locus-tag class description NG828_00005 PF00308 Bacterial dnaA protein NG828_00005 PF08299 Bacterial dnaA protein helix-turn-helix NG828_00005 PF11638 DnaA N-terminal domain NG828_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain NG828_00010 PF02767 DNA polymerase III beta subunit, central domain NG828_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain NG828_00015 PF02463 RecF/RecN/SMC N terminal domain NG828_00020 PF00204 DNA gyrase B NG828_00020 PF00986 DNA gyrase B subunit, carboxyl terminus NG828_00020 PF18053 DNA gyrase B subunit insert domain NG828_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG828_00020 PF01751 Toprim domain NG828_00025 PF02517 CPBP intramembrane metalloprotease NG828_00030 PF01435 Peptidase family M48 NG828_00040 PF03544 Gram-negative bacterial TonB protein C-terminal NG828_00045 PF01618 MotA/TolQ/ExbB proton channel family NG828_00050 PF02472 Biopolymer transport protein ExbD/TolR NG828_00055 PF02472 Biopolymer transport protein ExbD/TolR NG828_00060 PF02472 Biopolymer transport protein ExbD/TolR NG828_00065 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ NG828_00075 PF13091 PLD-like domain NG828_00075 PF13396 Phospholipase_D-nuclease N-terminal NG828_00080 PF04055 Radical SAM superfamily NG828_00090 PF03358 NADPH-dependent FMN reductase NG828_00105 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain NG828_00110 PF00155 Aminotransferase class I and II NG828_00115 PF07715 TonB-dependent Receptor Plug Domain NG828_00115 PF00593 TonB dependent receptor NG828_00130 PF00158 Sigma-54 interaction domain NG828_00130 PF02954 Bacterial regulatory protein, Fis family NG828_00130 PF01590 GAF domain NG828_00135 PF00171 Aldehyde dehydrogenase family NG828_00140 PF08240 Alcohol dehydrogenase GroES-like domain NG828_00140 PF00107 Zinc-binding dehydrogenase NG828_00165 PF02735 Ku70/Ku80 beta-barrel domain NG828_00170 PF01070 FMN-dependent dehydrogenase NG828_00175 PF07729 FCD domain NG828_00175 PF00392 Bacterial regulatory proteins, gntR family NG828_00190 PF07730 Histidine kinase NG828_00195 PF00196 Bacterial regulatory proteins, luxR family NG828_00195 PF00072 Response regulator receiver domain NG828_00200 PF07055 Enoyl reductase FAD binding domain NG828_00200 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase NG828_00200 PF12241 Trans-2-enoyl-CoA reductase catalytic region NG828_00400 PF07715 TonB-dependent Receptor Plug Domain NG828_00400 PF00593 TonB dependent receptor NG828_00405 PF07715 TonB-dependent Receptor Plug Domain NG828_00430 PF00135 Carboxylesterase family NG828_00435 PF13472 GDSL-like Lipase/Acylhydrolase family NG828_00435 PF07859 alpha/beta hydrolase fold NG828_00445 PF03480 Bacterial extracellular solute-binding protein, family 7 NG828_00455 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component NG828_00460 PF00356 Bacterial regulatory proteins, lacI family NG828_00470 PF04962 KduI/IolB family NG828_00490 PF03783 Curli production assembly/transport component CsgG NG828_00500 PF05643 Putative bacterial lipoprotein (DUF799) NG828_00505 PF00351 Biopterin-dependent aromatic amino acid hydroxylase NG828_00510 PF01037 Lrp/AsnC ligand binding domain NG828_00515 PF00593 TonB dependent receptor NG828_00515 PF07660 Secretin and TonB N terminus short domain NG828_00515 PF07715 TonB-dependent Receptor Plug Domain NG828_00530 PF01734 Patatin-like phospholipase NG828_00550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG828_00550 PF02203 Tar ligand binding domain homologue NG828_00550 PF00672 HAMP domain NG828_00555 PF01569 PAP2 superfamily NG828_00565 PF03741 Integral membrane protein TerC family NG828_00570 PF10672 S-adenosylmethionine-dependent methyltransferase NG828_00570 PF17785 PUA-like domain NG828_00575 PF02595 Glycerate kinase family NG828_00590 PF13520 Amino acid permease NG828_00595 PF00072 Response regulator receiver domain NG828_00595 PF00196 Bacterial regulatory proteins, luxR family NG828_00600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG828_00600 PF00989 PAS fold NG828_00600 PF08447 PAS fold NG828_00600 PF13426 PAS domain NG828_00600 PF13493 Domain of unknown function (DUF4118) NG828_00600 PF00512 His Kinase A (phospho-acceptor) domain NG828_00605 PF02308 MgtC family NG828_00615 PF02646 RmuC family NG828_00620 PF00255 Glutathione peroxidase NG828_00630 PF04333 MlaA lipoprotein NG828_00645 PF02470 MlaD protein NG828_00650 PF02405 Permease MlaE NG828_00655 PF00005 ABC transporter NG828_00690 PF17946 RecC C-terminal domain NG828_00695 PF12705 PD-(D/E)XK nuclease superfamily NG828_00695 PF00580 UvrD/REP helicase N-terminal domain NG828_00695 PF13361 UvrD-like helicase C-terminal domain NG828_00700 PF13538 UvrD-like helicase C-terminal domain NG828_00790 PF02203 Tar ligand binding domain homologue NG828_00790 PF00672 HAMP domain NG828_00790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG828_00800 PF00083 Sugar (and other) transporter NG828_00805 PF01227 GTP cyclohydrolase I NG828_00830 PF02810 SEC-C motif NG828_00835 PF13406 Transglycosylase SLT domain NG828_00840 PF07690 Major Facilitator Superfamily NG828_00845 PF01126 Heme oxygenase NG828_00850 PF01590 GAF domain NG828_00850 PF08446 PAS fold NG828_00850 PF00360 Phytochrome region NG828_00850 PF13426 PAS domain NG828_00855 PF03594 Benzoate membrane transport protein NG828_00900 PF02142 MGS-like domain NG828_00905 PF00150 Cellulase (glycosyl hydrolase family 5) NG828_00910 PF00150 Cellulase (glycosyl hydrolase family 5) NG828_00915 PF00150 Cellulase (glycosyl hydrolase family 5) NG828_00920 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NG828_00920 PF07992 Pyridine nucleotide-disulphide oxidoreductase NG828_00925 PF00310 Glutamine amidotransferases class-II NG828_00925 PF04898 Glutamate synthase central domain NG828_00925 PF01645 Conserved region in glutamate synthase NG828_00925 PF01493 GXGXG motif NG828_00955 PF04679 ATP dependent DNA ligase C terminal region NG828_00955 PF01068 ATP dependent DNA ligase domain NG828_00955 PF13298 DNA polymerase Ligase (LigD) NG828_01005 PF00271 Helicase conserved C-terminal domain NG828_01005 PF09369 Domain of unknown function (DUF1998) NG828_01005 PF00270 DEAD/DEAH box helicase NG828_01020 PF03006 Haemolysin-III related NG828_01050 PF00083 Sugar (and other) transporter NG828_01100 PF00004 ATPase family associated with various cellular activities (AAA) NG828_01100 PF17862 AAA+ lid domain NG828_01100 PF01434 Peptidase family M41 NG828_01105 PF13614 AAA domain NG828_01120 PF13091 PLD-like domain NG828_01125 PF03061 Thioesterase superfamily NG828_01150 PF02673 Bacitracin resistance protein BacA NG828_01155 PF03951 Glutamine synthetase, beta-Grasp domain NG828_01155 PF00120 Glutamine synthetase, catalytic domain NG828_01160 PF00543 Nitrogen regulatory protein P-II NG828_01165 PF00909 Ammonium Transporter Family NG828_01170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG828_01170 PF00512 His Kinase A (phospho-acceptor) domain NG828_01170 PF00989 PAS fold NG828_01175 PF00158 Sigma-54 interaction domain NG828_01175 PF00072 Response regulator receiver domain NG828_01175 PF02954 Bacterial regulatory protein, Fis family NG828_01180 PF00080 Copper/zinc superoxide dismutase (SODC) NG828_01185 PF00080 Copper/zinc superoxide dismutase (SODC) NG828_01200 PF02803 Thiolase, C-terminal domain NG828_01200 PF00108 Thiolase, N-terminal domain NG828_01225 PF00583 Acetyltransferase (GNAT) family NG828_01225 PF09500 Putative thioesterase (yiiD_Cterm) NG828_01240 PF02556 Preprotein translocase subunit SecB NG828_01245 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NG828_01245 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NG828_01255 PF00440 Bacterial regulatory proteins, tetR family NG828_01265 PF00588 SpoU rRNA Methylase family NG828_01275 PF00675 Insulinase (Peptidase family M16) NG828_01275 PF05193 Peptidase M16 inactive domain NG828_01285 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NG828_01285 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NG828_01290 PF02661 Fic/DOC family NG828_01290 PF13784 Fic/DOC family N-terminal NG828_01295 PF00561 alpha/beta hydrolase fold NG828_01305 PF03692 Putative zinc- or iron-chelating domain NG828_01310 PF00501 AMP-binding enzyme NG828_01315 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family NG828_01330 PF03109 ABC1 family NG828_01335 PF01596 O-methyltransferase NG828_01340 PF00849 RNA pseudouridylate synthase NG828_01370 PF00472 RF-1 domain NG828_01380 PF00593 TonB dependent receptor NG828_01380 PF07715 TonB-dependent Receptor Plug Domain NG828_01390 PF04542 Sigma-70 region 2 NG828_01390 PF08281 Sigma-70, region 4 NG828_01400 PF01112 Asparaginase NG828_01405 PF01432 Peptidase family M3 NG828_01420 PF10502 Signal peptidase, peptidase S26 NG828_01430 PF12833 Helix-turn-helix domain NG828_01435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NG828_01435 PF03466 LysR substrate binding domain NG828_01440 PF01274 Malate synthase NG828_01445 PF00463 Isocitrate lyase family NG828_01450 PF00990 Diguanylate cyclase, GGDEF domain NG828_01450 PF08448 PAS fold NG828_01485 PF01740 STAS domain NG828_01485 PF00916 Sulfate permease family NG828_01515 PF00378 Enoyl-CoA hydratase/isomerase NG828_01520 PF00501 AMP-binding enzyme NG828_01530 PF07690 Major Facilitator Superfamily NG828_01550 PF00171 Aldehyde dehydrogenase family NG828_01560 PF01494 FAD binding domain NG828_01570 PF00970 Oxidoreductase FAD-binding domain NG828_01570 PF00111 2Fe-2S iron-sulfur cluster binding domain NG828_01580 PF00355 Rieske [2Fe-2S] domain NG828_01585 PF01144 Coenzyme A transferase NG828_01590 PF01144 Coenzyme A transferase NG828_01595 PF02803 Thiolase, C-terminal domain NG828_01595 PF00108 Thiolase, N-terminal domain NG828_01600 PF00775 Dioxygenase NG828_01600 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal NG828_01605 PF00775 Dioxygenase NG828_01605 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal NG828_01610 PF00206 Lyase NG828_01610 PF10397 Adenylosuccinate lyase C-terminus NG828_01615 PF12146 Serine aminopeptidase, S33 NG828_01620 PF02627 Carboxymuconolactone decarboxylase family NG828_01625 PF09339 IclR helix-turn-helix domain NG828_01625 PF01614 Bacterial transcriptional regulator NG828_01630 PF16884 N-terminal domain of oxidoreductase NG828_01630 PF00107 Zinc-binding dehydrogenase NG828_01635 PF00248 Aldo/keto reductase family NG828_01645 PF00849 RNA pseudouridylate synthase NG828_01660 PF04408 Helicase associated domain (HA2) NG828_01660 PF00271 Helicase conserved C-terminal domain NG828_01660 PF00270 DEAD/DEAH box helicase NG828_01660 PF08482 ATP-dependent helicase C-terminal NG828_01665 PF01026 TatD related DNase NG828_01680 PF00691 OmpA family NG828_01680 PF05736 OprF membrane domain NG828_01710 PF00437 Type II/IV secretion system protein NG828_01715 PF00263 Bacterial type II and III secretion system protein NG828_01715 PF03958 Bacterial type II/III secretion system short domain NG828_01765 PF01061 ABC-2 type transporter NG828_01770 PF00005 ABC transporter NG828_01775 PF00970 Oxidoreductase FAD-binding domain NG828_01775 PF00111 2Fe-2S iron-sulfur cluster binding domain NG828_01775 PF00175 Oxidoreductase NAD-binding domain NG828_01785 PF01381 Helix-turn-helix NG828_01790 PF00561 alpha/beta hydrolase fold NG828_01795 PF00005 ABC transporter NG828_01815 PF03350 Uncharacterized protein family, UPF0114 NG828_01820 PF02798 Glutathione S-transferase, N-terminal domain NG828_01820 PF00043 Glutathione S-transferase, C-terminal domain NG828_01825 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region NG828_01825 PF00326 Prolyl oligopeptidase family NG828_01865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NG828_01865 PF03466 LysR substrate binding domain NG828_01875 PF00175 Oxidoreductase NAD-binding domain NG828_01875 PF00667 FAD binding domain NG828_01875 PF00258 Flavodoxin NG828_01880 PF04052 TolB amino-terminal domain NG828_01880 PF07676 WD40-like Beta Propeller Repeat NG828_01885 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NG828_01885 PF01488 Shikimate / quinate 5-dehydrogenase NG828_01885 PF08501 Shikimate dehydrogenase substrate binding domain NG828_01905 PF06733 DEAD_2 NG828_01905 PF13307 Helicase C-terminal domain NG828_01920 PF00199 Catalase NG828_01920 PF06628 Catalase-related immune-responsive NG828_01950 PF07690 Major Facilitator Superfamily NG828_01955 PF04185 Phosphoesterase family NG828_01955 PF05506 Domain of unknown function (DUF756) NG828_01965 PF01594 AI-2E family transporter NG828_01985 PF10905 Protein of unknown function (DUF2695) NG828_02045 PF00920 Dehydratase family NG828_02060 PF03738 Glutathionylspermidine synthase preATP-grasp NG828_02085 PF07726 ATPase family associated with various cellular activities (AAA) NG828_02085 PF17863 AAA lid domain NG828_02115 PF00132 Bacterial transferase hexapeptide (six repeats) NG828_02120 PF05048 Periplasmic copper-binding protein (NosD) NG828_02125 PF04966 Carbohydrate-selective porin, OprB family NG828_02130 PF01487 Type I 3-dehydroquinase NG828_02135 PF07690 Major Facilitator Superfamily NG828_02140 PF01011 PQQ enzyme repeat NG828_02145 PF00529 HlyD membrane-fusion protein of T1SS NG828_02145 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NG828_02150 PF00873 AcrB/AcrD/AcrF family NG828_02155 PF02321 Outer membrane efflux protein NG828_02160 PF00069 Protein kinase domain NG828_02160 PF00400 WD domain, G-beta repeat NG828_02165 PF07859 alpha/beta hydrolase fold NG828_02170 PF10127 RNA repair pathway DNA polymerase beta family NG828_02175 PF01134 Glucose inhibited division protein A NG828_02175 PF13932 GidA associated domain NG828_02185 PF00291 Pyridoxal-phosphate dependent enzyme NG828_02200 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase NG828_02205 PF13649 Methyltransferase domain NG828_02215 PF12697 Alpha/beta hydrolase family NG828_02225 PF00155 Aminotransferase class I and II NG828_02230 PF06968 Biotin and Thiamin Synthesis associated domain NG828_02230 PF04055 Radical SAM superfamily NG828_02240 PF01040 UbiA prenyltransferase family NG828_02250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG828_02250 PF00512 His Kinase A (phospho-acceptor) domain NG828_02250 PF00989 PAS fold NG828_02250 PF11808 Phosphate regulon sensor protein PhoR NG828_02255 PF00486 Transcriptional regulatory protein, C terminal NG828_02255 PF00072 Response regulator receiver domain NG828_02260 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB NG828_02260 PF08479 POTRA domain, ShlB-type NG828_02265 PF05860 haemagglutination activity domain NG828_02275 PF01078 Magnesium chelatase, subunit ChlI NG828_02275 PF13335 Magnesium chelatase, subunit ChlI C-terminal NG828_02280 PF04380 Membrane fusogenic activity NG828_02285 PF00543 Nitrogen regulatory protein P-II NG828_02295 PF17284 Spermidine synthase tetramerisation domain NG828_02300 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NG828_02300 PF17944 Arginine decarboxylase C-terminal helical extension NG828_02300 PF17810 Arginine decarboxylase helical bundle domain NG828_02305 PF01757 Acyltransferase family NG828_02310 PF03466 LysR substrate binding domain NG828_02310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NG828_02345 PF00106 short chain dehydrogenase NG828_02355 PF03485 Arginyl tRNA synthetase N terminal domain NG828_02355 PF05746 DALR anticodon binding domain NG828_02355 PF00750 tRNA synthetases class I (R) NG828_02360 PF04002 RadC-like JAB domain NG828_02365 PF04127 DNA / pantothenate metabolism flavoprotein NG828_02365 PF02441 Flavoprotein NG828_02370 PF00692 dUTPase NG828_02375 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NG828_02375 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NG828_02375 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NG828_02375 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NG828_02385 PF00156 Phosphoribosyl transferase domain NG828_02390 PF03372 Endonuclease/Exonuclease/phosphatase family NG828_02395 PF07690 Major Facilitator Superfamily NG828_02405 PF03702 Anhydro-N-acetylmuramic acid kinase NG828_02410 PF04225 Opacity-associated protein A LysM-like domain NG828_02410 PF01551 Peptidase family M23 NG828_02415 PF00579 tRNA synthetases class I (W and Y) NG828_02445 PF08240 Alcohol dehydrogenase GroES-like domain NG828_02445 PF00107 Zinc-binding dehydrogenase NG828_02450 PF04389 Peptidase family M28 NG828_02460 PF01551 Peptidase family M23 NG828_02465 PF13180 PDZ domain NG828_02465 PF03572 Peptidase family S41 NG828_02470 PF01842 ACT domain NG828_02470 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NG828_02470 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NG828_02485 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) NG828_02490 PF18327 Proline utilization A proline dehydrogenase N-terminal domain NG828_02490 PF14850 DNA-binding domain of Proline dehydrogenase NG828_02490 PF01619 Proline dehydrogenase NG828_02490 PF00171 Aldehyde dehydrogenase family NG828_02500 PF02790 Cytochrome C oxidase subunit II, transmembrane domain NG828_02500 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NG828_02505 PF00115 Cytochrome C and Quinol oxidase polypeptide I NG828_02510 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 NG828_02515 PF00510 Cytochrome c oxidase subunit III NG828_02540 PF01040 UbiA prenyltransferase family NG828_02545 PF00672 HAMP domain NG828_02545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG828_02545 PF02203 Tar ligand binding domain homologue NG828_02560 PF13593 SBF-like CPA transporter family (DUF4137) NG828_02570 PF08275 DNA primase catalytic core, N-terminal domain NG828_02570 PF01807 CHC2 zinc finger NG828_02570 PF10410 DnaB-helicase binding domain of primase NG828_02570 PF08278 DNA primase DnaG DnaB-binding NG828_02575 PF03631 Virulence factor BrkB NG828_02585 PF01165 Ribosomal protein S21 NG828_02590 PF00814 Glycoprotease family NG828_02595 PF02152 Dihydroneopterin aldolase NG828_02600 PF00924 Mechanosensitive ion channel NG828_02605 PF14403 Circularly permuted ATP-grasp type 2 NG828_02615 PF14310 Fibronectin type III-like domain NG828_02615 PF00933 Glycosyl hydrolase family 3 N terminal domain NG828_02615 PF01915 Glycosyl hydrolase family 3 C-terminal domain NG828_02620 PF05360 yiaA/B two helix domain NG828_02625 PF07995 Glucose / Sorbosone dehydrogenase NG828_02650 PF13520 Amino acid permease NG828_02660 PF00356 Bacterial regulatory proteins, lacI family NG828_02680 PF04820 Tryptophan halogenase NG828_02685 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NG828_02685 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NG828_02695 PF14310 Fibronectin type III-like domain NG828_02695 PF00933 Glycosyl hydrolase family 3 N terminal domain NG828_02695 PF01915 Glycosyl hydrolase family 3 C-terminal domain NG828_02700 PF00356 Bacterial regulatory proteins, lacI family NG828_02705 PF03648 Glycosyl hydrolase family 67 N-terminus NG828_02705 PF07488 Glycosyl hydrolase family 67 middle domain NG828_02705 PF07477 Glycosyl hydrolase family 67 C-terminus NG828_02715 PF04616 Glycosyl hydrolases family 43 NG828_02715 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain NG828_02720 PF00933 Glycosyl hydrolase family 3 N terminal domain NG828_02720 PF14310 Fibronectin type III-like domain NG828_02720 PF07691 PA14 domain NG828_02720 PF01915 Glycosyl hydrolase family 3 C-terminal domain NG828_02730 PF04616 Glycosyl hydrolases family 43 NG828_02735 PF13378 Enolase C-terminal domain-like NG828_02735 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NG828_02745 PF07715 TonB-dependent Receptor Plug Domain NG828_02745 PF00593 TonB dependent receptor NG828_02750 PF01510 N-acetylmuramoyl-L-alanine amidase NG828_02775 PF04717 Type VI secretion system, phage-baseplate injector NG828_02775 PF01471 Putative peptidoglycan binding domain NG828_02780 PF01427 D-ala-D-ala dipeptidase NG828_02810 PF07063 Domain of unknown function (DUF1338) NG828_02815 PF00883 Cytosol aminopeptidase family, catalytic domain NG828_02815 PF02789 Cytosol aminopeptidase family, N-terminal domain NG828_02820 PF13419 Haloacid dehalogenase-like hydrolase NG828_02825 PF01594 AI-2E family transporter NG828_02850 PF13180 PDZ domain NG828_02850 PF00595 PDZ domain NG828_02855 PF14528 LAGLIDADG-like domain NG828_02855 PF00772 DnaB-like helicase N terminal domain NG828_02855 PF03796 DnaB-like helicase C terminal domain NG828_02895 PF00106 short chain dehydrogenase NG828_02930 PF03372 Endonuclease/Exonuclease/phosphatase family NG828_02935 PF01966 HD domain NG828_02935 PF00013 KH domain NG828_02935 PF12072 Domain of unknown function (DUF3552) NG828_02940 PF07308 Protein of unknown function (DUF1456) NG828_02945 PF00455 DeoR C terminal sensor domain NG828_02945 PF08220 DeoR-like helix-turn-helix domain NG828_02950 PF01266 FAD dependent oxidoreductase NG828_02950 PF16901 C-terminal domain of alpha-glycerophosphate oxidase NG828_02955 PF00230 Major intrinsic protein NG828_02960 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NG828_02960 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NG828_02970 PF13419 Haloacid dehalogenase-like hydrolase NG828_02980 PF00248 Aldo/keto reductase family NG828_02995 PF01557 Fumarylacetoacetate (FAA) hydrolase family NG828_03000 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NG828_03000 PF13378 Enolase C-terminal domain-like NG828_03005 PF05336 L-rhamnose mutarotase NG828_03010 PF07690 Major Facilitator Superfamily NG828_03015 PF09339 IclR helix-turn-helix domain NG828_03015 PF01614 Bacterial transcriptional regulator NG828_03050 PF02678 Pirin NG828_03050 PF05726 Pirin C-terminal cupin domain NG828_03075 PF08240 Alcohol dehydrogenase GroES-like domain NG828_03075 PF00107 Zinc-binding dehydrogenase NG828_03080 PF12794 Mechanosensitive ion channel inner membrane domain 1 NG828_03080 PF00924 Mechanosensitive ion channel NG828_03080 PF12795 Mechanosensitive ion channel porin domain NG828_03085 PF03109 ABC1 family NG828_03100 PF02733 Dak1 domain NG828_03100 PF02734 DAK2 domain NG828_03105 PF05661 Protein of unknown function (DUF808) NG828_03110 PF00990 Diguanylate cyclase, GGDEF domain NG828_03120 PF02308 MgtC family NG828_03125 PF00294 pfkB family carbohydrate kinase NG828_03145 PF00270 DEAD/DEAH box helicase NG828_03145 PF00271 Helicase conserved C-terminal domain NG828_03150 PF03413 Peptidase propeptide and YPEB domain NG828_03150 PF02868 Thermolysin metallopeptidase, alpha-helical domain NG828_03150 PF04151 Bacterial pre-peptidase C-terminal domain NG828_03150 PF07504 Fungalysin/Thermolysin Propeptide Motif NG828_03150 PF01447 Thermolysin metallopeptidase, catalytic domain NG828_03155 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NG828_03155 PF00364 Biotin-requiring enzyme NG828_03155 PF02817 e3 binding domain NG828_03165 PF02779 Transketolase, pyrimidine binding domain NG828_03165 PF02780 Transketolase, C-terminal domain NG828_03170 PF00676 Dehydrogenase E1 component NG828_03185 PF03301 Tryptophan 2,3-dioxygenase NG828_03190 PF00854 POT family NG828_03205 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NG828_03210 PF04480 Protein of unknown function (DUF559) NG828_03215 PF04209 homogentisate 1,2-dioxygenase NG828_03230 PF00873 AcrB/AcrD/AcrF family NG828_03235 PF00873 AcrB/AcrD/AcrF family NG828_03240 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NG828_03245 PF07687 Peptidase dimerisation domain NG828_03245 PF01546 Peptidase family M20/M25/M40 NG828_03250 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term NG828_03250 PF14489 QueF-like protein NG828_03255 PF04972 BON domain NG828_03255 PF01476 LysM domain NG828_03265 PF01979 Amidohydrolase family NG828_03270 PF08220 DeoR-like helix-turn-helix domain NG828_03270 PF00455 DeoR C terminal sensor domain NG828_03275 PF08013 Tagatose 6 phosphate kinase NG828_03280 PF00480 ROK family NG828_03285 PF01380 SIS domain NG828_03290 PF17137 Domain of unknown function (DUF5110) NG828_03290 PF16338 Domain of unknown function (DUF4968) NG828_03290 PF01055 Glycosyl hydrolases family 31 NG828_03295 PF00593 TonB dependent receptor NG828_03295 PF07715 TonB-dependent Receptor Plug Domain NG828_03300 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NG828_03310 PF09827 CRISPR associated protein Cas2 NG828_03315 PF01867 CRISPR associated protein Cas1 NG828_03335 PF09704 CRISPR-associated protein (Cas_Cas5) NG828_03340 PF17191 RecG wedge domain NG828_03340 PF00271 Helicase conserved C-terminal domain NG828_03340 PF00270 DEAD/DEAH box helicase NG828_03345 PF03971 Monomeric isocitrate dehydrogenase NG828_03350 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) NG828_03365 PF07497 Rho termination factor, RNA-binding domain NG828_03365 PF07498 Rho termination factor, N-terminal domain NG828_03365 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NG828_03370 PF00085 Thioredoxin NG828_03375 PF12300 ATP-dependent RNA helicase RhlB NG828_03375 PF00271 Helicase conserved C-terminal domain NG828_03375 PF00270 DEAD/DEAH box helicase NG828_03380 PF00005 ABC transporter NG828_03385 PF18075 FtsX extracellular domain NG828_03390 