locus-tag class description NG829_00005 PF00308 Bacterial dnaA protein NG829_00005 PF08299 Bacterial dnaA protein helix-turn-helix NG829_00005 PF11638 DnaA N-terminal domain NG829_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain NG829_00010 PF02767 DNA polymerase III beta subunit, central domain NG829_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain NG829_00015 PF02463 RecF/RecN/SMC N terminal domain NG829_00020 PF01751 Toprim domain NG829_00020 PF18053 DNA gyrase B subunit insert domain NG829_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG829_00020 PF00204 DNA gyrase B NG829_00020 PF00986 DNA gyrase B subunit, carboxyl terminus NG829_00025 PF02517 CPBP intramembrane metalloprotease NG829_00030 PF01435 Peptidase family M48 NG829_00040 PF03544 Gram-negative bacterial TonB protein C-terminal NG829_00045 PF01618 MotA/TolQ/ExbB proton channel family NG829_00050 PF02472 Biopolymer transport protein ExbD/TolR NG829_00055 PF02472 Biopolymer transport protein ExbD/TolR NG829_00060 PF02472 Biopolymer transport protein ExbD/TolR NG829_00065 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ NG829_00075 PF13396 Phospholipase_D-nuclease N-terminal NG829_00075 PF13091 PLD-like domain NG829_00085 PF04055 Radical SAM superfamily NG829_00095 PF03358 NADPH-dependent FMN reductase NG829_00110 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain NG829_00115 PF00155 Aminotransferase class I and II NG829_00120 PF07715 TonB-dependent Receptor Plug Domain NG829_00120 PF00593 TonB dependent receptor NG829_00140 PF00158 Sigma-54 interaction domain NG829_00140 PF01590 GAF domain NG829_00140 PF02954 Bacterial regulatory protein, Fis family NG829_00145 PF00171 Aldehyde dehydrogenase family NG829_00150 PF00107 Zinc-binding dehydrogenase NG829_00150 PF08240 Alcohol dehydrogenase GroES-like domain NG829_00175 PF02735 Ku70/Ku80 beta-barrel domain NG829_00180 PF01070 FMN-dependent dehydrogenase NG829_00185 PF07729 FCD domain NG829_00185 PF00392 Bacterial regulatory proteins, gntR family NG829_00200 PF07730 Histidine kinase NG829_00205 PF00072 Response regulator receiver domain NG829_00205 PF00196 Bacterial regulatory proteins, luxR family NG829_00210 PF12241 Trans-2-enoyl-CoA reductase catalytic region NG829_00210 PF07055 Enoyl reductase FAD binding domain NG829_00210 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase NG829_00245 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NG829_00280 PF01965 DJ-1/PfpI family NG829_00345 PF07715 TonB-dependent Receptor Plug Domain NG829_00345 PF00593 TonB dependent receptor NG829_00355 PF07715 TonB-dependent Receptor Plug Domain NG829_00380 PF00135 Carboxylesterase family NG829_00385 PF13472 GDSL-like Lipase/Acylhydrolase family NG829_00385 PF07859 alpha/beta hydrolase fold NG829_00395 PF03480 Bacterial extracellular solute-binding protein, family 7 NG829_00405 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component NG829_00410 PF00356 Bacterial regulatory proteins, lacI family NG829_00420 PF04962 KduI/IolB family NG829_00435 PF00657 GDSL-like Lipase/Acylhydrolase NG829_00445 PF00351 Biopterin-dependent aromatic amino acid hydroxylase NG829_00450 PF01037 Lrp/AsnC ligand binding domain NG829_00455 PF07660 Secretin and TonB N terminus short domain NG829_00455 PF00593 TonB dependent receptor NG829_00455 PF07715 TonB-dependent Receptor Plug Domain NG829_00470 PF01734 Patatin-like phospholipase NG829_00480 PF01569 PAP2 superfamily NG829_00490 PF03741 Integral membrane protein TerC family NG829_00495 PF10672 S-adenosylmethionine-dependent methyltransferase NG829_00495 PF17785 PUA-like domain NG829_00500 PF02595 Glycerate kinase family NG829_00515 PF13520 Amino acid permease NG829_00520 PF00072 Response regulator receiver domain NG829_00520 PF00196 Bacterial regulatory proteins, luxR family NG829_00525 PF00512 His Kinase A (phospho-acceptor) domain NG829_00525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG829_00525 PF13493 Domain of unknown function (DUF4118) NG829_00525 PF13426 PAS domain NG829_00525 PF00989 PAS fold NG829_00525 PF08447 PAS fold NG829_00530 PF02308 MgtC family NG829_00540 PF02646 RmuC family NG829_00545 PF00255 Glutathione peroxidase NG829_00560 PF04333 MlaA lipoprotein NG829_00575 PF02470 MlaD protein NG829_00580 PF02405 Permease MlaE NG829_00585 PF00005 ABC transporter NG829_00625 PF17946 RecC C-terminal domain NG829_00630 PF00580 UvrD/REP helicase N-terminal domain NG829_00630 PF13361 UvrD-like helicase C-terminal domain NG829_00630 PF12705 PD-(D/E)XK nuclease superfamily NG829_00640 PF13538 UvrD-like helicase C-terminal domain NG829_00715 PF00672 HAMP domain NG829_00715 PF02203 Tar ligand binding domain homologue NG829_00715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG829_00725 PF00083 Sugar (and other) transporter NG829_00730 PF01227 GTP cyclohydrolase I NG829_00755 PF02810 SEC-C motif NG829_00760 PF13406 Transglycosylase SLT domain NG829_00765 PF07690 Major Facilitator Superfamily NG829_00770 PF01126 Heme oxygenase NG829_00775 PF01590 GAF domain NG829_00775 PF08446 PAS fold NG829_00775 PF13426 PAS domain NG829_00775 PF00360 Phytochrome region NG829_00780 PF03594 Benzoate membrane transport protein NG829_00820 PF02142 MGS-like domain NG829_00825 PF00150 Cellulase (glycosyl hydrolase family 5) NG829_00830 PF00150 Cellulase (glycosyl hydrolase family 5) NG829_00835 PF00150 Cellulase (glycosyl hydrolase family 5) NG829_00845 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NG829_00845 PF07992 Pyridine nucleotide-disulphide oxidoreductase NG829_00850 PF01493 GXGXG motif NG829_00850 PF00310 Glutamine amidotransferases class-II NG829_00850 PF01645 Conserved region in glutamate synthase NG829_00850 PF04898 Glutamate synthase central domain NG829_00880 PF04679 ATP dependent DNA ligase C terminal region NG829_00880 PF13298 DNA polymerase Ligase (LigD) NG829_00880 PF01068 ATP dependent DNA ligase domain NG829_00910 PF09369 Domain of unknown function (DUF1998) NG829_00910 PF00271 Helicase conserved C-terminal domain NG829_00910 PF00270 DEAD/DEAH box helicase NG829_00925 PF03006 Haemolysin-III related NG829_00955 PF00083 Sugar (and other) transporter NG829_01005 PF01434 Peptidase family M41 NG829_01005 PF00004 ATPase family associated with various cellular activities (AAA) NG829_01005 PF17862 AAA+ lid domain NG829_01010 PF13614 AAA domain NG829_01025 PF13091 PLD-like domain NG829_01030 PF03061 Thioesterase superfamily NG829_01055 PF02673 Bacitracin resistance protein BacA NG829_01060 PF00120 Glutamine synthetase, catalytic domain NG829_01060 PF03951 Glutamine synthetase, beta-Grasp domain NG829_01065 PF00543 Nitrogen regulatory protein P-II NG829_01070 PF00909 Ammonium Transporter Family NG829_01075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG829_01075 PF00512 His Kinase A (phospho-acceptor) domain NG829_01075 PF00989 PAS fold NG829_01080 PF02954 Bacterial regulatory protein, Fis family NG829_01080 PF00072 Response regulator receiver domain NG829_01080 PF00158 Sigma-54 interaction domain NG829_01085 PF00080 Copper/zinc superoxide dismutase (SODC) NG829_01090 PF00080 Copper/zinc superoxide dismutase (SODC) NG829_01100 PF02803 Thiolase, C-terminal domain NG829_01100 PF00108 Thiolase, N-terminal domain NG829_01125 PF00583 Acetyltransferase (GNAT) family NG829_01125 PF09500 Putative thioesterase (yiiD_Cterm) NG829_01140 PF02556 Preprotein translocase subunit SecB NG829_01145 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NG829_01145 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NG829_01150 PF02384 N-6 DNA Methylase NG829_01175 PF00440 Bacterial regulatory proteins, tetR family NG829_01185 PF00588 SpoU rRNA Methylase family NG829_01195 PF00675 Insulinase (Peptidase family M16) NG829_01195 PF05193 Peptidase M16 inactive domain NG829_01205 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NG829_01205 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NG829_01210 PF02661 Fic/DOC family NG829_01210 PF13784 Fic/DOC family N-terminal NG829_01215 PF00561 alpha/beta hydrolase fold NG829_01225 PF03692 Putative zinc- or iron-chelating domain NG829_01230 PF00501 AMP-binding enzyme NG829_01235 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family NG829_01255 PF03109 ABC1 family NG829_01260 PF01596 O-methyltransferase NG829_01265 PF00849 RNA pseudouridylate synthase NG829_01285 PF00472 RF-1 domain NG829_01295 PF07715 TonB-dependent Receptor Plug Domain NG829_01295 PF00593 TonB dependent receptor NG829_01305 PF04542 Sigma-70 region 2 NG829_01305 PF08281 Sigma-70, region 4 NG829_01315 PF01112 Asparaginase NG829_01320 PF01432 Peptidase family M3 NG829_01335 PF10502 Signal peptidase, peptidase S26 NG829_01345 PF12833 Helix-turn-helix domain NG829_01350 PF03466 LysR substrate binding domain NG829_01350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NG829_01355 PF01274 Malate synthase NG829_01360 PF00463 Isocitrate lyase family NG829_01365 PF00990 Diguanylate cyclase, GGDEF domain NG829_01365 PF08448 PAS fold NG829_01390 PF00916 Sulfate permease family NG829_01390 PF01740 STAS domain NG829_01420 PF00378 Enoyl-CoA hydratase/isomerase NG829_01425 PF00501 AMP-binding enzyme NG829_01435 PF07690 Major Facilitator Superfamily NG829_01455 PF00171 Aldehyde dehydrogenase family NG829_01465 PF01494 FAD binding domain NG829_01475 PF00970 Oxidoreductase FAD-binding domain NG829_01475 PF00111 2Fe-2S iron-sulfur cluster binding domain NG829_01485 PF00355 Rieske [2Fe-2S] domain NG829_01490 PF01144 Coenzyme A transferase NG829_01495 PF01144 Coenzyme A transferase NG829_01500 PF00108 Thiolase, N-terminal domain NG829_01500 PF02803 Thiolase, C-terminal domain NG829_01505 PF00775 Dioxygenase NG829_01505 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal NG829_01510 PF00775 Dioxygenase NG829_01510 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal NG829_01515 PF10397 Adenylosuccinate lyase C-terminus NG829_01515 PF00206 Lyase NG829_01520 PF12146 Serine aminopeptidase, S33 NG829_01525 PF02627 Carboxymuconolactone decarboxylase family NG829_01530 PF09339 IclR helix-turn-helix domain NG829_01530 PF01614 Bacterial transcriptional regulator NG829_01535 PF16884 N-terminal domain of oxidoreductase NG829_01535 PF00107 Zinc-binding dehydrogenase NG829_01540 PF00248 Aldo/keto reductase family NG829_01550 PF00849 RNA pseudouridylate synthase NG829_01560 PF00270 DEAD/DEAH box helicase NG829_01560 PF04408 Helicase associated domain (HA2) NG829_01560 PF08482 ATP-dependent helicase C-terminal NG829_01560 PF00271 Helicase conserved C-terminal domain NG829_01565 PF01026 TatD related DNase NG829_01605 PF00437 Type II/IV secretion system protein NG829_01610 PF00263 Bacterial type II and III secretion system protein NG829_01610 PF03958 Bacterial type II/III secretion system short domain NG829_01650 PF04972 BON domain NG829_01650 PF00691 OmpA family NG829_01660 PF01061 ABC-2 type transporter NG829_01665 PF00005 ABC transporter NG829_01670 PF00175 Oxidoreductase NAD-binding domain NG829_01670 PF00970 Oxidoreductase FAD-binding domain NG829_01670 PF00111 2Fe-2S iron-sulfur cluster binding domain NG829_01680 PF01381 Helix-turn-helix NG829_01685 PF00561 alpha/beta hydrolase fold NG829_01690 PF00005 ABC transporter NG829_01710 PF03350 Uncharacterized protein family, UPF0114 NG829_01715 PF02798 Glutathione S-transferase, N-terminal domain NG829_01715 PF00043 Glutathione S-transferase, C-terminal domain NG829_01720 PF00326 Prolyl oligopeptidase family NG829_01720 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region NG829_01750 PF00490 Delta-aminolevulinic acid dehydratase NG829_01760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NG829_01760 PF03466 LysR substrate binding domain NG829_01770 PF00175 Oxidoreductase NAD-binding domain NG829_01770 PF00667 FAD binding domain NG829_01770 PF00258 Flavodoxin NG829_01775 PF07676 WD40-like Beta Propeller Repeat NG829_01775 PF04052 TolB amino-terminal domain NG829_01780 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NG829_01780 PF01488 Shikimate / quinate 5-dehydrogenase NG829_01780 PF08501 Shikimate dehydrogenase substrate binding domain NG829_01805 PF00529 HlyD membrane-fusion protein of T1SS NG829_01805 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NG829_01810 PF00664 ABC transporter transmembrane region NG829_01810 PF00005 ABC transporter NG829_01810 PF03412 Peptidase C39 family NG829_01835 PF00199 Catalase NG829_01835 PF06628 Catalase-related immune-responsive NG829_01860 PF07690 Major Facilitator Superfamily NG829_01865 PF05506 Domain of unknown function (DUF756) NG829_01865 PF04185 Phosphoesterase family NG829_01875 PF01594 AI-2E family transporter NG829_01895 PF10905 Protein of unknown function (DUF2695) NG829_01950 PF00920 Dehydratase family NG829_01965 PF03738 Glutathionylspermidine synthase preATP-grasp NG829_01990 PF07726 ATPase family associated with various cellular activities (AAA) NG829_01990 PF17863 AAA lid domain NG829_02020 PF00132 Bacterial transferase hexapeptide (six repeats) NG829_02025 PF05048 Periplasmic copper-binding protein (NosD) NG829_02030 PF04966 Carbohydrate-selective porin, OprB family NG829_02035 PF01487 Type I 3-dehydroquinase NG829_02040 PF07690 Major Facilitator Superfamily NG829_02045 PF01011 PQQ enzyme repeat NG829_02050 PF00529 HlyD membrane-fusion protein of T1SS NG829_02050 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NG829_02055 PF00873 AcrB/AcrD/AcrF family NG829_02060 PF02321 Outer membrane efflux protein NG829_02065 PF00069 Protein kinase domain NG829_02065 PF00400 WD domain, G-beta repeat NG829_02070 PF07859 alpha/beta hydrolase fold NG829_02075 PF01134 Glucose inhibited division protein A NG829_02075 PF13932 GidA associated domain NG829_02085 PF00291 Pyridoxal-phosphate dependent enzyme NG829_02095 PF01510 N-acetylmuramoyl-L-alanine amidase NG829_02105 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase NG829_02110 PF13649 Methyltransferase domain NG829_02120 PF12697 Alpha/beta hydrolase family NG829_02130 PF00155 Aminotransferase class I and II NG829_02135 PF06968 Biotin and Thiamin Synthesis associated domain NG829_02135 PF04055 Radical SAM superfamily NG829_02145 PF01040 UbiA prenyltransferase family NG829_02155 PF11808 Phosphate regulon sensor protein PhoR NG829_02155 PF00989 PAS fold NG829_02155 PF00512 His Kinase A (phospho-acceptor) domain NG829_02155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG829_02160 PF00486 Transcriptional regulatory protein, C terminal NG829_02160 PF00072 Response regulator receiver domain NG829_02165 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB NG829_02165 PF08479 POTRA domain, ShlB-type NG829_02170 PF05860 haemagglutination activity domain NG829_02190 PF13335 Magnesium chelatase, subunit ChlI C-terminal NG829_02190 PF01078 Magnesium chelatase, subunit ChlI NG829_02195 PF04380 Membrane fusogenic activity NG829_02200 PF00543 Nitrogen regulatory protein P-II NG829_02215 PF17284 Spermidine synthase tetramerisation domain NG829_02220 PF17810 Arginine decarboxylase helical bundle domain NG829_02220 PF17944 Arginine decarboxylase C-terminal helical extension NG829_02220 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NG829_02225 PF01757 Acyltransferase family NG829_02230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NG829_02230 PF03466 LysR substrate binding domain NG829_02265 PF00106 short chain dehydrogenase NG829_02275 PF03485 Arginyl tRNA synthetase N terminal domain NG829_02275 PF05746 DALR anticodon binding domain NG829_02275 PF00750 tRNA synthetases class I (R) NG829_02280 PF04002 RadC-like JAB domain NG829_02285 PF04127 DNA / pantothenate metabolism flavoprotein NG829_02285 PF02441 Flavoprotein NG829_02290 PF00692 dUTPase NG829_02295 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NG829_02295 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NG829_02295 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NG829_02295 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NG829_02305 PF00156 Phosphoribosyl transferase domain NG829_02310 PF03372 Endonuclease/Exonuclease/phosphatase family NG829_02315 PF07690 Major Facilitator Superfamily NG829_02325 PF03702 Anhydro-N-acetylmuramic acid kinase NG829_02330 PF04225 Opacity-associated protein A LysM-like domain NG829_02330 PF01551 Peptidase family M23 NG829_02335 PF00579 tRNA synthetases class I (W and Y) NG829_02365 PF00107 Zinc-binding dehydrogenase NG829_02365 PF08240 Alcohol dehydrogenase GroES-like domain NG829_02370 PF04389 Peptidase family M28 NG829_02380 PF01551 Peptidase family M23 NG829_02385 PF13180 PDZ domain NG829_02385 PF03572 Peptidase family S41 NG829_02390 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NG829_02390 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NG829_02405 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) NG829_02410 PF14850 DNA-binding domain of Proline dehydrogenase NG829_02410 PF18327 Proline utilization A proline dehydrogenase N-terminal domain NG829_02410 PF01619 Proline dehydrogenase NG829_02410 PF00171 Aldehyde dehydrogenase family NG829_02420 PF02790 Cytochrome C oxidase subunit II, transmembrane domain NG829_02420 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NG829_02425 PF00115 Cytochrome C and Quinol oxidase polypeptide I NG829_02430 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 NG829_02435 PF00510 Cytochrome c oxidase subunit III NG829_02460 PF01040 UbiA prenyltransferase family NG829_02465 PF00672 HAMP domain NG829_02465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG829_02465 PF02203 Tar ligand binding domain homologue NG829_02475 PF13593 SBF-like CPA transporter family (DUF4137) NG829_02485 PF08275 DNA primase catalytic core, N-terminal domain NG829_02485 PF01807 CHC2 zinc finger NG829_02485 PF10410 DnaB-helicase binding domain of primase NG829_02485 PF08278 DNA primase DnaG DnaB-binding NG829_02490 PF03631 Virulence factor BrkB NG829_02500 PF01165 Ribosomal protein S21 NG829_02505 PF00814 Glycoprotease family NG829_02510 PF02152 Dihydroneopterin aldolase NG829_02515 PF00924 Mechanosensitive ion channel NG829_02520 PF14403 Circularly permuted ATP-grasp type 2 NG829_02530 PF14310 Fibronectin type III-like domain NG829_02530 PF01915 Glycosyl hydrolase family 3 C-terminal domain NG829_02530 PF00933 Glycosyl hydrolase family 3 N terminal domain NG829_02535 PF05360 yiaA/B two helix domain NG829_02540 PF07995 Glucose / Sorbosone dehydrogenase NG829_02560 PF13520 Amino acid permease NG829_02575 PF00356 Bacterial regulatory proteins, lacI family NG829_02595 PF04820 Tryptophan halogenase NG829_02600 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NG829_02600 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NG829_02610 PF00933 Glycosyl hydrolase family 3 N terminal domain NG829_02610 PF01915 Glycosyl hydrolase family 3 C-terminal domain NG829_02610 PF14310 Fibronectin type III-like domain NG829_02615 PF00356 Bacterial regulatory proteins, lacI family NG829_02620 PF07488 Glycosyl hydrolase family 67 middle domain NG829_02620 PF03648 Glycosyl hydrolase family 67 N-terminus NG829_02620 PF07477 Glycosyl hydrolase family 67 C-terminus NG829_02630 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain NG829_02630 PF04616 Glycosyl hydrolases family 43 NG829_02635 PF01915 Glycosyl hydrolase family 3 C-terminal domain NG829_02635 PF07691 PA14 domain NG829_02635 PF14310 Fibronectin type III-like domain NG829_02635 PF00933 Glycosyl hydrolase family 3 N terminal domain NG829_02645 PF04616 Glycosyl hydrolases family 43 NG829_02650 PF13378 Enolase C-terminal domain-like NG829_02650 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NG829_02660 PF07715 TonB-dependent Receptor Plug Domain NG829_02660 PF00593 TonB dependent receptor NG829_02665 PF01510 N-acetylmuramoyl-L-alanine amidase NG829_02690 PF01471 Putative peptidoglycan binding domain NG829_02690 PF04717 Type VI secretion system, phage-baseplate injector NG829_02725 PF07063 Domain of unknown function (DUF1338) NG829_02730 PF02789 Cytosol aminopeptidase family, N-terminal domain NG829_02730 PF00883 Cytosol aminopeptidase family, catalytic domain NG829_02735 PF13419 Haloacid dehalogenase-like hydrolase NG829_02740 PF01594 AI-2E family transporter NG829_02765 PF13180 PDZ domain NG829_02765 PF00595 PDZ domain NG829_02770 PF00772 DnaB-like helicase N terminal domain NG829_02770 PF03796 DnaB-like helicase C terminal domain NG829_02770 PF14528 LAGLIDADG-like domain NG829_02815 PF00563 EAL domain NG829_02815 PF00990 Diguanylate cyclase, GGDEF domain NG829_02815 PF03707 Bacterial signalling protein N terminal repeat NG829_02820 PF00106 short chain dehydrogenase NG829_02855 PF03372 Endonuclease/Exonuclease/phosphatase family NG829_02860 PF00013 KH domain NG829_02860 PF01966 HD domain NG829_02860 PF12072 Domain of unknown function (DUF3552) NG829_02865 PF07308 Protein of unknown function (DUF1456) NG829_02870 PF00455 DeoR C terminal sensor domain NG829_02870 PF08220 DeoR-like helix-turn-helix domain NG829_02880 PF00230 Major intrinsic protein NG829_02885 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NG829_02885 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NG829_02895 PF13419 Haloacid dehalogenase-like hydrolase NG829_02905 PF00248 Aldo/keto reductase family NG829_02920 PF01557 Fumarylacetoacetate (FAA) hydrolase family NG829_02925 PF13378 Enolase C-terminal domain-like NG829_02925 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NG829_02930 PF05336 L-rhamnose mutarotase NG829_02935 PF07690 Major Facilitator Superfamily NG829_02940 PF09339 IclR helix-turn-helix domain NG829_02940 PF01614 Bacterial transcriptional regulator NG829_02955 PF10905 Protein of unknown function (DUF2695) NG829_02980 PF02678 Pirin NG829_02980 PF05726 Pirin C-terminal cupin domain NG829_03005 PF08240 Alcohol dehydrogenase GroES-like domain NG829_03005 PF00107 Zinc-binding dehydrogenase NG829_03010 PF00924 Mechanosensitive ion channel NG829_03010 PF12795 Mechanosensitive ion channel porin domain NG829_03010 PF12794 Mechanosensitive ion channel inner membrane domain 1 NG829_03015 PF03109 ABC1 family NG829_03030 PF02734 DAK2 domain NG829_03030 PF02733 Dak1 domain NG829_03035 PF05661 Protein of unknown function (DUF808) NG829_03040 PF00990 Diguanylate cyclase, GGDEF domain NG829_03050 PF02308 MgtC family NG829_03055 PF00294 pfkB family carbohydrate kinase NG829_03075 PF00270 DEAD/DEAH box helicase NG829_03075 PF00271 Helicase conserved C-terminal domain NG829_03080 PF02868 Thermolysin metallopeptidase, alpha-helical domain NG829_03080 PF04151 Bacterial pre-peptidase C-terminal domain NG829_03080 PF03413 Peptidase propeptide and YPEB domain NG829_03080 PF07504 Fungalysin/Thermolysin Propeptide Motif NG829_03080 PF01447 Thermolysin metallopeptidase, catalytic domain NG829_03085 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NG829_03085 PF00364 Biotin-requiring enzyme NG829_03085 PF02817 e3 binding domain NG829_03095 PF02779 Transketolase, pyrimidine binding domain NG829_03095 PF02780 Transketolase, C-terminal domain NG829_03100 PF00676 Dehydrogenase E1 component NG829_03115 PF03301 Tryptophan 2,3-dioxygenase NG829_03120 PF00854 POT family NG829_03135 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NG829_03140 PF04480 Protein of unknown function (DUF559) NG829_03145 PF04209 homogentisate 1,2-dioxygenase NG829_03160 PF00873 AcrB/AcrD/AcrF family NG829_03165 PF00873 AcrB/AcrD/AcrF family NG829_03170 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NG829_03175 PF01546 Peptidase family M20/M25/M40 NG829_03175 PF07687 Peptidase dimerisation domain NG829_03180 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term NG829_03180 PF14489 QueF-like protein NG829_03185 PF04972 BON domain NG829_03185 PF01476 LysM domain NG829_03195 PF01979 Amidohydrolase family NG829_03200 PF00455 DeoR C terminal sensor domain NG829_03200 PF08220 DeoR-like helix-turn-helix domain NG829_03205 PF08013 Tagatose 6 phosphate kinase NG829_03210 PF00480 ROK family NG829_03215 PF01380 SIS domain NG829_03220 PF17137 Domain of unknown function (DUF5110) NG829_03220 PF16338 Domain of unknown function (DUF4968) NG829_03220 PF01055 Glycosyl hydrolases family 31 NG829_03225 PF07715 TonB-dependent Receptor Plug Domain NG829_03225 PF00593 TonB dependent receptor NG829_03230 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NG829_03240 