locus-tag	class	description
NG829_00010	COG0592	DNA-directed DNA polymerase activity
NG829_00015	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
NG829_00020	COG0187	DNA topoisomerase II activity
NG829_00025	COG1266	CAAX protease self-immunity
NG829_00030	COG0501	Belongs to the peptidase M48B family
NG829_00075	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
NG829_00095	COG0655	NAD(P)H dehydrogenase (quinone) activity
NG829_00120	COG4772	TonB-dependent receptor
NG829_00140	COG3284	Transcriptional regulator
NG829_00145	COG1012	belongs to the aldehyde dehydrogenase family
NG829_00180	COG1304	FMN binding
NG829_00185	COG2186	Transcriptional regulator
NG829_00200	COG4585	Histidine kinase
NG829_00205	COG2197	response regulator
NG829_00345	COG4771	TonB-dependent receptor
NG829_00355	COG1629	transport
NG829_00355	COG4774	siderophore transport
NG829_00385	COG2755	lipolytic protein G-D-S-L family
NG829_00385	COG0657	acetylesterase activity
NG829_00395	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
NG829_00410	COG1609	Transcriptional regulator
NG829_00420	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
NG829_00425	COG1028	Short-chain dehydrogenase reductase Sdr
NG829_00435	COG2755	lipolytic protein G-D-S-L family
NG829_00445	COG3186	Phenylalanine-4-hydroxylase
NG829_00450	COG1522	sequence-specific DNA binding
NG829_00470	COG1752	Esterase of the alpha-beta hydrolase superfamily
NG829_00480	COG0671	phosphoesterase, PA-phosphatase related
NG829_00490	COG0861	Integral membrane protein TerC family
NG829_00495	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
NG829_00500	COG1929	Belongs to the glycerate kinase type-1 family
NG829_00515	COG0531	amino acid
NG829_00520	COG4566	intracellular signal transduction
NG829_00525	COG4191	Histidine kinase
NG829_00530	COG1285	pathogenesis
NG829_00540	COG1322	Protein conserved in bacteria
NG829_00545	COG0386	Belongs to the glutathione peroxidase family
NG829_00560	COG2853	Lipoprotein
NG829_00575	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
NG829_00580	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
NG829_00585	COG1127	ABC transporter
NG829_00625	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
NG829_00630	COG1074	ATP-dependent DNA helicase activity
NG829_00640	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
NG829_00715	COG0840	transmembrane signaling receptor activity
NG829_00725	COG0477	Major facilitator Superfamily
NG829_00730	COG0302	gtp cyclohydrolase
NG829_00760	COG2951	lytic endotransglycosylase activity
NG829_00780	COG3135	benzoate transporter
NG829_00820	COG1803	Methylglyoxal synthase
NG829_00825	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
NG829_00830	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
NG829_00835	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
NG829_00845	COG0493	'glutamate synthase
NG829_00850	COG0067	glutamate synthase
NG829_00850	COG0069	glutamate synthase activity
NG829_00850	COG0070	glutamate synthase
NG829_00875	COG1028	Short-chain dehydrogenase reductase Sdr
NG829_00910	COG1205	dead DEAH box helicase
NG829_00910	COG1111	helicase
NG829_00925	COG1272	protein, Hemolysin III
NG829_00955	COG2814	Major facilitator Superfamily
NG829_01005	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
NG829_01010	COG1192	Involved in chromosome partitioning
NG829_01015	COG2062	phosphohistidine phosphatase, SixA
NG829_01025	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
NG829_01030	COG2050	protein possibly involved in aromatic compounds catabolism
NG829_01055	COG1968	undecaprenyl-diphosphatase activity
NG829_01060	COG0174	glutamine synthetase
NG829_01065	COG0347	Belongs to the P(II) protein family
NG829_01070	COG0004	ammonium transporteR
NG829_01075	COG3852	Histidine kinase
NG829_01080	COG2204	response regulator
NG829_01085	COG2032	superoxide dismutase activity
NG829_01090	COG2032	superoxide dismutase activity
NG829_01100	COG0183	Belongs to the thiolase family
NG829_01125	COG0456	acetyltransferase
NG829_01140	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
NG829_01145	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
NG829_01175	COG3226	Transcriptional regulator
NG829_01185	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
NG829_01195	COG0612	Peptidase, M16
NG829_01205	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
NG829_01215	COG0596	Alpha beta hydrolase
NG829_01225	COG0727	PFAM Uncharacterised protein family (UPF0153)
NG829_01230	COG0318	PFAM AMP-dependent synthetase and ligase
NG829_01235	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
NG829_01305	COG1595	DNA-templated transcription, initiation
NG829_01315	COG1446	asparaginase
NG829_01320	COG0339	signal peptide processing
NG829_01335	COG0681	Belongs to the peptidase S26 family
NG829_01350	COG0583	DNA-binding transcription factor activity
NG829_01355	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
NG829_01360	COG2224	Isocitrate lyase
NG829_01365	COG3706	GGDEF domain
NG829_01385	COG4297	protein containing double-stranded beta helix domain
NG829_01390	COG0659	secondary active sulfate transmembrane transporter activity
NG829_01420	COG1024	Enoyl-CoA hydratase
NG829_01425	COG1022	Amp-dependent synthetase and ligase
NG829_01435	COG2814	Major facilitator Superfamily
NG829_01495	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
NG829_01505	COG3485	protocatechuate 3,4-dioxygenase
NG829_01510	COG3485	protocatechuate 3,4-dioxygenase
NG829_01520	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
NG829_01525	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
NG829_01530	COG1414	Transcriptional regulator
NG829_01535	COG2130	NADP-dependent
NG829_01550	COG1187	pseudouridine synthase activity
NG829_01560	COG1643	Atp-dependent helicase
NG829_01565	COG0084	hydrolase, TatD family'
NG829_01660	COG0842	Transport permease protein
NG829_01665	COG1131	(ABC) transporter
NG829_01670	COG0543	2 iron, 2 sulfur cluster binding
NG829_01670	COG0633	Ferredoxin
NG829_01680	COG1476	TRANSCRIPTIONal
NG829_01690	COG4555	ABC transporter
NG829_01715	COG0625	glutathione transferase activity
NG829_01865	COG3511	phospholipase C
NG829_01875	COG0628	permease
NG829_01965	COG0754	glutathionylspermidine amidase activity
NG829_01990	COG0714	Associated with various cellular activities
NG829_02020	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
NG829_02025	COG3420	alginic acid biosynthetic process
NG829_02035	COG0710	3-dehydroquinate dehydratase activity
NG829_02050	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NG829_02055	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NG829_02070	COG0657	acetylesterase activity
NG829_02085	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
NG829_02095	COG3023	N-Acetylmuramoyl-L-alanine amidase
NG829_02105	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
NG829_02135	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
NG829_02140	COG1040	competence protein
NG829_02190	COG0606	chelatase, subunit chli
NG829_02195	COG2960	long-chain fatty acid transporting porin activity
NG829_02220	COG1166	arginine decarboxylase activity
NG829_02225	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
NG829_02225	COG2755	lipolytic protein G-D-S-L family
NG829_02230	COG0583	DNA-binding transcription factor activity
NG829_02265	COG4221	oxidoreductase activity
NG829_02280	COG2003	Belongs to the UPF0758 family
NG829_02285	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
NG829_02295	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
NG829_02305	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
NG829_02310	COG0708	Exodeoxyribonuclease III
NG829_02315	COG2211	Major facilitator Superfamily
NG829_02330	COG0739	heme binding
NG829_02335	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
NG829_02365	COG1064	alcohol dehydrogenase
NG829_02370	COG2234	aminopeptidase activity
NG829_02380	COG4942	peptidase
NG829_02385	COG0793	Belongs to the peptidase S41A family
NG829_02390	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
NG829_02420	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
NG829_02430	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
NG829_02465	COG0840	transmembrane signaling receptor activity
NG829_02485	COG0358	DNA primase activity
NG829_02490	COG1295	ribonuclease BN
NG829_02510	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
NG829_02515	COG0668	transmembrane transport
NG829_02520	COG2308	Evidence 4 Homologs of previously reported genes of
NG829_02535	COG4682	membrane
NG829_02540	COG2133	pyrroloquinoline quinone binding
NG829_02560	COG0531	amino acid
NG829_02600	COG1070	Carbohydrate kinase
NG829_02610	COG1472	Belongs to the glycosyl hydrolase 3 family
NG829_02620	COG3661	Belongs to the glycosyl hydrolase 67 family
NG829_02635	COG1472	Belongs to the glycosyl hydrolase 3 family
NG829_02650	COG4948	Mandelate Racemase Muconate Lactonizing
NG829_02660	COG4771	TonB-dependent receptor
NG829_02665	COG3023	N-Acetylmuramoyl-L-alanine amidase
NG829_02690	COG3409	Peptidoglycan-binding domain 1 protein
NG829_02690	COG3501	Rhs element vgr protein
NG829_02725	COG5383	Protein conserved in bacteria
NG829_02730	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
NG829_02735	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
NG829_02740	COG0628	permease
NG829_02765	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
NG829_02855	COG0708	Exodeoxyribonuclease III
NG829_02860	COG1418	mRNA catabolic process
NG829_02865	COG4807	Protein conserved in bacteria
NG829_02880	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
NG829_02915	COG1028	Short-chain dehydrogenase reductase Sdr
NG829_02920	COG0179	Fumarylacetoacetate (FAA) hydrolase
NG829_02925	COG4948	Mandelate Racemase Muconate Lactonizing
NG829_02930	COG3254	rhamnose metabolic process
NG829_02935	COG0738	Major facilitator superfamily
NG829_02940	COG1414	Transcriptional regulator
NG829_03005	COG0604	alcohol dehydrogenase
NG829_03010	COG1196	nuclear chromosome segregation
NG829_03010	COG3264	Mechanosensitive ion channel
NG829_03015	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
NG829_03035	COG2354	Protein conserved in bacteria
NG829_03065	COG1028	Short-chain dehydrogenase reductase Sdr
NG829_03075	COG0513	Belongs to the DEAD box helicase family
NG829_03115	COG3483	tryptophan 2,3-dioxygenase activity
NG829_03120	COG3104	oligopeptide transport
NG829_03140	COG2852	Protein conserved in bacteria
NG829_03170	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NG829_03175	COG1473	amidohydrolase
NG829_03185	COG1652	LysM domain
NG829_03200	COG1349	DNA-binding transcription factor activity
NG829_03210	COG1940	carbohydrate kinase activity
NG829_03215	COG2222	sugar isomerase
NG829_03220	COG1501	Belongs to the glycosyl hydrolase 31 family
NG829_03230	COG0673	inositol 2-dehydrogenase activity
NG829_03265	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
NG829_03270	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
