) domain M0D43_12225 PF02659 Putative manganese efflux pump M0D43_12240 PF01614 Bacterial transcriptional regulator M0D43_12240 PF09339 IclR helix-turn-helix domain M0D43_12245 PF07690 Major Facilitator Superfamily M0D43_12250 PF05336 L-rhamnose mutarotase M0D43_12255 PF13378 Enolase C-terminal domain-like M0D43_12255 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M0D43_12260 PF01557 Fumarylacetoacetate (FAA) hydrolase family M0D43_12275 PF00248 Aldo/keto reductase family M0D43_12300 PF00196 Bacterial regulatory proteins, luxR family M0D43_12300 PF00072 Response regulator receiver domain M0D43_12305 PF16177 Acetyl-coenzyme A synthetase N-terminus M0D43_12305 PF00501 AMP-binding enzyme M0D43_12305 PF13193 AMP-binding enzyme C-terminal domain M0D43_12315 PF04341 Protein of unknown function, DUF485 M0D43_12320 PF00474 Sodium:solute symporter family M0D43_12325 PF00480 ROK family M0D43_12340 PF04226 Transglycosylase associated protein M0D43_12345 PF01648 4'-phosphopantetheinyl transferase superfamily M0D43_12350 PF16655 PhoD-like phosphatase, N-terminal domain M0D43_12350 PF09423 PhoD-like phosphatase M0D43_12355 PF16655 PhoD-like phosphatase, N-terminal domain M0D43_12355 PF09423 PhoD-like phosphatase M0D43_12360 PF02527 rRNA small subunit methyltransferase G M0D43_12380 PF13533 Biotin-lipoyl like M0D43_12390 PF00873 AcrB/AcrD/AcrF family M0D43_12395 PF00830 Ribosomal L28 family M0D43_12400 PF00471 Ribosomal protein L33 M0D43_12405 PF04909 Amidohydrolase M0D43_12410 PF04303 PrpF protein M0D43_12415 PF03737 Aldolase/RraA M0D43_12420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D43_12420 PF03466 LysR substrate binding domain M0D43_12425 PF13091 PLD-like domain M0D43_12425 PF13396 Phospholipase_D-nuclease N-terminal M0D43_12440 PF00580 UvrD/REP helicase N-terminal domain M0D43_12440 PF13361 UvrD-like helicase C-terminal domain M0D43_12450 PF14602 Hexapeptide repeat of succinyl-transferase M0D43_12450 PF12464 Maltose acetyltransferase M0D43_12495 PF00328 Histidine phosphatase superfamily (branch 2) M0D43_12510 PF08281 Sigma-70, region 4 M0D43_12510 PF04542 Sigma-70 region 2 M0D43_12520 PF03793 PASTA domain M0D43_12520 PF00069 Protein kinase domain M0D43_12530 PF00476 DNA polymerase family A M0D43_12530 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M0D43_12530 PF01367 5'-3' exonuclease, C-terminal SAM fold M0D43_12530 PF01612 3'-5' exonuclease M0D43_12540 PF01218 Coproporphyrinogen III oxidase M0D43_12555 PF00326 Prolyl oligopeptidase family M0D43_12555 PF07676 WD40-like Beta Propeller Repeat M0D43_12570 PF01494 FAD binding domain M0D43_12575 PF00550 Phosphopantetheine attachment site M0D43_12585 PF01553 Acyltransferase M0D43_12635 PF00535 Glycosyl transferase family 2 M0D43_12645 PF00109 Beta-ketoacyl synthase, N-terminal domain M0D43_12645 PF02801 Beta-ketoacyl synthase, C-terminal domain M0D43_12650 PF05166 YcgL domain M0D43_12665 PF00723 Glycosyl hydrolases family 15 M0D43_12670 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain M0D43_12670 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain M0D43_12695 PF00999 Sodium/hydrogen exchanger family M0D43_12695 PF02254 TrkA-N domain M0D43_12700 PF01769 Divalent cation transporter M0D43_12700 PF03448 MgtE intracellular N domain M0D43_12700 PF00571 CBS domain M0D43_12710 PF00583 Acetyltransferase (GNAT) family M0D43_12710 PF13380 CoA binding domain M0D43_12710 PF13607 Succinyl-CoA ligase like flavodoxin domain M0D43_12720 PF02867 Ribonucleotide reductase, barrel domain M0D43_12720 PF03477 ATP cone domain M0D43_12720 PF00317 Ribonucleotide reductase, all-alpha domain M0D43_12725 PF00268 Ribonucleotide reductase, small chain M0D43_12755 PF03061 Thioesterase superfamily M0D43_12770 PF08546 Ketopantoate reductase PanE/ApbA C terminal M0D43_12770 PF02558 Ketopantoate reductase PanE/ApbA M0D43_12775 PF01061 ABC-2 type transporter M0D43_12780 PF00005 ABC transporter M0D43_12785 PF01383 CpcD/allophycocyanin linker domain M0D43_12785 PF00175 Oxidoreductase NAD-binding domain M0D43_12790 PF01545 Cation efflux family M0D43_12795 PF02583 Metal-sensitive transcriptional repressor M0D43_12805 PF01381 Helix-turn-helix M0D43_12815 PF00005 ABC transporter M0D43_12830 PF04820 Tryptophan halogenase M0D43_12850 PF02798 Glutathione S-transferase, N-terminal domain M0D43_12850 PF00043 Glutathione S-transferase, C-terminal domain M0D43_12855 PF00326 Prolyl oligopeptidase family M0D43_12855 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region M0D43_12880 PF00490 Delta-aminolevulinic acid dehydratase M0D43_12910 PF00258 Flavodoxin M0D43_12910 PF00175 Oxidoreductase NAD-binding domain M0D43_12910 PF00667 FAD binding domain M0D43_12930 PF01488 Shikimate / quinate 5-dehydrogenase M0D43_12930 PF18317 Shikimate 5'-dehydrogenase C-terminal domain M0D43_12930 PF08501 Shikimate dehydrogenase substrate binding domain M0D43_12945 PF06733 DEAD_2 M0D43_12945 PF13307 Helicase C-terminal domain M0D43_12950 PF00199 Catalase M0D43_12950 PF06628 Catalase-related immune-responsive M0D43_12975 PF01207 Dihydrouridine synthase (Dus) M0D43_12985 PF00072 Response regulator receiver domain M0D43_12985 PF00486 Transcriptional regulatory protein, C terminal M0D43_12990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_13005 PF06167 Glucose-regulated metallo-peptidase M90 M0D43_13015 PF02237 Biotin protein ligase C terminal domain M0D43_13015 PF08279 HTH domain M0D43_13015 PF03099 Biotin/lipoate A/B protein ligase family M0D43_13020 PF03309 Type III pantothenate kinase M0D43_13035 PF02223 Thymidylate kinase M0D43_13060 PF00491 Arginase family M0D43_13075 PF05532 CsbD-like M0D43_13080 PF00579 tRNA synthetases class I (W and Y) M0D43_13105 PF00892 EamA-like transporter family M0D43_13110 PF00892 EamA-like transporter family M0D43_13130 PF00005 ABC transporter M0D43_13135 PF13533 Biotin-lipoyl like M0D43_13140 PF07730 Histidine kinase M0D43_13145 PF00196 Bacterial regulatory proteins, luxR family M0D43_13145 PF00072 Response regulator receiver domain M0D43_13160 PF00199 Catalase M0D43_13165 PF00883 Cytosol aminopeptidase family, catalytic domain M0D43_13165 PF02789 Cytosol aminopeptidase family, N-terminal domain M0D43_13170 PF13419 Haloacid dehalogenase-like hydrolase M0D43_13175 PF01594 AI-2E family transporter M0D43_13195 PF00595 PDZ domain M0D43_13205 PF08338 Domain of unknown function (DUF1731) M0D43_13205 PF01370 NAD dependent epimerase/dehydratase family M0D43_13240 PF01139 tRNA-splicing ligase RtcB M0D43_13255 PF00440 Bacterial regulatory proteins, tetR family M0D43_13260 PF00970 Oxidoreductase FAD-binding domain M0D43_13260 PF00111 2Fe-2S iron-sulfur cluster binding domain M0D43_13260 PF00175 Oxidoreductase NAD-binding domain M0D43_13265 PF00487 Fatty acid desaturase M0D43_13270 PF00563 EAL domain M0D43_13270 PF12792 CSS motif domain associated with EAL M0D43_13285 PF13335 Magnesium chelatase, subunit ChlI C-terminal M0D43_13285 PF01078 Magnesium chelatase, subunit ChlI M0D43_13290 PF04380 Membrane fusogenic activity M0D43_13295 PF00543 Nitrogen regulatory protein P-II M0D43_13300 PF02838 Glycosyl hydrolase family 20, domain 2 M0D43_13300 PF00041 Fibronectin type III domain M0D43_13300 PF00754 F5/8 type C domain M0D43_13300 PF00963 Cohesin domain M0D43_13300 PF07555 beta-N-acetylglucosaminidase M0D43_13320 PF17284 Spermidine synthase tetramerisation domain M0D43_13325 PF17810 Arginine decarboxylase helical bundle domain M0D43_13325 PF17944 Arginine decarboxylase C-terminal helical extension M0D43_13325 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain M0D43_13330 PF00975 Thioesterase domain M0D43_13330 PF00668 Condensation domain M0D43_13330 PF00550 Phosphopantetheine attachment site M0D43_13330 PF00501 AMP-binding enzyme M0D43_13330 PF13193 AMP-binding enzyme C-terminal domain M0D43_13335 PF03033 Glycosyltransferase family 28 N-terminal domain M0D43_13340 PF01757 Acyltransferase family M0D43_13345 PF00106 short chain dehydrogenase M0D43_13360 PF03485 Arginyl tRNA synthetase N terminal domain M0D43_13360 PF05746 DALR anticodon binding domain M0D43_13360 PF00750 tRNA synthetases class I (R) M0D43_13365 PF04002 RadC-like JAB domain M0D43_13370 PF02441 Flavoprotein M0D43_13370 PF04127 DNA / pantothenate metabolism flavoprotein M0D43_13375 PF00692 dUTPase M0D43_13380 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M0D43_13380 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M0D43_13380 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M0D43_13380 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M0D43_13395 PF00535 Glycosyl transferase family 2 M0D43_13400 PF01370 NAD dependent epimerase/dehydratase family M0D43_13410 PF02195 ParB-like nuclease domain M0D43_13410 PF17762 HTH domain found in ParB protein M0D43_13415 PF13614 AAA domain M0D43_13425 PF00156 Phosphoribosyl transferase domain M0D43_13430 PF03372 Endonuclease/Exonuclease/phosphatase family M0D43_13435 PF07690 Major Facilitator Superfamily M0D43_13445 PF03702 Anhydro-N-acetylmuramic acid kinase M0D43_13450 PF01551 Peptidase family M23 M0D43_13450 PF04225 Opacity-associated protein A LysM-like domain M0D43_13455 PF00579 tRNA synthetases class I (W and Y) M0D43_13485 PF18327 Proline utilization A proline dehydrogenase N-terminal domain M0D43_13485 PF14850 DNA-binding domain of Proline dehydrogenase M0D43_13485 PF01619 Proline dehydrogenase M0D43_13485 PF00171 Aldehyde dehydrogenase family M0D43_13495 PF02790 Cytochrome C oxidase subunit II, transmembrane domain M0D43_13495 PF00116 Cytochrome C oxidase subunit II, periplasmic domain M0D43_13500 PF00115 Cytochrome C and Quinol oxidase polypeptide I M0D43_13510 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 M0D43_13515 PF00510 Cytochrome c oxidase subunit III M0D43_13540 PF01040 UbiA prenyltransferase family M0D43_13550 PF13593 SBF-like CPA transporter family (DUF4137) M0D43_13560 PF10410 DnaB-helicase binding domain of primase M0D43_13560 PF08278 DNA primase DnaG DnaB-binding M0D43_13560 PF08275 DNA primase catalytic core, N-terminal domain M0D43_13560 PF01807 CHC2 zinc finger M0D43_13565 PF03631 Virulence factor BrkB M0D43_13575 PF09424 Yqey-like protein M0D43_13580 PF01165 Ribosomal protein S21 M0D43_13585 PF00814 Glycoprotease family M0D43_13590 PF02152 Dihydroneopterin aldolase M0D43_13595 PF00933 Glycosyl hydrolase family 3 N terminal domain M0D43_13595 PF14310 Fibronectin type III-like domain M0D43_13595 PF01915 Glycosyl hydrolase family 3 C-terminal domain M0D43_13600 PF07995 Glucose / Sorbosone dehydrogenase M0D43_13605 PF05360 yiaA/B two helix domain M0D43_13620 PF13520 Amino acid permease M0D43_13630 PF13378 Enolase C-terminal domain-like M0D43_13630 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M0D43_13640 PF01510 N-acetylmuramoyl-L-alanine amidase M0D43_13645 PF01427 D-ala-D-ala dipeptidase M0D43_13680 PF07063 Domain of unknown function (DUF1338) M0D43_13695 PF00873 AcrB/AcrD/AcrF family M0D43_13700 PF00873 AcrB/AcrD/AcrF family M0D43_13705 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M0D43_13710 PF01546 Peptidase family M20/M25/M40 M0D43_13710 PF07687 Peptidase dimerisation domain M0D43_13715 PF14489 QueF-like protein M0D43_13715 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term