locus-tag class description M0D45_00010 PF00501 AMP-binding enzyme M0D45_00010 PF13193 AMP-binding enzyme C-terminal domain M0D45_00010 PF00668 Condensation domain M0D45_00010 PF07993 Male sterility protein M0D45_00010 PF00550 Phosphopantetheine attachment site M0D45_00015 PF00975 Thioesterase domain M0D45_00015 PF00550 Phosphopantetheine attachment site M0D45_00015 PF00668 Condensation domain M0D45_00015 PF13193 AMP-binding enzyme C-terminal domain M0D45_00015 PF00501 AMP-binding enzyme M0D45_00020 PF07993 Male sterility protein M0D45_00020 PF00668 Condensation domain M0D45_00020 PF13193 AMP-binding enzyme C-terminal domain M0D45_00020 PF00501 AMP-binding enzyme M0D45_00020 PF00550 Phosphopantetheine attachment site M0D45_00025 PF00975 Thioesterase domain M0D45_00025 PF00550 Phosphopantetheine attachment site M0D45_00025 PF00668 Condensation domain M0D45_00025 PF13193 AMP-binding enzyme C-terminal domain M0D45_00025 PF00501 AMP-binding enzyme M0D45_00030 PF00501 AMP-binding enzyme M0D45_00030 PF13193 AMP-binding enzyme C-terminal domain M0D45_00030 PF00668 Condensation domain M0D45_00030 PF00550 Phosphopantetheine attachment site M0D45_00030 PF00975 Thioesterase domain M0D45_00040 PF00195 Chalcone and stilbene synthases, N-terminal domain M0D45_00040 PF02797 Chalcone and stilbene synthases, C-terminal domain M0D45_00050 PF00378 Enoyl-CoA hydratase/isomerase M0D45_00055 PF00155 Aminotransferase class I and II M0D45_00060 PF00378 Enoyl-CoA hydratase/isomerase M0D45_00065 PF00005 ABC transporter M0D45_00065 PF00664 ABC transporter transmembrane region M0D45_00070 PF03621 MbtH-like protein M0D45_00075 PF18456 Diiron non-heme beta-hydroxylase N-terminal domain M0D45_00075 PF12706 Beta-lactamase superfamily domain M0D45_00080 PF12706 Beta-lactamase superfamily domain M0D45_00080 PF18456 Diiron non-heme beta-hydroxylase N-terminal domain M0D45_00090 PF00106 short chain dehydrogenase M0D45_00095 PF00732 GMC oxidoreductase M0D45_00095 PF05199 GMC oxidoreductase M0D45_00115 PF00440 Bacterial regulatory proteins, tetR family M0D45_00115 PF18665 Tetracyclin repressor-like, C-terminal domain M0D45_00120 PF00873 AcrB/AcrD/AcrF family M0D45_00125 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M0D45_00125 PF00529 HlyD membrane-fusion protein of T1SS M0D45_00145 PF00486 Transcriptional regulatory protein, C terminal M0D45_00145 PF00072 Response regulator receiver domain M0D45_00150 PF00034 Cytochrome c M0D45_00150 PF03150 Di-haem cytochrome c peroxidase M0D45_00155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_00155 PF00512 His Kinase A (phospho-acceptor) domain M0D45_00160 PF03466 LysR substrate binding domain M0D45_00160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D45_00165 PF06812 ImpA, N-terminal, type VI secretion system M0D45_00175 PF00069 Protein kinase domain M0D45_00190 PF06744 Type VI secretion protein IcmF C-terminal M0D45_00190 PF14331 ImcF-related N-terminal domain M0D45_00190 PF06761 Intracellular multiplication and human macrophage-killing M0D45_00200 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE M0D45_00215 PF04717 Type VI secretion system, phage-baseplate injector M0D45_00215 PF06715 Gp5 C-terminal repeat (3 copies) M0D45_00235 PF10431 C-terminal, D2-small domain, of ClpB protein M0D45_00235 PF17871 AAA lid domain M0D45_00235 PF07724 AAA domain (Cdc48 subfamily) M0D45_00235 PF00004 ATPase family associated with various cellular activities (AAA) M0D45_00245 PF05947 Type VI secretion system, TssF M0D45_00250 PF04965 Gene 25-like lysozyme M0D45_00255 PF07024 ImpE protein M0D45_00260 PF05638 Type VI secretion system effector, Hcp M0D45_00265 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath M0D45_00270 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 M0D45_00285 PF01106 NifU-like domain M0D45_00290 PF01329 Pterin 4 alpha carbinolamine dehydratase M0D45_00300 PF02535 ZIP Zinc transporter M0D45_00305 PF11737 Protein of unknown function (DUF3300) M0D45_00310 PF01479 S4 domain M0D45_00310 PF00849 RNA pseudouridylate synthase M0D45_00315 PF00575 S1 RNA binding domain M0D45_00315 PF10150 Ribonuclease E/G family M0D45_00315 PF12111 Polyribonucleotide phosphorylase C terminal M0D45_00320 PF00072 Response regulator receiver domain M0D45_00320 PF00196 Bacterial regulatory proteins, luxR family M0D45_00325 PF17773 UPF0176 acylphosphatase like domain M0D45_00325 PF00581 Rhodanese-like domain M0D45_00335 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M0D45_00345 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M0D45_00345 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M0D45_00345 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M0D45_00355 PF17837 4'-phosphopantetheinyl transferase N-terminal domain M0D45_00355 PF01648 4'-phosphopantetheinyl transferase superfamily M0D45_00360 PF00501 AMP-binding enzyme M0D45_00360 PF13193 AMP-binding enzyme C-terminal domain M0D45_00360 PF00668 Condensation domain M0D45_00360 PF00550 Phosphopantetheine attachment site M0D45_00365 PF00501 AMP-binding enzyme M0D45_00365 PF13193 AMP-binding enzyme C-terminal domain M0D45_00365 PF00668 Condensation domain M0D45_00365 PF00550 Phosphopantetheine attachment site M0D45_00365 PF00975 Thioesterase domain M0D45_00390 PF01066 CDP-alcohol phosphatidyltransferase M0D45_00395 PF08459 UvrC Helix-hairpin-helix N-terminal M0D45_00395 PF02151 UvrB/uvrC motif M0D45_00395 PF01541 GIY-YIG catalytic domain M0D45_00405 PF01451 Low molecular weight phosphotyrosine protein phosphatase M0D45_00410 PF02348 Cytidylyltransferase M0D45_00415 PF02606 Tetraacyldisaccharide-1-P 4'-kinase M0D45_00420 PF00664 ABC transporter transmembrane region M0D45_00420 PF00005 ABC transporter M0D45_00430 PF01618 MotA/TolQ/ExbB proton channel family M0D45_00445 PF00005 ABC transporter M0D45_00450 PF12704 MacB-like periplasmic core domain M0D45_00450 PF02687 FtsX-like permease family M0D45_00460 PF03937 Flavinator of succinate dehydrogenase M0D45_00465 PF13085 2Fe-2S iron-sulfur cluster binding domain M0D45_00475 PF00890 FAD binding domain M0D45_00475 PF02910 Fumarate reductase flavoprotein C-term M0D45_00480 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M0D45_00485 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M0D45_00505 PF00005 ABC transporter M0D45_00505 PF17912 MalK OB fold domain M0D45_00510 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain M0D45_00510 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain M0D45_00515 PF02685 Glucokinase M0D45_00520 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase M0D45_00525 PF00920 Dehydratase family M0D45_00530 PF01081 KDPG and KHG aldolase M0D45_00535 PF00873 AcrB/AcrD/AcrF family M0D45_00540 PF00873 AcrB/AcrD/AcrF family M0D45_00545 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M0D45_00555 PF00034 Cytochrome c M0D45_00590 PF00589 Phage integrase family M0D45_00650 PF06791 Prophage tail length tape measure protein M0D45_00725 PF10668 Phage terminase small subunit M0D45_00725 PF03592 Terminase small subunit M0D45_00805 PF03796 DnaB-like helicase C terminal domain M0D45_00805 PF00772 DnaB-like helicase N terminal domain M0D45_00950 PF00672 HAMP domain M0D45_00950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_00950 PF00512 His Kinase A (phospho-acceptor) domain M0D45_00950 PF01627 Hpt domain M0D45_00950 PF00072 Response regulator receiver domain M0D45_00950 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M0D45_00955 PF17674 HHH domain M0D45_00955 PF00575 S1 RNA binding domain M0D45_00955 PF16921 Tex protein YqgF-like domain M0D45_00955 PF09371 Tex-like protein N-terminal domain M0D45_00965 PF00355 Rieske [2Fe-2S] domain M0D45_00965 PF01266 FAD dependent oxidoreductase M0D45_00980 PF00561 alpha/beta hydrolase fold M0D45_00990 PF01066 CDP-alcohol phosphatidyltransferase M0D45_01010 PF03618 Kinase/pyrophosphorylase M0D45_01015 PF00391 PEP-utilising enzyme, mobile domain M0D45_01015 PF02896 PEP-utilising enzyme, TIM barrel domain M0D45_01015 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain M0D45_01020 PF00924 Mechanosensitive ion channel M0D45_01020 PF05552 Conserved TM helix M0D45_01025 PF00929 Exonuclease M0D45_01030 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M0D45_01035 PF02742 Iron dependent repressor, metal binding and dimerisation domain M0D45_01035 PF01325 Iron dependent repressor, N-terminal DNA binding domain M0D45_01040 PF01566 Natural resistance-associated macrophage protein M0D45_01045 PF00561 alpha/beta hydrolase fold M0D45_01055 PF05977 Transmembrane secretion effector M0D45_01060 PF07969 Amidohydrolase family M0D45_01070 PF00857 Isochorismatase family M0D45_01085 PF00196 Bacterial regulatory proteins, luxR family M0D45_01085 PF00072 Response regulator receiver domain M0D45_01125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D45_01125 PF03466 LysR substrate binding domain M0D45_01130 PF03466 LysR substrate binding domain M0D45_01130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D45_01135 PF03466 LysR substrate binding domain M0D45_01135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D45_01140 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus M0D45_01140 PF00361 Proton-conducting membrane transporter M0D45_01140 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M0D45_01145 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) M0D45_01155 PF00117 Glutamine amidotransferase class-I M0D45_01155 PF02540 NAD synthase M0D45_01155 PF00958 GMP synthase C terminal domain M0D45_01160 PF00478 IMP dehydrogenase / GMP reductase domain M0D45_01160 PF00571 CBS domain M0D45_01165 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain M0D45_01165 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain M0D45_01180 PF00483 Nucleotidyl transferase M0D45_01185 PF02719 Polysaccharide biosynthesis protein M0D45_01190 PF00953 Glycosyl transferase family 4 M0D45_01195 PF18073 Rubredoxin metal binding domain M0D45_01205 PF00216 Bacterial DNA-binding protein M0D45_01210 PF00575 S1 RNA binding domain M0D45_01215 PF02224 Cytidylate kinase M0D45_01220 PF00444 Ribosomal protein L36 M0D45_01230 PF04371 Porphyromonas-type peptidyl-arginine deiminase M0D45_01235 PF00795 Carbon-nitrogen hydrolase M0D45_01260 PF00528 Binding-protein-dependent transport system inner membrane component M0D45_01265 PF00528 Binding-protein-dependent transport system inner membrane component M0D45_01285 PF00356 Bacterial regulatory proteins, lacI family M0D45_01295 PF03795 YCII-related domain M0D45_01300 PF02616 Segregation and condensation protein ScpA M0D45_01305 PF04079 Segregation and condensation complex subunit ScpB M0D45_01310 PF00849 RNA pseudouridylate synthase M0D45_01310 PF01479 S4 domain M0D45_01325 PF00795 Carbon-nitrogen hydrolase M0D45_01330 PF00155 Aminotransferase class I and II M0D45_01335 PF00005 ABC transporter M0D45_01340 PF03379 CcmB protein M0D45_01345 PF01578 Cytochrome C assembly protein M0D45_01355 PF03100 CcmE M0D45_01360 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal M0D45_01360 PF01578 Cytochrome C assembly protein M0D45_01365 PF08534 Redoxin M0D45_01370 PF03918 Cytochrome C biogenesis protein M0D45_01380 PF00561 alpha/beta hydrolase fold M0D45_01385 PF00313 'Cold-shock' DNA-binding domain M0D45_01395 PF00005 ABC transporter M0D45_01395 PF00664 ABC transporter transmembrane region M0D45_01400 PF00005 ABC transporter M0D45_01400 PF00664 ABC transporter transmembrane region M0D45_01405 PF01654 Cytochrome bd terminal oxidase subunit I M0D45_01410 PF02322 Cytochrome bd terminal oxidase subunit II M0D45_01430 PF02129 X-Pro dipeptidyl-peptidase (S15 family) M0D45_01430 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain M0D45_01440 PF00171 Aldehyde dehydrogenase family M0D45_01445 PF00696 Amino acid kinase family M0D45_01445 PF01472 PUA domain M0D45_01470 PF00206 Lyase M0D45_01475 PF01118 Semialdehyde dehydrogenase, NAD binding domain M0D45_01485 PF00696 Amino acid kinase family M0D45_01485 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase M0D45_01490 PF07687 Peptidase dimerisation domain M0D45_01490 PF01546 Peptidase family M20/M25/M40 M0D45_01495 PF00764 Arginosuccinate synthase M0D45_01500 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M0D45_01500 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M0D45_01510 PF01406 tRNA synthetases class I (C) catalytic domain M0D45_01510 PF09190 DALR domain M0D45_01515 PF02657 Fe-S metabolism associated domain M0D45_01525 PF01258 Prokaryotic dksA/traR C4-type zinc finger M0D45_01535 PF01809 Putative membrane protein insertion efficiency factor M0D45_01540 PF01979 Amidohydrolase family M0D45_01545 PF01551 Peptidase family M23 M0D45_01545 PF08460 Bacterial SH3 domain M0D45_01555 PF06751 Ethanolamine ammonia lyase large subunit (EutB) M0D45_01560 PF05985 Ethanolamine ammonia-lyase light chain (EutC) M0D45_01580 PF01095 Pectinesterase M0D45_01585 PF00295 Glycosyl hydrolases family 28 M0D45_01595 PF13419 Haloacid dehalogenase-like hydrolase M0D45_01605 PF01979 Amidohydrolase family M0D45_01615 PF01132 Elongation factor P (EF-P) OB domain M0D45_01615 PF08207 Elongation factor P (EF-P) KOW-like domain M0D45_01615 PF09285 Elongation factor P, C-terminal M0D45_01620 PF04055 Radical SAM superfamily M0D45_01625 PF00563 EAL domain M0D45_01625 PF00990 Diguanylate cyclase, GGDEF domain M0D45_01625 PF03707 Bacterial signalling protein N terminal repeat M0D45_01625 PF13188 PAS domain M0D45_01640 PF00459 Inositol monophosphatase family M0D45_01645 PF02777 Iron/manganese superoxide dismutases, C-terminal domain M0D45_01645 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain M0D45_01650 PF00545 ribonuclease M0D45_01665 PF00005 ABC transporter M0D45_01665 PF12848 ABC transporter M0D45_01665 PF16326 ABC transporter C-terminal domain M0D45_01670 PF00270 DEAD/DEAH box helicase M0D45_01670 PF03880 DbpA RNA binding domain M0D45_01670 PF00271 Helicase conserved C-terminal domain M0D45_01675 PF00156 Phosphoribosyl transferase domain M0D45_01680 PF02696 Uncharacterized ACR, YdiU/UPF0061 family M0D45_01690 PF14497 Glutathione S-transferase, C-terminal domain M0D45_01690 PF02798 Glutathione S-transferase, N-terminal domain M0D45_01695 PF00313 'Cold-shock' DNA-binding domain M0D45_01700 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 M0D45_01705 PF07152 YaeQ protein M0D45_01715 PF00072 Response regulator receiver domain M0D45_01715 PF00990 Diguanylate cyclase, GGDEF domain M0D45_01715 PF00563 EAL domain M0D45_01720 PF01435 Peptidase family M48 M0D45_01725 PF00749 tRNA synthetases class I (E and Q), catalytic domain M0D45_01730 PF00106 short chain dehydrogenase M0D45_01735 PF05233 PHB accumulation regulatory domain M0D45_01735 PF07879 PHB/PHA accumulation regulator DNA-binding domain M0D45_01750 PF01119 DNA mismatch repair protein, C-terminal domain M0D45_01750 PF08676 MutL C terminal dimerisation domain M0D45_01755 PF01520 N-acetylmuramoyl-L-alanine amidase M0D45_01755 PF11741 AMIN domain M0D45_01760 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE M0D45_01765 PF03853 YjeF-related protein N-terminus M0D45_01765 PF01256 Carbohydrate kinase M0D45_01775 PF02601 Exonuclease VII, large subunit M0D45_01775 PF13742 OB-fold nucleic acid binding domain M0D45_01785 PF03781 Sulfatase-modifying factor enzyme 1 M0D45_01795 PF00570 HRDC domain M0D45_01795 PF01612 3'-5' exonuclease M0D45_01800 PF04679 ATP dependent DNA ligase C terminal region M0D45_01800 PF01068 ATP dependent DNA ligase domain M0D45_01800 PF13298 DNA polymerase Ligase (LigD) M0D45_01830 PF01584 CheW-like domain M0D45_01840 PF00270 DEAD/DEAH box helicase M0D45_01840 PF08494 DEAD/H associated M0D45_01840 PF00271 Helicase conserved C-terminal domain M0D45_01860 PF04386 Stringent starvation protein B M0D45_01865 PF02798 Glutathione S-transferase, N-terminal domain M0D45_01865 PF00043 Glutathione S-transferase, C-terminal domain M0D45_01870 PF02167 Cytochrome C1 family M0D45_01875 PF00032 Cytochrome b(C-terminal)/b6/petD M0D45_01875 PF00033 Cytochrome b/b6/petB M0D45_01880 PF00355 Rieske [2Fe-2S] domain M0D45_01880 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal M0D45_01885 PF01464 Transglycosylase SLT domain M0D45_01900 PF01938 TRAM domain M0D45_01900 PF04055 Radical SAM superfamily M0D45_01900 PF00919 Uncharacterized protein family UPF0004 M0D45_01905 PF02562 PhoH-like protein M0D45_01915 PF02130 Uncharacterized protein family UPF0054 M0D45_01925 PF00571 CBS domain M0D45_01925 PF03471 Transporter associated domain M0D45_01940 PF00171 Aldehyde dehydrogenase family M0D45_01950 PF00528 Binding-protein-dependent transport system inner membrane component M0D45_01955 PF00528 Binding-protein-dependent transport system inner membrane component M0D45_01960 PF08402 TOBE domain M0D45_01960 PF00005 ABC transporter M0D45_01965 PF02321 Outer membrane efflux protein M0D45_01970 PF07690 Major Facilitator Superfamily M0D45_01975 PF13533 Biotin-lipoyl like M0D45_01980 PF13416 Bacterial extracellular solute-binding protein M0D45_01985 PF00202 Aminotransferase class-III M0D45_01990 PF00120 Glutamine synthetase, catalytic domain M0D45_01995 PF07722 Peptidase C26 M0D45_02000 PF00120 Glutamine synthetase, catalytic domain M0D45_02005 PF01266 FAD dependent oxidoreductase M0D45_02010 PF00990 Diguanylate cyclase, GGDEF domain M0D45_02010 PF00072 Response regulator receiver domain M0D45_02015 PF00083 Sugar (and other) transporter M0D45_02015 PF07690 Major Facilitator Superfamily M0D45_02025 PF00384 Molybdopterin oxidoreductase M0D45_02030 PF02634 FdhD/NarQ family M0D45_02035 PF07690 Major Facilitator Superfamily M0D45_02040 PF00202 Aminotransferase class-III M0D45_02050 PF04286 Protein of unknown function (DUF445) M0D45_02055 PF00072 Response regulator receiver domain M0D45_02055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_02055 PF00512 His Kinase A (phospho-acceptor) domain M0D45_02055 PF01627 Hpt domain M0D45_02055 PF00672 HAMP domain M0D45_02055 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M0D45_02060 PF00072 Response regulator receiver domain M0D45_02065 PF07690 Major Facilitator Superfamily M0D45_02105 PF05088 Bacterial NAD-glutamate dehydrogenase M0D45_02115 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M0D45_02115 PF00529 HlyD membrane-fusion protein of T1SS M0D45_02120 PF00873 AcrB/AcrD/AcrF family M0D45_02125 PF00356 Bacterial regulatory proteins, lacI family M0D45_02130 PF05524 PEP-utilising enzyme, N-terminal M0D45_02130 PF00391 PEP-utilising enzyme, mobile domain M0D45_02130 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M0D45_02130 PF00381 PTS HPr component phosphorylation site M0D45_02130 PF02896 PEP-utilising enzyme, TIM barrel domain M0D45_02135 PF00294 pfkB family carbohydrate kinase M0D45_02140 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M0D45_02180 PF02355 Protein export membrane protein M0D45_02180 PF07549 SecD/SecF GG Motif M0D45_02185 PF02355 Protein export membrane protein M0D45_02185 PF13721 SecD export protein N-terminal TM region M0D45_02185 PF07549 SecD/SecF GG Motif M0D45_02190 PF02699 Preprotein translocase subunit M0D45_02195 PF01702 Queuine tRNA-ribosyltransferase M0D45_02200 PF02547 Queuosine biosynthesis protein M0D45_02210 PF00202 Aminotransferase class-III M0D45_02240 PF02927 Cellulase N-terminal ig-like domain M0D45_02240 PF00759 Glycosyl hydrolase family 9 M0D45_02255 PF00037 4Fe-4S binding domain M0D45_02265 PF01467 Cytidylyltransferase-like M0D45_02275 PF00183 Hsp90 protein M0D45_02275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_02290 PF00593 TonB dependent receptor M0D45_02290 PF07715 TonB-dependent Receptor Plug Domain M0D45_02295 PF00326 Prolyl oligopeptidase family M0D45_02295 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region M0D45_02300 PF07532 Bacterial Ig-like domain (group 4) M0D45_02305 PF07532 Bacterial Ig-like domain (group 4) M0D45_02310 PF07715 TonB-dependent Receptor Plug Domain M0D45_02310 PF00593 TonB dependent receptor M0D45_02340 PF13520 Amino acid permease M0D45_02355 PF01321 Creatinase/Prolidase N-terminal domain M0D45_02355 PF00557 Metallopeptidase family M24 M0D45_02360 PF00171 Aldehyde dehydrogenase family M0D45_02365 PF00701 Dihydrodipicolinate synthetase family M0D45_02370 PF04324 BFD-like [2Fe-2S] binding domain M0D45_02370 PF07992 Pyridine nucleotide-disulphide oxidoreductase M0D45_02380 PF01266 FAD dependent oxidoreductase M0D45_02385 PF05544 Proline racemase M0D45_02395 PF00448 SRP54-type protein, GTPase domain M0D45_02395 PF02881 SRP54-type protein, helical bundle domain M0D45_02400 PF14815 NUDIX domain M0D45_02400 PF00730 HhH-GPD superfamily base excision DNA repair protein M0D45_02400 PF00633 Helix-hairpin-helix motif M0D45_02400 PF10576 Iron-sulfur binding domain of endonuclease III M0D45_02405 PF04362 Bacterial Fe(2+) trafficking M0D45_02410 PF00072 Response regulator receiver domain M0D45_02410 PF13426 PAS domain M0D45_02410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_02415 PF00893 Small Multidrug Resistance protein M0D45_02440 PF08212 Lipocalin-like domain M0D45_02450 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M0D45_02450 PF12806 Acetyl-CoA dehydrogenase C-terminal like M0D45_02450 PF02770 Acyl-CoA dehydrogenase, middle domain M0D45_02450 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M0D45_02460 PF13292 1-deoxy-D-xylulose-5-phosphate synthase M0D45_02460 PF02779 Transketolase, pyrimidine binding domain M0D45_02460 PF02780 Transketolase, C-terminal domain M0D45_02480 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family M0D45_02490 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M0D45_02490 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M0D45_02505 PF03808 Glycosyl transferase WecB/TagA/CpsF family M0D45_02520 PF14667 Polysaccharide biosynthesis C-terminal domain M0D45_02530 PF00534 Glycosyl transferases group 1 M0D45_02530 PF13439 Glycosyltransferase Family 4 M0D45_02550 PF02397 Bacterial sugar transferase M0D45_02570 PF13411 MerR HTH family regulatory protein M0D45_02575 PF00216 Bacterial DNA-binding protein M0D45_02580 PF03483 B3/4 domain M0D45_02580 PF03484 tRNA synthetase B5 domain M0D45_02580 PF01588 Putative tRNA binding domain M0D45_02580 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain M0D45_02580 PF03147 Ferredoxin-fold anticodon binding domain M0D45_02585 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain M0D45_02585 PF01409 tRNA synthetases class II core domain (F) M0D45_02590 PF00453 Ribosomal protein L20 M0D45_02595 PF01632 Ribosomal protein L35 M0D45_02600 PF00707 Translation initiation factor IF-3, C-terminal domain M0D45_02600 PF05198 Translation initiation factor IF-3, N-terminal domain M0D45_02605 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M0D45_02605 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M0D45_02605 PF02824 TGS domain M0D45_02605 PF03129 Anticodon binding domain M0D45_02610 PF00356 Bacterial regulatory proteins, lacI family M0D45_02615 PF00686 Starch binding domain M0D45_02615 PF00128 Alpha amylase, catalytic domain M0D45_02725 PF03135 CagE, TrbE, VirB family, component of type IV transporter system M0D45_02730 PF05101 Type IV secretory pathway, VirB3-like protein M0D45_02740 PF01464 Transglycosylase SLT domain M0D45_02745 PF00437 Type II/IV secretion system protein M0D45_02750 PF03743 Bacterial conjugation TrbI-like protein M0D45_02770 PF02534 Type IV secretory system Conjugative DNA transfer M0D45_02785 PF17757 UvrB interaction domain M0D45_02785 PF04851 Type III restriction enzyme, res subunit M0D45_02785 PF02151 UvrB/uvrC motif M0D45_02785 PF00271 Helicase conserved C-terminal domain M0D45_02785 PF12344 Ultra-violet resistance protein B M0D45_02790 PF00114 Pilin (bacterial filament) M0D45_02790 PF07963 Prokaryotic N-terminal methylation motif M0D45_02800 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor M0D45_02800 PF07963 Prokaryotic N-terminal methylation motif M0D45_02805 PF05567 Neisseria PilC beta-propeller domain M0D45_02825 PF12019 Type II transport protein GspH M0D45_02825 PF07963 Prokaryotic N-terminal methylation motif M0D45_02830 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases M0D45_02830 PF03641 Possible lysine decarboxylase M0D45_02830 PF11892 Domain of unknown function (DUF3412) M0D45_02835 PF00593 TonB dependent receptor M0D45_02840 PF01914 MarC family integral membrane protein M0D45_02850 PF00462 Glutaredoxin M0D45_02855 PF02777 Iron/manganese superoxide dismutases, C-terminal domain M0D45_02855 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain M0D45_02860 PF02222 ATP-grasp domain M0D45_02860 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain M0D45_02865 PF00731 AIR carboxylase M0D45_02875 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain M0D45_02875 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain M0D45_02885 PF00575 S1 RNA binding domain M0D45_02885 PF01138 3' exoribonuclease family, domain 1 M0D45_02885 PF00013 KH domain M0D45_02885 PF03725 3' exoribonuclease family, domain 2 M0D45_02885 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain M0D45_02890 PF00312 Ribosomal protein S15 M0D45_02895 PF01509 TruB family pseudouridylate synthase (N terminal domain) M0D45_02895 PF16198 tRNA pseudouridylate synthase B C-terminal domain M0D45_02895 PF09157 Pseudouridine synthase II TruB, C-terminal M0D45_02900 PF02033 Ribosome-binding factor A M0D45_02905 PF04760 Translation initiation factor IF-2, N-terminal region M0D45_02905 PF11987 Translation-initiation factor 2 M0D45_02905 PF08364 Bacterial translation initiation factor IF-2 associated region M0D45_02905 PF00009 Elongation factor Tu GTP binding domain M0D45_02910 PF13184 NusA-like KH domain M0D45_02910 PF08529 NusA N-terminal domain M0D45_02910 PF00575 S1 RNA binding domain M0D45_02915 PF02576 RimP N-terminal domain M0D45_02915 PF17384 RimP C-terminal SH3 domain M0D45_02925 PF00361 Proton-conducting membrane transporter M0D45_02930 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus M0D45_02930 PF00361 Proton-conducting membrane transporter M0D45_02935 PF00361 Proton-conducting membrane transporter M0D45_02935 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M0D45_02940 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L M0D45_02945 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 M0D45_02950 PF12838 4Fe-4S dicluster domain M0D45_02955 PF00146 NADH dehydrogenase M0D45_02960 PF00384 Molybdopterin oxidoreductase M0D45_02960 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region M0D45_02960 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal M0D45_02965 PF10531 SLBB domain M0D45_02965 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region M0D45_02965 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit M0D45_02975 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit M0D45_02980 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit M0D45_02985 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit M0D45_02990 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 M0D45_03005 PF00121 Triosephosphate isomerase M0D45_03025 PF00563 EAL domain M0D45_03025 PF00990 Diguanylate cyclase, GGDEF domain M0D45_03025 PF03707 Bacterial signalling protein N terminal repeat M0D45_03040 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M0D45_03040 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M0D45_03040 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M0D45_03040 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M0D45_03045 PF01039 Carboxyl transferase domain M0D45_03045 PF17848 Acetyl-coA carboxylase zinc finger domain M0D45_03050 PF00290 Tryptophan synthase alpha chain M0D45_03060 PF00291 Pyridoxal-phosphate dependent enzyme M0D45_03065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D45_03065 PF03466 LysR substrate binding domain M0D45_03075 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase M0D45_03080 PF01416 tRNA pseudouridine synthase M0D45_03095 PF01118 Semialdehyde dehydrogenase, NAD binding domain M0D45_03095 PF02774 Semialdehyde dehydrogenase, dimerisation domain M0D45_03100 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M0D45_03100 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M0D45_03105 PF01264 Chorismate synthase M0D45_03110 PF05175 Methyltransferase small domain M0D45_03115 PF02630 SCO1/SenC M0D45_03120 PF02666 Phosphatidylserine decarboxylase M0D45_03130 PF05872 Bacterial protein of unknown function (DUF853) M0D45_03140 PF00293 NUDIX domain M0D45_03155 PF01272 Transcription elongation factor, GreA/GreB, C-term M0D45_03155 PF03449 Transcription elongation factor, N-terminal M0D45_03160 PF04055 Radical SAM superfamily M0D45_03160 PF18693 TRAM domain M0D45_03160 PF00919 Uncharacterized protein family UPF0004 M0D45_03165 PF01738 Dienelactone hydrolase family M0D45_03190 PF00692 dUTPase M0D45_03195 PF10609 NUBPL iron-transfer P-loop NTPase M0D45_03215 PF05649 Peptidase family M13 M0D45_03215 PF01431 Peptidase family M13 M0D45_03220 PF01431 Peptidase family M13 M0D45_03220 PF05649 Peptidase family M13 M0D45_03240 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M0D45_03240 PF07992 Pyridine nucleotide-disulphide oxidoreductase M0D45_03245 PF01266 FAD dependent oxidoreductase M0D45_03250 PF04235 Protein of unknown function (DUF418) M0D45_03255 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M0D45_03260 PF00877 NlpC/P60 family M0D45_03265 PF00877 NlpC/P60 family M0D45_03280 PF08241 Methyltransferase domain M0D45_03285 PF00375 Sodium:dicarboxylate symporter family M0D45_03290 PF00245 Alkaline phosphatase M0D45_03295 PF01171 PP-loop family M0D45_03295 PF09179 TilS substrate binding domain M0D45_03295 PF11734 TilS substrate C-terminal domain M0D45_03300 PF02609 Exonuclease VII small subunit M0D45_03305 PF00348 Polyprenyl synthetase M0D45_03310 PF14521 Lysine-specific metallo-endopeptidase M0D45_03320 PF01523 Putative modulator of DNA gyrase M0D45_03325 PF04751 Protein of unknown function (DUF615) M0D45_03330 PF01523 Putative modulator of DNA gyrase M0D45_03340 PF13502 AsmA-like C-terminal region M0D45_03340 PF13116 Protein of unknown function M0D45_03345 PF10150 Ribonuclease E/G family M0D45_03345 PF00575 S1 RNA binding domain M0D45_03350 PF02545 Maf-like protein M0D45_03355 PF04402 Protein of unknown function (DUF541) M0D45_03375 PF02590 Predicted SPOUT methyltransferase M0D45_03390 PF01467 Cytidylyltransferase-like M0D45_03405 PF08264 Anticodon-binding domain of tRNA M0D45_03405 PF13603 Leucyl-tRNA synthetase, Domain 2 M0D45_03405 PF00133 tRNA synthetases class I (I, L, M and V) M0D45_03415 PF00085 Thioredoxin M0D45_03460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D45_03460 PF03466 LysR substrate binding domain M0D45_03465 PF01022 Bacterial regulatory protein, arsR family M0D45_03495 PF00664 ABC transporter transmembrane region M0D45_03495 PF00005 ABC transporter M0D45_03505 PF00873 AcrB/AcrD/AcrF family M0D45_03515 PF06629 MltA-interacting protein MipA M0D45_03520 PF02321 Outer membrane efflux protein M0D45_03525 PF00072 Response regulator receiver domain M0D45_03525 PF00486 Transcriptional regulatory protein, C terminal M0D45_03530 PF00512 His Kinase A (phospho-acceptor) domain M0D45_03530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_03530 PF00672 HAMP domain M0D45_03535 PF00999 Sodium/hydrogen exchanger family M0D45_03540 PF07930 D-aminopeptidase, domain B M0D45_03540 PF00144 Beta-lactamase M0D45_03545 PF03737 Aldolase/RraA M0D45_03565 PF00990 Diguanylate cyclase, GGDEF domain M0D45_03570 PF00849 RNA pseudouridylate synthase M0D45_03570 PF01479 S4 domain M0D45_03575 PF08448 PAS fold M0D45_03575 PF00563 EAL domain M0D45_03575 PF00990 Diguanylate cyclase, GGDEF domain M0D45_03580 PF03880 DbpA RNA binding domain M0D45_03580 PF00270 DEAD/DEAH box helicase M0D45_03580 PF00271 Helicase conserved C-terminal domain M0D45_03585 PF04542 Sigma-70 region 2 M0D45_03585 PF04545 Sigma-70, region 4 M0D45_03585 PF04539 Sigma-70 region 3 M0D45_03630 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M0D45_03630 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M0D45_03640 PF00654 Voltage gated chloride channel M0D45_03655 PF00593 TonB dependent receptor M0D45_03655 PF07715 TonB-dependent Receptor Plug Domain M0D45_03665 PF00082 Subtilase family M0D45_03665 PF01483 Proprotein convertase P-domain M0D45_03675 PF00248 Aldo/keto reductase family M0D45_03680 PF07690 Major Facilitator Superfamily M0D45_03685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D45_03685 PF03466 LysR substrate binding domain M0D45_03700 PF06719 AraC-type transcriptional regulator N-terminus M0D45_03700 PF12833 Helix-turn-helix domain M0D45_03710 PF16859 Tetracyclin repressor-like, C-terminal domain M0D45_03710 PF00440 Bacterial regulatory proteins, tetR family M0D45_03715 PF02321 Outer membrane efflux protein M0D45_03720 PF00873 AcrB/AcrD/AcrF family M0D45_03725 PF00529 HlyD membrane-fusion protein of T1SS M0D45_03725 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M0D45_03735 PF01475 Ferric uptake regulator family M0D45_03740 PF00749 tRNA synthetases class I (E and Q), catalytic domain M0D45_03750 PF00795 Carbon-nitrogen hydrolase M0D45_03765 PF06123 Inner membrane protein CreD M0D45_03775 PF00672 HAMP domain M0D45_03775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_03775 PF00512 His Kinase A (phospho-acceptor) domain M0D45_03785 PF00072 Response regulator receiver domain M0D45_03785 PF00486 Transcriptional regulatory protein, C terminal M0D45_03790 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ M0D45_03800 PF02559 CarD-like/TRCF domain M0D45_03800 PF00270 DEAD/DEAH box helicase M0D45_03800 PF00271 Helicase conserved C-terminal domain M0D45_03800 PF03461 TRCF domain M0D45_03800 PF17757 UvrB interaction domain M0D45_03805 PF01740 STAS domain M0D45_03810 PF01627 Hpt domain M0D45_03810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_03810 PF01584 CheW-like domain M0D45_03810 PF02895 Signal transducing histidine kinase, homodimeric domain M0D45_03810 PF09078 CheY binding M0D45_03815 PF00672 HAMP domain M0D45_03815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D45_03820 PF01584 CheW-like domain M0D45_03825 PF00563 EAL domain M0D45_03825 PF00990 Diguanylate cyclase, GGDEF domain M0D45_03825 PF13426 PAS domain M0D45_03830 PF01739 CheR methyltransferase, SAM binding domain M0D45_03830 PF03705 CheR methyltransferase, all-alpha domain M0D45_03835 PF01339 CheB methylesterase M0D45_03835 PF00072 Response regulator receiver domain M0D45_03840 PF13091 PLD-like domain M0D45_03845 PF01431 Peptidase family M13 M0D45_03845 PF05649 Peptidase family M13 M0D45_03855 PF00300 Histidine phosphatase superfamily (branch 1) M0D45_03860 PF04493 Endonuclease V M0D45_03880 PF02678 Pirin M0D45_03880 PF05726 Pirin C-terminal cupin domain M0D45_03885 PF13722 5TM C-terminal transporter carbon starvation CstA M0D45_03885 PF02554 Carbon starvation protein CstA M0D45_03890 PF04328 Selenoprotein, putative M0D45_03925 PF13478 XdhC Rossmann domain M0D45_03925 PF02625 XdhC and CoxI family M0D45_03930 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain M0D45_03930 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase M0D45_03935 PF00941 FAD binding domain in molybdopterin dehydrogenase M0D45_03935 PF03450 CO dehydrogenase flavoprotein C-terminal domain M0D45_03940 PF10518 TAT (twin-arginine translocation) pathway signal sequence M0D45_03940 PF01799 [2Fe-2S] binding domain M0D45_03940 PF00111 2Fe-2S iron-sulfur cluster binding domain M0D45_03945 PF00107 Zinc-binding dehydrogenase M0D45_03945 PF08240 Alcohol dehydrogenase GroES-like domain M0D45_03950 PF00990 Diguanylate cyclase, GGDEF domain M0D45_03950 PF01590 GAF domain M0D45_03950 PF00563 EAL domain M0D45_03950 PF00360 Phytochrome region M0D45_03955 PF00356 Bacterial regulatory proteins, lacI family M0D45_03965 PF03825 Nucleoside H+ symporter M0D45_03970 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M0D45_03970 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M0D45_04000 PF00732 GMC oxidoreductase M0D45_04000 PF05199 GMC oxidoreductase M0D45_04015 PF00436 Single-strand binding protein family M0D45_04020 PF00348 Polyprenyl synthetase M0D45_04030 PF08245 Mur ligase middle domain M0D45_04045 PF01842 ACT domain M0D45_04045 PF00696 Amino acid kinase family M0D45_04050 PF02567 Phenazine biosynthesis-like protein M0D45_04055 PF02567 Phenazine biosynthesis-like protein M0D45_04065 PF02566 OsmC-like protein M0D45_04070 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M0D45_04070 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M0D45_04075 PF03652 Holliday junction resolvase M0D45_04080 PF02622 Uncharacterized ACR, COG1678 M0D45_04085 PF13687 Domain of unknown function (DUF4153) M0D45_04090 PF00958 GMP synthase C terminal domain M0D45_04090 PF00117 Glutamine amidotransferase class-I M0D45_04090 PF03352 Methyladenine glycosylase M0D45_04090 PF13302 Acetyltransferase (GNAT) domain M0D45_04090 PF13673 Acetyltransferase (GNAT) domain M0D45_04105 PF00437 Type II/IV secretion system protein M0D45_04110 PF00437 Type II/IV secretion system protein M0D45_04115 PF01168 Alanine racemase, N-terminal domain M0D45_04120 PF03807 NADP oxidoreductase coenzyme F420-dependent M0D45_04120 PF14748 Pyrroline-5-carboxylate reductase dimerisation M0D45_04130 PF01476 LysM domain M0D45_04130 PF01551 Peptidase family M23 M0D45_04150 PF01965 DJ-1/PfpI family M0D45_04160 PF02082 Transcriptional regulator M0D45_04170 PF00005 ABC transporter M0D45_04175 PF01458 Uncharacterized protein family (UPF0051) M0D45_04180 PF00266 Aminotransferase class-V M0D45_04190 PF00355 Rieske [2Fe-2S] domain M0D45_04195 PF00593 TonB dependent receptor M0D45_04195 PF07715 TonB-dependent Receptor Plug Domain M0D45_04200 PF13640 2OG-Fe(II) oxygenase superfamily M0D45_04200 PF18331 PKHD-type hydroxylase C-terminal domain M0D45_04230 PF02424 ApbE family M0D45_04235 PF00667 FAD binding domain M0D45_04235 PF00258 Flavodoxin M0D45_04235 PF00175 Oxidoreductase NAD-binding domain M0D45_04250 PF07687 Peptidase dimerisation domain M0D45_04250 PF01546 Peptidase family M20/M25/M40 M0D45_04260 PF01636 Phosphotransferase enzyme family M0D45_04265 PF00483 Nucleotidyl transferase M0D45_04270 PF00308 Bacterial dnaA protein M0D45_04275 PF01594 AI-2E family transporter M0D45_04285 PF00586 AIR synthase related protein, N-terminal domain M0D45_04285 PF02769 AIR synthase related protein, C-terminal domain M0D45_04295 PF00551 Formyl transferase M0D45_04315 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M0D45_04320 PF01722 BolA-like protein M0D45_04325 PF00571 CBS domain M0D45_04325 PF01380 SIS domain M0D45_04340 PF03968 OstA-like protein M0D45_04345 PF00005 ABC transporter M0D45_04350 PF00309 Sigma-54 factor, Activator interacting domain (AID) M0D45_04350 PF04963 Sigma-54 factor, core binding domain M0D45_04350 PF04552 Sigma-54, DNA binding domain M0D45_04355 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein M0D45_04360 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M0D45_04365 PF07475 HPr Serine kinase C-terminal domain M0D45_04365 PF02603 HPr Serine kinase N terminus M0D45_04370 PF03668 P-loop ATPase protein family M0D45_04380 PF00381 PTS HPr component phosphorylation site M0D45_04385 PF00391 PEP-utilising enzyme, mobile domain M0D45_04385 PF02896 PEP-utilising enzyme, TIM barrel domain M0D45_04385 PF05524 PEP-utilising enzyme, N-terminal M0D45_04390 PF01769 Divalent cation transporter M0D45_04390 PF03448 MgtE intracellular N domain M0D45_04390 PF00571 CBS domain M0D45_04395 PF00756 Putative esterase M0D45_04400 PF02322 Cytochrome bd terminal oxidase subunit II M0D45_04405 PF01654 Cytochrome bd terminal oxidase subunit I M0D45_04415 PF00324 Amino acid permease M0D45_04420 PF00544 Pectate lyase M0D45_04425 PF00561 alpha/beta hydrolase fold M0D45_04435 PF00324 Amino acid permease M0D45_04455 PF12706 Beta-lactamase superfamily domain M0D45_04460 PF04820 Tryptophan halogenase M0D45_04490 PF00376 MerR family regulatory protein M0D45_04490 PF09278 MerR, DNA binding M0D45_04495 PF07690 Major Facilitator Superfamily M0D45_04500 PF03738 Glutathionylspermidine synthase preATP-grasp M0D45_04525 PF04012 PspA/IM30 family M0D45_04535 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region M0D45_04535 PF01243 Pyridoxamine 5'-phosphate oxidase M0D45_04540 PF01202 Shikimate kinase M0D45_04545 PF01761 3-dehydroquinate synthase M0D45_04555 PF01208 Uroporphyrinogen decarboxylase (URO-D) M0D45_04625 PF02954 Bacterial regulatory protein, Fis family M0D45_04625 PF00072 Response regulator receiver domain M0D45_04625 PF00158 Sigma-54 interaction domain M0D45_04630 PF07690 Major Facilitator Superfamily M0D45_04635 PF17149 Periplasmic sensor domain found in signal transduction proteins M0D45_04635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_04635 PF00512 His Kinase A (phospho-acceptor) domain M0D45_04635 PF01627 Hpt domain M0D45_04635 PF00072 Response regulator receiver domain M0D45_04635 PF00672 HAMP domain M0D45_04640 PF00072 Response regulator receiver domain M0D45_04640 PF09456 RcsC Alpha-Beta-Loop (ABL) M0D45_04640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_04640 PF00512 His Kinase A (phospho-acceptor) domain M0D45_04645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_04645 PF00512 His Kinase A (phospho-acceptor) domain M0D45_04645 PF09308 LuxQ, periplasmic M0D45_04645 PF00072 Response regulator receiver domain M0D45_04650 PF00072 Response regulator receiver domain M0D45_04650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_04650 PF00512 His Kinase A (phospho-acceptor) domain M0D45_04650 PF01627 Hpt domain M0D45_04655 PF04264 YceI-like domain M0D45_04675 PF03313 Serine dehydratase alpha chain M0D45_04675 PF03315 Serine dehydratase beta chain M0D45_04680 PF12697 Alpha/beta hydrolase family M0D45_04685 PF00696 Amino acid kinase family M0D45_04685 PF00742 Homoserine dehydrogenase M0D45_04685 PF03447 Homoserine dehydrogenase, NAD binding domain M0D45_04690 PF01053 Cys/Met metabolism PLP-dependent enzyme M0D45_04695 PF00561 alpha/beta hydrolase fold M0D45_04700 PF01476 LysM domain M0D45_04700 PF08525 Opacity-associated protein A N-terminal motif M0D45_04700 PF01551 Peptidase family M23 M0D45_04705 PF00009 Elongation factor Tu GTP binding domain M0D45_04705 PF16658 Class II release factor RF3, C-terminal domain M0D45_04710 PF03006 Haemolysin-III related M0D45_04715 PF05170 AsmA family M0D45_04720 PF00571 CBS domain M0D45_04720 PF00478 IMP dehydrogenase / GMP reductase domain M0D45_04725 PF00535 Glycosyl transferase family 2 M0D45_04730 PF00912 Transglycosylase M0D45_04735 PF01430 Hsp33 protein M0D45_04745 PF07715 TonB-dependent Receptor Plug Domain M0D45_04745 PF00593 TonB dependent receptor M0D45_04750 PF00440 Bacterial regulatory proteins, tetR family M0D45_04755 PF00561 alpha/beta hydrolase fold M0D45_04760 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M0D45_04760 PF02770 Acyl-CoA dehydrogenase, middle domain M0D45_04760 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M0D45_04760 PF09317 Domain of unknown function (DUF1974) M0D45_04785 PF01597 Glycine cleavage H-protein M0D45_04790 PF01571 Aminomethyltransferase folate-binding domain M0D45_04790 PF08669 Glycine cleavage T-protein C-terminal barrel domain M0D45_04800 PF01145 SPFH domain / Band 7 family M0D45_04800 PF16200 C-terminal region of band_7 M0D45_04805 PF02694 Uncharacterised BCR, YnfA/UPF0060 family M0D45_04810 PF03819 MazG nucleotide pyrophosphohydrolase domain M0D45_04815 PF00459 Inositol monophosphatase family M0D45_04820 PF00293 NUDIX domain M0D45_04825 PF00202 Aminotransferase class-III M0D45_04830 PF04452 RNA methyltransferase M0D45_04835 PF02685 Glucokinase M0D45_04850 PF00704 Glycosyl hydrolases family 18 M0D45_04850 PF01476 LysM domain M0D45_04860 PF00728 Glycosyl hydrolase family 20, catalytic domain M0D45_04860 PF02838 Glycosyl hydrolase family 20, domain 2 M0D45_04860 PF07691 PA14 domain M0D45_04870 PF14310 Fibronectin type III-like domain M0D45_04870 PF07691 PA14 domain M0D45_04870 PF01915 Glycosyl hydrolase family 3 C-terminal domain M0D45_04870 PF00933 Glycosyl hydrolase family 3 N terminal domain M0D45_04880 PF01301 Glycosyl hydrolases family 35 M0D45_04885 PF13520 Amino acid permease M0D45_04895 PF11975 Family 4 glycosyl hydrolase C-terminal domain M0D45_04895 PF02056 Family 4 glycosyl hydrolase M0D45_04905 PF07971 Glycosyl hydrolase family 92 M0D45_04905 PF17678 Glycosyl hydrolase family 92 N-terminal domain M0D45_04910 PF01301 Glycosyl hydrolases family 35 M0D45_04940 PF03932 CutC family M0D45_04945 PF01112 Asparaginase M0D45_04950 PF12034 Domain of unknown function (DUF3520) M0D45_04950 PF00092 von Willebrand factor type A domain M0D45_04950 PF12450 von Willebrand factor M0D45_04955 PF08281 Sigma-70, region 4 M0D45_04955 PF04542 Sigma-70 region 2 M0D45_04965 PF13302 Acetyltransferase (GNAT) domain M0D45_04980 PF01584 CheW-like domain M0D45_04980 PF02895 Signal transducing histidine kinase, homodimeric domain M0D45_04980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_04980 PF01627 Hpt domain M0D45_04980 PF00072 Response regulator receiver domain M0D45_04985 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term M0D45_04985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D45_04990 PF01584 CheW-like domain M0D45_04995 PF00072 Response regulator receiver domain M0D45_05000 PF00072 Response regulator receiver domain M0D45_05005 PF02951 Prokaryotic glutathione synthetase, N-terminal domain M0D45_05005 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain M0D45_05015 PF03747 ADP-ribosylglycohydrolase M0D45_05020 PF00814 Glycoprotease family M0D45_05025 PF13307 Helicase C-terminal domain M0D45_05025 PF04851 Type III restriction enzyme, res subunit M0D45_05035 PF14814 Bifunctional transglycosylase second domain M0D45_05035 PF00912 Transglycosylase M0D45_05035 PF00905 Penicillin binding protein transpeptidase domain M0D45_05040 PF00535 Glycosyl transferase family 2 M0D45_05050 PF02824 TGS domain M0D45_05050 PF13291 ACT domain M0D45_05050 PF04607 Region found in RelA / SpoT proteins M0D45_05055 PF08042 PqqA family M0D45_05060 PF12706 Beta-lactamase superfamily domain M0D45_05065 PF03070 TENA/THI-4/PQQC family M0D45_05070 PF05402 Coenzyme PQQ synthesis protein D (PqqD) M0D45_05075 PF13186 Iron-sulfur cluster-binding domain M0D45_05075 PF04055 Radical SAM superfamily M0D45_05105 PF00270 DEAD/DEAH box helicase M0D45_05105 PF00271 Helicase conserved C-terminal domain M0D45_05105 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold M0D45_05105 PF11898 Domain of unknown function (DUF3418) M0D45_05105 PF04408 Helicase associated domain (HA2) M0D45_05110 PF00210 Ferritin-like domain M0D45_05115 PF16124 RecQ zinc-binding M0D45_05115 PF09382 RQC domain M0D45_05115 PF00270 DEAD/DEAH box helicase M0D45_05115 PF00570 HRDC domain M0D45_05115 PF00271 Helicase conserved C-terminal domain M0D45_05135 PF00849 RNA pseudouridylate synthase M0D45_05135 PF01479 S4 domain M0D45_05145 PF00672 HAMP domain M0D45_05145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D45_05145 PF02203 Tar ligand binding domain homologue M0D45_05155 PF01810 LysE type translocator M0D45_05160 PF03466 LysR substrate binding domain M0D45_05160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D45_05175 PF06508 Queuosine biosynthesis protein QueC M0D45_05185 PF04055 Radical SAM superfamily M0D45_05195 PF00691 OmpA family M0D45_05200 PF07676 WD40-like Beta Propeller Repeat M0D45_05200 PF04052 TolB amino-terminal domain M0D45_05210 PF02472 Biopolymer transport protein ExbD/TolR M0D45_05215 PF01618 MotA/TolQ/ExbB proton channel family M0D45_05220 PF03061 Thioesterase superfamily M0D45_05225 PF17864 RuvB AAA lid domain M0D45_05225 PF05496 Holliday junction DNA helicase RuvB P-loop domain M0D45_05225 PF05491 RuvB C-terminal winged helix domain M0D45_05235 PF02705 K+ potassium transporter M0D45_05240 PF07499 RuvA, C-terminal domain M0D45_05240 PF01330 RuvA N terminal domain M0D45_05245 PF02075 Crossover junction endodeoxyribonuclease RuvC M0D45_05250 PF01709 Transcriptional regulator M0D45_05265 PF02938 GAD domain M0D45_05265 PF01336 OB-fold nucleic acid binding domain M0D45_05265 PF00152 tRNA synthetases class II (D, K and N) M0D45_05280 PF07690 Major Facilitator Superfamily M0D45_05290 PF05506 Domain of unknown function (DUF756) M0D45_05290 PF04185 Phosphoesterase family M0D45_05310 PF03466 LysR substrate binding domain M0D45_05310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D45_05320 PF12848 ABC transporter M0D45_05320 PF00005 ABC transporter M0D45_05325 PF00593 TonB dependent receptor M0D45_05325 PF07715 TonB-dependent Receptor Plug Domain M0D45_05340 PF00593 TonB dependent receptor M0D45_05340 PF07715 TonB-dependent Receptor Plug Domain M0D45_05345 PF00593 TonB dependent receptor M0D45_05345 PF07715 TonB-dependent Receptor Plug Domain M0D45_05350 PF02254 TrkA-N domain M0D45_05350 PF00999 Sodium/hydrogen exchanger family M0D45_05370 PF03328 HpcH/HpaI aldolase/citrate lyase family M0D45_05375 PF00593 TonB dependent receptor M0D45_05375 PF07715 TonB-dependent Receptor Plug Domain M0D45_05375 PF07660 Secretin and TonB N terminus short domain M0D45_05385 PF04183 IucA / IucC family M0D45_05385 PF06276 Ferric iron reductase FhuF-like transporter M0D45_05390 PF07690 Major Facilitator Superfamily M0D45_05395 PF04183 IucA / IucC family M0D45_05395 PF06276 Ferric iron reductase FhuF-like transporter M0D45_05400 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain M0D45_05400 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain M0D45_05420 PF02654 Cobalamin-5-phosphate synthase M0D45_05430 PF02277 Phosphoribosyltransferase M0D45_05435 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase M0D45_05440 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain M0D45_05440 PF07685 CobB/CobQ-like glutamine amidotransferase domain M0D45_05445 PF00155 Aminotransferase class I and II M0D45_05450 PF03186 CobD/Cbib protein M0D45_05450 PF17113 Regulatory signalling modulator protein AmpE M0D45_05455 PF12557 Cob(I)alamin adenosyltransferase N terminal