locus-tag class description M0D44_00010 PF00501 AMP-binding enzyme M0D44_00010 PF13193 AMP-binding enzyme C-terminal domain M0D44_00010 PF00668 Condensation domain M0D44_00010 PF00550 Phosphopantetheine attachment site M0D44_00025 PF00155 Aminotransferase class I and II M0D44_00030 PF01070 FMN-dependent dehydrogenase M0D44_00035 PF00202 Aminotransferase class-III M0D44_00055 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase M0D44_00055 PF02585 GlcNAc-PI de-N-acetylase M0D44_00070 PF01494 FAD binding domain M0D44_00075 PF09335 SNARE associated Golgi protein M0D44_00085 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M0D44_00090 PF07995 Glucose / Sorbosone dehydrogenase M0D44_00100 PF00144 Beta-lactamase M0D44_00105 PF04397 LytTr DNA-binding domain M0D44_00105 PF00072 Response regulator receiver domain M0D44_00110 PF07694 5TMR of 5TMR-LYT M0D44_00110 PF13492 GAF domain M0D44_00110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_00110 PF06580 Histidine kinase M0D44_00115 PF03797 Autotransporter beta-domain M0D44_00115 PF00082 Subtilase family M0D44_00120 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M0D44_00125 PF00873 AcrB/AcrD/AcrF family M0D44_00135 PF13426 PAS domain M0D44_00135 PF08448 PAS fold M0D44_00135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_00135 PF00072 Response regulator receiver domain M0D44_00135 PF00512 His Kinase A (phospho-acceptor) domain M0D44_00140 PF00196 Bacterial regulatory proteins, luxR family M0D44_00140 PF00072 Response regulator receiver domain M0D44_00145 PF12951 Passenger-associated-transport-repeat M0D44_00150 PF08448 PAS fold M0D44_00150 PF00563 EAL domain M0D44_00150 PF00990 Diguanylate cyclase, GGDEF domain M0D44_00150 PF08447 PAS fold M0D44_00175 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M0D44_00180 PF01568 Molydopterin dinucleotide binding domain M0D44_00180 PF00384 Molybdopterin oxidoreductase M0D44_00180 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M0D44_00180 PF04324 BFD-like [2Fe-2S] binding domain M0D44_00190 PF04324 BFD-like [2Fe-2S] binding domain M0D44_00190 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M0D44_00190 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M0D44_00190 PF07992 Pyridine nucleotide-disulphide oxidoreductase M0D44_00190 PF18267 Rubredoxin NAD+ reductase C-terminal domain M0D44_00195 PF07690 Major Facilitator Superfamily M0D44_00205 PF03861 ANTAR domain M0D44_00205 PF00072 Response regulator receiver domain M0D44_00210 PF10414 Sirohaem synthase dimerisation region M0D44_00210 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M0D44_00210 PF14824 Sirohaem biosynthesis protein central M0D44_00220 PF12804 MobA-like NTP transferase domain M0D44_00225 PF00994 Probable molybdopterin binding domain M0D44_00225 PF03454 MoeA C-terminal region (domain IV) M0D44_00225 PF03453 MoeA N-terminal region (domain I and II) M0D44_00235 PF03372 Endonuclease/Exonuclease/phosphatase family M0D44_00245 PF00899 ThiF family M0D44_00250 PF03453 MoeA N-terminal region (domain I and II) M0D44_00250 PF03454 MoeA C-terminal region (domain IV) M0D44_00250 PF00994 Probable molybdopterin binding domain M0D44_00255 PF01926 50S ribosome-binding GTPase M0D44_00255 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal M0D44_00270 PF13464 Domain of unknown function (DUF4115) M0D44_00280 PF04055 Radical SAM superfamily M0D44_00285 PF00334 Nucleoside diphosphate kinase M0D44_00295 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M0D44_00295 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M0D44_00295 PF00378 Enoyl-CoA hydratase/isomerase M0D44_00300 PF00108 Thiolase, N-terminal domain M0D44_00300 PF02803 Thiolase, C-terminal domain M0D44_00305 PF02537 CrcB-like protein, Camphor Resistance (CrcB) M0D44_00310 PF12002 MgsA AAA+ ATPase C terminal M0D44_00310 PF16193 AAA C-terminal domain M0D44_00310 PF00004 ATPase family associated with various cellular activities (AAA) M0D44_00320 PF03548 Outer membrane lipoprotein carrier protein LolA M0D44_00330 PF09397 Ftsk gamma domain M0D44_00330 PF01580 FtsK/SpoIIIE family M0D44_00330 PF17854 FtsK alpha domain M0D44_00330 PF13491 4TM region of DNA translocase FtsK/SpoIIIE M0D44_00335 PF07992 Pyridine nucleotide-disulphide oxidoreductase M0D44_00345 PF03588 Leucyl/phenylalanyl-tRNA protein transferase M0D44_00350 PF01176 Translation initiation factor 1A / IF-1 M0D44_00355 PF00004 ATPase family associated with various cellular activities (AAA) M0D44_00355 PF07724 AAA domain (Cdc48 subfamily) M0D44_00355 PF17871 AAA lid domain M0D44_00355 PF02861 Clp amino terminal domain, pathogenicity island component M0D44_00355 PF10431 C-terminal, D2-small domain, of ClpB protein M0D44_00360 PF02617 ATP-dependent Clp protease adaptor protein ClpS M0D44_00370 PF00293 NUDIX domain M0D44_00380 PF04356 Protein of unknown function (DUF489) M0D44_00385 PF12729 Four helix bundle sensory module for signal transduction M0D44_00385 PF00672 HAMP domain M0D44_00385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D44_00400 PF00563 EAL domain M0D44_00400 PF00990 Diguanylate cyclase, GGDEF domain M0D44_00400 PF03707 Bacterial signalling protein N terminal repeat M0D44_00405 PF07730 Histidine kinase M0D44_00405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_00410 PF00563 EAL domain M0D44_00410 PF00990 Diguanylate cyclase, GGDEF domain M0D44_00410 PF03707 Bacterial signalling protein N terminal repeat M0D44_00415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_00415 PF00512 His Kinase A (phospho-acceptor) domain M0D44_00415 PF13188 PAS domain M0D44_00415 PF13426 PAS domain M0D44_00415 PF00989 PAS fold M0D44_00435 PF01584 CheW-like domain M0D44_00435 PF00072 Response regulator receiver domain M0D44_00445 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M0D44_00445 PF00460 Flagella basal body rod protein M0D44_00450 PF03963 Flagellar hook capping protein - N-terminal region M0D44_00455 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M0D44_00455 PF00460 Flagella basal body rod protein M0D44_00455 PF07559 Flagellar basal body protein FlaE M0D44_00460 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M0D44_00460 PF00460 Flagella basal body rod protein M0D44_00465 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M0D44_00465 PF00460 Flagella basal body rod protein M0D44_00470 PF02107 Flagellar L-ring protein M0D44_00475 PF02119 Flagellar P-ring protein M0D44_00480 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase M0D44_00480 PF10135 Rod binding protein M0D44_00485 PF07196 Flagellin hook IN motif M0D44_00485 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M0D44_00490 PF00700 Bacterial flagellin C-terminal helical region M0D44_00490 PF00669 Bacterial flagellin N-terminal helical region M0D44_00495 PF00669 Bacterial flagellin N-terminal helical region M0D44_00495 PF00700 Bacterial flagellin C-terminal helical region M0D44_00500 PF07196 Flagellin hook IN motif M0D44_00500 PF02465 Flagellar hook-associated protein 2 N-terminus M0D44_00500 PF07195 Flagellar hook-associated protein 2 C-terminus M0D44_00505 PF02561 Flagellar protein FliS M0D44_00520 PF00072 Response regulator receiver domain M0D44_00520 PF00196 Bacterial regulatory proteins, luxR family M0D44_00525 PF04552 Sigma-54, DNA binding domain M0D44_00525 PF04963 Sigma-54 factor, core binding domain M0D44_00525 PF00309 Sigma-54 factor, Activator interacting domain (AID) M0D44_00530 PF00072 Response regulator receiver domain M0D44_00530 PF01339 CheB methylesterase M0D44_00535 PF06490 Flagellar regulatory protein FleQ M0D44_00535 PF00158 Sigma-54 interaction domain M0D44_00535 PF02954 Bacterial regulatory protein, Fis family M0D44_00540 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family M0D44_00550 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M0D44_00550 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M0D44_00595 PF02348 Cytidylyltransferase M0D44_00615 PF00534 Glycosyl transferases group 1 M0D44_00615 PF00535 Glycosyl transferase family 2 M0D44_00620 PF02049 Flagellar hook-basal body complex protein FliE M0D44_00625 PF01514 Secretory protein of YscJ/FliF family M0D44_00625 PF08345 Flagellar M-ring protein C-terminal M0D44_00630 PF14842 FliG N-terminal domain M0D44_00630 PF01706 FliG C-terminal domain M0D44_00630 PF14841 FliG middle domain M0D44_00640 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M0D44_00640 PF18269 T3SS EscN ATPase C-terminal domain M0D44_00660 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term M0D44_00660 PF02154 Flagellar motor switch protein FliM M0D44_00665 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term M0D44_00670 PF04347 Flagellar biosynthesis protein, FliO M0D44_00675 PF00813 FliP family M0D44_00680 PF01313 Bacterial export proteins, family 3 M0D44_00685 PF01311 Bacterial export proteins, family 1 M0D44_00690 PF00990 Diguanylate cyclase, GGDEF domain M0D44_00695 PF00990 Diguanylate cyclase, GGDEF domain M0D44_00700 PF03707 Bacterial signalling protein N terminal repeat M0D44_00700 PF00563 EAL domain M0D44_00700 PF00990 Diguanylate cyclase, GGDEF domain M0D44_00705 PF01312 FlhB HrpN YscU SpaS Family M0D44_00710 PF00771 FHIPEP family M0D44_00715 PF00448 SRP54-type protein, GTPase domain M0D44_00720 PF10609 NUBPL iron-transfer P-loop NTPase M0D44_00725 PF04539 Sigma-70 region 3 M0D44_00725 PF04542 Sigma-70 region 2 M0D44_00725 PF04545 Sigma-70, region 4 M0D44_00730 PF00072 Response regulator receiver domain M0D44_00735 PF04344 Chemotaxis phosphatase, CheZ M0D44_00740 PF01584 CheW-like domain M0D44_00740 PF02895 Signal transducing histidine kinase, homodimeric domain M0D44_00740 PF01627 Hpt domain M0D44_00740 PF00072 Response regulator receiver domain M0D44_00740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_00825 PF13180 PDZ domain M0D44_00825 PF03572 Peptidase family S41 M0D44_00830 PF01618 MotA/TolQ/ExbB proton channel family M0D44_00835 PF00691 OmpA family M0D44_00835 PF13677 Membrane MotB of proton-channel complex MotA/MotB M0D44_00840 PF13614 AAA domain M0D44_00845 PF01584 CheW-like domain M0D44_00855 PF00072 Response regulator receiver domain M0D44_00860 PF02895 Signal transducing histidine kinase, homodimeric domain M0D44_00860 PF01584 CheW-like domain M0D44_00860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_00860 PF01627 Hpt domain M0D44_00860 PF09078 CheY binding M0D44_00865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D44_00875 PF00672 HAMP domain M0D44_00875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D44_00875 PF02203 Tar ligand binding domain homologue M0D44_00880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D44_00880 PF02203 Tar ligand binding domain homologue M0D44_00880 PF00672 HAMP domain M0D44_00890 PF02203 Tar ligand binding domain homologue M0D44_00890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D44_00890 PF00672 HAMP domain M0D44_00895 PF02203 Tar ligand binding domain homologue M0D44_00895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D44_00895 PF00672 HAMP domain M0D44_00900 PF02203 Tar ligand binding domain homologue M0D44_00900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D44_00900 PF00672 HAMP domain M0D44_00905 PF00672 HAMP domain M0D44_00905 PF02203 Tar ligand binding domain homologue M0D44_00905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D44_00910 PF00672 HAMP domain M0D44_00910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D44_00910 PF02203 Tar ligand binding domain homologue M0D44_00915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D44_00915 PF00672 HAMP domain M0D44_00915 PF02203 Tar ligand binding domain homologue M0D44_00920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D44_00920 PF00672 HAMP domain M0D44_00920 PF02203 Tar ligand binding domain homologue M0D44_00925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D44_00925 PF00672 HAMP domain M0D44_00925 PF02203 Tar ligand binding domain homologue M0D44_00930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D44_00930 PF02203 Tar ligand binding domain homologue M0D44_00930 PF00672 HAMP domain M0D44_00935 PF07238 PilZ domain M0D44_00935 PF07317 Flagellar regulator YcgR M0D44_00940 PF01584 CheW-like domain M0D44_00950 PF00672 HAMP domain M0D44_00950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D44_00950 PF02203 Tar ligand binding domain homologue M0D44_00955 PF01739 CheR methyltransferase, SAM binding domain M0D44_00955 PF03705 CheR methyltransferase, all-alpha domain M0D44_00960 PF03975 CheD chemotactic sensory transduction M0D44_00965 PF01339 CheB methylesterase M0D44_00965 PF00072 Response regulator receiver domain M0D44_00970 PF03707 Bacterial signalling protein N terminal repeat M0D44_00970 PF00990 Diguanylate cyclase, GGDEF domain M0D44_00970 PF00563 EAL domain M0D44_00980 PF00561 alpha/beta hydrolase fold M0D44_00985 PF06434 Aconitate hydratase 2 N-terminus M0D44_00985 PF00330 Aconitase family (aconitate hydratase) M0D44_00985 PF11791 Aconitate B N-terminal domain M0D44_01000 PF00694 Aconitase C-terminal domain M0D44_01000 PF00330 Aconitase family (aconitate hydratase) M0D44_01010 PF13193 AMP-binding enzyme C-terminal domain M0D44_01010 PF00501 AMP-binding enzyme M0D44_01015 PF00378 Enoyl-CoA hydratase/isomerase M0D44_01020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_01020 PF00512 His Kinase A (phospho-acceptor) domain M0D44_01020 PF01627 Hpt domain M0D44_01020 PF00072 Response regulator receiver domain M0D44_01025 PF00072 Response regulator receiver domain M0D44_01030 PF00152 tRNA synthetases class II (D, K and N) M0D44_01030 PF01336 OB-fold nucleic acid binding domain M0D44_01040 PF00072 Response regulator receiver domain M0D44_01040 PF04397 LytTr DNA-binding domain M0D44_01055 PF17768 RecJ OB domain M0D44_01055 PF02272 DHHA1 domain M0D44_01055 PF01368 DHH family M0D44_01065 PF01272 Transcription elongation factor, GreA/GreB, C-term M0D44_01065 PF03449 Transcription elongation factor, N-terminal M0D44_01070 PF02142 MGS-like domain M0D44_01070 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain M0D44_01070 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M0D44_01080 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain M0D44_01080 PF00117 Glutamine amidotransferase class-I M0D44_01085 PF05173 Dihydrodipicolinate reductase, C-terminus M0D44_01085 PF01113 Dihydrodipicolinate reductase, N-terminus M0D44_01095 PF03475 3-alpha domain M0D44_01095 PF03473 MOSC domain M0D44_01100 PF00155 Aminotransferase class I and II M0D44_01120 PF02421 Ferrous iron transport protein B M0D44_01120 PF07670 Nucleoside recognition M0D44_01120 PF07664 Ferrous iron transport protein B C terminus M0D44_01130 PF00378 Enoyl-CoA hydratase/isomerase M0D44_01135 PF00682 HMGL-like M0D44_01140 PF00106 short chain dehydrogenase M0D44_01145 PF01132 Elongation factor P (EF-P) OB domain M0D44_01145 PF08207 Elongation factor P (EF-P) KOW-like domain M0D44_01145 PF09285 Elongation factor P, C-terminal M0D44_01165 PF01565 FAD binding domain M0D44_01165 PF02913 FAD linked oxidases, C-terminal domain M0D44_01170 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M0D44_01170 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M0D44_01180 PF13520 Amino acid permease M0D44_01185 PF13520 Amino acid permease M0D44_01190 PF00596 Class II Aldolase and Adducin N-terminal domain M0D44_01195 PF03079 ARD/ARD' family M0D44_01215 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase M0D44_01215 PF01502 Phosphoribosyl-AMP cyclohydrolase M0D44_01220 PF00977 Histidine biosynthesis protein M0D44_01225 PF00977 Histidine biosynthesis protein M0D44_01230 PF00117 Glutamine amidotransferase class-I M0D44_01235 PF00475 Imidazoleglycerol-phosphate dehydratase M0D44_01240 PF00155 Aminotransferase class I and II M0D44_01245 PF00815 Histidinol dehydrogenase M0D44_01250 PF08029 HisG, C-terminal domain M0D44_01250 PF01634 ATP phosphoribosyltransferase M0D44_01260 PF13393 Histidyl-tRNA synthetase M0D44_01260 PF03129 Anticodon binding domain M0D44_01270 PF13545 Crp-like helix-turn-helix domain M0D44_01270 PF00027 Cyclic nucleotide-binding domain M0D44_01280 PF14821 Threonine synthase N terminus M0D44_01280 PF00291 Pyridoxal-phosphate dependent enzyme M0D44_01290 PF08544 GHMP kinases C terminal M0D44_01290 PF00288 GHMP kinases N terminal domain M0D44_01295 PF00696 Amino acid kinase family M0D44_01295 PF13840 ACT domain M0D44_01295 PF00742 Homoserine dehydrogenase M0D44_01295 PF03447 Homoserine dehydrogenase, NAD binding domain M0D44_01295 PF01842 ACT domain M0D44_01300 PF03073 TspO/MBR family M0D44_01310 PF13332 Hemagglutinin repeat M0D44_01310 PF05860 haemagglutination activity domain M0D44_01310 PF04829 Pre-toxin domain with VENN motif M0D44_01330 PF05594 Haemagluttinin repeat M0D44_01330 PF13332 Hemagglutinin repeat M0D44_01330 PF05860 haemagglutination activity domain M0D44_01330 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain M0D44_01330 PF13018 Extended Signal Peptide of Type V secretion system M0D44_01335 PF08479 POTRA domain, ShlB-type M0D44_01335 PF17287 POTRA domain M0D44_01335 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB M0D44_01355 PF13195 Protein of unknown function (DUF4011) M0D44_01355 PF13087 AAA domain M0D44_01355 PF13195 Protein of unknown function (DUF4011) M0D44_01355 PF13086 AAA domain M0D44_01355 PF13086 AAA domain M0D44_01355 PF13087 AAA domain M0D44_01375 PF02794 RTX toxin acyltransferase family M0D44_01380 PF07690 Major Facilitator Superfamily M0D44_01415 PF00664 ABC transporter transmembrane region M0D44_01415 PF03412 Peptidase C39 family M0D44_01415 PF00005 ABC transporter M0D44_01435 PF02534 Type IV secretory system Conjugative DNA transfer M0D44_01515 PF04002 RadC-like JAB domain M0D44_01545 PF00899 ThiF family M0D44_01545 PF14461 Prokaryotic E2 family B M0D44_01555 PF01734 Patatin-like phospholipase M0D44_01585 PF00171 Aldehyde dehydrogenase family M0D44_01600 PF01180 Dihydroorotate dehydrogenase M0D44_01605 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain M0D44_01605 PF01565 FAD binding domain M0D44_01610 PF00892 EamA-like transporter family M0D44_01615 PF01177 Asp/Glu/Hydantoin racemase M0D44_01620 PF07690 Major Facilitator Superfamily M0D44_01625 PF01569 PAP2 superfamily M0D44_01630 PF04551 GcpE protein M0D44_01640 PF00072 Response regulator receiver domain M0D44_01645 PF00150 Cellulase (glycosyl hydrolase family 5) M0D44_01645 PF02013 Cellulose or protein binding domain M0D44_01650 PF00360 Phytochrome region M0D44_01650 PF00990 Diguanylate cyclase, GGDEF domain M0D44_01650 PF00563 EAL domain M0D44_01650 PF01590 GAF domain M0D44_01655 PF00474 Sodium:solute symporter family M0D44_01660 PF14310 Fibronectin type III-like domain M0D44_01660 PF00933 Glycosyl hydrolase family 3 N terminal domain M0D44_01660 PF01915 Glycosyl hydrolase family 3 C-terminal domain M0D44_01685 PF00342 Phosphoglucose isomerase M0D44_01690 PF02261 Aspartate decarboxylase M0D44_01695 PF02569 Pantoate-beta-alanine ligase M0D44_01700 PF02548 Ketopantoate hydroxymethyltransferase M0D44_01705 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) M0D44_01710 PF12627 Probable RNA and SrmB- binding site of polymerase A M0D44_01710 PF01743 Poly A polymerase head domain M0D44_01710 PF12626 Polymerase A arginine-rich C-terminus M0D44_01720 PF02649 Type I GTP cyclohydrolase folE2 M0D44_01725 PF01520 N-acetylmuramoyl-L-alanine amidase M0D44_01745 PF00083 Sugar (and other) transporter M0D44_01755 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M0D44_01755 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M0D44_01765 PF17137 Domain of unknown function (DUF5110) M0D44_01765 PF01055 Glycosyl hydrolases family 31 M0D44_01765 PF16338 Domain of unknown function (DUF4968) M0D44_01775 PF02929 Beta galactosidase small chain M0D44_01775 PF00703 Glycosyl hydrolases family 2 M0D44_01775 PF02836 Glycosyl hydrolases family 2, TIM barrel domain M0D44_01775 PF02837 Glycosyl hydrolases family 2, sugar binding domain M0D44_01775 PF16353 Domain of unknown function(DUF4981) M0D44_01780 PF00942 Cellulose binding domain M0D44_01780 PF03442 Carbohydrate binding domain X2 M0D44_01805 PF03466 LysR substrate binding domain M0D44_01805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D44_01810 PF01081 KDPG and KHG aldolase M0D44_01815 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M0D44_01815 PF13378 Enolase C-terminal domain-like M0D44_01820 PF08450 SMP-30/Gluconolactonase/LRE-like region M0D44_01825 PF05035 2-keto-3-deoxy-galactonokinase M0D44_01830 PF11953 Domain of unknown function (DUF3470) M0D44_01830 PF00037 4Fe-4S binding domain M0D44_01840 PF00701 Dihydrodipicolinate synthetase family M0D44_01855 PF00578 AhpC/TSA family M0D44_01860 PF02562 PhoH-like protein M0D44_01860 PF13638 PIN domain M0D44_01875 PF02581 Thiamine monophosphate synthase M0D44_01875 PF08543 Phosphomethylpyrimidine kinase M0D44_01900 PF03466 LysR substrate binding domain M0D44_01900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D44_01905 PF17954 Quercetinase C-terminal cupin domain M0D44_01905 PF02678 Pirin M0D44_01910 PF13426 PAS domain M0D44_01910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D44_01910 PF08447 PAS fold M0D44_01920 PF02599 Global regulator protein family M0D44_01925 PF02272 DHHA1 domain M0D44_01925 PF01411 tRNA synthetases class II (A) M0D44_01925 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M0D44_01930 PF02631 RecX family M0D44_01935 PF00154 recA bacterial DNA recombination protein M0D44_01940 PF00717 Peptidase S24-like M0D44_01940 PF01726 LexA DNA binding domain M0D44_01945 PF03109 ABC1 family M0D44_01950 PF02464 Competence-damaged protein M0D44_01955 PF13167 GTP-binding GTPase N-terminal M0D44_01955 PF16360 GTP-binding GTPase Middle Region M0D44_01955 PF01926 50S ribosome-binding GTPase M0D44_01960 PF17209 Hfq protein M0D44_01970 PF00809 Pterin binding enzyme M0D44_01975 PF06480 FtsH Extracellular M0D44_01975 PF01434 Peptidase family M41 M0D44_01975 PF17862 AAA+ lid domain M0D44_01975 PF00004 ATPase family associated with various cellular activities (AAA) M0D44_01980 PF01728 FtsJ-like methyltransferase M0D44_01985 PF01985 CRS1 / YhbY (CRM) domain M0D44_01990 PF04430 Protein of unknown function (DUF498/DUF598) M0D44_01995 PF01476 LysM domain M0D44_01995 PF01551 Peptidase family M23 M0D44_02000 PF09335 SNARE associated Golgi protein M0D44_02010 PF01975 Survival protein SurE M0D44_02015 PF01713 Smr domain M0D44_02020 PF01142 tRNA pseudouridine synthase D (TruD) M0D44_02025 PF02542 YgbB family M0D44_02030 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase M0D44_02035 PF04977 Septum formation initiator M0D44_02040 PF03952 Enolase, N-terminal domain M0D44_02040 PF00113 Enolase, C-terminal TIM barrel domain M0D44_02050 PF00793 DAHP synthetase I family M0D44_02055 PF00117 Glutamine amidotransferase class-I M0D44_02055 PF06418 CTP synthase N-terminus M0D44_02065 PF01751 Toprim domain M0D44_02065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_02065 PF00986 DNA gyrase B subunit, carboxyl terminus M0D44_02065 PF00204 DNA gyrase B M0D44_02075 PF02698 DUF218 domain M0D44_02080 PF01384 Phosphate transporter family M0D44_02090 PF00571 CBS domain M0D44_02090 PF01595 Cyclin M transmembrane N-terminal domain M0D44_02090 PF03471 Transporter associated domain M0D44_02105 PF00296 Luciferase-like monooxygenase M0D44_02110 PF07690 Major Facilitator Superfamily M0D44_02115 PF00005 ABC transporter M0D44_02115 PF00664 ABC transporter transmembrane region M0D44_02120 PF06745 KaiC M0D44_02135 PF13579 Glycosyl transferase 4-like domain M0D44_02135 PF00534 Glycosyl transferases group 1 M0D44_02150 PF13382 Adenine deaminase C-terminal domain M0D44_02150 PF01979 Amidohydrolase family M0D44_02155 PF08241 Methyltransferase domain M0D44_02170 PF00535 Glycosyl transferase family 2 M0D44_02175 PF01943 Polysaccharide biosynthesis protein M0D44_02180 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family M0D44_02200 PF05523 WxcM-like, C-terminal M0D44_02215 PF00034 Cytochrome c M0D44_02225 PF04542 Sigma-70 region 2 M0D44_02225 PF08281 Sigma-70, region 4 M0D44_02235 PF00082 Subtilase family M0D44_02240 PF01578 Cytochrome C assembly protein M0D44_02245 PF04995 Heme exporter protein D (CcmD) M0D44_02250 PF03100 CcmE M0D44_02255 PF01578 Cytochrome C assembly protein M0D44_02255 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal M0D44_02260 PF08534 Redoxin M0D44_02265 PF03918 Cytochrome C biogenesis protein M0D44_02275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_02275 PF13426 PAS domain M0D44_02275 PF00072 Response regulator receiver domain M0D44_02280 PF06745 KaiC M0D44_02285 PF00672 HAMP domain M0D44_02285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_02285 PF00512 His Kinase A (phospho-acceptor) domain M0D44_02285 PF01627 Hpt domain M0D44_02285 PF00072 Response regulator receiver domain M0D44_02285 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M0D44_02290 PF00512 His Kinase A (phospho-acceptor) domain M0D44_02290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_02290 PF00072 Response regulator receiver domain M0D44_02290 PF13188 PAS domain M0D44_02290 PF08448 PAS fold M0D44_02300 PF01494 FAD binding domain M0D44_02305 PF00672 HAMP domain M0D44_02305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D44_02305 PF02203 Tar ligand binding domain homologue M0D44_02395 PF04002 RadC-like JAB domain M0D44_02480 PF03466 LysR substrate binding domain M0D44_02480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D44_02485 PF02525 Flavodoxin-like fold M0D44_02490 