SB85_00010 SM00382 ATPases associated with a variety of cellular activities SB85_00050 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). SB85_00050 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SB85_00105 SM00382 ATPases associated with a variety of cellular activities SB85_00105 SM01086 C-terminal, D2-small domain, of ClpB protein SB85_00210 SM00382 ATPases associated with a variety of cellular activities SB85_00245 SM00834 Putative regulatory protein SB85_00295 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SB85_00305 SM00382 ATPases associated with a variety of cellular activities SB85_00380 SM00341 Helicase and RNase D C-terminal SB85_00380 SM00487 DEAD-like helicases superfamily SB85_00380 SM00490 helicase superfamily c-terminal domain SB85_00380 SM00956 SB85_00380 SB85_00430 SM00954 Region found in RelA / SpoT proteins SB85_00455 SM00491 SB85_00455 SB85_00485 SM00448 cheY-homologous receiver domain SB85_00490 SM00448 cheY-homologous receiver domain SB85_00495 SM00260 Two component signalling adaptor domain SB85_00500 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). SB85_00505 SM00073 Histidine Phosphotransfer domain SB85_00505 SM00260 Two component signalling adaptor domain SB85_00505 SM00387 Histidine kinase-like ATPases SB85_00505 SM00448 cheY-homologous receiver domain SB85_00505 SM01231 SB85_00505 SB85_00515 SM00260 Two component signalling adaptor domain SB85_00540 SM00812 Alpha-L-fucosidase SB85_00595 SM00829 Enoylreductase SB85_00645 SM00487 DEAD-like helicases superfamily SB85_00645 SM00490 helicase superfamily c-terminal domain SB85_00665 SM01149 SB85_00665 SB85_00695 SM00758 SB85_00695 SB85_00695 SM01217 SB85_00695 SB85_00710 SM00636 SB85_00710 SB85_00715 SM00812 Alpha-L-fucosidase SB85_00765 SM00244 prohibitin homologues SB85_00860 SM00116 Domain in cystathionine beta-synthase and other proteins. SB85_00905 SM00267 diguanylate cyclase SB85_00960 SM00670 Large family of predicted nucleotide-binding domains SB85_00975 SM01130 SB85_00975 SB85_01000 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain SB85_01030 SM00758 SB85_01030 SB85_01105 SM00052 Putative diguanylate phosphodiesterase SB85_01105 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SB85_01105 SM00267 diguanylate cyclase SB85_01110 SM00448 cheY-homologous receiver domain SB85_01115 SM00387 Histidine kinase-like ATPases SB85_01125 SM00014 Acid phosphatase homologues SB85_01205 SM00100 Cyclic nucleotide-monophosphate binding domain SB85_01205 SM00419 helix_turn_helix, cAMP Regulatory protein SB85_01215 SM00100 Cyclic nucleotide-monophosphate binding domain SB85_01215 SM00419 helix_turn_helix, cAMP Regulatory protein SB85_01295 SM01007 Class II Aldolase and Adducin N-terminal domain SB85_01340 SM00841 Elongation factor P, C-terminal SB85_01340 SM01185 SB85_01340 SB85_01365 SM00899 SB85_01365 SB85_01400 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain SB85_01410 SM00851 MGS-like domain SB85_01410 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SB85_01430 SM00382 ATPases associated with a variety of cellular activities SB85_01445 SM00736 Dystroglycan-type cadherin-like domains. SB85_01455 SM00850 LytTr DNA-binding domain SB85_01460 SM00937 SB85_01460 SB85_01470 SM00448 cheY-homologous receiver domain SB85_01470 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SB85_01495 SM00966 SpoVT / AbrB like domain SB85_01510 SM00052 Putative diguanylate phosphodiesterase SB85_01510 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SB85_01510 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SB85_01510 SM00091 PAS domain SB85_01510 SM00267 diguanylate cyclase SB85_01515 SM00448 cheY-homologous receiver domain SB85_01535 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). SB85_01535 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SB85_01545 SM00260 Two component signalling adaptor domain SB85_01555 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). SB85_01565 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). SB85_01565 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SB85_01570 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). SB85_01570 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SB85_01575 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). SB85_01575 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SB85_01580 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). SB85_01590 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). SB85_01590 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SB85_01595 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). SB85_01595 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SB85_01605 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). SB85_01605 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SB85_01610 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). SB85_01610 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SB85_01615 SM00073 Histidine Phosphotransfer domain SB85_01615 SM00260 Two component signalling adaptor domain SB85_01615 SM00387 Histidine kinase-like ATPases SB85_01615 SM01231 SB85_01615 SB85_01620 SM00448 cheY-homologous receiver domain SB85_01655 SM00073 Histidine Phosphotransfer domain SB85_01655 SM00260 Two component signalling adaptor domain SB85_01655 SM00387 Histidine kinase-like ATPases SB85_01655 SM01231 SB85_01655 SB85_01665 SM00448 cheY-homologous receiver domain SB85_01700 SM00267 diguanylate cyclase SB85_01785 SM00822 SB85_01785 SB85_01810 SM00382 ATPases associated with a variety of cellular activities SB85_01815 SM00448 cheY-homologous receiver domain SB85_01825 SM00421 helix_turn_helix, Lux Regulon SB85_01825 SM00448 cheY-homologous receiver domain SB85_01920 SM00260 Two component signalling adaptor domain SB85_01920 SM00448 cheY-homologous receiver domain SB85_01925 SM00858 SB85_01925 SB85_01940 SM00387 Histidine kinase-like ATPases SB85_01945 SM00052 Putative diguanylate phosphodiesterase SB85_01945 SM00267 diguanylate cyclase SB85_01945 SM00448 cheY-homologous receiver domain SB85_01950 SM00091 PAS domain SB85_01950 SM00387 Histidine kinase-like ATPases SB85_01955 SM00052 Putative diguanylate phosphodiesterase SB85_01955 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SB85_01955 SM00091 PAS domain SB85_01955 SM00267 diguanylate cyclase SB85_01965 SM00382 ATPases associated with a variety of cellular activities SB85_01980 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). SB85_02010 SM00382 ATPases associated with a variety of cellular activities SB85_02010 SM01086 C-terminal, D2-small domain, of ClpB protein SB85_02015 SM00316 Ribosomal protein S1-like RNA-binding domain SB85_02050 SM00382 ATPases