locus-tag class description NUG21_00005 PF00308 Bacterial dnaA protein NUG21_00005 PF08299 Bacterial dnaA protein helix-turn-helix NUG21_00005 PF11638 DnaA N-terminal domain NUG21_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain NUG21_00010 PF02767 DNA polymerase III beta subunit, central domain NUG21_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain NUG21_00015 PF02463 RecF/RecN/SMC N terminal domain NUG21_00020 PF01751 Toprim domain NUG21_00020 PF18053 DNA gyrase B subunit insert domain NUG21_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUG21_00020 PF00204 DNA gyrase B NUG21_00020 PF00986 DNA gyrase B subunit, carboxyl terminus NUG21_00025 PF02517 CPBP intramembrane metalloprotease NUG21_00030 PF01435 Peptidase family M48 NUG21_00040 PF03544 Gram-negative bacterial TonB protein C-terminal NUG21_00045 PF01618 MotA/TolQ/ExbB proton channel family NUG21_00050 PF02472 Biopolymer transport protein ExbD/TolR NUG21_00055 PF02472 Biopolymer transport protein ExbD/TolR NUG21_00060 PF02472 Biopolymer transport protein ExbD/TolR NUG21_00065 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ NUG21_00075 PF13396 Phospholipase_D-nuclease N-terminal NUG21_00075 PF13091 PLD-like domain NUG21_00080 PF04055 Radical SAM superfamily NUG21_00090 PF03358 NADPH-dependent FMN reductase NUG21_00110 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain NUG21_00120 PF01494 FAD binding domain NUG21_00125 PF00155 Aminotransferase class I and II NUG21_00130 PF07715 TonB-dependent Receptor Plug Domain NUG21_00130 PF00593 TonB dependent receptor NUG21_00140 PF00158 Sigma-54 interaction domain NUG21_00140 PF02954 Bacterial regulatory protein, Fis family NUG21_00140 PF01590 GAF domain NUG21_00145 PF00171 Aldehyde dehydrogenase family NUG21_00150 PF08240 Alcohol dehydrogenase GroES-like domain NUG21_00150 PF00107 Zinc-binding dehydrogenase NUG21_00170 PF02735 Ku70/Ku80 beta-barrel domain NUG21_00175 PF01070 FMN-dependent dehydrogenase NUG21_00180 PF00392 Bacterial regulatory proteins, gntR family NUG21_00180 PF07729 FCD domain NUG21_00190 PF07730 Histidine kinase NUG21_00195 PF00072 Response regulator receiver domain NUG21_00195 PF00196 Bacterial regulatory proteins, luxR family NUG21_00200 PF07055 Enoyl reductase FAD binding domain NUG21_00200 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase NUG21_00200 PF12241 Trans-2-enoyl-CoA reductase catalytic region NUG21_00290 PF07715 TonB-dependent Receptor Plug Domain NUG21_00290 PF00593 TonB dependent receptor NUG21_00295 PF07715 TonB-dependent Receptor Plug Domain NUG21_00320 PF00135 Carboxylesterase family NUG21_00325 PF13472 GDSL-like Lipase/Acylhydrolase family NUG21_00325 PF07859 alpha/beta hydrolase fold NUG21_00335 PF03480 Bacterial extracellular solute-binding protein, family 7 NUG21_00345 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component NUG21_00350 PF00356 Bacterial regulatory proteins, lacI family NUG21_00360 PF04962 KduI/IolB family NUG21_00380 PF03783 Curli production assembly/transport component CsgG NUG21_00390 PF05643 Putative bacterial lipoprotein (DUF799) NUG21_00395 PF00351 Biopterin-dependent aromatic amino acid hydroxylase NUG21_00400 PF01037 Lrp/AsnC ligand binding domain NUG21_00430 PF09077 Mu B transposition protein, C terminal NUG21_00430 PF13401 AAA domain NUG21_00495 PF08765 Mor transcription activator family NUG21_00505 PF01551 Peptidase family M23 NUG21_00505 PF01464 Transglycosylase SLT domain NUG21_00505 PF10145 Phage-related minor tail protein NUG21_00540 PF03237 Terminase-like family NUG21_00545 PF06074 Protein of unknown function (DUF935) NUG21_00570 PF10124 Mu-like prophage major head subunit gpT NUG21_00650 PF00593 TonB dependent receptor NUG21_00650 PF07660 Secretin and TonB N terminus short domain NUG21_00650 PF07715 TonB-dependent Receptor Plug Domain NUG21_00655 PF01734 Patatin-like phospholipase NUG21_00665 PF01569 PAP2 superfamily NUG21_00675 PF03741 Integral membrane protein TerC family NUG21_00680 PF17785 PUA-like domain NUG21_00680 PF10672 S-adenosylmethionine-dependent methyltransferase NUG21_00695 PF02595 Glycerate kinase family NUG21_00710 PF13520 Amino acid permease NUG21_00715 PF00196 Bacterial regulatory proteins, luxR family NUG21_00715 PF00072 Response regulator receiver domain NUG21_00720 PF08447 PAS fold NUG21_00720 PF00989 PAS fold NUG21_00720 PF00512 His Kinase A (phospho-acceptor) domain NUG21_00720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUG21_00720 PF13426 PAS domain NUG21_00720 PF13493 Domain of unknown function (DUF4118) NUG21_00725 PF02308 MgtC family NUG21_00735 PF02646 RmuC family NUG21_00740 PF00255 Glutathione peroxidase NUG21_00750 PF04333 MlaA lipoprotein NUG21_00765 PF02470 MlaD protein NUG21_00770 PF02405 Permease MlaE NUG21_00775 PF00005 ABC transporter NUG21_00810 PF17946 RecC C-terminal domain NUG21_00815 PF12705 PD-(D/E)XK nuclease superfamily NUG21_00815 PF00580 UvrD/REP helicase N-terminal domain NUG21_00815 PF13361 UvrD-like helicase C-terminal domain NUG21_00820 PF13538 UvrD-like helicase C-terminal domain NUG21_00830 PF00440 Bacterial regulatory proteins, tetR family NUG21_00880 PF02203 Tar ligand binding domain homologue NUG21_00880 PF00672 HAMP domain NUG21_00880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUG21_00890 PF00083 Sugar (and other) transporter NUG21_00895 PF01227 GTP cyclohydrolase I NUG21_00920 PF02810 SEC-C motif NUG21_00925 PF13406 Transglycosylase SLT domain NUG21_00930 PF07690 Major Facilitator Superfamily NUG21_00935 PF01126 Heme oxygenase NUG21_00940 PF01590 GAF domain NUG21_00940 PF08446 PAS fold NUG21_00940 PF13426 PAS domain NUG21_00940 PF00360 Phytochrome region NUG21_00945 PF03594 Benzoate membrane transport protein NUG21_00985 PF02142 MGS-like domain NUG21_00990 PF00150 Cellulase (glycosyl hydrolase family 5) NUG21_00995 PF00150 Cellulase (glycosyl hydrolase family 5) NUG21_01000 PF00150 Cellulase (glycosyl hydrolase family 5) NUG21_01005 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NUG21_01005 PF07992 Pyridine nucleotide-disulphide oxidoreductase NUG21_01010 PF00310 Glutamine amidotransferases class-II NUG21_01010 PF04898 Glutamate synthase central domain NUG21_01010 PF01645 Conserved region in glutamate synthase NUG21_01010 PF01493 GXGXG motif NUG21_01040 PF01068 ATP dependent DNA ligase domain NUG21_01040 PF13298 DNA polymerase Ligase (LigD) NUG21_01040 PF04679 ATP dependent DNA ligase C terminal region NUG21_01080 PF00270 DEAD/DEAH box helicase NUG21_01080 PF09369 Domain of unknown function (DUF1998) NUG21_01080 PF00271 Helicase conserved C-terminal domain NUG21_01085 PF03006 Haemolysin-III related NUG21_01115 PF00083 Sugar (and other) transporter NUG21_01125 PF07859 alpha/beta hydrolase fold NUG21_01160 PF00004 ATPase family associated with various cellular activities (AAA) NUG21_01160 PF17862 AAA+ lid domain NUG21_01160 PF01434 Peptidase family M41 NUG21_01165 PF13614 AAA domain NUG21_01180 PF13091 PLD-like domain NUG21_01185 PF03061 Thioesterase superfamily NUG21_01210 PF02673 Bacitracin resistance protein BacA NUG21_01215 PF00120 Glutamine synthetase, catalytic domain NUG21_01215 PF03951 Glutamine synthetase, beta-Grasp domain NUG21_01220 PF00543 Nitrogen regulatory protein P-II NUG21_01225 PF00909 Ammonium Transporter Family NUG21_01230 PF00989 PAS fold NUG21_01230 PF00512 His Kinase A (phospho-acceptor) domain NUG21_01230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUG21_01235 PF00158 Sigma-54 interaction domain NUG21_01235 PF00072 Response regulator receiver domain NUG21_01235 PF02954 Bacterial regulatory protein, Fis family NUG21_01240 PF00080 Copper/zinc superoxide dismutase (SODC) NUG21_01245 PF00080 Copper/zinc superoxide dismutase (SODC) NUG21_01255 PF00108 Thiolase, N-terminal domain NUG21_01255 PF02803 Thiolase, C-terminal domain NUG21_01280 PF00583 Acetyltransferase (GNAT) family NUG21_01280 PF09500 Putative thioesterase (yiiD_Cterm) NUG21_01295 PF02556 Preprotein translocase subunit SecB NUG21_01300 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NUG21_01300 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NUG21_01310 PF00440 Bacterial regulatory proteins, tetR family NUG21_01330 PF00588 SpoU rRNA Methylase family NUG21_01340 PF05193 Peptidase M16 inactive domain NUG21_01340 PF00675 Insulinase (Peptidase family M16) NUG21_01350 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NUG21_01350 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NUG21_01355 PF02661 Fic/DOC family NUG21_01355 PF13784 Fic/DOC family N-terminal NUG21_01360 PF00561 alpha/beta hydrolase fold NUG21_01370 PF03692 Putative zinc- or iron-chelating domain NUG21_01375 PF00501 AMP-binding enzyme NUG21_01380 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family NUG21_01400 PF03109 ABC1 family NUG21_01405 PF01596 O-methyltransferase NUG21_01410 PF00849 RNA pseudouridylate synthase NUG21_01420 PF00472 RF-1 domain NUG21_01430 PF07715 TonB-dependent Receptor Plug Domain NUG21_01430 PF00593 TonB dependent receptor NUG21_01440 PF08281 Sigma-70, region 4 NUG21_01440 PF04542 Sigma-70 region 2 NUG21_01450 PF01112 Asparaginase NUG21_01455 PF01432 Peptidase family M3 NUG21_01465 PF10502 Signal peptidase, peptidase S26 NUG21_01475 PF12706 Beta-lactamase superfamily domain NUG21_01480 PF00440 Bacterial regulatory proteins, tetR family NUG21_01495 PF12833 Helix-turn-helix domain NUG21_01505 PF03466 LysR substrate binding domain NUG21_01505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUG21_01510 PF03466 LysR substrate binding domain NUG21_01510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUG21_01515 PF01274 Malate synthase NUG21_01520 PF00463 Isocitrate lyase family NUG21_01525 PF08448 PAS fold NUG21_01525 PF00990 Diguanylate cyclase, GGDEF domain NUG21_01550 PF00916 Sulfate permease family NUG21_01550 PF01740 STAS domain NUG21_01580 PF00378 Enoyl-CoA hydratase/isomerase NUG21_01585 PF00501 AMP-binding enzyme NUG21_01595 PF07690 Major Facilitator Superfamily NUG21_01615 PF00171 Aldehyde dehydrogenase family NUG21_01625 PF01494 FAD binding domain NUG21_01640 PF00970 Oxidoreductase FAD-binding domain NUG21_01640 PF00111 2Fe-2S iron-sulfur cluster binding domain NUG21_01650 PF00355 Rieske [2Fe-2S] domain NUG21_01655 PF01144 Coenzyme A transferase NUG21_01660 PF01144 Coenzyme A transferase NUG21_01665 PF02803 Thiolase, C-terminal domain NUG21_01665 PF00108 Thiolase, N-terminal domain NUG21_01670 PF00775 Dioxygenase NUG21_01670 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal NUG21_01675 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal NUG21_01675 PF00775 Dioxygenase NUG21_01680 PF00206 Lyase NUG21_01680 PF10397 Adenylosuccinate lyase C-terminus NUG21_01685 PF12146 Serine aminopeptidase, S33 NUG21_01690 PF02627 Carboxymuconolactone decarboxylase family NUG21_01695 PF09339 IclR helix-turn-helix domain NUG21_01695 PF01614 Bacterial transcriptional regulator NUG21_01700 PF00107 Zinc-binding dehydrogenase NUG21_01700 PF16884 N-terminal domain of oxidoreductase NUG21_01705 PF00248 Aldo/keto reductase family NUG21_01715 PF00849 RNA pseudouridylate synthase NUG21_01725 PF08482 ATP-dependent helicase C-terminal NUG21_01725 PF00271 Helicase conserved C-terminal domain NUG21_01725 PF04408 Helicase associated domain (HA2) NUG21_01725 PF00270 DEAD/DEAH box helicase NUG21_01730 PF01026 TatD related DNase NUG21_01745 PF05736 OprF membrane domain NUG21_01745 PF00691 OmpA family NUG21_01775 PF00437 Type II/IV secretion system protein NUG21_01780 PF03958 Bacterial type II/III secretion system short domain NUG21_01780 PF11741 AMIN domain NUG21_01780 PF07660 Secretin and TonB N terminus short domain NUG21_01780 PF00263 Bacterial type II and III secretion system protein NUG21_01820 PF01061 ABC-2 type transporter NUG21_01825 PF00005 ABC transporter NUG21_01830 PF00970 Oxidoreductase FAD-binding domain NUG21_01830 PF00111 2Fe-2S iron-sulfur cluster binding domain NUG21_01830 PF00175 Oxidoreductase NAD-binding domain NUG21_01840 PF01381 Helix-turn-helix NUG21_01845 PF00561 alpha/beta hydrolase fold NUG21_01850 PF00005 ABC transporter NUG21_01870 PF03350 Uncharacterized protein family, UPF0114 NUG21_01875 PF00043 Glutathione S-transferase, C-terminal domain NUG21_01875 PF02798 Glutathione S-transferase, N-terminal domain NUG21_01880 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region NUG21_01880 PF00326 Prolyl oligopeptidase family NUG21_01915 PF00490 Delta-aminolevulinic acid dehydratase NUG21_01925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUG21_01925 PF03466 LysR substrate binding domain NUG21_01935 PF00258 Flavodoxin NUG21_01935 PF00667 FAD binding domain NUG21_01935 PF00175 Oxidoreductase NAD-binding domain NUG21_01940 PF07676 WD40-like Beta Propeller Repeat NUG21_01940 PF04052 TolB amino-terminal domain NUG21_01945 PF08501 Shikimate dehydrogenase substrate binding domain NUG21_01945 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NUG21_01945 PF01488 Shikimate / quinate 5-dehydrogenase NUG21_01960 PF06733 DEAD_2 NUG21_01960 PF13307 Helicase C-terminal domain NUG21_01965 PF00529 HlyD membrane-fusion protein of T1SS NUG21_01965 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NUG21_01970 PF00664 ABC transporter transmembrane region NUG21_01970 PF00005 ABC transporter NUG21_01970 PF03412 Peptidase C39 family NUG21_01995 PF00199 Catalase NUG21_01995 PF06628 Catalase-related immune-responsive NUG21_02020 PF07690 Major Facilitator Superfamily NUG21_02025 PF05506 Domain of unknown function (DUF756) NUG21_02025 PF04185 Phosphoesterase family NUG21_02035 PF01594 AI-2E family transporter NUG21_02050 PF10905 Protein of unknown function (DUF2695) NUG21_02090 PF00920 Dehydratase family NUG21_02105 PF03738 Glutathionylspermidine synthase preATP-grasp NUG21_02125 PF07726 ATPase family associated with various cellular activities (AAA) NUG21_02125 PF17863 AAA lid domain NUG21_02160 PF01037 Lrp/AsnC ligand binding domain NUG21_02165 PF00132 Bacterial transferase hexapeptide (six repeats) NUG21_02170 PF13649 Methyltransferase domain NUG21_02175 PF05048 Periplasmic copper-binding protein (NosD) NUG21_02180 PF04966 Carbohydrate-selective porin, OprB family NUG21_02185 PF01487 Type I 3-dehydroquinase NUG21_02190 PF07690 Major Facilitator Superfamily NUG21_02195 PF01011 PQQ enzyme repeat NUG21_02200 PF00529 HlyD membrane-fusion protein of T1SS NUG21_02200 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NUG21_02205 PF00873 AcrB/AcrD/AcrF family NUG21_02210 PF02321 Outer membrane efflux protein NUG21_02220 PF07859 alpha/beta hydrolase fold NUG21_02225 PF13932 GidA associated domain NUG21_02225 PF01134 Glucose inhibited division protein A NUG21_02235 PF00291 Pyridoxal-phosphate dependent enzyme NUG21_02250 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase NUG21_02255 PF13649 Methyltransferase domain NUG21_02265 PF12697 Alpha/beta hydrolase family NUG21_02275 PF00155 Aminotransferase class I and II NUG21_02280 PF06968 Biotin and Thiamin Synthesis associated domain NUG21_02280 PF04055 Radical SAM superfamily NUG21_02290 PF01040 UbiA prenyltransferase family NUG21_02305 PF01078 Magnesium chelatase, subunit ChlI NUG21_02305 PF13335 Magnesium chelatase, subunit ChlI C-terminal NUG21_02310 PF04380 Membrane fusogenic activity NUG21_02315 PF00543 Nitrogen regulatory protein P-II NUG21_02320 PF17284 Spermidine synthase tetramerisation domain NUG21_02325 PF17810 Arginine decarboxylase helical bundle domain NUG21_02325 PF17944 Arginine decarboxylase C-terminal helical extension NUG21_02325 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NUG21_02340 PF03466 LysR substrate binding domain NUG21_02340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUG21_02375 PF00106 short chain dehydrogenase NUG21_02385 PF00750 tRNA synthetases class I (R) NUG21_02385 PF05746 DALR anticodon binding domain NUG21_02385 PF03485 Arginyl tRNA synthetase N terminal domain NUG21_02390 PF04002 RadC-like JAB domain NUG21_02395 PF02441 Flavoprotein NUG21_02395 PF04127 DNA / pantothenate metabolism flavoprotein NUG21_02400 PF00692 dUTPase NUG21_02405 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NUG21_02405 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NUG21_02405 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NUG21_02405 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NUG21_02415 PF00156 Phosphoribosyl transferase domain NUG21_02420 PF03372 Endonuclease/Exonuclease/phosphatase family NUG21_02425 PF07690 Major Facilitator Superfamily NUG21_02435 PF03702 Anhydro-N-acetylmuramic acid kinase NUG21_02440 PF04225 Opacity-associated protein A LysM-like domain NUG21_02440 PF01551 Peptidase family M23 NUG21_02445 PF00579 tRNA synthetases class I (W and Y) NUG21_02475 PF00107 Zinc-binding dehydrogenase NUG21_02475 PF08240 Alcohol dehydrogenase GroES-like domain NUG21_02480 PF04389 Peptidase family M28 NUG21_02490 PF01551 Peptidase family M23 NUG21_02495 PF13180 PDZ domain NUG21_02495 PF03572 Peptidase family S41 NUG21_02500 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NUG21_02500 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NUG21_02515 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) NUG21_02520 PF01619 Proline dehydrogenase NUG21_02520 PF14850 DNA-binding domain of Proline dehydrogenase NUG21_02520 PF18327 Proline utilization A proline dehydrogenase N-terminal domain NUG21_02520 PF00171 Aldehyde dehydrogenase family NUG21_02530 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NUG21_02530 PF02790 Cytochrome C oxidase subunit II, transmembrane domain NUG21_02535 PF00115 Cytochrome C and Quinol oxidase polypeptide I NUG21_02545 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 NUG21_02550 PF00510 Cytochrome c oxidase subunit III NUG21_02575 PF01040 UbiA prenyltransferase family NUG21_02580 PF00672 HAMP domain NUG21_02580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUG21_02580 PF02203 Tar ligand binding domain homologue NUG21_02590 PF13593 SBF-like CPA transporter family (DUF4137) NUG21_02600 PF10410 DnaB-helicase binding domain of primase NUG21_02600 PF08278 DNA primase DnaG DnaB-binding NUG21_02600 PF08275 DNA primase catalytic core, N-terminal domain NUG21_02600 PF01807 CHC2 zinc finger NUG21_02605 PF03631 Virulence factor BrkB NUG21_02610 PF09424 Yqey-like protein NUG21_02615 PF01165 Ribosomal protein S21 NUG21_02620 PF00814 Glycoprotease family NUG21_02625 PF02152 Dihydroneopterin aldolase NUG21_02630 PF00924 Mechanosensitive ion channel NUG21_02635 PF14403 Circularly permuted ATP-grasp type 2 NUG21_02645 PF14310 Fibronectin type III-like domain NUG21_02645 PF00933 Glycosyl hydrolase family 3 N terminal domain NUG21_02645 PF01915 Glycosyl hydrolase family 3 C-terminal domain NUG21_02650 PF07995 Glucose / Sorbosone dehydrogenase NUG21_02670 PF13520 Amino acid permease NUG21_02695 PF00356 Bacterial regulatory proteins, lacI family NUG21_02715 PF04820 Tryptophan halogenase NUG21_02720 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NUG21_02720 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NUG21_02730 PF00933 Glycosyl hydrolase family 3 N terminal domain NUG21_02730 PF01915 Glycosyl hydrolase family 3 C-terminal domain NUG21_02730 PF14310 Fibronectin type III-like domain NUG21_02735 PF00356 Bacterial regulatory proteins, lacI family NUG21_02740 PF07477 Glycosyl hydrolase family 67 C-terminus NUG21_02740 PF07488 Glycosyl hydrolase family 67 middle domain NUG21_02740 PF03648 Glycosyl hydrolase family 67 N-terminus NUG21_02750 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain NUG21_02750 PF04616 Glycosyl hydrolases family 43 NUG21_02755 PF07691 PA14 domain NUG21_02755 PF14310 Fibronectin type III-like domain NUG21_02755 PF00933 Glycosyl hydrolase family 3 N terminal domain NUG21_02755 PF01915 Glycosyl hydrolase family 3 C-terminal domain NUG21_02765 PF04616 Glycosyl hydrolases family 43 NUG21_02770 PF13378 Enolase C-terminal domain-like NUG21_02770 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NUG21_02780 PF07715 TonB-dependent Receptor Plug Domain NUG21_02780 PF00593 TonB dependent receptor NUG21_02785 PF01510 N-acetylmuramoyl-L-alanine amidase NUG21_02810 PF01471 Putative peptidoglycan binding domain NUG21_02810 PF04717 Type VI secretion system, phage-baseplate injector NUG21_02815 PF01427 D-ala-D-ala dipeptidase NUG21_02845 PF07063 Domain of unknown function (DUF1338) NUG21_02850 PF00883 Cytosol aminopeptidase family, catalytic domain NUG21_02850 PF02789 Cytosol aminopeptidase family, N-terminal domain NUG21_02855 PF13419 Haloacid dehalogenase-like hydrolase NUG21_02860 PF01594 AI-2E family transporter NUG21_02890 PF13180 PDZ domain NUG21_02890 PF00595 PDZ domain NUG21_02895 PF00772 DnaB-like helicase N terminal domain NUG21_02895 PF03796 DnaB-like helicase C terminal domain NUG21_02895 PF14528 LAGLIDADG-like domain NUG21_02895 PF00772 DnaB-like helicase N terminal domain NUG21_02895 PF03796 DnaB-like helicase C terminal domain NUG21_02895 PF14528 LAGLIDADG-like domain NUG21_02920 PF00563 EAL domain NUG21_02920 PF03707 Bacterial signalling protein N terminal repeat NUG21_02920 PF00990 Diguanylate cyclase, GGDEF domain NUG21_02960 PF03372 Endonuclease/Exonuclease/phosphatase family NUG21_02965 PF12072 Domain of unknown function (DUF3552) NUG21_02965 PF00013 KH domain NUG21_02965 PF01966 HD domain NUG21_02970 PF07308 Protein of unknown function (DUF1456) NUG21_02975 PF08220 DeoR-like helix-turn-helix domain NUG21_02975 PF00455 DeoR C terminal sensor domain NUG21_02985 PF16901 C-terminal domain of alpha-glycerophosphate oxidase NUG21_02985 PF01266 FAD dependent oxidoreductase NUG21_02990 PF00230 Major intrinsic protein NUG21_02995 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NUG21_02995 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NUG21_03005 PF13419 Haloacid dehalogenase-like hydrolase NUG21_03010 PF00248 Aldo/keto reductase family NUG21_03025 PF01557 Fumarylacetoacetate (FAA) hydrolase family NUG21_03030 PF13378 Enolase C-terminal domain-like NUG21_03030 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NUG21_03035 PF05336 L-rhamnose mutarotase NUG21_03040 PF07690 Major Facilitator Superfamily NUG21_03045 PF09339 IclR helix-turn-helix domain NUG21_03045 PF01614 Bacterial transcriptional regulator NUG21_03070 PF16957 Malonate decarboxylase, alpha subunit, transporter NUG21_03075 PF06857 Malonate decarboxylase delta subunit (MdcD) NUG21_03080 PF01039 Carboxyl transferase domain NUG21_03090 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG NUG21_03095 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase NUG21_03110 PF00392 Bacterial regulatory proteins, gntR family NUG21_03110 PF07729 FCD domain NUG21_03115 PF02678 Pirin NUG21_03115 PF05726 Pirin C-terminal cupin domain NUG21_03135 PF00328 Histidine phosphatase superfamily (branch 2) NUG21_03140 PF08240 Alcohol dehydrogenase GroES-like domain NUG21_03140 PF00107 Zinc-binding dehydrogenase NUG21_03145 PF00924 Mechanosensitive ion channel NUG21_03145 PF12795 Mechanosensitive ion channel porin domain NUG21_03145 PF12794 Mechanosensitive ion channel inner membrane domain 1 NUG21_03150 PF03109 ABC1 family NUG21_03165 PF02733 Dak1 domain NUG21_03165 PF02734 DAK2 domain NUG21_03170 PF05661 Protein of unknown function (DUF808) NUG21_03175 PF00990 Diguanylate cyclase, GGDEF domain NUG21_03185 PF02308 MgtC family NUG21_03190 PF00294 pfkB family carbohydrate kinase NUG21_03195 PF13460 NAD(P)H-binding NUG21_03210 PF00271 Helicase conserved C-terminal domain NUG21_03210 PF00270 DEAD/DEAH box helicase NUG21_03220 PF04151 Bacterial pre-peptidase C-terminal domain NUG21_03220 PF01447 Thermolysin metallopeptidase, catalytic domain NUG21_03220 PF03413 Peptidase propeptide and YPEB domain NUG21_03220 PF07504 Fungalysin/Thermolysin Propeptide Motif NUG21_03220 PF02868 Thermolysin metallopeptidase, alpha-helical domain NUG21_03225 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NUG21_03225 PF00364 Biotin-requiring enzyme NUG21_03225 PF02817 e3 binding domain NUG21_03235 PF02779 Transketolase, pyrimidine binding domain NUG21_03235 PF02780 Transketolase, C-terminal domain NUG21_03240 PF00676 Dehydrogenase E1 component NUG21_03255 PF03301 Tryptophan 2,3-dioxygenase NUG21_03260 PF00854 POT family NUG21_03275 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NUG21_03280 PF04480 Protein of unknown function (DUF559) NUG21_03285 PF04209 homogentisate 1,2-dioxygenase NUG21_03300 PF00873 AcrB/AcrD/AcrF family NUG21_03305 PF00873 AcrB/AcrD/AcrF family NUG21_03310 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NUG21_03315 PF07687 Peptidase dimerisation domain NUG21_03315 PF01546 Peptidase