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M0D44_02490 PF02403 Seryl-tRNA synthetase N-terminal domain M0D44_02495 PF03544 Gram-negative bacterial TonB protein C-terminal M0D44_02505 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M0D44_02510 PF01842 ACT domain M0D44_02510 PF00800 Prephenate dehydratase M0D44_02510 PF01817 Chorismate mutase type II M0D44_02515 PF00266 Aminotransferase class-V M0D44_02520 PF00174 Oxidoreductase molybdopterin binding domain M0D44_02525 PF01794 Ferric reductase like transmembrane component M0D44_02550 PF00392 Bacterial regulatory proteins, gntR family M0D44_02550 PF07702 UTRA domain M0D44_02560 PF07969 Amidohydrolase family M0D44_02565 PF00221 Aromatic amino acid lyase M0D44_02575 PF01175 Urocanase Rossmann-like domain M0D44_02575 PF17392 Urocanase C-terminal domain M0D44_02575 PF17391 Urocanase N-terminal domain M0D44_02590 PF13360 PQQ-like domain M0D44_02600 PF00521 DNA gyrase/topoisomerase IV, subunit A M0D44_02600 PF03989 DNA gyrase C-terminal domain, beta-propeller M0D44_02605 PF01008 Initiation factor 2 subunit family M0D44_02620 PF00152 tRNA synthetases class II (D, K and N) M0D44_02625 PF00533 BRCA1 C Terminus (BRCT) domain M0D44_02625 PF01653 NAD-dependent DNA ligase adenylation domain M0D44_02625 PF03120 NAD-dependent DNA ligase OB-fold domain M0D44_02625 PF03119 NAD-dependent DNA ligase C4 zinc finger domain M0D44_02625 PF12826 Helix-hairpin-helix motif M0D44_02630 PF00155 Aminotransferase class I and II M0D44_02640 PF04354 ZipA, C-terminal FtsZ-binding domain M0D44_02645 PF02463 RecF/RecN/SMC N terminal domain M0D44_02650 PF01281 Ribosomal protein L9, N-terminal domain M0D44_02650 PF03948 Ribosomal protein L9, C-terminal domain M0D44_02655 PF01084 Ribosomal protein S18 M0D44_02660 PF01250 Ribosomal protein S6 M0D44_02665 PF01521 Iron-sulphur cluster biosynthesis M0D44_02670 PF00152 tRNA synthetases class II (D, K and N) M0D44_02670 PF01336 OB-fold nucleic acid binding domain M0D44_02695 PF00484 Carbonic anhydrase M0D44_02700 PF06052 3-hydroxyanthranilic acid dioxygenase M0D44_02710 PF00266 Aminotransferase class-V M0D44_02715 PF01494 FAD binding domain M0D44_02720 PF00929 Exonuclease M0D44_02720 PF08411 Exonuclease C-terminal M0D44_02730 PF00248 Aldo/keto reductase family M0D44_02745 PF01513 ATP-NAD kinase M0D44_02750 PF10672 S-adenosylmethionine-dependent methyltransferase M0D44_02750 PF02926 THUMP domain M0D44_02750 PF01170 Putative RNA methylase family UPF0020 M0D44_02785 PF00581 Rhodanese-like domain M0D44_02790 PF00293 NUDIX domain M0D44_02795 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M0D44_02795 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M0D44_02800 PF00378 Enoyl-CoA hydratase/isomerase M0D44_02810 PF10576 Iron-sulfur binding domain of endonuclease III M0D44_02810 PF00633 Helix-hairpin-helix motif M0D44_02810 PF00730 HhH-GPD superfamily base excision DNA repair protein M0D44_02815 PF01740 STAS domain M0D44_02815 PF00916 Sulfate permease family M0D44_02820 PF00484 Carbonic anhydrase M0D44_02835 PF12849 PBP superfamily domain M0D44_02840 PF12849 PBP superfamily domain M0D44_02845 PF00528 Binding-protein-dependent transport system inner membrane component M0D44_02850 PF00528 Binding-protein-dependent transport system inner membrane component M0D44_02855 PF00005 ABC transporter M0D44_02860 PF01895 PhoU domain M0D44_02870 PF00929 Exonuclease M0D44_02875 PF00990 Diguanylate cyclase, GGDEF domain M0D44_02880 PF08032 RNA 2'-O ribose methyltransferase substrate binding M0D44_02880 PF00588 SpoU rRNA Methylase family M0D44_02890 PF00575 S1 RNA binding domain M0D44_02890 PF00773 RNB domain M0D44_02890 PF08461 Ribonuclease R winged-helix domain M0D44_02890 PF17876 Cold shock domain M0D44_02890 PF08206 Ribonuclease B OB domain M0D44_02905 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M0D44_02905 PF02770 Acyl-CoA dehydrogenase, middle domain M0D44_02905 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M0D44_02910 PF01209 ubiE/COQ5 methyltransferase family M0D44_02915 PF02574 Homocysteine S-methyltransferase M0D44_02915 PF00809 Pterin binding enzyme M0D44_02925 PF02965 Vitamin B12 dependent methionine synthase, activation domain M0D44_02925 PF00809 Pterin binding enzyme M0D44_02925 PF02574 Homocysteine S-methyltransferase M0D44_02925 PF02607 B12 binding domain M0D44_02925 PF02310 B12 binding domain M0D44_02935 PF00294 pfkB family carbohydrate kinase M0D44_02940 PF07690 Major Facilitator Superfamily M0D44_02945 PF00356 Bacterial regulatory proteins, lacI family M0D44_02960 PF04102 SlyX M0D44_02965 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M0D44_02965 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M0D44_02965 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M0D44_02970 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M0D44_02970 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M0D44_02975 PF00255 Glutathione peroxidase M0D44_02985 PF00392 Bacterial regulatory proteins, gntR family M0D44_02990 PF00005 ABC transporter M0D44_03020 PF10415 Fumarase C C-terminus M0D44_03020 PF00206 Lyase M0D44_03025 PF01595 Cyclin M transmembrane N-terminal domain M0D44_03025 PF03471 Transporter associated domain M0D44_03025 PF00571 CBS domain M0D44_03035 PF00206 Lyase M0D44_03035 PF08328 Adenylosuccinate lyase C-terminal M0D44_03050 PF08007 Cupin superfamily protein M0D44_03060 PF16078 2-oxoglutarate dehydrogenase N-terminus M0D44_03060 PF02779 Transketolase, pyrimidine binding domain M0D44_03060 PF16870 2-oxoglutarate dehydrogenase C-terminal M0D44_03060 PF00676 Dehydrogenase E1 component M0D44_03065 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M0D44_03065 PF02817 e3 binding domain M0D44_03065 PF00364 Biotin-requiring enzyme M0D44_03070 PF07992 Pyridine nucleotide-disulphide oxidoreductase M0D44_03070 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M0D44_03080 PF03641 Possible lysine decarboxylase M0D44_03085 PF01205 Uncharacterized protein family UPF0029 M0D44_03090 PF00664 ABC transporter transmembrane region M0D44_03090 PF00005 ABC transporter M0D44_03100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D44_03100 PF03466 LysR substrate binding domain M0D44_03105 PF00664 ABC transporter transmembrane region M0D44_03105 PF00005 ABC transporter M0D44_03105 PF03412 Peptidase C39 family M0D44_03130 PF08543 Phosphomethylpyrimidine kinase M0D44_03140 PF00684 DnaJ central domain M0D44_03140 PF00226 DnaJ domain M0D44_03140 PF01556 DnaJ C terminal domain M0D44_03145 PF00012 Hsp70 protein M0D44_03150 PF01025 GrpE M0D44_03155 PF01628 HrcA protein C terminal domain M0D44_03155 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding M0D44_03160 PF02463 RecF/RecN/SMC N terminal domain M0D44_03165 PF01475 Ferric uptake regulator family M0D44_03170 PF04355 SmpA / OmlA family M0D44_03175 PF03658 RnfH family Ubiquitin M0D44_03180 PF03364 Polyketide cyclase / dehydrase and lipid transport M0D44_03185 PF01668 SmpB protein M0D44_03190 PF00082 Subtilase family M0D44_03250 PF00990 Diguanylate cyclase, GGDEF domain M0D44_03260 PF00990 Diguanylate cyclase, GGDEF domain M0D44_03265 PF02321 Outer membrane efflux protein M0D44_03270 PF00106 short chain dehydrogenase M0D44_03275 PF00873 AcrB/AcrD/AcrF family M0D44_03280 PF00529 HlyD membrane-fusion protein of T1SS M0D44_03280 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M0D44_03295 PF03466 LysR substrate binding domain M0D44_03295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D44_03300 PF05736 OprF membrane domain M0D44_03300 PF00691 OmpA family M0D44_03305 PF00875 DNA photolyase M0D44_03305 PF03441 FAD binding domain of DNA photolyase M0D44_03310 PF00772 DnaB-like helicase N terminal domain M0D44_03310 PF03796 DnaB-like helicase C terminal domain M0D44_03315 PF03358 NADPH-dependent FMN reductase M0D44_03320 PF00733 Asparagine synthase M0D44_03320 PF13537 Glutamine amidotransferase domain M0D44_03330 PF00043 Glutathione S-transferase, C-terminal domain M0D44_03330 PF02798 Glutathione S-transferase, N-terminal domain M0D44_03340 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M0D44_03340 PF02770 Acyl-CoA dehydrogenase, middle domain M0D44_03340 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M0D44_03355 PF01026 TatD related DNase M0D44_03360 PF00899 ThiF family M0D44_03375 PF00313 'Cold-shock' DNA-binding domain M0D44_03400 PF13291 ACT domain M0D44_03400 PF00291 Pyridoxal-phosphate dependent enzyme M0D44_03420 PF05598 Transposase domain (DUF772) M0D44_03430 PF02253 Phospholipase A1 M0D44_03440 PF05681 Fumarate hydratase (Fumerase) M0D44_03440 PF05683 Fumarase C-terminus M0D44_03445 PF00005 ABC transporter M0D44_03450 PF00175 Oxidoreductase NAD-binding domain M0D44_03450 PF00970 Oxidoreductase FAD-binding domain M0D44_03455 PF00255 Glutathione peroxidase M0D44_03460 PF01432 Peptidase family M3 M0D44_03470 PF00082 Subtilase family M0D44_03475 PF04542 Sigma-70 region 2 M0D44_03475 PF08281 Sigma-70, region 4 M0D44_03510 PF00854 POT family M0D44_03520 PF00933 Glycosyl hydrolase family 3 N terminal domain M0D44_03520 PF14310 Fibronectin type III-like domain M0D44_03520 PF01915 Glycosyl hydrolase family 3 C-terminal domain M0D44_03535 PF00144 Beta-lactamase M0D44_03540 PF07690 Major Facilitator Superfamily M0D44_03545 PF00529 HlyD membrane-fusion protein of T1SS M0D44_03545 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M0D44_03550 PF02321 Outer membrane efflux protein M0D44_03565 PF00521 DNA gyrase/topoisomerase IV, subunit A M0D44_03565 PF03989 DNA gyrase C-terminal domain, beta-propeller M0D44_03570 PF05724 Thiopurine S-methyltransferase (TPMT) M0D44_03575 PF00210 Ferritin-like domain M0D44_03580 PF01804 Penicillin amidase M0D44_03590 PF00106 short chain dehydrogenase M0D44_03595 PF00593 TonB dependent receptor M0D44_03595 PF07715 TonB-dependent Receptor Plug Domain M0D44_03605 PF13537 Glutamine amidotransferase domain M0D44_03605 PF00733 Asparagine synthase M0D44_03610 PF01546 Peptidase family M20/M25/M40 M0D44_03610 PF07687 Peptidase dimerisation domain M0D44_03620 PF03960 ArsC family M0D44_03630 PF00132 Bacterial transferase hexapeptide (six repeats) M0D44_03630 PF14602 Hexapeptide repeat of succinyl-transferase M0D44_03630 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal M0D44_03635 PF08335 GlnD PII-uridylyltransferase M0D44_03635 PF01966 HD domain M0D44_03635 PF01909 Nucleotidyltransferase domain M0D44_03640 PF00557 Metallopeptidase family M24 M0D44_03675 PF00318 Ribosomal protein S2 M0D44_03680 PF00889 Elongation factor TS M0D44_03685 PF00990 Diguanylate cyclase, GGDEF domain M0D44_03685 PF00072 Response regulator receiver domain M0D44_03690 PF00696 Amino acid kinase family M0D44_03695 PF01765 Ribosome recycling factor M0D44_03700 PF01255 Putative undecaprenyl diphosphate synthase M0D44_03710 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain M0D44_03710 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase M0D44_03710 PF13288 DXP reductoisomerase C-terminal domain M0D44_03715 PF17820 PDZ domain M0D44_03715 PF02163 Peptidase family M50 M0D44_03720 PF07244 Surface antigen variable number repeat M0D44_03720 PF01103 Surface antigen M0D44_03730 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD M0D44_03730 PF00132 Bacterial transferase hexapeptide (six repeats) M0D44_03735 PF07977 FabA-like domain M0D44_03740 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 M0D44_03740 PF00132 Bacterial transferase hexapeptide (six repeats) M0D44_03745 PF02684 Lipid-A-disaccharide synthetase M0D44_03750 PF01351 Ribonuclease HII M0D44_03755 PF07733 Bacterial DNA polymerase III alpha NTPase domain M0D44_03755 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M0D44_03755 PF14579 Helix-hairpin-helix motif M0D44_03755 PF02811 PHP domain M0D44_03755 PF01336 OB-fold nucleic acid binding domain M0D44_03785 PF03653 Uncharacterised protein family (UPF0093) M0D44_03805 PF03551 Transcriptional regulator PadR-like family M0D44_03825 PF02592 Putative vitamin uptake transporter M0D44_03840 PF01636 Phosphotransferase enzyme family M0D44_03845 PF02574 Homocysteine S-methyltransferase M0D44_03850 PF00324 Amino acid permease M0D44_03855 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M0D44_03860 PF13732 Domain of unknown function (DUF4162) M0D44_03860 PF00005 ABC transporter M0D44_03875 PF01588 Putative tRNA binding domain M0D44_03875 PF09334 tRNA synthetases class I (M) M0D44_03885 PF04060 Putative Fe-S cluster M0D44_03900 PF04542 Sigma-70 region 2 M0D44_03900 PF04545 Sigma-70, region 4 M0D44_03945 PF01042 Endoribonuclease L-PSP M0D44_03955 PF09924 Uncharacterised conserved protein (DUF2156) M0D44_03955 PF03706 Lysylphosphatidylglycerol synthase TM region M0D44_03990 PF07690 Major Facilitator Superfamily M0D44_03995 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M0D44_04000 PF03831 PhnA domain M0D44_04000 PF08274 PhnA Zinc-Ribbon M0D44_04010 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M0D44_04035 PF08281 Sigma-70, region 4 M0D44_04035 PF04542 Sigma-70 region 2 M0D44_04045 PF01258 Prokaryotic dksA/traR C4-type zinc finger M0D44_04055 PF07043 Protein of unknown function (DUF1328) M0D44_04060 PF01863 Protein of unknown function DUF45 M0D44_04075 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M0D44_04075 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M0D44_04080 PF03797 Autotransporter beta-domain M0D44_04080 PF12951 Passenger-associated-transport-repeat M0D44_04080 PF00082 Subtilase family M0D44_04085 PF02803 Thiolase, C-terminal domain M0D44_04085 PF00108 Thiolase, N-terminal domain M0D44_04100 PF00990 Diguanylate cyclase, GGDEF domain M0D44_04100 PF00072 Response regulator receiver domain M0D44_04115 PF04679 ATP dependent DNA ligase C terminal region M0D44_04115 PF01068 ATP dependent DNA ligase domain M0D44_04115 PF04675 DNA ligase N terminus M0D44_04125 PF04679 ATP dependent DNA ligase C terminal region M0D44_04125 PF01068 ATP dependent DNA ligase domain M0D44_04125 PF04675 DNA ligase N terminus M0D44_04130 PF00270 DEAD/DEAH box helicase M0D44_04130 PF08494 DEAD/H associated M0D44_04130 PF00271 Helicase conserved C-terminal domain M0D44_04145 PF00313 'Cold-shock' DNA-binding domain M0D44_04150 PF01048 Phosphorylase superfamily M0D44_04155 PF00156 Phosphoribosyl transferase domain M0D44_04160 PF00933 Glycosyl hydrolase family 3 N terminal domain M0D44_04165 PF04244 Deoxyribodipyrimidine photo-lyase-related protein M0D44_04170 PF01593 Flavin containing amine oxidoreductase M0D44_04175 PF01323 DSBA-like thioredoxin domain M0D44_04180 PF01928 CYTH domain M0D44_04185 PF05958 tRNA (Uracil-5-)-methyltransferase M0D44_04195 PF02565 Recombination protein O C terminal M0D44_04195 PF11967 Recombination protein O N terminal M0D44_04200 PF01926 50S ribosome-binding GTPase M0D44_04200 PF07650 KH domain M0D44_04205 PF00035 Double-stranded RNA binding motif M0D44_04205 PF14622 Ribonuclease-III-like M0D44_04215 PF10502 Signal peptidase, peptidase S26 M0D44_04220 PF00679 Elongation factor G C-terminus M0D44_04220 PF00009 Elongation factor Tu GTP binding domain M0D44_04220 PF03144 Elongation factor Tu domain 2 M0D44_04220 PF06421 GTP-binding protein LepA C-terminus M0D44_04225 PF13180 PDZ domain M0D44_04235 PF04542 Sigma-70 region 2 M0D44_04235 PF08281 Sigma-70, region 4 M0D44_04240 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M0D44_04240 PF00378 Enoyl-CoA hydratase/isomerase M0D44_04240 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M0D44_04245 PF01545 Cation efflux family M0D44_04255 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M0D44_04255 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M0D44_04260 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M0D44_04260 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M0D44_04260 PF00378 Enoyl-CoA hydratase/isomerase M0D44_04265 PF00378 Enoyl-CoA hydratase/isomerase M0D44_04270 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M0D44_04270 PF02770 Acyl-CoA dehydrogenase, middle domain M0D44_04270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M0D44_04275 PF00171 Aldehyde dehydrogenase family M0D44_04280 PF09856 Predicted transcriptional regulator (DUF2083) M0D44_04280 PF01381 Helix-turn-helix M0D44_04280 PF06114 IrrE N-terminal-like domain M0D44_04290 PF07745 Glycosyl hydrolase family 53 M0D44_04295 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 M0D44_04295 PF00703 Glycosyl hydrolases family 2 M0D44_04295 PF02836 Glycosyl hydrolases family 2, TIM barrel domain M0D44_04295 PF02837 Glycosyl hydrolases family 2, sugar binding domain M0D44_04295 PF16355 Domain of unknown function (DUF4982) M0D44_04310 PF05192 MutS domain III M0D44_04310 PF05188 MutS domain II M0D44_04310 PF00488 MutS domain V M0D44_04310 PF01624 MutS domain I M0D44_04310 PF05190 MutS family domain IV M0D44_04315 PF00005 ABC transporter M0D44_04320 PF00950 ABC 3 transport family M0D44_04325 PF01297 Zinc-uptake complex component A periplasmic M0D44_04330 PF07683 Cobalamin synthesis protein cobW C-terminal domain M0D44_04330 PF02492 CobW/HypB/UreG, nucleotide-binding domain M0D44_04340 PF00593 TonB dependent receptor M0D44_04340 PF07715 TonB-dependent Receptor Plug Domain M0D44_04360 PF00141 Peroxidase M0D44_04365 PF01479 S4 domain M0D44_04370 PF01554 MatE M0D44_04375 PF01245 Ribosomal protein L19 M0D44_04380 PF01746 tRNA (Guanine-1)-methyltransferase M0D44_04385 PF05239 PRC-barrel domain M0D44_04385 PF01782 RimM N-terminal domain M0D44_04390 PF00886 Ribosomal protein S16 M0D44_04400 PF03060 Nitronate monooxygenase M0D44_04405 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) M0D44_04410 PF00448 SRP54-type protein, GTPase domain M0D44_04410 PF02881 SRP54-type protein, helical bundle domain M0D44_04410 PF02978 Signal peptide binding domain M0D44_04415 PF01578 Cytochrome C assembly protein M0D44_04420 PF01263 Aldose 1-epimerase M0D44_04425 PF06964 Alpha-L-arabinofuranosidase C-terminal domain M0D44_04430 PF03466 LysR substrate binding domain M0D44_04430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D44_04445 PF00072 Response regulator receiver domain M0D44_04450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_04450 PF13426 PAS domain M0D44_04450 PF00072 Response regulator receiver domain M0D44_04455 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M0D44_04455 PF00072 Response regulator receiver domain M0D44_04455 PF01627 Hpt domain M0D44_04455 PF00512 His Kinase A (phospho-acceptor) domain M0D44_04455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_04455 PF00672 HAMP domain M0D44_04460 PF01739 CheR methyltransferase, SAM binding domain M0D44_04460 PF03705 CheR methyltransferase, all-alpha domain M0D44_04465 PF01339 CheB methylesterase M0D44_04470 PF00072 Response regulator receiver domain M0D44_04470 PF00990 Diguanylate cyclase, GGDEF domain M0D44_04475 PF07237 Protein of unknown function (DUF1428) M0D44_04480 PF00085 Thioredoxin M0D44_04485 PF07715 TonB-dependent Receptor Plug Domain M0D44_04485 PF00593 TonB dependent receptor M0D44_04490 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain M0D44_04490 PF04616 Glycosyl hydrolases family 43 M0D44_04495 PF00072 Response regulator receiver domain M0D44_04495 PF08448 PAS fold M0D44_04495 PF13188 PAS domain M0D44_04495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_04495 PF00512 His Kinase A (phospho-acceptor) domain M0D44_04500 PF00512 His Kinase A (phospho-acceptor) domain M0D44_04500 PF00672 HAMP domain M0D44_04500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_04500 PF17149 Periplasmic sensor domain found in signal transduction proteins M0D44_04500 PF01627 Hpt domain M0D44_04500 PF00072 Response regulator receiver domain M0D44_04510 PF13581 Histidine kinase-like ATPase domain M0D44_04515 PF01740 STAS domain M0D44_04520 PF01740 STAS domain M0D44_04520 PF08678 Rsbr N terminal M0D44_04530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_04530 PF00183 Hsp90 protein M0D44_04535 PF12833 Helix-turn-helix domain M0D44_04545 PF05656 Protein of unknown function (DUF805) M0D44_04550 PF18073 Rubredoxin metal binding domain M0D44_04555 PF00155 Aminotransferase class I and II M0D44_04565 PF03626 Prokaryotic Cytochrome C oxidase subunit IV M0D44_04570 PF00510 Cytochrome c oxidase subunit III M0D44_04575 PF00115 Cytochrome C and Quinol oxidase polypeptide I M0D44_04580 PF00116 Cytochrome C oxidase subunit II, periplasmic domain M0D44_04580 PF06481 COX Aromatic Rich Motif M0D44_04590 PF02401 LytB protein M0D44_04595 PF01252 Signal peptidase (SPase) II M0D44_04600 PF06827 Zinc finger found in FPG and IleRS M0D44_04600 PF00133 tRNA synthetases class I (I, L, M and V) M0D44_04600 PF08264 Anticodon-binding domain of tRNA M0D44_04610 PF03023 Lipid II flippase MurJ M0D44_04615 PF01649 Ribosomal protein S20 M0D44_04625 PF01016 Ribosomal L27 protein M0D44_04630 PF00829 Ribosomal prokaryotic L21 protein M0D44_04635 PF00005 ABC transporter M0D44_04635 PF17760 UvrA interaction domain M0D44_04635 PF17755 UvrA DNA-binding domain M0D44_04650 PF00378 Enoyl-CoA hydratase/isomerase M0D44_04665 PF08281 Sigma-70, region 4 M0D44_04665 PF04542 Sigma-70 region 2 M0D44_04680 PF04376 Arginine-tRNA-protein transferase, N terminus M0D44_04680 PF04377 Arginine-tRNA-protein transferase, C terminus M0D44_04700 PF02222 ATP-grasp domain M0D44_04725 PF13026 Protein of unknown function (DUF3887) M0D44_04725 PF12146 Serine aminopeptidase, S33 M0D44_04745 PF00730 HhH-GPD superfamily base excision DNA repair protein M0D44_04760 PF00196 Bacterial regulatory proteins, luxR family M0D44_04760 PF00072 Response regulator receiver domain M0D44_04765 PF07730 Histidine kinase M0D44_04775 PF03775 Septum formation inhibitor MinC, C-terminal domain M0D44_04775 PF05209 Septum formation inhibitor MinC, N-terminal domain M0D44_04780 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain M0D44_04785 PF03776 Septum formation topological specificity factor MinE M0D44_04795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_04795 PF08521 Two-component sensor kinase N-terminal M0D44_04795 PF00512 His Kinase A (phospho-acceptor) domain M0D44_04800 PF00072 Response regulator receiver domain M0D44_04800 PF00486 Transcriptional regulatory protein, C terminal M0D44_04805 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase M0D44_04815 PF00884 Sulfatase M0D44_04815 PF08019 Phosphoethanolamine transferase EptA/EptB M0D44_04830 PF07690 Major Facilitator Superfamily M0D44_04835 PF00664 ABC transporter transmembrane region M0D44_04835 PF03412 Peptidase C39 family M0D44_04835 PF00005 ABC transporter M0D44_04855 PF02347 Glycine cleavage system P-protein M0D44_04860 PF00135 Carboxylesterase family M0D44_04865 PF00248 Aldo/keto reductase family M0D44_04870 PF18011 C-terminal domain found in long catalases M0D44_04870 PF06628 Catalase-related immune-responsive M0D44_04870 PF00199 Catalase M0D44_04895 PF12833 Helix-turn-helix domain M0D44_04895 PF02311 AraC-like ligand binding domain M0D44_04905 PF00326 Prolyl oligopeptidase family M0D44_04905 PF07676 WD40-like Beta Propeller Repeat M0D44_04905 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region M0D44_04915 PF03169 OPT oligopeptide transporter protein M0D44_04940 PF14579 Helix-hairpin-helix motif M0D44_04940 PF07733 Bacterial DNA polymerase III alpha NTPase domain M0D44_04940 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M0D44_04940 PF02811 PHP domain M0D44_04955 PF01726 LexA DNA binding domain M0D44_04955 PF00717 Peptidase S24-like M0D44_04990 PF00111 2Fe-2S iron-sulfur cluster binding domain M0D44_04990 PF01799 [2Fe-2S] binding domain M0D44_04995 PF00941 FAD binding domain in molybdopterin dehydrogenase M0D44_04995 PF03450 CO dehydrogenase flavoprotein C-terminal domain M0D44_05000 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain M0D44_05000 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase M0D44_05010 PF08240 Alcohol dehydrogenase GroES-like domain M0D44_05010 PF00107 Zinc-binding dehydrogenase M0D44_05015 PF17755 UvrA DNA-binding domain M0D44_05035 PF07992 Pyridine nucleotide-disulphide oxidoreductase M0D44_05045 PF07971 Glycosyl hydrolase family 92 M0D44_05045 PF17678 Glycosyl hydrolase family 92 N-terminal domain M0D44_05070 PF00300 Histidine phosphatase superfamily (branch 1) M0D44_05070 PF13456 Reverse transcriptase-like M0D44_05095 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) M0D44_05095 PF08463 EcoEI R protein C-terminal M0D44_05095 PF00271 Helicase conserved C-terminal domain M0D44_05095 PF04851 Type III restriction enzyme, res subunit M0D44_05100 PF02661 Fic/DOC family M0D44_05105 PF02384 N-6 DNA Methylase M0D44_05110 PF01420 Type I restriction modification DNA specificity domain M0D44_05125 PF00440 Bacterial regulatory proteins, tetR family M0D44_05145 PF01433 Peptidase family M1 domain M0D44_05145 PF11838 ERAP1-like C-terminal domain M0D44_05150 PF00709 Adenylosuccinate synthetase M0D44_05165 PF01145 SPFH domain / Band 7 family M0D44_05170 PF12221 Bacterial membrane protein N terminal M0D44_05170 PF01145 SPFH domain / Band 7 family M0D44_05175 PF00072 Response regulator receiver domain M0D44_05180 PF01556 DnaJ C terminal domain M0D44_05180 PF00226 DnaJ domain M0D44_05190 PF08534 Redoxin M0D44_05200 PF00905 Penicillin binding protein transpeptidase domain M0D44_05200 PF00912 Transglycosylase M0D44_05200 PF06832 Penicillin-Binding Protein C-terminus Family M0D44_05215 PF00207 Alpha-2-macroglobulin family M0D44_05215 PF07703 Alpha-2-macroglobulin bait region domain M0D44_05215 PF11974 Bacterial alpha-2-macroglobulin MG3 domain M0D44_05215 PF01835 MG2 domain M0D44_05215 PF17962 Bacterial