associated with a variety of cellular activities SB85_02050 SM00843 SB85_02050 SB85_02070 SM00382 ATPases associated with a variety of cellular activities SB85_02110 SM00448 cheY-homologous receiver domain SB85_02245 SM00729 Elongator protein 3, MiaB family, Radical SAM SB85_02265 SM00729 Elongator protein 3, MiaB family, Radical SAM SB85_02275 SM00382 ATPases associated with a variety of cellular activities SB85_02285 SM00155 Phospholipase D. Active site motifs. SB85_02300 SM00382 ATPases associated with a variety of cellular activities SB85_02455 SM00327 von Willebrand factor (vWF) type A domain SB85_02485 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SB85_02485 SM00387 Histidine kinase-like ATPases SB85_02485 SM00388 His Kinase A (phosphoacceptor) domain SB85_02490 SM00448 cheY-homologous receiver domain SB85_02490 SM00862 Transcriptional regulatory protein, C terminal SB85_02575 SM00448 cheY-homologous receiver domain SB85_02580 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SB85_02580 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SB85_02580 SM00091 PAS domain SB85_02580 SM00387 Histidine kinase-like ATPases SB85_02580 SM00388 His Kinase A (phosphoacceptor) domain SB85_02580 SM00448 cheY-homologous receiver domain SB85_02585 SM00316 Ribosomal protein S1-like RNA-binding domain SB85_02585 SM00732 Likely ribonuclease with RNase H fold. SB85_02590 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SB85_02590 SM00091 PAS domain SB85_02590 SM00387 Histidine kinase-like ATPases SB85_02590 SM00388 His Kinase A (phosphoacceptor) domain SB85_02590 SM00448 cheY-homologous receiver domain SB85_02665 SM00479 SB85_02665 SB85_02675 SM00529 Helix-turn-helix diphteria tox regulatory element SB85_02695 SM00342 helix_turn_helix, arabinose operon control protein SB85_02765 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor SB85_02780 SM00116 Domain in cystathionine beta-synthase and other proteins. SB85_02780 SM01240 SB85_02780 SB85_02805 SM00450 Rhodanese Homology Domain SB85_02820 SM00382 ATPases associated with a variety of cellular activities SB85_02825 SM00564 beta-propeller repeat SB85_02840 SM00028 Tetratricopeptide repeats SB85_02850 SM00562 SB85_02850 SB85_02895 SM00411 bacterial (prokaryotic) histone like domain SB85_02900 SM00316 Ribosomal protein S1-like RNA-binding domain SB85_02990 SM00363 S4 RNA-binding domain SB85_03000 SM00421 helix_turn_helix, Lux Regulon SB85_03000 SM00448 cheY-homologous receiver domain SB85_03085 SM00830 Chorismate mutase type II SB85_03105 SM00240 Forkhead associated domain SB85_03135 SM00822 SB85_03135 SB85_03140 SM00345 helix_turn_helix gluconate operon transcriptional repressor SB85_03140 SM00866 SB85_03140 SB85_03200 SM00564 beta-propeller repeat SB85_03205 SM00434 DNA Topoisomerase IV SB85_03230 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SB85_03230 SM00292 breast cancer carboxy-terminal domain SB85_03230 SM00532 Ligase N family SB85_03290 SM00947 Carbonic anhydrase SB85_03315 SM00479 SB85_03315 SB85_03385 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor SB85_03395 SM01018 B12 binding domain SB85_03425 SM00984 UDP binding domain SB85_03445 SM00345 helix_turn_helix gluconate operon transcriptional repressor SB85_03450 SM00382 ATPases associated with a variety of cellular activities SB85_03475 SM00345 helix_turn_helix gluconate operon transcriptional repressor SB85_03495 SM01091 Transporter associated domain SB85_03510 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. SB85_03520 SM00861 Transketolase, pyrimidine binding domain SB85_03540 SM00052 Putative diguanylate phosphodiesterase SB85_03540 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SB85_03540 SM00267 diguanylate cyclase SB85_03560 SM00382 ATPases associated with a variety of cellular activities SB85_03580 SM00271 DnaJ molecular chaperone homology domain SB85_03645 SM00267 diguanylate cyclase SB85_03655 SM00822 SB85_03655 SB85_03745 SM00052 Putative diguanylate phosphodiesterase SB85_03765 SM00357 Cold shock protein domain SB85_03820 SM00382 ATPases associated with a variety of cellular activities SB85_03865 SM00347 helix_turn_helix multiple antibiotic resistance protein SB85_03895 SM00631 SB85_03895 SB85_03900 SM01217 SB85_03900 SB85_03925 SM00382 ATPases associated with a variety of cellular activities SB85_03930 SM00382 ATPases associated with a variety of cellular activities SB85_03930 SM00487 DEAD-like helicases superfamily SB85_03930 SM00490 helicase superfamily c-terminal domain SB85_03970 SM00357 Cold shock protein domain SB85_03975 SM01322 SB85_03975 SB85_03985 SM00052 Putative diguanylate phosphodiesterase SB85_03985 SM00091 PAS domain SB85_03985 SM00267 diguanylate cyclase SB85_04000 SM00822 SB85_04000 SB85_04070 SM00347 helix_turn_helix multiple antibiotic resistance protein SB85_04115 SM00387 Histidine kinase-like ATPases SB85_04120 SM00421 helix_turn_helix, Lux Regulon SB85_04120 SM00448 cheY-homologous receiver domain SB85_04130 SM00507 HNH nucleases SB85_04210 SM00422 helix_turn_helix, mercury resistance SB85_04215 SM00411 bacterial (prokaryotic) histone like domain SB85_04220 SM00873 B3/4 domain SB85_04220 SM00874 tRNA synthetase B5 domain SB85_04220 SM00896 Ferredoxin-fold anticodon binding domain SB85_04245 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain SB85_04250 SM00354 helix_turn _helix lactose operon repressor SB85_04255 SM00642 Alpha-amylase domain SB85_04280 SM00642 Alpha-amylase domain SB85_04395 SM00487 DEAD-like helicases superfamily SB85_04395 SM00490 helicase superfamily c-terminal domain SB85_04485 SM01001 AIR carboxylase SB85_04550 SM00729 Elongator protein 3, MiaB family, Radical SAM SB85_04555 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor SB85_04595 SM00116 Domain in cystathionine beta-synthase and other proteins. SB85_04595 SM01091 Transporter associated domain SB85_04625 SM00382 ATPases associated with a variety of cellular activities SB85_04665 SM01230 SB85_04665 SB85_04675 SM01230 SB85_04675 SB85_04685 SM00267 diguanylate cyclase SB85_04685 SM00448 cheY-homologous receiver domain SB85_04730 SM00530 Helix-turn-helix XRE-family like proteins SB85_04740 SM01002 Alanine dehydrogenase/PNT, C-terminal domain SB85_04740 SM01003 Alanine dehydrogenase/PNT, N-terminal domain SB85_04765 SM00448 cheY-homologous receiver domain SB85_04765 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SB85_04770 SM00981 SB85_04770 SB85_04775 SM00382 ATPases associated with a variety of cellular activities SB85_04795 SM00644 SB85_04795 SB85_04805 SM00450 Rhodanese Homology Domain SB85_04830 SM00478 endonuclease III SB85_04830 SM00525 SB85_04830 SB85_04860 SM00382 ATPases associated with a variety of cellular