family M20/M25/M40 NUG21_03320 PF14489 QueF-like protein NUG21_03320 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term NUG21_03325 PF04972 BON domain NUG21_03325 PF01476 LysM domain NUG21_03335 PF03971 Monomeric isocitrate dehydrogenase NUG21_03340 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) NUG21_03355 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NUG21_03355 PF07497 Rho termination factor, RNA-binding domain NUG21_03355 PF07498 Rho termination factor, N-terminal domain NUG21_03360 PF00085 Thioredoxin NUG21_03365 PF00270 DEAD/DEAH box helicase NUG21_03365 PF00271 Helicase conserved C-terminal domain NUG21_03365 PF12300 ATP-dependent RNA helicase RhlB NUG21_03370 PF00005 ABC transporter NUG21_03375 PF18075 FtsX extracellular domain NUG21_03380 PF01339 CheB methylesterase NUG21_03380 PF00072 Response regulator receiver domain NUG21_03385 PF03167 Uracil DNA glycosylase superfamily NUG21_03390 PF00140 Sigma-70 factor, region 1.2 NUG21_03390 PF04542 Sigma-70 region 2 NUG21_03390 PF04545 Sigma-70, region 4 NUG21_03395 PF03458 UPF0126 domain NUG21_03400 PF07992 Pyridine nucleotide-disulphide oxidoreductase NUG21_03410 PF00270 DEAD/DEAH box helicase NUG21_03410 PF00271 Helicase conserved C-terminal domain NUG21_03410 PF18319 PriA DNA helicase Cys-rich region (CRR) domain NUG21_03410 PF18074 Primosomal protein N C-terminal domain NUG21_03410 PF17764 3′ DNA-binding domain (3′BD) NUG21_03420 PF01554 MatE NUG21_03425 PF01343 Peptidase family S49 NUG21_03450 PF01300 Telomere recombination NUG21_03455 PF01131 DNA topoisomerase NUG21_03455 PF01751 Toprim domain NUG21_03455 PF13368 Topoisomerase C-terminal repeat NUG21_03460 PF06271 RDD family NUG21_03465 PF07963 Prokaryotic N-terminal methylation motif NUG21_03465 PF00114 Pilin (bacterial filament) NUG21_03470 PF04361 Protein of unknown function (DUF494) NUG21_03475 PF02481 DNA recombination-mediator protein A NUG21_03475 PF17782 DprA winged helix domain NUG21_03480 PF01476 LysM domain NUG21_03485 PF01327 Polypeptide deformylase NUG21_03490 PF02911 Formyl transferase, C-terminal domain NUG21_03490 PF00551 Formyl transferase NUG21_03495 PF01029 NusB family NUG21_03495 PF01189 16S rRNA methyltransferase RsmB/F NUG21_03500 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase NUG21_03515 PF00535 Glycosyl transferase family 2 NUG21_03535 PF00925 GTP cyclohydrolase II NUG21_03550 PF02580 D-Tyr-tRNA(Tyr) deacylase NUG21_03555 PF03979 Sigma-70 factor, region 1.1 NUG21_03555 PF04545 Sigma-70, region 4 NUG21_03555 PF04546 Sigma-70, non-essential region NUG21_03555 PF04542 Sigma-70 region 2 NUG21_03555 PF00140 Sigma-70 factor, region 1.2 NUG21_03555 PF04539 Sigma-70 region 3 NUG21_03565 PF07690 Major Facilitator Superfamily NUG21_03570 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NUG21_03570 PF00356 Bacterial regulatory proteins, lacI family NUG21_03575 PF07971 Glycosyl hydrolase family 92 NUG21_03575 PF17678 Glycosyl hydrolase family 92 N-terminal domain NUG21_03580 PF00128 Alpha amylase, catalytic domain NUG21_03580 PF11896 Domain of unknown function (DUF3416) NUG21_03585 PF00128 Alpha amylase, catalytic domain NUG21_03585 PF16657 Maltogenic Amylase, C-terminal domain NUG21_03590 PF00128 Alpha amylase, catalytic domain NUG21_03590 PF02806 Alpha amylase, C-terminal all-beta domain NUG21_03590 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NUG21_03695 PF02899 Phage integrase, N-terminal SAM-like domain NUG21_03695 PF00589 Phage integrase family NUG21_03740 PF00356 Bacterial regulatory proteins, lacI family NUG21_03750 PF07995 Glucose / Sorbosone dehydrogenase NUG21_03765 PF00557 Metallopeptidase family M24 NUG21_03770 PF00873 AcrB/AcrD/AcrF family NUG21_03775 PF00529 HlyD membrane-fusion protein of T1SS NUG21_03775 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NUG21_03780 PF00072 Response regulator receiver domain NUG21_03780 PF00486 Transcriptional regulatory protein, C terminal NUG21_03785 PF00672 HAMP domain NUG21_03785 PF00512 His Kinase A (phospho-acceptor) domain NUG21_03785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUG21_03790 PF01292 Prokaryotic cytochrome b561 NUG21_03795 PF00440 Bacterial regulatory proteins, tetR family NUG21_03810 PF12706 Beta-lactamase superfamily domain NUG21_03815 PF00667 FAD binding domain NUG21_03815 PF00258 Flavodoxin NUG21_03815 PF00175 Oxidoreductase NAD-binding domain NUG21_03815 PF00067 Cytochrome P450 NUG21_03830 PF00701 Dihydrodipicolinate synthetase family NUG21_03835 PF07690 Major Facilitator Superfamily NUG21_03860 PF00672 HAMP domain NUG21_03860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUG21_03860 PF02203 Tar ligand binding domain homologue NUG21_03870 PF05067 Manganese containing catalase NUG21_03875 PF05974 Domain of unknown function (DUF892) NUG21_03880 PF05974 Domain of unknown function (DUF892) NUG21_03890 PF00440 Bacterial regulatory proteins, tetR family NUG21_03895 PF00111 2Fe-2S iron-sulfur cluster binding domain NUG21_03895 PF00970 Oxidoreductase FAD-binding domain NUG21_03895 PF00175 Oxidoreductase NAD-binding domain NUG21_03900 PF00487 Fatty acid desaturase NUG21_03920 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NUG21_03920 PF00205 Thiamine pyrophosphate enzyme, central domain NUG21_03920 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NUG21_03925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUG21_03925 PF00512 His Kinase A (phospho-acceptor) domain NUG21_03925 PF00989 PAS fold NUG21_03930 PF02954 Bacterial regulatory protein, Fis family NUG21_03930 PF00072 Response regulator receiver domain NUG21_03930 PF00158 Sigma-54 interaction domain NUG21_03945 PF07690 Major Facilitator Superfamily NUG21_03950 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NUG21_03950 PF10414 Sirohaem synthase dimerisation region NUG21_03950 PF14824 Sirohaem biosynthesis protein central NUG21_03960 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NUG21_03960 PF00128 Alpha amylase, catalytic domain NUG21_03970 PF00128 Alpha amylase, catalytic domain NUG21_03975 PF02446 4-alpha-glucanotransferase NUG21_03980 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NUG21_03980 PF11941 Domain of unknown function (DUF3459) NUG21_03980 PF00128 Alpha amylase, catalytic domain NUG21_03985 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NUG21_03985 PF02806 Alpha amylase, C-terminal all-beta domain NUG21_03985 PF00128 Alpha amylase, catalytic domain NUG21_03990 PF00534 Glycosyl transferases group 1 NUG21_03990 PF08323 Starch synthase catalytic domain NUG21_04000 PF00158 Sigma-54 interaction domain NUG21_04000 PF00072 Response regulator receiver domain NUG21_04000 PF02954 Bacterial regulatory protein, Fis family NUG21_04005 PF08448 PAS fold NUG21_04005 PF13188 PAS domain NUG21_04005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUG21_04005 PF00072 Response regulator receiver domain NUG21_04005 PF00512 His Kinase A (phospho-acceptor) domain NUG21_04010 PF00857 Isochorismatase family NUG21_04015 PF13632 Glycosyl transferase family group 2 NUG21_04025 PF04397 LytTr DNA-binding domain NUG21_04025 PF00072 Response regulator receiver domain NUG21_04030 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain NUG21_04030 PF03900 Porphobilinogen deaminase, C-terminal domain NUG21_04045 PF01638 HxlR-like helix-turn-helix NUG21_04060 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NUG21_04060 PF00326 Prolyl oligopeptidase family NUG21_04070 PF00155 Aminotransferase class I and II NUG21_04075 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NUG21_04075 PF00326 Prolyl oligopeptidase family NUG21_04080 PF04304 Protein of unknown function (DUF454) NUG21_04090 PF01678 Diaminopimelate epimerase NUG21_04100 PF00589 Phage integrase family NUG21_04100 PF02899 Phage integrase, N-terminal SAM-like domain NUG21_04110 PF00227 Proteasome subunit NUG21_04115 PF07724 AAA domain (Cdc48 subfamily) NUG21_04115 PF10431 C-terminal, D2-small domain, of ClpB protein NUG21_04115 PF00004 ATPase family associated with various cellular activities (AAA) NUG21_04135 PF01209 ubiE/COQ5 methyltransferase family NUG21_04140 PF01433 Peptidase family M1 domain NUG21_04140 PF11838 ERAP1-like C-terminal domain NUG21_04165 PF13360 PQQ-like domain NUG21_04170 PF00497 Bacterial extracellular solute-binding proteins, family 3 NUG21_04175 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP NUG21_04175 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NUG21_04185 PF00107 Zinc-binding dehydrogenase NUG21_04185 PF08240 Alcohol dehydrogenase GroES-like domain NUG21_04195 PF00158 Sigma-54 interaction domain NUG21_04195 PF01590 GAF domain NUG21_04195 PF02954 Bacterial regulatory protein, Fis family NUG21_04200 PF00294 pfkB family carbohydrate kinase NUG21_04210 PF04085 rod shape-determining protein MreC NUG21_04220 PF00905 Penicillin binding protein transpeptidase domain NUG21_04220 PF03717 Penicillin-binding Protein dimerisation domain NUG21_04225 PF01098 Cell cycle protein NUG21_04235 PF00295 Glycosyl hydrolases family 28 NUG21_04240 PF13406 Transglycosylase SLT domain NUG21_04245 PF05036 Sporulation related domain NUG21_04245 PF03330 Lytic transglycolase NUG21_04250 PF00768 D-alanyl-D-alanine carboxypeptidase NUG21_04250 PF07943 Penicillin-binding protein 5, C-terminal domain NUG21_04260 PF04359 Protein of unknown function (DUF493) NUG21_04265 PF03099 Biotin/lipoate A/B protein ligase family NUG21_04270 PF04055 Radical SAM superfamily NUG21_04270 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family NUG21_04275 PF17804 Tail specific protease N-terminal domain NUG21_04275 PF00595 PDZ domain NUG21_04275 PF11818 C-terminal domain of tail specific protease (DUF3340) NUG21_04275 PF03572 Peptidase family S41 NUG21_04285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUG21_04285 PF03466 LysR substrate binding domain NUG21_04295 PF07745 Glycosyl hydrolase family 53 NUG21_04300 PF01467 Cytidylyltransferase-like NUG21_04300 PF00293 NUDIX domain NUG21_04330 PF01370 NAD dependent epimerase/dehydratase family NUG21_04330 PF08338 Domain of unknown function (DUF1731) NUG21_04340 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain NUG21_04340 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NUG21_04345 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NUG21_04345 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NUG21_04350 PF04972 BON domain NUG21_04360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUG21_04360 PF07689 KaiB domain NUG21_04360 PF00512 His Kinase A (phospho-acceptor) domain NUG21_04365 PF00072 Response regulator receiver domain NUG21_04370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUG21_04370 PF00512 His Kinase A (phospho-acceptor) domain NUG21_04380 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NUG21_04400 PF03330 Lytic transglycolase NUG21_04420 PF02837 Glycosyl hydrolases family 2, sugar binding domain NUG21_04420 PF16355 Domain of unknown function (DUF4982) NUG21_04420 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 NUG21_04420 PF00703 Glycosyl hydrolases family 2 NUG21_04420 PF02836 Glycosyl hydrolases family 2, TIM barrel domain NUG21_04435 PF07702 UTRA domain NUG21_04435 PF00392 Bacterial regulatory proteins, gntR family NUG21_04440 PF07690 Major Facilitator Superfamily NUG21_04445 PF00356 Bacterial regulatory proteins, lacI family NUG21_04450 PF01380 SIS domain NUG21_04455 PF01979 Amidohydrolase family NUG21_04470 PF12627 Probable RNA and SrmB- binding site of polymerase A NUG21_04470 PF01743 Poly A polymerase head domain NUG21_04470 PF01966 HD domain NUG21_04475 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain NUG21_04475 PF01464 Transglycosylase SLT domain NUG21_04480 PF00593 TonB dependent receptor NUG21_04480 PF07715 TonB-dependent Receptor Plug Domain NUG21_04495 PF01323 DSBA-like thioredoxin domain NUG21_04500 PF00034 Cytochrome c NUG21_04505 PF01926 50S ribosome-binding GTPase NUG21_04515 PF12833 Helix-turn-helix domain NUG21_04535 PF04107 Glutamate-cysteine ligase family 2(GCS2) NUG21_04560 PF01906 Putative heavy-metal-binding NUG21_04565 PF00672 HAMP domain NUG21_04565 PF00512 His Kinase A (phospho-acceptor) domain NUG21_04565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUG21_04570 PF00486 Transcriptional regulatory protein, C terminal NUG21_04570 PF00072 Response regulator receiver domain NUG21_04575 PF02583 Metal-sensitive transcriptional repressor NUG21_04580 PF00107 Zinc-binding dehydrogenase NUG21_04580 PF08240 Alcohol dehydrogenase GroES-like domain NUG21_04585 PF04828 Glutathione-dependent formaldehyde-activating enzyme NUG21_04590 PF00756 Putative esterase NUG21_04600 PF00155 Aminotransferase class I and II NUG21_04600 PF00392 Bacterial regulatory proteins, gntR family NUG21_04605 PF02567 Phenazine biosynthesis-like protein NUG21_04610 PF00892 EamA-like transporter family NUG21_04620 PF02645 Uncharacterised protein, DegV family COG1307 NUG21_04625 PF01323 DSBA-like thioredoxin domain NUG21_04640 PF01979 Amidohydrolase family NUG21_04640 PF00449 Urease alpha-subunit, N-terminal domain NUG21_04645 PF01979 Amidohydrolase family NUG21_04655 PF00462 Glutaredoxin NUG21_04660 PF01522 Polysaccharide deacetylase NUG21_04680 PF00155 Aminotransferase class I and II NUG21_04685 PF03193 RsgA GTPase NUG21_04705 PF00128 Alpha amylase, catalytic domain NUG21_04720 PF00356 Bacterial regulatory proteins, lacI family NUG21_04725 PF00106 short chain dehydrogenase NUG21_04730 PF03600 Citrate transporter NUG21_04740 PF00072 Response regulator receiver domain NUG21_04740 PF00486 Transcriptional regulatory protein, C terminal NUG21_04745 PF08521 Two-component sensor kinase N-terminal NUG21_04745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUG21_04745 PF00512 His Kinase A (phospho-acceptor) domain NUG21_04755 PF07494 Two component regulator propeller NUG21_04755 PF12833 Helix-turn-helix domain NUG21_04755 PF00072 Response regulator receiver domain NUG21_04755 PF00512 His Kinase A (phospho-acceptor) domain NUG21_04755 PF12833 Helix-turn-helix domain NUG21_04755 PF07495 Y_Y_Y domain NUG21_04755 PF07495 Y_Y_Y domain NUG21_04755 PF00072 Response regulator receiver domain NUG21_04755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUG21_04755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUG21_04755 PF00512 His Kinase A (phospho-acceptor) domain NUG21_04755 PF07494 Two component regulator propeller NUG21_04760 PF00196 Bacterial regulatory proteins, luxR family NUG21_04760 PF00072 Response regulator receiver domain NUG21_04770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUG21_04770 PF00512 His Kinase A (phospho-acceptor) domain NUG21_04780 PF00375 Sodium:dicarboxylate symporter family NUG21_04785 PF01515 Phosphate acetyl/butaryl transferase NUG21_04785 PF00390 Malic enzyme, N-terminal domain NUG21_04785 PF03949 Malic enzyme, NAD binding domain NUG21_04815 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) NUG21_04820 PF02321 Outer membrane efflux protein NUG21_04835 PF00072 Response regulator receiver domain NUG21_04835 PF00990 Diguanylate cyclase, GGDEF domain NUG21_04840 PF00180 Isocitrate/isopropylmalate dehydrogenase NUG21_04845 PF00694 Aconitase C-terminal domain NUG21_04855 PF00330 Aconitase family (aconitate hydratase) NUG21_04860 PF08502 LeuA allosteric (dimerisation) domain NUG21_04860 PF00682 HMGL-like NUG21_04865 PF00291 Pyridoxal-phosphate dependent enzyme NUG21_04875 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NUG21_04875 PF00205 Thiamine pyrophosphate enzyme, central domain NUG21_04875 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NUG21_04880 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain NUG21_04880 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain NUG21_04890 PF02028 BCCT, betaine/carnitine/choline family transporter NUG21_04895 PF02203 Tar ligand binding domain homologue NUG21_04895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUG21_04895 PF00672 HAMP domain NUG21_04900 PF13667 ThiC-associated domain NUG21_04900 PF01964 Radical SAM ThiC family NUG21_04920 PF07676 WD40-like Beta Propeller Repeat NUG21_04920 PF00326 Prolyl oligopeptidase family NUG21_04930 PF07715 TonB-dependent Receptor Plug Domain NUG21_04930 PF00593 TonB dependent receptor NUG21_04940 PF00719 Inorganic pyrophosphatase NUG21_04950 PF03030 Inorganic H+ pyrophosphatase NUG21_04965 PF00365 Phosphofructokinase NUG21_04975 PF02875 Mur ligase family, glutamate ligase domain NUG21_04975 PF08245 Mur ligase middle domain NUG21_04975 PF01225 Mur ligase family, catalytic domain NUG21_04990 PF09335 SNARE associated Golgi protein NUG21_04995 PF02447 GntP family permease NUG21_05015 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NUG21_05020 PF00202 Aminotransferase class-III NUG21_05030 PF00127 Copper binding proteins, plastocyanin/azurin family NUG21_05035 PF00202 Aminotransferase class-III NUG21_05040 PF02581 Thiamine monophosphate synthase NUG21_05045 PF00301 Rubredoxin NUG21_05050 PF13369 Transglutaminase-like superfamily NUG21_05060 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) NUG21_05070 PF01812 5-formyltetrahydrofolate cyclo-ligase family NUG21_05085 PF05164 Cell division protein ZapA NUG21_05095 PF00563 EAL domain NUG21_05095 PF00990 Diguanylate cyclase, GGDEF domain NUG21_05095 PF03707 Bacterial signalling protein N terminal repeat NUG21_05100 PF03695 Uncharacterised protein family (UPF0149) NUG21_05105 PF05195 Aminopeptidase P, N-terminal domain NUG21_05105 PF00557 Metallopeptidase family M24 NUG21_05115 PF00557 Metallopeptidase family M24 NUG21_05130 PF04055 Radical SAM superfamily NUG21_05130 PF06969 HemN C-terminal domain NUG21_05135 PF01725 Ham1 family NUG21_05140 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NUG21_05145 PF01138 3' exoribonuclease family, domain 1 NUG21_05145 PF03725 3' exoribonuclease family, domain 2 NUG21_05150 PF03755 YicC-like family, N-terminal region NUG21_05150 PF08340 Domain of unknown function (DUF1732) NUG21_05155 PF00625 Guanylate kinase NUG21_05160 PF01192 RNA polymerase Rpb6 NUG21_05165 PF02824 TGS domain NUG21_05165 PF04607 Region found in RelA / SpoT proteins NUG21_05165 PF13291 ACT domain NUG21_05170 PF01042 Endoribonuclease L-PSP NUG21_05175 PF00270 DEAD/DEAH box helicase NUG21_05175 PF17191 RecG wedge domain NUG21_05175 PF00271 Helicase conserved C-terminal domain NUG21_05180 PF01156 Inosine-uridine preferring nucleoside hydrolase NUG21_05185 PF01197 Ribosomal protein L31 NUG21_05190 PF00285 Citrate synthase, C-terminal domain NUG21_05200 PF00905 Penicillin binding protein transpeptidase domain NUG21_05200 PF00912 Transglycosylase NUG21_05200 PF17092 Penicillin-binding protein OB-like domain NUG21_05205 PF11104 Type IV pilus assembly protein PilM; NUG21_05215 PF04350 Pilus assembly protein, PilO NUG21_05220 PF04351 Pilus assembly protein, PilP NUG21_05225 PF07660 Secretin and TonB N terminus short domain NUG21_05225 PF11741 AMIN domain NUG21_05225 PF00263 Bacterial type II and III secretion system protein NUG21_05225 PF03958 Bacterial type II/III secretion system short domain NUG21_05230 PF17863 AAA lid domain NUG21_05230 PF07726 ATPase family associated with various cellular activities (AAA) NUG21_05235 PF01882 Protein of unknown function DUF58 NUG21_05245 PF13519 von Willebrand factor type A domain NUG21_05260 PF00375 Sodium:dicarboxylate symporter family NUG21_05265 PF02779 Transketolase, pyrimidine binding domain NUG21_05265 PF02780 Transketolase, C-terminal domain NUG21_05265 PF00456 Transketolase, thiamine diphosphate binding domain NUG21_05305 PF03965 Penicillinase repressor NUG21_05325 PF00005 ABC transporter NUG21_05325 PF03459 TOBE domain NUG21_05330 PF00528 Binding-protein-dependent transport system inner membrane component NUG21_05340 PF04273 Putative phosphatase (DUF442) NUG21_05340 PF00753 Metallo-beta-lactamase superfamily NUG21_05345 PF01022 Bacterial regulatory protein, arsR family NUG21_05360 PF00873 AcrB/AcrD/AcrF family NUG21_05370 PF00085 Thioredoxin NUG21_05380 PF03922 OmpW family NUG21_05385 PF03922 OmpW family NUG21_05390 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NUG21_05390 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NUG21_05415 PF00162 Phosphoglycerate kinase NUG21_05420 PF13419 Haloacid dehalogenase-like hydrolase NUG21_05425 PF02887 Pyruvate kinase, alpha/beta domain NUG21_05425 PF00224 Pyruvate kinase, barrel domain NUG21_05430 PF01966 HD domain NUG21_05435 PF00274 Fructose-bisphosphate aldolase class-I NUG21_05440 PF00072 Response regulator receiver domain NUG21_05440 PF00486 Transcriptional regulatory protein, C terminal NUG21_05445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUG21_05445 PF00512 His Kinase A (phospho-acceptor) domain NUG21_05455 PF08479 POTRA domain, ShlB-type NUG21_05455 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB NUG21_05460 PF01661 Macro domain NUG21_05475 PF01156 Inosine-uridine preferring nucleoside hydrolase NUG21_05485 PF00291 Pyridoxal-phosphate dependent enzyme NUG21_05490 PF10414 Sirohaem synthase dimerisation region NUG21_05490 PF14824 Sirohaem biosynthesis protein central NUG21_05490 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NUG21_05495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUG21_05495 PF03466 LysR substrate binding domain NUG21_05505 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB NUG21_05505 PF08448 PAS fold NUG21_05505 PF00512 His Kinase A (phospho-acceptor) domain NUG21_05505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUG21_05505 PF00672 HAMP domain NUG21_05510 PF03960 ArsC family NUG21_05530 PF01507 Phosphoadenosine phosphosulfate reductase family NUG21_05535 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NUG21_05535 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NUG21_05540 PF00667 FAD binding domain NUG21_05540 PF00175 Oxidoreductase NAD-binding domain NUG21_05540 PF00258 Flavodoxin NUG21_05545 PF01507 Phosphoadenosine phosphosulfate reductase family NUG21_05550 PF00009 Elongation factor Tu GTP binding domain NUG21_05555 PF11838 ERAP1-like C-terminal domain NUG21_05555 PF01433 Peptidase family M1 domain NUG21_05560 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NUG21_05565 PF00873 AcrB/AcrD/AcrF family NUG21_05570 PF13439 Glycosyltransferase Family 4 NUG21_05570 PF00534 Glycosyl transferases group 1 NUG21_05590 PF00588 SpoU rRNA Methylase family NUG21_05590 PF08032 RNA 2'-O ribose methyltransferase substrate binding NUG21_05605 PF00356 Bacterial regulatory proteins, lacI family NUG21_05610 PF04389 Peptidase family M28 NUG21_05610 PF02225 PA domain NUG21_05615 PF01741 Large-conductance mechanosensitive channel, MscL NUG21_05620 PF01557 Fumarylacetoacetate (FAA) hydrolase family NUG21_05635 PF03600 Citrate transporter NUG21_05635 PF02080 TrkA-C domain NUG21_05640 PF02390 Putative methyltransferase NUG21_05645 PF05690 Thiazole biosynthesis protein ThiG NUG21_05665 PF03466 LysR substrate binding domain NUG21_05665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUG21_05670 PF02525 Flavodoxin-like fold NUG21_05680 PF04185 Phosphoesterase family NUG21_05680 PF05506 Domain of unknown function (DUF756) NUG21_05685 PF07660 Secretin and TonB N terminus short domain NUG21_05685 PF07715 TonB-dependent Receptor Plug Domain NUG21_05685 PF00593 TonB dependent receptor NUG21_05690 PF08443 RimK-like ATP-grasp domain NUG21_05690 PF18030 RimK PreATP-grasp domain NUG21_05695 PF00486 Transcriptional regulatory protein, C terminal NUG21_05695 PF00072 Response regulator receiver domain NUG21_05700 PF00989 PAS fold NUG21_05700 PF11808 Phosphate regulon sensor protein PhoR NUG21_05700 PF00512 His Kinase A (phospho-acceptor) domain NUG21_05700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUG21_05705 PF01121 Dephospho-CoA kinase NUG21_05710 PF01478 Type IV leader peptidase family NUG21_05710 PF06750 Bacterial Peptidase A24 N-terminal domain NUG21_05715 PF00482 Type II secretion system (T2SS), protein F NUG21_05720 PF07963 Prokaryotic N-terminal methylation motif NUG21_05720 PF00114 Pilin (bacterial filament) NUG21_05725 PF07963 Prokaryotic N-terminal methylation motif NUG21_05725 PF00114 Pilin (bacterial filament) NUG21_05730 PF00437 Type II/IV secretion system protein NUG21_05730 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NUG21_05735 PF02954 Bacterial regulatory protein, Fis family NUG21_05735 PF00158 Sigma-54 interaction domain NUG21_05735 PF00072 Response regulator receiver domain NUG21_05740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUG21_05740 PF00512 His Kinase A (phospho-acceptor) domain NUG21_05745 PF00549 CoA-ligase NUG21_05745 PF08442 ATP-grasp