M0D43_13720 PF04972 BON domain M0D43_13720 PF01476 LysM domain M0D43_13730 PF03971 Monomeric isocitrate dehydrogenase M0D43_13740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D43_13740 PF03466 LysR substrate binding domain M0D43_13745 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) M0D43_13755 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M0D43_13755 PF07498 Rho termination factor, N-terminal domain M0D43_13755 PF07497 Rho termination factor, RNA-binding domain M0D43_13760 PF00085 Thioredoxin M0D43_13765 PF12300 ATP-dependent RNA helicase RhlB M0D43_13765 PF00271 Helicase conserved C-terminal domain M0D43_13765 PF00270 DEAD/DEAH box helicase M0D43_13770 PF00005 ABC transporter M0D43_13775 PF18075 FtsX extracellular domain M0D43_13780 PF01339 CheB methylesterase M0D43_13780 PF00072 Response regulator receiver domain M0D43_13785 PF03167 Uracil DNA glycosylase superfamily M0D43_13790 PF04542 Sigma-70 region 2 M0D43_13790 PF04545 Sigma-70, region 4 M0D43_13795 PF03458 UPF0126 domain M0D43_13800 PF07992 Pyridine nucleotide-disulphide oxidoreductase M0D43_13815 PF13417 Glutathione S-transferase, N-terminal domain M0D43_13815 PF00043 Glutathione S-transferase, C-terminal domain M0D43_13820 PF00271 Helicase conserved C-terminal domain M0D43_13820 PF00270 DEAD/DEAH box helicase M0D43_13820 PF18319 PriA DNA helicase Cys-rich region (CRR) domain M0D43_13820 PF17764 3′ DNA-binding domain (3′BD) M0D43_13820 PF18074 Primosomal protein N C-terminal domain M0D43_13840 PF01554 MatE M0D43_13845 PF01343 Peptidase family S49 M0D43_13870 PF01300 Telomere recombination M0D43_13875 PF01131 DNA topoisomerase M0D43_13875 PF13368 Topoisomerase C-terminal repeat M0D43_13875 PF01751 Toprim domain M0D43_13885 PF00114 Pilin (bacterial filament) M0D43_13885 PF07963 Prokaryotic N-terminal methylation motif M0D43_13890 PF04361 Protein of unknown function (DUF494) M0D43_13895 PF17782 DprA winged helix domain M0D43_13895 PF02481 DNA recombination-mediator protein A M0D43_13900 PF01476 LysM domain M0D43_13905 PF01327 Polypeptide deformylase M0D43_13910 PF02911 Formyl transferase, C-terminal domain M0D43_13910 PF00551 Formyl transferase M0D43_13915 PF01029 NusB family M0D43_13915 PF01189 16S rRNA methyltransferase RsmB/F M0D43_13930 PF00535 Glycosyl transferase family 2 M0D43_13950 PF00925 GTP cyclohydrolase II M0D43_13960 PF03279 Bacterial lipid A biosynthesis acyltransferase M0D43_13965 PF02580 D-Tyr-tRNA(Tyr) deacylase M0D43_13970 PF04539 Sigma-70 region 3 M0D43_13970 PF04545 Sigma-70, region 4 M0D43_13970 PF00140 Sigma-70 factor, region 1.2 M0D43_13970 PF03979 Sigma-70 factor, region 1.1 M0D43_13970 PF04542 Sigma-70 region 2 M0D43_13970 PF04546 Sigma-70, non-essential region M0D43_14065 PF02630 SCO1/SenC M0D43_14080 PF00557 Metallopeptidase family M24 M0D43_14090 PF00654 Voltage gated chloride channel M0D43_14125 PF01042 Endoribonuclease L-PSP M0D43_14130 PF03466 LysR substrate binding domain M0D43_14130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D43_14140 PF00005 ABC transporter M0D43_14155 PF07715 TonB-dependent Receptor Plug Domain M0D43_14155 PF00593 TonB dependent receptor M0D43_14200 PF08240 Alcohol dehydrogenase GroES-like domain M0D43_14200 PF13823 Alcohol dehydrogenase GroES-associated M0D43_14200 PF00107 Zinc-binding dehydrogenase M0D43_14225 PF02322 Cytochrome bd terminal oxidase subunit II M0D43_14230 PF01654 Cytochrome bd terminal oxidase subunit I M0D43_14235 PF00158 Sigma-54 interaction domain M0D43_14235 PF02954 Bacterial regulatory protein, Fis family M0D43_14235 PF00072 Response regulator receiver domain M0D43_14245 PF05067 Manganese containing catalase M0D43_14250 PF05974 Domain of unknown function (DUF892) M0D43_14265 PF06580 Histidine kinase M0D43_14265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_14265 PF00672 HAMP domain M0D43_14265 PF02743 Cache domain M0D43_14270 PF00072 Response regulator receiver domain M0D43_14270 PF04397 LytTr DNA-binding domain M0D43_14280 PF13520 Amino acid permease M0D43_14295 PF01431 Peptidase family M13 M0D43_14295 PF05649 Peptidase family M13 M0D43_14305 PF00248 Aldo/keto reductase family M0D43_14310 PF03358 NADPH-dependent FMN reductase M0D43_14315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D43_14315 PF03466 LysR substrate binding domain M0D43_14325 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase M0D43_14335 PF03167 Uracil DNA glycosylase superfamily M0D43_14340 PF02469 Fasciclin domain M0D43_14350 PF00999 Sodium/hydrogen exchanger family M0D43_14355 PF00005 ABC transporter M0D43_14360 PF01061 ABC-2 type transporter M0D43_14375 PF09286 Pro-kumamolisin, activation domain M0D43_14375 PF04151 Bacterial pre-peptidase C-terminal domain M0D43_14385 PF00082 Subtilase family M0D43_14385 PF04151 Bacterial pre-peptidase C-terminal domain M0D43_14390 PF05662 Coiled stalk of trimeric autotransporter adhesin M0D43_14390 PF05658 Head domain of trimeric autotransporter adhesin M0D43_14390 PF03895 YadA-like membrane anchor domain M0D43_14390 PF13018 Extended Signal Peptide of Type V secretion system M0D43_14395 PF00512 His Kinase A (phospho-acceptor) domain M0D43_14395 PF08448 PAS fold M0D43_14395 PF13188 PAS domain M0D43_14395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_14395 PF00072 Response regulator receiver domain M0D43_14400 PF00072 Response regulator receiver domain M0D43_14400 PF00486 Transcriptional regulatory protein, C terminal M0D43_14415 PF13677 Membrane MotB of proton-channel complex MotA/MotB M0D43_14415 PF00691 OmpA family M0D43_14420 PF01618 MotA/TolQ/ExbB proton channel family M0D43_14430 PF01641 SelR domain M0D43_14440 PF01037 Lrp/AsnC ligand binding domain M0D43_14445 PF01266 FAD dependent oxidoreductase M0D43_14450 PF00842 Alanine racemase, C-terminal domain M0D43_14450 PF01168 Alanine racemase, N-terminal domain M0D43_14470 PF00989 PAS fold M0D43_14470 PF00512 His Kinase A (phospho-acceptor) domain M0D43_14470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_14480 PF07995 Glucose / Sorbosone dehydrogenase M0D43_14490 PF05175 Methyltransferase small domain M0D43_14490 PF08468 Methyltransferase small domain N-terminal M0D43_14495 PF00849 RNA pseudouridylate synthase M0D43_14495 PF01479 S4 domain M0D43_14500 PF13419 Haloacid dehalogenase-like hydrolase M0D43_14520 PF00512 His Kinase A (phospho-acceptor) domain M0D43_14520 PF01627 Hpt domain M0D43_14520 PF00072 Response regulator receiver domain M0D43_14520 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M0D43_14520 PF00672 HAMP domain M0D43_14520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_14530 PF04461 Protein of unknown function (DUF520) M0D43_14535 PF00892 EamA-like transporter family M0D43_14540 PF09383 NIL domain M0D43_14540 PF00005 ABC transporter M0D43_14545 PF00528 Binding-protein-dependent transport system inner membrane component M0D43_14550 PF03180 NLPA lipoprotein M0D43_14585 PF00364 Biotin-requiring enzyme M0D43_14585 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M0D43_14585 PF02817 e3 binding domain M0D43_14595 PF07992 Pyridine nucleotide-disulphide oxidoreductase M0D43_14595 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M0D43_14620 PF00119 ATP synthase A chain M0D43_14625 PF00137 ATP synthase subunit C M0D43_14630 PF00430 ATP synthase B/B' CF(0) M0D43_14635 PF00213 ATP synthase delta (OSCP) subunit M0D43_14640 PF02874 ATP synthase alpha/beta family, beta-barrel domain M0D43_14640 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M0D43_14640 PF00306 ATP synthase alpha/beta chain, C terminal domain M0D43_14645 PF00231 ATP synthase M0D43_14650 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M0D43_14650 PF02874 ATP synthase alpha/beta family, beta-barrel domain M0D43_14655 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain M0D43_14670 PF14602 Hexapeptide repeat of succinyl-transferase M0D43_14670 PF00132 Bacterial transferase hexapeptide (six repeats) M0D43_14670 PF12804 MobA-like NTP transferase domain M0D43_14680 PF00672 HAMP domain M0D43_14680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_14680 PF00512 His Kinase A (phospho-acceptor) domain M0D43_14685 PF02954 Bacterial regulatory protein, Fis family M0D43_14685 PF00072 Response regulator receiver domain M0D43_14685 PF00158 Sigma-54 interaction domain M0D43_14690 PF00005 ABC transporter M0D43_14690 PF02687 FtsX-like permease family M0D43_14690 PF12704 MacB-like periplasmic core domain M0D43_14695 PF12704 MacB-like periplasmic core domain M0D43_14695 PF00005 ABC transporter M0D43_14695 PF02687 FtsX-like permease family M0D43_14700 PF00005 ABC transporter M0D43_14700 PF02687 FtsX-like permease family M0D43_14700 PF12704 MacB-like periplasmic core domain M0D43_14705 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M0D43_14710 PF01380 SIS domain M0D43_14735 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M0D43_14740 PF05275 Copper resistance protein B precursor (CopB) M0D43_14745 PF00394 Multicopper oxidase M0D43_14745 PF07731 Multicopper oxidase M0D43_14745 PF07732 Multicopper oxidase M0D43_14760 PF01432 Peptidase family M3 M0D43_14770 PF00109 Beta-ketoacyl synthase, N-terminal domain M0D43_14770 PF02801 Beta-ketoacyl synthase, C-terminal domain M0D43_14775 PF07977 FabA-like domain M0D43_14785 PF00817 impB/mucB/samB family M0D43_14785 PF11799 impB/mucB/samB family C-terminal domain M0D43_14790 PF13419 Haloacid dehalogenase-like hydrolase M0D43_14800 PF13185 GAF domain M0D43_14815 PF01242 6-pyruvoyl tetrahydropterin synthase M0D43_14820 PF00270 DEAD/DEAH box helicase M0D43_14820 PF00271 Helicase conserved C-terminal domain M0D43_14830 PF14497 Glutathione S-transferase, C-terminal domain M0D43_14830 PF02798 Glutathione S-transferase, N-terminal domain M0D43_14835 PF00437 Type II/IV secretion system protein M0D43_14855 PF00291 Pyridoxal-phosphate dependent enzyme M0D43_14855 PF00571 CBS domain M0D43_14860 PF01053 Cys/Met metabolism PLP-dependent enzyme M0D43_14870 PF00005 ABC transporter M0D43_14875 PF00132 Bacterial transferase hexapeptide (six repeats) M0D43_14880 PF00535 Glycosyl transferase family 2 M0D43_14885 PF14307 Glycosyltransferase WbsX M0D43_14885 PF05045 Rhamnan synthesis protein F M0D43_14895 PF01209 ubiE/COQ5 methyltransferase family M0D43_14910 PF07992 Pyridine nucleotide-disulphide oxidoreductase M0D43_14910 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M0D43_14915 PF01370 NAD dependent epimerase/dehydratase family M0D43_14930 PF00106 short chain dehydrogenase M0D43_14935 PF04030 D-arabinono-1,4-lactone oxidase M0D43_14935 PF01565 FAD binding domain M0D43_14940 PF01040 UbiA prenyltransferase family M0D43_14950 PF01012 Electron transfer flavoprotein domain M0D43_14950 PF00766 Electron transfer flavoprotein FAD-binding domain M0D43_14955 PF01012 Electron transfer flavoprotein domain M0D43_14960 PF16363 GDP-mannose 4,6 dehydratase M0D43_14965 PF00483 Nucleotidyl transferase M0D43_14970 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase M0D43_14975 PF04321 RmlD substrate binding domain M0D43_14980 PF01050 Mannose-6-phosphate isomerase M0D43_14980 PF00483 Nucleotidyl transferase M0D43_14985 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M0D43_14985 