PF01339 CheB methylesterase NG828_03390 PF00072 Response regulator receiver domain NG828_03395 PF03167 Uracil DNA glycosylase superfamily NG828_03400 PF04545 Sigma-70, region 4 NG828_03400 PF04542 Sigma-70 region 2 NG828_03405 PF03458 UPF0126 domain NG828_03410 PF07992 Pyridine nucleotide-disulphide oxidoreductase NG828_03420 PF17764 3′ DNA-binding domain (3′BD) NG828_03420 PF18074 Primosomal protein N C-terminal domain NG828_03420 PF18319 PriA DNA helicase Cys-rich region (CRR) domain NG828_03420 PF00271 Helicase conserved C-terminal domain NG828_03420 PF00270 DEAD/DEAH box helicase NG828_03430 PF01554 MatE NG828_03435 PF01343 Peptidase family S49 NG828_03465 PF01300 Telomere recombination NG828_03470 PF01751 Toprim domain NG828_03470 PF01131 DNA topoisomerase NG828_03470 PF13368 Topoisomerase C-terminal repeat NG828_03475 PF06271 RDD family NG828_03480 PF07963 Prokaryotic N-terminal methylation motif NG828_03480 PF00114 Pilin (bacterial filament) NG828_03485 PF04361 Protein of unknown function (DUF494) NG828_03490 PF02481 DNA recombination-mediator protein A NG828_03490 PF17782 DprA winged helix domain NG828_03495 PF01476 LysM domain NG828_03500 PF01327 Polypeptide deformylase NG828_03505 PF02911 Formyl transferase, C-terminal domain NG828_03505 PF00551 Formyl transferase NG828_03510 PF01029 NusB family NG828_03510 PF01189 16S rRNA methyltransferase RsmB/F NG828_03515 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase NG828_03530 PF00535 Glycosyl transferase family 2 NG828_03550 PF00925 GTP cyclohydrolase II NG828_03565 PF02580 D-Tyr-tRNA(Tyr) deacylase NG828_03570 PF04546 Sigma-70, non-essential region NG828_03570 PF03979 Sigma-70 factor, region 1.1 NG828_03570 PF00140 Sigma-70 factor, region 1.2 NG828_03570 PF04542 Sigma-70 region 2 NG828_03570 PF04539 Sigma-70 region 3 NG828_03570 PF04545 Sigma-70, region 4 NG828_03580 PF07690 Major Facilitator Superfamily NG828_03590 PF07971 Glycosyl hydrolase family 92 NG828_03590 PF17678 Glycosyl hydrolase family 92 N-terminal domain NG828_03595 PF00128 Alpha amylase, catalytic domain NG828_03595 PF11896 Domain of unknown function (DUF3416) NG828_03600 PF00128 Alpha amylase, catalytic domain NG828_03600 PF16657 Maltogenic Amylase, C-terminal domain NG828_03605 PF00128 Alpha amylase, catalytic domain NG828_03605 PF02806 Alpha amylase, C-terminal all-beta domain NG828_03605 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NG828_03630 PF01850 PIN domain NG828_03655 PF04542 Sigma-70 region 2 NG828_03655 PF04545 Sigma-70, region 4 NG828_03680 PF00356 Bacterial regulatory proteins, lacI family NG828_03690 PF07995 Glucose / Sorbosone dehydrogenase NG828_03695 PF00149 Calcineurin-like phosphoesterase NG828_03710 PF00873 AcrB/AcrD/AcrF family NG828_03715 PF00529 HlyD membrane-fusion protein of T1SS NG828_03715 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NG828_03720 PF00072 Response regulator receiver domain NG828_03720 PF00486 Transcriptional regulatory protein, C terminal NG828_03725 PF00672 HAMP domain NG828_03725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG828_03725 PF00512 His Kinase A (phospho-acceptor) domain NG828_03735 PF01292 Prokaryotic cytochrome b561 NG828_03740 PF00440 Bacterial regulatory proteins, tetR family NG828_03755 PF12706 Beta-lactamase superfamily domain NG828_03765 PF00701 Dihydrodipicolinate synthetase family NG828_03770 PF07690 Major Facilitator Superfamily NG828_03790 PF02203 Tar ligand binding domain homologue NG828_03790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG828_03790 PF00672 HAMP domain NG828_03795 PF05067 Manganese containing catalase NG828_03800 PF05974 Domain of unknown function (DUF892) NG828_03805 PF05974 Domain of unknown function (DUF892) NG828_03815 PF00440 Bacterial regulatory proteins, tetR family NG828_03820 PF00970 Oxidoreductase FAD-binding domain NG828_03820 PF00111 2Fe-2S iron-sulfur cluster binding domain NG828_03820 PF00175 Oxidoreductase NAD-binding domain NG828_03825 PF00487 Fatty acid desaturase NG828_03845 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NG828_03845 PF00205 Thiamine pyrophosphate enzyme, central domain NG828_03845 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NG828_03850 PF00512 His Kinase A (phospho-acceptor) domain NG828_03850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG828_03855 PF00072 Response regulator receiver domain NG828_03855 PF00158 Sigma-54 interaction domain NG828_03855 PF02954 Bacterial regulatory protein, Fis family NG828_03870 PF07690 Major Facilitator Superfamily NG828_03880 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NG828_03880 PF10414 Sirohaem synthase dimerisation region NG828_03880 PF14824 Sirohaem biosynthesis protein central NG828_03890 PF00128 Alpha amylase, catalytic domain NG828_03890 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NG828_03900 PF00128 Alpha amylase, catalytic domain NG828_03905 PF02446 4-alpha-glucanotransferase NG828_03910 PF00128 Alpha amylase, catalytic domain NG828_03910 PF11941 Domain of unknown function (DUF3459) NG828_03910 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NG828_03915 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NG828_03915 PF02806 Alpha amylase, C-terminal all-beta domain NG828_03915 PF00128 Alpha amylase, catalytic domain NG828_03920 PF00534 Glycosyl transferases group 1 NG828_03920 PF08323 Starch synthase catalytic domain NG828_03930 PF00072 Response regulator receiver domain NG828_03930 PF02954 Bacterial regulatory protein, Fis family NG828_03930 PF00158 Sigma-54 interaction domain NG828_03935 PF13188 PAS domain NG828_03935 PF00512 His Kinase A (phospho-acceptor) domain NG828_03935 PF08448 PAS fold NG828_03935 PF00072 Response regulator receiver domain NG828_03935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG828_03940 PF00857 Isochorismatase family NG828_03945 PF13632 Glycosyl transferase family group 2 NG828_03955 PF04397 LytTr DNA-binding domain NG828_03955 PF00072 Response regulator receiver domain NG828_03960 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain NG828_03960 PF03900 Porphobilinogen deaminase, C-terminal domain NG828_03975 PF01638 HxlR-like helix-turn-helix NG828_03990 PF00326 Prolyl oligopeptidase family NG828_03990 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NG828_04000 PF00155 Aminotransferase class I and II NG828_04005 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NG828_04005 PF00326 Prolyl oligopeptidase family NG828_04010 PF04304 Protein of unknown function (DUF454) NG828_04020 PF01678 Diaminopimelate epimerase NG828_04030 PF02899 Phage integrase, N-terminal SAM-like domain NG828_04030 PF00589 Phage integrase family NG828_04040 PF00227 Proteasome subunit NG828_04045 PF07724 AAA domain (Cdc48 subfamily) NG828_04045 PF10431 C-terminal, D2-small domain, of ClpB protein NG828_04045 PF00004 ATPase family associated with various cellular activities (AAA) NG828_04065 PF01209 ubiE/COQ5 methyltransferase family NG828_04075 PF11838 ERAP1-like C-terminal domain NG828_04075 PF01433 Peptidase family M1 domain NG828_04085 PF00561 alpha/beta hydrolase fold NG828_04085 PF00364 Biotin-requiring enzyme NG828_04100 PF13360 PQQ-like domain NG828_04105 PF00497 Bacterial extracellular solute-binding proteins, family 3 NG828_04110 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NG828_04110 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP NG828_04120 PF08240 Alcohol dehydrogenase GroES-like domain NG828_04120 PF00107 Zinc-binding dehydrogenase NG828_04130 PF01590 GAF domain NG828_04130 PF02954 Bacterial regulatory protein, Fis family NG828_04130 PF00158 Sigma-54 interaction domain NG828_04145 PF00294 pfkB family carbohydrate kinase NG828_04155 PF04085 rod shape-determining protein MreC NG828_04165 PF03717 Penicillin-binding Protein dimerisation domain NG828_04165 PF00905 Penicillin binding protein transpeptidase domain NG828_04170 PF01098 Cell cycle protein NG828_04180 PF00295 Glycosyl hydrolases family 28 NG828_04185 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NG828_04185 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NG828_04185 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch NG828_04190 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch NG828_04195 PF02233 NAD(P) transhydrogenase beta subunit NG828_04200 PF00171 Aldehyde dehydrogenase family NG828_04205 PF13406 Transglycosylase SLT domain NG828_04210 PF05036 Sporulation related domain NG828_04210 PF03330 Lytic transglycolase NG828_04215 PF07943 Penicillin-binding protein 5, C-terminal domain NG828_04215 PF00768 D-alanyl-D-alanine carboxypeptidase NG828_04225 PF04359 Protein of unknown function (DUF493) NG828_04230 PF03099 Biotin/lipoate A/B protein ligase family NG828_04235 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family NG828_04235 PF04055 Radical SAM superfamily NG828_04240 PF11818 C-terminal domain of tail specific protease (DUF3340) NG828_04240 PF00595 PDZ domain NG828_04240 PF03572 Peptidase family S41 NG828_04240 PF17804 Tail specific protease N-terminal domain NG828_04250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NG828_04250 PF03466 LysR substrate binding domain NG828_04260 PF07745 Glycosyl hydrolase family 53 NG828_04265 PF01467 Cytidylyltransferase-like NG828_04265 PF00293 NUDIX domain NG828_04280 PF01555 DNA methylase NG828_04295 PF08338 Domain of unknown function (DUF1731) NG828_04295 PF01370 NAD dependent epimerase/dehydratase family NG828_04305 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NG828_04305 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain NG828_04325 PF04972 BON domain NG828_04335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG828_04335 PF00512 His Kinase A (phospho-acceptor) domain NG828_04335 PF07689 KaiB domain NG828_04340 PF00072 Response regulator receiver domain NG828_04345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG828_04345 PF00512 His Kinase A (phospho-acceptor) domain NG828_04355 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NG828_04375 PF03330 Lytic transglycolase NG828_04385 PF00392 Bacterial regulatory proteins, gntR family NG828_04385 PF07702 UTRA domain NG828_04390 PF07690 Major Facilitator Superfamily NG828_04395 PF00356 Bacterial regulatory proteins, lacI family NG828_04400 PF01380 SIS domain NG828_04405 PF01979 Amidohydrolase family NG828_04415 PF01966 HD domain NG828_04415 PF01743 Poly A polymerase head domain NG828_04415 PF12627 Probable RNA and SrmB- binding site of polymerase A NG828_04420 PF01464 Transglycosylase SLT domain NG828_04420 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain NG828_04425 PF07715 TonB-dependent Receptor Plug Domain NG828_04425 PF00593 TonB dependent receptor NG828_04440 PF01323 DSBA-like thioredoxin domain NG828_04445 PF00034 Cytochrome c NG828_04450 PF01926 50S ribosome-binding GTPase NG828_04460 PF12833 Helix-turn-helix domain NG828_04470 PF04107 Glutamate-cysteine ligase family 2(GCS2) NG828_04495 PF01906 Putative heavy-metal-binding NG828_04500 PF00672 HAMP domain NG828_04500 PF00512 His Kinase A (phospho-acceptor) domain NG828_04500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG828_04505 PF00486 Transcriptional regulatory protein, C terminal NG828_04505 PF00072 Response regulator receiver domain NG828_04510 PF02583 Metal-sensitive transcriptional repressor NG828_04515 PF00107 Zinc-binding dehydrogenase NG828_04515 PF08240 Alcohol dehydrogenase GroES-like domain NG828_04520 PF04828 Glutathione-dependent formaldehyde-activating enzyme NG828_04525 PF00756 Putative esterase NG828_04530 PF00392 Bacterial regulatory proteins, gntR family NG828_04530 PF00155 Aminotransferase class I and II NG828_04535 PF02567 Phenazine biosynthesis-like protein NG828_04540 PF00892 EamA-like transporter family NG828_04550 PF02645 Uncharacterised protein, DegV family COG1307 NG828_04555 PF01323 DSBA-like thioredoxin domain NG828_04580 PF01979 Amidohydrolase family NG828_04580 PF00449 Urease alpha-subunit, N-terminal domain NG828_04585 PF01979 Amidohydrolase family NG828_04595 PF00462 Glutaredoxin NG828_04600 PF01522 Polysaccharide deacetylase NG828_04615 PF00155 Aminotransferase class I and II NG828_04620 PF03193 RsgA GTPase NG828_04650 PF00128 Alpha amylase, catalytic domain NG828_04665 PF00563 EAL domain NG828_04665 PF00990 Diguanylate cyclase, GGDEF domain NG828_04665 PF03707 Bacterial signalling protein N terminal repeat NG828_04670 PF00356 Bacterial regulatory proteins, lacI family NG828_04675 PF00106 short chain dehydrogenase NG828_04680 PF03600 Citrate transporter NG828_04690 PF00486 Transcriptional regulatory protein, C terminal NG828_04690 PF00072 Response regulator receiver domain NG828_04695 PF08521 Two-component sensor kinase N-terminal NG828_04695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG828_04695 PF00512 His Kinase A (phospho-acceptor) domain NG828_04705 PF07495 Y_Y_Y domain NG828_04705 PF00072 Response regulator receiver domain NG828_04705 PF07494 Two component regulator propeller NG828_04705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG828_04705 PF07495 Y_Y_Y domain NG828_04705 PF12833 Helix-turn-helix domain NG828_04705 PF00512 His Kinase A (phospho-acceptor) domain NG828_04705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG828_04705 PF00072 Response regulator receiver domain NG828_04705 PF12833 Helix-turn-helix domain NG828_04705 PF07494 Two component regulator propeller NG828_04705 PF00512 His Kinase A (phospho-acceptor) domain NG828_04710 PF00196 Bacterial regulatory proteins, luxR family NG828_04710 PF00072 Response regulator receiver domain NG828_04725 PF02743 Cache domain NG828_04725 PF00512 His Kinase A (phospho-acceptor) domain NG828_04725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG828_04735 PF00375 Sodium:dicarboxylate symporter family NG828_04740 PF00390 Malic enzyme, N-terminal domain NG828_04740 PF03949 Malic enzyme, NAD binding domain NG828_04740 PF01515 Phosphate acetyl/butaryl transferase NG828_04770 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) NG828_04775 PF02321 Outer membrane efflux protein NG828_04795 PF00501 AMP-binding enzyme NG828_04805 PF00106 short chain dehydrogenase NG828_04815 PF00486 Transcriptional regulatory protein, C terminal NG828_04815 PF00072 Response regulator receiver domain NG828_04820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG828_04820 PF00512 His Kinase A (phospho-acceptor) domain NG828_04825 PF00990 Diguanylate cyclase, GGDEF domain NG828_04830 PF00180 Isocitrate/isopropylmalate dehydrogenase NG828_04835 PF00694 Aconitase C-terminal domain NG828_04845 PF00330 Aconitase family (aconitate hydratase) NG828_04850 PF00682 HMGL-like NG828_04850 PF08502 LeuA allosteric (dimerisation) domain NG828_04855 PF00291 Pyridoxal-phosphate dependent enzyme NG828_04865 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NG828_04865 PF00205 Thiamine pyrophosphate enzyme, central domain NG828_04865 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NG828_04870 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain NG828_04870 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain NG828_04880 PF02028 BCCT, betaine/carnitine/choline family transporter NG828_04885 PF00672 HAMP domain NG828_04885 PF02203 Tar ligand binding domain homologue NG828_04885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG828_04890 PF01964 Radical SAM ThiC family NG828_04890 PF13667 ThiC-associated domain NG828_04900 PF07676 WD40-like Beta Propeller Repeat NG828_04900 PF00326 Prolyl oligopeptidase family NG828_04910 PF07715 TonB-dependent Receptor Plug Domain NG828_04910 PF00593 TonB dependent receptor NG828_04925 PF00719 Inorganic pyrophosphatase NG828_04935 PF03030 Inorganic H+ pyrophosphatase NG828_04950 PF00365 Phosphofructokinase NG828_04960 PF02875 Mur ligase family, glutamate ligase domain NG828_04960 PF08245 Mur ligase middle domain NG828_04960 PF01225 Mur ligase family, catalytic domain NG828_04975 PF09335 SNARE associated Golgi protein NG828_05000 PF00027 Cyclic nucleotide-binding domain NG828_05000 PF00520 Ion transport protein NG828_05005 PF00202 Aminotransferase class-III NG828_05015 PF00127 Copper binding proteins, plastocyanin/azurin family NG828_05020 PF00202 Aminotransferase class-III NG828_05025 PF02581 Thiamine monophosphate synthase NG828_05030 PF00301 Rubredoxin NG828_05035 PF13369 Transglutaminase-like superfamily NG828_05045 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) NG828_05055 PF01812 5-formyltetrahydrofolate cyclo-ligase family NG828_05070 PF05164 Cell division protein ZapA NG828_05080 PF03707 Bacterial signalling protein N terminal repeat NG828_05080 PF00990 Diguanylate cyclase, GGDEF domain NG828_05080 PF00563 EAL domain NG828_05085 PF03695 Uncharacterised protein family (UPF0149) NG828_05090 PF00557 Metallopeptidase family M24 NG828_05090 PF05195 Aminopeptidase P, N-terminal domain NG828_05100 PF00557 Metallopeptidase family M24 NG828_05115 PF06969 HemN C-terminal domain NG828_05115 PF04055 Radical SAM superfamily NG828_05120 PF01725 Ham1 family NG828_05125 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NG828_05130 PF03725 3' exoribonuclease family, domain 2 NG828_05130 PF01138 3' exoribonuclease family, domain 1 NG828_05135 PF03755 YicC-like family, N-terminal region NG828_05135 PF08340 Domain of unknown function (DUF1732) NG828_05145 PF02472 Biopolymer transport protein ExbD/TolR NG828_05150 PF01618 MotA/TolQ/ExbB proton channel family NG828_05155 PF04304 Protein of unknown function (DUF454) NG828_05160 PF01126 Heme oxygenase NG828_05180 PF16220 Domain of unknown function (DUF4880) NG828_05180 PF04773 FecR protein NG828_05190 PF00625 Guanylate kinase NG828_05195 PF01192 RNA polymerase Rpb6 NG828_05200 PF13291 ACT domain NG828_05200 PF04607 Region found in RelA / SpoT proteins NG828_05200 PF02824 TGS domain NG828_05205 PF01042 Endoribonuclease L-PSP NG828_05210 PF17191 RecG wedge domain NG828_05210 PF00270 DEAD/DEAH box helicase NG828_05210 PF00271 Helicase conserved C-terminal domain NG828_05215 PF01156 Inosine-uridine preferring nucleoside hydrolase NG828_05220 PF01197 Ribosomal protein L31 NG828_05225 PF00285 Citrate synthase, C-terminal domain NG828_05235 PF17092 Penicillin-binding protein OB-like domain NG828_05235 PF00912 Transglycosylase NG828_05235 PF00905 Penicillin binding protein transpeptidase domain NG828_05240 PF11104 Type IV pilus assembly protein PilM; NG828_05250 PF04350 Pilus assembly protein, PilO NG828_05255 PF04351 Pilus assembly protein, PilP NG828_05260 PF11741 AMIN domain NG828_05260 PF00263 Bacterial type II and III secretion system protein NG828_05260 PF03958 Bacterial type II/III secretion system short domain NG828_05260 PF07660 Secretin and TonB N terminus short domain NG828_05265 PF07726 ATPase family associated with various cellular activities (AAA) NG828_05265 PF17863 AAA lid domain NG828_05270 PF01882 Protein of unknown function DUF58 NG828_05280 PF13519 von Willebrand factor type A domain NG828_05295 PF00375 Sodium:dicarboxylate symporter family NG828_05300 PF02779 Transketolase, pyrimidine binding domain NG828_05300 PF02780 Transketolase, C-terminal domain NG828_05300 PF00456 Transketolase, thiamine diphosphate binding domain NG828_05345 PF03965 Penicillinase repressor NG828_05350 PF03544 Gram-negative bacterial TonB protein C-terminal NG828_05365 PF03459 TOBE domain NG828_05365 PF00005 ABC transporter NG828_05370 PF00528 Binding-protein-dependent transport system inner membrane component NG828_05380 PF04273 Putative phosphatase (DUF442) NG828_05380 PF00753 Metallo-beta-lactamase superfamily NG828_05385 PF01022 Bacterial regulatory protein, arsR family NG828_05410 PF00085 Thioredoxin NG828_05420 PF03922 OmpW family NG828_05425 PF03922 OmpW family NG828_05430 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NG828_05430 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NG828_05445 PF00672 HAMP domain NG828_05445 PF02743 Cache domain NG828_05445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG828_05460 PF00162 Phosphoglycerate kinase NG828_05465 PF13419 Haloacid dehalogenase-like hydrolase NG828_05470 PF00224 Pyruvate kinase, barrel domain NG828_05470 PF02887 Pyruvate kinase, alpha/beta domain NG828_05480 PF00274 Fructose-bisphosphate aldolase class-I NG828_05485 PF00072 Response regulator receiver domain NG828_05485 PF00486 Transcriptional regulatory protein, C terminal NG828_05490 PF00512 His Kinase A (phospho-acceptor) domain NG828_05490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG828_05490 PF00672 HAMP domain NG828_05500 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB NG828_05500 PF08479 POTRA domain, ShlB-type NG828_05505 PF01661 Macro domain NG828_05520 PF01156 Inosine-uridine preferring nucleoside hydrolase NG828_05530 PF00291 Pyridoxal-phosphate dependent enzyme NG828_05535 PF10414 Sirohaem synthase dimerisation region NG828_05535 PF14824 Sirohaem biosynthesis protein central NG828_05535 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NG828_05540 PF03466 LysR substrate binding domain NG828_05540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NG828_05550 PF00672 HAMP domain NG828_05550 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB NG828_05550 PF08448 PAS fold NG828_05550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG828_05550 PF00512 His Kinase A (phospho-acceptor) domain NG828_05555 PF03960 ArsC family NG828_05575 PF01507 Phosphoadenosine phosphosulfate reductase family NG828_05580 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NG828_05580 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NG828_05585 PF00175 Oxidoreductase NAD-binding domain NG828_05585 PF00667 FAD binding domain NG828_05585 PF00258 Flavodoxin NG828_05590 PF01507 Phosphoadenosine phosphosulfate reductase family NG828_05595 PF00009 Elongation factor Tu GTP binding domain NG828_05600 PF01433 Peptidase family M1 domain NG828_05600 PF11838 ERAP1-like C-terminal domain NG828_05605 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NG828_05610 PF00873 AcrB/AcrD/AcrF family NG828_05615 PF13439 Glycosyltransferase Family 4 NG828_05615 PF00534 Glycosyl transferases group 1 NG828_05625 PF13302 Acetyltransferase (GNAT) domain NG828_05640 PF08032 RNA 2'-O ribose methyltransferase substrate binding NG828_05640 PF00588 SpoU rRNA Methylase family NG828_05660 PF00356 Bacterial regulatory proteins, lacI family NG828_05665 PF02225 PA domain NG828_05665 PF04389 Peptidase family M28 NG828_05670 PF01741 Large-conductance mechanosensitive channel, MscL NG828_05675 PF01557 Fumarylacetoacetate (FAA) hydrolase family NG828_05690 PF03600 Citrate transporter NG828_05690 PF02080 TrkA-C domain NG828_05695 PF02390 Putative methyltransferase NG828_05700 PF05690 Thiazole biosynthesis protein ThiG NG828_05730 PF05506 Domain of unknown function (DUF756) NG828_05730 PF04185 Phosphoesterase family NG828_05735 PF00593 TonB dependent receptor NG828_05735 PF07660 Secretin and TonB N terminus short domain NG828_05735 PF07715 TonB-dependent Receptor Plug Domain NG828_05740 PF08443 RimK-like ATP-grasp domain NG828_05740 PF18030 RimK PreATP-grasp domain NG828_05750 PF00072 Response regulator receiver domain NG828_05750 PF00486 Transcriptional regulatory protein, C terminal NG828_05755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG828_05755 PF11808 Phosphate regulon sensor protein PhoR NG828_05755 PF00989 PAS fold NG828_05755 PF00512 His Kinase A (phospho-acceptor) domain NG828_05760 PF01121 Dephospho-CoA kinase NG828_05765 PF06750 Bacterial Peptidase A24 N-terminal domain NG828_05765 PF01478 Type IV leader peptidase family NG828_05770 PF00482 Type II secretion system (T2SS), protein F NG828_05775 PF00114 Pilin (bacterial filament) NG828_05775 PF07963 Prokaryotic N-terminal methylation motif NG828_05805 PF08241 Methyltransferase domain NG828_05810 PF00535 Glycosyl transferase family 2 NG828_05815 PF00437 Type II/IV secretion system protein NG828_05815 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NG828_05820 PF02954 Bacterial regulatory protein, Fis family NG828_05820 PF00158 Sigma-54 interaction domain NG828_05820 PF00072 Response regulator receiver domain NG828_05825 PF00512 His Kinase A (phospho-acceptor) domain NG828_05825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG828_05830 PF00549 CoA-ligase NG828_05830 PF08442 ATP-grasp domain NG828_05835 PF02629 CoA binding domain NG828_05835 PF00549 CoA-ligase NG828_05840 PF01011 PQQ enzyme repeat NG828_05845 PF00795 Carbon-nitrogen hydrolase NG828_05845 PF02540 NAD synthase NG828_05855 PF12867 DinB superfamily NG828_05855 PF03781 Sulfatase-modifying factor enzyme 1 NG828_05865 PF00528 Binding-protein-dependent transport system inner membrane component NG828_05870 PF00005 ABC transporter NG828_05880 PF13525 Outer membrane lipoprotein NG828_05885 PF00849 RNA pseudouridylate synthase NG828_05890 PF02578 Multi-copper polyphenol oxidoreductase laccase NG828_05910 PF00672 HAMP domain NG828_05910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG828_05910 PF02203 Tar ligand binding domain homologue