NG829_03275	COG3118	belongs to the thioredoxin family
NG829_03285	COG2884	Cell division ATP-binding protein ftsE
NG829_03290	COG2177	Part of the ABC transporter FtsEX involved in
NG829_03295	COG2201	protein-glutamate methylesterase activity
NG829_03300	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
NG829_03305	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
NG829_03310	COG2860	membrane
NG829_03315	COG1252	NADH dehydrogenase
NG829_03325	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
NG829_03335	COG0534	Mate efflux family protein
NG829_03340	COG0616	signal peptide processing
NG829_03350	COG1028	Short-chain dehydrogenase reductase Sdr
NG829_03365	COG0009	L-threonylcarbamoyladenylate synthase
NG829_03370	COG1754	DNA topoisomerase type I activity
NG829_03370	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
NG829_03375	COG1714	RDD family
NG829_03390	COG0758	DNA mediated transformation
NG829_03395	COG1652	LysM domain
NG829_03400	COG0242	peptide deformylase activity
NG829_03410	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
NG829_03410	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
NG829_03415	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
NG829_03450	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
NG829_03465	COG1490	D-aminoacyl-tRNA deacylase activity
NG829_03470	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
NG829_03485	COG1609	Transcriptional regulator
NG829_03490	COG3537	Alpha-1,2-mannosidase
NG829_03495	COG0366	Alpha amylase catalytic
NG829_03500	COG0366	Alpha amylase catalytic
NG829_03605	COG4974	Belongs to the 'phage' integrase family
NG829_03645	COG1191	sigma factor activity
NG829_03670	COG1609	Transcriptional regulator
NG829_03690	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NG829_03695	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NG829_03705	COG5002	protein histidine kinase activity
NG829_03715	COG3038	cytochrome b561
NG829_03720	COG1309	transcriptional regulator
NG829_03750	COG2271	Major facilitator Superfamily
NG829_03780	COG3546	catalase activity
NG829_03785	COG3685	Protein conserved in bacteria
NG829_03790	COG3685	Protein conserved in bacteria
NG829_03795	COG1028	Short-chain dehydrogenase reductase Sdr
NG829_03805	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
NG829_03825	COG0028	Belongs to the TPP enzyme family
NG829_03860	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
NG829_03860	COG1648	precorrin-2 dehydrogenase activity
NG829_03890	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
NG829_03900	COG0297	glycogen (starch) synthase activity
NG829_03910	COG2204	response regulator
NG829_03920	COG1335	isochorismatase
NG829_03940	COG0181	hydroxymethylbilane synthase activity
NG829_03955	COG1733	regulation of RNA biosynthetic process
NG829_03970	COG1505	serine-type exopeptidase activity
NG829_03980	COG0436	Aminotransferase
NG829_03990	COG2832	Protein of unknown function (DUF454)
NG829_04000	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
NG829_04020	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
NG829_04025	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
NG829_04045	COG2226	methyltransferase
NG829_04055	COG0308	aminopeptidase N
NG829_04065	COG0508	dehydrogenase complex catalyzes the overall conversion of
NG829_04065	COG0596	Alpha beta hydrolase
NG829_04090	COG2010	Cytochrome c
NG829_04110	COG3284	Transcriptional regulator
NG829_04125	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
NG829_04130	COG1077	Cell shape determining protein MreB Mrl
NG829_04135	COG1792	Involved in formation and maintenance of cell shape
NG829_04145	COG0768	penicillin binding
NG829_04150	COG0772	Belongs to the SEDS family
NG829_04160	COG5434	Belongs to the glycosyl hydrolase 28 family
NG829_04180	COG1012	belongs to the aldehyde dehydrogenase family
NG829_04185	COG2951	lytic endotransglycosylase activity
NG829_04195	COG1686	Belongs to the peptidase S11 family
NG829_04230	COG0583	DNA-binding transcription factor activity
NG829_04245	COG1056	cytidyltransferase-related domain
NG829_04245	COG1051	belongs to the nudix hydrolase family
NG829_04275	COG1090	epimerase
NG829_04285	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
NG829_04290	COG0673	inositol 2-dehydrogenase activity
NG829_04295	COG2823	Periplasmic or secreted lipoprotein
NG829_04305	COG2205	protein histidine kinase activity
NG829_04310	COG0784	Response regulator, receiver
NG829_04315	COG4191	Histidine kinase
NG829_04325	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
NG829_04330	COG1028	Short-chain dehydrogenase reductase Sdr
NG829_04345	COG4305	rare lipoprotein A
NG829_04355	COG2188	Transcriptional regulator
NG829_04360	COG0738	Major facilitator superfamily
NG829_04365	COG1609	Transcriptional regulator
NG829_04370	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
NG829_04375	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
NG829_04420	COG0218	Necessary for normal cell division and for the maintenance of normal septation
NG829_04430	COG2207	Transcriptional regulator
NG829_04460	COG0393	Putative heavy-metal-binding
NG829_04465	COG2205	protein histidine kinase activity
NG829_04480	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
NG829_04485	COG3791	Glutathione-dependent formaldehyde-activating
NG829_04495	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NG829_04505	COG0697	spore germination
NG829_04515	COG1307	EDD domain protein, DegV family
NG829_04550	COG0402	S-adenosylhomocysteine deaminase activity
NG829_04560	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
NG829_04565	COG0726	polysaccharide deacetylase
NG829_04580	COG0436	Aminotransferase
NG829_04585	COG1162	GTPase activity
NG829_04615	COG2211	Major facilitator Superfamily
NG829_04625	COG1028	Short-chain dehydrogenase reductase Sdr
NG829_04630	COG2851	Citrate transporter
NG829_04650	COG0642	Histidine kinase
NG829_04660	COG2205	protein histidine kinase activity
NG829_04660	COG3292	Two component regulator propeller
NG829_04660	COG3292	Two component regulator propeller
NG829_04660	COG2205	protein histidine kinase activity
NG829_04660	COG0745	RESPONSE REGULATOR receiver
NG829_04660	COG0745	RESPONSE REGULATOR receiver
NG829_04675	COG0784	Response regulator, receiver
NG829_04675	COG2198	Histidine kinase
NG829_04675	COG2205	protein histidine kinase activity
NG829_04685	COG1301	dicarboxylic acid transport
NG829_04690	COG0280	phosphate acetyltransferase
NG829_04690	COG0281	malic enzyme
NG829_04715	COG1560	Kdo2-lipid A biosynthetic process
NG829_04720	COG1519	Transferase
NG829_04725	COG1538	Outer membrane efflux protein
NG829_04730	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
NG829_04755	COG0300	oxidoreductase activity
NG829_04775	COG3706	GGDEF domain
NG829_04780	COG0473	3-isopropylmalate dehydrogenase activity
NG829_04800	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
NG829_04820	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
NG829_04825	COG0405	Gamma-glutamyltransferase
NG829_04835	COG0840	transmembrane signaling receptor activity
NG829_04840	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
NG829_04850	COG1506	peptidase
NG829_04850	COG4946	Tricorn protease homolog
NG829_04850	COG0823	Involved in the tonB-independent uptake of proteins
NG829_04870	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
NG829_04880	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
NG829_04905	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
NG829_04920	COG0586	Pfam SNARE associated Golgi protein
NG829_04940	COG0346	lactoylglutathione lyase activity
NG829_04945	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
NG829_04950	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
NG829_04960	COG3241	Transfers electrons from cytochrome c551 to cytochrome oxidase
NG829_04965	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
NG829_04970	COG0352	thiamine-phosphate diphosphorylase activity
NG829_04975	COG1773	rubredoxin
NG829_04990	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
NG829_05000	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
NG829_05030	COG3079	Belongs to the UPF0149 family
NG829_05035	COG0006	proline dipeptidase activity
NG829_05045	COG0006	proline dipeptidase activity
NG829_05060	COG0635	Involved in the biosynthesis of porphyrin-containing compound
NG829_05070	COG0346	lactoylglutathione lyase activity
NG829_05075	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
NG829_05080	COG1561	YicC-like family, N-terminal region
NG829_05085	COG0194	GDP metabolic process
NG829_05090	COG1758	RNA polymerase activity
NG829_05095	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
NG829_05105	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
NG829_05115	COG0254	rRNA binding
NG829_05130	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
NG829_05160	COG0714	Associated with various cellular activities
NG829_05190	COG1301	dicarboxylic acid transport
NG829_05195	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
NG829_05265	COG4149	molybdate abc transporter
NG829_05270	COG0725	ABC transporter, periplasmic molybdate-binding protein
NG829_05280	COG0640	Transcriptional regulator
NG829_05315	COG3047	cAMP biosynthetic process
NG829_05320	COG3047	cAMP biosynthetic process
NG829_05325	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
NG829_05365	COG0469	pyruvate kinase activity
NG829_05375	COG3588	fructose-bisphosphate aldolase
NG829_05400	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
NG829_05435	COG0583	DNA-binding transcription factor activity
NG829_05445	COG5002	protein histidine kinase activity
NG829_05450	COG1393	Belongs to the ArsC family
NG829_05470	COG0175	sulfate reduction
NG829_05475	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
NG829_05480	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
NG829_05490	COG0529	Catalyzes the synthesis of activated sulfate
NG829_05490	COG2895	sulfate adenylyltransferase (ATP) activity
NG829_05495	COG0308	aminopeptidase N
NG829_05510	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NG829_05515	COG0438	transferase activity, transferring glycosyl groups
NG829_05535	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
NG829_05550	COG1609	Transcriptional regulator
NG829_05565	COG0179	Fumarylacetoacetate (FAA) hydrolase
NG829_05580	COG0471	metal ion transport
NG829_05580	COG3273	potassium ion transport
NG829_05585	COG0220	tRNA (guanine-N7-)-methyltransferase activity
NG829_05620	COG3511	phospholipase C
NG829_05630	COG0189	ligase activity
NG829_05640	COG0745	RESPONSE REGULATOR receiver
NG829_05655	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
NG829_05690	COG0045	succinate-CoA ligase (ADP-forming) activity
NG829_05695	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
NG829_05700	COG4993	Dehydrogenase
NG829_05705	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
NG829_05705	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