M0D45_05455 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP M0D45_05475 PF07715 TonB-dependent Receptor Plug Domain M0D45_05475 PF00593 TonB dependent receptor M0D45_05485 PF02861 Clp amino terminal domain, pathogenicity island component M0D45_05485 PF17871 AAA lid domain M0D45_05485 PF07724 AAA domain (Cdc48 subfamily) M0D45_05485 PF00004 ATPase family associated with various cellular activities (AAA) M0D45_05485 PF10431 C-terminal, D2-small domain, of ClpB protein M0D45_05490 PF01541 GIY-YIG catalytic domain M0D45_05515 PF03466 LysR substrate binding domain M0D45_05515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D45_05530 PF00593 TonB dependent receptor M0D45_05530 PF07715 TonB-dependent Receptor Plug Domain M0D45_05535 PF02358 Trehalose-phosphatase M0D45_05540 PF00723 Glycosyl hydrolases family 15 M0D45_05545 PF00982 Glycosyltransferase family 20 M0D45_05550 PF01011 PQQ enzyme repeat M0D45_05555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D45_05555 PF02203 Tar ligand binding domain homologue M0D45_05555 PF00672 HAMP domain M0D45_05560 PF04134 Protein of unknown function, DUF393 M0D45_05570 PF02578 Multi-copper polyphenol oxidoreductase laccase M0D45_05575 PF00849 RNA pseudouridylate synthase M0D45_05580 PF13525 Outer membrane lipoprotein M0D45_05585 PF01230 HIT domain M0D45_05590 PF00795 Carbon-nitrogen hydrolase M0D45_05590 PF02540 NAD synthase M0D45_05600 PF00549 CoA-ligase M0D45_05600 PF02629 CoA binding domain M0D45_05605 PF00549 CoA-ligase M0D45_05605 PF08442 ATP-grasp domain M0D45_05610 PF00512 His Kinase A (phospho-acceptor) domain M0D45_05610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_05615 PF00072 Response regulator receiver domain M0D45_05615 PF02954 Bacterial regulatory protein, Fis family M0D45_05615 PF00158 Sigma-54 interaction domain M0D45_05620 PF00437 Type II/IV secretion system protein M0D45_05620 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M0D45_05625 PF00437 Type II/IV secretion system protein M0D45_05625 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M0D45_05645 PF00893 Small Multidrug Resistance protein M0D45_05660 PF00482 Type II secretion system (T2SS), protein F M0D45_05665 PF01478 Type IV leader peptidase family M0D45_05665 PF06750 Bacterial Peptidase A24 N-terminal domain M0D45_05670 PF01121 Dephospho-CoA kinase M0D45_05675 PF03527 RHS protein M0D45_05675 PF05593 RHS Repeat M0D45_05700 PF00512 His Kinase A (phospho-acceptor) domain M0D45_05700 PF00989 PAS fold M0D45_05700 PF11808 Phosphate regulon sensor protein PhoR M0D45_05700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_05705 PF00072 Response regulator receiver domain M0D45_05705 PF00486 Transcriptional regulatory protein, C terminal M0D45_05715 PF08443 RimK-like ATP-grasp domain M0D45_05715 PF18030 RimK PreATP-grasp domain M0D45_05720 PF00128 Alpha amylase, catalytic domain M0D45_05720 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) M0D45_05790 PF13333 Integrase core domain M0D45_05790 PF00665 Integrase core domain M0D45_05790 PF13276 HTH-like domain M0D45_05805 PF04002 RadC-like JAB domain M0D45_05820 PF00069 Protein kinase domain M0D45_05880 PF03797 Autotransporter beta-domain M0D45_05880 PF00657 GDSL-like Lipase/Acylhydrolase M0D45_05890 PF05690 Thiazole biosynthesis protein ThiG M0D45_05895 PF02390 Putative methyltransferase M0D45_05900 PF03600 Citrate transporter M0D45_05900 PF02080 TrkA-C domain M0D45_05915 PF01557 Fumarylacetoacetate (FAA) hydrolase family M0D45_05920 PF01741 Large-conductance mechanosensitive channel, MscL M0D45_05930 PF00356 Bacterial regulatory proteins, lacI family M0D45_05950 PF16355 Domain of unknown function (DUF4982) M0D45_05950 PF02837 Glycosyl hydrolases family 2, sugar binding domain M0D45_05950 PF02836 Glycosyl hydrolases family 2, TIM barrel domain M0D45_05950 PF00703 Glycosyl hydrolases family 2 M0D45_05950 PF13287 Fn3 associated M0D45_05955 PF10566 Glycoside hydrolase 97 M0D45_05955 PF14508 Glycosyl-hydrolase 97 N-terminal M0D45_05955 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation M0D45_05960 PF00135 Carboxylesterase family M0D45_05965 PF00588 SpoU rRNA Methylase family M0D45_05965 PF08032 RNA 2'-O ribose methyltransferase substrate binding M0D45_05975 PF11838 ERAP1-like C-terminal domain M0D45_05975 PF01433 Peptidase family M1 domain M0D45_05990 PF00873 AcrB/AcrD/AcrF family M0D45_05995 PF00529 HlyD membrane-fusion protein of T1SS M0D45_05995 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M0D45_06000 PF00009 Elongation factor Tu GTP binding domain M0D45_06005 PF01507 Phosphoadenosine phosphosulfate reductase family M0D45_06010 PF00667 FAD binding domain M0D45_06010 PF00175 Oxidoreductase NAD-binding domain M0D45_06010 PF00258 Flavodoxin M0D45_06015 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M0D45_06015 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M0D45_06020 PF01507 Phosphoadenosine phosphosulfate reductase family M0D45_06040 PF00072 Response regulator receiver domain M0D45_06040 PF00672 HAMP domain M0D45_06040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_06040 PF00512 His Kinase A (phospho-acceptor) domain M0D45_06040 PF01627 Hpt domain M0D45_06050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D45_06050 PF03466 LysR substrate binding domain M0D45_06055 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M0D45_06055 PF10414 Sirohaem synthase dimerisation region M0D45_06055 PF14824 Sirohaem biosynthesis protein central M0D45_06060 PF00291 Pyridoxal-phosphate dependent enzyme M0D45_06075 PF01661 Macro domain M0D45_06080 PF00274 Fructose-bisphosphate aldolase class-I M0D45_06085 PF02887 Pyruvate kinase, alpha/beta domain M0D45_06085 PF00224 Pyruvate kinase, barrel domain M0D45_06090 PF13419 Haloacid dehalogenase-like hydrolase M0D45_06095 PF00162 Phosphoglycerate kinase M0D45_06115 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M0D45_06115 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M0D45_06125 PF03922 OmpW family M0D45_06135 PF04273 Putative phosphatase (DUF442) M0D45_06135 PF00753 Metallo-beta-lactamase superfamily M0D45_06145 PF00528 Binding-protein-dependent transport system inner membrane component M0D45_06150 PF00005 ABC transporter M0D45_06150 PF03459 TOBE domain M0D45_06170 PF00512 His Kinase A (phospho-acceptor) domain M0D45_06170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_06170 PF08521 Two-component sensor kinase N-terminal M0D45_06175 PF00486 Transcriptional regulatory protein, C terminal M0D45_06175 PF00072 Response regulator receiver domain M0D45_06195 PF00501 AMP-binding enzyme M0D45_06220 PF03734 L,D-transpeptidase catalytic domain M0D45_06220 PF01476 LysM domain M0D45_06225 PF04225 Opacity-associated protein A LysM-like domain M0D45_06225 PF01551 Peptidase family M23 M0D45_06235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D45_06235 PF03466 LysR substrate binding domain M0D45_06240 PF07715 TonB-dependent Receptor Plug Domain M0D45_06240 PF00593 TonB dependent receptor M0D45_06245 PF02779 Transketolase, pyrimidine binding domain M0D45_06245 PF02780 Transketolase, C-terminal domain M0D45_06245 PF00456 Transketolase, thiamine diphosphate binding domain M0D45_06250 PF00375 Sodium:dicarboxylate symporter family M0D45_06260 PF07584 Aerotolerance regulator N-terminal M0D45_06260 PF00092 von Willebrand factor type A domain M0D45_06280 PF07726 ATPase family associated with various cellular activities (AAA) M0D45_06280 PF17863 AAA lid domain M0D45_06285 PF11741 AMIN domain M0D45_06285 PF00263 Bacterial type II and III secretion system protein M0D45_06285 PF03958 Bacterial type II/III secretion system short domain M0D45_06285 PF07660 Secretin and TonB N terminus short domain M0D45_06290 PF04351 Pilus assembly protein, PilP M0D45_06295 PF04350 Pilus assembly protein, PilO M0D45_06300 PF05137 Fimbrial assembly protein (PilN) M0D45_06305 PF11104 Type IV pilus assembly protein PilM; M0D45_06310 PF17092 Penicillin-binding protein OB-like domain M0D45_06310 PF00905 Penicillin binding protein transpeptidase domain M0D45_06310 PF00912 Transglycosylase M0D45_06325 PF00285 Citrate synthase, C-terminal domain M0D45_06330 PF01197 Ribosomal protein L31 M0D45_06335 PF01156 Inosine-uridine preferring nucleoside hydrolase M0D45_06340 PF00270 DEAD/DEAH box helicase M0D45_06340 PF00271 Helicase conserved C-terminal domain M0D45_06340 PF17191 RecG wedge domain M0D45_06345 PF01042 Endoribonuclease L-PSP M0D45_06350 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus M0D45_06350 PF08666 SAF domain M0D45_06355 PF03573 outer membrane porin, OprD family M0D45_06360 PF13378 Enolase C-terminal domain-like M0D45_06360 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M0D45_06365 PF07690 Major Facilitator Superfamily M0D45_06370 PF00171 Aldehyde dehydrogenase family M0D45_06375 PF00701 Dihydrodipicolinate synthetase family M0D45_06380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D45_06380 PF03466 LysR substrate binding domain M0D45_06390 PF13291 ACT domain M0D45_06390 PF04607 Region found in RelA / SpoT proteins M0D45_06390 PF02824 TGS domain M0D45_06400 PF04198 Putative sugar-binding domain M0D45_06410 PF04966 Carbohydrate-selective porin, OprB family M0D45_06415 PF00528 Binding-protein-dependent transport system inner membrane component M0D45_06420 PF00528 Binding-protein-dependent transport system inner membrane component M0D45_06425 PF00005 ABC transporter M0D45_06425 PF08402 TOBE domain M0D45_06435 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M0D45_06435 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M0D45_06440 PF01192 RNA polymerase Rpb6 M0D45_06445 PF00625 Guanylate kinase M0D45_06450 PF08340 Domain of unknown function (DUF1732) M0D45_06450 PF03755 YicC-like family, N-terminal region M0D45_06455 PF03725 3' exoribonuclease family, domain 2 M0D45_06455 PF01138 3' exoribonuclease family, domain 1 M0D45_06465 PF01725 Ham1 family M0D45_06470 PF06969 HemN C-terminal domain M0D45_06470 PF04055 Radical SAM superfamily M0D45_06485 PF00557 Metallopeptidase family M24 M0D45_06495 PF05195 Aminopeptidase P, N-terminal domain M0D45_06495 PF00557 Metallopeptidase family M24 M0D45_06500 PF03695 Uncharacterised protein family (UPF0149) M0D45_06510 PF05164 Cell division protein ZapA M0D45_06520 PF01812 5-formyltetrahydrofolate cyclo-ligase family M0D45_06530 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) M0D45_06540 PF13369 Transglutaminase-like superfamily M0D45_06545 PF00301 Rubredoxin M0D45_06550 PF02581 Thiamine monophosphate synthase M0D45_06565 PF00202 Aminotransferase class-III M0D45_06570 PF00196 Bacterial regulatory proteins, luxR family M0D45_06570 PF17874 MalT-like TPR region M0D45_06580 PF00127 Copper binding proteins, plastocyanin/azurin family M0D45_06585 PF00155 Aminotransferase class I and II M0D45_06595 PF00034 Cytochrome c M0D45_06595 PF13442 Cytochrome C oxidase, cbb3-type, subunit III M0D45_06600 PF01593 Flavin containing amine oxidoreductase M0D45_06615 PF00202 Aminotransferase class-III M0D45_06640 PF01569 PAP2 superfamily M0D45_06645 PF01062 Bestrophin, RFP-TM, chloride channel M0D45_06655 PF08245 Mur ligase middle domain M0D45_06655 PF02875 Mur ligase family, glutamate ligase domain M0D45_06655 PF01225 Mur ligase family, catalytic domain M0D45_06665 PF00365 Phosphofructokinase M0D45_06690 PF03030 Inorganic H+ pyrophosphatase M0D45_06700 PF00719 Inorganic pyrophosphatase M0D45_06710 PF07715 TonB-dependent Receptor Plug Domain M0D45_06710 PF00593 TonB dependent receptor M0D45_06715 PF12833 Helix-turn-helix domain M0D45_06720 PF18500 CadC C-terminal domain 1 M0D45_06720 PF00486 Transcriptional regulatory protein, C terminal M0D45_06725 PF13667 ThiC-associated domain M0D45_06725 PF01964 Radical SAM ThiC family M0D45_06730 PF00326 Prolyl oligopeptidase family M0D45_06730 PF07676 WD40-like Beta Propeller Repeat M0D45_06735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D45_06735 PF00672 HAMP domain M0D45_06745 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain M0D45_06745 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain M0D45_06750 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M0D45_06750 PF00205 Thiamine pyrophosphate enzyme, central domain M0D45_06750 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M0D45_06760 PF00291 Pyridoxal-phosphate dependent enzyme M0D45_06765 PF00682 HMGL-like M0D45_06765 PF08502 LeuA allosteric (dimerisation) domain M0D45_06770 PF00180 Isocitrate/isopropylmalate dehydrogenase M0D45_06780 PF00694 Aconitase C-terminal domain M0D45_06785 PF00330 Aconitase family (aconitate hydratase) M0D45_06790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D45_06795 PF00990 Diguanylate cyclase, GGDEF domain M0D45_06810 PF02321 Outer membrane efflux protein M0D45_06815 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) M0D45_06820 PF03279 Bacterial lipid A biosynthesis acyltransferase M0D45_06845 PF00005 ABC transporter M0D45_06845 PF03412 Peptidase C39 family M0D45_06845 PF00664 ABC transporter transmembrane region M0D45_06875 PF00665 Integrase core domain M0D45_06875 PF13333 Integrase core domain M0D45_06875 PF13276 HTH-like domain M0D45_06905 PF00390 Malic enzyme, N-terminal domain M0D45_06905 PF03949 Malic enzyme, NAD binding domain M0D45_06905 PF01515 Phosphate acetyl/butaryl transferase M0D45_06910 PF00375 Sodium:dicarboxylate symporter family M0D45_06925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_06925 PF00512 His Kinase A (phospho-acceptor) domain M0D45_06930 PF07690 Major Facilitator Superfamily M0D45_06940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D45_06940 PF03466 LysR substrate binding domain M0D45_06945 PF00248 Aldo/keto reductase family M0D45_06965 PF00196 Bacterial regulatory proteins, luxR family M0D45_06965 PF00072 Response regulator receiver domain M0D45_06975 PF08521 Two-component sensor kinase N-terminal M0D45_06975 PF00512 His Kinase A (phospho-acceptor) domain M0D45_06975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_06980 PF00072 Response regulator receiver domain M0D45_06980 PF00486 Transcriptional regulatory protein, C terminal M0D45_06990 PF03600 Citrate transporter M0D45_06995 PF00106 short chain dehydrogenase M0D45_07000 PF00356 Bacterial regulatory proteins, lacI family M0D45_07015 PF00128 Alpha amylase, catalytic domain M0D45_07035 PF03193 RsgA GTPase M0D45_07040 PF00155 Aminotransferase class I and II M0D45_07055 PF01522 Polysaccharide deacetylase M0D45_07060 PF00462 Glutaredoxin M0D45_07075 PF01979 Amidohydrolase family M0D45_07080 PF01979 Amidohydrolase family M0D45_07115 PF02645 Uncharacterised protein, DegV family COG1307 M0D45_07125 PF00892 EamA-like transporter family M0D45_07130 PF00155 Aminotransferase class I and II M0D45_07130 PF00392 Bacterial regulatory proteins, gntR family M0D45_07150 PF00756 Putative esterase M0D45_07155 PF04828 Glutathione-dependent formaldehyde-activating enzyme M0D45_07160 PF00107 Zinc-binding dehydrogenase M0D45_07160 PF08240 Alcohol dehydrogenase GroES-like domain M0D45_07165 PF02583 Metal-sensitive transcriptional repressor M0D45_07175 PF00486 Transcriptional regulatory protein, C terminal M0D45_07175 PF00072 Response regulator receiver domain M0D45_07180 PF00512 His Kinase A (phospho-acceptor) domain M0D45_07180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_07180 PF00672 HAMP domain M0D45_07185 PF04107 Glutamate-cysteine ligase family 2(GCS2) M0D45_07190 PF01926 50S ribosome-binding GTPase M0D45_07195 PF00034 Cytochrome c M0D45_07205 PF01323 DSBA-like thioredoxin domain M0D45_07215 PF02028 BCCT, betaine/carnitine/choline family transporter M0D45_07220 PF00171 Aldehyde dehydrogenase family M0D45_07225 PF00732 GMC oxidoreductase M0D45_07225 PF05199 GMC oxidoreductase M0D45_07230 PF00544 Pectate lyase M0D45_07245 PF01066 CDP-alcohol phosphatidyltransferase M0D45_07255 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M0D45_07255 PF04073 Aminoacyl-tRNA editing domain M0D45_07255 PF03129 Anticodon binding domain M0D45_07260 PF00816 H-NS histone family M0D45_07270 PF02405 Permease MlaE M0D45_07275 PF00005 ABC transporter M0D45_07280 PF03886 ABC-type transport auxiliary lipoprotein component M0D45_07280 PF02470 MlaD protein M0D45_07300 PF14307 Glycosyltransferase WbsX M0D45_07300 PF05045 Rhamnan synthesis protein F M0D45_07305 PF01144 Coenzyme A transferase M0D45_07310 PF01144 Coenzyme A transferase M0D45_07315 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M0D45_07315 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M0D45_07315 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M0D45_07315 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M0D45_07320 PF00483 Nucleotidyl transferase M0D45_07320 PF01050 Mannose-6-phosphate isomerase M0D45_07325 PF04321 RmlD substrate binding domain M0D45_07330 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase M0D45_07335 PF00483 Nucleotidyl transferase M0D45_07340 PF16363 GDP-mannose 4,6 dehydratase M0D45_07345 PF01012 Electron transfer flavoprotein domain M0D45_07350 PF00766 Electron transfer flavoprotein FAD-binding domain M0D45_07350 PF01012 Electron transfer flavoprotein domain M0D45_07360 PF01040 UbiA prenyltransferase family M0D45_07365 PF01565 FAD binding domain M0D45_07365 PF04030 D-arabinono-1,4-lactone oxidase M0D45_07370 PF00106 short chain dehydrogenase M0D45_07380 PF01370 NAD dependent epimerase/dehydratase family M0D45_07385 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M0D45_07385 PF07992 Pyridine nucleotide-disulphide oxidoreductase M0D45_07400 PF01209 ubiE/COQ5 methyltransferase family M0D45_07410 PF14307 Glycosyltransferase WbsX M0D45_07410 PF05045 Rhamnan synthesis protein F M0D45_07415 PF00535 Glycosyl transferase family 2 M0D45_07420 PF00132 Bacterial transferase hexapeptide (six repeats) M0D45_07425 PF00005 ABC transporter M0D45_07435 PF01053 Cys/Met metabolism PLP-dependent enzyme M0D45_07440 PF00571 CBS domain M0D45_07440 PF00291 Pyridoxal-phosphate dependent enzyme M0D45_07460 PF00437 Type II/IV secretion system protein M0D45_07465 PF02798 Glutathione S-transferase, N-terminal domain M0D45_07465 PF14497 Glutathione S-transferase, C-terminal domain M0D45_07475 PF00270 DEAD/DEAH box helicase M0D45_07475 PF00271 Helicase conserved C-terminal domain M0D45_07480 PF01242 6-pyruvoyl tetrahydropterin synthase M0D45_07495 PF13185 GAF domain M0D45_07505 PF13419 Haloacid dehalogenase-like hydrolase M0D45_07510 PF00817 impB/mucB/samB family M0D45_07510 PF11799 impB/mucB/samB family C-terminal domain M0D45_07515 PF07977 FabA-like domain M0D45_07520 PF02801 Beta-ketoacyl synthase, C-terminal domain M0D45_07520 PF00109 Beta-ketoacyl synthase, N-terminal domain M0D45_07530 PF01432 Peptidase family M3 M0D45_07545 PF00394 Multicopper oxidase M0D45_07545 PF07732 Multicopper oxidase M0D45_07545 PF07731 Multicopper oxidase M0D45_07550 PF05275 Copper resistance protein B precursor (CopB) M0D45_07555 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M0D45_07580 PF01380 SIS domain M0D45_07585 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M0D45_07590 PF02687 FtsX-like permease family M0D45_07590 PF00005 ABC transporter M0D45_07590 PF12704 MacB-like periplasmic core domain M0D45_07595 PF00005 ABC transporter M0D45_07595 PF12704 MacB-like periplasmic core domain M0D45_07595 PF02687 FtsX-like permease family M0D45_07600 PF02687 FtsX-like permease family M0D45_07600 PF00005 ABC transporter M0D45_07600 PF12704 MacB-like periplasmic core domain M0D45_07605 PF02954 Bacterial regulatory protein, Fis family M0D45_07605 PF00072 Response regulator receiver domain M0D45_07605 PF00158 Sigma-54 interaction domain M0D45_07610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_07610 PF00512 His Kinase A (phospho-acceptor) domain M0D45_07610 PF00672 HAMP domain M0D45_07620 PF14602 Hexapeptide repeat of succinyl-transferase M0D45_07620 PF12804 MobA-like NTP transferase domain M0D45_07620 PF00132 Bacterial transferase hexapeptide (six repeats) M0D45_07635 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain M0D45_07640 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M0D45_07640 PF02874 ATP synthase alpha/beta family, beta-barrel domain M0D45_07645 PF00231 ATP synthase M0D45_07650 PF02874 ATP synthase alpha/beta family, beta-barrel domain M0D45_07650 PF00306 ATP synthase alpha/beta chain, C terminal domain M0D45_07650 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M0D45_07655 PF00213 ATP synthase delta (OSCP) subunit M0D45_07660 PF00430 ATP synthase B/B' CF(0) M0D45_07665 PF00137 ATP synthase subunit C M0D45_07670 PF00119 ATP synthase A chain M0D45_07690 PF07992 Pyridine nucleotide-disulphide oxidoreductase M0D45_07690 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M0D45_07700 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M0D45_07700 PF00364 Biotin-requiring enzyme M0D45_07700 PF02817 e3 binding domain M0D45_07735 PF03180 NLPA lipoprotein M0D45_07740 PF00528 Binding-protein-dependent transport system inner membrane component M0D45_07745 PF09383 NIL domain M0D45_07745 PF00005 ABC transporter M0D45_07750 PF00892 EamA-like transporter family M0D45_07755 PF04461 Protein of unknown function (DUF520) M0D45_07765 PF00672 HAMP domain M0D45_07765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_07765 PF00512 His Kinase A (phospho-acceptor) domain M0D45_07765 PF01627 Hpt domain M0D45_07765 PF00072 Response regulator receiver domain M0D45_07765 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M0D45_07785 PF13419 Haloacid dehalogenase-like hydrolase M0D45_07790 PF00849 RNA pseudouridylate synthase M0D45_07790 PF01479 S4 domain M0D45_07795 PF08468 Methyltransferase small domain N-terminal M0D45_07795 PF05175 Methyltransferase small domain M0D45_07805 PF07995 Glucose / Sorbosone dehydrogenase M0D45_07815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_07815 PF00512 His Kinase A (phospho-acceptor) domain M0D45_07815 PF00989 PAS fold M0D45_07835 PF00842 Alanine racemase, C-terminal domain M0D45_07835 PF01168 Alanine racemase, N-terminal domain M0D45_07840 PF01266 FAD dependent oxidoreductase M0D45_07845 PF01037 Lrp/AsnC ligand binding domain M0D45_07855 PF01641 SelR domain M0D45_07865 PF01618 MotA/TolQ/ExbB proton channel family M0D45_07870 PF00691 OmpA family M0D45_07870 PF13677 Membrane MotB of proton-channel complex MotA/MotB M0D45_07885 PF00072 Response regulator receiver domain M0D45_07885 PF00486 Transcriptional regulatory protein, C terminal M0D45_07890 PF08448 PAS fold M0D45_07890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_07890 PF00512 His Kinase A (phospho-acceptor) domain M0D45_07890 PF13188 PAS domain M0D45_07890 PF00072 Response regulator receiver domain M0D45_07895 PF03895 YadA-like membrane anchor domain M0D45_07895 PF05658 Head domain of trimeric autotransporter adhesin M0D45_07895 PF13018 Extended Signal Peptide of Type V secretion system M0D45_07895 PF05662 Coiled stalk of trimeric autotransporter adhesin M0D45_07900 PF00082 Subtilase family M0D45_07900 PF04151 Bacterial pre-peptidase C-terminal domain M0D45_07910 PF09286 Pro-kumamolisin, activation domain M0D45_07910 PF04151 Bacterial pre-peptidase C-terminal domain M0D45_07935 PF01061 ABC-2 type transporter M0D45_07940 PF00005 ABC transporter M0D45_07945 PF00999 Sodium/hydrogen exchanger family M0D45_07955 PF02469 Fasciclin domain M0D45_07960 PF03167 Uracil DNA glycosylase superfamily M0D45_07970 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase M0D45_07980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D45_07980 PF03466 LysR substrate binding domain M0D45_07985 PF03358 NADPH-dependent FMN reductase M0D45_07990 PF00248 Aldo/keto reductase family M0D45_08005 PF01431 Peptidase family M13 M0D45_08005 PF05649 Peptidase family M13 M0D45_08020 PF13520 Amino acid permease M0D45_08030 PF00072 Response regulator receiver domain M0D45_08030 PF04397 LytTr DNA-binding domain M0D45_08035 PF02743 Cache domain M0D45_08035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_08035 PF06580 Histidine kinase M0D45_08035 PF00672 HAMP domain M0D45_08050 PF05974 Domain of unknown function (DUF892) M0D45_08055 PF05067 Manganese containing catalase M0D45_08065 PF02954 Bacterial regulatory protein, Fis family M0D45_08065 PF00158 Sigma-54 interaction domain M0D45_08065 PF00072 Response regulator receiver domain M0D45_08070 PF01654 Cytochrome bd terminal oxidase subunit I M0D45_08075 PF02322 Cytochrome bd terminal oxidase subunit II M0D45_08100 PF08240 Alcohol dehydrogenase GroES-like domain M0D45_08100 PF13823 Alcohol dehydrogenase GroES-associated M0D45_08100 PF00107 Zinc-binding dehydrogenase M0D45_08145 PF07715 TonB-dependent Receptor Plug Domain M0D45_08145 PF00593 TonB dependent receptor M0D45_08160 PF00005 ABC transporter M0D45_08170 PF03466 LysR substrate binding domain M0D45_08170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D45_08175 PF01042 Endoribonuclease L-PSP M0D45_08205 PF01740 STAS domain M0D45_08205 PF00916 Sulfate permease family M0D45_08210 PF00654 Voltage gated chloride channel M0D45_08220 PF00557 