NG828_05915 PF00982 Glycosyltransferase family 20 NG828_05920 PF00723 Glycosyl hydrolases family 15 NG828_05925 PF02358 Trehalose-phosphatase NG828_05930 PF07715 TonB-dependent Receptor Plug Domain NG828_05930 PF00593 TonB dependent receptor NG828_05965 PF00004 ATPase family associated with various cellular activities (AAA) NG828_05965 PF07724 AAA domain (Cdc48 subfamily) NG828_05965 PF17871 AAA lid domain NG828_05965 PF02861 Clp amino terminal domain, pathogenicity island component NG828_05965 PF10431 C-terminal, D2-small domain, of ClpB protein NG828_05980 PF01053 Cys/Met metabolism PLP-dependent enzyme NG828_05990 PF07690 Major Facilitator Superfamily NG828_06000 PF07769 psiF repeat NG828_06005 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NG828_06005 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NG828_06010 PF06276 Ferric iron reductase FhuF-like transporter NG828_06010 PF04183 IucA / IucC family NG828_06015 PF07690 Major Facilitator Superfamily NG828_06030 PF07715 TonB-dependent Receptor Plug Domain NG828_06030 PF00593 TonB dependent receptor NG828_06030 PF07660 Secretin and TonB N terminus short domain NG828_06035 PF03328 HpcH/HpaI aldolase/citrate lyase family NG828_06040 PF00999 Sodium/hydrogen exchanger family NG828_06040 PF02254 TrkA-N domain NG828_06060 PF07715 TonB-dependent Receptor Plug Domain NG828_06060 PF00593 TonB dependent receptor NG828_06075 PF12848 ABC transporter NG828_06075 PF00005 ABC transporter NG828_06085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NG828_06085 PF03466 LysR substrate binding domain NG828_06095 PF07859 alpha/beta hydrolase fold NG828_06095 PF13472 GDSL-like Lipase/Acylhydrolase family NG828_06100 PF05506 Domain of unknown function (DUF756) NG828_06100 PF04185 Phosphoesterase family NG828_06120 PF00152 tRNA synthetases class II (D, K and N) NG828_06120 PF02938 GAD domain NG828_06120 PF01336 OB-fold nucleic acid binding domain NG828_06150 PF01709 Transcriptional regulator NG828_06155 PF02075 Crossover junction endodeoxyribonuclease RuvC NG828_06160 PF07499 RuvA, C-terminal domain NG828_06160 PF01330 RuvA N terminal domain NG828_06165 PF02705 K+ potassium transporter NG828_06170 PF17864 RuvB AAA lid domain NG828_06170 PF05491 RuvB C-terminal winged helix domain NG828_06170 PF05496 Holliday junction DNA helicase RuvB P-loop domain NG828_06175 PF03061 Thioesterase superfamily NG828_06180 PF01618 MotA/TolQ/ExbB proton channel family NG828_06185 PF02472 Biopolymer transport protein ExbD/TolR NG828_06195 PF07676 WD40-like Beta Propeller Repeat NG828_06195 PF04052 TolB amino-terminal domain NG828_06200 PF00691 OmpA family NG828_06210 PF04055 Radical SAM superfamily NG828_06215 PF06508 Queuosine biosynthesis protein QueC NG828_06230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NG828_06230 PF03466 LysR substrate binding domain NG828_06245 PF00270 DEAD/DEAH box helicase NG828_06245 PF00271 Helicase conserved C-terminal domain NG828_06245 PF00570 HRDC domain NG828_06245 PF16124 RecQ zinc-binding NG828_06245 PF09382 RQC domain NG828_06250 PF00210 Ferritin-like domain NG828_06255 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold NG828_06255 PF11898 Domain of unknown function (DUF3418) NG828_06255 PF04408 Helicase associated domain (HA2) NG828_06255 PF00270 DEAD/DEAH box helicase NG828_06255 PF00271 Helicase conserved C-terminal domain NG828_06260 PF00654 Voltage gated chloride channel NG828_06270 PF04055 Radical SAM superfamily NG828_06270 PF13186 Iron-sulfur cluster-binding domain NG828_06275 PF05402 Coenzyme PQQ synthesis protein D (PqqD) NG828_06280 PF03070 TENA/THI-4/PQQC family NG828_06285 PF12706 Beta-lactamase superfamily domain NG828_06295 PF02824 TGS domain NG828_06295 PF04607 Region found in RelA / SpoT proteins NG828_06295 PF13291 ACT domain NG828_06305 PF00535 Glycosyl transferase family 2 NG828_06310 PF00912 Transglycosylase NG828_06310 PF00905 Penicillin binding protein transpeptidase domain NG828_06310 PF14814 Bifunctional transglycosylase second domain NG828_06320 PF04851 Type III restriction enzyme, res subunit NG828_06320 PF13307 Helicase C-terminal domain NG828_06325 PF00814 Glycoprotease family NG828_06330 PF03747 ADP-ribosylglycohydrolase NG828_06335 PF00593 TonB dependent receptor NG828_06345 PF02951 Prokaryotic glutathione synthetase, N-terminal domain NG828_06345 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain NG828_06350 PF00072 Response regulator receiver domain NG828_06355 PF00072 Response regulator receiver domain NG828_06360 PF01584 CheW-like domain NG828_06365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG828_06365 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term NG828_06370 PF01584 CheW-like domain NG828_06370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG828_06370 PF01627 Hpt domain NG828_06370 PF00072 Response regulator receiver domain NG828_06375 PF01339 CheB methylesterase NG828_06375 PF00072 Response regulator receiver domain NG828_06420 PF01112 Asparaginase NG828_06425 PF03932 CutC family NG828_06465 PF01638 HxlR-like helix-turn-helix NG828_06470 PF00107 Zinc-binding dehydrogenase NG828_06470 PF08240 Alcohol dehydrogenase GroES-like domain NG828_06520 PF01301 Glycosyl hydrolases family 35 NG828_06525 PF17678 Glycosyl hydrolase family 92 N-terminal domain NG828_06525 PF07971 Glycosyl hydrolase family 92 NG828_06535 PF02056 Family 4 glycosyl hydrolase NG828_06535 PF11975 Family 4 glycosyl hydrolase C-terminal domain NG828_06545 PF13520 Amino acid permease NG828_06550 PF01301 Glycosyl hydrolases family 35 NG828_06560 PF07691 PA14 domain NG828_06560 PF01915 Glycosyl hydrolase family 3 C-terminal domain NG828_06560 PF00933 Glycosyl hydrolase family 3 N terminal domain NG828_06560 PF14310 Fibronectin type III-like domain NG828_06570 PF00728 Glycosyl hydrolase family 20, catalytic domain NG828_06570 PF02838 Glycosyl hydrolase family 20, domain 2 NG828_06570 PF07691 PA14 domain NG828_06575 PF00704 Glycosyl hydrolases family 18 NG828_06575 PF01476 LysM domain NG828_06590 PF02685 Glucokinase NG828_06595 PF04452 RNA methyltransferase NG828_06600 PF00202 Aminotransferase class-III NG828_06605 PF00293 NUDIX domain NG828_06610 PF00459 Inositol monophosphatase family NG828_06615 PF03819 MazG nucleotide pyrophosphohydrolase domain NG828_06620 PF02694 Uncharacterised BCR, YnfA/UPF0060 family NG828_06630 PF01145 SPFH domain / Band 7 family NG828_06630 PF16200 C-terminal region of band_7 NG828_06640 PF01571 Aminomethyltransferase folate-binding domain NG828_06640 PF08669 Glycine cleavage T-protein C-terminal barrel domain NG828_06645 PF01597 Glycine cleavage H-protein NG828_06665 PF05199 GMC oxidoreductase NG828_06665 PF00732 GMC oxidoreductase NG828_06685 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NG828_06685 PF02770 Acyl-CoA dehydrogenase, middle domain NG828_06685 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NG828_06685 PF09317 Domain of unknown function (DUF1974) NG828_06695 PF00440 Bacterial regulatory proteins, tetR family NG828_06710 PF13181 Tetratricopeptide repeat NG828_06715 PF07715 TonB-dependent Receptor Plug Domain NG828_06715 PF00593 TonB dependent receptor NG828_06725 PF01430 Hsp33 protein NG828_06730 PF00912 Transglycosylase NG828_06735 PF00535 Glycosyl transferase family 2 NG828_06740 PF00571 CBS domain NG828_06750 PF03006 Haemolysin-III related NG828_06755 PF16658 Class II release factor RF3, C-terminal domain NG828_06755 PF00009 Elongation factor Tu GTP binding domain NG828_06765 PF00005 ABC transporter NG828_06770 PF00392 Bacterial regulatory proteins, gntR family NG828_06775 PF08525 Opacity-associated protein A N-terminal motif NG828_06775 PF01551 Peptidase family M23 NG828_06775 PF01476 LysM domain NG828_06780 PF00561 alpha/beta hydrolase fold NG828_06785 PF01053 Cys/Met metabolism PLP-dependent enzyme NG828_06790 PF00742 Homoserine dehydrogenase NG828_06790 PF03447 Homoserine dehydrogenase, NAD binding domain NG828_06790 PF00696 Amino acid kinase family NG828_06795 PF00553 Cellulose binding domain NG828_06795 PF00041 Fibronectin type III domain NG828_06795 PF00704 Glycosyl hydrolases family 18 NG828_06805 PF00561 alpha/beta hydrolase fold NG828_06805 PF08386 TAP-like protein NG828_06810 PF00990 Diguanylate cyclase, GGDEF domain NG828_06815 PF03315 Serine dehydratase beta chain NG828_06815 PF03313 Serine dehydratase alpha chain NG828_06830 PF01292 Prokaryotic cytochrome b561 NG828_06835 PF04264 YceI-like domain NG828_06840 PF00672 HAMP domain NG828_06840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG828_06840 PF00512 His Kinase A (phospho-acceptor) domain NG828_06840 PF01627 Hpt domain NG828_06840 PF00072 Response regulator receiver domain NG828_06840 PF17149 Periplasmic sensor domain found in signal transduction proteins NG828_06845 PF00072 Response regulator receiver domain NG828_06845 PF00512 His Kinase A (phospho-acceptor) domain NG828_06845 PF01627 Hpt domain NG828_06845 PF17149 Periplasmic sensor domain found in signal transduction proteins NG828_06845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG828_06845 PF00672 HAMP domain NG828_06850 PF07690 Major Facilitator Superfamily NG828_06860 PF01208 Uroporphyrinogen decarboxylase (URO-D) NG828_06870 PF01965 DJ-1/PfpI family NG828_06870 PF12833 Helix-turn-helix domain NG828_06875 PF00857 Isochorismatase family NG828_06885 PF13533 Biotin-lipoyl like NG828_06890 PF00873 AcrB/AcrD/AcrF family NG828_06895 PF02321 Outer membrane efflux protein NG828_06900 PF07859 alpha/beta hydrolase fold NG828_06910 PF01761 3-dehydroquinate synthase NG828_06915 PF01202 Shikimate kinase NG828_06920 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region NG828_06920 PF01243 Pyridoxamine 5'-phosphate oxidase NG828_06935 PF07690 Major Facilitator Superfamily NG828_06940 PF00376 MerR family regulatory protein NG828_06940 PF09278 MerR, DNA binding NG828_06950 PF03807 NADP oxidoreductase coenzyme F420-dependent NG828_06950 PF14748 Pyrroline-5-carboxylate reductase dimerisation NG828_06960 PF01168 Alanine racemase, N-terminal domain NG828_06965 PF00437 Type II/IV secretion system protein NG828_06970 PF00437 Type II/IV secretion system protein NG828_06980 PF00990 Diguanylate cyclase, GGDEF domain NG828_06980 PF17151 Periplasmic sensor domain NG828_07005 PF18417 L-lysine epsilon oxidase C-terminal domain NG828_07005 PF17990 L-Lysine epsilon oxidase N-terminal NG828_07020 PF13673 Acetyltransferase (GNAT) domain NG828_07020 PF00117 Glutamine amidotransferase class-I NG828_07020 PF13302 Acetyltransferase (GNAT) domain NG828_07020 PF03352 Methyladenine glycosylase NG828_07020 PF00958 GMP synthase C terminal domain NG828_07030 PF02622 Uncharacterized ACR, COG1678 NG828_07035 PF03652 Holliday junction resolvase NG828_07040 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NG828_07040 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NG828_07050 PF00544 Pectate lyase NG828_07055 PF00672 HAMP domain NG828_07055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG828_07055 PF02203 Tar ligand binding domain homologue NG828_07060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG828_07060 PF02203 Tar ligand binding domain homologue NG828_07060 PF00672 HAMP domain NG828_07075 PF00324 Amino acid permease NG828_07080 PF03600 Citrate transporter NG828_07100 PF03448 MgtE intracellular N domain NG828_07100 PF01769 Divalent cation transporter NG828_07100 PF00571 CBS domain NG828_07105 PF02896 PEP-utilising enzyme, TIM barrel domain NG828_07105 PF00391 PEP-utilising enzyme, mobile domain NG828_07105 PF05524 PEP-utilising enzyme, N-terminal NG828_07110 PF00381 PTS HPr component phosphorylation site NG828_07120 PF03668 P-loop ATPase protein family NG828_07125 PF07475 HPr Serine kinase C-terminal domain NG828_07125 PF02603 HPr Serine kinase N terminus NG828_07130 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NG828_07135 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NG828_07140 PF00309 Sigma-54 factor, Activator interacting domain (AID) NG828_07140 PF04963 Sigma-54 factor, core binding domain NG828_07140 PF04552 Sigma-54, DNA binding domain NG828_07150 PF00005 ABC transporter NG828_07150 PF12399 Branched-chain amino acid ATP-binding cassette transporter NG828_07170 PF00571 CBS domain NG828_07170 PF01380 SIS domain NG828_07180 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NG828_07200 PF00551 Formyl transferase NG828_07215 PF00586 AIR synthase related protein, N-terminal domain NG828_07215 PF02769 AIR synthase related protein, C-terminal domain NG828_07225 PF01594 AI-2E family transporter NG828_07230 PF00308 Bacterial dnaA protein NG828_07235 PF00483 Nucleotidyl transferase NG828_07240 PF01636 Phosphotransferase enzyme family NG828_07265 PF00072 Response regulator receiver domain NG828_07265 PF00486 Transcriptional regulatory protein, C terminal NG828_07270 PF02424 ApbE family NG828_07275 PF13640 2OG-Fe(II) oxygenase superfamily NG828_07275 PF18331 PKHD-type hydroxylase C-terminal domain NG828_07280 PF07715 TonB-dependent Receptor Plug Domain NG828_07280 PF00593 TonB dependent receptor NG828_07285 PF00202 Aminotransferase class-III NG828_07295 PF02547 Queuosine biosynthesis protein NG828_07340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NG828_07340 PF03466 LysR substrate binding domain NG828_07385 PF03653 Uncharacterised protein family (UPF0093) NG828_07395 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit NG828_07405 PF01336 OB-fold nucleic acid binding domain NG828_07405 PF02811 PHP domain NG828_07405 PF14579 Helix-hairpin-helix motif NG828_07405 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NG828_07405 PF07733 Bacterial DNA polymerase III alpha NTPase domain NG828_07410 PF01351 Ribonuclease HII NG828_07415 PF02684 Lipid-A-disaccharide synthetase NG828_07420 PF00132 Bacterial transferase hexapeptide (six repeats) NG828_07420 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 NG828_07425 PF07977 FabA-like domain NG828_07430 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD NG828_07430 PF00132 Bacterial transferase hexapeptide (six repeats) NG828_07435 PF01103 Surface antigen NG828_07435 PF07244 Surface antigen variable number repeat NG828_07440 PF17820 PDZ domain NG828_07440 PF02163 Peptidase family M50 NG828_07445 PF13288 DXP reductoisomerase C-terminal domain NG828_07445 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase NG828_07445 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain NG828_07455 PF01255 Putative undecaprenyl diphosphate synthase NG828_07460 PF01765 Ribosome recycling factor NG828_07465 PF00696 Amino acid kinase family NG828_07470 PF00990 Diguanylate cyclase, GGDEF domain NG828_07475 PF00889 Elongation factor TS NG828_07480 PF00318 Ribosomal protein S2 NG828_07515 PF00557 Metallopeptidase family M24 NG828_07520 PF08335 GlnD PII-uridylyltransferase NG828_07520 PF01909 Nucleotidyltransferase domain NG828_07520 PF01966 HD domain NG828_07525 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal NG828_07525 PF14602 Hexapeptide repeat of succinyl-transferase NG828_07525 PF00132 Bacterial transferase hexapeptide (six repeats) NG828_07540 PF03960 ArsC family NG828_07550 PF07687 Peptidase dimerisation domain NG828_07550 PF01546 Peptidase family M20/M25/M40 NG828_07555 PF13537 Glutamine amidotransferase domain NG828_07555 PF00733 Asparagine synthase NG828_07565 PF00990 Diguanylate cyclase, GGDEF domain NG828_07565 PF17151 Periplasmic sensor domain NG828_07570 PF00990 Diguanylate cyclase, GGDEF domain NG828_07580 PF01804 Penicillin amidase NG828_07585 PF00210 Ferritin-like domain NG828_07605 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NG828_07605 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NG828_07615 PF00202 Aminotransferase class-III NG828_07630 PF00171 Aldehyde dehydrogenase family NG828_07640 PF03989 DNA gyrase C-terminal domain, beta-propeller NG828_07640 PF00521 DNA gyrase/topoisomerase IV, subunit A NG828_07650 PF01047 MarR family NG828_07655 PF02321 Outer membrane efflux protein NG828_07660 PF00529 HlyD membrane-fusion protein of T1SS NG828_07660 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NG828_07665 PF07690 Major Facilitator Superfamily NG828_07690 PF06903 VirK protein NG828_07700 PF00575 S1 RNA binding domain NG828_07700 PF00773 RNB domain NG828_07700 PF08206 Ribonuclease B OB domain NG828_07700 PF08461 Ribonuclease R winged-helix domain NG828_07700 PF17876 Cold shock domain NG828_07710 PF08032 RNA 2'-O ribose methyltransferase substrate binding NG828_07710 PF00588 SpoU rRNA Methylase family NG828_07715 PF00990 Diguanylate cyclase, GGDEF domain NG828_07715 PF00072 Response regulator receiver domain NG828_07730 PF00929 Exonuclease NG828_07740 PF05114 Protein of unknown function (DUF692) NG828_07750 PF01895 PhoU domain NG828_07755 PF00005 ABC transporter NG828_07760 PF00528 Binding-protein-dependent transport system inner membrane component NG828_07765 PF00528 Binding-protein-dependent transport system inner membrane component NG828_07770 PF12849 PBP superfamily domain NG828_07775 PF12849 PBP superfamily domain NG828_07790 PF00484 Carbonic anhydrase NG828_07795 PF01740 STAS domain NG828_07795 PF00916 Sulfate permease family NG828_07805 PF00730 HhH-GPD superfamily base excision DNA repair protein NG828_07805 PF10576 Iron-sulfur binding domain of endonuclease III NG828_07805 PF00633 Helix-hairpin-helix motif NG828_07815 PF00378 Enoyl-CoA hydratase/isomerase NG828_07820 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NG828_07820 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NG828_07825 PF00293 NUDIX domain NG828_07830 PF00581 Rhodanese-like domain NG828_07860 PF00005 ABC transporter NG828_07860 PF12848 ABC transporter NG828_07865 PF01170 Putative RNA methylase family UPF0020 NG828_07865 PF02926 THUMP domain NG828_07865 PF10672 S-adenosylmethionine-dependent methyltransferase NG828_07870 PF00072 Response regulator receiver domain NG828_07875 PF00672 HAMP domain NG828_07875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG828_07875 PF00512 His Kinase A (phospho-acceptor) domain NG828_07875 PF01627 Hpt domain NG828_07875 PF00072 Response regulator receiver domain NG828_07875 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NG828_07880 PF04286 Protein of unknown function (DUF445) NG828_07895 PF00171 Aldehyde dehydrogenase family NG828_07900 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NG828_07900 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NG828_07905 PF00202 Aminotransferase class-III NG828_07910 PF07883 Cupin domain NG828_07910 PF01381 Helix-turn-helix NG828_07915 PF00171 Aldehyde dehydrogenase family NG828_07930 PF02634 FdhD/NarQ family NG828_07935 PF00384 Molybdopterin oxidoreductase NG828_07945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG828_07945 PF00512 His Kinase A (phospho-acceptor) domain NG828_07945 PF01627 Hpt domain NG828_07945 PF00072 Response regulator receiver domain NG828_07945 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NG828_07945 PF00672 HAMP domain NG828_07950 PF00072 Response regulator receiver domain NG828_07950 PF00990 Diguanylate cyclase, GGDEF domain NG828_07955 PF07690 Major Facilitator Superfamily NG828_07955 PF00083 Sugar (and other) transporter NG828_07960 PF00072 Response regulator receiver domain NG828_07960 PF00990 Diguanylate cyclase, GGDEF domain NG828_07965 PF01266 FAD dependent oxidoreductase NG828_07970 PF00120 Glutamine synthetase, catalytic domain NG828_07975 PF07722 Peptidase C26 NG828_07980 PF00120 Glutamine synthetase, catalytic domain NG828_07985 PF00202 Aminotransferase class-III NG828_07990 PF13416 Bacterial extracellular solute-binding protein NG828_07995 PF13533 Biotin-lipoyl like NG828_08000 PF07690 Major Facilitator Superfamily NG828_08005 PF02321 Outer membrane efflux protein NG828_08010 PF08402 TOBE domain NG828_08010 PF00005 ABC transporter NG828_08015 PF00528 Binding-protein-dependent transport system inner membrane component NG828_08020 PF00528 Binding-protein-dependent transport system inner membrane component NG828_08025 PF00171 Aldehyde dehydrogenase family NG828_08040 PF03471 Transporter associated domain NG828_08040 PF00571 CBS domain NG828_08055 PF02130 Uncharacterized protein family UPF0054 NG828_08070 PF02562 PhoH-like protein NG828_08090 PF01938 TRAM domain NG828_08090 PF04055 Radical SAM superfamily NG828_08090 PF00919 Uncharacterized protein family UPF0004 NG828_08105 PF01464 Transglycosylase SLT domain NG828_08110 PF00355 Rieske [2Fe-2S] domain NG828_08110 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal NG828_08115 PF00032 Cytochrome b(C-terminal)/b6/petD NG828_08115 PF00033 Cytochrome b/b6/petB NG828_08120 PF02167 Cytochrome C1 family NG828_08125 PF00043 Glutathione S-transferase, C-terminal domain NG828_08125 PF02798 Glutathione S-transferase, N-terminal domain NG828_08130 PF04386 Stringent starvation protein B NG828_08145 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain NG828_08145 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain NG828_08155 PF00731 AIR carboxylase NG828_08160 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain NG828_08160 PF02222 ATP-grasp domain NG828_08165 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NG828_08165 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NG828_08170 PF00462 Glutaredoxin NG828_08175 PF00106 short chain dehydrogenase NG828_08180 PF01914 MarC family integral membrane protein NG828_08185 PF00593 TonB dependent receptor NG828_08190 PF03641 Possible lysine decarboxylase NG828_08190 PF11892 Domain of unknown function (DUF3412) NG828_08190 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases NG828_08195 PF06580 Histidine kinase NG828_08195 PF07694 5TMR of 5TMR-LYT NG828_08220 PF05567 Neisseria PilC beta-propeller domain NG828_08225 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor NG828_08225 PF07963 Prokaryotic N-terminal methylation motif NG828_08235 PF07963 Prokaryotic N-terminal methylation motif NG828_08235 PF00114 Pilin (bacterial filament) NG828_08240 PF00271 Helicase conserved C-terminal domain NG828_08240 PF04851 Type III restriction enzyme, res subunit NG828_08240 PF02151 UvrB/uvrC motif NG828_08240 PF12344 Ultra-violet resistance protein B NG828_08240 PF17757 UvrB interaction domain NG828_08255 PF02534 Type IV secretory system Conjugative DNA transfer NG828_08270 PF04335 VirB8 protein NG828_08280 PF03743 Bacterial conjugation TrbI-like protein NG828_08285 PF00437 Type II/IV secretion system protein NG828_08295 PF04956 TrbC/VIRB2 family NG828_08300 PF05101 Type IV secretory pathway, VirB3-like protein NG828_08305 PF03135 CagE, TrbE, VirB family, component of type IV transporter system NG828_08340 PF00128 Alpha amylase, catalytic domain NG828_08350 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation NG828_08350 PF14508 Glycosyl-hydrolase 97 N-terminal NG828_08350 PF10566 Glycoside hydrolase 97 NG828_08365 PF00128 Alpha amylase, catalytic domain NG828_08365 PF00686 Starch binding domain NG828_08370 PF00356 Bacterial regulatory proteins, lacI family NG828_08375 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NG828_08375 PF02824 TGS domain NG828_08375 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NG828_08375 PF03129 Anticodon binding domain NG828_08380 PF00707 Translation initiation factor IF-3, C-terminal domain NG828_08380 PF05198 Translation initiation factor IF-3, N-terminal domain NG828_08385 PF01632 Ribosomal protein L35 NG828_08390 PF00453 Ribosomal protein L20 NG828_08395 PF01409 tRNA synthetases class II core domain (F) NG828_08395 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain NG828_08400 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain NG828_08400 PF01588 Putative tRNA binding domain NG828_08400 PF03147 Ferredoxin-fold anticodon binding domain NG828_08400 PF03483 B3/4 domain NG828_08400 PF03484 tRNA synthetase B5 domain NG828_08405 PF00216 Bacterial DNA-binding protein NG828_08410 PF13411 MerR HTH family regulatory protein NG828_08430 PF02397 Bacterial sugar transferase NG828_08445 PF13439 Glycosyltransferase Family 4 NG828_08445 PF00534 Glycosyl transferases group 1 NG828_08455 PF14667 Polysaccharide biosynthesis C-terminal domain NG828_08470 PF03808 Glycosyl transferase WecB/TagA/CpsF family NG828_08485 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NG828_08485 PF02779 Transketolase, pyrimidine binding domain NG828_08485 PF02780 Transketolase, C-terminal domain NG828_08495 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NG828_08495 PF12806 Acetyl-CoA dehydrogenase C-terminal like NG828_08495 PF02770 Acyl-CoA dehydrogenase, middle domain NG828_08495 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NG828_08500 PF00072 Response regulator receiver domain NG828_08500 PF00196 Bacterial regulatory proteins, luxR family NG828_08505 PF17200 Single Cache domain 2 NG828_08505 PF07730 Histidine kinase NG828_08510 PF03793 PASTA domain NG828_08510 PF00069 Protein kinase domain NG828_08525 PF00082 Subtilase family NG828_08530 PF00082 Subtilase family NG828_08535 PF13533 Biotin-lipoyl