NG829_05715	COG1262	PFAM Formylglycine-generating sulfatase enzyme
NG829_05730	COG1125	glycine betaine transport
NG829_05740	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
NG829_05745	COG0564	pseudouridine synthase activity
NG829_05770	COG0840	transmembrane signaling receptor activity
NG829_05775	COG4993	Dehydrogenase
NG829_05785	COG3387	PFAM Glycoside hydrolase 15-related
NG829_05795	COG4771	TonB-dependent receptor
NG829_05830	COG0542	response to heat
NG829_05850	COG2223	nitrite transmembrane transporter activity
NG829_05865	COG0019	diaminopimelate decarboxylase activity
NG829_05870	COG4264	IucA IucC family
NG829_05875	COG2814	Major facilitator Superfamily
NG829_05890	COG4772	TonB-dependent receptor
NG829_05900	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
NG829_05900	COG4651	solute:proton antiporter activity
NG829_05935	COG0488	(ABC) transporter
NG829_05955	COG2755	lipolytic protein G-D-S-L family
NG829_05955	COG0657	acetylesterase activity
NG829_05980	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
NG829_06020	COG0632	four-way junction helicase activity
NG829_06025	COG3158	transport of potassium into the cell
NG829_06030	COG2255	four-way junction helicase activity
NG829_06035	COG0824	Thioesterase
NG829_06045	COG0848	biopolymer transport protein
NG829_06070	COG0602	queuosine metabolic process
NG829_06075	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
NG829_06110	COG0514	ATP-dependent DNA helicase (RecQ)
NG829_06115	COG0783	Belongs to the Dps family
NG829_06120	COG1643	Atp-dependent helicase
NG829_06140	COG0535	radical SAM domain protein
NG829_06160	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
NG829_06170	COG1216	Glycosyl transferase, family 2
NG829_06175	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
NG829_06185	COG1199	ATP-dependent helicase activity
NG829_06195	COG1017	nitric oxide dioxygenase activity
NG829_06195	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
NG829_06200	COG0625	glutathione transferase activity
NG829_06220	COG0189	ligase activity
NG829_06235	COG0835	chemotaxis
NG829_06240	COG0840	transmembrane signaling receptor activity
NG829_06245	COG0643	Histidine kinase
NG829_06245	COG0784	Response regulator, receiver
NG829_06245	COG2198	Histidine kinase
NG829_06250	COG2201	protein-glutamate methylesterase activity
NG829_06280	COG1446	asparaginase
NG829_06355	COG1733	regulation of RNA biosynthetic process
NG829_06360	COG0604	alcohol dehydrogenase
NG829_06400	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
NG829_06410	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
NG829_06425	COG3537	Alpha-1,2-mannosidase
NG829_06435	COG1486	melibiose metabolic process
NG829_06445	COG0531	amino acid
NG829_06465	COG1472	Belongs to the glycosyl hydrolase 3 family
NG829_06475	COG3525	Glycosyl hydrolase, family 20, catalytic domain
NG829_06480	COG3858	chitin binding
NG829_06480	COG1388	LysM domain
NG829_06495	COG0837	glucose binding
NG829_06500	COG1385	rRNA (uridine-N3-)-methyltransferase activity
NG829_06510	COG0494	nUDIX hydrolase
NG829_06515	COG1218	3'(2'),5'-bisphosphate nucleotidase
NG829_06520	COG3956	TIGRFAM MazG family protein
NG829_06535	COG0330	HflC and HflK could
NG829_06590	COG1960	acyl-CoA dehydrogenase activity
NG829_06600	COG1309	transcriptional regulator
NG829_06615	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
NG829_06620	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
NG829_06625	COG0463	Glycosyl transferase, family 2
NG829_06630	COG0517	IMP dehydrogenase activity
NG829_06645	COG1272	protein, Hemolysin III
NG829_06650	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
NG829_06660	COG1131	(ABC) transporter
NG829_06665	COG1725	Transcriptional regulator
NG829_06670	COG0739	heme binding
NG829_06675	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
NG829_06680	COG0626	cystathionine gamma-synthase activity
NG829_06685	COG0527	aspartate kinase activity
NG829_06685	COG0460	homoserine dehydrogenase
NG829_06700	COG2267	carboxylic ester hydrolase activity
NG829_06705	COG3706	GGDEF domain
NG829_06710	COG1760	l-serine dehydratase
NG829_06725	COG3038	cytochrome b561
NG829_06730	COG2353	YceI-like domain
NG829_06745	COG0477	Major facilitator Superfamily
NG829_06750	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
NG829_06760	COG1609	Transcriptional regulator
NG829_06760	COG2207	Transcriptional regulator
NG829_06765	COG1335	isochorismatase
NG829_06775	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NG829_06805	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
NG829_06820	COG0477	Major facilitator Superfamily
NG829_06845	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
NG829_06900	COG0519	Catalyzes the synthesis of GMP from XMP
NG829_06910	COG1678	Uncharacterized ACR, COG1678
NG829_06915	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
NG829_06935	COG0840	transmembrane signaling receptor activity
NG829_06940	COG0840	transmembrane signaling receptor activity
NG829_06950	COG1113	amino acid transport
NG829_06970	COG2239	Acts as a magnesium transporter
NG829_06975	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
NG829_06980	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
NG829_06990	COG1660	Displays ATPase and GTPase activities
NG829_07000	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
NG829_07015	COG1137	ATPase activity
NG829_07030	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
NG829_07065	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
NG829_07090	COG0628	permease
NG829_07100	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
NG829_07105	COG3178	'Phosphotransferase
NG829_07135	COG1477	protein flavinylation
NG829_07190	COG3279	Response regulator of the LytR AlgR family
NG829_07195	COG3275	phosphorelay sensor kinase activity
NG829_07245	COG1981	membrane
NG829_07280	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
NG829_07285	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
NG829_07290	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
NG829_07300	COG0750	zinc metalloprotease
NG829_07305	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
NG829_07310	COG0575	Belongs to the CDS family
NG829_07315	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
NG829_07325	COG0528	UMP kinase activity
NG829_07340	COG0052	Belongs to the universal ribosomal protein uS2 family
NG829_07375	COG0024	Methionine aminopeptidase
NG829_07400	COG1393	Belongs to the ArsC family
NG829_07410	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
NG829_07415	COG0367	asparagine synthase
NG829_07465	COG1070	Carbohydrate kinase
NG829_07475	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
NG829_07515	COG1846	Transcriptional regulator
NG829_07525	COG1566	PFAM secretion protein HlyD family protein
NG829_07530	COG2814	Major facilitator Superfamily
NG829_07565	COG0557	exoribonuclease II activity
NG829_07575	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
NG829_07595	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
NG829_07615	COG0704	Plays a role in the regulation of phosphate uptake
NG829_07625	COG0581	inorganic phosphate transmembrane transporter activity
NG829_07630	COG0573	inorganic phosphate transmembrane transporter activity
NG829_07635	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
NG829_07640	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
NG829_07660	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
NG829_07670	COG1024	Enoyl-CoA hydratase
NG829_07715	COG0488	(ABC) transporter
NG829_07730	COG4999	Histidine kinase
NG829_07730	COG3850	Histidine kinase
NG829_07730	COG2205	protein histidine kinase activity
NG829_07730	COG3437	response regulator, receiver
NG829_07735	COG2733	membrane
NG829_07755	COG0686	Belongs to the AlaDH PNT family
NG829_07760	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
NG829_07765	COG1396	sequence-specific DNA binding
NG829_07765	COG1917	Cupin 2, conserved barrel domain protein
NG829_07770	COG1012	belongs to the aldehyde dehydrogenase family
NG829_07780	COG1309	transcriptional regulator
NG829_07790	COG2818	Glycosylase
NG829_07800	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
NG829_07805	COG0243	molybdopterin cofactor binding
NG829_07815	COG0477	Major facilitator Superfamily
NG829_07825	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
NG829_07830	COG0174	glutamine synthetase
NG829_07835	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
NG829_07840	COG0174	glutamine synthetase
NG829_07870	COG3842	ATPase activity
NG829_07875	COG1176	ABC-type spermidine putrescine transport system, permease component I
NG829_07880	COG1177	transmembrane transport
NG829_07885	COG1012	belongs to the aldehyde dehydrogenase family
NG829_07900	COG4535	Mg2 and Co2 transporter CorC
NG829_07910	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
NG829_07925	COG1702	phosphate starvation-inducible protein PhoH
NG829_07960	COG0741	lytic transglycosylase activity
NG829_07965	COG0723	plastoquinol--plastocyanin reductase activity
NG829_07970	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
NG829_07975	COG2857	Cytochrome c1
NG829_07980	COG0625	glutathione transferase activity
NG829_07985	COG2969	positive regulation of protein catabolic process
NG829_08025	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
NG829_08030	COG1028	Short-chain dehydrogenase reductase Sdr
NG829_08035	COG2095	MarC family integral membrane protein
NG829_08045	COG1611	Belongs to the LOG family
NG829_08050	COG3275	phosphorelay sensor kinase activity
NG829_08090	COG4969	Belongs to the N-Me-Phe pilin family
NG829_08110	COG3505	Type IV secretory pathway VirD4
NG829_08135	COG2948	multi-organism process
NG829_08185	COG0366	Alpha amylase catalytic
NG829_08195	COG1082	Xylose isomerase domain protein TIM barrel
NG829_08225	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
NG829_08235	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
NG829_08240	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
NG829_08245	COG0072	phenylalanine-tRNA ligase activity
NG829_08245	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
NG829_08500	COG1196	nuclear chromosome segregation
NG829_08565	COG0438	transferase activity, transferring glycosyl groups
NG829_08570	COG0438	transferase activity, transferring glycosyl groups
NG829_08580	COG0438	transferase activity, transferring glycosyl groups
NG829_08605	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
NG829_08615	COG1960	acyl-CoA dehydrogenase activity
NG829_08620	COG2197	response regulator
NG829_08630	COG0515	serine threonine protein kinase
NG829_08630	COG2815	serine threonine protein kinase
NG829_08645	COG1404	Belongs to the peptidase S8 family
NG829_08650	COG1404	Belongs to the peptidase S8 family
NG829_08670	COG1846	Transcriptional regulator
NG829_08690	COG3040	lipid binding
NG829_08700	COG1570	exodeoxyribonuclease VII activity