Metallopeptidase family M24 M0D45_08235 PF02630 SCO1/SenC M0D45_08320 PF03979 Sigma-70 factor, region 1.1 M0D45_08320 PF00140 Sigma-70 factor, region 1.2 M0D45_08320 PF04542 Sigma-70 region 2 M0D45_08320 PF04539 Sigma-70 region 3 M0D45_08320 PF04545 Sigma-70, region 4 M0D45_08320 PF04546 Sigma-70, non-essential region M0D45_08325 PF02580 D-Tyr-tRNA(Tyr) deacylase M0D45_08330 PF03279 Bacterial lipid A biosynthesis acyltransferase M0D45_08340 PF00925 GTP cyclohydrolase II M0D45_08360 PF00535 Glycosyl transferase family 2 M0D45_08375 PF01189 16S rRNA methyltransferase RsmB/F M0D45_08375 PF01029 NusB family M0D45_08380 PF02911 Formyl transferase, C-terminal domain M0D45_08380 PF00551 Formyl transferase M0D45_08385 PF01327 Polypeptide deformylase M0D45_08390 PF01476 LysM domain M0D45_08395 PF17782 DprA winged helix domain M0D45_08395 PF02481 DNA recombination-mediator protein A M0D45_08400 PF04361 Protein of unknown function (DUF494) M0D45_08405 PF07963 Prokaryotic N-terminal methylation motif M0D45_08405 PF00114 Pilin (bacterial filament) M0D45_08415 PF01751 Toprim domain M0D45_08415 PF13368 Topoisomerase C-terminal repeat M0D45_08415 PF01131 DNA topoisomerase M0D45_08420 PF01300 Telomere recombination M0D45_08445 PF01343 Peptidase family S49 M0D45_08450 PF01554 MatE M0D45_08470 PF18319 PriA DNA helicase Cys-rich region (CRR) domain M0D45_08470 PF18074 Primosomal protein N C-terminal domain M0D45_08470 PF17764 3′ DNA-binding domain (3′BD) M0D45_08470 PF00271 Helicase conserved C-terminal domain M0D45_08470 PF00270 DEAD/DEAH box helicase M0D45_08475 PF00043 Glutathione S-transferase, C-terminal domain M0D45_08475 PF13417 Glutathione S-transferase, N-terminal domain M0D45_08490 PF07992 Pyridine nucleotide-disulphide oxidoreductase M0D45_08495 PF03458 UPF0126 domain M0D45_08500 PF04545 Sigma-70, region 4 M0D45_08500 PF04542 Sigma-70 region 2 M0D45_08505 PF03167 Uracil DNA glycosylase superfamily M0D45_08510 PF01339 CheB methylesterase M0D45_08510 PF00072 Response regulator receiver domain M0D45_08515 PF18075 FtsX extracellular domain M0D45_08520 PF00005 ABC transporter M0D45_08525 PF00271 Helicase conserved C-terminal domain M0D45_08525 PF12300 ATP-dependent RNA helicase RhlB M0D45_08525 PF00270 DEAD/DEAH box helicase M0D45_08530 PF00085 Thioredoxin M0D45_08535 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M0D45_08535 PF07498 Rho termination factor, N-terminal domain M0D45_08535 PF07497 Rho termination factor, RNA-binding domain M0D45_08545 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) M0D45_08550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D45_08550 PF03466 LysR substrate binding domain M0D45_08560 PF03971 Monomeric isocitrate dehydrogenase M0D45_08570 PF01476 LysM domain M0D45_08570 PF04972 BON domain M0D45_08575 PF14489 QueF-like protein M0D45_08575 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term M0D45_08580 PF07687 Peptidase dimerisation domain M0D45_08580 PF01546 Peptidase family M20/M25/M40 M0D45_08585 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M0D45_08590 PF00873 AcrB/AcrD/AcrF family M0D45_08595 PF00873 AcrB/AcrD/AcrF family M0D45_08615 PF07063 Domain of unknown function (DUF1338) M0D45_08650 PF01427 D-ala-D-ala dipeptidase M0D45_08655 PF01510 N-acetylmuramoyl-L-alanine amidase M0D45_08665 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M0D45_08665 PF13378 Enolase C-terminal domain-like M0D45_08675 PF13520 Amino acid permease M0D45_08690 PF05360 yiaA/B two helix domain M0D45_08695 PF07995 Glucose / Sorbosone dehydrogenase M0D45_08700 PF01915 Glycosyl hydrolase family 3 C-terminal domain M0D45_08700 PF14310 Fibronectin type III-like domain M0D45_08700 PF00933 Glycosyl hydrolase family 3 N terminal domain M0D45_08705 PF02152 Dihydroneopterin aldolase M0D45_08710 PF00814 Glycoprotease family M0D45_08715 PF01165 Ribosomal protein S21 M0D45_08720 PF09424 Yqey-like protein M0D45_08730 PF03631 Virulence factor BrkB M0D45_08735 PF10410 DnaB-helicase binding domain of primase M0D45_08735 PF08278 DNA primase DnaG DnaB-binding M0D45_08735 PF08275 DNA primase catalytic core, N-terminal domain M0D45_08735 PF01807 CHC2 zinc finger M0D45_08745 PF13593 SBF-like CPA transporter family (DUF4137) M0D45_08755 PF01040 UbiA prenyltransferase family M0D45_08780 PF00510 Cytochrome c oxidase subunit III M0D45_08785 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 M0D45_08795 PF00115 Cytochrome C and Quinol oxidase polypeptide I M0D45_08800 PF02790 Cytochrome C oxidase subunit II, transmembrane domain M0D45_08800 PF00116 Cytochrome C oxidase subunit II, periplasmic domain M0D45_08810 PF00171 Aldehyde dehydrogenase family M0D45_08810 PF01619 Proline dehydrogenase M0D45_08810 PF14850 DNA-binding domain of Proline dehydrogenase M0D45_08810 PF18327 Proline utilization A proline dehydrogenase N-terminal domain M0D45_08840 PF00579 tRNA synthetases class I (W and Y) M0D45_08845 PF04225 Opacity-associated protein A LysM-like domain M0D45_08845 PF01551 Peptidase family M23 M0D45_08850 PF03702 Anhydro-N-acetylmuramic acid kinase M0D45_08860 PF07690 Major Facilitator Superfamily M0D45_08865 PF03372 Endonuclease/Exonuclease/phosphatase family M0D45_08870 PF00156 Phosphoribosyl transferase domain M0D45_08880 PF13614 AAA domain M0D45_08885 PF02195 ParB-like nuclease domain M0D45_08885 PF17762 HTH domain found in ParB protein M0D45_08895 PF01370 NAD dependent epimerase/dehydratase family M0D45_08900 PF00535 Glycosyl transferase family 2 M0D45_08915 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M0D45_08915 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M0D45_08915 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M0D45_08915 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M0D45_08920 PF00692 dUTPase M0D45_08925 PF04127 DNA / pantothenate metabolism flavoprotein M0D45_08925 PF02441 Flavoprotein M0D45_08930 PF04002 RadC-like JAB domain M0D45_08935 PF03485 Arginyl tRNA synthetase N terminal domain M0D45_08935 PF05746 DALR anticodon binding domain M0D45_08935 PF00750 tRNA synthetases class I (R) M0D45_08950 PF00106 short chain dehydrogenase M0D45_08955 PF01757 Acyltransferase family M0D45_08960 PF03033 Glycosyltransferase family 28 N-terminal domain M0D45_08965 PF00550 Phosphopantetheine attachment site M0D45_08965 PF00975 Thioesterase domain M0D45_08965 PF00501 AMP-binding enzyme M0D45_08965 PF00668 Condensation domain M0D45_08965 PF13193 AMP-binding enzyme C-terminal domain M0D45_08970 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain M0D45_08970 PF17944 Arginine decarboxylase C-terminal helical extension M0D45_08970 PF17810 Arginine decarboxylase helical bundle domain M0D45_08975 PF17284 Spermidine synthase tetramerisation domain M0D45_08995 PF00754 F5/8 type C domain M0D45_08995 PF00041 Fibronectin type III domain M0D45_08995 PF07555 beta-N-acetylglucosaminidase M0D45_08995 PF00963 Cohesin domain M0D45_08995 PF02838 Glycosyl hydrolase family 20, domain 2 M0D45_09000 PF00543 Nitrogen regulatory protein P-II M0D45_09005 PF04380 Membrane fusogenic activity M0D45_09010 PF01078 Magnesium chelatase, subunit ChlI M0D45_09010 PF13335 Magnesium chelatase, subunit ChlI C-terminal M0D45_09025 PF12792 CSS motif domain associated with EAL M0D45_09025 PF00563 EAL domain M0D45_09030 PF00487 Fatty acid desaturase M0D45_09035 PF00970 Oxidoreductase FAD-binding domain M0D45_09035 PF00175 Oxidoreductase NAD-binding domain M0D45_09035 PF00111 2Fe-2S iron-sulfur cluster binding domain M0D45_09040 PF00440 Bacterial regulatory proteins, tetR family M0D45_09055 PF01139 tRNA-splicing ligase RtcB M0D45_09095 PF01370 NAD dependent epimerase/dehydratase family M0D45_09095 PF08338 Domain of unknown function (DUF1731) M0D45_09105 PF00595 PDZ domain M0D45_09125 PF01594 AI-2E family transporter M0D45_09130 PF13419 Haloacid dehalogenase-like hydrolase M0D45_09135 PF00883 Cytosol aminopeptidase family, catalytic domain M0D45_09135 PF02789 Cytosol aminopeptidase family, N-terminal domain M0D45_09140 PF00199 Catalase M0D45_09155 PF00072 Response regulator receiver domain M0D45_09155 PF00196 Bacterial regulatory proteins, luxR family M0D45_09160 PF07730 Histidine kinase M0D45_09165 PF13533 Biotin-lipoyl like M0D45_09170 PF00005 ABC transporter M0D45_09190 PF00892 EamA-like transporter family M0D45_09195 PF00892 EamA-like transporter family M0D45_09220 PF00579 tRNA synthetases class I (W and Y) M0D45_09225 PF05532 CsbD-like M0D45_09240 PF00491 Arginase family M0D45_09265 PF02223 Thymidylate kinase M0D45_09280 PF03309 Type III pantothenate kinase M0D45_09285 PF02237 Biotin protein ligase C terminal domain M0D45_09285 PF08279 HTH domain M0D45_09285 PF03099 Biotin/lipoate A/B protein ligase family M0D45_09295 PF06167 Glucose-regulated metallo-peptidase M90 M0D45_09310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_09315 PF00072 Response regulator receiver domain M0D45_09315 PF00486 Transcriptional regulatory protein, C terminal M0D45_09325 PF01207 Dihydrouridine synthase (Dus) M0D45_09355 PF00199 Catalase M0D45_09355 PF06628 Catalase-related immune-responsive M0D45_09360 PF13307 Helicase C-terminal domain M0D45_09360 PF06733 DEAD_2 M0D45_09375 PF18317 Shikimate 5'-dehydrogenase C-terminal domain M0D45_09375 PF01488 Shikimate / quinate 5-dehydrogenase M0D45_09375 PF08501 Shikimate dehydrogenase substrate binding domain M0D45_09395 PF00667 FAD binding domain M0D45_09395 PF00175 Oxidoreductase NAD-binding domain M0D45_09395 PF00258 Flavodoxin M0D45_09415 PF00490 Delta-aminolevulinic acid dehydratase M0D45_09445 PF00326 Prolyl oligopeptidase family M0D45_09445 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region M0D45_09450 PF02798 Glutathione S-transferase, N-terminal domain M0D45_09450 PF00043 Glutathione S-transferase, C-terminal domain M0D45_09470 PF04820 Tryptophan halogenase M0D45_09485 PF00005 ABC transporter M0D45_09495 PF01381 Helix-turn-helix M0D45_09505 PF02583 Metal-sensitive transcriptional repressor M0D45_09510 PF01545 Cation efflux family M0D45_09515 PF01383 CpcD/allophycocyanin linker domain M0D45_09515 PF00175 Oxidoreductase NAD-binding domain M0D45_09520 PF00005 ABC transporter M0D45_09525 PF01061 ABC-2 type transporter M0D45_09530 PF02558 Ketopantoate reductase PanE/ApbA M0D45_09530 PF08546 Ketopantoate reductase PanE/ApbA C terminal M0D45_09545 PF03061 Thioesterase superfamily M0D45_09560 PF00268 Ribonucleotide reductase, small chain M0D45_09565 PF03477 ATP cone domain M0D45_09565 PF00317 Ribonucleotide reductase, all-alpha domain M0D45_09565 PF02867 Ribonucleotide reductase, barrel domain M0D45_09575 PF13380 CoA binding domain M0D45_09575 PF13607 Succinyl-CoA ligase like flavodoxin domain M0D45_09575 PF00583 Acetyltransferase (GNAT) family M0D45_09585 PF00571 CBS domain M0D45_09585 PF01769 Divalent cation transporter M0D45_09585 PF03448 MgtE intracellular N domain M0D45_09590 PF02254 TrkA-N domain M0D45_09590 PF00999 Sodium/hydrogen exchanger family M0D45_09605 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain M0D45_09605 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain M0D45_09610 PF00723 Glycosyl hydrolases family 15 M0D45_09625 PF05166 YcgL domain M0D45_09630 PF00109 Beta-ketoacyl synthase, N-terminal domain M0D45_09630 PF02801 Beta-ketoacyl synthase, C-terminal domain M0D45_09640 PF00535 Glycosyl transferase family 2 M0D45_09690 PF01553 Acyltransferase M0D45_09700 PF00550 Phosphopantetheine attachment site M0D45_09705 PF01494 FAD binding domain M0D45_09720 PF00326 Prolyl oligopeptidase family M0D45_09720 PF07676 WD40-like Beta Propeller Repeat M0D45_09735 PF01218 Coproporphyrinogen III oxidase M0D45_09745 PF01367 5'-3' exonuclease, C-terminal SAM fold M0D45_09745 PF00476 DNA polymerase family A M0D45_09745 PF01612 3'-5' exonuclease M0D45_09745 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M0D45_09755 PF00069 Protein kinase domain M0D45_09755 PF03793 PASTA domain M0D45_09765 PF08281 Sigma-70, region 4 M0D45_09765 PF04542 Sigma-70 region 2 M0D45_09780 PF00328 Histidine phosphatase superfamily (branch 2) M0D45_09825 PF12464 Maltose acetyltransferase M0D45_09825 PF14602 Hexapeptide repeat of succinyl-transferase M0D45_09835 PF13361 UvrD-like helicase C-terminal domain M0D45_09835 PF00580 UvrD/REP helicase N-terminal domain M0D45_09850 PF13396 Phospholipase_D-nuclease N-terminal M0D45_09850 PF13091 PLD-like domain M0D45_09855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D45_09855 PF03466 LysR substrate binding domain M0D45_09860 PF03737 Aldolase/RraA M0D45_09865 PF04303 PrpF protein M0D45_09870 PF04909 Amidohydrolase M0D45_09875 PF00471 Ribosomal protein L33 M0D45_09880 PF00830 Ribosomal L28 family M0D45_09885 PF00873 AcrB/AcrD/AcrF family M0D45_09895 PF13533 Biotin-lipoyl like M0D45_09915 PF02527 rRNA small subunit methyltransferase G M0D45_09920 PF09423 PhoD-like phosphatase M0D45_09920 PF16655 PhoD-like phosphatase, N-terminal domain M0D45_09925 PF09423 PhoD-like phosphatase M0D45_09925 PF16655 PhoD-like phosphatase, N-terminal domain M0D45_09930 PF01648 4'-phosphopantetheinyl transferase superfamily M0D45_09935 PF04226 Transglycosylase associated protein M0D45_09950 PF00480 ROK family M0D45_09955 PF00474 Sodium:solute symporter family M0D45_09960 PF04341 Protein of unknown function, DUF485 M0D45_09970 PF16177 Acetyl-coenzyme A synthetase N-terminus M0D45_09970 PF00501 AMP-binding enzyme M0D45_09970 PF13193 AMP-binding enzyme C-terminal domain M0D45_09975 PF00196 Bacterial regulatory proteins, luxR family M0D45_09975 PF00072 Response regulator receiver domain M0D45_10000 PF00248 Aldo/keto reductase family M0D45_10015 PF01557 Fumarylacetoacetate (FAA) hydrolase family M0D45_10020 PF13378 Enolase C-terminal domain-like M0D45_10020 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M0D45_10025 PF05336 L-rhamnose mutarotase M0D45_10030 PF07690 Major Facilitator Superfamily M0D45_10035 PF09339 IclR helix-turn-helix domain M0D45_10035 PF01614 Bacterial transcriptional regulator M0D45_10050 PF02659 Putative manganese efflux pump M0D45_10055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_10055 PF00512 His Kinase A (phospho-acceptor) domain M0D45_10065 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain M0D45_10065 PF06165 Glycosyltransferase family 36 M0D45_10080 PF13570 PQQ-like domain M0D45_10080 PF01011 PQQ enzyme repeat M0D45_10080 PF13360 PQQ-like domain M0D45_10100 PF04357 TamB, inner membrane protein subunit of TAM complex M0D45_10105 PF17243 POTRA domain TamA domain 1 M0D45_10105 PF01103 Surface antigen M0D45_10110 PF00593 TonB dependent receptor M0D45_10110 PF07715 TonB-dependent Receptor Plug Domain M0D45_10115 PF13181 Tetratricopeptide repeat M0D45_10120 PF05746 DALR anticodon binding domain M0D45_10120 PF02092 Glycyl-tRNA synthetase beta subunit M0D45_10125 PF02091 Glycyl-tRNA synthetase alpha subunit M0D45_10130 PF00437 Type II/IV secretion system protein M0D45_10130 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M0D45_10140 PF00958 GMP synthase C terminal domain M0D45_10140 PF00117 Glutamine amidotransferase class-I M0D45_10150 PF00902 Sec-independent protein translocase protein (TatC) M0D45_10155 PF02416 mttA/Hcf106 family M0D45_10160 PF02416 mttA/Hcf106 family M0D45_10170 PF00762 Ferrochelatase M0D45_10175 PF12697 Alpha/beta hydrolase family M0D45_10185 PF04381 Putative exonuclease, RdgC M0D45_10190 PF01171 PP-loop family M0D45_10200 PF00356 Bacterial regulatory proteins, lacI family M0D45_10210 PF07477 Glycosyl hydrolase family 67 C-terminus M0D45_10210 PF03648 Glycosyl hydrolase family 67 N-terminus M0D45_10210 PF07488 Glycosyl hydrolase family 67 middle domain M0D45_10220 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M0D45_10220 PF13378 Enolase C-terminal domain-like M0D45_10225 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain M0D45_10225 PF04616 Glycosyl hydrolases family 43 M0D45_10230 PF07691 PA14 domain M0D45_10230 PF01915 Glycosyl hydrolase family 3 C-terminal domain M0D45_10230 PF00933 Glycosyl hydrolase family 3 N terminal domain M0D45_10230 PF14310 Fibronectin type III-like domain M0D45_10235 PF01232 Mannitol dehydrogenase Rossmann domain M0D45_10235 PF08125 Mannitol dehydrogenase C-terminal domain M0D45_10260 PF08450 SMP-30/Gluconolactonase/LRE-like region M0D45_10265 PF00331 Glycosyl hydrolase family 10 M0D45_10300 PF02614 Glucuronate isomerase M0D45_10320 PF00553 Cellulose binding domain M0D45_10320 PF00331 Glycosyl hydrolase family 10 M0D45_10320 PF03422 Carbohydrate binding module (family 6) M0D45_10340 PF04616 Glycosyl hydrolases family 43 M0D45_10350 PF01906 Putative heavy-metal-binding M0D45_10375 PF08240 Alcohol dehydrogenase GroES-like domain M0D45_10375 PF00698 Acyl transferase domain M0D45_10375 PF16197 Ketoacyl-synthetase C-terminal extension M0D45_10375 PF00107 Zinc-binding dehydrogenase M0D45_10375 PF00109 Beta-ketoacyl synthase, N-terminal domain M0D45_10375 PF02801 Beta-ketoacyl synthase, C-terminal domain M0D45_10375 PF08659 KR domain M0D45_10375 PF00550 Phosphopantetheine attachment site M0D45_10375 PF14765 Polyketide synthase dehydratase M0D45_10380 PF01553 Acyltransferase M0D45_10390 PF00356 Bacterial regulatory proteins, lacI family M0D45_10405 PF04820 Tryptophan halogenase M0D45_10410 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family M0D45_10415 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) M0D45_10420 PF04337 Protein of unknown function, DUF480 M0D45_10435 PF00580 UvrD/REP helicase N-terminal domain M0D45_10435 PF13361 UvrD-like helicase C-terminal domain M0D45_10440 PF00265 Thymidine kinase M0D45_10445 PF01590 GAF domain M0D45_10445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_10445 PF00512 His Kinase A (phospho-acceptor) domain M0D45_10445 PF08446 PAS fold M0D45_10445 PF00360 Phytochrome region M0D45_10450 PF04349 Periplasmic glucan biosynthesis protein, MdoG M0D45_10460 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain M0D45_10460 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain M0D45_10460 PF06827 Zinc finger found in FPG and IleRS M0D45_10490 PF03594 Benzoate membrane transport protein M0D45_10495 PF13426 PAS domain M0D45_10495 PF00360 Phytochrome region M0D45_10495 PF01590 GAF domain M0D45_10495 PF08446 PAS fold M0D45_10500 PF01126 Heme oxygenase M0D45_10505 PF07690 Major Facilitator Superfamily M0D45_10510 PF01263 Aldose 1-epimerase M0D45_10520 PF02810 SEC-C motif M0D45_10525 PF01925 Sulfite exporter TauE/SafE M0D45_10545 PF01227 GTP cyclohydrolase I M0D45_10560 PF13533 Biotin-lipoyl like M0D45_10565 PF02321 Outer membrane efflux protein M0D45_10570 PF04632 Fusaric acid resistance protein family M0D45_10575 PF00083 Sugar (and other) transporter M0D45_10600 PF13091 PLD-like domain M0D45_10600 PF13396 Phospholipase_D-nuclease N-terminal M0D45_10645 PF00849 RNA pseudouridylate synthase M0D45_10680 PF13538 UvrD-like helicase C-terminal domain M0D45_10685 PF12705 PD-(D/E)XK nuclease superfamily M0D45_10685 PF00580 UvrD/REP helicase N-terminal domain M0D45_10685 PF13361 UvrD-like helicase C-terminal domain M0D45_10690 PF17946 RecC C-terminal domain M0D45_10695 PF00005 ABC transporter M0D45_10700 PF02405 Permease MlaE M0D45_10710 PF05494 MlaC protein M0D45_10720 PF04333 MlaA lipoprotein M0D45_10730 PF00255 Glutathione peroxidase M0D45_10740 PF02646 RmuC family M0D45_10745 PF08240 Alcohol dehydrogenase GroES-like domain M0D45_10745 PF00107 Zinc-binding dehydrogenase M0D45_10750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D45_10750 PF03466 LysR substrate binding domain M0D45_10770 PF13520 Amino acid permease M0D45_10775 PF07971 Glycosyl hydrolase family 92 M0D45_10775 PF17678 Glycosyl hydrolase family 92 N-terminal domain M0D45_10790 PF10947 Protein of unknown function (DUF2628) M0D45_10795 PF00990 Diguanylate cyclase, GGDEF domain M0D45_10795 PF08448 PAS fold M0D45_10805 PF02595 Glycerate kinase family M0D45_10810 PF07690 Major Facilitator Superfamily M0D45_10825 PF10672 S-adenosylmethionine-dependent methyltransferase M0D45_10825 PF17785 PUA-like domain M0D45_10830 PF03741 Integral membrane protein TerC family M0D45_10835 PF01694 Rhomboid family M0D45_10840 PF03009 Glycerophosphoryl diester phosphodiesterase family M0D45_10850 PF01569 PAP2 superfamily M0D45_10855 PF12631 MnmE helical domain M0D45_10855 PF10396 GTP-binding protein TrmE N-terminus M0D45_10855 PF01926 50S ribosome-binding GTPase M0D45_10860 PF01522 Polysaccharide deacetylase M0D45_10865 PF02096 60Kd inner membrane protein M0D45_10865 PF14849 YidC periplasmic domain M0D45_10870 PF00825 Ribonuclease P M0D45_10875 PF00468 Ribosomal protein L34 M0D45_10880 PF00308 Bacterial dnaA protein M0D45_10880 PF08299 Bacterial dnaA protein helix-turn-helix M0D45_10880 PF11638 DnaA N-terminal domain M0D45_10885 PF00712 DNA polymerase III beta subunit, N-terminal domain M0D45_10885 PF02767 DNA polymerase III beta subunit, central domain M0D45_10885 PF02768 DNA polymerase III beta subunit, C-terminal domain M0D45_10890 PF02463 RecF/RecN/SMC N terminal domain M0D45_10895 PF01751 Toprim domain M0D45_10895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_10895 PF00204 DNA gyrase B M0D45_10895 PF18053 DNA gyrase B subunit insert domain M0D45_10895 PF00986 DNA gyrase B subunit, carboxyl terminus M0D45_10905 PF01435 Peptidase family M48 M0D45_10915 PF03544 Gram-negative bacterial TonB protein C-terminal M0D45_10920 PF01618 MotA/TolQ/ExbB proton channel family M0D45_10925 PF02472 Biopolymer transport protein ExbD/TolR M0D45_10930 PF02472 Biopolymer transport protein ExbD/TolR M0D45_10940 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ M0D45_10950 PF13091 PLD-like domain M0D45_10950 PF13396 Phospholipase_D-nuclease N-terminal M0D45_10965 PF04055 Radical SAM superfamily M0D45_10975 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) M0D45_10990 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M0D45_10990 PF01842 ACT domain M0D45_10990 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M0D45_10995 PF13180 PDZ domain M0D45_10995 PF03572 Peptidase family S41 M0D45_11000 PF01551 Peptidase family M23 M0D45_11010 PF04389 Peptidase family M28 M0D45_11020 PF00150 Cellulase (glycosyl hydrolase family 5) M0D45_11025 PF00150 Cellulase (glycosyl hydrolase family 5) M0D45_11030 PF00150 Cellulase (glycosyl hydrolase family 5) M0D45_11035 PF00107 Zinc-binding dehydrogenase M0D45_11035 PF08240 Alcohol dehydrogenase GroES-like domain M0D45_11045 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster M0D45_11045 PF07992 Pyridine nucleotide-disulphide oxidoreductase M0D45_11050 PF00310 Glutamine amidotransferases class-II M0D45_11050 PF04898 Glutamate synthase central domain M0D45_11050 PF01645 Conserved region in glutamate synthase M0D45_11050 PF01493 GXGXG motif M0D45_11100 PF02397 Bacterial sugar transferase M0D45_11105 PF02350 UDP-N-acetylglucosamine 2-epimerase M0D45_11120 PF03808 Glycosyl transferase WecB/TagA/CpsF family M0D45_11125 PF00534 Glycosyl transferases group 1 M0D45_11125 PF13439 Glycosyltransferase Family 4 M0D45_11145 PF13537 Glutamine amidotransferase domain M0D45_11145 PF00733 Asparagine synthase M0D45_11160 PF16363 GDP-mannose 4,6 dehydratase M0D45_11175 PF00005 ABC transporter M0D45_11175 PF00664 ABC transporter transmembrane region M0D45_11185 PF00733 Asparagine synthase M0D45_11185 PF13537 Glutamine amidotransferase domain M0D45_11210 PF00685 Sulfotransferase domain M0D45_11285 PF00270 DEAD/DEAH box helicase M0D45_11285 PF09369 Domain of unknown function (DUF1998) M0D45_11285 PF00271 Helicase conserved C-terminal domain M0D45_11290 PF03006 Haemolysin-III related M0D45_11300 PF00043 Glutathione S-transferase, C-terminal domain M0D45_11300 PF02798 Glutathione S-transferase, N-terminal domain M0D45_11310 PF05532 CsbD-like M0D45_11315 PF00196 Bacterial regulatory proteins, luxR family M0D45_11315 PF00072 Response regulator receiver domain M0D45_11325 PF08448 PAS fold M0D45_11325 PF13188 PAS domain M0D45_11325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_11325 PF00072 Response regulator receiver domain M0D45_11325 PF00512 His Kinase A (phospho-acceptor) domain M0D45_11345 PF16485 Protealysin propeptide M0D45_11345 PF02868 Thermolysin metallopeptidase, alpha-helical domain M0D45_11345 PF01447 Thermolysin metallopeptidase, catalytic domain M0D45_11355 PF00293 NUDIX domain M0D45_11355 PF13344 Haloacid dehalogenase-like hydrolase M0D45_11370 PF00085 Thioredoxin M0D45_11375 PF08946 Osmosensory transporter coiled coil M0D45_11375 PF00083 Sugar (and other) transporter M0D45_11415 PF07726 ATPase family associated with various cellular activities (AAA) M0D45_11415 PF17863 AAA lid domain M0D45_11465 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain M0D45_11470 PF00155 Aminotransferase class I and II M0D45_11475 PF00593 TonB dependent receptor M0D45_11475 PF07715 TonB-dependent Receptor Plug Domain M0D45_11480 PF00171 Aldehyde dehydrogenase family M0D45_11500 PF02735 Ku70/Ku80 beta-barrel domain M0D45_11505 PF01070 FMN-dependent dehydrogenase M0D45_11510 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family M0D45_11515 PF07730 Histidine kinase