domain NUG21_05750 PF00549 CoA-ligase NUG21_05750 PF02629 CoA binding domain NUG21_05755 PF01011 PQQ enzyme repeat NUG21_05760 PF02540 NAD synthase NUG21_05760 PF00795 Carbon-nitrogen hydrolase NUG21_05765 PF10017 Histidine-specific methyltransferase, SAM-dependent NUG21_05770 PF03781 Sulfatase-modifying factor enzyme 1 NUG21_05770 PF12867 DinB superfamily NUG21_05780 PF00528 Binding-protein-dependent transport system inner membrane component NUG21_05785 PF00005 ABC transporter NUG21_05795 PF13525 Outer membrane lipoprotein NUG21_05800 PF00849 RNA pseudouridylate synthase NUG21_05805 PF02578 Multi-copper polyphenol oxidoreductase laccase NUG21_05820 PF00672 HAMP domain NUG21_05820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUG21_05820 PF02203 Tar ligand binding domain homologue NUG21_05825 PF01011 PQQ enzyme repeat NUG21_05830 PF00982 Glycosyltransferase family 20 NUG21_05835 PF00723 Glycosyl hydrolases family 15 NUG21_05840 PF02358 Trehalose-phosphatase NUG21_05845 PF00593 TonB dependent receptor NUG21_05845 PF07715 TonB-dependent Receptor Plug Domain NUG21_05855 PF00583 Acetyltransferase (GNAT) family NUG21_05875 PF07724 AAA domain (Cdc48 subfamily) NUG21_05875 PF17871 AAA lid domain NUG21_05875 PF02861 Clp amino terminal domain, pathogenicity island component NUG21_05875 PF10431 C-terminal, D2-small domain, of ClpB protein NUG21_05875 PF00004 ATPase family associated with various cellular activities (AAA) NUG21_05885 PF01053 Cys/Met metabolism PLP-dependent enzyme NUG21_05890 PF03466 LysR substrate binding domain NUG21_05890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUG21_05895 PF04632 Fusaric acid resistance protein family NUG21_05905 PF01638 HxlR-like helix-turn-helix NUG21_05915 PF07690 Major Facilitator Superfamily NUG21_05925 PF07769 psiF repeat NUG21_05930 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NUG21_05930 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NUG21_05935 PF04183 IucA / IucC family NUG21_05935 PF06276 Ferric iron reductase FhuF-like transporter NUG21_05940 PF07690 Major Facilitator Superfamily NUG21_05945 PF06276 Ferric iron reductase FhuF-like transporter NUG21_05945 PF04183 IucA / IucC family NUG21_05955 PF00593 TonB dependent receptor NUG21_05955 PF07660 Secretin and TonB N terminus short domain NUG21_05955 PF07715 TonB-dependent Receptor Plug Domain NUG21_05960 PF03328 HpcH/HpaI aldolase/citrate lyase family NUG21_05965 PF00999 Sodium/hydrogen exchanger family NUG21_05965 PF02254 TrkA-N domain NUG21_05980 PF07715 TonB-dependent Receptor Plug Domain NUG21_05980 PF00593 TonB dependent receptor NUG21_05995 PF00005 ABC transporter NUG21_05995 PF12848 ABC transporter NUG21_06010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUG21_06010 PF03466 LysR substrate binding domain NUG21_06020 PF07859 alpha/beta hydrolase fold NUG21_06020 PF13472 GDSL-like Lipase/Acylhydrolase family NUG21_06025 PF05506 Domain of unknown function (DUF756) NUG21_06025 PF04185 Phosphoesterase family NUG21_06050 PF00152 tRNA synthetases class II (D, K and N) NUG21_06050 PF02938 GAD domain NUG21_06050 PF01336 OB-fold nucleic acid binding domain NUG21_06080 PF01709 Transcriptional regulator NUG21_06085 PF02075 Crossover junction endodeoxyribonuclease RuvC NUG21_06090 PF07499 RuvA, C-terminal domain NUG21_06090 PF01330 RuvA N terminal domain NUG21_06095 PF02705 K+ potassium transporter NUG21_06100 PF17864 RuvB AAA lid domain NUG21_06100 PF05491 RuvB C-terminal winged helix domain NUG21_06100 PF05496 Holliday junction DNA helicase RuvB P-loop domain NUG21_06105 PF03061 Thioesterase superfamily NUG21_06110 PF01618 MotA/TolQ/ExbB proton channel family NUG21_06115 PF02472 Biopolymer transport protein ExbD/TolR NUG21_06125 PF07676 WD40-like Beta Propeller Repeat NUG21_06125 PF04052 TolB amino-terminal domain NUG21_06130 PF00691 OmpA family NUG21_06140 PF04055 Radical SAM superfamily NUG21_06145 PF06508 Queuosine biosynthesis protein QueC NUG21_06160 PF01810 LysE type translocator NUG21_06165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUG21_06165 PF03466 LysR substrate binding domain NUG21_06180 PF09382 RQC domain NUG21_06180 PF00570 HRDC domain NUG21_06180 PF00271 Helicase conserved C-terminal domain NUG21_06180 PF16124 RecQ zinc-binding NUG21_06180 PF00270 DEAD/DEAH box helicase NUG21_06185 PF00210 Ferritin-like domain NUG21_06190 PF00271 Helicase conserved C-terminal domain NUG21_06190 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold NUG21_06190 PF11898 Domain of unknown function (DUF3418) NUG21_06190 PF00270 DEAD/DEAH box helicase NUG21_06190 PF04408 Helicase associated domain (HA2) NUG21_06195 PF00654 Voltage gated chloride channel NUG21_06205 PF04055 Radical SAM superfamily NUG21_06205 PF13186 Iron-sulfur cluster-binding domain NUG21_06210 PF05402 Coenzyme PQQ synthesis protein D (PqqD) NUG21_06215 PF03070 TENA/THI-4/PQQC family NUG21_06220 PF12706 Beta-lactamase superfamily domain NUG21_06225 PF13291 ACT domain NUG21_06225 PF04607 Region found in RelA / SpoT proteins NUG21_06225 PF02824 TGS domain NUG21_06235 PF00535 Glycosyl transferase family 2 NUG21_06240 PF00912 Transglycosylase NUG21_06240 PF14814 Bifunctional transglycosylase second domain NUG21_06240 PF00905 Penicillin binding protein transpeptidase domain NUG21_06250 PF13307 Helicase C-terminal domain NUG21_06250 PF04851 Type III restriction enzyme, res subunit NUG21_06255 PF00814 Glycoprotease family NUG21_06260 PF03747 ADP-ribosylglycohydrolase NUG21_06265 PF00593 TonB dependent receptor NUG21_06275 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain NUG21_06275 PF02951 Prokaryotic glutathione synthetase, N-terminal domain NUG21_06280 PF00072 Response regulator receiver domain NUG21_06285 PF00072 Response regulator receiver domain NUG21_06290 PF01584 CheW-like domain NUG21_06295 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term NUG21_06295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUG21_06300 PF01627 Hpt domain NUG21_06300 PF01584 CheW-like domain NUG21_06300 PF00072 Response regulator receiver domain NUG21_06300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUG21_06305 PF01339 CheB methylesterase NUG21_06305 PF00072 Response regulator receiver domain NUG21_06320 PF01112 Asparaginase NUG21_06325 PF03932 CutC family NUG21_06350 PF01638 HxlR-like helix-turn-helix NUG21_06355 PF08240 Alcohol dehydrogenase GroES-like domain NUG21_06355 PF00107 Zinc-binding dehydrogenase NUG21_06380 PF01301 Glycosyl hydrolases family 35 NUG21_06385 PF07971 Glycosyl hydrolase family 92 NUG21_06385 PF17678 Glycosyl hydrolase family 92 N-terminal domain NUG21_06395 PF11975 Family 4 glycosyl hydrolase C-terminal domain NUG21_06395 PF02056 Family 4 glycosyl hydrolase NUG21_06405 PF13520 Amino acid permease NUG21_06410 PF01301 Glycosyl hydrolases family 35 NUG21_06420 PF14310 Fibronectin type III-like domain NUG21_06420 PF00933 Glycosyl hydrolase family 3 N terminal domain NUG21_06420 PF07691 PA14 domain NUG21_06420 PF01915 Glycosyl hydrolase family 3 C-terminal domain NUG21_06430 PF00728 Glycosyl hydrolase family 20, catalytic domain NUG21_06430 PF02838 Glycosyl hydrolase family 20, domain 2 NUG21_06430 PF07691 PA14 domain NUG21_06435 PF00704 Glycosyl hydrolases family 18 NUG21_06435 PF01476 LysM domain NUG21_06450 PF02685 Glucokinase NUG21_06455 PF04452 RNA methyltransferase NUG21_06460 PF00202 Aminotransferase class-III NUG21_06465 PF00293 NUDIX domain NUG21_06470 PF00459 Inositol monophosphatase family NUG21_06475 PF03819 MazG nucleotide pyrophosphohydrolase domain NUG21_06480 PF02694 Uncharacterised BCR, YnfA/UPF0060 family NUG21_06490 PF16200 C-terminal region of band_7 NUG21_06490 PF01145 SPFH domain / Band 7 family NUG21_06500 PF01571 Aminomethyltransferase folate-binding domain NUG21_06500 PF08669 Glycine cleavage T-protein C-terminal barrel domain NUG21_06505 PF01597 Glycine cleavage H-protein NUG21_06520 PF05199 GMC oxidoreductase NUG21_06520 PF00732 GMC oxidoreductase NUG21_06540 PF02770 Acyl-CoA dehydrogenase, middle domain NUG21_06540 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NUG21_06540 PF09317 Domain of unknown function (DUF1974) NUG21_06540 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NUG21_06550 PF00440 Bacterial regulatory proteins, tetR family NUG21_06555 PF00593 TonB dependent receptor NUG21_06555 PF07715 TonB-dependent Receptor Plug Domain NUG21_06565 PF01430 Hsp33 protein NUG21_06570 PF00912 Transglycosylase NUG21_06575 PF00535 Glycosyl transferase family 2 NUG21_06580 PF00571 CBS domain NUG21_06590 PF03006 Haemolysin-III related NUG21_06595 PF16658 Class II release factor RF3, C-terminal domain NUG21_06595 PF00009 Elongation factor Tu GTP binding domain NUG21_06600 PF01551 Peptidase family M23 NUG21_06600 PF08525 Opacity-associated protein A N-terminal motif NUG21_06600 PF01476 LysM domain NUG21_06605 PF00561 alpha/beta hydrolase fold NUG21_06610 PF01053 Cys/Met metabolism PLP-dependent enzyme NUG21_06615 PF00696 Amino acid kinase family NUG21_06615 PF00742 Homoserine dehydrogenase NUG21_06615 PF03447 Homoserine dehydrogenase, NAD binding domain NUG21_06620 PF00704 Glycosyl hydrolases family 18 NUG21_06620 PF00553 Cellulose binding domain NUG21_06620 PF00041 Fibronectin type III domain NUG21_06630 PF00561 alpha/beta hydrolase fold NUG21_06630 PF08386 TAP-like protein NUG21_06635 PF00990 Diguanylate cyclase, GGDEF domain NUG21_06640 PF03313 Serine dehydratase alpha chain NUG21_06640 PF03315 Serine dehydratase beta chain NUG21_06650 PF00043 Glutathione S-transferase, C-terminal domain NUG21_06650 PF13417 Glutathione S-transferase, N-terminal domain NUG21_06660 PF01292 Prokaryotic cytochrome b561 NUG21_06665 PF04264 YceI-like domain NUG21_06670 PF00072 Response regulator receiver domain NUG21_06670 PF01627 Hpt domain NUG21_06670 PF17149 Periplasmic sensor domain found in signal transduction proteins NUG21_06670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUG21_06670 PF00512 His Kinase A (phospho-acceptor) domain NUG21_06670 PF00672 HAMP domain NUG21_06675 PF17149 Periplasmic sensor domain found in signal transduction proteins NUG21_06675 PF00672 HAMP domain NUG21_06675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUG21_06675 PF00512 His Kinase A (phospho-acceptor) domain NUG21_06675 PF01627 Hpt domain NUG21_06675 PF00072 Response regulator receiver domain NUG21_06680 PF07690 Major Facilitator Superfamily NUG21_06685 PF01208 Uroporphyrinogen decarboxylase (URO-D) NUG21_06695 PF12833 Helix-turn-helix domain NUG21_06710 PF13533 Biotin-lipoyl like NUG21_06715 PF00873 AcrB/AcrD/AcrF family NUG21_06720 PF02321 Outer membrane efflux protein NUG21_06725 PF07859 alpha/beta hydrolase fold NUG21_06735 PF01761 3-dehydroquinate synthase NUG21_06740 PF01202 Shikimate kinase NUG21_06745 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region NUG21_06745 PF01243 Pyridoxamine 5'-phosphate oxidase NUG21_06755 PF07690 Major Facilitator Superfamily NUG21_06760 PF00376 MerR family regulatory protein NUG21_06760 PF09278 MerR, DNA binding NUG21_06775 PF14748 Pyrroline-5-carboxylate reductase dimerisation NUG21_06775 PF03807 NADP oxidoreductase coenzyme F420-dependent NUG21_06785 PF01168 Alanine racemase, N-terminal domain NUG21_06790 PF00437 Type II/IV secretion system protein NUG21_06795 PF00437 Type II/IV secretion system protein NUG21_06805 PF17151 Periplasmic sensor domain NUG21_06805 PF00990 Diguanylate cyclase, GGDEF domain NUG21_06825 PF13673 Acetyltransferase (GNAT) domain NUG21_06825 PF13302 Acetyltransferase (GNAT) domain NUG21_06825 PF03352 Methyladenine glycosylase NUG21_06825 PF00117 Glutamine amidotransferase class-I NUG21_06825 PF00958 GMP synthase C terminal domain NUG21_06835 PF02622 Uncharacterized ACR, COG1678 NUG21_06840 PF03652 Holliday junction resolvase NUG21_06845 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NUG21_06845 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NUG21_06855 PF00544 Pectate lyase NUG21_06860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUG21_06860 PF00672 HAMP domain NUG21_06860 PF02203 Tar ligand binding domain homologue NUG21_06865 PF02203 Tar ligand binding domain homologue NUG21_06865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUG21_06865 PF00672 HAMP domain NUG21_06875 PF00324 Amino acid permease NUG21_06880 PF03600 Citrate transporter NUG21_06890 PF00756 Putative esterase NUG21_06895 PF00571 CBS domain NUG21_06895 PF01769 Divalent cation transporter NUG21_06895 PF03448 MgtE intracellular N domain NUG21_06900 PF05524 PEP-utilising enzyme, N-terminal NUG21_06900 PF00391 PEP-utilising enzyme, mobile domain NUG21_06900 PF02896 PEP-utilising enzyme, TIM barrel domain NUG21_06905 PF00381 PTS HPr component phosphorylation site NUG21_06915 PF03668 P-loop ATPase protein family NUG21_06920 PF07475 HPr Serine kinase C-terminal domain NUG21_06920 PF02603 HPr Serine kinase N terminus NUG21_06925 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NUG21_06930 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NUG21_06935 PF04963 Sigma-54 factor, core binding domain NUG21_06935 PF04552 Sigma-54, DNA binding domain NUG21_06935 PF00309 Sigma-54 factor, Activator interacting domain (AID) NUG21_06940 PF00005 ABC transporter NUG21_06960 PF01380 SIS domain NUG21_06960 PF00571 CBS domain NUG21_06970 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NUG21_06990 PF00551 Formyl transferase NUG21_06995 PF02769 AIR synthase related protein, C-terminal domain NUG21_06995 PF00586 AIR synthase related protein, N-terminal domain NUG21_07005 PF01594 AI-2E family transporter NUG21_07010 PF00308 Bacterial dnaA protein NUG21_07015 PF00483 Nucleotidyl transferase NUG21_07020 PF01636 Phosphotransferase enzyme family NUG21_07045 PF00486 Transcriptional regulatory protein, C terminal NUG21_07045 PF00072 Response regulator receiver domain NUG21_07050 PF02424 ApbE family NUG21_07055 PF18331 PKHD-type hydroxylase C-terminal domain NUG21_07055 PF13640 2OG-Fe(II) oxygenase superfamily NUG21_07060 PF07715 TonB-dependent Receptor Plug Domain NUG21_07060 PF00593 TonB dependent receptor NUG21_07080 PF02547 Queuosine biosynthesis protein NUG21_07115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUG21_07115 PF03466 LysR substrate binding domain NUG21_07155 PF03653 Uncharacterised protein family (UPF0093) NUG21_07160 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit NUG21_07170 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NUG21_07170 PF14579 Helix-hairpin-helix motif NUG21_07170 PF02811 PHP domain NUG21_07170 PF01336 OB-fold nucleic acid binding domain NUG21_07170 PF07733 Bacterial DNA polymerase III alpha NTPase domain NUG21_07175 PF01351 Ribonuclease HII NUG21_07180 PF02684 Lipid-A-disaccharide synthetase NUG21_07185 PF00132 Bacterial transferase hexapeptide (six repeats) NUG21_07185 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 NUG21_07190 PF07977 FabA-like domain NUG21_07195 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD NUG21_07195 PF00132 Bacterial transferase hexapeptide (six repeats) NUG21_07200 PF07244 Surface antigen variable number repeat NUG21_07200 PF01103 Surface antigen NUG21_07205 PF02163 Peptidase family M50 NUG21_07205 PF17820 PDZ domain NUG21_07210 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase NUG21_07210 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain NUG21_07210 PF13288 DXP reductoisomerase C-terminal domain NUG21_07220 PF01255 Putative undecaprenyl diphosphate synthase NUG21_07225 PF01765 Ribosome recycling factor NUG21_07230 PF00696 Amino acid kinase family NUG21_07235 PF00990 Diguanylate cyclase, GGDEF domain NUG21_07235 PF05230 MASE2 domain NUG21_07240 PF00889 Elongation factor TS NUG21_07245 PF00318 Ribosomal protein S2 NUG21_07285 PF00557 Metallopeptidase family M24 NUG21_07290 PF01966 HD domain NUG21_07290 PF01909 Nucleotidyltransferase domain NUG21_07290 PF08335 GlnD PII-uridylyltransferase NUG21_07295 PF00132 Bacterial transferase hexapeptide (six repeats) NUG21_07295 PF14602 Hexapeptide repeat of succinyl-transferase NUG21_07295 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal NUG21_07310 PF03960 ArsC family NUG21_07320 PF01546 Peptidase family M20/M25/M40 NUG21_07320 PF07687 Peptidase dimerisation domain NUG21_07325 PF13537 Glutamine amidotransferase domain NUG21_07325 PF00733 Asparagine synthase NUG21_07350 PF01804 Penicillin amidase NUG21_07355 PF00210 Ferritin-like domain NUG21_07375 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NUG21_07375 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NUG21_07385 PF00202 Aminotransferase class-III NUG21_07400 PF00171 Aldehyde dehydrogenase family NUG21_07420 PF00521 DNA gyrase/topoisomerase IV, subunit A NUG21_07420 PF03989 DNA gyrase C-terminal domain, beta-propeller NUG21_07435 PF02321 Outer membrane efflux protein NUG21_07440 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NUG21_07440 PF00529 HlyD membrane-fusion protein of T1SS NUG21_07445 PF07690 Major Facilitator Superfamily NUG21_07470 PF06903 VirK protein NUG21_07480 PF17876 Cold shock domain NUG21_07480 PF08461 Ribonuclease R winged-helix domain NUG21_07480 PF08206 Ribonuclease B OB domain NUG21_07480 PF00773 RNB domain NUG21_07480 PF00575 S1 RNA binding domain NUG21_07490 PF00588 SpoU rRNA Methylase family NUG21_07490 PF08032 RNA 2'-O ribose methyltransferase substrate binding NUG21_07495 PF00990 Diguanylate cyclase, GGDEF domain NUG21_07495 PF17158 Membrane-associated sensor, integral membrane domain NUG21_07505 PF00929 Exonuclease NUG21_07515 PF05114 Protein of unknown function (DUF692) NUG21_07525 PF01895 PhoU domain NUG21_07530 PF00005 ABC transporter NUG21_07535 PF00528 Binding-protein-dependent transport system inner membrane component NUG21_07540 PF00528 Binding-protein-dependent transport system inner membrane component NUG21_07545 PF12849 PBP superfamily domain NUG21_07550 PF12849 PBP superfamily domain NUG21_07565 PF00484 Carbonic anhydrase NUG21_07570 PF01740 STAS domain NUG21_07570 PF00916 Sulfate permease family NUG21_07575 PF00730 HhH-GPD superfamily base excision DNA repair protein NUG21_07575 PF00633 Helix-hairpin-helix motif NUG21_07575 PF10576 Iron-sulfur binding domain of endonuclease III NUG21_07585 PF00378 Enoyl-CoA hydratase/isomerase NUG21_07590 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NUG21_07590 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NUG21_07595 PF00293 NUDIX domain NUG21_07600 PF00581 Rhodanese-like domain NUG21_07630 PF00005 ABC transporter NUG21_07630 PF12848 ABC transporter NUG21_07635 PF00106 short chain dehydrogenase NUG21_07640 PF12833 Helix-turn-helix domain NUG21_07640 PF06719 AraC-type transcriptional regulator N-terminus NUG21_07645 PF02926 THUMP domain NUG21_07645 PF10672 S-adenosylmethionine-dependent methyltransferase NUG21_07645 PF01170 Putative RNA methylase family UPF0020 NUG21_07650 PF00072 Response regulator receiver domain NUG21_07655 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NUG21_07655 PF00072 Response regulator receiver domain NUG21_07655 PF01627 Hpt domain NUG21_07655 PF00512 His Kinase A (phospho-acceptor) domain NUG21_07655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUG21_07655 PF00672 HAMP domain NUG21_07660 PF04286 Protein of unknown function (DUF445) NUG21_07675 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NUG21_07675 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NUG21_07680 PF00202 Aminotransferase class-III NUG21_07685 PF01381 Helix-turn-helix NUG21_07685 PF07883 Cupin domain NUG21_07690 PF00171 Aldehyde dehydrogenase family NUG21_07705 PF07690 Major Facilitator Superfamily NUG21_07710 PF02634 FdhD/NarQ family NUG21_07715 PF00384 Molybdopterin oxidoreductase NUG21_07725 PF00818 Ice nucleation protein repeat NUG21_07725 PF00818 Ice nucleation protein repeat NUG21_07730 PF07690 Major Facilitator Superfamily NUG21_07730 PF00083 Sugar (and other) transporter NUG21_07735 PF00990 Diguanylate cyclase, GGDEF domain NUG21_07735 PF00072 Response regulator receiver domain NUG21_07740 PF01266 FAD dependent oxidoreductase NUG21_07745 PF00120 Glutamine synthetase, catalytic domain NUG21_07750 PF07722 Peptidase C26 NUG21_07755 PF00120 Glutamine synthetase, catalytic domain NUG21_07760 PF00202 Aminotransferase class-III NUG21_07765 PF13416 Bacterial extracellular solute-binding protein NUG21_07770 PF13533 Biotin-lipoyl like NUG21_07775 PF07690 Major Facilitator Superfamily NUG21_07780 PF02321 Outer membrane efflux protein NUG21_07785 PF00005 ABC transporter NUG21_07785 PF08402 TOBE domain NUG21_07790 PF00528 Binding-protein-dependent transport system inner membrane component NUG21_07795 PF00528 Binding-protein-dependent transport system inner membrane component NUG21_07800 PF00171 Aldehyde dehydrogenase family NUG21_07815 PF03471 Transporter associated domain NUG21_07815 PF00571 CBS domain NUG21_07825 PF02130 Uncharacterized protein family UPF0054 NUG21_07835 PF02562 PhoH-like protein NUG21_07855 PF04055 Radical SAM superfamily NUG21_07855 PF01938 TRAM domain NUG21_07855 PF00919 Uncharacterized protein family UPF0004 NUG21_07875 PF01464 Transglycosylase SLT domain NUG21_07880 PF00355 Rieske [2Fe-2S] domain NUG21_07880 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal NUG21_07885 PF00032 Cytochrome b(C-terminal)/b6/petD NUG21_07885 PF00033 Cytochrome b/b6/petB NUG21_07890 PF02167 Cytochrome C1 family NUG21_07895 PF00043 Glutathione S-transferase, C-terminal domain NUG21_07895 PF02798 Glutathione S-transferase, N-terminal domain NUG21_07900 PF04386 Stringent starvation protein B NUG21_07915 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain NUG21_07915 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain NUG21_07925 PF00731 AIR carboxylase NUG21_07930 PF02222 ATP-grasp domain NUG21_07930 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain NUG21_07935 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NUG21_07935 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NUG21_07940 PF00462 Glutaredoxin NUG21_07945 PF00106 short chain dehydrogenase NUG21_07950 PF01914 MarC family integral membrane protein NUG21_07955 PF00593 TonB dependent receptor NUG21_07960 PF11892 Domain of unknown function (DUF3412) NUG21_07960 PF03641 Possible lysine decarboxylase NUG21_07960 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases NUG21_07965 PF06580 Histidine kinase NUG21_07965 PF07694 5TMR of 5TMR-LYT NUG21_07990 PF05567 Neisseria PilC beta-propeller domain NUG21_07995 PF07963 Prokaryotic N-terminal methylation motif NUG21_07995 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor NUG21_08005 PF00114 Pilin (bacterial filament) NUG21_08005 PF07963 Prokaryotic N-terminal methylation motif NUG21_08010 PF12344 Ultra-violet resistance protein B NUG21_08010 PF00271 Helicase conserved C-terminal domain NUG21_08010 PF02151 UvrB/uvrC motif NUG21_08010 PF17757 UvrB interaction domain NUG21_08010 PF04851 Type III restriction enzyme, res subunit NUG21_08025 PF02534 Type IV secretory system Conjugative DNA transfer NUG21_08035 PF04335 VirB8 protein NUG21_08045 PF03743 Bacterial conjugation TrbI-like protein NUG21_08050 PF00437 Type II/IV secretion system protein NUG21_08060 PF04956 TrbC/VIRB2 family NUG21_08065 PF05101 Type IV secretory pathway, VirB3-like protein NUG21_08070 PF03135 CagE, TrbE, VirB family, component of type IV transporter system NUG21_08085 PF00128 Alpha amylase, catalytic domain NUG21_08095 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation NUG21_08095 PF14508 Glycosyl-hydrolase 97 N-terminal NUG21_08095 PF10566 Glycoside hydrolase 97 NUG21_08110 PF00128 Alpha amylase, catalytic domain NUG21_08110 PF00686 Starch binding domain NUG21_08115 PF00356 Bacterial regulatory proteins, lacI family NUG21_08120 PF03129 Anticodon binding domain NUG21_08120 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NUG21_08120 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NUG21_08120 PF02824 TGS domain NUG21_08125 PF00707 Translation initiation factor IF-3, C-terminal domain NUG21_08125 PF05198 Translation initiation factor IF-3, N-terminal domain NUG21_08130 PF01632 Ribosomal protein L35 NUG21_08135 PF00453 Ribosomal protein L20 NUG21_08140 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain NUG21_08140 PF01409 tRNA synthetases class II core domain (F) NUG21_08145 PF01588 Putative tRNA binding domain NUG21_08145 PF03147 Ferredoxin-fold anticodon binding domain NUG21_08145 PF03483 B3/4 domain NUG21_08145 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain NUG21_08145 PF03484 tRNA synthetase B5 domain NUG21_08150 PF00216 Bacterial DNA-binding protein NUG21_08155 PF13411 MerR HTH family