macroglobulin domain 6 M0D44_05215 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain M0D44_05215 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain M0D44_05215 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain M0D44_05225 PF00593 TonB dependent receptor M0D44_05225 PF07715 TonB-dependent Receptor Plug Domain M0D44_05230 PF04303 PrpF protein M0D44_05240 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH M0D44_05245 PF00330 Aconitase family (aconitate hydratase) M0D44_05245 PF00694 Aconitase C-terminal domain M0D44_05250 PF00285 Citrate synthase, C-terminal domain M0D44_05260 PF06506 Propionate catabolism activator M0D44_05260 PF02954 Bacterial regulatory protein, Fis family M0D44_05260 PF00158 Sigma-54 interaction domain M0D44_05280 PF09115 DNA polymerase III, delta subunit, C terminal M0D44_05285 PF02618 YceG-like family M0D44_05290 PF04715 Anthranilate synthase component I, N terminal region M0D44_05290 PF00425 chorismate binding enzyme M0D44_05295 PF00109 Beta-ketoacyl synthase, N-terminal domain M0D44_05295 PF02801 Beta-ketoacyl synthase, C-terminal domain M0D44_05300 PF00550 Phosphopantetheine attachment site M0D44_05310 PF00698 Acyl transferase domain M0D44_05320 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M0D44_05320 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M0D44_05325 PF01783 Ribosomal L32p protein family M0D44_05330 PF02620 Large ribosomal RNA subunit accumulation protein YceD M0D44_05335 PF02545 Maf-like protein M0D44_05350 PF17863 AAA lid domain M0D44_05350 PF07726 ATPase family associated with various cellular activities (AAA) M0D44_05360 PF13559 Domain of unknown function (DUF4129) M0D44_05360 PF01841 Transglutaminase-like superfamily M0D44_05360 PF11992 Domain of unknown function (DUF3488) M0D44_05370 PF01230 HIT domain M0D44_05375 PF02132 RecR protein M0D44_05375 PF13662 Toprim domain M0D44_05380 PF02575 YbaB/EbfC DNA-binding family M0D44_05385 PF12169 DNA polymerase III subunits gamma and tau domain III M0D44_05385 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding M0D44_05385 PF12170 DNA polymerase III tau subunit V interacting with alpha M0D44_05400 PF02391 MoaE protein M0D44_05405 PF02597 ThiS family M0D44_05410 PF01967 MoaC family M0D44_05420 PF04055 Radical SAM superfamily M0D44_05420 PF06463 Molybdenum Cofactor Synthesis C M0D44_05435 PF01075 Glycosyltransferase family 9 (heptosyltransferase) M0D44_05460 PF00929 Exonuclease M0D44_05465 PF00075 RNase H M0D44_05475 PF16123 Hydroxyacylglutathione hydrolase C-terminus M0D44_05475 PF00753 Metallo-beta-lactamase superfamily M0D44_05480 PF05257 CHAP domain M0D44_05480 PF01476 LysM domain M0D44_05505 PF00216 Bacterial DNA-binding protein M0D44_05510 PF00004 ATPase family associated with various cellular activities (AAA) M0D44_05510 PF05362 Lon protease (S16) C-terminal proteolytic domain M0D44_05510 PF02190 ATP-dependent protease La (LON) substrate-binding domain M0D44_05515 PF07724 AAA domain (Cdc48 subfamily) M0D44_05515 PF10431 C-terminal, D2-small domain, of ClpB protein M0D44_05515 PF06689 ClpX C4-type zinc finger M0D44_05520 PF00574 Clp protease M0D44_05525 PF05697 Bacterial trigger factor protein (TF) M0D44_05525 PF05698 Bacterial trigger factor protein (TF) C-terminus M0D44_05535 PF00072 Response regulator receiver domain M0D44_05535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_05535 PF13426 PAS domain M0D44_05575 PF00180 Isocitrate/isopropylmalate dehydrogenase M0D44_05575 PF18324 Hypothetical protein TT1725 M0D44_05585 PF00462 Glutaredoxin M0D44_05590 PF01435 Peptidase family M48 M0D44_05590 PF13181 Tetratricopeptide repeat M0D44_05595 PF00072 Response regulator receiver domain M0D44_05595 PF00486 Transcriptional regulatory protein, C terminal M0D44_05600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_05600 PF00512 His Kinase A (phospho-acceptor) domain M0D44_05600 PF00989 PAS fold M0D44_05600 PF11808 Phosphate regulon sensor protein PhoR M0D44_05605 PF17941 Polyphosphate kinase C-terminal domain 1 M0D44_05605 PF13089 Polyphosphate kinase N-terminal domain M0D44_05605 PF02503 Polyphosphate kinase middle domain M0D44_05605 PF13090 Polyphosphate kinase C-terminal domain 2 M0D44_05610 PF02541 Ppx/GppA phosphatase family M0D44_05615 PF13439 Glycosyltransferase Family 4 M0D44_05615 PF00534 Glycosyl transferases group 1 M0D44_05620 PF01569 PAP2 superfamily M0D44_05625 PF00149 Calcineurin-like phosphoesterase M0D44_05640 PF04305 Protein of unknown function (DUF455) M0D44_05650 PF00156 Phosphoribosyl transferase domain M0D44_05665 PF02875 Mur ligase family, glutamate ligase domain M0D44_05665 PF08245 Mur ligase middle domain M0D44_05680 PF00300 Histidine phosphatase superfamily (branch 1) M0D44_05685 PF10459 Peptidase S46 M0D44_05690 PF05506 Domain of unknown function (DUF756) M0D44_05690 PF04185 Phosphoesterase family M0D44_05700 PF08240 Alcohol dehydrogenase GroES-like domain M0D44_05700 PF00107 Zinc-binding dehydrogenase M0D44_05710 PF00005 ABC transporter M0D44_05710 PF17850 CysA C-terminal regulatory domain M0D44_05710 PF12857 TOBE-like domain M0D44_05715 PF00528 Binding-protein-dependent transport system inner membrane component M0D44_05720 PF00528 Binding-protein-dependent transport system inner membrane component M0D44_05730 PF00155 Aminotransferase class I and II M0D44_05740 PF00849 RNA pseudouridylate synthase M0D44_05750 PF00691 OmpA family M0D44_05750 PF00223 Photosystem I psaA/psaB protein M0D44_05755 PF08240 Alcohol dehydrogenase GroES-like domain M0D44_05755 PF00107 Zinc-binding dehydrogenase M0D44_05760 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M0D44_05760 PF07992 Pyridine nucleotide-disulphide oxidoreductase M0D44_05775 PF00043 Glutathione S-transferase, C-terminal domain M0D44_05775 PF02798 Glutathione S-transferase, N-terminal domain M0D44_05780 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain M0D44_05780 PF00056 lactate/malate dehydrogenase, NAD binding domain M0D44_05785 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M0D44_05790 PF03144 Elongation factor Tu domain 2 M0D44_05790 PF00009 Elongation factor Tu GTP binding domain M0D44_05790 PF00679 Elongation factor G C-terminus M0D44_05800 PF01425 Amidase M0D44_05810 PF01474 Class-II DAHP synthetase family M0D44_05820 PF02600 Disulfide bond formation protein DsbB M0D44_05825 PF01196 Ribosomal protein L17 M0D44_05830 PF01000 RNA polymerase Rpb3/RpoA insert domain M0D44_05830 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain M0D44_05830 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain M0D44_05835 PF00163 Ribosomal protein S4/S9 N-terminal domain M0D44_05835 PF01479 S4 domain M0D44_05840 PF00411 Ribosomal protein S11 M0D44_05845 PF00416 Ribosomal protein S13/S18 M0D44_05850 PF00344 SecY translocase M0D44_05855 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A M0D44_05860 PF00327 Ribosomal protein L30p/L7e M0D44_05865 PF00333 Ribosomal protein S5, N-terminal domain M0D44_05865 PF03719 Ribosomal protein S5, C-terminal domain M0D44_05870 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast M0D44_05875 PF00347 Ribosomal protein L6 M0D44_05880 PF00410 Ribosomal protein S8 M0D44_05885 PF00253 Ribosomal protein S14p/S29e M0D44_05890 PF00281 Ribosomal protein L5 M0D44_05890 PF00673 ribosomal L5P family C-terminus M0D44_05895 PF00467 KOW motif M0D44_05895 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 M0D44_05900 PF00238 Ribosomal protein L14p/L23e M0D44_05905 PF00366 Ribosomal protein S17 M0D44_05910 PF00831 Ribosomal L29 protein M0D44_05915 PF00252 Ribosomal protein L16p/L10e M0D44_05920 PF07650 KH domain M0D44_05920 PF00189 Ribosomal protein S3, C-terminal domain M0D44_05925 PF00237 Ribosomal protein L22p/L17e M0D44_05930 PF00203 Ribosomal protein S19 M0D44_05935 PF03947 Ribosomal Proteins L2, C-terminal domain M0D44_05935 PF00181 Ribosomal Proteins L2, RNA binding domain M0D44_05940 PF00276 Ribosomal protein L23 M0D44_05945 PF00573 Ribosomal protein L4/L1 family M0D44_05950 PF00297 Ribosomal protein L3 M0D44_05955 PF00338 Ribosomal protein S10p/S20e M0D44_05970 PF00009 Elongation factor Tu GTP binding domain M0D44_05970 PF03144 Elongation factor Tu domain 2 M0D44_05970 PF03143 Elongation factor Tu C-terminal domain M0D44_05975 PF00679 Elongation factor G C-terminus M0D44_05975 PF14492 Elongation Factor G, domain II M0D44_05975 PF03764 Elongation factor G, domain IV M0D44_05975 PF00009 Elongation factor Tu GTP binding domain M0D44_05975 PF03144 Elongation factor Tu domain 2 M0D44_05980 PF00177 Ribosomal protein S7p/S5e M0D44_05985 PF00164 Ribosomal protein S12/S23 M0D44_05990 PF05000 RNA polymerase Rpb1, domain 4 M0D44_05990 PF04983 RNA polymerase Rpb1, domain 3 M0D44_05990 PF04997 RNA polymerase Rpb1, domain 1 M0D44_05990 PF04998 RNA polymerase Rpb1, domain 5 M0D44_05990 PF00623 RNA polymerase Rpb1, domain 2 M0D44_05995 PF04563 RNA polymerase beta subunit M0D44_05995 PF04561 RNA polymerase Rpb2, domain 2 M0D44_05995 PF04565 RNA polymerase Rpb2, domain 3 M0D44_05995 PF10385 RNA polymerase beta subunit external 1 domain M0D44_05995 PF00562 RNA polymerase Rpb2, domain 6 M0D44_05995 PF04560 RNA polymerase Rpb2, domain 7 M0D44_06005 PF00466 Ribosomal protein L10 M0D44_06010 PF00687 Ribosomal protein L1p/L10e family M0D44_06015 PF03946 Ribosomal protein L11, N-terminal domain M0D44_06015 PF00298 Ribosomal protein L11, RNA binding domain M0D44_06020 PF02357 Transcription termination factor nusG M0D44_06020 PF00467 KOW motif M0D44_06025 PF00584 SecE/Sec61-gamma subunits of protein translocation complex M0D44_06035 PF03144 Elongation factor Tu domain 2 M0D44_06035 PF03143 Elongation factor Tu C-terminal domain M0D44_06035 PF00009 Elongation factor Tu GTP binding domain M0D44_06055 PF06071 Protein of unknown function (DUF933) M0D44_06055 PF01926 50S ribosome-binding GTPase M0D44_06060 PF01195 Peptidyl-tRNA hydrolase M0D44_06065 PF14693 Ribosomal protein TL5, C-terminal domain M0D44_06065 PF01386 Ribosomal L25p family M0D44_06070 PF14572 Phosphoribosyl synthetase-associated domain M0D44_06070 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M0D44_06080 PF08544 GHMP kinases C terminal M0D44_06080 PF00288 GHMP kinases N terminal domain M0D44_06085 PF03550 Outer membrane lipoprotein LolB M0D44_06095 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain M0D44_06095 PF01488 Shikimate / quinate 5-dehydrogenase M0D44_06095 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain M0D44_06100 PF00472 RF-1 domain M0D44_06100 PF03462 PCRF domain M0D44_06110 PF00994 Probable molybdopterin binding domain M0D44_06115 PF03976 Polyphosphate kinase 2 (PPK2) M0D44_06125 PF00708 Acylphosphatase M0D44_06130 PF08534 Redoxin M0D44_06135 PF03631 Virulence factor BrkB M0D44_06140 PF03358 NADPH-dependent FMN reductase M0D44_06155 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain M0D44_06155 PF17189 Glycosyl hydrolase family 30 beta sandwich domain M0D44_06165 PF04073 Aminoacyl-tRNA editing domain M0D44_06170 PF04151 Bacterial pre-peptidase C-terminal domain M0D44_06170 PF00082 Subtilase family M0D44_06175 PF00082 Subtilase family M0D44_06175 PF04151 Bacterial pre-peptidase C-terminal domain M0D44_06180 PF00082 Subtilase family M0D44_06180 PF04151 Bacterial pre-peptidase C-terminal domain M0D44_06185 PF01063 Amino-transferase class IV M0D44_06200 PF02233 NAD(P) transhydrogenase beta subunit M0D44_06205 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch M0D44_06225 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch M0D44_06225 PF05222 Alanine dehydrogenase/PNT, N-terminal domain M0D44_06225 PF01262 Alanine dehydrogenase/PNT, C-terminal domain M0D44_06250 PF01612 3'-5' exonuclease M0D44_06250 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M0D44_06250 PF01367 5'-3' exonuclease, C-terminal SAM fold M0D44_06250 PF00476 DNA polymerase family A M0D44_06255 PF00293 NUDIX domain M0D44_06265 PF00561 alpha/beta hydrolase fold M0D44_06280 PF05175 Methyltransferase small domain M0D44_06280 PF17827 PrmC N-terminal domain M0D44_06285 PF10417 C-terminal domain of 1-Cys peroxiredoxin M0D44_06285 PF00578 AhpC/TSA family M0D44_06290 PF07992 Pyridine nucleotide-disulphide oxidoreductase M0D44_06290 PF13192 Thioredoxin domain M0D44_06295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D44_06295 PF03466 LysR substrate binding domain M0D44_06305 PF14760 Rnk N-terminus M0D44_06305 PF01272 Transcription elongation factor, GreA/GreB, C-term M0D44_06310 PF00923 Transaldolase/Fructose-6-phosphate aldolase M0D44_06320 PF01625 Peptide methionine sulfoxide reductase M0D44_06330 PF00196 Bacterial regulatory proteins, luxR family M0D44_06330 PF00072 Response regulator receiver domain M0D44_06335 PF00672 HAMP domain M0D44_06335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_06335 PF00512 His Kinase A (phospho-acceptor) domain M0D44_06335 PF01627 Hpt domain M0D44_06335 PF00072 Response regulator receiver domain M0D44_06335 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M0D44_06340 PF00072 Response regulator receiver domain M0D44_06340 PF00990 Diguanylate cyclase, GGDEF domain M0D44_06355 PF00749 tRNA synthetases class I (E and Q), catalytic domain M0D44_06355 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain M0D44_06360 PF00892 EamA-like transporter family M0D44_06375 PF01728 FtsJ-like methyltransferase M0D44_06375 PF18125 RlmM ferredoxin-like domain M0D44_06380 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M0D44_06380 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M0D44_06405 PF00378 Enoyl-CoA hydratase/isomerase M0D44_06410 PF00171 Aldehyde dehydrogenase family M0D44_06415 PF00501 AMP-binding enzyme M0D44_06415 PF13193 AMP-binding enzyme C-terminal domain M0D44_06420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D44_06420 PF03466 LysR substrate binding domain M0D44_06425 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase M0D44_06425 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit M0D44_06430 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase M0D44_06435 PF00392 Bacterial regulatory proteins, gntR family M0D44_06435 PF07729 FCD domain M0D44_06450 PF12697 Alpha/beta hydrolase family M0D44_06455 PF01494 FAD binding domain M0D44_06460 PF01494 FAD binding domain M0D44_06475 PF01923 Cobalamin adenosyltransferase M0D44_06480 PF00850 Histone deacetylase domain M0D44_06485 PF03968 OstA-like protein M0D44_06485 PF04453 LPS transport system D M0D44_06490 PF00639 PPIC-type PPIASE domain M0D44_06490 PF09312 SurA N-terminal domain M0D44_06495 PF04166 Pyridoxal phosphate biosynthetic protein PdxA M0D44_06500 PF00398 Ribosomal RNA adenine dimethylase M0D44_06505 PF04379 ApaG domain M0D44_06510 PF00149 Calcineurin-like phosphoesterase M0D44_06515 PF00186 Dihydrofolate reductase M0D44_06525 PF00303 Thymidylate synthase M0D44_06530 PF01790 Prolipoprotein diacylglyceryl transferase M0D44_06550 PF01219 Prokaryotic diacylglycerol kinase M0D44_06560 PF08521 Two-component sensor kinase N-terminal M0D44_06560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_06560 PF00512 His Kinase A (phospho-acceptor) domain M0D44_06565 PF00072 Response regulator receiver domain M0D44_06565 PF00486 Transcriptional regulatory protein, C terminal M0D44_06570 PF13472 GDSL-like Lipase/Acylhydrolase family M0D44_06575 PF00005 ABC transporter M0D44_06585 PF02668 Taurine catabolism dioxygenase TauD, TfdA family M0D44_06595 PF00005 ABC transporter M0D44_06600 PF00528 Binding-protein-dependent transport system inner membrane component M0D44_06620 PF00593 TonB dependent receptor M0D44_06620 PF07715 TonB-dependent Receptor Plug Domain M0D44_06630 PF00248 Aldo/keto reductase family M0D44_06635 PF07670 Nucleoside recognition M0D44_06635 PF07662 Na+ dependent nucleoside transporter C-terminus M0D44_06635 PF01773 Na+ dependent nucleoside transporter N-terminus M0D44_06640 PF00294 pfkB family carbohydrate kinase M0D44_06655 PF01207 Dihydrouridine synthase (Dus) M0D44_06660 PF13649 Methyltransferase domain M0D44_06670 PF00438 S-adenosylmethionine synthetase, N-terminal domain M0D44_06670 PF02772 S-adenosylmethionine synthetase, central domain M0D44_06670 PF02773 S-adenosylmethionine synthetase, C-terminal domain M0D44_06675 PF00328 Histidine phosphatase superfamily (branch 2) M0D44_06710 PF00311 Phosphoenolpyruvate carboxylase M0D44_06720 PF05221 S-adenosyl-L-homocysteine hydrolase M0D44_06720 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain M0D44_06725 PF13649 Methyltransferase domain M0D44_06735 PF00685 Sulfotransferase domain M0D44_06765 PF00128 Alpha amylase, catalytic domain M0D44_06770 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M0D44_06780 PF09286 Pro-kumamolisin, activation domain M0D44_06780 PF00082 Subtilase family M0D44_06785 PF00698 Acyl transferase domain M0D44_06785 PF02801 Beta-ketoacyl synthase, C-terminal domain M0D44_06785 PF00550 Phosphopantetheine attachment site M0D44_06785 PF08659 KR domain M0D44_06785 PF00109 Beta-ketoacyl synthase, N-terminal domain M0D44_06785 PF14765 Polyketide synthase dehydratase M0D44_06785 PF16197 Ketoacyl-synthetase C-terminal extension M0D44_06785 PF00107 Zinc-binding dehydrogenase M0D44_06785 PF08240 Alcohol dehydrogenase GroES-like domain M0D44_06795 PF02219 Methylenetetrahydrofolate reductase M0D44_06805 PF00293 NUDIX domain M0D44_06815 PF01043 SecA preprotein cross-linking domain M0D44_06815 PF02810 SEC-C motif M0D44_06815 PF07517 SecA DEAD-like domain M0D44_06815 PF07516 SecA Wing and Scaffold domain M0D44_06820 PF01551 Peptidase family M23 M0D44_06820 PF01476 LysM domain M0D44_06820 PF08525 Opacity-associated protein A N-terminal motif M0D44_06830 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase M0D44_06835 PF00091 Tubulin/FtsZ family, GTPase domain M0D44_06835 PF12327 FtsZ family, C-terminal domain M0D44_06840 PF02491 SHS2 domain inserted in FTSA M0D44_06845 PF08478 POTRA domain, FtsQ-type M0D44_06845 PF03799 Cell division protein FtsQ M0D44_06850 PF01820 D-ala D-ala ligase N-terminus M0D44_06850 PF07478 D-ala D-ala ligase C-terminus M0D44_06855 PF08245 Mur ligase middle domain M0D44_06855 PF02875 Mur ligase family, glutamate ligase domain M0D44_06855 PF01225 Mur ligase family, catalytic domain M0D44_06860 PF03033 Glycosyltransferase family 28 N-terminal domain M0D44_06860 PF04101 Glycosyltransferase family 28 C-terminal domain M0D44_06865 PF01098 Cell cycle protein M0D44_06870 PF00953 Glycosyl transferase family 4 M0D44_06875 PF08245 Mur ligase middle domain M0D44_06875 PF02875 Mur ligase family, glutamate ligase domain M0D44_06875 PF01225 Mur ligase family, catalytic domain M0D44_06880 PF08245 Mur ligase middle domain M0D44_06880 PF02875 Mur ligase family, glutamate ligase domain M0D44_06880 PF01225 Mur ligase family, catalytic domain M0D44_06885 PF00905 Penicillin binding protein transpeptidase domain M0D44_06885 PF03717 Penicillin-binding Protein dimerisation domain M0D44_06890 PF04999 Cell division protein FtsL M0D44_06895 PF01795 MraW methylase family M0D44_06900 PF02381 MraZ protein, putative antitoxin-like M0D44_06925 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M0D44_06935 PF02021 Uncharacterised protein family UPF0102 M0D44_06940 PF04307 LexA-binding, inner membrane-associated putative hydrolase M0D44_06945 PF02913 FAD linked oxidases, C-terminal domain M0D44_06945 PF01565 FAD binding domain M0D44_06960 PF00486 Transcriptional regulatory protein, C terminal M0D44_06960 PF00072 Response regulator receiver domain M0D44_06965 PF02702 Osmosensitive K+ channel His kinase sensor domain M0D44_06965 PF00512 His Kinase A (phospho-acceptor) domain M0D44_06965 PF13493 Domain of unknown function (DUF4118) M0D44_06965 PF13492 GAF domain M0D44_06965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_06970 PF02669 K+-transporting ATPase, c chain M0D44_06980 PF03814 Potassium-transporting ATPase A subunit M0D44_07000 PF02769 AIR synthase related protein, C-terminal domain M0D44_07000 PF00586 AIR synthase related protein, N-terminal domain M0D44_07005 PF01029 NusB family M0D44_07010 PF00885 6,7-dimethyl-8-ribityllumazine synthase M0D44_07015 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M0D44_07015 PF00925 GTP cyclohydrolase II M0D44_07020 PF00677 Lumazine binding domain M0D44_07030 PF01872 RibD C-terminal domain M0D44_07030 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M0D44_07040 PF03477 ATP cone domain M0D44_07045 PF00464 Serine hydroxymethyltransferase M0D44_07060 PF00005 ABC transporter M0D44_07060 PF12848 ABC transporter M0D44_07065 PF01327 Polypeptide deformylase M0D44_07075 PF03960 ArsC family M0D44_07090 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain M0D44_07090 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family M0D44_07125 PF07715 TonB-dependent Receptor Plug Domain M0D44_07125 PF00593 TonB dependent receptor M0D44_07135 PF00392 Bacterial regulatory proteins, gntR family M0D44_07135 PF07702 UTRA domain M0D44_07145 PF00263 Bacterial type II and III secretion system protein M0D44_07145 PF03958 Bacterial type II/III secretion system short domain M0D44_07155 PF10741 Type II secretion system (T2SS), protein M subtype b M0D44_07160 PF05137 Fimbrial assembly protein (PilN) M0D44_07165 PF03934 Type II secretion system (T2SS), protein K M0D44_07175 PF07963 Prokaryotic N-terminal methylation motif M0D44_07180 PF12019 Type II transport protein GspH M0D44_07185 PF08334 Type II secretion system (T2SS), protein G M0D44_07190 PF00482 Type II secretion system (T2SS), protein F M0D44_07195 PF00437 Type II/IV secretion system protein M0D44_07195 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M0D44_07200 PF04151 Bacterial pre-peptidase C-terminal domain M0D44_07200 PF00082 Subtilase family M0D44_07205 PF05658 Head domain of trimeric autotransporter adhesin M0D44_07205 PF05662 Coiled stalk of trimeric autotransporter adhesin M0D44_07205 PF13018 Extended Signal Peptide of Type V secretion system M0D44_07205 PF03895 YadA-like membrane anchor domain M0D44_07220 PF13098 Thioredoxin-like domain M0D44_07220 PF10411 Disulfide bond isomerase protein N-terminus M0D44_07225 PF00589 Phage integrase family M0D44_07225 PF02899 Phage integrase, N-terminal SAM-like domain M0D44_07245 PF03739 Lipopolysaccharide export system permease LptF/LptG M0D44_07255 PF02789 Cytosol aminopeptidase family, N-terminal domain M0D44_07255 PF00883 Cytosol aminopeptidase family, catalytic domain M0D44_07270 PF08264 Anticodon-binding domain of tRNA M0D44_07270 PF00133 tRNA synthetases class I (I, L, M and V) M0D44_07270 PF10458 Valyl tRNA synthetase tRNA binding arm M0D44_07275 PF00593 TonB dependent receptor M0D44_07275 PF07715 TonB-dependent Receptor Plug Domain M0D44_07280 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain M0D44_07280 PF01464 Transglycosylase SLT domain M0D44_07285 PF01966 HD domain M0D44_07285 PF01743 Poly A polymerase head domain M0D44_07285 PF12627 Probable RNA and SrmB- binding site of polymerase A M0D44_07300 PF14883 Hypothetical glycosyl hydrolase family 13 M0D44_07300 PF01522 Polysaccharide deacetylase M0D44_07305 PF00535 Glycosyl transferase family 2 M0D44_07320 PF01979 Amidohydrolase family M0D44_07325 PF01380 SIS domain M0D44_07330 PF00356 Bacterial regulatory proteins, lacI family M0D44_07335 PF07690 Major Facilitator Superfamily M0D44_07340 PF00392 Bacterial regulatory proteins, gntR family M0D44_07340 PF07702 UTRA domain M0D44_07355 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 M0D44_07355 PF16355 Domain of unknown function (DUF4982) M0D44_07355 PF02836 Glycosyl hydrolases family 2, TIM barrel domain M0D44_07355 PF02837 Glycosyl hydrolases family 2, sugar binding domain M0D44_07355 PF00703 Glycosyl hydrolases family 2 M0D44_07380 PF03934 Type II secretion system (T2SS), protein K M0D44_07385 PF07963 Prokaryotic N-terminal methylation motif M0D44_07385 PF11612 Type II secretion system (T2SS), protein J M0D44_07390 PF07963 Prokaryotic N-terminal methylation motif M0D44_07390 PF02501 Type II secretion system (T2SS), protein I M0D44_07395 PF12019 Type II transport protein GspH M0D44_07395 PF07963 Prokaryotic N-terminal methylation motif M0D44_07400 PF07963 Prokaryotic N-terminal methylation motif M0D44_07400 PF08334 Type II secretion system (T2SS), protein G M0D44_07405 PF00482 Type II secretion system (T2SS), protein F M0D44_07410 PF00437 Type II/IV secretion system protein M0D44_07415 PF03958 Bacterial type II/III secretion system short domain M0D44_07415 PF00263 Bacterial type II and III secretion system protein M0D44_07455 PF00106 short chain dehydrogenase M0D44_07460 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) M0D44_07465 PF00512 His Kinase A (phospho-acceptor) domain M0D44_07465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_07470 PF00072 Response regulator receiver domain M0D44_07475 PF00512 His Kinase A (phospho-acceptor) domain M0D44_07475 PF08446 PAS fold M0D44_07475 PF00360 Phytochrome region M0D44_07475 PF01590 GAF domain M0D44_07475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_07480 PF04972 BON domain M0D44_07485 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M0D44_07485 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M0D44_07490 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M0D44_07490 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain M0D44_07525 PF01467 Cytidylyltransferase-like M0D44_07525 PF00293 NUDIX domain M0D44_07535 PF03466 LysR substrate binding domain M0D44_07535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D44_07545 PF11818 C-terminal domain of tail specific protease (DUF3340) M0D44_07545 PF17804 Tail specific protease N-terminal domain M0D44_07545 PF03572 Peptidase family S41 M0D44_07545 PF00595 PDZ domain M0D44_07550 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family M0D44_07550 PF04055 Radical SAM superfamily M0D44_07555 PF03099 Biotin/lipoate A/B protein ligase family M0D44_07560 PF04359 Protein of unknown function (DUF493) M0D44_07570 PF07943 Penicillin-binding protein 5, C-terminal domain M0D44_07570 PF00768 D-alanyl-D-alanine carboxypeptidase M0D44_07575 PF03330 Lytic transglycolase M0D44_07575 PF05036 Sporulation related domain M0D44_07580 PF13406 Transglycosylase SLT domain M0D44_07585 PF00295 Glycosyl hydrolases family 28 M0D44_07595 PF01098 Cell cycle protein M0D44_07600 PF00905 Penicillin binding protein transpeptidase domain M0D44_07600 PF03717 Penicillin-binding Protein dimerisation domain M0D44_07610 PF04085 rod shape-determining protein MreC M0D44_07625 PF00294 pfkB family carbohydrate kinase M0D44_07640 PF02954 Bacterial regulatory protein, Fis family M0D44_07640 PF00158 Sigma-54 interaction domain M0D44_07640 PF01590 GAF domain M0D44_07650 PF08240 Alcohol dehydrogenase GroES-like domain M0D44_07650 PF00107 Zinc-binding dehydrogenase M0D44_07665 PF00497 Bacterial extracellular solute-binding proteins, family 3 M0D44_07670 PF13360 PQQ-like domain M0D44_07685 PF11838 ERAP1-like C-terminal domain M0D44_07685 PF01433 Peptidase family M1 domain M0D44_07690 PF00563 EAL domain M0D44_07690 PF03707 Bacterial signalling protein N terminal repeat M0D44_07690 PF00990 Diguanylate cyclase, GGDEF domain M0D44_07695 PF01209 ubiE/COQ5 methyltransferase family M0D44_07705 PF13533 Biotin-lipoyl like M0D44_07710 PF13673 Acetyltransferase (GNAT) domain M0D44_07720 PF00004 ATPase family associated with various cellular activities (AAA) M0D44_07720 PF07724 AAA domain (Cdc48 subfamily) M0D44_07720 PF10431 C-terminal, D2-small domain, of ClpB protein M0D44_07725 PF00227 Proteasome subunit M0D44_07730 PF02899 Phage integrase, N-terminal SAM-like domain M0D44_07730 PF00589 Phage integrase family M0D44_07740 PF01678 Diaminopimelate epimerase M0D44_07750 PF04304 Protein of unknown function (DUF454) M0D44_07760 PF00155 Aminotransferase class I and II M0D44_07775 PF00326 Prolyl oligopeptidase family M0D44_07775 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain M0D44_07800 PF03900 Porphobilinogen deaminase, C-terminal domain M0D44_07800 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain M0D44_07805 PF04397 LytTr DNA-binding domain M0D44_07805 PF00072 Response regulator receiver domain M0D44_07810 PF07694 5TMR of 5TMR-LYT M0D44_07810 PF06580 Histidine kinase M0D44_07820 PF13632 Glycosyl transferase family group 2 M0D44_07830 PF00990 Diguanylate cyclase, GGDEF domain M0D44_07835 PF00916 Sulfate permease family M0D44_07835 PF01740 STAS domain M0D44_07840 PF00553 Cellulose binding domain M0D44_07840 PF00150 Cellulase (glycosyl hydrolase family 5) M0D44_07845 PF00672 HAMP domain M0D44_07845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D44_07845 PF02203 Tar ligand binding domain homologue M0D44_07860 PF00563 EAL domain M0D44_07860 PF03707 Bacterial signalling protein N terminal repeat M0D44_07860 PF00990 Diguanylate cyclase, GGDEF domain M0D44_07895 PF01204 Trehalase M0D44_07910 PF01544 CorA-like Mg2+ transporter protein M0D44_07920 PF00324 Amino acid permease M0D44_07930 PF00553 Cellulose binding domain M0D44_07930 PF01341 Glycosyl hydrolases family 6 M0D44_07930 PF00041 Fibronectin type III domain M0D44_07935 PF03330 Lytic transglycolase M0D44_07940 PF00892 EamA-like transporter family M0D44_07960 PF00990 Diguanylate cyclase, GGDEF domain M0D44_07965 PF07759 Protein of unknown function (DUF1615) M0D44_08005 PF13409 Glutathione S-transferase, N-terminal domain M0D44_08015 PF00106 short chain dehydrogenase M0D44_08060 PF13361 UvrD-like helicase C-terminal domain M0D44_08060 PF00580 UvrD/REP helicase N-terminal domain M0D44_08105 PF00665 Integrase core domain M0D44_08105 PF13276 HTH-like domain M0D44_08105 PF13333 Integrase core domain M0D44_08110 PF01527 Transposase M0D44_08115 PF02374 Anion-transporting ATPase M0D44_08125 PF17831 Pyruvate dehydrogenase E1 component middle domain M0D44_08125 PF00456 Transketolase, thiamine diphosphate binding domain M0D44_08130 PF07745 Glycosyl hydrolase family 53 M0D44_08165 PF07729 FCD domain M0D44_08165 PF00392 Bacterial regulatory proteins, gntR family M0D44_08175 PF00698 Acyl transferase domain M0D44_08180 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase M0D44_08185 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG M0D44_08195 PF01039 Carboxyl transferase domain M0D44_08200 PF06857 Malonate decarboxylase delta subunit (MdcD) M0D44_08205 PF16957 Malonate decarboxylase, alpha subunit, transporter M0D44_08210 PF03551 Transcriptional regulator PadR-like family M0D44_08210 PF13847 Methyltransferase domain M0D44_08235 PF12680 SnoaL-like domain M0D44_08235 PF08281 Sigma-70, region 4 M0D44_08235 PF04542 Sigma-70 region 2 M0D44_08240 PF04264 YceI-like domain M0D44_08245 PF00881 Nitroreductase family M0D44_08270 PF02592 Putative vitamin uptake transporter M0D44_08275 PF03710 Glutamate-ammonia ligase adenylyltransferase M0D44_08275 PF08335 GlnD PII-uridylyltransferase M0D44_08285 PF08450 SMP-30/Gluconolactonase/LRE-like region M0D44_08300 PF00793 DAHP synthetase I family M0D44_08310 PF07715 TonB-dependent Receptor Plug Domain M0D44_08310 PF00593 TonB dependent receptor M0D44_08315 PF01609 Transposase DDE domain M0D44_08315 PF05598 Transposase domain (DUF772) M0D44_08350 PF00118 TCP-1/cpn60 chaperonin family M0D44_08355 PF00166 Chaperonin 10 Kd subunit M0D44_08360 PF04231 Endonuclease I M0D44_08365 PF03091 CutA1 divalent ion tolerance protein M0D44_08370 PF02683 Cytochrome C biogenesis protein transmembrane region M0D44_08370 PF11412 Disulphide bond corrector protein DsbC M0D44_08375 PF00326 Prolyl oligopeptidase family M0D44_08375 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain M0D44_08380 PF01220 Dehydroquinase class II M0D44_08385 PF00364 Biotin-requiring enzyme M0D44_08395 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M0D44_08395 PF00289 Biotin carboxylase, N-terminal domain M0D44_08395 PF02785 Biotin carboxylase C-terminal domain M0D44_08430 PF01381 Helix-turn-helix M0D44_08440 PF02954 Bacterial regulatory protein, Fis family M0D44_08445 PF00818 Ice nucleation protein repeat M0D44_08445 PF00818 Ice nucleation protein repeat M0D44_08455 PF02142 MGS-like domain M0D44_08455 PF01808 AICARFT/IMPCHase bienzyme M0D44_08460 PF02844 Phosphoribosylglycinamide synthetase, N domain M0D44_08460 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain M0D44_08460 PF02843 Phosphoribosylglycinamide synthetase, C domain M0D44_08465 PF12805 FUSC-like inner membrane protein yccS M0D44_08470 PF07690 Major Facilitator Superfamily M0D44_08475 PF03466 LysR substrate binding domain M0D44_08475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D44_08480 PF07690 Major Facilitator Superfamily M0D44_08495 PF03186 CobD/Cbib protein M0D44_08495 PF17113 Regulatory signalling modulator protein AmpE M0D44_08500 PF00293 NUDIX domain M0D44_08500 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain M0D44_08500 PF09297 NADH pyrophosphatase zinc ribbon domain M0D44_08510 PF01521 Iron-sulphur cluster biosynthesis M0D44_08530 PF00563 EAL domain M0D44_08530 PF00990 Diguanylate cyclase, GGDEF domain M0D44_08530 PF03707 Bacterial signalling protein N terminal repeat M0D44_08535 PF00672 HAMP domain M0D44_08535 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M0D44_08535 PF01627 Hpt domain M0D44_08535 PF00512 His Kinase A (phospho-acceptor) domain M0D44_08535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_08535 PF00072 Response regulator receiver domain M0D44_08540 PF00210 Ferritin-like domain M0D44_08550 PF00293 NUDIX domain M0D44_08565 PF00380 Ribosomal protein S9/S16 M0D44_08570 PF00572 Ribosomal protein L13 M0D44_08575 PF03232 Ubiquinone biosynthesis protein COQ7 M0D44_08580 PF00893 Small Multidrug Resistance protein M0D44_08585 PF02675 S-adenosylmethionine decarboxylase M0D44_08590 PF00325 Bacterial regulatory proteins, crp family M0D44_08590 PF00027 Cyclic nucleotide-binding domain M0D44_08600 PF00218 Indole-3-glycerol phosphate synthase M0D44_08605 PF02885 Glycosyl transferase family, helical bundle domain M0D44_08605 PF00591 Glycosyl transferase family, a/b domain M0D44_08615 PF00117 Glutamine amidotransferase class-I M0D44_08630 PF04715 Anthranilate synthase component I, N terminal region M0D44_08630 PF00425 chorismate binding enzyme M0D44_08635 PF00781 Diacylglycerol kinase catalytic domain M0D44_08640 PF00583 Acetyltransferase (GNAT) family M0D44_08645 PF00834 Ribulose-phosphate 3 epimerase family M0D44_08655 PF00226 DnaJ domain M0D44_08655 PF05099 Tellurite resistance protein TerB M0D44_08660 PF01259 SAICAR synthetase M0D44_08675 PF01447 Thermolysin metallopeptidase, catalytic domain M0D44_08675 PF07504 Fungalysin/Thermolysin Propeptide Motif M0D44_08675 PF01483 Proprotein convertase P-domain M0D44_08675 PF02868 Thermolysin metallopeptidase, alpha-helical domain M0D44_08695 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M0D44_08695 PF00361 Proton-conducting membrane transporter M0D44_08695 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter M0D44_08695 PF13244 Domain of unknown function (DUF4040) M0D44_08700 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L M0D44_08705 PF00361 Proton-conducting membrane transporter M0D44_08715 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) M0D44_08720 PF03334 Na+/H+ antiporter subunit M0D44_08740 PF04209 homogentisate 1,2-dioxygenase M0D44_08745 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M0D44_08750 PF01047 MarR family M0D44_08760 PF00854 POT family M0D44_08765 PF03301 Tryptophan 2,3-dioxygenase M0D44_08775 PF00676 Dehydrogenase E1 component M0D44_08780 PF02780 Transketolase, C-terminal domain M0D44_08780 PF02779 Transketolase, pyrimidine binding domain M0D44_08790 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M0D44_08790 PF02817 e3 binding domain M0D44_08790 PF00364 Biotin-requiring enzyme M0D44_08800 PF00271 Helicase conserved C-terminal domain M0D44_08800 PF00270 DEAD/DEAH box helicase M0D44_08810 PF06903 VirK protein M0D44_08835 PF13460 NAD(P)H-binding M0D44_08840 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) M0D44_08840 PF00128 Alpha amylase, catalytic domain M0D44_08850 PF00128 Alpha amylase, catalytic domain M0D44_08855 PF02446 4-alpha-glucanotransferase M0D44_08860 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) M0D44_08860 PF11941 Domain of unknown function (DUF3459) M0D44_08860 PF00128 Alpha amylase, catalytic domain M0D44_08865 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) M0D44_08865 PF02806 Alpha amylase, C-terminal all-beta domain M0D44_08865 PF00128 Alpha amylase, catalytic domain M0D44_08870 PF00534 Glycosyl transferases group 1 M0D44_08870 PF08323 Starch synthase catalytic domain M0D44_08875 PF00990 Diguanylate cyclase, GGDEF domain M0D44_08880 PF02638 Glycosyl hydrolase-like 10 M0D44_08885 PF05661 Protein of unknown function (DUF808) M0D44_08890 PF03109 ABC1 family M0D44_08895 PF00884 Sulfatase M0D44_08900 PF12794 Mechanosensitive ion channel inner membrane domain 1 M0D44_08900 PF12795 Mechanosensitive ion channel porin domain M0D44_08900 PF00924 Mechanosensitive ion channel M0D44_08920 PF01464 Transglycosylase SLT domain M0D44_08930 PF03958 Bacterial type II/III secretion system short domain M0D44_08930 PF00263 Bacterial type II and III secretion system protein M0D44_08935 PF01311 Bacterial export proteins, family 1 M0D44_08945 PF18269 T3SS EscN ATPase C-terminal domain M0D44_08945 PF02874 ATP synthase alpha/beta family, beta-barrel domain M0D44_08945 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M0D44_08960 PF01514 Secretory protein of YscJ/FliF family M0D44_08975 PF01312 FlhB HrpN YscU SpaS Family M0D44_08980 PF00771 FHIPEP family M0D44_08995 PF00813 FliP family M0D44_09000 PF01313 Bacterial export proteins, family 3 M0D44_09040 PF05819 NolX protein M0D44_09055 PF01040 UbiA prenyltransferase family M0D44_09065 PF04055 Radical SAM superfamily M0D44_09065 PF06968 Biotin and Thiamin Synthesis associated domain M0D44_09070 PF00155 Aminotransferase class I and II M0D44_09080 PF12697 Alpha/beta hydrolase family M0D44_09090 PF13649 Methyltransferase domain M0D44_09110 PF00291 Pyridoxal-phosphate dependent enzyme M0D44_09125 PF13932 GidA associated domain M0D44_09125 PF01134 Glucose inhibited division protein A M0D44_09135 PF07859 alpha/beta hydrolase fold M0D44_09145 PF09339 IclR helix-turn-helix domain M0D44_09145 PF01614 Bacterial transcriptional regulator M0D44_09160 PF02627 Carboxymuconolactone decarboxylase family M0D44_09165 PF12146 Serine aminopeptidase, S33 M0D44_09170 PF00206 Lyase M0D44_09170 PF10397 Adenylosuccinate lyase C-terminus M0D44_09180 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal M0D44_09180 PF00775 Dioxygenase M0D44_09185 PF00108 Thiolase, N-terminal domain M0D44_09185 PF02803 Thiolase, C-terminal domain M0D44_09190 PF01144 Coenzyme A transferase M0D44_09195 PF01144 Coenzyme A transferase M0D44_09200 PF00355 Rieske [2Fe-2S] domain M0D44_09205 PF00970 Oxidoreductase FAD-binding domain M0D44_09205 PF00111 2Fe-2S iron-sulfur cluster binding domain M0D44_09215 PF08220 DeoR-like helix-turn-helix domain M0D44_09215 PF00455 DeoR C terminal sensor domain M0D44_09220 PF01266 FAD dependent oxidoreductase M0D44_09220 PF16901 C-terminal domain of alpha-glycerophosphate oxidase M0D44_09225 PF00230 Major intrinsic protein M0D44_09230 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M0D44_09230 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M0D44_09240 PF01494 FAD binding domain M0D44_09250 PF00171 Aldehyde dehydrogenase family M0D44_09270 PF01966 HD domain M0D44_09270 PF11871 Domain of unknown function (DUF3391) M0D44_09275 PF07690 Major Facilitator Superfamily M0D44_09285 PF00132 Bacterial transferase hexapeptide (six repeats) M0D44_09290 PF03692 Putative zinc- or iron-chelating domain M0D44_09295 PF00920 Dehydratase family M0D44_09300 PF00589 Phage integrase family M0D44_09300 PF13495 Phage integrase, N-terminal SAM-like domain M0D44_09340 PF01638 HxlR-like helix-turn-helix M0D44_09345 PF05368 NmrA-like family M0D44_09355 PF03812 2-keto-3-deoxygluconate permease M0D44_09360 PF01717 Cobalamin-independent synthase, Catalytic domain M0D44_09360 PF08267 Cobalamin-independent synthase, N-terminal domain M0D44_09370 PF03358 NADPH-dependent FMN reductase M0D44_09375 PF03466 LysR substrate binding domain M0D44_09375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D44_09380 PF02677 Epoxyqueuosine reductase QueH M0D44_09415 PF00551 Formyl transferase M0D44_09430 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M0D44_09430 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M0D44_09435 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M0D44_09440 PF02146 Sir2 family M0D44_09445 PF00561 alpha/beta hydrolase fold M0D44_09460 PF07690 Major Facilitator Superfamily M0D44_09465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D44_09465 PF03466 LysR substrate binding domain M0D44_09470 PF01026 TatD related DNase M0D44_09475 PF03466 LysR substrate binding domain M0D44_09475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D44_09480 PF00355 Rieske [2Fe-2S] domain M0D44_09485 PF00175 Oxidoreductase NAD-binding domain M0D44_09485 PF00111 2Fe-2S iron-sulfur cluster binding domain M0D44_09490 PF00860 Permease family M0D44_09500 PF01156 Inosine-uridine preferring nucleoside hydrolase M0D44_09510 PF01425 Amidase M0D44_09535 PF00561 alpha/beta hydrolase fold M0D44_09540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D44_09540 PF03466 LysR substrate binding domain M0D44_09545 PF07687 Peptidase dimerisation domain M0D44_09545 PF01546 Peptidase family M20/M25/M40 M0D44_09550 PF00266 Aminotransferase class-V M0D44_09565 PF01014 Uricase M0D44_09565 PF09349 OHCU decarboxylase M0D44_09570 PF13454 FAD-NAD(P)-binding M0D44_09575 PF00576 HIUase/Transthyretin family M0D44_09580 PF07308 Protein of unknown function (DUF1456) M0D44_09590 PF00270 DEAD/DEAH box helicase M0D44_09590 PF04408 Helicase associated domain (HA2) M0D44_09590 PF00271 Helicase conserved C-terminal domain M0D44_09590 PF08482 ATP-dependent helicase C-terminal M0D44_09600 PF00849 RNA pseudouridylate synthase M0D44_09610 PF00248 Aldo/keto reductase family M0D44_09615 PF16884 N-terminal domain of oxidoreductase M0D44_09615 PF00107 Zinc-binding dehydrogenase M0D44_09620 PF00248 Aldo/keto reductase family M0D44_09640 PF02566 OsmC-like protein M0D44_09645 PF01047 MarR family M0D44_09650 PF03969 AFG1-like ATPase M0D44_09670 PF02492 CobW/HypB/UreG, nucleotide-binding domain M0D44_09670 PF07683 Cobalamin synthesis protein cobW C-terminal domain M0D44_09725 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M0D44_09725 PF02770 Acyl-CoA dehydrogenase, middle domain M0D44_09725 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M0D44_09730 PF01039 Carboxyl transferase domain M0D44_09735 PF02785 Biotin carboxylase C-terminal domain M0D44_09735 PF00289 Biotin carboxylase, N-terminal domain M0D44_09735 PF00364 Biotin-requiring enzyme M0D44_09735 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M0D44_09735 PF18140 Propionyl-coenzyme A carboxylase BT domain M0D44_09740 PF00326 Prolyl oligopeptidase family M0D44_09760 PF00990 Diguanylate cyclase, GGDEF domain M0D44_09765 PF00463 Isocitrate lyase family M0D44_09770 PF01274 Malate synthase M0D44_09775 PF03466 LysR substrate binding domain M0D44_09775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D44_09780 PF00999 Sodium/hydrogen exchanger family M0D44_09800 PF12706 Beta-lactamase superfamily domain M0D44_09810 PF10502 Signal peptidase, peptidase S26 M0D44_09815 PF01432 Peptidase family M3 M0D44_09820 PF01112 Asparaginase M0D44_09830 PF00472 RF-1 domain M0D44_09840 PF00849 RNA pseudouridylate synthase M0D44_09855 PF03109 ABC1 family M0D44_09865 PF01820 D-ala D-ala ligase N-terminus M0D44_09865 PF07478 D-ala D-ala ligase C-terminus M0D44_09875 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family M0D44_09880 PF00501 AMP-binding enzyme M0D44_09885 PF03692 Putative zinc- or iron-chelating domain M0D44_09890 PF00561 alpha/beta hydrolase fold M0D44_09895 PF02661 Fic/DOC family M0D44_09895 PF13784 Fic/DOC family N-terminal M0D44_09900 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M0D44_09900 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M0D44_09915 PF00588 SpoU rRNA Methylase family M0D44_09920 PF07690 Major Facilitator Superfamily M0D44_09935 PF00072 Response regulator receiver domain M0D44_09935 PF00158 Sigma-54 interaction domain M0D44_09935 PF02954 Bacterial regulatory protein, Fis family M0D44_09940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_09945 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M0D44_09945 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M0D44_09945 PF00205 Thiamine pyrophosphate enzyme, central domain M0D44_09955 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus M0D44_09955 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus M0D44_09960 PF02556 Preprotein translocase subunit SecB M0D44_09965 PF00581 Rhodanese-like domain M0D44_10005 PF02803 Thiolase, C-terminal domain M0D44_10005 PF00108 Thiolase, N-terminal domain M0D44_10015 PF03544 Gram-negative bacterial TonB protein C-terminal M0D44_10020 PF00080 Copper/zinc superoxide dismutase (SODC) M0D44_10025 PF00080 Copper/zinc superoxide dismutase (SODC) M0D44_10030 PF00072 Response regulator receiver domain M0D44_10030 PF00158 Sigma-54 interaction domain M0D44_10030 PF02954 Bacterial regulatory protein, Fis family M0D44_10035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_10035 PF00512 His Kinase A (phospho-acceptor) domain M0D44_10035 PF00989 PAS fold M0D44_10040 PF00909 Ammonium Transporter Family M0D44_10045 PF00543 Nitrogen regulatory protein P-II M0D44_10050 PF03951 Glutamine synthetase, beta-Grasp domain M0D44_10050 PF00120 Glutamine synthetase, catalytic domain M0D44_10055 PF02673 Bacitracin resistance protein BacA M0D44_10065 PF08240 Alcohol dehydrogenase GroES-like domain M0D44_10065 PF00107 Zinc-binding dehydrogenase M0D44_10090 PF03061 Thioesterase superfamily M0D44_10095 PF13091 PLD-like domain M0D44_10110 PF01883 Iron-sulfur cluster assembly protein M0D44_10110 PF10609 NUBPL iron-transfer P-loop NTPase M0D44_10130 PF01381 Helix-turn-helix M0D44_10135 PF13657 HipA N-terminal domain M0D44_10135 PF07804 HipA-like C-terminal domain M0D44_10140 PF10017 Histidine-specific methyltransferase, SAM-dependent M0D44_10145 PF12867 DinB superfamily M0D44_10145 PF03781 Sulfatase-modifying factor enzyme 1 M0D44_10155 PF00528 Binding-protein-dependent transport system inner membrane component M0D44_10160 PF00571 CBS domain M0D44_10160 PF00005 ABC transporter M0D44_10175 PF00005 ABC transporter M0D44_10185 PF07687 Peptidase dimerisation domain M0D44_10185 PF01546 Peptidase family M20/M25/M40 M0D44_10190 PF01734 Patatin-like phospholipase M0D44_10195 PF07715 TonB-dependent Receptor Plug Domain M0D44_10195 PF07660 Secretin and TonB N terminus short domain M0D44_10195 PF00593 TonB dependent receptor M0D44_10200 PF01037 Lrp/AsnC ligand binding domain M0D44_10205 PF00351 Biopterin-dependent aromatic amino acid hydroxylase M0D44_10215 PF00657 GDSL-like Lipase/Acylhydrolase M0D44_10230 PF04962 KduI/IolB family M0D44_10235 PF00356 Bacterial regulatory proteins, lacI family M0D44_10240 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain M0D44_10240 PF04616 Glycosyl hydrolases family 43 M0D44_10245 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M0D44_10255 PF03480 Bacterial extracellular solute-binding protein, family 7 M0D44_10265 PF07859 alpha/beta hydrolase fold M0D44_10265 PF13472 GDSL-like Lipase/Acylhydrolase family M0D44_10270 PF00135 Carboxylesterase family M0D44_10275 PF13472 GDSL-like Lipase/Acylhydrolase family M0D44_10280 PF00248 Aldo/keto reductase family M0D44_10310 PF02806 Alpha amylase, C-terminal all-beta domain M0D44_10310 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) M0D44_10310 PF00128 Alpha amylase, catalytic domain M0D44_10315 PF00128 Alpha amylase, catalytic domain M0D44_10315 PF16657 Maltogenic Amylase, C-terminal domain M0D44_10320 PF00128 Alpha amylase, catalytic domain M0D44_10320 PF11896 Domain of unknown function (DUF3416) M0D44_10325 PF08479 POTRA domain, ShlB-type M0D44_10325 PF17287 POTRA domain M0D44_10325 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB M0D44_10330 PF04829 Pre-toxin domain with VENN motif M0D44_10330 PF05860 haemagglutination activity domain M0D44_10330 PF13018 Extended Signal Peptide of Type V secretion system M0D44_10330 PF13332 Hemagglutinin repeat M0D44_10340 PF04829 Pre-toxin domain with VENN motif M0D44_10340 PF13018 Extended Signal Peptide of Type V secretion system M0D44_10340 PF13332 Hemagglutinin repeat M0D44_10340 PF05860 haemagglutination activity domain M0D44_10350 PF13332 Hemagglutinin repeat M0D44_10350 PF05860 haemagglutination activity domain M0D44_10350 PF04829 Pre-toxin domain with VENN motif M0D44_10355 PF05860 haemagglutination activity domain M0D44_10355 PF04829 Pre-toxin domain with VENN motif M0D44_10355 PF13018 Extended Signal Peptide of Type V secretion system M0D44_10355 PF13332 Hemagglutinin repeat M0D44_10400 PF11798 IMS family HHH motif M0D44_10400 PF00817 impB/mucB/samB family M0D44_10400 PF11799 impB/mucB/samB family C-terminal domain M0D44_10400 PF13438 Domain of unknown function (DUF4113) M0D44_10440 PF00294 pfkB family carbohydrate kinase M0D44_10450 PF07055 Enoyl reductase FAD binding domain M0D44_10450 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase M0D44_10450 PF12241 Trans-2-enoyl-CoA reductase catalytic region M0D44_10455 PF18500 CadC C-terminal domain 1 M0D44_10455 PF00486 Transcriptional regulatory protein, C terminal M0D44_10475 PF00196 Bacterial regulatory proteins, luxR family M0D44_10475 PF00072 Response regulator receiver domain M0D44_10480 PF07730 Histidine kinase M0D44_10485 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family M0D44_10490 PF01070 FMN-dependent dehydrogenase M0D44_10495 PF02735 Ku70/Ku80 beta-barrel domain M0D44_10515 PF00171 Aldehyde dehydrogenase family M0D44_10520 PF07715 TonB-dependent Receptor Plug Domain M0D44_10520 PF00593 TonB dependent receptor M0D44_10525 PF00155 Aminotransferase class I and II M0D44_10530 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain M0D44_10580 PF17863 AAA lid domain M0D44_10580 PF07726 ATPase family associated with various cellular activities (AAA) M0D44_10620 PF08946 Osmosensory transporter coiled coil M0D44_10620 PF00083 Sugar (and other) transporter M0D44_10625 PF00085 Thioredoxin M0D44_10640 PF00293 NUDIX domain M0D44_10640 PF13344 Haloacid dehalogenase-like hydrolase M0D44_10650 PF02868 Thermolysin metallopeptidase, alpha-helical domain M0D44_10650 PF01447 Thermolysin metallopeptidase, catalytic domain M0D44_10650 PF16485 Protealysin propeptide M0D44_10670 PF00072 Response regulator receiver domain M0D44_10670 PF13188 PAS domain M0D44_10670 PF08448 PAS fold M0D44_10670 PF00512 His Kinase A (phospho-acceptor) domain M0D44_10670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_10680 PF00072 Response regulator receiver domain M0D44_10680 PF00196 Bacterial regulatory proteins, luxR family M0D44_10685 PF05532 CsbD-like M0D44_10695 PF00043 Glutathione S-transferase, C-terminal