activities SB85_04885 SM00479 SB85_04885 SB85_04900 SM00267 diguanylate cyclase SB85_04905 SM00967 RNA 2'-O ribose methyltransferase substrate binding SB85_04915 SM00316 Ribosomal protein S1-like RNA-binding domain SB85_04915 SM00357 Cold shock protein domain SB85_04915 SM00955 SB85_04915 SB85_04940 SM00530 Helix-turn-helix XRE-family like proteins SB85_04965 SM00347 helix_turn_helix multiple antibiotic resistance protein SB85_04970 SM00342 helix_turn_helix, arabinose operon control protein SB85_04975 SM00434 DNA Topoisomerase IV SB85_05005 SM01007 Class II Aldolase and Adducin N-terminal domain SB85_05035 SM00710 Parallel beta-helix repeats SB85_05035 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses SB85_05040 SM00267 diguanylate cyclase SB85_05045 SM00267 diguanylate cyclase SB85_05055 SM01172 SB85_05055 SB85_05085 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SB85_05095 SM00972 Spore Coat Protein U domain SB85_05110 SM00972 Spore Coat Protein U domain SB85_05135 SM00267 diguanylate cyclase SB85_05165 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SB85_05270 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor SB85_05300 SM00344 helix_turn_helix ASNC type SB85_05340 SM00448 cheY-homologous receiver domain SB85_05340 SM00862 Transcriptional regulatory protein, C terminal SB85_05345 SM00387 Histidine kinase-like ATPases SB85_05345 SM00388 His Kinase A (phosphoacceptor) domain SB85_05350 SM00849 Metallo-beta-lactamase superfamily SB85_05390 SM00387 Histidine kinase-like ATPases SB85_05470 SM01130 SB85_05470 SB85_05495 SM00342 helix_turn_helix, arabinose operon control protein SB85_05500 SM00382 ATPases associated with a variety of cellular activities SB85_05500 SM00962 SRP54-type protein, GTPase domain SB85_05500 SM00963 SRP54-type protein, helical bundle domain SB85_05505 SM00478 endonuclease III SB85_05530 SM00474 3'-5' exonuclease SB85_05535 SM00528 Domain in histone-like proteins of HNS family SB85_05550 SM00260 Two component signalling adaptor domain SB85_05555 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). SB85_05560 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). SB85_05560 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SB85_05575 SM00052 Putative diguanylate phosphodiesterase SB85_05575 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SB85_05580 SM00316 Ribosomal protein S1-like RNA-binding domain SB85_05580 SM00322 K homology RNA-binding domain SB85_05585 SM01387 SB85_05585 SB85_05605 SM00316 Ribosomal protein S1-like RNA-binding domain SB85_05605 SM00322 K homology RNA-binding domain SB85_05655 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region SB85_05660 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region SB85_05705 SM00822 SB85_05705 SB85_05785 SM00859 Semialdehyde dehydrogenase, NAD binding domain SB85_05815 SM00257 Lysin motif SB85_05850 SM00729 Elongator protein 3, MiaB family, Radical SAM SB85_05920 SM01160 SB85_05920 SB85_05985 SM00098 Alkaline phosphatase homologues SB85_06010 SM01351 SB85_06010 SB85_06055 SM00316 Ribosomal protein S1-like RNA-binding domain SB85_06290 SM00028 Tetratricopeptide repeats SB85_06335 SM00052 Putative diguanylate phosphodiesterase SB85_06375 SM00564 beta-propeller repeat SB85_06425 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SB85_06475 SM00487 DEAD-like helicases superfamily SB85_06475 SM00490 helicase superfamily c-terminal domain SB85_06495 SM00357 Cold shock protein domain SB85_06520 SM01118 SB85_06520 SB85_06530 SM00448 cheY-homologous receiver domain SB85_06550 SM00358 Double-stranded RNA binding motif SB85_06550 SM00535 Ribonuclease III family SB85_06565 SM00838 Elongation factor G C-terminus SB85_06570 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SB85_06625 SM00812 Alpha-L-fucosidase SB85_06630 SM00533 DNA-binding domain of DNA mismatch repair MUTS family SB85_06630 SM00534 ATPase domain of DNA mismatch repair MUTS family SB85_06645 SM00382 ATPases associated with a variety of cellular activities SB85_06645 SM01086 C-terminal, D2-small domain, of ClpB protein SB85_06655 SM00363 S4 RNA-binding domain SB85_06705 SM00382 ATPases associated with a variety of cellular activities SB85_06705 SM00962 SRP54-type protein, GTPase domain SB85_06705 SM00963 SRP54-type protein, helical bundle domain SB85_06725 SM00813 Alpha-L-arabinofuranosidase C-terminus SB85_06740 SM00838 Elongation factor G C-terminus SB85_06740 SM00889 Elongation factor G, domain IV SB85_06775 SM00382 ATPases associated with a variety of cellular activities SB85_06820 SM00965 Secretin and TonB N terminus short domain SB85_06830 SM00915 Jacalin-like lectin domain SB85_06845 SM00382 ATPases associated with a variety of cellular activities SB85_06915 SM00904 Riboflavin kinase SB85_06975 SM00054 EF-hand, calcium binding motif SB85_06990 SM00960 Roadblock/LC7 domain SB85_07030 SM00244 prohibitin homologues SB85_07085 SM00421 helix_turn_helix, Lux Regulon SB85_07085 SM00448 cheY-homologous receiver domain SB85_07120 SM00387 Histidine kinase-like ATPases SB85_07120 SM00388 His Kinase A (phosphoacceptor) domain SB85_07125 SM00448 cheY-homologous receiver domain SB85_07125 SM00862 Transcriptional regulatory protein, C terminal SB85_07165 SM01060 SB85_07165 SB85_07230 SM00487 DEAD-like helicases superfamily SB85_07280 SM00788 Adenylosuccinate synthetase SB85_07290 SM00244 prohibitin homologues SB85_07295 SM00244 prohibitin homologues SB85_07300 SM00829 Enoylreductase SB85_07305 SM00448 cheY-homologous receiver domain SB85_07310 SM00271 DnaJ molecular chaperone homology domain SB85_07340 SM00387 Histidine kinase-like ATPases SB85_07355 SM00382 ATPases associated with a variety of cellular activities SB85_07380 SM01359 SB85_07380 SB85_07380 SM01360 SB85_07380 SB85_07435 SM00530 Helix-turn-helix XRE-family like proteins SB85_07460 SM00481 DNA polymerase alpha chain like domain SB85_07465 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain SB85_07465 SM01232 SB85_07465 SB85_07510 SM00825 Beta-ketoacyl synthase SB85_07520 SM00822 SB85_07520 SB85_07525 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. SB85_07565 SM00382 ATPases associated with a variety of cellular activities SB85_07575 SM00460 Transglutaminase/protease-like homologues SB85_07590 SM00493 SB85_07590 SB85_07600 SM00382 ATPases associated with a variety of cellular activities SB85_07630 SM00729 Elongator protein 3, MiaB family, Radical SAM SB85_07665 SM00331 Sigma factor PP2C-like phosphatases SB85_07665 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain SB85_07670 SM00479 SB85_07670 SB85_07685 SM00849 Metallo-beta-lactamase superfamily SB85_07715 SM00411 bacterial (prokaryotic) histone like domain SB85_07720 