locus-tag class description KCU57_00005 PF00308 Bacterial dnaA protein KCU57_00005 PF08299 Bacterial dnaA protein helix-turn-helix KCU57_00005 PF11638 DnaA N-terminal domain KCU57_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain KCU57_00010 PF02767 DNA polymerase III beta subunit, central domain KCU57_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain KCU57_00015 PF02463 RecF/RecN/SMC N terminal domain KCU57_00020 PF00204 DNA gyrase B KCU57_00020 PF00986 DNA gyrase B subunit, carboxyl terminus KCU57_00020 PF18053 DNA gyrase B subunit insert domain KCU57_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU57_00020 PF01751 Toprim domain KCU57_00025 PF02517 CPBP intramembrane metalloprotease KCU57_00030 PF01435 Peptidase family M48 KCU57_00040 PF03544 Gram-negative bacterial TonB protein C-terminal KCU57_00045 PF01618 MotA/TolQ/ExbB proton channel family KCU57_00050 PF02472 Biopolymer transport protein ExbD/TolR KCU57_00055 PF02472 Biopolymer transport protein ExbD/TolR KCU57_00060 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ KCU57_00070 PF13091 PLD-like domain KCU57_00070 PF13396 Phospholipase_D-nuclease N-terminal KCU57_00075 PF04055 Radical SAM superfamily KCU57_00090 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain KCU57_00095 PF00155 Aminotransferase class I and II KCU57_00100 PF07715 TonB-dependent Receptor Plug Domain KCU57_00100 PF00593 TonB dependent receptor KCU57_00110 PF00158 Sigma-54 interaction domain KCU57_00110 PF01590 GAF domain KCU57_00110 PF02954 Bacterial regulatory protein, Fis family KCU57_00115 PF00171 Aldehyde dehydrogenase family KCU57_00120 PF08240 Alcohol dehydrogenase GroES-like domain KCU57_00120 PF00107 Zinc-binding dehydrogenase KCU57_00140 PF02735 Ku70/Ku80 beta-barrel domain KCU57_00145 PF04679 ATP dependent DNA ligase C terminal region KCU57_00145 PF01068 ATP dependent DNA ligase domain KCU57_00145 PF13298 DNA polymerase Ligase (LigD) KCU57_00150 PF01070 FMN-dependent dehydrogenase KCU57_00155 PF07729 FCD domain KCU57_00155 PF00392 Bacterial regulatory proteins, gntR family KCU57_00170 PF07055 Enoyl reductase FAD binding domain KCU57_00170 PF12241 Trans-2-enoyl-CoA reductase catalytic region KCU57_00170 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase KCU57_00175 PF00294 pfkB family carbohydrate kinase KCU57_00240 PF01804 Penicillin amidase KCU57_00255 PF02677 Epoxyqueuosine reductase QueH KCU57_00275 PF07715 TonB-dependent Receptor Plug Domain KCU57_00275 PF00593 TonB dependent receptor KCU57_00305 PF00135 Carboxylesterase family KCU57_00320 PF03480 Bacterial extracellular solute-binding protein, family 7 KCU57_00330 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component KCU57_00335 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain KCU57_00335 PF04616 Glycosyl hydrolases family 43 KCU57_00340 PF00356 Bacterial regulatory proteins, lacI family KCU57_00350 PF04962 KduI/IolB family KCU57_00370 PF00351 Biopterin-dependent aromatic amino acid hydroxylase KCU57_00375 PF01037 Lrp/AsnC ligand binding domain KCU57_00430 PF01734 Patatin-like phospholipase KCU57_00440 PF01569 PAP2 superfamily KCU57_00445 PF01569 PAP2 superfamily KCU57_00455 PF03741 Integral membrane protein TerC family KCU57_00460 PF17785 PUA-like domain KCU57_00460 PF10672 S-adenosylmethionine-dependent methyltransferase KCU57_00480 PF04820 Tryptophan halogenase KCU57_00490 PF02595 Glycerate kinase family KCU57_00495 PF10947 Protein of unknown function (DUF2628) KCU57_00505 PF00196 Bacterial regulatory proteins, luxR family KCU57_00505 PF00072 Response regulator receiver domain KCU57_00510 PF08447 PAS fold KCU57_00510 PF13426 PAS domain KCU57_00510 PF00989 PAS fold KCU57_00510 PF13493 Domain of unknown function (DUF4118) KCU57_00510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU57_00510 PF00512 His Kinase A (phospho-acceptor) domain KCU57_00515 PF02308 MgtC family KCU57_00530 PF02646 RmuC family KCU57_00535 PF00255 Glutathione peroxidase KCU57_00540 PF04333 MlaA lipoprotein KCU57_00555 PF02470 MlaD protein KCU57_00560 PF02405 Permease MlaE KCU57_00565 PF00005 ABC transporter KCU57_00570 PF17946 RecC C-terminal domain KCU57_00575 PF13361 UvrD-like helicase C-terminal domain KCU57_00575 PF12705 PD-(D/E)XK nuclease superfamily KCU57_00575 PF00580 UvrD/REP helicase N-terminal domain KCU57_00580 PF13538 UvrD-like helicase C-terminal domain KCU57_00600 PF01230 HIT domain KCU57_00605 PF05016 ParE toxin of type II toxin-antitoxin system, parDE KCU57_00610 PF09386 Antitoxin ParD KCU57_00665 PF08845 Toxin SymE, type I toxin-antitoxin system KCU57_00705 PF00083 Sugar (and other) transporter KCU57_00710 PF01227 GTP cyclohydrolase I KCU57_00715 PF02463 RecF/RecN/SMC N terminal domain KCU57_00745 PF01925 Sulfite exporter TauE/SafE KCU57_00750 PF02810 SEC-C motif KCU57_00760 PF13406 Transglycosylase SLT domain KCU57_00765 PF07690 Major Facilitator Superfamily KCU57_00770 PF01126 Heme oxygenase KCU57_00775 PF00360 Phytochrome region KCU57_00775 PF13426 PAS domain KCU57_00775 PF08446 PAS fold KCU57_00775 PF01590 GAF domain KCU57_00815 PF02142 MGS-like domain KCU57_00820 PF00150 Cellulase (glycosyl hydrolase family 5) KCU57_00825 PF00150 Cellulase (glycosyl hydrolase family 5) KCU57_00830 PF00150 Cellulase (glycosyl hydrolase family 5) KCU57_00835 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KCU57_00835 PF07992 Pyridine nucleotide-disulphide oxidoreductase KCU57_00840 PF00310 Glutamine amidotransferases class-II KCU57_00840 PF04898 Glutamate synthase central domain KCU57_00840 PF01645 Conserved region in glutamate synthase KCU57_00840 PF01493 GXGXG motif KCU57_00880 PF00270 DEAD/DEAH box helicase KCU57_00880 PF00271 Helicase conserved C-terminal domain KCU57_00880 PF09369 Domain of unknown function (DUF1998) KCU57_00910 PF00083 Sugar (and other) transporter KCU57_00955 PF07015 VirC1 protein KCU57_00970 PF13091 PLD-like domain KCU57_00975 PF03061 Thioesterase superfamily KCU57_00985 PF12146 Serine aminopeptidase, S33 KCU57_00995 PF01161 Phosphatidylethanolamine-binding protein KCU57_01000 PF02673 Bacitracin resistance protein BacA KCU57_01005 PF00120 Glutamine synthetase, catalytic domain KCU57_01005 PF03951 Glutamine synthetase, beta-Grasp domain KCU57_01010 PF00543 Nitrogen regulatory protein P-II KCU57_01015 PF00909 Ammonium Transporter Family KCU57_01020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU57_01020 PF00989 PAS fold KCU57_01020 PF00512 His Kinase A (phospho-acceptor) domain KCU57_01025 PF00072 Response regulator receiver domain KCU57_01025 PF00158 Sigma-54 interaction domain KCU57_01025 PF02954 Bacterial regulatory protein, Fis family KCU57_01030 PF00080 Copper/zinc superoxide dismutase (SODC) KCU57_01035 PF00080 Copper/zinc superoxide dismutase (SODC) KCU57_01045 PF00108 Thiolase, N-terminal domain KCU57_01045 PF02803 Thiolase, C-terminal domain KCU57_01085 PF02556 Preprotein translocase subunit SecB KCU57_01090 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KCU57_01090 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KCU57_01100 PF00588 SpoU rRNA Methylase family KCU57_01110 PF00675 Insulinase (Peptidase family M16) KCU57_01110 PF05193 Peptidase M16 inactive domain KCU57_01120 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KCU57_01120 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KCU57_01125 PF13784 Fic/DOC family N-terminal KCU57_01125 PF02661 Fic/DOC family KCU57_01130 PF18273 Type III R-M EcoP15I C-terminal domain KCU57_01130 PF01555 DNA methylase KCU57_01140 PF00561 alpha/beta hydrolase fold KCU57_01150 PF03692 Putative zinc- or iron-chelating domain KCU57_01155 PF00501 AMP-binding enzyme KCU57_01170 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family KCU57_01180 PF07478 D-ala D-ala ligase C-terminus KCU57_01180 PF01820 D-ala D-ala ligase N-terminus KCU57_01190 PF03109 ABC1 family KCU57_01195 PF11412 Disulphide bond corrector protein DsbC KCU57_01195 PF02683 Cytochrome C biogenesis protein transmembrane region KCU57_01200 PF00849 RNA pseudouridylate synthase KCU57_01210 PF00472 RF-1 domain KCU57_01220 PF01432 Peptidase family M3 KCU57_01240 PF03466 LysR substrate binding domain KCU57_01240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KCU57_01245 PF01274 Malate synthase KCU57_01250 PF00463 Isocitrate lyase family KCU57_01255 PF00990 Diguanylate cyclase, GGDEF domain KCU57_01285 PF00916 Sulfate permease family KCU57_01285 PF01740 STAS domain KCU57_01315 PF12146 Serine aminopeptidase, S33 KCU57_01320 PF16884 N-terminal domain of oxidoreductase KCU57_01320 PF00107 Zinc-binding dehydrogenase KCU57_01325 PF00248 Aldo/keto reductase family KCU57_01335 PF00849 RNA pseudouridylate synthase KCU57_01345 PF08482 ATP-dependent helicase C-terminal KCU57_01345 PF04408 Helicase associated domain (HA2) KCU57_01345 PF00270 DEAD/DEAH box helicase KCU57_01345 PF00271 Helicase conserved C-terminal domain KCU57_01350 PF01026 TatD related DNase KCU57_01365 PF00691 OmpA family KCU57_01365 PF04972 BON domain KCU57_01395 PF00437 Type II/IV secretion system protein KCU57_01400 PF03958 Bacterial type II/III secretion system short domain KCU57_01400 PF00263 Bacterial type II and III secretion system protein KCU57_01440 PF01061 ABC-2 type transporter KCU57_01445 PF00005 ABC transporter KCU57_01450 PF00970 Oxidoreductase FAD-binding domain KCU57_01450 PF00175 Oxidoreductase NAD-binding domain KCU57_01450 PF00111 2Fe-2S iron-sulfur cluster binding domain KCU57_01460 PF01381 Helix-turn-helix KCU57_01465 PF00561 alpha/beta hydrolase fold KCU57_01470 PF00005 ABC transporter KCU57_01485 PF03350 Uncharacterized protein family, UPF0114 KCU57_01490 PF02798 Glutathione S-transferase, N-terminal domain KCU57_01490 PF00043 Glutathione S-transferase, C-terminal domain KCU57_01495 PF00326 Prolyl oligopeptidase family KCU57_01495 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region KCU57_01520 PF00490 Delta-aminolevulinic acid dehydratase KCU57_01540 PF00175 Oxidoreductase NAD-binding domain KCU57_01540 PF00258 Flavodoxin KCU57_01540 PF00667 FAD binding domain KCU57_01545 PF04052 TolB amino-terminal domain KCU57_01545 PF07676 WD40-like Beta Propeller Repeat KCU57_01550 PF01488 Shikimate / quinate 5-dehydrogenase KCU57_01550 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KCU57_01550 PF08501 Shikimate dehydrogenase substrate binding domain KCU57_01560 PF13307 Helicase C-terminal domain KCU57_01560 PF06733 DEAD_2 KCU57_01565 PF06628 Catalase-related immune-responsive KCU57_01565 PF00199 Catalase KCU57_01580 PF00326 Prolyl oligopeptidase family KCU57_01585 PF04993 TfoX N-terminal domain KCU57_01615 PF00202 Aminotransferase class-III KCU57_01635 PF01594 AI-2E family transporter KCU57_01645 PF07995 Glucose / Sorbosone dehydrogenase KCU57_01670 PF13495 Phage integrase, N-terminal SAM-like domain KCU57_01670 PF00589 Phage integrase family KCU57_01675 PF00920 Dehydratase family KCU57_01685 PF03738 Glutathionylspermidine synthase preATP-grasp KCU57_01695 PF07726 ATPase family associated with various cellular activities (AAA) KCU57_01695 PF17863 AAA lid domain KCU57_01730 PF01037 Lrp/AsnC ligand binding domain KCU57_01740 PF07690 Major Facilitator Superfamily KCU57_01745 PF00132 Bacterial transferase hexapeptide (six repeats) KCU57_01755 PF00529 HlyD membrane-fusion protein of T1SS KCU57_01755 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KCU57_01760 PF00873 AcrB/AcrD/AcrF family KCU57_01765 PF02321 Outer membrane efflux protein KCU57_01770 PF00563 EAL domain KCU57_01770 PF00990 Diguanylate cyclase, GGDEF domain KCU57_01770 PF03707 Bacterial signalling protein N terminal repeat KCU57_01775 PF13932 GidA associated domain KCU57_01775 PF01134 Glucose inhibited division protein A KCU57_01785 PF00291 Pyridoxal-phosphate dependent enzyme KCU57_01800 PF13649 Methyltransferase domain KCU57_01810 PF12697 Alpha/beta hydrolase family KCU57_01815 PF00155 Aminotransferase class I and II KCU57_01820 PF04055 Radical SAM superfamily KCU57_01820 PF06968 Biotin and Thiamin Synthesis associated domain KCU57_01830 PF02355 Protein export membrane protein KCU57_01830 PF07549 SecD/SecF GG Motif KCU57_01835 PF01040 UbiA prenyltransferase family KCU57_01845 PF13356 Arm DNA-binding domain KCU57_01845 PF00589 Phage integrase family KCU57_01870 PF03389 MobA/MobL family KCU57_01910 PF01556 DnaJ C terminal domain KCU57_01910 PF16713 Enriched in aromatic and glycine Residues box KCU57_01910 PF00226 DnaJ domain KCU57_01915 PF01381 Helix-turn-helix KCU57_01920 PF04002 RadC-like JAB domain KCU57_01995 PF01078 Magnesium chelatase, subunit ChlI KCU57_01995 PF13335 Magnesium chelatase, subunit ChlI C-terminal KCU57_02000 PF04380 Membrane fusogenic activity KCU57_02010 PF00543 Nitrogen regulatory protein P-II KCU57_02015 PF17284 Spermidine synthase tetramerisation domain KCU57_02020 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KCU57_02020 PF17944 Arginine decarboxylase C-terminal helical extension KCU57_02020 PF17810 Arginine decarboxylase helical bundle domain KCU57_02030 PF03033 Glycosyltransferase family 28 N-terminal domain KCU57_02030 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase KCU57_02035 PF01757 Acyltransferase family KCU57_02040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KCU57_02040 PF03466 LysR substrate binding domain KCU57_02060 PF00106 short chain dehydrogenase KCU57_02070 PF03485 Arginyl tRNA synthetase N terminal domain KCU57_02070 PF00750 tRNA synthetases class I (R) KCU57_02070 PF05746 DALR anticodon binding domain KCU57_02075 PF04002 RadC-like JAB domain KCU57_02080 PF02441 Flavoprotein KCU57_02080 PF04127 DNA / pantothenate metabolism flavoprotein KCU57_02085 PF00692 dUTPase KCU57_02090 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KCU57_02090 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KCU57_02090 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KCU57_02090 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KCU57_02100 PF00156 Phosphoribosyl transferase domain KCU57_02110 PF07690 Major Facilitator Superfamily KCU57_02120 PF03702 Anhydro-N-acetylmuramic acid kinase KCU57_02125 PF01551 Peptidase family M23 KCU57_02125 PF04225 Opacity-associated protein A LysM-like domain KCU57_02130 PF00579 tRNA synthetases class I (W and Y) KCU57_02160 PF00107 Zinc-binding dehydrogenase KCU57_02160 PF08240 Alcohol dehydrogenase GroES-like domain KCU57_02165 PF04389 Peptidase family M28 KCU57_02175 PF01551 Peptidase family M23 KCU57_02180 PF13180 PDZ domain KCU57_02180 PF03572 Peptidase family S41 KCU57_02190 PF05598 Transposase domain (DUF772) KCU57_02205 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) KCU57_02215 PF01301 Glycosyl hydrolases family 35 KCU57_02220 PF13520 Amino acid permease KCU57_02225 PF01467 Cytidylyltransferase-like KCU57_02225 PF00294 pfkB family carbohydrate kinase KCU57_02230 PF11975 Family 4 glycosyl hydrolase C-terminal domain KCU57_02230 PF02056 Family 4 glycosyl hydrolase KCU57_02235 PF00171 Aldehyde dehydrogenase family KCU57_02235 PF01619 Proline dehydrogenase KCU57_02235 PF18327 Proline utilization A proline dehydrogenase N-terminal domain KCU57_02235 PF14850 DNA-binding domain of Proline dehydrogenase KCU57_02245 PF02790 Cytochrome C oxidase subunit II, transmembrane domain KCU57_02245 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KCU57_02250 PF00115 Cytochrome C and Quinol oxidase polypeptide I KCU57_02255 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 KCU57_02260 PF00510 Cytochrome c oxidase subunit III KCU57_02290 PF01040 UbiA prenyltransferase family KCU57_02300 PF13593 SBF-like CPA transporter family (DUF4137) KCU57_02305 PF10410 DnaB-helicase binding domain of primase KCU57_02305 PF08275 DNA primase catalytic core, N-terminal domain KCU57_02305 PF01807 CHC2 zinc finger KCU57_02305 PF08278 DNA primase DnaG DnaB-binding KCU57_02310 PF03631 Virulence factor BrkB KCU57_02320 PF01165 Ribosomal protein S21 KCU57_02325 PF00814 Glycoprotease family KCU57_02330 PF02152 Dihydroneopterin aldolase KCU57_02355 PF14403 Circularly permuted ATP-grasp type 2 KCU57_02365 PF14310 Fibronectin type III-like domain KCU57_02365 PF00933 Glycosyl hydrolase family 3 N terminal domain KCU57_02365 PF01915 Glycosyl hydrolase family 3 C-terminal domain KCU57_02370 PF07995 Glucose / Sorbosone dehydrogenase KCU57_02390 PF13520 Amino acid permease KCU57_02400 PF13378 Enolase C-terminal domain-like KCU57_02400 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KCU57_02410 PF00593 TonB dependent receptor KCU57_02410 PF07715 TonB-dependent Receptor Plug Domain KCU57_02440 PF01471 Putative peptidoglycan binding domain KCU57_02440 PF04717 Type VI secretion system, phage-baseplate injector KCU57_02475 PF07063 Domain of unknown function (DUF1338) KCU57_02485 PF00873 AcrB/AcrD/AcrF family KCU57_02490 PF00873 AcrB/AcrD/AcrF family KCU57_02495 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KCU57_02505 PF14489 QueF-like protein KCU57_02505 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term KCU57_02510 PF01476 LysM domain KCU57_02510 PF04972 BON domain KCU57_02520 PF09827 CRISPR associated protein Cas2 KCU57_02525 PF01867 CRISPR associated protein Cas1 KCU57_02545 PF09704 CRISPR-associated protein (Cas_Cas5) KCU57_02575 PF03971 Monomeric isocitrate dehydrogenase KCU57_02580 PF00266 Aminotransferase class-V KCU57_02585 PF00593 TonB dependent receptor KCU57_02585 PF07715 TonB-dependent Receptor Plug Domain KCU57_02590 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) KCU57_02600 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KCU57_02600 PF07497 Rho termination factor, RNA-binding domain KCU57_02600 PF07498 Rho termination factor, N-terminal domain KCU57_02605 PF00085 Thioredoxin KCU57_02610 PF00270 DEAD/DEAH box helicase KCU57_02610 PF00271 Helicase conserved C-terminal domain KCU57_02610 PF12300 ATP-dependent RNA helicase RhlB KCU57_02615 PF00005 ABC transporter KCU57_02620 PF18075 FtsX extracellular domain KCU57_02625 PF01339 CheB methylesterase KCU57_02625 PF00072 Response regulator receiver domain KCU57_02630 PF03167 Uracil DNA glycosylase superfamily KCU57_02635 PF00140 Sigma-70 factor, region 1.2 KCU57_02635 PF04542 Sigma-70 region 2 KCU57_02635 PF04545 Sigma-70, region 4 KCU57_02640 PF03458 UPF0126 domain KCU57_02645 PF07992 Pyridine nucleotide-disulphide oxidoreductase KCU57_02655 PF00271 Helicase conserved C-terminal domain KCU57_02655 PF17764 3′ DNA-binding domain (3′BD) KCU57_02655 PF18074 Primosomal protein N C-terminal domain KCU57_02655 PF18319 PriA DNA helicase Cys-rich region (CRR) domain