domain M0D44_10695 PF02798 Glutathione S-transferase, N-terminal domain M0D44_10705 PF03006 Haemolysin-III related M0D44_10710 PF00271 Helicase conserved C-terminal domain M0D44_10710 PF09369 Domain of unknown function (DUF1998) M0D44_10710 PF00270 DEAD/DEAH box helicase M0D44_10785 PF00685 Sulfotransferase domain M0D44_10790 PF02603 HPr Serine kinase N terminus M0D44_10790 PF07475 HPr Serine kinase C-terminal domain M0D44_10810 PF13537 Glutamine amidotransferase domain M0D44_10810 PF00733 Asparagine synthase M0D44_10820 PF00664 ABC transporter transmembrane region M0D44_10820 PF00005 ABC transporter M0D44_10835 PF16363 GDP-mannose 4,6 dehydratase M0D44_10850 PF00733 Asparagine synthase M0D44_10850 PF13537 Glutamine amidotransferase domain M0D44_10870 PF13439 Glycosyltransferase Family 4 M0D44_10870 PF00534 Glycosyl transferases group 1 M0D44_10875 PF03808 Glycosyl transferase WecB/TagA/CpsF family M0D44_10890 PF02350 UDP-N-acetylglucosamine 2-epimerase M0D44_10895 PF02397 Bacterial sugar transferase M0D44_10915 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain M0D44_10915 PF06165 Glycosyltransferase family 36 M0D44_10915 PF10091 Putative glucoamylase M0D44_10955 PF01645 Conserved region in glutamate synthase M0D44_10955 PF00310 Glutamine amidotransferases class-II M0D44_10955 PF04898 Glutamate synthase central domain M0D44_10955 PF01493 GXGXG motif M0D44_10960 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster M0D44_10960 PF07992 Pyridine nucleotide-disulphide oxidoreductase M0D44_10980 PF08240 Alcohol dehydrogenase GroES-like domain M0D44_10980 PF00107 Zinc-binding dehydrogenase M0D44_10985 PF00150 Cellulase (glycosyl hydrolase family 5) M0D44_10990 PF00150 Cellulase (glycosyl hydrolase family 5) M0D44_10995 PF00150 Cellulase (glycosyl hydrolase family 5) M0D44_11005 PF04389 Peptidase family M28 M0D44_11015 PF01551 Peptidase family M23 M0D44_11020 PF13180 PDZ domain M0D44_11020 PF03572 Peptidase family S41 M0D44_11025 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M0D44_11025 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M0D44_11025 PF01842 ACT domain M0D44_11040 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) M0D44_11050 PF04055 Radical SAM superfamily M0D44_11065 PF13396 Phospholipase_D-nuclease N-terminal M0D44_11065 PF13091 PLD-like domain M0D44_11075 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ M0D44_11085 PF02472 Biopolymer transport protein ExbD/TolR M0D44_11090 PF02472 Biopolymer transport protein ExbD/TolR M0D44_11095 PF01618 MotA/TolQ/ExbB proton channel family M0D44_11100 PF03544 Gram-negative bacterial TonB protein C-terminal M0D44_11110 PF01435 Peptidase family M48 M0D44_11120 PF01751 Toprim domain M0D44_11120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_11120 PF00986 DNA gyrase B subunit, carboxyl terminus M0D44_11120 PF00204 DNA gyrase B M0D44_11120 PF18053 DNA gyrase B subunit insert domain M0D44_11125 PF02463 RecF/RecN/SMC N terminal domain M0D44_11130 PF00712 DNA polymerase III beta subunit, N-terminal domain M0D44_11130 PF02767 DNA polymerase III beta subunit, central domain M0D44_11130 PF02768 DNA polymerase III beta subunit, C-terminal domain M0D44_11135 PF00308 Bacterial dnaA protein M0D44_11135 PF08299 Bacterial dnaA protein helix-turn-helix M0D44_11135 PF11638 DnaA N-terminal domain M0D44_11140 PF00468 Ribosomal protein L34 M0D44_11145 PF00825 Ribonuclease P M0D44_11150 PF14849 YidC periplasmic domain M0D44_11150 PF02096 60Kd inner membrane protein M0D44_11155 PF01522 Polysaccharide deacetylase M0D44_11160 PF12631 MnmE helical domain M0D44_11160 PF01926 50S ribosome-binding GTPase M0D44_11160 PF10396 GTP-binding protein TrmE N-terminus M0D44_11165 PF01569 PAP2 superfamily M0D44_11175 PF03009 Glycerophosphoryl diester phosphodiesterase family M0D44_11180 PF01694 Rhomboid family M0D44_11185 PF03741 Integral membrane protein TerC family M0D44_11190 PF17785 PUA-like domain M0D44_11190 PF10672 S-adenosylmethionine-dependent methyltransferase M0D44_11205 PF07690 Major Facilitator Superfamily M0D44_11210 PF02595 Glycerate kinase family M0D44_11215 PF05651 Putative sugar diacid recognition M0D44_11215 PF17853 GGDEF-like domain M0D44_11215 PF13556 PucR C-terminal helix-turn-helix domain M0D44_11220 PF08448 PAS fold M0D44_11220 PF00990 Diguanylate cyclase, GGDEF domain M0D44_11225 PF10947 Protein of unknown function (DUF2628) M0D44_11240 PF07971 Glycosyl hydrolase family 92 M0D44_11240 PF17678 Glycosyl hydrolase family 92 N-terminal domain M0D44_11245 PF13520 Amino acid permease M0D44_11265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D44_11265 PF03466 LysR substrate binding domain M0D44_11270 PF00107 Zinc-binding dehydrogenase M0D44_11270 PF08240 Alcohol dehydrogenase GroES-like domain M0D44_11275 PF02646 RmuC family M0D44_11285 PF00255 Glutathione peroxidase M0D44_11295 PF04333 MlaA lipoprotein M0D44_11305 PF05494 MlaC protein M0D44_11315 PF02405 Permease MlaE M0D44_11320 PF00005 ABC transporter M0D44_11325 PF17946 RecC C-terminal domain M0D44_11330 PF13361 UvrD-like helicase C-terminal domain M0D44_11330 PF12705 PD-(D/E)XK nuclease superfamily M0D44_11330 PF00580 UvrD/REP helicase N-terminal domain M0D44_11335 PF13538 UvrD-like helicase C-terminal domain M0D44_11375 PF00849 RNA pseudouridylate synthase M0D44_11420 PF13091 PLD-like domain M0D44_11420 PF13396 Phospholipase_D-nuclease N-terminal M0D44_11455 PF00083 Sugar (and other) transporter M0D44_11460 PF04632 Fusaric acid resistance protein family M0D44_11465 PF02321 Outer membrane efflux protein M0D44_11470 PF13533 Biotin-lipoyl like M0D44_11485 PF01227 GTP cyclohydrolase I M0D44_11505 PF01925 Sulfite exporter TauE/SafE M0D44_11510 PF02810 SEC-C motif M0D44_11520 PF01263 Aldose 1-epimerase M0D44_11525 PF07690 Major Facilitator Superfamily M0D44_11530 PF01126 Heme oxygenase M0D44_11535 PF00360 Phytochrome region M0D44_11535 PF13426 PAS domain M0D44_11535 PF08446 PAS fold M0D44_11535 PF01590 GAF domain M0D44_11540 PF03594 Benzoate membrane transport protein M0D44_11570 PF06827 Zinc finger found in FPG and IleRS M0D44_11570 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain M0D44_11570 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain M0D44_11580 PF04349 Periplasmic glucan biosynthesis protein, MdoG M0D44_11585 PF00360 Phytochrome region M0D44_11585 PF08446 PAS fold M0D44_11585 PF00512 His Kinase A (phospho-acceptor) domain M0D44_11585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_11585 PF01590 GAF domain M0D44_11590 PF00265 Thymidine kinase M0D44_11595 PF00580 UvrD/REP helicase N-terminal domain M0D44_11595 PF13361 UvrD-like helicase C-terminal domain M0D44_11610 PF04337 Protein of unknown function, DUF480 M0D44_11615 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) M0D44_11620 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family M0D44_11625 PF04820 Tryptophan halogenase M0D44_11640 PF00356 Bacterial regulatory proteins, lacI family M0D44_11650 PF01553 Acyltransferase M0D44_11655 PF14765 Polyketide synthase dehydratase M0D44_11655 PF00550 Phosphopantetheine attachment site M0D44_11655 PF00698 Acyl transferase domain M0D44_11655 PF02801 Beta-ketoacyl synthase, C-terminal domain M0D44_11655 PF00109 Beta-ketoacyl synthase, N-terminal domain M0D44_11655 PF08659 KR domain M0D44_11655 PF08240 Alcohol dehydrogenase GroES-like domain M0D44_11655 PF00107 Zinc-binding dehydrogenase M0D44_11655 PF16197 Ketoacyl-synthetase C-terminal extension M0D44_11700 PF04616 Glycosyl hydrolases family 43 M0D44_11730 PF00553 Cellulose binding domain M0D44_11730 PF03422 Carbohydrate binding module (family 6) M0D44_11730 PF00331 Glycosyl hydrolase family 10 M0D44_11735 PF02614 Glucuronate isomerase M0D44_11765 PF00331 Glycosyl hydrolase family 10 M0D44_11770 PF08450 SMP-30/Gluconolactonase/LRE-like region M0D44_11800 PF01232 Mannitol dehydrogenase Rossmann domain M0D44_11800 PF08125 Mannitol dehydrogenase C-terminal domain M0D44_11805 PF07691 PA14 domain M0D44_11805 PF01915 Glycosyl hydrolase family 3 C-terminal domain M0D44_11805 PF00933 Glycosyl hydrolase family 3 N terminal domain M0D44_11805 PF14310 Fibronectin type III-like domain M0D44_11810 PF04616 Glycosyl hydrolases family 43 M0D44_11810 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain M0D44_11815 PF13378 Enolase C-terminal domain-like M0D44_11815 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M0D44_11825 PF07477 Glycosyl hydrolase family 67 C-terminus M0D44_11825 PF07488 Glycosyl hydrolase family 67 middle domain M0D44_11825 PF03648 Glycosyl hydrolase family 67 N-terminus M0D44_11830 PF00356 Bacterial regulatory proteins, lacI family M0D44_11840 PF01171 PP-loop family M0D44_11845 PF04381 Putative exonuclease, RdgC M0D44_11860 PF00762 Ferrochelatase M0D44_11870 PF02416 mttA/Hcf106 family M0D44_11875 PF02416 mttA/Hcf106 family M0D44_11880 PF00902 Sec-independent protein translocase protein (TatC) M0D44_11890 PF00958 GMP synthase C terminal domain M0D44_11890 PF00117 Glutamine amidotransferase class-I M0D44_11900 PF00437 Type II/IV secretion system protein M0D44_11900 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M0D44_11905 PF02091 Glycyl-tRNA synthetase alpha subunit M0D44_11910 PF05746 DALR anticodon binding domain M0D44_11910 PF02092 Glycyl-tRNA synthetase beta subunit M0D44_11915 PF13181 Tetratricopeptide repeat M0D44_11920 PF00593 TonB dependent receptor M0D44_11920 PF07715 TonB-dependent Receptor Plug Domain M0D44_11925 PF17243 POTRA domain TamA domain 1 M0D44_11925 PF01103 Surface antigen M0D44_11930 PF04357 TamB, inner membrane protein subunit of TAM complex M0D44_11950 PF13570 PQQ-like domain M0D44_11950 PF01011 PQQ enzyme repeat M0D44_11950 PF13360 PQQ-like domain M0D44_11965 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain M0D44_11965 PF06165 Glycosyltransferase family 36 M0D44_11975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_11975 PF00512 His Kinase A (phospho-acceptor) domain M0D44_11980 PF02659 Putative manganese efflux pump M0D44_11995 PF09339 IclR helix-turn-helix domain M0D44_11995 PF01614 Bacterial transcriptional regulator M0D44_12000 PF07690 Major Facilitator Superfamily M0D44_12005 PF05336 L-rhamnose mutarotase M0D44_12010 PF13378 Enolase C-terminal domain-like M0D44_12010 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M0D44_12015 PF01557 Fumarylacetoacetate (FAA) hydrolase family M0D44_12030 PF00248 Aldo/keto reductase family M0D44_12055 PF00196 Bacterial regulatory proteins, luxR family M0D44_12055 PF00072 Response regulator receiver domain M0D44_12060 PF13193 AMP-binding enzyme C-terminal domain M0D44_12060 PF00501 AMP-binding enzyme M0D44_12060 PF16177 Acetyl-coenzyme A synthetase N-terminus M0D44_12070 PF04341 Protein of unknown function, DUF485 M0D44_12075 PF00474 Sodium:solute symporter family M0D44_12080 PF00480 ROK family M0D44_12095 PF04226 Transglycosylase associated protein M0D44_12100 PF01648 4'-phosphopantetheinyl transferase superfamily M0D44_12105 PF09423 PhoD-like phosphatase M0D44_12105 PF16655 PhoD-like phosphatase, N-terminal domain M0D44_12110 PF09423 PhoD-like phosphatase M0D44_12110 PF16655 PhoD-like phosphatase, N-terminal domain M0D44_12115 PF02527 rRNA small subunit methyltransferase G M0D44_12135 PF13533 Biotin-lipoyl like M0D44_12145 PF00873 AcrB/AcrD/AcrF family M0D44_12150 PF00830 Ribosomal L28 family M0D44_12155 PF00471 Ribosomal protein L33 M0D44_12160 PF04909 Amidohydrolase M0D44_12165 PF04303 PrpF protein M0D44_12170 PF03737 Aldolase/RraA M0D44_12175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D44_12175 PF03466 LysR substrate binding domain M0D44_12180 PF13396 Phospholipase_D-nuclease N-terminal M0D44_12180 PF13091 PLD-like domain M0D44_12195 PF00580 UvrD/REP helicase N-terminal domain M0D44_12195 PF13361 UvrD-like helicase C-terminal domain M0D44_12205 PF12464 Maltose acetyltransferase M0D44_12205 PF14602 Hexapeptide repeat of succinyl-transferase M0D44_12245 PF00328 Histidine phosphatase superfamily (branch 2) M0D44_12260 PF04542 Sigma-70 region 2 M0D44_12260 PF08281 Sigma-70, region 4 M0D44_12270 PF03793 PASTA domain M0D44_12270 PF00069 Protein kinase domain M0D44_12280 PF01367 5'-3' exonuclease, C-terminal SAM fold M0D44_12280 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M0D44_12280 PF00476 DNA polymerase family A M0D44_12280 PF01612 3'-5' exonuclease M0D44_12285 PF00486 Transcriptional regulatory protein, C terminal M0D44_12285 PF00072 Response regulator receiver domain M0D44_12290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_12290 PF00512 His Kinase A (phospho-acceptor) domain M0D44_12295 PF00561 alpha/beta hydrolase fold M0D44_12320 PF00202 Aminotransferase class-III M0D44_12330 PF01218 Coproporphyrinogen III oxidase M0D44_12345 PF07676 WD40-like Beta Propeller Repeat M0D44_12345 PF00326 Prolyl oligopeptidase family M0D44_12360 PF01494 FAD binding domain M0D44_12365 PF00550 Phosphopantetheine attachment site M0D44_12375 PF01553 Acyltransferase M0D44_12425 PF00535 Glycosyl transferase family 2 M0D44_12435 PF02801 Beta-ketoacyl synthase, C-terminal domain M0D44_12435 PF00109 Beta-ketoacyl synthase, N-terminal domain M0D44_12440 PF05166 YcgL domain M0D44_12455 PF00723 Glycosyl hydrolases family 15 M0D44_12460 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain M0D44_12460 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain M0D44_12485 PF02254 TrkA-N domain M0D44_12485 PF00999 Sodium/hydrogen exchanger family M0D44_12490 PF03448 MgtE intracellular N domain M0D44_12490 PF00571 CBS domain M0D44_12490 PF01769 Divalent cation transporter M0D44_12500 PF13380 CoA binding domain M0D44_12500 PF13607 Succinyl-CoA ligase like flavodoxin domain M0D44_12500 PF00583 Acetyltransferase (GNAT) family M0D44_12510 PF03477 ATP cone domain M0D44_12510 PF02867 Ribonucleotide reductase, barrel domain M0D44_12510 PF00317 Ribonucleotide reductase, all-alpha domain M0D44_12515 PF00268 Ribonucleotide reductase, small chain M0D44_12545 PF03061 Thioesterase superfamily M0D44_12560 PF08546 Ketopantoate reductase PanE/ApbA C terminal M0D44_12560 PF02558 Ketopantoate reductase PanE/ApbA M0D44_12565 PF01061 ABC-2 type transporter M0D44_12570 PF00005 ABC transporter M0D44_12575 PF01383 CpcD/allophycocyanin linker domain M0D44_12575 PF00175 Oxidoreductase NAD-binding domain M0D44_12580 PF01545 Cation efflux family M0D44_12585 PF02583 Metal-sensitive transcriptional repressor M0D44_12595 PF01381 Helix-turn-helix M0D44_12605 PF00005 ABC transporter M0D44_12620 PF04820 Tryptophan halogenase M0D44_12640 PF00043 Glutathione S-transferase, C-terminal domain M0D44_12640 PF02798 Glutathione S-transferase, N-terminal domain M0D44_12645 PF00326 Prolyl oligopeptidase family M0D44_12645 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region M0D44_12670 PF00490 Delta-aminolevulinic acid dehydratase M0D44_12700 PF00175 Oxidoreductase NAD-binding domain M0D44_12700 PF00258 Flavodoxin M0D44_12700 PF00667 FAD binding domain M0D44_12720 PF08501 Shikimate dehydrogenase substrate binding domain M0D44_12720 PF01488 Shikimate / quinate 5-dehydrogenase M0D44_12720 PF18317 Shikimate 5'-dehydrogenase C-terminal domain M0D44_12735 PF13307 Helicase C-terminal domain M0D44_12735 PF06733 DEAD_2 M0D44_12740 PF06628 Catalase-related immune-responsive M0D44_12740 PF00199 Catalase M0D44_12765 PF01207 Dihydrouridine synthase (Dus) M0D44_12775 PF00486 Transcriptional regulatory protein, C terminal M0D44_12775 PF00072 Response regulator receiver domain M0D44_12780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_12795 PF06167 Glucose-regulated metallo-peptidase M90 M0D44_12805 PF02237 Biotin protein ligase C terminal domain M0D44_12805 PF03099 Biotin/lipoate A/B protein ligase family M0D44_12805 PF08279 HTH domain M0D44_12810 PF03309 Type III pantothenate kinase M0D44_12825 PF02223 Thymidylate kinase M0D44_12850 PF00491 Arginase family M0D44_12865 PF05532 CsbD-like M0D44_12870 PF00579 tRNA synthetases class I (W and Y) M0D44_12895 PF00892 EamA-like transporter family M0D44_12900 PF00892 EamA-like transporter family M0D44_12920 PF00005 ABC transporter M0D44_12925 PF13533 Biotin-lipoyl like M0D44_12930 PF07730 Histidine kinase M0D44_12935 PF00196 Bacterial regulatory proteins, luxR family M0D44_12935 PF00072 Response regulator receiver domain M0D44_12950 PF00199 Catalase M0D44_12955 PF00883 Cytosol aminopeptidase family, catalytic domain M0D44_12955 PF02789 Cytosol aminopeptidase family, N-terminal domain M0D44_12960 PF13419 Haloacid dehalogenase-like hydrolase M0D44_12965 PF01594 AI-2E family transporter M0D44_12985 PF00595 PDZ domain M0D44_12995 PF01370 NAD dependent epimerase/dehydratase family M0D44_12995 PF08338 Domain of unknown function (DUF1731) M0D44_13035 PF01139 tRNA-splicing ligase RtcB M0D44_13050 PF00440 Bacterial regulatory proteins, tetR family M0D44_13055 PF00970 Oxidoreductase FAD-binding domain M0D44_13055 PF00111 2Fe-2S iron-sulfur cluster binding domain M0D44_13055 PF00175 Oxidoreductase NAD-binding domain M0D44_13060 PF00487 Fatty acid desaturase M0D44_13065 PF00563 EAL domain M0D44_13065 PF12792 CSS motif domain associated with EAL M0D44_13110 PF13166 AAA domain M0D44_13130 PF13340 Putative transposase of IS4/5 family (DUF4096) M0D44_13165 PF04380 Membrane fusogenic activity M0D44_13170 PF00543 Nitrogen regulatory protein P-II M0D44_13175 PF00963 Cohesin domain M0D44_13175 PF00754 F5/8 type C domain M0D44_13175 PF00041 Fibronectin type III domain M0D44_13175 PF02838 Glycosyl hydrolase family 20, domain 2 M0D44_13175 PF07555 beta-N-acetylglucosaminidase M0D44_13195 PF17284 Spermidine synthase tetramerisation domain M0D44_13200 PF17810 Arginine decarboxylase helical bundle domain M0D44_13200 PF17944 Arginine decarboxylase C-terminal helical extension M0D44_13200 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain M0D44_13210 PF00501 AMP-binding enzyme M0D44_13210 PF13193 AMP-binding enzyme C-terminal domain M0D44_13210 PF00668 Condensation domain M0D44_13210 PF00550 Phosphopantetheine attachment site M0D44_13210 PF00975 Thioesterase domain M0D44_13215 PF03033 Glycosyltransferase family 28 N-terminal domain M0D44_13220 PF01757 Acyltransferase family M0D44_13225 PF00106 short chain dehydrogenase M0D44_13240 PF00750 tRNA synthetases class I (R) M0D44_13240 PF05746 DALR anticodon binding domain M0D44_13240 PF03485 Arginyl tRNA synthetase N terminal domain M0D44_13245 PF04002 RadC-like JAB domain M0D44_13250 PF04127 DNA / pantothenate metabolism flavoprotein M0D44_13250 PF02441 Flavoprotein M0D44_13255 PF00692 dUTPase M0D44_13260 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M0D44_13260 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M0D44_13260 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M0D44_13260 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M0D44_13275 PF00535 Glycosyl transferase family 2 M0D44_13280 PF01370 NAD dependent epimerase/dehydratase family M0D44_13290 PF02195 ParB-like nuclease domain M0D44_13290 PF17762 HTH domain found in ParB protein M0D44_13295 PF13614 AAA domain M0D44_13305 PF00156 Phosphoribosyl transferase domain M0D44_13310 PF03372 Endonuclease/Exonuclease/phosphatase family M0D44_13315 PF07690 Major Facilitator Superfamily M0D44_13325 PF03702 Anhydro-N-acetylmuramic acid kinase M0D44_13330 PF04225 Opacity-associated protein A LysM-like domain M0D44_13330 PF01551 Peptidase family M23 M0D44_13335 PF00579 tRNA synthetases class I (W and Y) M0D44_13365 PF00171 Aldehyde dehydrogenase family M0D44_13365 PF01619 Proline dehydrogenase M0D44_13365 PF14850 DNA-binding domain of Proline dehydrogenase M0D44_13365 PF18327 Proline utilization A proline dehydrogenase N-terminal domain M0D44_13375 PF02790 Cytochrome C oxidase subunit II, transmembrane domain M0D44_13375 PF00116 Cytochrome C oxidase subunit II, periplasmic domain M0D44_13380 PF00115 Cytochrome C and Quinol oxidase polypeptide I M0D44_13390 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 M0D44_13395 PF00510 Cytochrome c oxidase subunit III M0D44_13420 PF01040 UbiA prenyltransferase family M0D44_13430 PF13593 SBF-like CPA transporter family (DUF4137) M0D44_13440 PF10410 DnaB-helicase binding domain of primase M0D44_13440 PF08278 DNA primase DnaG DnaB-binding M0D44_13440 PF01807 CHC2 zinc finger M0D44_13440 PF08275 DNA primase catalytic core, N-terminal domain M0D44_13445 PF03631 Virulence factor BrkB M0D44_13455 PF09424 Yqey-like protein M0D44_13460 PF01165 Ribosomal protein S21 M0D44_13465 PF00814 Glycoprotease family M0D44_13470 PF02152 Dihydroneopterin aldolase M0D44_13475 PF14310 Fibronectin type III-like domain M0D44_13475 PF00933 Glycosyl hydrolase family 3 N terminal domain M0D44_13475 PF01915 Glycosyl hydrolase family 3 C-terminal domain M0D44_13480 PF07995 Glucose / Sorbosone dehydrogenase M0D44_13485 PF05360 yiaA/B two helix domain M0D44_13500 PF13520 Amino acid permease M0D44_13510 PF13378 Enolase C-terminal domain-like M0D44_13510 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M0D44_13520 PF01510 N-acetylmuramoyl-L-alanine amidase M0D44_13525 PF01427 D-ala-D-ala dipeptidase M0D44_13560 PF07063 Domain of unknown function (DUF1338) M0D44_13580 PF00873 AcrB/AcrD/AcrF family M0D44_13585 PF00873 AcrB/AcrD/AcrF family M0D44_13590 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M0D44_13595 PF07687 Peptidase dimerisation domain M0D44_13595 PF01546 Peptidase family M20/M25/M40 M0D44_13600 PF14489 QueF-like protein M0D44_13600 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term M0D44_13605 PF04972 BON domain M0D44_13605 PF01476 LysM domain M0D44_13615 PF03971 Monomeric isocitrate dehydrogenase M0D44_13625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D44_13625 PF03466 LysR substrate binding domain M0D44_13630 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) M0D44_13640 PF07498 Rho termination factor, N-terminal domain M0D44_13640 PF07497 Rho termination factor, RNA-binding domain M0D44_13640 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M0D44_13645 PF00085 Thioredoxin M0D44_13650 PF00270 DEAD/DEAH box helicase M0D44_13650 PF00271 Helicase conserved C-terminal domain M0D44_13650 PF12300 ATP-dependent RNA helicase RhlB M0D44_13655 PF00005 ABC transporter M0D44_13660 PF18075 FtsX extracellular domain M0D44_13665 PF01339 CheB methylesterase M0D44_13665 PF00072 Response regulator receiver domain M0D44_13670 PF03167 Uracil DNA glycosylase superfamily M0D44_13675 PF04542 Sigma-70 region 2 M0D44_13675 PF04545 Sigma-70, region 4 M0D44_13680 PF03458 UPF0126 domain M0D44_13685 PF07992 Pyridine nucleotide-disulphide oxidoreductase M0D44_13700 PF00043 Glutathione S-transferase, C-terminal domain M0D44_13700 PF13417 Glutathione S-transferase, N-terminal domain M0D44_13705 PF00270 DEAD/DEAH box helicase M0D44_13705 PF00271 Helicase conserved C-terminal domain M0D44_13705 PF17764 3′ DNA-binding domain (3′BD) M0D44_13705 PF18074 Primosomal protein N C-terminal domain M0D44_13705 PF18319 PriA DNA helicase Cys-rich region (CRR) domain M0D44_13725 PF01554 MatE M0D44_13730 PF01343 Peptidase family S49 M0D44_13755 PF01300 Telomere recombination M0D44_13760 PF01131 DNA topoisomerase M0D44_13760 PF01751 Toprim domain M0D44_13760 PF13368 Topoisomerase C-terminal repeat M0D44_13770 PF00114 Pilin (bacterial filament) M0D44_13770 PF07963 Prokaryotic N-terminal methylation motif M0D44_13775 PF04361 Protein of unknown function (DUF494) M0D44_13780 PF17782 DprA winged helix domain M0D44_13780 PF02481 DNA recombination-mediator protein A M0D44_13785 PF01476 LysM domain M0D44_13790 PF01327 Polypeptide deformylase M0D44_13795 PF02911 Formyl transferase, C-terminal domain M0D44_13795 PF00551 Formyl transferase M0D44_13800 PF01189 16S rRNA methyltransferase RsmB/F M0D44_13800 PF01029 NusB family M0D44_13815 PF00535 Glycosyl transferase family 2 M0D44_13835 PF00925 GTP cyclohydrolase II M0D44_13845 PF03279 Bacterial lipid A biosynthesis acyltransferase M0D44_13850 PF02580 D-Tyr-tRNA(Tyr) deacylase M0D44_13855 PF03979 Sigma-70 factor, region 1.1 M0D44_13855 PF00140 Sigma-70 factor, region 1.2 M0D44_13855 PF04542 Sigma-70 region 2 M0D44_13855 PF04539 Sigma-70 region 3 M0D44_13855 PF04545 Sigma-70, region 4 M0D44_13855 PF04546 Sigma-70, non-essential region M0D44_13950 PF02630 SCO1/SenC M0D44_13965 PF00557 Metallopeptidase family M24 M0D44_13975 PF00654 Voltage gated chloride channel M0D44_14010 PF01042 Endoribonuclease L-PSP M0D44_14015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D44_14015 PF03466 LysR substrate binding domain M0D44_14025 PF00005 ABC transporter M0D44_14040 PF07715 TonB-dependent Receptor Plug Domain M0D44_14040 PF00593 TonB dependent receptor M0D44_14085 PF08240 Alcohol dehydrogenase GroES-like domain M0D44_14085 PF13823 Alcohol dehydrogenase GroES-associated M0D44_14085 PF00107 Zinc-binding dehydrogenase M0D44_14110 PF02322 Cytochrome bd terminal oxidase subunit II M0D44_14115 PF01654 Cytochrome bd terminal oxidase subunit I M0D44_14120 PF02954 Bacterial regulatory protein, Fis family M0D44_14120 PF00072 Response regulator receiver domain M0D44_14120 PF00158 Sigma-54 interaction domain M0D44_14130 PF05067 Manganese containing catalase M0D44_14135 PF05974 Domain of unknown function (DUF892) M0D44_14150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_14150 PF06580 Histidine kinase M0D44_14150 PF00672 HAMP domain M0D44_14150 PF02743 Cache domain M0D44_14155 PF04397 LytTr DNA-binding domain M0D44_14155 PF00072 Response regulator receiver domain M0D44_14165 PF13520 Amino acid permease M0D44_14180 PF01431 Peptidase family M13 M0D44_14180 PF05649 Peptidase family