PF03971 Monomeric isocitrate dehydrogenase NG829_03245 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) NG829_03265 PF12161 HsdM N-terminal domain NG829_03265 PF02384 N-6 DNA Methylase NG829_03270 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NG829_03270 PF07497 Rho termination factor, RNA-binding domain NG829_03270 PF07498 Rho termination factor, N-terminal domain NG829_03275 PF00085 Thioredoxin NG829_03280 PF00270 DEAD/DEAH box helicase NG829_03280 PF00271 Helicase conserved C-terminal domain NG829_03280 PF12300 ATP-dependent RNA helicase RhlB NG829_03285 PF00005 ABC transporter NG829_03290 PF18075 FtsX extracellular domain NG829_03295 PF00072 Response regulator receiver domain NG829_03295 PF01339 CheB methylesterase NG829_03300 PF03167 Uracil DNA glycosylase superfamily NG829_03305 PF04542 Sigma-70 region 2 NG829_03305 PF04545 Sigma-70, region 4 NG829_03310 PF03458 UPF0126 domain NG829_03315 PF07992 Pyridine nucleotide-disulphide oxidoreductase NG829_03325 PF00271 Helicase conserved C-terminal domain NG829_03325 PF00270 DEAD/DEAH box helicase NG829_03325 PF18074 Primosomal protein N C-terminal domain NG829_03325 PF18319 PriA DNA helicase Cys-rich region (CRR) domain NG829_03325 PF17764 3′ DNA-binding domain (3′BD) NG829_03335 PF01554 MatE NG829_03340 PF01343 Peptidase family S49 NG829_03365 PF01300 Telomere recombination NG829_03370 PF13368 Topoisomerase C-terminal repeat NG829_03370 PF01751 Toprim domain NG829_03370 PF01131 DNA topoisomerase NG829_03375 PF06271 RDD family NG829_03380 PF07963 Prokaryotic N-terminal methylation motif NG829_03380 PF00114 Pilin (bacterial filament) NG829_03385 PF04361 Protein of unknown function (DUF494) NG829_03390 PF17782 DprA winged helix domain NG829_03390 PF02481 DNA recombination-mediator protein A NG829_03395 PF01476 LysM domain NG829_03400 PF01327 Polypeptide deformylase NG829_03405 PF00551 Formyl transferase NG829_03405 PF02911 Formyl transferase, C-terminal domain NG829_03410 PF01189 16S rRNA methyltransferase RsmB/F NG829_03410 PF01029 NusB family NG829_03415 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase NG829_03430 PF00535 Glycosyl transferase family 2 NG829_03450 PF00925 GTP cyclohydrolase II NG829_03465 PF02580 D-Tyr-tRNA(Tyr) deacylase NG829_03470 PF04539 Sigma-70 region 3 NG829_03470 PF04545 Sigma-70, region 4 NG829_03470 PF04542 Sigma-70 region 2 NG829_03470 PF04546 Sigma-70, non-essential region NG829_03470 PF03979 Sigma-70 factor, region 1.1 NG829_03470 PF00140 Sigma-70 factor, region 1.2 NG829_03480 PF07690 Major Facilitator Superfamily NG829_03485 PF00356 Bacterial regulatory proteins, lacI family NG829_03485 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NG829_03490 PF17678 Glycosyl hydrolase family 92 N-terminal domain NG829_03490 PF07971 Glycosyl hydrolase family 92 NG829_03495 PF11896 Domain of unknown function (DUF3416) NG829_03495 PF00128 Alpha amylase, catalytic domain NG829_03500 PF00128 Alpha amylase, catalytic domain NG829_03500 PF16657 Maltogenic Amylase, C-terminal domain NG829_03505 PF00128 Alpha amylase, catalytic domain NG829_03505 PF02806 Alpha amylase, C-terminal all-beta domain NG829_03505 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NG829_03605 PF02899 Phage integrase, N-terminal SAM-like domain NG829_03605 PF00589 Phage integrase family NG829_03645 PF04545 Sigma-70, region 4 NG829_03645 PF04542 Sigma-70 region 2 NG829_03670 PF00356 Bacterial regulatory proteins, lacI family NG829_03680 PF07995 Glucose / Sorbosone dehydrogenase NG829_03690 PF00873 AcrB/AcrD/AcrF family NG829_03695 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NG829_03695 PF00529 HlyD membrane-fusion protein of T1SS NG829_03700 PF00072 Response regulator receiver domain NG829_03700 PF00486 Transcriptional regulatory protein, C terminal NG829_03705 PF00512 His Kinase A (phospho-acceptor) domain NG829_03705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG829_03705 PF00672 HAMP domain NG829_03715 PF01292 Prokaryotic cytochrome b561 NG829_03720 PF00440 Bacterial regulatory proteins, tetR family NG829_03735 PF12706 Beta-lactamase superfamily domain NG829_03750 PF07690 Major Facilitator Superfamily NG829_03770 PF02203 Tar ligand binding domain homologue NG829_03770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG829_03770 PF00672 HAMP domain NG829_03780 PF05067 Manganese containing catalase NG829_03785 PF05974 Domain of unknown function (DUF892) NG829_03790 PF05974 Domain of unknown function (DUF892) NG829_03800 PF00440 Bacterial regulatory proteins, tetR family NG829_03805 PF00970 Oxidoreductase FAD-binding domain NG829_03805 PF00111 2Fe-2S iron-sulfur cluster binding domain NG829_03805 PF00175 Oxidoreductase NAD-binding domain NG829_03810 PF00487 Fatty acid desaturase NG829_03825 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NG829_03825 PF00205 Thiamine pyrophosphate enzyme, central domain NG829_03825 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NG829_03830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG829_03830 PF00512 His Kinase A (phospho-acceptor) domain NG829_03835 PF02954 Bacterial regulatory protein, Fis family NG829_03835 PF00072 Response regulator receiver domain NG829_03835 PF00158 Sigma-54 interaction domain NG829_03850 PF07690 Major Facilitator Superfamily NG829_03860 PF14824 Sirohaem biosynthesis protein central NG829_03860 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NG829_03860 PF10414 Sirohaem synthase dimerisation region NG829_03870 PF00128 Alpha amylase, catalytic domain NG829_03870 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NG829_03880 PF00128 Alpha amylase, catalytic domain NG829_03885 PF02446 4-alpha-glucanotransferase NG829_03890 PF00128 Alpha amylase, catalytic domain NG829_03890 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NG829_03890 PF11941 Domain of unknown function (DUF3459) NG829_03895 PF00128 Alpha amylase, catalytic domain NG829_03895 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NG829_03895 PF02806 Alpha amylase, C-terminal all-beta domain NG829_03900 PF08323 Starch synthase catalytic domain NG829_03900 PF00534 Glycosyl transferases group 1 NG829_03910 PF02954 Bacterial regulatory protein, Fis family NG829_03910 PF00072 Response regulator receiver domain NG829_03910 PF00158 Sigma-54 interaction domain NG829_03915 PF00072 Response regulator receiver domain NG829_03915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG829_03915 PF13188 PAS domain NG829_03915 PF08448 PAS fold NG829_03915 PF00512 His Kinase A (phospho-acceptor) domain NG829_03920 PF00857 Isochorismatase family NG829_03925 PF13632 Glycosyl transferase family group 2 NG829_03935 PF00072 Response regulator receiver domain NG829_03935 PF04397 LytTr DNA-binding domain NG829_03940 PF03900 Porphobilinogen deaminase, C-terminal domain NG829_03940 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain NG829_03955 PF01638 HxlR-like helix-turn-helix NG829_03970 PF00326 Prolyl oligopeptidase family NG829_03970 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NG829_03980 PF00155 Aminotransferase class I and II NG829_03985 PF00326 Prolyl oligopeptidase family NG829_03985 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NG829_03990 PF04304 Protein of unknown function (DUF454) NG829_04000 PF01678 Diaminopimelate epimerase NG829_04010 PF00589 Phage integrase family NG829_04010 PF02899 Phage integrase, N-terminal SAM-like domain NG829_04020 PF00227 Proteasome subunit NG829_04025 PF10431 C-terminal, D2-small domain, of ClpB protein NG829_04025 PF00004 ATPase family associated with various cellular activities (AAA) NG829_04025 PF07724 AAA domain (Cdc48 subfamily) NG829_04045 PF01209 ubiE/COQ5 methyltransferase family NG829_04055 PF11838 ERAP1-like C-terminal domain NG829_04055 PF01433 Peptidase family M1 domain NG829_04065 PF00561 alpha/beta hydrolase fold NG829_04065 PF00364 Biotin-requiring enzyme NG829_04080 PF13360 PQQ-like domain NG829_04085 PF00497 Bacterial extracellular solute-binding proteins, family 3 NG829_04090 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NG829_04090 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP NG829_04100 PF08240 Alcohol dehydrogenase GroES-like domain NG829_04100 PF00107 Zinc-binding dehydrogenase NG829_04110 PF01590 GAF domain NG829_04110 PF02954 Bacterial regulatory protein, Fis family NG829_04110 PF00158 Sigma-54 interaction domain NG829_04125 PF00294 pfkB family carbohydrate kinase NG829_04135 PF04085 rod shape-determining protein MreC NG829_04145 PF03717 Penicillin-binding Protein dimerisation domain NG829_04145 PF00905 Penicillin binding protein transpeptidase domain NG829_04150 PF01098 Cell cycle protein NG829_04160 PF00295 Glycosyl hydrolases family 28 NG829_04165 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NG829_04165 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NG829_04170 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch NG829_04175 PF02233 NAD(P) transhydrogenase beta subunit NG829_04180 PF00171 Aldehyde dehydrogenase family NG829_04185 PF13406 Transglycosylase SLT domain NG829_04190 PF05036 Sporulation related domain NG829_04190 PF03330 Lytic transglycolase NG829_04195 PF07943 Penicillin-binding protein 5, C-terminal domain NG829_04195 PF00768 D-alanyl-D-alanine carboxypeptidase NG829_04205 PF04359 Protein of unknown function (DUF493) NG829_04210 PF03099 Biotin/lipoate A/B protein ligase family NG829_04215 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family NG829_04215 PF04055 Radical SAM superfamily NG829_04220 PF03572 Peptidase family S41 NG829_04220 PF11818 C-terminal domain of tail specific protease (DUF3340) NG829_04220 PF00595 PDZ domain NG829_04220 PF17804 Tail specific protease N-terminal domain NG829_04230 PF03466 LysR substrate binding domain NG829_04230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NG829_04240 PF07745 Glycosyl hydrolase family 53 NG829_04245 PF01467 Cytidylyltransferase-like NG829_04245 PF00293 NUDIX domain NG829_04260 PF01555 DNA methylase NG829_04275 PF08338 Domain of unknown function (DUF1731) NG829_04275 PF01370 NAD dependent epimerase/dehydratase family NG829_04285 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NG829_04285 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain NG829_04290 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NG829_04290 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NG829_04295 PF04972 BON domain NG829_04305 PF00512 His Kinase A (phospho-acceptor) domain NG829_04305 PF07689 KaiB domain NG829_04305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG829_04310 PF00072 Response regulator receiver domain NG829_04315 PF00512 His Kinase A (phospho-acceptor) domain NG829_04315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG829_04325 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NG829_04345 PF03330 Lytic transglycolase NG829_04355 PF07702 UTRA domain NG829_04355 PF00392 Bacterial regulatory proteins, gntR family NG829_04360 PF07690 Major Facilitator Superfamily NG829_04365 PF00356 Bacterial regulatory proteins, lacI family NG829_04370 PF01380 SIS domain NG829_04375 PF01979 Amidohydrolase family NG829_04385 PF12627 Probable RNA and SrmB- binding site of polymerase A NG829_04385 PF01743 Poly A polymerase head domain NG829_04385 PF01966 HD domain NG829_04390 PF01464 Transglycosylase SLT domain NG829_04390 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain NG829_04395 PF07715 TonB-dependent Receptor Plug Domain NG829_04395 PF00593 TonB dependent receptor NG829_04410 PF01323 DSBA-like thioredoxin domain NG829_04415 PF00034 Cytochrome c NG829_04420 PF01926 50S ribosome-binding GTPase NG829_04430 PF12833 Helix-turn-helix domain NG829_04440 PF04107 Glutamate-cysteine ligase family 2(GCS2) NG829_04460 PF01906 Putative heavy-metal-binding NG829_04465 PF00512 His Kinase A (phospho-acceptor) domain NG829_04465 PF00672 HAMP domain NG829_04465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG829_04470 PF00486 Transcriptional regulatory protein, C terminal NG829_04470 PF00072 Response regulator receiver domain NG829_04475 PF02583 Metal-sensitive transcriptional repressor NG829_04480 PF08240 Alcohol dehydrogenase GroES-like domain NG829_04480 PF00107 Zinc-binding dehydrogenase NG829_04485 PF04828 Glutathione-dependent formaldehyde-activating enzyme NG829_04490 PF00756 Putative esterase NG829_04495 PF00392 Bacterial regulatory proteins, gntR family NG829_04495 PF00155 Aminotransferase class I and II NG829_04500 PF02567 Phenazine biosynthesis-like protein NG829_04505 PF00892 EamA-like transporter family NG829_04515 PF02645 Uncharacterised protein, DegV family COG1307 NG829_04520 PF01323 DSBA-like thioredoxin domain NG829_04545 PF01979 Amidohydrolase family NG829_04545 PF00449 Urease alpha-subunit, N-terminal domain NG829_04550 PF01979 Amidohydrolase family NG829_04560 PF00462 Glutaredoxin NG829_04565 PF01522 Polysaccharide deacetylase NG829_04580 PF00155 Aminotransferase class I and II NG829_04585 PF03193 RsgA GTPase NG829_04605 PF00128 Alpha amylase, catalytic domain NG829_04620 PF00356 Bacterial regulatory proteins, lacI family NG829_04625 PF00106 short chain dehydrogenase NG829_04630 PF03600 Citrate transporter NG829_04645 PF00486 Transcriptional regulatory protein, C terminal NG829_04645 PF00072 Response regulator receiver domain NG829_04650 PF08521 Two-component sensor kinase N-terminal NG829_04650 PF00512 His Kinase A (phospho-acceptor) domain NG829_04650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG829_04660 PF07494 Two component regulator propeller NG829_04660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG829_04660 PF00512 His Kinase A (phospho-acceptor) domain NG829_04660 PF12833 Helix-turn-helix domain NG829_04660 PF07494 Two component regulator propeller NG829_04660 PF00072 Response regulator receiver domain NG829_04660 PF07495 Y_Y_Y domain NG829_04660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG829_04660 PF00512 His Kinase A (phospho-acceptor) domain NG829_04660 PF12833 Helix-turn-helix domain NG829_04660 PF00072 Response regulator receiver domain NG829_04660 PF07495 Y_Y_Y domain NG829_04665 PF00196 Bacterial regulatory proteins, luxR family NG829_04665 PF00072 Response regulator receiver domain NG829_04675 PF01627 Hpt domain NG829_04675 PF00512 His Kinase A (phospho-acceptor) domain NG829_04675 PF00072 Response regulator receiver domain NG829_04675 PF00672 HAMP domain NG829_04675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG829_04685 PF00375 Sodium:dicarboxylate symporter family NG829_04690 PF00390 Malic enzyme, N-terminal domain NG829_04690 PF03949 Malic enzyme, NAD binding domain NG829_04690 PF01515 Phosphate acetyl/butaryl transferase NG829_04715 PF03279 Bacterial lipid A biosynthesis acyltransferase NG829_04720 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) NG829_04725 PF02321 Outer membrane efflux protein NG829_04745 PF00501 AMP-binding enzyme NG829_04755 PF00106 short chain dehydrogenase NG829_04765 PF00486 Transcriptional regulatory protein, C terminal NG829_04765 PF00072 Response regulator receiver domain NG829_04770 PF00512 His Kinase A (phospho-acceptor) domain NG829_04770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG829_04775 PF00990 Diguanylate cyclase, GGDEF domain NG829_04780 PF00180 Isocitrate/isopropylmalate dehydrogenase NG829_04785 PF00694 Aconitase C-terminal domain NG829_04795 PF00330 Aconitase family (aconitate hydratase) NG829_04800 PF00682 HMGL-like NG829_04800 PF08502 LeuA allosteric (dimerisation) domain NG829_04805 PF00291 Pyridoxal-phosphate dependent enzyme NG829_04815 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NG829_04815 PF00205 Thiamine pyrophosphate enzyme, central domain NG829_04815 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NG829_04820 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain NG829_04820 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain NG829_04830 PF02028 BCCT, betaine/carnitine/choline family transporter NG829_04835 PF00672 HAMP domain NG829_04835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG829_04835 PF02203 Tar ligand binding domain homologue NG829_04840 PF13667 ThiC-associated domain NG829_04840 PF01964 Radical SAM ThiC family NG829_04850 PF00326 Prolyl oligopeptidase family NG829_04850 PF07676 WD40-like Beta Propeller Repeat NG829_04860 PF00593 TonB dependent receptor NG829_04860 PF07715 TonB-dependent Receptor Plug Domain NG829_04870 PF00719 Inorganic pyrophosphatase NG829_04880 PF03030 Inorganic H+ pyrophosphatase NG829_04895 PF00365 Phosphofructokinase NG829_04905 PF01225 Mur ligase family, catalytic domain NG829_04905 PF02875 Mur ligase family, glutamate ligase domain NG829_04905 PF08245 Mur ligase middle domain NG829_04920 PF09335 SNARE associated Golgi protein NG829_04940 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NG829_04945 PF00027 Cyclic nucleotide-binding domain NG829_04945 PF00520 Ion transport protein NG829_04950 PF00202 Aminotransferase class-III NG829_04960 PF00127 Copper binding proteins, plastocyanin/azurin family NG829_04965 PF00202 Aminotransferase class-III NG829_04970 PF02581 Thiamine monophosphate synthase NG829_04975 PF00301 Rubredoxin NG829_04980 PF13369 Transglutaminase-like superfamily NG829_04990 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) NG829_05000 PF01812 5-formyltetrahydrofolate cyclo-ligase family NG829_05015 PF05164 Cell division protein ZapA NG829_05025 PF00563 EAL domain NG829_05025 PF00990 Diguanylate cyclase, GGDEF domain NG829_05025 PF03707 Bacterial signalling protein N terminal repeat NG829_05030 PF03695 Uncharacterised protein family (UPF0149) NG829_05035 PF05195 Aminopeptidase P, N-terminal domain NG829_05035 PF00557 Metallopeptidase family M24 NG829_05045 PF00557 Metallopeptidase family M24 NG829_05060 PF06969 HemN C-terminal domain NG829_05060 PF04055 Radical SAM superfamily NG829_05065 PF01725 Ham1 family NG829_05070 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NG829_05075 PF01138 3' exoribonuclease family, domain 1 NG829_05075 PF03725 3' exoribonuclease family, domain 2 NG829_05080 PF08340 Domain of unknown function (DUF1732) NG829_05080 PF03755 YicC-like family, N-terminal region NG829_05085 PF00625 Guanylate kinase NG829_05090 PF01192 RNA polymerase Rpb6 NG829_05095 PF04607 Region found in RelA / SpoT proteins NG829_05095 PF02824 TGS domain NG829_05095 PF13291 ACT domain NG829_05100 PF01042 Endoribonuclease L-PSP NG829_05105 PF00270 DEAD/DEAH box helicase NG829_05105 PF00271 Helicase conserved C-terminal domain NG829_05105 PF17191 RecG wedge domain NG829_05110 PF01156 Inosine-uridine preferring nucleoside hydrolase NG829_05115 PF01197 Ribosomal protein L31 NG829_05120 PF00285 Citrate synthase, C-terminal domain NG829_05130 PF00912 Transglycosylase NG829_05130 PF00905 Penicillin binding protein transpeptidase domain NG829_05130 PF17092 Penicillin-binding protein OB-like domain NG829_05135 PF11104 Type IV pilus assembly protein PilM; NG829_05145 PF04350 Pilus assembly protein, PilO NG829_05150 PF04351 Pilus assembly protein, PilP NG829_05155 PF11741 AMIN domain NG829_05155 PF00263 Bacterial type II and III secretion system protein NG829_05155 PF03958 Bacterial type II/III secretion system short domain NG829_05155 PF07660 Secretin and TonB N terminus short domain NG829_05160 PF07726 ATPase family associated with various cellular activities (AAA) NG829_05160 PF17863 AAA lid domain NG829_05165 PF01882 Protein of unknown function DUF58 NG829_05175 PF13519 von Willebrand factor type A domain NG829_05190 PF00375 Sodium:dicarboxylate symporter family NG829_05195 PF02780 Transketolase, C-terminal domain NG829_05195 PF00456 Transketolase, thiamine diphosphate binding domain NG829_05195 PF02779 Transketolase, pyrimidine binding domain NG829_05240 PF03965 Penicillinase repressor NG829_05260 PF00005 ABC transporter NG829_05260 PF03459 TOBE domain NG829_05265 PF00528 Binding-protein-dependent transport system inner membrane component NG829_05275 PF00753 Metallo-beta-lactamase superfamily NG829_05275 PF04273 Putative phosphatase (DUF442) NG829_05280 PF01022 Bacterial regulatory protein, arsR family NG829_05295 PF00873 AcrB/AcrD/AcrF family NG829_05305 PF00085 Thioredoxin NG829_05315 PF03922 OmpW family NG829_05320 PF03922 OmpW family NG829_05325 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NG829_05325 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NG829_05355 PF00162 Phosphoglycerate kinase NG829_05360 PF13419 Haloacid dehalogenase-like hydrolase NG829_05365 PF02887 Pyruvate kinase, alpha/beta domain NG829_05365 PF00224 Pyruvate kinase, barrel domain NG829_05375 PF00274 Fructose-bisphosphate aldolase class-I NG829_05380 PF00486 Transcriptional regulatory protein, C terminal NG829_05380 PF00072 Response regulator receiver domain NG829_05385 PF00672 HAMP domain NG829_05385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG829_05385 PF00512 His Kinase A (phospho-acceptor) domain NG829_05395 PF08479 POTRA domain, ShlB-type NG829_05395 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB NG829_05400 PF01661 Macro domain NG829_05415 PF01156 Inosine-uridine preferring nucleoside hydrolase NG829_05425 PF00291 Pyridoxal-phosphate dependent enzyme NG829_05430 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NG829_05430 PF14824 Sirohaem biosynthesis protein central NG829_05430 PF10414 Sirohaem synthase dimerisation region NG829_05435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NG829_05435 PF03466 LysR substrate binding domain NG829_05445 PF00672 HAMP domain NG829_05445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG829_05445 PF00512 His Kinase A (phospho-acceptor) domain NG829_05445 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB NG829_05445 PF08448 PAS fold NG829_05450 PF03960 ArsC family NG829_05470 PF01507 Phosphoadenosine phosphosulfate reductase family NG829_05475 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NG829_05475 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NG829_05480 PF00667 FAD binding domain NG829_05480 PF00258 Flavodoxin NG829_05480 PF00175 Oxidoreductase NAD-binding domain NG829_05485 PF01507 Phosphoadenosine phosphosulfate reductase family NG829_05490 PF00009 Elongation factor Tu GTP binding domain NG829_05495 PF11838 ERAP1-like C-terminal domain NG829_05495 PF01433 Peptidase family M1 domain NG829_05505 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NG829_05510 PF00873 AcrB/AcrD/AcrF family NG829_05515 PF13439 Glycosyltransferase Family 4 NG829_05515 PF00534 Glycosyl transferases group 1 NG829_05525 PF13302 Acetyltransferase (GNAT) domain NG829_05535 PF00588 SpoU rRNA Methylase family NG829_05535 PF08032 RNA 2'-O ribose methyltransferase substrate binding NG829_05550 PF00356 Bacterial regulatory proteins, lacI family NG829_05555 PF02225 PA domain NG829_05555 PF04389 Peptidase family M28 NG829_05560 PF01741 Large-conductance mechanosensitive channel, MscL NG829_05565 PF01557 Fumarylacetoacetate (FAA) hydrolase family NG829_05580 PF03600 Citrate transporter NG829_05580 PF02080 TrkA-C domain NG829_05585 PF02390 Putative methyltransferase NG829_05590 PF05690 Thiazole biosynthesis protein ThiG NG829_05620 PF05506 Domain of unknown function (DUF756) NG829_05620 PF04185 Phosphoesterase family NG829_05625 PF07715 TonB-dependent Receptor Plug Domain NG829_05625 PF07660 Secretin and TonB N terminus short domain NG829_05625 PF00593 TonB dependent receptor NG829_05630 PF08443 RimK-like ATP-grasp domain NG829_05630 PF18030 RimK PreATP-grasp domain NG829_05640 PF00072 Response regulator receiver domain NG829_05640 PF00486 Transcriptional regulatory protein, C terminal NG829_05645 PF00512 His Kinase A (phospho-acceptor) domain NG829_05645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG829_05645 PF11808 Phosphate regulon sensor protein PhoR NG829_05645 PF00989 PAS fold NG829_05650 PF01121 Dephospho-CoA kinase NG829_05655 PF01478 Type IV leader peptidase family NG829_05655 PF06750 Bacterial Peptidase A24 N-terminal domain NG829_05660 PF00482 Type II secretion system (T2SS), protein F NG829_05675 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NG829_05675 PF00437 Type II/IV secretion system protein NG829_05680 PF02954 Bacterial regulatory protein, Fis family NG829_05680 PF00072 Response regulator receiver