KCU57_02655 PF00270 DEAD/DEAH box helicase KCU57_02665 PF01554 MatE KCU57_02670 PF01343 Peptidase family S49 KCU57_02695 PF01300 Telomere recombination KCU57_02700 PF13368 Topoisomerase C-terminal repeat KCU57_02700 PF01131 DNA topoisomerase KCU57_02700 PF01751 Toprim domain KCU57_02705 PF06271 RDD family KCU57_02710 PF07963 Prokaryotic N-terminal methylation motif KCU57_02710 PF00114 Pilin (bacterial filament) KCU57_02715 PF04361 Protein of unknown function (DUF494) KCU57_02720 PF02481 DNA recombination-mediator protein A KCU57_02720 PF17782 DprA winged helix domain KCU57_02725 PF01476 LysM domain KCU57_02730 PF01327 Polypeptide deformylase KCU57_02735 PF02911 Formyl transferase, C-terminal domain KCU57_02735 PF00551 Formyl transferase KCU57_02740 PF01189 16S rRNA methyltransferase RsmB/F KCU57_02740 PF01029 NusB family KCU57_02745 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase KCU57_02755 PF04932 O-Antigen ligase KCU57_02760 PF00535 Glycosyl transferase family 2 KCU57_02780 PF00925 GTP cyclohydrolase II KCU57_02795 PF02580 D-Tyr-tRNA(Tyr) deacylase KCU57_02800 PF04546 Sigma-70, non-essential region KCU57_02800 PF03979 Sigma-70 factor, region 1.1 KCU57_02800 PF00140 Sigma-70 factor, region 1.2 KCU57_02800 PF04542 Sigma-70 region 2 KCU57_02800 PF04539 Sigma-70 region 3 KCU57_02800 PF04545 Sigma-70, region 4 KCU57_02805 PF03377 TAL effector repeat KCU57_02825 PF07690 Major Facilitator Superfamily KCU57_02830 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KCU57_02830 PF00356 Bacterial regulatory proteins, lacI family KCU57_02840 PF11896 Domain of unknown function (DUF3416) KCU57_02840 PF00128 Alpha amylase, catalytic domain KCU57_02845 PF16657 Maltogenic Amylase, C-terminal domain KCU57_02845 PF00128 Alpha amylase, catalytic domain KCU57_02850 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KCU57_02850 PF00128 Alpha amylase, catalytic domain KCU57_02850 PF02806 Alpha amylase, C-terminal all-beta domain KCU57_02885 PF12697 Alpha/beta hydrolase family KCU57_02895 PF12706 Beta-lactamase superfamily domain KCU57_02900 PF00440 Bacterial regulatory proteins, tetR family KCU57_02900 PF08359 YsiA-like protein, C-terminal region KCU57_02905 PF01494 FAD binding domain KCU57_02940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KCU57_02940 PF00672 HAMP domain KCU57_02940 PF02203 Tar ligand binding domain homologue KCU57_02955 PF05067 Manganese containing catalase KCU57_02960 PF05974 Domain of unknown function (DUF892) KCU57_02965 PF05974 Domain of unknown function (DUF892) KCU57_02975 PF00563 EAL domain KCU57_02975 PF00990 Diguanylate cyclase, GGDEF domain KCU57_02975 PF03707 Bacterial signalling protein N terminal repeat KCU57_02980 PF06745 KaiC KCU57_02990 PF00440 Bacterial regulatory proteins, tetR family KCU57_02995 PF00970 Oxidoreductase FAD-binding domain KCU57_02995 PF00111 2Fe-2S iron-sulfur cluster binding domain KCU57_02995 PF00175 Oxidoreductase NAD-binding domain KCU57_03000 PF00487 Fatty acid desaturase KCU57_03010 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KCU57_03010 PF00205 Thiamine pyrophosphate enzyme, central domain KCU57_03010 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KCU57_03015 PF00512 His Kinase A (phospho-acceptor) domain KCU57_03015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU57_03020 PF00072 Response regulator receiver domain KCU57_03020 PF00158 Sigma-54 interaction domain KCU57_03020 PF02954 Bacterial regulatory protein, Fis family KCU57_03035 PF07690 Major Facilitator Superfamily KCU57_03045 PF18766 SWI2/SNF2 ATPase KCU57_03045 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) KCU57_03045 PF11867 Domain of unknown function (DUF3387) KCU57_03070 PF02384 N-6 DNA Methylase KCU57_03070 PF12161 HsdM N-terminal domain KCU57_03085 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KCU57_03085 PF14824 Sirohaem biosynthesis protein central KCU57_03085 PF10414 Sirohaem synthase dimerisation region KCU57_03090 PF01339 CheB methylesterase KCU57_03090 PF00072 Response regulator receiver domain KCU57_03095 PF00005 ABC transporter KCU57_03100 PF07690 Major Facilitator Superfamily KCU57_03105 PF18267 Rubredoxin NAD+ reductase C-terminal domain KCU57_03105 PF07992 Pyridine nucleotide-disulphide oxidoreductase KCU57_03105 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KCU57_03105 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KCU57_03105 PF04324 BFD-like [2Fe-2S] binding domain KCU57_03110 PF00355 Rieske [2Fe-2S] domain KCU57_03115 PF04324 BFD-like [2Fe-2S] binding domain KCU57_03115 PF00384 Molybdopterin oxidoreductase KCU57_03115 PF01568 Molydopterin dinucleotide binding domain KCU57_03115 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KCU57_03120 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KCU57_03125 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KCU57_03125 PF00128 Alpha amylase, catalytic domain KCU57_03135 PF00128 Alpha amylase, catalytic domain KCU57_03140 PF02446 4-alpha-glucanotransferase KCU57_03145 PF00128 Alpha amylase, catalytic domain KCU57_03145 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KCU57_03145 PF11941 Domain of unknown function (DUF3459) KCU57_03150 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KCU57_03150 PF00128 Alpha amylase, catalytic domain KCU57_03150 PF02806 Alpha amylase, C-terminal all-beta domain KCU57_03155 PF08323 Starch synthase catalytic domain KCU57_03155 PF00534 Glycosyl transferases group 1 KCU57_03165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU57_03165 PF00072 Response regulator receiver domain KCU57_03170 PF00512 His Kinase A (phospho-acceptor) domain KCU57_03170 PF08448 PAS fold KCU57_03170 PF13188 PAS domain KCU57_03170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU57_03170 PF00072 Response regulator receiver domain KCU57_03175 PF13632 Glycosyl transferase family group 2 KCU57_03185 PF04397 LytTr DNA-binding domain KCU57_03185 PF00072 Response regulator receiver domain KCU57_03190 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain KCU57_03190 PF03900 Porphobilinogen deaminase, C-terminal domain KCU57_03205 PF01638 HxlR-like helix-turn-helix KCU57_03220 PF00326 Prolyl oligopeptidase family KCU57_03220 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain KCU57_03225 PF00155 Aminotransferase class I and II KCU57_03230 PF00326 Prolyl oligopeptidase family KCU57_03230 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain KCU57_03235 PF04304 Protein of unknown function (DUF454) KCU57_03245 PF01678 Diaminopimelate epimerase KCU57_03255 PF02899 Phage integrase, N-terminal SAM-like domain KCU57_03255 PF00589 Phage integrase family KCU57_03260 PF00227 Proteasome subunit KCU57_03265 PF07724 AAA domain (Cdc48 subfamily) KCU57_03265 PF00004 ATPase family associated with various cellular activities (AAA) KCU57_03265 PF10431 C-terminal, D2-small domain, of ClpB protein KCU57_03280 PF00593 TonB dependent receptor KCU57_03280 PF07715 TonB-dependent Receptor Plug Domain KCU57_03290 PF01209 ubiE/COQ5 methyltransferase family KCU57_03305 PF11838 ERAP1-like C-terminal domain KCU57_03305 PF01433 Peptidase family M1 domain KCU57_03310 PF00561 alpha/beta hydrolase fold KCU57_03310 PF00364 Biotin-requiring enzyme KCU57_03325 PF13360 PQQ-like domain KCU57_03330 PF00497 Bacterial extracellular solute-binding proteins, family 3 KCU57_03335 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KCU57_03335 PF00034 Cytochrome c KCU57_03335 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP KCU57_03345 PF00107 Zinc-binding dehydrogenase KCU57_03345 PF08240 Alcohol dehydrogenase GroES-like domain KCU57_03360 PF00294 pfkB family carbohydrate kinase KCU57_03370 PF04085 rod shape-determining protein MreC KCU57_03380 PF03717 Penicillin-binding Protein dimerisation domain KCU57_03380 PF00905 Penicillin binding protein transpeptidase domain KCU57_03385 PF01098 Cell cycle protein KCU57_03390 PF01083 Cutinase KCU57_03395 PF00295 Glycosyl hydrolases family 28 KCU57_03400 PF13406 Transglycosylase SLT domain KCU57_03405 PF03330 Lytic transglycolase KCU57_03405 PF05036 Sporulation related domain KCU57_03410 PF00768 D-alanyl-D-alanine carboxypeptidase KCU57_03410 PF07943 Penicillin-binding protein 5, C-terminal domain KCU57_03465 PF04359 Protein of unknown function (DUF493) KCU57_03470 PF03099 Biotin/lipoate A/B protein ligase family KCU57_03475 PF04055 Radical SAM superfamily KCU57_03475 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family KCU57_03480 PF11818 C-terminal domain of tail specific protease (DUF3340) KCU57_03480 PF00595 PDZ domain KCU57_03480 PF03572 Peptidase family S41 KCU57_03480 PF17804 Tail specific protease N-terminal domain KCU57_03505 PF01467 Cytidylyltransferase-like KCU57_03505 PF00293 NUDIX domain KCU57_03525 PF08338 Domain of unknown function (DUF1731) KCU57_03525 PF01370 NAD dependent epimerase/dehydratase family KCU57_03535 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain KCU57_03535 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KCU57_03540 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KCU57_03540 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KCU57_03545 PF04972 BON domain KCU57_03555 PF00989 PAS fold KCU57_03555 PF00512 His Kinase A (phospho-acceptor) domain KCU57_03555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU57_03560 PF00072 Response regulator receiver domain KCU57_03565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU57_03565 PF00512 His Kinase A (phospho-acceptor) domain KCU57_03575 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KCU57_03595 PF03330 Lytic transglycolase KCU57_03605 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 KCU57_03605 PF16355 Domain of unknown function (DUF4982) KCU57_03605 PF00703 Glycosyl hydrolases family 2 KCU57_03605 PF02837 Glycosyl hydrolases family 2, sugar binding domain KCU57_03605 PF02836 Glycosyl hydrolases family 2, TIM barrel domain KCU57_03620 PF00392 Bacterial regulatory proteins, gntR family KCU57_03620 PF07702 UTRA domain KCU57_03625 PF07690 Major Facilitator Superfamily KCU57_03630 PF00356 Bacterial regulatory proteins, lacI family KCU57_03635 PF01380 SIS domain KCU57_03640 PF01979 Amidohydrolase family KCU57_03650 PF12627 Probable RNA and SrmB- binding site of polymerase A KCU57_03650 PF01743 Poly A polymerase head domain KCU57_03650 PF01966 HD domain KCU57_03655 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain KCU57_03655 PF01464 Transglycosylase SLT domain KCU57_03660 PF07715 TonB-dependent Receptor Plug Domain KCU57_03660 PF00593 TonB dependent receptor KCU57_03670 PF01323 DSBA-like thioredoxin domain KCU57_03675 PF01323 DSBA-like thioredoxin domain KCU57_03680 PF00034 Cytochrome c KCU57_03685 PF01926 50S ribosome-binding GTPase KCU57_03695 PF12833 Helix-turn-helix domain KCU57_03705 PF04107 Glutamate-cysteine ligase family 2(GCS2) KCU57_03720 PF00672 HAMP domain KCU57_03720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU57_03720 PF00512 His Kinase A (phospho-acceptor) domain KCU57_03720 PF16527 Two-component sensor protein CpxA, periplasmic domain KCU57_03725 PF00072 Response regulator receiver domain KCU57_03725 PF00486 Transcriptional regulatory protein, C terminal KCU57_03730 PF02583 Metal-sensitive transcriptional repressor KCU57_03735 PF08240 Alcohol dehydrogenase GroES-like domain KCU57_03735 PF00107 Zinc-binding dehydrogenase KCU57_03740 PF04828 Glutathione-dependent formaldehyde-activating enzyme KCU57_03745 PF00756 Putative esterase KCU57_03765 PF02534 Type IV secretory system Conjugative DNA transfer KCU57_03770 PF00392 Bacterial regulatory proteins, gntR family KCU57_03770 PF00155 Aminotransferase class I and II KCU57_03775 PF02567 Phenazine biosynthesis-like protein KCU57_03815 PF00449 Urease alpha-subunit, N-terminal domain KCU57_03815 PF01979 Amidohydrolase family KCU57_03820 PF01979 Amidohydrolase family KCU57_03840 PF00462 Glutaredoxin KCU57_03845 PF01522 Polysaccharide deacetylase KCU57_03865 PF00155 Aminotransferase class I and II KCU57_03870 PF03412 Peptidase C39 family KCU57_03870 PF00664 ABC transporter transmembrane region KCU57_03870 PF00005 ABC transporter KCU57_03885 PF06594 Haemolysin-type calcium binding protein related domain KCU57_03885 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) KCU57_03890 PF03193 RsgA GTPase KCU57_03905 PF00128 Alpha amylase, catalytic domain KCU57_03920 PF00356 Bacterial regulatory proteins, lacI family KCU57_03925 PF00106 short chain dehydrogenase KCU57_03930 PF03600 Citrate transporter KCU57_03940 PF00486 Transcriptional regulatory protein, C terminal KCU57_03940 PF00072 Response regulator receiver domain KCU57_03945 PF08521 Two-component sensor kinase N-terminal KCU57_03945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU57_03945 PF00512 His Kinase A (phospho-acceptor) domain KCU57_03955 PF00196 Bacterial regulatory proteins, luxR family KCU57_03955 PF00072 Response regulator receiver domain KCU57_03980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU57_03980 PF00512 His Kinase A (phospho-acceptor) domain KCU57_03990 PF00375 Sodium:dicarboxylate symporter family KCU57_03995 PF03949 Malic enzyme, NAD binding domain KCU57_03995 PF00390 Malic enzyme, N-terminal domain KCU57_03995 PF01515 Phosphate acetyl/butaryl transferase KCU57_04010 PF00529 HlyD membrane-fusion protein of T1SS KCU57_04035 PF00005 ABC transporter KCU57_04035 PF03412 Peptidase C39 family KCU57_04035 PF00664 ABC transporter transmembrane region KCU57_04060 PF03279 Bacterial lipid A biosynthesis acyltransferase KCU57_04065 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) KCU57_04070 PF02321 Outer membrane efflux protein KCU57_04085 PF00990 Diguanylate cyclase, GGDEF domain KCU57_04090 PF00180 Isocitrate/isopropylmalate dehydrogenase KCU57_04095 PF00694 Aconitase C-terminal domain KCU57_04105 PF00330 Aconitase family (aconitate hydratase) KCU57_04115 PF00682 HMGL-like KCU57_04115 PF08502 LeuA allosteric (dimerisation) domain KCU57_04120 PF00291 Pyridoxal-phosphate dependent enzyme KCU57_04130 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KCU57_04130 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KCU57_04130 PF00205 Thiamine pyrophosphate enzyme, central domain KCU57_04135 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KCU57_04135 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KCU57_04140 PF00672 HAMP domain KCU57_04140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KCU57_04140 PF02203 Tar ligand binding domain homologue KCU57_04145 PF13667 ThiC-associated domain KCU57_04145 PF01964 Radical SAM ThiC family KCU57_04160 PF00719 Inorganic pyrophosphatase KCU57_04170 PF03030 Inorganic H+ pyrophosphatase KCU57_04180 PF00365 Phosphofructokinase KCU57_04190 PF01225 Mur ligase family, catalytic domain KCU57_04190 PF02875 Mur ligase family, glutamate ligase domain KCU57_04190 PF08245 Mur ligase middle domain KCU57_04200 PF01569 PAP2 superfamily KCU57_04215 PF00480 ROK family KCU57_04225 PF00202 Aminotransferase class-III KCU57_04235 PF00202 Aminotransferase class-III KCU57_04245 PF02581 Thiamine monophosphate synthase KCU57_04250 PF00301 Rubredoxin KCU57_04260 PF13369 Transglutaminase-like superfamily KCU57_04270 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) KCU57_04280 PF01812 5-formyltetrahydrofolate cyclo-ligase family KCU57_04290 PF05164 Cell division protein ZapA KCU57_04300 PF03707 Bacterial signalling protein N terminal repeat KCU57_04300 PF00990 Diguanylate cyclase, GGDEF domain KCU57_04300 PF00563 EAL domain KCU57_04305 PF03695 Uncharacterised protein family (UPF0149) KCU57_04310 PF05195 Aminopeptidase P, N-terminal domain KCU57_04310 PF00557 Metallopeptidase family M24 KCU57_04315 PF00557 Metallopeptidase family M24 KCU57_04330 PF06969 HemN C-terminal domain KCU57_04330 PF04055 Radical SAM superfamily KCU57_04335 PF01725 Ham1 family KCU57_04340 PF03725 3' exoribonuclease family, domain 2 KCU57_04340 PF01138 3' exoribonuclease family, domain 1 KCU57_04345 PF08340 Domain of unknown function (DUF1732) KCU57_04345 PF03755 YicC-like family, N-terminal region KCU57_04350 PF00625 Guanylate kinase KCU57_04355 PF01192 RNA polymerase Rpb6 KCU57_04360 PF04607 Region found in RelA / SpoT proteins KCU57_04360 PF13291 ACT domain KCU57_04360 PF02824 TGS domain KCU57_04380 PF01042 Endoribonuclease L-PSP KCU57_04385 PF00270 DEAD/DEAH box helicase KCU57_04385 PF17191 RecG wedge domain KCU57_04385 PF00271 Helicase conserved C-terminal domain KCU57_04390 PF01156 Inosine-uridine preferring nucleoside hydrolase KCU57_04395 PF01197 Ribosomal protein L31 KCU57_04400 PF00285 Citrate synthase, C-terminal domain KCU57_04415 PF17092 Penicillin-binding protein OB-like domain KCU57_04415 PF00912 Transglycosylase KCU57_04415 PF00905 Penicillin binding protein transpeptidase domain KCU57_04420 PF11104 Type IV pilus assembly protein PilM; KCU57_04430 PF04350 Pilus assembly protein, PilO KCU57_04435 PF04351 Pilus assembly protein, PilP KCU57_04440 PF11741 AMIN domain KCU57_04440 PF00263 Bacterial type II and III secretion system protein KCU57_04440 PF03958 Bacterial type II/III secretion system short domain KCU57_04440 PF07660 Secretin and TonB N terminus short domain KCU57_04445 PF17863 AAA lid domain KCU57_04445 PF07726 ATPase family associated with various cellular activities (AAA) KCU57_04450 PF01882 Protein of unknown function DUF58 KCU57_04460 PF13519 von Willebrand factor type A domain KCU57_04475 PF00375 Sodium:dicarboxylate symporter family KCU57_04480 PF02779 Transketolase, pyrimidine binding domain KCU57_04480 PF02780 Transketolase, C-terminal domain KCU57_04480 PF00456 Transketolase, thiamine diphosphate binding domain KCU57_04510 PF04225 Opacity-associated protein A LysM-like domain KCU57_04510 PF01551 Peptidase family M23 KCU57_04515 PF01476 LysM domain KCU57_04515 PF03734 L,D-transpeptidase catalytic domain KCU57_04540 PF00005 ABC transporter KCU57_04540 PF03459 TOBE domain KCU57_04545 PF00528 Binding-protein-dependent transport system inner membrane component KCU57_04555 PF00753 Metallo-beta-lactamase superfamily KCU57_04560 PF01022 Bacterial regulatory protein, arsR family KCU57_04575 PF03922 OmpW family KCU57_04580 PF03922 OmpW family KCU57_04585 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KCU57_04585 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KCU57_04620 PF00162 Phosphoglycerate kinase KCU57_04625 PF13419 Haloacid dehalogenase-like hydrolase KCU57_04630 PF00224 Pyruvate kinase, barrel domain KCU57_04630 PF02887 Pyruvate kinase, alpha/beta domain