M0D45_11520 PF00196 Bacterial regulatory proteins, luxR family M0D45_11520 PF00072 Response regulator receiver domain M0D45_11540 PF00486 Transcriptional regulatory protein, C terminal M0D45_11540 PF18500 CadC C-terminal domain 1 M0D45_11545 PF12241 Trans-2-enoyl-CoA reductase catalytic region M0D45_11545 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase M0D45_11545 PF07055 Enoyl reductase FAD binding domain M0D45_11665 PF13018 Extended Signal Peptide of Type V secretion system M0D45_11665 PF13332 Hemagglutinin repeat M0D45_11665 PF05860 haemagglutination activity domain M0D45_11665 PF04829 Pre-toxin domain with VENN motif M0D45_11670 PF17287 POTRA domain M0D45_11670 PF08479 POTRA domain, ShlB-type M0D45_11670 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB M0D45_11675 PF00128 Alpha amylase, catalytic domain M0D45_11675 PF11896 Domain of unknown function (DUF3416) M0D45_11680 PF16657 Maltogenic Amylase, C-terminal domain M0D45_11680 PF00128 Alpha amylase, catalytic domain M0D45_11685 PF02806 Alpha amylase, C-terminal all-beta domain M0D45_11685 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) M0D45_11685 PF00128 Alpha amylase, catalytic domain M0D45_11705 PF00135 Carboxylesterase family M0D45_11710 PF13472 GDSL-like Lipase/Acylhydrolase family M0D45_11710 PF07859 alpha/beta hydrolase fold M0D45_11720 PF03480 Bacterial extracellular solute-binding protein, family 7 M0D45_11730 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M0D45_11735 PF04616 Glycosyl hydrolases family 43 M0D45_11735 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain M0D45_11740 PF00356 Bacterial regulatory proteins, lacI family M0D45_11745 PF04962 KduI/IolB family M0D45_11760 PF00657 GDSL-like Lipase/Acylhydrolase M0D45_11770 PF00351 Biopterin-dependent aromatic amino acid hydroxylase M0D45_11775 PF01037 Lrp/AsnC ligand binding domain M0D45_11780 PF07715 TonB-dependent Receptor Plug Domain M0D45_11780 PF07660 Secretin and TonB N terminus short domain M0D45_11780 PF00593 TonB dependent receptor M0D45_11785 PF01734 Patatin-like phospholipase M0D45_11790 PF07687 Peptidase dimerisation domain M0D45_11790 PF01546 Peptidase family M20/M25/M40 M0D45_11800 PF00005 ABC transporter M0D45_11815 PF00005 ABC transporter M0D45_11815 PF00571 CBS domain M0D45_11820 PF00528 Binding-protein-dependent transport system inner membrane component M0D45_11835 PF10017 Histidine-specific methyltransferase, SAM-dependent M0D45_11840 PF07804 HipA-like C-terminal domain M0D45_11840 PF13657 HipA N-terminal domain M0D45_11845 PF01381 Helix-turn-helix M0D45_11865 PF01883 Iron-sulfur cluster assembly protein M0D45_11865 PF10609 NUBPL iron-transfer P-loop NTPase M0D45_11880 PF13091 PLD-like domain M0D45_11885 PF03061 Thioesterase superfamily M0D45_11915 PF08240 Alcohol dehydrogenase GroES-like domain M0D45_11915 PF14765 Polyketide synthase dehydratase M0D45_11915 PF00550 Phosphopantetheine attachment site M0D45_11915 PF00698 Acyl transferase domain M0D45_11915 PF08659 KR domain M0D45_11925 PF02673 Bacitracin resistance protein BacA M0D45_11930 PF03951 Glutamine synthetase, beta-Grasp domain M0D45_11930 PF00120 Glutamine synthetase, catalytic domain M0D45_11935 PF00543 Nitrogen regulatory protein P-II M0D45_11940 PF00909 Ammonium Transporter Family M0D45_11945 PF00989 PAS fold M0D45_11945 PF00512 His Kinase A (phospho-acceptor) domain M0D45_11945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_11950 PF00158 Sigma-54 interaction domain M0D45_11950 PF00072 Response regulator receiver domain M0D45_11950 PF02954 Bacterial regulatory protein, Fis family M0D45_11955 PF00080 Copper/zinc superoxide dismutase (SODC) M0D45_11960 PF00080 Copper/zinc superoxide dismutase (SODC) M0D45_11965 PF03544 Gram-negative bacterial TonB protein C-terminal M0D45_11975 PF00108 Thiolase, N-terminal domain M0D45_11975 PF02803 Thiolase, C-terminal domain M0D45_12015 PF00581 Rhodanese-like domain M0D45_12020 PF02556 Preprotein translocase subunit SecB M0D45_12025 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus M0D45_12025 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus M0D45_12035 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M0D45_12035 PF00205 Thiamine pyrophosphate enzyme, central domain M0D45_12035 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M0D45_12040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_12045 PF02954 Bacterial regulatory protein, Fis family M0D45_12045 PF00072 Response regulator receiver domain M0D45_12045 PF00158 Sigma-54 interaction domain M0D45_12060 PF07690 Major Facilitator Superfamily M0D45_12065 PF00588 SpoU rRNA Methylase family M0D45_12080 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M0D45_12080 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M0D45_12085 PF02661 Fic/DOC family M0D45_12085 PF13784 Fic/DOC family N-terminal M0D45_12090 PF00561 alpha/beta hydrolase fold M0D45_12095 PF03692 Putative zinc- or iron-chelating domain M0D45_12100 PF00501 AMP-binding enzyme M0D45_12105 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family M0D45_12115 PF01820 D-ala D-ala ligase N-terminus M0D45_12115 PF07478 D-ala D-ala ligase C-terminus M0D45_12125 PF03109 ABC1 family M0D45_12140 PF00849 RNA pseudouridylate synthase M0D45_12150 PF00472 RF-1 domain M0D45_12160 PF01112 Asparaginase M0D45_12165 PF01432 Peptidase family M3 M0D45_12170 PF10502 Signal peptidase, peptidase S26 M0D45_12180 PF12706 Beta-lactamase superfamily domain M0D45_12195 PF12833 Helix-turn-helix domain M0D45_12200 PF00999 Sodium/hydrogen exchanger family M0D45_12205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D45_12205 PF03466 LysR substrate binding domain M0D45_12210 PF01274 Malate synthase M0D45_12215 PF00463 Isocitrate lyase family M0D45_12220 PF00990 Diguanylate cyclase, GGDEF domain M0D45_12240 PF00326 Prolyl oligopeptidase family M0D45_12245 PF02785 Biotin carboxylase C-terminal domain M0D45_12245 PF00289 Biotin carboxylase, N-terminal domain M0D45_12245 PF00364 Biotin-requiring enzyme M0D45_12245 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M0D45_12245 PF18140 Propionyl-coenzyme A carboxylase BT domain M0D45_12250 PF01039 Carboxyl transferase domain M0D45_12255 PF02770 Acyl-CoA dehydrogenase, middle domain M0D45_12255 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M0D45_12255 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M0D45_12310 PF07683 Cobalamin synthesis protein cobW C-terminal domain M0D45_12310 PF02492 CobW/HypB/UreG, nucleotide-binding domain M0D45_12330 PF03969 AFG1-like ATPase M0D45_12335 PF01047 MarR family M0D45_12340 PF02566 OsmC-like protein M0D45_12360 PF00248 Aldo/keto reductase family M0D45_12365 PF16884 N-terminal domain of oxidoreductase M0D45_12365 PF00107 Zinc-binding dehydrogenase M0D45_12370 PF00248 Aldo/keto reductase family M0D45_12380 PF00849 RNA pseudouridylate synthase M0D45_12390 PF00270 DEAD/DEAH box helicase M0D45_12390 PF04408 Helicase associated domain (HA2) M0D45_12390 PF08482 ATP-dependent helicase C-terminal M0D45_12390 PF00271 Helicase conserved C-terminal domain M0D45_12395 PF07308 Protein of unknown function (DUF1456) M0D45_12400 PF00576 HIUase/Transthyretin family M0D45_12405 PF13454 FAD-NAD(P)-binding M0D45_12410 PF09349 OHCU decarboxylase M0D45_12410 PF01014 Uricase M0D45_12425 PF00266 Aminotransferase class-V M0D45_12430 PF07687 Peptidase dimerisation domain M0D45_12430 PF01546 Peptidase family M20/M25/M40 M0D45_12435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D45_12435 PF03466 LysR substrate binding domain M0D45_12440 PF00561 alpha/beta hydrolase fold M0D45_12500 PF01425 Amidase M0D45_12510 PF01156 Inosine-uridine preferring nucleoside hydrolase M0D45_12520 PF00860 Permease family M0D45_12525 PF00111 2Fe-2S iron-sulfur cluster binding domain M0D45_12530 PF00355 Rieske [2Fe-2S] domain M0D45_12535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D45_12535 PF03466 LysR substrate binding domain M0D45_12540 PF01026 TatD related DNase M0D45_12545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D45_12545 PF03466 LysR substrate binding domain M0D45_12550 PF07690 Major Facilitator Superfamily M0D45_12565 PF00561 alpha/beta hydrolase fold M0D45_12570 PF02146 Sir2 family M0D45_12575 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M0D45_12580 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M0D45_12580 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M0D45_12595 PF00551 Formyl transferase M0D45_12630 PF02677 Epoxyqueuosine reductase QueH M0D45_12635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D45_12635 PF03466 LysR substrate binding domain M0D45_12640 PF03358 NADPH-dependent FMN reductase M0D45_12650 PF01717 Cobalamin-independent synthase, Catalytic domain M0D45_12650 PF08267 Cobalamin-independent synthase, N-terminal domain M0D45_12655 PF03812 2-keto-3-deoxygluconate permease M0D45_12665 PF05368 NmrA-like family M0D45_12670 PF01638 HxlR-like helix-turn-helix M0D45_12715 PF00920 Dehydratase family M0D45_12720 PF03692 Putative zinc- or iron-chelating domain M0D45_12725 PF00132 Bacterial transferase hexapeptide (six repeats) M0D45_12735 PF07690 Major Facilitator Superfamily M0D45_12740 PF11871 Domain of unknown function (DUF3391) M0D45_12740 PF01966 HD domain M0D45_12760 PF00171 Aldehyde dehydrogenase family M0D45_12770 PF01494 FAD binding domain M0D45_12780 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M0D45_12780 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M0D45_12785 PF00230 Major intrinsic protein M0D45_12790 PF16901 C-terminal domain of alpha-glycerophosphate oxidase M0D45_12790 PF01266 FAD dependent oxidoreductase M0D45_12795 PF08220 DeoR-like helix-turn-helix domain M0D45_12795 PF00455 DeoR C terminal sensor domain M0D45_12805 PF00111 2Fe-2S iron-sulfur cluster binding domain M0D45_12805 PF00970 Oxidoreductase FAD-binding domain M0D45_12810 PF00355 Rieske [2Fe-2S] domain M0D45_12815 PF01144 Coenzyme A transferase M0D45_12820 PF01144 Coenzyme A transferase M0D45_12825 PF00108 Thiolase, N-terminal domain M0D45_12825 PF02803 Thiolase, C-terminal domain M0D45_12830 PF00775 Dioxygenase M0D45_12830 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal M0D45_12840 PF10397 Adenylosuccinate lyase C-terminus M0D45_12840 PF00206 Lyase M0D45_12845 PF12146 Serine aminopeptidase, S33 M0D45_12850 PF02627 Carboxymuconolactone decarboxylase family M0D45_12865 PF09339 IclR helix-turn-helix domain M0D45_12865 PF01614 Bacterial transcriptional regulator M0D45_12875 PF07859 alpha/beta hydrolase fold M0D45_12885 PF01134 Glucose inhibited division protein A M0D45_12885 PF13932 GidA associated domain M0D45_12900 PF00291 Pyridoxal-phosphate dependent enzyme M0D45_12920 PF13649 Methyltransferase domain M0D45_12930 PF12697 Alpha/beta hydrolase family M0D45_12940 PF00155 Aminotransferase class I and II M0D45_12945 PF06968 Biotin and Thiamin Synthesis associated domain M0D45_12945 PF04055 Radical SAM superfamily M0D45_12955 PF01040 UbiA prenyltransferase family M0D45_12970 PF05819 NolX protein M0D45_13010 PF01313 Bacterial export proteins, family 3 M0D45_13015 PF00813 FliP family M0D45_13030 PF00771 FHIPEP family M0D45_13035 PF01312 FlhB HrpN YscU SpaS Family M0D45_13050 PF01514 Secretory protein of YscJ/FliF family M0D45_13065 PF18269 T3SS EscN ATPase C-terminal domain M0D45_13065 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M0D45_13065 PF02874 ATP synthase alpha/beta family, beta-barrel domain M0D45_13075 PF01311 Bacterial export proteins, family 1 M0D45_13080 PF00263 Bacterial type II and III secretion system protein M0D45_13080 PF03958 Bacterial type II/III secretion system short domain M0D45_13090 PF01464 Transglycosylase SLT domain M0D45_13110 PF00924 Mechanosensitive ion channel M0D45_13110 PF12794 Mechanosensitive ion channel inner membrane domain 1 M0D45_13110 PF12795 Mechanosensitive ion channel porin domain M0D45_13115 PF00884 Sulfatase M0D45_13120 PF03109 ABC1 family M0D45_13125 PF05661 Protein of unknown function (DUF808) M0D45_13130 PF02638 Glycosyl hydrolase-like 10 M0D45_13135 PF00990 Diguanylate cyclase, GGDEF domain M0D45_13140 PF00534 Glycosyl transferases group 1 M0D45_13140 PF08323 Starch synthase catalytic domain M0D45_13145 PF00128 Alpha amylase, catalytic domain M0D45_13145 PF02806 Alpha amylase, C-terminal all-beta domain M0D45_13145 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) M0D45_13150 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) M0D45_13150 PF11941 Domain of unknown function (DUF3459) M0D45_13150 PF00128 Alpha amylase, catalytic domain M0D45_13155 PF02446 4-alpha-glucanotransferase M0D45_13160 PF00128 Alpha amylase, catalytic domain M0D45_13170 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) M0D45_13170 PF00128 Alpha amylase, catalytic domain M0D45_13175 PF13460 NAD(P)H-binding M0D45_13195 PF06903 VirK protein M0D45_13205 PF00271 Helicase conserved C-terminal domain M0D45_13205 PF00270 DEAD/DEAH box helicase M0D45_13215 PF02817 e3 binding domain M0D45_13215 PF00364 Biotin-requiring enzyme M0D45_13215 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M0D45_13225 PF02779 Transketolase, pyrimidine binding domain M0D45_13225 PF02780 Transketolase, C-terminal domain M0D45_13230 PF00676 Dehydrogenase E1 component M0D45_13240 PF03301 Tryptophan 2,3-dioxygenase M0D45_13245 PF00854 POT family M0D45_13255 PF01047 MarR family M0D45_13260 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M0D45_13265 PF04209 homogentisate 1,2-dioxygenase M0D45_13285 PF03334 Na+/H+ antiporter subunit M0D45_13290 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) M0D45_13300 PF00361 Proton-conducting membrane transporter M0D45_13305 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L M0D45_13310 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter M0D45_13310 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M0D45_13310 PF13244 Domain of unknown function (DUF4040) M0D45_13310 PF00361 Proton-conducting membrane transporter M0D45_13335 PF07504 Fungalysin/Thermolysin Propeptide Motif M0D45_13335 PF01483 Proprotein convertase P-domain M0D45_13335 PF01447 Thermolysin metallopeptidase, catalytic domain M0D45_13335 PF02868 Thermolysin metallopeptidase, alpha-helical domain M0D45_13350 PF01259 SAICAR synthetase M0D45_13355 PF05099 Tellurite resistance protein TerB M0D45_13355 PF00226 DnaJ domain M0D45_13365 PF00834 Ribulose-phosphate 3 epimerase family M0D45_13370 PF00583 Acetyltransferase (GNAT) family M0D45_13375 PF00781 Diacylglycerol kinase catalytic domain M0D45_13380 PF04715 Anthranilate synthase component I, N terminal region M0D45_13380 PF00425 chorismate binding enzyme M0D45_13395 PF00117 Glutamine amidotransferase class-I M0D45_13405 PF00591 Glycosyl transferase family, a/b domain M0D45_13405 PF02885 Glycosyl transferase family, helical bundle domain M0D45_13410 PF00218 Indole-3-glycerol phosphate synthase M0D45_13420 PF00325 Bacterial regulatory proteins, crp family M0D45_13420 PF00027 Cyclic nucleotide-binding domain M0D45_13425 PF02675 S-adenosylmethionine decarboxylase M0D45_13430 PF00893 Small Multidrug Resistance protein M0D45_13435 PF03232 Ubiquinone biosynthesis protein COQ7 M0D45_13440 PF00572 Ribosomal protein L13 M0D45_13445 PF00380 Ribosomal protein S9/S16 M0D45_13460 PF00293 NUDIX domain M0D45_13470 PF00210 Ferritin-like domain M0D45_13475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_13475 PF00672 HAMP domain M0D45_13475 PF00512 His Kinase A (phospho-acceptor) domain M0D45_13475 PF00072 Response regulator receiver domain M0D45_13475 PF01627 Hpt domain M0D45_13475 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M0D45_13480 PF00563 EAL domain M0D45_13480 PF00990 Diguanylate cyclase, GGDEF domain M0D45_13480 PF03707 Bacterial signalling protein N terminal repeat M0D45_13500 PF01521 Iron-sulphur cluster biosynthesis M0D45_13510 PF00293 NUDIX domain M0D45_13510 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain M0D45_13510 PF09297 NADH pyrophosphatase zinc ribbon domain M0D45_13515 PF03186 CobD/Cbib protein M0D45_13515 PF17113 Regulatory signalling modulator protein AmpE M0D45_13530 PF07690 Major Facilitator Superfamily M0D45_13535 PF03466 LysR substrate binding domain M0D45_13535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D45_13540 PF07690 Major Facilitator Superfamily M0D45_13545 PF12805 FUSC-like inner membrane protein yccS M0D45_13555 PF02843 Phosphoribosylglycinamide synthetase, C domain M0D45_13555 PF02844 Phosphoribosylglycinamide synthetase, N domain M0D45_13555 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain M0D45_13560 PF01808 AICARFT/IMPCHase bienzyme M0D45_13560 PF02142 MGS-like domain M0D45_13570 PF00818 Ice nucleation protein repeat M0D45_13570 PF00818 Ice nucleation protein repeat M0D45_13575 PF02954 Bacterial regulatory protein, Fis family M0D45_13585 PF01381 Helix-turn-helix M0D45_13620 PF02785 Biotin carboxylase C-terminal domain M0D45_13620 PF00289 Biotin carboxylase, N-terminal domain M0D45_13620 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M0D45_13630 PF00364 Biotin-requiring enzyme M0D45_13635 PF01220 Dehydroquinase class II M0D45_13640 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain M0D45_13640 PF00326 Prolyl oligopeptidase family M0D45_13645 PF11412 Disulphide bond corrector protein DsbC M0D45_13645 PF02683 Cytochrome C biogenesis protein transmembrane region M0D45_13650 PF03091 CutA1 divalent ion tolerance protein M0D45_13655 PF04231 Endonuclease I M0D45_13660 PF00166 Chaperonin 10 Kd subunit M0D45_13665 PF00118 TCP-1/cpn60 chaperonin family M0D45_13700 PF01609 Transposase DDE domain M0D45_13700 PF05598 Transposase domain (DUF772) M0D45_13705 PF00593 TonB dependent receptor M0D45_13705 PF07715 TonB-dependent Receptor Plug Domain M0D45_13715 PF00793 DAHP synthetase I family M0D45_13730 PF08450 SMP-30/Gluconolactonase/LRE-like region M0D45_13740 PF08335 GlnD PII-uridylyltransferase M0D45_13740 PF03710 Glutamate-ammonia ligase adenylyltransferase M0D45_13745 PF02592 Putative vitamin uptake transporter M0D45_13770 PF00881 Nitroreductase family M0D45_13775 PF04264 YceI-like domain M0D45_13805 PF03551 Transcriptional regulator PadR-like family M0D45_13805 PF13847 Methyltransferase domain M0D45_13810 PF16957 Malonate decarboxylase, alpha subunit, transporter M0D45_13815 PF06857 Malonate decarboxylase delta subunit (MdcD) M0D45_13820 PF01039 Carboxyl transferase domain M0D45_13830 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG M0D45_13835 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase M0D45_13840 PF00698 Acyl transferase domain M0D45_13850 PF07729 FCD domain M0D45_13850 PF00392 Bacterial regulatory proteins, gntR family M0D45_13885 PF07745 Glycosyl hydrolase family 53 M0D45_13890 PF17831 Pyruvate dehydrogenase E1 component middle domain M0D45_13890 PF00456 Transketolase, thiamine diphosphate binding domain M0D45_13900 PF02086 D12 class N6 adenine-specific DNA methyltransferase M0D45_13920 PF13276 HTH-like domain M0D45_13920 PF13333 Integrase core domain M0D45_13920 PF00665 Integrase core domain M0D45_13925 PF13276 HTH-like domain M0D45_13925 PF00665 Integrase core domain M0D45_13925 PF13333 Integrase core domain M0D45_13935 PF01527 Transposase M0D45_14045 PF00106 short chain dehydrogenase M0D45_14055 PF13409 Glutathione S-transferase, N-terminal domain M0D45_14075 PF12823 Domain of unknown function (DUF3817) M0D45_14075 PF03176 MMPL family M0D45_14095 PF07759 Protein of unknown function (DUF1615) M0D45_14130 PF00892 EamA-like transporter family M0D45_14135 PF03330 Lytic transglycolase M0D45_14140 PF00041 Fibronectin type III domain M0D45_14140 PF00553 Cellulose binding domain M0D45_14140 PF01341 Glycosyl hydrolases family 6 M0D45_14150 PF00324 Amino acid permease M0D45_14160 PF01544 CorA-like Mg2+ transporter protein M0D45_14175 PF01204 Trehalase M0D45_14185 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain M0D45_14185 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain M0D45_14205 PF03707 Bacterial signalling protein N terminal repeat M0D45_14205 PF00990 Diguanylate cyclase, GGDEF domain M0D45_14205 PF00563 EAL domain M0D45_14220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D45_14220 PF02203 Tar ligand binding domain homologue M0D45_14220 PF00672 HAMP domain M0D45_14225 PF00553 Cellulose binding domain M0D45_14225 PF00150 Cellulase (glycosyl hydrolase family 5) M0D45_14230 PF00916 Sulfate permease family M0D45_14230 PF01740 STAS domain M0D45_14235 PF00990 Diguanylate cyclase, GGDEF domain M0D45_14245 PF13632 Glycosyl transferase family group 2 M0D45_14255 PF07694 5TMR of 5TMR-LYT M0D45_14255 PF06580 Histidine kinase M0D45_14260 PF04397 LytTr DNA-binding domain M0D45_14260 PF00072 Response regulator receiver domain M0D45_14265 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain M0D45_14265 PF03900 Porphobilinogen deaminase, C-terminal domain M0D45_14290 PF00326 Prolyl oligopeptidase family M0D45_14290 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain M0D45_14305 PF00155 Aminotransferase class I and II M0D45_14310 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain M0D45_14310 PF00326 Prolyl oligopeptidase family M0D45_14315 PF04304 Protein of unknown function (DUF454) M0D45_14325 PF01678 Diaminopimelate epimerase M0D45_14335 PF00589 Phage integrase family M0D45_14335 PF02899 Phage integrase, N-terminal SAM-like domain M0D45_14340 PF00227 Proteasome subunit M0D45_14345 PF07724 AAA domain (Cdc48 subfamily) M0D45_14345 PF10431 C-terminal, D2-small domain, of ClpB protein M0D45_14345 PF00004 ATPase family associated with various cellular activities (AAA) M0D45_14355 PF13673 Acetyltransferase (GNAT) domain M0D45_14360 PF13533 Biotin-lipoyl like M0D45_14370 PF01209 ubiE/COQ5 methyltransferase family M0D45_14375 PF03707 Bacterial signalling protein N terminal repeat M0D45_14375 PF00990 Diguanylate cyclase, GGDEF domain M0D45_14375 PF00563 EAL domain M0D45_14380 PF01433 Peptidase family M1 domain M0D45_14380 PF11838 ERAP1-like C-terminal domain M0D45_14395 PF13360 PQQ-like domain M0D45_14400 PF00497 Bacterial extracellular solute-binding proteins, family 3 M0D45_14415 PF00107 Zinc-binding dehydrogenase M0D45_14415 PF08240 Alcohol dehydrogenase GroES-like domain M0D45_14425 PF01590 GAF domain M0D45_14425 PF00158 Sigma-54 interaction domain M0D45_14425 PF02954 Bacterial regulatory protein, Fis family M0D45_14440 PF00294 pfkB family carbohydrate kinase M0D45_14455 PF04085 rod shape-determining protein MreC M0D45_14465 PF00905 Penicillin binding protein transpeptidase domain M0D45_14465 PF03717 Penicillin-binding Protein dimerisation domain M0D45_14470 PF01098 Cell cycle protein M0D45_14480 PF00295 Glycosyl hydrolases family 28 M0D45_14485 PF13406 Transglycosylase SLT domain M0D45_14490 PF05036 Sporulation related domain M0D45_14490 PF03330 Lytic transglycolase M0D45_14495 PF00768 D-alanyl-D-alanine carboxypeptidase M0D45_14495 PF07943 Penicillin-binding protein 5, C-terminal domain M0D45_14505 PF04359 Protein of unknown function (DUF493) M0D45_14510 PF03099 Biotin/lipoate A/B protein ligase family M0D45_14515 PF04055 Radical SAM superfamily M0D45_14515 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family M0D45_14520 PF17804 Tail specific protease N-terminal domain M0D45_14520 PF00595 PDZ domain M0D45_14520 PF11818 C-terminal domain of tail specific protease (DUF3340) M0D45_14520 PF03572 Peptidase family S41 M0D45_14530 PF03466 LysR substrate binding domain M0D45_14530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D45_14540 PF00293 NUDIX domain M0D45_14540 PF01467 Cytidylyltransferase-like M0D45_14575 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain M0D45_14575 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M0D45_14580 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M0D45_14580 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M0D45_14585 PF04972 BON domain M0D45_14590 PF01590 GAF domain M0D45_14590 PF00360 Phytochrome region M0D45_14590 PF08446 PAS fold M0D45_14590 PF00512 His Kinase A (phospho-acceptor) domain M0D45_14590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_14595 PF00072 Response regulator receiver domain M0D45_14600 PF00512 His Kinase A (phospho-acceptor) domain M0D45_14600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_14605 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) M0D45_14610 PF00106 short chain dehydrogenase M0D45_14650 PF03958 Bacterial type II/III secretion system short domain M0D45_14650 PF00263 Bacterial type II and III secretion system protein M0D45_14655 PF00437 Type II/IV secretion system protein M0D45_14660 PF00482 Type II secretion system (T2SS), protein F M0D45_14665 PF08334 Type II secretion system (T2SS), protein G M0D45_14665 PF07963 Prokaryotic N-terminal methylation motif M0D45_14675 PF07963 Prokaryotic N-terminal methylation motif M0D45_14675 PF02501 Type II secretion system (T2SS), protein I M0D45_14680 PF11612 Type II secretion system (T2SS), protein J M0D45_14680 PF07963 Prokaryotic N-terminal methylation motif M0D45_14685 PF03934 Type II secretion system (T2SS), protein K M0D45_14710 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 M0D45_14710 PF00703 Glycosyl hydrolases family 2 M0D45_14710 PF02836 Glycosyl hydrolases family 2, TIM barrel domain M0D45_14710 PF02837 Glycosyl hydrolases family 2, sugar binding domain M0D45_14710 PF16355 Domain of unknown function (DUF4982) M0D45_14725 PF07702 UTRA domain M0D45_14725 PF00392 Bacterial regulatory proteins, gntR family M0D45_14730 PF07690 Major Facilitator Superfamily M0D45_14735 PF00356 Bacterial regulatory proteins, lacI family M0D45_14740 PF01380 SIS domain M0D45_14745 PF01979 Amidohydrolase family M0D45_14760 PF00535 Glycosyl transferase family 2 M0D45_14765 PF14883 Hypothetical glycosyl hydrolase family 13 M0D45_14765 PF01522 Polysaccharide deacetylase M0D45_14785 PF01966 HD domain M0D45_14785 PF01743 Poly A polymerase head domain M0D45_14785 PF12627 Probable RNA and SrmB- binding site of polymerase A M0D45_14790 PF01464 Transglycosylase SLT domain M0D45_14790 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain M0D45_14795 PF07715 TonB-dependent Receptor Plug Domain M0D45_14795 PF00593 TonB dependent receptor M0D45_14800 PF08264 Anticodon-binding domain of tRNA M0D45_14800 PF10458 Valyl tRNA synthetase tRNA binding arm M0D45_14800 PF00133 tRNA synthetases class I (I, L, M and V) M0D45_14815 PF00883 Cytosol aminopeptidase family, catalytic domain M0D45_14815 PF02789 Cytosol aminopeptidase family, N-terminal domain M0D45_14825 PF03739 Lipopolysaccharide export system permease LptF/LptG M0D45_14845 PF00589 Phage integrase family M0D45_14845 PF02899 Phage integrase, N-terminal SAM-like domain M0D45_14850 PF13098 Thioredoxin-like domain M0D45_14850 PF10411 Disulfide bond isomerase protein N-terminus M0D45_14855 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain M0D45_14855 PF02769 AIR synthase related protein, C-terminal domain M0D45_14855 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal M0D45_14865 PF05662 Coiled stalk of trimeric autotransporter adhesin M0D45_14865 PF05658 Head domain of trimeric autotransporter adhesin M0D45_14865 PF03895 YadA-like membrane anchor domain M0D45_14865 PF13018 Extended Signal Peptide of Type V secretion system M0D45_14870 PF00082 Subtilase family M0D45_14870 PF04151 Bacterial pre-peptidase C-terminal domain M0D45_14875 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M0D45_14875 PF00437 Type II/IV secretion system protein M0D45_14880 PF00482 Type II secretion system (T2SS), protein F M0D45_14885 PF08334 Type II secretion system (T2SS), protein G M0D45_14890 PF12019 Type II transport protein GspH M0D45_14895 PF07963 Prokaryotic N-terminal methylation motif M0D45_14905 PF03934 Type II secretion system (T2SS), protein K M0D45_14910 PF05137 Fimbrial assembly protein (PilN) M0D45_14915 PF10741 Type II secretion system (T2SS), protein M subtype b M0D45_14925 PF00263 Bacterial type II and III secretion system protein M0D45_14925 PF03958 Bacterial type II/III secretion system short domain M0D45_14935 PF07702 UTRA domain M0D45_14935 PF00392 Bacterial regulatory proteins, gntR family M0D45_14945 PF00593 TonB dependent receptor M0D45_14945 PF07715 TonB-dependent Receptor Plug Domain M0D45_14980 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family M0D45_14980 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain M0D45_14995 PF03960 ArsC family M0D45_15005 PF01327 Polypeptide deformylase M0D45_15010 PF00005 ABC transporter M0D45_15010 PF12848 ABC transporter M0D45_15030 PF00464 Serine hydroxymethyltransferase M0D45_15035 PF03477 ATP cone domain M0D45_15045 PF01872 RibD C-terminal domain M0D45_15045 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M0D45_15055 PF00677 Lumazine binding domain M0D45_15060 PF00925 GTP cyclohydrolase II M0D45_15060 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M0D45_15065 PF00885 6,7-dimethyl-8-ribityllumazine synthase M0D45_15070 PF01029 NusB family M0D45_15075 PF00586 AIR synthase related protein, N-terminal domain M0D45_15075 PF02769 AIR synthase related protein, C-terminal domain M0D45_15095 PF03814 Potassium-transporting ATPase A subunit M0D45_15105 PF02669 K+-transporting ATPase, c chain M0D45_15110 PF13493 Domain of unknown function (DUF4118) M0D45_15110 PF13492 GAF domain M0D45_15110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_15110 PF00512 His Kinase A (phospho-acceptor) domain M0D45_15110 PF02702 Osmosensitive K+ channel His kinase sensor domain M0D45_15115 PF00072 Response regulator receiver domain M0D45_15115 PF00486 Transcriptional regulatory protein, C terminal M0D45_15130 PF01565 FAD binding domain M0D45_15130 PF02913 FAD linked oxidases, C-terminal domain M0D45_15135 PF04307 LexA-binding, inner membrane-associated putative hydrolase M0D45_15140 PF02021 Uncharacterised protein family UPF0102 M0D45_15150 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M0D45_15170 PF02381 MraZ protein, putative antitoxin-like M0D45_15175 PF01795 MraW methylase family M0D45_15180 PF04999 Cell division protein FtsL M0D45_15185 PF03717 Penicillin-binding Protein dimerisation domain M0D45_15185 PF00905 Penicillin binding protein transpeptidase domain M0D45_15190 PF01225 Mur ligase family, catalytic domain M0D45_15190 PF02875 Mur ligase family, glutamate ligase domain M0D45_15190 PF08245 Mur ligase middle domain M0D45_15195 PF02875 Mur ligase family, glutamate ligase domain M0D45_15195 PF08245 Mur ligase middle domain M0D45_15195 PF01225 Mur ligase family, catalytic domain M0D45_15200 PF00953 Glycosyl transferase family 4 M0D45_15205 PF01098 Cell cycle protein M0D45_15210 PF04101 Glycosyltransferase family 28 C-terminal domain M0D45_15210 PF03033 Glycosyltransferase family 28 N-terminal domain M0D45_15215 PF02875 Mur ligase family, glutamate ligase domain M0D45_15215 PF08245 Mur ligase middle domain M0D45_15215 PF01225 Mur ligase family, catalytic domain M0D45_15220 PF07478 D-ala D-ala ligase C-terminus M0D45_15220 PF01820 D-ala D-ala ligase N-terminus M0D45_15225 PF03799 Cell division protein FtsQ M0D45_15225 PF08478 POTRA domain, FtsQ-type M0D45_15230 PF02491 SHS2 domain inserted in FTSA M0D45_15235 PF12327 FtsZ family, C-terminal domain M0D45_15235 PF00091 Tubulin/FtsZ family, GTPase domain M0D45_15240 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase M0D45_15250 PF08525 Opacity-associated protein A N-terminal motif M0D45_15250 PF01551 Peptidase family M23 M0D45_15250 PF01476 LysM domain M0D45_15255 PF01043 SecA preprotein cross-linking domain M0D45_15255 PF07516 SecA Wing and Scaffold domain M0D45_15255 PF02810 SEC-C motif M0D45_15255 PF07517 SecA DEAD-like domain M0D45_15265 PF00293 NUDIX domain M0D45_15275 PF02219 Methylenetetrahydrofolate reductase M0D45_15285 PF14765 Polyketide synthase dehydratase M0D45_15285 PF00550 Phosphopantetheine attachment site M0D45_15285 PF08659 KR domain M0D45_15285 PF00109 Beta-ketoacyl synthase, N-terminal domain M0D45_15285 PF16197 Ketoacyl-synthetase C-terminal extension M0D45_15285 PF00107 Zinc-binding dehydrogenase M0D45_15285 PF08240 Alcohol dehydrogenase GroES-like domain M0D45_15285 PF00698 Acyl transferase domain M0D45_15285 PF02801 Beta-ketoacyl synthase, C-terminal domain M0D45_15290 PF00082 Subtilase family M0D45_15290 PF09286 Pro-kumamolisin, activation domain M0D45_15300 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M0D45_15305 PF00128 Alpha amylase, catalytic domain M0D45_15335 PF00685 Sulfotransferase domain M0D45_15345 PF13649 Methyltransferase domain M0D45_15355 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain M0D45_15355 PF05221 S-adenosyl-L-homocysteine hydrolase M0D45_15365 PF00311 Phosphoenolpyruvate carboxylase M0D45_15400 PF00328 Histidine phosphatase superfamily (branch 2) M0D45_15405 PF02773 S-adenosylmethionine synthetase, C-terminal domain M0D45_15405 PF02772 S-adenosylmethionine synthetase, central domain M0D45_15405 PF00438 S-adenosylmethionine synthetase, N-terminal domain M0D45_15415 PF13649 Methyltransferase domain M0D45_15420 PF01207 Dihydrouridine synthase (Dus) M0D45_15435 PF00294 pfkB family carbohydrate kinase M0D45_15440 PF07662 Na+ dependent nucleoside transporter C-terminus M0D45_15440 PF01773 Na+ dependent nucleoside transporter N-terminus M0D45_15440 PF07670 Nucleoside recognition M0D45_15450 PF00248 Aldo/keto reductase family M0D45_15460 PF07715 TonB-dependent Receptor Plug Domain M0D45_15460 PF00593 TonB dependent receptor M0D45_15480 PF00528 Binding-protein-dependent transport system inner membrane component M0D45_15485 PF00005 ABC transporter M0D45_15495 PF02668 Taurine catabolism dioxygenase TauD, TfdA family M0D45_15505 PF00005 ABC transporter M0D45_15510 PF13472 GDSL-like Lipase/Acylhydrolase family M0D45_15515 PF00072 Response regulator receiver domain M0D45_15515 PF00486 Transcriptional regulatory protein, C terminal M0D45_15520 PF00512 His Kinase A (phospho-acceptor) domain M0D45_15520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_15520 PF08521 Two-component sensor kinase N-terminal M0D45_15530 PF01219 Prokaryotic diacylglycerol kinase M0D45_15550 PF01790 Prolipoprotein diacylglyceryl transferase M0D45_15555 PF00303 Thymidylate synthase M0D45_15565 PF00186 Dihydrofolate reductase M0D45_15570 PF00149 Calcineurin-like phosphoesterase M0D45_15575 PF04379 ApaG domain M0D45_15580 PF00398 Ribosomal RNA adenine dimethylase M0D45_15585 PF04166 Pyridoxal phosphate biosynthetic protein PdxA M0D45_15590 PF00639 PPIC-type PPIASE domain M0D45_15590 PF09312 SurA N-terminal domain M0D45_15595 PF04453 LPS transport system D M0D45_15595 PF03968 OstA-like protein M0D45_15600 PF00850 Histone deacetylase domain M0D45_15605 PF01923 Cobalamin adenosyltransferase M0D45_15620 PF01494 FAD binding domain M0D45_15625 PF01494 FAD binding domain M0D45_15630 PF12697 Alpha/beta hydrolase family M0D45_15645 PF07729 FCD domain M0D45_15645 PF00392 Bacterial regulatory proteins, gntR family M0D45_15650 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase M0D45_15655 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase M0D45_15655 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit M0D45_15660 PF03466 LysR substrate binding domain M0D45_15660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D45_15665 PF13193 AMP-binding enzyme C-terminal domain M0D45_15665 PF00501 AMP-binding enzyme M0D45_15670 PF00171 Aldehyde dehydrogenase family M0D45_15675 PF00378 Enoyl-CoA hydratase/isomerase M0D45_15700 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M0D45_15700 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M0D45_15705 PF01728 FtsJ-like methyltransferase M0D45_15705 PF18125 RlmM ferredoxin-like domain M0D45_15720 PF00892 EamA-like transporter family M0D45_15725 PF00749 tRNA synthetases class I (E and Q), catalytic domain M0D45_15725 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain M0D45_15740 PF00072 Response regulator receiver domain M0D45_15740 PF00990 Diguanylate cyclase, GGDEF domain M0D45_15745 PF01627 Hpt domain M0D45_15745 PF00072 Response regulator receiver domain M0D45_15745 PF00512 His Kinase A (phospho-acceptor) domain M0D45_15745 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M0D45_15745 PF00672 HAMP domain M0D45_15745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_15750 PF00072 Response regulator receiver domain M0D45_15750 PF00196 Bacterial regulatory proteins, luxR family M0D45_15760 PF01625 Peptide methionine sulfoxide reductase M0D45_15770 PF00923 Transaldolase/Fructose-6-phosphate aldolase M0D45_15775 PF14760 Rnk N-terminus M0D45_15775 PF01272 Transcription elongation factor, GreA/GreB, C-term M0D45_15785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D45_15785 PF03466 LysR substrate binding domain M0D45_15790 PF07992 Pyridine nucleotide-disulphide oxidoreductase M0D45_15790 PF13192 Thioredoxin domain M0D45_15795 PF10417 C-terminal domain of 1-Cys peroxiredoxin M0D45_15795 PF00578 AhpC/TSA family M0D45_15800 PF05175 Methyltransferase small domain M0D45_15800 PF17827 PrmC N-terminal domain M0D45_15815 PF00561 alpha/beta hydrolase fold M0D45_15825 PF00293 NUDIX domain M0D45_15830 PF01612 3'-5' exonuclease M0D45_15830 PF01367 5'-3' exonuclease, C-terminal SAM fold M0D45_15830 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M0D45_15830 PF00476 DNA polymerase family A M0D45_15855 PF01262 Alanine dehydrogenase/PNT, C-terminal domain M0D45_15855 PF05222 Alanine dehydrogenase/PNT, N-terminal domain M0D45_15855 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch M0D45_15875 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch M0D45_15880 PF02233 NAD(P) transhydrogenase beta subunit M0D45_15895 PF01063 Amino-transferase class IV M0D45_15900 PF00082 Subtilase family M0D45_15900 PF04151 Bacterial pre-peptidase C-terminal domain M0D45_15905 PF00082 Subtilase family M0D45_15905 PF04151 Bacterial pre-peptidase C-terminal domain M0D45_15910 PF00082 Subtilase family M0D45_15910 PF04151 Bacterial pre-peptidase C-terminal domain M0D45_15915 PF04073 Aminoacyl-tRNA editing domain M0D45_15925 PF17189 Glycosyl hydrolase family 30 beta sandwich domain M0D45_15925 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain M0D45_15940 PF03358 NADPH-dependent FMN reductase M0D45_15945 PF03631 Virulence factor BrkB M0D45_15950 PF08534 Redoxin M0D45_15955 PF00708 Acylphosphatase M0D45_15965 PF03976 Polyphosphate kinase 2 (PPK2) M0D45_15970 PF00994 Probable molybdopterin binding domain M0D45_15980 PF03462 PCRF domain M0D45_15980 PF00472 RF-1 domain M0D45_15995 PF03550 Outer membrane lipoprotein LolB M0D45_16000 PF00288 GHMP kinases N terminal domain M0D45_16000 PF08544 GHMP kinases C terminal M0D45_16010 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M0D45_16010 PF14572 Phosphoribosyl synthetase-associated domain M0D45_16015 PF01386 Ribosomal L25p family M0D45_16015 PF14693 Ribosomal protein TL5, C-terminal domain M0D45_16020 PF01195 Peptidyl-tRNA hydrolase M0D45_16025 PF06071 Protein of unknown function (DUF933) M0D45_16025 PF01926 50S ribosome-binding GTPase M0D45_16045 PF00009 Elongation factor Tu GTP binding domain M0D45_16045 PF03143 Elongation factor Tu C-terminal domain M0D45_16045 PF03144 Elongation factor Tu domain 2 M0D45_16055 PF00584 SecE/Sec61-gamma subunits of protein translocation complex M0D45_16060 PF00467 KOW motif M0D45_16060 PF02357 Transcription termination factor nusG M0D45_16065 PF00298 Ribosomal protein L11, RNA binding domain M0D45_16065 PF03946 Ribosomal protein L11, N-terminal domain M0D45_16070 PF00687 Ribosomal protein L1p/L10e family M0D45_16075 PF00466 Ribosomal protein L10 M0D45_16080 PF00542 Ribosomal protein L7/L12 C-terminal domain M0D45_16080 PF16320 Ribosomal protein L7/L12 dimerisation domain M0D45_16085 PF04560 RNA polymerase Rpb2, domain 7 M0D45_16085 PF04565 RNA polymerase Rpb2, domain 3 M0D45_16085 PF04561 RNA polymerase Rpb2, domain 2 M0D45_16085 PF10385 RNA polymerase beta subunit external 1 domain M0D45_16085 PF00562 RNA polymerase Rpb2, domain 6 M0D45_16085 PF04563 RNA polymerase beta subunit M0D45_16090 PF05000 RNA polymerase Rpb1, domain 4 M0D45_16090 PF04983 RNA polymerase Rpb1, domain 3 M0D45_16090 PF00623 RNA polymerase Rpb1, domain 2 M0D45_16090 PF04997 RNA polymerase Rpb1, domain 1 M0D45_16090 PF04998 RNA polymerase Rpb1, domain 5 M0D45_16095 PF00164 Ribosomal protein S12/S23 M0D45_16100 PF00177 Ribosomal protein S7p/S5e M0D45_16105 PF00679 Elongation factor G C-terminus M0D45_16105 PF14492 Elongation Factor G, domain II M0D45_16105 PF03764 Elongation factor G, domain IV M0D45_16105 PF00009 Elongation factor Tu GTP binding domain M0D45_16105 PF03144 Elongation factor Tu domain 2 M0D45_16110 PF00009 Elongation factor Tu GTP binding domain M0D45_16110 PF03143 Elongation factor Tu C-terminal domain M0D45_16110 PF03144 Elongation factor Tu domain 2 M0D45_16125 PF00338 Ribosomal protein S10p/S20e M0D45_16130 PF00297 Ribosomal protein L3 M0D45_16135 PF00573 Ribosomal protein L4/L1 family M0D45_16140 PF00276 Ribosomal protein L23 M0D45_16145 PF00181 Ribosomal Proteins L2, RNA binding domain M0D45_16145 PF03947 Ribosomal Proteins L2, C-terminal domain M0D45_16150 PF00203 Ribosomal protein S19 M0D45_16155 PF00237 Ribosomal protein L22p/L17e M0D45_16160 PF00189 Ribosomal protein S3, C-terminal domain M0D45_16160 PF07650 KH domain M0D45_16165 PF00252 Ribosomal protein L16p/L10e M0D45_16170 PF00831 Ribosomal L29 protein M0D45_16175 PF00366 Ribosomal protein S17 M0D45_16180 PF00238 Ribosomal protein L14p/L23e M0D45_16185 PF00467 KOW motif M0D45_16185 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 M0D45_16190 PF00673 ribosomal L5P family C-terminus M0D45_16190 PF00281 Ribosomal protein L5 M0D45_16195 PF00253 Ribosomal protein S14p/S29e M0D45_16200 PF00410 Ribosomal protein S8 M0D45_16205 PF00347 Ribosomal protein L6 M0D45_16210 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast M0D45_16215 PF03719 Ribosomal protein S5, C-terminal domain M0D45_16215 PF00333 Ribosomal protein S5, N-terminal domain M0D45_16220 PF00327 Ribosomal protein L30p/L7e M0D45_16225 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A M0D45_16230 PF00344 SecY translocase M0D45_16235 PF00416 Ribosomal protein S13/S18 M0D45_16240 PF00411 Ribosomal protein S11 M0D45_16245 PF00163 Ribosomal protein S4/S9 N-terminal domain M0D45_16245 PF01479 S4 domain M0D45_16250 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain M0D45_16250 PF01000 RNA polymerase Rpb3/RpoA insert domain M0D45_16250 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain M0D45_16255 PF01196 Ribosomal protein L17 M0D45_16260 PF02600 Disulfide bond formation protein DsbB M0D45_16270 PF01474 Class-II DAHP synthetase family M0D45_16280 PF01425 Amidase M0D45_16290 PF00009 Elongation factor Tu GTP binding domain M0D45_16290 PF03144 Elongation factor Tu domain 2 M0D45_16290 PF00679 Elongation factor G C-terminus M0D45_16295 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M0D45_16300 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain M0D45_16300 PF00056 lactate/malate dehydrogenase, NAD binding domain M0D45_16305 PF00043 Glutathione S-transferase, C-terminal domain M0D45_16305 PF02798 Glutathione S-transferase, N-terminal domain M0D45_16320 PF07992 Pyridine nucleotide-disulphide oxidoreductase M0D45_16320 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M0D45_16325 PF08240 Alcohol dehydrogenase GroES-like domain M0D45_16325 PF00107 Zinc-binding dehydrogenase M0D45_16330 PF00691 OmpA family M0D45_16330 PF00223 Photosystem I psaA/psaB protein M0D45_16340 PF00849 RNA pseudouridylate synthase M0D45_16350 PF00155 Aminotransferase class I and II M0D45_16360 PF00528 Binding-protein-dependent transport system inner membrane component M0D45_16365 PF00528 Binding-protein-dependent transport system inner membrane component M0D45_16370 PF00005 ABC transporter M0D45_16370 PF17850 CysA C-terminal regulatory domain M0D45_16370 PF12857 TOBE-like domain M0D45_16380 PF08240 Alcohol dehydrogenase GroES-like domain M0D45_16380 PF00107 Zinc-binding dehydrogenase M0D45_16390 PF04185 Phosphoesterase family M0D45_16390 PF05506 Domain of unknown function (DUF756) M0D45_16395 PF10459 Peptidase S46 M0D45_16400 PF00300 Histidine phosphatase superfamily (branch 1) M0D45_16415 PF08245 Mur ligase middle domain M0D45_16415 PF02875 Mur ligase family, glutamate ligase domain M0D45_16430 PF00156 Phosphoribosyl transferase domain M0D45_16440 PF04305 Protein of unknown function (DUF455) M0D45_16455 PF00149 Calcineurin-like phosphoesterase M0D45_16460 PF01569 PAP2 superfamily M0D45_16465 PF00534 Glycosyl transferases group 1 M0D45_16465 PF13439 Glycosyltransferase Family 4 M0D45_16470 PF02541 Ppx/GppA phosphatase family M0D45_16475 PF02503 Polyphosphate kinase middle domain M0D45_16475 PF13090 Polyphosphate kinase C-terminal domain 2 M0D45_16475 PF17941 Polyphosphate kinase C-terminal domain 1 M0D45_16475 PF13089 Polyphosphate kinase N-terminal domain M0D45_16480 PF00512 His Kinase A (phospho-acceptor) domain M0D45_16480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_16480 PF00989 PAS fold M0D45_16480 PF11808 Phosphate regulon sensor protein PhoR M0D45_16485 PF00072 Response regulator receiver domain M0D45_16485 PF00486 Transcriptional regulatory protein, C terminal M0D45_16490 PF01435 Peptidase family M48 M0D45_16490 PF13181 Tetratricopeptide repeat M0D45_16495 PF00462 Glutaredoxin M0D45_16505 PF00180 Isocitrate/isopropylmalate dehydrogenase M0D45_16505 PF18324 Hypothetical protein TT1725 M0D45_16545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_16545 PF13426 PAS domain M0D45_16545 PF00072 Response regulator receiver domain M0D45_16555 PF05698 Bacterial trigger factor protein (TF) C-terminus M0D45_16555 PF05697 Bacterial trigger factor protein (TF) M0D45_16560 PF00574 Clp protease M0D45_16565 PF07724 AAA domain (Cdc48 subfamily) M0D45_16565 PF10431 C-terminal, D2-small domain, of ClpB protein M0D45_16565 PF06689 ClpX C4-type zinc finger M0D45_16570 PF05362 Lon protease (S16) C-terminal proteolytic domain M0D45_16570 PF00004 ATPase family associated with various cellular activities (AAA) M0D45_16570 PF02190 ATP-dependent protease La (LON) substrate-binding domain M0D45_16575 PF00216 Bacterial DNA-binding protein M0D45_16600 PF01476 LysM domain M0D45_16600 PF05257 CHAP domain M0D45_16605 PF16123 Hydroxyacylglutathione hydrolase C-terminus M0D45_16605 PF00753 Metallo-beta-lactamase superfamily M0D45_16615 PF00075 RNase H M0D45_16620 PF00929 Exonuclease M0D45_16645 PF01075 Glycosyltransferase family 9 (heptosyltransferase) M0D45_16660 PF06463 Molybdenum Cofactor Synthesis C M0D45_16660 PF04055 Radical SAM superfamily M0D45_16670 PF01967 MoaC family M0D45_16675 PF02597 ThiS family M0D45_16680 PF02391 MoaE protein M0D45_16690 PF13356 Arm DNA-binding domain M0D45_16690 PF00589 Phage integrase family M0D45_16875 PF12169 DNA polymerase III subunits gamma and tau domain III M0D45_16875 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding M0D45_16875 PF12170 DNA polymerase III tau subunit V interacting with alpha M0D45_16880 PF02575 YbaB/EbfC DNA-binding family M0D45_16885 PF13662 Toprim domain M0D45_16885 PF02132 RecR protein M0D45_16890 PF01230 HIT domain M0D45_16900 PF13559 Domain of unknown function (DUF4129) M0D45_16900 PF11992 Domain of unknown function (DUF3488) M0D45_16900 PF01841 Transglutaminase-like superfamily M0D45_16910 PF07726 ATPase family associated with various cellular activities (AAA) M0D45_16910 PF17863 AAA lid domain M0D45_16925 PF02545 Maf-like protein M0D45_16930 PF02620 Large ribosomal RNA subunit accumulation protein YceD M0D45_16935 PF01783 Ribosomal L32p protein family M0D45_16940 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M0D45_16940 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M0D45_16950 PF00698 Acyl transferase domain M0D45_16960 PF00550 Phosphopantetheine attachment site M0D45_16965 PF02801 Beta-ketoacyl synthase, C-terminal domain M0D45_16965 PF00109 Beta-ketoacyl synthase, N-terminal domain M0D45_16970 PF04715 Anthranilate synthase component I, N terminal region M0D45_16970 PF00425 chorismate binding enzyme M0D45_16975 PF02618 YceG-like family M0D45_16980 PF09115 DNA polymerase III, delta subunit, C terminal M0D45_17000 PF00158 Sigma-54 interaction domain M0D45_17000 PF02954 Bacterial regulatory protein, Fis family M0D45_17000 PF06506 Propionate catabolism activator M0D45_17010 PF00285 Citrate synthase, C-terminal domain M0D45_17015 PF00330 Aconitase family (aconitate hydratase) M0D45_17015 PF00694 Aconitase C-terminal domain M0D45_17020 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH M0D45_17030 PF04303 PrpF protein M0D45_17035 PF07715 TonB-dependent Receptor Plug Domain M0D45_17035 PF00593 TonB dependent receptor M0D45_17045 PF17962 Bacterial macroglobulin domain 6 M0D45_17045 PF01835 MG2 domain M0D45_17045 PF11974 Bacterial alpha-2-macroglobulin MG3 domain M0D45_17045 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain M0D45_17045 PF00207 Alpha-2-macroglobulin family M0D45_17045 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain M0D45_17045 PF07703 Alpha-2-macroglobulin bait region domain M0D45_17045 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain M0D45_17060 PF00905 Penicillin binding protein transpeptidase domain M0D45_17060 PF06832 Penicillin-Binding Protein C-terminus Family M0D45_17060 PF00912 Transglycosylase M0D45_17070 PF08534 Redoxin M0D45_17080 PF00226 DnaJ domain M0D45_17080 PF01556 DnaJ C terminal domain M0D45_17085 PF00072 Response regulator receiver domain M0D45_17090 PF01145 SPFH domain / Band 7 family M0D45_17090 PF12221 Bacterial membrane protein N terminal M0D45_17095 PF01145 SPFH domain / Band 7 family M0D45_17110 PF00709 Adenylosuccinate synthetase M0D45_17115 PF11838 ERAP1-like C-terminal domain M0D45_17115 PF01433 Peptidase family M1 domain M0D45_17135 PF00440 Bacterial regulatory proteins, tetR family M0D45_17165 PF12161 HsdM N-terminal domain M0D45_17165 PF02384 N-6 DNA Methylase M0D45_17175 PF01420 Type I restriction modification DNA specificity domain M0D45_17180 PF12008 Type I restriction and