domain NG829_05680 PF00158 Sigma-54 interaction domain NG829_05685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG829_05685 PF00512 His Kinase A (phospho-acceptor) domain NG829_05690 PF00549 CoA-ligase NG829_05690 PF08442 ATP-grasp domain NG829_05695 PF00549 CoA-ligase NG829_05695 PF02629 CoA binding domain NG829_05700 PF01011 PQQ enzyme repeat NG829_05705 PF02540 NAD synthase NG829_05705 PF00795 Carbon-nitrogen hydrolase NG829_05715 PF03781 Sulfatase-modifying factor enzyme 1 NG829_05715 PF12867 DinB superfamily NG829_05725 PF00528 Binding-protein-dependent transport system inner membrane component NG829_05730 PF00005 ABC transporter NG829_05740 PF13525 Outer membrane lipoprotein NG829_05745 PF00849 RNA pseudouridylate synthase NG829_05750 PF02578 Multi-copper polyphenol oxidoreductase laccase NG829_05770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG829_05770 PF02203 Tar ligand binding domain homologue NG829_05770 PF00672 HAMP domain NG829_05775 PF01011 PQQ enzyme repeat NG829_05780 PF00982 Glycosyltransferase family 20 NG829_05785 PF00723 Glycosyl hydrolases family 15 NG829_05790 PF02358 Trehalose-phosphatase NG829_05795 PF07715 TonB-dependent Receptor Plug Domain NG829_05795 PF00593 TonB dependent receptor NG829_05830 PF00004 ATPase family associated with various cellular activities (AAA) NG829_05830 PF07724 AAA domain (Cdc48 subfamily) NG829_05830 PF10431 C-terminal, D2-small domain, of ClpB protein NG829_05830 PF02861 Clp amino terminal domain, pathogenicity island component NG829_05830 PF17871 AAA lid domain NG829_05840 PF01053 Cys/Met metabolism PLP-dependent enzyme NG829_05850 PF07690 Major Facilitator Superfamily NG829_05860 PF07769 psiF repeat NG829_05865 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NG829_05865 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NG829_05870 PF06276 Ferric iron reductase FhuF-like transporter NG829_05870 PF04183 IucA / IucC family NG829_05875 PF07690 Major Facilitator Superfamily NG829_05890 PF07715 TonB-dependent Receptor Plug Domain NG829_05890 PF07660 Secretin and TonB N terminus short domain NG829_05890 PF00593 TonB dependent receptor NG829_05895 PF03328 HpcH/HpaI aldolase/citrate lyase family NG829_05900 PF02254 TrkA-N domain NG829_05900 PF00999 Sodium/hydrogen exchanger family NG829_05920 PF00593 TonB dependent receptor NG829_05920 PF07715 TonB-dependent Receptor Plug Domain NG829_05935 PF12848 ABC transporter NG829_05935 PF00005 ABC transporter NG829_05945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NG829_05945 PF03466 LysR substrate binding domain NG829_05955 PF13472 GDSL-like Lipase/Acylhydrolase family NG829_05955 PF07859 alpha/beta hydrolase fold NG829_05960 PF05506 Domain of unknown function (DUF756) NG829_05960 PF04185 Phosphoesterase family NG829_05980 PF02938 GAD domain NG829_05980 PF01336 OB-fold nucleic acid binding domain NG829_05980 PF00152 tRNA synthetases class II (D, K and N) NG829_06010 PF01709 Transcriptional regulator NG829_06015 PF02075 Crossover junction endodeoxyribonuclease RuvC NG829_06020 PF01330 RuvA N terminal domain NG829_06020 PF07499 RuvA, C-terminal domain NG829_06025 PF02705 K+ potassium transporter NG829_06030 PF05491 RuvB C-terminal winged helix domain NG829_06030 PF17864 RuvB AAA lid domain NG829_06030 PF05496 Holliday junction DNA helicase RuvB P-loop domain NG829_06035 PF03061 Thioesterase superfamily NG829_06040 PF01618 MotA/TolQ/ExbB proton channel family NG829_06045 PF02472 Biopolymer transport protein ExbD/TolR NG829_06055 PF04052 TolB amino-terminal domain NG829_06055 PF07676 WD40-like Beta Propeller Repeat NG829_06070 PF04055 Radical SAM superfamily NG829_06075 PF06508 Queuosine biosynthesis protein QueC NG829_06090 PF01810 LysE type translocator NG829_06110 PF00271 Helicase conserved C-terminal domain NG829_06110 PF16124 RecQ zinc-binding NG829_06110 PF00570 HRDC domain NG829_06110 PF00270 DEAD/DEAH box helicase NG829_06110 PF09382 RQC domain NG829_06115 PF00210 Ferritin-like domain NG829_06120 PF00271 Helicase conserved C-terminal domain NG829_06120 PF00270 DEAD/DEAH box helicase NG829_06120 PF11898 Domain of unknown function (DUF3418) NG829_06120 PF04408 Helicase associated domain (HA2) NG829_06120 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold NG829_06125 PF00654 Voltage gated chloride channel NG829_06135 PF04055 Radical SAM superfamily NG829_06135 PF13186 Iron-sulfur cluster-binding domain NG829_06140 PF05402 Coenzyme PQQ synthesis protein D (PqqD) NG829_06145 PF03070 TENA/THI-4/PQQC family NG829_06150 PF12706 Beta-lactamase superfamily domain NG829_06160 PF13291 ACT domain NG829_06160 PF02824 TGS domain NG829_06160 PF04607 Region found in RelA / SpoT proteins NG829_06170 PF00535 Glycosyl transferase family 2 NG829_06175 PF00905 Penicillin binding protein transpeptidase domain NG829_06175 PF00912 Transglycosylase NG829_06175 PF14814 Bifunctional transglycosylase second domain NG829_06185 PF04851 Type III restriction enzyme, res subunit NG829_06185 PF13307 Helicase C-terminal domain NG829_06190 PF00814 Glycoprotease family NG829_06195 PF00175 Oxidoreductase NAD-binding domain NG829_06195 PF00970 Oxidoreductase FAD-binding domain NG829_06195 PF00042 Globin NG829_06200 PF02798 Glutathione S-transferase, N-terminal domain NG829_06205 PF03466 LysR substrate binding domain NG829_06205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NG829_06210 PF00593 TonB dependent receptor NG829_06220 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain NG829_06220 PF02951 Prokaryotic glutathione synthetase, N-terminal domain NG829_06225 PF00072 Response regulator receiver domain NG829_06230 PF00072 Response regulator receiver domain NG829_06235 PF01584 CheW-like domain NG829_06240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG829_06240 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term NG829_06245 PF00072 Response regulator receiver domain NG829_06245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG829_06245 PF01584 CheW-like domain NG829_06245 PF02895 Signal transducing histidine kinase, homodimeric domain NG829_06245 PF01627 Hpt domain NG829_06250 PF01339 CheB methylesterase NG829_06250 PF00072 Response regulator receiver domain NG829_06280 PF01112 Asparaginase NG829_06285 PF03932 CutC family NG829_06355 PF01638 HxlR-like helix-turn-helix NG829_06360 PF00107 Zinc-binding dehydrogenase NG829_06360 PF08240 Alcohol dehydrogenase GroES-like domain NG829_06395 PF01420 Type I restriction modification DNA specificity domain NG829_06400 PF02384 N-6 DNA Methylase NG829_06405 PF02661 Fic/DOC family NG829_06410 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) NG829_06410 PF04851 Type III restriction enzyme, res subunit NG829_06410 PF08463 EcoEI R protein C-terminal NG829_06410 PF00271 Helicase conserved C-terminal domain NG829_06420 PF01301 Glycosyl hydrolases family 35 NG829_06425 PF07971 Glycosyl hydrolase family 92 NG829_06425 PF17678 Glycosyl hydrolase family 92 N-terminal domain NG829_06435 PF02056 Family 4 glycosyl hydrolase NG829_06435 PF11975 Family 4 glycosyl hydrolase C-terminal domain NG829_06445 PF13520 Amino acid permease NG829_06450 PF01301 Glycosyl hydrolases family 35 NG829_06465 PF01915 Glycosyl hydrolase family 3 C-terminal domain NG829_06465 PF00933 Glycosyl hydrolase family 3 N terminal domain NG829_06465 PF07691 PA14 domain NG829_06465 PF14310 Fibronectin type III-like domain NG829_06475 PF07691 PA14 domain NG829_06475 PF02838 Glycosyl hydrolase family 20, domain 2 NG829_06475 PF00728 Glycosyl hydrolase family 20, catalytic domain NG829_06480 PF01476 LysM domain NG829_06480 PF00704 Glycosyl hydrolases family 18 NG829_06495 PF02685 Glucokinase NG829_06500 PF04452 RNA methyltransferase NG829_06505 PF00202 Aminotransferase class-III NG829_06510 PF00293 NUDIX domain NG829_06515 PF00459 Inositol monophosphatase family NG829_06520 PF03819 MazG nucleotide pyrophosphohydrolase domain NG829_06525 PF02694 Uncharacterised BCR, YnfA/UPF0060 family NG829_06535 PF01145 SPFH domain / Band 7 family NG829_06535 PF16200 C-terminal region of band_7 NG829_06545 PF01571 Aminomethyltransferase folate-binding domain NG829_06545 PF08669 Glycine cleavage T-protein C-terminal barrel domain NG829_06550 PF01597 Glycine cleavage H-protein NG829_06570 PF00732 GMC oxidoreductase NG829_06570 PF05199 GMC oxidoreductase NG829_06590 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NG829_06590 PF09317 Domain of unknown function (DUF1974) NG829_06590 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NG829_06590 PF02770 Acyl-CoA dehydrogenase, middle domain NG829_06600 PF00440 Bacterial regulatory proteins, tetR family NG829_06605 PF07715 TonB-dependent Receptor Plug Domain NG829_06605 PF00593 TonB dependent receptor NG829_06615 PF01430 Hsp33 protein NG829_06620 PF00912 Transglycosylase NG829_06625 PF00535 Glycosyl transferase family 2 NG829_06630 PF00571 CBS domain NG829_06645 PF03006 Haemolysin-III related NG829_06650 PF16658 Class II release factor RF3, C-terminal domain NG829_06650 PF00009 Elongation factor Tu GTP binding domain NG829_06660 PF00005 ABC transporter NG829_06665 PF00392 Bacterial regulatory proteins, gntR family NG829_06670 PF01476 LysM domain NG829_06670 PF08525 Opacity-associated protein A N-terminal motif NG829_06670 PF01551 Peptidase family M23 NG829_06675 PF00561 alpha/beta hydrolase fold NG829_06680 PF01053 Cys/Met metabolism PLP-dependent enzyme NG829_06685 PF00696 Amino acid kinase family NG829_06685 PF03447 Homoserine dehydrogenase, NAD binding domain NG829_06685 PF00742 Homoserine dehydrogenase NG829_06690 PF00553 Cellulose binding domain NG829_06690 PF00041 Fibronectin type III domain NG829_06690 PF00704 Glycosyl hydrolases family 18 NG829_06700 PF00561 alpha/beta hydrolase fold NG829_06700 PF08386 TAP-like protein NG829_06705 PF00990 Diguanylate cyclase, GGDEF domain NG829_06710 PF03315 Serine dehydratase beta chain NG829_06710 PF03313 Serine dehydratase alpha chain NG829_06725 PF01292 Prokaryotic cytochrome b561 NG829_06730 PF04264 YceI-like domain NG829_06735 PF17149 Periplasmic sensor domain found in signal transduction proteins NG829_06735 PF00672 HAMP domain NG829_06735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG829_06735 PF00512 His Kinase A (phospho-acceptor) domain NG829_06735 PF01627 Hpt domain NG829_06735 PF00072 Response regulator receiver domain NG829_06740 PF17149 Periplasmic sensor domain found in signal transduction proteins NG829_06740 PF00672 HAMP domain NG829_06740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG829_06740 PF00512 His Kinase A (phospho-acceptor) domain NG829_06740 PF01627 Hpt domain NG829_06740 PF00072 Response regulator receiver domain NG829_06745 PF07690 Major Facilitator Superfamily NG829_06750 PF01208 Uroporphyrinogen decarboxylase (URO-D) NG829_06760 PF12833 Helix-turn-helix domain NG829_06765 PF00857 Isochorismatase family NG829_06775 PF13533 Biotin-lipoyl like NG829_06780 PF00873 AcrB/AcrD/AcrF family NG829_06785 PF02321 Outer membrane efflux protein NG829_06790 PF07859 alpha/beta hydrolase fold NG829_06800 PF01761 3-dehydroquinate synthase NG829_06805 PF01202 Shikimate kinase NG829_06810 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region NG829_06810 PF01243 Pyridoxamine 5'-phosphate oxidase NG829_06820 PF07690 Major Facilitator Superfamily NG829_06825 PF00376 MerR family regulatory protein NG829_06825 PF09278 MerR, DNA binding NG829_06835 PF03807 NADP oxidoreductase coenzyme F420-dependent NG829_06835 PF14748 Pyrroline-5-carboxylate reductase dimerisation NG829_06845 PF01168 Alanine racemase, N-terminal domain NG829_06850 PF00437 Type II/IV secretion system protein NG829_06855 PF00437 Type II/IV secretion system protein NG829_06865 PF17151 Periplasmic sensor domain NG829_06865 PF00990 Diguanylate cyclase, GGDEF domain NG829_06885 PF18417 L-lysine epsilon oxidase C-terminal domain NG829_06885 PF17990 L-Lysine epsilon oxidase N-terminal NG829_06900 PF00958 GMP synthase C terminal domain NG829_06900 PF00117 Glutamine amidotransferase class-I NG829_06900 PF13302 Acetyltransferase (GNAT) domain NG829_06900 PF13673 Acetyltransferase (GNAT) domain NG829_06900 PF03352 Methyladenine glycosylase NG829_06910 PF02622 Uncharacterized ACR, COG1678 NG829_06915 PF03652 Holliday junction resolvase NG829_06920 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NG829_06920 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NG829_06930 PF00544 Pectate lyase NG829_06935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG829_06935 PF02203 Tar ligand binding domain homologue NG829_06935 PF00672 HAMP domain NG829_06940 PF00672 HAMP domain NG829_06940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG829_06940 PF02203 Tar ligand binding domain homologue NG829_06950 PF00324 Amino acid permease NG829_06955 PF03600 Citrate transporter NG829_06970 PF03448 MgtE intracellular N domain NG829_06970 PF00571 CBS domain NG829_06970 PF01769 Divalent cation transporter NG829_06975 PF05524 PEP-utilising enzyme, N-terminal NG829_06975 PF00391 PEP-utilising enzyme, mobile domain NG829_06975 PF02896 PEP-utilising enzyme, TIM barrel domain NG829_06980 PF00381 PTS HPr component phosphorylation site NG829_06990 PF03668 P-loop ATPase protein family NG829_06995 PF07475 HPr Serine kinase C-terminal domain NG829_06995 PF02603 HPr Serine kinase N terminus NG829_07000 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NG829_07005 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NG829_07010 PF00309 Sigma-54 factor, Activator interacting domain (AID) NG829_07010 PF04963 Sigma-54 factor, core binding domain NG829_07010 PF04552 Sigma-54, DNA binding domain NG829_07015 PF00005 ABC transporter NG829_07035 PF01380 SIS domain NG829_07035 PF00571 CBS domain NG829_07045 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NG829_07065 PF00551 Formyl transferase NG829_07080 PF00586 AIR synthase related protein, N-terminal domain NG829_07080 PF02769 AIR synthase related protein, C-terminal domain NG829_07090 PF01594 AI-2E family transporter NG829_07095 PF00308 Bacterial dnaA protein NG829_07100 PF00483 Nucleotidyl transferase NG829_07105 PF01636 Phosphotransferase enzyme family NG829_07130 PF00072 Response regulator receiver domain NG829_07130 PF00486 Transcriptional regulatory protein, C terminal NG829_07135 PF02424 ApbE family NG829_07140 PF13640 2OG-Fe(II) oxygenase superfamily NG829_07140 PF18331 PKHD-type hydroxylase C-terminal domain NG829_07145 PF07715 TonB-dependent Receptor Plug Domain NG829_07145 PF00593 TonB dependent receptor NG829_07150 PF00202 Aminotransferase class-III NG829_07160 PF02547 Queuosine biosynthesis protein NG829_07190 PF04397 LytTr DNA-binding domain NG829_07190 PF00072 Response regulator receiver domain NG829_07195 PF07694 5TMR of 5TMR-LYT NG829_07195 PF06580 Histidine kinase NG829_07205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NG829_07205 PF03466 LysR substrate binding domain NG829_07245 PF03653 Uncharacterised protein family (UPF0093) NG829_07255 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit NG829_07265 PF02811 PHP domain NG829_07265 PF01336 OB-fold nucleic acid binding domain NG829_07265 PF07733 Bacterial DNA polymerase III alpha NTPase domain NG829_07265 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NG829_07265 PF14579 Helix-hairpin-helix motif NG829_07270 PF01351 Ribonuclease HII NG829_07275 PF02684 Lipid-A-disaccharide synthetase NG829_07280 PF00132 Bacterial transferase hexapeptide (six repeats) NG829_07280 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 NG829_07285 PF07977 FabA-like domain NG829_07290 PF00132 Bacterial transferase hexapeptide (six repeats) NG829_07290 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD NG829_07295 PF01103 Surface antigen NG829_07295 PF07244 Surface antigen variable number repeat NG829_07300 PF17820 PDZ domain NG829_07300 PF02163 Peptidase family M50 NG829_07305 PF13288 DXP reductoisomerase C-terminal domain NG829_07305 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase NG829_07305 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain NG829_07315 PF01255 Putative undecaprenyl diphosphate synthase NG829_07320 PF01765 Ribosome recycling factor NG829_07325 PF00696 Amino acid kinase family NG829_07330 PF00990 Diguanylate cyclase, GGDEF domain NG829_07335 PF00889 Elongation factor TS NG829_07340 PF00318 Ribosomal protein S2 NG829_07375 PF00557 Metallopeptidase family M24 NG829_07380 PF08335 GlnD PII-uridylyltransferase NG829_07380 PF01966 HD domain NG829_07380 PF01909 Nucleotidyltransferase domain NG829_07385 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal NG829_07385 PF14602 Hexapeptide repeat of succinyl-transferase NG829_07385 PF00132 Bacterial transferase hexapeptide (six repeats) NG829_07400 PF03960 ArsC family NG829_07410 PF01546 Peptidase family M20/M25/M40 NG829_07410 PF07687 Peptidase dimerisation domain NG829_07415 PF13537 Glutamine amidotransferase domain NG829_07415 PF00733 Asparagine synthase NG829_07425 PF00990 Diguanylate cyclase, GGDEF domain NG829_07425 PF17151 Periplasmic sensor domain NG829_07430 PF00990 Diguanylate cyclase, GGDEF domain NG829_07440 PF01804 Penicillin amidase NG829_07445 PF00210 Ferritin-like domain NG829_07465 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NG829_07465 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NG829_07475 PF00202 Aminotransferase class-III NG829_07490 PF00171 Aldehyde dehydrogenase family NG829_07505 PF03989 DNA gyrase C-terminal domain, beta-propeller NG829_07505 PF00521 DNA gyrase/topoisomerase IV, subunit A NG829_07515 PF01047 MarR family NG829_07520 PF02321 Outer membrane efflux protein NG829_07525 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NG829_07525 PF00529 HlyD membrane-fusion protein of T1SS NG829_07530 PF07690 Major Facilitator Superfamily NG829_07555 PF06903 VirK protein NG829_07565 PF00575 S1 RNA binding domain NG829_07565 PF00773 RNB domain NG829_07565 PF08206 Ribonuclease B OB domain NG829_07565 PF08461 Ribonuclease R winged-helix domain NG829_07565 PF17876 Cold shock domain NG829_07575 PF00588 SpoU rRNA Methylase family NG829_07575 PF08032 RNA 2'-O ribose methyltransferase substrate binding NG829_07580 PF00990 Diguanylate cyclase, GGDEF domain NG829_07580 PF00072 Response regulator receiver domain NG829_07595 PF00929 Exonuclease NG829_07615 PF01895 PhoU domain NG829_07620 PF00005 ABC transporter NG829_07625 PF00528 Binding-protein-dependent transport system inner membrane component NG829_07630 PF00528 Binding-protein-dependent transport system inner membrane component NG829_07635 PF12849 PBP superfamily domain NG829_07640 PF12849 PBP superfamily domain NG829_07660 PF00730 HhH-GPD superfamily base excision DNA repair protein NG829_07660 PF10576 Iron-sulfur binding domain of endonuclease III NG829_07660 PF00633 Helix-hairpin-helix motif NG829_07670 PF00378 Enoyl-CoA hydratase/isomerase NG829_07675 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NG829_07675 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NG829_07680 PF00293 NUDIX domain NG829_07685 PF00581 Rhodanese-like domain NG829_07715 PF12848 ABC transporter NG829_07715 PF00005 ABC transporter NG829_07725 PF00072 Response regulator receiver domain NG829_07730 PF00672 HAMP domain NG829_07730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG829_07730 PF00512 His Kinase A (phospho-acceptor) domain NG829_07730 PF01627 Hpt domain NG829_07730 PF00072 Response regulator receiver domain NG829_07730 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NG829_07735 PF04286 Protein of unknown function (DUF445) NG829_07750 PF00171 Aldehyde dehydrogenase family NG829_07755 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NG829_07755 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NG829_07760 PF00202 Aminotransferase class-III NG829_07765 PF07883 Cupin domain NG829_07765 PF01381 Helix-turn-helix NG829_07770 PF00171 Aldehyde dehydrogenase family NG829_07780 PF00440 Bacterial regulatory proteins, tetR family NG829_07790 PF03352 Methyladenine glycosylase NG829_07800 PF02634 FdhD/NarQ family NG829_07805 PF00384 Molybdopterin oxidoreductase NG829_07815 PF07690 Major Facilitator Superfamily NG829_07815 PF00083 Sugar (and other) transporter NG829_07820 PF00990 Diguanylate cyclase, GGDEF domain NG829_07820 PF00072 Response regulator receiver domain NG829_07825 PF01266 FAD dependent oxidoreductase NG829_07830 PF00120 Glutamine synthetase, catalytic domain NG829_07835 PF07722 Peptidase C26 NG829_07840 PF00120 Glutamine synthetase, catalytic domain NG829_07845 PF00202 Aminotransferase class-III NG829_07850 PF13416 Bacterial extracellular solute-binding protein NG829_07855 PF13533 Biotin-lipoyl like NG829_07860 PF07690 Major Facilitator Superfamily NG829_07865 PF02321 Outer membrane efflux protein NG829_07870 PF00005 ABC transporter NG829_07870 PF08402 TOBE domain NG829_07875 PF00528 Binding-protein-dependent transport system inner membrane component NG829_07880 PF00528 Binding-protein-dependent transport system inner membrane component NG829_07885 PF00171 Aldehyde dehydrogenase family NG829_07900 PF00571 CBS domain NG829_07900 PF03471 Transporter associated domain NG829_07910 PF02130 Uncharacterized protein family UPF0054 NG829_07925 PF02562 PhoH-like protein NG829_07945 PF00919 Uncharacterized protein family UPF0004 NG829_07945 PF04055 Radical SAM superfamily NG829_07945 PF01938 TRAM domain NG829_07960 PF01464 Transglycosylase SLT domain NG829_07965 PF00355 Rieske [2Fe-2S] domain NG829_07965 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal NG829_07970 PF00032 Cytochrome b(C-terminal)/b6/petD NG829_07970 PF00033 Cytochrome b/b6/petB NG829_07975 PF02167 Cytochrome C1 family NG829_07980 PF00043 Glutathione S-transferase, C-terminal domain NG829_07980 PF02798 Glutathione S-transferase, N-terminal domain NG829_07985 PF04386 Stringent starvation protein B NG829_08000 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain NG829_08000 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain NG829_08010 PF00731 AIR carboxylase NG829_08015 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain NG829_08015 PF02222 ATP-grasp domain NG829_08020 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NG829_08020 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NG829_08025 PF00462 Glutaredoxin NG829_08030 PF00106 short chain dehydrogenase NG829_08035 PF01914 MarC family integral membrane protein NG829_08040 PF00593 TonB dependent receptor NG829_08045 PF11892 Domain of unknown function (DUF3412) NG829_08045 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases NG829_08045 PF03641 Possible lysine decarboxylase NG829_08050 PF07694 5TMR of 5TMR-LYT NG829_08050 PF06580 Histidine kinase NG829_08075 PF05567 Neisseria PilC beta-propeller domain NG829_08080 PF07963 Prokaryotic N-terminal methylation motif NG829_08080 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor NG829_08090 PF07963 Prokaryotic N-terminal methylation motif NG829_08090 PF00114 Pilin (bacterial filament) NG829_08095 PF00271 Helicase conserved C-terminal domain NG829_08095 PF04851 Type III restriction enzyme, res subunit NG829_08095 PF02151 UvrB/uvrC motif NG829_08095 PF12344 Ultra-violet resistance protein B NG829_08095 PF17757 UvrB interaction domain NG829_08110 PF02534 Type IV secretory system Conjugative DNA transfer NG829_08135 PF03743 Bacterial conjugation TrbI-like protein NG829_08140 PF00437 Type II/IV secretion system protein NG829_08150 PF04956 TrbC/VIRB2 family NG829_08155 PF05101 Type IV secretory pathway, VirB3-like protein NG829_08160 PF03135 CagE, TrbE, VirB family, component of type IV transporter system NG829_08185 PF00128 Alpha amylase, catalytic domain NG829_08195 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation NG829_08195 PF14508 Glycosyl-hydrolase 97 N-terminal NG829_08195 PF10566 Glycoside hydrolase 97 NG829_08210 PF00128 Alpha amylase, catalytic domain NG829_08210 PF00686 Starch binding domain NG829_08220 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NG829_08220 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NG829_08220 PF02824 TGS domain NG829_08220 PF03129 Anticodon binding domain NG829_08225 PF05198 Translation initiation factor IF-3, N-terminal domain NG829_08225 PF00707 Translation initiation factor IF-3, C-terminal domain NG829_08230 PF01632 