like NG828_08545 PF04632 Fusaric acid resistance protein family NG828_08550 PF01047 MarR family NG828_08570 PF08212 Lipocalin-like domain NG828_08580 PF02601 Exonuclease VII, large subunit NG828_08580 PF13742 OB-fold nucleic acid binding domain NG828_08585 PF08331 Domain of unknown function (DUF1730) NG828_08590 PF01256 Carbohydrate kinase NG828_08590 PF03853 YjeF-related protein N-terminus NG828_08595 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE NG828_08600 PF01520 N-acetylmuramoyl-L-alanine amidase NG828_08600 PF11741 AMIN domain NG828_08605 PF01119 DNA mismatch repair protein, C-terminal domain NG828_08605 PF08676 MutL C terminal dimerisation domain NG828_08620 PF07879 PHB/PHA accumulation regulator DNA-binding domain NG828_08620 PF05233 PHB accumulation regulatory domain NG828_08625 PF00106 short chain dehydrogenase NG828_08630 PF00749 tRNA synthetases class I (E and Q), catalytic domain NG828_08635 PF01435 Peptidase family M48 NG828_08640 PF00072 Response regulator receiver domain NG828_08640 PF00990 Diguanylate cyclase, GGDEF domain NG828_08640 PF00563 EAL domain NG828_08650 PF07152 YaeQ protein NG828_08655 PF00313 'Cold-shock' DNA-binding domain NG828_08660 PF00043 Glutathione S-transferase, C-terminal domain NG828_08660 PF02798 Glutathione S-transferase, N-terminal domain NG828_08670 PF02696 Uncharacterized ACR, YdiU/UPF0061 family NG828_08675 PF00440 Bacterial regulatory proteins, tetR family NG828_08675 PF13977 BetI-type transcriptional repressor, C-terminal NG828_08680 PF00529 HlyD membrane-fusion protein of T1SS NG828_08680 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NG828_08685 PF00873 AcrB/AcrD/AcrF family NG828_08690 PF00156 Phosphoribosyl transferase domain NG828_08700 PF03880 DbpA RNA binding domain NG828_08700 PF00271 Helicase conserved C-terminal domain NG828_08700 PF00270 DEAD/DEAH box helicase NG828_08705 PF00005 ABC transporter NG828_08705 PF12848 ABC transporter NG828_08705 PF16326 ABC transporter C-terminal domain NG828_08715 PF00545 ribonuclease NG828_08720 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NG828_08720 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NG828_08730 PF01915 Glycosyl hydrolase family 3 C-terminal domain NG828_08730 PF00933 Glycosyl hydrolase family 3 N terminal domain NG828_08730 PF14310 Fibronectin type III-like domain NG828_08740 PF00854 POT family NG828_08775 PF08281 Sigma-70, region 4 NG828_08775 PF04542 Sigma-70 region 2 NG828_08780 PF00082 Subtilase family NG828_08790 PF01432 Peptidase family M3 NG828_08795 PF00255 Glutathione peroxidase NG828_08800 PF00175 Oxidoreductase NAD-binding domain NG828_08800 PF00970 Oxidoreductase FAD-binding domain NG828_08810 PF00005 ABC transporter NG828_08825 PF02627 Carboxymuconolactone decarboxylase family NG828_08830 PF04542 Sigma-70 region 2 NG828_08830 PF12680 SnoaL-like domain NG828_08830 PF08281 Sigma-70, region 4 NG828_08835 PF05683 Fumarase C-terminus NG828_08835 PF05681 Fumarate hydratase (Fumerase) NG828_08840 PF02798 Glutathione S-transferase, N-terminal domain NG828_08840 PF14497 Glutathione S-transferase, C-terminal domain NG828_08860 PF02253 Phospholipase A1 NG828_08870 PF00313 'Cold-shock' DNA-binding domain NG828_08885 PF00899 ThiF family NG828_08890 PF01590 GAF domain NG828_08890 PF00563 EAL domain NG828_08890 PF00990 Diguanylate cyclase, GGDEF domain NG828_08890 PF00360 Phytochrome region NG828_08895 PF01026 TatD related DNase NG828_08910 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NG828_08910 PF02770 Acyl-CoA dehydrogenase, middle domain NG828_08910 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NG828_08920 PF13417 Glutathione S-transferase, N-terminal domain NG828_08925 PF03358 NADPH-dependent FMN reductase NG828_08930 PF03796 DnaB-like helicase C terminal domain NG828_08930 PF00772 DnaB-like helicase N terminal domain NG828_08940 PF03441 FAD binding domain of DNA photolyase NG828_08940 PF00875 DNA photolyase NG828_08945 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain NG828_08945 PF06974 Protein of unknown function (DUF1298) NG828_08950 PF05736 OprF membrane domain NG828_08950 PF00691 OmpA family NG828_08955 PF03466 LysR substrate binding domain NG828_08955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NG828_08970 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NG828_08975 PF00873 AcrB/AcrD/AcrF family NG828_08985 PF02321 Outer membrane efflux protein NG828_08990 PF00990 Diguanylate cyclase, GGDEF domain NG828_08990 PF05230 MASE2 domain NG828_09010 PF00082 Subtilase family NG828_09015 PF01668 SmpB protein NG828_09025 PF03658 RnfH family Ubiquitin NG828_09030 PF04355 SmpA / OmlA family NG828_09035 PF01475 Ferric uptake regulator family NG828_09040 PF02463 RecF/RecN/SMC N terminal domain NG828_09045 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding NG828_09045 PF01628 HrcA protein C terminal domain NG828_09050 PF01025 GrpE NG828_09055 PF00012 Hsp70 protein NG828_09060 PF00226 DnaJ domain NG828_09060 PF01556 DnaJ C terminal domain NG828_09060 PF00684 DnaJ central domain NG828_09065 PF08543 Phosphomethylpyrimidine kinase NG828_09080 PF00005 ABC transporter NG828_09080 PF00664 ABC transporter transmembrane region NG828_09085 PF01205 Uncharacterized protein family UPF0029 NG828_09095 PF04542 Sigma-70 region 2 NG828_09095 PF08281 Sigma-70, region 4 NG828_09100 PF03707 Bacterial signalling protein N terminal repeat NG828_09100 PF00990 Diguanylate cyclase, GGDEF domain NG828_09100 PF00563 EAL domain NG828_09105 PF03641 Possible lysine decarboxylase NG828_09110 PF07992 Pyridine nucleotide-disulphide oxidoreductase NG828_09110 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NG828_09115 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NG828_09115 PF00364 Biotin-requiring enzyme NG828_09115 PF02817 e3 binding domain NG828_09120 PF02779 Transketolase, pyrimidine binding domain NG828_09120 PF00676 Dehydrogenase E1 component NG828_09120 PF16078 2-oxoglutarate dehydrogenase N-terminus NG828_09120 PF16870 2-oxoglutarate dehydrogenase C-terminal NG828_09130 PF08007 Cupin superfamily protein NG828_09140 PF08328 Adenylosuccinate lyase C-terminal NG828_09140 PF00206 Lyase NG828_09145 PF00571 CBS domain NG828_09145 PF03471 Transporter associated domain NG828_09145 PF01595 Cyclin M transmembrane N-terminal domain NG828_09155 PF00206 Lyase NG828_09155 PF10415 Fumarase C C-terminus NG828_09165 PF00155 Aminotransferase class I and II NG828_09170 PF00892 EamA-like transporter family NG828_09190 PF00005 ABC transporter NG828_09195 PF00392 Bacterial regulatory proteins, gntR family NG828_09205 PF00255 Glutathione peroxidase NG828_09210 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NG828_09210 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NG828_09215 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NG828_09215 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NG828_09215 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NG828_09220 PF04102 SlyX NG828_09230 PF01757 Acyltransferase family NG828_09240 PF16363 GDP-mannose 4,6 dehydratase NG828_09245 PF02965 Vitamin B12 dependent methionine synthase, activation domain NG828_09245 PF02607 B12 binding domain NG828_09245 PF02310 B12 binding domain NG828_09245 PF00809 Pterin binding enzyme NG828_09245 PF02574 Homocysteine S-methyltransferase NG828_09250 PF02607 B12 binding domain NG828_09250 PF00809 Pterin binding enzyme NG828_09250 PF02574 Homocysteine S-methyltransferase NG828_09250 PF02310 B12 binding domain NG828_09250 PF02965 Vitamin B12 dependent methionine synthase, activation domain NG828_09255 PF01209 ubiE/COQ5 methyltransferase family NG828_09260 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NG828_09260 PF02770 Acyl-CoA dehydrogenase, middle domain NG828_09260 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NG828_09265 PF00873 AcrB/AcrD/AcrF family NG828_09270 PF00529 HlyD membrane-fusion protein of T1SS NG828_09270 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NG828_09280 PF05088 Bacterial NAD-glutamate dehydrogenase NG828_09290 PF01513 ATP-NAD kinase NG828_09315 PF08411 Exonuclease C-terminal NG828_09315 PF00929 Exonuclease NG828_09320 PF01494 FAD binding domain NG828_09325 PF00266 Aminotransferase class-V NG828_09335 PF06052 3-hydroxyanthranilic acid dioxygenase NG828_09340 PF00484 Carbonic anhydrase NG828_09385 PF00196 Bacterial regulatory proteins, luxR family NG828_09385 PF00072 Response regulator receiver domain NG828_09405 PF01336 OB-fold nucleic acid binding domain NG828_09405 PF00152 tRNA synthetases class II (D, K and N) NG828_09410 PF01521 Iron-sulphur cluster biosynthesis NG828_09415 PF01250 Ribosomal protein S6 NG828_09420 PF01084 Ribosomal protein S18 NG828_09425 PF01281 Ribosomal protein L9, N-terminal domain NG828_09425 PF03948 Ribosomal protein L9, C-terminal domain NG828_09430 PF02463 RecF/RecN/SMC N terminal domain NG828_09435 PF04354 ZipA, C-terminal FtsZ-binding domain NG828_09440 PF00155 Aminotransferase class I and II NG828_09445 PF03119 NAD-dependent DNA ligase C4 zinc finger domain NG828_09445 PF03120 NAD-dependent DNA ligase OB-fold domain NG828_09445 PF12826 Helix-hairpin-helix motif NG828_09445 PF01653 NAD-dependent DNA ligase adenylation domain NG828_09445 PF00533 BRCA1 C Terminus (BRCT) domain NG828_09455 PF00152 tRNA synthetases class II (D, K and N) NG828_09465 PF01008 Initiation factor 2 subunit family NG828_09470 PF03989 DNA gyrase C-terminal domain, beta-propeller NG828_09470 PF00521 DNA gyrase/topoisomerase IV, subunit A NG828_09475 PF13360 PQQ-like domain NG828_09510 PF01175 Urocanase Rossmann-like domain NG828_09510 PF17392 Urocanase C-terminal domain NG828_09510 PF17391 Urocanase N-terminal domain NG828_09520 PF00221 Aromatic amino acid lyase NG828_09525 PF01979 Amidohydrolase family NG828_09540 PF00106 short chain dehydrogenase NG828_09575 PF01794 Ferric reductase like transmembrane component NG828_09580 PF00174 Oxidoreductase molybdopterin binding domain NG828_09585 PF00266 Aminotransferase class-V NG828_09590 PF01842 ACT domain NG828_09590 PF01817 Chorismate mutase type II NG828_09590 PF00800 Prephenate dehydratase NG828_09595 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NG828_09605 PF03544 Gram-negative bacterial TonB protein C-terminal NG828_09610 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NG828_09610 PF02403 Seryl-tRNA synthetase N-terminal domain NG828_09615 PF03466 LysR substrate binding domain NG828_09615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NG828_09675 PF00561 alpha/beta hydrolase fold NG828_09685 PF00072 Response regulator receiver domain NG828_09685 PF00196 Bacterial regulatory proteins, luxR family NG828_09695 PF00575 S1 RNA binding domain NG828_09695 PF10150 Ribonuclease E/G family NG828_09695 PF12111 Polyribonucleotide phosphorylase C terminal NG828_09700 PF00849 RNA pseudouridylate synthase NG828_09700 PF01479 S4 domain NG828_09705 PF11737 Protein of unknown function (DUF3300) NG828_09710 PF02535 ZIP Zinc transporter NG828_09720 PF01329 Pterin 4 alpha carbinolamine dehydratase NG828_09725 PF01106 NifU-like domain NG828_09735 PF00034 Cytochrome c NG828_09745 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NG828_09745 PF00529 HlyD membrane-fusion protein of T1SS NG828_09750 PF00873 AcrB/AcrD/AcrF family NG828_09755 PF00873 AcrB/AcrD/AcrF family NG828_09765 PF00795 Carbon-nitrogen hydrolase NG828_09770 PF04371 Porphyromonas-type peptidyl-arginine deiminase NG828_09780 PF00444 Ribosomal protein L36 NG828_09785 PF02224 Cytidylate kinase NG828_09790 PF00575 S1 RNA binding domain NG828_09795 PF00216 Bacterial DNA-binding protein NG828_09805 PF18073 Rubredoxin metal binding domain NG828_09810 PF00953 Glycosyl transferase family 4 NG828_09815 PF02719 Polysaccharide biosynthesis protein NG828_09820 PF00483 Nucleotidyl transferase NG828_09825 PF02803 Thiolase, C-terminal domain NG828_09825 PF00108 Thiolase, N-terminal domain NG828_09830 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NG828_09830 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NG828_09830 PF00378 Enoyl-CoA hydratase/isomerase NG828_09840 PF00334 Nucleoside diphosphate kinase NG828_09845 PF04055 Radical SAM superfamily NG828_09855 PF13464 Domain of unknown function (DUF4115) NG828_09860 PF09976 Tetratricopeptide repeat-like domain NG828_09865 PF01011 PQQ enzyme repeat NG828_09865 PF13360 PQQ-like domain NG828_09870 PF01926 50S ribosome-binding GTPase NG828_09870 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NG828_09875 PF12804 MobA-like NTP transferase domain NG828_09880 PF00994 Probable molybdopterin binding domain NG828_09880 PF03454 MoeA C-terminal region (domain IV) NG828_09880 PF03453 MoeA N-terminal region (domain I and II) NG828_09885 PF00899 ThiF family NG828_09890 PF00999 Sodium/hydrogen exchanger family NG828_09890 PF02254 TrkA-N domain NG828_09895 PF12146 Serine aminopeptidase, S33 NG828_09905 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NG828_09905 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NG828_09910 PF00571 CBS domain NG828_09910 PF00478 IMP dehydrogenase / GMP reductase domain NG828_09915 PF00117 Glutamine amidotransferase class-I NG828_09915 PF00958 GMP synthase C terminal domain NG828_09915 PF02540 NAD synthase NG828_09925 PF13356 Arm DNA-binding domain NG828_09925 PF00589 Phage integrase family NG828_09955 PF13476 AAA domain NG828_09965 PF04002 RadC-like JAB domain NG828_09990 PF06067 Domain of unknown function (DUF932) NG828_09995 PF02195 ParB-like nuclease domain NG828_10005 PF05284 Protein of unknown function (DUF736) NG828_10020 PF13614 AAA domain NG828_10030 PF10502 Signal peptidase, peptidase S26 NG828_10045 PF03466 LysR substrate binding domain NG828_10045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NG828_10075 PF04717 Type VI secretion system, phage-baseplate injector NG828_10075 PF06715 Gp5 C-terminal repeat (3 copies) NG828_10080 PF03466 LysR substrate binding domain NG828_10080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NG828_10085 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NG828_10085 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NG828_10090 PF03401 Tripartite tricarboxylate transporter family receptor NG828_10110 PF02534 Type IV secretory system Conjugative DNA transfer NG828_10120 PF00437 Type II/IV secretion system protein NG828_10125 PF04956 TrbC/VIRB2 family NG828_10135 PF03135 CagE, TrbE, VirB family, component of type IV transporter system NG828_10150 PF04610 TrbL/VirB6 plasmid conjugal transfer protein NG828_10165 PF03743 Bacterial conjugation TrbI-like protein NG828_10225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NG828_10225 PF03466 LysR substrate binding domain NG828_10240 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) NG828_10245 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus NG828_10245 PF00361 Proton-conducting membrane transporter NG828_10245 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NG828_10250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NG828_10250 PF03466 LysR substrate binding domain NG828_10260 PF01494 FAD binding domain NG828_10270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG828_10270 PF00512 His Kinase A (phospho-acceptor) domain NG828_10270 PF00989 PAS fold NG828_10270 PF16736 Single Cache-like NG828_10310 PF01566 Natural resistance-associated macrophage protein NG828_10315 PF02742 Iron dependent repressor, metal binding and dimerisation domain NG828_10315 PF01325 Iron dependent repressor, N-terminal DNA binding domain NG828_10320 PF14437 MafB19-like deaminase NG828_10325 PF00929 Exonuclease NG828_10330 PF00924 Mechanosensitive ion channel NG828_10330 PF05552 Conserved TM helix NG828_10335 PF00391 PEP-utilising enzyme, mobile domain NG828_10335 PF02896 PEP-utilising enzyme, TIM barrel domain NG828_10335 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NG828_10340 PF03618 Kinase/pyrophosphorylase NG828_10370 PF01066 CDP-alcohol phosphatidyltransferase NG828_10380 PF00561 alpha/beta hydrolase fold NG828_10385 PF17263 Family of unknown function (DUF5329) NG828_10390 PF04024 PspC domain NG828_10400 PF01266 FAD dependent oxidoreductase NG828_10400 PF05430 S-adenosyl-L-methionine-dependent methyltransferase NG828_10410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG828_10410 PF00072 Response regulator receiver domain NG828_10410 PF13426 PAS domain NG828_10415 PF16921 Tex protein YqgF-like domain NG828_10415 PF09371 Tex-like protein N-terminal domain NG828_10415 PF00575 S1 RNA binding domain NG828_10415 PF17674 HHH domain NG828_10420 PF00072 Response regulator receiver domain NG828_10420 PF00672 HAMP domain NG828_10420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG828_10420 PF00512 His Kinase A (phospho-acceptor) domain NG828_10420 PF01627 Hpt domain NG828_10420 PF17149 Periplasmic sensor domain found in signal transduction proteins NG828_10450 PF00873 AcrB/AcrD/AcrF family NG828_10465 PF03551 Transcriptional regulator PadR-like family NG828_10475 PF00501 AMP-binding enzyme NG828_10475 PF13193 AMP-binding enzyme C-terminal domain NG828_10475 PF00668 Condensation domain NG828_10475 PF00550 Phosphopantetheine attachment site NG828_10480 PF00550 Phosphopantetheine attachment site NG828_10480 PF13193 AMP-binding enzyme C-terminal domain NG828_10480 PF00501 AMP-binding enzyme NG828_10480 PF00668 Condensation domain NG828_10485 PF00550 Phosphopantetheine attachment site NG828_10485 PF13193 AMP-binding enzyme C-terminal domain NG828_10485 PF00501 AMP-binding enzyme NG828_10485 PF00668 Condensation domain NG828_10490 PF00550 Phosphopantetheine attachment site NG828_10490 PF00668 Condensation domain NG828_10490 PF13193 AMP-binding enzyme C-terminal domain NG828_10490 PF00501 AMP-binding enzyme NG828_10495 PF13193 AMP-binding enzyme C-terminal domain NG828_10495 PF00668 Condensation domain NG828_10495 PF00550 Phosphopantetheine attachment site NG828_10495 PF00501 AMP-binding enzyme NG828_10505 PF00668 Condensation domain NG828_10505 PF00550 Phosphopantetheine attachment site NG828_10505 PF13193 AMP-binding enzyme C-terminal domain NG828_10505 PF00501 AMP-binding enzyme NG828_10510 PF00501 AMP-binding enzyme NG828_10510 PF13193 AMP-binding enzyme C-terminal domain NG828_10510 PF00550 Phosphopantetheine attachment site NG828_10510 PF00668 Condensation domain NG828_10515 PF02801 Beta-ketoacyl synthase, C-terminal domain NG828_10515 PF08659 KR domain NG828_10515 PF00668 Condensation domain NG828_10515 PF00550 Phosphopantetheine attachment site NG828_10515 PF14765 Polyketide synthase dehydratase NG828_10515 PF13193 AMP-binding enzyme C-terminal domain NG828_10515 PF00501 AMP-binding enzyme NG828_10515 PF00109 Beta-ketoacyl synthase, N-terminal domain NG828_10515 PF16197 Ketoacyl-synthetase C-terminal extension NG828_10525 PF13193 AMP-binding enzyme C-terminal domain NG828_10525 PF00501 AMP-binding enzyme NG828_10525 PF00668 Condensation domain NG828_10525 PF00550 Phosphopantetheine attachment site NG828_10525 PF00550 Phosphopantetheine attachment site NG828_10525 PF00668 Condensation domain NG828_10525 PF13193 AMP-binding enzyme C-terminal domain NG828_10525 PF00501 AMP-binding enzyme NG828_10535 PF00005 ABC transporter NG828_10535 PF00664 ABC transporter transmembrane region NG828_10560 PF00873 AcrB/AcrD/AcrF family NG828_10575 PF02321 Outer membrane efflux protein NG828_10580 PF00486 Transcriptional regulatory protein, C terminal NG828_10580 PF00072 Response regulator receiver domain NG828_10585 PF00512 His Kinase A (phospho-acceptor) domain NG828_10585 PF00672 HAMP domain NG828_10585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG828_10605 PF07728 AAA domain (dynein-related subfamily) NG828_10615 PF05762 VWA domain containing CoxE-like protein NG828_10750 PF00580 UvrD/REP helicase N-terminal domain NG828_10750 PF13361 UvrD-like helicase C-terminal domain NG828_10760 PF01494 FAD binding domain NG828_10765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NG828_10765 PF03466 LysR substrate binding domain NG828_10795 PF00005 ABC transporter NG828_10820 PF00664 ABC transporter transmembrane region NG828_10820 PF00005 ABC transporter NG828_10840 PF00534 Glycosyl transferases group 1 NG828_10840 PF13579 Glycosyl transferase 4-like domain NG828_10845 PF13439 Glycosyltransferase Family 4 NG828_10845 PF00534 Glycosyl transferases group 1 NG828_10855 PF08241 Methyltransferase domain NG828_10860 PF13382 Adenine deaminase C-terminal domain NG828_10860 PF01979 Amidohydrolase family NG828_10865 PF08241 Methyltransferase domain NG828_10880 PF00535 Glycosyl transferase family 2 NG828_10885 PF01943 Polysaccharide biosynthesis protein NG828_10890 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NG828_10910 PF05523 WxcM-like, C-terminal NG828_10925 PF00034 Cytochrome c NG828_10935 PF04542 Sigma-70 region 2 NG828_10935 PF08281 Sigma-70, region 4 NG828_10945 PF00082 Subtilase family NG828_10950 PF01578 Cytochrome C assembly protein NG828_10960 PF03100 CcmE NG828_10965 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal NG828_10965 PF01578 Cytochrome C assembly protein NG828_10970 PF08534 Redoxin NG828_10975 PF03918 Cytochrome C biogenesis protein NG828_10985 PF00072 Response regulator receiver domain NG828_11010 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NG828_11020 PF00654 Voltage gated chloride channel NG828_11025 PF00004 ATPase family associated with various cellular activities (AAA) NG828_11025 PF12002 MgsA AAA+ ATPase C terminal NG828_11025 PF16193 AAA C-terminal domain NG828_11035 PF01545 Cation efflux family NG828_11040 PF03548 Outer membrane lipoprotein carrier protein LolA NG828_11050 PF17854 FtsK alpha domain NG828_11050 PF01580 FtsK/SpoIIIE family NG828_11050 PF13491 4TM region of DNA translocase FtsK/SpoIIIE NG828_11050 PF09397 Ftsk gamma domain NG828_11055 PF07992 Pyridine nucleotide-disulphide oxidoreductase NG828_11065 PF03588 Leucyl/phenylalanyl-tRNA protein transferase NG828_11070 PF01176 Translation initiation factor 1A / IF-1 NG828_11075 PF07724 AAA domain (Cdc48 subfamily) NG828_11075 PF17871 AAA lid domain NG828_11075 PF02861 Clp amino terminal domain, pathogenicity island component NG828_11075 PF10431 C-terminal, D2-small domain, of ClpB protein NG828_11075 PF00004 ATPase family associated with various cellular activities (AAA) NG828_11080 PF02617 ATP-dependent Clp protease adaptor protein ClpS NG828_11090 PF00293 NUDIX domain NG828_11100 PF04356 Protein of unknown function (DUF489) NG828_11105 PF12729 Four helix bundle sensory module for signal transduction NG828_11105 PF00672 HAMP domain NG828_11105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG828_11115 PF00005 ABC transporter NG828_11125 PF03707 Bacterial signalling protein N terminal repeat NG828_11125 PF00990 Diguanylate cyclase, GGDEF domain NG828_11125 PF00563 EAL domain NG828_11130 PF07730 Histidine kinase NG828_11130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG828_11135 PF00563 EAL domain NG828_11135 PF00990 Diguanylate cyclase, GGDEF domain NG828_11135 PF03707 Bacterial signalling protein N terminal repeat NG828_11140 PF00512 His Kinase A (phospho-acceptor) domain NG828_11140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG828_11160 PF01584 CheW-like domain NG828_11160 PF00072 Response regulator receiver domain NG828_11170 PF00460 Flagella basal body rod protein NG828_11170 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NG828_11180 PF07559 Flagellar basal body protein FlaE NG828_11180 PF00460 Flagella basal body rod protein NG828_11180 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NG828_11185 PF00460 Flagella basal body rod protein NG828_11185 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NG828_11190 PF00460 Flagella basal body rod protein NG828_11190 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NG828_11195 PF02107 Flagellar L-ring protein NG828_11200 PF02119 Flagellar P-ring protein NG828_11205 PF10135 Rod binding protein NG828_11205 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase NG828_11210 PF07196 Flagellin hook IN motif NG828_11210 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NG828_11225 PF00700 Bacterial flagellin C-terminal helical region NG828_11225 PF07196 Flagellin hook IN motif NG828_11225 PF00669 Bacterial flagellin N-terminal helical region NG828_11230 PF00700 Bacterial flagellin C-terminal helical region NG828_11230 PF00669 Bacterial flagellin N-terminal helical region NG828_11240 PF02561 Flagellar protein FliS NG828_11255 PF00196 Bacterial regulatory proteins, luxR family NG828_11255 PF00072 Response regulator receiver domain NG828_11260 PF00309 Sigma-54 factor, Activator interacting domain (AID) NG828_11260 PF04963 Sigma-54 factor, core binding domain NG828_11260 PF04552 Sigma-54, DNA binding domain NG828_11265 PF01339 CheB methylesterase NG828_11265 PF00072 Response regulator receiver domain NG828_11270 PF06490 Flagellar regulatory protein FleQ NG828_11270 PF02954 Bacterial regulatory protein, Fis family NG828_11270 PF00158 Sigma-54 interaction domain NG828_11275 