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M0D43_14985 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M0D43_14985 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M0D43_14990 PF01144 Coenzyme A transferase M0D43_14995 PF01144 Coenzyme A transferase M0D43_15000 PF05045 Rhamnan synthesis protein F M0D43_15000 PF14307 Glycosyltransferase WbsX M0D43_15020 PF03886 ABC-type transport auxiliary lipoprotein component M0D43_15020 PF02470 MlaD protein M0D43_15025 PF00005 ABC transporter M0D43_15030 PF02405 Permease MlaE M0D43_15040 PF00816 H-NS histone family M0D43_15045 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M0D43_15045 PF03129 Anticodon binding domain M0D43_15045 PF04073 Aminoacyl-tRNA editing domain M0D43_15055 PF01066 CDP-alcohol phosphatidyltransferase M0D43_15070 PF00544 Pectate lyase M0D43_15075 PF00732 GMC oxidoreductase M0D43_15075 PF05199 GMC oxidoreductase M0D43_15080 PF00171 Aldehyde dehydrogenase family M0D43_15085 PF02028 BCCT, betaine/carnitine/choline family transporter M0D43_15095 PF01323 DSBA-like thioredoxin domain M0D43_15105 PF00034 Cytochrome c M0D43_15110 PF01926 50S ribosome-binding GTPase M0D43_15115 PF04107 Glutamate-cysteine ligase family 2(GCS2) M0D43_15120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_15120 PF00672 HAMP domain M0D43_15120 PF00512 His Kinase A (phospho-acceptor) domain M0D43_15125 PF00486 Transcriptional regulatory protein, C terminal M0D43_15125 PF00072 Response regulator receiver domain M0D43_15135 PF02583 Metal-sensitive transcriptional repressor M0D43_15140 PF00107 Zinc-binding dehydrogenase M0D43_15140 PF08240 Alcohol dehydrogenase GroES-like domain M0D43_15145 PF04828 Glutathione-dependent formaldehyde-activating enzyme M0D43_15150 PF00756 Putative esterase M0D43_15170 PF00155 Aminotransferase class I and II M0D43_15170 PF00392 Bacterial regulatory proteins, gntR family M0D43_15175 PF00892 EamA-like transporter family M0D43_15185 PF02645 Uncharacterised protein, DegV family COG1307 M0D43_15220 PF01979 Amidohydrolase family M0D43_15225 PF01979 Amidohydrolase family M0D43_15240 PF00462 Glutaredoxin M0D43_15245 PF01522 Polysaccharide deacetylase M0D43_15260 PF00155 Aminotransferase class I and II M0D43_15265 PF03193 RsgA GTPase M0D43_15285 PF00128 Alpha amylase, catalytic domain M0D43_15300 PF00356 Bacterial regulatory proteins, lacI family M0D43_15305 PF00106 short chain dehydrogenase M0D43_15310 PF03600 Citrate transporter M0D43_15320 PF00072 Response regulator receiver domain M0D43_15320 PF00486 Transcriptional regulatory protein, C terminal M0D43_15325 PF00512 His Kinase A (phospho-acceptor) domain M0D43_15325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_15325 PF08521 Two-component sensor kinase N-terminal M0D43_15335 PF00196 Bacterial regulatory proteins, luxR family M0D43_15335 PF00072 Response regulator receiver domain M0D43_15355 PF00248 Aldo/keto reductase family M0D43_15360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D43_15360 PF03466 LysR substrate binding domain M0D43_15370 PF07690 Major Facilitator Superfamily M0D43_15375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_15375 PF00512 His Kinase A (phospho-acceptor) domain M0D43_15390 PF00375 Sodium:dicarboxylate symporter family M0D43_15395 PF01515 Phosphate acetyl/butaryl transferase M0D43_15395 PF03949 Malic enzyme, NAD binding domain M0D43_15395 PF00390 Malic enzyme, N-terminal domain M0D43_15470 PF01515 Phosphate acetyl/butaryl transferase M0D43_15470 PF03949 Malic enzyme, NAD binding domain M0D43_15470 PF00390 Malic enzyme, N-terminal domain M0D43_15505 PF13276 HTH-like domain M0D43_15505 PF00665 Integrase core domain M0D43_15505 PF13333 Integrase core domain M0D43_15510 PF01527 Transposase M0D43_15540 PF03412 Peptidase C39 family M0D43_15540 PF00005 ABC transporter M0D43_15540 PF00664 ABC transporter transmembrane region M0D43_15565 PF03279 Bacterial lipid A biosynthesis acyltransferase M0D43_15570 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) M0D43_15575 PF02321 Outer membrane efflux protein M0D43_15590 PF00990 Diguanylate cyclase, GGDEF domain M0D43_15595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D43_15600 PF00330 Aconitase family (aconitate hydratase) M0D43_15605 PF00694 Aconitase C-terminal domain M0D43_15615 PF00180 Isocitrate/isopropylmalate dehydrogenase M0D43_15620 PF00682 HMGL-like M0D43_15620 PF08502 LeuA allosteric (dimerisation) domain M0D43_15625 PF00291 Pyridoxal-phosphate dependent enzyme M0D43_15635 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M0D43_15635 PF00205 Thiamine pyrophosphate enzyme, central domain M0D43_15635 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M0D43_15640 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain M0D43_15640 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain M0D43_15650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D43_15650 PF00672 HAMP domain M0D43_15655 PF00326 Prolyl oligopeptidase family M0D43_15655 PF07676 WD40-like Beta Propeller Repeat M0D43_15660 PF13667 ThiC-associated domain M0D43_15660 PF01964 Radical SAM ThiC family M0D43_15665 PF00486 Transcriptional regulatory protein, C terminal M0D43_15665 PF18500 CadC C-terminal domain 1 M0D43_15670 PF12833 Helix-turn-helix domain M0D43_15675 PF07715 TonB-dependent Receptor Plug Domain M0D43_15675 PF00593 TonB dependent receptor M0D43_15685 PF00719 Inorganic pyrophosphatase M0D43_15695 PF03030 Inorganic H+ pyrophosphatase M0D43_15720 PF04610 TrbL/VirB6 plasmid conjugal transfer protein M0D43_15740 PF04610 TrbL/VirB6 plasmid conjugal transfer protein M0D43_15750 PF00365 Phosphofructokinase M0D43_15760 PF01225 Mur ligase family, catalytic domain M0D43_15760 PF02875 Mur ligase family, glutamate ligase domain M0D43_15760 PF08245 Mur ligase middle domain M0D43_15770 PF01062 Bestrophin, RFP-TM, chloride channel M0D43_15775 PF01569 PAP2 superfamily M0D43_15800 PF00202 Aminotransferase class-III M0D43_15815 PF01593 Flavin containing amine oxidoreductase M0D43_15820 PF13442 Cytochrome C oxidase, cbb3-type, subunit III M0D43_15820 PF00034 Cytochrome c M0D43_15830 PF00155 Aminotransferase class I and II M0D43_15835 PF00127 Copper binding proteins, plastocyanin/azurin family M0D43_15845 PF00196 Bacterial regulatory proteins, luxR family M0D43_15845 PF17874 MalT-like TPR region M0D43_15850 PF00202 Aminotransferase class-III M0D43_15865 PF02581 Thiamine monophosphate synthase M0D43_15870 PF00301 Rubredoxin M0D43_15875 PF13369 Transglutaminase-like superfamily M0D43_15885 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) M0D43_15895 PF01812 5-formyltetrahydrofolate cyclo-ligase family M0D43_15905 PF05164 Cell division protein ZapA M0D43_15915 PF03695 Uncharacterised protein family (UPF0149) M0D43_15920 PF05195 Aminopeptidase P, N-terminal domain M0D43_15920 PF00557 Metallopeptidase family M24 M0D43_15930 PF00557 Metallopeptidase family M24 M0D43_15945 PF06969 HemN C-terminal domain M0D43_15945 PF04055 Radical SAM superfamily M0D43_15950 PF01725 Ham1 family M0D43_15960 PF01138 3' exoribonuclease family, domain 1 M0D43_15960 PF03725 3' exoribonuclease family, domain 2 M0D43_15965 PF08340 Domain of unknown function (DUF1732) M0D43_15965 PF03755 YicC-like family, N-terminal region M0D43_15970 PF00625 Guanylate kinase M0D43_15975 PF01192 RNA polymerase Rpb6 M0D43_15990 PF00005 ABC transporter M0D43_15990 PF08402 TOBE domain M0D43_15995 PF00528 Binding-protein-dependent transport system inner membrane component M0D43_16000 PF00528 Binding-protein-dependent transport system inner membrane component M0D43_16005 PF04966 Carbohydrate-selective porin, OprB family M0D43_16015 PF04198 Putative sugar-binding domain M0D43_16020 PF13419 Haloacid dehalogenase-like hydrolase M0D43_16025 PF13291 ACT domain M0D43_16025 PF02824 TGS domain M0D43_16025 PF04607 Region found in RelA / SpoT proteins M0D43_16030 PF03466 LysR substrate binding domain M0D43_16030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D43_16035 PF00701 Dihydrodipicolinate synthetase family M0D43_16040 PF00171 Aldehyde dehydrogenase family M0D43_16045 PF07690 Major Facilitator Superfamily M0D43_16050 PF13378 Enolase C-terminal domain-like M0D43_16050 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M0D43_16055 PF03573 outer membrane porin, OprD family M0D43_16060 PF08666 SAF domain M0D43_16060 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus M0D43_16065 PF01042 Endoribonuclease L-PSP M0D43_16070 PF17191 RecG wedge domain M0D43_16070 PF00271 Helicase conserved C-terminal domain M0D43_16070 PF00270 DEAD/DEAH box helicase M0D43_16075 PF01156 Inosine-uridine preferring nucleoside hydrolase M0D43_16080 PF01197 Ribosomal protein L31 M0D43_16085 PF00285 Citrate synthase, C-terminal domain M0D43_16100 PF00912 Transglycosylase M0D43_16100 PF17092 Penicillin-binding protein OB-like domain M0D43_16100 PF00905 Penicillin binding protein transpeptidase domain M0D43_16105 PF11104 Type IV pilus assembly protein PilM; M0D43_16110 PF05137 Fimbrial assembly protein (PilN) M0D43_16115 PF04350 Pilus assembly protein, PilO M0D43_16120 PF04351 Pilus assembly protein, PilP M0D43_16125 PF11741 AMIN domain M0D43_16125 PF00263 Bacterial type II and III secretion system protein M0D43_16125 PF03958 Bacterial type II/III secretion system short domain M0D43_16125 PF07660 Secretin and TonB N terminus short domain M0D43_16130 PF17863 AAA lid domain M0D43_16130 PF07726 ATPase family associated with various cellular activities (AAA) M0D43_16150 PF07584 Aerotolerance regulator N-terminal M0D43_16150 PF00092 von Willebrand factor type A domain M0D43_16160 PF00375 Sodium:dicarboxylate symporter family M0D43_16165 PF00456 Transketolase, thiamine diphosphate binding domain M0D43_16165 PF02780 Transketolase, C-terminal domain M0D43_16165 PF02779 Transketolase, pyrimidine binding domain M0D43_16170 PF07715 TonB-dependent Receptor Plug Domain M0D43_16170 PF00593 TonB dependent receptor M0D43_16175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D43_16175 PF03466 LysR substrate binding domain M0D43_16185 PF04225 Opacity-associated protein A LysM-like domain M0D43_16185 PF01551 Peptidase family M23 M0D43_16190 PF03734 L,D-transpeptidase catalytic domain M0D43_16190 PF01476 LysM domain M0D43_16215 PF00501 AMP-binding enzyme M0D43_16235 PF00072 Response regulator receiver domain M0D43_16235 PF00486 Transcriptional regulatory protein, C terminal M0D43_16240 PF08521 Two-component sensor kinase N-terminal M0D43_16240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_16240 PF00512 His Kinase A (phospho-acceptor) domain M0D43_16260 PF03459 TOBE domain M0D43_16260 PF00005 ABC transporter M0D43_16265 PF00528 Binding-protein-dependent transport system inner membrane component M0D43_16275 PF00753 Metallo-beta-lactamase superfamily M0D43_16275 PF04273 Putative phosphatase (DUF442) M0D43_16285 PF03922 OmpW family M0D43_16295 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M0D43_16295 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M0D43_16315 PF00162 Phosphoglycerate kinase M0D43_16320 PF13419 Haloacid dehalogenase-like hydrolase M0D43_16325 PF00224 Pyruvate kinase, barrel domain M0D43_16325 PF02887 Pyruvate kinase, alpha/beta domain M0D43_16330 PF00274 