SM00382 ATPases associated with a variety of cellular activities SB85_07720 SM00464 Found in ATP-dependent protease La (LON) SB85_07725 SM00382 ATPases associated with a variety of cellular activities SB85_07725 SM00994 ClpX C4-type zinc finger SB85_07725 SM01086 C-terminal, D2-small domain, of ClpB protein SB85_07775 SM01329 SB85_07775 SB85_07795 SM00448 cheY-homologous receiver domain SB85_07795 SM00862 Transcriptional regulatory protein, C terminal SB85_07800 SM00387 Histidine kinase-like ATPases SB85_07800 SM00388 His Kinase A (phosphoacceptor) domain SB85_07820 SM00014 Acid phosphatase homologues SB85_07870 SM00855 Phosphoglycerate mutase family SB85_07880 SM00829 Enoylreductase SB85_07890 SM00382 ATPases associated with a variety of cellular activities SB85_07920 SM00363 S4 RNA-binding domain SB85_07955 SM00829 Enoylreductase SB85_08045 SM00838 Elongation factor G C-terminus SB85_08055 SM00458 Ricin-type beta-trefoil SB85_08090 SM00662 RNA polymerases D SB85_08095 SM00363 S4 RNA-binding domain SB85_08095 SM01390 SB85_08095 SB85_08155 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. SB85_08160 SM01374 SB85_08160 SB85_08180 SM00322 K homology RNA-binding domain SB85_08195 SM01382 SB85_08195 SB85_08195 SM01383 SB85_08195 SB85_08215 SM01403 SB85_08215 SB85_08225 SM00838 Elongation factor G C-terminus SB85_08225 SM00889 Elongation factor G, domain IV SB85_08240 SM00663 RNA polymerase I subunit A N-terminus SB85_08265 SM00649 Ribosomal protein L11/L12 SB85_08270 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. SB85_08270 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. SB85_08320 SM01400 SB85_08320 SB85_08340 SM00028 Tetratricopeptide repeats SB85_08350 SM00937 SB85_08350 SB85_08360 SM00028 Tetratricopeptide repeats SB85_08370 SM00852 Probable molybdopterin binding domain SB85_08375 SM00530 Helix-turn-helix XRE-family like proteins SB85_08465 SM01002 Alanine dehydrogenase/PNT, C-terminal domain SB85_08465 SM01003 Alanine dehydrogenase/PNT, N-terminal domain SB85_08485 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs SB85_08485 SM00475 5'-3' exonuclease SB85_08510 SM00460 Transglutaminase/protease-like homologues SB85_08585 SM00421 helix_turn_helix, Lux Regulon SB85_08590 SM00387 Histidine kinase-like ATPases SB85_08590 SM00388 His Kinase A (phosphoacceptor) domain SB85_08590 SM00448 cheY-homologous receiver domain SB85_08595 SM00448 cheY-homologous receiver domain SB85_08620 SM00965 Secretin and TonB N terminus short domain SB85_08710 SM00650 Ribosomal RNA adenine dimethylases SB85_08770 SM00387 Histidine kinase-like ATPases SB85_08770 SM00388 His Kinase A (phosphoacceptor) domain SB85_08775 SM00448 cheY-homologous receiver domain SB85_08775 SM00862 Transcriptional regulatory protein, C terminal SB85_08785 SM00382 ATPases associated with a variety of cellular activities SB85_08865 SM00028 Tetratricopeptide repeats SB85_08865 SM00091 PAS domain SB85_08875 SM00563 Phosphate acyltransferases SB85_08925 SM00996 S-adenosyl-L-homocysteine hydrolase SB85_08925 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain SB85_08960 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). SB85_08960 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SB85_08975 SM00642 Alpha-amylase domain SB85_09000 SM00957 SecA DEAD-like domain SB85_09000 SM00958 SecA preprotein cross-linking domain SB85_09020 SM00864 Tubulin/FtsZ family, GTPase domain SB85_09020 SM00865 Tubulin/FtsZ family, C-terminal domain SB85_09025 SM00842 Cell division protein FtsA SB85_09130 SM00448 cheY-homologous receiver domain SB85_09130 SM00862 Transcriptional regulatory protein, C terminal SB85_09135 SM00387 Histidine kinase-like ATPases SB85_09135 SM00388 His Kinase A (phosphoacceptor) domain SB85_09165 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain SB85_09315 SM00028 Tetratricopeptide repeats SB85_09395 SM00345 helix_turn_helix gluconate operon transcriptional repressor SB85_09395 SM00866 SB85_09395 SB85_09455 SM00382 ATPases associated with a variety of cellular activities SB85_09470 SM01211 SB85_09470 SB85_09540 SM00656 SB85_09540 SB85_09570 SM00528 Domain in histone-like proteins of HNS family SB85_09585 SM00382 ATPases associated with a variety of cellular activities SB85_09615 SM00882 Coenzyme A transferase SB85_09620 SM00882 Coenzyme A transferase SB85_09655 SM00893 Electron transfer flavoprotein domain SB85_09660 SM00893 Electron transfer flavoprotein domain SB85_09685 SM00382 ATPases associated with a variety of cellular activities SB85_09695 SM00984 UDP binding domain SB85_09755 SM00116 Domain in cystathionine beta-synthase and other proteins. SB85_09790 SM00487 DEAD-like helicases superfamily SB85_09790 SM00490 helicase superfamily c-terminal domain SB85_09840 SM00825 Beta-ketoacyl synthase SB85_09870 SM00422 helix_turn_helix, mercury resistance SB85_09910 SM00382 ATPases associated with a variety of cellular activities SB85_09970 SM00382 ATPases associated with a variety of cellular activities SB85_09970 SM00448 cheY-homologous receiver domain SB85_09975 SM00387 Histidine kinase-like ATPases SB85_09995 SM00830 Chorismate mutase type II SB85_10005 SM00382 ATPases associated with a variety of cellular activities SB85_10070 SM00986 Uracil DNA glycosylase superfamily SB85_10070 SM00987 UreE urease accessory protein, C-terminal domain SB85_10095 SM00382 ATPases associated with a variety of cellular activities SB85_10095 SM00930 SB85_10095 SB85_10125 SM00829 Enoylreductase SB85_10140 SM00822 SB85_10140 SB85_10170 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain SB85_10210 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SB85_10210 SM00091 PAS domain SB85_10210 SM00387 Histidine kinase-like ATPases SB85_10210 SM00388 His Kinase A (phosphoacceptor) domain SB85_10210 SM00448 cheY-homologous receiver domain SB85_10225 SM01005 Alanine racemase, C-terminal domain SB85_10235 SM00344 helix_turn_helix ASNC type SB85_10295 SM00382 ATPases associated with a variety of cellular activities SB85_10325 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. SB85_10330 SM00986 Uracil DNA glycosylase superfamily SB85_10330 SM00987 UreE urease accessory protein, C-terminal domain SB85_10335 SM00729 Elongator protein 3, MiaB family, Radical SAM SB85_10395 SM00849 Metallo-beta-lactamase superfamily SB85_10410 SM00267 diguanylate cyclase SB85_10445 SM00448 cheY-homologous receiver domain SB85_10445 SM00850 LytTr DNA-binding domain SB85_10490 SM00637 SB85_10490 SB85_10495 SM00637 SB85_10495 SB85_10510 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SB85_10530 SM00062 Bacterial periplasmic substrate-binding proteins SB85_10540 SM00342 helix_turn_helix, arabinose operon control protein