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NG828_11285 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NG828_11285 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NG828_11330 PF00534 Glycosyl transferases group 1 NG828_11330 PF00535 Glycosyl transferase family 2 NG828_11335 PF02049 Flagellar hook-basal body complex protein FliE NG828_11340 PF01514 Secretory protein of YscJ/FliF family NG828_11340 PF08345 Flagellar M-ring protein C-terminal NG828_11345 PF14842 FliG N-terminal domain NG828_11345 PF14841 FliG middle domain NG828_11345 PF01706 FliG C-terminal domain NG828_11355 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NG828_11355 PF18269 T3SS EscN ATPase C-terminal domain NG828_11375 PF02154 Flagellar motor switch protein FliM NG828_11375 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NG828_11380 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NG828_11385 PF04347 Flagellar biosynthesis protein, FliO NG828_11390 PF00813 FliP family NG828_11395 PF01313 Bacterial export proteins, family 3 NG828_11400 PF01311 Bacterial export proteins, family 1 NG828_11405 PF00990 Diguanylate cyclase, GGDEF domain NG828_11410 PF01312 FlhB HrpN YscU SpaS Family NG828_11415 PF00771 FHIPEP family NG828_11420 PF00448 SRP54-type protein, GTPase domain NG828_11425 PF10609 NUBPL iron-transfer P-loop NTPase NG828_11430 PF04542 Sigma-70 region 2 NG828_11430 PF04539 Sigma-70 region 3 NG828_11430 PF04545 Sigma-70, region 4 NG828_11435 PF00072 Response regulator receiver domain NG828_11440 PF04344 Chemotaxis phosphatase, CheZ NG828_11445 PF02895 Signal transducing histidine kinase, homodimeric domain NG828_11445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG828_11445 PF01627 Hpt domain NG828_11445 PF00072 Response regulator receiver domain NG828_11445 PF01584 CheW-like domain NG828_11450 PF01618 MotA/TolQ/ExbB proton channel family NG828_11455 PF13677 Membrane MotB of proton-channel complex MotA/MotB NG828_11455 PF00691 OmpA family NG828_11460 PF13614 AAA domain NG828_11465 PF01584 CheW-like domain NG828_11475 PF00072 Response regulator receiver domain NG828_11480 PF01584 CheW-like domain NG828_11480 PF09078 CheY binding NG828_11480 PF02895 Signal transducing histidine kinase, homodimeric domain NG828_11480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG828_11480 PF01627 Hpt domain NG828_11485 PF00672 HAMP domain NG828_11485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG828_11485 PF02203 Tar ligand binding domain homologue NG828_11490 PF00672 HAMP domain NG828_11490 PF02203 Tar ligand binding domain homologue NG828_11490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG828_11495 PF00672 HAMP domain NG828_11495 PF02203 Tar ligand binding domain homologue NG828_11495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG828_11500 PF00672 HAMP domain NG828_11500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG828_11500 PF02203 Tar ligand binding domain homologue NG828_11505 PF00672 HAMP domain NG828_11505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG828_11505 PF02203 Tar ligand binding domain homologue NG828_11515 PF00672 HAMP domain NG828_11515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG828_11515 PF02203 Tar ligand binding domain homologue NG828_11520 PF00672 HAMP domain NG828_11520 PF02203 Tar ligand binding domain homologue NG828_11520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG828_11525 PF02203 Tar ligand binding domain homologue NG828_11525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG828_11525 PF00672 HAMP domain NG828_11530 PF00672 HAMP domain NG828_11530 PF02203 Tar ligand binding domain homologue NG828_11530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG828_11540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG828_11540 PF02203 Tar ligand binding domain homologue NG828_11540 PF00672 HAMP domain NG828_11545 PF07317 Flagellar regulator YcgR NG828_11545 PF07238 PilZ domain NG828_11550 PF01584 CheW-like domain NG828_11560 PF02203 Tar ligand binding domain homologue NG828_11560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG828_11560 PF00672 HAMP domain NG828_11565 PF00672 HAMP domain NG828_11565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG828_11565 PF17200 Single Cache domain 2 NG828_11570 PF02203 Tar ligand binding domain homologue NG828_11570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG828_11570 PF00672 HAMP domain NG828_11575 PF01739 CheR methyltransferase, SAM binding domain NG828_11575 PF03705 CheR methyltransferase, all-alpha domain NG828_11580 PF03975 CheD chemotactic sensory transduction NG828_11585 PF01339 CheB methylesterase NG828_11585 PF00072 Response regulator receiver domain NG828_11590 PF03707 Bacterial signalling protein N terminal repeat NG828_11590 PF00990 Diguanylate cyclase, GGDEF domain NG828_11590 PF00563 EAL domain NG828_11595 PF06434 Aconitate hydratase 2 N-terminus NG828_11595 PF11791 Aconitate B N-terminal domain NG828_11595 PF00330 Aconitase family (aconitate hydratase) NG828_11610 PF00330 Aconitase family (aconitate hydratase) NG828_11610 PF00694 Aconitase C-terminal domain NG828_11615 PF02028 BCCT, betaine/carnitine/choline family transporter NG828_11620 PF13977 BetI-type transcriptional repressor, C-terminal NG828_11620 PF00440 Bacterial regulatory proteins, tetR family NG828_11625 PF00171 Aldehyde dehydrogenase family NG828_11630 PF05199 GMC oxidoreductase NG828_11630 PF00732 GMC oxidoreductase NG828_11635 PF00501 AMP-binding enzyme NG828_11635 PF13193 AMP-binding enzyme C-terminal domain NG828_11640 PF00378 Enoyl-CoA hydratase/isomerase NG828_11645 PF00072 Response regulator receiver domain NG828_11645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG828_11645 PF00512 His Kinase A (phospho-acceptor) domain NG828_11645 PF01627 Hpt domain NG828_11655 PF01336 OB-fold nucleic acid binding domain NG828_11655 PF00152 tRNA synthetases class II (D, K and N) NG828_11665 PF04397 LytTr DNA-binding domain NG828_11665 PF00072 Response regulator receiver domain NG828_11670 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) NG828_11675 PF01368 DHH family NG828_11675 PF02272 DHHA1 domain NG828_11675 PF17768 RecJ OB domain NG828_11685 PF01272 Transcription elongation factor, GreA/GreB, C-term NG828_11685 PF03449 Transcription elongation factor, N-terminal NG828_11690 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NG828_11690 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NG828_11690 PF02142 MGS-like domain NG828_11700 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain NG828_11700 PF00117 Glutamine amidotransferase class-I NG828_11705 PF05173 Dihydrodipicolinate reductase, C-terminus NG828_11705 PF01113 Dihydrodipicolinate reductase, N-terminus NG828_11710 PF03473 MOSC domain NG828_11710 PF03475 3-alpha domain NG828_11715 PF00155 Aminotransferase class I and II NG828_11725 PF07670 Nucleoside recognition NG828_11725 PF02421 Ferrous iron transport protein B NG828_11725 PF07664 Ferrous iron transport protein B C terminus NG828_11735 PF00378 Enoyl-CoA hydratase/isomerase NG828_11745 PF00682 HMGL-like NG828_11750 PF00106 short chain dehydrogenase NG828_11755 PF08207 Elongation factor P (EF-P) KOW-like domain NG828_11755 PF09285 Elongation factor P, C-terminal NG828_11755 PF01132 Elongation factor P (EF-P) OB domain NG828_11775 PF01565 FAD binding domain NG828_11775 PF02913 FAD linked oxidases, C-terminal domain NG828_11780 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NG828_11780 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NG828_11790 PF13520 Amino acid permease NG828_11795 PF13520 Amino acid permease NG828_11800 PF00596 Class II Aldolase and Adducin N-terminal domain NG828_11805 PF03079 ARD/ARD' family NG828_11825 PF01502 Phosphoribosyl-AMP cyclohydrolase NG828_11825 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase NG828_11830 PF00977 Histidine biosynthesis protein NG828_11835 PF00977 Histidine biosynthesis protein NG828_11840 PF00117 Glutamine amidotransferase class-I NG828_11845 PF00475 Imidazoleglycerol-phosphate dehydratase NG828_11850 PF00155 Aminotransferase class I and II NG828_11855 PF00815 Histidinol dehydrogenase NG828_11875 PF03129 Anticodon binding domain NG828_11875 PF13393 Histidyl-tRNA synthetase NG828_11880 PF00027 Cyclic nucleotide-binding domain NG828_11880 PF13545 Crp-like helix-turn-helix domain NG828_11890 PF00291 Pyridoxal-phosphate dependent enzyme NG828_11890 PF14821 Threonine synthase N terminus NG828_11900 PF00288 GHMP kinases N terminal domain NG828_11900 PF08544 GHMP kinases C terminal NG828_11905 PF03447 Homoserine dehydrogenase, NAD binding domain NG828_11905 PF00742 Homoserine dehydrogenase NG828_11905 PF01842 ACT domain NG828_11905 PF13840 ACT domain NG828_11905 PF00696 Amino acid kinase family NG828_11920 PF00171 Aldehyde dehydrogenase family NG828_11935 PF01180 Dihydroorotate dehydrogenase NG828_11940 PF01565 FAD binding domain NG828_11940 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain NG828_11950 PF01177 Asp/Glu/Hydantoin racemase NG828_11960 PF01569 PAP2 superfamily NG828_11965 PF04551 GcpE protein NG828_11970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG828_11970 PF00512 His Kinase A (phospho-acceptor) domain NG828_11975 PF00072 Response regulator receiver domain NG828_11980 PF03707 Bacterial signalling protein N terminal repeat NG828_11980 PF00990 Diguanylate cyclase, GGDEF domain NG828_11980 PF00563 EAL domain NG828_11985 PF00474 Sodium:solute symporter family NG828_11990 PF01915 Glycosyl hydrolase family 3 C-terminal domain NG828_11990 PF00933 Glycosyl hydrolase family 3 N terminal domain NG828_11990 PF14310 Fibronectin type III-like domain NG828_12010 PF18807 Tripartite Tc toxins repeat NG828_12010 PF05785 Rho-activating domain of cytotoxic necrotizing factor NG828_12020 PF18807 Tripartite Tc toxins repeat NG828_12020 PF05785 Rho-activating domain of cytotoxic necrotizing factor NG828_12030 PF03527 RHS protein NG828_12045 PF03527 RHS protein NG828_12045 PF05593 RHS Repeat NG828_12065 PF05593 RHS Repeat NG828_12065 PF03527 RHS protein NG828_12075 PF03150 Di-haem cytochrome c peroxidase NG828_12085 PF00342 Phosphoglucose isomerase NG828_12090 PF02261 Aspartate decarboxylase NG828_12095 PF02569 Pantoate-beta-alanine ligase NG828_12100 PF02548 Ketopantoate hydroxymethyltransferase NG828_12105 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NG828_12110 PF12626 Polymerase A arginine-rich C-terminus NG828_12110 PF12627 Probable RNA and SrmB- binding site of polymerase A NG828_12110 PF01743 Poly A polymerase head domain NG828_12120 PF02649 Type I GTP cyclohydrolase folE2 NG828_12125 PF00083 Sugar (and other) transporter NG828_12135 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NG828_12135 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NG828_12140 PF16338 Domain of unknown function (DUF4968) NG828_12140 PF17137 Domain of unknown function (DUF5110) NG828_12140 PF01055 Glycosyl hydrolases family 31 NG828_12160 PF03466 LysR substrate binding domain NG828_12160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NG828_12165 PF01081 KDPG and KHG aldolase NG828_12170 PF13378 Enolase C-terminal domain-like NG828_12170 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NG828_12175 PF08450 SMP-30/Gluconolactonase/LRE-like region NG828_12180 PF05035 2-keto-3-deoxy-galactonokinase NG828_12185 PF11953 Domain of unknown function (DUF3470) NG828_12185 PF00037 4Fe-4S binding domain NG828_12195 PF00701 Dihydrodipicolinate synthetase family NG828_12205 PF00578 AhpC/TSA family NG828_12210 PF13638 PIN domain NG828_12210 PF02562 PhoH-like protein NG828_12225 PF02581 Thiamine monophosphate synthase NG828_12225 PF08543 Phosphomethylpyrimidine kinase NG828_12245 PF00106 short chain dehydrogenase NG828_12255 PF03466 LysR substrate binding domain NG828_12255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NG828_12260 PF02678 Pirin NG828_12260 PF17954 Quercetinase C-terminal cupin domain NG828_12265 PF00128 Alpha amylase, catalytic domain NG828_12265 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NG828_12300 PF02599 Global regulator protein family NG828_12305 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NG828_12305 PF01411 tRNA synthetases class II (A) NG828_12305 PF02272 DHHA1 domain NG828_12310 PF02631 RecX family NG828_12315 PF00154 recA bacterial DNA recombination protein NG828_12320 PF00717 Peptidase S24-like NG828_12320 PF01726 LexA DNA binding domain NG828_12325 PF03109 ABC1 family NG828_12330 PF02464 Competence-damaged protein NG828_12335 PF13167 GTP-binding GTPase N-terminal NG828_12335 PF16360 GTP-binding GTPase Middle Region NG828_12335 PF01926 50S ribosome-binding GTPase NG828_12340 PF17209 Hfq protein NG828_12350 PF00809 Pterin binding enzyme NG828_12355 PF00004 ATPase family associated with various cellular activities (AAA) NG828_12355 PF17862 AAA+ lid domain NG828_12355 PF06480 FtsH Extracellular NG828_12355 PF01434 Peptidase family M41 NG828_12360 PF01728 FtsJ-like methyltransferase NG828_12365 PF01985 CRS1 / YhbY (CRM) domain NG828_12375 PF01476 LysM domain NG828_12375 PF01551 Peptidase family M23 NG828_12380 PF09335 SNARE associated Golgi protein NG828_12390 PF01975 Survival protein SurE NG828_12395 PF01713 Smr domain NG828_12405 PF04542 Sigma-70 region 2 NG828_12405 PF08281 Sigma-70, region 4 NG828_12415 PF07715 TonB-dependent Receptor Plug Domain NG828_12415 PF00593 TonB dependent receptor NG828_12420 PF01142 tRNA pseudouridine synthase D (TruD) NG828_12425 PF02542 YgbB family NG828_12430 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NG828_12435 PF04977 Septum formation initiator NG828_12440 PF00113 Enolase, C-terminal TIM barrel domain NG828_12440 PF03952 Enolase, N-terminal domain NG828_12450 PF00793 DAHP synthetase I family NG828_12460 PF06418 CTP synthase N-terminus NG828_12460 PF00117 Glutamine amidotransferase class-I NG828_12470 PF00204 DNA gyrase B NG828_12470 PF01751 Toprim domain NG828_12470 PF00986 DNA gyrase B subunit, carboxyl terminus NG828_12470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG828_12475 PF02611 CDP-diacylglycerol pyrophosphatase NG828_12485 PF01384 Phosphate transporter family NG828_12495 PF01595 Cyclin M transmembrane N-terminal domain NG828_12495 PF03471 Transporter associated domain NG828_12495 PF00571 CBS domain NG828_12510 PF00296 Luciferase-like monooxygenase NG828_12520 PF17773 UPF0176 acylphosphatase like domain NG828_12520 PF00581 Rhodanese-like domain NG828_12530 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NG828_12540 PF03707 Bacterial signalling protein N terminal repeat NG828_12540 PF00990 Diguanylate cyclase, GGDEF domain NG828_12540 PF00563 EAL domain NG828_12550 PF01645 Conserved region in glutamate synthase NG828_12555 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NG828_12555 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NG828_12555 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NG828_12570 PF00356 Bacterial regulatory proteins, lacI family NG828_12575 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NG828_12575 PF00381 PTS HPr component phosphorylation site NG828_12575 PF02896 PEP-utilising enzyme, TIM barrel domain NG828_12575 PF05524 PEP-utilising enzyme, N-terminal NG828_12575 PF00391 PEP-utilising enzyme, mobile domain NG828_12580 PF00294 pfkB family carbohydrate kinase NG828_12585 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NG828_12595 PF00072 Response regulator receiver domain NG828_12595 PF00486 Transcriptional regulatory protein, C terminal NG828_12600 PF00512 His Kinase A (phospho-acceptor) domain NG828_12600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG828_12615 PF00005 ABC transporter NG828_12615 PF02687 FtsX-like permease family NG828_12615 PF12704 MacB-like periplasmic core domain NG828_12665 PF00550 Phosphopantetheine attachment site NG828_12670 PF00109 Beta-ketoacyl synthase, N-terminal domain NG828_12670 PF02801 Beta-ketoacyl synthase, C-terminal domain NG828_12675 PF00202 Aminotransferase class-III NG828_12695 PF06969 HemN C-terminal domain NG828_12695 PF04055 Radical SAM superfamily NG828_12710 PF12801 4Fe-4S binding domain NG828_12710 PF13746 4Fe-4S dicluster domain NG828_12710 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase NG828_12755 PF00593 TonB dependent receptor NG828_12755 PF07715 TonB-dependent Receptor Plug Domain NG828_12770 PF01566 Natural resistance-associated macrophage protein NG828_12780 PF02954 Bacterial regulatory protein, Fis family NG828_12780 PF00072 Response regulator receiver domain NG828_12780 PF00158 Sigma-54 interaction domain NG828_12785 PF08003 Protein of unknown function (DUF1698) NG828_12815 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NG828_12815 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NG828_12820 PF08240 Alcohol dehydrogenase GroES-like domain NG828_12820 PF00107 Zinc-binding dehydrogenase NG828_12825 PF16363 GDP-mannose 4,6 dehydratase NG828_12830 PF01370 NAD dependent epimerase/dehydratase family NG828_12835 PF16363 GDP-mannose 4,6 dehydratase NG828_12845 PF01066 CDP-alcohol phosphatidyltransferase NG828_12850 PF08459 UvrC Helix-hairpin-helix N-terminal NG828_12850 PF01541 GIY-YIG catalytic domain NG828_12850 PF02151 UvrB/uvrC motif NG828_12860 PF01451 Low molecular weight phosphotyrosine protein phosphatase NG828_12865 PF02348 Cytidylyltransferase NG828_12870 PF00593 TonB dependent receptor NG828_12870 PF07715 TonB-dependent Receptor Plug Domain NG828_12870 PF07660 Secretin and TonB N terminus short domain NG828_12875 PF02606 Tetraacyldisaccharide-1-P 4'-kinase NG828_12880 PF00664 ABC transporter transmembrane region NG828_12880 PF00005 ABC transporter NG828_12885 PF02472 Biopolymer transport protein ExbD/TolR NG828_12890 PF01618 MotA/TolQ/ExbB proton channel family NG828_12895 PF03772 Competence protein NG828_12895 PF00753 Metallo-beta-lactamase superfamily NG828_12905 PF00005 ABC transporter NG828_12910 PF12704 MacB-like periplasmic core domain NG828_12910 PF02687 FtsX-like permease family NG828_12920 PF03937 Flavinator of succinate dehydrogenase NG828_12925 PF13237 4Fe-4S dicluster domain NG828_12925 PF13085 2Fe-2S iron-sulfur cluster binding domain NG828_12930 PF02910 Fumarate reductase flavoprotein C-term NG828_12930 PF00890 FAD binding domain NG828_12935 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NG828_12940 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NG828_12950 PF01571 Aminomethyltransferase folate-binding domain NG828_12955 PF08402 TOBE domain NG828_12955 PF00005 ABC transporter NG828_12960 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain NG828_12960 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain NG828_12965 PF02685 Glucokinase NG828_12970 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NG828_12975 PF00920 Dehydratase family NG828_12980 PF01081 KDPG and KHG aldolase NG828_12990 PF00528 Binding-protein-dependent transport system inner membrane component NG828_12995 PF00528 Binding-protein-dependent transport system inner membrane component NG828_13015 PF00356 Bacterial regulatory proteins, lacI family NG828_13025 PF03795 YCII-related domain NG828_13030 PF02616 Segregation and condensation protein ScpA NG828_13035 PF04079 Segregation and condensation complex subunit ScpB NG828_13040 PF00849 RNA pseudouridylate synthase NG828_13040 PF01479 S4 domain NG828_13055 PF02611 CDP-diacylglycerol pyrophosphatase NG828_13060 PF05658 Head domain of trimeric autotransporter adhesin NG828_13060 PF05662 Coiled stalk of trimeric autotransporter adhesin NG828_13060 PF03895 YadA-like membrane anchor domain NG828_13060 PF03895 YadA-like membrane anchor domain NG828_13060 PF05662 Coiled stalk of trimeric autotransporter adhesin NG828_13060 PF05658 Head domain of trimeric autotransporter adhesin NG828_13060 PF13018 Extended Signal Peptide of Type V secretion system NG828_13060 PF13018 Extended Signal Peptide of Type V secretion system NG828_13065 PF00072 Response regulator receiver domain NG828_13065 PF00196 Bacterial regulatory proteins, luxR family NG828_13070 PF00512 His Kinase A (phospho-acceptor) domain NG828_13070 PF09456 RcsC Alpha-Beta-Loop (ABL) NG828_13070 PF00072 Response regulator receiver domain NG828_13070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG828_13075 PF03707 Bacterial signalling protein N terminal repeat NG828_13075 PF00990 Diguanylate cyclase, GGDEF domain NG828_13075 PF00563 EAL domain NG828_13085 PF00795 Carbon-nitrogen hydrolase NG828_13090 PF00155 Aminotransferase class I and II NG828_13095 PF00005 ABC transporter NG828_13100 PF03379 CcmB protein NG828_13105 PF01578 Cytochrome C assembly protein NG828_13115 PF03100 CcmE NG828_13120 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal NG828_13120 PF01578 Cytochrome C assembly protein NG828_13125 PF08534 Redoxin NG828_13130 PF03918 Cytochrome C biogenesis protein NG828_13145 PF00561 alpha/beta hydrolase fold NG828_13150 PF00082 Subtilase family NG828_13150 PF01483 Proprotein convertase P-domain NG828_13155 PF00005 ABC transporter NG828_13155 PF00664 ABC transporter transmembrane region NG828_13160 PF00664 ABC transporter transmembrane region NG828_13160 PF00005 ABC transporter NG828_13165 PF01654 Cytochrome bd terminal oxidase subunit I NG828_13170 PF02322 Cytochrome bd terminal oxidase subunit II NG828_13190 PF02129 X-Pro dipeptidyl-peptidase (S15 family) NG828_13190 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain NG828_13195 PF00171 Aldehyde dehydrogenase family NG828_13200 PF01472 PUA domain NG828_13200 PF00696 Amino acid kinase family NG828_13210 PF00206 Lyase NG828_13215 PF01118 Semialdehyde dehydrogenase, NAD binding domain NG828_13225 PF00696 Amino acid kinase family NG828_13225 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase NG828_13230 PF07687 Peptidase dimerisation domain NG828_13230 PF01546 Peptidase family M20/M25/M40 NG828_13240 PF00764 Arginosuccinate synthase NG828_13245 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NG828_13245 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NG828_13255 PF01406 tRNA synthetases class I (C) catalytic domain NG828_13255 PF09190 DALR domain NG828_13260 PF02657 Fe-S metabolism associated domain NG828_13285 PF01258 Prokaryotic dksA/traR C4-type zinc finger NG828_13290 PF01809 Putative membrane protein insertion efficiency factor NG828_13295 PF01979 Amidohydrolase family NG828_13300 PF01551 Peptidase family M23 NG828_13300 PF08460 Bacterial SH3 domain NG828_13310 PF07694 5TMR of 5TMR-LYT NG828_13310 PF00990 Diguanylate cyclase, GGDEF domain NG828_13315 PF01095 Pectinesterase NG828_13325 PF13419 Haloacid dehalogenase-like hydrolase NG828_13335 PF01979 Amidohydrolase family NG828_13340 PF06736 Protein of unknown function (DUF1211) NG828_13345 PF09285 Elongation factor P, C-terminal NG828_13345 PF08207 Elongation factor P (EF-P) KOW-like domain NG828_13345 PF01132 Elongation factor P (EF-P) OB domain NG828_13350 PF04055 Radical SAM superfamily NG828_13355 PF00990 Diguanylate cyclase, GGDEF domain NG828_13355 PF00563 EAL domain NG828_13355 PF03707 Bacterial signalling protein N terminal repeat NG828_13365 PF00588 SpoU rRNA Methylase family NG828_13370 PF00459 Inositol monophosphatase family NG828_13375 PF02203 Tar ligand binding domain homologue NG828_13375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG828_13375 PF00672 HAMP domain NG828_13380 PF07549 SecD/SecF GG Motif NG828_13380 PF02355 Protein export membrane protein NG828_13385 PF13721 SecD export protein N-terminal TM region NG828_13385 PF07549 SecD/SecF GG Motif NG828_13385 PF02355 Protein export membrane protein NG828_13390 PF02699 Preprotein translocase subunit NG828_13395 PF01702 Queuine tRNA-ribosyltransferase NG828_13400 PF00005 ABC transporter NG828_13400 PF00664 ABC transporter transmembrane region NG828_13405 PF00144 Beta-lactamase NG828_13415 PF03812 2-keto-3-deoxygluconate permease NG828_13425 PF00072 Response regulator receiver domain NG828_13425 PF00990 Diguanylate cyclase, GGDEF domain NG828_13430 PF01479 S4 domain NG828_13430 PF00849 RNA pseudouridylate synthase NG828_13435 PF00270 DEAD/DEAH box helicase NG828_13435 PF00271 Helicase conserved C-terminal domain NG828_13435 PF03880 DbpA RNA binding domain NG828_13450 PF01494 FAD binding domain NG828_13475 PF02805 Metal binding domain of Ada NG828_13475 PF06029 AlkA N-terminal domain NG828_13475 PF00730 HhH-GPD superfamily base excision DNA repair protein NG828_13475 PF12833 Helix-turn-helix domain NG828_13480 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NG828_13480 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NG828_13490 PF00654 Voltage gated chloride channel NG828_13505 PF07715 TonB-dependent Receptor Plug Domain NG828_13505 PF00593 TonB dependent receptor NG828_13510 PF00893 Small Multidrug Resistance protein NG828_13520 PF00111 2Fe-2S iron-sulfur cluster binding domain NG828_13520 PF01799 [2Fe-2S] binding domain NG828_13520 PF10518 TAT (twin-arginine translocation) pathway signal sequence NG828_13525 PF03450 CO dehydrogenase flavoprotein C-terminal domain NG828_13525 