Fructose-bisphosphate aldolase class-I M0D43_16335 PF01661 Macro domain M0D43_16350 PF00291 Pyridoxal-phosphate dependent enzyme M0D43_16355 PF10414 Sirohaem synthase dimerisation region M0D43_16355 PF14824 Sirohaem biosynthesis protein central M0D43_16355 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M0D43_16360 PF03466 LysR substrate binding domain M0D43_16360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D43_16375 PF00512 His Kinase A (phospho-acceptor) domain M0D43_16375 PF00672 HAMP domain M0D43_16375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_16375 PF01627 Hpt domain M0D43_16375 PF00072 Response regulator receiver domain M0D43_16395 PF01507 Phosphoadenosine phosphosulfate reductase family M0D43_16400 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M0D43_16400 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M0D43_16405 PF00667 FAD binding domain M0D43_16405 PF00175 Oxidoreductase NAD-binding domain M0D43_16405 PF00258 Flavodoxin M0D43_16410 PF01507 Phosphoadenosine phosphosulfate reductase family M0D43_16415 PF00009 Elongation factor Tu GTP binding domain M0D43_16420 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M0D43_16420 PF00529 HlyD membrane-fusion protein of T1SS M0D43_16425 PF00873 AcrB/AcrD/AcrF family M0D43_16440 PF01433 Peptidase family M1 domain M0D43_16440 PF11838 ERAP1-like C-terminal domain M0D43_16450 PF00588 SpoU rRNA Methylase family M0D43_16450 PF08032 RNA 2'-O ribose methyltransferase substrate binding M0D43_16455 PF00135 Carboxylesterase family M0D43_16460 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation M0D43_16460 PF14508 Glycosyl-hydrolase 97 N-terminal M0D43_16460 PF10566 Glycoside hydrolase 97 M0D43_16465 PF13287 Fn3 associated M0D43_16465 PF02837 Glycosyl hydrolases family 2, sugar binding domain M0D43_16465 PF02836 Glycosyl hydrolases family 2, TIM barrel domain M0D43_16465 PF00703 Glycosyl hydrolases family 2 M0D43_16465 PF16355 Domain of unknown function (DUF4982) M0D43_16485 PF00356 Bacterial regulatory proteins, lacI family M0D43_16495 PF01741 Large-conductance mechanosensitive channel, MscL M0D43_16500 PF01557 Fumarylacetoacetate (FAA) hydrolase family M0D43_16515 PF02080 TrkA-C domain M0D43_16515 PF03600 Citrate transporter M0D43_16520 PF02390 Putative methyltransferase M0D43_16525 PF05690 Thiazole biosynthesis protein ThiG M0D43_16535 PF03797 Autotransporter beta-domain M0D43_16535 PF00657 GDSL-like Lipase/Acylhydrolase M0D43_16565 PF00128 Alpha amylase, catalytic domain M0D43_16565 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) M0D43_16570 PF08443 RimK-like ATP-grasp domain M0D43_16570 PF18030 RimK PreATP-grasp domain M0D43_16580 PF00486 Transcriptional regulatory protein, C terminal M0D43_16580 PF00072 Response regulator receiver domain M0D43_16585 PF11808 Phosphate regulon sensor protein PhoR M0D43_16585 PF00989 PAS fold M0D43_16585 PF00512 His Kinase A (phospho-acceptor) domain M0D43_16585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_16635 PF01121 Dephospho-CoA kinase M0D43_16640 PF06750 Bacterial Peptidase A24 N-terminal domain M0D43_16640 PF01478 Type IV leader peptidase family M0D43_16645 PF00482 Type II secretion system (T2SS), protein F M0D43_16650 PF07963 Prokaryotic N-terminal methylation motif M0D43_16650 PF00114 Pilin (bacterial filament) M0D43_16655 PF08019 Phosphoethanolamine transferase EptA/EptB M0D43_16655 PF00884 Sulfatase M0D43_16670 PF00437 Type II/IV secretion system protein M0D43_16670 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M0D43_16675 PF00437 Type II/IV secretion system protein M0D43_16675 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M0D43_16680 PF02954 Bacterial regulatory protein, Fis family M0D43_16680 PF00072 Response regulator receiver domain M0D43_16680 PF00158 Sigma-54 interaction domain M0D43_16685 PF00512 His Kinase A (phospho-acceptor) domain M0D43_16685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_16690 PF00549 CoA-ligase M0D43_16690 PF08442 ATP-grasp domain M0D43_16695 PF02629 CoA binding domain M0D43_16695 PF00549 CoA-ligase M0D43_16705 PF00795 Carbon-nitrogen hydrolase M0D43_16705 PF02540 NAD synthase M0D43_16710 PF01230 HIT domain M0D43_16715 PF13525 Outer membrane lipoprotein M0D43_16720 PF00849 RNA pseudouridylate synthase M0D43_16725 PF02578 Multi-copper polyphenol oxidoreductase laccase M0D43_16735 PF04134 Protein of unknown function, DUF393 M0D43_16740 PF02203 Tar ligand binding domain homologue M0D43_16740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D43_16740 PF00672 HAMP domain M0D43_16745 PF01011 PQQ enzyme repeat M0D43_16750 PF00982 Glycosyltransferase family 20 M0D43_16755 PF00723 Glycosyl hydrolases family 15 M0D43_16760 PF02358 Trehalose-phosphatase M0D43_16765 PF07715 TonB-dependent Receptor Plug Domain M0D43_16765 PF00593 TonB dependent receptor M0D43_16780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D43_16780 PF03466 LysR substrate binding domain M0D43_16805 PF01541 GIY-YIG catalytic domain M0D43_16810 PF10431 C-terminal, D2-small domain, of ClpB protein M0D43_16810 PF02861 Clp amino terminal domain, pathogenicity island component M0D43_16810 PF07724 AAA domain (Cdc48 subfamily) M0D43_16810 PF00004 ATPase family associated with various cellular activities (AAA) M0D43_16810 PF17871 AAA lid domain M0D43_16825 PF00664 ABC transporter transmembrane region M0D43_16825 PF00005 ABC transporter M0D43_16825 PF03412 Peptidase C39 family M0D43_16845 PF07715 TonB-dependent Receptor Plug Domain M0D43_16845 PF00593 TonB dependent receptor M0D43_16865 PF12557 Cob(I)alamin adenosyltransferase N terminal M0D43_16865 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP M0D43_16870 PF03186 CobD/Cbib protein M0D43_16870 PF17113 Regulatory signalling modulator protein AmpE M0D43_16875 PF00155 Aminotransferase class I and II M0D43_16880 PF07685 CobB/CobQ-like glutamine amidotransferase domain M0D43_16880 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain M0D43_16885 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase M0D43_16890 PF02277 Phosphoribosyltransferase M0D43_16900 PF02654 Cobalamin-5-phosphate synthase M0D43_16920 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain M0D43_16920 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain M0D43_16925 PF06276 Ferric iron reductase FhuF-like transporter M0D43_16925 PF04183 IucA / IucC family M0D43_16930 PF07690 Major Facilitator Superfamily M0D43_16935 PF06276 Ferric iron reductase FhuF-like transporter M0D43_16935 PF04183 IucA / IucC family M0D43_16945 PF07715 TonB-dependent Receptor Plug Domain M0D43_16945 PF07660 Secretin and TonB N terminus short domain M0D43_16945 PF00593 TonB dependent receptor M0D43_16950 PF03328 HpcH/HpaI aldolase/citrate lyase family M0D43_16970 PF00999 Sodium/hydrogen exchanger family M0D43_16970 PF02254 TrkA-N domain M0D43_16980 PF07715 TonB-dependent Receptor Plug Domain M0D43_16980 PF00593 TonB dependent receptor M0D43_16985 PF00593 TonB dependent receptor M0D43_16985 PF07715 TonB-dependent Receptor Plug Domain M0D43_17000 PF07715 TonB-dependent Receptor Plug Domain M0D43_17000 PF00593 TonB dependent receptor M0D43_17005 PF00005 ABC transporter M0D43_17005 PF12848 ABC transporter M0D43_17015 PF03466 LysR substrate binding domain M0D43_17015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D43_17035 PF04185 Phosphoesterase family M0D43_17035 PF05506 Domain of unknown function (DUF756) M0D43_17045 PF07690 Major Facilitator Superfamily M0D43_17060 PF02938 GAD domain M0D43_17060 PF00152 tRNA synthetases class II (D, K and N) M0D43_17060 PF01336 OB-fold nucleic acid binding domain M0D43_17075 PF01709 Transcriptional regulator M0D43_17080 PF02075 Crossover junction endodeoxyribonuclease RuvC M0D43_17085 PF07499 RuvA, C-terminal domain M0D43_17085 PF01330 RuvA N terminal domain M0D43_17090 PF02705 K+ potassium transporter M0D43_17100 PF17864 RuvB AAA lid domain M0D43_17100 PF05491 RuvB C-terminal winged helix domain M0D43_17100 PF05496 Holliday junction DNA helicase RuvB P-loop domain M0D43_17105 PF03061 Thioesterase superfamily M0D43_17110 PF01618 MotA/TolQ/ExbB proton channel family M0D43_17115 PF02472 Biopolymer transport protein ExbD/TolR M0D43_17125 PF07676 WD40-like Beta Propeller Repeat M0D43_17125 PF04052 TolB amino-terminal domain M0D43_17130 PF00691 OmpA family M0D43_17140 PF04055 Radical SAM superfamily M0D43_17150 PF06508 Queuosine biosynthesis protein QueC M0D43_17165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D43_17165 PF03466 LysR substrate binding domain M0D43_17170 PF01810 LysE type translocator M0D43_17180 PF00672 HAMP domain M0D43_17180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D43_17180 PF02203 Tar ligand binding domain homologue M0D43_17190 PF01479 S4 domain M0D43_17190 PF00849 RNA pseudouridylate synthase M0D43_17210 PF09382 RQC domain M0D43_17210 PF00570 HRDC domain M0D43_17210 PF00271 Helicase conserved C-terminal domain M0D43_17210 PF00270 DEAD/DEAH box helicase M0D43_17210 PF16124 RecQ zinc-binding M0D43_17215 PF00210 Ferritin-like domain M0D43_17220 PF00270 DEAD/DEAH box helicase M0D43_17220 PF11898 Domain of unknown function (DUF3418) M0D43_17220 PF04408 Helicase associated domain (HA2) M0D43_17220 PF00271 Helicase conserved C-terminal domain M0D43_17220 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold M0D43_17250 PF04055 Radical SAM superfamily M0D43_17250 PF13186 Iron-sulfur cluster-binding domain M0D43_17255 PF05402 Coenzyme PQQ synthesis protein D (PqqD) M0D43_17260 PF03070 TENA/THI-4/PQQC family M0D43_17265 PF12706 Beta-lactamase superfamily domain M0D43_17270 PF08042 PqqA family M0D43_17275 PF02824 TGS domain M0D43_17275 PF13291 ACT domain M0D43_17275 PF04607 Region found in RelA / SpoT proteins M0D43_17285 PF00535 Glycosyl transferase family 2 M0D43_17290 PF00905 Penicillin binding protein transpeptidase domain M0D43_17290 PF14814 Bifunctional transglycosylase second domain M0D43_17290 PF00912 Transglycosylase M0D43_17300 PF04851 Type III restriction enzyme, res subunit M0D43_17300 PF13307 Helicase C-terminal domain M0D43_17305 PF00814 Glycoprotease family M0D43_17310 PF03747 ADP-ribosylglycohydrolase M0D43_17320 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain M0D43_17320 PF02951 Prokaryotic glutathione synthetase, N-terminal domain M0D43_17325 PF00072 Response regulator receiver domain M0D43_17330 PF00072 Response regulator receiver domain M0D43_17335 PF01584 CheW-like domain M0D43_17340 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term M0D43_17340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D43_17345 PF01584 CheW-like domain M0D43_17345 PF02895 Signal transducing histidine kinase, homodimeric domain M0D43_17345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_17345 PF01627 Hpt domain M0D43_17345 PF00072 Response regulator receiver domain M0D43_17360 PF13302 Acetyltransferase (GNAT) domain M0D43_17370 PF04542 Sigma-70 region 2 M0D43_17370 PF08281 Sigma-70, region 4 M0D43_17375 PF12450 von Willebrand factor M0D43_17375 PF12034 Domain of unknown function (DUF3520) M0D43_17375 PF00092 von Willebrand factor type A domain M0D43_17380 PF01112 Asparaginase M0D43_17385 PF03932 CutC family M0D43_17415 PF01301 Glycosyl