KCU57_04635 PF00274 Fructose-bisphosphate aldolase class-I KCU57_04640 PF01661 Macro domain KCU57_04655 PF01156 Inosine-uridine preferring nucleoside hydrolase KCU57_04680 PF00266 Aminotransferase class-V KCU57_04690 PF00291 Pyridoxal-phosphate dependent enzyme KCU57_04695 PF10414 Sirohaem synthase dimerisation region KCU57_04695 PF14824 Sirohaem biosynthesis protein central KCU57_04695 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KCU57_04700 PF03466 LysR substrate binding domain KCU57_04700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KCU57_04710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU57_04710 PF00672 HAMP domain KCU57_04710 PF00512 His Kinase A (phospho-acceptor) domain KCU57_04710 PF01627 Hpt domain KCU57_04710 PF00072 Response regulator receiver domain KCU57_04715 PF03960 ArsC family KCU57_04745 PF01507 Phosphoadenosine phosphosulfate reductase family KCU57_04750 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KCU57_04750 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KCU57_04755 PF00667 FAD binding domain KCU57_04755 PF00258 Flavodoxin KCU57_04755 PF00175 Oxidoreductase NAD-binding domain KCU57_04760 PF01507 Phosphoadenosine phosphosulfate reductase family KCU57_04765 PF00009 Elongation factor Tu GTP binding domain KCU57_04770 PF02203 Tar ligand binding domain homologue KCU57_04770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KCU57_04770 PF00672 HAMP domain KCU57_04790 PF01235 Sodium:alanine symporter family KCU57_04800 PF00588 SpoU rRNA Methylase family KCU57_04800 PF08032 RNA 2'-O ribose methyltransferase substrate binding KCU57_04820 PF00356 Bacterial regulatory proteins, lacI family KCU57_04830 PF01741 Large-conductance mechanosensitive channel, MscL KCU57_04835 PF01557 Fumarylacetoacetate (FAA) hydrolase family KCU57_04850 PF02080 TrkA-C domain KCU57_04850 PF03600 Citrate transporter KCU57_04855 PF02390 Putative methyltransferase KCU57_04860 PF05690 Thiazole biosynthesis protein ThiG KCU57_04885 PF02899 Phage integrase, N-terminal SAM-like domain KCU57_04885 PF00589 Phage integrase family KCU57_04925 PF05506 Domain of unknown function (DUF756) KCU57_04925 PF04185 Phosphoesterase family KCU57_04930 PF07715 TonB-dependent Receptor Plug Domain KCU57_04930 PF00593 TonB dependent receptor KCU57_04930 PF07660 Secretin and TonB N terminus short domain KCU57_04935 PF18030 RimK PreATP-grasp domain KCU57_04935 PF08443 RimK-like ATP-grasp domain KCU57_04945 PF00486 Transcriptional regulatory protein, C terminal KCU57_04945 PF00072 Response regulator receiver domain KCU57_04950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU57_04950 PF11808 Phosphate regulon sensor protein PhoR KCU57_04950 PF00989 PAS fold KCU57_04950 PF00512 His Kinase A (phospho-acceptor) domain KCU57_04955 PF01121 Dephospho-CoA kinase KCU57_04960 PF01478 Type IV leader peptidase family KCU57_04960 PF06750 Bacterial Peptidase A24 N-terminal domain KCU57_04965 PF00482 Type II secretion system (T2SS), protein F KCU57_04970 PF07963 Prokaryotic N-terminal methylation motif KCU57_04970 PF00114 Pilin (bacterial filament) KCU57_04980 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KCU57_04980 PF00437 Type II/IV secretion system protein KCU57_04985 PF01381 Helix-turn-helix KCU57_04990 PF05973 Phage derived protein Gp49-like (DUF891) KCU57_04995 PF00158 Sigma-54 interaction domain KCU57_04995 PF00072 Response regulator receiver domain KCU57_04995 PF02954 Bacterial regulatory protein, Fis family KCU57_05000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU57_05000 PF00512 His Kinase A (phospho-acceptor) domain KCU57_05005 PF08442 ATP-grasp domain KCU57_05005 PF00549 CoA-ligase KCU57_05010 PF02629 CoA binding domain KCU57_05010 PF00549 CoA-ligase KCU57_05025 PF02540 NAD synthase KCU57_05025 PF00795 Carbon-nitrogen hydrolase KCU57_05035 PF12867 DinB superfamily KCU57_05035 PF03781 Sulfatase-modifying factor enzyme 1 KCU57_05040 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KCU57_05050 PF00528 Binding-protein-dependent transport system inner membrane component KCU57_05055 PF00005 ABC transporter KCU57_05065 PF13525 Outer membrane lipoprotein KCU57_05070 PF00849 RNA pseudouridylate synthase KCU57_05075 PF02578 Multi-copper polyphenol oxidoreductase laccase KCU57_05085 PF01011 PQQ enzyme repeat KCU57_05095 PF00982 Glycosyltransferase family 20 KCU57_05100 PF00723 Glycosyl hydrolases family 15 KCU57_05105 PF02358 Trehalose-phosphatase KCU57_05115 PF07715 TonB-dependent Receptor Plug Domain KCU57_05115 PF00593 TonB dependent receptor KCU57_05150 PF00004 ATPase family associated with various cellular activities (AAA) KCU57_05150 PF07724 AAA domain (Cdc48 subfamily) KCU57_05150 PF17871 AAA lid domain KCU57_05150 PF02861 Clp amino terminal domain, pathogenicity island component KCU57_05150 PF10431 C-terminal, D2-small domain, of ClpB protein KCU57_05165 PF01053 Cys/Met metabolism PLP-dependent enzyme KCU57_05170 PF07769 psiF repeat KCU57_05175 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KCU57_05175 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KCU57_05180 PF04183 IucA / IucC family KCU57_05180 PF06276 Ferric iron reductase FhuF-like transporter KCU57_05185 PF07690 Major Facilitator Superfamily KCU57_05190 PF06276 Ferric iron reductase FhuF-like transporter KCU57_05190 PF04183 IucA / IucC family KCU57_05200 PF07715 TonB-dependent Receptor Plug Domain KCU57_05200 PF07660 Secretin and TonB N terminus short domain KCU57_05200 PF00593 TonB dependent receptor KCU57_05210 PF00999 Sodium/hydrogen exchanger family KCU57_05210 PF02254 TrkA-N domain KCU57_05230 PF07715 TonB-dependent Receptor Plug Domain KCU57_05230 PF00593 TonB dependent receptor KCU57_05250 PF05598 Transposase domain (DUF772) KCU57_05300 PF02534 Type IV secretory system Conjugative DNA transfer KCU57_05305 PF00561 alpha/beta hydrolase fold KCU57_05320 PF00293 NUDIX domain KCU57_05325 PF01367 5'-3' exonuclease, C-terminal SAM fold KCU57_05325 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KCU57_05325 PF00476 DNA polymerase family A KCU57_05325 PF01612 3'-5' exonuclease KCU57_05355 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KCU57_05355 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KCU57_05375 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch KCU57_05380 PF02233 NAD(P) transhydrogenase beta subunit KCU57_05395 PF01063 Amino-transferase class IV KCU57_05410 PF04073 Aminoacyl-tRNA editing domain KCU57_05425 PF03358 NADPH-dependent FMN reductase KCU57_05430 PF03631 Virulence factor BrkB KCU57_05435 PF08534 Redoxin KCU57_05440 PF00708 Acylphosphatase KCU57_05445 PF03976 Polyphosphate kinase 2 (PPK2) KCU57_05455 PF00994 Probable molybdopterin binding domain KCU57_05460 PF01341 Glycosyl hydrolases family 6 KCU57_05460 PF00041 Fibronectin type III domain KCU57_05460 PF00553 Cellulose binding domain KCU57_05555 PF01301 Glycosyl hydrolases family 35 KCU57_05560 PF17678 Glycosyl hydrolase family 92 N-terminal domain KCU57_05560 PF07971 Glycosyl hydrolase family 92 KCU57_05580 PF14310 Fibronectin type III-like domain KCU57_05580 PF00933 Glycosyl hydrolase family 3 N terminal domain KCU57_05580 PF01915 Glycosyl hydrolase family 3 C-terminal domain KCU57_05580 PF07691 PA14 domain KCU57_05590 PF02838 Glycosyl hydrolase family 20, domain 2 KCU57_05590 PF00728 Glycosyl hydrolase family 20, catalytic domain KCU57_05590 PF07691 PA14 domain KCU57_05595 PF00704 Glycosyl hydrolases family 18 KCU57_05595 PF01476 LysM domain KCU57_05615 PF02685 Glucokinase KCU57_05625 PF04452 RNA methyltransferase KCU57_05630 PF00202 Aminotransferase class-III KCU57_05635 PF00293 NUDIX domain KCU57_05640 PF00459 Inositol monophosphatase family KCU57_05645 PF03819 MazG nucleotide pyrophosphohydrolase domain KCU57_05650 PF02694 Uncharacterised BCR, YnfA/UPF0060 family KCU57_05655 PF16200 C-terminal region of band_7 KCU57_05655 PF01145 SPFH domain / Band 7 family KCU57_05670 PF08669 Glycine cleavage T-protein C-terminal barrel domain KCU57_05670 PF01571 Aminomethyltransferase folate-binding domain KCU57_05675 PF01597 Glycine cleavage H-protein KCU57_05700 PF00892 EamA-like transporter family KCU57_05705 PF00732 GMC oxidoreductase KCU57_05705 PF05199 GMC oxidoreductase KCU57_05720 PF00067 Cytochrome P450 KCU57_05725 PF00067 Cytochrome P450 KCU57_05730 PF00067 Cytochrome P450 KCU57_05745 PF00067 Cytochrome P450 KCU57_05750 PF00348 Polyprenyl synthetase KCU57_05765 PF01070 FMN-dependent dehydrogenase KCU57_05770 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KCU57_05770 PF02770 Acyl-CoA dehydrogenase, middle domain KCU57_05770 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KCU57_05770 PF09317 Domain of unknown function (DUF1974) KCU57_05780 PF00440 Bacterial regulatory proteins, tetR family KCU57_05800 PF07715 TonB-dependent Receptor Plug Domain KCU57_05800 PF00593 TonB dependent receptor KCU57_05810 PF01430 Hsp33 protein KCU57_05815 PF00912 Transglycosylase KCU57_05820 PF00535 Glycosyl transferase family 2 KCU57_05825 PF00571 CBS domain KCU57_05835 PF05170 AsmA family KCU57_05840 PF03006 Haemolysin-III related KCU57_05845 PF16658 Class II release factor RF3, C-terminal domain KCU57_05845 PF00009 Elongation factor Tu GTP binding domain KCU57_05855 PF00561 alpha/beta hydrolase fold KCU57_05860 PF01053 Cys/Met metabolism PLP-dependent enzyme KCU57_05865 PF03447 Homoserine dehydrogenase, NAD binding domain KCU57_05865 PF00696 Amino acid kinase family KCU57_05865 PF00742 Homoserine dehydrogenase KCU57_05870 PF08386 TAP-like protein KCU57_05870 PF00561 alpha/beta hydrolase fold KCU57_05875 PF00990 Diguanylate cyclase, GGDEF domain KCU57_05880 PF03315 Serine dehydratase beta chain KCU57_05880 PF03313 Serine dehydratase alpha chain KCU57_05895 PF01292 Prokaryotic cytochrome b561 KCU57_05905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU57_05905 PF00512 His Kinase A (phospho-acceptor) domain KCU57_05905 PF17149 Periplasmic sensor domain found in signal transduction proteins KCU57_05905 PF01627 Hpt domain KCU57_05905 PF00072 Response regulator receiver domain KCU57_05905 PF00672 HAMP domain KCU57_05910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU57_05910 PF00672 HAMP domain KCU57_05910 PF17149 Periplasmic sensor domain found in signal transduction proteins KCU57_05910 PF01627 Hpt domain KCU57_05910 PF00072 Response regulator receiver domain KCU57_05910 PF00512 His Kinase A (phospho-acceptor) domain KCU57_05915 PF07690 Major Facilitator Superfamily KCU57_05920 PF01208 Uroporphyrinogen decarboxylase (URO-D) KCU57_05930 PF13533 Biotin-lipoyl like KCU57_05935 PF00873 AcrB/AcrD/AcrF family KCU57_05940 PF02321 Outer membrane efflux protein KCU57_05945 PF01761 3-dehydroquinate synthase KCU57_05950 PF01202 Shikimate kinase KCU57_05955 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region KCU57_05955 PF01243 Pyridoxamine 5'-phosphate oxidase KCU57_05960 PF00583 Acetyltransferase (GNAT) family KCU57_05975 PF00376 MerR family regulatory protein KCU57_05975 PF09278 MerR, DNA binding KCU57_05985 PF14748 Pyrroline-5-carboxylate reductase dimerisation KCU57_05985 PF03807 NADP oxidoreductase coenzyme F420-dependent KCU57_05995 PF01168 Alanine racemase, N-terminal domain KCU57_06000 PF00437 Type II/IV secretion system protein KCU57_06005 PF00437 Type II/IV secretion system protein KCU57_06020 PF02622 Uncharacterized ACR, COG1678 KCU57_06025 PF03652 Holliday junction resolvase KCU57_06030 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KCU57_06030 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KCU57_06045 PF02203 Tar ligand binding domain homologue KCU57_06045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KCU57_06045 PF00672 HAMP domain KCU57_06055 PF00324 Amino acid permease KCU57_06060 PF03600 Citrate transporter KCU57_06075 PF00571 CBS domain KCU57_06075 PF01769 Divalent cation transporter KCU57_06075 PF03448 MgtE intracellular N domain KCU57_06080 PF00391 PEP-utilising enzyme, mobile domain KCU57_06080 PF05524 PEP-utilising enzyme, N-terminal KCU57_06080 PF02896 PEP-utilising enzyme, TIM barrel domain KCU57_06085 PF00381 PTS HPr component phosphorylation site KCU57_06095 PF03668 P-loop ATPase protein family KCU57_06100 PF07475 HPr Serine kinase C-terminal domain KCU57_06100 PF02603 HPr Serine kinase N terminus KCU57_06105 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KCU57_06110 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KCU57_06115 PF04963 Sigma-54 factor, core binding domain KCU57_06115 PF04552 Sigma-54, DNA binding domain KCU57_06115 PF00309 Sigma-54 factor, Activator interacting domain (AID) KCU57_06120 PF00005 ABC transporter KCU57_06140 PF00571 CBS domain KCU57_06140 PF01380 SIS domain KCU57_06150 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KCU57_06180 PF00551 Formyl transferase KCU57_06195 PF00586 AIR synthase related protein, N-terminal domain KCU57_06195 PF02769 AIR synthase related protein, C-terminal domain KCU57_06205 PF01594 AI-2E family transporter KCU57_06210 PF00308 Bacterial dnaA protein KCU57_06215 PF00483 Nucleotidyl transferase KCU57_06220 PF01636 Phosphotransferase enzyme family KCU57_06245 PF00486 Transcriptional regulatory protein, C terminal KCU57_06245 PF00072 Response regulator receiver domain KCU57_06255 PF00667 FAD binding domain KCU57_06255 PF00258 Flavodoxin KCU57_06255 PF00175 Oxidoreductase NAD-binding domain KCU57_06260 PF02424 ApbE family KCU57_06280 PF18331 PKHD-type hydroxylase C-terminal domain KCU57_06280 PF13640 2OG-Fe(II) oxygenase superfamily KCU57_06285 PF07715 TonB-dependent Receptor Plug Domain KCU57_06285 PF00593 TonB dependent receptor KCU57_06290 PF00355 Rieske [2Fe-2S] domain KCU57_06300 PF00266 Aminotransferase class-V KCU57_06305 PF01458 Uncharacterized protein family (UPF0051) KCU57_06310 PF00005 ABC transporter KCU57_06315 PF01458 Uncharacterized protein family (UPF0051) KCU57_06330 PF01965 DJ-1/PfpI family KCU57_06345 PF01476 LysM domain KCU57_06345 PF08525 Opacity-associated protein A N-terminal motif KCU57_06345 PF01551 Peptidase family M23 KCU57_06360 PF02566 OsmC-like protein KCU57_06370 PF02567 Phenazine biosynthesis-like protein KCU57_06375 PF00696 Amino acid kinase family KCU57_06375 PF01842 ACT domain KCU57_06390 PF08245 Mur ligase middle domain KCU57_06400 PF00348 Polyprenyl synthetase KCU57_06405 PF00436 Single-strand binding protein family KCU57_06410 PF07804 HipA-like C-terminal domain KCU57_06410 PF13657 HipA N-terminal domain KCU57_06425 PF00854 POT family KCU57_06430 PF03169 OPT oligopeptide transporter protein KCU57_06435 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region KCU57_06435 PF07676 WD40-like Beta Propeller Repeat KCU57_06435 PF00326 Prolyl oligopeptidase family KCU57_06460 PF13419 Haloacid dehalogenase-like hydrolase KCU57_06465 PF04328 Selenoprotein, putative KCU57_06470 PF02554 Carbon starvation protein CstA KCU57_06470 PF13722 5TM C-terminal transporter carbon starvation CstA KCU57_06490 PF04493 Endonuclease V KCU57_06495 PF00300 Histidine phosphatase superfamily (branch 1) KCU57_06505 PF07944 Beta-L-arabinofuranosidase, GH127 KCU57_06515 PF02311 AraC-like ligand binding domain KCU57_06515 PF12833 Helix-turn-helix domain KCU57_06520 PF13276 HTH-like domain KCU57_06520 PF00665 Integrase core domain KCU57_06520 PF13333 Integrase core domain KCU57_06530 PF00072 Response regulator receiver domain KCU57_06530 PF01339 CheB methylesterase KCU57_06535 PF01739 CheR methyltransferase, SAM binding domain KCU57_06535 PF03705 CheR methyltransferase, all-alpha domain KCU57_06540 PF00563 EAL domain KCU57_06540 PF00990 Diguanylate cyclase, GGDEF domain KCU57_06540 PF00360 Phytochrome region KCU57_06540 PF01590 GAF domain KCU57_06545 PF01584 CheW-like domain KCU57_06550 PF12729 Four helix bundle sensory module for signal transduction KCU57_06550 PF00672 HAMP domain KCU57_06550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KCU57_06555 PF00672 HAMP domain KCU57_06555 PF02203 Tar ligand binding domain homologue KCU57_06555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KCU57_06560 PF02203 Tar ligand binding domain homologue KCU57_06560 PF00672 HAMP domain KCU57_06560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KCU57_06565 PF01627 Hpt domain KCU57_06565 PF02895 Signal transducing histidine kinase, homodimeric domain KCU57_06565 PF01584 CheW-like domain KCU57_06565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU57_06575 PF02559 CarD-like/TRCF domain KCU57_06575 PF00270 DEAD/DEAH box helicase KCU57_06575 PF00271 Helicase conserved C-terminal domain KCU57_06575 PF17757 UvrB interaction domain KCU57_06575 PF03461 TRCF domain KCU57_06595 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ KCU57_06605 PF00672 HAMP domain KCU57_06605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU57_06605 PF00512 His Kinase A (phospho-acceptor) domain KCU57_06635 PF00749 tRNA synthetases class I (E and Q), catalytic domain KCU57_06640 PF01475 Ferric uptake regulator family KCU57_06645 PF07690 Major Facilitator Superfamily KCU57_06660 PF00561 alpha/beta hydrolase fold KCU57_06670 PF12804 MobA-like NTP transferase domain KCU57_06675 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain KCU57_06675 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase KCU57_06680 PF03450 CO dehydrogenase flavoprotein C-terminal domain KCU57_06680 PF00941 FAD binding domain in molybdopterin dehydrogenase KCU57_06685 PF00111 2Fe-2S iron-sulfur cluster binding domain KCU57_06685 PF01799 [2Fe-2S] binding domain KCU57_06685 PF10518 TAT (twin-arginine translocation) pathway signal sequence KCU57_06700 PF07715 TonB-dependent Receptor Plug Domain KCU57_06700 PF00593 TonB dependent receptor KCU57_06715 PF00107 Zinc-binding dehydrogenase KCU57_06715 PF08240 Alcohol dehydrogenase GroES-like domain KCU57_06720 PF00654 Voltage gated chloride channel KCU57_06730 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KCU57_06730 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KCU57_06735 PF12833 Helix-turn-helix domain KCU57_06735 PF00730 HhH-GPD superfamily base excision DNA repair protein KCU57_06735 PF06029 AlkA N-terminal domain KCU57_06735 PF02805 Metal binding domain of Ada KCU57_06770 PF01494 FAD binding domain KCU57_06790 PF00270 DEAD/DEAH box helicase KCU57_06790 PF00271 Helicase conserved C-terminal domain KCU57_06790 PF03880 DbpA RNA binding domain KCU57_06795 PF00849 RNA pseudouridylate synthase KCU57_06795 PF01479 S4 domain KCU57_06800 PF00990 Diguanylate cyclase, GGDEF domain KCU57_06810 PF03812 2-keto-3-deoxygluconate permease