PF00941 FAD binding domain in molybdopterin dehydrogenase NG828_13530 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NG828_13530 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NG828_13535 PF12804 MobA-like NTP transferase domain NG828_13540 PF13478 XdhC Rossmann domain NG828_13540 PF02625 XdhC and CoxI family NG828_13545 PF06224 Winged helix DNA-binding domain NG828_13555 PF07694 5TMR of 5TMR-LYT NG828_13555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG828_13555 PF13492 GAF domain NG828_13555 PF06580 Histidine kinase NG828_13560 PF04397 LytTr DNA-binding domain NG828_13560 PF00072 Response regulator receiver domain NG828_13565 PF01137 RNA 3'-terminal phosphate cyclase NG828_13565 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain NG828_13570 PF01139 tRNA-splicing ligase RtcB NG828_13580 PF06956 Regulator of RNA terminal phosphate cyclase NG828_13580 PF00158 Sigma-54 interaction domain NG828_13585 PF01475 Ferric uptake regulator family NG828_13590 PF00749 tRNA synthetases class I (E and Q), catalytic domain NG828_13610 PF06123 Inner membrane protein CreD NG828_13615 PF00672 HAMP domain NG828_13615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG828_13615 PF00512 His Kinase A (phospho-acceptor) domain NG828_13620 PF00072 Response regulator receiver domain NG828_13620 PF00486 Transcriptional regulatory protein, C terminal NG828_13625 PF00990 Diguanylate cyclase, GGDEF domain NG828_13630 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ NG828_13635 PF09234 Domain of unknown function (DUF1963) NG828_13645 PF17757 UvrB interaction domain NG828_13645 PF03461 TRCF domain NG828_13645 PF02559 CarD-like/TRCF domain NG828_13645 PF00270 DEAD/DEAH box helicase NG828_13645 PF00271 Helicase conserved C-terminal domain NG828_13655 PF01584 CheW-like domain NG828_13655 PF02895 Signal transducing histidine kinase, homodimeric domain NG828_13655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG828_13655 PF01627 Hpt domain NG828_13660 PF00672 HAMP domain NG828_13660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG828_13660 PF13426 PAS domain NG828_13665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG828_13665 PF00672 HAMP domain NG828_13670 PF12729 Four helix bundle sensory module for signal transduction NG828_13670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG828_13670 PF00672 HAMP domain NG828_13675 PF01584 CheW-like domain NG828_13680 PF00563 EAL domain NG828_13680 PF03707 Bacterial signalling protein N terminal repeat NG828_13680 PF00990 Diguanylate cyclase, GGDEF domain NG828_13685 PF01739 CheR methyltransferase, SAM binding domain NG828_13685 PF03705 CheR methyltransferase, all-alpha domain NG828_13690 PF00072 Response regulator receiver domain NG828_13690 PF01339 CheB methylesterase NG828_13695 PF02311 AraC-like ligand binding domain NG828_13695 PF12833 Helix-turn-helix domain NG828_13705 PF07944 Beta-L-arabinofuranosidase, GH127 NG828_13710 PF17837 4'-phosphopantetheinyl transferase N-terminal domain NG828_13710 PF01648 4'-phosphopantetheinyl transferase superfamily NG828_13720 PF00300 Histidine phosphatase superfamily (branch 1) NG828_13725 PF04493 Endonuclease V NG828_13730 PF02678 Pirin NG828_13730 PF05726 Pirin C-terminal cupin domain NG828_13740 PF02678 Pirin NG828_13740 PF05726 Pirin C-terminal cupin domain NG828_13745 PF02554 Carbon starvation protein CstA NG828_13745 PF13722 5TM C-terminal transporter carbon starvation CstA NG828_13750 PF04328 Selenoprotein, putative NG828_13775 PF00326 Prolyl oligopeptidase family NG828_13775 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region NG828_13775 PF07676 WD40-like Beta Propeller Repeat NG828_13780 PF03169 OPT oligopeptide transporter protein NG828_13785 PF00854 POT family NG828_13805 PF00356 Bacterial regulatory proteins, lacI family NG828_13815 PF03825 Nucleoside H+ symporter NG828_13820 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NG828_13820 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NG828_13830 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NG828_13845 PF05199 GMC oxidoreductase NG828_13845 PF00732 GMC oxidoreductase NG828_13855 PF00436 Single-strand binding protein family NG828_13860 PF00348 Polyprenyl synthetase NG828_13875 PF08245 Mur ligase middle domain NG828_13890 PF00696 Amino acid kinase family NG828_13890 PF01842 ACT domain NG828_13900 PF02567 Phenazine biosynthesis-like protein NG828_13910 PF02566 OsmC-like protein NG828_13925 PF08525 Opacity-associated protein A N-terminal motif NG828_13925 PF01476 LysM domain NG828_13925 PF01551 Peptidase family M23 NG828_13940 PF01965 DJ-1/PfpI family NG828_13955 PF01458 Uncharacterized protein family (UPF0051) NG828_13960 PF00005 ABC transporter NG828_13965 PF01458 Uncharacterized protein family (UPF0051) NG828_13970 PF00266 Aminotransferase class-V NG828_13980 PF00355 Rieske [2Fe-2S] domain NG828_13985 PF02203 Tar ligand binding domain homologue NG828_13985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG828_13985 PF00672 HAMP domain NG828_13995 PF02927 Cellulase N-terminal ig-like domain NG828_13995 PF00759 Glycosyl hydrolase family 9 NG828_14000 PF02321 Outer membrane efflux protein NG828_14005 PF13533 Biotin-lipoyl like NG828_14010 PF00873 AcrB/AcrD/AcrF family NG828_14015 PF00072 Response regulator receiver domain NG828_14015 PF00486 Transcriptional regulatory protein, C terminal NG828_14020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG828_14020 PF00672 HAMP domain NG828_14020 PF00512 His Kinase A (phospho-acceptor) domain NG828_14035 PF00037 4Fe-4S binding domain NG828_14045 PF01467 Cytidylyltransferase-like NG828_14055 PF00183 Hsp90 protein NG828_14055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG828_14065 PF02615 Malate/L-lactate dehydrogenase NG828_14070 PF07715 TonB-dependent Receptor Plug Domain NG828_14070 PF00593 TonB dependent receptor NG828_14085 PF04616 Glycosyl hydrolases family 43 NG828_14090 PF07532 Bacterial Ig-like domain (group 4) NG828_14095 PF07715 TonB-dependent Receptor Plug Domain NG828_14095 PF00593 TonB dependent receptor NG828_14115 PF13520 Amino acid permease NG828_14130 PF00557 Metallopeptidase family M24 NG828_14130 PF01321 Creatinase/Prolidase N-terminal domain NG828_14135 PF00171 Aldehyde dehydrogenase family NG828_14140 PF00701 Dihydrodipicolinate synthetase family NG828_14145 PF07992 Pyridine nucleotide-disulphide oxidoreductase NG828_14145 PF17806 Sarcosine oxidase A3 domain NG828_14155 PF01266 FAD dependent oxidoreductase NG828_14160 PF05544 Proline racemase NG828_14170 PF00448 SRP54-type protein, GTPase domain NG828_14170 PF02881 SRP54-type protein, helical bundle domain NG828_14175 PF00633 Helix-hairpin-helix motif NG828_14175 PF10576 Iron-sulfur binding domain of endonuclease III NG828_14175 PF00730 HhH-GPD superfamily base excision DNA repair protein NG828_14175 PF14815 NUDIX domain NG828_14180 PF04362 Bacterial Fe(2+) trafficking NG828_14200 PF01612 3'-5' exonuclease NG828_14200 PF00570 HRDC domain NG828_14220 PF01584 CheW-like domain NG828_14225 PF17202 Single cache domain 3 NG828_14225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG828_14225 PF00672 HAMP domain NG828_14230 PF02743 Cache domain NG828_14230 PF00672 HAMP domain NG828_14230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG828_14235 PF00270 DEAD/DEAH box helicase NG828_14235 PF08494 DEAD/H associated NG828_14235 PF00271 Helicase conserved C-terminal domain NG828_14245 PF13188 PAS domain NG828_14245 PF03707 Bacterial signalling protein N terminal repeat NG828_14245 PF00563 EAL domain NG828_14245 PF00990 Diguanylate cyclase, GGDEF domain NG828_14250 PF00013 KH domain NG828_14250 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain NG828_14250 PF01138 3' exoribonuclease family, domain 1 NG828_14250 PF03725 3' exoribonuclease family, domain 2 NG828_14250 PF00575 S1 RNA binding domain NG828_14255 PF00312 Ribosomal protein S15 NG828_14260 PF09157 Pseudouridine synthase II TruB, C-terminal NG828_14260 PF16198 tRNA pseudouridylate synthase B C-terminal domain NG828_14260 PF01509 TruB family pseudouridylate synthase (N terminal domain) NG828_14265 PF02033 Ribosome-binding factor A NG828_14270 PF08364 Bacterial translation initiation factor IF-2 associated region NG828_14270 PF00009 Elongation factor Tu GTP binding domain NG828_14270 PF11987 Translation-initiation factor 2 NG828_14270 PF04760 Translation initiation factor IF-2, N-terminal region NG828_14275 PF00575 S1 RNA binding domain NG828_14275 PF13184 NusA-like KH domain NG828_14275 PF08529 NusA N-terminal domain NG828_14280 PF17384 RimP C-terminal SH3 domain NG828_14280 PF02576 RimP N-terminal domain NG828_14290 PF00361 Proton-conducting membrane transporter NG828_14295 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus NG828_14295 PF00361 Proton-conducting membrane transporter NG828_14300 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NG828_14300 PF00361 Proton-conducting membrane transporter NG828_14305 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NG828_14310 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 NG828_14315 PF12838 4Fe-4S dicluster domain NG828_14320 PF00146 NADH dehydrogenase NG828_14325 PF00384 Molybdopterin oxidoreductase NG828_14325 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NG828_14325 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal NG828_14330 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NG828_14330 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region NG828_14330 PF10531 SLBB domain NG828_14340 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NG828_14345 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit NG828_14350 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit NG828_14355 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 NG828_14370 PF00121 Triosephosphate isomerase NG828_14390 PF00563 EAL domain NG828_14390 PF00990 Diguanylate cyclase, GGDEF domain NG828_14390 PF03707 Bacterial signalling protein N terminal repeat NG828_14405 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NG828_14405 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NG828_14405 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NG828_14405 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NG828_14410 PF17848 Acetyl-coA carboxylase zinc finger domain NG828_14410 PF01039 Carboxyl transferase domain NG828_14415 PF00290 Tryptophan synthase alpha chain NG828_14420 PF00291 Pyridoxal-phosphate dependent enzyme NG828_14425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NG828_14425 PF03466 LysR substrate binding domain NG828_14430 PF05816 Toxic anion resistance protein (TelA) NG828_14455 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase NG828_14460 PF01416 tRNA pseudouridine synthase NG828_14470 PF01118 Semialdehyde dehydrogenase, NAD binding domain NG828_14470 PF02774 Semialdehyde dehydrogenase, dimerisation domain NG828_14475 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NG828_14475 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NG828_14480 PF01264 Chorismate synthase NG828_14485 PF05175 Methyltransferase small domain NG828_14490 PF02630 SCO1/SenC NG828_14495 PF02666 Phosphatidylserine decarboxylase NG828_14500 PF06737 Transglycosylase-like domain NG828_14505 PF05872 Bacterial protein of unknown function (DUF853) NG828_14515 PF00293 NUDIX domain NG828_14530 PF01272 Transcription elongation factor, GreA/GreB, C-term NG828_14530 PF03449 Transcription elongation factor, N-terminal NG828_14535 PF04055 Radical SAM superfamily NG828_14535 PF18693 TRAM domain NG828_14535 PF00919 Uncharacterized protein family UPF0004 NG828_14540 PF01738 Dienelactone hydrolase family NG828_14555 PF06271 RDD family NG828_14560 PF00692 dUTPase NG828_14565 PF10609 NUBPL iron-transfer P-loop NTPase NG828_14570 PF07715 TonB-dependent Receptor Plug Domain NG828_14570 PF00593 TonB dependent receptor NG828_14580 PF13181 Tetratricopeptide repeat NG828_14590 PF00593 TonB dependent receptor NG828_14590 PF07715 TonB-dependent Receptor Plug Domain NG828_14605 PF05649 Peptidase family M13 NG828_14605 PF01431 Peptidase family M13 NG828_14630 PF07992 Pyridine nucleotide-disulphide oxidoreductase NG828_14630 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NG828_14635 PF04235 Protein of unknown function (DUF418) NG828_14640 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NG828_14645 PF00877 NlpC/P60 family NG828_14650 PF00877 NlpC/P60 family NG828_14655 PF01209 ubiE/COQ5 methyltransferase family NG828_14665 PF03061 Thioesterase superfamily NG828_14675 PF00375 Sodium:dicarboxylate symporter family NG828_14680 PF00245 Alkaline phosphatase NG828_14690 PF01171 PP-loop family NG828_14690 PF09179 TilS substrate binding domain NG828_14690 PF11734 TilS substrate C-terminal domain NG828_14695 PF02609 Exonuclease VII small subunit NG828_14700 PF00348 Polyprenyl synthetase NG828_14705 PF14521 Lysine-specific metallo-endopeptidase NG828_14730 PF01523 Putative modulator of DNA gyrase NG828_14735 PF04751 Protein of unknown function (DUF615) NG828_14740 PF01523 Putative modulator of DNA gyrase NG828_14750 PF10150 Ribonuclease E/G family NG828_14750 PF00575 S1 RNA binding domain NG828_14755 PF02545 Maf-like protein NG828_14760 PF04402 Protein of unknown function (DUF541) NG828_14770 PF00593 TonB dependent receptor NG828_14770 PF07715 TonB-dependent Receptor Plug Domain NG828_14775 PF02590 Predicted SPOUT methyltransferase NG828_14790 PF01467 Cytidylyltransferase-like NG828_14805 PF13603 Leucyl-tRNA synthetase, Domain 2 NG828_14805 PF08264 Anticodon-binding domain of tRNA NG828_14805 PF00133 tRNA synthetases class I (I, L, M and V) NG828_14815 PF00085 Thioredoxin NG828_14825 PF00990 Diguanylate cyclase, GGDEF domain NG828_14825 PF01590 GAF domain NG828_14825 PF00563 EAL domain NG828_14825 PF00360 Phytochrome region NG828_14840 PF02592 Putative vitamin uptake transporter NG828_14850 PF02574 Homocysteine S-methyltransferase NG828_14860 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NG828_14870 PF01588 Putative tRNA binding domain NG828_14870 PF09334 tRNA synthetases class I (M) NG828_14880 PF04060 Putative Fe-S cluster NG828_14895 PF04545 Sigma-70, region 4 NG828_14895 PF04542 Sigma-70 region 2 NG828_14940 PF01042 Endoribonuclease L-PSP NG828_14950 PF03706 Lysylphosphatidylglycerol synthase TM region NG828_14985 PF07690 Major Facilitator Superfamily NG828_14990 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NG828_14995 PF03831 PhnA domain NG828_14995 PF08274 PhnA Zinc-Ribbon NG828_15005 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NG828_15040 PF01258 Prokaryotic dksA/traR C4-type zinc finger NG828_15050 PF01863 Protein of unknown function DUF45 NG828_15055 PF00849 RNA pseudouridylate synthase NG828_15055 PF01479 S4 domain NG828_15065 PF13360 PQQ-like domain NG828_15070 PF00593 TonB dependent receptor NG828_15070 PF07715 TonB-dependent Receptor Plug Domain NG828_15085 PF07043 Protein of unknown function (DUF1328) NG828_15120 PF01642 Methylmalonyl-CoA mutase NG828_15120 PF02310 B12 binding domain NG828_15130 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NG828_15130 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NG828_15135 PF00082 Subtilase family NG828_15135 PF03797 Autotransporter beta-domain NG828_15135 PF12951 Passenger-associated-transport-repeat NG828_15140 PF00108 Thiolase, N-terminal domain NG828_15140 PF02803 Thiolase, C-terminal domain NG828_15155 PF00990 Diguanylate cyclase, GGDEF domain NG828_15155 PF00072 Response regulator receiver domain NG828_15170 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NG828_15170 PF02770 Acyl-CoA dehydrogenase, middle domain NG828_15170 PF18158 Adaptive response protein AidB N-terminal domain NG828_15175 PF04679 ATP dependent DNA ligase C terminal region NG828_15175 PF01068 ATP dependent DNA ligase domain NG828_15175 PF04675 DNA ligase N terminus NG828_15180 PF04679 ATP dependent DNA ligase C terminal region NG828_15180 PF01068 ATP dependent DNA ligase domain NG828_15180 PF04675 DNA ligase N terminus NG828_15185 PF08494 DEAD/H associated NG828_15185 PF00270 DEAD/DEAH box helicase NG828_15185 PF00271 Helicase conserved C-terminal domain NG828_15195 PF01494 FAD binding domain NG828_15200 PF00313 'Cold-shock' DNA-binding domain NG828_15205 PF01048 Phosphorylase superfamily NG828_15210 PF00156 Phosphoribosyl transferase domain NG828_15215 PF00933 Glycosyl hydrolase family 3 N terminal domain NG828_15225 PF01928 CYTH domain NG828_15230 PF05958 tRNA (Uracil-5-)-methyltransferase NG828_15240 PF07715 TonB-dependent Receptor Plug Domain NG828_15240 PF00593 TonB dependent receptor NG828_15250 PF07650 KH domain NG828_15250 PF01926 50S ribosome-binding GTPase NG828_15255 PF00035 Double-stranded RNA binding motif NG828_15255 PF14622 Ribonuclease-III-like NG828_15265 PF10502 Signal peptidase, peptidase S26 NG828_15270 PF00009 Elongation factor Tu GTP binding domain NG828_15270 PF03144 Elongation factor Tu domain 2 NG828_15270 PF00679 Elongation factor G C-terminus NG828_15270 PF06421 GTP-binding protein LepA C-terminus NG828_15275 PF17820 PDZ domain NG828_15275 PF13180 PDZ domain NG828_15285 PF04542 Sigma-70 region 2 NG828_15285 PF08281 Sigma-70, region 4 NG828_15290 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NG828_15290 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NG828_15290 PF00378 Enoyl-CoA hydratase/isomerase NG828_15295 PF01545 Cation efflux family NG828_15305 PF03601 Conserved hypothetical protein 698 NG828_15310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NG828_15310 PF03466 LysR substrate binding domain NG828_15320 PF07745 Glycosyl hydrolase family 53 NG828_15325 PF02837 Glycosyl hydrolases family 2, sugar binding domain NG828_15325 PF02836 Glycosyl hydrolases family 2, TIM barrel domain NG828_15325 PF16355 Domain of unknown function (DUF4982) NG828_15325 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 NG828_15325 PF00703 Glycosyl hydrolases family 2 NG828_15335 PF01624 MutS domain I NG828_15335 PF05188 MutS domain II NG828_15335 PF05192 MutS domain III NG828_15335 PF05190 MutS family domain IV NG828_15335 PF00488 MutS domain V NG828_15340 PF13417 Glutathione S-transferase, N-terminal domain NG828_15350 PF00004 ATPase family associated with various cellular activities (AAA) NG828_15350 PF07724 AAA domain (Cdc48 subfamily) NG828_15350 PF17871 AAA lid domain NG828_15350 PF02861 Clp amino terminal domain, pathogenicity island component NG828_15350 PF10431 C-terminal, D2-small domain, of ClpB protein NG828_15355 PF00141 Peroxidase NG828_15360 PF01479 S4 domain NG828_15365 PF01554 MatE NG828_15370 PF01245 Ribosomal protein L19 NG828_15375 PF01746 tRNA (Guanine-1)-methyltransferase NG828_15380 PF05239 PRC-barrel domain NG828_15380 PF01782 RimM N-terminal domain NG828_15385 PF00886 Ribosomal protein S16 NG828_15395 PF03060 Nitronate monooxygenase NG828_15405 PF00448 SRP54-type protein, GTPase domain NG828_15405 PF02881 SRP54-type protein, helical bundle domain NG828_15405 PF02978 Signal peptide binding domain NG828_15410 PF01578 Cytochrome C assembly protein NG828_15415 PF01263 Aldose 1-epimerase NG828_15420 PF06964 Alpha-L-arabinofuranosidase C-terminal domain NG828_15430 PF00679 Elongation factor G C-terminus NG828_15430 PF03144 Elongation factor Tu domain 2 NG828_15430 PF03764 Elongation factor G, domain IV NG828_15430 PF00009 Elongation factor Tu GTP binding domain NG828_15430 PF14492 Elongation Factor G, domain II NG828_15440 PF00999 Sodium/hydrogen exchanger family NG828_15450 PF00043 Glutathione S-transferase, C-terminal domain NG828_15450 PF13417 Glutathione S-transferase, N-terminal domain NG828_15455 PF02653 Branched-chain amino acid transport system / permease component NG828_15460 PF02653 Branched-chain amino acid transport system / permease component NG828_15465 PF00005 ABC transporter NG828_15470 PF13407 Periplasmic binding protein domain NG828_15475 PF00171 Aldehyde dehydrogenase family NG828_15495 PF00920 Dehydratase family NG828_15500 PF04542 Sigma-70 region 2 NG828_15500 PF08281 Sigma-70, region 4 NG828_15510 PF07715 TonB-dependent Receptor Plug Domain NG828_15510 PF07660 Secretin and TonB N terminus short domain NG828_15510 PF00593 TonB dependent receptor NG828_15515 PF00328 Histidine phosphatase superfamily (branch 2) NG828_15525 PF18073 Rubredoxin metal binding domain NG828_15530 PF02224 Cytidylate kinase NG828_15535 PF13180 PDZ domain NG828_15535 PF03572 Peptidase family S41 NG828_15540 PF00574 Clp protease NG828_15545 PF12680 SnoaL-like domain NG828_15545 PF08281 Sigma-70, region 4 NG828_15545 PF04542 Sigma-70 region 2 NG828_15560 PF03626 Prokaryotic Cytochrome C oxidase subunit IV NG828_15565 PF00510 Cytochrome c oxidase subunit III NG828_15570 PF00115 Cytochrome C and Quinol oxidase polypeptide I NG828_15575 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NG828_15575 PF06481 COX Aromatic Rich Motif NG828_15615 PF02401 LytB protein NG828_15620 PF01252 Signal peptidase (SPase) II NG828_15625 PF00133 tRNA synthetases class I (I, L, M and V) NG828_15625 PF06827 Zinc finger found in FPG and IleRS NG828_15625 PF08264 Anticodon-binding domain of tRNA NG828_15630 PF06574 FAD synthetase NG828_15630 PF01687 Riboflavin kinase NG828_15635 PF03023 Lipid II flippase MurJ NG828_15640 PF01649 Ribosomal protein S20 NG828_15645 PF01018 GTP1/OBG NG828_15645 PF01926 50S ribosome-binding GTPase NG828_15650 PF01016 Ribosomal L27 protein NG828_15655 PF00829 Ribosomal prokaryotic L21 protein NG828_15660 PF00005 ABC transporter NG828_15660 PF17760 UvrA interaction domain NG828_15660 PF17755 UvrA DNA-binding domain NG828_15675 PF00378 Enoyl-CoA hydratase/isomerase NG828_15695 PF04376 Arginine-tRNA-protein transferase, N terminus NG828_15695 PF04377 Arginine-tRNA-protein transferase, C terminus NG828_15710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG828_15710 PF08447 PAS fold NG828_15730 PF02222 ATP-grasp domain NG828_15730 PF01370 NAD dependent epimerase/dehydratase family NG828_15735 PF00355 Rieske [2Fe-2S] domain NG828_15735 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NG828_15775 PF01636 Phosphotransferase enzyme family NG828_15805 PF00072 Response regulator receiver domain NG828_15805 PF00196 Bacterial regulatory proteins, luxR family NG828_15810 PF07730 Histidine kinase NG828_15820 PF03775 Septum formation inhibitor MinC, C-terminal domain NG828_15820 PF05209 Septum formation inhibitor MinC, N-terminal domain NG828_15825 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NG828_15830 PF03776 Septum formation topological specificity factor MinE NG828_15840 PF13493 Domain of unknown function (DUF4118) NG828_15840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG828_15840 PF00512 His Kinase A (phospho-acceptor) domain NG828_15840 PF02702 Osmosensitive K+ channel His kinase sensor domain NG828_15845 PF00072 Response regulator receiver domain NG828_15845 PF00486 Transcriptional regulatory protein, C terminal NG828_15855 PF08019 Phosphoethanolamine transferase EptA/EptB NG828_15855 PF00884 Sulfatase NG828_15910 PF07690 Major Facilitator Superfamily NG828_15915 PF02347 Glycine cleavage system P-protein NG828_15920 PF00199 Catalase NG828_15920 PF06628 Catalase-related immune-responsive NG828_15920 PF18011 C-terminal domain found in long catalases NG828_15925 PF08240 Alcohol dehydrogenase GroES-like domain NG828_15925 PF13823 Alcohol dehydrogenase GroES-associated NG828_15925 PF00107 Zinc-binding dehydrogenase NG828_15960 PF01915 Glycosyl hydrolase family 3 C-terminal domain NG828_15960 PF00933 Glycosyl hydrolase family 3 N terminal domain NG828_15960 PF14310 Fibronectin type III-like domain NG828_15965 PF17755 UvrA DNA-binding domain NG828_16020 PF00990 Diguanylate cyclase, GGDEF domain NG828_16030 PF00709 Adenylosuccinate synthetase NG828_16040 PF01145 SPFH domain / Band 7 family NG828_16045 PF12221 Bacterial membrane protein N terminal NG828_16045 PF01145 SPFH domain / Band 7 family NG828_16050 PF08240 Alcohol dehydrogenase GroES-like domain NG828_16050 PF00107 Zinc-binding dehydrogenase NG828_16055 PF00072 Response regulator receiver domain NG828_16060 PF00226 DnaJ domain NG828_16060 PF01556 DnaJ C terminal domain NG828_16070 PF08534 Redoxin NG828_16080 PF06832 Penicillin-Binding Protein C-terminus Family NG828_16080 PF00912 Transglycosylase NG828_16080 PF00905 Penicillin binding protein transpeptidase domain NG828_16085 PF00989 PAS fold NG828_16085 PF00512 His Kinase A (phospho-acceptor) domain NG828_16085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG828_16090 PF02954 Bacterial regulatory protein, Fis family NG828_16090 PF00072 Response regulator receiver domain NG828_16090 PF00158 Sigma-54 interaction domain NG828_16100 PF02687 FtsX-like permease family NG828_16100 PF00005 ABC transporter NG828_16100 PF12704 MacB-like periplasmic core domain NG828_16125 PF07703 Alpha-2-macroglobulin bait region domain NG828_16125 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain NG828_16125 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain NG828_16125 PF11974 Bacterial