NG829_08705	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
NG829_08710	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
NG829_08710	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
NG829_08715	COG0802	atpase or kinase
NG829_08720	COG0860	N-Acetylmuramoyl-L-alanine amidase
NG829_08725	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
NG829_08745	COG1028	Short-chain dehydrogenase reductase Sdr
NG829_08765	COG2081	HI0933 family
NG829_08770	COG4681	YaeQ
NG829_08780	COG0625	glutathione transferase activity
NG829_08800	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NG829_08820	COG0513	Belongs to the DEAD box helicase family
NG829_08825	COG0488	(ABC) transporter
NG829_08840	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
NG829_08850	COG1472	Belongs to the glycosyl hydrolase 3 family
NG829_08910	COG0339	signal peptide processing
NG829_08915	COG0386	Belongs to the glutathione peroxidase family
NG829_08945	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
NG829_08950	COG1595	DNA-templated transcription, initiation
NG829_08960	COG0625	glutathione transferase activity
NG829_09000	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
NG829_09005	COG2203	Gaf domain
NG829_09005	COG3706	GGDEF domain
NG829_09005	COG5001	Diguanylate cyclase
NG829_09005	COG4251	negative regulation of phosphorylation
NG829_09010	COG0084	hydrolase, TatD family'
NG829_09025	COG1960	acyl-CoA dehydrogenase activity
NG829_09045	COG0305	Participates in initiation and elongation during chromosome replication
NG829_09055	COG0415	Belongs to the DNA photolyase family
NG829_09065	COG2885	chlorophyll binding
NG829_09065	COG3047	cAMP biosynthetic process
NG829_09070	COG0583	DNA-binding transcription factor activity
NG829_09105	COG3706	GGDEF domain
NG829_09150	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
NG829_09165	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
NG829_09170	COG0735	belongs to the Fur family
NG829_09175	COG0497	DNA recombination
NG829_09180	COG1420	regulation of RNA biosynthetic process
NG829_09185	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
NG829_09190	COG0443	Heat shock 70 kDa protein
NG829_09195	COG0484	heat shock protein binding
NG829_09200	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
NG829_09215	COG1132	(ABC) transporter
NG829_09280	COG1253	flavin adenine dinucleotide binding
NG829_09300	COG0436	Aminotransferase
NG829_09305	COG0697	spore germination
NG829_09325	COG1131	(ABC) transporter
NG829_09330	COG1725	Transcriptional regulator
NG829_09340	COG0386	Belongs to the glutathione peroxidase family
NG829_09355	COG2900	Belongs to the SlyX family
NG829_09365	COG2755	lipolytic protein G-D-S-L family
NG829_09365	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
NG829_09380	COG0646	methionine synthase
NG829_09380	COG1410	methionine synthase
NG829_09390	COG2226	methyltransferase
NG829_09395	COG1960	acyl-CoA dehydrogenase activity
NG829_09400	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NG829_09405	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NG829_09415	COG2902	Dehydrogenase
NG829_09450	COG2925	Exonuclease
NG829_09460	COG3844	kynureninase activity
NG829_09475	COG0288	reversible hydration of carbon dioxide
NG829_09520	COG2197	response regulator
NG829_09545	COG0316	Belongs to the HesB IscA family
NG829_09555	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
NG829_09560	COG0359	binds to the 23S rRNA
NG829_09575	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
NG829_09590	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
NG829_09600	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
NG829_09610	COG4993	Dehydrogenase
NG829_09645	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
NG829_09675	COG4221	oxidoreductase activity
NG829_09710	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
NG829_09715	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
NG829_09720	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
NG829_09725	COG0077	Prephenate dehydratase
NG829_09725	COG1605	Chorismate mutase
NG829_09750	COG0583	DNA-binding transcription factor activity
NG829_09770	COG1122	ATPase activity
NG829_09845	COG1530	ribonuclease E activity
NG829_09855	COG3064	Membrane
NG829_09860	COG0428	transporter
NG829_09875	COG0316	Belongs to the HesB IscA family
NG829_09875	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
NG829_09895	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NG829_09905	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NG829_09915	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
NG829_09920	COG2957	Belongs to the agmatine deiminase family
NG829_09930	COG0257	Belongs to the bacterial ribosomal protein bL36 family
NG829_09935	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
NG829_09945	COG0776	regulation of translation
NG829_09955	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
NG829_09970	COG1210	Utp--glucose-1-phosphate uridylyltransferase
NG829_09975	COG0183	Belongs to the thiolase family
NG829_09980	COG1024	Enoyl-CoA hydratase
NG829_09980	COG1250	3-hydroxyacyl-CoA dehydrogenase
NG829_09995	COG0820	rRNA (adenine-C2-)-methyltransferase activity
NG829_10005	COG1426	Protein conserved in bacteria
NG829_10010	COG2976	Protein conserved in bacteria
NG829_10015	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
NG829_10020	COG1160	GTP binding
NG829_10025	COG0746	molybdenum cofactor guanylyltransferase activity
NG829_10035	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
NG829_10040	COG0475	glutathione-regulated potassium exporter activity
NG829_10040	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
NG829_10045	COG1073	alpha beta
NG829_10055	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
NG829_10065	COG0518	GMP synthase (glutamine-hydrolyzing) activity
NG829_10065	COG0519	Catalyzes the synthesis of GMP from XMP
NG829_10075	COG0431	NADPH-dependent FMN reductase
NG829_10090	COG1247	-acetyltransferase
NG829_10095	COG1733	regulation of RNA biosynthetic process
NG829_10100	COG3002	Belongs to the UPF0753 family
NG829_10105	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
NG829_10130	COG5002	protein histidine kinase activity
NG829_10170	COG1914	H( )-stimulated, divalent metal cation uptake system
NG829_10175	COG1321	iron dependent repressor
NG829_10185	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
NG829_10190	COG0668	transmembrane transport
NG829_10225	COG1028	Short-chain dehydrogenase reductase Sdr
NG829_10230	COG1183	phosphatidylcholine synthase activity
NG829_10240	COG3243	poly(R)-hydroxyalkanoic acid synthase
NG829_10250	COG1983	PspC domain protein
NG829_10260	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
NG829_10260	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
NG829_10270	COG0784	Response regulator, receiver
NG829_10270	COG4191	Histidine kinase
NG829_10275	COG2183	response to ionizing radiation
NG829_10280	COG0784	Response regulator, receiver
NG829_10280	COG2205	protein histidine kinase activity
NG829_10280	COG5002	protein histidine kinase activity
NG829_10340	COG0745	RESPONSE REGULATOR receiver
NG829_10345	COG2205	protein histidine kinase activity
NG829_10365	COG0714	Associated with various cellular activities
NG829_10375	COG3552	Protein containing von Willebrand factor type A (VWA) domain
NG829_10415	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
NG829_10420	COG0583	DNA-binding transcription factor activity
NG829_10445	COG1136	(ABC) transporter
NG829_10470	COG1132	(ABC) transporter
NG829_10490	COG0438	transferase activity, transferring glycosyl groups
NG829_10495	COG0438	transferase activity, transferring glycosyl groups
NG829_10510	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
NG829_10530	COG1215	transferase activity, transferring glycosyl groups
NG829_10535	COG2244	polysaccharide biosynthetic process
NG829_10585	COG1595	DNA-templated transcription, initiation
NG829_10595	COG1404	Belongs to the peptidase S8 family
NG829_10620	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
NG829_10655	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
NG829_10660	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
NG829_10665	COG1230	cation diffusion facilitator family transporter
NG829_10680	COG1674	ftsk spoiiie
NG829_10685	COG0492	ferredoxin-NADP+ reductase activity
NG829_10705	COG0542	response to heat
NG829_10725	COG0482	sulfurtransferase activity
NG829_10730	COG2915	High frequency lysogenization protein hflD homolog
NG829_10745	COG1116	anion transmembrane transporter activity
NG829_10770	COG4191	Histidine kinase
NG829_10790	COG0784	Response regulator, receiver
NG829_10790	COG0835	chemotaxis
NG829_10800	COG1558	bacterial-type flagellum-dependent cell motility
NG829_10810	COG1749	Flagellar hook protein flgE
NG829_10815	COG4787	bacterial-type flagellum-dependent cell motility
NG829_10825	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
NG829_10830	COG1706	bacterial-type flagellum-dependent cell motility
NG829_10850	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
NG829_10855	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
NG829_10860	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
NG829_10885	COG2197	response regulator
NG829_10895	COG2201	protein-glutamate methylesterase activity
NG829_10915	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
NG829_10920	COG1028	Short-chain dehydrogenase reductase Sdr
NG829_10925	COG1028	Short-chain dehydrogenase reductase Sdr
NG829_10960	COG1677	Flagellar hook-basal body complex protein FliE
NG829_10970	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
NG829_11010	COG3190	flagellar
NG829_11070	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
NG829_11075	COG2198	Histidine kinase
NG829_11075	COG0784	Response regulator, receiver
NG829_11075	COG0643	Histidine kinase
NG829_11080	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
NG829_11090	COG1192	Involved in chromosome partitioning
NG829_11095	COG0835	chemotaxis
NG829_11105	COG0745	RESPONSE REGULATOR receiver
NG829_11115	COG0840	transmembrane signaling receptor activity
NG829_11120	COG0840	transmembrane signaling receptor activity
NG829_11125	COG0840	transmembrane signaling receptor activity
NG829_11130	COG0840	transmembrane signaling receptor activity
NG829_11140	COG0840	transmembrane signaling receptor activity
NG829_11145	COG0840	transmembrane signaling receptor activity
NG829_11150	COG0840	transmembrane signaling receptor activity
NG829_11160	COG0840	transmembrane signaling receptor activity
NG829_11170	COG0840	transmembrane signaling receptor activity
NG829_11180	COG0835	chemotaxis
NG829_11190	COG0840	transmembrane signaling receptor activity
NG829_11195	COG0840	transmembrane signaling receptor activity
NG829_11200	COG0840	transmembrane signaling receptor activity
NG829_11215	COG2201	protein-glutamate methylesterase activity
NG829_11245	COG0318	PFAM AMP-dependent synthetase and ligase
NG829_11250	COG1024	Enoyl-CoA hydratase