M13 M0D44_14190 PF00248 Aldo/keto reductase family M0D44_14195 PF03358 NADPH-dependent FMN reductase M0D44_14200 PF03466 LysR substrate binding domain M0D44_14200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D44_14210 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase M0D44_14220 PF03167 Uracil DNA glycosylase superfamily M0D44_14225 PF02469 Fasciclin domain M0D44_14235 PF00999 Sodium/hydrogen exchanger family M0D44_14240 PF00005 ABC transporter M0D44_14245 PF01061 ABC-2 type transporter M0D44_14270 PF04151 Bacterial pre-peptidase C-terminal domain M0D44_14270 PF09286 Pro-kumamolisin, activation domain M0D44_14280 PF00082 Subtilase family M0D44_14280 PF04151 Bacterial pre-peptidase C-terminal domain M0D44_14285 PF05662 Coiled stalk of trimeric autotransporter adhesin M0D44_14285 PF05658 Head domain of trimeric autotransporter adhesin M0D44_14285 PF03895 YadA-like membrane anchor domain M0D44_14285 PF13018 Extended Signal Peptide of Type V secretion system M0D44_14290 PF00072 Response regulator receiver domain M0D44_14290 PF00512 His Kinase A (phospho-acceptor) domain M0D44_14290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_14290 PF08448 PAS fold M0D44_14290 PF13188 PAS domain M0D44_14295 PF00072 Response regulator receiver domain M0D44_14295 PF00486 Transcriptional regulatory protein, C terminal M0D44_14310 PF13677 Membrane MotB of proton-channel complex MotA/MotB M0D44_14310 PF00691 OmpA family M0D44_14315 PF01618 MotA/TolQ/ExbB proton channel family M0D44_14325 PF01641 SelR domain M0D44_14335 PF01037 Lrp/AsnC ligand binding domain M0D44_14340 PF01266 FAD dependent oxidoreductase M0D44_14345 PF01168 Alanine racemase, N-terminal domain M0D44_14345 PF00842 Alanine racemase, C-terminal domain M0D44_14365 PF00989 PAS fold M0D44_14365 PF00512 His Kinase A (phospho-acceptor) domain M0D44_14365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_14375 PF07995 Glucose / Sorbosone dehydrogenase M0D44_14385 PF05175 Methyltransferase small domain M0D44_14385 PF08468 Methyltransferase small domain N-terminal M0D44_14390 PF01479 S4 domain M0D44_14390 PF00849 RNA pseudouridylate synthase M0D44_14395 PF13419 Haloacid dehalogenase-like hydrolase M0D44_14415 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M0D44_14415 PF00072 Response regulator receiver domain M0D44_14415 PF00512 His Kinase A (phospho-acceptor) domain M0D44_14415 PF01627 Hpt domain M0D44_14415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_14415 PF00672 HAMP domain M0D44_14425 PF04461 Protein of unknown function (DUF520) M0D44_14430 PF00892 EamA-like transporter family M0D44_14435 PF09383 NIL domain M0D44_14435 PF00005 ABC transporter M0D44_14440 PF00528 Binding-protein-dependent transport system inner membrane component M0D44_14445 PF03180 NLPA lipoprotein M0D44_14480 PF02817 e3 binding domain M0D44_14480 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M0D44_14480 PF00364 Biotin-requiring enzyme M0D44_14490 PF07992 Pyridine nucleotide-disulphide oxidoreductase M0D44_14490 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M0D44_14515 PF00119 ATP synthase A chain M0D44_14520 PF00137 ATP synthase subunit C M0D44_14525 PF00430 ATP synthase B/B' CF(0) M0D44_14530 PF00213 ATP synthase delta (OSCP) subunit M0D44_14535 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M0D44_14535 PF00306 ATP synthase alpha/beta chain, C terminal domain M0D44_14535 PF02874 ATP synthase alpha/beta family, beta-barrel domain M0D44_14540 PF00231 ATP synthase M0D44_14545 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M0D44_14545 PF02874 ATP synthase alpha/beta family, beta-barrel domain M0D44_14550 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain M0D44_14565 PF00132 Bacterial transferase hexapeptide (six repeats) M0D44_14565 PF14602 Hexapeptide repeat of succinyl-transferase M0D44_14565 PF12804 MobA-like NTP transferase domain M0D44_14575 PF00672 HAMP domain M0D44_14575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_14575 PF00512 His Kinase A (phospho-acceptor) domain M0D44_14580 PF02954 Bacterial regulatory protein, Fis family M0D44_14580 PF00072 Response regulator receiver domain M0D44_14580 PF00158 Sigma-54 interaction domain M0D44_14585 PF00005 ABC transporter M0D44_14585 PF02687 FtsX-like permease family M0D44_14585 PF12704 MacB-like periplasmic core domain M0D44_14590 PF00005 ABC transporter M0D44_14590 PF02687 FtsX-like permease family M0D44_14590 PF12704 MacB-like periplasmic core domain M0D44_14595 PF12704 MacB-like periplasmic core domain M0D44_14595 PF02687 FtsX-like permease family M0D44_14595 PF00005 ABC transporter M0D44_14600 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M0D44_14605 PF01380 SIS domain M0D44_14630 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M0D44_14635 PF05275 Copper resistance protein B precursor (CopB) M0D44_14640 PF07732 Multicopper oxidase M0D44_14640 PF00394 Multicopper oxidase M0D44_14640 PF07731 Multicopper oxidase M0D44_14655 PF01432 Peptidase family M3 M0D44_14665 PF00109 Beta-ketoacyl synthase, N-terminal domain M0D44_14665 PF02801 Beta-ketoacyl synthase, C-terminal domain M0D44_14670 PF07977 FabA-like domain M0D44_14680 PF00817 impB/mucB/samB family M0D44_14680 PF11799 impB/mucB/samB family C-terminal domain M0D44_14685 PF13419 Haloacid dehalogenase-like hydrolase M0D44_14695 PF13185 GAF domain M0D44_14710 PF01242 6-pyruvoyl tetrahydropterin synthase M0D44_14715 PF00270 DEAD/DEAH box helicase M0D44_14715 PF00271 Helicase conserved C-terminal domain M0D44_14725 PF02798 Glutathione S-transferase, N-terminal domain M0D44_14725 PF14497 Glutathione S-transferase, C-terminal domain M0D44_14730 PF00437 Type II/IV secretion system protein M0D44_14750 PF00291 Pyridoxal-phosphate dependent enzyme M0D44_14750 PF00571 CBS domain M0D44_14755 PF01053 Cys/Met metabolism PLP-dependent enzyme M0D44_14765 PF00005 ABC transporter M0D44_14770 PF00132 Bacterial transferase hexapeptide (six repeats) M0D44_14775 PF00535 Glycosyl transferase family 2 M0D44_14780 PF14307 Glycosyltransferase WbsX M0D44_14780 PF05045 Rhamnan synthesis protein F M0D44_14790 PF01209 ubiE/COQ5 methyltransferase family M0D44_14805 PF07992 Pyridine nucleotide-disulphide oxidoreductase M0D44_14805 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M0D44_14810 PF01370 NAD dependent epimerase/dehydratase family M0D44_14820 PF00106 short chain dehydrogenase M0D44_14825 PF04030 D-arabinono-1,4-lactone oxidase M0D44_14825 PF01565 FAD binding domain M0D44_14830 PF01040 UbiA prenyltransferase family M0D44_14840 PF01012 Electron transfer flavoprotein domain M0D44_14840 PF00766 Electron transfer flavoprotein FAD-binding domain M0D44_14845 PF01012 Electron transfer flavoprotein domain M0D44_14850 PF16363 GDP-mannose 4,6 dehydratase M0D44_14855 PF00483 Nucleotidyl transferase M0D44_14860 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase M0D44_14865 PF04321 RmlD substrate binding domain M0D44_14870 PF00483 Nucleotidyl transferase M0D44_14870 PF01050 Mannose-6-phosphate isomerase M0D44_14875 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M0D44_14875 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M0D44_14875 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M0D44_14875 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M0D44_14880 PF01144 Coenzyme A transferase M0D44_14885 PF01144 Coenzyme A transferase M0D44_14890 PF14307 Glycosyltransferase WbsX M0D44_14890 PF05045 Rhamnan synthesis protein F M0D44_14910 PF03886 ABC-type transport auxiliary lipoprotein component M0D44_14910 PF02470 MlaD protein M0D44_14915 PF00005 ABC transporter M0D44_14920 PF02405 Permease MlaE M0D44_14930 PF00816 H-NS histone family M0D44_14935 PF04073 Aminoacyl-tRNA editing domain M0D44_14935 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M0D44_14935 PF03129 Anticodon binding domain M0D44_14945 PF01066 CDP-alcohol phosphatidyltransferase M0D44_14960 PF00544 Pectate lyase M0D44_14965 PF00732 GMC oxidoreductase M0D44_14965 PF05199 GMC oxidoreductase M0D44_14970 PF00171 Aldehyde dehydrogenase family M0D44_14975 PF02028 BCCT, betaine/carnitine/choline family transporter M0D44_14985 PF01323 DSBA-like thioredoxin domain M0D44_14995 PF00034 Cytochrome c M0D44_15000 PF01926 50S ribosome-binding GTPase M0D44_15005 PF04107 Glutamate-cysteine ligase family 2(GCS2) M0D44_15010 PF00672 HAMP domain M0D44_15010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_15010 PF00512 His Kinase A (phospho-acceptor) domain M0D44_15015 PF00486 Transcriptional regulatory protein, C terminal M0D44_15015 PF00072 Response regulator receiver domain M0D44_15025 PF02583 Metal-sensitive transcriptional repressor M0D44_15030 PF00107 Zinc-binding dehydrogenase M0D44_15030 PF08240 Alcohol dehydrogenase GroES-like domain M0D44_15035 PF04828 Glutathione-dependent formaldehyde-activating enzyme M0D44_15040 PF00756 Putative esterase M0D44_15060 PF00155 Aminotransferase class I and II M0D44_15060 PF00392 Bacterial regulatory proteins, gntR family M0D44_15065 PF00892 EamA-like transporter family M0D44_15075 PF02645 Uncharacterised protein, DegV family COG1307 M0D44_15110 PF01979 Amidohydrolase family M0D44_15115 PF01979 Amidohydrolase family M0D44_15130 PF00462 Glutaredoxin M0D44_15135 PF01522 Polysaccharide deacetylase M0D44_15150 PF00155 Aminotransferase class I and II M0D44_15155 PF03193 RsgA GTPase M0D44_15175 PF00128 Alpha amylase, catalytic domain M0D44_15190 PF00356 Bacterial regulatory proteins, lacI family M0D44_15195 PF00106 short chain dehydrogenase M0D44_15200 PF03600 Citrate transporter M0D44_15210 PF00486 Transcriptional regulatory protein, C terminal M0D44_15210 PF00072 Response regulator receiver domain M0D44_15215 PF00512 His Kinase A (phospho-acceptor) domain M0D44_15215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_15215 PF08521 Two-component sensor kinase N-terminal M0D44_15225 PF00196 Bacterial regulatory proteins, luxR family M0D44_15225 PF00072 Response regulator receiver domain M0D44_15245 PF00248 Aldo/keto reductase family M0D44_15250 PF03466 LysR substrate binding domain M0D44_15250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D44_15260 PF07690 Major Facilitator Superfamily M0D44_15265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_15265 PF00512 His Kinase A (phospho-acceptor) domain M0D44_15280 PF00375 Sodium:dicarboxylate symporter family M0D44_15285 PF00390 Malic enzyme, N-terminal domain M0D44_15285 PF03949 Malic enzyme, NAD binding domain M0D44_15285 PF01515 Phosphate acetyl/butaryl transferase M0D44_15360 PF00390 Malic enzyme, N-terminal domain M0D44_15360 PF03949 Malic enzyme, NAD binding domain M0D44_15360 PF01515 Phosphate acetyl/butaryl transferase M0D44_15395 PF00665 Integrase core domain M0D44_15395 PF13333 Integrase core domain M0D44_15395 PF13276 HTH-like domain M0D44_15400 PF01527 Transposase M0D44_15430 PF00664 ABC transporter transmembrane region M0D44_15430 PF00005 ABC transporter M0D44_15430 PF03412 Peptidase C39 family M0D44_15455 PF03279 Bacterial lipid A biosynthesis acyltransferase M0D44_15460 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) M0D44_15465 PF02321 Outer membrane efflux protein M0D44_15480 PF00990 Diguanylate cyclase, GGDEF domain M0D44_15485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D44_15490 PF00330 Aconitase family (aconitate hydratase) M0D44_15495 PF00694 Aconitase C-terminal domain M0D44_15505 PF00180 Isocitrate/isopropylmalate dehydrogenase M0D44_15510 PF00682 HMGL-like M0D44_15510 PF08502 LeuA allosteric (dimerisation) domain M0D44_15515 PF00291 Pyridoxal-phosphate dependent enzyme M0D44_15525 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M0D44_15525 PF00205 Thiamine pyrophosphate enzyme, central domain M0D44_15525 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M0D44_15530 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain M0D44_15530 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain M0D44_15540 PF00672 HAMP domain M0D44_15540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D44_15545 PF07676 WD40-like Beta Propeller Repeat M0D44_15545 PF00326 Prolyl oligopeptidase family M0D44_15550 PF13667 ThiC-associated domain M0D44_15550 PF01964 Radical SAM ThiC family M0D44_15555 PF00486 Transcriptional regulatory protein, C terminal M0D44_15555 PF18500 CadC C-terminal domain 1 M0D44_15560 PF12833 Helix-turn-helix domain M0D44_15565 PF07715 TonB-dependent Receptor Plug Domain M0D44_15565 PF00593 TonB dependent receptor M0D44_15575 PF00719 Inorganic pyrophosphatase M0D44_15585 PF03030 Inorganic H+ pyrophosphatase M0D44_15610 PF04610 TrbL/VirB6 plasmid conjugal transfer protein M0D44_15630 PF04610 TrbL/VirB6 plasmid conjugal transfer protein M0D44_15640 PF00365 Phosphofructokinase M0D44_15650 PF08245 Mur ligase middle domain M0D44_15650 PF02875 Mur ligase family, glutamate ligase domain M0D44_15650 PF01225 Mur ligase family, catalytic domain M0D44_15660 PF01062 Bestrophin, RFP-TM, chloride channel M0D44_15665 PF01569 PAP2 superfamily M0D44_15690 PF00202 Aminotransferase class-III M0D44_15705 PF01593 Flavin containing amine oxidoreductase M0D44_15710 PF13442 Cytochrome C oxidase, cbb3-type, subunit III M0D44_15710 PF00034 Cytochrome c M0D44_15720 PF00155 Aminotransferase class I and II M0D44_15725 PF00127 Copper binding proteins, plastocyanin/azurin family M0D44_15735 PF00196 Bacterial regulatory proteins, luxR family M0D44_15735 PF17874 MalT-like TPR region M0D44_15740 PF00202 Aminotransferase class-III M0D44_15755 PF02581 Thiamine monophosphate synthase M0D44_15760 PF00301 Rubredoxin M0D44_15765 PF13369 Transglutaminase-like superfamily M0D44_15775 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) M0D44_15785 PF01812 5-formyltetrahydrofolate cyclo-ligase family M0D44_15795 PF05164 Cell division protein ZapA M0D44_15805 PF03695 Uncharacterised protein family (UPF0149) M0D44_15810 PF05195 Aminopeptidase P, N-terminal domain M0D44_15810 PF00557 Metallopeptidase family M24 M0D44_15820 PF00557 Metallopeptidase family M24 M0D44_15835 PF06969 HemN C-terminal domain M0D44_15835 PF04055 Radical SAM superfamily M0D44_15840 PF01725 Ham1 family M0D44_15850 PF03725 3' exoribonuclease family, domain 2 M0D44_15850 PF01138 3' exoribonuclease family, domain 1 M0D44_15855 PF08340 Domain of unknown function (DUF1732) M0D44_15855 PF03755 YicC-like family, N-terminal region M0D44_15860 PF00625 Guanylate kinase M0D44_15865 PF01192 RNA polymerase Rpb6 M0D44_15880 PF08402 TOBE domain M0D44_15880 PF00005 ABC transporter M0D44_15885 PF00528 Binding-protein-dependent transport system inner membrane component M0D44_15890 PF00528 Binding-protein-dependent transport system inner membrane component M0D44_15895 PF04966 Carbohydrate-selective porin, OprB family M0D44_15905 PF04198 Putative sugar-binding domain M0D44_15910 PF13419 Haloacid dehalogenase-like hydrolase M0D44_15915 PF13291 ACT domain M0D44_15915 PF04607 Region found in RelA / SpoT proteins M0D44_15915 PF02824 TGS domain M0D44_15920 PF03466 LysR substrate binding domain M0D44_15920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D44_15925 PF00701 Dihydrodipicolinate synthetase family M0D44_15930 PF00171 Aldehyde dehydrogenase family M0D44_15935 PF07690 Major Facilitator Superfamily M0D44_15940 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M0D44_15940 PF13378 Enolase C-terminal domain-like M0D44_15945 PF03573 outer membrane porin, OprD family M0D44_15950 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus M0D44_15950 PF08666 SAF domain M0D44_15955 PF01042 Endoribonuclease L-PSP M0D44_15960 PF00270 DEAD/DEAH box helicase M0D44_15960 PF00271 Helicase conserved C-terminal domain M0D44_15960 PF17191 RecG wedge domain M0D44_15965 PF01156 Inosine-uridine preferring nucleoside hydrolase M0D44_15970 PF01197 Ribosomal protein L31 M0D44_15975 PF00285 Citrate synthase, C-terminal domain M0D44_15990 PF17092 Penicillin-binding protein OB-like domain M0D44_15990 PF00912 Transglycosylase M0D44_15990 PF00905 Penicillin binding protein transpeptidase domain M0D44_15995 PF11104 Type IV pilus assembly protein PilM; M0D44_16000 PF05137 Fimbrial assembly protein (PilN) M0D44_16005 PF04350 Pilus assembly protein, PilO M0D44_16010 PF04351 Pilus assembly protein, PilP M0D44_16015 PF11741 AMIN domain M0D44_16015 PF00263 Bacterial type II and III secretion system protein M0D44_16015 PF03958 Bacterial type II/III secretion system short domain M0D44_16015 PF07660 Secretin and TonB N terminus short domain M0D44_16040 PF00092 von Willebrand factor type A domain M0D44_16040 PF07584 Aerotolerance regulator N-terminal M0D44_16050 PF00375 Sodium:dicarboxylate symporter family M0D44_16055 PF02779 Transketolase, pyrimidine binding domain M0D44_16055 PF02780 Transketolase, C-terminal domain M0D44_16055 PF00456 Transketolase, thiamine diphosphate binding domain M0D44_16060 PF00593 TonB dependent receptor M0D44_16060 PF07715 TonB-dependent Receptor Plug Domain M0D44_16065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D44_16065 PF03466 LysR substrate binding domain M0D44_16075 PF04225 Opacity-associated protein A LysM-like domain M0D44_16075 PF01551 Peptidase family M23 M0D44_16080 PF03734 L,D-transpeptidase catalytic domain M0D44_16080 PF01476 LysM domain M0D44_16105 PF00501 AMP-binding enzyme M0D44_16125 PF00486 Transcriptional regulatory protein, C terminal M0D44_16125 PF00072 Response regulator receiver domain M0D44_16130 PF00512 His Kinase A (phospho-acceptor) domain M0D44_16130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_16130 PF08521 Two-component sensor kinase N-terminal M0D44_16150 PF03459 TOBE domain M0D44_16150 PF00005 ABC transporter M0D44_16155 PF00528 Binding-protein-dependent transport system inner membrane component M0D44_16165 PF04273 Putative phosphatase (DUF442) M0D44_16165 PF00753 Metallo-beta-lactamase superfamily M0D44_16175 PF03922 OmpW family M0D44_16190 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M0D44_16190 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M0D44_16220 PF00162 Phosphoglycerate kinase M0D44_16225 PF13419 Haloacid dehalogenase-like hydrolase M0D44_16230 PF00224 Pyruvate kinase, barrel domain M0D44_16230 PF02887 Pyruvate kinase, alpha/beta domain M0D44_16235 PF00274 Fructose-bisphosphate aldolase class-I M0D44_16240 PF01661 Macro domain M0D44_16250 PF00291 Pyridoxal-phosphate dependent enzyme M0D44_16255 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M0D44_16255 PF14824 Sirohaem biosynthesis protein central M0D44_16255 PF10414 Sirohaem synthase dimerisation region M0D44_16260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D44_16260 PF03466 LysR substrate binding domain M0D44_16270 PF00512 His Kinase A (phospho-acceptor) domain M0D44_16270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_16270 PF01627 Hpt domain M0D44_16270 PF00072 Response regulator receiver domain M0D44_16270 PF00672 HAMP domain M0D44_16290 PF01507 Phosphoadenosine phosphosulfate reductase family M0D44_16295 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M0D44_16295 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M0D44_16300 PF00175 Oxidoreductase NAD-binding domain M0D44_16300 PF00258 Flavodoxin M0D44_16300 PF00667 FAD binding domain M0D44_16305 PF01507 Phosphoadenosine phosphosulfate reductase family M0D44_16310 PF00009 Elongation factor Tu GTP binding domain M0D44_16315 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M0D44_16315 PF00529 HlyD membrane-fusion protein of T1SS M0D44_16320 PF00873 AcrB/AcrD/AcrF family M0D44_16335 PF11838 ERAP1-like C-terminal domain M0D44_16335 PF01433 Peptidase family M1 domain M0D44_16345 PF00588 SpoU rRNA Methylase family M0D44_16345 PF08032 RNA 2'-O ribose methyltransferase substrate binding M0D44_16350 PF00135 Carboxylesterase family M0D44_16355 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation M0D44_16355 PF10566 Glycoside hydrolase 97 M0D44_16355 PF14508 Glycosyl-hydrolase 97 N-terminal M0D44_16360 PF02836 Glycosyl hydrolases family 2, TIM barrel domain M0D44_16360 PF16355 Domain of unknown function (DUF4982) M0D44_16360 PF00703 Glycosyl hydrolases family 2 M0D44_16360 PF13287 Fn3 associated M0D44_16360 PF02837 Glycosyl hydrolases family 2, sugar binding domain M0D44_16380 PF00356 Bacterial regulatory proteins, lacI family M0D44_16390 PF01741 Large-conductance mechanosensitive channel, MscL M0D44_16395 PF01557 Fumarylacetoacetate (FAA) hydrolase family M0D44_16410 PF03600 Citrate transporter M0D44_16410 PF02080 TrkA-C domain M0D44_16415 PF02390 Putative methyltransferase M0D44_16420 PF05690 Thiazole biosynthesis protein ThiG M0D44_16430 PF03797 Autotransporter beta-domain M0D44_16430 PF00657 GDSL-like Lipase/Acylhydrolase M0D44_16480 PF13361 UvrD-like helicase C-terminal domain M0D44_16480 PF00580 UvrD/REP helicase N-terminal domain M0D44_16500 PF04002 RadC-like JAB domain M0D44_16575 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) M0D44_16575 PF00128 Alpha amylase, catalytic domain M0D44_16580 PF18030 RimK PreATP-grasp domain M0D44_16580 PF08443 RimK-like ATP-grasp domain M0D44_16590 PF00486 Transcriptional regulatory protein, C terminal M0D44_16590 PF00072 Response regulator receiver domain M0D44_16595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_16595 PF00512 His Kinase A (phospho-acceptor) domain M0D44_16595 PF00989 PAS fold M0D44_16595 PF11808 Phosphate regulon sensor protein PhoR M0D44_16610 PF03527 RHS protein M0D44_16615 PF01121 Dephospho-CoA kinase M0D44_16620 PF06750 Bacterial Peptidase A24 N-terminal domain M0D44_16620 PF01478 Type IV leader peptidase family M0D44_16625 PF00482 Type II secretion system (T2SS), protein F M0D44_16630 PF00114 Pilin (bacterial filament) M0D44_16630 PF07963 Prokaryotic N-terminal methylation motif M0D44_16645 PF00437 Type II/IV secretion system protein M0D44_16645 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M0D44_16650 PF00158 Sigma-54 interaction domain M0D44_16650 PF00072 Response regulator receiver domain M0D44_16650 PF02954 Bacterial regulatory protein, Fis family M0D44_16655 PF00512 His Kinase A (phospho-acceptor) domain M0D44_16655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_16660 PF08442 ATP-grasp domain M0D44_16660 PF00549 CoA-ligase M0D44_16665 PF02629 CoA binding domain M0D44_16665 PF00549 CoA-ligase M0D44_16675 PF00795 Carbon-nitrogen hydrolase M0D44_16675 PF02540 NAD synthase M0D44_16685 PF13525 Outer membrane lipoprotein M0D44_16690 PF00849 RNA pseudouridylate synthase M0D44_16695 PF02578 Multi-copper polyphenol oxidoreductase laccase M0D44_16705 PF04134 Protein of unknown function, DUF393 M0D44_16710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D44_16710 PF02203 Tar ligand binding domain homologue M0D44_16710 PF00672 HAMP domain M0D44_16715 PF01011 PQQ enzyme repeat M0D44_16720 PF00982 Glycosyltransferase family 20 M0D44_16725 PF00723 Glycosyl hydrolases family 15 M0D44_16730 PF02358 Trehalose-phosphatase M0D44_16735 PF07715 TonB-dependent Receptor Plug Domain M0D44_16735 PF00593 TonB dependent receptor M0D44_16750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D44_16750 PF03466 LysR substrate binding domain M0D44_16775 PF01541 GIY-YIG catalytic domain M0D44_16780 PF10431 C-terminal, D2-small domain, of ClpB protein M0D44_16780 PF00004 ATPase family associated with various cellular activities (AAA) M0D44_16780 PF17871 AAA lid domain M0D44_16780 PF07724 AAA domain (Cdc48 subfamily) M0D44_16780 PF02861 Clp amino terminal domain, pathogenicity island component M0D44_16795 PF00005 ABC transporter M0D44_16795 PF00664 ABC transporter transmembrane region M0D44_16795 PF03412 Peptidase C39 family M0D44_16815 PF07715 TonB-dependent Receptor Plug Domain M0D44_16815 PF00593 TonB dependent receptor M0D44_16835 PF12557 Cob(I)alamin adenosyltransferase N terminal M0D44_16835 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP M0D44_16840 PF17113 Regulatory signalling modulator protein AmpE M0D44_16840 PF03186 CobD/Cbib protein M0D44_16845 PF00155 Aminotransferase class I and II M0D44_16850 PF07685 CobB/CobQ-like glutamine amidotransferase domain M0D44_16850 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain M0D44_16855 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase M0D44_16860 PF02277 Phosphoribosyltransferase M0D44_16870 PF02654 Cobalamin-5-phosphate synthase M0D44_16890 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain M0D44_16890 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain M0D44_16895 PF06276 Ferric iron reductase FhuF-like transporter M0D44_16895 PF04183 IucA / IucC family M0D44_16900 PF07690 Major Facilitator Superfamily M0D44_16905 PF06276 Ferric iron reductase FhuF-like transporter M0D44_16905 PF04183 IucA / IucC family M0D44_16915 PF07715 TonB-dependent Receptor Plug Domain M0D44_16915 PF07660 Secretin and TonB N terminus short domain M0D44_16915 PF00593 TonB dependent receptor M0D44_16920 PF03328 HpcH/HpaI aldolase/citrate lyase family M0D44_16940 PF00999 Sodium/hydrogen exchanger family M0D44_16940 PF02254 TrkA-N domain M0D44_16945 PF00593 TonB dependent receptor M0D44_16945 PF07715 TonB-dependent Receptor Plug Domain M0D44_16950 PF07715 TonB-dependent Receptor Plug Domain M0D44_16950 PF00593 TonB dependent receptor M0D44_16965 PF07715 TonB-dependent Receptor Plug Domain M0D44_16965 PF00593 TonB dependent receptor M0D44_16970 PF12848 ABC transporter M0D44_16970 PF00005 ABC transporter M0D44_16980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D44_16980 PF03466 LysR substrate binding domain M0D44_17000 PF04185 Phosphoesterase family M0D44_17000 PF05506 Domain of unknown