alpha-2-macroglobulin MG3 domain NG828_16125 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain NG828_16125 PF01835 MG2 domain NG828_16125 PF00207 Alpha-2-macroglobulin family NG828_16125 PF17962 Bacterial macroglobulin domain 6 NG828_16135 PF07715 TonB-dependent Receptor Plug Domain NG828_16135 PF00593 TonB dependent receptor NG828_16145 PF04303 PrpF protein NG828_16155 PF00330 Aconitase family (aconitate hydratase) NG828_16155 PF00694 Aconitase C-terminal domain NG828_16160 PF00285 Citrate synthase, C-terminal domain NG828_16180 PF00717 Peptidase S24-like NG828_16180 PF01726 LexA DNA binding domain NG828_16195 PF02811 PHP domain NG828_16195 PF07733 Bacterial DNA polymerase III alpha NTPase domain NG828_16195 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NG828_16195 PF14579 Helix-hairpin-helix motif NG828_16205 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NG828_16205 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NG828_16210 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system NG828_16215 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system NG828_16230 PF09115 DNA polymerase III, delta subunit, C terminal NG828_16235 PF02223 Thymidylate kinase NG828_16240 PF02618 YceG-like family NG828_16245 PF04715 Anthranilate synthase component I, N terminal region NG828_16245 PF00425 chorismate binding enzyme NG828_16250 PF00109 Beta-ketoacyl synthase, N-terminal domain NG828_16250 PF02801 Beta-ketoacyl synthase, C-terminal domain NG828_16255 PF00550 Phosphopantetheine attachment site NG828_16265 PF00698 Acyl transferase domain NG828_16270 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NG828_16270 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NG828_16275 PF01783 Ribosomal L32p protein family NG828_16280 PF02620 Large ribosomal RNA subunit accumulation protein YceD NG828_16285 PF02545 Maf-like protein NG828_16305 PF17863 AAA lid domain NG828_16305 PF07726 ATPase family associated with various cellular activities (AAA) NG828_16315 PF13559 Domain of unknown function (DUF4129) NG828_16315 PF11992 Domain of unknown function (DUF3488) NG828_16315 PF01841 Transglutaminase-like superfamily NG828_16325 PF01230 HIT domain NG828_16330 PF02132 RecR protein NG828_16330 PF13662 Toprim domain NG828_16335 PF02575 YbaB/EbfC DNA-binding family NG828_16340 PF12170 DNA polymerase III tau subunit V interacting with alpha NG828_16340 PF12169 DNA polymerase III subunits gamma and tau domain III NG828_16340 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding NG828_16435 PF02391 MoaE protein NG828_16440 PF02597 ThiS family NG828_16445 PF01967 MoaC family NG828_16455 PF06463 Molybdenum Cofactor Synthesis C NG828_16455 PF04055 Radical SAM superfamily NG828_16460 PF12706 Beta-lactamase superfamily domain NG828_16470 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NG828_16495 PF00929 Exonuclease NG828_16500 PF00075 RNase H NG828_16510 PF16123 Hydroxyacylglutathione hydrolase C-terminus NG828_16510 PF00753 Metallo-beta-lactamase superfamily NG828_16520 PF13145 PPIC-type PPIASE domain NG828_16540 PF00216 Bacterial DNA-binding protein NG828_16545 PF00004 ATPase family associated with various cellular activities (AAA) NG828_16545 PF02190 ATP-dependent protease La (LON) substrate-binding domain NG828_16545 PF05362 Lon protease (S16) C-terminal proteolytic domain NG828_16550 PF07724 AAA domain (Cdc48 subfamily) NG828_16550 PF06689 ClpX C4-type zinc finger NG828_16550 PF10431 C-terminal, D2-small domain, of ClpB protein NG828_16555 PF00574 Clp protease NG828_16560 PF05698 Bacterial trigger factor protein (TF) C-terminus NG828_16560 PF05697 Bacterial trigger factor protein (TF) NG828_16595 PF18324 Hypothetical protein TT1725 NG828_16595 PF00180 Isocitrate/isopropylmalate dehydrogenase NG828_16605 PF00462 Glutaredoxin NG828_16610 PF13181 Tetratricopeptide repeat NG828_16610 PF01435 Peptidase family M48 NG828_16615 PF00486 Transcriptional regulatory protein, C terminal NG828_16615 PF00072 Response regulator receiver domain NG828_16620 PF11808 Phosphate regulon sensor protein PhoR NG828_16620 PF00512 His Kinase A (phospho-acceptor) domain NG828_16620 PF00989 PAS fold NG828_16620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG828_16625 PF17941 Polyphosphate kinase C-terminal domain 1 NG828_16625 PF13089 Polyphosphate kinase N-terminal domain NG828_16625 PF02503 Polyphosphate kinase middle domain NG828_16625 PF13090 Polyphosphate kinase C-terminal domain 2 NG828_16630 PF02541 Ppx/GppA phosphatase family NG828_16635 PF13439 Glycosyltransferase Family 4 NG828_16635 PF00534 Glycosyl transferases group 1 NG828_16640 PF01569 PAP2 superfamily NG828_16645 PF00149 Calcineurin-like phosphoesterase NG828_16660 PF04305 Protein of unknown function (DUF455) NG828_16670 PF00156 Phosphoribosyl transferase domain NG828_16685 PF08245 Mur ligase middle domain NG828_16685 PF02875 Mur ligase family, glutamate ligase domain NG828_16695 PF00300 Histidine phosphatase superfamily (branch 1) NG828_16700 PF10459 Peptidase S46 NG828_16705 PF00107 Zinc-binding dehydrogenase NG828_16705 PF08240 Alcohol dehydrogenase GroES-like domain NG828_16715 PF00005 ABC transporter NG828_16715 PF12857 TOBE-like domain NG828_16720 PF00528 Binding-protein-dependent transport system inner membrane component NG828_16740 PF00155 Aminotransferase class I and II NG828_16750 PF00849 RNA pseudouridylate synthase NG828_16760 PF00691 OmpA family NG828_16760 PF05736 OprF membrane domain NG828_16765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NG828_16765 PF03466 LysR substrate binding domain NG828_16770 PF07690 Major Facilitator Superfamily NG828_16780 PF00248 Aldo/keto reductase family NG828_16785 PF08240 Alcohol dehydrogenase GroES-like domain NG828_16785 PF00107 Zinc-binding dehydrogenase NG828_16790 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NG828_16790 PF07992 Pyridine nucleotide-disulphide oxidoreductase NG828_16815 PF03009 Glycerophosphoryl diester phosphodiesterase family NG828_16835 PF00043 Glutathione S-transferase, C-terminal domain NG828_16835 PF02798 Glutathione S-transferase, N-terminal domain NG828_16840 PF13193 AMP-binding enzyme C-terminal domain NG828_16840 PF00501 AMP-binding enzyme NG828_16840 PF16177 Acetyl-coenzyme A synthetase N-terminus NG828_16855 PF00043 Glutathione S-transferase, C-terminal domain NG828_16855 PF02798 Glutathione S-transferase, N-terminal domain NG828_16865 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NG828_16865 PF00056 lactate/malate dehydrogenase, NAD binding domain NG828_16875 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NG828_16880 PF00679 Elongation factor G C-terminus NG828_16880 PF03144 Elongation factor Tu domain 2 NG828_16880 PF00009 Elongation factor Tu GTP binding domain NG828_16895 PF01474 Class-II DAHP synthetase family NG828_16910 PF02600 Disulfide bond formation protein DsbB NG828_16915 PF01196 Ribosomal protein L17 NG828_16920 PF01000 RNA polymerase Rpb3/RpoA insert domain NG828_16920 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain NG828_16920 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain NG828_16925 PF00163 Ribosomal protein S4/S9 N-terminal domain NG828_16925 PF01479 S4 domain NG828_16930 PF00411 Ribosomal protein S11 NG828_16935 PF00416 Ribosomal protein S13/S18 NG828_16940 PF00344 SecY translocase NG828_16945 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A NG828_16950 PF00327 Ribosomal protein L30p/L7e NG828_16955 PF00333 Ribosomal protein S5, N-terminal domain NG828_16955 PF03719 Ribosomal protein S5, C-terminal domain NG828_16960 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast NG828_16965 PF00347 Ribosomal protein L6 NG828_16970 PF00410 Ribosomal protein S8 NG828_16975 PF00253 Ribosomal protein S14p/S29e NG828_16980 PF00281 Ribosomal protein L5 NG828_16980 PF00673 ribosomal L5P family C-terminus NG828_16985 PF00467 KOW motif NG828_16985 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 NG828_16990 PF00238 Ribosomal protein L14p/L23e NG828_16995 PF00366 Ribosomal protein S17 NG828_17000 PF00831 Ribosomal L29 protein NG828_17005 PF00252 Ribosomal protein L16p/L10e NG828_17010 PF00189 Ribosomal protein S3, C-terminal domain NG828_17010 PF07650 KH domain NG828_17015 PF00237 Ribosomal protein L22p/L17e NG828_17020 PF00203 Ribosomal protein S19 NG828_17025 PF00181 Ribosomal Proteins L2, RNA binding domain NG828_17025 PF03947 Ribosomal Proteins L2, C-terminal domain NG828_17030 PF00276 Ribosomal protein L23 NG828_17035 PF00573 Ribosomal protein L4/L1 family NG828_17040 PF00297 Ribosomal protein L3 NG828_17045 PF00338 Ribosomal protein S10p/S20e NG828_17050 PF00009 Elongation factor Tu GTP binding domain NG828_17050 PF03144 Elongation factor Tu domain 2 NG828_17050 PF03143 Elongation factor Tu C-terminal domain NG828_17055 PF03144 Elongation factor Tu domain 2 NG828_17055 PF00679 Elongation factor G C-terminus NG828_17055 PF14492 Elongation Factor G, domain II NG828_17055 PF03764 Elongation factor G, domain IV NG828_17055 PF00009 Elongation factor Tu GTP binding domain NG828_17060 PF00177 Ribosomal protein S7p/S5e NG828_17065 PF00164 Ribosomal protein S12/S23 NG828_17070 PF04997 RNA polymerase Rpb1, domain 1 NG828_17070 PF00623 RNA polymerase Rpb1, domain 2 NG828_17070 PF04983 RNA polymerase Rpb1, domain 3 NG828_17070 PF05000 RNA polymerase Rpb1, domain 4 NG828_17070 PF04998 RNA polymerase Rpb1, domain 5 NG828_17075 PF04560 RNA polymerase Rpb2, domain 7 NG828_17075 PF00562 RNA polymerase Rpb2, domain 6 NG828_17075 PF10385 RNA polymerase beta subunit external 1 domain NG828_17075 PF04561 RNA polymerase Rpb2, domain 2 NG828_17075 PF04565 RNA polymerase Rpb2, domain 3 NG828_17075 PF04563 RNA polymerase beta subunit NG828_17080 PF00542 Ribosomal protein L7/L12 C-terminal domain NG828_17080 PF16320 Ribosomal protein L7/L12 dimerisation domain NG828_17085 PF00466 Ribosomal protein L10 NG828_17090 PF00687 Ribosomal protein L1p/L10e family NG828_17095 PF00298 Ribosomal protein L11, RNA binding domain NG828_17095 PF03946 Ribosomal protein L11, N-terminal domain NG828_17100 PF02357 Transcription termination factor nusG NG828_17100 PF00467 KOW motif NG828_17105 PF00584 SecE/Sec61-gamma subunits of protein translocation complex NG828_17135 PF01926 50S ribosome-binding GTPase NG828_17135 PF06071 Protein of unknown function (DUF933) NG828_17140 PF01195 Peptidyl-tRNA hydrolase NG828_17145 PF14693 Ribosomal protein TL5, C-terminal domain NG828_17145 PF01386 Ribosomal L25p family NG828_17150 PF14572 Phosphoribosyl synthetase-associated domain NG828_17150 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NG828_17160 PF08544 GHMP kinases C terminal NG828_17160 PF00288 GHMP kinases N terminal domain NG828_17165 PF03550 Outer membrane lipoprotein LolB NG828_17175 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain NG828_17175 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain NG828_17175 PF01488 Shikimate / quinate 5-dehydrogenase NG828_17180 PF03462 PCRF domain NG828_17180 PF00472 RF-1 domain NG828_17200 PF00994 Probable molybdopterin binding domain NG828_17210 PF03976 Polyphosphate kinase 2 (PPK2) NG828_17215 PF08534 Redoxin NG828_17220 PF03631 Virulence factor BrkB NG828_17225 PF03358 NADPH-dependent FMN reductase NG828_17240 PF04073 Aminoacyl-tRNA editing domain NG828_17245 PF04151 Bacterial pre-peptidase C-terminal domain NG828_17245 PF00082 Subtilase family NG828_17250 PF00082 Subtilase family NG828_17250 PF04151 Bacterial pre-peptidase C-terminal domain NG828_17255 PF01063 Amino-transferase class IV NG828_17270 PF02233 NAD(P) transhydrogenase beta subunit NG828_17275 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch NG828_17295 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NG828_17295 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NG828_17315 PF01367 5'-3' exonuclease, C-terminal SAM fold NG828_17315 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NG828_17315 PF00476 DNA polymerase family A NG828_17315 PF01612 3'-5' exonuclease NG828_17320 PF00293 NUDIX domain NG828_17340 PF00561 alpha/beta hydrolase fold NG828_17355 PF17827 PrmC N-terminal domain NG828_17355 PF05175 Methyltransferase small domain NG828_17360 PF10417 C-terminal domain of 1-Cys peroxiredoxin NG828_17360 PF00578 AhpC/TSA family NG828_17365 PF07992 Pyridine nucleotide-disulphide oxidoreductase NG828_17365 PF13192 Thioredoxin domain NG828_17370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NG828_17370 PF03466 LysR substrate binding domain NG828_17375 PF14760 Rnk N-terminus NG828_17375 PF01272 Transcription elongation factor, GreA/GreB, C-term NG828_17380 PF00923 Transaldolase/Fructose-6-phosphate aldolase NG828_17415 PF01625 Peptide methionine sulfoxide reductase NG828_17425 PF00072 Response regulator receiver domain NG828_17425 PF00196 Bacterial regulatory proteins, luxR family NG828_17430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG828_17430 PF00512 His Kinase A (phospho-acceptor) domain NG828_17430 PF00989 PAS fold NG828_17430 PF13188 PAS domain NG828_17430 PF13426 PAS domain NG828_17435 PF00990 Diguanylate cyclase, GGDEF domain NG828_17435 PF00072 Response regulator receiver domain NG828_17445 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain NG828_17445 PF00749 tRNA synthetases class I (E and Q), catalytic domain NG828_17475 PF01728 FtsJ-like methyltransferase NG828_17475 PF18125 RlmM ferredoxin-like domain NG828_17480 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NG828_17480 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NG828_17510 PF01494 FAD binding domain NG828_17515 PF01494 FAD binding domain NG828_17525 PF01923 Cobalamin adenosyltransferase NG828_17535 PF04453 LPS transport system D NG828_17535 PF03968 OstA-like protein NG828_17540 PF00639 PPIC-type PPIASE domain NG828_17540 PF09312 SurA N-terminal domain NG828_17545 PF04166 Pyridoxal phosphate biosynthetic protein PdxA NG828_17550 PF00398 Ribosomal RNA adenine dimethylase NG828_17555 PF04379 ApaG domain NG828_17560 PF00149 Calcineurin-like phosphoesterase NG828_17565 PF00186 Dihydrofolate reductase NG828_17570 PF00303 Thymidylate synthase NG828_17575 PF01790 Prolipoprotein diacylglyceryl transferase NG828_17590 PF04011 LemA family NG828_17595 PF03741 Integral membrane protein TerC family NG828_17600 PF01219 Prokaryotic diacylglycerol kinase NG828_17610 PF08521 Two-component sensor kinase N-terminal NG828_17610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG828_17610 PF00512 His Kinase A (phospho-acceptor) domain NG828_17615 PF00072 Response regulator receiver domain NG828_17615 PF00486 Transcriptional regulatory protein, C terminal NG828_17620 PF13472 GDSL-like Lipase/Acylhydrolase family NG828_17625 PF00005 ABC transporter NG828_17645 PF07715 TonB-dependent Receptor Plug Domain NG828_17645 PF00593 TonB dependent receptor NG828_17655 PF00248 Aldo/keto reductase family NG828_17660 PF07662 Na+ dependent nucleoside transporter C-terminus NG828_17660 PF01773 Na+ dependent nucleoside transporter N-terminus NG828_17660 PF07670 Nucleoside recognition NG828_17665 PF00294 pfkB family carbohydrate kinase NG828_17665 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) NG828_17675 PF01207 Dihydrouridine synthase (Dus) NG828_17680 PF13649 Methyltransferase domain NG828_17720 PF00438 S-adenosylmethionine synthetase, N-terminal domain NG828_17720 PF02772 S-adenosylmethionine synthetase, central domain NG828_17720 PF02773 S-adenosylmethionine synthetase, C-terminal domain NG828_17755 PF00311 Phosphoenolpyruvate carboxylase NG828_17765 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NG828_17765 PF05221 S-adenosyl-L-homocysteine hydrolase NG828_17795 PF00685 Sulfotransferase domain NG828_17810 PF00672 HAMP domain NG828_17810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG828_17830 PF00128 Alpha amylase, catalytic domain NG828_17835 PF02219 Methylenetetrahydrofolate reductase NG828_17845 PF00293 NUDIX domain NG828_17855 PF07517 SecA DEAD-like domain NG828_17855 PF01043 SecA preprotein cross-linking domain NG828_17855 PF07516 SecA Wing and Scaffold domain NG828_17855 PF02810 SEC-C motif NG828_17860 PF01476 LysM domain NG828_17860 PF08525 Opacity-associated protein A N-terminal motif NG828_17860 PF01551 Peptidase family M23 NG828_17870 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase NG828_17875 PF12327 FtsZ family, C-terminal domain NG828_17875 PF00091 Tubulin/FtsZ family, GTPase domain NG828_17880 PF02491 SHS2 domain inserted in FTSA NG828_17885 PF03799 Cell division protein FtsQ NG828_17885 PF08478 POTRA domain, FtsQ-type NG828_17890 PF01820 D-ala D-ala ligase N-terminus NG828_17890 PF07478 D-ala D-ala ligase C-terminus NG828_17895 PF02875 Mur ligase family, glutamate ligase domain NG828_17895 PF08245 Mur ligase middle domain NG828_17895 PF01225 Mur ligase family, catalytic domain NG828_17900 PF04101 Glycosyltransferase family 28 C-terminal domain NG828_17900 PF03033 Glycosyltransferase family 28 N-terminal domain NG828_17905 PF01098 Cell cycle protein NG828_17910 PF00953 Glycosyl transferase family 4 NG828_17915 PF01225 Mur ligase family, catalytic domain NG828_17915 PF02875 Mur ligase family, glutamate ligase domain NG828_17915 PF08245 Mur ligase middle domain NG828_17920 PF01225 Mur ligase family, catalytic domain NG828_17920 PF02875 Mur ligase family, glutamate ligase domain NG828_17920 PF08245 Mur ligase middle domain NG828_17925 PF03717 Penicillin-binding Protein dimerisation domain NG828_17925 PF00905 Penicillin binding protein transpeptidase domain NG828_17930 PF04999 Cell division protein FtsL NG828_17935 PF01795 MraW methylase family NG828_17940 PF02381 MraZ protein, putative antitoxin-like NG828_17965 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NG828_17975 PF02021 Uncharacterised protein family UPF0102 NG828_17980 PF04307 LexA-binding, inner membrane-associated putative hydrolase NG828_17985 PF02913 FAD linked oxidases, C-terminal domain NG828_17985 PF01565 FAD binding domain NG828_17990 PF00072 Response regulator receiver domain NG828_17990 PF00486 Transcriptional regulatory protein, C terminal NG828_17995 PF13493 Domain of unknown function (DUF4118) NG828_17995 PF13492 GAF domain NG828_17995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG828_17995 PF00512 His Kinase A (phospho-acceptor) domain NG828_17995 PF02702 Osmosensitive K+ channel His kinase sensor domain NG828_18000 PF02669 K+-transporting ATPase, c chain NG828_18010 PF03814 Potassium-transporting ATPase A subunit NG828_18030 PF00586 AIR synthase related protein, N-terminal domain NG828_18030 PF02769 AIR synthase related protein, C-terminal domain NG828_18035 PF01029 NusB family NG828_18040 PF00885 6,7-dimethyl-8-ribityllumazine synthase NG828_18045 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NG828_18045 PF00925 GTP cyclohydrolase II NG828_18050 PF00677 Lumazine binding domain NG828_18055 PF01872 RibD C-terminal domain NG828_18055 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NG828_18065 PF03477 ATP cone domain NG828_18070 PF00464 Serine hydroxymethyltransferase NG828_18085 PF07690 Major Facilitator Superfamily NG828_18090 PF12848 ABC transporter NG828_18090 PF00005 ABC transporter NG828_18095 PF01327 Polypeptide deformylase NG828_18100 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) NG828_18105 PF01270 Glycosyl hydrolases family 8 NG828_18110 PF03170 Bacterial cellulose synthase subunit NG828_18115 PF03552 Cellulose synthase NG828_18115 PF00535 Glycosyl transferase family 2 NG828_18115 PF07238 PilZ domain NG828_18130 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family NG828_18130 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain NG828_18175 PF00392 Bacterial regulatory proteins, gntR family NG828_18175 PF07702 UTRA domain NG828_18195 PF00263 Bacterial type II and III secretion system protein NG828_18195 PF03958 Bacterial type II/III secretion system short domain NG828_18205 PF10741 Type II secretion system (T2SS), protein M subtype b NG828_18210 PF05137 Fimbrial assembly protein (PilN) NG828_18215 PF03934 Type II secretion system (T2SS), protein K NG828_18225 PF07963 Prokaryotic N-terminal methylation motif NG828_18230 PF12019 Type II transport protein GspH NG828_18235 PF08334 Type II secretion system (T2SS), protein G NG828_18240 PF00482 Type II secretion system (T2SS), protein F NG828_18245 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NG828_18245 PF00437 Type II/IV secretion system protein NG828_18250 PF00082 Subtilase family NG828_18250 PF04151 Bacterial pre-peptidase C-terminal domain NG828_18255 PF13018 Extended Signal Peptide of Type V secretion system NG828_18255 PF03895 YadA-like membrane anchor domain NG828_18255 PF05658 Head domain of trimeric autotransporter adhesin NG828_18255 PF05662 Coiled stalk of trimeric autotransporter adhesin NG828_18260 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal NG828_18260 PF02769 AIR synthase related protein, C-terminal domain NG828_18260 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain NG828_18265 PF13098 Thioredoxin-like domain NG828_18265 PF10411 Disulfide bond isomerase protein N-terminus NG828_18275 PF02899 Phage integrase, N-terminal SAM-like domain NG828_18275 PF00589 Phage integrase family NG828_18300 PF02789 Cytosol aminopeptidase family, N-terminal domain NG828_18300 PF00883 Cytosol aminopeptidase family, catalytic domain NG828_18305 PF04364 DNA polymerase III chi subunit, HolC NG828_18310 PF10458 Valyl tRNA synthetase tRNA binding arm NG828_18310 PF00133 tRNA synthetases class I (I, L, M and V) NG828_18310 PF08264 Anticodon-binding domain of tRNA NG828_18320 PF00544 Pectate lyase NG828_18335 PF01066 CDP-alcohol phosphatidyltransferase NG828_18345 PF04073 Aminoacyl-tRNA editing domain NG828_18345 PF03129 Anticodon binding domain NG828_18345 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NG828_18350 PF00816 H-NS histone family NG828_18360 PF02405 Permease MlaE NG828_18365 PF00005 ABC transporter NG828_18370 PF03886 ABC-type transport auxiliary lipoprotein component NG828_18370 PF02470 MlaD protein NG828_18390 PF14307 Glycosyltransferase WbsX NG828_18390 PF05045 Rhamnan synthesis protein F NG828_18395 PF01144 Coenzyme A transferase NG828_18400 PF01144 Coenzyme A transferase NG828_18405 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NG828_18405 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NG828_18405 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NG828_18405 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NG828_18410 PF01050 Mannose-6-phosphate isomerase NG828_18410 PF00483 Nucleotidyl transferase NG828_18415 PF04321 RmlD substrate binding domain NG828_18420 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase NG828_18425 PF00483 Nucleotidyl transferase NG828_18430 PF16363 GDP-mannose 4,6 dehydratase NG828_18435 PF01012 Electron transfer flavoprotein domain NG828_18440 PF01012 Electron transfer flavoprotein domain NG828_18440 PF00766 Electron transfer flavoprotein FAD-binding domain NG828_18445 PF01040 UbiA prenyltransferase family NG828_18450 PF04030 D-arabinono-1,4-lactone oxidase NG828_18450 PF01565 FAD binding domain NG828_18455 PF00106 short chain dehydrogenase NG828_18470 PF16363 GDP-mannose 4,6 dehydratase NG828_18475 PF01501 Glycosyl transferase family 8 NG828_18475 PF00535 Glycosyl transferase family 2 NG828_18490 PF00005 ABC transporter NG828_18495 PF01061 ABC-2 type transporter NG828_18500 PF01053 Cys/Met metabolism PLP-dependent enzyme NG828_18505 PF00571 CBS domain NG828_18505 PF00291 Pyridoxal-phosphate dependent enzyme NG828_18525 PF00437 Type II/IV secretion system protein NG828_18530 PF14497 Glutathione S-transferase, C-terminal domain NG828_18530 PF02798 Glutathione S-transferase, N-terminal domain NG828_18540 PF00270 DEAD/DEAH box helicase NG828_18540 PF00271 Helicase conserved C-terminal domain NG828_18545 PF01242 6-pyruvoyl tetrahydropterin synthase NG828_18560 PF13185 GAF domain NG828_18570 PF00593 TonB dependent receptor NG828_18570 PF07715 TonB-dependent Receptor Plug Domain NG828_18575 PF13419 Haloacid dehalogenase-like hydrolase NG828_18580 PF00817 impB/mucB/samB family NG828_18580 PF11799 impB/mucB/samB family C-terminal domain NG828_18580 PF11798 IMS family HHH motif NG828_18585 PF07977 FabA-like domain NG828_18590 PF00109 Beta-ketoacyl synthase, N-terminal domain NG828_18590 PF02801 Beta-ketoacyl synthase, C-terminal domain NG828_18600 PF01432 Peptidase family M3 NG828_18605 PF00291 Pyridoxal-phosphate dependent enzyme NG828_18615 PF00403 Heavy-metal-associated domain NG828_18620 PF09278 MerR, DNA binding NG828_18620 PF00376 MerR family regulatory protein NG828_18630 PF00394 Multicopper oxidase NG828_18630 PF07731 Multicopper oxidase NG828_18630 PF07732 Multicopper oxidase NG828_18635 PF05275 Copper resistance protein B precursor (CopB) NG828_18650 PF01380 SIS domain NG828_18655 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NG828_18660 PF00005 ABC transporter NG828_18670 PF00005 ABC transporter NG828_18670 PF02687 FtsX-like permease family NG828_18670 PF12704 MacB-like