modification enzyme - subunit R C terminal M0D45_17180 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) M0D45_17180 PF18766 SWI2/SNF2 ATPase M0D45_17215 PF00300 Histidine phosphatase superfamily (branch 1) M0D45_17215 PF13456 Reverse transcriptase-like M0D45_17240 PF07971 Glycosyl hydrolase family 92 M0D45_17240 PF17678 Glycosyl hydrolase family 92 N-terminal domain M0D45_17250 PF07992 Pyridine nucleotide-disulphide oxidoreductase M0D45_17270 PF17755 UvrA DNA-binding domain M0D45_17275 PF00107 Zinc-binding dehydrogenase M0D45_17275 PF08240 Alcohol dehydrogenase GroES-like domain M0D45_17285 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain M0D45_17285 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase M0D45_17290 PF03450 CO dehydrogenase flavoprotein C-terminal domain M0D45_17290 PF00941 FAD binding domain in molybdopterin dehydrogenase M0D45_17295 PF00111 2Fe-2S iron-sulfur cluster binding domain M0D45_17295 PF01799 [2Fe-2S] binding domain M0D45_17330 PF00717 Peptidase S24-like M0D45_17330 PF01726 LexA DNA binding domain M0D45_17345 PF07733 Bacterial DNA polymerase III alpha NTPase domain M0D45_17345 PF14579 Helix-hairpin-helix motif M0D45_17345 PF02811 PHP domain M0D45_17345 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M0D45_17370 PF03169 OPT oligopeptide transporter protein M0D45_17380 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region M0D45_17380 PF00326 Prolyl oligopeptidase family M0D45_17380 PF07676 WD40-like Beta Propeller Repeat M0D45_17390 PF02311 AraC-like ligand binding domain M0D45_17390 PF12833 Helix-turn-helix domain M0D45_17415 PF00199 Catalase M0D45_17415 PF18011 C-terminal domain found in long catalases M0D45_17415 PF06628 Catalase-related immune-responsive M0D45_17420 PF00248 Aldo/keto reductase family M0D45_17425 PF00135 Carboxylesterase family M0D45_17430 PF02347 Glycine cleavage system P-protein M0D45_17450 PF00664 ABC transporter transmembrane region M0D45_17450 PF00005 ABC transporter M0D45_17450 PF03412 Peptidase C39 family M0D45_17455 PF07690 Major Facilitator Superfamily M0D45_17470 PF00884 Sulfatase M0D45_17470 PF08019 Phosphoethanolamine transferase EptA/EptB M0D45_17480 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase M0D45_17485 PF00072 Response regulator receiver domain M0D45_17485 PF00486 Transcriptional regulatory protein, C terminal M0D45_17490 PF08521 Two-component sensor kinase N-terminal M0D45_17490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_17490 PF00512 His Kinase A (phospho-acceptor) domain M0D45_17500 PF03776 Septum formation topological specificity factor MinE M0D45_17505 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain M0D45_17510 PF05209 Septum formation inhibitor MinC, N-terminal domain M0D45_17510 PF03775 Septum formation inhibitor MinC, C-terminal domain M0D45_17520 PF07730 Histidine kinase M0D45_17525 PF00196 Bacterial regulatory proteins, luxR family M0D45_17525 PF00072 Response regulator receiver domain M0D45_17540 PF00730 HhH-GPD superfamily base excision DNA repair protein M0D45_17555 PF13026 Protein of unknown function (DUF3887) M0D45_17555 PF12146 Serine aminopeptidase, S33 M0D45_17580 PF02222 ATP-grasp domain M0D45_17600 PF04377 Arginine-tRNA-protein transferase, C terminus M0D45_17600 PF04376 Arginine-tRNA-protein transferase, N terminus M0D45_17615 PF08281 Sigma-70, region 4 M0D45_17615 PF04542 Sigma-70 region 2 M0D45_17630 PF00378 Enoyl-CoA hydratase/isomerase M0D45_17645 PF00005 ABC transporter M0D45_17645 PF17760 UvrA interaction domain M0D45_17645 PF17755 UvrA DNA-binding domain M0D45_17650 PF00829 Ribosomal prokaryotic L21 protein M0D45_17655 PF01016 Ribosomal L27 protein M0D45_17665 PF01649 Ribosomal protein S20 M0D45_17670 PF03023 Lipid II flippase MurJ M0D45_17675 PF01687 Riboflavin kinase M0D45_17675 PF06574 FAD synthetase M0D45_17680 PF06827 Zinc finger found in FPG and IleRS M0D45_17680 PF00133 tRNA synthetases class I (I, L, M and V) M0D45_17680 PF08264 Anticodon-binding domain of tRNA M0D45_17685 PF01252 Signal peptidase (SPase) II M0D45_17690 PF02401 LytB protein M0D45_17700 PF06481 COX Aromatic Rich Motif M0D45_17700 PF00116 Cytochrome C oxidase subunit II, periplasmic domain M0D45_17705 PF00115 Cytochrome C and Quinol oxidase polypeptide I M0D45_17710 PF00510 Cytochrome c oxidase subunit III M0D45_17715 PF03626 Prokaryotic Cytochrome C oxidase subunit IV M0D45_17725 PF00155 Aminotransferase class I and II M0D45_17730 PF18073 Rubredoxin metal binding domain M0D45_17745 PF12833 Helix-turn-helix domain M0D45_17750 PF00183 Hsp90 protein M0D45_17750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_17760 PF01740 STAS domain M0D45_17760 PF08678 Rsbr N terminal M0D45_17765 PF01740 STAS domain M0D45_17770 PF13581 Histidine kinase-like ATPase domain M0D45_17780 PF17149 Periplasmic sensor domain found in signal transduction proteins M0D45_17780 PF00672 HAMP domain M0D45_17780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_17780 PF00512 His Kinase A (phospho-acceptor) domain M0D45_17780 PF01627 Hpt domain M0D45_17780 PF00072 Response regulator receiver domain M0D45_17785 PF13188 PAS domain M0D45_17785 PF00072 Response regulator receiver domain M0D45_17785 PF08448 PAS fold M0D45_17785 PF00512 His Kinase A (phospho-acceptor) domain M0D45_17785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_17790 PF04616 Glycosyl hydrolases family 43 M0D45_17790 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain M0D45_17795 PF07715 TonB-dependent Receptor Plug Domain M0D45_17795 PF00593 TonB dependent receptor M0D45_17800 PF00085 Thioredoxin M0D45_17805 PF07237 Protein of unknown function (DUF1428) M0D45_17810 PF00990 Diguanylate cyclase, GGDEF domain M0D45_17810 PF00072 Response regulator receiver domain M0D45_17815 PF01339 CheB methylesterase M0D45_17820 PF03705 CheR methyltransferase, all-alpha domain M0D45_17820 PF01739 CheR methyltransferase, SAM binding domain M0D45_17825 PF00672 HAMP domain M0D45_17825 PF00072 Response regulator receiver domain M0D45_17825 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M0D45_17825 PF01627 Hpt domain M0D45_17825 PF00512 His Kinase A (phospho-acceptor) domain M0D45_17825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_17830 PF00072 Response regulator receiver domain M0D45_17830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_17830 PF13426 PAS domain M0D45_17835 PF00072 Response regulator receiver domain M0D45_17850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D45_17850 PF03466 LysR substrate binding domain M0D45_17855 PF06964 Alpha-L-arabinofuranosidase C-terminal domain M0D45_17860 PF01263 Aldose 1-epimerase M0D45_17865 PF01578 Cytochrome C assembly protein M0D45_17870 PF00448 SRP54-type protein, GTPase domain M0D45_17870 PF02881 SRP54-type protein, helical bundle domain M0D45_17870 PF02978 Signal peptide binding domain M0D45_17875 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) M0D45_17880 PF03060 Nitronate monooxygenase M0D45_17890 PF00886 Ribosomal protein S16 M0D45_17895 PF01782 RimM N-terminal domain M0D45_17895 PF05239 PRC-barrel domain M0D45_17900 PF01746 tRNA (Guanine-1)-methyltransferase M0D45_17905 PF01245 Ribosomal protein L19 M0D45_17910 PF01554 MatE M0D45_17915 PF01479 S4 domain M0D45_17920 PF00141 Peroxidase M0D45_17940 PF07715 TonB-dependent Receptor Plug Domain M0D45_17940 PF00593 TonB dependent receptor M0D45_17950 PF02492 CobW/HypB/UreG, nucleotide-binding domain M0D45_17950 PF07683 Cobalamin synthesis protein cobW C-terminal domain M0D45_17955 PF01297 Zinc-uptake complex component A periplasmic M0D45_17960 PF00950 ABC 3 transport family M0D45_17965 PF00005 ABC transporter M0D45_17970 PF05190 MutS family domain IV M0D45_17970 PF00488 MutS domain V M0D45_17970 PF05188 MutS domain II M0D45_17970 PF01624 MutS domain I M0D45_17970 PF05192 MutS domain III M0D45_17985 PF00703 Glycosyl hydrolases family 2 M0D45_17985 PF02837 Glycosyl hydrolases family 2, sugar binding domain M0D45_17985 PF02836 Glycosyl hydrolases family 2, TIM barrel domain M0D45_17985 PF16355 Domain of unknown function (DUF4982) M0D45_17985 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 M0D45_18000 PF09856 Predicted transcriptional regulator (DUF2083) M0D45_18000 PF06114 IrrE N-terminal-like domain M0D45_18000 PF01381 Helix-turn-helix M0D45_18005 PF00171 Aldehyde dehydrogenase family M0D45_18010 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M0D45_18010 PF02770 Acyl-CoA dehydrogenase, middle domain M0D45_18010 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M0D45_18015 PF00378 Enoyl-CoA hydratase/isomerase M0D45_18020 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M0D45_18020 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M0D45_18020 PF00378 Enoyl-CoA hydratase/isomerase M0D45_18025 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M0D45_18025 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M0D45_18035 PF01545 Cation efflux family M0D45_18040 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M0D45_18040 PF00378 Enoyl-CoA hydratase/isomerase M0D45_18040 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M0D45_18045 PF08281 Sigma-70, region 4 M0D45_18045 PF04542 Sigma-70 region 2 M0D45_18055 PF13180 PDZ domain M0D45_18060 PF00679 Elongation factor G C-terminus M0D45_18060 PF00009 Elongation factor Tu GTP binding domain M0D45_18060 PF03144 Elongation factor Tu domain 2 M0D45_18060 PF06421 GTP-binding protein LepA C-terminus M0D45_18065 PF10502 Signal peptidase, peptidase S26 M0D45_18075 PF14622 Ribonuclease-III-like M0D45_18075 PF00035 Double-stranded RNA binding motif M0D45_18080 PF07650 KH domain M0D45_18080 PF01926 50S ribosome-binding GTPase M0D45_18085 PF02565 Recombination protein O C terminal M0D45_18085 PF11967 Recombination protein O N terminal M0D45_18095 PF05958 tRNA (Uracil-5-)-methyltransferase M0D45_18100 PF01928 CYTH domain M0D45_18105 PF01323 DSBA-like thioredoxin domain M0D45_18110 PF01593 Flavin containing amine oxidoreductase M0D45_18115 PF04244 Deoxyribodipyrimidine photo-lyase-related protein M0D45_18120 PF00933 Glycosyl hydrolase family 3 N terminal domain M0D45_18125 PF00156 Phosphoribosyl transferase domain M0D45_18130 PF01048 Phosphorylase superfamily M0D45_18135 PF00313 'Cold-shock' DNA-binding domain M0D45_18140 PF01494 FAD binding domain M0D45_18145 PF01494 FAD binding domain M0D45_18155 PF00271 Helicase conserved C-terminal domain M0D45_18155 PF00270 DEAD/DEAH box helicase M0D45_18155 PF08494 DEAD/H associated M0D45_18160 PF04679 ATP dependent DNA ligase C terminal region M0D45_18160 PF01068 ATP dependent DNA ligase domain M0D45_18160 PF04675 DNA ligase N terminus M0D45_18170 PF04679 ATP dependent DNA ligase C terminal region M0D45_18170 PF01068 ATP dependent DNA ligase domain M0D45_18170 PF04675 DNA ligase N terminus M0D45_18185 PF00072 Response regulator receiver domain M0D45_18185 PF00990 Diguanylate cyclase, GGDEF domain M0D45_18200 PF00108 Thiolase, N-terminal domain M0D45_18200 PF02803 Thiolase, C-terminal domain M0D45_18205 PF12951 Passenger-associated-transport-repeat M0D45_18205 PF03797 Autotransporter beta-domain M0D45_18205 PF00082 Subtilase family M0D45_18210 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M0D45_18210 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M0D45_18220 PF01863 Protein of unknown function DUF45 M0D45_18225 PF07043 Protein of unknown function (DUF1328) M0D45_18235 PF01258 Prokaryotic dksA/traR C4-type zinc finger M0D45_18245 PF08281 Sigma-70, region 4 M0D45_18245 PF04542 Sigma-70 region 2 M0D45_18270 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M0D45_18280 PF08274 PhnA Zinc-Ribbon M0D45_18280 PF03831 PhnA domain M0D45_18285 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M0D45_18290 PF07690 Major Facilitator Superfamily M0D45_18325 PF09924 Uncharacterised conserved protein (DUF2156) M0D45_18325 PF03706 Lysylphosphatidylglycerol synthase TM region M0D45_18335 PF01042 Endoribonuclease L-PSP M0D45_18380 PF04542 Sigma-70 region 2 M0D45_18380 PF04545 Sigma-70, region 4 M0D45_18395 PF04060 Putative Fe-S cluster M0D45_18405 PF01588 Putative tRNA binding domain M0D45_18405 PF09334 tRNA synthetases class I (M) M0D45_18420 PF00005 ABC transporter M0D45_18420 PF13732 Domain of unknown function (DUF4162) M0D45_18425 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M0D45_18430 PF00324 Amino acid permease M0D45_18435 PF02574 Homocysteine S-methyltransferase M0D45_18440 PF01636 Phosphotransferase enzyme family M0D45_18455 PF02592 Putative vitamin uptake transporter M0D45_18475 PF03551 Transcriptional regulator PadR-like family M0D45_18495 PF03653 Uncharacterised protein family (UPF0093) M0D45_18500 PF10947 Protein of unknown function (DUF2628) M0D45_18515 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit M0D45_18520 PF07733 Bacterial DNA polymerase III alpha NTPase domain M0D45_18520 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M0D45_18520 PF14579 Helix-hairpin-helix motif M0D45_18520 PF02811 PHP domain M0D45_18520 PF01336 OB-fold nucleic acid binding domain M0D45_18525 PF01351 Ribonuclease HII M0D45_18530 PF02684 Lipid-A-disaccharide synthetase M0D45_18535 PF00132 Bacterial transferase hexapeptide (six repeats) M0D45_18535 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 M0D45_18540 PF07977 FabA-like domain M0D45_18545 PF00132 Bacterial transferase hexapeptide (six repeats) M0D45_18545 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD M0D45_18555 PF01103 Surface antigen M0D45_18555 PF07244 Surface antigen variable number repeat M0D45_18560 PF02163 Peptidase family M50 M0D45_18560 PF17820 PDZ domain M0D45_18565 PF13288 DXP reductoisomerase C-terminal domain M0D45_18565 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase M0D45_18565 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain M0D45_18575 PF01255 Putative undecaprenyl diphosphate synthase M0D45_18580 PF01765 Ribosome recycling factor M0D45_18585 PF00696 Amino acid kinase family M0D45_18590 PF00072 Response regulator receiver domain M0D45_18590 PF00990 Diguanylate cyclase, GGDEF domain M0D45_18595 PF00889 Elongation factor TS M0D45_18600 PF00318 Ribosomal protein S2 M0D45_18635 PF00557 Metallopeptidase family M24 M0D45_18640 PF01909 Nucleotidyltransferase domain M0D45_18640 PF08335 GlnD PII-uridylyltransferase M0D45_18640 PF01966 HD domain M0D45_18645 PF00132 Bacterial transferase hexapeptide (six repeats) M0D45_18645 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal M0D45_18645 PF14602 Hexapeptide repeat of succinyl-transferase M0D45_18655 PF03960 ArsC family M0D45_18665 PF01546 Peptidase family M20/M25/M40 M0D45_18665 PF07687 Peptidase dimerisation domain M0D45_18670 PF00733 Asparagine synthase M0D45_18670 PF13537 Glutamine amidotransferase domain M0D45_18680 PF00593 TonB dependent receptor M0D45_18680 PF07715 TonB-dependent Receptor Plug Domain M0D45_18685 PF00106 short chain dehydrogenase M0D45_18695 PF01804 Penicillin amidase M0D45_18700 PF00210 Ferritin-like domain M0D45_18705 PF05724 Thiopurine S-methyltransferase (TPMT) M0D45_18710 PF00521 DNA gyrase/topoisomerase IV, subunit A M0D45_18710 PF03989 DNA gyrase C-terminal domain, beta-propeller M0D45_18725 PF02321 Outer membrane efflux protein M0D45_18730 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M0D45_18730 PF00529 HlyD membrane-fusion protein of T1SS M0D45_18735 PF07690 Major Facilitator Superfamily M0D45_18740 PF00144 Beta-lactamase M0D45_18755 PF00933 Glycosyl hydrolase family 3 N terminal domain M0D45_18755 PF01915 Glycosyl hydrolase family 3 C-terminal domain M0D45_18755 PF14310 Fibronectin type III-like domain M0D45_18765 PF00854 POT family M0D45_18800 PF04542 Sigma-70 region 2 M0D45_18800 PF08281 Sigma-70, region 4 M0D45_18805 PF00082 Subtilase family M0D45_18815 PF01432 Peptidase family M3 M0D45_18820 PF00255 Glutathione peroxidase M0D45_18825 PF00970 Oxidoreductase FAD-binding domain M0D45_18825 PF00175 Oxidoreductase NAD-binding domain M0D45_18830 PF00005 ABC transporter M0D45_18835 PF05681 Fumarate hydratase (Fumerase) M0D45_18835 PF05683 Fumarase C-terminus M0D45_18845 PF02253 Phospholipase A1 M0D45_18855 PF05598 Transposase domain (DUF772) M0D45_18875 PF13291 ACT domain M0D45_18875 PF00291 Pyridoxal-phosphate dependent enzyme M0D45_18900 PF00313 'Cold-shock' DNA-binding domain M0D45_18915 PF00899 ThiF family M0D45_18920 PF01026 TatD related DNase M0D45_18935 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M0D45_18935 PF02770 Acyl-CoA dehydrogenase, middle domain M0D45_18935 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M0D45_18945 PF00043 Glutathione S-transferase, C-terminal domain M0D45_18945 PF02798 Glutathione S-transferase, N-terminal domain M0D45_18955 PF00733 Asparagine synthase M0D45_18955 PF13537 Glutamine amidotransferase domain M0D45_18960 PF03358 NADPH-dependent FMN reductase M0D45_18965 PF00772 DnaB-like helicase N terminal domain M0D45_18965 PF03796 DnaB-like helicase C terminal domain M0D45_18970 PF03441 FAD binding domain of DNA photolyase M0D45_18970 PF00875 DNA photolyase M0D45_18975 PF00691 OmpA family M0D45_18975 PF05736 OprF membrane domain M0D45_18980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D45_18980 PF03466 LysR substrate binding domain M0D45_18995 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M0D45_18995 PF00529 HlyD membrane-fusion protein of T1SS M0D45_19000 PF00873 AcrB/AcrD/AcrF family M0D45_19005 PF00106 short chain dehydrogenase M0D45_19010 PF02321 Outer membrane efflux protein M0D45_19015 PF00990 Diguanylate cyclase, GGDEF domain M0D45_19025 PF00990 Diguanylate cyclase, GGDEF domain M0D45_19055 PF00082 Subtilase family M0D45_19060 PF01668 SmpB protein M0D45_19065 PF03364 Polyketide cyclase / dehydrase and lipid transport M0D45_19070 PF03658 RnfH family Ubiquitin M0D45_19075 PF04355 SmpA / OmlA family M0D45_19080 PF01475 Ferric uptake regulator family M0D45_19085 PF02463 RecF/RecN/SMC N terminal domain M0D45_19090 PF01628 HrcA protein C terminal domain M0D45_19090 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding M0D45_19095 PF01025 GrpE M0D45_19100 PF00012 Hsp70 protein M0D45_19115 PF08543 Phosphomethylpyrimidine kinase M0D45_19140 PF00664 ABC transporter transmembrane region M0D45_19140 PF00005 ABC transporter M0D45_19140 PF03412 Peptidase C39 family M0D45_19145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D45_19145 PF03466 LysR substrate binding domain M0D45_19155 PF00664 ABC transporter transmembrane region M0D45_19155 PF00005 ABC transporter M0D45_19160 PF01205 Uncharacterized protein family UPF0029 M0D45_19165 PF03641 Possible lysine decarboxylase M0D45_19175 PF07992 Pyridine nucleotide-disulphide oxidoreductase M0D45_19175 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M0D45_19180 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M0D45_19180 PF00364 Biotin-requiring enzyme M0D45_19180 PF02817 e3 binding domain M0D45_19185 PF02779 Transketolase, pyrimidine binding domain M0D45_19185 PF16870 2-oxoglutarate dehydrogenase C-terminal M0D45_19185 PF16078 2-oxoglutarate dehydrogenase N-terminus M0D45_19185 PF00676 Dehydrogenase E1 component M0D45_19195 PF08007 Cupin superfamily protein M0D45_19210 PF08328 Adenylosuccinate lyase C-terminal M0D45_19210 PF00206 Lyase M0D45_19220 PF00571 CBS domain M0D45_19220 PF03471 Transporter associated domain M0D45_19220 PF01595 Cyclin M transmembrane N-terminal domain M0D45_19225 PF10415 Fumarase C C-terminus M0D45_19225 PF00206 Lyase M0D45_19255 PF00005 ABC transporter M0D45_19260 PF00392 Bacterial regulatory proteins, gntR family M0D45_19270 PF00255 Glutathione peroxidase M0D45_19275 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M0D45_19275 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M0D45_19280 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M0D45_19280 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M0D45_19280 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M0D45_19285 PF04102 SlyX M0D45_19300 PF00356 Bacterial regulatory proteins, lacI family M0D45_19305 PF07690 Major Facilitator Superfamily M0D45_19310 PF00294 pfkB family carbohydrate kinase M0D45_19320 PF02965 Vitamin B12 dependent methionine synthase, activation domain M0D45_19320 PF02574 Homocysteine S-methyltransferase M0D45_19320 PF02607 B12 binding domain M0D45_19320 PF02310 B12 binding domain M0D45_19320 PF00809 Pterin binding enzyme M0D45_19330 PF00809 Pterin binding enzyme M0D45_19330 PF02574 Homocysteine S-methyltransferase M0D45_19335 PF01209 ubiE/COQ5 methyltransferase family M0D45_19340 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M0D45_19340 PF02770 Acyl-CoA dehydrogenase, middle domain M0D45_19340 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M0D45_19355 PF00575 S1 RNA binding domain M0D45_19355 PF00773 RNB domain M0D45_19355 PF17876 Cold shock domain M0D45_19355 PF08461 Ribonuclease R winged-helix domain M0D45_19355 PF08206 Ribonuclease B OB domain M0D45_19365 PF00588 SpoU rRNA Methylase family M0D45_19365 PF08032 RNA 2'-O ribose methyltransferase substrate binding M0D45_19370 PF00990 Diguanylate cyclase, GGDEF domain M0D45_19375 PF00929 Exonuclease M0D45_19385 PF01895 PhoU domain M0D45_19390 PF00005 ABC transporter M0D45_19395 PF00528 Binding-protein-dependent transport system inner membrane component M0D45_19400 PF00528 Binding-protein-dependent transport system inner membrane component M0D45_19405 PF12849 PBP superfamily domain M0D45_19410 PF12849 PBP superfamily domain M0D45_19425 PF00484 Carbonic anhydrase M0D45_19430 PF00916 Sulfate permease family M0D45_19430 PF01740 STAS domain M0D45_19435 PF10576 Iron-sulfur binding domain of endonuclease III M0D45_19435 PF00633 Helix-hairpin-helix motif M0D45_19435 PF00730 HhH-GPD superfamily base excision DNA repair protein M0D45_19445 PF00378 Enoyl-CoA hydratase/isomerase M0D45_19450 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M0D45_19450 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M0D45_19455 PF00293 NUDIX domain M0D45_19460 PF00581 Rhodanese-like domain M0D45_19495 PF10672 S-adenosylmethionine-dependent methyltransferase M0D45_19495 PF02926 THUMP domain M0D45_19495 PF01170 Putative RNA methylase family UPF0020 M0D45_19500 PF01513 ATP-NAD kinase M0D45_19515 PF00248 Aldo/keto reductase family M0D45_19525 PF08411 Exonuclease C-terminal M0D45_19525 PF00929 Exonuclease M0D45_19530 PF01494 FAD binding domain M0D45_19535 PF00266 Aminotransferase class-V M0D45_19545 PF06052 3-hydroxyanthranilic acid dioxygenase M0D45_19550 PF00484 Carbonic anhydrase M0D45_19575 PF00152 tRNA synthetases class II (D, K and N) M0D45_19575 PF01336 OB-fold nucleic acid binding domain M0D45_19580 PF01521 Iron-sulphur cluster biosynthesis M0D45_19585 PF01250 Ribosomal protein S6 M0D45_19590 PF01084 Ribosomal protein S18 M0D45_19595 PF03948 Ribosomal protein L9, C-terminal domain M0D45_19595 PF01281 Ribosomal protein L9, N-terminal domain M0D45_19600 PF02463 RecF/RecN/SMC N terminal domain M0D45_19605 PF04354 ZipA, C-terminal FtsZ-binding domain M0D45_19615 PF00155 Aminotransferase class I and II M0D45_19620 PF03119 NAD-dependent DNA ligase C4 zinc finger domain M0D45_19620 PF12826 Helix-hairpin-helix motif M0D45_19620 PF03120 NAD-dependent DNA ligase OB-fold domain M0D45_19620 PF00533 BRCA1 C Terminus (BRCT) domain M0D45_19620 PF01653 NAD-dependent DNA ligase adenylation domain M0D45_19625 PF00152 tRNA synthetases class II (D, K and N) M0D45_19640 PF01008 Initiation factor 2 subunit family M0D45_19645 PF03989 DNA gyrase C-terminal domain, beta-propeller M0D45_19645 PF00521 DNA gyrase/topoisomerase IV, subunit A M0D45_19655 PF13360 PQQ-like domain M0D45_19670 PF01175 Urocanase Rossmann-like domain M0D45_19670 PF17392 Urocanase C-terminal domain M0D45_19670 PF17391 Urocanase N-terminal domain M0D45_19680 PF00221 Aromatic amino acid lyase M0D45_19685 PF07969 Amidohydrolase family M0D45_19695 PF07702 UTRA domain M0D45_19695 PF00392 Bacterial regulatory proteins, gntR family M0D45_19720 PF01794 Ferric reductase like transmembrane component M0D45_19725 PF00174 Oxidoreductase molybdopterin binding domain M0D45_19730 PF00266 Aminotransferase class-V M0D45_19735 PF01842 ACT domain M0D45_19735 PF01817 Chorismate mutase type II M0D45_19735 PF00800 Prephenate dehydratase M0D45_19740 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M0D45_19750 PF03544 Gram-negative bacterial TonB protein C-terminal M0D45_19755 PF02403 Seryl-tRNA synthetase N-terminal domain M0D45_19755 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M0D45_19760 PF02525 Flavodoxin-like fold M0D45_19765 PF03466 LysR substrate binding domain M0D45_19765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D45_19820 PF00672 HAMP domain M0D45_19820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D45_19820 PF02203 Tar ligand binding domain homologue M0D45_19825 PF01494 FAD binding domain M0D45_19835 PF00072 Response regulator receiver domain M0D45_19835 PF13188 PAS domain M0D45_19835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_19835 PF08448 PAS fold M0D45_19835 PF00512 His Kinase A (phospho-acceptor) domain