KCU57_06820 PF03737 Aldolase/RraA KCU57_06825 PF00144 Beta-lactamase KCU57_06840 PF00664 ABC transporter transmembrane region KCU57_06840 PF00005 ABC transporter KCU57_06860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KCU57_06860 PF03466 LysR substrate binding domain KCU57_06895 PF03653 Uncharacterised protein family (UPF0093) KCU57_06905 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit KCU57_06910 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KCU57_06910 PF14579 Helix-hairpin-helix motif KCU57_06910 PF02811 PHP domain KCU57_06910 PF01336 OB-fold nucleic acid binding domain KCU57_06910 PF07733 Bacterial DNA polymerase III alpha NTPase domain KCU57_06915 PF01351 Ribonuclease HII KCU57_06920 PF02684 Lipid-A-disaccharide synthetase KCU57_06925 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 KCU57_06925 PF00132 Bacterial transferase hexapeptide (six repeats) KCU57_06930 PF07977 FabA-like domain KCU57_06935 PF00132 Bacterial transferase hexapeptide (six repeats) KCU57_06935 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD KCU57_06940 PF07244 Surface antigen variable number repeat KCU57_06940 PF01103 Surface antigen KCU57_06945 PF17820 PDZ domain KCU57_06945 PF02163 Peptidase family M50 KCU57_06950 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KCU57_06950 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KCU57_06950 PF13288 DXP reductoisomerase C-terminal domain KCU57_06960 PF01255 Putative undecaprenyl diphosphate synthase KCU57_06965 PF01765 Ribosome recycling factor KCU57_06970 PF00696 Amino acid kinase family KCU57_06975 PF00990 Diguanylate cyclase, GGDEF domain KCU57_06980 PF00889 Elongation factor TS KCU57_06985 PF00318 Ribosomal protein S2 KCU57_07020 PF00557 Metallopeptidase family M24 KCU57_07025 PF08335 GlnD PII-uridylyltransferase KCU57_07025 PF01966 HD domain KCU57_07025 PF01909 Nucleotidyltransferase domain KCU57_07030 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal KCU57_07030 PF14602 Hexapeptide repeat of succinyl-transferase KCU57_07030 PF00132 Bacterial transferase hexapeptide (six repeats) KCU57_07035 PF03960 ArsC family KCU57_07040 PF07687 Peptidase dimerisation domain KCU57_07040 PF01546 Peptidase family M20/M25/M40 KCU57_07050 PF00733 Asparagine synthase KCU57_07050 PF13537 Glutamine amidotransferase domain KCU57_07060 PF01804 Penicillin amidase KCU57_07065 PF00210 Ferritin-like domain KCU57_07070 PF00521 DNA gyrase/topoisomerase IV, subunit A KCU57_07070 PF03989 DNA gyrase C-terminal domain, beta-propeller KCU57_07085 PF02321 Outer membrane efflux protein KCU57_07090 PF00529 HlyD membrane-fusion protein of T1SS KCU57_07090 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KCU57_07095 PF07690 Major Facilitator Superfamily KCU57_07120 PF06903 VirK protein KCU57_07130 PF08461 Ribonuclease R winged-helix domain KCU57_07130 PF08206 Ribonuclease B OB domain KCU57_07130 PF17876 Cold shock domain KCU57_07130 PF00575 S1 RNA binding domain KCU57_07130 PF00773 RNB domain KCU57_07140 PF00588 SpoU rRNA Methylase family KCU57_07140 PF08032 RNA 2'-O ribose methyltransferase substrate binding KCU57_07150 PF00929 Exonuclease KCU57_07160 PF05114 Protein of unknown function (DUF692) KCU57_07170 PF01895 PhoU domain KCU57_07175 PF00005 ABC transporter KCU57_07180 PF00528 Binding-protein-dependent transport system inner membrane component KCU57_07185 PF00528 Binding-protein-dependent transport system inner membrane component KCU57_07190 PF12849 PBP superfamily domain KCU57_07195 PF12849 PBP superfamily domain KCU57_07200 PF07396 Phosphate-selective porin O and P KCU57_07210 PF00484 Carbonic anhydrase KCU57_07215 PF01740 STAS domain KCU57_07215 PF00916 Sulfate permease family KCU57_07220 PF00730 HhH-GPD superfamily base excision DNA repair protein KCU57_07220 PF00633 Helix-hairpin-helix motif KCU57_07220 PF10576 Iron-sulfur binding domain of endonuclease III KCU57_07230 PF00378 Enoyl-CoA hydratase/isomerase KCU57_07235 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KCU57_07235 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KCU57_07240 PF00293 NUDIX domain KCU57_07245 PF00581 Rhodanese-like domain KCU57_07275 PF01170 Putative RNA methylase family UPF0020 KCU57_07275 PF10672 S-adenosylmethionine-dependent methyltransferase KCU57_07275 PF02926 THUMP domain KCU57_07280 PF00072 Response regulator receiver domain KCU57_07285 PF00072 Response regulator receiver domain KCU57_07285 PF01627 Hpt domain KCU57_07285 PF00512 His Kinase A (phospho-acceptor) domain KCU57_07285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU57_07285 PF00672 HAMP domain KCU57_07285 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KCU57_07290 PF04286 Protein of unknown function (DUF445) KCU57_07305 PF00171 Aldehyde dehydrogenase family KCU57_07310 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KCU57_07310 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KCU57_07315 PF00202 Aminotransferase class-III KCU57_07320 PF01381 Helix-turn-helix KCU57_07320 PF07883 Cupin domain KCU57_07325 PF00171 Aldehyde dehydrogenase family KCU57_07350 PF07690 Major Facilitator Superfamily KCU57_07355 PF02634 FdhD/NarQ family KCU57_07360 PF00384 Molybdopterin oxidoreductase KCU57_07375 PF00818 Ice nucleation protein repeat KCU57_07375 PF00818 Ice nucleation protein repeat KCU57_07380 PF07690 Major Facilitator Superfamily KCU57_07380 PF00083 Sugar (and other) transporter KCU57_07385 PF17151 Periplasmic sensor domain KCU57_07385 PF00990 Diguanylate cyclase, GGDEF domain KCU57_07390 PF01266 FAD dependent oxidoreductase KCU57_07395 PF00120 Glutamine synthetase, catalytic domain KCU57_07400 PF07722 Peptidase C26 KCU57_07405 PF00120 Glutamine synthetase, catalytic domain KCU57_07410 PF00202 Aminotransferase class-III KCU57_07415 PF13416 Bacterial extracellular solute-binding protein KCU57_07420 PF13416 Bacterial extracellular solute-binding protein KCU57_07425 PF13533 Biotin-lipoyl like KCU57_07430 PF07690 Major Facilitator Superfamily KCU57_07435 PF02321 Outer membrane efflux protein KCU57_07440 PF08402 TOBE domain KCU57_07440 PF00005 ABC transporter KCU57_07445 PF00528 Binding-protein-dependent transport system inner membrane component KCU57_07450 PF00528 Binding-protein-dependent transport system inner membrane component KCU57_07455 PF00171 Aldehyde dehydrogenase family KCU57_07470 PF00571 CBS domain KCU57_07470 PF03471 Transporter associated domain KCU57_07480 PF02130 Uncharacterized protein family UPF0054 KCU57_07485 PF02562 PhoH-like protein KCU57_07490 PF04055 Radical SAM superfamily KCU57_07490 PF01938 TRAM domain KCU57_07490 PF00919 Uncharacterized protein family UPF0004 KCU57_07495 PF00043 Glutathione S-transferase, C-terminal domain KCU57_07495 PF02798 Glutathione S-transferase, N-terminal domain KCU57_07500 PF01464 Transglycosylase SLT domain KCU57_07505 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal KCU57_07505 PF00355 Rieske [2Fe-2S] domain KCU57_07510 PF00032 Cytochrome b(C-terminal)/b6/petD KCU57_07510 PF00033 Cytochrome b/b6/petB KCU57_07520 PF02167 Cytochrome C1 family KCU57_07525 PF00043 Glutathione S-transferase, C-terminal domain KCU57_07525 PF02798 Glutathione S-transferase, N-terminal domain KCU57_07530 PF04386 Stringent starvation protein B KCU57_07545 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain KCU57_07545 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain KCU57_07555 PF00731 AIR carboxylase KCU57_07560 PF02222 ATP-grasp domain KCU57_07560 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain KCU57_07565 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KCU57_07565 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KCU57_07570 PF00462 Glutaredoxin KCU57_07575 PF00106 short chain dehydrogenase KCU57_07580 PF01914 MarC family integral membrane protein KCU57_07585 PF00593 TonB dependent receptor KCU57_07590 PF11892 Domain of unknown function (DUF3412) KCU57_07590 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases KCU57_07590 PF03641 Possible lysine decarboxylase KCU57_07595 PF06580 Histidine kinase KCU57_07595 PF07694 5TMR of 5TMR-LYT KCU57_07600 PF07963 Prokaryotic N-terminal methylation motif KCU57_07600 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor KCU57_07620 PF05567 Neisseria PilC beta-propeller domain KCU57_07625 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor KCU57_07625 PF07963 Prokaryotic N-terminal methylation motif KCU57_07635 PF07963 Prokaryotic N-terminal methylation motif KCU57_07635 PF00114 Pilin (bacterial filament) KCU57_07640 PF12344 Ultra-violet resistance protein B KCU57_07640 PF00271 Helicase conserved C-terminal domain KCU57_07640 PF04851 Type III restriction enzyme, res subunit KCU57_07640 PF02151 UvrB/uvrC motif KCU57_07640 PF17757 UvrB interaction domain KCU57_07665 PF04335 VirB8 protein KCU57_07675 PF03743 Bacterial conjugation TrbI-like protein KCU57_07680 PF00437 Type II/IV secretion system protein KCU57_07685 PF01464 Transglycosylase SLT domain KCU57_07695 PF05101 Type IV secretory pathway, VirB3-like protein KCU57_07700 PF03135 CagE, TrbE, VirB family, component of type IV transporter system KCU57_07735 PF05598 Transposase domain (DUF772) KCU57_07760 PF03129 Anticodon binding domain KCU57_07760 PF02824 TGS domain KCU57_07760 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KCU57_07760 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KCU57_07765 PF00707 Translation initiation factor IF-3, C-terminal domain KCU57_07765 PF05198 Translation initiation factor IF-3, N-terminal domain KCU57_07770 PF01632 Ribosomal protein L35 KCU57_07775 PF00453 Ribosomal protein L20 KCU57_07780 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KCU57_07780 PF01409 tRNA synthetases class II core domain (F) KCU57_07785 PF03483 B3/4 domain KCU57_07785 PF03484 tRNA synthetase B5 domain KCU57_07785 PF03147 Ferredoxin-fold anticodon binding domain KCU57_07785 PF01588 Putative tRNA binding domain KCU57_07785 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KCU57_07790 PF00216 Bacterial DNA-binding protein KCU57_07795 PF13411 MerR HTH family regulatory protein KCU57_07815 PF02397 Bacterial sugar transferase KCU57_07830 PF00534 Glycosyl transferases group 1 KCU57_07830 PF13439 Glycosyltransferase Family 4 KCU57_07840 PF14667 Polysaccharide biosynthesis C-terminal domain KCU57_07855 PF03808 Glycosyl transferase WecB/TagA/CpsF family KCU57_07865 PF13292 1-deoxy-D-xylulose-5-phosphate synthase KCU57_07865 PF02779 Transketolase, pyrimidine binding domain KCU57_07865 PF02780 Transketolase, C-terminal domain KCU57_07875 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KCU57_07875 PF12806 Acetyl-CoA dehydrogenase C-terminal like KCU57_07875 PF02770 Acyl-CoA dehydrogenase, middle domain KCU57_07875 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KCU57_07915 PF02601 Exonuclease VII, large subunit KCU57_07915 PF13742 OB-fold nucleic acid binding domain KCU57_07920 PF08331 Domain of unknown function (DUF1730) KCU57_07925 PF01256 Carbohydrate kinase KCU57_07925 PF03853 YjeF-related protein N-terminus KCU57_07930 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE KCU57_07935 PF11741 AMIN domain KCU57_07935 PF01520 N-acetylmuramoyl-L-alanine amidase KCU57_07940 PF08676 MutL C terminal dimerisation domain KCU57_07940 PF01119 DNA mismatch repair protein, C-terminal domain KCU57_07955 PF07879 PHB/PHA accumulation regulator DNA-binding domain KCU57_07955 PF05233 PHB accumulation regulatory domain KCU57_07960 PF00106 short chain dehydrogenase KCU57_07965 PF00749 tRNA synthetases class I (E and Q), catalytic domain KCU57_07970 PF01435 Peptidase family M48 KCU57_07975 PF00072 Response regulator receiver domain KCU57_07975 PF00990 Diguanylate cyclase, GGDEF domain KCU57_07975 PF00563 EAL domain KCU57_07985 PF07152 YaeQ protein KCU57_07990 PF00849 RNA pseudouridylate synthase KCU57_07995 PF00313 'Cold-shock' DNA-binding domain KCU57_08000 PF02798 Glutathione S-transferase, N-terminal domain KCU57_08000 PF00043 Glutathione S-transferase, C-terminal domain KCU57_08005 PF07859 alpha/beta hydrolase fold KCU57_08010 PF02696 Uncharacterized ACR, YdiU/UPF0061 family KCU57_08020 PF00529 HlyD membrane-fusion protein of T1SS KCU57_08020 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KCU57_08025 PF00873 AcrB/AcrD/AcrF family KCU57_08030 PF00156 Phosphoribosyl transferase domain KCU57_08035 PF03880 DbpA RNA binding domain KCU57_08035 PF00270 DEAD/DEAH box helicase KCU57_08035 PF00271 Helicase conserved C-terminal domain KCU57_08040 PF00005 ABC transporter KCU57_08040 PF16326 ABC transporter C-terminal domain KCU57_08040 PF12848 ABC transporter KCU57_08050 PF00545 ribonuclease KCU57_08055 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KCU57_08055 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KCU57_08065 PF01915 Glycosyl hydrolase family 3 C-terminal domain KCU57_08065 PF00933 Glycosyl hydrolase family 3 N terminal domain KCU57_08065 PF14310 Fibronectin type III-like domain KCU57_08075 PF00854 POT family KCU57_08105 PF01047 MarR family KCU57_08120 PF00255 Glutathione peroxidase KCU57_08125 PF00970 Oxidoreductase FAD-binding domain KCU57_08125 PF00175 Oxidoreductase NAD-binding domain KCU57_08135 PF00005 ABC transporter KCU57_08155 PF05683 Fumarase C-terminus KCU57_08155 PF05681 Fumarate hydratase (Fumerase) KCU57_08165 PF02253 Phospholipase A1 KCU57_08175 PF00313 'Cold-shock' DNA-binding domain KCU57_08190 PF00899 ThiF family KCU57_08195 PF01026 TatD related DNase KCU57_08210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KCU57_08210 PF02770 Acyl-CoA dehydrogenase, middle domain KCU57_08210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KCU57_08215 PF03358 NADPH-dependent FMN reductase KCU57_08220 PF00772 DnaB-like helicase N terminal domain KCU57_08220 PF03796 DnaB-like helicase C terminal domain KCU57_08225 PF00875 DNA photolyase KCU57_08225 PF03441 FAD binding domain of DNA photolyase KCU57_08230 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain KCU57_08230 PF06974 Protein of unknown function (DUF1298) KCU57_08235 PF05736 OprF membrane domain KCU57_08235 PF00691 OmpA family KCU57_08240 PF03466 LysR substrate binding domain KCU57_08240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KCU57_08255 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KCU57_08255 PF00529 HlyD membrane-fusion protein of T1SS KCU57_08260 PF00873 AcrB/AcrD/AcrF family KCU57_08265 PF00106 short chain dehydrogenase KCU57_08270 PF02321 Outer membrane efflux protein KCU57_08285 PF05598 Transposase domain (DUF772) KCU57_08300 PF01668 SmpB protein KCU57_08305 PF03364 Polyketide cyclase / dehydrase and lipid transport KCU57_08310 PF03658 RnfH family Ubiquitin KCU57_08315 PF04355 SmpA / OmlA family KCU57_08320 PF01475 Ferric uptake regulator family KCU57_08325 PF02463 RecF/RecN/SMC N terminal domain KCU57_08330 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding KCU57_08330 PF01628 HrcA protein C terminal domain KCU57_08335 PF01025 GrpE KCU57_08340 PF00012 Hsp70 protein KCU57_08345 PF00226 DnaJ domain KCU57_08345 PF01556 DnaJ C terminal domain KCU57_08345 PF00684 DnaJ central domain KCU57_08350 PF08543 Phosphomethylpyrimidine kinase KCU57_08355 PF01817 Chorismate mutase type II KCU57_08355 PF02153 Prephenate dehydrogenase KCU57_08365 PF00664 ABC transporter transmembrane region KCU57_08365 PF00005 ABC transporter KCU57_08370 PF01205 Uncharacterized protein family UPF0029 KCU57_08380 PF04542 Sigma-70 region 2 KCU57_08380 PF08281 Sigma-70, region 4 KCU57_08385 PF00563 EAL domain KCU57_08385 PF03707 Bacterial signalling protein N terminal repeat KCU57_08385 PF00990 Diguanylate cyclase, GGDEF domain KCU57_08390 PF03641 Possible lysine decarboxylase KCU57_08395 PF07992 Pyridine nucleotide-disulphide oxidoreductase KCU57_08395 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KCU57_08400 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KCU57_08400 PF00364 Biotin-requiring enzyme KCU57_08400 PF02817 e3 binding domain KCU57_08405 PF02779 Transketolase, pyrimidine binding domain KCU57_08405 PF16870 2-oxoglutarate dehydrogenase C-terminal KCU57_08405 PF00676 Dehydrogenase E1 component KCU57_08405 PF16078 2-oxoglutarate dehydrogenase N-terminus KCU57_08415 PF08007 Cupin superfamily protein KCU57_08420 PF00223 Photosystem I psaA/psaB protein KCU57_08420 PF00691 OmpA family KCU57_08430 PF08328 Adenylosuccinate lyase C-terminal KCU57_08430 PF00206 Lyase KCU57_08440 PF10415 Fumarase C C-terminus KCU57_08440 PF00206 Lyase KCU57_08465 PF00005 ABC transporter KCU57_08470 PF00392 Bacterial regulatory proteins, gntR family KCU57_08480 PF00255 Glutathione peroxidase KCU57_08485 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KCU57_08485 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KCU57_08490 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KCU57_08490 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KCU57_08490 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KCU57_08495 PF04102 SlyX KCU57_08515 PF00809 Pterin binding enzyme KCU57_08515 PF02310 B12 binding domain KCU57_08515 PF02574 Homocysteine S-methyltransferase KCU57_08515 PF02607 B12 binding domain KCU57_08515 PF02965 Vitamin B12 dependent methionine synthase, activation domain KCU57_08520 PF00809 Pterin binding enzyme KCU57_08520 PF02574 Homocysteine S-methyltransferase KCU57_08525 PF01209 ubiE/COQ5 methyltransferase family KCU57_08530 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KCU57_08530 PF02770 Acyl-CoA dehydrogenase, middle domain KCU57_08530 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KCU57_08540 PF00873 AcrB/AcrD/AcrF family KCU57_08545 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KCU57_08545 PF00529 HlyD membrane-fusion protein of T1SS KCU57_08555 PF05088 Bacterial NAD-glutamate dehydrogenase KCU57_08570 PF03377 TAL effector repeat KCU57_08585 PF01513 ATP-NAD kinase KCU57_08610 PF08411 Exonuclease C-terminal KCU57_08610 PF00929 Exonuclease KCU57_08615 PF01494 FAD binding domain KCU57_08620 PF00266 Aminotransferase class-V KCU57_08630 PF06052 3-hydroxyanthranilic acid dioxygenase KCU57_08635 PF00484 Carbonic anhydrase KCU57_08680 PF00072 Response regulator receiver domain KCU57_08680 PF00196 Bacterial regulatory proteins, luxR family KCU57_08700 PF00152 tRNA synthetases class II (D, K and N) KCU57_08700 PF01336 OB-fold nucleic acid binding domain KCU57_08705 PF01521 Iron-sulphur cluster biosynthesis KCU57_08715 PF01250 Ribosomal protein S6 KCU57_08720 PF01084 Ribosomal protein S18 KCU57_08725 PF01281 Ribosomal protein L9, N-terminal