SB85_10735 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SB85_10735 SM00331 Sigma factor PP2C-like phosphatases SB85_10760 SM00867 YceI-like domain SB85_10775 SM00944 Pro-kumamolisin, activation domain SB85_10865 SM00883 Chaperonin 10 Kd subunit SB85_10915 SM00878 Biotin carboxylase C-terminal domain SB85_10935 SM00530 Helix-turn-helix XRE-family like proteins SB85_10955 SM00563 Phosphate acyltransferases SB85_10975 SM00195 Dual specificity phosphatase, catalytic domain SB85_10990 SM00798 AICARFT/IMPCHase bienzyme SB85_10990 SM00851 MGS-like domain SB85_11005 SM00986 Uracil DNA glycosylase superfamily SB85_11005 SM00987 UreE urease accessory protein, C-terminal domain SB85_11030 SM00563 Phosphate acyltransferases SB85_11090 SM00052 Putative diguanylate phosphodiesterase SB85_11090 SM00267 diguanylate cyclase SB85_11090 SM00448 cheY-homologous receiver domain SB85_11095 SM00073 Histidine Phosphotransfer domain SB85_11095 SM00387 Histidine kinase-like ATPases SB85_11095 SM00388 His Kinase A (phosphoacceptor) domain SB85_11095 SM00448 cheY-homologous receiver domain SB85_11155 SM00100 Cyclic nucleotide-monophosphate binding domain SB85_11155 SM00419 helix_turn_helix, cAMP Regulatory protein SB85_11210 SM00046 Diacylglycerol kinase catalytic domain (presumed) SB85_11225 SM00271 DnaJ molecular chaperone homology domain SB85_11300 SM01060 SB85_11300 SB85_11315 SM00267 diguanylate cyclase SB85_11320 SM00421 helix_turn_helix, Lux Regulon SB85_11320 SM00448 cheY-homologous receiver domain SB85_11335 SM00382 ATPases associated with a variety of cellular activities SB85_11350 SM00382 ATPases associated with a variety of cellular activities SB85_11390 SM00849 Metallo-beta-lactamase superfamily SB85_11470 SM00387 Histidine kinase-like ATPases SB85_11475 SM00448 cheY-homologous receiver domain SB85_11475 SM00862 Transcriptional regulatory protein, C terminal SB85_11520 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SB85_11520 SM00387 Histidine kinase-like ATPases SB85_11520 SM00388 His Kinase A (phosphoacceptor) domain SB85_11525 SM00448 cheY-homologous receiver domain SB85_11525 SM00862 Transcriptional regulatory protein, C terminal SB85_11575 SM00448 cheY-homologous receiver domain SB85_11575 SM00862 Transcriptional regulatory protein, C terminal SB85_11580 SM00387 Histidine kinase-like ATPases SB85_11640 SM00448 cheY-homologous receiver domain SB85_11640 SM00862 Transcriptional regulatory protein, C terminal SB85_11670 SM00347 helix_turn_helix multiple antibiotic resistance protein SB85_11695 SM00833 Cobalamin synthesis protein cobW C-terminal domain SB85_11735 SM00878 Biotin carboxylase C-terminal domain SB85_11770 SM00881 CoA binding domain SB85_11790 SM00448 cheY-homologous receiver domain SB85_11790 SM00862 Transcriptional regulatory protein, C terminal SB85_11795 SM00387 Histidine kinase-like ATPases SB85_11795 SM00388 His Kinase A (phosphoacceptor) domain SB85_11810 SM00248 ankyrin repeats SB85_11820 SM00825 Beta-ketoacyl synthase SB85_11845 SM00822 SB85_11845 SB85_11955 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family SB85_11975 SM00354 helix_turn _helix lactose operon repressor SB85_11990 SM00563 Phosphate acyltransferases SB85_12090 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). SB85_12090 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SB85_12135 SM00382 ATPases associated with a variety of cellular activities SB85_12145 SM00836 DALR anticodon binding domain SB85_12225 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs SB85_12225 SM00474 3'-5' exonuclease SB85_12225 SM00475 5'-3' exonuclease SB85_12225 SM00482 DNA polymerase A domain SB85_12240 SM01266 SB85_12240 SB85_12260 SM00155 Phospholipase D. Active site motifs. SB85_12300 SM00155 Phospholipase D. Active site motifs. SB85_12340 SM01321 SB85_12340 SB85_12345 SM01259 SB85_12345 SB85_12370 SM00470 ParB-like nuclease domain SB85_12450 SM00421 helix_turn_helix, Lux Regulon SB85_12450 SM00448 cheY-homologous receiver domain SB85_12490 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. SB85_12500 SM00028 Tetratricopeptide repeats SB85_12505 SM00387 Histidine kinase-like ATPases SB85_12505 SM00388 His Kinase A (phosphoacceptor) domain SB85_12505 SM00448 cheY-homologous receiver domain SB85_12510 SM00382 ATPases associated with a variety of cellular activities SB85_12520 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain SB85_12520 SM01232 SB85_12520 SB85_12535 SM00382 ATPases associated with a variety of cellular activities SB85_12565 SM00487 DEAD-like helicases superfamily SB85_12565 SM00490 helicase superfamily c-terminal domain SB85_12600 SM00028 Tetratricopeptide repeats SB85_12620 SM00382 ATPases associated with a variety of cellular activities SB85_12620 SM00760 Bacterial dnaA protein helix-turn-helix domain SB85_12625 SM00480 DNA polymerase III beta subunit SB85_12635 SM00382 ATPases associated with a variety of cellular activities SB85_12640 SM00387 Histidine kinase-like ATPases SB85_12640 SM00433 TopoisomeraseII SB85_12655 SM00028 Tetratricopeptide repeats SB85_12695 SM00155 Phospholipase D. Active site motifs. SB85_12700 SM00729 Elongator protein 3, MiaB family, Radical SAM SB85_12705 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. SB85_12745 SM00382 ATPases associated with a variety of cellular activities SB85_12765 SM00829 Enoylreductase SB85_12785 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen SB85_12795 SM00345 helix_turn_helix gluconate operon transcriptional repressor SB85_12795 SM00895 SB85_12795 SB85_12815 SM00421 helix_turn_helix, Lux Regulon SB85_12815 SM00448 cheY-homologous receiver domain SB85_12985 SM00267 diguanylate cyclase SB85_13020 SM00354 helix_turn _helix lactose operon repressor SB85_13065 SM00344 helix_turn_helix ASNC type SB85_13105 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). SB85_13105 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SB85_13110 SM00014 Acid phosphatase homologues SB85_13125 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase SB85_13160 SM00421 helix_turn_helix, Lux Regulon SB85_13160 SM00448 cheY-homologous receiver domain SB85_13165 SM00387 Histidine kinase-like ATPases SB85_13165 SM00388 His Kinase A (phosphoacceptor) domain SB85_13215 SM00382 ATPases associated with a variety of cellular activities SB85_13245 SM00237 Domains in Na-Ca exchangers and integrin-beta4 SB85_13245 SM00869 Autotransporter beta-domain SB85_13275 SM00530 Helix-turn-helix XRE-family like proteins SB85_13305 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). SB85_13305 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SB85_13365 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SB85_13495 SM00487 