periplasmic core domain NG828_18675 PF00005 ABC transporter NG828_18675 PF12704 MacB-like periplasmic core domain NG828_18675 PF02687 FtsX-like permease family NG828_18680 PF00005 ABC transporter NG828_18680 PF02687 FtsX-like permease family NG828_18680 PF12704 MacB-like periplasmic core domain NG828_18685 PF02687 FtsX-like permease family NG828_18685 PF12704 MacB-like periplasmic core domain NG828_18690 PF12704 MacB-like periplasmic core domain NG828_18690 PF02687 FtsX-like permease family NG828_18690 PF00005 ABC transporter NG828_18695 PF02687 FtsX-like permease family NG828_18695 PF00005 ABC transporter NG828_18695 PF12704 MacB-like periplasmic core domain NG828_18705 PF12704 MacB-like periplasmic core domain NG828_18705 PF02687 FtsX-like permease family NG828_18710 PF00005 ABC transporter NG828_18710 PF02687 FtsX-like permease family NG828_18710 PF12704 MacB-like periplasmic core domain NG828_18715 PF12704 MacB-like periplasmic core domain NG828_18715 PF00005 ABC transporter NG828_18715 PF02687 FtsX-like permease family NG828_18720 PF02954 Bacterial regulatory protein, Fis family NG828_18720 PF00158 Sigma-54 interaction domain NG828_18720 PF00072 Response regulator receiver domain NG828_18725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG828_18725 PF00512 His Kinase A (phospho-acceptor) domain NG828_18725 PF00989 PAS fold NG828_18740 PF00132 Bacterial transferase hexapeptide (six repeats) NG828_18740 PF14602 Hexapeptide repeat of succinyl-transferase NG828_18740 PF12804 MobA-like NTP transferase domain NG828_18755 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain NG828_18755 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain NG828_18760 PF02874 ATP synthase alpha/beta family, beta-barrel domain NG828_18760 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NG828_18765 PF00231 ATP synthase NG828_18770 PF00306 ATP synthase alpha/beta chain, C terminal domain NG828_18770 PF02874 ATP synthase alpha/beta family, beta-barrel domain NG828_18770 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NG828_18775 PF00213 ATP synthase delta (OSCP) subunit NG828_18780 PF00430 ATP synthase B/B' CF(0) NG828_18785 PF00137 ATP synthase subunit C NG828_18790 PF00119 ATP synthase A chain NG828_18810 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NG828_18810 PF07992 Pyridine nucleotide-disulphide oxidoreductase NG828_18815 PF00364 Biotin-requiring enzyme NG828_18815 PF02817 e3 binding domain NG828_18815 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NG828_18840 PF03180 NLPA lipoprotein NG828_18845 PF00528 Binding-protein-dependent transport system inner membrane component NG828_18850 PF00005 ABC transporter NG828_18850 PF09383 NIL domain NG828_18855 PF00892 EamA-like transporter family NG828_18860 PF04461 Protein of unknown function (DUF520) NG828_18865 PF01494 FAD binding domain NG828_18880 PF08240 Alcohol dehydrogenase GroES-like domain NG828_18880 PF00107 Zinc-binding dehydrogenase NG828_18885 PF00171 Aldehyde dehydrogenase family NG828_18890 PF07859 alpha/beta hydrolase fold NG828_18895 PF00106 short chain dehydrogenase NG828_18900 PF00970 Oxidoreductase FAD-binding domain NG828_18900 PF00111 2Fe-2S iron-sulfur cluster binding domain NG828_18900 PF00175 Oxidoreductase NAD-binding domain NG828_18905 PF00866 Ring hydroxylating beta subunit NG828_18910 PF00355 Rieske [2Fe-2S] domain NG828_18910 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NG828_18915 PF00775 Dioxygenase NG828_18915 PF04444 Catechol dioxygenase N terminus NG828_18920 PF02426 Muconolactone delta-isomerase NG828_18925 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NG828_18925 PF13378 Enolase C-terminal domain-like NG828_18930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NG828_18930 PF03466 LysR substrate binding domain NG828_18945 PF00849 RNA pseudouridylate synthase NG828_18945 PF01479 S4 domain NG828_18950 PF05175 Methyltransferase small domain NG828_18950 PF08468 Methyltransferase small domain N-terminal NG828_18960 PF07995 Glucose / Sorbosone dehydrogenase NG828_18970 PF01627 Hpt domain NG828_18970 PF00989 PAS fold NG828_18970 PF00072 Response regulator receiver domain NG828_18970 PF00497 Bacterial extracellular solute-binding proteins, family 3 NG828_18970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG828_18970 PF00512 His Kinase A (phospho-acceptor) domain NG828_18990 PF00842 Alanine racemase, C-terminal domain NG828_18990 PF01168 Alanine racemase, N-terminal domain NG828_18995 PF01266 FAD dependent oxidoreductase NG828_19000 PF01037 Lrp/AsnC ligand binding domain NG828_19015 PF01641 SelR domain NG828_19025 PF01618 MotA/TolQ/ExbB proton channel family NG828_19030 PF13677 Membrane MotB of proton-channel complex MotA/MotB NG828_19030 PF00691 OmpA family NG828_19055 PF01061 ABC-2 type transporter NG828_19060 PF00005 ABC transporter NG828_19070 PF01037 Lrp/AsnC ligand binding domain NG828_19080 PF00999 Sodium/hydrogen exchanger family NG828_19090 PF05711 Macrocin-O-methyltransferase (TylF) NG828_19100 PF02469 Fasciclin domain NG828_19105 PF03167 Uracil DNA glycosylase superfamily NG828_19115 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase NG828_19120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NG828_19120 PF03466 LysR substrate binding domain NG828_19125 PF03358 NADPH-dependent FMN reductase NG828_19130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NG828_19130 PF03466 LysR substrate binding domain NG828_19135 PF00248 Aldo/keto reductase family NG828_19140 PF02627 Carboxymuconolactone decarboxylase family NG828_19145 PF00248 Aldo/keto reductase family NG828_19160 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NG828_19160 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NG828_19165 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family NG828_19170 PF00753 Metallo-beta-lactamase superfamily NG828_19185 PF00990 Diguanylate cyclase, GGDEF domain NG828_19190 PF00355 Rieske [2Fe-2S] domain NG828_19195 PF03707 Bacterial signalling protein N terminal repeat NG828_19195 PF00990 Diguanylate cyclase, GGDEF domain NG828_19195 PF00563 EAL domain NG828_19220 PF07715 TonB-dependent Receptor Plug Domain NG828_19220 PF00593 TonB dependent receptor NG828_19230 PF04397 LytTr DNA-binding domain NG828_19230 PF00072 Response regulator receiver domain NG828_19235 PF07694 5TMR of 5TMR-LYT NG828_19235 PF06580 Histidine kinase NG828_19245 PF01220 Dehydroquinase class II NG828_19255 PF13520 Amino acid permease NG828_19275 PF00553 Cellulose binding domain NG828_19275 PF00150 Cellulase (glycosyl hydrolase family 5) NG828_19280 PF00553 Cellulose binding domain NG828_19280 PF00150 Cellulase (glycosyl hydrolase family 5) NG828_19285 PF00675 Insulinase (Peptidase family M16) NG828_19285 PF05193 Peptidase M16 inactive domain NG828_19300 PF01204 Trehalase NG828_19305 PF00497 Bacterial extracellular solute-binding proteins, family 3 NG828_19305 PF01464 Transglycosylase SLT domain NG828_19320 PF00497 Bacterial extracellular solute-binding proteins, family 3 NG828_19335 PF06719 AraC-type transcriptional regulator N-terminus NG828_19335 PF12833 Helix-turn-helix domain NG828_19345 PF01544 CorA-like Mg2+ transporter protein NG828_19350 PF00324 Amino acid permease NG828_19360 PF00892 EamA-like transporter family NG828_19380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NG828_19380 PF03466 LysR substrate binding domain NG828_19385 PF02525 Flavodoxin-like fold NG828_19390 PF07759 Protein of unknown function (DUF1615) NG828_19400 PF12823 Domain of unknown function (DUF3817) NG828_19400 PF03176 MMPL family NG828_19405 PF02449 Beta-galactosidase NG828_19405 PF08533 Beta-galactosidase C-terminal domain NG828_19405 PF08532 Beta-galactosidase trimerisation domain NG828_19410 PF17189 Glycosyl hydrolase family 30 beta sandwich domain NG828_19415 PF00561 alpha/beta hydrolase fold NG828_19420 PF07804 HipA-like C-terminal domain NG828_19535 PF00456 Transketolase, thiamine diphosphate binding domain NG828_19535 PF17831 Pyruvate dehydrogenase E1 component middle domain NG828_19565 PF04264 YceI-like domain NG828_19570 PF00881 Nitroreductase family NG828_19590 PF03009 Glycerophosphoryl diester phosphodiesterase family NG828_19605 PF08335 GlnD PII-uridylyltransferase NG828_19605 PF03710 Glutamate-ammonia ligase adenylyltransferase NG828_19610 PF08946 Osmosensory transporter coiled coil NG828_19610 PF00083 Sugar (and other) transporter NG828_19615 PF07690 Major Facilitator Superfamily NG828_19620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NG828_19620 PF03466 LysR substrate binding domain NG828_19630 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain NG828_19630 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain NG828_19635 PF01541 GIY-YIG catalytic domain NG828_19645 PF00793 DAHP synthetase I family NG828_19655 PF00593 TonB dependent receptor NG828_19655 PF07715 TonB-dependent Receptor Plug Domain NG828_19660 PF00118 TCP-1/cpn60 chaperonin family NG828_19665 PF00166 Chaperonin 10 Kd subunit NG828_19670 PF04231 Endonuclease I NG828_19675 PF03091 CutA1 divalent ion tolerance protein NG828_19680 PF11412 Disulphide bond corrector protein DsbC NG828_19680 PF02683 Cytochrome C biogenesis protein transmembrane region NG828_19685 PF00578 AhpC/TSA family NG828_19700 PF01220 Dehydroquinase class II NG828_19705 PF00364 Biotin-requiring enzyme NG828_19715 PF02785 Biotin carboxylase C-terminal domain NG828_19715 PF00289 Biotin carboxylase, N-terminal domain NG828_19715 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NG828_19745 PF02954 Bacterial regulatory protein, Fis family NG828_19775 PF00782 Dual specificity phosphatase, catalytic domain NG828_19780 PF12147 Putative methyltransferase NG828_19780 PF12146 Serine aminopeptidase, S33 NG828_19785 PF01066 CDP-alcohol phosphatidyltransferase NG828_19790 PF02142 MGS-like domain NG828_19790 PF01808 AICARFT/IMPCHase bienzyme NG828_19800 PF02843 Phosphoribosylglycinamide synthetase, C domain NG828_19800 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NG828_19800 PF02844 Phosphoribosylglycinamide synthetase, N domain NG828_19810 PF12805 FUSC-like inner membrane protein yccS NG828_19815 PF07690 Major Facilitator Superfamily NG828_19825 PF03466 LysR substrate binding domain NG828_19825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NG828_19865 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain NG828_19865 PF00293 NUDIX domain NG828_19865 PF09297 NADH pyrophosphatase zinc ribbon domain NG828_19870 PF01521 Iron-sulphur cluster biosynthesis NG828_19890 PF00563 EAL domain NG828_19890 PF00072 Response regulator receiver domain NG828_19890 PF00990 Diguanylate cyclase, GGDEF domain NG828_19895 PF00672 HAMP domain NG828_19895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG828_19895 PF00512 His Kinase A (phospho-acceptor) domain NG828_19895 PF01627 Hpt domain NG828_19895 PF00072 Response regulator receiver domain NG828_19895 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NG828_19900 PF00210 Ferritin-like domain NG828_19905 PF04324 BFD-like [2Fe-2S] binding domain NG828_19910 PF00293 NUDIX domain NG828_19925 PF00380 Ribosomal protein S9/S16 NG828_19930 PF00572 Ribosomal protein L13 NG828_19935 PF03232 Ubiquinone biosynthesis protein COQ7 NG828_19945 PF00893 Small Multidrug Resistance protein NG828_19950 PF02675 S-adenosylmethionine decarboxylase NG828_19955 PF00027 Cyclic nucleotide-binding domain NG828_19955 PF00325 Bacterial regulatory proteins, crp family NG828_19960 PF01925 Sulfite exporter TauE/SafE NG828_19965 PF03425 Carbohydrate binding domain (family 11) NG828_19965 PF00150 Cellulase (glycosyl hydrolase family 5) NG828_19965 PF00404 Dockerin type I domain NG828_19965 PF02156 Glycosyl hydrolase family 26 NG828_19975 PF00218 Indole-3-glycerol phosphate synthase NG828_19980 PF02885 Glycosyl transferase family, helical bundle domain NG828_19980 PF00591 Glycosyl transferase family, a/b domain NG828_19995 PF00117 Glutamine amidotransferase class-I NG828_20005 PF01212 Beta-eliminating lyase NG828_20010 PF04715 Anthranilate synthase component I, N terminal region NG828_20010 PF00425 chorismate binding enzyme NG828_20015 PF00781 Diacylglycerol kinase catalytic domain NG828_20025 PF00834 Ribulose-phosphate 3 epimerase family NG828_20030 PF01556 DnaJ C terminal domain NG828_20030 PF00226 DnaJ domain NG828_20030 PF00684 DnaJ central domain NG828_20035 PF01259 SAICAR synthetase NG828_20065 PF00361 Proton-conducting membrane transporter NG828_20065 PF13244 Domain of unknown function (DUF4040) NG828_20065 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter NG828_20065 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NG828_20070 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NG828_20075 PF00361 Proton-conducting membrane transporter NG828_20080 PF01899 Na+/H+ ion antiporter subunit NG828_20085 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) NG828_20090 PF03334 Na+/H+ antiporter subunit NG828_20095 PF01699 Sodium/calcium exchanger protein NG828_20100 PF00199 Catalase NG828_20155 PF00563 EAL domain NG828_20155 PF00360 Phytochrome region NG828_20155 PF00990 Diguanylate cyclase, GGDEF domain NG828_20155 PF01590 GAF domain NG828_20160 PF00239 Resolvase, N terminal domain NG828_20160 PF02796 Helix-turn-helix domain of resolvase NG828_20175 PF00990 Diguanylate cyclase, GGDEF domain NG828_20175 PF00072 Response regulator receiver domain NG828_20180 PF00196 Bacterial regulatory proteins, luxR family NG828_20180 PF00072 Response regulator receiver domain NG828_20185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG828_20185 PF07730 Histidine kinase NG828_20195 PF00005 ABC transporter NG828_20200 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NG828_20205 PF00005 ABC transporter NG828_20210 PF12704 MacB-like periplasmic core domain NG828_20210 PF02687 FtsX-like permease family NG828_20225 PF00892 EamA-like transporter family NG828_20230 PF00892 EamA-like transporter family NG828_20250 PF00753 Metallo-beta-lactamase superfamily NG828_20255 PF00579 tRNA synthetases class I (W and Y) NG828_20265 PF05532 CsbD-like NG828_20280 PF00491 Arginase family NG828_20285 PF05860 haemagglutination activity domain NG828_20290 PF08479 POTRA domain, ShlB-type NG828_20290 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB NG828_20305 PF03309 Type III pantothenate kinase NG828_20310 PF03099 Biotin/lipoate A/B protein ligase family NG828_20310 PF02237 Biotin protein ligase C terminal domain NG828_20310 PF08279 HTH domain NG828_20320 PF06167 Glucose-regulated metallo-peptidase M90 NG828_20335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG828_20340 PF00072 Response regulator receiver domain NG828_20340 PF00486 Transcriptional regulatory protein, C terminal NG828_20350 PF01207 Dihydrouridine synthase (Dus) NG828_20390 PF09931 Uncharacterized conserved protein (DUF2163) NG828_20390 PF09356 Phage conserved hypothetical protein BR0599 NG828_20460 PF00574 Clp protease NG828_20660 PF08267 Cobalamin-independent synthase, N-terminal domain NG828_20660 PF01717 Cobalamin-independent synthase, Catalytic domain NG828_20670 PF00551 Formyl transferase NG828_20680 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NG828_20680 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NG828_20685 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NG828_20690 PF02146 Sir2 family NG828_20700 PF04151 Bacterial pre-peptidase C-terminal domain NG828_20700 PF00082 Subtilase family NG828_20705 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NG828_20710 PF07690 Major Facilitator Superfamily NG828_20715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NG828_20715 PF03466 LysR substrate binding domain NG828_20730 PF00268 Ribonucleotide reductase, small chain NG828_20735 PF03477 ATP cone domain NG828_20735 PF02867 Ribonucleotide reductase, barrel domain NG828_20735 PF00317 Ribonucleotide reductase, all-alpha domain NG828_20745 PF00486 Transcriptional regulatory protein, C terminal NG828_20745 PF00072 Response regulator receiver domain NG828_20750 PF00672 HAMP domain NG828_20750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG828_20750 PF00512 His Kinase A (phospho-acceptor) domain NG828_20760 PF02146 Sir2 family NG828_20765 PF02566 OsmC-like protein NG828_20770 PF01047 MarR family NG828_20780 PF03969 AFG1-like ATPase NG828_20795 PF02492 CobW/HypB/UreG, nucleotide-binding domain NG828_20795 PF07683 Cobalamin synthesis protein cobW C-terminal domain NG828_20820 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NG828_20820 PF02770 Acyl-CoA dehydrogenase, middle domain NG828_20820 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NG828_20825 PF01039 Carboxyl transferase domain NG828_20830 PF00289 Biotin carboxylase, N-terminal domain NG828_20830 PF00364 Biotin-requiring enzyme NG828_20830 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NG828_20830 PF02785 Biotin carboxylase C-terminal domain NG828_20865 PF00583 Acetyltransferase (GNAT) family NG828_20865 PF13380 CoA binding domain NG828_20865 PF13607 Succinyl-CoA ligase like flavodoxin domain NG828_20870 PF00999 Sodium/hydrogen exchanger family NG828_20870 PF02254 TrkA-N domain NG828_20875 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain NG828_20875 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain NG828_20880 PF00723 Glycosyl hydrolases family 15 NG828_20885 PF00072 Response regulator receiver domain NG828_20885 PF00486 Transcriptional regulatory protein, C terminal NG828_20890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG828_20890 PF00512 His Kinase A (phospho-acceptor) domain NG828_20895 PF13018 Extended Signal Peptide of Type V secretion system NG828_20895 PF03895 YadA-like membrane anchor domain NG828_20895 PF05662 Coiled stalk of trimeric autotransporter adhesin NG828_20895 PF05658 Head domain of trimeric autotransporter adhesin NG828_20900 PF00082 Subtilase family NG828_20900 PF04151 Bacterial pre-peptidase C-terminal domain NG828_20910 PF05166 YcgL domain NG828_20915 PF02801 Beta-ketoacyl synthase, C-terminal domain NG828_20915 PF00109 Beta-ketoacyl synthase, N-terminal domain NG828_20925 PF00535 Glycosyl transferase family 2 NG828_20935 PF07519 Tannase and feruloyl esterase NG828_20965 PF07977 FabA-like domain NG828_20980 PF00550 Phosphopantetheine attachment site NG828_20985 PF04820 Tryptophan halogenase NG828_21015 PF02322 Cytochrome bd terminal oxidase subunit II NG828_21020 PF01654 Cytochrome bd terminal oxidase subunit I NG828_21040 PF01218 Coproporphyrinogen III oxidase NG828_21050 PF01612 3'-5' exonuclease NG828_21050 PF00476 DNA polymerase family A NG828_21050 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NG828_21050 PF01367 5'-3' exonuclease, C-terminal SAM fold NG828_21060 PF00582 Universal stress protein family NG828_21065 PF12464 Maltose acetyltransferase NG828_21065 PF14602 Hexapeptide repeat of succinyl-transferase NG828_21080 PF03372 Endonuclease/Exonuclease/phosphatase family NG828_21085 PF13091 PLD-like domain NG828_21090 PF03706 Lysylphosphatidylglycerol synthase TM region NG828_21110 PF00580 UvrD/REP helicase N-terminal domain NG828_21110 PF13361 UvrD-like helicase C-terminal domain NG828_21115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NG828_21115 PF03466 LysR substrate binding domain NG828_21120 PF07690 Major Facilitator Superfamily NG828_21130 PF13396 Phospholipase_D-nuclease N-terminal NG828_21130 PF13091 PLD-like domain NG828_21135 PF00471 Ribosomal protein L33 NG828_21140 PF00830 Ribosomal L28 family NG828_21150 PF02321 Outer membrane efflux protein NG828_21155 PF00529 HlyD membrane-fusion protein of T1SS NG828_21155 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NG828_21160 PF00873 AcrB/AcrD/AcrF family NG828_21180 PF00535 Glycosyl transferase family 2 NG828_21185 PF01370 NAD dependent epimerase/dehydratase family NG828_21200 PF17762 HTH domain found in ParB protein NG828_21200 PF02195 ParB-like nuclease domain NG828_21205 PF13614 AAA domain NG828_21210 PF02527 rRNA small subunit methyltransferase G NG828_21215 PF01648 4'-phosphopantetheinyl transferase superfamily NG828_21220 PF04226 Transglycosylase associated protein NG828_21240 PF09312 SurA N-terminal domain NG828_21240 PF00639 PPIC-type PPIASE domain NG828_21250 PF00171 Aldehyde dehydrogenase family NG828_21255 PF13419 Haloacid dehalogenase-like hydrolase NG828_21260 PF00474 Sodium:solute symporter family NG828_21275 PF13193 AMP-binding enzyme C-terminal domain NG828_21275 PF00501 AMP-binding enzyme NG828_21275 PF16177 Acetyl-coenzyme A synthetase N-terminus NG828_21280 PF00196 Bacterial regulatory proteins, luxR family NG828_21280 PF00072 Response regulator receiver domain NG828_21285 PF02659 Putative manganese efflux pump NG828_21295 PF00593 TonB dependent receptor NG828_21295 PF07715 TonB-dependent Receptor Plug Domain NG828_21300 PF13181 Tetratricopeptide repeat NG828_21305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NG828_21305 PF00512 His Kinase A (phospho-acceptor) domain NG828_21305 PF01627 Hpt domain NG828_21305 PF00072 Response regulator receiver domain NG828_21305 PF00672 HAMP domain NG828_21310 PF01434 Peptidase family M41 NG828_21310 PF17862 AAA+ lid domain NG828_21310 PF00004 ATPase family associated with various cellular activities (AAA) NG828_21320 PF02245 Methylpurine-DNA glycosylase (MPG) NG828_21325 PF10459 Peptidase S46 NG828_21350 PF04357 TamB, inner membrane protein subunit of TAM complex NG828_21355 PF07244 Surface antigen variable number repeat NG828_21355 PF17243 POTRA domain TamA domain 1 NG828_21355 PF01103 Surface antigen NG828_21370 PF04337 Protein of unknown function, DUF480 NG828_21420 PF05860 haemagglutination activity domain NG828_21420 PF13332 Hemagglutinin repeat NG828_21420 PF04829 Pre-toxin domain with VENN motif NG828_21435 PF05860 haemagglutination activity domain NG828_21435 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain NG828_21435 PF13018 Extended Signal Peptide of Type V secretion system NG828_21435 PF05594 Haemagluttinin repeat NG828_21435 PF13332 Hemagglutinin repeat NG828_21450 PF05594 Haemagluttinin repeat NG828_21450 PF13332 Hemagglutinin repeat NG828_21450 PF05860 haemagglutination activity domain NG828_21450 PF15526 Novel toxin 21 NG828_21450 PF15526 Novel toxin 21 NG828_21450 PF04829 Pre-toxin domain with VENN motif NG828_21450 PF05860 haemagglutination activity domain NG828_21450 PF13332 Hemagglutinin repeat NG828_21450 PF05594 Haemagluttinin repeat NG828_21450 PF04829 Pre-toxin domain with VENN motif NG828_21450 PF05860 haemagglutination activity domain NG828_21450 PF15526 Novel toxin 21 NG828_21450 PF04829 Pre-toxin domain with VENN motif NG828_21450 PF13332 Hemagglutinin repeat NG828_21450 PF05594 Haemagluttinin repeat NG828_21455 PF17287 POTRA domain NG828_21455 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB NG828_21455 PF08479 POTRA domain, ShlB-type NG828_21465 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) NG828_21470 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NG828_21475 PF04820 Tryptophan halogenase NG828_21485 PF00356 Bacterial regulatory proteins, lacI family NG828_21500 PF01553 Acyltransferase NG828_21550 PF04244 Deoxyribodipyrimidine photo-lyase-related protein NG828_21575 PF01171 PP-loop family NG828_21580 PF04381 Putative exonuclease, RdgC NG828_21590 PF00672 HAMP domain NG828_21590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NG828_21590 PF02203 Tar ligand binding domain homologue NG828_21595 PF12146 Serine aminopeptidase, S33 NG828_21600 PF00762 Ferrochelatase NG828_21610 PF02416 mttA/Hcf106 family NG828_21615 PF02416 mttA/Hcf106 family NG828_21620 PF00902 Sec-independent protein translocase protein (TatC) NG828_21630 PF00117 Glutamine amidotransferase class-I NG828_21630 PF00958 GMP synthase C terminal domain NG828_21630 PF02540 NAD synthase NG828_21670 PF00437 Type II/IV secretion system protein NG828_21670 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NG828_21675 PF02091 Glycyl-tRNA synthetase alpha subunit NG828_21685 PF05746 DALR anticodon binding domain NG828_21685 PF02092 Glycyl-tRNA synthetase beta subunit NG828_21690 PF00580 UvrD/REP helicase N-terminal domain NG828_21690 PF13361 UvrD-like helicase C-terminal domain NG828_21695 PF00265 Thymidine kinase NG828_21705 PF04349 Periplasmic glucan biosynthesis protein, MdoG NG828_21710 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NG828_21710 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NG828_21710 PF06827 Zinc finger found in FPG and IleRS NG828_21735 PF00005 ABC transporter NG828_21740 PF01638 HxlR-like helix-turn-helix NG828_21755 PF01926 50S ribosome-binding GTPase NG828_21755 PF12631 MnmE helical domain NG828_21755 PF10396 GTP-binding protein TrmE N-terminus NG828_21760 PF03422 Carbohydrate binding module (family 6) NG828_21760 PF00457 Glycosyl hydrolases family 11 NG828_21760 PF01522 Polysaccharide deacetylase NG828_21765 PF02096 60Kd inner membrane protein NG828_21765 PF14849 YidC periplasmic domain NG828_21770 PF00825 Ribonuclease P NG828_21775 PF00468 Ribosomal protein L34