domain KCU57_08725 PF03948 Ribosomal protein L9, C-terminal domain KCU57_08730 PF02463 RecF/RecN/SMC N terminal domain KCU57_08735 PF04354 ZipA, C-terminal FtsZ-binding domain KCU57_08740 PF00155 Aminotransferase class I and II KCU57_08745 PF12826 Helix-hairpin-helix motif KCU57_08745 PF01653 NAD-dependent DNA ligase adenylation domain KCU57_08745 PF03120 NAD-dependent DNA ligase OB-fold domain KCU57_08745 PF00533 BRCA1 C Terminus (BRCT) domain KCU57_08745 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KCU57_08750 PF00152 tRNA synthetases class II (D, K and N) KCU57_08760 PF01008 Initiation factor 2 subunit family KCU57_08765 PF00521 DNA gyrase/topoisomerase IV, subunit A KCU57_08765 PF03989 DNA gyrase C-terminal domain, beta-propeller KCU57_08780 PF00440 Bacterial regulatory proteins, tetR family KCU57_08780 PF08360 QacR-like protein, C-terminal region KCU57_08795 PF01175 Urocanase Rossmann-like domain KCU57_08795 PF17392 Urocanase C-terminal domain KCU57_08795 PF17391 Urocanase N-terminal domain KCU57_08805 PF00221 Aromatic amino acid lyase KCU57_08810 PF07969 Amidohydrolase family KCU57_08825 PF00106 short chain dehydrogenase KCU57_08860 PF01794 Ferric reductase like transmembrane component KCU57_08865 PF00174 Oxidoreductase molybdopterin binding domain KCU57_08870 PF00266 Aminotransferase class-V KCU57_08875 PF01842 ACT domain KCU57_08875 PF00800 Prephenate dehydratase KCU57_08875 PF01817 Chorismate mutase type II KCU57_08880 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KCU57_08890 PF03544 Gram-negative bacterial TonB protein C-terminal KCU57_08895 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KCU57_08895 PF02403 Seryl-tRNA synthetase N-terminal domain KCU57_08900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KCU57_08900 PF03466 LysR substrate binding domain KCU57_08915 PF05598 Transposase domain (DUF772) KCU57_08975 PF00005 ABC transporter KCU57_08975 PF02687 FtsX-like permease family KCU57_08975 PF12704 MacB-like periplasmic core domain KCU57_08990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU57_08990 PF00512 His Kinase A (phospho-acceptor) domain KCU57_08995 PF00072 Response regulator receiver domain KCU57_08995 PF00486 Transcriptional regulatory protein, C terminal KCU57_09005 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KCU57_09010 PF00294 pfkB family carbohydrate kinase KCU57_09015 PF02896 PEP-utilising enzyme, TIM barrel domain KCU57_09015 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KCU57_09015 PF00381 PTS HPr component phosphorylation site KCU57_09015 PF00391 PEP-utilising enzyme, mobile domain KCU57_09015 PF05524 PEP-utilising enzyme, N-terminal KCU57_09020 PF00356 Bacterial regulatory proteins, lacI family KCU57_09030 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KCU57_09030 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KCU57_09030 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KCU57_09040 PF00563 EAL domain KCU57_09040 PF03707 Bacterial signalling protein N terminal repeat KCU57_09040 PF00990 Diguanylate cyclase, GGDEF domain KCU57_09050 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KCU57_09060 PF00581 Rhodanese-like domain KCU57_09060 PF17773 UPF0176 acylphosphatase like domain KCU57_09070 PF00296 Luciferase-like monooxygenase KCU57_09085 PF00571 CBS domain KCU57_09085 PF03471 Transporter associated domain KCU57_09085 PF01595 Cyclin M transmembrane N-terminal domain KCU57_09095 PF01384 Phosphate transporter family KCU57_09105 PF00986 DNA gyrase B subunit, carboxyl terminus KCU57_09105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU57_09105 PF00204 DNA gyrase B KCU57_09105 PF01751 Toprim domain KCU57_09115 PF06418 CTP synthase N-terminus KCU57_09115 PF00117 Glutamine amidotransferase class-I KCU57_09120 PF00793 DAHP synthetase I family KCU57_09125 PF03952 Enolase, N-terminal domain KCU57_09125 PF00113 Enolase, C-terminal TIM barrel domain KCU57_09130 PF04977 Septum formation initiator KCU57_09135 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KCU57_09140 PF02542 YgbB family KCU57_09145 PF01142 tRNA pseudouridine synthase D (TruD) KCU57_09150 PF01713 Smr domain KCU57_09155 PF01975 Survival protein SurE KCU57_09165 PF09335 SNARE associated Golgi protein KCU57_09170 PF01476 LysM domain KCU57_09170 PF01551 Peptidase family M23 KCU57_09180 PF01985 CRS1 / YhbY (CRM) domain KCU57_09185 PF01728 FtsJ-like methyltransferase KCU57_09190 PF00004 ATPase family associated with various cellular activities (AAA) KCU57_09190 PF17862 AAA+ lid domain KCU57_09190 PF06480 FtsH Extracellular KCU57_09190 PF01434 Peptidase family M41 KCU57_09195 PF00809 Pterin binding enzyme KCU57_09205 PF17209 Hfq protein KCU57_09210 PF01926 50S ribosome-binding GTPase KCU57_09210 PF16360 GTP-binding GTPase Middle Region KCU57_09210 PF13167 GTP-binding GTPase N-terminal KCU57_09215 PF02464 Competence-damaged protein KCU57_09220 PF03109 ABC1 family KCU57_09225 PF01726 LexA DNA binding domain KCU57_09225 PF00717 Peptidase S24-like KCU57_09230 PF00154 recA bacterial DNA recombination protein KCU57_09235 PF02631 RecX family KCU57_09240 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KCU57_09240 PF02272 DHHA1 domain KCU57_09240 PF01411 tRNA synthetases class II (A) KCU57_09245 PF02599 Global regulator protein family KCU57_09270 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain KCU57_09270 PF02129 X-Pro dipeptidyl-peptidase (S15 family) KCU57_09290 PF02322 Cytochrome bd terminal oxidase subunit II KCU57_09295 PF01654 Cytochrome bd terminal oxidase subunit I KCU57_09300 PF00005 ABC transporter KCU57_09300 PF00664 ABC transporter transmembrane region KCU57_09305 PF00664 ABC transporter transmembrane region KCU57_09305 PF00005 ABC transporter KCU57_09310 PF00561 alpha/beta hydrolase fold KCU57_09320 PF03918 Cytochrome C biogenesis protein KCU57_09325 PF08534 Redoxin KCU57_09330 PF01578 Cytochrome C assembly protein KCU57_09330 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal KCU57_09335 PF03100 CcmE KCU57_09345 PF01578 Cytochrome C assembly protein KCU57_09350 PF03379 CcmB protein KCU57_09355 PF00005 ABC transporter KCU57_09360 PF00155 Aminotransferase class I and II KCU57_09365 PF00795 Carbon-nitrogen hydrolase KCU57_09390 PF01479 S4 domain KCU57_09390 PF00849 RNA pseudouridylate synthase KCU57_09395 PF04079 Segregation and condensation complex subunit ScpB KCU57_09400 PF02616 Segregation and condensation protein ScpA KCU57_09405 PF03795 YCII-related domain KCU57_09415 PF00356 Bacterial regulatory proteins, lacI family KCU57_09435 PF00528 Binding-protein-dependent transport system inner membrane component KCU57_09440 PF00528 Binding-protein-dependent transport system inner membrane component KCU57_09450 PF01081 KDPG and KHG aldolase KCU57_09455 PF00920 Dehydratase family KCU57_09460 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase KCU57_09465 PF02685 Glucokinase KCU57_09470 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain KCU57_09470 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain KCU57_09475 PF00005 ABC transporter KCU57_09475 PF17912 MalK OB fold domain KCU57_09480 PF01571 Aminomethyltransferase folate-binding domain KCU57_09490 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KCU57_09495 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KCU57_09500 PF00890 FAD binding domain KCU57_09500 PF02910 Fumarate reductase flavoprotein C-term KCU57_09505 PF13085 2Fe-2S iron-sulfur cluster binding domain KCU57_09505 PF13237 4Fe-4S dicluster domain KCU57_09510 PF03937 Flavinator of succinate dehydrogenase KCU57_09520 PF02687 FtsX-like permease family KCU57_09520 PF12704 MacB-like periplasmic core domain KCU57_09525 PF00005 ABC transporter KCU57_09535 PF00753 Metallo-beta-lactamase superfamily KCU57_09535 PF03772 Competence protein KCU57_09540 PF01618 MotA/TolQ/ExbB proton channel family KCU57_09550 PF00664 ABC transporter transmembrane region KCU57_09550 PF00005 ABC transporter KCU57_09555 PF02606 Tetraacyldisaccharide-1-P 4'-kinase KCU57_09560 PF02348 Cytidylyltransferase KCU57_09565 PF01451 Low molecular weight phosphotyrosine protein phosphatase KCU57_09575 PF01541 GIY-YIG catalytic domain KCU57_09575 PF02151 UvrB/uvrC motif KCU57_09575 PF08459 UvrC Helix-hairpin-helix N-terminal KCU57_09580 PF01066 CDP-alcohol phosphatidyltransferase KCU57_09590 PF00589 Phage integrase family KCU57_09590 PF13356 Arm DNA-binding domain KCU57_09590 PF14659 Phage integrase, N-terminal SAM-like domain KCU57_09715 PF00202 Aminotransferase class-III KCU57_09720 PF00109 Beta-ketoacyl synthase, N-terminal domain KCU57_09720 PF02801 Beta-ketoacyl synthase, C-terminal domain KCU57_09725 PF00550 Phosphopantetheine attachment site KCU57_09750 PF00155 Aminotransferase class I and II KCU57_09755 PF03475 3-alpha domain KCU57_09755 PF03473 MOSC domain KCU57_09760 PF05173 Dihydrodipicolinate reductase, C-terminus KCU57_09760 PF01113 Dihydrodipicolinate reductase, N-terminus KCU57_09765 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KCU57_09765 PF00117 Glutamine amidotransferase class-I KCU57_09775 PF02142 MGS-like domain KCU57_09775 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KCU57_09775 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KCU57_09780 PF01272 Transcription elongation factor, GreA/GreB, C-term KCU57_09780 PF03449 Transcription elongation factor, N-terminal KCU57_09790 PF01368 DHH family KCU57_09790 PF02272 DHHA1 domain KCU57_09790 PF17768 RecJ OB domain KCU57_09845 PF18456 Diiron non-heme beta-hydroxylase N-terminal domain KCU57_09845 PF12706 Beta-lactamase superfamily domain KCU57_09850 PF12706 Beta-lactamase superfamily domain KCU57_09850 PF18456 Diiron non-heme beta-hydroxylase N-terminal domain KCU57_09855 PF03621 MbtH-like protein KCU57_09860 PF00664 ABC transporter transmembrane region KCU57_09860 PF00005 ABC transporter KCU57_09865 PF00378 Enoyl-CoA hydratase/isomerase KCU57_09870 PF00155 Aminotransferase class I and II KCU57_09875 PF00378 Enoyl-CoA hydratase/isomerase KCU57_09885 PF02797 Chalcone and stilbene synthases, C-terminal domain KCU57_09885 PF00195 Chalcone and stilbene synthases, N-terminal domain KCU57_09890 PF00975 Thioesterase domain KCU57_09890 PF00550 Phosphopantetheine attachment site KCU57_09890 PF13193 AMP-binding enzyme C-terminal domain KCU57_09890 PF00668 Condensation domain KCU57_09890 PF00501 AMP-binding enzyme KCU57_09895 PF00501 AMP-binding enzyme KCU57_09895 PF13193 AMP-binding enzyme C-terminal domain KCU57_09895 PF00668 Condensation domain KCU57_09895 PF00550 Phosphopantetheine attachment site KCU57_09895 PF00975 Thioesterase domain KCU57_09900 PF00550 Phosphopantetheine attachment site KCU57_09900 PF00975 Thioesterase domain KCU57_09900 PF13193 AMP-binding enzyme C-terminal domain KCU57_09900 PF00501 AMP-binding enzyme KCU57_09900 PF00668 Condensation domain KCU57_09905 PF00501 AMP-binding enzyme KCU57_09905 PF13193 AMP-binding enzyme C-terminal domain KCU57_09905 PF00668 Condensation domain KCU57_09905 PF00550 Phosphopantetheine attachment site KCU57_09905 PF00975 Thioesterase domain KCU57_09925 PF00155 Aminotransferase class I and II KCU57_09930 PF01070 FMN-dependent dehydrogenase KCU57_09935 PF00202 Aminotransferase class-III KCU57_09940 PF02638 Glycosyl hydrolase-like 10 KCU57_10010 PF00072 Response regulator receiver domain KCU57_10010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU57_10010 PF00512 His Kinase A (phospho-acceptor) domain KCU57_10010 PF09308 LuxQ, periplasmic KCU57_10015 PF17674 HHH domain KCU57_10015 PF00575 S1 RNA binding domain KCU57_10015 PF09371 Tex-like protein N-terminal domain KCU57_10015 PF16921 Tex protein YqgF-like domain KCU57_10020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU57_10020 PF13426 PAS domain KCU57_10020 PF00072 Response regulator receiver domain KCU57_10030 PF01266 FAD dependent oxidoreductase KCU57_10030 PF05430 S-adenosyl-L-methionine-dependent methyltransferase KCU57_10050 PF00561 alpha/beta hydrolase fold KCU57_10060 PF01066 CDP-alcohol phosphatidyltransferase KCU57_10080 PF03618 Kinase/pyrophosphorylase KCU57_10085 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KCU57_10085 PF00391 PEP-utilising enzyme, mobile domain KCU57_10085 PF02896 PEP-utilising enzyme, TIM barrel domain KCU57_10090 PF00924 Mechanosensitive ion channel KCU57_10090 PF05552 Conserved TM helix KCU57_10095 PF00929 Exonuclease KCU57_10100 PF14437 MafB19-like deaminase KCU57_10105 PF01325 Iron dependent repressor, N-terminal DNA binding domain KCU57_10105 PF02742 Iron dependent repressor, metal binding and dimerisation domain KCU57_10110 PF01566 Natural resistance-associated macrophage protein KCU57_10115 PF08448 PAS fold KCU57_10115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU57_10115 PF00512 His Kinase A (phospho-acceptor) domain KCU57_10115 PF13188 PAS domain KCU57_10115 PF00072 Response regulator receiver domain KCU57_10120 PF06745 KaiC KCU57_10125 PF16338 Domain of unknown function (DUF4968) KCU57_10125 PF17137 Domain of unknown function (DUF5110) KCU57_10125 PF01055 Glycosyl hydrolases family 31 KCU57_10140 PF13276 HTH-like domain KCU57_10140 PF13683 Integrase core domain KCU57_10175 PF00117 Glutamine amidotransferase class-I KCU57_10175 PF00958 GMP synthase C terminal domain KCU57_10175 PF02540 NAD synthase KCU57_10175 PF00117 Glutamine amidotransferase class-I KCU57_10175 PF00958 GMP synthase C terminal domain KCU57_10175 PF02540 NAD synthase KCU57_10200 PF02798 Glutathione S-transferase, N-terminal domain KCU57_10200 PF00043 Glutathione S-transferase, C-terminal domain KCU57_10210 PF00117 Glutamine amidotransferase class-I KCU57_10210 PF02540 NAD synthase KCU57_10210 PF00958 GMP synthase C terminal domain KCU57_10215 PF00571 CBS domain KCU57_10215 PF00478 IMP dehydrogenase / GMP reductase domain KCU57_10220 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KCU57_10220 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KCU57_10235 PF02254 TrkA-N domain KCU57_10235 PF00999 Sodium/hydrogen exchanger family KCU57_10240 PF00899 ThiF family KCU57_10245 PF03453 MoeA N-terminal region (domain I and II) KCU57_10245 PF03454 MoeA C-terminal region (domain IV) KCU57_10245 PF00994 Probable molybdopterin binding domain KCU57_10250 PF12804 MobA-like NTP transferase domain KCU57_10255 PF01926 50S ribosome-binding GTPase KCU57_10255 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KCU57_10260 PF13360 PQQ-like domain KCU57_10260 PF01011 PQQ enzyme repeat KCU57_10270 PF13464 Domain of unknown function (DUF4115) KCU57_10280 PF04055 Radical SAM superfamily KCU57_10285 PF00334 Nucleoside diphosphate kinase KCU57_10295 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KCU57_10295 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KCU57_10295 PF00378 Enoyl-CoA hydratase/isomerase KCU57_10300 PF02803 Thiolase, C-terminal domain KCU57_10300 PF00108 Thiolase, N-terminal domain KCU57_10305 PF00483 Nucleotidyl transferase KCU57_10310 PF02719 Polysaccharide biosynthesis protein KCU57_10315 PF00953 Glycosyl transferase family 4 KCU57_10320 PF18073 Rubredoxin metal binding domain KCU57_10330 PF00216 Bacterial DNA-binding protein KCU57_10335 PF00575 S1 RNA binding domain KCU57_10340 PF02224 Cytidylate kinase KCU57_10345 PF00444 Ribosomal protein L36 KCU57_10355 PF04371 Porphyromonas-type peptidyl-arginine deiminase KCU57_10360 PF00795 Carbon-nitrogen hydrolase KCU57_10370 PF00873 AcrB/AcrD/AcrF family KCU57_10375 PF00873 AcrB/AcrD/AcrF family KCU57_10380 PF00529 HlyD membrane-fusion protein of T1SS KCU57_10380 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KCU57_10390 PF00034 Cytochrome c KCU57_10400 PF01106 NifU-like domain KCU57_10405 PF01329 Pterin 4 alpha carbinolamine dehydratase KCU57_10415 PF02535 ZIP Zinc transporter KCU57_10425 PF00849 RNA pseudouridylate synthase KCU57_10425 PF01479 S4 domain KCU57_10430 PF12111 Polyribonucleotide phosphorylase C terminal KCU57_10430 PF00575 S1 RNA binding domain KCU57_10430 PF10150 Ribonuclease E/G family KCU57_10440 PF00072 Response regulator receiver domain KCU57_10440 PF00196 Bacterial regulatory proteins, luxR family KCU57_10450 PF13333 Integrase core domain KCU57_10450 PF00665 Integrase core domain KCU57_10450 PF13276 HTH-like domain KCU57_10460 PF01527 Transposase KCU57_10485 PF00005 ABC transporter KCU57_10485 PF00664 ABC transporter transmembrane region KCU57_10510 PF00534 Glycosyl transferases group 1 KCU57_10510 PF13439 Glycosyltransferase Family 4 KCU57_10545 PF00535 Glycosyl transferase family 2 KCU57_10550 PF01943 Polysaccharide biosynthesis protein KCU57_10555 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KCU57_10575 PF05523 WxcM-like, C-terminal KCU57_10580 PF01292 Prokaryotic cytochrome b561 KCU57_10590 PF00034 Cytochrome c KCU57_10600 PF04542 Sigma-70 region 2 KCU57_10600 PF08281 Sigma-70, region 4 KCU57_10610 PF00082 Subtilase family KCU57_10615 PF01578 Cytochrome C assembly protein KCU57_10625 PF03100 CcmE KCU57_10630 PF01578 Cytochrome C assembly protein KCU57_10630 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal KCU57_10635 PF08534 Redoxin KCU57_10640 PF03918 Cytochrome C biogenesis protein KCU57_10655 PF00654 Voltage gated chloride channel KCU57_10660 PF12002 MgsA AAA+ ATPase C terminal KCU57_10660 PF00004 ATPase family associated with various cellular activities (AAA) KCU57_10660 PF16193 AAA C-terminal domain KCU57_10670 PF03548 Outer membrane lipoprotein carrier protein LolA KCU57_10680 PF01580 FtsK/SpoIIIE family KCU57_10680 PF09397 Ftsk gamma domain KCU57_10680 PF17854 FtsK alpha domain KCU57_10680 PF13491 4TM region of DNA translocase FtsK/SpoIIIE KCU57_10685 PF07992 Pyridine nucleotide-disulphide oxidoreductase KCU57_10695 PF03588 Leucyl/phenylalanyl-tRNA protein transferase KCU57_10700 PF01176 Translation initiation factor 1A / IF-1 KCU57_10705 PF00004 ATPase family associated with various cellular activities (AAA) KCU57_10705 PF10431 C-terminal, D2-small domain, of ClpB protein KCU57_10705 PF02861 Clp amino terminal domain, pathogenicity island component KCU57_10705 PF17871 AAA lid domain KCU57_10705 PF07724 AAA domain (Cdc48 subfamily) KCU57_10710 PF02617 ATP-dependent Clp protease adaptor protein ClpS KCU57_10720 PF00293 NUDIX domain KCU57_10730 PF04356 Protein of unknown function (DUF489) KCU57_10735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KCU57_10735 PF00672 HAMP domain KCU57_10735 PF12729 Four helix bundle sensory module for signal transduction KCU57_10745 PF00005 ABC transporter KCU57_10755 PF00563 EAL domain KCU57_10755 PF03707 Bacterial