regulatory protein NUG21_08180 PF02397 Bacterial sugar transferase NUG21_08195 PF13439 Glycosyltransferase Family 4 NUG21_08195 PF00534 Glycosyl transferases group 1 NUG21_08205 PF01943 Polysaccharide biosynthesis protein NUG21_08205 PF14667 Polysaccharide biosynthesis C-terminal domain NUG21_08220 PF03808 Glycosyl transferase WecB/TagA/CpsF family NUG21_08240 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NUG21_08240 PF02779 Transketolase, pyrimidine binding domain NUG21_08240 PF02780 Transketolase, C-terminal domain NUG21_08250 PF02770 Acyl-CoA dehydrogenase, middle domain NUG21_08250 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NUG21_08250 PF12806 Acetyl-CoA dehydrogenase C-terminal like NUG21_08250 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NUG21_08255 PF00196 Bacterial regulatory proteins, luxR family NUG21_08255 PF00072 Response regulator receiver domain NUG21_08260 PF07730 Histidine kinase NUG21_08260 PF17200 Single Cache domain 2 NUG21_08265 PF03793 PASTA domain NUG21_08265 PF00069 Protein kinase domain NUG21_08280 PF00082 Subtilase family NUG21_08285 PF13533 Biotin-lipoyl like NUG21_08295 PF04632 Fusaric acid resistance protein family NUG21_08320 PF08212 Lipocalin-like domain NUG21_08330 PF02601 Exonuclease VII, large subunit NUG21_08330 PF13742 OB-fold nucleic acid binding domain NUG21_08335 PF08331 Domain of unknown function (DUF1730) NUG21_08340 PF03853 YjeF-related protein N-terminus NUG21_08340 PF01256 Carbohydrate kinase NUG21_08345 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE NUG21_08350 PF11741 AMIN domain NUG21_08350 PF01520 N-acetylmuramoyl-L-alanine amidase NUG21_08355 PF08676 MutL C terminal dimerisation domain NUG21_08355 PF01119 DNA mismatch repair protein, C-terminal domain NUG21_08370 PF07879 PHB/PHA accumulation regulator DNA-binding domain NUG21_08370 PF05233 PHB accumulation regulatory domain NUG21_08375 PF00106 short chain dehydrogenase NUG21_08380 PF00749 tRNA synthetases class I (E and Q), catalytic domain NUG21_08385 PF01435 Peptidase family M48 NUG21_08390 PF00563 EAL domain NUG21_08390 PF00990 Diguanylate cyclase, GGDEF domain NUG21_08390 PF00072 Response regulator receiver domain NUG21_08400 PF07152 YaeQ protein NUG21_08405 PF00313 'Cold-shock' DNA-binding domain NUG21_08410 PF02798 Glutathione S-transferase, N-terminal domain NUG21_08410 PF00043 Glutathione S-transferase, C-terminal domain NUG21_08415 PF00135 Carboxylesterase family NUG21_08420 PF02696 Uncharacterized ACR, YdiU/UPF0061 family NUG21_08430 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NUG21_08430 PF00529 HlyD membrane-fusion protein of T1SS NUG21_08435 PF00873 AcrB/AcrD/AcrF family NUG21_08440 PF00156 Phosphoribosyl transferase domain NUG21_08450 PF00271 Helicase conserved C-terminal domain NUG21_08450 PF00270 DEAD/DEAH box helicase NUG21_08450 PF03880 DbpA RNA binding domain NUG21_08455 PF12848 ABC transporter NUG21_08455 PF16326 ABC transporter C-terminal domain NUG21_08455 PF00005 ABC transporter NUG21_08470 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NUG21_08470 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NUG21_08480 PF14310 Fibronectin type III-like domain NUG21_08480 PF00933 Glycosyl hydrolase family 3 N terminal domain NUG21_08480 PF01915 Glycosyl hydrolase family 3 C-terminal domain NUG21_08490 PF00854 POT family NUG21_08520 PF01432 Peptidase family M3 NUG21_08525 PF00255 Glutathione peroxidase NUG21_08530 PF00970 Oxidoreductase FAD-binding domain NUG21_08530 PF00175 Oxidoreductase NAD-binding domain NUG21_08540 PF00005 ABC transporter NUG21_08555 PF02627 Carboxymuconolactone decarboxylase family NUG21_08560 PF04542 Sigma-70 region 2 NUG21_08560 PF08281 Sigma-70, region 4 NUG21_08565 PF05683 Fumarase C-terminus NUG21_08565 PF05681 Fumarate hydratase (Fumerase) NUG21_08570 PF02798 Glutathione S-transferase, N-terminal domain NUG21_08570 PF14497 Glutathione S-transferase, C-terminal domain NUG21_08585 PF02253 Phospholipase A1 NUG21_08595 PF00313 'Cold-shock' DNA-binding domain NUG21_08610 PF00899 ThiF family NUG21_08615 PF01590 GAF domain NUG21_08615 PF00563 EAL domain NUG21_08615 PF00360 Phytochrome region NUG21_08615 PF00990 Diguanylate cyclase, GGDEF domain NUG21_08620 PF01026 TatD related DNase NUG21_08635 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NUG21_08635 PF02770 Acyl-CoA dehydrogenase, middle domain NUG21_08635 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NUG21_08645 PF13417 Glutathione S-transferase, N-terminal domain NUG21_08650 PF03358 NADPH-dependent FMN reductase NUG21_08655 PF03796 DnaB-like helicase C terminal domain NUG21_08655 PF00772 DnaB-like helicase N terminal domain NUG21_08665 PF03441 FAD binding domain of DNA photolyase NUG21_08665 PF00875 DNA photolyase NUG21_08670 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain NUG21_08670 PF06974 Protein of unknown function (DUF1298) NUG21_08675 PF00691 OmpA family NUG21_08675 PF05736 OprF membrane domain NUG21_08680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUG21_08680 PF03466 LysR substrate binding domain NUG21_08695 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NUG21_08700 PF00873 AcrB/AcrD/AcrF family NUG21_08710 PF02321 Outer membrane efflux protein NUG21_08715 PF00990 Diguanylate cyclase, GGDEF domain NUG21_08715 PF05230 MASE2 domain NUG21_08735 PF00082 Subtilase family NUG21_08740 PF01668 SmpB protein NUG21_08750 PF03658 RnfH family Ubiquitin NUG21_08755 PF04355 SmpA / OmlA family NUG21_08760 PF01475 Ferric uptake regulator family NUG21_08765 PF02463 RecF/RecN/SMC N terminal domain NUG21_08770 PF01628 HrcA protein C terminal domain NUG21_08770 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding NUG21_08775 PF01025 GrpE NUG21_08780 PF00012 Hsp70 protein NUG21_08785 PF01556 DnaJ C terminal domain NUG21_08785 PF00684 DnaJ central domain NUG21_08785 PF00226 DnaJ domain NUG21_08790 PF08543 Phosphomethylpyrimidine kinase NUG21_08795 PF02153 Prephenate dehydrogenase NUG21_08795 PF01817 Chorismate mutase type II NUG21_08805 PF00005 ABC transporter NUG21_08805 PF00664 ABC transporter transmembrane region NUG21_08810 PF01205 Uncharacterized protein family UPF0029 NUG21_08820 PF04542 Sigma-70 region 2 NUG21_08820 PF08281 Sigma-70, region 4 NUG21_08825 PF00563 EAL domain NUG21_08825 PF08447 PAS fold NUG21_08825 PF00990 Diguanylate cyclase, GGDEF domain NUG21_08825 PF08448 PAS fold NUG21_08830 PF03641 Possible lysine decarboxylase NUG21_08835 PF07992 Pyridine nucleotide-disulphide oxidoreductase NUG21_08835 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NUG21_08840 PF00364 Biotin-requiring enzyme NUG21_08840 PF02817 e3 binding domain NUG21_08840 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NUG21_08845 PF00676 Dehydrogenase E1 component NUG21_08845 PF16078 2-oxoglutarate dehydrogenase N-terminus NUG21_08845 PF02779 Transketolase, pyrimidine binding domain NUG21_08845 PF16870 2-oxoglutarate dehydrogenase C-terminal NUG21_08855 PF08007 Cupin superfamily protein NUG21_08865 PF08328 Adenylosuccinate lyase C-terminal NUG21_08865 PF00206 Lyase NUG21_08870 PF00571 CBS domain NUG21_08870 PF03471 Transporter associated domain NUG21_08870 PF01595 Cyclin M transmembrane N-terminal domain NUG21_08880 PF10415 Fumarase C C-terminus NUG21_08880 PF00206 Lyase NUG21_08905 PF00005 ABC transporter NUG21_08910 PF00392 Bacterial regulatory proteins, gntR family NUG21_08920 PF00255 Glutathione peroxidase NUG21_08925 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NUG21_08925 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NUG21_08930 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NUG21_08930 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NUG21_08930 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NUG21_08935 PF04102 SlyX NUG21_08945 PF01757 Acyltransferase family NUG21_08955 PF00809 Pterin binding enzyme NUG21_08955 PF02310 B12 binding domain NUG21_08955 PF02574 Homocysteine S-methyltransferase NUG21_08955 PF02965 Vitamin B12 dependent methionine synthase, activation domain NUG21_08955 PF02607 B12 binding domain NUG21_08960 PF02310 B12 binding domain NUG21_08960 PF02607 B12 binding domain NUG21_08960 PF02965 Vitamin B12 dependent methionine synthase, activation domain NUG21_08960 PF00809 Pterin binding enzyme NUG21_08960 PF02574 Homocysteine S-methyltransferase NUG21_08965 PF01209 ubiE/COQ5 methyltransferase family NUG21_08970 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NUG21_08970 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NUG21_08970 PF02770 Acyl-CoA dehydrogenase, middle domain NUG21_08975 PF00873 AcrB/AcrD/AcrF family NUG21_08980 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NUG21_08980 PF00529 HlyD membrane-fusion protein of T1SS NUG21_08990 PF05088 Bacterial NAD-glutamate dehydrogenase NUG21_08995 PF01513 ATP-NAD kinase NUG21_09025 PF08411 Exonuclease C-terminal NUG21_09025 PF00929 Exonuclease NUG21_09030 PF01494 FAD binding domain NUG21_09035 PF00266 Aminotransferase class-V NUG21_09045 PF06052 3-hydroxyanthranilic acid dioxygenase NUG21_09050 PF00484 Carbonic anhydrase NUG21_09095 PF00072 Response regulator receiver domain NUG21_09095 PF00196 Bacterial regulatory proteins, luxR family NUG21_09115 PF00152 tRNA synthetases class II (D, K and N) NUG21_09115 PF01336 OB-fold nucleic acid binding domain NUG21_09120 PF01521 Iron-sulphur cluster biosynthesis NUG21_09125 PF01250 Ribosomal protein S6 NUG21_09130 PF01084 Ribosomal protein S18 NUG21_09135 PF01281 Ribosomal protein L9, N-terminal domain NUG21_09135 PF03948 Ribosomal protein L9, C-terminal domain NUG21_09140 PF02463 RecF/RecN/SMC N terminal domain NUG21_09145 PF04354 ZipA, C-terminal FtsZ-binding domain NUG21_09150 PF00155 Aminotransferase class I and II NUG21_09155 PF00533 BRCA1 C Terminus (BRCT) domain NUG21_09155 PF12826 Helix-hairpin-helix motif NUG21_09155 PF03119 NAD-dependent DNA ligase C4 zinc finger domain NUG21_09155 PF03120 NAD-dependent DNA ligase OB-fold domain NUG21_09155 PF01653 NAD-dependent DNA ligase adenylation domain NUG21_09165 PF00152 tRNA synthetases class II (D, K and N) NUG21_09175 PF01008 Initiation factor 2 subunit family NUG21_09180 PF00521 DNA gyrase/topoisomerase IV, subunit A NUG21_09180 PF03989 DNA gyrase C-terminal domain, beta-propeller NUG21_09185 PF13360 PQQ-like domain NUG21_09220 PF01175 Urocanase Rossmann-like domain NUG21_09220 PF17391 Urocanase N-terminal domain NUG21_09220 PF17392 Urocanase C-terminal domain NUG21_09230 PF00221 Aromatic amino acid lyase NUG21_09235 PF01979 Amidohydrolase family NUG21_09245 PF07702 UTRA domain NUG21_09245 PF00392 Bacterial regulatory proteins, gntR family NUG21_09250 PF00106 short chain dehydrogenase NUG21_09285 PF01794 Ferric reductase like transmembrane component NUG21_09290 PF00174 Oxidoreductase molybdopterin binding domain NUG21_09295 PF00266 Aminotransferase class-V NUG21_09300 PF00800 Prephenate dehydratase NUG21_09300 PF01817 Chorismate mutase type II NUG21_09300 PF01842 ACT domain NUG21_09310 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NUG21_09320 PF03544 Gram-negative bacterial TonB protein C-terminal NUG21_09325 PF02403 Seryl-tRNA synthetase N-terminal domain NUG21_09325 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NUG21_09330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUG21_09330 PF03466 LysR substrate binding domain NUG21_09340 PF12852 Cupin NUG21_09340 PF12833 Helix-turn-helix domain NUG21_09395 PF00196 Bacterial regulatory proteins, luxR family NUG21_09395 PF00072 Response regulator receiver domain NUG21_09400 PF10150 Ribonuclease E/G family NUG21_09400 PF00575 S1 RNA binding domain NUG21_09400 PF12111 Polyribonucleotide phosphorylase C terminal NUG21_09405 PF00849 RNA pseudouridylate synthase NUG21_09405 PF01479 S4 domain NUG21_09410 PF11737 Protein of unknown function (DUF3300) NUG21_09415 PF02535 ZIP Zinc transporter NUG21_09425 PF01329 Pterin 4 alpha carbinolamine dehydratase NUG21_09430 PF01106 NifU-like domain NUG21_09440 PF00034 Cytochrome c NUG21_09450 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NUG21_09450 PF00529 HlyD membrane-fusion protein of T1SS NUG21_09455 PF00873 AcrB/AcrD/AcrF family NUG21_09460 PF00873 AcrB/AcrD/AcrF family NUG21_09470 PF00795 Carbon-nitrogen hydrolase NUG21_09475 PF04371 Porphyromonas-type peptidyl-arginine deiminase NUG21_09485 PF00444 Ribosomal protein L36 NUG21_09490 PF02224 Cytidylate kinase NUG21_09495 PF00575 S1 RNA binding domain NUG21_09500 PF00216 Bacterial DNA-binding protein NUG21_09510 PF18073 Rubredoxin metal binding domain NUG21_09515 PF00953 Glycosyl transferase family 4 NUG21_09520 PF02719 Polysaccharide biosynthesis protein NUG21_09525 PF00483 Nucleotidyl transferase NUG21_09530 PF02803 Thiolase, C-terminal domain NUG21_09530 PF00108 Thiolase, N-terminal domain NUG21_09535 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NUG21_09535 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NUG21_09535 PF00378 Enoyl-CoA hydratase/isomerase NUG21_09545 PF00334 Nucleoside diphosphate kinase NUG21_09550 PF04055 Radical SAM superfamily NUG21_09560 PF13464 Domain of unknown function (DUF4115) NUG21_09565 PF09976 Tetratricopeptide repeat-like domain NUG21_09570 PF01011 PQQ enzyme repeat NUG21_09570 PF13360 PQQ-like domain NUG21_09575 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NUG21_09575 PF01926 50S ribosome-binding GTPase NUG21_09580 PF12804 MobA-like NTP transferase domain NUG21_09585 PF00994 Probable molybdopterin binding domain NUG21_09585 PF03454 MoeA C-terminal region (domain IV) NUG21_09585 PF03453 MoeA N-terminal region (domain I and II) NUG21_09590 PF00899 ThiF family NUG21_09595 PF02254 TrkA-N domain NUG21_09595 PF00999 Sodium/hydrogen exchanger family NUG21_09600 PF12146 Serine aminopeptidase, S33 NUG21_09610 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NUG21_09610 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NUG21_09615 PF00571 CBS domain NUG21_09615 PF00478 IMP dehydrogenase / GMP reductase domain NUG21_09620 PF00117 Glutamine amidotransferase class-I NUG21_09620 PF02540 NAD synthase NUG21_09620 PF00958 GMP synthase C terminal domain NUG21_09625 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) NUG21_09630 PF00361 Proton-conducting membrane transporter NUG21_09630 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus NUG21_09630 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NUG21_09635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUG21_09635 PF03466 LysR substrate binding domain NUG21_09645 PF01494 FAD binding domain NUG21_09650 PF13673 Acetyltransferase (GNAT) domain NUG21_09660 PF03466 LysR substrate binding domain NUG21_09660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUG21_09670 PF01965 DJ-1/PfpI family NUG21_09675 PF00107 Zinc-binding dehydrogenase NUG21_09675 PF08240 Alcohol dehydrogenase GroES-like domain NUG21_09680 PF03466 LysR substrate binding domain NUG21_09680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUG21_09695 PF16736 Single Cache-like NUG21_09695 PF00989 PAS fold NUG21_09695 PF00512 His Kinase A (phospho-acceptor) domain NUG21_09695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUG21_09725 PF01566 Natural resistance-associated macrophage protein NUG21_09730 PF01325 Iron dependent repressor, N-terminal DNA binding domain NUG21_09730 PF02742 Iron dependent repressor, metal binding and dimerisation domain NUG21_09735 PF14437 MafB19-like deaminase NUG21_09740 PF00929 Exonuclease NUG21_09745 PF00924 Mechanosensitive ion channel NUG21_09745 PF05552 Conserved TM helix NUG21_09750 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NUG21_09750 PF00391 PEP-utilising enzyme, mobile domain NUG21_09750 PF02896 PEP-utilising enzyme, TIM barrel domain NUG21_09755 PF03618 Kinase/pyrophosphorylase NUG21_09775 PF01066 CDP-alcohol phosphatidyltransferase NUG21_09785 PF00561 alpha/beta hydrolase fold NUG21_09790 PF04024 PspC domain NUG21_09800 PF01266 FAD dependent oxidoreductase NUG21_09800 PF05430 S-adenosyl-L-methionine-dependent methyltransferase NUG21_09810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUG21_09810 PF00072 Response regulator receiver domain NUG21_09810 PF13426 PAS domain NUG21_09815 PF09371 Tex-like protein N-terminal domain NUG21_09815 PF17674 HHH domain NUG21_09815 PF16921 Tex protein YqgF-like domain NUG21_09815 PF00575 S1 RNA binding domain NUG21_09820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUG21_09820 PF00497 Bacterial extracellular solute-binding proteins, family 3 NUG21_09820 PF00072 Response regulator receiver domain NUG21_09820 PF00989 PAS fold NUG21_09820 PF01627 Hpt domain NUG21_09820 PF00512 His Kinase A (phospho-acceptor) domain NUG21_09860 PF00873 AcrB/AcrD/AcrF family NUG21_09865 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NUG21_09875 PF02321 Outer membrane efflux protein NUG21_09880 PF00486 Transcriptional regulatory protein, C terminal NUG21_09880 PF00072 Response regulator receiver domain NUG21_09885 PF00672 HAMP domain NUG21_09885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUG21_09885 PF00512 His Kinase A (phospho-acceptor) domain NUG21_10060 PF00266 Aminotransferase class-V NUG21_10090 PF01494 FAD binding domain NUG21_10095 PF03466 LysR substrate binding domain NUG21_10095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUG21_10120 PF00005 ABC transporter NUG21_10150 PF00664 ABC transporter transmembrane region NUG21_10150 PF00005 ABC transporter NUG21_10170 PF13439 Glycosyltransferase Family 4 NUG21_10170 PF00534 Glycosyl transferases group 1 NUG21_10185 PF08241 Methyltransferase domain NUG21_10210 PF00535 Glycosyl transferase family 2 NUG21_10215 PF01943 Polysaccharide biosynthesis protein NUG21_10220 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NUG21_10240 PF05523 WxcM-like, C-terminal NUG21_10255 PF00034 Cytochrome c NUG21_10265 PF08281 Sigma-70, region 4 NUG21_10265 PF04542 Sigma-70 region 2 NUG21_10275 PF00082 Subtilase family NUG21_10280 PF01578 Cytochrome C assembly protein NUG21_10290 PF03100 CcmE NUG21_10295 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal NUG21_10295 PF01578 Cytochrome C assembly protein NUG21_10300 PF08534 Redoxin NUG21_10305 PF03918 Cytochrome C biogenesis protein NUG21_10330 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NUG21_10335 PF16193 AAA C-terminal domain NUG21_10335 PF00004 ATPase family associated with various cellular activities (AAA) NUG21_10335 PF12002 MgsA AAA+ ATPase C terminal NUG21_10340 PF01545 Cation efflux family NUG21_10345 PF03548 Outer membrane lipoprotein carrier protein LolA NUG21_10355 PF17854 FtsK alpha domain NUG21_10355 PF13491 4TM region of DNA translocase FtsK/SpoIIIE NUG21_10355 PF09397 Ftsk gamma domain NUG21_10355 PF01580 FtsK/SpoIIIE family NUG21_10360 PF07992 Pyridine nucleotide-disulphide oxidoreductase NUG21_10370 PF03588 Leucyl/phenylalanyl-tRNA protein transferase NUG21_10375 PF01176 Translation initiation factor 1A / IF-1 NUG21_10380 PF10431 C-terminal, D2-small domain, of ClpB protein NUG21_10380 PF02861 Clp amino terminal domain, pathogenicity island component NUG21_10380 PF17871 AAA lid domain NUG21_10380 PF07724 AAA domain (Cdc48 subfamily) NUG21_10380 PF00004 ATPase family associated with various cellular activities (AAA) NUG21_10385 PF02617 ATP-dependent Clp protease adaptor protein ClpS NUG21_10395 PF00293 NUDIX domain NUG21_10405 PF04356 Protein of unknown function (DUF489) NUG21_10410 PF12729 Four helix bundle sensory module for signal transduction NUG21_10410 PF00672 HAMP domain NUG21_10410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUG21_10420 PF00005 ABC transporter NUG21_10430 PF00990 Diguanylate cyclase, GGDEF domain NUG21_10430 PF00563 EAL domain NUG21_10430 PF03707 Bacterial signalling protein N terminal repeat NUG21_10435 PF07730 Histidine kinase NUG21_10435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUG21_10440 PF00990 Diguanylate cyclase, GGDEF domain NUG21_10440 PF03707 Bacterial signalling protein N terminal repeat NUG21_10440 PF00563 EAL domain NUG21_10445 PF00512 His Kinase A (phospho-acceptor) domain NUG21_10445 PF13188 PAS domain NUG21_10445 PF08448 PAS fold NUG21_10445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUG21_10445 PF00072 Response regulator receiver domain NUG21_10465 PF01584 CheW-like domain NUG21_10465 PF00072 Response regulator receiver domain NUG21_10475 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NUG21_10475 PF00460 Flagella basal body rod protein NUG21_10485 PF07559 Flagellar basal body protein FlaE NUG21_10485 PF00460 Flagella basal body rod protein NUG21_10485 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NUG21_10490 PF00460 Flagella basal body rod protein NUG21_10490 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NUG21_10495 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NUG21_10495 PF00460 Flagella basal body rod protein NUG21_10500 PF02107 Flagellar L-ring protein NUG21_10505 PF02119 Flagellar P-ring protein NUG21_10510 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase NUG21_10510 PF10135 Rod binding protein NUG21_10515 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NUG21_10515 PF00460 Flagella basal body rod protein NUG21_10525 PF00700 Bacterial flagellin C-terminal helical region NUG21_10525 PF00669 Bacterial flagellin N-terminal helical region NUG21_10530 PF00669 Bacterial flagellin N-terminal helical region NUG21_10530 PF00700 Bacterial flagellin C-terminal helical region NUG21_10540 PF02561 Flagellar protein FliS NUG21_10555 PF00072 Response regulator receiver domain NUG21_10555 PF00196 Bacterial regulatory proteins, luxR family NUG21_10560 PF04963 Sigma-54 factor, core binding domain NUG21_10560 PF04552 Sigma-54, DNA binding domain NUG21_10560 PF00309 Sigma-54 factor, Activator interacting domain (AID) NUG21_10565 PF01339 CheB methylesterase NUG21_10565 PF00072 Response regulator receiver domain NUG21_10570 PF00158 Sigma-54 interaction domain NUG21_10570 PF06490 Flagellar regulatory protein FleQ NUG21_10570 PF02954 Bacterial regulatory protein, Fis family NUG21_10575 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NUG21_10585 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NUG21_10585 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NUG21_10635 PF00534 Glycosyl transferases group 1 NUG21_10635 PF00535 Glycosyl transferase family 2 NUG21_10640 PF02049 Flagellar hook-basal body complex protein FliE NUG21_10645 PF01514 Secretory protein of YscJ/FliF family NUG21_10645 PF08345 Flagellar M-ring protein C-terminal NUG21_10650 PF01706 FliG C-terminal domain NUG21_10650 PF14841 FliG middle domain NUG21_10650 PF14842 FliG N-terminal domain NUG21_10660 PF18269 T3SS EscN ATPase C-terminal domain NUG21_10660 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NUG21_10680 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NUG21_10680 PF02154 Flagellar motor switch protein FliM NUG21_10685 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NUG21_10690 PF04347 Flagellar biosynthesis protein, FliO NUG21_10695 PF00813 FliP family NUG21_10700 PF01313 Bacterial export proteins, family 3 NUG21_10705 PF01311 Bacterial export proteins, family 1 NUG21_10710 PF00990 Diguanylate cyclase, GGDEF domain NUG21_10715 PF01312 FlhB HrpN YscU SpaS Family NUG21_10720 PF00771 FHIPEP family NUG21_10725 PF00448 SRP54-type protein, GTPase domain NUG21_10730 PF10609 NUBPL iron-transfer P-loop NTPase NUG21_10735 PF04545 Sigma-70, region 4 NUG21_10735 PF04539 Sigma-70 region 3 NUG21_10735 PF04542 Sigma-70 region 2 NUG21_10740 PF00072 Response regulator receiver domain NUG21_10745 PF04344 Chemotaxis phosphatase, CheZ NUG21_10750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUG21_10750 PF02895 Signal transducing histidine kinase, homodimeric domain NUG21_10750 PF01584 CheW-like domain NUG21_10750 PF01627 Hpt domain NUG21_10750 PF00072 Response regulator receiver domain NUG21_10755 PF01618 MotA/TolQ/ExbB proton channel family NUG21_10760 PF00691 OmpA family NUG21_10760 PF13677 Membrane MotB of proton-channel complex MotA/MotB NUG21_10765 PF13614 AAA domain NUG21_10770 PF01584 CheW-like domain NUG21_10780 PF00072 Response regulator receiver domain NUG21_10785 PF01627 Hpt domain NUG21_10785 PF02895 Signal transducing histidine kinase, homodimeric domain NUG21_10785 PF09078 CheY binding NUG21_10785 PF01584 CheW-like domain NUG21_10785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUG21_10790 PF00672 HAMP domain NUG21_10790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUG21_10790 PF02203 Tar ligand binding domain homologue NUG21_10795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUG21_10795 