hydrolases family 35 M0D43_17420 PF07971 Glycosyl hydrolase family 92 M0D43_17420 PF17678 Glycosyl hydrolase family 92 N-terminal domain M0D43_17430 PF02056 Family 4 glycosyl hydrolase M0D43_17430 PF11975 Family 4 glycosyl hydrolase C-terminal domain M0D43_17435 PF13520 Amino acid permease M0D43_17440 PF01301 Glycosyl hydrolases family 35 M0D43_17450 PF00933 Glycosyl hydrolase family 3 N terminal domain M0D43_17450 PF07691 PA14 domain M0D43_17450 PF01915 Glycosyl hydrolase family 3 C-terminal domain M0D43_17450 PF14310 Fibronectin type III-like domain M0D43_17460 PF02838 Glycosyl hydrolase family 20, domain 2 M0D43_17460 PF07691 PA14 domain M0D43_17460 PF00728 Glycosyl hydrolase family 20, catalytic domain M0D43_17470 PF00704 Glycosyl hydrolases family 18 M0D43_17470 PF01476 LysM domain M0D43_17485 PF02685 Glucokinase M0D43_17490 PF04452 RNA methyltransferase M0D43_17495 PF00202 Aminotransferase class-III M0D43_17500 PF00293 NUDIX domain M0D43_17505 PF00459 Inositol monophosphatase family M0D43_17510 PF03819 MazG nucleotide pyrophosphohydrolase domain M0D43_17515 PF02694 Uncharacterised BCR, YnfA/UPF0060 family M0D43_17520 PF16200 C-terminal region of band_7 M0D43_17520 PF01145 SPFH domain / Band 7 family M0D43_17530 PF01571 Aminomethyltransferase folate-binding domain M0D43_17530 PF08669 Glycine cleavage T-protein C-terminal barrel domain M0D43_17535 PF01597 Glycine cleavage H-protein M0D43_17560 PF09317 Domain of unknown function (DUF1974) M0D43_17560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M0D43_17560 PF02770 Acyl-CoA dehydrogenase, middle domain M0D43_17560 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M0D43_17565 PF00561 alpha/beta hydrolase fold M0D43_17570 PF00440 Bacterial regulatory proteins, tetR family M0D43_17575 PF00593 TonB dependent receptor M0D43_17575 PF07715 TonB-dependent Receptor Plug Domain M0D43_17585 PF01430 Hsp33 protein M0D43_17590 PF00912 Transglycosylase M0D43_17595 PF00535 Glycosyl transferase family 2 M0D43_17600 PF00571 CBS domain M0D43_17600 PF00478 IMP dehydrogenase / GMP reductase domain M0D43_17605 PF05170 AsmA family M0D43_17610 PF03006 Haemolysin-III related M0D43_17615 PF00009 Elongation factor Tu GTP binding domain M0D43_17615 PF16658 Class II release factor RF3, C-terminal domain M0D43_17620 PF01476 LysM domain M0D43_17620 PF01551 Peptidase family M23 M0D43_17620 PF08525 Opacity-associated protein A N-terminal motif M0D43_17625 PF00561 alpha/beta hydrolase fold M0D43_17630 PF01053 Cys/Met metabolism PLP-dependent enzyme M0D43_17635 PF00696 Amino acid kinase family M0D43_17635 PF00742 Homoserine dehydrogenase M0D43_17635 PF03447 Homoserine dehydrogenase, NAD binding domain M0D43_17640 PF12697 Alpha/beta hydrolase family M0D43_17645 PF03313 Serine dehydratase alpha chain M0D43_17645 PF03315 Serine dehydratase beta chain M0D43_17665 PF04264 YceI-like domain M0D43_17670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_17670 PF00512 His Kinase A (phospho-acceptor) domain M0D43_17670 PF01627 Hpt domain M0D43_17670 PF00072 Response regulator receiver domain M0D43_17675 PF00512 His Kinase A (phospho-acceptor) domain M0D43_17675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_17675 PF00072 Response regulator receiver domain M0D43_17675 PF09308 LuxQ, periplasmic M0D43_17680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_17680 PF00072 Response regulator receiver domain M0D43_17680 PF09456 RcsC Alpha-Beta-Loop (ABL) M0D43_17680 PF00512 His Kinase A (phospho-acceptor) domain M0D43_17685 PF00672 HAMP domain M0D43_17685 PF00072 Response regulator receiver domain M0D43_17685 PF00512 His Kinase A (phospho-acceptor) domain M0D43_17685 PF17149 Periplasmic sensor domain found in signal transduction proteins M0D43_17685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_17685 PF01627 Hpt domain M0D43_17690 PF07690 Major Facilitator Superfamily M0D43_17695 PF02954 Bacterial regulatory protein, Fis family M0D43_17695 PF00072 Response regulator receiver domain M0D43_17695 PF00158 Sigma-54 interaction domain M0D43_17765 PF01208 Uroporphyrinogen decarboxylase (URO-D) M0D43_17775 PF01761 3-dehydroquinate synthase M0D43_17780 PF01202 Shikimate kinase M0D43_17785 PF01243 Pyridoxamine 5'-phosphate oxidase M0D43_17785 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region M0D43_17795 PF04012 PspA/IM30 family M0D43_17820 PF03738 Glutathionylspermidine synthase preATP-grasp M0D43_17825 PF07690 Major Facilitator Superfamily M0D43_17830 PF00376 MerR family regulatory protein M0D43_17830 PF09278 MerR, DNA binding M0D43_17860 PF04820 Tryptophan halogenase M0D43_17865 PF12706 Beta-lactamase superfamily domain M0D43_17885 PF00324 Amino acid permease M0D43_17895 PF00561 alpha/beta hydrolase fold M0D43_17900 PF00544 Pectate lyase M0D43_17905 PF00324 Amino acid permease M0D43_17915 PF01654 Cytochrome bd terminal oxidase subunit I M0D43_17920 PF02322 Cytochrome bd terminal oxidase subunit II M0D43_17925 PF00756 Putative esterase M0D43_17930 PF01769 Divalent cation transporter M0D43_17930 PF03448 MgtE intracellular N domain M0D43_17930 PF00571 CBS domain M0D43_17935 PF05524 PEP-utilising enzyme, N-terminal M0D43_17935 PF00391 PEP-utilising enzyme, mobile domain M0D43_17935 PF02896 PEP-utilising enzyme, TIM barrel domain M0D43_17940 PF00381 PTS HPr component phosphorylation site M0D43_17950 PF03668 P-loop ATPase protein family M0D43_17955 PF07475 HPr Serine kinase C-terminal domain M0D43_17955 PF02603 HPr Serine kinase N terminus M0D43_17960 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M0D43_17965 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein M0D43_17970 PF04552 Sigma-54, DNA binding domain M0D43_17970 PF04963 Sigma-54 factor, core binding domain M0D43_17970 PF00309 Sigma-54 factor, Activator interacting domain (AID) M0D43_17975 PF00005 ABC transporter M0D43_17995 PF00571 CBS domain M0D43_17995 PF01380 SIS domain M0D43_18000 PF01722 BolA-like protein M0D43_18005 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M0D43_18025 PF00551 Formyl transferase M0D43_18035 PF00586 AIR synthase related protein, N-terminal domain M0D43_18035 PF02769 AIR synthase related protein, C-terminal domain M0D43_18045 PF01594 AI-2E family transporter M0D43_18050 PF00308 Bacterial dnaA protein M0D43_18060 PF00483 Nucleotidyl transferase M0D43_18065 PF01636 Phosphotransferase enzyme family M0D43_18075 PF01546 Peptidase family M20/M25/M40 M0D43_18075 PF07687 Peptidase dimerisation domain M0D43_18090 PF00667 FAD binding domain M0D43_18090 PF00258 Flavodoxin M0D43_18090 PF00175 Oxidoreductase NAD-binding domain M0D43_18095 PF02424 ApbE family M0D43_18120 PF13640 2OG-Fe(II) oxygenase superfamily M0D43_18120 PF18331 PKHD-type hydroxylase C-terminal domain M0D43_18125 PF07715 TonB-dependent Receptor Plug Domain M0D43_18125 PF00593 TonB dependent receptor M0D43_18130 PF00355 Rieske [2Fe-2S] domain M0D43_18140 PF00266 Aminotransferase class-V M0D43_18145 PF01458 Uncharacterized protein family (UPF0051) M0D43_18150 PF00005 ABC transporter M0D43_18155 PF01458 Uncharacterized protein family (UPF0051) M0D43_18160 PF02082 Transcriptional regulator M0D43_18170 PF01965 DJ-1/PfpI family M0D43_18190 PF01476 LysM domain M0D43_18190 PF01551 Peptidase family M23 M0D43_18205 PF03807 NADP oxidoreductase coenzyme F420-dependent M0D43_18205 PF14748 Pyrroline-5-carboxylate reductase dimerisation M0D43_18210 PF01168 Alanine racemase, N-terminal domain M0D43_18215 PF00437 Type II/IV secretion system protein M0D43_18220 PF00437 Type II/IV secretion system protein M0D43_18235 PF13673 Acetyltransferase (GNAT) domain M0D43_18235 PF03352 Methyladenine glycosylase M0D43_18235 PF00117 Glutamine amidotransferase class-I M0D43_18235 PF00958 GMP synthase C terminal domain M0D43_18235 PF13302 Acetyltransferase (GNAT) domain M0D43_18240 PF13687 Domain of unknown function (DUF4153) M0D43_18245 PF02622 Uncharacterized ACR, COG1678 M0D43_18250 PF03652 Holliday junction resolvase M0D43_18255 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M0D43_18255 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M0D43_18260 PF02566 OsmC-like protein M0D43_18270 PF02567 Phenazine biosynthesis-like protein M0D43_18280 PF00696 Amino acid kinase family M0D43_18280 PF01842 ACT domain M0D43_18295 PF08245 Mur ligase middle domain M0D43_18305 PF00348 Polyprenyl synthetase M0D43_18310 PF00436 Single-strand binding protein family M0D43_18325 PF05199 GMC oxidoreductase M0D43_18325 PF00732 GMC oxidoreductase M0D43_18355 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M0D43_18355 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M0D43_18360 PF03825 Nucleoside H+ symporter M0D43_18370 PF00356 Bacterial regulatory proteins, lacI family M0D43_18375 PF00563 EAL domain M0D43_18375 PF00990 Diguanylate cyclase, GGDEF domain M0D43_18375 PF00360 Phytochrome region M0D43_18375 PF01590 GAF domain M0D43_18380 PF08240 Alcohol dehydrogenase GroES-like domain M0D43_18380 PF00107 Zinc-binding dehydrogenase M0D43_18385 PF00111 2Fe-2S iron-sulfur cluster binding domain M0D43_18385 PF01799 [2Fe-2S] binding domain M0D43_18385 PF10518 TAT (twin-arginine translocation) pathway signal sequence M0D43_18390 PF00941 FAD binding domain in molybdopterin dehydrogenase M0D43_18390 PF03450 CO dehydrogenase flavoprotein C-terminal domain M0D43_18395 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain M0D43_18395 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase M0D43_18400 PF13478 XdhC Rossmann domain M0D43_18400 PF02625 XdhC and CoxI family M0D43_18435 PF04328 Selenoprotein, putative M0D43_18440 PF13722 5TM C-terminal transporter carbon starvation CstA M0D43_18440 PF02554 Carbon starvation protein CstA M0D43_18445 PF05726 Pirin C-terminal cupin domain M0D43_18445 PF02678 Pirin M0D43_18460 PF05726 Pirin C-terminal cupin domain M0D43_18460 PF02678 Pirin M0D43_18465 PF04493 Endonuclease V M0D43_18470 PF00300 Histidine phosphatase superfamily (branch 1) M0D43_18480 PF05649 Peptidase family M13 M0D43_18480 PF01431 Peptidase family M13 M0D43_18485 PF13091 PLD-like domain M0D43_18490 PF01339 CheB methylesterase M0D43_18490 PF00072 Response regulator receiver domain M0D43_18495 PF01739 CheR methyltransferase, SAM binding domain M0D43_18495 PF03705 CheR methyltransferase, all-alpha domain M0D43_18500 PF00563 EAL domain M0D43_18500 PF00990 Diguanylate cyclase, GGDEF domain M0D43_18500 PF13426 PAS domain M0D43_18505 PF01584 CheW-like domain M0D43_18510 PF00672 HAMP domain M0D43_18510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D43_18515 PF02895 Signal transducing histidine kinase, homodimeric domain M0D43_18515 PF09078 CheY binding M0D43_18515 PF01584 CheW-like domain M0D43_18515 PF01627 Hpt domain M0D43_18515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_18520 PF01740 STAS domain M0D43_18525 PF00271 Helicase conserved C-terminal domain M0D43_18525 PF02559 CarD-like/TRCF domain M0D43_18525 PF00270 DEAD/DEAH box helicase M0D43_18525 PF17757 UvrB interaction domain M0D43_18525 PF03461 TRCF domain M0D43_18535 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ M0D43_18540 PF00486 Transcriptional regulatory protein, C terminal M0D43_18540 PF00072 Response regulator receiver domain