signalling protein N terminal repeat KCU57_10755 PF00990 Diguanylate cyclase, GGDEF domain KCU57_10760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU57_10760 PF07730 Histidine kinase KCU57_10765 PF00563 EAL domain KCU57_10765 PF00990 Diguanylate cyclase, GGDEF domain KCU57_10765 PF03707 Bacterial signalling protein N terminal repeat KCU57_10770 PF00072 Response regulator receiver domain KCU57_10770 PF00512 His Kinase A (phospho-acceptor) domain KCU57_10770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU57_10770 PF08448 PAS fold KCU57_10770 PF13188 PAS domain KCU57_10790 PF00072 Response regulator receiver domain KCU57_10790 PF01584 CheW-like domain KCU57_10800 PF00460 Flagella basal body rod protein KCU57_10800 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KCU57_10805 PF13860 FlgD Ig-like domain KCU57_10805 PF13861 FlgD Tudor-like domain KCU57_10805 PF03963 Flagellar hook capping protein - N-terminal region KCU57_10810 PF07559 Flagellar basal body protein FlaE KCU57_10810 PF00460 Flagella basal body rod protein KCU57_10810 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KCU57_10815 PF00460 Flagella basal body rod protein KCU57_10815 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KCU57_10820 PF00460 Flagella basal body rod protein KCU57_10820 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KCU57_10825 PF02107 Flagellar L-ring protein KCU57_10830 PF02119 Flagellar P-ring protein KCU57_10835 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase KCU57_10835 PF10135 Rod binding protein KCU57_10840 PF00460 Flagella basal body rod protein KCU57_10840 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KCU57_10840 PF00460 Flagella basal body rod protein KCU57_10840 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KCU57_10845 PF00669 Bacterial flagellin N-terminal helical region KCU57_10850 PF00700 Bacterial flagellin C-terminal helical region KCU57_10850 PF00669 Bacterial flagellin N-terminal helical region KCU57_10855 PF07196 Flagellin hook IN motif KCU57_10855 PF07195 Flagellar hook-associated protein 2 C-terminus KCU57_10855 PF02465 Flagellar hook-associated protein 2 N-terminus KCU57_10860 PF02561 Flagellar protein FliS KCU57_10875 PF00072 Response regulator receiver domain KCU57_10875 PF00196 Bacterial regulatory proteins, luxR family KCU57_10880 PF00309 Sigma-54 factor, Activator interacting domain (AID) KCU57_10880 PF04552 Sigma-54, DNA binding domain KCU57_10880 PF04963 Sigma-54 factor, core binding domain KCU57_10885 PF01339 CheB methylesterase KCU57_10885 PF00072 Response regulator receiver domain KCU57_10890 PF00158 Sigma-54 interaction domain KCU57_10890 PF02954 Bacterial regulatory protein, Fis family KCU57_10890 PF06490 Flagellar regulatory protein FleQ KCU57_10895 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KCU57_10905 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KCU57_10905 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KCU57_10945 PF00534 Glycosyl transferases group 1 KCU57_10945 PF00535 Glycosyl transferase family 2 KCU57_10950 PF02049 Flagellar hook-basal body complex protein FliE KCU57_10955 PF01514 Secretory protein of YscJ/FliF family KCU57_10955 PF08345 Flagellar M-ring protein C-terminal KCU57_10960 PF01706 FliG C-terminal domain KCU57_10960 PF14841 FliG middle domain KCU57_10960 PF14842 FliG N-terminal domain KCU57_10970 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KCU57_10970 PF18269 T3SS EscN ATPase C-terminal domain KCU57_10990 PF02154 Flagellar motor switch protein FliM KCU57_10990 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KCU57_10995 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KCU57_11000 PF04347 Flagellar biosynthesis protein, FliO KCU57_11005 PF00813 FliP family KCU57_11010 PF01313 Bacterial export proteins, family 3 KCU57_11015 PF01311 Bacterial export proteins, family 1 KCU57_11020 PF00990 Diguanylate cyclase, GGDEF domain KCU57_11025 PF00990 Diguanylate cyclase, GGDEF domain KCU57_11030 PF01312 FlhB HrpN YscU SpaS Family KCU57_11035 PF00771 FHIPEP family KCU57_11040 PF00448 SRP54-type protein, GTPase domain KCU57_11045 PF10609 NUBPL iron-transfer P-loop NTPase KCU57_11050 PF04542 Sigma-70 region 2 KCU57_11050 PF04539 Sigma-70 region 3 KCU57_11050 PF04545 Sigma-70, region 4 KCU57_11055 PF00072 Response regulator receiver domain KCU57_11060 PF04344 Chemotaxis phosphatase, CheZ KCU57_11065 PF01627 Hpt domain KCU57_11065 PF01584 CheW-like domain KCU57_11065 PF02895 Signal transducing histidine kinase, homodimeric domain KCU57_11065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU57_11065 PF00072 Response regulator receiver domain KCU57_11070 PF01618 MotA/TolQ/ExbB proton channel family KCU57_11075 PF13677 Membrane MotB of proton-channel complex MotA/MotB KCU57_11075 PF00691 OmpA family KCU57_11080 PF13614 AAA domain KCU57_11085 PF01584 CheW-like domain KCU57_11095 PF00072 Response regulator receiver domain KCU57_11100 PF01584 CheW-like domain KCU57_11100 PF09078 CheY binding KCU57_11100 PF02895 Signal transducing histidine kinase, homodimeric domain KCU57_11100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU57_11100 PF01627 Hpt domain KCU57_11115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KCU57_11115 PF02203 Tar ligand binding domain homologue KCU57_11115 PF00672 HAMP domain KCU57_11120 PF02203 Tar ligand binding domain homologue KCU57_11120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KCU57_11120 PF00672 HAMP domain KCU57_11125 PF00672 HAMP domain KCU57_11125 PF00672 HAMP domain KCU57_11125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KCU57_11125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KCU57_11135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KCU57_11135 PF00672 HAMP domain KCU57_11135 PF02203 Tar ligand binding domain homologue KCU57_11145 PF02203 Tar ligand binding domain homologue KCU57_11145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KCU57_11145 PF00672 HAMP domain KCU57_11150 PF00672 HAMP domain KCU57_11150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KCU57_11150 PF02203 Tar ligand binding domain homologue KCU57_11155 PF00672 HAMP domain KCU57_11155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KCU57_11155 PF02203 Tar ligand binding domain homologue KCU57_11165 PF00672 HAMP domain KCU57_11165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KCU57_11165 PF02203 Tar ligand binding domain homologue KCU57_11170 PF07317 Flagellar regulator YcgR KCU57_11170 PF07238 PilZ domain KCU57_11175 PF01584 CheW-like domain KCU57_11185 PF00672 HAMP domain KCU57_11185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KCU57_11185 PF02203 Tar ligand binding domain homologue KCU57_11195 PF00672 HAMP domain KCU57_11195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KCU57_11200 PF01739 CheR methyltransferase, SAM binding domain KCU57_11200 PF03705 CheR methyltransferase, all-alpha domain KCU57_11205 PF03975 CheD chemotactic sensory transduction KCU57_11210 PF01339 CheB methylesterase KCU57_11210 PF00072 Response regulator receiver domain KCU57_11215 PF00563 EAL domain KCU57_11215 PF03707 Bacterial signalling protein N terminal repeat KCU57_11215 PF00990 Diguanylate cyclase, GGDEF domain KCU57_11220 PF00990 Diguanylate cyclase, GGDEF domain KCU57_11220 PF17158 Membrane-associated sensor, integral membrane domain KCU57_11225 PF00330 Aconitase family (aconitate hydratase) KCU57_11225 PF11791 Aconitate B N-terminal domain KCU57_11225 PF06434 Aconitate hydratase 2 N-terminus KCU57_11240 PF00330 Aconitase family (aconitate hydratase) KCU57_11240 PF00694 Aconitase C-terminal domain KCU57_11250 PF13193 AMP-binding enzyme C-terminal domain KCU57_11250 PF00501 AMP-binding enzyme KCU57_11255 PF00378 Enoyl-CoA hydratase/isomerase KCU57_11260 PF00072 Response regulator receiver domain KCU57_11260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU57_11260 PF01627 Hpt domain KCU57_11260 PF00512 His Kinase A (phospho-acceptor) domain KCU57_11265 PF00072 Response regulator receiver domain KCU57_11270 PF00152 tRNA synthetases class II (D, K and N) KCU57_11270 PF01336 OB-fold nucleic acid binding domain KCU57_11295 PF03466 LysR substrate binding domain KCU57_11295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KCU57_11300 PF01081 KDPG and KHG aldolase KCU57_11305 PF13378 Enolase C-terminal domain-like KCU57_11305 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KCU57_11310 PF08450 SMP-30/Gluconolactonase/LRE-like region KCU57_11315 PF05035 2-keto-3-deoxy-galactonokinase KCU57_11320 PF11953 Domain of unknown function (DUF3470) KCU57_11320 PF00037 4Fe-4S binding domain KCU57_11330 PF00701 Dihydrodipicolinate synthetase family KCU57_11340 PF00578 AhpC/TSA family KCU57_11345 PF13638 PIN domain KCU57_11345 PF02562 PhoH-like protein KCU57_11360 PF08543 Phosphomethylpyrimidine kinase KCU57_11380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KCU57_11380 PF03466 LysR substrate binding domain KCU57_11385 PF02678 Pirin KCU57_11385 PF17954 Quercetinase C-terminal cupin domain KCU57_11390 PF00128 Alpha amylase, catalytic domain KCU57_11390 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KCU57_11420 PF02421 Ferrous iron transport protein B KCU57_11420 PF07664 Ferrous iron transport protein B C terminus KCU57_11420 PF07670 Nucleoside recognition KCU57_11430 PF00378 Enoyl-CoA hydratase/isomerase KCU57_11435 PF00682 HMGL-like KCU57_11440 PF00106 short chain dehydrogenase KCU57_11445 PF01132 Elongation factor P (EF-P) OB domain KCU57_11445 PF08207 Elongation factor P (EF-P) KOW-like domain KCU57_11445 PF09285 Elongation factor P, C-terminal KCU57_11465 PF02913 FAD linked oxidases, C-terminal domain KCU57_11465 PF01565 FAD binding domain KCU57_11470 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KCU57_11470 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KCU57_11485 PF13520 Amino acid permease KCU57_11490 PF13520 Amino acid permease KCU57_11495 PF00596 Class II Aldolase and Adducin N-terminal domain KCU57_11500 PF03079 ARD/ARD' family KCU57_11520 PF01502 Phosphoribosyl-AMP cyclohydrolase KCU57_11520 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase KCU57_11525 PF00977 Histidine biosynthesis protein KCU57_11530 PF00977 Histidine biosynthesis protein KCU57_11535 PF00117 Glutamine amidotransferase class-I KCU57_11540 PF00475 Imidazoleglycerol-phosphate dehydratase KCU57_11545 PF00155 Aminotransferase class I and II KCU57_11550 PF00815 Histidinol dehydrogenase KCU57_11555 PF01634 ATP phosphoribosyltransferase KCU57_11555 PF08029 HisG, C-terminal domain KCU57_11565 PF13393 Histidyl-tRNA synthetase KCU57_11565 PF03129 Anticodon binding domain KCU57_11570 PF13545 Crp-like helix-turn-helix domain KCU57_11570 PF00027 Cyclic nucleotide-binding domain KCU57_11580 PF00291 Pyridoxal-phosphate dependent enzyme KCU57_11580 PF14821 Threonine synthase N terminus KCU57_11585 PF07519 Tannase and feruloyl esterase KCU57_11590 PF13406 Transglycosylase SLT domain KCU57_11595 PF08544 GHMP kinases C terminal KCU57_11595 PF00288 GHMP kinases N terminal domain KCU57_11600 PF00742 Homoserine dehydrogenase KCU57_11600 PF00696 Amino acid kinase family KCU57_11600 PF01842 ACT domain KCU57_11600 PF13840 ACT domain KCU57_11600 PF03447 Homoserine dehydrogenase, NAD binding domain KCU57_11615 PF00171 Aldehyde dehydrogenase family KCU57_11630 PF01180 Dihydroorotate dehydrogenase KCU57_11635 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KCU57_11635 PF01565 FAD binding domain KCU57_11660 PF01569 PAP2 superfamily KCU57_11665 PF04551 GcpE protein KCU57_11675 PF00072 Response regulator receiver domain KCU57_11680 PF00990 Diguanylate cyclase, GGDEF domain KCU57_11680 PF00563 EAL domain KCU57_11680 PF03707 Bacterial signalling protein N terminal repeat KCU57_11685 PF00474 Sodium:solute symporter family KCU57_11690 PF14310 Fibronectin type III-like domain KCU57_11690 PF01915 Glycosyl hydrolase family 3 C-terminal domain KCU57_11690 PF00933 Glycosyl hydrolase family 3 N terminal domain KCU57_11695 PF00342 Phosphoglucose isomerase KCU57_11700 PF02261 Aspartate decarboxylase KCU57_11705 PF02569 Pantoate-beta-alanine ligase KCU57_11710 PF02548 Ketopantoate hydroxymethyltransferase KCU57_11715 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KCU57_11720 PF12626 Polymerase A arginine-rich C-terminus KCU57_11720 PF12627 Probable RNA and SrmB- binding site of polymerase A KCU57_11720 PF01743 Poly A polymerase head domain KCU57_11730 PF00132 Bacterial transferase hexapeptide (six repeats) KCU57_11735 PF02649 Type I GTP cyclohydrolase folE2 KCU57_11740 PF01520 N-acetylmuramoyl-L-alanine amidase KCU57_11740 PF11741 AMIN domain KCU57_11745 PF00083 Sugar (and other) transporter KCU57_11755 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KCU57_11755 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KCU57_11765 PF01055 Glycosyl hydrolases family 31 KCU57_11765 PF16338 Domain of unknown function (DUF4968) KCU57_11765 PF17137 Domain of unknown function (DUF5110) KCU57_11785 PF00171 Aldehyde dehydrogenase family KCU57_11790 PF00696 Amino acid kinase family KCU57_11790 PF01472 PUA domain KCU57_11805 PF00206 Lyase KCU57_11810 PF01118 Semialdehyde dehydrogenase, NAD binding domain KCU57_11820 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase KCU57_11820 PF00696 Amino acid kinase family KCU57_11825 PF07687 Peptidase dimerisation domain KCU57_11825 PF01546 Peptidase family M20/M25/M40 KCU57_11830 PF00764 Arginosuccinate synthase KCU57_11835 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KCU57_11835 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KCU57_11845 PF01406 tRNA synthetases class I (C) catalytic domain KCU57_11845 PF09190 DALR domain KCU57_11850 PF02657 Fe-S metabolism associated domain KCU57_11860 PF00561 alpha/beta hydrolase fold KCU57_11870 PF01258 Prokaryotic dksA/traR C4-type zinc finger KCU57_11875 PF01809 Putative membrane protein insertion efficiency factor KCU57_11880 PF01979 Amidohydrolase family KCU57_11885 PF01551 Peptidase family M23 KCU57_11885 PF08460 Bacterial SH3 domain KCU57_11895 PF01095 Pectinesterase KCU57_11900 PF00295 Glycosyl hydrolases family 28 KCU57_11915 PF13419 Haloacid dehalogenase-like hydrolase KCU57_11925 PF01979 Amidohydrolase family KCU57_11930 PF06736 Protein of unknown function (DUF1211) KCU57_11935 PF08207 Elongation factor P (EF-P) KOW-like domain KCU57_11935 PF01132 Elongation factor P (EF-P) OB domain KCU57_11935 PF09285 Elongation factor P, C-terminal KCU57_11940 PF04055 Radical SAM superfamily KCU57_11945 PF00360 Phytochrome region KCU57_11945 PF00563 EAL domain KCU57_11945 PF01590 GAF domain KCU57_11945 PF00990 Diguanylate cyclase, GGDEF domain KCU57_11955 PF00588 SpoU rRNA Methylase family KCU57_11960 PF00459 Inositol monophosphatase family KCU57_11965 PF07549 SecD/SecF GG Motif KCU57_11965 PF02355 Protein export membrane protein KCU57_11970 PF02355 Protein export membrane protein KCU57_11970 PF13721 SecD export protein N-terminal TM region KCU57_11970 PF07549 SecD/SecF GG Motif KCU57_11975 PF02699 Preprotein translocase subunit KCU57_11980 PF01702 Queuine tRNA-ribosyltransferase KCU57_11985 PF02547 Queuosine biosynthesis protein KCU57_11995 PF00202 Aminotransferase class-III KCU57_12010 PF02927 Cellulase N-terminal ig-like domain KCU57_12010 PF00759 Glycosyl hydrolase family 9 KCU57_12015 PF00753 Metallo-beta-lactamase superfamily KCU57_12025 PF00037 4Fe-4S binding domain KCU57_12035 PF01467 Cytidylyltransferase-like KCU57_12045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU57_12045 PF00183 Hsp90 protein KCU57_12050 PF02615 Malate/L-lactate dehydrogenase KCU57_12055 PF07715 TonB-dependent Receptor Plug Domain KCU57_12055 PF00593 TonB dependent receptor KCU57_12075 PF04616 Glycosyl hydrolases family 43 KCU57_12080 PF07532 Bacterial Ig-like domain (group 4) KCU57_12085 PF00593 TonB dependent receptor KCU57_12085 PF07715 TonB-dependent Receptor Plug Domain KCU57_12110 PF13520 Amino acid permease KCU57_12125 PF01321 Creatinase/Prolidase N-terminal domain KCU57_12125 PF00557 Metallopeptidase family M24 KCU57_12130 PF00171 Aldehyde dehydrogenase family KCU57_12135 PF00701 Dihydrodipicolinate synthetase family KCU57_12140 PF04324 BFD-like [2Fe-2S] binding domain KCU57_12140 PF07992 Pyridine nucleotide-disulphide oxidoreductase KCU57_12150 PF01266 FAD dependent oxidoreductase KCU57_12155 PF05544 Proline racemase KCU57_12165 PF00448 SRP54-type protein, GTPase domain KCU57_12165 PF02881 SRP54-type protein, helical bundle domain KCU57_12170 PF14815 NUDIX domain KCU57_12170 PF00730 HhH-GPD superfamily base excision DNA repair protein KCU57_12170 PF10576 Iron-sulfur binding domain of endonuclease III KCU57_12170 PF00633 Helix-hairpin-helix motif KCU57_12175 PF04362 Bacterial Fe(2+) trafficking KCU57_12195 PF01612 3'-5' exonuclease KCU57_12195 PF00570 HRDC domain KCU57_12210 PF13356 Arm DNA-binding domain KCU57_12210 PF00589 Phage integrase family KCU57_12235 PF01381 Helix-turn-helix KCU57_12255 PF01584 CheW-like domain KCU57_12260 PF02203 Tar ligand binding domain homologue KCU57_12260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KCU57_12260 PF00672 HAMP domain KCU57_12265 PF02743 Cache domain KCU57_12265 PF00672 HAMP domain KCU57_12265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KCU57_12290 PF00563 EAL domain KCU57_12290 PF00990 Diguanylate cyclase, GGDEF domain KCU57_12290 PF03707 Bacterial signalling protein N terminal repeat KCU57_12290 PF13188 PAS domain KCU57_12295 PF00575 S1 RNA binding domain KCU57_12295 PF01138 3' exoribonuclease family, domain 1 KCU57_12295 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KCU57_12295 PF00013 KH domain KCU57_12295 PF03725 3' exoribonuclease family, domain 2 KCU57_12300 PF00312 Ribosomal protein S15 KCU57_12305 PF09157 Pseudouridine synthase II TruB, C-terminal KCU57_12305 PF16198 tRNA pseudouridylate synthase B C-terminal domain KCU57_12305 PF01509 TruB family pseudouridylate synthase (N terminal domain) KCU57_12310 PF02033 Ribosome-binding factor A KCU57_12315 PF00009 Elongation factor Tu GTP binding domain KCU57_12315 PF11987 Translation-initiation factor 2 KCU57_12315 PF08364 Bacterial translation initiation factor IF-2 associated region KCU57_12315 PF04760 Translation initiation factor IF-2, N-terminal region KCU57_12320 PF08529 NusA N-terminal domain KCU57_12320 PF00575 S1 RNA binding domain KCU57_12320 PF13184 NusA-like KH domain KCU57_12325 PF02576 RimP N-terminal domain KCU57_12325 PF17384 RimP C-terminal SH3 domain KCU57_12335 PF00361 Proton-conducting