NG829_11255	COG2205	protein histidine kinase activity
NG829_11255	COG2198	Histidine kinase
NG829_11255	COG0784	Response regulator, receiver
NG829_11265	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
NG829_11280	COG4676	Protein conserved in bacteria
NG829_11295	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
NG829_11300	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
NG829_11310	COG0505	Belongs to the CarA family
NG829_11320	COG2258	MOSC domain
NG829_11325	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NG829_11345	COG1024	Enoyl-CoA hydratase
NG829_11365	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
NG829_11385	COG0277	FAD linked oxidase domain protein
NG829_11390	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
NG829_11400	COG0531	amino acid
NG829_11405	COG0531	amino acid
NG829_11410	COG0235	Class ii aldolase
NG829_11415	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
NG829_11420	COG4229	Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene)
NG829_11435	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
NG829_11435	COG0140	phosphoribosyl-ATP diphosphatase activity
NG829_11450	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
NG829_11470	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
NG829_11490	COG0124	histidyl-tRNA synthetase
NG829_11495	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
NG829_11505	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
NG829_11535	COG1012	belongs to the aldehyde dehydrogenase family
NG829_11550	COG0167	dihydroorotate dehydrogenase activity
NG829_11555	COG0812	UDP-N-acetylmuramate dehydrogenase activity
NG829_11565	COG1794	racemase activity, acting on amino acids and derivatives
NG829_11575	COG0671	phosphoesterase, PA-phosphatase related
NG829_11580	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
NG829_11590	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
NG829_11605	COG1472	Belongs to the glycosyl hydrolase 3 family
NG829_11670	COG0166	Belongs to the GPI family
NG829_11685	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
NG829_11695	COG0617	tRNA 3'-terminal CCA addition
NG829_11710	COG0477	Major facilitator Superfamily
NG829_11715	COG2115	Belongs to the xylose isomerase family
NG829_11720	COG1070	Carbohydrate kinase
NG829_11725	COG1501	Belongs to the glycosyl hydrolase 31 family
NG829_11750	COG0800	Aldolase
NG829_11755	COG4948	Mandelate Racemase Muconate Lactonizing
NG829_11765	COG3734	2-keto-3-deoxy-galactonokinase
NG829_11770	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
NG829_11780	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
NG829_11790	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
NG829_11795	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
NG829_11810	COG0351	phosphomethylpyrimidine kinase
NG829_11810	COG0352	thiamine-phosphate diphosphorylase activity
NG829_11830	COG1028	Short-chain dehydrogenase reductase Sdr
NG829_11840	COG0583	DNA-binding transcription factor activity
NG829_11845	COG1741	Belongs to the pirin family
NG829_11880	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
NG829_11885	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
NG829_11890	COG2137	regulation of response to DNA damage stimulus
NG829_11895	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
NG829_11900	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
NG829_11905	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
NG829_11910	COG1546	Belongs to the CinA family
NG829_11915	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
NG829_11930	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
NG829_11935	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
NG829_11940	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
NG829_11945	COG1534	Rna-binding protein
NG829_11960	COG1238	metal cluster binding
NG829_11970	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
NG829_11985	COG1595	DNA-templated transcription, initiation
NG829_12005	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
NG829_12015	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
NG829_12025	COG0148	phosphopyruvate hydratase activity
NG829_12035	COG2877	3-deoxy-8-phosphooctulonate synthase activity
NG829_12060	COG2134	cdp-diacylglycerol pyrophosphatase
NG829_12070	COG0306	phosphate transporter
NG829_12095	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
NG829_12125	COG5001	Diguanylate cyclase
NG829_12125	COG3447	MASE1 domain protein
NG829_12125	COG5002	protein histidine kinase activity
NG829_12135	COG0069	glutamate synthase activity
NG829_12140	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
NG829_12155	COG1609	Transcriptional regulator
NG829_12160	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
NG829_12160	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
NG829_12165	COG1105	Belongs to the carbohydrate kinase PfkB family
NG829_12170	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
NG829_12170	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
NG829_12200	COG0577	efflux transmembrane transporter activity
NG829_12200	COG1136	(ABC) transporter
NG829_12240	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
NG829_12250	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
NG829_12255	COG4359	Dephosphorylates 2-hydroxy-3-keto-5-methylthiopentenyl- 1-phosphate (HK-MTPenyl-1-P) yielding 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene)
NG829_12260	COG0604	alcohol dehydrogenase
NG829_12265	COG0604	alcohol dehydrogenase
NG829_12270	COG1309	transcriptional regulator
NG829_12310	COG0635	Involved in the biosynthesis of porphyrin-containing compound
NG829_12325	COG0348	domain, Protein
NG829_12400	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
NG829_12410	COG1663	tetraacyldisaccharide 4'-kinase activity
NG829_12420	COG0848	biopolymer transport protein
NG829_12425	COG0811	peptide transport
NG829_12430	COG2333	competence protein COMEC
NG829_12430	COG0658	competence protein
NG829_12440	COG1136	(ABC) transporter
NG829_12445	COG4591	ABC-type transport system involved in lipoprotein release permease component
NG829_12470	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
NG829_12475	COG2009	succinate dehydrogenase
NG829_12485	COG0354	folic acid binding
NG829_12490	COG3842	ATPase activity
NG829_12495	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
NG829_12510	COG0129	dihydroxy-acid dehydratase activity
NG829_12515	COG0800	Aldolase
NG829_12525	COG0395	ABC-type sugar transport system, permease component
NG829_12535	COG2182	Extracellular solute-binding protein
NG829_12560	COG2350	Protein conserved in bacteria
NG829_12565	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
NG829_12570	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
NG829_12575	COG1187	pseudouridine synthase activity
NG829_12595	COG5295	Hep Hag repeat protein
NG829_12625	COG2205	protein histidine kinase activity
NG829_12625	COG0784	Response regulator, receiver
NG829_12645	COG0436	Aminotransferase
NG829_12650	COG4133	protoheme IX ABC transporter activity
NG829_12695	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
NG829_12700	COG1404	Belongs to the peptidase S8 family
NG829_12705	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
NG829_12710	COG4988	ABC transporter
NG829_12720	COG1294	oxidase, subunit
NG829_12765	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
NG829_12780	COG0165	Argininosuccinate lyase
NG829_12785	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
NG829_12795	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
NG829_12800	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
NG829_12810	COG0137	argininosuccinate synthase activity
NG829_12815	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
NG829_12830	COG2166	iron-sulfur cluster assembly
NG829_12865	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
NG829_12880	COG3706	GGDEF domain
NG829_12885	COG4677	pectinesterase activity
NG829_12905	COG0402	S-adenosylhomocysteine deaminase activity
NG829_12910	COG3548	integral membrane protein
NG829_12920	COG1509	lysine 2,3-aminomutase activity
NG829_12945	COG0840	transmembrane signaling receptor activity
NG829_12950	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
NG829_12955	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
NG829_12960	COG1862	Preprotein translocase
NG829_12970	COG1132	(ABC) transporter
NG829_13010	COG1187	pseudouridine synthase activity
NG829_13060	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
NG829_13100	COG2080	2 iron, 2 sulfur cluster binding
NG829_13105	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
NG829_13110	COG1529	Aldehyde oxidase and xanthine dehydrogenase
NG829_13115	COG0746	molybdenum cofactor guanylyltransferase activity
NG829_13120	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
NG829_13125	COG3214	Protein conserved in bacteria
NG829_13135	COG0430	RNA-3'-phosphate cyclase activity
NG829_13140	COG1690	Belongs to the RtcB family
NG829_13150	COG4650	regulator
NG829_13155	COG0735	belongs to the Fur family
NG829_13180	COG4452	Inner membrane protein CreD
NG829_13185	COG2205	protein histidine kinase activity
NG829_13190	COG0745	RESPONSE REGULATOR receiver
NG829_13200	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
NG829_13205	COG3878	Protein conserved in bacteria
NG829_13215	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
NG829_13225	COG0643	Histidine kinase
NG829_13225	COG2198	Histidine kinase
NG829_13230	COG0840	transmembrane signaling receptor activity
NG829_13235	COG0840	transmembrane signaling receptor activity
NG829_13235	COG3290	protein histidine kinase activity
NG829_13240	COG0840	transmembrane signaling receptor activity
NG829_13270	COG2211	Major facilitator Superfamily
NG829_13280	COG2977	Belongs to the P-Pant transferase superfamily
NG829_13290	COG0588	phosphoglycerate mutase activity
NG829_13300	COG1741	Belongs to the pirin family
NG829_13310	COG1741	Belongs to the pirin family
NG829_13315	COG1966	Carbon starvation protein
NG829_13320	COG2879	small protein
NG829_13350	COG1506	peptidase
NG829_13350	COG0823	Involved in the tonB-independent uptake of proteins
NG829_13355	COG1297	OPT oligopeptide transporter protein
NG829_13360	COG3104	oligopeptide transport
NG829_13370	COG1609	Transcriptional regulator
NG829_13380	COG2211	Major facilitator Superfamily
NG829_13385	COG0673	inositol 2-dehydrogenase activity
NG829_13395	COG2010	Cytochrome c
NG829_13420	COG0629	single-stranded DNA binding
NG829_13425	COG0142	geranyltranstransferase activity
NG829_13455	COG0527	aspartate kinase activity
NG829_13465	COG0384	phenazine biosynthesis protein PhzF
NG829_13475	COG1764	response to oxidative stress
NG829_13490	COG0739	heme binding
NG829_13505	COG0693	protein deglycase activity
NG829_13520	COG0719	Fe-S assembly protein
NG829_13525	COG0396	ATPase activity
NG829_13530	COG0719	Fe-S assembly protein