DEAD-like helicases superfamily SB85_13495 SM00490 helicase superfamily c-terminal domain SB85_13540 SM00060 Fibronectin type 3 domain SB85_13600 SM00382 ATPases associated with a variety of cellular activities SB85_13610 SM00855 Phosphoglycerate mutase family SB85_13615 SM00867 YceI-like domain SB85_13620 SM00155 Phospholipase D. Active site motifs. SB85_13630 SM00563 Phosphate acyltransferases SB85_13640 SM00028 Tetratricopeptide repeats SB85_13655 SM01230 SB85_13655 SB85_13665 SM00938 Nitrogen regulatory protein P-II SB85_13675 SM00387 Histidine kinase-like ATPases SB85_13675 SM00388 His Kinase A (phosphoacceptor) domain SB85_13680 SM00382 ATPases associated with a variety of cellular activities SB85_13680 SM00448 cheY-homologous receiver domain SB85_13740 SM00450 Rhodanese Homology Domain SB85_13865 SM00563 Phosphate acyltransferases SB85_13940 SM00100 Cyclic nucleotide-monophosphate binding domain SB85_13940 SM00267 diguanylate cyclase SB85_14050 SM00347 helix_turn_helix multiple antibiotic resistance protein SB85_14070 SM00342 helix_turn_helix, arabinose operon control protein SB85_14090 SM00345 helix_turn_helix gluconate operon transcriptional repressor SB85_14090 SM00895 SB85_14090 SB85_14100 SM00882 Coenzyme A transferase SB85_14105 SM00882 Coenzyme A transferase SB85_14125 SM00998 Adenylosuccinate lyase C-terminus SB85_14180 SM00487 DEAD-like helicases superfamily SB85_14180 SM00490 helicase superfamily c-terminal domain SB85_14180 SM00847 Helicase associated domain (HA2) Add an annotation SB85_14225 SM00240 Forkhead associated domain SB85_14235 SM00858 SB85_14235 SB85_14280 SM00382 ATPases associated with a variety of cellular activities SB85_14295 SM00530 Helix-turn-helix XRE-family like proteins SB85_14305 SM00382 ATPases associated with a variety of cellular activities SB85_14365 SM01004 Delta-aminolevulinic acid dehydratase SB85_14380 SM00477 DNA/RNA non-specific endonuclease SB85_14380 SM00892 DNA/RNA non-specific endonuclease SB85_14415 SM00491 SB85_14415 SB85_14425 SM01060 SB85_14425 SB85_14430 SM00248 ankyrin repeats SB85_14510 SM00824 Thioesterase SB85_14630 SM00382 ATPases associated with a variety of cellular activities SB85_14665 SM00710 Parallel beta-helix repeats SB85_14685 SM00564 beta-propeller repeat SB85_14705 SM00090 RIO-like kinase SB85_14715 SM01228 SB85_14715 SB85_14735 SM00644 SB85_14735 SB85_14775 SM00729 Elongator protein 3, MiaB family, Radical SAM SB85_14775 SM00876 Biotin and Thiamin Synthesis associated domain SB85_14800 SM00387 Histidine kinase-like ATPases SB85_14800 SM00388 His Kinase A (phosphoacceptor) domain SB85_14805 SM00448 cheY-homologous receiver domain SB85_14805 SM00862 Transcriptional regulatory protein, C terminal SB85_14815 SM00912 haemagglutination activity domain SB85_14825 SM00382 ATPases associated with a variety of cellular activities SB85_14835 SM00938 Nitrogen regulatory protein P-II SB85_14870 SM00448 cheY-homologous receiver domain SB85_14870 SM00850 LytTr DNA-binding domain SB85_14920 SM00822 SB85_14920 SB85_14930 SM00836 DALR anticodon binding domain SB85_14930 SM01016 Arginyl tRNA synthetase N terminal dom SB85_15020 SM00829 Enoylreductase SB85_15040 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SB85_15040 SM00245 tail specific protease SB85_15125 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SB85_15125 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). SB85_15145 SM00400 zinc finger SB85_15145 SM00493 SB85_15145 SB85_15145 SM00766 DNA primase DnaG DnaB-binding SB85_15170 SM00905 Dihydroneopterin aldolase SB85_15190 SM01217 SB85_15190 SB85_15230 SM00354 helix_turn _helix lactose operon repressor SB85_15245 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. SB85_15270 SM00354 helix_turn _helix lactose operon repressor SB85_15300 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain SB85_15320 SM00644 SB85_15320 SB85_15380 SM01150 SB85_15380 SB85_15415 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SB85_15420 SM00305 Hint (Hedgehog/Intein) domain C-terminal region SB85_15420 SM00306 Hint (Hedgehog/Intein) domain N-terminal region SB85_15445 SM00052 Putative diguanylate phosphodiesterase SB85_15445 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SB85_15465 SM00563 Phosphate acyltransferases SB85_15550 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain SB85_15565 SM00346 helix_turn_helix isocitrate lyase regulation SB85_15615 SM00965 Secretin and TonB N terminus short domain SB85_15625 SM00829 Enoylreductase SB85_15645 SM01120 SB85_15645 SB85_15660 SM00267 diguanylate cyclase SB85_15695 SM00487 DEAD-like helicases superfamily SB85_15695 SM00490 helicase superfamily c-terminal domain SB85_15710 SM00326 Src homology 3 domains SB85_15715 SM00861 Transketolase, pyrimidine binding domain SB85_15725 SM00237 Domains in Na-Ca exchangers and integrin-beta4 SB85_15745 SM00347 helix_turn_helix multiple antibiotic resistance protein SB85_15800 SM00257 Lysin motif SB85_15815 SM00420 helix_turn_helix, Deoxyribose operon repressor SB85_15815 SM01134 SB85_15815 SB85_15835 SM00776 SB85_15835 SB85_15875 SM00357 Cold shock protein domain SB85_15875 SM00382 ATPases associated with a variety of cellular activities SB85_15875 SM00959 Rho termination factor, N-terminal domain SB85_15890 SM00382 ATPases associated with a variety of cellular activities SB85_15900 SM00448 cheY-homologous receiver domain SB85_15905 SM00986 Uracil DNA glycosylase superfamily SB85_15905 SM00987 UreE urease accessory protein, C-terminal domain SB85_15930 SM00487 DEAD-like helicases superfamily SB85_15930 SM00490 helicase superfamily c-terminal domain SB85_15975 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain SB85_15975 SM00437 Bacterial DNA topoisomerase I DNA-binding domain SB85_15975 SM00493 SB85_15975 SB85_16000 SM00257 Lysin motif SB85_16090 SM00354 helix_turn _helix lactose operon repressor SB85_16100 SM00642 Alpha-amylase domain SB85_16105 SM00642 Alpha-amylase domain SB85_16110 SM00642 Alpha-amylase domain SB85_16145 SM00530 Helix-turn-helix XRE-family like proteins SB85_16180 SM00354 helix_turn _helix lactose operon repressor SB85_16220 SM00448 cheY-homologous receiver domain SB85_16220 SM00862 Transcriptional regulatory protein, C terminal SB85_16225 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SB85_16225 SM00387 Histidine kinase-like ATPases SB85_16225 SM00388 His Kinase A (phosphoacceptor) domain SB85_16265 SM00346 helix_turn_helix isocitrate lyase regulation SB85_16280 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). SB85_16280 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SB85_16280 SM01049 SB85_16280 SB85_16340 SM00387 Histidine kinase-like ATPases SB85_16340 SM00388 His