Ribosomal protein L35 NG829_08235 PF00453 Ribosomal protein L20 NG829_08240 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain NG829_08240 PF01409 tRNA synthetases class II core domain (F) NG829_08245 PF03483 B3/4 domain NG829_08245 PF03484 tRNA synthetase B5 domain NG829_08245 PF03147 Ferredoxin-fold anticodon binding domain NG829_08245 PF01588 Putative tRNA binding domain NG829_08245 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain NG829_08250 PF00216 Bacterial DNA-binding protein NG829_08255 PF13411 MerR HTH family regulatory protein NG829_08500 PF06791 Prophage tail length tape measure protein NG829_08550 PF02397 Bacterial sugar transferase NG829_08565 PF00534 Glycosyl transferases group 1 NG829_08565 PF13439 Glycosyltransferase Family 4 NG829_08575 PF14667 Polysaccharide biosynthesis C-terminal domain NG829_08590 PF03808 Glycosyl transferase WecB/TagA/CpsF family NG829_08605 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NG829_08605 PF02779 Transketolase, pyrimidine binding domain NG829_08605 PF02780 Transketolase, C-terminal domain NG829_08615 PF02770 Acyl-CoA dehydrogenase, middle domain NG829_08615 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NG829_08615 PF12806 Acetyl-CoA dehydrogenase C-terminal like NG829_08615 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NG829_08620 PF00072 Response regulator receiver domain NG829_08620 PF00196 Bacterial regulatory proteins, luxR family NG829_08625 PF07730 Histidine kinase NG829_08625 PF17200 Single Cache domain 2 NG829_08630 PF03793 PASTA domain NG829_08630 PF00069 Protein kinase domain NG829_08645 PF00082 Subtilase family NG829_08650 PF00082 Subtilase family NG829_08655 PF13533 Biotin-lipoyl like NG829_08665 PF04632 Fusaric acid resistance protein family NG829_08670 PF01047 MarR family NG829_08690 PF08212 Lipocalin-like domain NG829_08700 PF13742 OB-fold nucleic acid binding domain NG829_08700 PF02601 Exonuclease VII, large subunit NG829_08705 PF08331 Domain of unknown function (DUF1730) NG829_08710 PF03853 YjeF-related protein N-terminus NG829_08710 PF01256 Carbohydrate kinase NG829_08715 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE NG829_08720 PF01520 N-acetylmuramoyl-L-alanine amidase NG829_08720 PF11741 AMIN domain NG829_08725 PF08676 MutL C terminal dimerisation domain NG829_08725 PF01119 DNA mismatch repair protein, C-terminal domain NG829_08740 PF07879 PHB/PHA accumulation regulator DNA-binding domain NG829_08740 PF05233 PHB accumulation regulatory domain NG829_08745 PF00106 short chain dehydrogenase NG829_08750 PF00749 tRNA synthetases class I (E and Q), catalytic domain NG829_08755 PF01435 Peptidase family M48 NG829_08760 PF00072 Response regulator receiver domain NG829_08760 PF00990 Diguanylate cyclase, GGDEF domain NG829_08760 PF00563 EAL domain NG829_08770 PF07152 YaeQ protein NG829_08775 PF00313 'Cold-shock' DNA-binding domain NG829_08780 PF02798 Glutathione S-transferase, N-terminal domain NG829_08780 PF00043 Glutathione S-transferase, C-terminal domain NG829_08785 PF00135 Carboxylesterase family NG829_08790 PF02696 Uncharacterized ACR, YdiU/UPF0061 family NG829_08795 PF13977 BetI-type transcriptional repressor, C-terminal NG829_08795 PF00440 Bacterial regulatory proteins, tetR family NG829_08800 PF00529 HlyD membrane-fusion protein of T1SS NG829_08800 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NG829_08805 PF00873 AcrB/AcrD/AcrF family NG829_08810 PF00156 Phosphoribosyl transferase domain NG829_08820 PF00271 Helicase conserved C-terminal domain NG829_08820 PF00270 DEAD/DEAH box helicase NG829_08820 PF03880 DbpA RNA binding domain NG829_08825 PF00005 ABC transporter NG829_08825 PF12848 ABC transporter NG829_08825 PF16326 ABC transporter C-terminal domain NG829_08835 PF00545 ribonuclease NG829_08840 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NG829_08840 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NG829_08850 PF00933 Glycosyl hydrolase family 3 N terminal domain NG829_08850 PF14310 Fibronectin type III-like domain NG829_08850 PF01915 Glycosyl hydrolase family 3 C-terminal domain NG829_08860 PF00854 POT family NG829_08895 PF08281 Sigma-70, region 4 NG829_08895 PF04542 Sigma-70 region 2 NG829_08900 PF00082 Subtilase family NG829_08910 PF01432 Peptidase family M3 NG829_08915 PF00255 Glutathione peroxidase NG829_08920 PF00970 Oxidoreductase FAD-binding domain NG829_08920 PF00175 Oxidoreductase NAD-binding domain NG829_08930 PF00005 ABC transporter NG829_08945 PF02627 Carboxymuconolactone decarboxylase family NG829_08950 PF04542 Sigma-70 region 2 NG829_08950 PF12680 SnoaL-like domain NG829_08950 PF08281 Sigma-70, region 4 NG829_08955 PF05681 Fumarate hydratase (Fumerase) NG829_08955 PF05683 Fumarase C-terminus NG829_08960 PF02798 Glutathione S-transferase, N-terminal domain NG829_08960 PF14497 Glutathione S-transferase, C-terminal domain NG829_08975 PF02253 Phospholipase A1 NG829_08985 PF00313 'Cold-shock' DNA-binding domain NG829_09000 PF00899 ThiF family NG829_09005 PF01590 GAF domain NG829_09005 PF00563 EAL domain NG829_09005 PF00990 Diguanylate cyclase, GGDEF domain NG829_09005 PF00360 Phytochrome region NG829_09010 PF01026 TatD related DNase NG829_09025 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NG829_09025 PF02770 Acyl-CoA dehydrogenase, middle domain NG829_09025 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NG829_09035 PF13417 Glutathione S-transferase, N-terminal domain NG829_09040 PF03358 NADPH-dependent FMN reductase NG829_09045 PF00772 DnaB-like helicase N terminal domain NG829_09045 PF03796 DnaB-like helicase C terminal domain NG829_09055 PF00875 DNA photolyase NG829_09055 PF03441 FAD binding domain of DNA photolyase NG829_09060 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain NG829_09060 PF06974 Protein of unknown function (DUF1298) NG829_09065 PF05736 OprF membrane domain NG829_09065 PF00691 OmpA family NG829_09070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NG829_09070 PF03466 LysR substrate binding domain NG829_09085 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NG829_09090 PF00873 AcrB/AcrD/AcrF family NG829_09095 PF00106 short chain dehydrogenase NG829_09100 PF02321 Outer membrane efflux protein NG829_09105 PF00990 Diguanylate cyclase, GGDEF domain NG829_09105 PF05230 MASE2 domain NG829_09145 PF00082 Subtilase family NG829_09150 PF01668 SmpB protein NG829_09160 PF03658 RnfH family Ubiquitin NG829_09165 PF04355 SmpA / OmlA family NG829_09170 PF01475 Ferric uptake regulator family NG829_09175 PF02463 RecF/RecN/SMC N terminal domain NG829_09180 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding NG829_09180 PF01628 HrcA protein C terminal domain NG829_09185 PF01025 GrpE NG829_09190 PF00012 Hsp70 protein NG829_09195 PF01556 DnaJ C terminal domain NG829_09195 PF00684 DnaJ central domain NG829_09195 PF00226 DnaJ domain NG829_09200 PF08543 Phosphomethylpyrimidine kinase NG829_09215 PF00005 ABC transporter NG829_09215 PF00664 ABC transporter transmembrane region NG829_09220 PF01205 Uncharacterized protein family UPF0029 NG829_09230 PF08281 Sigma-70, region 4 NG829_09230 PF04542 Sigma-70 region 2 NG829_09235 PF00563 EAL domain NG829_09235 PF00990 Diguanylate cyclase, GGDEF domain NG829_09235 PF03707 Bacterial signalling protein N terminal repeat NG829_09240 PF03641 Possible lysine decarboxylase NG829_09245 PF07992 Pyridine nucleotide-disulphide oxidoreductase NG829_09245 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NG829_09250 PF00364 Biotin-requiring enzyme NG829_09250 PF02817 e3 binding domain NG829_09250 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NG829_09255 PF02779 Transketolase, pyrimidine binding domain NG829_09255 PF16078 2-oxoglutarate dehydrogenase N-terminus NG829_09255 PF00676 Dehydrogenase E1 component NG829_09255 PF16870 2-oxoglutarate dehydrogenase C-terminal NG829_09275 PF08328 Adenylosuccinate lyase C-terminal NG829_09275 PF00206 Lyase NG829_09280 PF01595 Cyclin M transmembrane N-terminal domain NG829_09280 PF03471 Transporter associated domain NG829_09280 PF00571 CBS domain NG829_09290 PF00206 Lyase NG829_09290 PF10415 Fumarase C C-terminus NG829_09300 PF00155 Aminotransferase class I and II NG829_09305 PF00892 EamA-like transporter family NG829_09325 PF00005 ABC transporter NG829_09330 PF00392 Bacterial regulatory proteins, gntR family NG829_09340 PF00255 Glutathione peroxidase NG829_09345 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NG829_09345 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NG829_09350 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NG829_09350 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NG829_09350 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NG829_09355 PF04102 SlyX NG829_09365 PF01757 Acyltransferase family NG829_09375 PF16363 GDP-mannose 4,6 dehydratase NG829_09380 PF02310 B12 binding domain NG829_09380 PF02965 Vitamin B12 dependent methionine synthase, activation domain NG829_09380 PF00809 Pterin binding enzyme NG829_09380 PF02574 Homocysteine S-methyltransferase NG829_09380 PF02607 B12 binding domain NG829_09385 PF02310 B12 binding domain NG829_09385 PF02607 B12 binding domain NG829_09385 PF00809 Pterin binding enzyme NG829_09385 PF02574 Homocysteine S-methyltransferase NG829_09385 PF02965 Vitamin B12 dependent methionine synthase, activation domain NG829_09390 PF01209 ubiE/COQ5 methyltransferase family NG829_09395 PF02770 Acyl-CoA dehydrogenase, middle domain NG829_09395 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NG829_09395 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NG829_09400 PF00873 AcrB/AcrD/AcrF family NG829_09405 PF00529 HlyD membrane-fusion protein of T1SS NG829_09405 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NG829_09415 PF05088 Bacterial NAD-glutamate dehydrogenase NG829_09425 PF01513 ATP-NAD kinase NG829_09450 PF08411 Exonuclease C-terminal NG829_09450 PF00929 Exonuclease NG829_09455 PF01494 FAD binding domain NG829_09460 PF00266 Aminotransferase class-V NG829_09470 PF06052 3-hydroxyanthranilic acid dioxygenase NG829_09475 PF00484 Carbonic anhydrase NG829_09520 PF00072 Response regulator receiver domain NG829_09520 PF00196 Bacterial regulatory proteins, luxR family NG829_09540 PF01336 OB-fold nucleic acid binding domain NG829_09540 PF00152 tRNA synthetases class II (D, K and N) NG829_09545 PF01521 Iron-sulphur cluster biosynthesis NG829_09550 PF01250 Ribosomal protein S6 NG829_09555 PF01084 Ribosomal protein S18 NG829_09560 PF03948 Ribosomal protein L9, C-terminal domain NG829_09560 PF01281 Ribosomal protein L9, N-terminal domain NG829_09565 PF02463 RecF/RecN/SMC N terminal domain NG829_09570 PF04354 ZipA, C-terminal FtsZ-binding domain NG829_09575 PF00155 Aminotransferase class I and II NG829_09580 PF00533 BRCA1 C Terminus (BRCT) domain NG829_09580 PF12826 Helix-hairpin-helix motif NG829_09580 PF03119 NAD-dependent DNA ligase C4 zinc finger domain NG829_09580 PF03120 NAD-dependent DNA ligase OB-fold domain NG829_09580 PF01653 NAD-dependent DNA ligase adenylation domain NG829_09590 PF00152 tRNA synthetases class II (D, K and N) NG829_09600 PF01008 Initiation factor 2 subunit family NG829_09605 PF03989 DNA gyrase C-terminal domain, beta-propeller NG829_09605 PF00521 DNA gyrase/topoisomerase IV, subunit A NG829_09610 PF13360 PQQ-like domain NG829_09645 PF17392 Urocanase C-terminal domain NG829_09645 PF17391 Urocanase N-terminal domain NG829_09645 PF01175 Urocanase Rossmann-like domain NG829_09655 PF00221 Aromatic amino acid lyase NG829_09660 PF01979 Amidohydrolase family NG829_09670 PF07702 UTRA domain NG829_09670 PF00392 Bacterial regulatory proteins, gntR family NG829_09675 PF00106 short chain dehydrogenase NG829_09710 PF01794 Ferric reductase like transmembrane component NG829_09715 PF00174 Oxidoreductase molybdopterin binding domain NG829_09720 PF00266 Aminotransferase class-V NG829_09725 PF00800 Prephenate dehydratase NG829_09725 PF01842 ACT domain NG829_09725 PF01817 Chorismate mutase type II NG829_09730 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NG829_09740 PF03544 Gram-negative bacterial TonB protein C-terminal NG829_09745 PF02403 Seryl-tRNA synthetase N-terminal domain NG829_09745 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NG829_09750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NG829_09750 PF03466 LysR substrate binding domain NG829_09770 PF00005 ABC transporter NG829_09775 PF00239 Resolvase, N terminal domain NG829_09775 PF02796 Helix-turn-helix domain of resolvase NG829_09785 PF12833 Helix-turn-helix domain NG829_09785 PF12852 Cupin NG829_09840 PF00072 Response regulator receiver domain NG829_09840 PF00196 Bacterial regulatory proteins, luxR family NG829_09845 PF10150 Ribonuclease E/G family NG829_09845 PF12111 Polyribonucleotide phosphorylase C terminal NG829_09845 PF00575 S1 RNA binding domain NG829_09850 PF01479 S4 domain NG829_09850 PF00849 RNA pseudouridylate synthase NG829_09855 PF11737 Protein of unknown function (DUF3300) NG829_09860 PF02535 ZIP Zinc transporter NG829_09870 PF01329 Pterin 4 alpha carbinolamine dehydratase NG829_09875 PF01106 NifU-like domain NG829_09885 PF00034 Cytochrome c NG829_09895 PF00529 HlyD membrane-fusion protein of T1SS NG829_09895 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NG829_09900 PF00873 AcrB/AcrD/AcrF family NG829_09905 PF00873 AcrB/AcrD/AcrF family NG829_09915 PF00795 Carbon-nitrogen hydrolase NG829_09920 PF04371 Porphyromonas-type peptidyl-arginine deiminase NG829_09930 PF00444 Ribosomal protein L36 NG829_09935 PF02224 Cytidylate kinase NG829_09940 PF00575 S1 RNA binding domain NG829_09945 PF00216 Bacterial DNA-binding protein NG829_09955 PF18073 Rubredoxin metal binding domain NG829_09960 PF00953 Glycosyl transferase family 4 NG829_09965 PF02719 Polysaccharide biosynthesis protein NG829_09970 PF00483 Nucleotidyl transferase NG829_09975 PF02803 Thiolase, C-terminal domain NG829_09975 PF00108 Thiolase, N-terminal domain NG829_09980 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NG829_09980 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NG829_09980 PF00378 Enoyl-CoA hydratase/isomerase NG829_09990 PF00334 Nucleoside diphosphate kinase NG829_09995 PF04055 Radical SAM superfamily NG829_10005 PF13464 Domain of unknown function (DUF4115) NG829_10010 PF09976 Tetratricopeptide repeat-like domain NG829_10015 PF01011 PQQ enzyme repeat NG829_10015 PF13360 PQQ-like domain NG829_10020 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NG829_10020 PF01926 50S ribosome-binding GTPase NG829_10025 PF12804 MobA-like NTP transferase domain NG829_10030 PF00994 Probable molybdopterin binding domain NG829_10030 PF03454 MoeA C-terminal region (domain IV) NG829_10030 PF03453 MoeA N-terminal region (domain I and II) NG829_10035 PF00899 ThiF family NG829_10040 PF02254 TrkA-N domain NG829_10040 PF00999 Sodium/hydrogen exchanger family NG829_10045 PF12146 Serine aminopeptidase, S33 NG829_10055 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NG829_10055 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NG829_10060 PF00478 IMP dehydrogenase / GMP reductase domain NG829_10060 PF00571 CBS domain NG829_10065 PF02540 NAD synthase NG829_10065 PF00958 GMP synthase C terminal domain NG829_10065 PF00117 Glutamine amidotransferase class-I NG829_10075 PF03358 NADPH-dependent FMN reductase NG829_10095 PF01638 HxlR-like helix-turn-helix NG829_10100 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) NG829_10105 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus NG829_10105 PF00361 Proton-conducting membrane transporter NG829_10105 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NG829_10110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NG829_10110 PF03466 LysR substrate binding domain NG829_10130 PF00989 PAS fold NG829_10130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG829_10130 PF00512 His Kinase A (phospho-acceptor) domain NG829_10130 PF16736 Single Cache-like NG829_10160 PF18029 Glyoxalase-like domain NG829_10170 PF01566 Natural resistance-associated macrophage protein NG829_10175 PF02742 Iron dependent repressor, metal binding and dimerisation domain NG829_10175 PF01325 Iron dependent repressor, N-terminal DNA binding domain NG829_10180 PF14437 MafB19-like deaminase NG829_10185 PF00929 Exonuclease NG829_10190 PF00924 Mechanosensitive ion channel NG829_10190 PF05552 Conserved TM helix NG829_10195 PF00391 PEP-utilising enzyme, mobile domain NG829_10195 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NG829_10195 PF02896 PEP-utilising enzyme, TIM barrel domain NG829_10200 PF03618 Kinase/pyrophosphorylase NG829_10230 PF01066 CDP-alcohol phosphatidyltransferase NG829_10240 PF00561 alpha/beta hydrolase fold NG829_10245 PF17263 Family of unknown function (DUF5329) NG829_10250 PF04024 PspC domain NG829_10260 PF01266 FAD dependent oxidoreductase NG829_10260 PF05430 S-adenosyl-L-methionine-dependent methyltransferase NG829_10270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG829_10270 PF13426 PAS domain NG829_10270 PF00072 Response regulator receiver domain NG829_10275 PF00575 S1 RNA binding domain NG829_10275 PF17674 HHH domain NG829_10275 PF09371 Tex-like protein N-terminal domain NG829_10275 PF16921 Tex protein YqgF-like domain NG829_10280 PF00072 Response regulator receiver domain NG829_10280 PF01627 Hpt domain NG829_10280 PF00512 His Kinase A (phospho-acceptor) domain NG829_10280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG829_10280 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NG829_10280 PF00672 HAMP domain NG829_10320 PF00873 AcrB/AcrD/AcrF family NG829_10335 PF02321 Outer membrane efflux protein NG829_10340 PF00072 Response regulator receiver domain NG829_10340 PF00486 Transcriptional regulatory protein, C terminal NG829_10345 PF00672 HAMP domain NG829_10345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG829_10345 PF00512 His Kinase A (phospho-acceptor) domain NG829_10365 PF07728 AAA domain (dynein-related subfamily) NG829_10375 PF05762 VWA domain containing CoxE-like protein NG829_10415 PF01494 FAD binding domain NG829_10420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NG829_10420 PF03466 LysR substrate binding domain NG829_10445 PF00005 ABC transporter NG829_10470 PF00005 ABC transporter NG829_10470 PF00664 ABC transporter transmembrane region NG829_10490 PF13579 Glycosyl transferase 4-like domain NG829_10490 PF00534 Glycosyl transferases group 1 NG829_10495 PF13439 Glycosyltransferase Family 4 NG829_10495 PF00534 Glycosyl transferases group 1 NG829_10505 PF08241 Methyltransferase domain NG829_10510 PF01979 Amidohydrolase family NG829_10510 PF13382 Adenine deaminase C-terminal domain NG829_10515 PF08241 Methyltransferase domain NG829_10530 PF00535 Glycosyl transferase family 2 NG829_10535 PF01943 Polysaccharide biosynthesis protein NG829_10540 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NG829_10560 PF05523 WxcM-like, C-terminal NG829_10575 PF00034 Cytochrome c NG829_10585 PF04542 Sigma-70 region 2 NG829_10585 PF08281 Sigma-70, region 4 NG829_10595 PF00082 Subtilase family NG829_10600 PF01578 Cytochrome C assembly protein NG829_10610 PF03100 CcmE NG829_10615 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal NG829_10615 PF01578 Cytochrome C assembly protein NG829_10620 PF08534 Redoxin NG829_10625 PF03918 Cytochrome C biogenesis protein NG829_10635 PF00072 Response regulator receiver domain NG829_10655 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NG829_10660 PF00004 ATPase family associated with various cellular activities (AAA) NG829_10660 PF16193 AAA C-terminal domain NG829_10660 PF12002 MgsA AAA+ ATPase C terminal NG829_10665 PF01545 Cation efflux family NG829_10670 PF03548 Outer membrane lipoprotein carrier protein LolA NG829_10680 PF17854 FtsK alpha domain NG829_10680 PF01580 FtsK/SpoIIIE family NG829_10680 PF13491 4TM region of DNA translocase FtsK/SpoIIIE NG829_10680 PF09397 Ftsk gamma domain NG829_10685 PF07992 Pyridine nucleotide-disulphide oxidoreductase NG829_10695 PF03588 Leucyl/phenylalanyl-tRNA protein transferase NG829_10700 PF01176 Translation initiation factor 1A / IF-1 NG829_10705 PF02861 Clp amino terminal domain, pathogenicity island component NG829_10705 PF17871 AAA lid domain NG829_10705 PF07724 AAA domain (Cdc48 subfamily) NG829_10705 PF00004 ATPase family associated with various cellular activities (AAA) NG829_10705 PF10431 C-terminal, D2-small domain, of ClpB protein NG829_10710 PF02617 ATP-dependent Clp protease adaptor protein ClpS NG829_10720 PF00293 NUDIX domain NG829_10730 PF04356 Protein of unknown function (DUF489) NG829_10735 PF00672 HAMP domain NG829_10735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG829_10735 PF12729 Four helix bundle sensory module for signal transduction NG829_10745 PF00005 ABC transporter NG829_10755 PF00990 Diguanylate cyclase, GGDEF domain NG829_10755 PF03707 Bacterial signalling protein N terminal repeat NG829_10755 PF00563 EAL domain NG829_10760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG829_10760 PF07730 Histidine kinase NG829_10765 PF00563 EAL domain NG829_10765 PF03707 Bacterial signalling protein N terminal repeat NG829_10765 PF00990 Diguanylate cyclase, GGDEF domain NG829_10770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG829_10770 PF00512 His Kinase A (phospho-acceptor) domain NG829_10790 PF01584 CheW-like domain NG829_10790 PF00072 Response regulator receiver domain NG829_10800 PF00460 Flagella basal body rod protein NG829_10800 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NG829_10810 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NG829_10810 PF00460 Flagella basal body rod protein NG829_10810 PF07559 Flagellar basal body protein FlaE NG829_10815 PF00460 Flagella basal body rod protein NG829_10815 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NG829_10820 PF00460 Flagella basal body rod protein NG829_10820 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NG829_10825 PF02107 Flagellar L-ring protein NG829_10830 PF02119 Flagellar P-ring protein NG829_10835 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase NG829_10835 PF10135 Rod binding protein NG829_10840 PF07196 Flagellin hook IN motif NG829_10840 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NG829_10850 PF00700 Bacterial flagellin C-terminal helical region NG829_10850 PF00669 Bacterial flagellin N-terminal helical region NG829_10855 PF00700 Bacterial flagellin C-terminal helical region NG829_10855 PF00669 Bacterial flagellin N-terminal helical region NG829_10860 PF00700 Bacterial flagellin C-terminal helical region NG829_10860 PF00669 Bacterial flagellin N-terminal helical region NG829_10870 PF02561 Flagellar protein FliS NG829_10885 PF00196 Bacterial regulatory proteins, luxR family NG829_10885 PF00072 Response regulator receiver domain NG829_10890 PF00309 Sigma-54 factor, Activator interacting domain (AID) NG829_10890 PF04963 Sigma-54 factor, core binding domain NG829_10890 PF04552 Sigma-54, DNA binding domain NG829_10895 PF01339 CheB methylesterase NG829_10895 PF00072 Response regulator receiver domain NG829_10900 PF00158 Sigma-54 interaction domain NG829_10900 PF06490 Flagellar regulatory protein FleQ NG829_10900 PF02954 Bacterial regulatory protein, Fis family NG829_10905 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NG829_10915 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NG829_10915 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NG829_10955 PF00534 Glycosyl transferases group 1 NG829_10955 PF00535 Glycosyl transferase family 2 NG829_10960 PF02049 Flagellar hook-basal body complex protein FliE NG829_10965 PF01514 Secretory protein of YscJ/FliF family NG829_10965 PF08345 Flagellar M-ring protein C-terminal NG829_10970 PF01706 FliG C-terminal domain NG829_10970 PF14841 FliG middle domain NG829_10970 PF14842 FliG N-terminal domain NG829_10980 PF18269 T3SS EscN ATPase C-terminal domain NG829_10980 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NG829_11000 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NG829_11000 PF02154 Flagellar motor switch protein FliM NG829_11005 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NG829_11010 PF04347 Flagellar biosynthesis protein, FliO NG829_11015 PF00813 FliP family NG829_11020 PF01313 Bacterial export proteins, family 3 NG829_11030 PF01311 Bacterial export proteins, family 