NG829_13535	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
NG829_13545	COG2146	nitrite reductase [NAD(P)H] activity
NG829_13555	COG0840	transmembrane signaling receptor activity
NG829_13560	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
NG829_13565	COG3291	Pkd domain containing protein
NG829_13570	COG1538	Outer membrane efflux protein
NG829_13580	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NG829_13590	COG0642	Histidine kinase
NG829_13595	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
NG829_13600	COG0405	Gamma-glutamyltransferase
NG829_13605	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
NG829_13620	COG0742	ribosomal rna small subunit methyltransferase
NG829_13625	COG0326	Molecular chaperone. Has ATPase activity
NG829_13650	COG3507	Belongs to the glycosyl hydrolase 43 family
NG829_13660	COG4206	TonB-dependent receptor
NG829_13685	COG0531	amino acid
NG829_13700	COG0006	proline dipeptidase activity
NG829_13710	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
NG829_13725	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
NG829_13730	COG3938	Belongs to the proline racemase family
NG829_13740	COG0552	protein localization to endoplasmic reticulum
NG829_13745	COG1194	a g-specific adenine glycosylase
NG829_13790	COG0835	chemotaxis
NG829_13795	COG3290	protein histidine kinase activity
NG829_13795	COG0840	transmembrane signaling receptor activity
NG829_13800	COG3290	protein histidine kinase activity
NG829_13800	COG0840	transmembrane signaling receptor activity
NG829_13805	COG1201	RNA secondary structure unwinding
NG829_13815	COG5001	Diguanylate cyclase
NG829_13815	COG3300	MHYT domain
NG829_13820	COG1185	polyribonucleotide nucleotidyltransferase activity
NG829_13845	COG0195	Participates in both transcription termination and antitermination
NG829_13860	COG1007	ATP synthesis coupled electron transport
NG829_13895	COG1034	ATP synthesis coupled electron transport
NG829_13900	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
NG829_13905	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
NG829_13910	COG0649	NAD binding
NG829_13915	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
NG829_13925	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
NG829_13945	COG1028	Short-chain dehydrogenase reductase Sdr
NG829_13965	COG0159	tryptophan synthase activity
NG829_13970	COG0133	tryptophan synthase activity
NG829_14005	COG0135	phosphoribosylanthranilate isomerase activity
NG829_14010	COG0101	tRNA pseudouridine synthase activity
NG829_14020	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
NG829_14030	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
NG829_14035	COG2890	protein-(glutamine-N5) methyltransferase activity
NG829_14050	COG0741	lytic transglycosylase activity
NG829_14055	COG0433	COG0433 Predicted ATPase
NG829_14065	COG0494	nUDIX hydrolase
NG829_14080	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
NG829_14105	COG1714	RDD family
NG829_14110	COG0717	Belongs to the dCTP deaminase family
NG829_14115	COG0489	protein tyrosine kinase activity
NG829_14120	COG4771	TonB-dependent receptor
NG829_14130	COG0457	Tetratricopeptide repeat
NG829_14155	COG3590	peptidase
NG829_14185	COG2311	Membrane
NG829_14195	COG0791	NLP P60 protein
NG829_14200	COG0791	NLP P60 protein
NG829_14205	COG2226	methyltransferase
NG829_14215	COG1607	acyl-coa hydrolase
NG829_14220	COG2226	methyltransferase
NG829_14225	COG1301	dicarboxylic acid transport
NG829_14230	COG1785	Belongs to the alkaline phosphatase family
NG829_14240	COG0037	tRNA processing
NG829_14245	COG1722	exodeoxyribonuclease VII activity
NG829_14250	COG0142	geranyltranstransferase activity
NG829_14255	COG4104	PAAR repeat-containing protein
NG829_14280	COG0312	modulator of DNA gyrase
NG829_14285	COG3028	Belongs to the UPF0307 family
NG829_14290	COG0312	modulator of DNA gyrase
NG829_14310	COG2968	Membrane
NG829_14330	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
NG829_14345	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
NG829_14360	COG0495	leucyl-tRNA aminoacylation
NG829_14370	COG3118	belongs to the thioredoxin family
NG829_14380	COG5001	Diguanylate cyclase
NG829_14380	COG4251	negative regulation of phosphorylation
NG829_14380	COG3706	GGDEF domain
NG829_14380	COG2203	Gaf domain
NG829_14395	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
NG829_14405	COG2040	homocysteine
NG829_14415	COG0346	lactoylglutathione lyase activity
NG829_14425	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
NG829_14425	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
NG829_14435	COG2878	Part of a membrane complex involved in electron transport
NG829_14450	COG1595	DNA-templated transcription, initiation
NG829_14475	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
NG829_14495	COG0251	oxidation-reduction process
NG829_14505	COG0392	lysyltransferase activity
NG829_14540	COG2814	Major facilitator Superfamily
NG829_14545	COG1902	pentaerythritol trinitrate reductase activity
NG829_14550	COG2824	Alkylphosphonate utilization operon protein PhnA
NG829_14560	COG1047	Peptidyl-prolyl cis-trans
NG829_14595	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
NG829_14605	COG1451	nucleotide metabolic process
NG829_14610	COG1187	pseudouridine synthase activity
NG829_14620	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
NG829_14625	COG4771	TonB-dependent receptor
NG829_14640	COG5487	UPF0391 membrane protein
NG829_14680	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
NG829_14680	COG1703	isobutyryl-CoA mutase activity
NG829_14680	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
NG829_14700	COG0183	Belongs to the thiolase family
NG829_14730	COG1960	acyl-CoA dehydrogenase activity
NG829_14735	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
NG829_14735	COG1793	dna ligase
NG829_14740	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
NG829_14740	COG1793	dna ligase
NG829_14745	COG1201	RNA secondary structure unwinding
NG829_14755	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
NG829_14760	COG1278	Cold shock
NG829_14765	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
NG829_14770	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
NG829_14775	COG1472	Belongs to the glycosyl hydrolase 3 family
NG829_14785	COG2954	triphosphatase activity
NG829_14810	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
NG829_14825	COG0681	Belongs to the peptidase S26 family
NG829_14830	COG0481	GTPase activity
NG829_14835	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
NG829_14850	COG1250	3-hydroxyacyl-CoA dehydrogenase
NG829_14850	COG1024	Enoyl-CoA hydratase
NG829_14870	COG2855	membrane
NG829_14885	COG3867	Arabinogalactan endo-beta-1,4-galactanase
NG829_14890	COG3250	beta-galactosidase activity
NG829_14900	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
NG829_14915	COG0542	response to heat
NG829_14930	COG0534	Mate efflux family protein
NG829_14935	COG0335	large ribosomal subunit rRNA binding
NG829_14945	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
NG829_14970	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
NG829_14975	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
NG829_14995	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
NG829_15005	COG0475	glutathione-regulated potassium exporter activity
NG829_15015	COG0625	glutathione transferase activity
NG829_15020	COG1172	Belongs to the binding-protein-dependent transport system permease family
NG829_15025	COG1172	Belongs to the binding-protein-dependent transport system permease family
NG829_15030	COG1129	ABC transporter
NG829_15035	COG1879	ABC-type sugar transport system periplasmic component
NG829_15040	COG1012	belongs to the aldehyde dehydrogenase family
NG829_15055	COG1028	Short-chain dehydrogenase reductase Sdr
NG829_15060	COG0129	dihydroxy-acid dehydratase activity
NG829_15105	COG0740	serine-type endopeptidase activity
NG829_15110	COG1595	DNA-templated transcription, initiation
NG829_15115	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
NG829_15120	COG1845	cytochrome c oxidase, subunit III
NG829_15125	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
NG829_15150	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
NG829_15165	COG0196	riboflavin kinase activity
NG829_15180	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
NG829_15185	COG0211	Belongs to the bacterial ribosomal protein bL27 family
NG829_15190	COG0261	This protein binds to 23S rRNA in the presence of protein L20
NG829_15195	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
NG829_15200	COG0824	Thioesterase
NG829_15210	COG1024	Enoyl-CoA hydratase
NG829_15215	COG1946	Acyl-CoA thioesterase
NG829_15230	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
NG829_15245	COG0840	transmembrane signaling receptor activity
NG829_15265	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
NG829_15270	COG4638	Rieske (2fe-2S)
NG829_15300	COG1073	alpha beta
NG829_15340	COG2197	response regulator
NG829_15345	COG4585	Histidine kinase
NG829_15355	COG0850	regulation of cytokinetic process
NG829_15360	COG2894	cell division
NG829_15365	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
NG829_15375	COG2205	protein histidine kinase activity
NG829_15380	COG0745	RESPONSE REGULATOR receiver
NG829_15390	COG2194	sulfuric ester hydrolase activity
NG829_15445	COG2814	Major facilitator Superfamily
NG829_15450	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
NG829_15450	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
NG829_15455	COG0753	catalase activity
NG829_15460	COG1063	alcohol dehydrogenase
NG829_15565	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
NG829_15575	COG0330	HflC and HflK could
NG829_15580	COG0330	HflC and HflK could
NG829_15585	COG0604	alcohol dehydrogenase
NG829_15605	COG0678	peroxiredoxin activity
NG829_15615	COG4953	penicillin-binding protein 1C
NG829_15635	COG0577	efflux transmembrane transporter activity
NG829_15635	COG1136	(ABC) transporter
NG829_15660	COG2373	Large extracellular alpha-helical protein
NG829_15725	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
NG829_15740	COG0587	DNA-directed DNA polymerase activity
NG829_15750	COG0640	Transcriptional regulator
NG829_15755	COG2161	toxin-antitoxin pair type II binding
NG829_15780	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
NG829_15785	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
NG829_15790	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
NG829_15805	COG1028	Short-chain dehydrogenase reductase Sdr
NG829_15810	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
NG829_15815	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
NG829_15820	COG0333	Belongs to the bacterial ribosomal protein bL32 family
NG829_15825	COG1399	metal-binding, possibly nucleic acid-binding protein
NG829_15850	COG0714	Associated with various cellular activities
NG829_15870	COG0537	adenosine 5'-monophosphoramidase activity
NG829_15885	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