M0D43_18550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_18550 PF00672 HAMP domain M0D43_18550 PF00512 His Kinase A (phospho-acceptor) domain M0D43_18560 PF06123 Inner membrane protein CreD M0D43_18575 PF00795 Carbon-nitrogen hydrolase M0D43_18585 PF00749 tRNA synthetases class I (E and Q), catalytic domain M0D43_18590 PF01475 Ferric uptake regulator family M0D43_18600 PF00529 HlyD membrane-fusion protein of T1SS M0D43_18600 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M0D43_18605 PF00873 AcrB/AcrD/AcrF family M0D43_18610 PF02321 Outer membrane efflux protein M0D43_18615 PF16859 Tetracyclin repressor-like, C-terminal domain M0D43_18615 PF00440 Bacterial regulatory proteins, tetR family M0D43_18625 PF06719 AraC-type transcriptional regulator N-terminus M0D43_18625 PF12833 Helix-turn-helix domain M0D43_18640 PF03466 LysR substrate binding domain M0D43_18640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D43_18645 PF07690 Major Facilitator Superfamily M0D43_18650 PF00248 Aldo/keto reductase family M0D43_18660 PF00082 Subtilase family M0D43_18660 PF01483 Proprotein convertase P-domain M0D43_18670 PF00593 TonB dependent receptor M0D43_18670 PF07715 TonB-dependent Receptor Plug Domain M0D43_18685 PF00654 Voltage gated chloride channel M0D43_18695 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M0D43_18695 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M0D43_18740 PF04542 Sigma-70 region 2 M0D43_18740 PF04539 Sigma-70 region 3 M0D43_18740 PF04545 Sigma-70, region 4 M0D43_18745 PF00271 Helicase conserved C-terminal domain M0D43_18745 PF00270 DEAD/DEAH box helicase M0D43_18745 PF03880 DbpA RNA binding domain M0D43_18750 PF08448 PAS fold M0D43_18750 PF00990 Diguanylate cyclase, GGDEF domain M0D43_18750 PF00563 EAL domain M0D43_18755 PF01479 S4 domain M0D43_18755 PF00849 RNA pseudouridylate synthase M0D43_18760 PF00990 Diguanylate cyclase, GGDEF domain M0D43_18780 PF03737 Aldolase/RraA M0D43_18785 PF00144 Beta-lactamase M0D43_18785 PF07930 D-aminopeptidase, domain B M0D43_18790 PF00999 Sodium/hydrogen exchanger family M0D43_18795 PF00672 HAMP domain M0D43_18795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_18795 PF00512 His Kinase A (phospho-acceptor) domain M0D43_18800 PF00072 Response regulator receiver domain M0D43_18800 PF00486 Transcriptional regulatory protein, C terminal M0D43_18805 PF02321 Outer membrane efflux protein M0D43_18810 PF06629 MltA-interacting protein MipA M0D43_18820 PF00873 AcrB/AcrD/AcrF family M0D43_18830 PF00664 ABC transporter transmembrane region M0D43_18830 PF00005 ABC transporter M0D43_18860 PF01022 Bacterial regulatory protein, arsR family M0D43_18865 PF03466 LysR substrate binding domain M0D43_18865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D43_18910 PF00085 Thioredoxin M0D43_18920 PF08264 Anticodon-binding domain of tRNA M0D43_18920 PF00133 tRNA synthetases class I (I, L, M and V) M0D43_18920 PF13603 Leucyl-tRNA synthetase, Domain 2 M0D43_18935 PF01467 Cytidylyltransferase-like M0D43_18950 PF02590 Predicted SPOUT methyltransferase M0D43_18970 PF04402 Protein of unknown function (DUF541) M0D43_18975 PF02545 Maf-like protein M0D43_18980 PF10150 Ribonuclease E/G family M0D43_18980 PF00575 S1 RNA binding domain M0D43_18985 PF13502 AsmA-like C-terminal region M0D43_18985 PF13116 Protein of unknown function M0D43_18995 PF01523 Putative modulator of DNA gyrase M0D43_19000 PF04751 Protein of unknown function (DUF615) M0D43_19005 PF01523 Putative modulator of DNA gyrase M0D43_19015 PF14521 Lysine-specific metallo-endopeptidase M0D43_19020 PF00348 Polyprenyl synthetase M0D43_19025 PF02609 Exonuclease VII small subunit M0D43_19030 PF01171 PP-loop family M0D43_19030 PF09179 TilS substrate binding domain M0D43_19030 PF11734 TilS substrate C-terminal domain M0D43_19035 PF00245 Alkaline phosphatase M0D43_19040 PF00375 Sodium:dicarboxylate symporter family M0D43_19045 PF08241 Methyltransferase domain M0D43_19060 PF00877 NlpC/P60 family M0D43_19065 PF00877 NlpC/P60 family M0D43_19070 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M0D43_19075 PF04235 Protein of unknown function (DUF418) M0D43_19080 PF01266 FAD dependent oxidoreductase M0D43_19085 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M0D43_19085 PF07992 Pyridine nucleotide-disulphide oxidoreductase M0D43_19105 PF01431 Peptidase family M13 M0D43_19105 PF05649 Peptidase family M13 M0D43_19110 PF05649 Peptidase family M13 M0D43_19110 PF01431 Peptidase family M13 M0D43_19125 PF10609 NUBPL iron-transfer P-loop NTPase M0D43_19130 PF00692 dUTPase M0D43_19155 PF01738 Dienelactone hydrolase family M0D43_19160 PF04055 Radical SAM superfamily M0D43_19160 PF18693 TRAM domain M0D43_19160 PF00919 Uncharacterized protein family UPF0004 M0D43_19165 PF01272 Transcription elongation factor, GreA/GreB, C-term M0D43_19165 PF03449 Transcription elongation factor, N-terminal M0D43_19180 PF00293 NUDIX domain M0D43_19190 PF05872 Bacterial protein of unknown function (DUF853) M0D43_19200 PF02666 Phosphatidylserine decarboxylase M0D43_19205 PF02630 SCO1/SenC M0D43_19210 PF05175 Methyltransferase small domain M0D43_19215 PF01264 Chorismate synthase M0D43_19220 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M0D43_19220 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M0D43_19225 PF01118 Semialdehyde dehydrogenase, NAD binding domain M0D43_19225 PF02774 Semialdehyde dehydrogenase, dimerisation domain M0D43_19245 PF01416 tRNA pseudouridine synthase M0D43_19250 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase M0D43_19260 PF03466 LysR substrate binding domain M0D43_19260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D43_19265 PF00291 Pyridoxal-phosphate dependent enzyme M0D43_19275 PF00290 Tryptophan synthase alpha chain M0D43_19280 PF17848 Acetyl-coA carboxylase zinc finger domain M0D43_19280 PF01039 Carboxyl transferase domain M0D43_19285 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M0D43_19285 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M0D43_19285 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M0D43_19285 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M0D43_19300 PF03707 Bacterial signalling protein N terminal repeat M0D43_19300 PF00990 Diguanylate cyclase, GGDEF domain M0D43_19300 PF00563 EAL domain M0D43_19320 PF00121 Triosephosphate isomerase M0D43_19335 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 M0D43_19340 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit M0D43_19345 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit M0D43_19350 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit M0D43_19360 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit M0D43_19360 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region M0D43_19360 PF10531 SLBB domain M0D43_19365 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region M0D43_19365 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal M0D43_19365 PF00384 Molybdopterin oxidoreductase M0D43_19370 PF00146 NADH dehydrogenase M0D43_19375 PF12838 4Fe-4S dicluster domain M0D43_19380 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 M0D43_19385 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L M0D43_19390 PF00361 Proton-conducting membrane transporter M0D43_19390 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M0D43_19395 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus M0D43_19395 PF00361 Proton-conducting membrane transporter M0D43_19400 PF00361 Proton-conducting membrane transporter M0D43_19410 PF17384 RimP C-terminal SH3 domain M0D43_19410 PF02576 RimP N-terminal domain M0D43_19415 PF13184 NusA-like KH domain M0D43_19415 PF08529 NusA N-terminal domain M0D43_19415 PF00575 S1 RNA binding domain M0D43_19420 PF11987 Translation-initiation factor 2 M0D43_19420 PF00009 Elongation factor Tu GTP binding domain M0D43_19420 PF08364 Bacterial translation initiation factor IF-2 associated region M0D43_19420 PF04760 Translation initiation factor IF-2, N-terminal region M0D43_19425 PF02033 Ribosome-binding factor A M0D43_19430 PF16198 tRNA pseudouridylate synthase B C-terminal domain M0D43_19430 PF01509 TruB family pseudouridylate synthase (N terminal domain) M0D43_19430 PF09157 Pseudouridine synthase II TruB, C-terminal M0D43_19435 PF00312 Ribosomal protein S15 M0D43_19440 PF00575 S1 RNA binding domain M0D43_19440 PF01138 3' exoribonuclease family, domain 1 M0D43_19440 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain M0D43_19440 PF00013 KH domain M0D43_19440 PF03725 3' exoribonuclease family, domain 2 M0D43_19450 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain M0D43_19450 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain M0D43_19460 PF00731 AIR carboxylase M0D43_19465 PF02222 ATP-grasp domain M0D43_19465 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain M0D43_19470 PF02777 Iron/manganese superoxide dismutases, C-terminal domain M0D43_19470 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain M0D43_19475 PF00462 Glutaredoxin M0D43_19485 PF01914 MarC family integral membrane protein M0D43_19490 PF00593 TonB dependent receptor M0D43_19495 PF11892 Domain of unknown function (DUF3412) M0D43_19495 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases M0D43_19495 PF03641 Possible lysine decarboxylase M0D43_19500 PF07963 Prokaryotic N-terminal methylation motif M0D43_19500 PF12019 Type II transport protein GspH M0D43_19520 PF05567 Neisseria PilC beta-propeller domain M0D43_19525 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor M0D43_19525 PF07963 Prokaryotic N-terminal methylation motif M0D43_19535 PF00114 Pilin (bacterial filament) M0D43_19535 PF07963 Prokaryotic N-terminal methylation motif M0D43_19540 PF00271 Helicase conserved C-terminal domain M0D43_19540 PF04851 Type III restriction enzyme, res subunit M0D43_19540 PF02151 UvrB/uvrC motif M0D43_19540 PF12344 Ultra-violet resistance protein B M0D43_19540 PF17757 UvrB interaction domain M0D43_19555 PF02534 Type IV secretory system Conjugative DNA transfer M0D43_19575 PF03743 Bacterial conjugation TrbI-like protein M0D43_19580 PF00437 Type II/IV secretion system protein M0D43_19585 PF01464 Transglycosylase SLT domain M0D43_19595 PF05101 Type IV secretory pathway, VirB3-like protein M0D43_19600 PF03135 CagE, TrbE, VirB family, component of type IV transporter system M0D43_19605 PF00128 Alpha amylase, catalytic domain M0D43_19625 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M0D43_19630 PF00128 Alpha amylase, catalytic domain M0D43_19630 PF00686 Starch binding domain M0D43_19635 PF00356 Bacterial regulatory proteins, lacI family M0D43_19640 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M0D43_19640 PF03129 Anticodon binding domain M0D43_19640 PF02824 TGS domain M0D43_19640 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M0D43_19645 PF00707 Translation initiation factor IF-3, C-terminal domain M0D43_19645 PF05198 Translation initiation factor IF-3, N-terminal domain M0D43_19650 PF01632 Ribosomal protein L35 M0D43_19655 PF00453 Ribosomal protein L20 M0D43_19660 PF01409 tRNA synthetases class II core domain (F) M0D43_19660 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain M0D43_19665 PF03483 B3/4 domain M0D43_19665 PF03484 tRNA synthetase B5 