function (DUF756) M0D44_17010 PF07690 Major Facilitator Superfamily M0D44_17025 PF02938 GAD domain M0D44_17025 PF00152 tRNA synthetases class II (D, K and N) M0D44_17025 PF01336 OB-fold nucleic acid binding domain M0D44_17040 PF01709 Transcriptional regulator M0D44_17045 PF02075 Crossover junction endodeoxyribonuclease RuvC M0D44_17050 PF01330 RuvA N terminal domain M0D44_17050 PF07499 RuvA, C-terminal domain M0D44_17055 PF02705 K+ potassium transporter M0D44_17065 PF05496 Holliday junction DNA helicase RuvB P-loop domain M0D44_17065 PF17864 RuvB AAA lid domain M0D44_17065 PF05491 RuvB C-terminal winged helix domain M0D44_17070 PF03061 Thioesterase superfamily M0D44_17075 PF01618 MotA/TolQ/ExbB proton channel family M0D44_17080 PF02472 Biopolymer transport protein ExbD/TolR M0D44_17090 PF07676 WD40-like Beta Propeller Repeat M0D44_17090 PF04052 TolB amino-terminal domain M0D44_17095 PF00691 OmpA family M0D44_17105 PF04055 Radical SAM superfamily M0D44_17115 PF06508 Queuosine biosynthesis protein QueC M0D44_17130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D44_17130 PF03466 LysR substrate binding domain M0D44_17135 PF01810 LysE type translocator M0D44_17145 PF00672 HAMP domain M0D44_17145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D44_17145 PF02203 Tar ligand binding domain homologue M0D44_17155 PF00849 RNA pseudouridylate synthase M0D44_17155 PF01479 S4 domain M0D44_17175 PF00270 DEAD/DEAH box helicase M0D44_17175 PF00271 Helicase conserved C-terminal domain M0D44_17175 PF00570 HRDC domain M0D44_17175 PF16124 RecQ zinc-binding M0D44_17175 PF09382 RQC domain M0D44_17180 PF00210 Ferritin-like domain M0D44_17185 PF00270 DEAD/DEAH box helicase M0D44_17185 PF04408 Helicase associated domain (HA2) M0D44_17185 PF00271 Helicase conserved C-terminal domain M0D44_17185 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold M0D44_17185 PF11898 Domain of unknown function (DUF3418) M0D44_17215 PF04055 Radical SAM superfamily M0D44_17215 PF13186 Iron-sulfur cluster-binding domain M0D44_17220 PF05402 Coenzyme PQQ synthesis protein D (PqqD) M0D44_17225 PF03070 TENA/THI-4/PQQC family M0D44_17230 PF12706 Beta-lactamase superfamily domain M0D44_17235 PF08042 PqqA family M0D44_17240 PF13291 ACT domain M0D44_17240 PF04607 Region found in RelA / SpoT proteins M0D44_17240 PF02824 TGS domain M0D44_17250 PF00535 Glycosyl transferase family 2 M0D44_17255 PF00912 Transglycosylase M0D44_17255 PF00905 Penicillin binding protein transpeptidase domain M0D44_17255 PF14814 Bifunctional transglycosylase second domain M0D44_17265 PF04851 Type III restriction enzyme, res subunit M0D44_17265 PF13307 Helicase C-terminal domain M0D44_17270 PF00814 Glycoprotease family M0D44_17275 PF03747 ADP-ribosylglycohydrolase M0D44_17285 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain M0D44_17285 PF02951 Prokaryotic glutathione synthetase, N-terminal domain M0D44_17290 PF00072 Response regulator receiver domain M0D44_17295 PF00072 Response regulator receiver domain M0D44_17300 PF01584 CheW-like domain M0D44_17305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D44_17305 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term M0D44_17310 PF01584 CheW-like domain M0D44_17310 PF02895 Signal transducing histidine kinase, homodimeric domain M0D44_17310 PF01627 Hpt domain M0D44_17310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_17310 PF00072 Response regulator receiver domain M0D44_17325 PF13302 Acetyltransferase (GNAT) domain M0D44_17335 PF08281 Sigma-70, region 4 M0D44_17335 PF04542 Sigma-70 region 2 M0D44_17340 PF12034 Domain of unknown function (DUF3520) M0D44_17340 PF00092 von Willebrand factor type A domain M0D44_17340 PF12450 von Willebrand factor M0D44_17345 PF01112 Asparaginase M0D44_17350 PF03932 CutC family M0D44_17380 PF01301 Glycosyl hydrolases family 35 M0D44_17385 PF17678 Glycosyl hydrolase family 92 N-terminal domain M0D44_17385 PF07971 Glycosyl hydrolase family 92 M0D44_17395 PF02056 Family 4 glycosyl hydrolase M0D44_17395 PF11975 Family 4 glycosyl hydrolase C-terminal domain M0D44_17405 PF13520 Amino acid permease M0D44_17410 PF01301 Glycosyl hydrolases family 35 M0D44_17420 PF00933 Glycosyl hydrolase family 3 N terminal domain M0D44_17420 PF14310 Fibronectin type III-like domain M0D44_17420 PF01915 Glycosyl hydrolase family 3 C-terminal domain M0D44_17420 PF07691 PA14 domain M0D44_17430 PF02838 Glycosyl hydrolase family 20, domain 2 M0D44_17430 PF07691 PA14 domain M0D44_17430 PF00728 Glycosyl hydrolase family 20, catalytic domain M0D44_17440 PF00704 Glycosyl hydrolases family 18 M0D44_17440 PF01476 LysM domain M0D44_17455 PF02685 Glucokinase M0D44_17460 PF04452 RNA methyltransferase M0D44_17465 PF00202 Aminotransferase class-III M0D44_17470 PF00293 NUDIX domain M0D44_17475 PF00459 Inositol monophosphatase family M0D44_17480 PF03819 MazG nucleotide pyrophosphohydrolase domain M0D44_17485 PF02694 Uncharacterised BCR, YnfA/UPF0060 family M0D44_17490 PF01145 SPFH domain / Band 7 family M0D44_17490 PF16200 C-terminal region of band_7 M0D44_17500 PF01571 Aminomethyltransferase folate-binding domain M0D44_17500 PF08669 Glycine cleavage T-protein C-terminal barrel domain M0D44_17505 PF01597 Glycine cleavage H-protein M0D44_17530 PF09317 Domain of unknown function (DUF1974) M0D44_17530 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M0D44_17530 PF02770 Acyl-CoA dehydrogenase, middle domain M0D44_17530 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M0D44_17535 PF00561 alpha/beta hydrolase fold M0D44_17540 PF00440 Bacterial regulatory proteins, tetR family M0D44_17545 PF07715 TonB-dependent Receptor Plug Domain M0D44_17545 PF00593 TonB dependent receptor M0D44_17555 PF01430 Hsp33 protein M0D44_17560 PF00912 Transglycosylase M0D44_17565 PF00535 Glycosyl transferase family 2 M0D44_17570 PF00478 IMP dehydrogenase / GMP reductase domain M0D44_17570 PF00571 CBS domain M0D44_17575 PF05170 AsmA family M0D44_17580 PF03006 Haemolysin-III related M0D44_17585 PF16658 Class II release factor RF3, C-terminal domain M0D44_17585 PF00009 Elongation factor Tu GTP binding domain M0D44_17590 PF01476 LysM domain M0D44_17590 PF08525 Opacity-associated protein A N-terminal motif M0D44_17590 PF01551 Peptidase family M23 M0D44_17595 PF00561 alpha/beta hydrolase fold M0D44_17600 PF01053 Cys/Met metabolism PLP-dependent enzyme M0D44_17605 PF00696 Amino acid kinase family M0D44_17605 PF03447 Homoserine dehydrogenase, NAD binding domain M0D44_17605 PF00742 Homoserine dehydrogenase M0D44_17610 PF12697 Alpha/beta hydrolase family M0D44_17615 PF03313 Serine dehydratase alpha chain M0D44_17615 PF03315 Serine dehydratase beta chain M0D44_17635 PF04264 YceI-like domain M0D44_17640 PF00072 Response regulator receiver domain M0D44_17640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_17640 PF00512 His Kinase A (phospho-acceptor) domain M0D44_17640 PF01627 Hpt domain M0D44_17645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_17645 PF00512 His Kinase A (phospho-acceptor) domain M0D44_17645 PF09308 LuxQ, periplasmic M0D44_17645 PF00072 Response regulator receiver domain M0D44_17650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_17650 PF00512 His Kinase A (phospho-acceptor) domain M0D44_17650 PF09456 RcsC Alpha-Beta-Loop (ABL) M0D44_17650 PF00072 Response regulator receiver domain M0D44_17655 PF17149 Periplasmic sensor domain found in signal transduction proteins M0D44_17655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_17655 PF00512 His Kinase A (phospho-acceptor) domain M0D44_17655 PF01627 Hpt domain M0D44_17655 PF00072 Response regulator receiver domain M0D44_17655 PF00672 HAMP domain M0D44_17660 PF07690 Major Facilitator Superfamily M0D44_17665 PF02954 Bacterial regulatory protein, Fis family M0D44_17665 PF00072 Response regulator receiver domain M0D44_17665 PF00158 Sigma-54 interaction domain M0D44_17735 PF01208 Uroporphyrinogen decarboxylase (URO-D) M0D44_17745 PF01761 3-dehydroquinate synthase M0D44_17750 PF01202 Shikimate kinase M0D44_17755 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region M0D44_17755 PF01243 Pyridoxamine 5'-phosphate oxidase M0D44_17765 PF04012 PspA/IM30 family M0D44_17790 PF03738 Glutathionylspermidine synthase preATP-grasp M0D44_17795 PF07690 Major Facilitator Superfamily M0D44_17800 PF00376 MerR family regulatory protein M0D44_17800 PF09278 MerR, DNA binding M0D44_17830 PF04820 Tryptophan halogenase M0D44_17835 PF12706 Beta-lactamase superfamily domain M0D44_17855 PF00324 Amino acid permease M0D44_17865 PF00561 alpha/beta hydrolase fold M0D44_17870 PF00544 Pectate lyase M0D44_17875 PF00324 Amino acid permease M0D44_17885 PF01654 Cytochrome bd terminal oxidase subunit I M0D44_17890 PF02322 Cytochrome bd terminal oxidase subunit II M0D44_17895 PF00756 Putative esterase M0D44_17900 PF01769 Divalent cation transporter M0D44_17900 PF03448 MgtE intracellular N domain M0D44_17900 PF00571 CBS domain M0D44_17905 PF00391 PEP-utilising enzyme, mobile domain M0D44_17905 PF02896 PEP-utilising enzyme, TIM barrel domain M0D44_17905 PF05524 PEP-utilising enzyme, N-terminal M0D44_17910 PF00381 PTS HPr component phosphorylation site M0D44_17920 PF03668 P-loop ATPase protein family M0D44_17925 PF02603 HPr Serine kinase N terminus M0D44_17925 PF07475 HPr Serine kinase C-terminal domain M0D44_17930 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M0D44_17935 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein M0D44_17940 PF00309 Sigma-54 factor, Activator interacting domain (AID) M0D44_17940 PF04963 Sigma-54 factor, core binding domain M0D44_17940 PF04552 Sigma-54, DNA binding domain M0D44_17945 PF00005 ABC transporter M0D44_17965 PF00571 CBS domain M0D44_17965 PF01380 SIS domain M0D44_17970 PF01722 BolA-like protein M0D44_17975 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M0D44_17995 PF00551 Formyl transferase M0D44_18005 PF02769 AIR synthase related protein, C-terminal domain M0D44_18005 PF00586 AIR synthase related protein, N-terminal domain M0D44_18015 PF01594 AI-2E family transporter M0D44_18020 PF00308 Bacterial dnaA protein M0D44_18030 PF00483 Nucleotidyl transferase M0D44_18035 PF01636 Phosphotransferase enzyme family M0D44_18045 PF01546 Peptidase family M20/M25/M40 M0D44_18045 PF07687 Peptidase dimerisation domain M0D44_18060 PF00175 Oxidoreductase NAD-binding domain M0D44_18060 PF00258 Flavodoxin M0D44_18060 PF00667 FAD binding domain M0D44_18065 PF02424 ApbE family M0D44_18090 PF13640 2OG-Fe(II) oxygenase superfamily M0D44_18090 PF18331 PKHD-type hydroxylase C-terminal domain M0D44_18095 PF07715 TonB-dependent Receptor Plug Domain M0D44_18095 PF00593 TonB dependent receptor M0D44_18100 PF00355 Rieske [2Fe-2S] domain M0D44_18110 PF00266 Aminotransferase class-V M0D44_18115 PF01458 Uncharacterized protein family (UPF0051) M0D44_18120 PF00005 ABC transporter M0D44_18125 PF01458 Uncharacterized protein family (UPF0051) M0D44_18130 PF02082 Transcriptional regulator M0D44_18140 PF01965 DJ-1/PfpI family M0D44_18160 PF01476 LysM domain M0D44_18160 PF01551 Peptidase family M23 M0D44_18175 PF03807 NADP oxidoreductase coenzyme F420-dependent M0D44_18175 PF14748 Pyrroline-5-carboxylate reductase dimerisation M0D44_18180 PF01168 Alanine racemase, N-terminal domain M0D44_18185 PF00437 Type II/IV secretion system protein M0D44_18190 PF00437 Type II/IV secretion system protein M0D44_18205 PF13673 Acetyltransferase (GNAT) domain M0D44_18205 PF13302 Acetyltransferase (GNAT) domain M0D44_18205 PF00958 GMP synthase C terminal domain M0D44_18205 PF00117 Glutamine amidotransferase class-I M0D44_18205 PF03352 Methyladenine glycosylase M0D44_18210 PF13687 Domain of unknown function (DUF4153) M0D44_18215 PF02622 Uncharacterized ACR, COG1678 M0D44_18220 PF03652 Holliday junction resolvase M0D44_18225 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M0D44_18225 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M0D44_18230 PF02566 OsmC-like protein M0D44_18240 PF02567 Phenazine biosynthesis-like protein M0D44_18250 PF00696 Amino acid kinase family M0D44_18250 PF01842 ACT domain M0D44_18265 PF08245 Mur ligase middle domain M0D44_18275 PF00348 Polyprenyl synthetase M0D44_18280 PF00436 Single-strand binding protein family M0D44_18295 PF00732 GMC oxidoreductase M0D44_18295 PF05199 GMC oxidoreductase M0D44_18325 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M0D44_18325 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M0D44_18330 PF03825 Nucleoside H+ symporter M0D44_18340 PF00356 Bacterial regulatory proteins, lacI family M0D44_18345 PF00360 Phytochrome region M0D44_18345 PF00563 EAL domain M0D44_18345 PF01590 GAF domain M0D44_18345 PF00990 Diguanylate cyclase, GGDEF domain M0D44_18350 PF08240 Alcohol dehydrogenase GroES-like domain M0D44_18350 PF00107 Zinc-binding dehydrogenase M0D44_18355 PF00111 2Fe-2S iron-sulfur cluster binding domain M0D44_18355 PF01799 [2Fe-2S] binding domain M0D44_18355 PF10518 TAT (twin-arginine translocation) pathway signal sequence M0D44_18360 PF00941 FAD binding domain in molybdopterin dehydrogenase M0D44_18360 PF03450 CO dehydrogenase flavoprotein C-terminal domain M0D44_18365 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain M0D44_18365 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase M0D44_18370 PF13478 XdhC Rossmann domain M0D44_18370 PF02625 XdhC and CoxI family M0D44_18405 PF04328 Selenoprotein, putative M0D44_18410 PF02554 Carbon starvation protein CstA M0D44_18410 PF13722 5TM C-terminal transporter carbon starvation CstA M0D44_18415 PF02678 Pirin M0D44_18415 PF05726 Pirin C-terminal cupin domain M0D44_18430 PF05726 Pirin C-terminal cupin domain M0D44_18430 PF02678 Pirin M0D44_18435 PF04493 Endonuclease V M0D44_18440 PF00300 Histidine phosphatase superfamily (branch 1) M0D44_18450 PF05649 Peptidase family M13 M0D44_18450 PF01431 Peptidase family M13 M0D44_18455 PF13091 PLD-like domain M0D44_18460 PF01339 CheB methylesterase M0D44_18460 PF00072 Response regulator receiver domain M0D44_18465 PF03705 CheR methyltransferase, all-alpha domain M0D44_18465 PF01739 CheR methyltransferase, SAM binding domain M0D44_18470 PF00563 EAL domain M0D44_18470 PF00990 Diguanylate cyclase, GGDEF domain M0D44_18470 PF13426 PAS domain M0D44_18475 PF01584 CheW-like domain M0D44_18480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0D44_18480 PF00672 HAMP domain M0D44_18485 PF02895 Signal transducing histidine kinase, homodimeric domain M0D44_18485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_18485 PF01627 Hpt domain M0D44_18485 PF01584 CheW-like domain M0D44_18485 PF09078 CheY binding M0D44_18490 PF01740 STAS domain M0D44_18495 PF02559 CarD-like/TRCF domain M0D44_18495 PF00270 DEAD/DEAH box helicase M0D44_18495 PF00271 Helicase conserved C-terminal domain M0D44_18495 PF03461 TRCF domain M0D44_18495 PF17757 UvrB interaction domain M0D44_18505 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ M0D44_18510 PF00072 Response regulator receiver domain M0D44_18510 PF00486 Transcriptional regulatory protein, C terminal M0D44_18520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_18520 PF00672 HAMP domain M0D44_18520 PF00512 His Kinase A (phospho-acceptor) domain M0D44_18530 PF06123 Inner membrane protein CreD M0D44_18545 PF00795 Carbon-nitrogen hydrolase M0D44_18555 PF00749 tRNA synthetases class I (E and Q), catalytic domain M0D44_18560 PF01475 Ferric uptake regulator family M0D44_18570 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M0D44_18570 PF00529 HlyD membrane-fusion protein of T1SS M0D44_18575 PF00873 AcrB/AcrD/AcrF family M0D44_18580 PF02321 Outer membrane efflux protein M0D44_18585 PF16859 Tetracyclin repressor-like, C-terminal domain M0D44_18585 PF00440 Bacterial regulatory proteins, tetR family M0D44_18595 PF06719 AraC-type transcriptional regulator N-terminus M0D44_18595 PF12833 Helix-turn-helix domain M0D44_18610 PF03466 LysR substrate binding domain M0D44_18610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D44_18615 PF07690 Major Facilitator Superfamily M0D44_18620 PF00248 Aldo/keto reductase family M0D44_18630 PF00082 Subtilase family M0D44_18630 PF01483 Proprotein convertase P-domain M0D44_18640 PF07715 TonB-dependent Receptor Plug Domain M0D44_18640 PF00593 TonB dependent receptor M0D44_18655 PF00654 Voltage gated chloride channel M0D44_18665 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M0D44_18665 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M0D44_18710 PF04542 Sigma-70 region 2 M0D44_18710 PF04539 Sigma-70 region 3 M0D44_18710 PF04545 Sigma-70, region 4 M0D44_18715 PF03880 DbpA RNA binding domain M0D44_18715 PF00270 DEAD/DEAH box helicase M0D44_18715 PF00271 Helicase conserved C-terminal domain M0D44_18720 PF00563 EAL domain M0D44_18720 PF00990 Diguanylate cyclase, GGDEF domain M0D44_18720 PF08448 PAS fold M0D44_18725 PF01479 S4 domain M0D44_18725 PF00849 RNA pseudouridylate synthase M0D44_18730 PF00990 Diguanylate cyclase, GGDEF domain M0D44_18750 PF03737 Aldolase/RraA M0D44_18755 PF00144 Beta-lactamase M0D44_18755 PF07930 D-aminopeptidase, domain B M0D44_18760 PF00999 Sodium/hydrogen exchanger family M0D44_18765 PF00672 HAMP domain M0D44_18765 PF00512 His Kinase A (phospho-acceptor) domain M0D44_18765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_18770 PF00072 Response regulator receiver domain M0D44_18770 PF00486 Transcriptional regulatory protein, C terminal M0D44_18775 PF02321 Outer membrane efflux protein M0D44_18780 PF06629 MltA-interacting protein MipA M0D44_18790 PF00873 AcrB/AcrD/AcrF family M0D44_18800 PF00005 ABC transporter M0D44_18800 PF00664 ABC transporter transmembrane region M0D44_18830 PF01022 Bacterial regulatory protein, arsR family M0D44_18835 PF03466 LysR substrate binding domain M0D44_18835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D44_18880 PF00085 Thioredoxin M0D44_18890 PF13603 Leucyl-tRNA synthetase, Domain 2 M0D44_18890 PF00133 tRNA synthetases class I (I, L, M and V) M0D44_18890 PF08264 Anticodon-binding domain of tRNA M0D44_18905 PF01467 Cytidylyltransferase-like M0D44_18920 PF02590 Predicted SPOUT methyltransferase M0D44_18940 PF04402 Protein of unknown function (DUF541) M0D44_18945 PF02545 Maf-like protein M0D44_18950 PF10150 Ribonuclease E/G family M0D44_18950 PF00575 S1 RNA binding domain M0D44_18955 PF13502 AsmA-like C-terminal region M0D44_18955 PF13116 Protein of unknown function M0D44_18965 PF01523 Putative modulator of DNA gyrase M0D44_18970 PF04751 Protein of unknown function (DUF615) M0D44_18975 PF01523 Putative modulator of DNA gyrase M0D44_18985 PF14521 Lysine-specific metallo-endopeptidase M0D44_18990 PF00348 Polyprenyl synthetase M0D44_18995 PF02609 Exonuclease VII small subunit M0D44_19000 PF11734 TilS substrate C-terminal domain M0D44_19000 PF09179 TilS substrate binding domain M0D44_19000 PF01171 PP-loop family M0D44_19005 PF00245 Alkaline phosphatase M0D44_19010 PF00375 Sodium:dicarboxylate symporter family M0D44_19015 PF08241 Methyltransferase domain M0D44_19030 PF00877 NlpC/P60 family M0D44_19035 PF00877 NlpC/P60 family M0D44_19040 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M0D44_19045 PF04235 Protein of unknown function (DUF418) M0D44_19050 PF01266 FAD dependent oxidoreductase M0D44_19055 PF07992 Pyridine nucleotide-disulphide oxidoreductase M0D44_19055 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M0D44_19075 PF05649 Peptidase family M13 M0D44_19075 PF01431 Peptidase family M13 M0D44_19080 PF01431 Peptidase family M13 M0D44_19080 PF05649 Peptidase family M13 M0D44_19100 PF10609 NUBPL iron-transfer P-loop NTPase M0D44_19105 PF00692 dUTPase M0D44_19130 PF01738 Dienelactone hydrolase family M0D44_19135 PF00919 Uncharacterized protein family UPF0004 M0D44_19135 PF18693 TRAM domain M0D44_19135 PF04055 Radical SAM superfamily M0D44_19140 PF03449 Transcription elongation factor, N-terminal M0D44_19140 PF01272 Transcription elongation factor, GreA/GreB, C-term M0D44_19155 PF00293 NUDIX domain M0D44_19165 PF05872 Bacterial protein of unknown function (DUF853) M0D44_19175 PF02666 Phosphatidylserine decarboxylase M0D44_19180 PF02630 SCO1/SenC M0D44_19185 PF05175 Methyltransferase small domain M0D44_19190 PF01264 Chorismate synthase M0D44_19195 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M0D44_19195 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M0D44_19200 PF01118 Semialdehyde dehydrogenase, NAD binding domain M0D44_19200 PF02774 Semialdehyde dehydrogenase, dimerisation domain M0D44_19220 PF01416 tRNA pseudouridine synthase M0D44_19225 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase M0D44_19235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D44_19235 PF03466 LysR substrate binding domain M0D44_19240 PF00291 Pyridoxal-phosphate dependent enzyme M0D44_19250 PF00290 Tryptophan synthase alpha chain M0D44_19255 PF17848 Acetyl-coA carboxylase zinc finger domain M0D44_19255 PF01039 Carboxyl transferase domain M0D44_19260 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M0D44_19260 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M0D44_19260 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M0D44_19260 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M0D44_19275 PF00990 Diguanylate cyclase, GGDEF domain M0D44_19275 PF00563 EAL domain M0D44_19275 PF03707 Bacterial signalling protein N terminal repeat M0D44_19295 PF00121 Triosephosphate isomerase M0D44_19310 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 M0D44_19315 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit M0D44_19320 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit M0D44_19325 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit M0D44_19335 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit M0D44_19335 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region M0D44_19335 PF10531 SLBB domain M0D44_19340 PF00384 Molybdopterin oxidoreductase M0D44_19340 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region M0D44_19340 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal M0D44_19345 PF00146 NADH dehydrogenase M0D44_19350 PF12838 4Fe-4S dicluster domain M0D44_19355 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 M0D44_19360 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L M0D44_19365 PF00361 Proton-conducting membrane transporter M0D44_19365 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M0D44_19370 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus M0D44_19370 PF00361 Proton-conducting membrane transporter M0D44_19375 PF00361 Proton-conducting membrane transporter M0D44_19385 PF17384 RimP C-terminal SH3 domain M0D44_19385 PF02576 RimP N-terminal domain M0D44_19390 PF13184 NusA-like KH domain M0D44_19390 PF08529 NusA N-terminal domain M0D44_19390 PF00575 S1 RNA binding domain M0D44_19395 PF08364 Bacterial translation initiation factor IF-2 associated region M0D44_19395 PF04760 Translation initiation factor IF-2, N-terminal region M0D44_19395 PF00009 Elongation factor Tu GTP binding domain M0D44_19395 PF11987 Translation-initiation factor 2 M0D44_19400 PF02033 Ribosome-binding factor A M0D44_19405 PF01509 TruB family pseudouridylate synthase (N terminal domain) M0D44_19405 PF09157 Pseudouridine synthase II TruB, C-terminal M0D44_19405 PF16198 tRNA pseudouridylate synthase B C-terminal domain M0D44_19410 PF00312 Ribosomal protein S15 M0D44_19415 PF00013 KH domain M0D44_19415 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain M0D44_19415 PF03725 3' exoribonuclease family, domain 2 M0D44_19415 PF00575 S1 RNA binding domain M0D44_19415 PF01138 3' exoribonuclease family, domain 1 M0D44_19425 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain M0D44_19425 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain M0D44_19435 PF00731 AIR carboxylase M0D44_19440 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain M0D44_19440 PF02222 ATP-grasp domain M0D44_19445 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain M0D44_19445 PF02777 Iron/manganese superoxide dismutases, C-terminal domain M0D44_19450 PF00462 Glutaredoxin M0D44_19460 PF01914 MarC family integral membrane protein M0D44_19465 PF00593 TonB dependent receptor M0D44_19470 PF03641 Possible lysine decarboxylase M0D44_19470 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases M0D44_19470 PF11892 Domain of unknown function (DUF3412) M0D44_19475 PF12019 Type II transport protein GspH M0D44_19475 PF07963 Prokaryotic N-terminal methylation motif M0D44_19495 PF05567 Neisseria PilC beta-propeller domain M0D44_19500 PF07963 Prokaryotic N-terminal methylation motif M0D44_19500 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor M0D44_19510 PF00114 Pilin (bacterial filament) M0D44_19510 PF07963 Prokaryotic N-terminal methylation motif M0D44_19515 PF17757 UvrB interaction domain M0D44_19515 PF00271 Helicase conserved C-terminal domain M0D44_19515 PF04851 Type III restriction enzyme, res subunit M0D44_19515 PF02151 UvrB/uvrC motif M0D44_19515 PF12344 Ultra-violet resistance protein B M0D44_19530 PF02534 Type IV secretory system Conjugative DNA transfer M0D44_19550 PF03743 Bacterial conjugation TrbI-like protein M0D44_19555 PF00437 Type II/IV secretion system protein M0D44_19560 PF01464 Transglycosylase SLT domain M0D44_19570 PF05101 Type IV secretory pathway, VirB3-like protein M0D44_19575 PF03135 CagE, TrbE, VirB family, component of type IV transporter system M0D44_19580 PF00128 Alpha amylase, catalytic domain M0D44_19600 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M0D44_19605 PF00128 Alpha amylase, catalytic domain M0D44_19605 PF00686 Starch binding domain M0D44_19610 PF00356 Bacterial