membrane transporter KCU57_12340 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus KCU57_12340 PF00361 Proton-conducting membrane transporter KCU57_12345 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KCU57_12345 PF00361 Proton-conducting membrane transporter KCU57_12350 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KCU57_12355 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 KCU57_12360 PF12838 4Fe-4S dicluster domain KCU57_12365 PF00146 NADH dehydrogenase KCU57_12370 PF00384 Molybdopterin oxidoreductase KCU57_12370 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KCU57_12370 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal KCU57_12375 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit KCU57_12375 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region KCU57_12375 PF10531 SLBB domain KCU57_12385 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit KCU57_12390 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit KCU57_12395 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit KCU57_12400 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 KCU57_12415 PF00121 Triosephosphate isomerase KCU57_12435 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KCU57_12435 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KCU57_12435 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KCU57_12435 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KCU57_12440 PF17848 Acetyl-coA carboxylase zinc finger domain KCU57_12440 PF01039 Carboxyl transferase domain KCU57_12445 PF00290 Tryptophan synthase alpha chain KCU57_12450 PF00291 Pyridoxal-phosphate dependent enzyme KCU57_12455 PF03466 LysR substrate binding domain KCU57_12455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KCU57_12465 PF05598 Transposase domain (DUF772) KCU57_12475 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase KCU57_12480 PF01416 tRNA pseudouridine synthase KCU57_12490 PF02774 Semialdehyde dehydrogenase, dimerisation domain KCU57_12490 PF01118 Semialdehyde dehydrogenase, NAD binding domain KCU57_12495 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KCU57_12495 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KCU57_12500 PF01264 Chorismate synthase KCU57_12505 PF05175 Methyltransferase small domain KCU57_12510 PF02630 SCO1/SenC KCU57_12515 PF02666 Phosphatidylserine decarboxylase KCU57_12520 PF06737 Transglycosylase-like domain KCU57_12525 PF05872 Bacterial protein of unknown function (DUF853) KCU57_12530 PF00293 NUDIX domain KCU57_12545 PF01272 Transcription elongation factor, GreA/GreB, C-term KCU57_12545 PF03449 Transcription elongation factor, N-terminal KCU57_12550 PF01738 Dienelactone hydrolase family KCU57_12565 PF06271 RDD family KCU57_12570 PF00692 dUTPase KCU57_12575 PF10609 NUBPL iron-transfer P-loop NTPase KCU57_12585 PF00593 TonB dependent receptor KCU57_12585 PF07715 TonB-dependent Receptor Plug Domain KCU57_12590 PF00593 TonB dependent receptor KCU57_12590 PF07715 TonB-dependent Receptor Plug Domain KCU57_12595 PF13181 Tetratricopeptide repeat KCU57_12610 PF01431 Peptidase family M13 KCU57_12610 PF05649 Peptidase family M13 KCU57_12630 PF05598 Transposase domain (DUF772) KCU57_12675 PF07992 Pyridine nucleotide-disulphide oxidoreductase KCU57_12675 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KCU57_12680 PF01266 FAD dependent oxidoreductase KCU57_12685 PF04235 Protein of unknown function (DUF418) KCU57_12690 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KCU57_12695 PF00877 NlpC/P60 family KCU57_12700 PF00877 NlpC/P60 family KCU57_12715 PF03061 Thioesterase superfamily KCU57_12725 PF00375 Sodium:dicarboxylate symporter family KCU57_12730 PF00245 Alkaline phosphatase KCU57_12740 PF11734 TilS substrate C-terminal domain KCU57_12740 PF09179 TilS substrate binding domain KCU57_12740 PF01171 PP-loop family KCU57_12745 PF02609 Exonuclease VII small subunit KCU57_12750 PF00348 Polyprenyl synthetase KCU57_12755 PF00072 Response regulator receiver domain KCU57_12755 PF00486 Transcriptional regulatory protein, C terminal KCU57_12760 PF00034 Cytochrome c KCU57_12760 PF03150 Di-haem cytochrome c peroxidase KCU57_12765 PF08448 PAS fold KCU57_12765 PF00512 His Kinase A (phospho-acceptor) domain KCU57_12765 PF13188 PAS domain KCU57_12765 PF00072 Response regulator receiver domain KCU57_12765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU57_12770 PF03466 LysR substrate binding domain KCU57_12770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KCU57_12775 PF06812 ImpA, N-terminal, type VI secretion system KCU57_12785 PF03793 PASTA domain KCU57_12785 PF00069 Protein kinase domain KCU57_12800 PF06761 Intracellular multiplication and human macrophage-killing KCU57_12800 PF06744 Type VI secretion protein IcmF C-terminal KCU57_12800 PF14331 ImcF-related N-terminal domain KCU57_12810 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE KCU57_12825 PF06715 Gp5 C-terminal repeat (3 copies) KCU57_12825 PF04717 Type VI secretion system, phage-baseplate injector KCU57_12840 PF10431 C-terminal, D2-small domain, of ClpB protein KCU57_12840 PF17871 AAA lid domain KCU57_12840 PF07724 AAA domain (Cdc48 subfamily) KCU57_12840 PF00004 ATPase family associated with various cellular activities (AAA) KCU57_12850 PF05947 Type VI secretion system, TssF KCU57_12855 PF04965 Gene 25-like lysozyme KCU57_12860 PF07024 ImpE protein KCU57_12865 PF05638 Type VI secretion system effector, Hcp KCU57_12870 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath KCU57_12875 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 KCU57_12890 PF01523 Putative modulator of DNA gyrase KCU57_12895 PF04751 Protein of unknown function (DUF615) KCU57_12900 PF01523 Putative modulator of DNA gyrase KCU57_12910 PF00575 S1 RNA binding domain KCU57_12910 PF10150 Ribonuclease E/G family KCU57_12915 PF02545 Maf-like protein KCU57_12920 PF04402 Protein of unknown function (DUF541) KCU57_12930 PF07715 TonB-dependent Receptor Plug Domain KCU57_12930 PF00593 TonB dependent receptor KCU57_12935 PF02590 Predicted SPOUT methyltransferase KCU57_12950 PF01467 Cytidylyltransferase-like KCU57_12965 PF00133 tRNA synthetases class I (I, L, M and V) KCU57_12965 PF13603 Leucyl-tRNA synthetase, Domain 2 KCU57_12965 PF08264 Anticodon-binding domain of tRNA KCU57_12975 PF00085 Thioredoxin KCU57_12990 PF02592 Putative vitamin uptake transporter KCU57_13000 PF02574 Homocysteine S-methyltransferase KCU57_13005 PF00324 Amino acid permease KCU57_13015 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KCU57_13025 PF01588 Putative tRNA binding domain KCU57_13025 PF09334 tRNA synthetases class I (M) KCU57_13035 PF04060 Putative Fe-S cluster KCU57_13050 PF04545 Sigma-70, region 4 KCU57_13050 PF04542 Sigma-70 region 2 KCU57_13095 PF01042 Endoribonuclease L-PSP KCU57_13105 PF09924 Uncharacterised conserved protein (DUF2156) KCU57_13105 PF03706 Lysylphosphatidylglycerol synthase TM region KCU57_13135 PF07690 Major Facilitator Superfamily KCU57_13140 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KCU57_13145 PF03831 PhnA domain KCU57_13145 PF08274 PhnA Zinc-Ribbon KCU57_13150 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KCU57_13160 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus KCU57_13160 PF05175 Methyltransferase small domain KCU57_13190 PF01258 Prokaryotic dksA/traR C4-type zinc finger KCU57_13200 PF01863 Protein of unknown function DUF45 KCU57_13215 PF13472 GDSL-like Lipase/Acylhydrolase family KCU57_13220 PF00512 His Kinase A (phospho-acceptor) domain KCU57_13220 PF01627 Hpt domain KCU57_13220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU57_13220 PF00672 HAMP domain KCU57_13220 PF00072 Response regulator receiver domain KCU57_13225 PF01011 PQQ enzyme repeat KCU57_13225 PF13360 PQQ-like domain KCU57_13230 PF00392 Bacterial regulatory proteins, gntR family KCU57_13230 PF07729 FCD domain KCU57_13235 PF16353 Domain of unknown function(DUF4981) KCU57_13235 PF02929 Beta galactosidase small chain KCU57_13235 PF00703 Glycosyl hydrolases family 2 KCU57_13235 PF02837 Glycosyl hydrolases family 2, sugar binding domain KCU57_13235 PF02836 Glycosyl hydrolases family 2, TIM barrel domain KCU57_13320 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KCU57_13320 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KCU57_13325 PF12951 Passenger-associated-transport-repeat KCU57_13325 PF00082 Subtilase family KCU57_13325 PF03797 Autotransporter beta-domain KCU57_13330 PF00108 Thiolase, N-terminal domain KCU57_13330 PF02803 Thiolase, C-terminal domain KCU57_13340 PF00012 Hsp70 protein KCU57_13355 PF00990 Diguanylate cyclase, GGDEF domain KCU57_13355 PF00072 Response regulator receiver domain KCU57_13370 PF04679 ATP dependent DNA ligase C terminal region KCU57_13370 PF01068 ATP dependent DNA ligase domain KCU57_13370 PF04675 DNA ligase N terminus KCU57_13375 PF04679 ATP dependent DNA ligase C terminal region KCU57_13375 PF01068 ATP dependent DNA ligase domain KCU57_13375 PF04675 DNA ligase N terminus KCU57_13380 PF00271 Helicase conserved C-terminal domain KCU57_13380 PF00270 DEAD/DEAH box helicase KCU57_13380 PF08494 DEAD/H associated KCU57_13390 PF01494 FAD binding domain KCU57_13395 PF00313 'Cold-shock' DNA-binding domain KCU57_13400 PF01048 Phosphorylase superfamily KCU57_13405 PF00156 Phosphoribosyl transferase domain KCU57_13410 PF00933 Glycosyl hydrolase family 3 N terminal domain KCU57_13420 PF01928 CYTH domain KCU57_13425 PF05958 tRNA (Uracil-5-)-methyltransferase KCU57_13430 PF00072 Response regulator receiver domain KCU57_13430 PF00486 Transcriptional regulatory protein, C terminal KCU57_13435 PF11967 Recombination protein O N terminal KCU57_13435 PF02565 Recombination protein O C terminal KCU57_13440 PF07650 KH domain KCU57_13440 PF01926 50S ribosome-binding GTPase KCU57_13445 PF00035 Double-stranded RNA binding motif KCU57_13445 PF14622 Ribonuclease-III-like KCU57_13455 PF10502 Signal peptidase, peptidase S26 KCU57_13460 PF06421 GTP-binding protein LepA C-terminus KCU57_13460 PF00679 Elongation factor G C-terminus KCU57_13460 PF00009 Elongation factor Tu GTP binding domain KCU57_13460 PF03144 Elongation factor Tu domain 2 KCU57_13465 PF13180 PDZ domain KCU57_13475 PF04542 Sigma-70 region 2 KCU57_13475 PF08281 Sigma-70, region 4 KCU57_13480 PF00378 Enoyl-CoA hydratase/isomerase KCU57_13480 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KCU57_13480 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KCU57_13495 PF01545 Cation efflux family KCU57_13500 PF03601 Conserved hypothetical protein 698 KCU57_13505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KCU57_13515 PF00488 MutS domain V KCU57_13515 PF05188 MutS domain II KCU57_13515 PF01624 MutS domain I KCU57_13515 PF05190 MutS family domain IV KCU57_13515 PF05192 MutS domain III KCU57_13530 PF00141 Peroxidase KCU57_13535 PF01479 S4 domain KCU57_13545 PF01554 MatE KCU57_13550 PF01245 Ribosomal protein L19 KCU57_13555 PF01746 tRNA (Guanine-1)-methyltransferase KCU57_13560 PF05239 PRC-barrel domain KCU57_13560 PF01782 RimM N-terminal domain KCU57_13565 PF00886 Ribosomal protein S16 KCU57_13575 PF03060 Nitronate monooxygenase KCU57_13580 PF02881 SRP54-type protein, helical bundle domain KCU57_13580 PF02978 Signal peptide binding domain KCU57_13580 PF00448 SRP54-type protein, GTPase domain KCU57_13590 PF01263 Aldose 1-epimerase KCU57_13595 PF06964 Alpha-L-arabinofuranosidase C-terminal domain KCU57_13605 PF00999 Sodium/hydrogen exchanger family KCU57_13615 PF13417 Glutathione S-transferase, N-terminal domain KCU57_13615 PF00043 Glutathione S-transferase, C-terminal domain KCU57_13620 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation KCU57_13620 PF10566 Glycoside hydrolase 97 KCU57_13620 PF14508 Glycosyl-hydrolase 97 N-terminal KCU57_13640 PF02653 Branched-chain amino acid transport system / permease component KCU57_13645 PF02653 Branched-chain amino acid transport system / permease component KCU57_13650 PF00005 ABC transporter KCU57_13655 PF13407 Periplasmic binding protein domain KCU57_13660 PF00171 Aldehyde dehydrogenase family KCU57_13670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KCU57_13670 PF03466 LysR substrate binding domain KCU57_13680 PF00920 Dehydratase family KCU57_13685 PF01464 Transglycosylase SLT domain KCU57_13700 PF00263 Bacterial type II and III secretion system protein KCU57_13700 PF03958 Bacterial type II/III secretion system short domain KCU57_13705 PF12833 Helix-turn-helix domain KCU57_13720 PF02874 ATP synthase alpha/beta family, beta-barrel domain KCU57_13720 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KCU57_13720 PF18269 T3SS EscN ATPase C-terminal domain KCU57_13735 PF01514 Secretory protein of YscJ/FliF family KCU57_13750 PF01312 FlhB HrpN YscU SpaS Family KCU57_13755 PF00771 FHIPEP family KCU57_13770 PF00813 FliP family KCU57_13775 PF01313 Bacterial export proteins, family 3 KCU57_13805 PF00486 Transcriptional regulatory protein, C terminal KCU57_13805 PF00072 Response regulator receiver domain KCU57_13830 PF08281 Sigma-70, region 4 KCU57_13830 PF04542 Sigma-70 region 2 KCU57_13850 PF05656 Protein of unknown function (DUF805) KCU57_13855 PF18073 Rubredoxin metal binding domain KCU57_13860 PF00155 Aminotransferase class I and II KCU57_13870 PF03626 Prokaryotic Cytochrome C oxidase subunit IV KCU57_13875 PF00510 Cytochrome c oxidase subunit III KCU57_13880 PF00115 Cytochrome C and Quinol oxidase polypeptide I KCU57_13885 PF06481 COX Aromatic Rich Motif KCU57_13885 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KCU57_13920 PF02401 LytB protein KCU57_13925 PF01252 Signal peptidase (SPase) II KCU57_13930 PF00133 tRNA synthetases class I (I, L, M and V) KCU57_13930 PF06827 Zinc finger found in FPG and IleRS KCU57_13930 PF08264 Anticodon-binding domain of tRNA KCU57_13935 PF06574 FAD synthetase KCU57_13935 PF01687 Riboflavin kinase KCU57_13955 PF03023 Lipid II flippase MurJ KCU57_13960 PF01649 Ribosomal protein S20 KCU57_13965 PF01926 50S ribosome-binding GTPase KCU57_13965 PF01018 GTP1/OBG KCU57_13975 PF01016 Ribosomal L27 protein KCU57_13980 PF00829 Ribosomal prokaryotic L21 protein KCU57_13985 PF17760 UvrA interaction domain KCU57_13985 PF00005 ABC transporter KCU57_13985 PF17755 UvrA DNA-binding domain KCU57_14000 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KCU57_14000 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KCU57_14000 PF00378 Enoyl-CoA hydratase/isomerase KCU57_14020 PF04376 Arginine-tRNA-protein transferase, N terminus KCU57_14020 PF04377 Arginine-tRNA-protein transferase, C terminus KCU57_14030 PF02222 ATP-grasp domain KCU57_14030 PF01370 NAD dependent epimerase/dehydratase family KCU57_14055 PF13026 Protein of unknown function (DUF3887) KCU57_14055 PF12146 Serine aminopeptidase, S33 KCU57_14080 PF13291 ACT domain KCU57_14080 PF04607 Region found in RelA / SpoT proteins KCU57_14080 PF02824 TGS domain KCU57_14095 PF12706 Beta-lactamase superfamily domain KCU57_14100 PF03070 TENA/THI-4/PQQC family KCU57_14105 PF05402 Coenzyme PQQ synthesis protein D (PqqD) KCU57_14110 PF04055 Radical SAM superfamily KCU57_14110 PF13186 Iron-sulfur cluster-binding domain KCU57_14120 PF00654 Voltage gated chloride channel KCU57_14125 PF04408 Helicase associated domain (HA2) KCU57_14125 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold KCU57_14125 PF00271 Helicase conserved C-terminal domain KCU57_14125 PF11898 Domain of unknown function (DUF3418) KCU57_14125 PF00270 DEAD/DEAH box helicase KCU57_14130 PF00210 Ferritin-like domain KCU57_14135 PF00270 DEAD/DEAH box helicase KCU57_14135 PF00271 Helicase conserved C-terminal domain KCU57_14135 PF00570 HRDC domain KCU57_14135 PF16124 RecQ zinc-binding KCU57_14135 PF09382 RQC domain KCU57_14155 PF06508 Queuosine biosynthesis protein QueC KCU57_14160 PF04055 Radical SAM superfamily KCU57_14170 PF00691 OmpA family KCU57_14175 PF07676 WD40-like Beta Propeller Repeat KCU57_14175 PF04052 TolB amino-terminal domain KCU57_14185 PF02472 Biopolymer transport protein ExbD/TolR KCU57_14190 PF01618 MotA/TolQ/ExbB proton channel family KCU57_14195 PF03061 Thioesterase superfamily KCU57_14200 PF05496 Holliday junction DNA helicase RuvB P-loop domain KCU57_14200 PF17864 RuvB AAA lid domain KCU57_14200 PF05491 RuvB C-terminal winged helix domain KCU57_14205 PF02705 K+ potassium transporter KCU57_14210 PF07499 RuvA, C-terminal domain KCU57_14210 PF01330 RuvA N terminal domain KCU57_14215 PF02075 Crossover junction endodeoxyribonuclease RuvC KCU57_14220 PF01709 Transcriptional regulator KCU57_14240 PF02938 GAD domain KCU57_14240 PF00152 tRNA synthetases class II (D, K and N) KCU57_14240 PF01336 OB-fold nucleic acid binding domain KCU57_14260 PF03932 CutC family KCU57_14265 PF01112 Asparaginase KCU57_14270 PF05598 Transposase domain (DUF772) KCU57_14295 PF01339 CheB methylesterase KCU57_14295 PF00072 Response regulator receiver domain KCU57_14300 PF02895 Signal transducing histidine kinase, homodimeric domain KCU57_14300 PF00072 Response regulator receiver domain KCU57_14300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU57_14300 PF01584 CheW-like domain KCU57_14300 PF01627 Hpt domain KCU57_14305 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term KCU57_14305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KCU57_14310 PF01584 CheW-like domain KCU57_14315 PF00072 Response regulator receiver domain KCU57_14320 PF00072 Response regulator receiver domain KCU57_14325 PF02951 Prokaryotic glutathione synthetase, N-terminal domain KCU57_14325 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain KCU57_14335 PF00593 TonB dependent receptor KCU57_14340 PF03747 ADP-ribosylglycohydrolase KCU57_14345 PF00814 Glycoprotease family KCU57_14350 PF04851 Type III restriction enzyme, res subunit KCU57_14350 PF13307 Helicase C-terminal domain KCU57_14360 PF00912 Transglycosylase KCU57_14360 PF00905 Penicillin binding protein transpeptidase domain KCU57_14360 PF14814 Bifunctional transglycosylase second domain KCU57_14365 PF00535 Glycosyl transferase family 2 KCU57_14370 PF00730 HhH-GPD superfamily base excision DNA repair protein KCU57_14385 PF00196 Bacterial regulatory proteins, luxR family KCU57_14385 PF00072 Response regulator receiver domain KCU57_14390 PF07730 Histidine kinase KCU57_14400 PF05209 Septum formation inhibitor MinC, N-terminal domain KCU57_14400 PF03775 Septum formation inhibitor MinC, C-terminal domain KCU57_14405 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KCU57_14410 PF03776 Septum formation topological specificity factor MinE