PF00672 HAMP domain NUG21_10800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUG21_10800 PF00672 HAMP domain NUG21_10810 PF02203 Tar ligand binding domain homologue NUG21_10810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUG21_10810 PF00672 HAMP domain NUG21_10825 PF02203 Tar ligand binding domain homologue NUG21_10825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUG21_10825 PF00672 HAMP domain NUG21_10835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUG21_10835 PF00672 HAMP domain NUG21_10835 PF02203 Tar ligand binding domain homologue NUG21_10840 PF07238 PilZ domain NUG21_10840 PF07317 Flagellar regulator YcgR NUG21_10845 PF01584 CheW-like domain NUG21_10855 PF02203 Tar ligand binding domain homologue NUG21_10855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUG21_10855 PF00672 HAMP domain NUG21_10860 PF08269 Cache domain NUG21_10860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUG21_10865 PF02203 Tar ligand binding domain homologue NUG21_10865 PF00672 HAMP domain NUG21_10865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUG21_10870 PF01739 CheR methyltransferase, SAM binding domain NUG21_10870 PF03705 CheR methyltransferase, all-alpha domain NUG21_10875 PF03975 CheD chemotactic sensory transduction NUG21_10880 PF01339 CheB methylesterase NUG21_10880 PF00072 Response regulator receiver domain NUG21_10885 PF00990 Diguanylate cyclase, GGDEF domain NUG21_10885 PF03707 Bacterial signalling protein N terminal repeat NUG21_10885 PF00563 EAL domain NUG21_10890 PF00330 Aconitase family (aconitate hydratase) NUG21_10890 PF06434 Aconitate hydratase 2 N-terminus NUG21_10890 PF11791 Aconitate B N-terminal domain NUG21_10910 PF00528 Binding-protein-dependent transport system inner membrane component NUG21_10915 PF00005 ABC transporter NUG21_10925 PF04303 PrpF protein NUG21_10930 PF03466 LysR substrate binding domain NUG21_10930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUG21_10935 PF00330 Aconitase family (aconitate hydratase) NUG21_10935 PF00694 Aconitase C-terminal domain NUG21_10940 PF00501 AMP-binding enzyme NUG21_10940 PF13193 AMP-binding enzyme C-terminal domain NUG21_10945 PF00378 Enoyl-CoA hydratase/isomerase NUG21_10950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUG21_10950 PF00512 His Kinase A (phospho-acceptor) domain NUG21_10950 PF01627 Hpt domain NUG21_10950 PF00072 Response regulator receiver domain NUG21_10955 PF00072 Response regulator receiver domain NUG21_10960 PF01336 OB-fold nucleic acid binding domain NUG21_10960 PF00152 tRNA synthetases class II (D, K and N) NUG21_10970 PF04397 LytTr DNA-binding domain NUG21_10970 PF00072 Response regulator receiver domain NUG21_10975 PF01368 DHH family NUG21_10975 PF02272 DHHA1 domain NUG21_10975 PF17768 RecJ OB domain NUG21_10985 PF01272 Transcription elongation factor, GreA/GreB, C-term NUG21_10985 PF03449 Transcription elongation factor, N-terminal NUG21_10990 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NUG21_10990 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NUG21_10990 PF02142 MGS-like domain NUG21_11000 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain NUG21_11000 PF00117 Glutamine amidotransferase class-I NUG21_11005 PF05173 Dihydrodipicolinate reductase, C-terminus NUG21_11005 PF01113 Dihydrodipicolinate reductase, N-terminus NUG21_11010 PF03473 MOSC domain NUG21_11010 PF03475 3-alpha domain NUG21_11015 PF00155 Aminotransferase class I and II NUG21_11025 PF07664 Ferrous iron transport protein B C terminus NUG21_11025 PF07670 Nucleoside recognition NUG21_11025 PF02421 Ferrous iron transport protein B NUG21_11035 PF00378 Enoyl-CoA hydratase/isomerase NUG21_11045 PF00682 HMGL-like NUG21_11050 PF00106 short chain dehydrogenase NUG21_11055 PF01132 Elongation factor P (EF-P) OB domain NUG21_11055 PF08207 Elongation factor P (EF-P) KOW-like domain NUG21_11055 PF09285 Elongation factor P, C-terminal NUG21_11075 PF02913 FAD linked oxidases, C-terminal domain NUG21_11075 PF01565 FAD binding domain NUG21_11080 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NUG21_11080 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NUG21_11090 PF13520 Amino acid permease NUG21_11095 PF13520 Amino acid permease NUG21_11100 PF00596 Class II Aldolase and Adducin N-terminal domain NUG21_11105 PF03079 ARD/ARD' family NUG21_11125 PF01502 Phosphoribosyl-AMP cyclohydrolase NUG21_11125 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase NUG21_11130 PF00977 Histidine biosynthesis protein NUG21_11135 PF00977 Histidine biosynthesis protein NUG21_11140 PF00117 Glutamine amidotransferase class-I NUG21_11145 PF00475 Imidazoleglycerol-phosphate dehydratase NUG21_11150 PF00155 Aminotransferase class I and II NUG21_11155 PF00815 Histidinol dehydrogenase NUG21_11160 PF01634 ATP phosphoribosyltransferase NUG21_11160 PF08029 HisG, C-terminal domain NUG21_11175 PF03129 Anticodon binding domain NUG21_11175 PF13393 Histidyl-tRNA synthetase NUG21_11180 PF00027 Cyclic nucleotide-binding domain NUG21_11180 PF13545 Crp-like helix-turn-helix domain NUG21_11190 PF00291 Pyridoxal-phosphate dependent enzyme NUG21_11190 PF14821 Threonine synthase N terminus NUG21_11195 PF00288 GHMP kinases N terminal domain NUG21_11195 PF08544 GHMP kinases C terminal NUG21_11200 PF00696 Amino acid kinase family NUG21_11200 PF01842 ACT domain NUG21_11200 PF13840 ACT domain NUG21_11200 PF00742 Homoserine dehydrogenase NUG21_11200 PF03447 Homoserine dehydrogenase, NAD binding domain NUG21_11215 PF00171 Aldehyde dehydrogenase family NUG21_11230 PF01180 Dihydroorotate dehydrogenase NUG21_11235 PF01565 FAD binding domain NUG21_11235 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain NUG21_11245 PF01177 Asp/Glu/Hydantoin racemase NUG21_11255 PF01047 MarR family NUG21_11260 PF01494 FAD binding domain NUG21_11265 PF01569 PAP2 superfamily NUG21_11270 PF04551 GcpE protein NUG21_11275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUG21_11275 PF00512 His Kinase A (phospho-acceptor) domain NUG21_11280 PF00072 Response regulator receiver domain NUG21_11285 PF03707 Bacterial signalling protein N terminal repeat NUG21_11285 PF00990 Diguanylate cyclase, GGDEF domain NUG21_11285 PF00563 EAL domain NUG21_11290 PF00474 Sodium:solute symporter family NUG21_11295 PF01915 Glycosyl hydrolase family 3 C-terminal domain NUG21_11295 PF00933 Glycosyl hydrolase family 3 N terminal domain NUG21_11295 PF14310 Fibronectin type III-like domain NUG21_11305 PF08448 PAS fold NUG21_11305 PF01339 CheB methylesterase NUG21_11305 PF01739 CheR methyltransferase, SAM binding domain NUG21_11305 PF03705 CheR methyltransferase, all-alpha domain NUG21_11310 PF00342 Phosphoglucose isomerase NUG21_11315 PF02261 Aspartate decarboxylase NUG21_11320 PF02569 Pantoate-beta-alanine ligase NUG21_11325 PF02548 Ketopantoate hydroxymethyltransferase NUG21_11330 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NUG21_11335 PF12626 Polymerase A arginine-rich C-terminus NUG21_11335 PF12627 Probable RNA and SrmB- binding site of polymerase A NUG21_11335 PF01743 Poly A polymerase head domain NUG21_11345 PF02649 Type I GTP cyclohydrolase folE2 NUG21_11350 PF00083 Sugar (and other) transporter NUG21_11360 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NUG21_11360 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NUG21_11365 PF17137 Domain of unknown function (DUF5110) NUG21_11365 PF01055 Glycosyl hydrolases family 31 NUG21_11365 PF16338 Domain of unknown function (DUF4968) NUG21_11385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUG21_11385 PF03466 LysR substrate binding domain NUG21_11390 PF01081 KDPG and KHG aldolase NUG21_11395 PF13378 Enolase C-terminal domain-like NUG21_11395 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NUG21_11400 PF08450 SMP-30/Gluconolactonase/LRE-like region NUG21_11405 PF05035 2-keto-3-deoxy-galactonokinase NUG21_11410 PF00037 4Fe-4S binding domain NUG21_11410 PF11953 Domain of unknown function (DUF3470) NUG21_11420 PF00701 Dihydrodipicolinate synthetase family NUG21_11430 PF00578 AhpC/TSA family NUG21_11435 PF02562 PhoH-like protein NUG21_11435 PF13638 PIN domain NUG21_11450 PF02581 Thiamine monophosphate synthase NUG21_11450 PF08543 Phosphomethylpyrimidine kinase NUG21_11470 PF00106 short chain dehydrogenase NUG21_11475 PF00581 Rhodanese-like domain NUG21_11475 PF00899 ThiF family NUG21_11480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUG21_11480 PF03466 LysR substrate binding domain NUG21_11485 PF17954 Quercetinase C-terminal cupin domain NUG21_11485 PF02678 Pirin NUG21_11490 PF00128 Alpha amylase, catalytic domain NUG21_11490 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NUG21_11520 PF02599 Global regulator protein family NUG21_11525 PF01411 tRNA synthetases class II (A) NUG21_11525 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NUG21_11525 PF02272 DHHA1 domain NUG21_11530 PF02631 RecX family NUG21_11535 PF00154 recA bacterial DNA recombination protein NUG21_11540 PF01726 LexA DNA binding domain NUG21_11540 PF00717 Peptidase S24-like NUG21_11545 PF03109 ABC1 family NUG21_11550 PF02464 Competence-damaged protein NUG21_11555 PF01926 50S ribosome-binding GTPase NUG21_11555 PF16360 GTP-binding GTPase Middle Region NUG21_11555 PF13167 GTP-binding GTPase N-terminal NUG21_11560 PF17209 Hfq protein NUG21_11570 PF00809 Pterin binding enzyme NUG21_11575 PF17862 AAA+ lid domain NUG21_11575 PF06480 FtsH Extracellular NUG21_11575 PF01434 Peptidase family M41 NUG21_11575 PF00004 ATPase family associated with various cellular activities (AAA) NUG21_11580 PF01728 FtsJ-like methyltransferase NUG21_11585 PF01985 CRS1 / YhbY (CRM) domain NUG21_11590 PF04430 Protein of unknown function (DUF498/DUF598) NUG21_11595 PF01476 LysM domain NUG21_11595 PF01551 Peptidase family M23 NUG21_11600 PF09335 SNARE associated Golgi protein NUG21_11610 PF01975 Survival protein SurE NUG21_11615 PF01713 Smr domain NUG21_11620 PF01142 tRNA pseudouridine synthase D (TruD) NUG21_11625 PF02542 YgbB family NUG21_11635 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NUG21_11640 PF04977 Septum formation initiator NUG21_11645 PF00113 Enolase, C-terminal TIM barrel domain NUG21_11645 PF03952 Enolase, N-terminal domain NUG21_11655 PF00793 DAHP synthetase I family NUG21_11665 PF06418 CTP synthase N-terminus NUG21_11665 PF00117 Glutamine amidotransferase class-I NUG21_11675 PF00204 DNA gyrase B NUG21_11675 PF00986 DNA gyrase B subunit, carboxyl terminus NUG21_11675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUG21_11675 PF01751 Toprim domain NUG21_11680 PF02611 CDP-diacylglycerol pyrophosphatase NUG21_11690 PF01384 Phosphate transporter family NUG21_11700 PF00571 CBS domain NUG21_11700 PF03471 Transporter associated domain NUG21_11700 PF01595 Cyclin M transmembrane N-terminal domain NUG21_11715 PF00296 Luciferase-like monooxygenase NUG21_11725 PF00581 Rhodanese-like domain NUG21_11725 PF17773 UPF0176 acylphosphatase like domain NUG21_11735 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NUG21_11745 PF13426 PAS domain NUG21_11745 PF05231 MASE1 NUG21_11745 PF00990 Diguanylate cyclase, GGDEF domain NUG21_11745 PF08448 PAS fold NUG21_11745 PF00563 EAL domain NUG21_11745 PF08447 PAS fold NUG21_11750 PF13673 Acetyltransferase (GNAT) domain NUG21_11755 PF01645 Conserved region in glutamate synthase NUG21_11760 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NUG21_11760 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NUG21_11760 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NUG21_11775 PF00356 Bacterial regulatory proteins, lacI family NUG21_11780 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NUG21_11780 PF05524 PEP-utilising enzyme, N-terminal NUG21_11780 PF00391 PEP-utilising enzyme, mobile domain NUG21_11780 PF02896 PEP-utilising enzyme, TIM barrel domain NUG21_11780 PF00381 PTS HPr component phosphorylation site NUG21_11785 PF00294 pfkB family carbohydrate kinase NUG21_11790 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NUG21_11800 PF00486 Transcriptional regulatory protein, C terminal NUG21_11800 PF00072 Response regulator receiver domain NUG21_11805 PF00512 His Kinase A (phospho-acceptor) domain NUG21_11805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUG21_11820 PF00005 ABC transporter NUG21_11820 PF02687 FtsX-like permease family NUG21_11820 PF12704 MacB-like periplasmic core domain NUG21_11860 PF00550 Phosphopantetheine attachment site NUG21_11865 PF00109 Beta-ketoacyl synthase, N-terminal domain NUG21_11865 PF02801 Beta-ketoacyl synthase, C-terminal domain NUG21_11870 PF00202 Aminotransferase class-III NUG21_11880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUG21_11880 PF03466 LysR substrate binding domain NUG21_11885 PF13460 NAD(P)H-binding NUG21_11890 PF00440 Bacterial regulatory proteins, tetR family NUG21_11895 PF07690 Major Facilitator Superfamily NUG21_11940 PF06969 HemN C-terminal domain NUG21_11940 PF04055 Radical SAM superfamily NUG21_11955 PF13746 4Fe-4S dicluster domain NUG21_11955 PF12801 4Fe-4S binding domain NUG21_11955 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase NUG21_11985 PF07715 TonB-dependent Receptor Plug Domain NUG21_11985 PF00593 TonB dependent receptor NUG21_12015 PF10947 Protein of unknown function (DUF2628) NUG21_12020 PF00593 TonB dependent receptor NUG21_12020 PF07715 TonB-dependent Receptor Plug Domain NUG21_12035 PF01566 Natural resistance-associated macrophage protein NUG21_12045 PF02954 Bacterial regulatory protein, Fis family NUG21_12045 PF00072 Response regulator receiver domain NUG21_12045 PF00158 Sigma-54 interaction domain NUG21_12050 PF08003 Protein of unknown function (DUF1698) NUG21_12080 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NUG21_12080 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NUG21_12085 PF08240 Alcohol dehydrogenase GroES-like domain NUG21_12085 PF00107 Zinc-binding dehydrogenase NUG21_12090 PF16363 GDP-mannose 4,6 dehydratase NUG21_12095 PF01370 NAD dependent epimerase/dehydratase family NUG21_12100 PF16363 GDP-mannose 4,6 dehydratase NUG21_12110 PF01066 CDP-alcohol phosphatidyltransferase NUG21_12115 PF08459 UvrC Helix-hairpin-helix N-terminal NUG21_12115 PF01541 GIY-YIG catalytic domain NUG21_12115 PF02151 UvrB/uvrC motif NUG21_12125 PF01451 Low molecular weight phosphotyrosine protein phosphatase NUG21_12130 PF02348 Cytidylyltransferase NUG21_12135 PF07715 TonB-dependent Receptor Plug Domain NUG21_12135 PF07660 Secretin and TonB N terminus short domain NUG21_12135 PF00593 TonB dependent receptor NUG21_12140 PF02606 Tetraacyldisaccharide-1-P 4'-kinase NUG21_12145 PF00005 ABC transporter NUG21_12145 PF00664 ABC transporter transmembrane region NUG21_12150 PF02472 Biopolymer transport protein ExbD/TolR NUG21_12155 PF01618 MotA/TolQ/ExbB proton channel family NUG21_12160 PF03772 Competence protein NUG21_12160 PF00753 Metallo-beta-lactamase superfamily NUG21_12170 PF00005 ABC transporter NUG21_12175 PF02687 FtsX-like permease family NUG21_12175 PF12704 MacB-like periplasmic core domain NUG21_12185 PF03937 Flavinator of succinate dehydrogenase NUG21_12190 PF13237 4Fe-4S dicluster domain NUG21_12190 PF13085 2Fe-2S iron-sulfur cluster binding domain NUG21_12195 PF02910 Fumarate reductase flavoprotein C-term NUG21_12195 PF00890 FAD binding domain NUG21_12200 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NUG21_12205 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NUG21_12215 PF01571 Aminomethyltransferase folate-binding domain NUG21_12220 PF00005 ABC transporter NUG21_12220 PF08402 TOBE domain NUG21_12225 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain NUG21_12225 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain NUG21_12230 PF02685 Glucokinase NUG21_12235 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NUG21_12240 PF00920 Dehydratase family NUG21_12245 PF01081 KDPG and KHG aldolase NUG21_12255 PF00528 Binding-protein-dependent transport system inner membrane component NUG21_12260 PF00528 Binding-protein-dependent transport system inner membrane component NUG21_12265 PF13416 Bacterial extracellular solute-binding protein NUG21_12280 PF00356 Bacterial regulatory proteins, lacI family NUG21_12290 PF03795 YCII-related domain NUG21_12295 PF02616 Segregation and condensation protein ScpA NUG21_12300 PF04079 Segregation and condensation complex subunit ScpB NUG21_12305 PF00849 RNA pseudouridylate synthase NUG21_12305 PF01479 S4 domain NUG21_12325 PF00795 Carbon-nitrogen hydrolase NUG21_12335 PF00155 Aminotransferase class I and II NUG21_12340 PF00005 ABC transporter NUG21_12345 PF03379 CcmB protein NUG21_12350 PF01578 Cytochrome C assembly protein NUG21_12360 PF03100 CcmE NUG21_12365 PF01578 Cytochrome C assembly protein NUG21_12365 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal NUG21_12370 PF08534 Redoxin NUG21_12375 PF03918 Cytochrome C biogenesis protein NUG21_12385 PF00561 alpha/beta hydrolase fold NUG21_12390 PF00082 Subtilase family NUG21_12390 PF01483 Proprotein convertase P-domain NUG21_12395 PF00005 ABC transporter NUG21_12395 PF00664 ABC transporter transmembrane region NUG21_12400 PF00005 ABC transporter NUG21_12400 PF00664 ABC transporter transmembrane region NUG21_12405 PF01654 Cytochrome bd terminal oxidase subunit I NUG21_12410 PF02322 Cytochrome bd terminal oxidase subunit II NUG21_12430 PF00529 HlyD membrane-fusion protein of T1SS NUG21_12435 PF00664 ABC transporter transmembrane region NUG21_12435 PF00005 ABC transporter NUG21_12435 PF03412 Peptidase C39 family NUG21_12455 PF02129 X-Pro dipeptidyl-peptidase (S15 family) NUG21_12455 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain NUG21_12460 PF00171 Aldehyde dehydrogenase family NUG21_12465 PF00696 Amino acid kinase family NUG21_12465 PF01472 PUA domain NUG21_12475 PF00206 Lyase NUG21_12480 PF01118 Semialdehyde dehydrogenase, NAD binding domain NUG21_12490 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase NUG21_12490 PF00696 Amino acid kinase family NUG21_12495 PF01546 Peptidase family M20/M25/M40 NUG21_12495 PF07687 Peptidase dimerisation domain NUG21_12505 PF00764 Arginosuccinate synthase NUG21_12510 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NUG21_12510 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NUG21_12520 PF01406 tRNA synthetases class I (C) catalytic domain NUG21_12520 PF09190 DALR domain NUG21_12525 PF02657 Fe-S metabolism associated domain NUG21_12550 PF01258 Prokaryotic dksA/traR C4-type zinc finger NUG21_12555 PF01809 Putative membrane protein insertion efficiency factor NUG21_12560 PF01979 Amidohydrolase family NUG21_12565 PF01551 Peptidase family M23 NUG21_12565 PF08460 Bacterial SH3 domain NUG21_12575 PF07694 5TMR of 5TMR-LYT NUG21_12575 PF00990 Diguanylate cyclase, GGDEF domain NUG21_12580 PF01095 Pectinesterase NUG21_12590 PF13419 Haloacid dehalogenase-like hydrolase NUG21_12600 PF01979 Amidohydrolase family NUG21_12605 PF06736 Protein of unknown function (DUF1211) NUG21_12610 PF01132 Elongation factor P (EF-P) OB domain NUG21_12610 PF09285 Elongation factor P, C-terminal NUG21_12610 PF08207 Elongation factor P (EF-P) KOW-like domain NUG21_12615 PF04055 Radical SAM superfamily NUG21_12620 PF03707 Bacterial signalling protein N terminal repeat NUG21_12620 PF00990 Diguanylate cyclase, GGDEF domain NUG21_12620 PF00563 EAL domain NUG21_12630 PF00588 SpoU rRNA Methylase family NUG21_12635 PF00459 Inositol monophosphatase family NUG21_12655 PF07715 TonB-dependent Receptor Plug Domain NUG21_12670 PF02203 Tar ligand binding domain homologue NUG21_12670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUG21_12670 PF00672 HAMP domain NUG21_12675 PF07549 SecD/SecF GG Motif NUG21_12675 PF02355 Protein export membrane protein NUG21_12680 PF07549 SecD/SecF GG Motif NUG21_12680 PF13721 SecD export protein N-terminal TM region NUG21_12680 PF02355 Protein export membrane protein NUG21_12685 PF02699 Preprotein translocase subunit NUG21_12690 PF01702 Queuine tRNA-ribosyltransferase NUG21_12695 PF00664 ABC transporter transmembrane region NUG21_12695 PF00005 ABC transporter NUG21_12700 PF00144 Beta-lactamase NUG21_12710 PF03812 2-keto-3-deoxygluconate permease NUG21_12720 PF00072 Response regulator receiver domain NUG21_12720 PF00990 Diguanylate cyclase, GGDEF domain NUG21_12725 PF00849 RNA pseudouridylate synthase NUG21_12725 PF01479 S4 domain NUG21_12730 PF03880 DbpA RNA binding domain NUG21_12730 PF00270 DEAD/DEAH box helicase NUG21_12730 PF00271 Helicase conserved C-terminal domain NUG21_12745 PF01494 FAD binding domain NUG21_12770 PF12833 Helix-turn-helix domain NUG21_12770 PF00730 HhH-GPD superfamily base excision DNA repair protein NUG21_12770 PF02805 Metal binding domain of Ada NUG21_12770 PF06029 AlkA N-terminal domain NUG21_12775 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NUG21_12775 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NUG21_12785 PF00654 Voltage gated chloride channel NUG21_12800 PF00593 TonB dependent receptor NUG21_12800 PF07715 TonB-dependent Receptor Plug Domain NUG21_12805 PF00893 Small Multidrug Resistance protein NUG21_12815 PF00111 2Fe-2S iron-sulfur cluster binding domain NUG21_12815 PF01799 [2Fe-2S] binding domain NUG21_12815 PF10518 TAT (twin-arginine translocation) pathway signal sequence NUG21_12820 PF03450 CO dehydrogenase flavoprotein C-terminal domain NUG21_12820 PF00941 FAD binding domain in molybdopterin dehydrogenase NUG21_12825 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NUG21_12825 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NUG21_12830 PF12804 MobA-like NTP transferase domain NUG21_12835 PF13478 XdhC Rossmann domain NUG21_12835 PF02625 XdhC and CoxI family NUG21_12840 PF06224 Winged helix DNA-binding domain NUG21_12850 PF06580 Histidine kinase NUG21_12850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUG21_12850 PF07694 5TMR of 5TMR-LYT NUG21_12855 PF04397 LytTr DNA-binding domain NUG21_12855 PF00072 Response regulator receiver domain NUG21_12865 PF01137 RNA 3'-terminal phosphate cyclase NUG21_12865 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain NUG21_12870 PF01139 tRNA-splicing ligase RtcB NUG21_12885 PF06956 Regulator of RNA terminal phosphate cyclase NUG21_12885 PF00158 Sigma-54 interaction domain NUG21_12890 PF01475 Ferric uptake regulator family NUG21_12895 PF00749 tRNA synthetases class I (E and Q), catalytic domain NUG21_12915 PF06123 Inner membrane protein CreD NUG21_12920 PF00512 His Kinase A (phospho-acceptor) domain NUG21_12920 PF00672 HAMP domain NUG21_12920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUG21_12925 PF00072 Response regulator receiver domain NUG21_12925 PF00486 Transcriptional regulatory protein, C terminal NUG21_12935 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ NUG21_12940 PF09234 Domain of unknown function (DUF1963) NUG21_12950 PF17757 UvrB interaction domain NUG21_12950 PF02559 CarD-like/TRCF domain NUG21_12950 PF00270 DEAD/DEAH box helicase NUG21_12950 PF00271 Helicase conserved C-terminal domain NUG21_12950 PF03461 TRCF domain NUG21_12960 PF01627 Hpt domain NUG21_12960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUG21_12960 PF01584 CheW-like domain NUG21_12960 PF02895 Signal transducing histidine kinase, homodimeric domain NUG21_12975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUG21_12975 PF00672 HAMP domain NUG21_12975 PF12729 Four helix bundle sensory module for signal transduction NUG21_12980 PF01584 CheW-like domain NUG21_12985 PF03707 Bacterial signalling protein N terminal repeat NUG21_12985 PF00563 EAL domain NUG21_12985 PF00990 Diguanylate cyclase, GGDEF domain NUG21_12990 PF01739 CheR methyltransferase, SAM binding domain NUG21_12990 PF03705 CheR methyltransferase, all-alpha domain NUG21_12995 PF01339 CheB methylesterase NUG21_12995 PF00072 Response regulator receiver domain NUG21_13000 PF02311 AraC-like ligand binding domain NUG21_13000 PF12833 Helix-turn-helix domain NUG21_13010 PF07944 Beta-L-arabinofuranosidase, GH127 NUG21_13020 PF00300 Histidine phosphatase superfamily (branch 1) NUG21_13025 PF04493 Endonuclease V NUG21_13035 PF02678 Pirin NUG21_13035 PF05726 Pirin C-terminal cupin domain NUG21_13050 PF02554 Carbon starvation protein CstA NUG21_13050 PF13722 5TM C-terminal transporter carbon starvation CstA NUG21_13055 PF04328 Selenoprotein, putative NUG21_13060 PF13419 Haloacid dehalogenase-like hydrolase NUG21_13090 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region NUG21_13090 PF07676 WD40-like Beta Propeller Repeat NUG21_13090 PF00326 Prolyl oligopeptidase family NUG21_13095 PF03169 OPT oligopeptide transporter protein NUG21_13100 PF00854 POT family NUG21_13120 PF00356 Bacterial regulatory