M0D45_19840 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M0D45_19840 PF00072 Response regulator receiver domain M0D45_19840 PF01627 Hpt domain M0D45_19840 PF00512 His Kinase A (phospho-acceptor) domain M0D45_19840 PF00672 HAMP domain M0D45_19840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_19845 PF06745 KaiC M0D45_19850 PF00072 Response regulator receiver domain M0D45_19850 PF13426 PAS domain M0D45_19850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_19860 PF03918 Cytochrome C biogenesis protein M0D45_19865 PF08534 Redoxin M0D45_19870 PF01578 Cytochrome C assembly protein M0D45_19870 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal M0D45_19875 PF03100 CcmE M0D45_19880 PF04995 Heme exporter protein D (CcmD) M0D45_19885 PF01578 Cytochrome C assembly protein M0D45_19890 PF00082 Subtilase family M0D45_19900 PF04542 Sigma-70 region 2 M0D45_19900 PF08281 Sigma-70, region 4 M0D45_19910 PF00034 Cytochrome c M0D45_19925 PF05523 WxcM-like, C-terminal M0D45_19945 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family M0D45_19950 PF01943 Polysaccharide biosynthesis protein M0D45_19955 PF00535 Glycosyl transferase family 2 M0D45_19970 PF08241 Methyltransferase domain M0D45_19975 PF01979 Amidohydrolase family M0D45_19975 PF13382 Adenine deaminase C-terminal domain M0D45_19990 PF00534 Glycosyl transferases group 1 M0D45_19990 PF13579 Glycosyl transferase 4-like domain M0D45_20005 PF06745 KaiC M0D45_20010 PF00664 ABC transporter transmembrane region M0D45_20010 PF00005 ABC transporter M0D45_20015 PF00083 Sugar (and other) transporter M0D45_20020 PF00296 Luciferase-like monooxygenase M0D45_20035 PF01595 Cyclin M transmembrane N-terminal domain M0D45_20035 PF03471 Transporter associated domain M0D45_20035 PF00571 CBS domain M0D45_20045 PF01384 Phosphate transporter family M0D45_20050 PF02698 DUF218 domain M0D45_20060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_20060 PF01751 Toprim domain M0D45_20060 PF00204 DNA gyrase B M0D45_20060 PF00986 DNA gyrase B subunit, carboxyl terminus M0D45_20070 PF06418 CTP synthase N-terminus M0D45_20070 PF00117 Glutamine amidotransferase class-I M0D45_20075 PF00793 DAHP synthetase I family M0D45_20085 PF03952 Enolase, N-terminal domain M0D45_20085 PF00113 Enolase, C-terminal TIM barrel domain M0D45_20090 PF04977 Septum formation initiator M0D45_20095 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase M0D45_20100 PF02542 YgbB family M0D45_20105 PF01142 tRNA pseudouridine synthase D (TruD) M0D45_20110 PF01713 Smr domain M0D45_20115 PF01975 Survival protein SurE M0D45_20125 PF09335 SNARE associated Golgi protein M0D45_20130 PF01476 LysM domain M0D45_20130 PF01551 Peptidase family M23 M0D45_20135 PF04430 Protein of unknown function (DUF498/DUF598) M0D45_20140 PF01985 CRS1 / YhbY (CRM) domain M0D45_20145 PF01728 FtsJ-like methyltransferase M0D45_20150 PF00004 ATPase family associated with various cellular activities (AAA) M0D45_20150 PF17862 AAA+ lid domain M0D45_20150 PF06480 FtsH Extracellular M0D45_20150 PF01434 Peptidase family M41 M0D45_20155 PF00809 Pterin binding enzyme M0D45_20165 PF17209 Hfq protein M0D45_20170 PF16360 GTP-binding GTPase Middle Region M0D45_20170 PF13167 GTP-binding GTPase N-terminal M0D45_20170 PF01926 50S ribosome-binding GTPase M0D45_20175 PF02464 Competence-damaged protein M0D45_20180 PF03109 ABC1 family M0D45_20185 PF01726 LexA DNA binding domain M0D45_20185 PF00717 Peptidase S24-like M0D45_20190 PF00154 recA bacterial DNA recombination protein M0D45_20195 PF02631 RecX family M0D45_20200 PF02272 DHHA1 domain M0D45_20200 PF01411 tRNA synthetases class II (A) M0D45_20200 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M0D45_20205 PF02599 Global regulator protein family M0D45_20220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D45_20220 PF08447 PAS fold M0D45_20220 PF13426 PAS domain M0D45_20225 PF02678 Pirin M0D45_20225 PF17954 Quercetinase C-terminal cupin domain M0D45_20230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D45_20230 PF03466 LysR substrate binding domain M0D45_20255 PF02581 Thiamine monophosphate synthase M0D45_20255 PF08543 Phosphomethylpyrimidine kinase M0D45_20270 PF02562 PhoH-like protein M0D45_20270 PF13638 PIN domain M0D45_20275 PF00578 AhpC/TSA family M0D45_20290 PF00701 Dihydrodipicolinate synthetase family M0D45_20300 PF11953 Domain of unknown function (DUF3470) M0D45_20300 PF00037 4Fe-4S binding domain M0D45_20305 PF05035 2-keto-3-deoxy-galactonokinase M0D45_20315 PF13378 Enolase C-terminal domain-like M0D45_20315 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M0D45_20320 PF01081 KDPG and KHG aldolase M0D45_20345 PF00942 Cellulose binding domain M0D45_20345 PF03442 Carbohydrate binding domain X2 M0D45_20350 PF02929 Beta galactosidase small chain M0D45_20350 PF16353 Domain of unknown function(DUF4981) M0D45_20350 PF00703 Glycosyl hydrolases family 2 M0D45_20350 PF02836 Glycosyl hydrolases family 2, TIM barrel domain M0D45_20350 PF02837 Glycosyl hydrolases family 2, sugar binding domain M0D45_20360 PF16338 Domain of unknown function (DUF4968) M0D45_20360 PF17137 Domain of unknown function (DUF5110) M0D45_20360 PF01055 Glycosyl hydrolases family 31 M0D45_20370 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M0D45_20370 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M0D45_20380 PF00083 Sugar (and other) transporter M0D45_20400 PF01520 N-acetylmuramoyl-L-alanine amidase M0D45_20405 PF02649 Type I GTP cyclohydrolase folE2 M0D45_20415 PF01743 Poly A polymerase head domain M0D45_20415 PF12626 Polymerase A arginine-rich C-terminus M0D45_20415 PF12627 Probable RNA and SrmB- binding site of polymerase A M0D45_20420 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) M0D45_20425 PF02548 Ketopantoate hydroxymethyltransferase M0D45_20430 PF02569 Pantoate-beta-alanine ligase M0D45_20435 PF02261 Aspartate decarboxylase M0D45_20440 PF00342 Phosphoglucose isomerase M0D45_20465 PF01915 Glycosyl hydrolase family 3 C-terminal domain M0D45_20465 PF00933 Glycosyl hydrolase family 3 N terminal domain M0D45_20465 PF14310 Fibronectin type III-like domain M0D45_20470 PF00474 Sodium:solute symporter family M0D45_20475 PF00990 Diguanylate cyclase, GGDEF domain M0D45_20475 PF01590 GAF domain M0D45_20475 PF00563 EAL domain M0D45_20475 PF00360 Phytochrome region M0D45_20480 PF02013 Cellulose or protein binding domain M0D45_20480 PF00150 Cellulase (glycosyl hydrolase family 5) M0D45_20485 PF00072 Response regulator receiver domain M0D45_20495 PF04551 GcpE protein M0D45_20500 PF01569 PAP2 superfamily M0D45_20505 PF07690 Major Facilitator Superfamily M0D45_20510 PF01177 Asp/Glu/Hydantoin racemase M0D45_20515 PF00892 EamA-like transporter family M0D45_20520 PF01565 FAD binding domain M0D45_20520 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain M0D45_20525 PF01180 Dihydroorotate dehydrogenase M0D45_20540 PF00171 Aldehyde dehydrogenase family M0D45_20570 PF00665 Integrase core domain M0D45_20570 PF13333 Integrase core domain M0D45_20570 PF13276 HTH-like domain M0D45_20610 PF00580 UvrD/REP helicase N-terminal domain M0D45_20610 PF13361 UvrD-like helicase C-terminal domain M0D45_20645 PF02534 Type IV secretory system Conjugative DNA transfer M0D45_20675 PF13086 AAA domain M0D45_20675 PF13087 AAA domain M0D45_20675 PF13195 Protein of unknown function (DUF4011) M0D45_20675 PF13086 AAA domain M0D45_20675 PF13195 Protein of unknown function (DUF4011) M0D45_20675 PF13087 AAA domain M0D45_20695 PF08479 POTRA domain, ShlB-type M0D45_20695 PF17287 POTRA domain M0D45_20695 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB M0D45_20700 PF13018 Extended Signal Peptide of Type V secretion system M0D45_20700 PF05860 haemagglutination activity domain M0D45_20700 PF13332 Hemagglutinin repeat M0D45_20700 PF05594 Haemagluttinin repeat M0D45_20700 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain M0D45_20720 PF03073 TspO/MBR family M0D45_20725 PF00742 Homoserine dehydrogenase M0D45_20725 PF03447 Homoserine dehydrogenase, NAD binding domain M0D45_20725 PF01842 ACT domain M0D45_20725 PF00696 Amino acid kinase family M0D45_20725 PF13840 ACT domain M0D45_20730 PF08544 GHMP kinases C terminal M0D45_20730 PF00288 GHMP kinases N terminal domain M0D45_20740 PF00291 Pyridoxal-phosphate dependent enzyme M0D45_20740 PF14821 Threonine synthase N terminus M0D45_20750 PF00027 Cyclic nucleotide-binding domain M0D45_20750 PF13545 Crp-like helix-turn-helix domain M0D45_20755 PF03129 Anticodon binding domain M0D45_20755 PF13393 Histidyl-tRNA synthetase M0D45_20765 PF01634 ATP phosphoribosyltransferase M0D45_20765 PF08029 HisG, C-terminal domain M0D45_20770 PF00815 Histidinol dehydrogenase M0D45_20775 PF00155 Aminotransferase class I and II M0D45_20780 PF00475 Imidazoleglycerol-phosphate dehydratase M0D45_20785 PF00117 Glutamine amidotransferase class-I M0D45_20790 PF00977 Histidine biosynthesis protein M0D45_20795 PF00977 Histidine biosynthesis protein M0D45_20800 PF01502 Phosphoribosyl-AMP cyclohydrolase M0D45_20800 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase M0D45_20820 PF03079 ARD/ARD' family M0D45_20825 PF00596 Class II Aldolase and Adducin N-terminal domain M0D45_20830 PF13520 Amino acid permease M0D45_20835 PF13520 Amino acid permease M0D45_20845 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M0D45_20845 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M0D45_20850 PF02913 FAD linked oxidases, C-terminal domain M0D45_20850 PF01565 FAD binding domain M0D45_20870 PF01132 Elongation factor P (EF-P) OB domain M0D45_20870 PF08207 Elongation factor P (EF-P) KOW-like domain M0D45_20870 PF09285 Elongation factor P, C-terminal M0D45_20875 PF00106 short chain dehydrogenase M0D45_20880 PF00682 HMGL-like M0D45_20885 PF00378 Enoyl-CoA hydratase/isomerase M0D45_20895 PF02421 Ferrous iron transport protein B M0D45_20895 PF07670 Nucleoside recognition M0D45_20895 PF07664 Ferrous iron transport protein B C terminus M0D45_20915 PF00155 Aminotransferase class I and II M0D45_20920 PF03475 3-alpha domain M0D45_20920 PF03473 MOSC domain M0D45_20930 PF05173 Dihydrodipicolinate reductase, C-terminus M0D45_20930 PF01113 Dihydrodipicolinate reductase, N-terminus M0D45_20935 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain M0D45_20935 PF00117 Glutamine amidotransferase class-I M0D45_20945 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M0D45_20945 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain M0D45_20945 PF02142 MGS-like domain M0D45_20950 PF01272 Transcription elongation factor, GreA/GreB, C-term M0D45_20950 PF03449 Transcription elongation factor, N-terminal M0D45_20960 PF02272 DHHA1 domain M0D45_20960 PF01368 DHH family M0D45_20960 PF17768 RecJ OB domain M0D45_20975 PF04397 LytTr DNA-binding domain M0D45_20975 PF00072 Response regulator receiver domain M0D45_20985 PF01336 OB-fold nucleic acid binding domain M0D45_20985 PF00152 tRNA synthetases class II (D, K and N) M0D45_20990 PF00072 Response regulator receiver domain M0D45_20995 PF00512 His Kinase A (phospho-acceptor) domain M0D45_20995 PF01627 Hpt domain M0D45_20995 PF00072 Response regulator receiver domain M0D45_20995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_21000 PF00378 Enoyl-CoA hydratase/isomerase M0D45_21005 PF13193 AMP-binding enzyme C-terminal domain M0D45_21005 PF00501 AMP-binding enzyme M0D45_21015 PF00694 Aconitase C-terminal domain M0D45_21015 PF00330 Aconitase family (aconitate hydratase) M0D45_21030 PF11791 Aconitate B N-terminal domain M0D45_21030 PF06434 Aconitate hydratase 2 N-terminus M0D45_21030 PF00330 Aconitase family (aconitate hydratase) M0D45_21035 PF00561 alpha/beta hydrolase fold M0D45_21045 PF03707 Bacterial signalling protein N terminal repeat M0D45_21045 PF00990 Diguanylate cyclase, GGDEF domain M0D45_21045 PF00563 EAL domain M0D45_21050 PF00072 Response regulator receiver domain M0D45_21050 PF01339 CheB methylesterase M0D45_21055 PF03975 CheD chemotactic sensory transduction M0D45_21060 PF03705 CheR methyltransferase, all-alpha domain M0D45_21060 PF01739 CheR methyltransferase, SAM binding domain M0D45_21065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D45_21065 PF00672 HAMP domain M0D45_21065 PF02203 Tar ligand binding domain homologue M0D45_21075 PF01584 CheW-like domain M0D45_21080 PF07238 PilZ domain M0D45_21080 PF07317 Flagellar regulator YcgR M0D45_21085 PF00672 HAMP domain M0D45_21085 PF02203 Tar ligand binding domain homologue M0D45_21085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D45_21090 PF02203 Tar ligand binding domain homologue M0D45_21090 PF00672 HAMP domain M0D45_21090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D45_21095 PF02203 Tar ligand binding domain homologue M0D45_21095 PF00672 HAMP domain M0D45_21095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D45_21100 PF02203 Tar ligand binding domain homologue M0D45_21100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D45_21100 PF00672 HAMP domain M0D45_21105 PF02203 Tar ligand binding domain homologue M0D45_21105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D45_21105 PF00672 HAMP domain M0D45_21110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D45_21110 PF00672 HAMP domain M0D45_21110 PF02203 Tar ligand binding domain homologue M0D45_21115 PF00672 HAMP domain M0D45_21115 PF02203 Tar ligand binding domain homologue M0D45_21115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D45_21120 PF00672 HAMP domain M0D45_21120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D45_21125 PF02203 Tar ligand binding domain homologue M0D45_21125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D45_21125 PF00672 HAMP domain M0D45_21135 PF02203 Tar ligand binding domain homologue M0D45_21135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D45_21135 PF00672 HAMP domain M0D45_21150 PF02203 Tar ligand binding domain homologue M0D45_21150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D45_21150 PF00672 HAMP domain M0D45_21155 PF01584 CheW-like domain M0D45_21155 PF02895 Signal transducing histidine kinase, homodimeric domain M0D45_21155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_21155 PF01627 Hpt domain M0D45_21155 PF09078 CheY binding M0D45_21160 PF00072 Response regulator receiver domain M0D45_21170 PF01584 CheW-like domain M0D45_21175 PF13614 AAA domain M0D45_21180 PF00691 OmpA family M0D45_21180 PF13677 Membrane MotB of proton-channel complex MotA/MotB M0D45_21185 PF01618 MotA/TolQ/ExbB proton channel family M0D45_21190 PF13180 PDZ domain M0D45_21190 PF03572 Peptidase family S41 M0D45_21240 PF13276 HTH-like domain M0D45_21240 PF00665 Integrase core domain M0D45_21240 PF13333 Integrase core domain M0D45_21275 PF00072 Response regulator receiver domain M0D45_21275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_21275 PF02895 Signal transducing histidine kinase, homodimeric domain M0D45_21275 PF01584 CheW-like domain M0D45_21275 PF01627 Hpt domain M0D45_21280 PF04344 Chemotaxis phosphatase, CheZ M0D45_21285 PF00072 Response regulator receiver domain M0D45_21290 PF04539 Sigma-70 region 3 M0D45_21290 PF04545 Sigma-70, region 4 M0D45_21290 PF04542 Sigma-70 region 2 M0D45_21295 PF10609 NUBPL iron-transfer P-loop NTPase M0D45_21300 PF00448 SRP54-type protein, GTPase domain M0D45_21305 PF00771 FHIPEP family M0D45_21310 PF01312 FlhB HrpN YscU SpaS Family M0D45_21315 PF00990 Diguanylate cyclase, GGDEF domain M0D45_21315 PF03707 Bacterial signalling protein N terminal repeat M0D45_21315 PF00563 EAL domain M0D45_21320 PF00990 Diguanylate cyclase, GGDEF domain M0D45_21325 PF00990 Diguanylate cyclase, GGDEF domain M0D45_21330 PF01311 Bacterial export proteins, family 1 M0D45_21335 PF01313 Bacterial export proteins, family 3 M0D45_21340 PF00813 FliP family M0D45_21345 PF04347 Flagellar biosynthesis protein, FliO M0D45_21350 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term M0D45_21355 PF02154 Flagellar motor switch protein FliM M0D45_21355 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term M0D45_21375 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M0D45_21375 PF18269 T3SS EscN ATPase C-terminal domain M0D45_21385 PF14841 FliG middle domain M0D45_21385 PF01706 FliG C-terminal domain M0D45_21385 PF14842 FliG N-terminal domain M0D45_21390 PF08345 Flagellar M-ring protein C-terminal M0D45_21390 PF01514 Secretory protein of YscJ/FliF family M0D45_21395 PF02049 Flagellar hook-basal body complex protein FliE M0D45_21400 PF00534 Glycosyl transferases group 1 M0D45_21400 PF00535 Glycosyl transferase family 2 M0D45_21420 PF02348 Cytidylyltransferase M0D45_21465 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M0D45_21465 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M0D45_21475 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family M0D45_21480 PF02954 Bacterial regulatory protein, Fis family M0D45_21480 PF06490 Flagellar regulatory protein FleQ M0D45_21480 PF00158 Sigma-54 interaction domain M0D45_21485 PF01339 CheB methylesterase M0D45_21485 PF00072 Response regulator receiver domain M0D45_21490 PF04552 Sigma-54, DNA binding domain M0D45_21490 PF04963 Sigma-54 factor, core binding domain M0D45_21490 PF00309 Sigma-54 factor, Activator interacting domain (AID) M0D45_21495 PF00072 Response regulator receiver domain M0D45_21495 PF00196 Bacterial regulatory proteins, luxR family M0D45_21510 PF02561 Flagellar protein FliS M0D45_21515 PF02465 Flagellar hook-associated protein 2 N-terminus M0D45_21515 PF07196 Flagellin hook IN motif M0D45_21515 PF07195 Flagellar hook-associated protein 2 C-terminus M0D45_21520 PF00700 Bacterial flagellin C-terminal helical region M0D45_21520 PF00669 Bacterial flagellin N-terminal helical region M0D45_21525 PF00700 Bacterial flagellin C-terminal helical region M0D45_21525 PF00669 Bacterial flagellin N-terminal helical region M0D45_21530 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M0D45_21530 PF07196 Flagellin hook IN motif M0D45_21535 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase M0D45_21535 PF10135 Rod binding protein M0D45_21540 PF02119 Flagellar P-ring protein M0D45_21545 PF02107 Flagellar L-ring protein M0D45_21550 PF00460 Flagella basal body rod protein M0D45_21550 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M0D45_21555 PF00460 Flagella basal body rod protein M0D45_21555 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M0D45_21560 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M0D45_21560 PF00460 Flagella basal body rod protein M0D45_21560 PF07559 Flagellar basal body protein FlaE M0D45_21565 PF03963 Flagellar hook capping protein - N-terminal region M0D45_21570 PF00460 Flagella basal body rod protein M0D45_21570 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M0D45_21580 PF01584 CheW-like domain M0D45_21580 PF00072 Response regulator receiver domain M0D45_21600 PF13426 PAS domain M0D45_21600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_21600 PF00512 His Kinase A (phospho-acceptor) domain M0D45_21600 PF00989 PAS fold M0D45_21600 PF13188 PAS domain M0D45_21605 PF00990 Diguanylate cyclase, GGDEF domain M0D45_21605 PF03707 Bacterial signalling protein N terminal repeat M0D45_21605 PF00563 EAL domain M0D45_21610 PF07730 Histidine kinase M0D45_21610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_21615 PF03707 Bacterial signalling protein N terminal repeat M0D45_21615 PF00990 Diguanylate cyclase, GGDEF domain M0D45_21615 PF00563 EAL domain M0D45_21630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D45_21630 PF00672 HAMP domain M0D45_21630 PF12729 Four helix bundle sensory module for signal transduction M0D45_21635 PF04356 Protein of unknown function (DUF489) M0D45_21645 PF00293 NUDIX domain M0D45_21655 PF02617 ATP-dependent Clp protease adaptor protein ClpS M0D45_21660 PF17871 AAA lid domain M0D45_21660 PF10431 C-terminal, D2-small domain, of ClpB protein M0D45_21660 PF02861 Clp amino terminal domain, pathogenicity island component M0D45_21660 PF00004 ATPase family associated with various cellular activities (AAA) M0D45_21660 PF07724 AAA domain (Cdc48 subfamily) M0D45_21665 PF01176 Translation initiation factor 1A / IF-1 M0D45_21670 PF03588 Leucyl/phenylalanyl-tRNA protein transferase M0D45_21680 PF07992 Pyridine nucleotide-disulphide oxidoreductase M0D45_21685 PF17854 FtsK alpha domain M0D45_21685 PF01580 FtsK/SpoIIIE family M0D45_21685 PF13491 4TM region of DNA translocase FtsK/SpoIIIE M0D45_21685 PF09397 Ftsk gamma domain M0D45_21695 PF03548 Outer membrane lipoprotein carrier protein LolA M0D45_21705 PF00004 ATPase family associated with various cellular activities (AAA) M0D45_21705 PF16193 AAA C-terminal domain M0D45_21705 PF12002 MgsA AAA+ ATPase C terminal M0D45_21710 PF02537 CrcB-like protein, Camphor Resistance (CrcB) M0D45_21715 PF02803 Thiolase, C-terminal domain M0D45_21715 PF00108 Thiolase, N-terminal domain M0D45_21720 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M0D45_21720 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M0D45_21720 PF00378 Enoyl-CoA hydratase/isomerase M0D45_21730 PF00334 Nucleoside diphosphate kinase M0D45_21735 PF04055 Radical SAM superfamily M0D45_21745 PF13464 Domain of unknown function (DUF4115) M0D45_21760 PF01926 50S ribosome-binding GTPase M0D45_21760 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal M0D45_21765 PF03454 MoeA C-terminal region (domain IV) M0D45_21765 PF00994 Probable molybdopterin binding domain M0D45_21765 PF03453 MoeA N-terminal region (domain I and II) M0D45_21770 PF00899 ThiF family M0D45_21780 PF03372 Endonuclease/Exonuclease/phosphatase family M0D45_21790 PF00994 Probable molybdopterin binding domain M0D45_21790 PF03454 MoeA C-terminal region (domain IV) M0D45_21790 PF03453 MoeA N-terminal region (domain I and II) M0D45_21795 PF12804 MobA-like NTP transferase domain M0D45_21805 PF10414 Sirohaem synthase dimerisation region M0D45_21805 PF14824 Sirohaem biosynthesis protein central M0D45_21805 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M0D45_21810 PF03861 ANTAR domain M0D45_21810 PF00072 Response regulator receiver domain M0D45_21820 PF07690 Major Facilitator Superfamily M0D45_21825 PF18267 Rubredoxin NAD+ reductase C-terminal domain M0D45_21825 PF04324 BFD-like [2Fe-2S] binding domain M0D45_21825 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M0D45_21825 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M0D45_21825 PF07992 Pyridine nucleotide-disulphide oxidoreductase M0D45_21835 PF04324 BFD-like [2Fe-2S] binding domain M0D45_21835 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M0D45_21835 PF00384 Molybdopterin oxidoreductase M0D45_21835 PF01568 Molydopterin dinucleotide binding domain M0D45_21840 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M0D45_21870 PF00563 EAL domain M0D45_21870 PF08447 PAS fold M0D45_21870 PF08448 PAS fold M0D45_21870 PF00990 Diguanylate cyclase, GGDEF domain M0D45_21875 PF12951 Passenger-associated-transport-repeat M0D45_21880 PF00072 Response regulator receiver domain M0D45_21880 PF00196 Bacterial regulatory proteins, luxR family M0D45_21885 PF00072 Response regulator receiver domain M0D45_21885 PF08448 PAS fold M0D45_21885 PF00512 His Kinase A (phospho-acceptor) domain M0D45_21885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_21885 PF13426 PAS domain M0D45_21895 PF00873 AcrB/AcrD/AcrF family M0D45_21900 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M0D45_21905 PF00082 Subtilase family M0D45_21905 PF03797 Autotransporter beta-domain M0D45_21910 PF07694 5TMR of 5TMR-LYT M0D45_21910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D45_21910 PF06580 Histidine kinase M0D45_21910 PF13492 GAF domain M0D45_21915 PF04397 LytTr DNA-binding domain M0D45_21915 PF00072 Response regulator receiver domain M0D45_21920 PF00144 Beta-lactamase M0D45_21930 PF07995 Glucose / Sorbosone dehydrogenase M0D45_21935 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M0D45_21945 PF09335 SNARE associated Golgi protein M0D45_21950 PF01494 FAD binding domain M0D45_21960 PF02585 GlcNAc-PI de-N-acetylase M0D45_21960 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase M0D45_21980 PF00202 Aminotransferase class-III M0D45_21990 PF00155 Aminotransferase class I and II M0D45_22005 PF00668 Condensation domain M0D45_22005 PF13193 AMP-binding enzyme C-terminal domain M0D45_22005 PF00501 AMP-binding enzyme M0D45_22005 PF00550 Phosphopantetheine attachment site M0D45_22010 PF00975 Thioesterase domain M0D45_22010 PF00550 Phosphopantetheine attachment site M0D45_22010 PF00668 Condensation domain M0D45_22010 PF13193 AMP-binding enzyme C-terminal domain M0D45_22010 PF00501 AMP-binding enzyme M0D45_22015 PF00975 Thioesterase domain M0D45_22015 PF00550 Phosphopantetheine attachment site M0D45_22015 PF00668 Condensation domain M0D45_22015 PF13193 AMP-binding enzyme C-terminal domain M0D45_22015 PF00501 AMP-binding enzyme M0D45_22020 PF13193 AMP-binding enzyme C-terminal domain M0D45_22020 PF00975 Thioesterase domain M0D45_22020 PF00501 AMP-binding enzyme M0D45_22020 PF00668 Condensation domain M0D45_22020 PF00550 Phosphopantetheine attachment site