1 NG829_11040 PF01312 FlhB HrpN YscU SpaS Family NG829_11045 PF00771 FHIPEP family NG829_11050 PF00448 SRP54-type protein, GTPase domain NG829_11055 PF10609 NUBPL iron-transfer P-loop NTPase NG829_11060 PF04545 Sigma-70, region 4 NG829_11060 PF04542 Sigma-70 region 2 NG829_11060 PF04539 Sigma-70 region 3 NG829_11065 PF00072 Response regulator receiver domain NG829_11070 PF04344 Chemotaxis phosphatase, CheZ NG829_11075 PF00072 Response regulator receiver domain NG829_11075 PF01627 Hpt domain NG829_11075 PF01584 CheW-like domain NG829_11075 PF02895 Signal transducing histidine kinase, homodimeric domain NG829_11075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG829_11080 PF01618 MotA/TolQ/ExbB proton channel family NG829_11085 PF13677 Membrane MotB of proton-channel complex MotA/MotB NG829_11085 PF00691 OmpA family NG829_11090 PF13614 AAA domain NG829_11095 PF01584 CheW-like domain NG829_11105 PF00072 Response regulator receiver domain NG829_11110 PF01584 CheW-like domain NG829_11110 PF02895 Signal transducing histidine kinase, homodimeric domain NG829_11110 PF01627 Hpt domain NG829_11110 PF09078 CheY binding NG829_11110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG829_11115 PF00672 HAMP domain NG829_11115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG829_11115 PF02203 Tar ligand binding domain homologue NG829_11120 PF00672 HAMP domain NG829_11120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG829_11120 PF02203 Tar ligand binding domain homologue NG829_11125 PF02203 Tar ligand binding domain homologue NG829_11125 PF00672 HAMP domain NG829_11125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG829_11130 PF00672 HAMP domain NG829_11130 PF02203 Tar ligand binding domain homologue NG829_11130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG829_11140 PF02203 Tar ligand binding domain homologue NG829_11140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG829_11140 PF00672 HAMP domain NG829_11145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG829_11145 PF02203 Tar ligand binding domain homologue NG829_11145 PF00672 HAMP domain NG829_11150 PF00672 HAMP domain NG829_11150 PF02203 Tar ligand binding domain homologue NG829_11150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG829_11160 PF00672 HAMP domain NG829_11160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG829_11160 PF02203 Tar ligand binding domain homologue NG829_11170 PF02203 Tar ligand binding domain homologue NG829_11170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG829_11170 PF00672 HAMP domain NG829_11175 PF07238 PilZ domain NG829_11175 PF07317 Flagellar regulator YcgR NG829_11180 PF01584 CheW-like domain NG829_11190 PF00672 HAMP domain NG829_11190 PF02203 Tar ligand binding domain homologue NG829_11190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG829_11195 PF00672 HAMP domain NG829_11195 PF17200 Single Cache domain 2 NG829_11195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG829_11200 PF00672 HAMP domain NG829_11200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG829_11200 PF02203 Tar ligand binding domain homologue NG829_11205 PF01739 CheR methyltransferase, SAM binding domain NG829_11205 PF03705 CheR methyltransferase, all-alpha domain NG829_11210 PF03975 CheD chemotactic sensory transduction NG829_11215 PF01339 CheB methylesterase NG829_11215 PF00072 Response regulator receiver domain NG829_11220 PF03707 Bacterial signalling protein N terminal repeat NG829_11220 PF00990 Diguanylate cyclase, GGDEF domain NG829_11220 PF00563 EAL domain NG829_11225 PF11791 Aconitate B N-terminal domain NG829_11225 PF00330 Aconitase family (aconitate hydratase) NG829_11225 PF06434 Aconitate hydratase 2 N-terminus NG829_11240 PF00330 Aconitase family (aconitate hydratase) NG829_11240 PF00694 Aconitase C-terminal domain NG829_11245 PF00501 AMP-binding enzyme NG829_11245 PF13193 AMP-binding enzyme C-terminal domain NG829_11250 PF00378 Enoyl-CoA hydratase/isomerase NG829_11255 PF00072 Response regulator receiver domain NG829_11255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG829_11255 PF01627 Hpt domain NG829_11255 PF00512 His Kinase A (phospho-acceptor) domain NG829_11260 PF00072 Response regulator receiver domain NG829_11265 PF00152 tRNA synthetases class II (D, K and N) NG829_11265 PF01336 OB-fold nucleic acid binding domain NG829_11275 PF04397 LytTr DNA-binding domain NG829_11275 PF00072 Response regulator receiver domain NG829_11280 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) NG829_11295 PF03449 Transcription elongation factor, N-terminal NG829_11295 PF01272 Transcription elongation factor, GreA/GreB, C-term NG829_11300 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NG829_11300 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NG829_11300 PF02142 MGS-like domain NG829_11310 PF00117 Glutamine amidotransferase class-I NG829_11310 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain NG829_11315 PF05173 Dihydrodipicolinate reductase, C-terminus NG829_11315 PF01113 Dihydrodipicolinate reductase, N-terminus NG829_11320 PF03475 3-alpha domain NG829_11320 PF03473 MOSC domain NG829_11325 PF00155 Aminotransferase class I and II NG829_11335 PF07670 Nucleoside recognition NG829_11335 PF07664 Ferrous iron transport protein B C terminus NG829_11335 PF02421 Ferrous iron transport protein B NG829_11345 PF00378 Enoyl-CoA hydratase/isomerase NG829_11355 PF00682 HMGL-like NG829_11360 PF00106 short chain dehydrogenase NG829_11365 PF01132 Elongation factor P (EF-P) OB domain NG829_11365 PF08207 Elongation factor P (EF-P) KOW-like domain NG829_11365 PF09285 Elongation factor P, C-terminal NG829_11385 PF02913 FAD linked oxidases, C-terminal domain NG829_11385 PF01565 FAD binding domain NG829_11390 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NG829_11390 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NG829_11400 PF13520 Amino acid permease NG829_11405 PF13520 Amino acid permease NG829_11410 PF00596 Class II Aldolase and Adducin N-terminal domain NG829_11415 PF03079 ARD/ARD' family NG829_11435 PF01502 Phosphoribosyl-AMP cyclohydrolase NG829_11435 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase NG829_11440 PF00977 Histidine biosynthesis protein NG829_11445 PF00977 Histidine biosynthesis protein NG829_11450 PF00117 Glutamine amidotransferase class-I NG829_11455 PF00475 Imidazoleglycerol-phosphate dehydratase NG829_11460 PF00155 Aminotransferase class I and II NG829_11465 PF00815 Histidinol dehydrogenase NG829_11470 PF01634 ATP phosphoribosyltransferase NG829_11470 PF08029 HisG, C-terminal domain NG829_11490 PF03129 Anticodon binding domain NG829_11490 PF13393 Histidyl-tRNA synthetase NG829_11495 PF00027 Cyclic nucleotide-binding domain NG829_11495 PF13545 Crp-like helix-turn-helix domain NG829_11505 PF00291 Pyridoxal-phosphate dependent enzyme NG829_11505 PF14821 Threonine synthase N terminus NG829_11515 PF08544 GHMP kinases C terminal NG829_11515 PF00288 GHMP kinases N terminal domain NG829_11520 PF00742 Homoserine dehydrogenase NG829_11520 PF13840 ACT domain NG829_11520 PF01842 ACT domain NG829_11520 PF03447 Homoserine dehydrogenase, NAD binding domain NG829_11520 PF00696 Amino acid kinase family NG829_11535 PF00171 Aldehyde dehydrogenase family NG829_11550 PF01180 Dihydroorotate dehydrogenase NG829_11555 PF01565 FAD binding domain NG829_11555 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain NG829_11565 PF01177 Asp/Glu/Hydantoin racemase NG829_11575 PF01569 PAP2 superfamily NG829_11580 PF04551 GcpE protein NG829_11585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG829_11585 PF00512 His Kinase A (phospho-acceptor) domain NG829_11590 PF00072 Response regulator receiver domain NG829_11595 PF00990 Diguanylate cyclase, GGDEF domain NG829_11595 PF00563 EAL domain NG829_11595 PF03707 Bacterial signalling protein N terminal repeat NG829_11600 PF00474 Sodium:solute symporter family NG829_11605 PF14310 Fibronectin type III-like domain NG829_11605 PF01915 Glycosyl hydrolase family 3 C-terminal domain NG829_11605 PF00933 Glycosyl hydrolase family 3 N terminal domain NG829_11625 PF03527 RHS protein NG829_11625 PF05593 RHS Repeat NG829_11640 PF05785 Rho-activating domain of cytotoxic necrotizing factor NG829_11640 PF18807 Tripartite Tc toxins repeat NG829_11650 PF03527 RHS protein NG829_11650 PF05593 RHS Repeat NG829_11660 PF03150 Di-haem cytochrome c peroxidase NG829_11670 PF00342 Phosphoglucose isomerase NG829_11675 PF02261 Aspartate decarboxylase NG829_11680 PF02569 Pantoate-beta-alanine ligase NG829_11685 PF02548 Ketopantoate hydroxymethyltransferase NG829_11690 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NG829_11695 PF12626 Polymerase A arginine-rich C-terminus NG829_11695 PF01743 Poly A polymerase head domain NG829_11695 PF12627 Probable RNA and SrmB- binding site of polymerase A NG829_11705 PF02649 Type I GTP cyclohydrolase folE2 NG829_11710 PF00083 Sugar (and other) transporter NG829_11720 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NG829_11720 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NG829_11725 PF01055 Glycosyl hydrolases family 31 NG829_11725 PF17137 Domain of unknown function (DUF5110) NG829_11725 PF16338 Domain of unknown function (DUF4968) NG829_11745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NG829_11745 PF03466 LysR substrate binding domain NG829_11750 PF01081 KDPG and KHG aldolase NG829_11755 PF13378 Enolase C-terminal domain-like NG829_11755 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NG829_11760 PF08450 SMP-30/Gluconolactonase/LRE-like region NG829_11765 PF05035 2-keto-3-deoxy-galactonokinase NG829_11770 PF00037 4Fe-4S binding domain NG829_11770 PF11953 Domain of unknown function (DUF3470) NG829_11780 PF00701 Dihydrodipicolinate synthetase family NG829_11790 PF00578 AhpC/TSA family NG829_11795 PF13638 PIN domain NG829_11795 PF02562 PhoH-like protein NG829_11810 PF08543 Phosphomethylpyrimidine kinase NG829_11810 PF02581 Thiamine monophosphate synthase NG829_11830 PF00106 short chain dehydrogenase NG829_11840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NG829_11840 PF03466 LysR substrate binding domain NG829_11845 PF02678 Pirin NG829_11845 PF17954 Quercetinase C-terminal cupin domain NG829_11850 PF00128 Alpha amylase, catalytic domain NG829_11850 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NG829_11880 PF02599 Global regulator protein family NG829_11885 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NG829_11885 PF01411 tRNA synthetases class II (A) NG829_11885 PF02272 DHHA1 domain NG829_11890 PF02631 RecX family NG829_11895 PF00154 recA bacterial DNA recombination protein NG829_11900 PF01726 LexA DNA binding domain NG829_11900 PF00717 Peptidase S24-like NG829_11905 PF03109 ABC1 family NG829_11910 PF02464 Competence-damaged protein NG829_11915 PF13167 GTP-binding GTPase N-terminal NG829_11915 PF01926 50S ribosome-binding GTPase NG829_11915 PF16360 GTP-binding GTPase Middle Region NG829_11920 PF17209 Hfq protein NG829_11930 PF00809 Pterin binding enzyme NG829_11935 PF06480 FtsH Extracellular NG829_11935 PF01434 Peptidase family M41 NG829_11935 PF00004 ATPase family associated with various cellular activities (AAA) NG829_11935 PF17862 AAA+ lid domain NG829_11940 PF01728 FtsJ-like methyltransferase NG829_11945 PF01985 CRS1 / YhbY (CRM) domain NG829_11955 PF01551 Peptidase family M23 NG829_11955 PF01476 LysM domain NG829_11960 PF09335 SNARE associated Golgi protein NG829_11970 PF01975 Survival protein SurE NG829_11975 PF01713 Smr domain NG829_11985 PF04542 Sigma-70 region 2 NG829_11985 PF08281 Sigma-70, region 4 NG829_11995 PF00593 TonB dependent receptor NG829_11995 PF07715 TonB-dependent Receptor Plug Domain NG829_12000 PF01142 tRNA pseudouridine synthase D (TruD) NG829_12005 PF02542 YgbB family NG829_12015 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NG829_12020 PF04977 Septum formation initiator NG829_12025 PF03952 Enolase, N-terminal domain NG829_12025 PF00113 Enolase, C-terminal TIM barrel domain NG829_12035 PF00793 DAHP synthetase I family NG829_12045 PF00117 Glutamine amidotransferase class-I NG829_12045 PF06418 CTP synthase N-terminus NG829_12055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG829_12055 PF00986 DNA gyrase B subunit, carboxyl terminus NG829_12055 PF00204 DNA gyrase B NG829_12055 PF01751 Toprim domain NG829_12060 PF02611 CDP-diacylglycerol pyrophosphatase NG829_12070 PF01384 Phosphate transporter family NG829_12095 PF00296 Luciferase-like monooxygenase NG829_12105 PF00581 Rhodanese-like domain NG829_12105 PF17773 UPF0176 acylphosphatase like domain NG829_12115 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NG829_12125 PF08448 PAS fold NG829_12125 PF00563 EAL domain NG829_12125 PF00990 Diguanylate cyclase, GGDEF domain NG829_12125 PF05231 MASE1 NG829_12125 PF13426 PAS domain NG829_12125 PF08447 PAS fold NG829_12135 PF01645 Conserved region in glutamate synthase NG829_12140 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NG829_12140 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NG829_12140 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NG829_12155 PF00356 Bacterial regulatory proteins, lacI family NG829_12160 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NG829_12160 PF00381 PTS HPr component phosphorylation site NG829_12160 PF00391 PEP-utilising enzyme, mobile domain NG829_12160 PF02896 PEP-utilising enzyme, TIM barrel domain NG829_12160 PF05524 PEP-utilising enzyme, N-terminal NG829_12165 PF00294 pfkB family carbohydrate kinase NG829_12170 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NG829_12180 PF00486 Transcriptional regulatory protein, C terminal NG829_12180 PF00072 Response regulator receiver domain NG829_12185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG829_12185 PF00512 His Kinase A (phospho-acceptor) domain NG829_12200 PF00005 ABC transporter NG829_12200 PF12704 MacB-like periplasmic core domain NG829_12200 PF02687 FtsX-like permease family NG829_12240 PF00550 Phosphopantetheine attachment site NG829_12245 PF02801 Beta-ketoacyl synthase, C-terminal domain NG829_12245 PF00109 Beta-ketoacyl synthase, N-terminal domain NG829_12250 PF00202 Aminotransferase class-III NG829_12260 PF08240 Alcohol dehydrogenase GroES-like domain NG829_12260 PF00107 Zinc-binding dehydrogenase NG829_12265 PF00107 Zinc-binding dehydrogenase NG829_12265 PF08240 Alcohol dehydrogenase GroES-like domain NG829_12270 PF00440 Bacterial regulatory proteins, tetR family NG829_12270 PF16925 Tetracyclin repressor-like, C-terminal domain NG829_12310 PF06969 HemN C-terminal domain NG829_12310 PF04055 Radical SAM superfamily NG829_12325 PF12801 4Fe-4S binding domain NG829_12325 PF13746 4Fe-4S dicluster domain NG829_12325 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase NG829_12385 PF01066 CDP-alcohol phosphatidyltransferase NG829_12390 PF01541 GIY-YIG catalytic domain NG829_12390 PF02151 UvrB/uvrC motif NG829_12390 PF08459 UvrC Helix-hairpin-helix N-terminal NG829_12400 PF01451 Low molecular weight phosphotyrosine protein phosphatase NG829_12405 PF02348 Cytidylyltransferase NG829_12410 PF02606 Tetraacyldisaccharide-1-P 4'-kinase NG829_12415 PF00005 ABC transporter NG829_12415 PF00664 ABC transporter transmembrane region NG829_12420 PF02472 Biopolymer transport protein ExbD/TolR NG829_12425 PF01618 MotA/TolQ/ExbB proton channel family NG829_12430 PF03772 Competence protein NG829_12430 PF00753 Metallo-beta-lactamase superfamily NG829_12440 PF00005 ABC transporter NG829_12445 PF02687 FtsX-like permease family NG829_12445 PF12704 MacB-like periplasmic core domain NG829_12455 PF03937 Flavinator of succinate dehydrogenase NG829_12460 PF13085 2Fe-2S iron-sulfur cluster binding domain NG829_12460 PF13237 4Fe-4S dicluster domain NG829_12465 PF02910 Fumarate reductase flavoprotein C-term NG829_12465 PF00890 FAD binding domain NG829_12470 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NG829_12475 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NG829_12485 PF01571 Aminomethyltransferase folate-binding domain NG829_12490 PF00005 ABC transporter NG829_12490 PF08402 TOBE domain NG829_12495 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain NG829_12495 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain NG829_12500 PF02685 Glucokinase NG829_12505 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NG829_12510 PF00920 Dehydratase family NG829_12515 PF01081 KDPG and KHG aldolase NG829_12525 PF00528 Binding-protein-dependent transport system inner membrane component NG829_12530 PF00528 Binding-protein-dependent transport system inner membrane component NG829_12535 PF13416 Bacterial extracellular solute-binding protein NG829_12550 PF00356 Bacterial regulatory proteins, lacI family NG829_12560 PF03795 YCII-related domain NG829_12565 PF02616 Segregation and condensation protein ScpA NG829_12570 PF04079 Segregation and condensation complex subunit ScpB NG829_12575 PF01479 S4 domain NG829_12575 PF00849 RNA pseudouridylate synthase NG829_12590 PF02611 CDP-diacylglycerol pyrophosphatase NG829_12595 PF13018 Extended Signal Peptide of Type V secretion system NG829_12595 PF03895 YadA-like membrane anchor domain NG829_12595 PF05658 Head domain of trimeric autotransporter adhesin NG829_12595 PF05662 Coiled stalk of trimeric autotransporter adhesin NG829_12620 PF00196 Bacterial regulatory proteins, luxR family NG829_12620 PF00072 Response regulator receiver domain NG829_12625 PF00072 Response regulator receiver domain NG829_12625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG829_12625 PF00512 His Kinase A (phospho-acceptor) domain NG829_12625 PF09456 RcsC Alpha-Beta-Loop (ABL) NG829_12630 PF00990 Diguanylate cyclase, GGDEF domain NG829_12630 PF13185 GAF domain NG829_12630 PF00563 EAL domain NG829_12640 PF00795 Carbon-nitrogen hydrolase NG829_12645 PF00155 Aminotransferase class I and II NG829_12650 PF00005 ABC transporter NG829_12655 PF03379 CcmB protein NG829_12660 PF01578 Cytochrome C assembly protein NG829_12670 PF03100 CcmE NG829_12675 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal NG829_12675 PF01578 Cytochrome C assembly protein NG829_12680 PF08534 Redoxin NG829_12685 PF03918 Cytochrome C biogenesis protein NG829_12695 PF00561 alpha/beta hydrolase fold NG829_12700 PF00082 Subtilase family NG829_12700 PF04151 Bacterial pre-peptidase C-terminal domain NG829_12705 PF00664 ABC transporter transmembrane region NG829_12705 PF00005 ABC transporter NG829_12710 PF00005 ABC transporter NG829_12710 PF00664 ABC transporter transmembrane region NG829_12715 PF01654 Cytochrome bd terminal oxidase subunit I NG829_12720 PF02322 Cytochrome bd terminal oxidase subunit II NG829_12740 PF00529 HlyD membrane-fusion protein of T1SS NG829_12745 PF00005 ABC transporter NG829_12745 PF03412 Peptidase C39 family NG829_12745 PF00664 ABC transporter transmembrane region NG829_12760 PF02129 X-Pro dipeptidyl-peptidase (S15 family) NG829_12760 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain NG829_12765 PF00171 Aldehyde dehydrogenase family NG829_12770 PF00696 Amino acid kinase family NG829_12770 PF01472 PUA domain NG829_12780 PF00206 Lyase NG829_12785 PF01118 Semialdehyde dehydrogenase, NAD binding domain NG829_12795 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase NG829_12795 PF00696 Amino acid kinase family NG829_12800 PF01546 Peptidase family M20/M25/M40 NG829_12800 PF07687 Peptidase dimerisation domain NG829_12810 PF00764 Arginosuccinate synthase NG829_12815 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NG829_12815 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NG829_12825 PF01406 tRNA synthetases class I (C) catalytic domain NG829_12825 PF09190 DALR domain NG829_12830 PF02657 Fe-S metabolism associated domain NG829_12855 PF01258 Prokaryotic dksA/traR C4-type zinc finger NG829_12860 PF01809 Putative membrane protein insertion efficiency factor NG829_12865 PF01979 Amidohydrolase family NG829_12870 PF08460 Bacterial SH3 domain NG829_12870 PF01551 Peptidase family M23 NG829_12880 PF00990 Diguanylate cyclase, GGDEF domain NG829_12880 PF07694 5TMR of 5TMR-LYT NG829_12885 PF01095 Pectinesterase NG829_12895 PF13419 Haloacid dehalogenase-like hydrolase NG829_12905 PF01979 Amidohydrolase family NG829_12910 PF06736 Protein of unknown function (DUF1211) NG829_12915 PF01132 Elongation factor P (EF-P) OB domain NG829_12915 PF08207 Elongation factor P (EF-P) KOW-like domain NG829_12915 PF09285 Elongation factor P, C-terminal NG829_12920 PF04055 Radical SAM superfamily NG829_12925 PF00990 Diguanylate cyclase, GGDEF domain NG829_12925 PF00563 EAL domain NG829_12925 PF03707 Bacterial signalling protein N terminal repeat NG829_12935 PF00588 SpoU rRNA Methylase family NG829_12940 PF00459 Inositol monophosphatase family NG829_12945 PF00672 HAMP domain NG829_12945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG829_12945 PF02203 Tar ligand binding domain homologue NG829_12950 PF07549 SecD/SecF GG Motif NG829_12950 PF02355 Protein export membrane protein NG829_12955 PF02355 Protein export membrane protein NG829_12955 PF07549 SecD/SecF GG Motif NG829_12955 PF13721 SecD export protein N-terminal TM region NG829_12960 PF02699 Preprotein translocase subunit NG829_12965 PF01702 Queuine tRNA-ribosyltransferase NG829_12970 PF00664 ABC transporter transmembrane region NG829_12970 PF00005 ABC transporter NG829_12985 PF00144 Beta-lactamase NG829_12995 PF03812 2-keto-3-deoxygluconate permease NG829_13005 PF00990 Diguanylate cyclase, GGDEF domain NG829_13005 PF00072 Response regulator receiver domain NG829_13010 PF00849 RNA pseudouridylate synthase NG829_13010 PF01479 S4 domain NG829_13015 PF00271 Helicase conserved C-terminal domain NG829_13015 PF00270 DEAD/DEAH box helicase NG829_13015 PF03880 DbpA RNA binding domain NG829_13030 PF01494 FAD binding domain NG829_13055 PF02805 Metal binding domain of Ada NG829_13055 PF06029 AlkA N-terminal domain NG829_13055 PF00730 HhH-GPD superfamily base excision DNA repair protein NG829_13055 PF12833 Helix-turn-helix domain NG829_13060 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NG829_13060 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NG829_13070 PF00654 Voltage gated chloride channel NG829_13085 PF00593 TonB dependent receptor NG829_13085 PF07715 TonB-dependent Receptor Plug Domain NG829_13090 PF00893 Small Multidrug Resistance protein NG829_13100 PF01799 [2Fe-2S] binding domain NG829_13100 PF10518 TAT (twin-arginine translocation) pathway signal sequence NG829_13100 PF00111 2Fe-2S iron-sulfur cluster binding domain NG829_13105 PF03450 CO dehydrogenase flavoprotein C-terminal domain NG829_13105 PF00941 FAD binding domain in molybdopterin dehydrogenase NG829_13110 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NG829_13110 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NG829_13115 PF12804 MobA-like NTP transferase domain NG829_13120 PF13478 XdhC Rossmann domain NG829_13120 PF02625 XdhC and CoxI family NG829_13125 PF06224 Winged helix DNA-binding domain NG829_13135 PF01137 RNA 3'-terminal phosphate cyclase NG829_13135 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain NG829_13140 PF01139 tRNA-splicing ligase RtcB NG829_13150 PF06956 Regulator of RNA terminal phosphate cyclase NG829_13150 PF00158 Sigma-54 interaction domain NG829_13155 PF01475 Ferric uptake regulator family NG829_13160 PF00749 tRNA synthetases class I (E and Q), catalytic domain NG829_13180 PF06123 Inner membrane protein CreD NG829_13185 PF00512 His Kinase A (phospho-acceptor) domain NG829_13185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG829_13185 PF00672 HAMP domain NG829_13190 PF00486 Transcriptional regulatory protein, C terminal NG829_13190 PF00072 Response regulator receiver domain NG829_13195 PF00990 Diguanylate cyclase, GGDEF domain NG829_13200 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ NG829_13205 PF09234 Domain of unknown function (DUF1963) NG829_13215 PF00270 DEAD/DEAH box helicase NG829_13215 PF02559 CarD-like/TRCF domain NG829_13215 PF00271 Helicase conserved C-terminal domain NG829_13215 PF03461 TRCF domain NG829_13215 PF17757 UvrB interaction domain NG829_13225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG829_13225 PF02895 Signal transducing histidine kinase, homodimeric domain NG829_13225 PF01584 CheW-like domain NG829_13225 PF01627 Hpt domain