proteins, lacI family NUG21_13130 PF03825 Nucleoside H+ symporter NUG21_13135 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NUG21_13135 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NUG21_13160 PF00732 GMC oxidoreductase NUG21_13160 PF05199 GMC oxidoreductase NUG21_13170 PF00436 Single-strand binding protein family NUG21_13175 PF00348 Polyprenyl synthetase NUG21_13185 PF08245 Mur ligase middle domain NUG21_13200 PF00696 Amino acid kinase family NUG21_13200 PF01842 ACT domain NUG21_13210 PF02567 Phenazine biosynthesis-like protein NUG21_13220 PF02566 OsmC-like protein NUG21_13230 PF04391 Protein of unknown function (DUF533) NUG21_13235 PF01476 LysM domain NUG21_13235 PF08525 Opacity-associated protein A N-terminal motif NUG21_13235 PF01551 Peptidase family M23 NUG21_13250 PF01965 DJ-1/PfpI family NUG21_13265 PF01458 Uncharacterized protein family (UPF0051) NUG21_13270 PF00005 ABC transporter NUG21_13275 PF01458 Uncharacterized protein family (UPF0051) NUG21_13280 PF00266 Aminotransferase class-V NUG21_13290 PF00355 Rieske [2Fe-2S] domain NUG21_13295 PF00672 HAMP domain NUG21_13295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUG21_13295 PF02203 Tar ligand binding domain homologue NUG21_13305 PF00759 Glycosyl hydrolase family 9 NUG21_13305 PF02927 Cellulase N-terminal ig-like domain NUG21_13310 PF00753 Metallo-beta-lactamase superfamily NUG21_13320 PF00037 4Fe-4S binding domain NUG21_13330 PF01467 Cytidylyltransferase-like NUG21_13340 PF00183 Hsp90 protein NUG21_13340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUG21_13345 PF02615 Malate/L-lactate dehydrogenase NUG21_13350 PF00593 TonB dependent receptor NUG21_13350 PF07715 TonB-dependent Receptor Plug Domain NUG21_13365 PF04616 Glycosyl hydrolases family 43 NUG21_13370 PF07532 Bacterial Ig-like domain (group 4) NUG21_13375 PF00593 TonB dependent receptor NUG21_13375 PF07715 TonB-dependent Receptor Plug Domain NUG21_13395 PF13520 Amino acid permease NUG21_13410 PF00557 Metallopeptidase family M24 NUG21_13410 PF01321 Creatinase/Prolidase N-terminal domain NUG21_13415 PF00171 Aldehyde dehydrogenase family NUG21_13420 PF00701 Dihydrodipicolinate synthetase family NUG21_13425 PF17806 Sarcosine oxidase A3 domain NUG21_13425 PF07992 Pyridine nucleotide-disulphide oxidoreductase NUG21_13435 PF01266 FAD dependent oxidoreductase NUG21_13440 PF05544 Proline racemase NUG21_13450 PF00448 SRP54-type protein, GTPase domain NUG21_13450 PF02881 SRP54-type protein, helical bundle domain NUG21_13455 PF00633 Helix-hairpin-helix motif NUG21_13455 PF14815 NUDIX domain NUG21_13455 PF00730 HhH-GPD superfamily base excision DNA repair protein NUG21_13460 PF04362 Bacterial Fe(2+) trafficking NUG21_13480 PF01612 3'-5' exonuclease NUG21_13480 PF00570 HRDC domain NUG21_13500 PF01584 CheW-like domain NUG21_13505 PF00672 HAMP domain NUG21_13505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUG21_13505 PF17202 Single cache domain 3 NUG21_13510 PF00672 HAMP domain NUG21_13510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUG21_13515 PF00270 DEAD/DEAH box helicase NUG21_13515 PF08494 DEAD/H associated NUG21_13515 PF00271 Helicase conserved C-terminal domain NUG21_13525 PF00563 EAL domain NUG21_13525 PF13188 PAS domain NUG21_13525 PF03707 Bacterial signalling protein N terminal repeat NUG21_13525 PF00990 Diguanylate cyclase, GGDEF domain NUG21_13530 PF03725 3' exoribonuclease family, domain 2 NUG21_13530 PF01138 3' exoribonuclease family, domain 1 NUG21_13530 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain NUG21_13530 PF00013 KH domain NUG21_13530 PF00575 S1 RNA binding domain NUG21_13535 PF00312 Ribosomal protein S15 NUG21_13540 PF16198 tRNA pseudouridylate synthase B C-terminal domain NUG21_13540 PF09157 Pseudouridine synthase II TruB, C-terminal NUG21_13540 PF01509 TruB family pseudouridylate synthase (N terminal domain) NUG21_13545 PF02033 Ribosome-binding factor A NUG21_13550 PF08364 Bacterial translation initiation factor IF-2 associated region NUG21_13550 PF00009 Elongation factor Tu GTP binding domain NUG21_13550 PF11987 Translation-initiation factor 2 NUG21_13550 PF04760 Translation initiation factor IF-2, N-terminal region NUG21_13555 PF08529 NusA N-terminal domain NUG21_13555 PF00575 S1 RNA binding domain NUG21_13555 PF13184 NusA-like KH domain NUG21_13560 PF17384 RimP C-terminal SH3 domain NUG21_13560 PF02576 RimP N-terminal domain NUG21_13570 PF00361 Proton-conducting membrane transporter NUG21_13575 PF00361 Proton-conducting membrane transporter NUG21_13575 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus NUG21_13580 PF00361 Proton-conducting membrane transporter NUG21_13580 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NUG21_13585 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NUG21_13590 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 NUG21_13595 PF12838 4Fe-4S dicluster domain NUG21_13600 PF00146 NADH dehydrogenase NUG21_13605 PF00384 Molybdopterin oxidoreductase NUG21_13605 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NUG21_13605 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal NUG21_13610 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region NUG21_13610 PF10531 SLBB domain NUG21_13610 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NUG21_13620 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NUG21_13625 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit NUG21_13630 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit NUG21_13635 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 NUG21_13650 PF00121 Triosephosphate isomerase NUG21_13670 PF00563 EAL domain NUG21_13670 PF00990 Diguanylate cyclase, GGDEF domain NUG21_13670 PF03707 Bacterial signalling protein N terminal repeat NUG21_13685 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NUG21_13685 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NUG21_13685 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NUG21_13685 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NUG21_13690 PF01039 Carboxyl transferase domain NUG21_13690 PF17848 Acetyl-coA carboxylase zinc finger domain NUG21_13695 PF00290 Tryptophan synthase alpha chain NUG21_13700 PF00291 Pyridoxal-phosphate dependent enzyme NUG21_13705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUG21_13705 PF03466 LysR substrate binding domain NUG21_13710 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase NUG21_13715 PF01416 tRNA pseudouridine synthase NUG21_13725 PF01118 Semialdehyde dehydrogenase, NAD binding domain NUG21_13725 PF02774 Semialdehyde dehydrogenase, dimerisation domain NUG21_13730 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NUG21_13730 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NUG21_13735 PF01264 Chorismate synthase NUG21_13740 PF05175 Methyltransferase small domain NUG21_13745 PF02630 SCO1/SenC NUG21_13750 PF02666 Phosphatidylserine decarboxylase NUG21_13755 PF06737 Transglycosylase-like domain NUG21_13760 PF05872 Bacterial protein of unknown function (DUF853) NUG21_13770 PF00293 NUDIX domain NUG21_13785 PF01272 Transcription elongation factor, GreA/GreB, C-term NUG21_13785 PF03449 Transcription elongation factor, N-terminal NUG21_13790 PF04055 Radical SAM superfamily NUG21_13790 PF18693 TRAM domain NUG21_13790 PF00919 Uncharacterized protein family UPF0004 NUG21_13795 PF00144 Beta-lactamase NUG21_13800 PF01738 Dienelactone hydrolase family NUG21_13815 PF06271 RDD family NUG21_13820 PF00692 dUTPase NUG21_13825 PF10609 NUBPL iron-transfer P-loop NTPase NUG21_13830 PF07715 TonB-dependent Receptor Plug Domain NUG21_13830 PF00593 TonB dependent receptor NUG21_13840 PF13181 Tetratricopeptide repeat NUG21_13845 PF07715 TonB-dependent Receptor Plug Domain NUG21_13845 PF00593 TonB dependent receptor NUG21_13860 PF01431 Peptidase family M13 NUG21_13860 PF05649 Peptidase family M13 NUG21_13885 PF07992 Pyridine nucleotide-disulphide oxidoreductase NUG21_13885 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NUG21_13890 PF04235 Protein of unknown function (DUF418) NUG21_13895 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NUG21_13900 PF00877 NlpC/P60 family NUG21_13905 PF00877 NlpC/P60 family NUG21_13915 PF03061 Thioesterase superfamily NUG21_13920 PF08241 Methyltransferase domain NUG21_13925 PF00375 Sodium:dicarboxylate symporter family NUG21_13930 PF00245 Alkaline phosphatase NUG21_13940 PF09179 TilS substrate binding domain NUG21_13940 PF11734 TilS substrate C-terminal domain NUG21_13940 PF01171 PP-loop family NUG21_13945 PF02609 Exonuclease VII small subunit NUG21_13950 PF00348 Polyprenyl synthetase NUG21_13955 PF14521 Lysine-specific metallo-endopeptidase NUG21_13970 PF01523 Putative modulator of DNA gyrase NUG21_13975 PF04751 Protein of unknown function (DUF615) NUG21_13980 PF01523 Putative modulator of DNA gyrase NUG21_13990 PF00575 S1 RNA binding domain NUG21_13990 PF10150 Ribonuclease E/G family NUG21_13995 PF02545 Maf-like protein NUG21_14000 PF04402 Protein of unknown function (DUF541) NUG21_14010 PF07715 TonB-dependent Receptor Plug Domain NUG21_14010 PF00593 TonB dependent receptor NUG21_14015 PF02590 Predicted SPOUT methyltransferase NUG21_14030 PF01467 Cytidylyltransferase-like NUG21_14045 PF13603 Leucyl-tRNA synthetase, Domain 2 NUG21_14045 PF08264 Anticodon-binding domain of tRNA NUG21_14045 PF00133 tRNA synthetases class I (I, L, M and V) NUG21_14055 PF00085 Thioredoxin NUG21_14065 PF00563 EAL domain NUG21_14065 PF01590 GAF domain NUG21_14065 PF00990 Diguanylate cyclase, GGDEF domain NUG21_14065 PF00360 Phytochrome region NUG21_14080 PF02592 Putative vitamin uptake transporter NUG21_14090 PF02574 Homocysteine S-methyltransferase NUG21_14095 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NUG21_14105 PF01588 Putative tRNA binding domain NUG21_14105 PF09334 tRNA synthetases class I (M) NUG21_14120 PF04060 Putative Fe-S cluster NUG21_14135 PF04542 Sigma-70 region 2 NUG21_14135 PF04545 Sigma-70, region 4 NUG21_14180 PF01042 Endoribonuclease L-PSP NUG21_14190 PF03706 Lysylphosphatidylglycerol synthase TM region NUG21_14225 PF07690 Major Facilitator Superfamily NUG21_14230 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NUG21_14235 PF03831 PhnA domain NUG21_14235 PF08274 PhnA Zinc-Ribbon NUG21_14245 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NUG21_14265 PF00563 EAL domain NUG21_14265 PF03707 Bacterial signalling protein N terminal repeat NUG21_14265 PF00990 Diguanylate cyclase, GGDEF domain NUG21_14280 PF01258 Prokaryotic dksA/traR C4-type zinc finger NUG21_14290 PF01863 Protein of unknown function DUF45 NUG21_14295 PF00849 RNA pseudouridylate synthase NUG21_14295 PF01479 S4 domain NUG21_14305 PF13360 PQQ-like domain NUG21_14320 PF07043 Protein of unknown function (DUF1328) NUG21_14355 PF02310 B12 binding domain NUG21_14355 PF01642 Methylmalonyl-CoA mutase NUG21_14365 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NUG21_14365 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NUG21_14370 PF03797 Autotransporter beta-domain NUG21_14370 PF12951 Passenger-associated-transport-repeat NUG21_14370 PF00082 Subtilase family NUG21_14375 PF02803 Thiolase, C-terminal domain NUG21_14375 PF00108 Thiolase, N-terminal domain NUG21_14390 PF00990 Diguanylate cyclase, GGDEF domain NUG21_14390 PF00072 Response regulator receiver domain NUG21_14405 PF18158 Adaptive response protein AidB N-terminal domain NUG21_14405 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NUG21_14405 PF02770 Acyl-CoA dehydrogenase, middle domain NUG21_14410 PF01068 ATP dependent DNA ligase domain NUG21_14410 PF04675 DNA ligase N terminus NUG21_14410 PF04679 ATP dependent DNA ligase C terminal region NUG21_14415 PF01068 ATP dependent DNA ligase domain NUG21_14415 PF04675 DNA ligase N terminus NUG21_14415 PF04679 ATP dependent DNA ligase C terminal region NUG21_14420 PF00271 Helicase conserved C-terminal domain NUG21_14420 PF00270 DEAD/DEAH box helicase NUG21_14420 PF08494 DEAD/H associated NUG21_14430 PF01494 FAD binding domain NUG21_14435 PF00313 'Cold-shock' DNA-binding domain NUG21_14440 PF01048 Phosphorylase superfamily NUG21_14445 PF00156 Phosphoribosyl transferase domain NUG21_14450 PF00933 Glycosyl hydrolase family 3 N terminal domain NUG21_14460 PF01928 CYTH domain NUG21_14465 PF05958 tRNA (Uracil-5-)-methyltransferase NUG21_14470 PF00072 Response regulator receiver domain NUG21_14470 PF00486 Transcriptional regulatory protein, C terminal NUG21_14475 PF02565 Recombination protein O C terminal NUG21_14475 PF11967 Recombination protein O N terminal NUG21_14480 PF07650 KH domain NUG21_14480 PF01926 50S ribosome-binding GTPase NUG21_14485 PF14622 Ribonuclease-III-like NUG21_14485 PF00035 Double-stranded RNA binding motif NUG21_14495 PF10502 Signal peptidase, peptidase S26 NUG21_14500 PF03144 Elongation factor Tu domain 2 NUG21_14500 PF06421 GTP-binding protein LepA C-terminus NUG21_14500 PF00679 Elongation factor G C-terminus NUG21_14500 PF00009 Elongation factor Tu GTP binding domain NUG21_14505 PF13180 PDZ domain NUG21_14515 PF04542 Sigma-70 region 2 NUG21_14515 PF08281 Sigma-70, region 4 NUG21_14520 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NUG21_14520 PF00378 Enoyl-CoA hydratase/isomerase NUG21_14520 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NUG21_14525 PF01545 Cation efflux family NUG21_14530 PF13823 Alcohol dehydrogenase GroES-associated NUG21_14530 PF08240 Alcohol dehydrogenase GroES-like domain NUG21_14530 PF00107 Zinc-binding dehydrogenase NUG21_14545 PF00106 short chain dehydrogenase NUG21_14550 PF03601 Conserved hypothetical protein 698 NUG21_14555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUG21_14555 PF03466 LysR substrate binding domain NUG21_14565 PF07745 Glycosyl hydrolase family 53 NUG21_14570 PF00703 Glycosyl hydrolases family 2 NUG21_14570 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 NUG21_14570 PF16355 Domain of unknown function (DUF4982) NUG21_14570 PF02837 Glycosyl hydrolases family 2, sugar binding domain NUG21_14570 PF02836 Glycosyl hydrolases family 2, TIM barrel domain NUG21_14600 PF05114 Protein of unknown function (DUF692) NUG21_14610 PF02666 Phosphatidylserine decarboxylase NUG21_14615 PF05190 MutS family domain IV NUG21_14615 PF00488 MutS domain V NUG21_14615 PF01624 MutS domain I NUG21_14615 PF05192 MutS domain III NUG21_14615 PF05188 MutS domain II NUG21_14630 PF17871 AAA lid domain NUG21_14630 PF10431 C-terminal, D2-small domain, of ClpB protein NUG21_14630 PF02861 Clp amino terminal domain, pathogenicity island component NUG21_14630 PF07724 AAA domain (Cdc48 subfamily) NUG21_14630 PF00004 ATPase family associated with various cellular activities (AAA) NUG21_14635 PF00141 Peroxidase NUG21_14640 PF01479 S4 domain NUG21_14645 PF01554 MatE NUG21_14650 PF01245 Ribosomal protein L19 NUG21_14655 PF01746 tRNA (Guanine-1)-methyltransferase NUG21_14660 PF01782 RimM N-terminal domain NUG21_14660 PF05239 PRC-barrel domain NUG21_14665 PF00886 Ribosomal protein S16 NUG21_14675 PF03060 Nitronate monooxygenase NUG21_14680 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) NUG21_14685 PF00448 SRP54-type protein, GTPase domain NUG21_14685 PF02881 SRP54-type protein, helical bundle domain NUG21_14685 PF02978 Signal peptide binding domain NUG21_14690 PF01578 Cytochrome C assembly protein NUG21_14695 PF01263 Aldose 1-epimerase NUG21_14700 PF06964 Alpha-L-arabinofuranosidase C-terminal domain NUG21_14710 PF03144 Elongation factor Tu domain 2 NUG21_14710 PF03764 Elongation factor G, domain IV NUG21_14710 PF14492 Elongation Factor G, domain II NUG21_14710 PF00679 Elongation factor G C-terminus NUG21_14710 PF00009 Elongation factor Tu GTP binding domain NUG21_14715 PF13229 Right handed beta helix region NUG21_14715 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) NUG21_14715 PF12708 Pectate lyase superfamily protein NUG21_14725 PF00999 Sodium/hydrogen exchanger family NUG21_14745 PF00043 Glutathione S-transferase, C-terminal domain NUG21_14745 PF13417 Glutathione S-transferase, N-terminal domain NUG21_14750 PF02653 Branched-chain amino acid transport system / permease component NUG21_14755 PF02653 Branched-chain amino acid transport system / permease component NUG21_14760 PF00005 ABC transporter NUG21_14765 PF13407 Periplasmic binding protein domain NUG21_14770 PF00171 Aldehyde dehydrogenase family NUG21_14780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUG21_14780 PF03466 LysR substrate binding domain NUG21_14790 PF00920 Dehydratase family NUG21_14795 PF04542 Sigma-70 region 2 NUG21_14795 PF08281 Sigma-70, region 4 NUG21_14810 PF00328 Histidine phosphatase superfamily (branch 2) NUG21_14820 PF18073 Rubredoxin metal binding domain NUG21_14840 PF03626 Prokaryotic Cytochrome C oxidase subunit IV NUG21_14845 PF00510 Cytochrome c oxidase subunit III NUG21_14850 PF00115 Cytochrome C and Quinol oxidase polypeptide I NUG21_14855 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NUG21_14855 PF06481 COX Aromatic Rich Motif NUG21_14875 PF02401 LytB protein NUG21_14880 PF01252 Signal peptidase (SPase) II NUG21_14885 PF06827 Zinc finger found in FPG and IleRS NUG21_14885 PF00133 tRNA synthetases class I (I, L, M and V) NUG21_14885 PF08264 Anticodon-binding domain of tRNA NUG21_14890 PF06574 FAD synthetase NUG21_14890 PF01687 Riboflavin kinase NUG21_14895 PF03023 Lipid II flippase MurJ NUG21_14900 PF01649 Ribosomal protein S20 NUG21_14905 PF01926 50S ribosome-binding GTPase NUG21_14905 PF01018 GTP1/OBG NUG21_14910 PF01016 Ribosomal L27 protein NUG21_14915 PF00829 Ribosomal prokaryotic L21 protein NUG21_14920 PF17755 UvrA DNA-binding domain NUG21_14920 PF17760 UvrA interaction domain NUG21_14920 PF00005 ABC transporter NUG21_14935 PF00378 Enoyl-CoA hydratase/isomerase NUG21_14955 PF04377 Arginine-tRNA-protein transferase, C terminus NUG21_14955 PF04376 Arginine-tRNA-protein transferase, N terminus NUG21_14970 PF08447 PAS fold NUG21_14970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUG21_14990 PF02222 ATP-grasp domain NUG21_14990 PF01370 NAD dependent epimerase/dehydratase family NUG21_14995 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NUG21_14995 PF00355 Rieske [2Fe-2S] domain NUG21_15035 PF01636 Phosphotransferase enzyme family NUG21_15060 PF00196 Bacterial regulatory proteins, luxR family NUG21_15060 PF00072 Response regulator receiver domain NUG21_15065 PF07730 Histidine kinase NUG21_15075 PF03775 Septum formation inhibitor MinC, C-terminal domain NUG21_15075 PF05209 Septum formation inhibitor MinC, N-terminal domain NUG21_15080 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NUG21_15085 PF03776 Septum formation topological specificity factor MinE NUG21_15095 PF00512 His Kinase A (phospho-acceptor) domain NUG21_15095 PF02702 Osmosensitive K+ channel His kinase sensor domain NUG21_15095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUG21_15095 PF13493 Domain of unknown function (DUF4118) NUG21_15100 PF00072 Response regulator receiver domain NUG21_15100 PF00486 Transcriptional regulatory protein, C terminal NUG21_15110 PF08019 Phosphoethanolamine transferase EptA/EptB NUG21_15110 PF00884 Sulfatase NUG21_15130 PF07690 Major Facilitator Superfamily NUG21_15135 PF02347 Glycine cleavage system P-protein NUG21_15140 PF06628 Catalase-related immune-responsive NUG21_15140 PF18011 C-terminal domain found in long catalases NUG21_15140 PF00199 Catalase NUG21_15145 PF08240 Alcohol dehydrogenase GroES-like domain NUG21_15145 PF13823 Alcohol dehydrogenase GroES-associated NUG21_15145 PF00107 Zinc-binding dehydrogenase NUG21_15175 PF17755 UvrA DNA-binding domain NUG21_15210 PF00990 Diguanylate cyclase, GGDEF domain NUG21_15220 PF00709 Adenylosuccinate synthetase NUG21_15230 PF01145 SPFH domain / Band 7 family NUG21_15235 PF01145 SPFH domain / Band 7 family NUG21_15235 PF12221 Bacterial membrane protein N terminal NUG21_15240 PF08240 Alcohol dehydrogenase GroES-like domain NUG21_15240 PF00107 Zinc-binding dehydrogenase NUG21_15245 PF00072 Response regulator receiver domain NUG21_15250 PF00226 DnaJ domain NUG21_15250 PF01556 DnaJ C terminal domain NUG21_15260 PF08534 Redoxin NUG21_15270 PF00905 Penicillin binding protein transpeptidase domain NUG21_15270 PF00912 Transglycosylase NUG21_15270 PF06832 Penicillin-Binding Protein C-terminus Family NUG21_15290 PF08220 DeoR-like helix-turn-helix domain NUG21_15290 PF00455 DeoR C terminal sensor domain NUG21_15300 PF07690 Major Facilitator Superfamily NUG21_15305 PF00207 Alpha-2-macroglobulin family NUG21_15305 PF07703 Alpha-2-macroglobulin bait region domain NUG21_15305 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain NUG21_15305 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain NUG21_15305 PF11974 Bacterial alpha-2-macroglobulin MG3 domain NUG21_15305 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain NUG21_15305 PF17962 Bacterial macroglobulin domain 6 NUG21_15305 PF01835 MG2 domain NUG21_15315 PF00593 TonB dependent receptor NUG21_15315 PF07715 TonB-dependent Receptor Plug Domain NUG21_15320 PF04303 PrpF protein NUG21_15330 PF00694 Aconitase C-terminal domain NUG21_15330 PF00330 Aconitase family (aconitate hydratase) NUG21_15335 PF00285 Citrate synthase, C-terminal domain NUG21_15355 PF00717 Peptidase S24-like NUG21_15355 PF01726 LexA DNA binding domain NUG21_15370 PF07733 Bacterial DNA polymerase III alpha NTPase domain NUG21_15370 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NUG21_15370 PF14579 Helix-hairpin-helix motif NUG21_15370 PF02811 PHP domain NUG21_15370 PF01336 OB-fold nucleic acid binding domain NUG21_15385 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NUG21_15385 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NUG21_15390 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system NUG21_15395 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system NUG21_15410 PF09115 DNA polymerase III, delta subunit, C terminal NUG21_15415 PF02223 Thymidylate kinase NUG21_15420 PF02618 YceG-like family NUG21_15425 PF04715 Anthranilate synthase component I, N terminal region NUG21_15425 PF00425 chorismate binding enzyme NUG21_15430 PF00109 Beta-ketoacyl synthase, N-terminal domain NUG21_15430 PF02801 Beta-ketoacyl synthase, C-terminal domain NUG21_15435 PF00550 Phosphopantetheine attachment site NUG21_15445 PF00698 Acyl transferase domain NUG21_15455 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NUG21_15455 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NUG21_15460 PF01783 Ribosomal L32p protein family NUG21_15465 PF02620 Large ribosomal RNA subunit accumulation protein YceD NUG21_15470 PF02545 Maf-like protein NUG21_15490 PF17863 AAA lid domain NUG21_15490 PF07726 ATPase family associated with various cellular activities (AAA) NUG21_15500 PF01841 Transglutaminase-like superfamily NUG21_15500 PF13559 Domain of unknown function (DUF4129) NUG21_15500 PF11992 Domain of unknown function (DUF3488) NUG21_15510 PF01230 HIT domain NUG21_15515 PF02132 RecR protein NUG21_15515 PF13662 Toprim domain NUG21_15520 PF02575 YbaB/EbfC DNA-binding family NUG21_15525 PF12169 DNA polymerase III subunits gamma and tau domain III NUG21_15525 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding NUG21_15525 PF12170 DNA polymerase III tau subunit V interacting with alpha NUG21_15540 PF02391 MoaE protein NUG21_15545 PF02597 ThiS family NUG21_15550 PF01967 MoaC family NUG21_15560 PF04055 Radical SAM superfamily NUG21_15560 PF06463 Molybdenum Cofactor Synthesis C NUG21_15575 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NUG21_15600 PF00929 Exonuclease NUG21_15605 PF00075 RNase H NUG21_15615 PF16123 Hydroxyacylglutathione hydrolase C-terminus NUG21_15615 PF00753 Metallo-beta-lactamase superfamily NUG21_15625 PF13145 PPIC-type PPIASE domain NUG21_15645 PF00216 Bacterial DNA-binding protein NUG21_15650 PF00004 ATPase family associated with various cellular activities (AAA) NUG21_15650 PF05362 Lon protease (S16) C-terminal proteolytic domain NUG21_15650 PF02190 ATP-dependent protease La (LON) substrate-binding domain NUG21_15655 PF10431 C-terminal, D2-small domain, of ClpB protein NUG21_15655 PF06689 ClpX C4-type zinc finger NUG21_15655 PF07724 AAA domain (Cdc48 subfamily) NUG21_15660 PF00574 Clp protease NUG21_15665 PF05697 Bacterial trigger factor protein (TF) NUG21_15665 PF05698 Bacterial trigger factor protein (TF) C-terminus NUG21_15720 PF00180 Isocitrate/isopropylmalate dehydrogenase NUG21_15720 PF18324 Hypothetical protein TT1725 NUG21_15730 PF00462 Glutaredoxin NUG21_15735 PF01435 Peptidase family M48 NUG21_15735 PF13181 Tetratricopeptide repeat NUG21_15740 PF00486 Transcriptional regulatory protein, C terminal NUG21_15740 PF00072 Response