domain M0D43_19665 PF03147 Ferredoxin-fold anticodon binding domain M0D43_19665 PF01588 Putative tRNA binding domain M0D43_19665 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain M0D43_19670 PF00216 Bacterial DNA-binding protein M0D43_19675 PF13411 MerR HTH family regulatory protein M0D43_19695 PF02397 Bacterial sugar transferase M0D43_19725 PF14667 Polysaccharide biosynthesis C-terminal domain M0D43_19740 PF03808 Glycosyl transferase WecB/TagA/CpsF family M0D43_19755 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M0D43_19755 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M0D43_19765 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family M0D43_19785 PF13292 1-deoxy-D-xylulose-5-phosphate synthase M0D43_19785 PF02779 Transketolase, pyrimidine binding domain M0D43_19785 PF02780 Transketolase, C-terminal domain M0D43_19795 PF02770 Acyl-CoA dehydrogenase, middle domain M0D43_19795 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M0D43_19795 PF12806 Acetyl-CoA dehydrogenase C-terminal like M0D43_19795 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M0D43_19805 PF08212 Lipocalin-like domain M0D43_19830 PF00893 Small Multidrug Resistance protein M0D43_19835 PF00072 Response regulator receiver domain M0D43_19835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_19835 PF13426 PAS domain M0D43_19840 PF04362 Bacterial Fe(2+) trafficking M0D43_19845 PF00633 Helix-hairpin-helix motif M0D43_19845 PF00730 HhH-GPD superfamily base excision DNA repair protein M0D43_19845 PF10576 Iron-sulfur binding domain of endonuclease III M0D43_19845 PF14815 NUDIX domain M0D43_19850 PF00448 SRP54-type protein, GTPase domain M0D43_19850 PF02881 SRP54-type protein, helical bundle domain M0D43_19860 PF05544 Proline racemase M0D43_19865 PF01266 FAD dependent oxidoreductase M0D43_19875 PF07992 Pyridine nucleotide-disulphide oxidoreductase M0D43_19875 PF04324 BFD-like [2Fe-2S] binding domain M0D43_19880 PF00701 Dihydrodipicolinate synthetase family M0D43_19885 PF00171 Aldehyde dehydrogenase family M0D43_19890 PF01321 Creatinase/Prolidase N-terminal domain M0D43_19890 PF00557 Metallopeptidase family M24 M0D43_19905 PF13520 Amino acid permease M0D43_19935 PF00593 TonB dependent receptor M0D43_19935 PF07715 TonB-dependent Receptor Plug Domain M0D43_19940 PF07532 Bacterial Ig-like domain (group 4) M0D43_19945 PF07532 Bacterial Ig-like domain (group 4) M0D43_19950 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region M0D43_19950 PF00326 Prolyl oligopeptidase family M0D43_19955 PF07715 TonB-dependent Receptor Plug Domain M0D43_19955 PF00593 TonB dependent receptor M0D43_19970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_19970 PF00183 Hsp90 protein M0D43_19980 PF01467 Cytidylyltransferase-like M0D43_19990 PF00037 4Fe-4S binding domain M0D43_20005 PF02927 Cellulase N-terminal ig-like domain M0D43_20005 PF00759 Glycosyl hydrolase family 9 M0D43_20035 PF00202 Aminotransferase class-III M0D43_20045 PF02547 Queuosine biosynthesis protein M0D43_20050 PF01702 Queuine tRNA-ribosyltransferase M0D43_20055 PF02699 Preprotein translocase subunit M0D43_20060 PF07549 SecD/SecF GG Motif M0D43_20060 PF13721 SecD export protein N-terminal TM region M0D43_20060 PF02355 Protein export membrane protein M0D43_20065 PF07549 SecD/SecF GG Motif M0D43_20065 PF02355 Protein export membrane protein M0D43_20115 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M0D43_20120 PF00294 pfkB family carbohydrate kinase M0D43_20125 PF05524 PEP-utilising enzyme, N-terminal M0D43_20125 PF00391 PEP-utilising enzyme, mobile domain M0D43_20125 PF02896 PEP-utilising enzyme, TIM barrel domain M0D43_20125 PF00381 PTS HPr component phosphorylation site M0D43_20125 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M0D43_20130 PF00356 Bacterial regulatory proteins, lacI family M0D43_20135 PF00873 AcrB/AcrD/AcrF family M0D43_20150 PF05088 Bacterial NAD-glutamate dehydrogenase M0D43_20195 PF07690 Major Facilitator Superfamily M0D43_20200 PF00072 Response regulator receiver domain M0D43_20205 PF00672 HAMP domain M0D43_20205 PF00512 His Kinase A (phospho-acceptor) domain M0D43_20205 PF01627 Hpt domain M0D43_20205 PF00072 Response regulator receiver domain M0D43_20205 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M0D43_20205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_20210 PF04286 Protein of unknown function (DUF445) M0D43_20220 PF00202 Aminotransferase class-III M0D43_20230 PF07690 Major Facilitator Superfamily M0D43_20235 PF02634 FdhD/NarQ family M0D43_20240 PF00384 Molybdopterin oxidoreductase M0D43_20250 PF07690 Major Facilitator Superfamily M0D43_20250 PF00083 Sugar (and other) transporter M0D43_20255 PF00072 Response regulator receiver domain M0D43_20255 PF00990 Diguanylate cyclase, GGDEF domain M0D43_20260 PF01266 FAD dependent oxidoreductase M0D43_20265 PF00120 Glutamine synthetase, catalytic domain M0D43_20270 PF07722 Peptidase C26 M0D43_20275 PF00120 Glutamine synthetase, catalytic domain M0D43_20280 PF00202 Aminotransferase class-III M0D43_20285 PF13416 Bacterial extracellular solute-binding protein M0D43_20290 PF13533 Biotin-lipoyl like M0D43_20295 PF07690 Major Facilitator Superfamily M0D43_20300 PF02321 Outer membrane efflux protein M0D43_20305 PF08402 TOBE domain M0D43_20305 PF00005 ABC transporter M0D43_20310 PF00528 Binding-protein-dependent transport system inner membrane component M0D43_20315 PF00528 Binding-protein-dependent transport system inner membrane component M0D43_20325 PF00171 Aldehyde dehydrogenase family M0D43_20340 PF00571 CBS domain M0D43_20340 PF03471 Transporter associated domain M0D43_20350 PF02130 Uncharacterized protein family UPF0054 M0D43_20360 PF02562 PhoH-like protein M0D43_20365 PF00919 Uncharacterized protein family UPF0004 M0D43_20365 PF04055 Radical SAM superfamily M0D43_20365 PF01938 TRAM domain M0D43_20380 PF01464 Transglycosylase SLT domain M0D43_20385 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal M0D43_20385 PF00355 Rieske [2Fe-2S] domain M0D43_20390 PF00032 Cytochrome b(C-terminal)/b6/petD M0D43_20390 PF00033 Cytochrome b/b6/petB M0D43_20395 PF02167 Cytochrome C1 family M0D43_20400 PF00043 Glutathione S-transferase, C-terminal domain M0D43_20400 PF02798 Glutathione S-transferase, N-terminal domain M0D43_20405 PF04386 Stringent starvation protein B M0D43_20430 PF00271 Helicase conserved C-terminal domain M0D43_20430 PF08494 DEAD/H associated M0D43_20430 PF00270 DEAD/DEAH box helicase M0D43_20440 PF01584 CheW-like domain M0D43_20470 PF13298 DNA polymerase Ligase (LigD) M0D43_20470 PF01068 ATP dependent DNA ligase domain M0D43_20470 PF04679 ATP dependent DNA ligase C terminal region M0D43_20475 PF00570 HRDC domain M0D43_20475 PF01612 3'-5' exonuclease M0D43_20485 PF03781 Sulfatase-modifying factor enzyme 1 M0D43_20495 PF02601 Exonuclease VII, large subunit M0D43_20495 PF13742 OB-fold nucleic acid binding domain M0D43_20505 PF03853 YjeF-related protein N-terminus M0D43_20505 PF01256 Carbohydrate kinase M0D43_20510 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE M0D43_20515 PF11741 AMIN domain M0D43_20515 PF01520 N-acetylmuramoyl-L-alanine amidase M0D43_20520 PF08676 MutL C terminal dimerisation domain M0D43_20520 PF01119 DNA mismatch repair protein, C-terminal domain M0D43_20535 PF05233 PHB accumulation regulatory domain M0D43_20535 PF07879 PHB/PHA accumulation regulator DNA-binding domain M0D43_20540 PF00106 short chain dehydrogenase M0D43_20545 PF00749 tRNA synthetases class I (E and Q), catalytic domain M0D43_20550 PF01435 Peptidase family M48 M0D43_20555 PF00563 EAL domain M0D43_20555 PF00990 Diguanylate cyclase, GGDEF domain M0D43_20555 PF00072 Response regulator receiver domain M0D43_20565 PF07152 YaeQ protein M0D43_20570 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 M0D43_20575 PF00313 'Cold-shock' DNA-binding domain M0D43_20580 PF14497 Glutathione S-transferase, C-terminal domain M0D43_20580 PF02798 Glutathione S-transferase, N-terminal domain M0D43_20590 PF02696 Uncharacterized ACR, YdiU/UPF0061 family M0D43_20595 PF00156 Phosphoribosyl transferase domain M0D43_20600 PF00271 Helicase conserved C-terminal domain M0D43_20600 PF00270 DEAD/DEAH box helicase M0D43_20600 PF03880 DbpA RNA binding domain M0D43_20605 PF00005 ABC transporter M0D43_20605 PF12848 ABC transporter M0D43_20605 PF16326 ABC transporter C-terminal domain M0D43_20615 PF00545 ribonuclease M0D43_20620 PF02777 Iron/manganese superoxide dismutases, C-terminal domain M0D43_20620 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain M0D43_20625 PF00459 Inositol monophosphatase family M0D43_20630 PF00588 SpoU rRNA Methylase family M0D43_20640 PF00563 EAL domain M0D43_20640 PF03707 Bacterial signalling protein N terminal repeat M0D43_20640 PF13188 PAS domain M0D43_20640 PF00990 Diguanylate cyclase, GGDEF domain M0D43_20645 PF04055 Radical SAM superfamily M0D43_20650 PF01132 Elongation factor P (EF-P) OB domain M0D43_20650 PF08207 Elongation factor P (EF-P) KOW-like domain M0D43_20650 PF09285 Elongation factor P, C-terminal M0D43_20660 PF01979 Amidohydrolase family M0D43_20670 PF13419 Haloacid dehalogenase-like hydrolase M0D43_20680 PF00295 Glycosyl hydrolases family 28 M0D43_20685 PF01095 Pectinesterase M0D43_20705 PF05985 Ethanolamine ammonia-lyase light chain (EutC) M0D43_20710 PF06751 Ethanolamine ammonia lyase large subunit (EutB) M0D43_20720 PF08460 Bacterial SH3 domain M0D43_20720 PF01551 Peptidase family M23 M0D43_20725 PF01979 Amidohydrolase family M0D43_20730 PF01809 Putative membrane protein insertion efficiency factor M0D43_20740 PF01258 Prokaryotic dksA/traR C4-type zinc finger M0D43_20755 PF02657 Fe-S metabolism associated domain M0D43_20760 PF01406 tRNA synthetases class I (C) catalytic domain M0D43_20760 PF09190 DALR domain M0D43_20770 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M0D43_20770 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M0D43_20775 PF00764 Arginosuccinate synthase M0D43_20780 PF01546 Peptidase family M20/M25/M40 M0D43_20780 PF07687 Peptidase dimerisation domain M0D43_20785 PF00696 Amino acid kinase family M0D43_20785 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase M0D43_20795 PF01118 Semialdehyde dehydrogenase, NAD binding domain M0D43_20800 PF00206 Lyase M0D43_20825 PF00696 Amino acid kinase family M0D43_20825 PF01472 PUA domain M0D43_20830 PF00171 Aldehyde dehydrogenase family M0D43_20845 PF02129 X-Pro dipeptidyl-peptidase (S15 family) M0D43_20845 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain M0D43_20865 PF02322 Cytochrome bd terminal oxidase subunit II M0D43_20870 PF01654 Cytochrome bd terminal oxidase subunit I M0D43_20875 PF00005 ABC transporter M0D43_20875 PF00664 ABC transporter transmembrane region M0D43_20880 PF00664 ABC transporter transmembrane region M0D43_20880 PF00005 ABC transporter M0D43_20890 PF00313 'Cold-shock' DNA-binding domain M0D43_20895 PF00561 alpha/beta hydrolase fold M0D43_20905 PF03918 Cytochrome C biogenesis protein M0D43_20910 PF08534 Redoxin M0D43_20915 PF01578 Cytochrome C assembly protein M0D43_20915 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal M0D43_20920 PF03100 CcmE M0D43_20930 PF01578 Cytochrome C assembly protein M0D43_20935 PF03379 CcmB