NG829_13230 PF13426 PAS domain NG829_13230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG829_13230 PF00672 HAMP domain NG829_13235 PF17202 Single cache domain 3 NG829_13235 PF00672 HAMP domain NG829_13235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG829_13240 PF00672 HAMP domain NG829_13240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG829_13240 PF12729 Four helix bundle sensory module for signal transduction NG829_13245 PF01584 CheW-like domain NG829_13250 PF00563 EAL domain NG829_13250 PF00990 Diguanylate cyclase, GGDEF domain NG829_13250 PF03707 Bacterial signalling protein N terminal repeat NG829_13255 PF01739 CheR methyltransferase, SAM binding domain NG829_13255 PF03705 CheR methyltransferase, all-alpha domain NG829_13260 PF01339 CheB methylesterase NG829_13260 PF00072 Response regulator receiver domain NG829_13265 PF02311 AraC-like ligand binding domain NG829_13265 PF12833 Helix-turn-helix domain NG829_13275 PF07944 Beta-L-arabinofuranosidase, GH127 NG829_13280 PF01648 4'-phosphopantetheinyl transferase superfamily NG829_13280 PF17837 4'-phosphopantetheinyl transferase N-terminal domain NG829_13290 PF00300 Histidine phosphatase superfamily (branch 1) NG829_13295 PF04493 Endonuclease V NG829_13300 PF02678 Pirin NG829_13300 PF05726 Pirin C-terminal cupin domain NG829_13310 PF02678 Pirin NG829_13310 PF05726 Pirin C-terminal cupin domain NG829_13315 PF02554 Carbon starvation protein CstA NG829_13315 PF13722 5TM C-terminal transporter carbon starvation CstA NG829_13320 PF04328 Selenoprotein, putative NG829_13350 PF07676 WD40-like Beta Propeller Repeat NG829_13350 PF00326 Prolyl oligopeptidase family NG829_13350 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region NG829_13355 PF03169 OPT oligopeptide transporter protein NG829_13360 PF00854 POT family NG829_13370 PF00356 Bacterial regulatory proteins, lacI family NG829_13380 PF03825 Nucleoside H+ symporter NG829_13385 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NG829_13385 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NG829_13395 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NG829_13410 PF05199 GMC oxidoreductase NG829_13410 PF00732 GMC oxidoreductase NG829_13420 PF00436 Single-strand binding protein family NG829_13425 PF00348 Polyprenyl synthetase NG829_13440 PF08245 Mur ligase middle domain NG829_13455 PF01842 ACT domain NG829_13455 PF00696 Amino acid kinase family NG829_13465 PF02567 Phenazine biosynthesis-like protein NG829_13475 PF02566 OsmC-like protein NG829_13490 PF01476 LysM domain NG829_13490 PF01551 Peptidase family M23 NG829_13490 PF08525 Opacity-associated protein A N-terminal motif NG829_13505 PF01965 DJ-1/PfpI family NG829_13520 PF01458 Uncharacterized protein family (UPF0051) NG829_13525 PF00005 ABC transporter NG829_13530 PF01458 Uncharacterized protein family (UPF0051) NG829_13535 PF00266 Aminotransferase class-V NG829_13545 PF00355 Rieske [2Fe-2S] domain NG829_13555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG829_13555 PF00672 HAMP domain NG829_13555 PF02203 Tar ligand binding domain homologue NG829_13565 PF02927 Cellulase N-terminal ig-like domain NG829_13565 PF00759 Glycosyl hydrolase family 9 NG829_13570 PF02321 Outer membrane efflux protein NG829_13575 PF13533 Biotin-lipoyl like NG829_13580 PF00873 AcrB/AcrD/AcrF family NG829_13585 PF00486 Transcriptional regulatory protein, C terminal NG829_13585 PF00072 Response regulator receiver domain NG829_13590 PF00672 HAMP domain NG829_13590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG829_13590 PF00512 His Kinase A (phospho-acceptor) domain NG829_13595 PF00753 Metallo-beta-lactamase superfamily NG829_13605 PF00037 4Fe-4S binding domain NG829_13615 PF01467 Cytidylyltransferase-like NG829_13625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG829_13625 PF00183 Hsp90 protein NG829_13630 PF02615 Malate/L-lactate dehydrogenase NG829_13635 PF00593 TonB dependent receptor NG829_13635 PF07715 TonB-dependent Receptor Plug Domain NG829_13650 PF04616 Glycosyl hydrolases family 43 NG829_13655 PF07532 Bacterial Ig-like domain (group 4) NG829_13660 PF00593 TonB dependent receptor NG829_13660 PF07715 TonB-dependent Receptor Plug Domain NG829_13685 PF13520 Amino acid permease NG829_13700 PF01321 Creatinase/Prolidase N-terminal domain NG829_13700 PF00557 Metallopeptidase family M24 NG829_13705 PF00171 Aldehyde dehydrogenase family NG829_13710 PF00701 Dihydrodipicolinate synthetase family NG829_13715 PF07992 Pyridine nucleotide-disulphide oxidoreductase NG829_13715 PF17806 Sarcosine oxidase A3 domain NG829_13725 PF01266 FAD dependent oxidoreductase NG829_13730 PF05544 Proline racemase NG829_13740 PF02881 SRP54-type protein, helical bundle domain NG829_13740 PF00448 SRP54-type protein, GTPase domain NG829_13745 PF14815 NUDIX domain NG829_13745 PF00633 Helix-hairpin-helix motif NG829_13745 PF10576 Iron-sulfur binding domain of endonuclease III NG829_13745 PF00730 HhH-GPD superfamily base excision DNA repair protein NG829_13750 PF04362 Bacterial Fe(2+) trafficking NG829_13770 PF01612 3'-5' exonuclease NG829_13770 PF00570 HRDC domain NG829_13790 PF01584 CheW-like domain NG829_13795 PF17202 Single cache domain 3 NG829_13795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG829_13795 PF00672 HAMP domain NG829_13800 PF17202 Single cache domain 3 NG829_13800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG829_13800 PF00672 HAMP domain NG829_13805 PF00271 Helicase conserved C-terminal domain NG829_13805 PF08494 DEAD/H associated NG829_13805 PF00270 DEAD/DEAH box helicase NG829_13815 PF00563 EAL domain NG829_13815 PF03707 Bacterial signalling protein N terminal repeat NG829_13815 PF13188 PAS domain NG829_13815 PF00990 Diguanylate cyclase, GGDEF domain NG829_13820 PF00013 KH domain NG829_13820 PF01138 3' exoribonuclease family, domain 1 NG829_13820 PF00575 S1 RNA binding domain NG829_13820 PF03725 3' exoribonuclease family, domain 2 NG829_13820 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain NG829_13825 PF00312 Ribosomal protein S15 NG829_13830 PF01509 TruB family pseudouridylate synthase (N terminal domain) NG829_13830 PF16198 tRNA pseudouridylate synthase B C-terminal domain NG829_13830 PF09157 Pseudouridine synthase II TruB, C-terminal NG829_13835 PF02033 Ribosome-binding factor A NG829_13840 PF04760 Translation initiation factor IF-2, N-terminal region NG829_13840 PF00009 Elongation factor Tu GTP binding domain NG829_13840 PF11987 Translation-initiation factor 2 NG829_13840 PF08364 Bacterial translation initiation factor IF-2 associated region NG829_13845 PF13184 NusA-like KH domain NG829_13845 PF08529 NusA N-terminal domain NG829_13845 PF00575 S1 RNA binding domain NG829_13850 PF02576 RimP N-terminal domain NG829_13850 PF17384 RimP C-terminal SH3 domain NG829_13860 PF00361 Proton-conducting membrane transporter NG829_13865 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus NG829_13865 PF00361 Proton-conducting membrane transporter NG829_13870 PF00361 Proton-conducting membrane transporter NG829_13870 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NG829_13875 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NG829_13880 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 NG829_13885 PF12838 4Fe-4S dicluster domain NG829_13890 PF00146 NADH dehydrogenase NG829_13895 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal NG829_13895 PF00384 Molybdopterin oxidoreductase NG829_13895 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NG829_13900 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NG829_13900 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region NG829_13900 PF10531 SLBB domain NG829_13910 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NG829_13915 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit NG829_13920 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit NG829_13925 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 NG829_13940 PF00121 Triosephosphate isomerase NG829_13955 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NG829_13955 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NG829_13955 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NG829_13955 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NG829_13960 PF01039 Carboxyl transferase domain NG829_13960 PF17848 Acetyl-coA carboxylase zinc finger domain NG829_13965 PF00290 Tryptophan synthase alpha chain NG829_13970 PF00291 Pyridoxal-phosphate dependent enzyme NG829_13975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NG829_13975 PF03466 LysR substrate binding domain NG829_13980 PF05816 Toxic anion resistance protein (TelA) NG829_14005 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase NG829_14010 PF01416 tRNA pseudouridine synthase NG829_14020 PF01118 Semialdehyde dehydrogenase, NAD binding domain NG829_14020 PF02774 Semialdehyde dehydrogenase, dimerisation domain NG829_14025 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NG829_14025 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NG829_14030 PF01264 Chorismate synthase NG829_14035 PF05175 Methyltransferase small domain NG829_14040 PF02630 SCO1/SenC NG829_14045 PF02666 Phosphatidylserine decarboxylase NG829_14050 PF06737 Transglycosylase-like domain NG829_14055 PF05872 Bacterial protein of unknown function (DUF853) NG829_14065 PF00293 NUDIX domain NG829_14080 PF01272 Transcription elongation factor, GreA/GreB, C-term NG829_14080 PF03449 Transcription elongation factor, N-terminal NG829_14085 PF04055 Radical SAM superfamily NG829_14085 PF18693 TRAM domain NG829_14085 PF00919 Uncharacterized protein family UPF0004 NG829_14090 PF01738 Dienelactone hydrolase family NG829_14105 PF06271 RDD family NG829_14110 PF00692 dUTPase NG829_14115 PF10609 NUBPL iron-transfer P-loop NTPase NG829_14120 PF07715 TonB-dependent Receptor Plug Domain NG829_14120 PF00593 TonB dependent receptor NG829_14130 PF13181 Tetratricopeptide repeat NG829_14140 PF00593 TonB dependent receptor NG829_14140 PF07715 TonB-dependent Receptor Plug Domain NG829_14155 PF01431 Peptidase family M13 NG829_14155 PF05649 Peptidase family M13 NG829_14180 PF07992 Pyridine nucleotide-disulphide oxidoreductase NG829_14180 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NG829_14185 PF04235 Protein of unknown function (DUF418) NG829_14190 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NG829_14195 PF00877 NlpC/P60 family NG829_14200 PF00877 NlpC/P60 family NG829_14205 PF01209 ubiE/COQ5 methyltransferase family NG829_14215 PF03061 Thioesterase superfamily NG829_14220 PF08241 Methyltransferase domain NG829_14225 PF00375 Sodium:dicarboxylate symporter family NG829_14230 PF00245 Alkaline phosphatase NG829_14240 PF11734 TilS substrate C-terminal domain NG829_14240 PF01171 PP-loop family NG829_14240 PF09179 TilS substrate binding domain NG829_14245 PF02609 Exonuclease VII small subunit NG829_14250 PF00348 Polyprenyl synthetase NG829_14255 PF14521 Lysine-specific metallo-endopeptidase NG829_14280 PF01523 Putative modulator of DNA gyrase NG829_14285 PF04751 Protein of unknown function (DUF615) NG829_14290 PF01523 Putative modulator of DNA gyrase NG829_14300 PF10150 Ribonuclease E/G family NG829_14300 PF00575 S1 RNA binding domain NG829_14305 PF02545 Maf-like protein NG829_14310 PF04402 Protein of unknown function (DUF541) NG829_14325 PF00593 TonB dependent receptor NG829_14325 PF07715 TonB-dependent Receptor Plug Domain NG829_14330 PF02590 Predicted SPOUT methyltransferase NG829_14345 PF01467 Cytidylyltransferase-like NG829_14360 PF08264 Anticodon-binding domain of tRNA NG829_14360 PF00133 tRNA synthetases class I (I, L, M and V) NG829_14360 PF13603 Leucyl-tRNA synthetase, Domain 2 NG829_14370 PF00085 Thioredoxin NG829_14380 PF01590 GAF domain NG829_14380 PF00990 Diguanylate cyclase, GGDEF domain NG829_14380 PF00360 Phytochrome region NG829_14380 PF00563 EAL domain NG829_14395 PF02592 Putative vitamin uptake transporter NG829_14405 PF02574 Homocysteine S-methyltransferase NG829_14415 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NG829_14425 PF09334 tRNA synthetases class I (M) NG829_14425 PF01588 Putative tRNA binding domain NG829_14435 PF04060 Putative Fe-S cluster NG829_14450 PF04545 Sigma-70, region 4 NG829_14450 PF04542 Sigma-70 region 2 NG829_14495 PF01042 Endoribonuclease L-PSP NG829_14505 PF03706 Lysylphosphatidylglycerol synthase TM region NG829_14540 PF07690 Major Facilitator Superfamily NG829_14545 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NG829_14550 PF03831 PhnA domain NG829_14550 PF08274 PhnA Zinc-Ribbon NG829_14560 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NG829_14565 PF00012 Hsp70 protein NG829_14595 PF01258 Prokaryotic dksA/traR C4-type zinc finger NG829_14605 PF01863 Protein of unknown function DUF45 NG829_14610 PF00849 RNA pseudouridylate synthase NG829_14610 PF01479 S4 domain NG829_14620 PF13360 PQQ-like domain NG829_14625 PF00593 TonB dependent receptor NG829_14625 PF07715 TonB-dependent Receptor Plug Domain NG829_14640 PF07043 Protein of unknown function (DUF1328) NG829_14680 PF02310 B12 binding domain NG829_14680 PF01642 Methylmalonyl-CoA mutase NG829_14690 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NG829_14690 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NG829_14695 PF00082 Subtilase family NG829_14695 PF03797 Autotransporter beta-domain NG829_14695 PF12951 Passenger-associated-transport-repeat NG829_14700 PF00108 Thiolase, N-terminal domain NG829_14700 PF02803 Thiolase, C-terminal domain NG829_14715 PF00990 Diguanylate cyclase, GGDEF domain NG829_14715 PF00072 Response regulator receiver domain NG829_14730 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NG829_14730 PF02770 Acyl-CoA dehydrogenase, middle domain NG829_14730 PF18158 Adaptive response protein AidB N-terminal domain NG829_14735 PF04679 ATP dependent DNA ligase C terminal region NG829_14735 PF01068 ATP dependent DNA ligase domain NG829_14735 PF04675 DNA ligase N terminus NG829_14740 PF04679 ATP dependent DNA ligase C terminal region NG829_14740 PF01068 ATP dependent DNA ligase domain NG829_14740 PF04675 DNA ligase N terminus NG829_14745 PF08494 DEAD/H associated NG829_14745 PF00271 Helicase conserved C-terminal domain NG829_14745 PF00270 DEAD/DEAH box helicase NG829_14755 PF01494 FAD binding domain NG829_14760 PF00313 'Cold-shock' DNA-binding domain NG829_14765 PF01048 Phosphorylase superfamily NG829_14770 PF00156 Phosphoribosyl transferase domain NG829_14775 PF00933 Glycosyl hydrolase family 3 N terminal domain NG829_14785 PF01928 CYTH domain NG829_14790 PF05958 tRNA (Uracil-5-)-methyltransferase NG829_14800 PF00593 TonB dependent receptor NG829_14800 PF07715 TonB-dependent Receptor Plug Domain NG829_14810 PF07650 KH domain NG829_14810 PF01926 50S ribosome-binding GTPase NG829_14815 PF00035 Double-stranded RNA binding motif NG829_14815 PF14622 Ribonuclease-III-like NG829_14825 PF10502 Signal peptidase, peptidase S26 NG829_14830 PF00679 Elongation factor G C-terminus NG829_14830 PF00009 Elongation factor Tu GTP binding domain NG829_14830 PF03144 Elongation factor Tu domain 2 NG829_14830 PF06421 GTP-binding protein LepA C-terminus NG829_14835 PF13180 PDZ domain NG829_14845 PF04542 Sigma-70 region 2 NG829_14845 PF08281 Sigma-70, region 4 NG829_14850 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NG829_14850 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NG829_14850 PF00378 Enoyl-CoA hydratase/isomerase NG829_14860 PF01545 Cation efflux family NG829_14870 PF03601 Conserved hypothetical protein 698 NG829_14875 PF03466 LysR substrate binding domain NG829_14875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NG829_14885 PF07745 Glycosyl hydrolase family 53 NG829_14890 PF16355 Domain of unknown function (DUF4982) NG829_14890 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 NG829_14890 PF00703 Glycosyl hydrolases family 2 NG829_14890 PF02836 Glycosyl hydrolases family 2, TIM barrel domain NG829_14890 PF02837 Glycosyl hydrolases family 2, sugar binding domain NG829_14900 PF00488 MutS domain V NG829_14900 PF05190 MutS family domain IV NG829_14900 PF05192 MutS domain III NG829_14900 PF05188 MutS domain II NG829_14900 PF01624 MutS domain I NG829_14905 PF13417 Glutathione S-transferase, N-terminal domain NG829_14915 PF00004 ATPase family associated with various cellular activities (AAA) NG829_14915 PF07724 AAA domain (Cdc48 subfamily) NG829_14915 PF17871 AAA lid domain NG829_14915 PF02861 Clp amino terminal domain, pathogenicity island component NG829_14915 PF10431 C-terminal, D2-small domain, of ClpB protein NG829_14920 PF00141 Peroxidase NG829_14925 PF01479 S4 domain NG829_14930 PF01554 MatE NG829_14935 PF01245 Ribosomal protein L19 NG829_14940 PF01746 tRNA (Guanine-1)-methyltransferase NG829_14945 PF01782 RimM N-terminal domain NG829_14945 PF05239 PRC-barrel domain NG829_14950 PF00886 Ribosomal protein S16 NG829_14960 PF03060 Nitronate monooxygenase NG829_14970 PF02978 Signal peptide binding domain NG829_14970 PF02881 SRP54-type protein, helical bundle domain NG829_14970 PF00448 SRP54-type protein, GTPase domain NG829_14975 PF01578 Cytochrome C assembly protein NG829_14985 PF06964 Alpha-L-arabinofuranosidase C-terminal domain NG829_14995 PF03764 Elongation factor G, domain IV NG829_14995 PF00009 Elongation factor Tu GTP binding domain NG829_14995 PF03144 Elongation factor Tu domain 2 NG829_14995 PF14492 Elongation Factor G, domain II NG829_14995 PF00679 Elongation factor G C-terminus NG829_15005 PF00999 Sodium/hydrogen exchanger family NG829_15015 PF00043 Glutathione S-transferase, C-terminal domain NG829_15015 PF13417 Glutathione S-transferase, N-terminal domain NG829_15020 PF02653 Branched-chain amino acid transport system / permease component NG829_15025 PF02653 Branched-chain amino acid transport system / permease component NG829_15030 PF00005 ABC transporter NG829_15035 PF13407 Periplasmic binding protein domain NG829_15040 PF00171 Aldehyde dehydrogenase family NG829_15050 PF03466 LysR substrate binding domain NG829_15050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NG829_15060 PF00920 Dehydratase family NG829_15065 PF08281 Sigma-70, region 4 NG829_15065 PF04542 Sigma-70 region 2 NG829_15080 PF00328 Histidine phosphatase superfamily (branch 2) NG829_15090 PF18073 Rubredoxin metal binding domain NG829_15095 PF02224 Cytidylate kinase NG829_15105 PF00574 Clp protease NG829_15110 PF12680 SnoaL-like domain NG829_15110 PF08281 Sigma-70, region 4 NG829_15110 PF04542 Sigma-70 region 2 NG829_15115 PF03626 Prokaryotic Cytochrome C oxidase subunit IV NG829_15120 PF00510 Cytochrome c oxidase subunit III NG829_15125 PF00115 Cytochrome C and Quinol oxidase polypeptide I NG829_15130 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NG829_15130 PF06481 COX Aromatic Rich Motif NG829_15150 PF02401 LytB protein NG829_15155 PF01252 Signal peptidase (SPase) II NG829_15160 PF00133 tRNA synthetases class I (I, L, M and V) NG829_15160 PF06827 Zinc finger found in FPG and IleRS NG829_15160 PF08264 Anticodon-binding domain of tRNA NG829_15165 PF06574 FAD synthetase NG829_15165 PF01687 Riboflavin kinase NG829_15170 PF03023 Lipid II flippase MurJ NG829_15175 PF01649 Ribosomal protein S20 NG829_15180 PF01018 GTP1/OBG NG829_15180 PF01926 50S ribosome-binding GTPase NG829_15185 PF01016 Ribosomal L27 protein NG829_15190 PF00829 Ribosomal prokaryotic L21 protein NG829_15195 PF00005 ABC transporter NG829_15195 PF17760 UvrA interaction domain NG829_15195 PF17755 UvrA DNA-binding domain NG829_15210 PF00378 Enoyl-CoA hydratase/isomerase NG829_15230 PF04377 Arginine-tRNA-protein transferase, C terminus NG829_15230 PF04376 Arginine-tRNA-protein transferase, N terminus NG829_15245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG829_15245 PF08447 PAS fold NG829_15265 PF01370 NAD dependent epimerase/dehydratase family NG829_15265 PF02222 ATP-grasp domain NG829_15270 PF00355 Rieske [2Fe-2S] domain NG829_15270 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NG829_15300 PF12146 Serine aminopeptidase, S33 NG829_15300 PF13026 Protein of unknown function (DUF3887) NG829_15310 PF01636 Phosphotransferase enzyme family NG829_15340 PF00196 Bacterial regulatory proteins, luxR family NG829_15340 PF00072 Response regulator receiver domain NG829_15345 PF07730 Histidine kinase NG829_15355 PF03775 Septum formation inhibitor MinC, C-terminal domain NG829_15355 PF05209 Septum formation inhibitor MinC, N-terminal domain NG829_15360 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NG829_15365 PF03776 Septum formation topological specificity factor MinE NG829_15375 PF13493 Domain of unknown function (DUF4118) NG829_15375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG829_15375 PF00512 His Kinase A (phospho-acceptor) domain NG829_15375 PF02702 Osmosensitive K+ channel His kinase sensor domain NG829_15380 PF00072 Response regulator receiver domain NG829_15380 PF00486 Transcriptional regulatory protein, C terminal NG829_15390 PF08019 Phosphoethanolamine transferase EptA/EptB NG829_15390 PF00884 Sulfatase NG829_15445 PF07690 Major Facilitator Superfamily NG829_15450 PF02347 Glycine cleavage system P-protein NG829_15455 PF18011 C-terminal domain found in long catalases NG829_15455 PF00199 Catalase NG829_15455 PF06628 Catalase-related immune-responsive NG829_15460 PF08240 Alcohol dehydrogenase GroES-like domain NG829_15460 PF13823 Alcohol dehydrogenase GroES-associated NG829_15460 PF00107 Zinc-binding dehydrogenase NG829_15495 PF01915 Glycosyl hydrolase family 3 C-terminal domain NG829_15495 PF00933 Glycosyl hydrolase family 3 N terminal domain NG829_15495 PF14310 Fibronectin type III-like domain NG829_15500 PF17755 UvrA DNA-binding domain NG829_15555 PF00990 Diguanylate cyclase, GGDEF domain NG829_15565 PF00709 Adenylosuccinate synthetase NG829_15575 PF01145 SPFH domain / Band 7 family NG829_15580 PF01145 SPFH domain / Band 7 family NG829_15580 PF12221 Bacterial membrane protein N terminal NG829_15585 PF00107 Zinc-binding dehydrogenase NG829_15585 PF08240 Alcohol dehydrogenase GroES-like domain NG829_15590 PF00072 Response regulator receiver domain NG829_15595 PF01556 DnaJ C terminal domain NG829_15595 PF00226 DnaJ domain NG829_15605 PF08534 Redoxin NG829_15615 PF06832 Penicillin-Binding Protein C-terminus Family NG829_15615 PF00905 Penicillin binding protein transpeptidase domain NG829_15615 PF00912 Transglycosylase NG829_15620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG829_15620 PF00512 His Kinase A (phospho-acceptor) domain NG829_15620 PF00989 PAS fold NG829_15625 PF02954 Bacterial regulatory protein, Fis family NG829_15625 PF00072 Response regulator receiver domain NG829_15625 PF00158 Sigma-54 interaction domain NG829_15635 PF00005 ABC transporter NG829_15635 PF02687 FtsX-like permease family NG829_15635 PF12704 MacB-like periplasmic core domain NG829_15660 PF17962 Bacterial macroglobulin domain 6 NG829_15660 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain NG829_15660 PF01835 MG2 domain NG829_15660 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain NG829_15660 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain NG829_15660 PF11974 Bacterial alpha-2-macroglobulin MG3 domain NG829_15660 PF07703 Alpha-2-macroglobulin bait region domain NG829_15660 PF00207 Alpha-2-macroglobulin family NG829_15670 PF07715 TonB-dependent Receptor Plug Domain NG829_15670 PF00593 TonB dependent receptor NG829_15680 PF04303 PrpF protein NG829_15690 PF00330 Aconitase family (aconitate hydratase) NG829_15690 PF00694 Aconitase C-terminal domain NG829_15695 PF00285 Citrate synthase, C-terminal domain NG829_15725 PF00717 Peptidase S24-like NG829_15725 PF01726 LexA DNA binding domain NG829_15740 PF07733 Bacterial DNA polymerase III alpha NTPase domain NG829_15740 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NG829_15740 PF14579 Helix-hairpin-helix motif NG829_15740 PF02811 PHP domain NG829_15740 PF01336 OB-fold nucleic acid binding domain NG829_15755 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system NG829_15775 PF09115 DNA polymerase III, delta subunit, C terminal NG829_15780 PF02223 Thymidylate kinase NG829_15785 PF02618 YceG-like family NG829_15790 PF00425 chorismate binding enzyme NG829_15790 PF04715 Anthranilate synthase component I, N terminal region NG829_15795 PF00109 Beta-ketoacyl synthase, N-terminal domain NG829_15795 PF02801 