NG829_15900	COG0314	molybdopterin synthase activity
NG829_15905	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
NG829_15910	COG0315	cyclic pyranopterin monophosphate synthase activity
NG829_15920	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
NG829_15925	COG1234	tRNA 3'-trailer cleavage
NG829_15930	COG3642	lipopolysaccharide core region biosynthetic process
NG829_15935	COG0859	PFAM glycosyl transferase family 9
NG829_15955	COG0631	protein serine/threonine phosphatase activity
NG829_15965	COG0328	RNA-DNA hybrid ribonuclease activity
NG829_15975	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
NG829_15985	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
NG829_16025	COG0544	peptidyl-prolyl cis-trans isomerase activity
NG829_16060	COG0473	3-isopropylmalate dehydrogenase activity
NG829_16075	COG4783	chaperone-mediated protein folding
NG829_16080	COG0745	RESPONSE REGULATOR receiver
NG829_16090	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
NG829_16095	COG0248	Ppx GppA phosphatase
NG829_16100	COG0438	transferase activity, transferring glycosyl groups
NG829_16105	COG0671	phosphoesterase, PA-phosphatase related
NG829_16120	COG3291	Pkd domain containing protein
NG829_16125	COG2833	Protein of unknown function (DUF455)
NG829_16150	COG0285	dihydrofolate synthase activity
NG829_16155	COG0588	phosphoglycerate mutase activity
NG829_16175	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
NG829_16180	COG4208	sulfate ABC transporter
NG829_16225	COG0583	DNA-binding transcription factor activity
NG829_16240	COG0667	Aldo Keto reductase
NG829_16245	COG0604	alcohol dehydrogenase
NG829_16250	COG1902	pentaerythritol trinitrate reductase activity
NG829_16250	COG0446	pyridine nucleotide-disulphide oxidoreductase
NG829_16270	COG0584	glycerophosphoryl diester phosphodiesterase
NG829_16290	COG0625	glutathione transferase activity
NG829_16310	COG0625	glutathione transferase activity
NG829_16330	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
NG829_16335	COG1217	gtp-binding protein TYPA
NG829_16350	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
NG829_16370	COG0203	ribosomal protein L17
NG829_16380	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
NG829_16390	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
NG829_16395	COG0201	protein transport
NG829_16405	COG1841	ribosomal large subunit assembly
NG829_16415	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
NG829_16430	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
NG829_16435	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
NG829_16440	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
NG829_16450	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
NG829_16455	COG0255	Belongs to the universal ribosomal protein uL29 family
NG829_16465	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
NG829_16475	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
NG829_16480	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
NG829_16485	COG0089	rRNA binding
NG829_16490	COG0088	Forms part of the polypeptide exit tunnel
NG829_16500	COG0051	transcription antitermination factor activity, RNA binding
NG829_16505	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
NG829_16510	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
NG829_16515	COG0049	tRNA binding
NG829_16525	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
NG829_16535	COG0222	ribosome binding
NG829_16540	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
NG829_16555	COG0250	Participates in transcription elongation, termination and antitermination
NG829_16560	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
NG829_16570	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
NG829_16590	COG0012	GTP binding
NG829_16595	COG0193	aminoacyl-tRNA hydrolase activity
NG829_16605	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
NG829_16615	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
NG829_16630	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
NG829_16635	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
NG829_16655	COG0521	Mo-molybdopterin cofactor biosynthetic process
NG829_16670	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
NG829_16675	COG1295	ribonuclease BN
NG829_16695	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
NG829_16700	COG1404	Belongs to the peptidase S8 family
NG829_16710	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
NG829_16770	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
NG829_16770	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
NG829_16820	COG2890	protein-(glutamine-N5) methyltransferase activity
NG829_16830	COG3634	alkyl hydroperoxide reductase activity
NG829_16835	COG0583	DNA-binding transcription factor activity
NG829_16840	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
NG829_16845	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
NG829_16875	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
NG829_16885	COG2197	response regulator
NG829_16890	COG2205	protein histidine kinase activity
NG829_16890	COG5002	protein histidine kinase activity
NG829_16890	COG0784	Response regulator, receiver
NG829_16915	COG0697	spore germination
NG829_16970	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
NG829_16975	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
NG829_16985	COG2096	Adenosyltransferase
NG829_17000	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
NG829_17005	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
NG829_17015	COG2967	ApaG domain
NG829_17020	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
NG829_17055	COG1704	LemA family
NG829_17060	COG0861	Integral membrane protein TerC family
NG829_17065	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
NG829_17075	COG0642	Histidine kinase
NG829_17090	COG4181	ATPase activity
NG829_17095	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
NG829_17110	COG4771	TonB-dependent receptor
NG829_17120	COG0667	Aldo Keto reductase
NG829_17125	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
NG829_17140	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
NG829_17145	COG4106	trans-aconitate 2-methyltransferase activity
NG829_17195	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
NG829_17285	COG0840	transmembrane signaling receptor activity
NG829_17305	COG0366	Alpha amylase catalytic
NG829_17310	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
NG829_17320	COG0494	nUDIX hydrolase
NG829_17330	COG0653	protein targeting
NG829_17335	COG0739	heme binding
NG829_17350	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
NG829_17360	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
NG829_17365	COG1181	Belongs to the D-alanine--D-alanine ligase family
NG829_17370	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
NG829_17390	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
NG829_17405	COG3116	cell division
NG829_17450	COG1988	membrane-bound metal-dependent
NG829_17455	COG0277	FAD linked oxidase domain protein
NG829_17460	COG0745	RESPONSE REGULATOR receiver
NG829_17465	COG2205	protein histidine kinase activity
NG829_17470	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
NG829_17475	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
NG829_17480	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
NG829_17505	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
NG829_17510	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
NG829_17525	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
NG829_17525	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
NG829_17535	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
NG829_17555	COG0477	Major facilitator Superfamily
NG829_17560	COG0488	(ABC) transporter
NG829_17565	COG0242	peptide deformylase activity
NG829_17570	COG0457	Tetratricopeptide repeat
NG829_17575	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
NG829_17580	COG1215	transferase activity, transferring glycosyl groups
NG829_17585	COG1215	transferase activity, transferring glycosyl groups
NG829_17600	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
NG829_17645	COG2188	Transcriptional regulator
NG829_17655	COG1450	Type ii and iii secretion system protein
NG829_17670	COG3166	PFAM Fimbrial assembly family protein
NG829_17675	COG3156	type II secretion system protein K
NG829_17680	COG4795	General secretion pathway protein
NG829_17685	COG2165	general secretion pathway protein
NG829_17690	COG4970	Tfp pilus assembly protein FimT
NG829_17695	COG2165	general secretion pathway protein
NG829_17700	COG1459	type II secretion system
NG829_17705	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
NG829_17710	COG1404	Belongs to the peptidase S8 family
NG829_17715	COG5295	Hep Hag repeat protein
NG829_17720	COG0047	phosphoribosylformylglycinamidine synthase activity
NG829_17720	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
NG829_17725	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
NG829_17735	COG4974	Belongs to the 'phage' integrase family
NG829_17760	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
NG829_17770	COG0525	valine-tRNA ligase activity
NG829_17790	COG1183	phosphatidylcholine synthase activity
NG829_17800	COG0442	prolyl-tRNA aminoacylation
NG829_17815	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
NG829_17820	COG1127	ABC transporter
NG829_17825	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
NG829_17825	COG3218	ABC-type transport auxiliary lipoprotein component
NG829_17860	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
NG829_17895	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
NG829_17910	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
NG829_17920	COG0463	Glycosyl transferase, family 2
NG829_17935	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
NG829_17940	COG2226	methyltransferase
NG829_17955	COG0626	cystathionine gamma-synthase activity
NG829_17985	COG0625	glutathione transferase activity
NG829_17995	COG0513	Belongs to the DEAD box helicase family
NG829_18000	COG0720	synthase
NG829_18010	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
NG829_18015	COG1956	GAF domain-containing protein
NG829_18025	COG4206	TonB-dependent receptor
NG829_18030	COG0546	phosphoglycolate phosphatase activity
NG829_18035	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
NG829_18040	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
NG829_18055	COG0339	signal peptide processing
NG829_18060	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
NG829_18070	COG2217	Heavy metal translocating P-type atpase
NG829_18085	COG2132	Multicopper oxidase
NG829_18115	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
NG829_18125	COG1136	(ABC) transporter
NG829_18130	COG0577	efflux transmembrane transporter activity
NG829_18130	COG1136	(ABC) transporter
NG829_18135	COG0577	efflux transmembrane transporter activity
NG829_18140	COG0577	efflux transmembrane transporter activity