regulator receiver domain NUG21_15745 PF00512 His Kinase A (phospho-acceptor) domain NUG21_15745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUG21_15745 PF00989 PAS fold NUG21_15745 PF11808 Phosphate regulon sensor protein PhoR NUG21_15750 PF02503 Polyphosphate kinase middle domain NUG21_15750 PF13090 Polyphosphate kinase C-terminal domain 2 NUG21_15750 PF17941 Polyphosphate kinase C-terminal domain 1 NUG21_15750 PF13089 Polyphosphate kinase N-terminal domain NUG21_15755 PF02541 Ppx/GppA phosphatase family NUG21_15760 PF13439 Glycosyltransferase Family 4 NUG21_15760 PF00534 Glycosyl transferases group 1 NUG21_15765 PF01569 PAP2 superfamily NUG21_15770 PF00149 Calcineurin-like phosphoesterase NUG21_15785 PF04305 Protein of unknown function (DUF455) NUG21_15790 PF00156 Phosphoribosyl transferase domain NUG21_15805 PF02875 Mur ligase family, glutamate ligase domain NUG21_15805 PF08245 Mur ligase middle domain NUG21_15810 PF00300 Histidine phosphatase superfamily (branch 1) NUG21_15815 PF10459 Peptidase S46 NUG21_15820 PF08240 Alcohol dehydrogenase GroES-like domain NUG21_15820 PF00107 Zinc-binding dehydrogenase NUG21_15830 PF00005 ABC transporter NUG21_15830 PF12857 TOBE-like domain NUG21_15835 PF00528 Binding-protein-dependent transport system inner membrane component NUG21_15840 PF00528 Binding-protein-dependent transport system inner membrane component NUG21_15850 PF00155 Aminotransferase class I and II NUG21_15860 PF00849 RNA pseudouridylate synthase NUG21_15860 PF01479 S4 domain NUG21_15870 PF00691 OmpA family NUG21_15870 PF05736 OprF membrane domain NUG21_15875 PF03466 LysR substrate binding domain NUG21_15875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUG21_15880 PF07690 Major Facilitator Superfamily NUG21_15890 PF00248 Aldo/keto reductase family NUG21_15895 PF00107 Zinc-binding dehydrogenase NUG21_15895 PF08240 Alcohol dehydrogenase GroES-like domain NUG21_15900 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NUG21_15900 PF07992 Pyridine nucleotide-disulphide oxidoreductase NUG21_15920 PF03009 Glycerophosphoryl diester phosphodiesterase family NUG21_15940 PF00043 Glutathione S-transferase, C-terminal domain NUG21_15940 PF02798 Glutathione S-transferase, N-terminal domain NUG21_15945 PF00501 AMP-binding enzyme NUG21_15945 PF13193 AMP-binding enzyme C-terminal domain NUG21_15945 PF16177 Acetyl-coenzyme A synthetase N-terminus NUG21_15965 PF02798 Glutathione S-transferase, N-terminal domain NUG21_15965 PF00043 Glutathione S-transferase, C-terminal domain NUG21_15975 PF00056 lactate/malate dehydrogenase, NAD binding domain NUG21_15975 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NUG21_15985 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NUG21_15990 PF00679 Elongation factor G C-terminus NUG21_15990 PF00009 Elongation factor Tu GTP binding domain NUG21_15990 PF03144 Elongation factor Tu domain 2 NUG21_16010 PF01474 Class-II DAHP synthetase family NUG21_16025 PF02600 Disulfide bond formation protein DsbB NUG21_16030 PF01196 Ribosomal protein L17 NUG21_16035 PF01000 RNA polymerase Rpb3/RpoA insert domain NUG21_16035 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain NUG21_16035 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain NUG21_16040 PF00163 Ribosomal protein S4/S9 N-terminal domain NUG21_16040 PF01479 S4 domain NUG21_16045 PF00411 Ribosomal protein S11 NUG21_16050 PF00416 Ribosomal protein S13/S18 NUG21_16055 PF00344 SecY translocase NUG21_16060 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A NUG21_16065 PF00327 Ribosomal protein L30p/L7e NUG21_16070 PF00333 Ribosomal protein S5, N-terminal domain NUG21_16070 PF03719 Ribosomal protein S5, C-terminal domain NUG21_16075 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast NUG21_16080 PF00347 Ribosomal protein L6 NUG21_16085 PF00410 Ribosomal protein S8 NUG21_16090 PF00253 Ribosomal protein S14p/S29e NUG21_16095 PF00281 Ribosomal protein L5 NUG21_16095 PF00673 ribosomal L5P family C-terminus NUG21_16100 PF00467 KOW motif NUG21_16100 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 NUG21_16105 PF00238 Ribosomal protein L14p/L23e NUG21_16110 PF00366 Ribosomal protein S17 NUG21_16115 PF00831 Ribosomal L29 protein NUG21_16120 PF00252 Ribosomal protein L16p/L10e NUG21_16125 PF07650 KH domain NUG21_16125 PF00189 Ribosomal protein S3, C-terminal domain NUG21_16130 PF00237 Ribosomal protein L22p/L17e NUG21_16135 PF00203 Ribosomal protein S19 NUG21_16140 PF00181 Ribosomal Proteins L2, RNA binding domain NUG21_16140 PF03947 Ribosomal Proteins L2, C-terminal domain NUG21_16145 PF00276 Ribosomal protein L23 NUG21_16150 PF00573 Ribosomal protein L4/L1 family NUG21_16155 PF00297 Ribosomal protein L3 NUG21_16160 PF00338 Ribosomal protein S10p/S20e NUG21_16165 PF00009 Elongation factor Tu GTP binding domain NUG21_16165 PF03144 Elongation factor Tu domain 2 NUG21_16165 PF03143 Elongation factor Tu C-terminal domain NUG21_16170 PF00679 Elongation factor G C-terminus NUG21_16170 PF03764 Elongation factor G, domain IV NUG21_16170 PF00009 Elongation factor Tu GTP binding domain NUG21_16170 PF03144 Elongation factor Tu domain 2 NUG21_16170 PF14492 Elongation Factor G, domain II NUG21_16175 PF00177 Ribosomal protein S7p/S5e NUG21_16180 PF00164 Ribosomal protein S12/S23 NUG21_16185 PF04997 RNA polymerase Rpb1, domain 1 NUG21_16185 PF00623 RNA polymerase Rpb1, domain 2 NUG21_16185 PF04983 RNA polymerase Rpb1, domain 3 NUG21_16185 PF05000 RNA polymerase Rpb1, domain 4 NUG21_16185 PF04998 RNA polymerase Rpb1, domain 5 NUG21_16190 PF04560 RNA polymerase Rpb2, domain 7 NUG21_16190 PF00562 RNA polymerase Rpb2, domain 6 NUG21_16190 PF04565 RNA polymerase Rpb2, domain 3 NUG21_16190 PF10385 RNA polymerase beta subunit external 1 domain NUG21_16190 PF04563 RNA polymerase beta subunit NUG21_16190 PF04561 RNA polymerase Rpb2, domain 2 NUG21_16195 PF00542 Ribosomal protein L7/L12 C-terminal domain NUG21_16195 PF16320 Ribosomal protein L7/L12 dimerisation domain NUG21_16200 PF00466 Ribosomal protein L10 NUG21_16205 PF00687 Ribosomal protein L1p/L10e family NUG21_16210 PF00298 Ribosomal protein L11, RNA binding domain NUG21_16210 PF03946 Ribosomal protein L11, N-terminal domain NUG21_16215 PF00467 KOW motif NUG21_16215 PF02357 Transcription termination factor nusG NUG21_16220 PF00584 SecE/Sec61-gamma subunits of protein translocation complex NUG21_16230 PF00009 Elongation factor Tu GTP binding domain NUG21_16230 PF03143 Elongation factor Tu C-terminal domain NUG21_16230 PF03144 Elongation factor Tu domain 2 NUG21_16250 PF01926 50S ribosome-binding GTPase NUG21_16250 PF06071 Protein of unknown function (DUF933) NUG21_16255 PF01195 Peptidyl-tRNA hydrolase NUG21_16260 PF14693 Ribosomal protein TL5, C-terminal domain NUG21_16260 PF01386 Ribosomal L25p family NUG21_16265 PF14572 Phosphoribosyl synthetase-associated domain NUG21_16265 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NUG21_16275 PF08544 GHMP kinases C terminal NUG21_16275 PF00288 GHMP kinases N terminal domain NUG21_16280 PF03550 Outer membrane lipoprotein LolB NUG21_16290 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain NUG21_16290 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain NUG21_16290 PF01488 Shikimate / quinate 5-dehydrogenase NUG21_16295 PF03462 PCRF domain NUG21_16295 PF00472 RF-1 domain NUG21_16315 PF00994 Probable molybdopterin binding domain NUG21_16325 PF03976 Polyphosphate kinase 2 (PPK2) NUG21_16330 PF08534 Redoxin NUG21_16335 PF03631 Virulence factor BrkB NUG21_16340 PF03358 NADPH-dependent FMN reductase NUG21_16355 PF04073 Aminoacyl-tRNA editing domain NUG21_16360 PF00082 Subtilase family NUG21_16360 PF04151 Bacterial pre-peptidase C-terminal domain NUG21_16365 PF01063 Amino-transferase class IV NUG21_16380 PF02233 NAD(P) transhydrogenase beta subunit NUG21_16385 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch NUG21_16405 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NUG21_16405 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NUG21_16425 PF01367 5'-3' exonuclease, C-terminal SAM fold NUG21_16425 PF00476 DNA polymerase family A NUG21_16425 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NUG21_16425 PF01612 3'-5' exonuclease NUG21_16430 PF00293 NUDIX domain NUG21_16440 PF07690 Major Facilitator Superfamily NUG21_16445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUG21_16445 PF03466 LysR substrate binding domain NUG21_16460 PF00561 alpha/beta hydrolase fold NUG21_16475 PF05175 Methyltransferase small domain NUG21_16475 PF17827 PrmC N-terminal domain NUG21_16480 PF10417 C-terminal domain of 1-Cys peroxiredoxin NUG21_16480 PF00578 AhpC/TSA family NUG21_16485 PF07992 Pyridine nucleotide-disulphide oxidoreductase NUG21_16485 PF13192 Thioredoxin domain NUG21_16490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUG21_16490 PF03466 LysR substrate binding domain NUG21_16495 PF01272 Transcription elongation factor, GreA/GreB, C-term NUG21_16495 PF14760 Rnk N-terminus NUG21_16500 PF00923 Transaldolase/Fructose-6-phosphate aldolase NUG21_16525 PF01625 Peptide methionine sulfoxide reductase NUG21_16535 PF00072 Response regulator receiver domain NUG21_16535 PF00196 Bacterial regulatory proteins, luxR family NUG21_16540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUG21_16540 PF00512 His Kinase A (phospho-acceptor) domain NUG21_16540 PF01627 Hpt domain NUG21_16540 PF00072 Response regulator receiver domain NUG21_16540 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NUG21_16540 PF00672 HAMP domain NUG21_16545 PF00990 Diguanylate cyclase, GGDEF domain NUG21_16545 PF00072 Response regulator receiver domain NUG21_16555 PF00749 tRNA synthetases class I (E and Q), catalytic domain NUG21_16555 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain NUG21_16565 PF00892 EamA-like transporter family NUG21_16585 PF01728 FtsJ-like methyltransferase NUG21_16585 PF18125 RlmM ferredoxin-like domain NUG21_16590 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NUG21_16590 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NUG21_16620 PF01494 FAD binding domain NUG21_16625 PF01494 FAD binding domain NUG21_16635 PF01923 Cobalamin adenosyltransferase NUG21_16640 PF00850 Histone deacetylase domain NUG21_16645 PF04453 LPS transport system D NUG21_16645 PF03968 OstA-like protein NUG21_16650 PF00639 PPIC-type PPIASE domain NUG21_16650 PF09312 SurA N-terminal domain NUG21_16655 PF04166 Pyridoxal phosphate biosynthetic protein PdxA NUG21_16660 PF00398 Ribosomal RNA adenine dimethylase NUG21_16665 PF04379 ApaG domain NUG21_16670 PF00149 Calcineurin-like phosphoesterase NUG21_16675 PF00186 Dihydrofolate reductase NUG21_16680 PF00303 Thymidylate synthase NUG21_16685 PF01790 Prolipoprotein diacylglyceryl transferase NUG21_16700 PF04011 LemA family NUG21_16705 PF03741 Integral membrane protein TerC family NUG21_16710 PF01219 Prokaryotic diacylglycerol kinase NUG21_16720 PF00072 Response regulator receiver domain NUG21_16720 PF00486 Transcriptional regulatory protein, C terminal NUG21_16725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUG21_16725 PF00512 His Kinase A (phospho-acceptor) domain NUG21_16725 PF07689 KaiB domain NUG21_16730 PF00873 AcrB/AcrD/AcrF family NUG21_16735 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NUG21_16740 PF08521 Two-component sensor kinase N-terminal NUG21_16740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUG21_16740 PF00512 His Kinase A (phospho-acceptor) domain NUG21_16745 PF00072 Response regulator receiver domain NUG21_16745 PF00486 Transcriptional regulatory protein, C terminal NUG21_16750 PF13472 GDSL-like Lipase/Acylhydrolase family NUG21_16755 PF00005 ABC transporter NUG21_16765 PF02668 Taurine catabolism dioxygenase TauD, TfdA family NUG21_16775 PF00005 ABC transporter NUG21_16780 PF00528 Binding-protein-dependent transport system inner membrane component NUG21_16795 PF07715 TonB-dependent Receptor Plug Domain NUG21_16795 PF00593 TonB dependent receptor NUG21_16805 PF00248 Aldo/keto reductase family NUG21_16810 PF01773 Na+ dependent nucleoside transporter N-terminus NUG21_16810 PF07670 Nucleoside recognition NUG21_16810 PF07662 Na+ dependent nucleoside transporter C-terminus NUG21_16815 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) NUG21_16815 PF00294 pfkB family carbohydrate kinase NUG21_16825 PF01207 Dihydrouridine synthase (Dus) NUG21_16830 PF13649 Methyltransferase domain NUG21_16885 PF02773 S-adenosylmethionine synthetase, C-terminal domain NUG21_16885 PF02772 S-adenosylmethionine synthetase, central domain NUG21_16885 PF00438 S-adenosylmethionine synthetase, N-terminal domain NUG21_16920 PF00311 Phosphoenolpyruvate carboxylase NUG21_16930 PF05221 S-adenosyl-L-homocysteine hydrolase NUG21_16930 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NUG21_16955 PF00685 Sulfotransferase domain NUG21_16970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUG21_16970 PF00672 HAMP domain NUG21_16990 PF00128 Alpha amylase, catalytic domain NUG21_16995 PF02219 Methylenetetrahydrofolate reductase NUG21_17005 PF00293 NUDIX domain NUG21_17015 PF01494 FAD binding domain NUG21_17020 PF07516 SecA Wing and Scaffold domain NUG21_17020 PF01043 SecA preprotein cross-linking domain NUG21_17020 PF07517 SecA DEAD-like domain NUG21_17020 PF02810 SEC-C motif NUG21_17025 PF01551 Peptidase family M23 NUG21_17025 PF08525 Opacity-associated protein A N-terminal motif NUG21_17025 PF01476 LysM domain NUG21_17035 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase NUG21_17040 PF00091 Tubulin/FtsZ family, GTPase domain NUG21_17040 PF12327 FtsZ family, C-terminal domain NUG21_17045 PF02491 SHS2 domain inserted in FTSA NUG21_17050 PF08478 POTRA domain, FtsQ-type NUG21_17050 PF03799 Cell division protein FtsQ NUG21_17055 PF07478 D-ala D-ala ligase C-terminus NUG21_17055 PF01820 D-ala D-ala ligase N-terminus NUG21_17060 PF01225 Mur ligase family, catalytic domain NUG21_17060 PF02875 Mur ligase family, glutamate ligase domain NUG21_17060 PF08245 Mur ligase middle domain NUG21_17065 PF04101 Glycosyltransferase family 28 C-terminal domain NUG21_17065 PF03033 Glycosyltransferase family 28 N-terminal domain NUG21_17070 PF01098 Cell cycle protein NUG21_17075 PF00953 Glycosyl transferase family 4 NUG21_17080 PF02875 Mur ligase family, glutamate ligase domain NUG21_17080 PF08245 Mur ligase middle domain NUG21_17080 PF01225 Mur ligase family, catalytic domain NUG21_17085 PF01225 Mur ligase family, catalytic domain NUG21_17085 PF02875 Mur ligase family, glutamate ligase domain NUG21_17085 PF08245 Mur ligase middle domain NUG21_17090 PF03717 Penicillin-binding Protein dimerisation domain NUG21_17090 PF00905 Penicillin binding protein transpeptidase domain NUG21_17095 PF04999 Cell division protein FtsL NUG21_17100 PF01795 MraW methylase family NUG21_17105 PF02381 MraZ protein, putative antitoxin-like NUG21_17120 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NUG21_17130 PF02021 Uncharacterised protein family UPF0102 NUG21_17135 PF04307 LexA-binding, inner membrane-associated putative hydrolase NUG21_17140 PF02913 FAD linked oxidases, C-terminal domain NUG21_17140 PF01565 FAD binding domain NUG21_17150 PF00486 Transcriptional regulatory protein, C terminal NUG21_17150 PF00072 Response regulator receiver domain NUG21_17155 PF02702 Osmosensitive K+ channel His kinase sensor domain NUG21_17155 PF00512 His Kinase A (phospho-acceptor) domain NUG21_17155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUG21_17155 PF13492 GAF domain NUG21_17155 PF13493 Domain of unknown function (DUF4118) NUG21_17160 PF02669 K+-transporting ATPase, c chain NUG21_17170 PF03814 Potassium-transporting ATPase A subunit NUG21_17190 PF00586 AIR synthase related protein, N-terminal domain NUG21_17190 PF02769 AIR synthase related protein, C-terminal domain NUG21_17195 PF01029 NusB family NUG21_17200 PF00885 6,7-dimethyl-8-ribityllumazine synthase NUG21_17205 PF00925 GTP cyclohydrolase II NUG21_17205 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NUG21_17210 PF00677 Lumazine binding domain NUG21_17220 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NUG21_17220 PF01872 RibD C-terminal domain NUG21_17230 PF03477 ATP cone domain NUG21_17235 PF00464 Serine hydroxymethyltransferase NUG21_17250 PF07690 Major Facilitator Superfamily NUG21_17255 PF00005 ABC transporter NUG21_17255 PF12848 ABC transporter NUG21_17260 PF01327 Polypeptide deformylase NUG21_17265 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) NUG21_17270 PF01270 Glycosyl hydrolases family 8 NUG21_17275 PF03170 Bacterial cellulose synthase subunit NUG21_17280 PF00535 Glycosyl transferase family 2 NUG21_17280 PF03552 Cellulose synthase NUG21_17280 PF07238 PilZ domain NUG21_17295 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family NUG21_17295 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain NUG21_17340 PF00392 Bacterial regulatory proteins, gntR family NUG21_17340 PF07702 UTRA domain NUG21_17350 PF00263 Bacterial type II and III secretion system protein NUG21_17350 PF03958 Bacterial type II/III secretion system short domain NUG21_17360 PF10741 Type II secretion system (T2SS), protein M subtype b NUG21_17365 PF05137 Fimbrial assembly protein (PilN) NUG21_17370 PF03934 Type II secretion system (T2SS), protein K NUG21_17380 PF07963 Prokaryotic N-terminal methylation motif NUG21_17385 PF12019 Type II transport protein GspH NUG21_17390 PF08334 Type II secretion system (T2SS), protein G NUG21_17395 PF00482 Type II secretion system (T2SS), protein F NUG21_17400 PF00437 Type II/IV secretion system protein NUG21_17400 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NUG21_17405 PF04151 Bacterial pre-peptidase C-terminal domain NUG21_17405 PF00082 Subtilase family NUG21_17410 PF03895 YadA-like membrane anchor domain NUG21_17410 PF05658 Head domain of trimeric autotransporter adhesin NUG21_17410 PF05662 Coiled stalk of trimeric autotransporter adhesin NUG21_17410 PF13018 Extended Signal Peptide of Type V secretion system NUG21_17430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUG21_17430 PF02203 Tar ligand binding domain homologue NUG21_17430 PF00672 HAMP domain NUG21_17435 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain NUG21_17435 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal NUG21_17435 PF02769 AIR synthase related protein, C-terminal domain NUG21_17440 PF10411 Disulfide bond isomerase protein N-terminus NUG21_17440 PF13098 Thioredoxin-like domain NUG21_17445 PF02899 Phage integrase, N-terminal SAM-like domain NUG21_17445 PF00589 Phage integrase family NUG21_17465 PF00883 Cytosol aminopeptidase family, catalytic domain NUG21_17465 PF02789 Cytosol aminopeptidase family, N-terminal domain NUG21_17470 PF04364 DNA polymerase III chi subunit, HolC NUG21_17475 PF08264 Anticodon-binding domain of tRNA NUG21_17475 PF00133 tRNA synthetases class I (I, L, M and V) NUG21_17475 PF10458 Valyl tRNA synthetase tRNA binding arm NUG21_17480 PF00544 Pectate lyase NUG21_17495 PF01066 CDP-alcohol phosphatidyltransferase NUG21_17505 PF04073 Aminoacyl-tRNA editing domain NUG21_17505 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NUG21_17505 PF03129 Anticodon binding domain NUG21_17510 PF00816 H-NS histone family NUG21_17520 PF02405 Permease MlaE NUG21_17525 PF00005 ABC transporter NUG21_17530 PF03886 ABC-type transport auxiliary lipoprotein component NUG21_17530 PF02470 MlaD protein NUG21_17555 PF14307 Glycosyltransferase WbsX NUG21_17555 PF05045 Rhamnan synthesis protein F NUG21_17560 PF01144 Coenzyme A transferase NUG21_17565 PF01144 Coenzyme A transferase NUG21_17570 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NUG21_17570 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NUG21_17570 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NUG21_17570 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NUG21_17575 PF00483 Nucleotidyl transferase NUG21_17575 PF01050 Mannose-6-phosphate isomerase NUG21_17580 PF04321 RmlD substrate binding domain NUG21_17585 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase NUG21_17590 PF00483 Nucleotidyl transferase NUG21_17595 PF16363 GDP-mannose 4,6 dehydratase NUG21_17600 PF01012 Electron transfer flavoprotein domain NUG21_17605 PF01012 Electron transfer flavoprotein domain NUG21_17605 PF00766 Electron transfer flavoprotein FAD-binding domain NUG21_17615 PF01040 UbiA prenyltransferase family NUG21_17620 PF04030 D-arabinono-1,4-lactone oxidase NUG21_17620 PF01565 FAD binding domain NUG21_17625 PF00106 short chain dehydrogenase NUG21_17635 PF01370 NAD dependent epimerase/dehydratase family NUG21_17640 PF01593 Flavin containing amine oxidoreductase NUG21_17660 PF14524 Wzt C-terminal domain NUG21_17660 PF00005 ABC transporter NUG21_17670 PF01053 Cys/Met metabolism PLP-dependent enzyme NUG21_17675 PF00571 CBS domain NUG21_17675 PF00291 Pyridoxal-phosphate dependent enzyme NUG21_17695 PF00437 Type II/IV secretion system protein NUG21_17700 PF14497 Glutathione S-transferase, C-terminal domain NUG21_17700 PF02798 Glutathione S-transferase, N-terminal domain NUG21_17710 PF00270 DEAD/DEAH box helicase NUG21_17710 PF00271 Helicase conserved C-terminal domain NUG21_17715 PF01242 6-pyruvoyl tetrahydropterin synthase NUG21_17730 PF13185 GAF domain NUG21_17740 PF00593 TonB dependent receptor NUG21_17740 PF07715 TonB-dependent Receptor Plug Domain NUG21_17750 PF03466 LysR substrate binding domain NUG21_17750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUG21_17765 PF16123 Hydroxyacylglutathione hydrolase C-terminus NUG21_17765 PF00753 Metallo-beta-lactamase superfamily NUG21_17770 PF13419 Haloacid dehalogenase-like hydrolase NUG21_17775 PF00817 impB/mucB/samB family NUG21_17775 PF11799 impB/mucB/samB family C-terminal domain NUG21_17775 PF11798 IMS family HHH motif NUG21_17780 PF07977 FabA-like domain NUG21_17785 PF02801 Beta-ketoacyl synthase, C-terminal domain NUG21_17785 PF00109 Beta-ketoacyl synthase, N-terminal domain NUG21_17795 PF01432 Peptidase family M3 NUG21_17800 PF00291 Pyridoxal-phosphate dependent enzyme NUG21_17810 PF00403 Heavy-metal-associated domain NUG21_17815 PF00376 MerR family regulatory protein NUG21_17815 PF09278 MerR, DNA binding NUG21_17825 PF00394 Multicopper oxidase NUG21_17825 PF07731 Multicopper oxidase NUG21_17825 PF07732 Multicopper oxidase NUG21_17830 PF05275 Copper resistance protein B precursor (CopB) NUG21_17840 PF02909 Tetracyclin repressor-like, C-terminal domain NUG21_17840 PF00440 Bacterial regulatory proteins, tetR family NUG21_17845 PF01494 FAD binding domain NUG21_17850 PF01380 SIS domain NUG21_17855 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NUG21_17860 PF00005 ABC transporter NUG21_17865 PF12704 MacB-like periplasmic core domain NUG21_17865 PF02687 FtsX-like permease family NUG21_17870 PF00005 ABC transporter NUG21_17870 PF02687 FtsX-like permease family NUG21_17870 PF12704 MacB-like periplasmic core domain NUG21_17875 PF00005 ABC transporter NUG21_17875 PF02687 FtsX-like permease family NUG21_17875 PF12704 MacB-like periplasmic core domain NUG21_17880 PF02687 FtsX-like permease family NUG21_17880 PF12704 MacB-like periplasmic core domain NUG21_17885 PF02687 FtsX-like permease family NUG21_17885 PF12704 MacB-like periplasmic core domain NUG21_17890 PF12704 MacB-like periplasmic core domain NUG21_17890 PF00005 ABC transporter NUG21_17890 PF02687 FtsX-like permease family NUG21_17900 PF12704 MacB-like periplasmic core domain NUG21_17900 PF02687 FtsX-like permease family NUG21_17905 PF02687 FtsX-like permease family NUG21_17905 PF00005 ABC transporter NUG21_17905 PF12704 MacB-like periplasmic core domain NUG21_17910 PF12704 MacB-like periplasmic core domain NUG21_17910 PF02687 FtsX-like permease family NUG21_17910 PF00005 ABC transporter NUG21_17915 PF00158 Sigma-54 interaction domain NUG21_17915 PF00072 Response regulator receiver domain NUG21_17915 PF02954 Bacterial regulatory protein, Fis family NUG21_17920 PF00989 PAS fold NUG21_17920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUG21_17920 PF00512 His Kinase A (phospho-acceptor) domain NUG21_17930 PF00132 Bacterial transferase hexapeptide (six repeats) NUG21_17930 PF14602 Hexapeptide repeat of succinyl-transferase NUG21_17930 PF12804 MobA-like NTP transferase domain NUG21_17945 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain NUG21_17945 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain NUG21_17950 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NUG21_17950 PF02874 ATP synthase alpha/beta family, beta-barrel domain NUG21_17955 PF00231 ATP synthase NUG21_17960 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NUG21_17960 PF00306 ATP