Kinase A (phosphoacceptor) domain SB85_16345 SM00382 ATPases associated with a variety of cellular activities SB85_16345 SM00448 cheY-homologous receiver domain SB85_16375 SM00773 Proposed nucleic acid binding domain SB85_16390 SM00642 Alpha-amylase domain SB85_16395 SM00642 Alpha-amylase domain SB85_16405 SM00642 Alpha-amylase domain SB85_16410 SM00642 Alpha-amylase domain SB85_16425 SM00448 cheY-homologous receiver domain SB85_16430 SM00091 PAS domain SB85_16430 SM00387 Histidine kinase-like ATPases SB85_16430 SM00388 His Kinase A (phosphoacceptor) domain SB85_16450 SM00448 cheY-homologous receiver domain SB85_16450 SM00850 LytTr DNA-binding domain SB85_16540 SM00382 ATPases associated with a variety of cellular activities SB85_16540 SM01086 C-terminal, D2-small domain, of ClpB protein SB85_16565 SM01263 SB85_16565 SB85_16585 SM00564 beta-propeller repeat SB85_16590 SM00062 Bacterial periplasmic substrate-binding proteins SB85_16590 SM00248 ankyrin repeats SB85_16605 SM00829 Enoylreductase SB85_16615 SM00382 ATPases associated with a variety of cellular activities SB85_16635 SM00268 Actin SB85_16665 SM00710 Parallel beta-helix repeats SB85_16670 SM01002 Alanine dehydrogenase/PNT, C-terminal domain SB85_16670 SM01003 Alanine dehydrogenase/PNT, N-terminal domain SB85_16700 SM00936 Penicillin-binding protein 5, C-terminal domain SB85_16740 SM00729 Elongator protein 3, MiaB family, Radical SAM SB85_16745 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SB85_16745 SM00245 tail specific protease SB85_16810 SM01350 SB85_16810 SB85_16820 SM00749 bacterial OsmY and nodulation domain SB85_16830 SM00387 Histidine kinase-like ATPases SB85_16830 SM00388 His Kinase A (phosphoacceptor) domain SB85_16835 SM00448 cheY-homologous receiver domain SB85_16840 SM00387 Histidine kinase-like ATPases SB85_16840 SM00388 His Kinase A (phosphoacceptor) domain SB85_16840 SM00448 cheY-homologous receiver domain SB85_16880 SM00345 helix_turn_helix gluconate operon transcriptional repressor SB85_16880 SM00866 SB85_16880 SB85_16890 SM00354 helix_turn _helix lactose operon repressor SB85_16950 SM00849 Metallo-beta-lactamase superfamily SB85_16955 SM00342 helix_turn_helix, arabinose operon control protein SB85_16975 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SB85_16975 SM00387 Histidine kinase-like ATPases SB85_16975 SM00388 His Kinase A (phosphoacceptor) domain SB85_16980 SM00448 cheY-homologous receiver domain SB85_16980 SM00862 Transcriptional regulatory protein, C terminal SB85_16990 SM00829 Enoylreductase SB85_17065 SM00450 Rhodanese Homology Domain SB85_17100 SM01154 SB85_17100 SB85_17110 SM00642 Alpha-amylase domain SB85_17125 SM00354 helix_turn _helix lactose operon repressor SB85_17130 SM00822 SB85_17130 SB85_17145 SM00448 cheY-homologous receiver domain SB85_17145 SM00862 Transcriptional regulatory protein, C terminal SB85_17150 SM00387 Histidine kinase-like ATPases SB85_17150 SM00388 His Kinase A (phosphoacceptor) domain SB85_17160 SM00267 diguanylate cyclase SB85_17170 SM00421 helix_turn_helix, Lux Regulon SB85_17170 SM00448 cheY-homologous receiver domain SB85_17180 SM00387 Histidine kinase-like ATPases SB85_17180 SM00388 His Kinase A (phosphoacceptor) domain SB85_17180 SM00448 cheY-homologous receiver domain SB85_17195 SM00919 Malic enzyme, NAD binding domain SB85_17195 SM01274 SB85_17195 SB85_17200 SM00530 Helix-turn-helix XRE-family like proteins SB85_17215 SM00382 ATPases associated with a variety of cellular activities SB85_17220 SM00530 Helix-turn-helix XRE-family like proteins SB85_17275 SM01236 SB85_17275 SB85_17290 SM00448 cheY-homologous receiver domain SB85_17290 SM00862 Transcriptional regulatory protein, C terminal SB85_17295 SM00387 Histidine kinase-like ATPases SB85_17295 SM00388 His Kinase A (phosphoacceptor) domain SB85_17300 SM00267 diguanylate cyclase SB85_17305 SM01329 SB85_17305 SB85_17325 SM00917 LeuA allosteric (dimerisation) domain SB85_17360 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). SB85_17375 SM00862 Transcriptional regulatory protein, C terminal SB85_17380 SM00342 helix_turn_helix, arabinose operon control protein SB85_17435 SM00464 Found in ATP-dependent protease La (LON) SB85_17545 SM00052 Putative diguanylate phosphodiesterase SB85_17545 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SB85_17545 SM00091 PAS domain SB85_17545 SM00267 diguanylate cyclase SB85_17555 SM01011 Aminopeptidase P, N-terminal domain SB85_17575 SM00729 Elongator protein 3, MiaB family, Radical SAM SB85_17635 SM00965 Secretin and TonB N terminus short domain SB85_17650 SM00072 Guanylate kinase homologues. SB85_17655 SM01409 SB85_17655 SB85_17660 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SB85_17660 SM00954 Region found in RelA / SpoT proteins SB85_17670 SM00487 DEAD-like helicases superfamily SB85_17670 SM00490 helicase superfamily c-terminal domain SB85_17700 SM00842 Cell division protein FtsA SB85_17720 SM00965 Secretin and TonB N terminus short domain SB85_17725 SM00382 ATPases associated with a variety of cellular activities SB85_17740 SM00327 von Willebrand factor (vWF) type A domain SB85_17745 SM00028 Tetratricopeptide repeats SB85_17745 SM00327 von Willebrand factor (vWF) type A domain SB85_17765 SM00861 Transketolase, pyrimidine binding domain SB85_17835 SM00903 Flavin reductase like domain SB85_17840 SM00382 ATPases associated with a variety of cellular activities SB85_17855 SM00849 Metallo-beta-lactamase superfamily SB85_17860 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor SB85_17865 SM00450 Rhodanese Homology Domain SB85_17905 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SB85_17960 SM00448 cheY-homologous receiver domain SB85_17960 SM00862 Transcriptional regulatory protein, C terminal SB85_17965 SM00387 Histidine kinase-like ATPases SB85_17965 SM00388 His Kinase A (phosphoacceptor) domain SB85_17970 SM00912 haemagglutination activity domain SB85_17980 SM00506 Appr-1"-p processing enzyme SB85_18000 SM00028 Tetratricopeptide repeats SB85_18025 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SB85_18025 SM00387 Histidine kinase-like ATPases SB85_18125 SM00354 helix_turn _helix lactose operon repressor SB85_18180 SM00869 Autotransporter beta-domain SB85_18190 SM00855 Phosphoglycerate mutase family SB85_18210 SM00448 cheY-homologous receiver domain SB85_18210 SM00862 Transcriptional regulatory protein, C terminal SB85_18215 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SB85_18215 SM00387 Histidine kinase-like ATPases SB85_18215 SM00388 His Kinase A (phosphoacceptor) domain SB85_18245 SM00382 ATPases associated with a variety of cellular activities SB85_18245 SM00448 cheY-homologous receiver domain SB85_18250 