NG829_18150	COG1136	(ABC) transporter
NG829_18150	COG0577	efflux transmembrane transporter activity
NG829_18160	COG0577	efflux transmembrane transporter activity
NG829_18165	COG1136	(ABC) transporter
NG829_18165	COG0577	efflux transmembrane transporter activity
NG829_18170	COG0577	efflux transmembrane transporter activity
NG829_18170	COG1136	(ABC) transporter
NG829_18180	COG0577	efflux transmembrane transporter activity
NG829_18190	COG4191	Histidine kinase
NG829_18200	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
NG829_18215	COG0355	proton-transporting ATP synthase activity, rotational mechanism
NG829_18220	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
NG829_18230	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
NG829_18240	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
NG829_18250	COG0356	it plays a direct role in the translocation of protons across the membrane
NG829_18270	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
NG829_18275	COG0508	dehydrogenase complex catalyzes the overall conversion of
NG829_18315	COG0697	spore germination
NG829_18350	COG0657	acetylesterase activity
NG829_18375	COG3485	protocatechuate 3,4-dioxygenase
NG829_18400	COG1187	pseudouridine synthase activity
NG829_18450	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
NG829_18510	COG0842	Transport permease protein
NG829_18515	COG1131	(ABC) transporter
NG829_18530	COG0025	NhaP-type Na H and K H
NG829_18545	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
NG829_18550	COG1573	uracil-dna glycosylase
NG829_18560	COG3384	dioxygenase
NG829_18565	COG0583	DNA-binding transcription factor activity
NG829_18580	COG0667	Aldo Keto reductase
NG829_18590	COG0667	Aldo Keto reductase
NG829_18605	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
NG829_18610	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
NG829_18670	COG3275	phosphorelay sensor kinase activity
NG829_18680	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
NG829_18690	COG0531	amino acid
NG829_18710	COG5297	Belongs to the glycosyl hydrolase family 6
NG829_18710	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
NG829_18715	COG5297	Belongs to the glycosyl hydrolase family 6
NG829_18715	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
NG829_18720	COG0612	Peptidase, M16
NG829_18765	COG2207	Transcriptional regulator
NG829_18775	COG0598	Magnesium transport protein CorA
NG829_18780	COG1113	amino acid transport
NG829_18790	COG0697	spore germination
NG829_18810	COG0583	DNA-binding transcription factor activity
NG829_18830	COG2409	Drug exporters of the RND superfamily
NG829_18840	COG5520	Belongs to the glycosyl hydrolase 30 family
NG829_18850	COG3550	peptidyl-serine autophosphorylation
NG829_19005	COG2353	YceI-like domain
NG829_19010	COG0778	Nitroreductase
NG829_19030	COG0584	glycerophosphoryl diester phosphodiesterase
NG829_19045	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
NG829_19050	COG0477	Major facilitator Superfamily
NG829_19055	COG2814	Major facilitator Superfamily
NG829_19060	COG0583	DNA-binding transcription factor activity
NG829_19075	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
NG829_19085	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
NG829_19095	COG0459	protein refolding
NG829_19100	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
NG829_19105	COG2356	endonuclease I
NG829_19110	COG1324	tolerance protein
NG829_19115	COG4232	protein-disulfide reductase activity
NG829_19120	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
NG829_19130	COG3525	Glycosyl hydrolase, family 20, catalytic domain
NG829_19130	COG3291	Pkd domain containing protein
NG829_19135	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
NG829_19140	COG0511	ligase activity, forming carbon-carbon bonds
NG829_19150	COG0439	Biotin carboxylase
NG829_19170	COG2264	protein methyltransferase activity
NG829_19185	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
NG829_19190	COG4589	Belongs to the CDS family
NG829_19215	COG2453	phosphatase
NG829_19215	COG0671	phosphoesterase, PA-phosphatase related
NG829_19220	COG2267	carboxylic ester hydrolase activity
NG829_19225	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
NG829_19230	COG0138	bifunctional purine biosynthesis protein purh
NG829_19240	COG0151	Belongs to the GarS family
NG829_19255	COG1289	transmembrane transporter activity
NG829_19260	COG2814	Major facilitator Superfamily
NG829_19310	COG2816	NAD+ diphosphatase activity
NG829_19315	COG0316	Belongs to the HesB IscA family
NG829_19355	COG1051	belongs to the nudix hydrolase family
NG829_19370	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
NG829_19395	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
NG829_19400	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
NG829_19405	COG0730	response to heat
NG829_19410	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
NG829_19410	COG4124	Belongs to the glycosyl hydrolase 26 family
NG829_19420	COG0134	indole-3-glycerol-phosphate synthase activity
NG829_19425	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
NG829_19460	COG1597	lipid kinase activity
NG829_19470	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
NG829_19475	COG0484	heat shock protein binding
NG829_19510	COG2111	Na H antiporter
NG829_19510	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
NG829_19515	COG1006	Multisubunit Na H antiporter MnhC subunit
NG829_19520	COG0651	ATP synthesis coupled electron transport
NG829_19525	COG1863	multisubunit Na H antiporter MnhE subunit
NG829_19530	COG2212	antiporter activity
NG829_19535	COG1320	monovalent cation:proton antiporter activity
NG829_19540	COG0530	calcium, potassium:sodium antiporter activity
NG829_19545	COG0753	catalase activity
NG829_19600	COG5001	Diguanylate cyclase
NG829_19600	COG2203	Gaf domain
NG829_19600	COG3706	GGDEF domain
NG829_19600	COG4251	negative regulation of phosphorylation
NG829_19605	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
NG829_19620	COG2197	response regulator
NG829_19625	COG4585	Histidine kinase
NG829_19635	COG1131	(ABC) transporter
NG829_19640	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NG829_19650	COG1136	(ABC) transporter
NG829_19655	COG0577	efflux transmembrane transporter activity
NG829_19675	COG0697	spore germination
NG829_19700	COG0180	Tryptophanyl-tRNA synthetase
NG829_19710	COG3237	CsbD-like
NG829_19725	COG0010	Belongs to the arginase family
NG829_19745	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
NG829_19790	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
NG829_19820	COG2084	Dehydrogenase
NG829_19825	COG1902	pentaerythritol trinitrate reductase activity
NG829_19840	COG2814	Major facilitator Superfamily
NG829_19845	COG0583	DNA-binding transcription factor activity
NG829_19860	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
NG829_19865	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
NG829_19890	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
NG829_19895	COG1764	response to oxidative stress
NG829_19900	COG1846	Transcriptional regulator
NG829_19910	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
NG829_19920	COG0697	spore germination
NG829_19925	COG0523	cobalamin synthesis protein
NG829_19955	COG1960	acyl-CoA dehydrogenase activity
NG829_19960	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
NG829_20000	COG0045	succinate-CoA ligase (ADP-forming) activity
NG829_20000	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
NG829_20000	COG1042	CoA-binding domain protein
NG829_20010	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
NG829_20015	COG3387	PFAM Glycoside hydrolase 15-related
NG829_20020	COG0745	RESPONSE REGULATOR receiver
NG829_20035	COG1404	Belongs to the peptidase S8 family
NG829_20045	COG3100	YcgL domain-containing protein
NG829_20050	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
NG829_20060	COG0463	Glycosyl transferase, family 2
NG829_20075	COG1028	Short-chain dehydrogenase reductase Sdr
NG829_20100	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
NG829_20115	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
NG829_20150	COG1294	oxidase, subunit
NG829_20155	COG1271	oxidase subunit
NG829_20175	COG0408	coproporphyrinogen oxidase activity
NG829_20195	COG0589	response to stress
NG829_20215	COG3568	Endonuclease Exonuclease Phosphatase
NG829_20220	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
NG829_20225	COG0392	lysyltransferase activity
NG829_20245	COG0210	DNA helicase
NG829_20250	COG0583	DNA-binding transcription factor activity
NG829_20255	COG0477	Major facilitator Superfamily
NG829_20265	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
NG829_20270	COG0267	Belongs to the bacterial ribosomal protein bL33 family
NG829_20275	COG0227	Belongs to the bacterial ribosomal protein bL28 family
NG829_20315	COG0463	Glycosyl transferase, family 2
NG829_20340	COG1192	Involved in chromosome partitioning
NG829_20345	COG0357	Ribosomal RNA small subunit methyltransferase G
NG829_20355	COG2091	lysine biosynthetic process via aminoadipic acid
NG829_20380	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
NG829_20395	COG1011	Hydrolase
NG829_20400	COG4104	PAAR repeat-containing protein
NG829_20405	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
NG829_20450	COG0457	Tetratricopeptide repeat
NG829_20455	COG0784	Response regulator, receiver
NG829_20455	COG2198	Histidine kinase
NG829_20455	COG2205	protein histidine kinase activity
NG829_20460	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
NG829_20465	COG3265	gluconokinase activity
NG829_20485	COG3209	COG3209 Rhs family protein
NG829_20505	COG2911	Protein conserved in bacteria
NG829_20510	COG0729	surface antigen
NG829_20525	COG3132	Protein of unknown function, DUF480
NG829_20555	COG3210	domain, Protein
NG829_20555	COG3210	domain, Protein
NG829_20555	COG3210	domain, Protein
NG829_20570	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
NG829_20575	COG0284	orotidine-5'-phosphate decarboxylase activity
NG829_20605	COG2937	Belongs to the GPAT DAPAT family
NG829_20650	COG3046	protein related to deoxyribodipyrimidine photolyase
NG829_20680	COG0037	tRNA processing
NG829_20695	COG0840	transmembrane signaling receptor activity
NG829_20705	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
NG829_20725	COG0805	protein transport
NG829_20735	COG0518	GMP synthase (glutamine-hydrolyzing) activity
NG829_20735	COG0519	Catalyzes the synthesis of GMP from XMP
NG829_20740	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
NG829_20755	COG0210	DNA helicase
NG829_20770	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
NG829_20775	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
NG829_20780	COG3209	COG3209 Rhs family protein
NG829_20815	COG1119	ATPase activity
NG829_20820	COG1733	regulation of RNA biosynthetic process
NG829_20840	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
NG829_20875	COG0594	ribonuclease P activity