regulatory proteins, lacI family M0D44_19615 PF03129 Anticodon binding domain M0D44_19615 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M0D44_19615 PF02824 TGS domain M0D44_19615 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M0D44_19620 PF00707 Translation initiation factor IF-3, C-terminal domain M0D44_19620 PF05198 Translation initiation factor IF-3, N-terminal domain M0D44_19625 PF01632 Ribosomal protein L35 M0D44_19630 PF00453 Ribosomal protein L20 M0D44_19635 PF01409 tRNA synthetases class II core domain (F) M0D44_19635 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain M0D44_19640 PF01588 Putative tRNA binding domain M0D44_19640 PF03483 B3/4 domain M0D44_19640 PF03484 tRNA synthetase B5 domain M0D44_19640 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain M0D44_19640 PF03147 Ferredoxin-fold anticodon binding domain M0D44_19645 PF00216 Bacterial DNA-binding protein M0D44_19650 PF13411 MerR HTH family regulatory protein M0D44_19675 PF02397 Bacterial sugar transferase M0D44_19695 PF13439 Glycosyltransferase Family 4 M0D44_19695 PF00534 Glycosyl transferases group 1 M0D44_19705 PF14667 Polysaccharide biosynthesis C-terminal domain M0D44_19720 PF03808 Glycosyl transferase WecB/TagA/CpsF family M0D44_19735 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M0D44_19735 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M0D44_19745 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family M0D44_19765 PF13292 1-deoxy-D-xylulose-5-phosphate synthase M0D44_19765 PF02779 Transketolase, pyrimidine binding domain M0D44_19765 PF02780 Transketolase, C-terminal domain M0D44_19775 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M0D44_19775 PF12806 Acetyl-CoA dehydrogenase C-terminal like M0D44_19775 PF02770 Acyl-CoA dehydrogenase, middle domain M0D44_19775 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M0D44_19785 PF08212 Lipocalin-like domain M0D44_19820 PF04381 Putative exonuclease, RdgC M0D44_19875 PF13180 PDZ domain M0D44_19920 PF01807 CHC2 zinc finger M0D44_19920 PF10410 DnaB-helicase binding domain of primase M0D44_19920 PF08275 DNA primase catalytic core, N-terminal domain M0D44_19960 PF00574 Clp protease M0D44_20065 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA M0D44_20110 PF00893 Small Multidrug Resistance protein M0D44_20115 PF13426 PAS domain M0D44_20115 PF00072 Response regulator receiver domain M0D44_20115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_20120 PF04362 Bacterial Fe(2+) trafficking M0D44_20125 PF14815 NUDIX domain M0D44_20125 PF00633 Helix-hairpin-helix motif M0D44_20125 PF10576 Iron-sulfur binding domain of endonuclease III M0D44_20125 PF00730 HhH-GPD superfamily base excision DNA repair protein M0D44_20130 PF02881 SRP54-type protein, helical bundle domain M0D44_20130 PF00448 SRP54-type protein, GTPase domain M0D44_20140 PF05544 Proline racemase M0D44_20145 PF01266 FAD dependent oxidoreductase M0D44_20155 PF07992 Pyridine nucleotide-disulphide oxidoreductase M0D44_20155 PF04324 BFD-like [2Fe-2S] binding domain M0D44_20160 PF00701 Dihydrodipicolinate synthetase family M0D44_20165 PF00171 Aldehyde dehydrogenase family M0D44_20170 PF01321 Creatinase/Prolidase N-terminal domain M0D44_20170 PF00557 Metallopeptidase family M24 M0D44_20185 PF13520 Amino acid permease M0D44_20215 PF07715 TonB-dependent Receptor Plug Domain M0D44_20215 PF00593 TonB dependent receptor M0D44_20220 PF07532 Bacterial Ig-like domain (group 4) M0D44_20225 PF07532 Bacterial Ig-like domain (group 4) M0D44_20230 PF00326 Prolyl oligopeptidase family M0D44_20230 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region M0D44_20235 PF00593 TonB dependent receptor M0D44_20235 PF07715 TonB-dependent Receptor Plug Domain M0D44_20250 PF00183 Hsp90 protein M0D44_20250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_20260 PF01467 Cytidylyltransferase-like M0D44_20270 PF00037 4Fe-4S binding domain M0D44_20285 PF02927 Cellulase N-terminal ig-like domain M0D44_20285 PF00759 Glycosyl hydrolase family 9 M0D44_20315 PF00202 Aminotransferase class-III M0D44_20325 PF02547 Queuosine biosynthesis protein M0D44_20330 PF01702 Queuine tRNA-ribosyltransferase M0D44_20335 PF02699 Preprotein translocase subunit M0D44_20340 PF02355 Protein export membrane protein M0D44_20340 PF13721 SecD export protein N-terminal TM region M0D44_20340 PF07549 SecD/SecF GG Motif M0D44_20345 PF07549 SecD/SecF GG Motif M0D44_20345 PF02355 Protein export membrane protein M0D44_20390 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M0D44_20395 PF00294 pfkB family carbohydrate kinase M0D44_20400 PF00381 PTS HPr component phosphorylation site M0D44_20400 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M0D44_20400 PF05524 PEP-utilising enzyme, N-terminal M0D44_20400 PF00391 PEP-utilising enzyme, mobile domain M0D44_20400 PF02896 PEP-utilising enzyme, TIM barrel domain M0D44_20405 PF00356 Bacterial regulatory proteins, lacI family M0D44_20410 PF00873 AcrB/AcrD/AcrF family M0D44_20415 PF00529 HlyD membrane-fusion protein of T1SS M0D44_20415 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M0D44_20425 PF05088 Bacterial NAD-glutamate dehydrogenase M0D44_20475 PF07690 Major Facilitator Superfamily M0D44_20480 PF00072 Response regulator receiver domain M0D44_20485 PF00072 Response regulator receiver domain M0D44_20485 PF01627 Hpt domain M0D44_20485 PF00512 His Kinase A (phospho-acceptor) domain M0D44_20485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_20485 PF00672 HAMP domain M0D44_20485 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M0D44_20490 PF04286 Protein of unknown function (DUF445) M0D44_20500 PF00202 Aminotransferase class-III M0D44_20510 PF07690 Major Facilitator Superfamily M0D44_20515 PF02634 FdhD/NarQ family M0D44_20520 PF00384 Molybdopterin oxidoreductase M0D44_20530 PF07690 Major Facilitator Superfamily M0D44_20530 PF00083 Sugar (and other) transporter M0D44_20535 PF00072 Response regulator receiver domain M0D44_20535 PF00990 Diguanylate cyclase, GGDEF domain M0D44_20540 PF01266 FAD dependent oxidoreductase M0D44_20545 PF00120 Glutamine synthetase, catalytic domain M0D44_20550 PF07722 Peptidase C26 M0D44_20555 PF00120 Glutamine synthetase, catalytic domain M0D44_20560 PF00202 Aminotransferase class-III M0D44_20565 PF13416 Bacterial extracellular solute-binding protein M0D44_20570 PF13533 Biotin-lipoyl like M0D44_20575 PF07690 Major Facilitator Superfamily M0D44_20580 PF02321 Outer membrane efflux protein M0D44_20585 PF08402 TOBE domain M0D44_20585 PF00005 ABC transporter M0D44_20590 PF00528 Binding-protein-dependent transport system inner membrane component M0D44_20595 PF00528 Binding-protein-dependent transport system inner membrane component M0D44_20605 PF00171 Aldehyde dehydrogenase family M0D44_20620 PF00571 CBS domain M0D44_20620 PF03471 Transporter associated domain M0D44_20630 PF02130 Uncharacterized protein family UPF0054 M0D44_20640 PF02562 PhoH-like protein M0D44_20645 PF04055 Radical SAM superfamily M0D44_20645 PF01938 TRAM domain M0D44_20645 PF00919 Uncharacterized protein family UPF0004 M0D44_20660 PF01464 Transglycosylase SLT domain M0D44_20665 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal M0D44_20665 PF00355 Rieske [2Fe-2S] domain M0D44_20670 PF00032 Cytochrome b(C-terminal)/b6/petD M0D44_20670 PF00033 Cytochrome b/b6/petB M0D44_20675 PF02167 Cytochrome C1 family M0D44_20680 PF00043 Glutathione S-transferase, C-terminal domain M0D44_20680 PF02798 Glutathione S-transferase, N-terminal domain M0D44_20685 PF04386 Stringent starvation protein B M0D44_20710 PF00271 Helicase conserved C-terminal domain M0D44_20710 PF08494 DEAD/H associated M0D44_20710 PF00270 DEAD/DEAH box helicase M0D44_20720 PF01584 CheW-like domain M0D44_20750 PF04679 ATP dependent DNA ligase C terminal region M0D44_20750 PF13298 DNA polymerase Ligase (LigD) M0D44_20750 PF01068 ATP dependent DNA ligase domain M0D44_20755 PF00570 HRDC domain M0D44_20755 PF01612 3'-5' exonuclease M0D44_20765 PF03781 Sulfatase-modifying factor enzyme 1 M0D44_20775 PF13742 OB-fold nucleic acid binding domain M0D44_20775 PF02601 Exonuclease VII, large subunit M0D44_20785 PF03853 YjeF-related protein N-terminus M0D44_20785 PF01256 Carbohydrate kinase M0D44_20790 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE M0D44_20795 PF01520 N-acetylmuramoyl-L-alanine amidase M0D44_20795 PF11741 AMIN domain M0D44_20800 PF08676 MutL C terminal dimerisation domain M0D44_20800 PF01119 DNA mismatch repair protein, C-terminal domain M0D44_20815 PF05233 PHB accumulation regulatory domain M0D44_20815 PF07879 PHB/PHA accumulation regulator DNA-binding domain M0D44_20820 PF00106 short chain dehydrogenase M0D44_20825 PF00749 tRNA synthetases class I (E and Q), catalytic domain M0D44_20830 PF01435 Peptidase family M48 M0D44_20835 PF00563 EAL domain M0D44_20835 PF00072 Response regulator receiver domain M0D44_20835 PF00990 Diguanylate cyclase, GGDEF domain M0D44_20845 PF07152 YaeQ protein M0D44_20850 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 M0D44_20855 PF00313 'Cold-shock' DNA-binding domain M0D44_20860 PF02798 Glutathione S-transferase, N-terminal domain M0D44_20860 PF14497 Glutathione S-transferase, C-terminal domain M0D44_20870 PF02696 Uncharacterized ACR, YdiU/UPF0061 family M0D44_20875 PF00156 Phosphoribosyl transferase domain M0D44_20880 PF03880 DbpA RNA binding domain M0D44_20880 PF00270 DEAD/DEAH box helicase M0D44_20880 PF00271 Helicase conserved C-terminal domain M0D44_20885 PF16326 ABC transporter C-terminal domain M0D44_20885 PF12848 ABC transporter M0D44_20885 PF00005 ABC transporter M0D44_20895 PF00545 ribonuclease M0D44_20900 PF02777 Iron/manganese superoxide dismutases, C-terminal domain M0D44_20900 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain M0D44_20905 PF00459 Inositol monophosphatase family M0D44_20920 PF13188 PAS domain M0D44_20920 PF00563 EAL domain M0D44_20920 PF03707 Bacterial signalling protein N terminal repeat M0D44_20920 PF00990 Diguanylate cyclase, GGDEF domain M0D44_20925 PF04055 Radical SAM superfamily M0D44_20930 PF01132 Elongation factor P (EF-P) OB domain M0D44_20930 PF08207 Elongation factor P (EF-P) KOW-like domain M0D44_20930 PF09285 Elongation factor P, C-terminal M0D44_20940 PF01979 Amidohydrolase family M0D44_20950 PF13419 Haloacid dehalogenase-like hydrolase M0D44_20960 PF00295 Glycosyl hydrolases family 28 M0D44_20965 PF01095 Pectinesterase M0D44_20985 PF05985 Ethanolamine ammonia-lyase light chain (EutC) M0D44_20990 PF06751 Ethanolamine ammonia lyase large subunit (EutB) M0D44_21000 PF08460 Bacterial SH3 domain M0D44_21000 PF01551 Peptidase family M23 M0D44_21005 PF01979 Amidohydrolase family M0D44_21010 PF01809 Putative membrane protein insertion efficiency factor M0D44_21020 PF01258 Prokaryotic dksA/traR C4-type zinc finger M0D44_21035 PF02657 Fe-S metabolism associated domain M0D44_21040 PF09190 DALR domain M0D44_21040 PF01406 tRNA synthetases class I (C) catalytic domain M0D44_21050 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M0D44_21050 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M0D44_21055 PF00764 Arginosuccinate synthase M0D44_21060 PF07687 Peptidase dimerisation domain M0D44_21060 PF01546 Peptidase family M20/M25/M40 M0D44_21065 PF00696 Amino acid kinase family M0D44_21065 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase M0D44_21075 PF01118 Semialdehyde dehydrogenase, NAD binding domain M0D44_21080 PF00206 Lyase M0D44_21105 PF01472 PUA domain M0D44_21105 PF00696 Amino acid kinase family M0D44_21110 PF00171 Aldehyde dehydrogenase family M0D44_21125 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain M0D44_21125 PF02129 X-Pro dipeptidyl-peptidase (S15 family) M0D44_21145 PF02322 Cytochrome bd terminal oxidase subunit II M0D44_21150 PF01654 Cytochrome bd terminal oxidase subunit I M0D44_21155 PF00664 ABC transporter transmembrane region M0D44_21155 PF00005 ABC transporter M0D44_21160 PF00005 ABC transporter M0D44_21160 PF00664 ABC transporter transmembrane region M0D44_21170 PF00313 'Cold-shock' DNA-binding domain M0D44_21175 PF00561 alpha/beta hydrolase fold M0D44_21185 PF03918 Cytochrome C biogenesis protein M0D44_21190 PF08534 Redoxin M0D44_21195 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal M0D44_21195 PF01578 Cytochrome C assembly protein M0D44_21200 PF03100 CcmE M0D44_21210 PF01578 Cytochrome C assembly protein M0D44_21215 PF03379 CcmB protein M0D44_21220 PF00005 ABC transporter M0D44_21225 PF00155 Aminotransferase class I and II M0D44_21230 PF00795 Carbon-nitrogen hydrolase M0D44_21245 PF00849 RNA pseudouridylate synthase M0D44_21245 PF01479 S4 domain M0D44_21250 PF04079 Segregation and condensation complex subunit ScpB M0D44_21255 PF02616 Segregation and condensation protein ScpA M0D44_21260 PF03795 YCII-related domain M0D44_21270 PF00356 Bacterial regulatory proteins, lacI family M0D44_21290 PF00528 Binding-protein-dependent transport system inner membrane component M0D44_21295 PF00528 Binding-protein-dependent transport system inner membrane component M0D44_21320 PF00795 Carbon-nitrogen hydrolase M0D44_21325 PF04371 Porphyromonas-type peptidyl-arginine deiminase M0D44_21335 PF00444 Ribosomal protein L36 M0D44_21340 PF02224 Cytidylate kinase M0D44_21345 PF00575 S1 RNA binding domain M0D44_21350 PF00216 Bacterial DNA-binding protein M0D44_21360 PF18073 Rubredoxin metal binding domain M0D44_21365 PF00953 Glycosyl transferase family 4 M0D44_21370 PF02719 Polysaccharide biosynthesis protein M0D44_21375 PF00483 Nucleotidyl transferase M0D44_21380 PF00999 Sodium/hydrogen exchanger family M0D44_21380 PF02254 TrkA-N domain M0D44_21390 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain M0D44_21390 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain M0D44_21395 PF00571 CBS domain M0D44_21395 PF00478 IMP dehydrogenase / GMP reductase domain M0D44_21400 PF02540 NAD synthase M0D44_21400 PF00958 GMP synthase C terminal domain M0D44_21400 PF00117 Glutamine amidotransferase class-I M0D44_21410 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) M0D44_21415 PF00361 Proton-conducting membrane transporter M0D44_21415 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus M0D44_21415 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M0D44_21420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D44_21420 PF03466 LysR substrate binding domain M0D44_21425 PF03466 LysR substrate binding domain M0D44_21425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D44_21430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D44_21430 PF03466 LysR substrate binding domain M0D44_21470 PF00072 Response regulator receiver domain M0D44_21470 PF00196 Bacterial regulatory proteins, luxR family M0D44_21485 PF00857 Isochorismatase family M0D44_21495 PF07969 Amidohydrolase family M0D44_21500 PF05977 Transmembrane secretion effector M0D44_21510 PF00561 alpha/beta hydrolase fold M0D44_21515 PF01566 Natural resistance-associated macrophage protein M0D44_21520 PF01325 Iron dependent repressor, N-terminal DNA binding domain M0D44_21520 PF02742 Iron dependent repressor, metal binding and dimerisation domain M0D44_21525 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M0D44_21530 PF00929 Exonuclease M0D44_21535 PF00924 Mechanosensitive ion channel M0D44_21535 PF05552 Conserved TM helix M0D44_21540 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain M0D44_21540 PF00391 PEP-utilising enzyme, mobile domain M0D44_21540 PF02896 PEP-utilising enzyme, TIM barrel domain M0D44_21545 PF03618 Kinase/pyrophosphorylase M0D44_21565 PF01066 CDP-alcohol phosphatidyltransferase M0D44_21575 PF00561 alpha/beta hydrolase fold M0D44_21590 PF01266 FAD dependent oxidoreductase M0D44_21590 PF00355 Rieske [2Fe-2S] domain M0D44_21600 PF17674 HHH domain M0D44_21600 PF00575 S1 RNA binding domain M0D44_21600 PF09371 Tex-like protein N-terminal domain M0D44_21600 PF16921 Tex protein YqgF-like domain M0D44_21605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_21605 PF00512 His Kinase A (phospho-acceptor) domain M0D44_21605 PF01627 Hpt domain M0D44_21605 PF00072 Response regulator receiver domain M0D44_21605 PF00672 HAMP domain M0D44_21605 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M0D44_21645 PF00034 Cytochrome c M0D44_21655 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M0D44_21660 PF00873 AcrB/AcrD/AcrF family M0D44_21665 PF00873 AcrB/AcrD/AcrF family M0D44_21670 PF01081 KDPG and KHG aldolase M0D44_21675 PF00920 Dehydratase family M0D44_21680 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase M0D44_21685 PF02685 Glucokinase M0D44_21690 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain M0D44_21690 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain M0D44_21695 PF17912 MalK OB fold domain M0D44_21695 PF00005 ABC transporter M0D44_21715 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M0D44_21720 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M0D44_21725 PF02910 Fumarate reductase flavoprotein C-term M0D44_21725 PF00890 FAD binding domain M0D44_21735 PF13085 2Fe-2S iron-sulfur cluster binding domain M0D44_21740 PF03937 Flavinator of succinate dehydrogenase M0D44_21750 PF12704 MacB-like periplasmic core domain M0D44_21750 PF02687 FtsX-like permease family M0D44_21755 PF00005 ABC transporter M0D44_21770 PF01618 MotA/TolQ/ExbB proton channel family M0D44_21780 PF00005 ABC transporter M0D44_21780 PF00664 ABC transporter transmembrane region M0D44_21785 PF02606 Tetraacyldisaccharide-1-P 4'-kinase M0D44_21790 PF02348 Cytidylyltransferase M0D44_21795 PF01451 Low molecular weight phosphotyrosine protein phosphatase M0D44_21805 PF01541 GIY-YIG catalytic domain M0D44_21805 PF08459 UvrC Helix-hairpin-helix N-terminal M0D44_21805 PF02151 UvrB/uvrC motif M0D44_21810 PF01066 CDP-alcohol phosphatidyltransferase M0D44_21820 PF00589 Phage integrase family M0D44_21820 PF13356 Arm DNA-binding domain M0D44_21830 PF01381 Helix-turn-helix M0D44_21835 PF03466 LysR substrate binding domain M0D44_21835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D44_21845 PF05598 Transposase domain (DUF772) M0D44_21850 PF13676 TIR domain M0D44_21885 PF04610 TrbL/VirB6 plasmid conjugal transfer protein M0D44_21910 PF04610 TrbL/VirB6 plasmid conjugal transfer protein M0D44_21965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D44_21965 PF03466 LysR substrate binding domain M0D44_21975 PF00501 AMP-binding enzyme M0D44_21975 PF13193 AMP-binding enzyme C-terminal domain M0D44_21975 PF00668 Condensation domain M0D44_21975 PF00550 Phosphopantetheine attachment site M0D44_21980 PF00106 short chain dehydrogenase M0D44_22025 PF07690 Major Facilitator Superfamily M0D44_22035 PF09297 NADH pyrophosphatase zinc ribbon domain M0D44_22035 PF00293 NUDIX domain M0D44_22040 PF00132 Bacterial transferase hexapeptide (six repeats) M0D44_22050 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M0D44_22050 PF02770 Acyl-CoA dehydrogenase, middle domain M0D44_22050 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M0D44_22070 PF07690 Major Facilitator Superfamily M0D44_22075 PF03466 LysR substrate binding domain M0D44_22075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D44_22170 PF00580 UvrD/REP helicase N-terminal domain M0D44_22170 PF13361 UvrD-like helicase C-terminal domain M0D44_22250 PF02021 Uncharacterised protein family UPF0102 M0D44_22265 PF00145 C-5 cytosine-specific DNA methylase M0D44_22270 PF01131 DNA topoisomerase M0D44_22270 PF01751 Toprim domain M0D44_22275 PF00436 Single-strand binding protein family M0D44_22310 PF13614 AAA domain M0D44_22335 PF00145 C-5 cytosine-specific DNA methylase M0D44_22340 PF18339 RapA N-terminal Tudor like domain 1 M0D44_22340 PF18337 RapA N-terminal Tudor like domain M0D44_22340 PF00176 SNF2 family N-terminal domain M0D44_22340 PF12137 RNA polymerase recycling family C-terminal M0D44_22340 PF00271 Helicase conserved C-terminal domain M0D44_22410 PF00550 Phosphopantetheine attachment site M0D44_22410 PF00501 AMP-binding enzyme M0D44_22410 PF13193 AMP-binding enzyme C-terminal domain M0D44_22410 PF00668 Condensation domain M0D44_22410 PF00975 Thioesterase domain M0D44_22415 PF00550 Phosphopantetheine attachment site M0D44_22415 PF07993 Male sterility protein M0D44_22415 PF00501 AMP-binding enzyme M0D44_22415 PF00668 Condensation domain M0D44_22415 PF13193 AMP-binding enzyme C-terminal domain M0D44_22420 PF17837 4'-phosphopantetheinyl transferase N-terminal domain M0D44_22420 PF01648 4'-phosphopantetheinyl transferase superfamily M0D44_22430 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M0D44_22430 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M0D44_22430 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M0D44_22440 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M0D44_22450 PF00581 Rhodanese-like domain M0D44_22450 PF17773 UPF0176 acylphosphatase like domain M0D44_22455 PF00196 Bacterial regulatory proteins, luxR family M0D44_22455 PF00072 Response regulator receiver domain M0D44_22460 PF12111 Polyribonucleotide phosphorylase C terminal M0D44_22460 PF10150 Ribonuclease E/G family M0D44_22460 PF00575 S1 RNA binding domain M0D44_22465 PF00849 RNA pseudouridylate synthase M0D44_22465 PF01479 S4 domain M0D44_22470 PF11737 Protein of unknown function (DUF3300) M0D44_22475 PF02535 ZIP Zinc transporter M0D44_22485 PF01329 Pterin 4 alpha carbinolamine dehydratase M0D44_22490 PF01106 NifU-like domain M0D44_22505 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 M0D44_22510 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath M0D44_22515 PF05638 Type VI secretion system effector, Hcp M0D44_22520 PF07024 ImpE protein M0D44_22525 PF04965 Gene 25-like lysozyme M0D44_22530 PF05947 Type VI secretion system, TssF M0D44_22540 PF00004 ATPase family associated with various cellular activities (AAA) M0D44_22540 PF07724 AAA domain (Cdc48 subfamily) M0D44_22540 PF17871 AAA lid domain M0D44_22540 PF10431 C-terminal, D2-small domain, of ClpB protein M0D44_22555 PF06715 Gp5 C-terminal repeat (3 copies) M0D44_22555 PF04717 Type VI secretion system, phage-baseplate injector M0D44_22570 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE M0D44_22580 PF06744 Type VI secretion protein IcmF C-terminal M0D44_22580 PF06761 Intracellular multiplication and human macrophage-killing M0D44_22580 PF14331 ImcF-related N-terminal domain M0D44_22595 PF00069 Protein kinase domain M0D44_22605 PF06812 ImpA, N-terminal, type VI secretion system M0D44_22610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0D44_22610 PF03466 LysR substrate binding domain M0D44_22615 PF00512 His Kinase A (phospho-acceptor) domain M0D44_22615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0D44_22620 PF03150 Di-haem cytochrome c peroxidase M0D44_22620 PF00034 Cytochrome c M0D44_22625 PF00072 Response regulator receiver domain M0D44_22625 PF00486 Transcriptional regulatory protein, C terminal M0D44_22645 PF00529 HlyD membrane-fusion protein of T1SS M0D44_22645 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M0D44_22650 PF00873 AcrB/AcrD/AcrF family M0D44_22655 PF00440 Bacterial regulatory proteins, tetR family M0D44_22655 PF18665 Tetracyclin repressor-like, C-terminal domain M0D44_22675 PF00732 GMC oxidoreductase M0D44_22675 PF05199 GMC oxidoreductase M0D44_22680 PF00106 short chain dehydrogenase M0D44_22690 PF02810 SEC-C motif M0D44_22690 PF07516 SecA Wing and Scaffold domain M0D44_22690 PF07517 SecA DEAD-like domain M0D44_22690 PF01043 SecA preprotein cross-linking domain M0D44_22705 PF07516 SecA Wing and Scaffold domain M0D44_22705 PF01043 SecA preprotein cross-linking domain M0D44_22705 PF07517 SecA DEAD-like domain M0D44_22705 PF02810 SEC-C motif M0D44_22720 PF02810 SEC-C motif M0D44_22720 PF07516 SecA Wing and Scaffold domain M0D44_22720 PF01043 SecA preprotein cross-linking domain M0D44_22720 PF07517 SecA DEAD-like domain M0D44_22740 PF12706 Beta-lactamase superfamily domain M0D44_22740 PF18456 Diiron non-heme beta-hydroxylase N-terminal domain M0D44_22745 PF18456 Diiron non-heme beta-hydroxylase N-terminal domain M0D44_22745 PF12706 Beta-lactamase superfamily domain M0D44_22750 PF18456 Diiron non-heme beta-hydroxylase N-terminal domain M0D44_22750 PF12706 Beta-lactamase superfamily domain M0D44_22755 PF03621 MbtH-like protein M0D44_22760 PF00664 ABC transporter transmembrane region M0D44_22760 PF00005 ABC transporter M0D44_22765 PF00378 Enoyl-CoA hydratase/isomerase M0D44_22770 PF00155 Aminotransferase class I and II M0D44_22775 PF00378 Enoyl-CoA hydratase/isomerase M0D44_22785 PF00195 Chalcone and stilbene synthases, N-terminal domain M0D44_22785 PF02797 Chalcone and stilbene synthases, C-terminal domain M0D44_22790 PF00501 AMP-binding enzyme M0D44_22790 PF13193 AMP-binding enzyme C-terminal domain M0D44_22790 PF00668 Condensation domain M0D44_22790 PF00550 Phosphopantetheine attachment site M0D44_22790 PF00975 Thioesterase domain M0D44_22795 PF00501 AMP-binding enzyme M0D44_22795 PF13193 AMP-binding enzyme C-terminal domain M0D44_22795 PF00668 Condensation domain M0D44_22795 PF00550 Phosphopantetheine attachment site M0D44_22795 PF00975 Thioesterase domain M0D44_22800 PF00975 Thioesterase domain M0D44_22800 PF00550 Phosphopantetheine attachment site M0D44_22800 PF00501 AMP-binding enzyme M0D44_22800 PF13193 AMP-binding enzyme C-terminal domain M0D44_22800 PF00668 Condensation domain M0D44_22805 PF00501 AMP-binding enzyme M0D44_22805 PF13193 AMP-binding enzyme C-terminal domain M0D44_22805 PF00668 Condensation domain M0D44_22805 PF00550 Phosphopantetheine attachment site M0D44_22805 PF00975 Thioesterase domain