SM00387 Histidine kinase-like ATPases SB85_18250 SM00388 His Kinase A (phosphoacceptor) domain SB85_18260 SM00881 CoA binding domain SB85_18305 SM00382 ATPases associated with a variety of cellular activities SB85_18365 SM00354 helix_turn _helix lactose operon repressor SB85_18385 SM00363 S4 RNA-binding domain SB85_18410 SM00421 helix_turn_helix, Lux Regulon SB85_18410 SM00448 cheY-homologous receiver domain SB85_18420 SM00052 Putative diguanylate phosphodiesterase SB85_18500 SM00382 ATPases associated with a variety of cellular activities SB85_18505 SM00382 ATPases associated with a variety of cellular activities SB85_18535 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain SB85_18545 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase SB85_18560 SM00859 Semialdehyde dehydrogenase, NAD binding domain SB85_18640 SM01234 SB85_18640 SB85_18690 SM00841 Elongation factor P, C-terminal SB85_18690 SM01185 SB85_18690 SB85_18700 SM00052 Putative diguanylate phosphodiesterase SB85_18700 SM00267 diguanylate cyclase SB85_18700 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SB85_18720 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). SB85_18735 SM01323 SB85_18735 SB85_18745 SM00382 ATPases associated with a variety of cellular activities SB85_18775 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SB85_18775 SM00267 diguanylate cyclase SB85_18780 SM00363 S4 RNA-binding domain SB85_18785 SM00487 DEAD-like helicases superfamily SB85_18785 SM00490 helicase superfamily c-terminal domain SB85_18825 SM00342 helix_turn_helix, arabinose operon control protein SB85_18825 SM00478 endonuclease III SB85_18825 SM01009 AlkA N-terminal domain SB85_18875 SM01092 CO dehydrogenase flavoprotein C-terminal domain SB85_18880 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain SB85_18920 SM00382 ATPases associated with a variety of cellular activities SB85_18955 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SB85_18955 SM00387 Histidine kinase-like ATPases SB85_18955 SM00388 His Kinase A (phosphoacceptor) domain SB85_18960 SM00448 cheY-homologous receiver domain SB85_18960 SM00862 Transcriptional regulatory protein, C terminal SB85_18965 SM00267 diguanylate cyclase SB85_18985 SM00487 DEAD-like helicases superfamily SB85_18985 SM00490 helicase superfamily c-terminal domain SB85_18985 SM00982 SB85_18985 SB85_18985 SM01058 CarD-like/TRCF domain SB85_18995 SM00073 Histidine Phosphotransfer domain SB85_18995 SM00260 Two component signalling adaptor domain SB85_18995 SM00387 Histidine kinase-like ATPases SB85_18995 SM01231 SB85_18995 SB85_19000 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). SB85_19000 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SB85_19005 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). SB85_19005 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SB85_19010 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). SB85_19015 SM00260 Two component signalling adaptor domain SB85_19020 SM00052 Putative diguanylate phosphodiesterase SB85_19020 SM00448 cheY-homologous receiver domain SB85_19025 SM00138 Methyltransferase, chemotaxis proteins SB85_19030 SM00448 cheY-homologous receiver domain SB85_19035 SM00342 helix_turn_helix, arabinose operon control protein SB85_19060 SM00855 Phosphoglycerate mutase family SB85_19100 SM00248 ankyrin repeats SB85_19140 SM00354 helix_turn _helix lactose operon repressor SB85_19255 SM00411 bacterial (prokaryotic) histone like domain SB85_19285 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain SB85_19300 SM00382 ATPases associated with a variety of cellular activities SB85_19330 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. SB85_19340 SM00448 cheY-homologous receiver domain SB85_19340 SM00862 Transcriptional regulatory protein, C terminal SB85_19375 SM00382 ATPases associated with a variety of cellular activities SB85_19435 SM00116 Domain in cystathionine beta-synthase and other proteins. SB85_19455 SM00382 ATPases associated with a variety of cellular activities SB85_19500 SM00924 MgtE intracellular N domain SB85_19510 SM00028 Tetratricopeptide repeats SB85_19535 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). SB85_19535 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SB85_19540 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). SB85_19540 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SB85_19545 SM00656 SB85_19545 SB85_19560 SM00732 Likely ribonuclease with RNase H fold. SB85_19615 SM00267 diguanylate cyclase SB85_19630 SM00382 ATPases associated with a variety of cellular activities SB85_19660 SM00422 helix_turn_helix, mercury resistance SB85_19715 SM00342 helix_turn_helix, arabinose operon control protein SB85_19755 SM00867 YceI-like domain SB85_19795 SM00450 Rhodanese Homology Domain SB85_19810 SM00642 Alpha-amylase domain SB85_19840 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain SB85_19850 SM00382 ATPases associated with a variety of cellular activities SB85_19890 SM00382 ATPases associated with a variety of cellular activities SB85_19900 SM01103 SB85_19900 SB85_19910 SM00257 Lysin motif SB85_19930 SM00463 Small MutS-related domain SB85_19950 SM00965 Secretin and TonB N terminus short domain SB85_19975 SM01192 SB85_19975 SB85_19975 SM01193 SB85_19975 SB85_20005 SM00387 Histidine kinase-like ATPases SB85_20005 SM00433 TopoisomeraseII SB85_20030 SM01091 Transporter associated domain SB85_20055 SM00450 Rhodanese Homology Domain SB85_20080 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SB85_20080 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SB85_20080 SM00091 PAS domain SB85_20080 SM00267 diguanylate cyclase SB85_20095 SM00984 UDP binding domain SB85_20105 SM00354 helix_turn _helix lactose operon repressor SB85_20130 SM00448 cheY-homologous receiver domain SB85_20130 SM00862 Transcriptional regulatory protein, C terminal SB85_20135 SM00387 Histidine kinase-like ATPases SB85_20135 SM00388 His Kinase A (phosphoacceptor) domain SB85_20150 SM00382 ATPases associated with a variety of cellular activities SB85_20195 SM00825 Beta-ketoacyl synthase SB85_20220 SM00729 Elongator protein 3, MiaB family, Radical SAM SB85_20255 SM00530 Helix-turn-helix XRE-family like proteins SB85_20285 SM00965 Secretin and TonB N terminus short domain SB85_20290 SM00028 Tetratricopeptide repeats SB85_20415 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SB85_20415 SM00465 GIY-YIG type nucleases (URI domain) SB85_20425 SM00226 Low molecular weight phosphatase family SB85_20440 SM00382 ATPases associated with a variety of cellular activities SB85_20455 SM00849 Metallo-beta-lactamase superfamily SB85_20465 SM00382 ATPases associated with a variety of cellular activities