synthase alpha/beta chain, C terminal domain NUG21_17960 PF02874 ATP synthase alpha/beta family, beta-barrel domain NUG21_17965 PF00213 ATP synthase delta (OSCP) subunit NUG21_17970 PF00430 ATP synthase B/B' CF(0) NUG21_17975 PF00137 ATP synthase subunit C NUG21_17980 PF00119 ATP synthase A chain NUG21_18000 PF07992 Pyridine nucleotide-disulphide oxidoreductase NUG21_18000 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NUG21_18005 PF02817 e3 binding domain NUG21_18005 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NUG21_18005 PF00364 Biotin-requiring enzyme NUG21_18030 PF03180 NLPA lipoprotein NUG21_18035 PF00528 Binding-protein-dependent transport system inner membrane component NUG21_18040 PF00005 ABC transporter NUG21_18040 PF09383 NIL domain NUG21_18045 PF00892 EamA-like transporter family NUG21_18050 PF04461 Protein of unknown function (DUF520) NUG21_18060 PF00849 RNA pseudouridylate synthase NUG21_18060 PF01479 S4 domain NUG21_18065 PF05175 Methyltransferase small domain NUG21_18065 PF08468 Methyltransferase small domain N-terminal NUG21_18075 PF07995 Glucose / Sorbosone dehydrogenase NUG21_18085 PF00497 Bacterial extracellular solute-binding proteins, family 3 NUG21_18085 PF00072 Response regulator receiver domain NUG21_18085 PF00989 PAS fold NUG21_18085 PF00512 His Kinase A (phospho-acceptor) domain NUG21_18085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUG21_18085 PF01627 Hpt domain NUG21_18105 PF01168 Alanine racemase, N-terminal domain NUG21_18105 PF00842 Alanine racemase, C-terminal domain NUG21_18110 PF01266 FAD dependent oxidoreductase NUG21_18115 PF01037 Lrp/AsnC ligand binding domain NUG21_18130 PF01641 SelR domain NUG21_18140 PF01618 MotA/TolQ/ExbB proton channel family NUG21_18145 PF00691 OmpA family NUG21_18145 PF13677 Membrane MotB of proton-channel complex MotA/MotB NUG21_18170 PF01061 ABC-2 type transporter NUG21_18175 PF00005 ABC transporter NUG21_18180 PF00892 EamA-like transporter family NUG21_18185 PF01037 Lrp/AsnC ligand binding domain NUG21_18190 PF00999 Sodium/hydrogen exchanger family NUG21_18200 PF02469 Fasciclin domain NUG21_18205 PF03167 Uracil DNA glycosylase superfamily NUG21_18215 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase NUG21_18225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUG21_18225 PF03466 LysR substrate binding domain NUG21_18230 PF03358 NADPH-dependent FMN reductase NUG21_18255 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) NUG21_18260 PF01965 DJ-1/PfpI family NUG21_18265 PF03466 LysR substrate binding domain NUG21_18265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUG21_18270 PF00248 Aldo/keto reductase family NUG21_18275 PF02627 Carboxymuconolactone decarboxylase family NUG21_18280 PF00248 Aldo/keto reductase family NUG21_18295 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NUG21_18295 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NUG21_18300 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family NUG21_18305 PF00753 Metallo-beta-lactamase superfamily NUG21_18320 PF00990 Diguanylate cyclase, GGDEF domain NUG21_18325 PF00355 Rieske [2Fe-2S] domain NUG21_18330 PF03707 Bacterial signalling protein N terminal repeat NUG21_18330 PF13188 PAS domain NUG21_18330 PF00563 EAL domain NUG21_18330 PF00990 Diguanylate cyclase, GGDEF domain NUG21_18345 PF07715 TonB-dependent Receptor Plug Domain NUG21_18345 PF00593 TonB dependent receptor NUG21_18360 PF01220 Dehydroquinase class II NUG21_18370 PF13520 Amino acid permease NUG21_18385 PF00150 Cellulase (glycosyl hydrolase family 5) NUG21_18385 PF00553 Cellulose binding domain NUG21_18390 PF00150 Cellulase (glycosyl hydrolase family 5) NUG21_18390 PF00553 Cellulose binding domain NUG21_18395 PF05193 Peptidase M16 inactive domain NUG21_18395 PF00675 Insulinase (Peptidase family M16) NUG21_18415 PF01204 Trehalase NUG21_18425 PF01464 Transglycosylase SLT domain NUG21_18435 PF00497 Bacterial extracellular solute-binding proteins, family 3 NUG21_18445 PF06719 AraC-type transcriptional regulator N-terminus NUG21_18445 PF12833 Helix-turn-helix domain NUG21_18455 PF01544 CorA-like Mg2+ transporter protein NUG21_18460 PF00324 Amino acid permease NUG21_18470 PF00892 EamA-like transporter family NUG21_18485 PF03466 LysR substrate binding domain NUG21_18485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUG21_18490 PF02525 Flavodoxin-like fold NUG21_18495 PF07759 Protein of unknown function (DUF1615) NUG21_18505 PF12823 Domain of unknown function (DUF3817) NUG21_18505 PF03176 MMPL family NUG21_18510 PF02449 Beta-galactosidase NUG21_18510 PF08533 Beta-galactosidase C-terminal domain NUG21_18510 PF08532 Beta-galactosidase trimerisation domain NUG21_18515 PF17189 Glycosyl hydrolase family 30 beta sandwich domain NUG21_18520 PF00561 alpha/beta hydrolase fold NUG21_18525 PF07804 HipA-like C-terminal domain NUG21_18540 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family NUG21_18605 PF17831 Pyruvate dehydrogenase E1 component middle domain NUG21_18605 PF00456 Transketolase, thiamine diphosphate binding domain NUG21_18655 PF04264 YceI-like domain NUG21_18660 PF00881 Nitroreductase family NUG21_18680 PF03009 Glycerophosphoryl diester phosphodiesterase family NUG21_18690 PF08335 GlnD PII-uridylyltransferase NUG21_18690 PF03710 Glutamate-ammonia ligase adenylyltransferase NUG21_18695 PF08946 Osmosensory transporter coiled coil NUG21_18695 PF00083 Sugar (and other) transporter NUG21_18705 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain NUG21_18705 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain NUG21_18710 PF01541 GIY-YIG catalytic domain NUG21_18715 PF00793 DAHP synthetase I family NUG21_18720 PF07715 TonB-dependent Receptor Plug Domain NUG21_18720 PF00593 TonB dependent receptor NUG21_18725 PF00118 TCP-1/cpn60 chaperonin family NUG21_18730 PF00166 Chaperonin 10 Kd subunit NUG21_18735 PF04231 Endonuclease I NUG21_18740 PF03091 CutA1 divalent ion tolerance protein NUG21_18745 PF11412 Disulphide bond corrector protein DsbC NUG21_18745 PF02683 Cytochrome C biogenesis protein transmembrane region NUG21_18750 PF00578 AhpC/TSA family NUG21_18765 PF01220 Dehydroquinase class II NUG21_18770 PF00364 Biotin-requiring enzyme NUG21_18780 PF02785 Biotin carboxylase C-terminal domain NUG21_18780 PF00289 Biotin carboxylase, N-terminal domain NUG21_18780 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NUG21_18810 PF02954 Bacterial regulatory protein, Fis family NUG21_18840 PF00782 Dual specificity phosphatase, catalytic domain NUG21_18845 PF12146 Serine aminopeptidase, S33 NUG21_18845 PF12147 Putative methyltransferase NUG21_18850 PF01066 CDP-alcohol phosphatidyltransferase NUG21_18860 PF01808 AICARFT/IMPCHase bienzyme NUG21_18860 PF02142 MGS-like domain NUG21_18870 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NUG21_18870 PF02843 Phosphoribosylglycinamide synthetase, C domain NUG21_18870 PF02844 Phosphoribosylglycinamide synthetase, N domain NUG21_18880 PF12805 FUSC-like inner membrane protein yccS NUG21_18885 PF07690 Major Facilitator Superfamily NUG21_18895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUG21_18895 PF03466 LysR substrate binding domain NUG21_18935 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain NUG21_18935 PF09297 NADH pyrophosphatase zinc ribbon domain NUG21_18935 PF00293 NUDIX domain NUG21_18940 PF01521 Iron-sulphur cluster biosynthesis NUG21_18960 PF00072 Response regulator receiver domain NUG21_18960 PF00563 EAL domain NUG21_18960 PF00990 Diguanylate cyclase, GGDEF domain NUG21_18965 PF01627 Hpt domain NUG21_18965 PF00072 Response regulator receiver domain NUG21_18965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUG21_18965 PF00672 HAMP domain NUG21_18965 PF00512 His Kinase A (phospho-acceptor) domain NUG21_18965 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NUG21_18970 PF00210 Ferritin-like domain NUG21_18975 PF04324 BFD-like [2Fe-2S] binding domain NUG21_18980 PF00293 NUDIX domain NUG21_18995 PF00380 Ribosomal protein S9/S16 NUG21_19000 PF00572 Ribosomal protein L13 NUG21_19005 PF03232 Ubiquinone biosynthesis protein COQ7 NUG21_19015 PF00893 Small Multidrug Resistance protein NUG21_19020 PF02675 S-adenosylmethionine decarboxylase NUG21_19025 PF00325 Bacterial regulatory proteins, crp family NUG21_19025 PF00027 Cyclic nucleotide-binding domain NUG21_19030 PF01925 Sulfite exporter TauE/SafE NUG21_19035 PF03425 Carbohydrate binding domain (family 11) NUG21_19035 PF00150 Cellulase (glycosyl hydrolase family 5) NUG21_19035 PF00404 Dockerin type I domain NUG21_19035 PF02156 Glycosyl hydrolase family 26 NUG21_19045 PF00218 Indole-3-glycerol phosphate synthase NUG21_19050 PF02885 Glycosyl transferase family, helical bundle domain NUG21_19050 PF00591 Glycosyl transferase family, a/b domain NUG21_19060 PF00117 Glutamine amidotransferase class-I NUG21_19095 PF03401 Tripartite tricarboxylate transporter family receptor NUG21_19100 PF01042 Endoribonuclease L-PSP NUG21_19105 PF07992 Pyridine nucleotide-disulphide oxidoreductase NUG21_19105 PF17806 Sarcosine oxidase A3 domain NUG21_19115 PF01266 FAD dependent oxidoreductase NUG21_19125 PF03466 LysR substrate binding domain NUG21_19125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUG21_19130 PF00892 EamA-like transporter family NUG21_19135 PF02558 Ketopantoate reductase PanE/ApbA NUG21_19135 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain NUG21_19150 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NUG21_19190 PF01751 Toprim domain NUG21_19190 PF01131 DNA topoisomerase NUG21_19195 PF00145 C-5 cytosine-specific DNA methylase NUG21_19275 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NUG21_19315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUG21_19315 PF00512 His Kinase A (phospho-acceptor) domain NUG21_19315 PF01627 Hpt domain NUG21_19315 PF00072 Response regulator receiver domain NUG21_19315 PF00672 HAMP domain NUG21_19315 PF17149 Periplasmic sensor domain found in signal transduction proteins NUG21_19395 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NUG21_19395 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NUG21_19400 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NUG21_19400 PF14579 Helix-hairpin-helix motif NUG21_19400 PF02811 PHP domain NUG21_19400 PF07733 Bacterial DNA polymerase III alpha NTPase domain NUG21_19415 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain NUG21_19415 PF00589 Phage integrase family NUG21_19420 PF02796 Helix-turn-helix domain of resolvase NUG21_19420 PF00239 Resolvase, N terminal domain NUG21_19545 PF04717 Type VI secretion system, phage-baseplate injector NUG21_19545 PF06715 Gp5 C-terminal repeat (3 copies) NUG21_19550 PF03466 LysR substrate binding domain NUG21_19550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUG21_19555 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NUG21_19555 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NUG21_19560 PF03401 Tripartite tricarboxylate transporter family receptor NUG21_19570 PF04002 RadC-like JAB domain NUG21_19605 PF00589 Phage integrase family NUG21_19605 PF13356 Arm DNA-binding domain NUG21_19615 PF01212 Beta-eliminating lyase NUG21_19620 PF00425 chorismate binding enzyme NUG21_19620 PF04715 Anthranilate synthase component I, N terminal region NUG21_19625 PF00781 Diacylglycerol kinase catalytic domain NUG21_19635 PF00834 Ribulose-phosphate 3 epimerase family NUG21_19640 PF00226 DnaJ domain NUG21_19640 PF00684 DnaJ central domain NUG21_19640 PF01556 DnaJ C terminal domain NUG21_19645 PF01259 SAICAR synthetase NUG21_19675 PF13244 Domain of unknown function (DUF4040) NUG21_19675 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter NUG21_19675 PF00361 Proton-conducting membrane transporter NUG21_19675 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NUG21_19680 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NUG21_19685 PF00361 Proton-conducting membrane transporter NUG21_19695 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) NUG21_19700 PF03334 Na+/H+ antiporter subunit NUG21_19705 PF01699 Sodium/calcium exchanger protein NUG21_19710 PF00199 Catalase NUG21_19720 PF00593 TonB dependent receptor NUG21_19720 PF07715 TonB-dependent Receptor Plug Domain NUG21_19725 PF00990 Diguanylate cyclase, GGDEF domain NUG21_19725 PF00072 Response regulator receiver domain NUG21_19730 PF00072 Response regulator receiver domain NUG21_19730 PF00196 Bacterial regulatory proteins, luxR family NUG21_19735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUG21_19735 PF07730 Histidine kinase NUG21_19745 PF00005 ABC transporter NUG21_19750 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NUG21_19755 PF00005 ABC transporter NUG21_19760 PF02687 FtsX-like permease family NUG21_19760 PF12704 MacB-like periplasmic core domain NUG21_19775 PF00892 EamA-like transporter family NUG21_19780 PF00892 EamA-like transporter family NUG21_19800 PF00753 Metallo-beta-lactamase superfamily NUG21_19805 PF00579 tRNA synthetases class I (W and Y) NUG21_19815 PF05532 CsbD-like NUG21_19830 PF00491 Arginase family NUG21_19850 PF03309 Type III pantothenate kinase NUG21_19855 PF02237 Biotin protein ligase C terminal domain NUG21_19855 PF03099 Biotin/lipoate A/B protein ligase family NUG21_19855 PF08279 HTH domain NUG21_19865 PF06167 Glucose-regulated metallo-peptidase M90 NUG21_19880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUG21_19885 PF00486 Transcriptional regulatory protein, C terminal NUG21_19885 PF00072 Response regulator receiver domain NUG21_19895 PF01207 Dihydrouridine synthase (Dus) NUG21_19900 PF01717 Cobalamin-independent synthase, Catalytic domain NUG21_19900 PF08267 Cobalamin-independent synthase, N-terminal domain NUG21_19910 PF02321 Outer membrane efflux protein NUG21_19915 PF00873 AcrB/AcrD/AcrF family NUG21_19920 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NUG21_19920 PF00529 HlyD membrane-fusion protein of T1SS NUG21_19925 PF00672 HAMP domain NUG21_19925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUG21_19925 PF00512 His Kinase A (phospho-acceptor) domain NUG21_19930 PF00072 Response regulator receiver domain NUG21_19930 PF00486 Transcriptional regulatory protein, C terminal NUG21_19935 PF00551 Formyl transferase NUG21_19945 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NUG21_19945 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NUG21_19950 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NUG21_19955 PF02146 Sir2 family NUG21_19960 PF00486 Transcriptional regulatory protein, C terminal NUG21_19960 PF00072 Response regulator receiver domain NUG21_19965 PF00072 Response regulator receiver domain NUG21_19965 PF13188 PAS domain NUG21_19965 PF08448 PAS fold NUG21_19965 PF00512 His Kinase A (phospho-acceptor) domain NUG21_19965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUG21_19975 PF04151 Bacterial pre-peptidase C-terminal domain NUG21_19975 PF00082 Subtilase family NUG21_19980 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NUG21_19985 PF07690 Major Facilitator Superfamily NUG21_19990 PF03466 LysR substrate binding domain NUG21_19990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUG21_20005 PF00268 Ribonucleotide reductase, small chain NUG21_20010 PF02867 Ribonucleotide reductase, barrel domain NUG21_20010 PF03477 ATP cone domain NUG21_20010 PF00317 Ribonucleotide reductase, all-alpha domain NUG21_20015 PF02146 Sir2 family NUG21_20020 PF02566 OsmC-like protein NUG21_20025 PF01047 MarR family NUG21_20035 PF03969 AFG1-like ATPase NUG21_20050 PF02492 CobW/HypB/UreG, nucleotide-binding domain NUG21_20050 PF07683 Cobalamin synthesis protein cobW C-terminal domain NUG21_20075 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NUG21_20075 PF02770 Acyl-CoA dehydrogenase, middle domain NUG21_20075 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NUG21_20080 PF01039 Carboxyl transferase domain NUG21_20085 PF02785 Biotin carboxylase C-terminal domain NUG21_20085 PF00289 Biotin carboxylase, N-terminal domain NUG21_20085 PF00364 Biotin-requiring enzyme NUG21_20085 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NUG21_20115 PF13607 Succinyl-CoA ligase like flavodoxin domain NUG21_20115 PF13380 CoA binding domain NUG21_20115 PF00583 Acetyltransferase (GNAT) family NUG21_20120 PF00999 Sodium/hydrogen exchanger family NUG21_20120 PF02254 TrkA-N domain NUG21_20125 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain NUG21_20125 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain NUG21_20130 PF00723 Glycosyl hydrolases family 15 NUG21_20135 PF00486 Transcriptional regulatory protein, C terminal NUG21_20135 PF00072 Response regulator receiver domain NUG21_20140 PF00512 His Kinase A (phospho-acceptor) domain NUG21_20140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUG21_20145 PF05662 Coiled stalk of trimeric autotransporter adhesin NUG21_20145 PF03895 YadA-like membrane anchor domain NUG21_20145 PF13018 Extended Signal Peptide of Type V secretion system NUG21_20145 PF05658 Head domain of trimeric autotransporter adhesin NUG21_20150 PF00082 Subtilase family NUG21_20150 PF04151 Bacterial pre-peptidase C-terminal domain NUG21_20160 PF05166 YcgL domain NUG21_20165 PF02801 Beta-ketoacyl synthase, C-terminal domain NUG21_20165 PF00109 Beta-ketoacyl synthase, N-terminal domain NUG21_20175 PF00535 Glycosyl transferase family 2 NUG21_20185 PF07519 Tannase and feruloyl esterase NUG21_20215 PF07977 FabA-like domain NUG21_20230 PF00550 Phosphopantetheine attachment site NUG21_20235 PF04820 Tryptophan halogenase NUG21_20250 PF02322 Cytochrome bd terminal oxidase subunit II NUG21_20255 PF01654 Cytochrome bd terminal oxidase subunit I NUG21_20270 PF01218 Coproporphyrinogen III oxidase NUG21_20280 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NUG21_20280 PF01367 5'-3' exonuclease, C-terminal SAM fold NUG21_20280 PF01612 3'-5' exonuclease NUG21_20280 PF00476 DNA polymerase family A NUG21_20290 PF00582 Universal stress protein family NUG21_20295 PF12464 Maltose acetyltransferase NUG21_20295 PF14602 Hexapeptide repeat of succinyl-transferase NUG21_20300 PF00753 Metallo-beta-lactamase superfamily NUG21_20315 PF03372 Endonuclease/Exonuclease/phosphatase family NUG21_20320 PF13091 PLD-like domain NUG21_20325 PF03706 Lysylphosphatidylglycerol synthase TM region NUG21_20335 PF13361 UvrD-like helicase C-terminal domain NUG21_20335 PF00580 UvrD/REP helicase N-terminal domain NUG21_20340 PF03466 LysR substrate binding domain NUG21_20340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUG21_20345 PF07690 Major Facilitator Superfamily NUG21_20355 PF13091 PLD-like domain NUG21_20355 PF13396 Phospholipase_D-nuclease N-terminal NUG21_20360 PF00471 Ribosomal protein L33 NUG21_20365 PF00830 Ribosomal L28 family NUG21_20370 PF03466 LysR substrate binding domain NUG21_20370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NUG21_20375 PF01042 Endoribonuclease L-PSP NUG21_20385 PF02321 Outer membrane efflux protein NUG21_20390 PF00529 HlyD membrane-fusion protein of T1SS NUG21_20390 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NUG21_20395 PF00873 AcrB/AcrD/AcrF family NUG21_20415 PF00535 Glycosyl transferase family 2 NUG21_20420 PF01370 NAD dependent epimerase/dehydratase family NUG21_20430 PF17762 HTH domain found in ParB protein NUG21_20430 PF02195 ParB-like nuclease domain NUG21_20435 PF13614 AAA domain NUG21_20440 PF02527 rRNA small subunit methyltransferase G NUG21_20445 PF01648 4'-phosphopantetheinyl transferase superfamily NUG21_20450 PF04226 Transglycosylase associated protein NUG21_20470 PF09312 SurA N-terminal domain NUG21_20480 PF00171 Aldehyde dehydrogenase family NUG21_20485 PF13419 Haloacid dehalogenase-like hydrolase NUG21_20490 PF00474 Sodium:solute symporter family NUG21_20505 PF16177 Acetyl-coenzyme A synthetase N-terminus NUG21_20505 PF00501 AMP-binding enzyme NUG21_20505 PF13193 AMP-binding enzyme C-terminal domain NUG21_20510 PF00196 Bacterial regulatory proteins, luxR family NUG21_20510 PF00072 Response regulator receiver domain NUG21_20515 PF02677 Epoxyqueuosine reductase QueH NUG21_20520 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NUG21_20520 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NUG21_20525 PF00378 Enoyl-CoA hydratase/isomerase NUG21_20530 PF00378 Enoyl-CoA hydratase/isomerase NUG21_20535 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NUG21_20535 PF02770 Acyl-CoA dehydrogenase, middle domain NUG21_20535 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NUG21_20540 PF00171 Aldehyde dehydrogenase family NUG21_20550 PF02659 Putative manganese efflux pump NUG21_20565 PF07715 TonB-dependent Receptor Plug Domain NUG21_20565 PF00593 TonB dependent receptor NUG21_20570 PF13181 Tetratricopeptide repeat NUG21_20575 PF00072 Response regulator receiver domain NUG21_20575 PF01627 Hpt domain NUG21_20575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NUG21_20575 PF00672 HAMP domain NUG21_20575 PF00512 His Kinase A (phospho-acceptor) domain NUG21_20580 PF00004 ATPase family associated with various cellular activities (AAA) NUG21_20580 PF17862 AAA+ lid domain NUG21_20580 PF01434 Peptidase family M41 NUG21_20590 PF04070 Domain of unknown function (DUF378) NUG21_20595 PF02245 Methylpurine-DNA glycosylase (MPG) NUG21_20600 PF10459 Peptidase S46 NUG21_20625 PF04357 TamB, inner membrane protein subunit of TAM complex NUG21_20630 PF17243 POTRA domain TamA domain 1 NUG21_20630 PF07244 Surface antigen variable number repeat NUG21_20630 PF01103 Surface antigen NUG21_20635 PF13302 Acetyltransferase (GNAT) domain NUG21_20645 PF04337 Protein of unknown function, DUF480 NUG21_20660 PF13332 Hemagglutinin repeat NUG21_20660 PF05860 haemagglutination activity domain NUG21_20660 PF04829 Pre-toxin domain with VENN motif NUG21_20660 PF04829 Pre-toxin domain with VENN motif NUG21_20660 PF15526 Novel toxin 21 NUG21_20660 PF05594 Haemagluttinin repeat NUG21_20660 PF13332 Hemagglutinin repeat NUG21_20660 PF05594 Haemagluttinin repeat NUG21_20660 PF15526 Novel toxin 21 NUG21_20660 PF04829 Pre-toxin domain with VENN motif NUG21_20660 PF05860 haemagglutination activity domain NUG21_20660 PF05860 haemagglutination activity domain NUG21_20660 PF05594 Haemagluttinin repeat NUG21_20660 PF15526 Novel toxin 21 NUG21_20660 PF13332 Hemagglutinin repeat NUG21_20665 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB NUG21_20665 PF17287 POTRA domain NUG21_20665 PF08479 POTRA domain, ShlB-type NUG21_20670 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) NUG21_20675 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NUG21_20680 PF04820 Tryptophan halogenase NUG21_20690 PF00356 Bacterial regulatory proteins, lacI family NUG21_20705 PF01553 Acyltransferase NUG21_20760 PF04244 Deoxyribodipyrimidine photo-lyase-related protein NUG21_20780 PF01171 PP-loop family NUG21_20785 PF04381 Putative exonuclease, RdgC NUG21_20795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NUG21_20795 PF02203 Tar ligand binding domain homologue NUG21_20795 PF00672 HAMP domain NUG21_20800 PF12697 Alpha/beta hydrolase family NUG21_20805 PF00762 Ferrochelatase NUG21_20815 PF02416 mttA/Hcf106 family NUG21_20820 PF02416 mttA/Hcf106 family NUG21_20825 PF00902 Sec-independent protein translocase protein (TatC) NUG21_20830 PF00089 Trypsin NUG21_20845 PF00958 GMP synthase C terminal domain NUG21_20845 PF02540 NAD synthase NUG21_20845 PF00117 Glutamine amidotransferase class-I NUG21_20870 PF00437 Type II/IV secretion system protein NUG21_20870 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NUG21_20875 PF02091 Glycyl-tRNA synthetase alpha subunit NUG21_20885 PF05746 DALR anticodon binding domain NUG21_20885 PF02092 Glycyl-tRNA synthetase beta subunit NUG21_20890 PF00580 UvrD/REP helicase N-terminal domain NUG21_20890 PF13361 UvrD-like helicase C-terminal domain NUG21_20895 PF00265 Thymidine kinase NUG21_20905 PF04349 Periplasmic glucan biosynthesis protein, MdoG NUG21_20910 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NUG21_20910 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NUG21_20910 PF06827 Zinc finger found in FPG and IleRS NUG21_20925 PF00005 ABC transporter NUG21_20930 PF01638 HxlR-like helix-turn-helix NUG21_20940 PF01926 50S ribosome-binding GTPase NUG21_20940 PF12631 MnmE helical domain NUG21_20940 PF10396 GTP-binding protein TrmE N-terminus NUG21_20945 PF03422 Carbohydrate binding module (family 6) NUG21_20945 PF00457 Glycosyl hydrolases family 11 NUG21_20945 PF01522 Polysaccharide deacetylase NUG21_20950 PF02096 60Kd inner membrane protein NUG21_20950 PF14849 YidC periplasmic domain NUG21_20955 PF00825 Ribonuclease P NUG21_20960 PF00468 Ribosomal protein L34