Beta-ketoacyl synthase, C-terminal domain NG829_15800 PF00550 Phosphopantetheine attachment site NG829_15810 PF00698 Acyl transferase domain NG829_15815 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NG829_15815 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NG829_15820 PF01783 Ribosomal L32p protein family NG829_15825 PF02620 Large ribosomal RNA subunit accumulation protein YceD NG829_15830 PF02545 Maf-like protein NG829_15850 PF07726 ATPase family associated with various cellular activities (AAA) NG829_15850 PF17863 AAA lid domain NG829_15860 PF11992 Domain of unknown function (DUF3488) NG829_15860 PF13559 Domain of unknown function (DUF4129) NG829_15860 PF01841 Transglutaminase-like superfamily NG829_15870 PF01230 HIT domain NG829_15875 PF02132 RecR protein NG829_15875 PF13662 Toprim domain NG829_15880 PF02575 YbaB/EbfC DNA-binding family NG829_15885 PF12170 DNA polymerase III tau subunit V interacting with alpha NG829_15885 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding NG829_15885 PF12169 DNA polymerase III subunits gamma and tau domain III NG829_15900 PF02391 MoaE protein NG829_15905 PF02597 ThiS family NG829_15910 PF01967 MoaC family NG829_15920 PF06463 Molybdenum Cofactor Synthesis C NG829_15920 PF04055 Radical SAM superfamily NG829_15925 PF12706 Beta-lactamase superfamily domain NG829_15935 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NG829_15960 PF00929 Exonuclease NG829_15965 PF00075 RNase H NG829_15975 PF16123 Hydroxyacylglutathione hydrolase C-terminus NG829_15975 PF00753 Metallo-beta-lactamase superfamily NG829_15985 PF13145 PPIC-type PPIASE domain NG829_16005 PF00216 Bacterial DNA-binding protein NG829_16010 PF05362 Lon protease (S16) C-terminal proteolytic domain NG829_16010 PF00004 ATPase family associated with various cellular activities (AAA) NG829_16010 PF02190 ATP-dependent protease La (LON) substrate-binding domain NG829_16015 PF07724 AAA domain (Cdc48 subfamily) NG829_16015 PF10431 C-terminal, D2-small domain, of ClpB protein NG829_16015 PF06689 ClpX C4-type zinc finger NG829_16020 PF00574 Clp protease NG829_16025 PF05698 Bacterial trigger factor protein (TF) C-terminus NG829_16025 PF05697 Bacterial trigger factor protein (TF) NG829_16060 PF18324 Hypothetical protein TT1725 NG829_16060 PF00180 Isocitrate/isopropylmalate dehydrogenase NG829_16070 PF00462 Glutaredoxin NG829_16075 PF01435 Peptidase family M48 NG829_16075 PF13181 Tetratricopeptide repeat NG829_16080 PF00072 Response regulator receiver domain NG829_16080 PF00486 Transcriptional regulatory protein, C terminal NG829_16085 PF00512 His Kinase A (phospho-acceptor) domain NG829_16085 PF00989 PAS fold NG829_16085 PF11808 Phosphate regulon sensor protein PhoR NG829_16085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG829_16090 PF13089 Polyphosphate kinase N-terminal domain NG829_16090 PF02503 Polyphosphate kinase middle domain NG829_16090 PF13090 Polyphosphate kinase C-terminal domain 2 NG829_16090 PF17941 Polyphosphate kinase C-terminal domain 1 NG829_16095 PF02541 Ppx/GppA phosphatase family NG829_16100 PF13439 Glycosyltransferase Family 4 NG829_16100 PF00534 Glycosyl transferases group 1 NG829_16105 PF01569 PAP2 superfamily NG829_16125 PF04305 Protein of unknown function (DUF455) NG829_16135 PF00156 Phosphoribosyl transferase domain NG829_16150 PF08245 Mur ligase middle domain NG829_16150 PF02875 Mur ligase family, glutamate ligase domain NG829_16155 PF00300 Histidine phosphatase superfamily (branch 1) NG829_16160 PF10459 Peptidase S46 NG829_16165 PF00107 Zinc-binding dehydrogenase NG829_16165 PF08240 Alcohol dehydrogenase GroES-like domain NG829_16175 PF00005 ABC transporter NG829_16175 PF12857 TOBE-like domain NG829_16180 PF00528 Binding-protein-dependent transport system inner membrane component NG829_16200 PF00155 Aminotransferase class I and II NG829_16210 PF00849 RNA pseudouridylate synthase NG829_16220 PF00691 OmpA family NG829_16220 PF05736 OprF membrane domain NG829_16225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NG829_16225 PF03466 LysR substrate binding domain NG829_16240 PF00248 Aldo/keto reductase family NG829_16245 PF00107 Zinc-binding dehydrogenase NG829_16245 PF08240 Alcohol dehydrogenase GroES-like domain NG829_16250 PF07992 Pyridine nucleotide-disulphide oxidoreductase NG829_16250 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NG829_16270 PF03009 Glycerophosphoryl diester phosphodiesterase family NG829_16290 PF02798 Glutathione S-transferase, N-terminal domain NG829_16290 PF00043 Glutathione S-transferase, C-terminal domain NG829_16295 PF13193 AMP-binding enzyme C-terminal domain NG829_16295 PF00501 AMP-binding enzyme NG829_16295 PF16177 Acetyl-coenzyme A synthetase N-terminus NG829_16310 PF02798 Glutathione S-transferase, N-terminal domain NG829_16310 PF00043 Glutathione S-transferase, C-terminal domain NG829_16320 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NG829_16320 PF00056 lactate/malate dehydrogenase, NAD binding domain NG829_16330 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NG829_16335 PF00679 Elongation factor G C-terminus NG829_16335 PF00009 Elongation factor Tu GTP binding domain NG829_16335 PF03144 Elongation factor Tu domain 2 NG829_16350 PF01474 Class-II DAHP synthetase family NG829_16365 PF02600 Disulfide bond formation protein DsbB NG829_16370 PF01196 Ribosomal protein L17 NG829_16375 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain NG829_16375 PF01000 RNA polymerase Rpb3/RpoA insert domain NG829_16375 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain NG829_16380 PF00163 Ribosomal protein S4/S9 N-terminal domain NG829_16380 PF01479 S4 domain NG829_16385 PF00411 Ribosomal protein S11 NG829_16390 PF00416 Ribosomal protein S13/S18 NG829_16395 PF00344 SecY translocase NG829_16400 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A NG829_16405 PF00327 Ribosomal protein L30p/L7e NG829_16410 PF00333 Ribosomal protein S5, N-terminal domain NG829_16410 PF03719 Ribosomal protein S5, C-terminal domain NG829_16415 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast NG829_16420 PF00347 Ribosomal protein L6 NG829_16425 PF00410 Ribosomal protein S8 NG829_16430 PF00253 Ribosomal protein S14p/S29e NG829_16435 PF00281 Ribosomal protein L5 NG829_16435 PF00673 ribosomal L5P family C-terminus NG829_16440 PF00467 KOW motif NG829_16440 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 NG829_16445 PF00238 Ribosomal protein L14p/L23e NG829_16450 PF00366 Ribosomal protein S17 NG829_16455 PF00831 Ribosomal L29 protein NG829_16460 PF00252 Ribosomal protein L16p/L10e NG829_16465 PF07650 KH domain NG829_16465 PF00189 Ribosomal protein S3, C-terminal domain NG829_16470 PF00237 Ribosomal protein L22p/L17e NG829_16475 PF00203 Ribosomal protein S19 NG829_16480 PF00181 Ribosomal Proteins L2, RNA binding domain NG829_16480 PF03947 Ribosomal Proteins L2, C-terminal domain NG829_16485 PF00276 Ribosomal protein L23 NG829_16490 PF00573 Ribosomal protein L4/L1 family NG829_16495 PF00297 Ribosomal protein L3 NG829_16500 PF00338 Ribosomal protein S10p/S20e NG829_16505 PF00009 Elongation factor Tu GTP binding domain NG829_16505 PF03144 Elongation factor Tu domain 2 NG829_16505 PF03143 Elongation factor Tu C-terminal domain NG829_16510 PF03764 Elongation factor G, domain IV NG829_16510 PF00009 Elongation factor Tu GTP binding domain NG829_16510 PF14492 Elongation Factor G, domain II NG829_16510 PF03144 Elongation factor Tu domain 2 NG829_16510 PF00679 Elongation factor G C-terminus NG829_16515 PF00177 Ribosomal protein S7p/S5e NG829_16520 PF00164 Ribosomal protein S12/S23 NG829_16525 PF05000 RNA polymerase Rpb1, domain 4 NG829_16525 PF04998 RNA polymerase Rpb1, domain 5 NG829_16525 PF04983 RNA polymerase Rpb1, domain 3 NG829_16525 PF04997 RNA polymerase Rpb1, domain 1 NG829_16525 PF00623 RNA polymerase Rpb1, domain 2 NG829_16530 PF04560 RNA polymerase Rpb2, domain 7 NG829_16530 PF10385 RNA polymerase beta subunit external 1 domain NG829_16530 PF00562 RNA polymerase Rpb2, domain 6 NG829_16530 PF04561 RNA polymerase Rpb2, domain 2 NG829_16530 PF04563 RNA polymerase beta subunit NG829_16530 PF04565 RNA polymerase Rpb2, domain 3 NG829_16535 PF00542 Ribosomal protein L7/L12 C-terminal domain NG829_16535 PF16320 Ribosomal protein L7/L12 dimerisation domain NG829_16540 PF00466 Ribosomal protein L10 NG829_16545 PF00687 Ribosomal protein L1p/L10e family NG829_16550 PF00298 Ribosomal protein L11, RNA binding domain NG829_16550 PF03946 Ribosomal protein L11, N-terminal domain NG829_16555 PF00467 KOW motif NG829_16555 PF02357 Transcription termination factor nusG NG829_16560 PF00584 SecE/Sec61-gamma subunits of protein translocation complex NG829_16570 PF00009 Elongation factor Tu GTP binding domain NG829_16570 PF03143 Elongation factor Tu C-terminal domain NG829_16570 PF03144 Elongation factor Tu domain 2 NG829_16590 PF01926 50S ribosome-binding GTPase NG829_16590 PF06071 Protein of unknown function (DUF933) NG829_16595 PF01195 Peptidyl-tRNA hydrolase NG829_16600 PF01386 Ribosomal L25p family NG829_16600 PF14693 Ribosomal protein TL5, C-terminal domain NG829_16605 PF14572 Phosphoribosyl synthetase-associated domain NG829_16605 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NG829_16615 PF00288 GHMP kinases N terminal domain NG829_16615 PF08544 GHMP kinases C terminal NG829_16620 PF03550 Outer membrane lipoprotein LolB NG829_16630 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain NG829_16630 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain NG829_16630 PF01488 Shikimate / quinate 5-dehydrogenase NG829_16635 PF03462 PCRF domain NG829_16635 PF00472 RF-1 domain NG829_16655 PF00994 Probable molybdopterin binding domain NG829_16665 PF03976 Polyphosphate kinase 2 (PPK2) NG829_16670 PF08534 Redoxin NG829_16675 PF03631 Virulence factor BrkB NG829_16680 PF03358 NADPH-dependent FMN reductase NG829_16695 PF04073 Aminoacyl-tRNA editing domain NG829_16700 PF00082 Subtilase family NG829_16700 PF04151 Bacterial pre-peptidase C-terminal domain NG829_16710 PF01063 Amino-transferase class IV NG829_16725 PF02233 NAD(P) transhydrogenase beta subunit NG829_16730 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch NG829_16750 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NG829_16750 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NG829_16770 PF01612 3'-5' exonuclease NG829_16770 PF00476 DNA polymerase family A NG829_16770 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NG829_16770 PF01367 5'-3' exonuclease, C-terminal SAM fold NG829_16775 PF00293 NUDIX domain NG829_16795 PF00561 alpha/beta hydrolase fold NG829_16820 PF17827 PrmC N-terminal domain NG829_16820 PF05175 Methyltransferase small domain NG829_16825 PF00578 AhpC/TSA family NG829_16825 PF10417 C-terminal domain of 1-Cys peroxiredoxin NG829_16830 PF07992 Pyridine nucleotide-disulphide oxidoreductase NG829_16830 PF13192 Thioredoxin domain NG829_16835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NG829_16835 PF03466 LysR substrate binding domain NG829_16840 PF01272 Transcription elongation factor, GreA/GreB, C-term NG829_16840 PF14760 Rnk N-terminus NG829_16845 PF00923 Transaldolase/Fructose-6-phosphate aldolase NG829_16875 PF01625 Peptide methionine sulfoxide reductase NG829_16885 PF00072 Response regulator receiver domain NG829_16885 PF00196 Bacterial regulatory proteins, luxR family NG829_16890 PF00072 Response regulator receiver domain NG829_16890 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NG829_16890 PF01627 Hpt domain NG829_16890 PF00512 His Kinase A (phospho-acceptor) domain NG829_16890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG829_16890 PF00672 HAMP domain NG829_16895 PF00990 Diguanylate cyclase, GGDEF domain NG829_16895 PF00072 Response regulator receiver domain NG829_16905 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain NG829_16905 PF00749 tRNA synthetases class I (E and Q), catalytic domain NG829_16915 PF00892 EamA-like transporter family NG829_16935 PF18125 RlmM ferredoxin-like domain NG829_16935 PF01728 FtsJ-like methyltransferase NG829_16940 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NG829_16940 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NG829_16970 PF01494 FAD binding domain NG829_16975 PF01494 FAD binding domain NG829_16985 PF01923 Cobalamin adenosyltransferase NG829_16990 PF00850 Histone deacetylase domain NG829_16995 PF03968 OstA-like protein NG829_16995 PF04453 LPS transport system D NG829_17000 PF09312 SurA N-terminal domain NG829_17000 PF00639 PPIC-type PPIASE domain NG829_17005 PF04166 Pyridoxal phosphate biosynthetic protein PdxA NG829_17010 PF00398 Ribosomal RNA adenine dimethylase NG829_17015 PF04379 ApaG domain NG829_17020 PF00149 Calcineurin-like phosphoesterase NG829_17030 PF00186 Dihydrofolate reductase NG829_17035 PF00303 Thymidylate synthase NG829_17040 PF01790 Prolipoprotein diacylglyceryl transferase NG829_17055 PF04011 LemA family NG829_17060 PF03741 Integral membrane protein TerC family NG829_17065 PF01219 Prokaryotic diacylglycerol kinase NG829_17075 PF08521 Two-component sensor kinase N-terminal NG829_17075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG829_17075 PF00512 His Kinase A (phospho-acceptor) domain NG829_17080 PF00486 Transcriptional regulatory protein, C terminal NG829_17080 PF00072 Response regulator receiver domain NG829_17085 PF13472 GDSL-like Lipase/Acylhydrolase family NG829_17090 PF00005 ABC transporter NG829_17110 PF07715 TonB-dependent Receptor Plug Domain NG829_17110 PF00593 TonB dependent receptor NG829_17120 PF00248 Aldo/keto reductase family NG829_17125 PF01773 Na+ dependent nucleoside transporter N-terminus NG829_17125 PF07662 Na+ dependent nucleoside transporter C-terminus NG829_17125 PF07670 Nucleoside recognition NG829_17130 PF00294 pfkB family carbohydrate kinase NG829_17130 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) NG829_17140 PF01207 Dihydrouridine synthase (Dus) NG829_17145 PF13847 Methyltransferase domain NG829_17195 PF00438 S-adenosylmethionine synthetase, N-terminal domain NG829_17195 PF02773 S-adenosylmethionine synthetase, C-terminal domain NG829_17195 PF02772 S-adenosylmethionine synthetase, central domain NG829_17235 PF00311 Phosphoenolpyruvate carboxylase NG829_17245 PF05221 S-adenosyl-L-homocysteine hydrolase NG829_17245 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NG829_17270 PF00685 Sulfotransferase domain NG829_17285 PF00672 HAMP domain NG829_17285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG829_17305 PF00128 Alpha amylase, catalytic domain NG829_17310 PF02219 Methylenetetrahydrofolate reductase NG829_17320 PF00293 NUDIX domain NG829_17330 PF02810 SEC-C motif NG829_17330 PF07517 SecA DEAD-like domain NG829_17330 PF01043 SecA preprotein cross-linking domain NG829_17330 PF07516 SecA Wing and Scaffold domain NG829_17335 PF01476 LysM domain NG829_17335 PF01551 Peptidase family M23 NG829_17335 PF08525 Opacity-associated protein A N-terminal motif NG829_17345 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase NG829_17350 PF12327 FtsZ family, C-terminal domain NG829_17350 PF00091 Tubulin/FtsZ family, GTPase domain NG829_17355 PF02491 SHS2 domain inserted in FTSA NG829_17360 PF03799 Cell division protein FtsQ NG829_17360 PF08478 POTRA domain, FtsQ-type NG829_17365 PF07478 D-ala D-ala ligase C-terminus NG829_17365 PF01820 D-ala D-ala ligase N-terminus NG829_17370 PF01225 Mur ligase family, catalytic domain NG829_17370 PF02875 Mur ligase family, glutamate ligase domain NG829_17370 PF08245 Mur ligase middle domain NG829_17375 PF04101 Glycosyltransferase family 28 C-terminal domain NG829_17375 PF03033 Glycosyltransferase family 28 N-terminal domain NG829_17380 PF01098 Cell cycle protein NG829_17385 PF00953 Glycosyl transferase family 4 NG829_17390 PF02875 Mur ligase family, glutamate ligase domain NG829_17390 PF08245 Mur ligase middle domain NG829_17390 PF01225 Mur ligase family, catalytic domain NG829_17395 PF02875 Mur ligase family, glutamate ligase domain NG829_17395 PF08245 Mur ligase middle domain NG829_17395 PF01225 Mur ligase family, catalytic domain NG829_17400 PF03717 Penicillin-binding Protein dimerisation domain NG829_17400 PF00905 Penicillin binding protein transpeptidase domain NG829_17405 PF04999 Cell division protein FtsL NG829_17410 PF01795 MraW methylase family NG829_17415 PF02381 MraZ protein, putative antitoxin-like NG829_17435 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NG829_17445 PF02021 Uncharacterised protein family UPF0102 NG829_17450 PF04307 LexA-binding, inner membrane-associated putative hydrolase NG829_17455 PF02913 FAD linked oxidases, C-terminal domain NG829_17455 PF01565 FAD binding domain NG829_17460 PF00486 Transcriptional regulatory protein, C terminal NG829_17460 PF00072 Response regulator receiver domain NG829_17465 PF13492 GAF domain NG829_17465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG829_17465 PF00512 His Kinase A (phospho-acceptor) domain NG829_17465 PF02702 Osmosensitive K+ channel His kinase sensor domain NG829_17465 PF13493 Domain of unknown function (DUF4118) NG829_17470 PF02669 K+-transporting ATPase, c chain NG829_17480 PF03814 Potassium-transporting ATPase A subunit NG829_17500 PF00586 AIR synthase related protein, N-terminal domain NG829_17500 PF02769 AIR synthase related protein, C-terminal domain NG829_17505 PF01029 NusB family NG829_17510 PF00885 6,7-dimethyl-8-ribityllumazine synthase NG829_17515 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NG829_17515 PF00925 GTP cyclohydrolase II NG829_17520 PF00677 Lumazine binding domain NG829_17525 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NG829_17525 PF01872 RibD C-terminal domain NG829_17535 PF03477 ATP cone domain NG829_17540 PF00464 Serine hydroxymethyltransferase NG829_17555 PF07690 Major Facilitator Superfamily NG829_17560 PF00005 ABC transporter NG829_17560 PF12848 ABC transporter NG829_17565 PF01327 Polypeptide deformylase NG829_17570 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) NG829_17575 PF01270 Glycosyl hydrolases family 8 NG829_17580 PF03170 Bacterial cellulose synthase subunit NG829_17585 PF03552 Cellulose synthase NG829_17585 PF00535 Glycosyl transferase family 2 NG829_17585 PF07238 PilZ domain NG829_17600 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family NG829_17600 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain NG829_17645 PF00392 Bacterial regulatory proteins, gntR family NG829_17645 PF07702 UTRA domain NG829_17655 PF00263 Bacterial type II and III secretion system protein NG829_17655 PF03958 Bacterial type II/III secretion system short domain NG829_17665 PF10741 Type II secretion system (T2SS), protein M subtype b NG829_17670 PF05137 Fimbrial assembly protein (PilN) NG829_17675 PF03934 Type II secretion system (T2SS), protein K NG829_17685 PF07963 Prokaryotic N-terminal methylation motif NG829_17690 PF12019 Type II transport protein GspH NG829_17695 PF08334 Type II secretion system (T2SS), protein G NG829_17700 PF00482 Type II secretion system (T2SS), protein F NG829_17705 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NG829_17705 PF00437 Type II/IV secretion system protein NG829_17710 PF04151 Bacterial pre-peptidase C-terminal domain NG829_17710 PF00082 Subtilase family NG829_17715 PF13018 Extended Signal Peptide of Type V secretion system NG829_17715 PF05658 Head domain of trimeric autotransporter adhesin NG829_17715 PF05662 Coiled stalk of trimeric autotransporter adhesin NG829_17715 PF03895 YadA-like membrane anchor domain NG829_17720 PF02769 AIR synthase related protein, C-terminal domain NG829_17720 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain NG829_17720 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal NG829_17725 PF10411 Disulfide bond isomerase protein N-terminus NG829_17725 PF13098 Thioredoxin-like domain NG829_17735 PF02899 Phage integrase, N-terminal SAM-like domain NG829_17735 PF00589 Phage integrase family NG829_17760 PF00883 Cytosol aminopeptidase family, catalytic domain NG829_17760 PF02789 Cytosol aminopeptidase family, N-terminal domain NG829_17765 PF04364 DNA polymerase III chi subunit, HolC NG829_17770 PF08264 Anticodon-binding domain of tRNA NG829_17770 PF00133 tRNA synthetases class I (I, L, M and V) NG829_17770 PF10458 Valyl tRNA synthetase tRNA binding arm NG829_17775 PF00544 Pectate lyase NG829_17790 PF01066 CDP-alcohol phosphatidyltransferase NG829_17800 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NG829_17800 PF04073 Aminoacyl-tRNA editing domain NG829_17800 PF03129 Anticodon binding domain NG829_17805 PF00816 H-NS histone family NG829_17815 PF02405 Permease MlaE NG829_17820 PF00005 ABC transporter NG829_17825 PF02470 MlaD protein NG829_17825 PF03886 ABC-type transport auxiliary lipoprotein component NG829_17845 PF14307 Glycosyltransferase WbsX NG829_17845 PF05045 Rhamnan synthesis protein F NG829_17850 PF01144 Coenzyme A transferase NG829_17855 PF01144 Coenzyme A transferase NG829_17860 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NG829_17860 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NG829_17860 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NG829_17860 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NG829_17865 PF00483 Nucleotidyl transferase NG829_17865 PF01050 Mannose-6-phosphate isomerase NG829_17870 PF04321 RmlD substrate binding domain NG829_17875 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase NG829_17880 PF00483 Nucleotidyl transferase NG829_17885 PF16363 GDP-mannose 4,6 dehydratase NG829_17895 PF16363 GDP-mannose 4,6 dehydratase NG829_17900 PF01012 Electron transfer flavoprotein domain NG829_17905 PF01012 Electron transfer flavoprotein domain NG829_17905 PF00766 Electron transfer flavoprotein FAD-binding domain NG829_17910 PF16363 GDP-mannose 4,6 dehydratase NG829_17920 PF00535 Glycosyl transferase family 2 NG829_17935 PF01370 NAD dependent epimerase/dehydratase family NG829_17940 PF08241 Methyltransferase domain NG829_17945 PF00005 ABC transporter NG829_17955 PF01053 Cys/Met metabolism PLP-dependent enzyme NG829_17960 PF00291 Pyridoxal-phosphate dependent enzyme NG829_17960 PF00571 CBS domain NG829_17980 PF00437 Type II/IV secretion system protein NG829_17985 PF14497 Glutathione S-transferase, C-terminal domain NG829_17985 PF02798 Glutathione S-transferase, N-terminal domain NG829_17995 PF00271 Helicase conserved C-terminal domain NG829_17995 PF00270 DEAD/DEAH box helicase NG829_18000 PF01242 6-pyruvoyl tetrahydropterin synthase NG829_18015 PF13185 GAF domain NG829_18025 PF07715 TonB-dependent Receptor Plug Domain NG829_18025 PF00593 TonB dependent receptor NG829_18030 PF13419 Haloacid dehalogenase-like hydrolase NG829_18035 PF11798 IMS family HHH motif NG829_18035 PF00817 impB/mucB/samB family NG829_18035 PF11799 impB/mucB/samB family C-terminal domain NG829_18040 PF07977 FabA-like domain NG829_18045 PF00109 Beta-ketoacyl synthase, N-terminal domain NG829_18045 PF02801 Beta-ketoacyl synthase, C-terminal domain NG829_18055 PF01432 Peptidase family M3 NG829_18060 PF00291 Pyridoxal-phosphate dependent enzyme NG829_18070 PF00403 Heavy-metal-associated domain NG829_18075 PF09278 MerR, DNA binding NG829_18075 PF00376 MerR family regulatory protein NG829_18085 PF00394 Multicopper oxidase NG829_18085 PF07731 Multicopper oxidase NG829_18085 PF07732 Multicopper oxidase NG829_18090 PF05275 Copper resistance protein B precursor (CopB) NG829_18105 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NG829_18115 PF01380 SIS domain NG829_18120 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NG829_18125 PF00005 ABC transporter NG829_18130 PF12704 MacB-like periplasmic core domain NG829_18130 PF02687 FtsX-like permease family NG829_18130 PF00005 ABC transporter NG829_18135 PF02687 FtsX-like permease family NG829_18135 PF12704 MacB-like periplasmic core domain NG829_18140 PF02687 FtsX-like permease family NG829_18140 PF12704 MacB-like periplasmic core domain NG829_18145 PF12704 MacB-like periplasmic core domain NG829_18145 PF00005 ABC transporter NG829_18145 PF02687 FtsX-like permease family NG829_18150 PF12704 MacB-like periplasmic core domain NG829_18150 PF02687 FtsX-like permease family NG829_18150 PF00005 ABC transporter NG829_18155 PF00005 ABC transporter NG829_18155 PF02687 FtsX-like permease family NG829_18155 PF12704 MacB-like