protein M0D43_20940 PF00005 ABC transporter M0D43_20945 PF00155 Aminotransferase class I and II M0D43_20950 PF00795 Carbon-nitrogen hydrolase M0D43_20965 PF00849 RNA pseudouridylate synthase M0D43_20965 PF01479 S4 domain M0D43_20970 PF04079 Segregation and condensation complex subunit ScpB M0D43_20975 PF02616 Segregation and condensation protein ScpA M0D43_20980 PF03795 YCII-related domain M0D43_20990 PF00356 Bacterial regulatory proteins, lacI family M0D43_21010 PF00528 Binding-protein-dependent transport system inner membrane component M0D43_21015 PF00528 Binding-protein-dependent transport system inner membrane component M0D43_21040 PF00795 Carbon-nitrogen hydrolase M0D43_21045 PF04371 Porphyromonas-type peptidyl-arginine deiminase M0D43_21055 PF00444 Ribosomal protein L36 M0D43_21060 PF02224 Cytidylate kinase M0D43_21065 PF00575 S1 RNA binding domain M0D43_21070 PF00216 Bacterial DNA-binding protein M0D43_21080 PF18073 Rubredoxin metal binding domain M0D43_21085 PF00953 Glycosyl transferase family 4 M0D43_21090 PF02719 Polysaccharide biosynthesis protein M0D43_21095 PF00483 Nucleotidyl transferase M0D43_21100 PF00999 Sodium/hydrogen exchanger family M0D43_21100 PF02254 TrkA-N domain M0D43_21110 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain M0D43_21110 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain M0D43_21115 PF00571 CBS domain M0D43_21115 PF00478 IMP dehydrogenase / GMP reductase domain M0D43_21120 PF02540 NAD synthase M0D43_21120 PF00117 Glutamine amidotransferase class-I M0D43_21120 PF00958 GMP synthase C terminal domain M0D43_21130 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) M0D43_21135 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus M0D43_21135 PF00361 Proton-conducting membrane transporter M0D43_21135 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M0D43_21140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D43_21140 PF03466 LysR substrate binding domain M0D43_21145 PF03466 LysR substrate binding domain M0D43_21145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D43_21150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D43_21150 PF03466 LysR substrate binding domain M0D43_21190 PF00196 Bacterial regulatory proteins, luxR family M0D43_21190 PF00072 Response regulator receiver domain M0D43_21205 PF00857 Isochorismatase family M0D43_21215 PF07969 Amidohydrolase family M0D43_21220 PF05977 Transmembrane secretion effector M0D43_21230 PF00561 alpha/beta hydrolase fold M0D43_21235 PF01566 Natural resistance-associated macrophage protein M0D43_21240 PF01325 Iron dependent repressor, N-terminal DNA binding domain M0D43_21240 PF02742 Iron dependent repressor, metal binding and dimerisation domain M0D43_21245 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M0D43_21250 PF00929 Exonuclease M0D43_21255 PF00924 Mechanosensitive ion channel M0D43_21255 PF05552 Conserved TM helix M0D43_21260 PF00391 PEP-utilising enzyme, mobile domain M0D43_21260 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain M0D43_21260 PF02896 PEP-utilising enzyme, TIM barrel domain M0D43_21265 PF03618 Kinase/pyrophosphorylase M0D43_21285 PF01066 CDP-alcohol phosphatidyltransferase M0D43_21295 PF00561 alpha/beta hydrolase fold M0D43_21310 PF01266 FAD dependent oxidoreductase M0D43_21310 PF00355 Rieske [2Fe-2S] domain M0D43_21320 PF16921 Tex protein YqgF-like domain M0D43_21320 PF17674 HHH domain M0D43_21320 PF00575 S1 RNA binding domain M0D43_21320 PF09371 Tex-like protein N-terminal domain M0D43_21325 PF00512 His Kinase A (phospho-acceptor) domain M0D43_21325 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M0D43_21325 PF00072 Response regulator receiver domain M0D43_21325 PF00672 HAMP domain M0D43_21325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_21325 PF01627 Hpt domain M0D43_21365 PF00034 Cytochrome c M0D43_21375 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M0D43_21380 PF00873 AcrB/AcrD/AcrF family M0D43_21385 PF00873 AcrB/AcrD/AcrF family M0D43_21390 PF01081 KDPG and KHG aldolase M0D43_21395 PF00920 Dehydratase family M0D43_21400 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase M0D43_21405 PF02685 Glucokinase M0D43_21410 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain M0D43_21410 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain M0D43_21415 PF00005 ABC transporter M0D43_21415 PF17912 MalK OB fold domain M0D43_21435 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M0D43_21440 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M0D43_21445 PF02910 Fumarate reductase flavoprotein C-term M0D43_21445 PF00890 FAD binding domain M0D43_21455 PF13085 2Fe-2S iron-sulfur cluster binding domain M0D43_21460 PF03937 Flavinator of succinate dehydrogenase M0D43_21470 PF12704 MacB-like periplasmic core domain M0D43_21470 PF02687 FtsX-like permease family M0D43_21475 PF00005 ABC transporter M0D43_21490 PF01618 MotA/TolQ/ExbB proton channel family M0D43_21500 PF00005 ABC transporter M0D43_21500 PF00664 ABC transporter transmembrane region M0D43_21505 PF02606 Tetraacyldisaccharide-1-P 4'-kinase M0D43_21510 PF02348 Cytidylyltransferase M0D43_21515 PF01451 Low molecular weight phosphotyrosine protein phosphatase M0D43_21525 PF02151 UvrB/uvrC motif M0D43_21525 PF08459 UvrC Helix-hairpin-helix N-terminal M0D43_21525 PF01541 GIY-YIG catalytic domain M0D43_21530 PF01066 CDP-alcohol phosphatidyltransferase M0D43_21555 PF00501 AMP-binding enzyme M0D43_21555 PF13193 AMP-binding enzyme C-terminal domain M0D43_21555 PF00668 Condensation domain M0D43_21555 PF00550 Phosphopantetheine attachment site M0D43_21555 PF00975 Thioesterase domain M0D43_21560 PF07993 Male sterility protein M0D43_21560 PF00668 Condensation domain M0D43_21560 PF13193 AMP-binding enzyme C-terminal domain M0D43_21560 PF00550 Phosphopantetheine attachment site M0D43_21560 PF00501 AMP-binding enzyme M0D43_21565 PF01648 4'-phosphopantetheinyl transferase superfamily M0D43_21565 PF17837 4'-phosphopantetheinyl transferase N-terminal domain M0D43_21575 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M0D43_21575 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M0D43_21575 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M0D43_21585 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M0D43_21595 PF00581 Rhodanese-like domain M0D43_21595 PF17773 UPF0176 acylphosphatase like domain M0D43_21600 PF00072 Response regulator receiver domain M0D43_21600 PF00196 Bacterial regulatory proteins, luxR family M0D43_21605 PF12111 Polyribonucleotide phosphorylase C terminal M0D43_21605 PF10150 Ribonuclease E/G family M0D43_21605 PF00575 S1 RNA binding domain M0D43_21610 PF01479 S4 domain M0D43_21610 PF00849 RNA pseudouridylate synthase M0D43_21615 PF11737 Protein of unknown function (DUF3300) M0D43_21620 PF02535 ZIP Zinc transporter M0D43_21630 PF01329 Pterin 4 alpha carbinolamine dehydratase M0D43_21635 PF01106 NifU-like domain M0D43_21650 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 M0D43_21655 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath M0D43_21660 PF05638 Type VI secretion system effector, Hcp M0D43_21665 PF07024 ImpE protein M0D43_21670 PF04965 Gene 25-like lysozyme M0D43_21675 PF05947 Type VI secretion system, TssF M0D43_21685 PF00004 ATPase family associated with various cellular activities (AAA) M0D43_21685 PF07724 AAA domain (Cdc48 subfamily) M0D43_21685 PF17871 AAA lid domain M0D43_21685 PF10431 C-terminal, D2-small domain, of ClpB protein M0D43_21700 PF06715 Gp5 C-terminal repeat (3 copies) M0D43_21700 PF04717 Type VI secretion system, phage-baseplate injector M0D43_21715 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE M0D43_21725 PF06761 Intracellular multiplication and human macrophage-killing M0D43_21725 PF14331 ImcF-related N-terminal domain M0D43_21725 PF06744 Type VI secretion protein IcmF C-terminal M0D43_21740 PF00069 Protein kinase domain M0D43_21750 PF06812 ImpA, N-terminal, type VI secretion system M0D43_21755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D43_21755 PF03466 LysR substrate binding domain M0D43_21760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D43_21760 PF00512 His Kinase A (phospho-acceptor) domain M0D43_21765 PF03150 Di-haem cytochrome c peroxidase M0D43_21765 PF00034 Cytochrome c M0D43_21770 PF00072 Response regulator receiver domain M0D43_21770 PF00486 Transcriptional regulatory protein, C terminal M0D43_21790 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M0D43_21790 PF00529 HlyD membrane-fusion protein of T1SS M0D43_21795 PF00873 AcrB/AcrD/AcrF family M0D43_21800 PF00440 Bacterial regulatory proteins, tetR family M0D43_21800 PF18665 Tetracyclin repressor-like, C-terminal domain M0D43_21820 PF00732 GMC oxidoreductase M0D43_21820 PF05199 GMC oxidoreductase M0D43_21825 PF00106 short chain dehydrogenase M0D43_21835 PF07517 SecA DEAD-like domain M0D43_21835 PF07516 SecA Wing and Scaffold domain M0D43_21835 PF01043 SecA preprotein cross-linking domain M0D43_21835 PF02810 SEC-C motif M0D43_21850 PF07517 SecA DEAD-like domain M0D43_21850 PF02810 SEC-C motif M0D43_21850 PF01043 SecA preprotein cross-linking domain M0D43_21850 PF07516 SecA Wing and Scaffold domain M0D43_21865 PF07516 SecA Wing and Scaffold domain M0D43_21865 PF02810 SEC-C motif M0D43_21865 PF01043 SecA preprotein cross-linking domain M0D43_21865 PF07517 SecA DEAD-like domain M0D43_21880 PF01043 SecA preprotein cross-linking domain M0D43_21880 PF07517 SecA DEAD-like domain M0D43_21880 PF07516 SecA Wing and Scaffold domain M0D43_21880 PF02810 SEC-C motif M0D43_21900 PF18456 Diiron non-heme beta-hydroxylase N-terminal domain M0D43_21900 PF12706 Beta-lactamase superfamily domain M0D43_21905 PF18456 Diiron non-heme beta-hydroxylase N-terminal domain M0D43_21905 PF12706 Beta-lactamase superfamily domain M0D43_21910 PF18456 Diiron non-heme beta-hydroxylase N-terminal domain M0D43_21910 PF12706 Beta-lactamase superfamily domain M0D43_21915 PF03621 MbtH-like protein M0D43_21920 PF00664 ABC transporter transmembrane region M0D43_21920 PF00005 ABC transporter M0D43_21925 PF00378 Enoyl-CoA hydratase/isomerase M0D43_21930 PF00155 Aminotransferase class I and II M0D43_21935 PF00378 Enoyl-CoA hydratase/isomerase M0D43_21945 PF02797 Chalcone and stilbene synthases, C-terminal domain M0D43_21945 PF00195 Chalcone and stilbene synthases, N-terminal domain M0D43_21955 PF13193 AMP-binding enzyme C-terminal domain M0D43_21955 PF00668 Condensation domain M0D43_21955 PF00550 Phosphopantetheine attachment site M0D43_21955 PF00975 Thioesterase domain M0D43_21955 PF00501 AMP-binding enzyme M0D43_21960 PF00501 AMP-binding enzyme M0D43_21960 PF13193 AMP-binding enzyme C-terminal domain M0D43_21960 PF00668 Condensation domain M0D43_21960 PF00550 Phosphopantetheine attachment site M0D43_21960 PF00975 Thioesterase domain M0D43_21965 PF13193 AMP-binding enzyme C-terminal domain M0D43_21965 PF00668 Condensation domain M0D43_21965 PF00550 Phosphopantetheine attachment site M0D43_21965 PF00975 Thioesterase domain M0D43_21965 PF00501 AMP-binding enzyme M0D43_21975 PF00501 AMP-binding enzyme M0D43_21975 PF13193 AMP-binding enzyme C-terminal domain M0D43_21975 PF00668 Condensation domain M0D43_21975 PF00550 Phosphopantetheine attachment site