periplasmic core domain NG829_18160 PF12704 MacB-like periplasmic core domain NG829_18160 PF02687 FtsX-like permease family NG829_18165 PF00005 ABC transporter NG829_18165 PF02687 FtsX-like permease family NG829_18165 PF12704 MacB-like periplasmic core domain NG829_18170 PF00005 ABC transporter NG829_18170 PF02687 FtsX-like permease family NG829_18170 PF12704 MacB-like periplasmic core domain NG829_18180 PF12704 MacB-like periplasmic core domain NG829_18180 PF02687 FtsX-like permease family NG829_18185 PF00158 Sigma-54 interaction domain NG829_18185 PF02954 Bacterial regulatory protein, Fis family NG829_18185 PF00072 Response regulator receiver domain NG829_18190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG829_18190 PF00512 His Kinase A (phospho-acceptor) domain NG829_18190 PF00989 PAS fold NG829_18200 PF00132 Bacterial transferase hexapeptide (six repeats) NG829_18200 PF14602 Hexapeptide repeat of succinyl-transferase NG829_18200 PF12804 MobA-like NTP transferase domain NG829_18215 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain NG829_18215 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain NG829_18220 PF02874 ATP synthase alpha/beta family, beta-barrel domain NG829_18220 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NG829_18225 PF00231 ATP synthase NG829_18230 PF02874 ATP synthase alpha/beta family, beta-barrel domain NG829_18230 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NG829_18230 PF00306 ATP synthase alpha/beta chain, C terminal domain NG829_18235 PF00213 ATP synthase delta (OSCP) subunit NG829_18240 PF00430 ATP synthase B/B' CF(0) NG829_18245 PF00137 ATP synthase subunit C NG829_18250 PF00119 ATP synthase A chain NG829_18270 PF07992 Pyridine nucleotide-disulphide oxidoreductase NG829_18270 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NG829_18275 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NG829_18275 PF00364 Biotin-requiring enzyme NG829_18275 PF02817 e3 binding domain NG829_18300 PF03180 NLPA lipoprotein NG829_18305 PF00528 Binding-protein-dependent transport system inner membrane component NG829_18310 PF00005 ABC transporter NG829_18310 PF09383 NIL domain NG829_18315 PF00892 EamA-like transporter family NG829_18320 PF04461 Protein of unknown function (DUF520) NG829_18325 PF01494 FAD binding domain NG829_18340 PF08240 Alcohol dehydrogenase GroES-like domain NG829_18340 PF00107 Zinc-binding dehydrogenase NG829_18345 PF00171 Aldehyde dehydrogenase family NG829_18350 PF07859 alpha/beta hydrolase fold NG829_18355 PF00106 short chain dehydrogenase NG829_18360 PF00970 Oxidoreductase FAD-binding domain NG829_18360 PF00175 Oxidoreductase NAD-binding domain NG829_18360 PF00111 2Fe-2S iron-sulfur cluster binding domain NG829_18365 PF00866 Ring hydroxylating beta subunit NG829_18370 PF00355 Rieske [2Fe-2S] domain NG829_18370 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NG829_18375 PF04444 Catechol dioxygenase N terminus NG829_18375 PF00775 Dioxygenase NG829_18380 PF02426 Muconolactone delta-isomerase NG829_18385 PF13378 Enolase C-terminal domain-like NG829_18385 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NG829_18390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NG829_18390 PF03466 LysR substrate binding domain NG829_18400 PF00849 RNA pseudouridylate synthase NG829_18400 PF01479 S4 domain NG829_18405 PF05175 Methyltransferase small domain NG829_18405 PF08468 Methyltransferase small domain N-terminal NG829_18415 PF07995 Glucose / Sorbosone dehydrogenase NG829_18425 PF00512 His Kinase A (phospho-acceptor) domain NG829_18425 PF01627 Hpt domain NG829_18425 PF00989 PAS fold NG829_18425 PF00072 Response regulator receiver domain NG829_18425 PF00497 Bacterial extracellular solute-binding proteins, family 3 NG829_18425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG829_18445 PF00842 Alanine racemase, C-terminal domain NG829_18445 PF01168 Alanine racemase, N-terminal domain NG829_18450 PF01266 FAD dependent oxidoreductase NG829_18455 PF01037 Lrp/AsnC ligand binding domain NG829_18470 PF01641 SelR domain NG829_18480 PF01618 MotA/TolQ/ExbB proton channel family NG829_18485 PF00691 OmpA family NG829_18485 PF13677 Membrane MotB of proton-channel complex MotA/MotB NG829_18510 PF01061 ABC-2 type transporter NG829_18515 PF00005 ABC transporter NG829_18525 PF01037 Lrp/AsnC ligand binding domain NG829_18530 PF00999 Sodium/hydrogen exchanger family NG829_18535 PF05711 Macrocin-O-methyltransferase (TylF) NG829_18545 PF02469 Fasciclin domain NG829_18550 PF03167 Uracil DNA glycosylase superfamily NG829_18560 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase NG829_18565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NG829_18565 PF03466 LysR substrate binding domain NG829_18570 PF03358 NADPH-dependent FMN reductase NG829_18575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NG829_18575 PF03466 LysR substrate binding domain NG829_18580 PF00248 Aldo/keto reductase family NG829_18585 PF02627 Carboxymuconolactone decarboxylase family NG829_18590 PF00248 Aldo/keto reductase family NG829_18605 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NG829_18605 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NG829_18610 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family NG829_18615 PF00753 Metallo-beta-lactamase superfamily NG829_18630 PF00990 Diguanylate cyclase, GGDEF domain NG829_18635 PF00355 Rieske [2Fe-2S] domain NG829_18640 PF00990 Diguanylate cyclase, GGDEF domain NG829_18640 PF03707 Bacterial signalling protein N terminal repeat NG829_18640 PF00563 EAL domain NG829_18655 PF00593 TonB dependent receptor NG829_18655 PF07715 TonB-dependent Receptor Plug Domain NG829_18665 PF04397 LytTr DNA-binding domain NG829_18665 PF00072 Response regulator receiver domain NG829_18670 PF06580 Histidine kinase NG829_18670 PF07694 5TMR of 5TMR-LYT NG829_18680 PF01220 Dehydroquinase class II NG829_18690 PF13520 Amino acid permease NG829_18710 PF00553 Cellulose binding domain NG829_18710 PF00150 Cellulase (glycosyl hydrolase family 5) NG829_18715 PF00150 Cellulase (glycosyl hydrolase family 5) NG829_18715 PF00553 Cellulose binding domain NG829_18720 PF05193 Peptidase M16 inactive domain NG829_18720 PF00675 Insulinase (Peptidase family M16) NG829_18740 PF01204 Trehalase NG829_18745 PF00497 Bacterial extracellular solute-binding proteins, family 3 NG829_18745 PF01464 Transglycosylase SLT domain NG829_18755 PF00497 Bacterial extracellular solute-binding proteins, family 3 NG829_18765 PF06719 AraC-type transcriptional regulator N-terminus NG829_18765 PF12833 Helix-turn-helix domain NG829_18775 PF01544 CorA-like Mg2+ transporter protein NG829_18780 PF00324 Amino acid permease NG829_18790 PF00892 EamA-like transporter family NG829_18810 PF03466 LysR substrate binding domain NG829_18810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NG829_18815 PF02525 Flavodoxin-like fold NG829_18820 PF07759 Protein of unknown function (DUF1615) NG829_18830 PF03176 MMPL family NG829_18830 PF12823 Domain of unknown function (DUF3817) NG829_18835 PF08533 Beta-galactosidase C-terminal domain NG829_18835 PF08532 Beta-galactosidase trimerisation domain NG829_18835 PF02449 Beta-galactosidase NG829_18840 PF17189 Glycosyl hydrolase family 30 beta sandwich domain NG829_18845 PF00561 alpha/beta hydrolase fold NG829_18850 PF07804 HipA-like C-terminal domain NG829_18955 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NG829_18975 PF00456 Transketolase, thiamine diphosphate binding domain NG829_18975 PF17831 Pyruvate dehydrogenase E1 component middle domain NG829_19005 PF04264 YceI-like domain NG829_19010 PF00881 Nitroreductase family NG829_19030 PF03009 Glycerophosphoryl diester phosphodiesterase family NG829_19045 PF08335 GlnD PII-uridylyltransferase NG829_19045 PF03710 Glutamate-ammonia ligase adenylyltransferase NG829_19050 PF08946 Osmosensory transporter coiled coil NG829_19050 PF00083 Sugar (and other) transporter NG829_19055 PF07690 Major Facilitator Superfamily NG829_19060 PF03466 LysR substrate binding domain NG829_19060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NG829_19070 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain NG829_19070 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain NG829_19075 PF02463 RecF/RecN/SMC N terminal domain NG829_19080 PF01541 GIY-YIG catalytic domain NG829_19085 PF00793 DAHP synthetase I family NG829_19090 PF07715 TonB-dependent Receptor Plug Domain NG829_19090 PF00593 TonB dependent receptor NG829_19095 PF00118 TCP-1/cpn60 chaperonin family NG829_19100 PF00166 Chaperonin 10 Kd subunit NG829_19105 PF04231 Endonuclease I NG829_19110 PF03091 CutA1 divalent ion tolerance protein NG829_19115 PF11412 Disulphide bond corrector protein DsbC NG829_19115 PF02683 Cytochrome C biogenesis protein transmembrane region NG829_19120 PF00578 AhpC/TSA family NG829_19130 PF00754 F5/8 type C domain NG829_19130 PF00963 Cohesin domain NG829_19130 PF02838 Glycosyl hydrolase family 20, domain 2 NG829_19130 PF00041 Fibronectin type III domain NG829_19130 PF07555 beta-N-acetylglucosaminidase NG829_19135 PF01220 Dehydroquinase class II NG829_19140 PF00364 Biotin-requiring enzyme NG829_19150 PF00289 Biotin carboxylase, N-terminal domain NG829_19150 PF02785 Biotin carboxylase C-terminal domain NG829_19150 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NG829_19185 PF02954 Bacterial regulatory protein, Fis family NG829_19215 PF00782 Dual specificity phosphatase, catalytic domain NG829_19220 PF12146 Serine aminopeptidase, S33 NG829_19220 PF12147 Putative methyltransferase NG829_19225 PF01066 CDP-alcohol phosphatidyltransferase NG829_19230 PF02142 MGS-like domain NG829_19230 PF01808 AICARFT/IMPCHase bienzyme NG829_19240 PF02844 Phosphoribosylglycinamide synthetase, N domain NG829_19240 PF02843 Phosphoribosylglycinamide synthetase, C domain NG829_19240 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NG829_19255 PF12805 FUSC-like inner membrane protein yccS NG829_19260 PF07690 Major Facilitator Superfamily NG829_19270 PF03466 LysR substrate binding domain NG829_19270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NG829_19310 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain NG829_19310 PF09297 NADH pyrophosphatase zinc ribbon domain NG829_19310 PF00293 NUDIX domain NG829_19315 PF01521 Iron-sulphur cluster biosynthesis NG829_19335 PF00072 Response regulator receiver domain NG829_19335 PF00990 Diguanylate cyclase, GGDEF domain NG829_19335 PF00563 EAL domain NG829_19340 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NG829_19340 PF00072 Response regulator receiver domain NG829_19340 PF00512 His Kinase A (phospho-acceptor) domain NG829_19340 PF00672 HAMP domain NG829_19340 PF01627 Hpt domain NG829_19340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG829_19345 PF00210 Ferritin-like domain NG829_19350 PF04324 BFD-like [2Fe-2S] binding domain NG829_19355 PF00293 NUDIX domain NG829_19370 PF00380 Ribosomal protein S9/S16 NG829_19375 PF00572 Ribosomal protein L13 NG829_19380 PF03232 Ubiquinone biosynthesis protein COQ7 NG829_19390 PF00893 Small Multidrug Resistance protein NG829_19395 PF02675 S-adenosylmethionine decarboxylase NG829_19400 PF00027 Cyclic nucleotide-binding domain NG829_19400 PF00325 Bacterial regulatory proteins, crp family NG829_19405 PF01925 Sulfite exporter TauE/SafE NG829_19410 PF03425 Carbohydrate binding domain (family 11) NG829_19410 PF00150 Cellulase (glycosyl hydrolase family 5) NG829_19410 PF00404 Dockerin type I domain NG829_19410 PF02156 Glycosyl hydrolase family 26 NG829_19420 PF00218 Indole-3-glycerol phosphate synthase NG829_19425 PF02885 Glycosyl transferase family, helical bundle domain NG829_19425 PF00591 Glycosyl transferase family, a/b domain NG829_19440 PF00117 Glutamine amidotransferase class-I NG829_19450 PF01212 Beta-eliminating lyase NG829_19455 PF04715 Anthranilate synthase component I, N terminal region NG829_19455 PF00425 chorismate binding enzyme NG829_19460 PF00781 Diacylglycerol kinase catalytic domain NG829_19470 PF00834 Ribulose-phosphate 3 epimerase family NG829_19475 PF00226 DnaJ domain NG829_19475 PF01556 DnaJ C terminal domain NG829_19475 PF00684 DnaJ central domain NG829_19480 PF01259 SAICAR synthetase NG829_19510 PF13244 Domain of unknown function (DUF4040) NG829_19510 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter NG829_19510 PF00361 Proton-conducting membrane transporter NG829_19510 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NG829_19515 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NG829_19520 PF00361 Proton-conducting membrane transporter NG829_19525 PF01899 Na+/H+ ion antiporter subunit NG829_19530 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) NG829_19535 PF03334 Na+/H+ antiporter subunit NG829_19540 PF01699 Sodium/calcium exchanger protein NG829_19545 PF00199 Catalase NG829_19600 PF01590 GAF domain NG829_19600 PF00563 EAL domain NG829_19600 PF00990 Diguanylate cyclase, GGDEF domain NG829_19600 PF00360 Phytochrome region NG829_19605 PF00239 Resolvase, N terminal domain NG829_19605 PF02796 Helix-turn-helix domain of resolvase NG829_19615 PF00990 Diguanylate cyclase, GGDEF domain NG829_19615 PF00072 Response regulator receiver domain NG829_19620 PF00072 Response regulator receiver domain NG829_19620 PF00196 Bacterial regulatory proteins, luxR family NG829_19625 PF07730 Histidine kinase NG829_19625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG829_19635 PF00005 ABC transporter NG829_19640 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NG829_19650 PF00005 ABC transporter NG829_19655 PF02687 FtsX-like permease family NG829_19655 PF12704 MacB-like periplasmic core domain NG829_19670 PF00892 EamA-like transporter family NG829_19675 PF00892 EamA-like transporter family NG829_19695 PF00753 Metallo-beta-lactamase superfamily NG829_19700 PF00579 tRNA synthetases class I (W and Y) NG829_19710 PF05532 CsbD-like NG829_19725 PF00491 Arginase family NG829_19745 PF03309 Type III pantothenate kinase NG829_19750 PF02237 Biotin protein ligase C terminal domain NG829_19750 PF03099 Biotin/lipoate A/B protein ligase family NG829_19750 PF08279 HTH domain NG829_19760 PF06167 Glucose-regulated metallo-peptidase M90 NG829_19775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG829_19780 PF00072 Response regulator receiver domain NG829_19780 PF00486 Transcriptional regulatory protein, C terminal NG829_19790 PF01207 Dihydrouridine synthase (Dus) NG829_19800 PF08267 Cobalamin-independent synthase, N-terminal domain NG829_19800 PF01717 Cobalamin-independent synthase, Catalytic domain NG829_19810 PF00551 Formyl transferase NG829_19820 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NG829_19820 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NG829_19825 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NG829_19830 PF02146 Sir2 family NG829_19835 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NG829_19840 PF07690 Major Facilitator Superfamily NG829_19845 PF03466 LysR substrate binding domain NG829_19845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NG829_19860 PF00268 Ribonucleotide reductase, small chain NG829_19865 PF03477 ATP cone domain NG829_19865 PF02867 Ribonucleotide reductase, barrel domain NG829_19865 PF00317 Ribonucleotide reductase, all-alpha domain NG829_19875 PF00486 Transcriptional regulatory protein, C terminal NG829_19875 PF00072 Response regulator receiver domain NG829_19880 PF00672 HAMP domain NG829_19880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG829_19880 PF00512 His Kinase A (phospho-acceptor) domain NG829_19890 PF02146 Sir2 family NG829_19895 PF02566 OsmC-like protein NG829_19900 PF01047 MarR family NG829_19910 PF03969 AFG1-like ATPase NG829_19925 PF02492 CobW/HypB/UreG, nucleotide-binding domain NG829_19925 PF07683 Cobalamin synthesis protein cobW C-terminal domain NG829_19955 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NG829_19955 PF02770 Acyl-CoA dehydrogenase, middle domain NG829_19955 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NG829_19960 PF01039 Carboxyl transferase domain NG829_19965 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NG829_19965 PF00289 Biotin carboxylase, N-terminal domain NG829_19965 PF02785 Biotin carboxylase C-terminal domain NG829_19965 PF00364 Biotin-requiring enzyme NG829_20000 PF00583 Acetyltransferase (GNAT) family NG829_20000 PF13380 CoA binding domain NG829_20000 PF13607 Succinyl-CoA ligase like flavodoxin domain NG829_20005 PF00999 Sodium/hydrogen exchanger family NG829_20005 PF02254 TrkA-N domain NG829_20010 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain NG829_20010 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain NG829_20015 PF00723 Glycosyl hydrolases family 15 NG829_20020 PF00072 Response regulator receiver domain NG829_20020 PF00486 Transcriptional regulatory protein, C terminal NG829_20025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG829_20025 PF00512 His Kinase A (phospho-acceptor) domain NG829_20030 PF13018 Extended Signal Peptide of Type V secretion system NG829_20030 PF03895 YadA-like membrane anchor domain NG829_20030 PF05658 Head domain of trimeric autotransporter adhesin NG829_20030 PF05662 Coiled stalk of trimeric autotransporter adhesin NG829_20035 PF00082 Subtilase family NG829_20035 PF04151 Bacterial pre-peptidase C-terminal domain NG829_20045 PF05166 YcgL domain NG829_20050 PF00109 Beta-ketoacyl synthase, N-terminal domain NG829_20050 PF02801 Beta-ketoacyl synthase, C-terminal domain NG829_20060 PF00535 Glycosyl transferase family 2 NG829_20070 PF07519 Tannase and feruloyl esterase NG829_20100 PF07977 FabA-like domain NG829_20115 PF00550 Phosphopantetheine attachment site NG829_20120 PF04820 Tryptophan halogenase NG829_20150 PF02322 Cytochrome bd terminal oxidase subunit II NG829_20155 PF01654 Cytochrome bd terminal oxidase subunit I NG829_20175 PF01218 Coproporphyrinogen III oxidase NG829_20185 PF01612 3'-5' exonuclease NG829_20185 PF00476 DNA polymerase family A NG829_20185 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NG829_20185 PF01367 5'-3' exonuclease, C-terminal SAM fold NG829_20195 PF00582 Universal stress protein family NG829_20200 PF12464 Maltose acetyltransferase NG829_20200 PF14602 Hexapeptide repeat of succinyl-transferase NG829_20215 PF03372 Endonuclease/Exonuclease/phosphatase family NG829_20220 PF13091 PLD-like domain NG829_20225 PF03706 Lysylphosphatidylglycerol synthase TM region NG829_20245 PF13361 UvrD-like helicase C-terminal domain NG829_20245 PF00580 UvrD/REP helicase N-terminal domain NG829_20250 PF03466 LysR substrate binding domain NG829_20250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NG829_20255 PF07690 Major Facilitator Superfamily NG829_20265 PF13396 Phospholipase_D-nuclease N-terminal NG829_20265 PF13091 PLD-like domain NG829_20270 PF00471 Ribosomal protein L33 NG829_20275 PF00830 Ribosomal L28 family NG829_20285 PF02321 Outer membrane efflux protein NG829_20290 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NG829_20290 PF00529 HlyD membrane-fusion protein of T1SS NG829_20295 PF00873 AcrB/AcrD/AcrF family NG829_20315 PF00535 Glycosyl transferase family 2 NG829_20320 PF01370 NAD dependent epimerase/dehydratase family NG829_20335 PF02195 ParB-like nuclease domain NG829_20335 PF17762 HTH domain found in ParB protein NG829_20340 PF13614 AAA domain NG829_20345 PF02527 rRNA small subunit methyltransferase G NG829_20355 PF01648 4'-phosphopantetheinyl transferase superfamily NG829_20360 PF04226 Transglycosylase associated protein NG829_20380 PF00639 PPIC-type PPIASE domain NG829_20380 PF09312 SurA N-terminal domain NG829_20390 PF00171 Aldehyde dehydrogenase family NG829_20395 PF13419 Haloacid dehalogenase-like hydrolase NG829_20400 PF14521 Lysine-specific metallo-endopeptidase NG829_20405 PF00474 Sodium:solute symporter family NG829_20420 PF00501 AMP-binding enzyme NG829_20420 PF16177 Acetyl-coenzyme A synthetase N-terminus NG829_20420 PF13193 AMP-binding enzyme C-terminal domain NG829_20425 PF00072 Response regulator receiver domain NG829_20425 PF00196 Bacterial regulatory proteins, luxR family NG829_20430 PF02659 Putative manganese efflux pump NG829_20445 PF00593 TonB dependent receptor NG829_20445 PF07715 TonB-dependent Receptor Plug Domain NG829_20450 PF13181 Tetratricopeptide repeat NG829_20455 PF00672 HAMP domain NG829_20455 PF01627 Hpt domain NG829_20455 PF00512 His Kinase A (phospho-acceptor) domain NG829_20455 PF00072 Response regulator receiver domain NG829_20455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG829_20460 PF00004 ATPase family associated with various cellular activities (AAA) NG829_20460 PF17862 AAA+ lid domain NG829_20460 PF01434 Peptidase family M41 NG829_20475 PF10459 Peptidase S46 NG829_20485 PF03527 RHS protein NG829_20485 PF05593 RHS Repeat NG829_20505 PF04357 TamB, inner membrane protein subunit of TAM complex NG829_20510 PF17243 POTRA domain TamA domain 1 NG829_20510 PF07244 Surface antigen variable number repeat NG829_20510 PF01103 Surface antigen NG829_20525 PF04337 Protein of unknown function, DUF480 NG829_20555 PF05594 Haemagluttinin repeat NG829_20555 PF15526 Novel toxin 21 NG829_20555 PF05860 haemagglutination activity domain NG829_20555 PF13332 Hemagglutinin repeat NG829_20555 PF13332 Hemagglutinin repeat NG829_20555 PF05860 haemagglutination activity domain NG829_20555 PF15526 Novel toxin 21 NG829_20555 PF04829 Pre-toxin domain with VENN motif NG829_20555 PF05594 Haemagluttinin repeat NG829_20555 PF13332 Hemagglutinin repeat NG829_20555 PF05860 haemagglutination activity domain NG829_20555 PF15526 Novel toxin 21 NG829_20555 PF04829 Pre-toxin domain with VENN motif NG829_20555 PF04829 Pre-toxin domain with VENN motif NG829_20555 PF05594 Haemagluttinin repeat NG829_20560 PF17287 POTRA domain NG829_20560 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB NG829_20560 PF08479 POTRA domain, ShlB-type NG829_20570 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) NG829_20575 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NG829_20580 PF04820 Tryptophan halogenase NG829_20590 PF00356 Bacterial regulatory proteins, lacI family NG829_20605 PF01553 Acyltransferase NG829_20650 PF04244 Deoxyribodipyrimidine photo-lyase-related protein NG829_20680 PF01171 PP-loop family NG829_20685 PF04381 Putative exonuclease, RdgC NG829_20695 PF00672 HAMP domain NG829_20695 PF02203 Tar ligand binding domain homologue NG829_20695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG829_20700 PF12146 Serine aminopeptidase, S33 NG829_20705 PF00762 Ferrochelatase NG829_20715 PF02416 mttA/Hcf106 family NG829_20720 PF02416 mttA/Hcf106 family NG829_20725 PF00902 Sec-independent protein translocase protein (TatC) NG829_20735 PF00117 Glutamine amidotransferase class-I NG829_20735 PF00958 GMP synthase C terminal domain NG829_20735 PF02540 NAD synthase NG829_20740 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NG829_20740 PF00437 Type II/IV secretion system protein NG829_20745 PF02091 Glycyl-tRNA synthetase alpha subunit NG829_20750 PF02092 Glycyl-tRNA synthetase beta subunit NG829_20750 PF05746 DALR anticodon binding domain NG829_20755 PF00580 UvrD/REP helicase N-terminal domain NG829_20755 PF13361 UvrD-like helicase C-terminal domain NG829_20760 PF00265 Thymidine kinase NG829_20770 PF04349 Periplasmic glucan biosynthesis protein, MdoG NG829_20775 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NG829_20775 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NG829_20775 PF06827 Zinc finger found in FPG and IleRS NG829_20780 PF03527 RHS protein NG829_20780 PF05593 RHS Repeat NG829_20815 PF00005 ABC transporter NG829_20820 PF01638 HxlR-like helix-turn-helix NG829_20830 PF00580 UvrD/REP helicase N-terminal domain NG829_20830 PF13361 UvrD-like helicase C-terminal domain NG829_20840 PF13175 AAA ATPase domain NG829_20845 PF01555 DNA methylase NG829_20860 PF10396 GTP-binding protein TrmE N-terminus NG829_20860 PF12631 MnmE helical domain NG829_20860 PF01926 50S ribosome-binding GTPase NG829_20865 PF03422 Carbohydrate binding module (family 6) NG829_20865 PF00457 Glycosyl hydrolases family 11 NG829_20865 PF01522 Polysaccharide deacetylase NG829_20870 PF02096 60Kd inner membrane protein NG829_20870 PF14849 YidC periplasmic domain NG829_20875 PF00825 Ribonuclease P NG829_20880 PF00468 Ribosomal protein L34