KCU57_14420 PF13493 Domain of unknown function (DUF4118) KCU57_14420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU57_14420 PF00512 His Kinase A (phospho-acceptor) domain KCU57_14420 PF02702 Osmosensitive K+ channel His kinase sensor domain KCU57_14425 PF00072 Response regulator receiver domain KCU57_14425 PF00486 Transcriptional regulatory protein, C terminal KCU57_14435 PF00884 Sulfatase KCU57_14435 PF08019 Phosphoethanolamine transferase EptA/EptB KCU57_14500 PF03412 Peptidase C39 family KCU57_14500 PF00005 ABC transporter KCU57_14500 PF00664 ABC transporter transmembrane region KCU57_14520 PF02347 Glycine cleavage system P-protein KCU57_14530 PF00199 Catalase KCU57_14530 PF06628 Catalase-related immune-responsive KCU57_14530 PF18011 C-terminal domain found in long catalases KCU57_14545 PF02585 GlcNAc-PI de-N-acetylase KCU57_14590 PF08240 Alcohol dehydrogenase GroES-like domain KCU57_14590 PF13823 Alcohol dehydrogenase GroES-associated KCU57_14590 PF00107 Zinc-binding dehydrogenase KCU57_14600 PF06165 Glycosyltransferase family 36 KCU57_14600 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain KCU57_14600 PF10091 Putative glucoamylase KCU57_14620 PF14310 Fibronectin type III-like domain KCU57_14620 PF00933 Glycosyl hydrolase family 3 N terminal domain KCU57_14620 PF01915 Glycosyl hydrolase family 3 C-terminal domain KCU57_14625 PF17755 UvrA DNA-binding domain KCU57_14695 PF02384 N-6 DNA Methylase KCU57_14710 PF01433 Peptidase family M1 domain KCU57_14725 PF00709 Adenylosuccinate synthetase KCU57_14735 PF01145 SPFH domain / Band 7 family KCU57_14740 PF01145 SPFH domain / Band 7 family KCU57_14740 PF12221 Bacterial membrane protein N terminal KCU57_14745 PF08240 Alcohol dehydrogenase GroES-like domain KCU57_14745 PF00107 Zinc-binding dehydrogenase KCU57_14750 PF00072 Response regulator receiver domain KCU57_14755 PF00226 DnaJ domain KCU57_14755 PF01556 DnaJ C terminal domain KCU57_14765 PF08534 Redoxin KCU57_14775 PF06832 Penicillin-Binding Protein C-terminus Family KCU57_14775 PF00912 Transglycosylase KCU57_14775 PF00905 Penicillin binding protein transpeptidase domain KCU57_14795 PF00207 Alpha-2-macroglobulin family KCU57_14795 PF07703 Alpha-2-macroglobulin bait region domain KCU57_14795 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain KCU57_14795 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain KCU57_14795 PF11974 Bacterial alpha-2-macroglobulin MG3 domain KCU57_14795 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain KCU57_14795 PF17962 Bacterial macroglobulin domain 6 KCU57_14795 PF01835 MG2 domain KCU57_14805 PF00593 TonB dependent receptor KCU57_14805 PF07715 TonB-dependent Receptor Plug Domain KCU57_14810 PF04303 PrpF protein KCU57_14825 PF00694 Aconitase C-terminal domain KCU57_14825 PF00330 Aconitase family (aconitate hydratase) KCU57_14830 PF00285 Citrate synthase, C-terminal domain KCU57_14840 PF00285 Citrate synthase, C-terminal domain KCU57_14895 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system KCU57_14900 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system KCU57_14910 PF05598 Transposase domain (DUF772) KCU57_14950 PF09115 DNA polymerase III, delta subunit, C terminal KCU57_14955 PF02223 Thymidylate kinase KCU57_14960 PF02618 YceG-like family KCU57_14965 PF00425 chorismate binding enzyme KCU57_14965 PF04715 Anthranilate synthase component I, N terminal region KCU57_14970 PF00109 Beta-ketoacyl synthase, N-terminal domain KCU57_14970 PF02801 Beta-ketoacyl synthase, C-terminal domain KCU57_14975 PF00550 Phosphopantetheine attachment site KCU57_14985 PF00698 Acyl transferase domain KCU57_14990 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KCU57_14990 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KCU57_14995 PF01783 Ribosomal L32p protein family KCU57_15000 PF02620 Large ribosomal RNA subunit accumulation protein YceD KCU57_15005 PF02545 Maf-like protein KCU57_15025 PF17863 AAA lid domain KCU57_15025 PF07726 ATPase family associated with various cellular activities (AAA) KCU57_15035 PF13559 Domain of unknown function (DUF4129) KCU57_15035 PF01841 Transglutaminase-like superfamily KCU57_15035 PF11992 Domain of unknown function (DUF3488) KCU57_15045 PF01230 HIT domain KCU57_15050 PF13662 Toprim domain KCU57_15050 PF02132 RecR protein KCU57_15055 PF02575 YbaB/EbfC DNA-binding family KCU57_15060 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding KCU57_15060 PF12169 DNA polymerase III subunits gamma and tau domain III KCU57_15060 PF12170 DNA polymerase III tau subunit V interacting with alpha KCU57_15145 PF05598 Transposase domain (DUF772) KCU57_15190 PF02391 MoaE protein KCU57_15195 PF02597 ThiS family KCU57_15200 PF01967 MoaC family KCU57_15210 PF06463 Molybdenum Cofactor Synthesis C KCU57_15210 PF04055 Radical SAM superfamily KCU57_15215 PF12706 Beta-lactamase superfamily domain KCU57_15225 PF01075 Glycosyltransferase family 9 (heptosyltransferase) KCU57_15310 PF00929 Exonuclease KCU57_15315 PF00075 RNase H KCU57_15325 PF16123 Hydroxyacylglutathione hydrolase C-terminus KCU57_15325 PF00753 Metallo-beta-lactamase superfamily KCU57_15330 PF05257 CHAP domain KCU57_15330 PF01476 LysM domain KCU57_15355 PF00216 Bacterial DNA-binding protein KCU57_15360 PF00004 ATPase family associated with various cellular activities (AAA) KCU57_15360 PF05362 Lon protease (S16) C-terminal proteolytic domain KCU57_15360 PF02190 ATP-dependent protease La (LON) substrate-binding domain KCU57_15365 PF07724 AAA domain (Cdc48 subfamily) KCU57_15365 PF10431 C-terminal, D2-small domain, of ClpB protein KCU57_15365 PF06689 ClpX C4-type zinc finger KCU57_15370 PF00574 Clp protease KCU57_15375 PF05697 Bacterial trigger factor protein (TF) KCU57_15375 PF05698 Bacterial trigger factor protein (TF) C-terminus KCU57_15420 PF18324 Hypothetical protein TT1725 KCU57_15420 PF00180 Isocitrate/isopropylmalate dehydrogenase KCU57_15430 PF00462 Glutaredoxin KCU57_15435 PF01435 Peptidase family M48 KCU57_15435 PF13181 Tetratricopeptide repeat KCU57_15440 PF00072 Response regulator receiver domain KCU57_15440 PF00486 Transcriptional regulatory protein, C terminal KCU57_15445 PF11808 Phosphate regulon sensor protein PhoR KCU57_15445 PF00989 PAS fold KCU57_15445 PF00512 His Kinase A (phospho-acceptor) domain KCU57_15445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU57_15450 PF13090 Polyphosphate kinase C-terminal domain 2 KCU57_15450 PF17941 Polyphosphate kinase C-terminal domain 1 KCU57_15450 PF13089 Polyphosphate kinase N-terminal domain KCU57_15450 PF02503 Polyphosphate kinase middle domain KCU57_15455 PF02541 Ppx/GppA phosphatase family KCU57_15460 PF00534 Glycosyl transferases group 1 KCU57_15460 PF13439 Glycosyltransferase Family 4 KCU57_15465 PF01569 PAP2 superfamily KCU57_15470 PF00149 Calcineurin-like phosphoesterase KCU57_15485 PF04305 Protein of unknown function (DUF455) KCU57_15490 PF00156 Phosphoribosyl transferase domain KCU57_15505 PF08245 Mur ligase middle domain KCU57_15505 PF02875 Mur ligase family, glutamate ligase domain KCU57_15510 PF00300 Histidine phosphatase superfamily (branch 1) KCU57_15515 PF10459 Peptidase S46 KCU57_15520 PF08240 Alcohol dehydrogenase GroES-like domain KCU57_15520 PF00107 Zinc-binding dehydrogenase KCU57_15530 PF12857 TOBE-like domain KCU57_15530 PF00005 ABC transporter KCU57_15530 PF17850 CysA C-terminal regulatory domain KCU57_15535 PF00528 Binding-protein-dependent transport system inner membrane component KCU57_15540 PF00528 Binding-protein-dependent transport system inner membrane component KCU57_15550 PF00155 Aminotransferase class I and II KCU57_15555 PF00849 RNA pseudouridylate synthase KCU57_15565 PF00223 Photosystem I psaA/psaB protein KCU57_15565 PF00691 OmpA family KCU57_15585 PF00248 Aldo/keto reductase family KCU57_15590 PF08240 Alcohol dehydrogenase GroES-like domain KCU57_15590 PF00107 Zinc-binding dehydrogenase KCU57_15600 PF07992 Pyridine nucleotide-disulphide oxidoreductase KCU57_15600 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KCU57_15625 PF03009 Glycerophosphoryl diester phosphodiesterase family KCU57_15645 PF02798 Glutathione S-transferase, N-terminal domain KCU57_15645 PF00043 Glutathione S-transferase, C-terminal domain KCU57_15650 PF16177 Acetyl-coenzyme A synthetase N-terminus KCU57_15650 PF00501 AMP-binding enzyme KCU57_15650 PF13193 AMP-binding enzyme C-terminal domain KCU57_15660 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KCU57_15660 PF00056 lactate/malate dehydrogenase, NAD binding domain KCU57_15670 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KCU57_15675 PF00009 Elongation factor Tu GTP binding domain KCU57_15675 PF03144 Elongation factor Tu domain 2 KCU57_15675 PF00679 Elongation factor G C-terminus KCU57_15690 PF01474 Class-II DAHP synthetase family KCU57_15700 PF02600 Disulfide bond formation protein DsbB KCU57_15705 PF01196 Ribosomal protein L17 KCU57_15710 PF01000 RNA polymerase Rpb3/RpoA insert domain KCU57_15710 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KCU57_15710 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KCU57_15715 PF00163 Ribosomal protein S4/S9 N-terminal domain KCU57_15715 PF01479 S4 domain KCU57_15720 PF00411 Ribosomal protein S11 KCU57_15725 PF00416 Ribosomal protein S13/S18 KCU57_15730 PF00344 SecY translocase KCU57_15735 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KCU57_15740 PF00327 Ribosomal protein L30p/L7e KCU57_15745 PF03719 Ribosomal protein S5, C-terminal domain KCU57_15745 PF00333 Ribosomal protein S5, N-terminal domain KCU57_15750 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast KCU57_15755 PF00347 Ribosomal protein L6 KCU57_15760 PF00410 Ribosomal protein S8 KCU57_15765 PF00253 Ribosomal protein S14p/S29e KCU57_15770 PF00673 ribosomal L5P family C-terminus KCU57_15770 PF00281 Ribosomal protein L5 KCU57_15775 PF00467 KOW motif KCU57_15775 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KCU57_15780 PF00238 Ribosomal protein L14p/L23e KCU57_15785 PF00366 Ribosomal protein S17 KCU57_15790 PF00831 Ribosomal L29 protein KCU57_15795 PF00252 Ribosomal protein L16p/L10e KCU57_15800 PF07650 KH domain KCU57_15800 PF00189 Ribosomal protein S3, C-terminal domain KCU57_15805 PF00237 Ribosomal protein L22p/L17e KCU57_15810 PF00203 Ribosomal protein S19 KCU57_15815 PF00181 Ribosomal Proteins L2, RNA binding domain KCU57_15815 PF03947 Ribosomal Proteins L2, C-terminal domain KCU57_15820 PF00276 Ribosomal protein L23 KCU57_15825 PF00573 Ribosomal protein L4/L1 family KCU57_15830 PF00297 Ribosomal protein L3 KCU57_15835 PF00338 Ribosomal protein S10p/S20e KCU57_15840 PF00009 Elongation factor Tu GTP binding domain KCU57_15840 PF03143 Elongation factor Tu C-terminal domain KCU57_15840 PF03144 Elongation factor Tu domain 2 KCU57_15845 PF03144 Elongation factor Tu domain 2 KCU57_15845 PF00009 Elongation factor Tu GTP binding domain KCU57_15845 PF14492 Elongation Factor G, domain II KCU57_15845 PF03764 Elongation factor G, domain IV KCU57_15845 PF00679 Elongation factor G C-terminus KCU57_15850 PF00177 Ribosomal protein S7p/S5e KCU57_15855 PF00164 Ribosomal protein S12/S23 KCU57_15860 PF05000 RNA polymerase Rpb1, domain 4 KCU57_15860 PF04998 RNA polymerase Rpb1, domain 5 KCU57_15860 PF04997 RNA polymerase Rpb1, domain 1 KCU57_15860 PF04983 RNA polymerase Rpb1, domain 3 KCU57_15860 PF00623 RNA polymerase Rpb1, domain 2 KCU57_15865 PF04563 RNA polymerase beta subunit KCU57_15865 PF04561 RNA polymerase Rpb2, domain 2 KCU57_15865 PF04565 RNA polymerase Rpb2, domain 3 KCU57_15865 PF10385 RNA polymerase beta subunit external 1 domain KCU57_15865 PF00562 RNA polymerase Rpb2, domain 6 KCU57_15865 PF04560 RNA polymerase Rpb2, domain 7 KCU57_15870 PF16320 Ribosomal protein L7/L12 dimerisation domain KCU57_15870 PF00542 Ribosomal protein L7/L12 C-terminal domain KCU57_15875 PF00466 Ribosomal protein L10 KCU57_15880 PF00687 Ribosomal protein L1p/L10e family KCU57_15885 PF00298 Ribosomal protein L11, RNA binding domain KCU57_15885 PF03946 Ribosomal protein L11, N-terminal domain KCU57_15890 PF00467 KOW motif KCU57_15890 PF02357 Transcription termination factor nusG KCU57_15895 PF00584 SecE/Sec61-gamma subunits of protein translocation complex KCU57_15905 PF03143 Elongation factor Tu C-terminal domain KCU57_15905 PF03144 Elongation factor Tu domain 2 KCU57_15905 PF00009 Elongation factor Tu GTP binding domain KCU57_15925 PF06071 Protein of unknown function (DUF933) KCU57_15925 PF01926 50S ribosome-binding GTPase KCU57_15930 PF01195 Peptidyl-tRNA hydrolase KCU57_15935 PF01386 Ribosomal L25p family KCU57_15935 PF14693 Ribosomal protein TL5, C-terminal domain KCU57_15940 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KCU57_15940 PF14572 Phosphoribosyl synthetase-associated domain KCU57_15950 PF00288 GHMP kinases N terminal domain KCU57_15950 PF08544 GHMP kinases C terminal KCU57_15955 PF03550 Outer membrane lipoprotein LolB KCU57_15965 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain KCU57_15965 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain KCU57_15965 PF01488 Shikimate / quinate 5-dehydrogenase KCU57_15970 PF03462 PCRF domain KCU57_15970 PF00472 RF-1 domain KCU57_15995 PF05506 Domain of unknown function (DUF756) KCU57_15995 PF04185 Phosphoesterase family KCU57_16010 PF03466 LysR substrate binding domain KCU57_16010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KCU57_16015 PF00005 ABC transporter KCU57_16015 PF12848 ABC transporter KCU57_16020 PF07715 TonB-dependent Receptor Plug Domain KCU57_16020 PF00593 TonB dependent receptor KCU57_16025 PF07715 TonB-dependent Receptor Plug Domain KCU57_16025 PF00593 TonB dependent receptor KCU57_16040 PF02534 Type IV secretory system Conjugative DNA transfer KCU57_16075 PF17827 PrmC N-terminal domain KCU57_16075 PF05175 Methyltransferase small domain KCU57_16080 PF00578 AhpC/TSA family KCU57_16080 PF10417 C-terminal domain of 1-Cys peroxiredoxin KCU57_16085 PF07992 Pyridine nucleotide-disulphide oxidoreductase KCU57_16085 PF13192 Thioredoxin domain KCU57_16090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KCU57_16090 PF03466 LysR substrate binding domain KCU57_16105 PF00923 Transaldolase/Fructose-6-phosphate aldolase KCU57_16110 PF01625 Peptide methionine sulfoxide reductase KCU57_16130 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain KCU57_16130 PF00749 tRNA synthetases class I (E and Q), catalytic domain KCU57_16135 PF00892 EamA-like transporter family KCU57_16155 PF01728 FtsJ-like methyltransferase KCU57_16155 PF18125 RlmM ferredoxin-like domain KCU57_16160 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KCU57_16160 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KCU57_16175 PF01494 FAD binding domain KCU57_16180 PF01494 FAD binding domain KCU57_16190 PF01923 Cobalamin adenosyltransferase KCU57_16195 PF00850 Histone deacetylase domain KCU57_16200 PF03968 OstA-like protein KCU57_16200 PF04453 LPS transport system D KCU57_16205 PF00639 PPIC-type PPIASE domain KCU57_16205 PF09312 SurA N-terminal domain KCU57_16210 PF04166 Pyridoxal phosphate biosynthetic protein PdxA KCU57_16215 PF00398 Ribosomal RNA adenine dimethylase KCU57_16220 PF04379 ApaG domain KCU57_16225 PF00149 Calcineurin-like phosphoesterase KCU57_16230 PF00186 Dihydrofolate reductase KCU57_16235 PF00303 Thymidylate synthase KCU57_16240 PF01790 Prolipoprotein diacylglyceryl transferase KCU57_16255 PF04011 LemA family KCU57_16260 PF03741 Integral membrane protein TerC family KCU57_16265 PF01219 Prokaryotic diacylglycerol kinase KCU57_16275 PF08521 Two-component sensor kinase N-terminal KCU57_16275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU57_16275 PF00512 His Kinase A (phospho-acceptor) domain KCU57_16280 PF00072 Response regulator receiver domain KCU57_16280 PF00486 Transcriptional regulatory protein, C terminal KCU57_16285 PF13472 GDSL-like Lipase/Acylhydrolase family KCU57_16290 PF00005 ABC transporter KCU57_16315 PF07715 TonB-dependent Receptor Plug Domain KCU57_16315 PF00593 TonB dependent receptor KCU57_16325 PF00248 Aldo/keto reductase family KCU57_16330 PF07670 Nucleoside recognition KCU57_16330 PF07662 Na+ dependent nucleoside transporter C-terminus KCU57_16330 PF01773 Na+ dependent nucleoside transporter N-terminus KCU57_16335 PF00294 pfkB family carbohydrate kinase KCU57_16335 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) KCU57_16350 PF01207 Dihydrouridine synthase (Dus) KCU57_16370 PF02772 S-adenosylmethionine synthetase, central domain KCU57_16370 PF02773 S-adenosylmethionine synthetase, C-terminal domain KCU57_16370 PF00438 S-adenosylmethionine synthetase, N-terminal domain KCU57_16375 PF00328 Histidine phosphatase superfamily (branch 2) KCU57_16400 PF00311 Phosphoenolpyruvate carboxylase KCU57_16405 PF05221 S-adenosyl-L-homocysteine hydrolase KCU57_16405 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KCU57_16435 PF02219 Methylenetetrahydrofolate reductase KCU57_16445 PF00293 NUDIX domain KCU57_16455 PF01043 SecA preprotein cross-linking domain KCU57_16455 PF07517 SecA DEAD-like domain KCU57_16455 PF02810 SEC-C motif KCU57_16455 PF07516 SecA Wing and Scaffold domain KCU57_16460 PF01551 Peptidase family M23 KCU57_16460 PF08525 Opacity-associated protein A N-terminal motif KCU57_16460 PF01476 LysM domain KCU57_16470 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase KCU57_16475 PF12327 FtsZ family, C-terminal domain KCU57_16475 PF00091 Tubulin/FtsZ family, GTPase domain KCU57_16480 PF02491 SHS2 domain inserted in FTSA KCU57_16485 PF03799 Cell division protein FtsQ KCU57_16485 PF08478 POTRA domain, FtsQ-type KCU57_16490 PF07478 D-ala D-ala ligase C-terminus KCU57_16490 PF01820 D-ala D-ala ligase N-terminus KCU57_16495 PF02875 Mur ligase family, glutamate ligase domain KCU57_16495 PF01225 Mur ligase family, catalytic domain KCU57_16495 PF08245 Mur ligase middle domain KCU57_16500 PF04101 Glycosyltransferase family 28 C-terminal domain KCU57_16500 PF03033 Glycosyltransferase family 28 N-terminal domain KCU57_16505 PF01098 Cell cycle protein KCU57_16510 PF00953 Glycosyl transferase family 4 KCU57_16515 PF01225 Mur ligase family, catalytic domain KCU57_16515 PF02875 Mur ligase family, glutamate ligase domain KCU57_16515 PF08245 Mur ligase middle domain KCU57_16520 PF08245 Mur ligase middle domain KCU57_16520 PF01225 Mur ligase family, catalytic domain KCU57_16520 PF02875 Mur ligase family, glutamate ligase domain KCU57_16525 PF03717 Penicillin-binding Protein dimerisation domain KCU57_16525 PF00905 Penicillin binding protein transpeptidase domain KCU57_16530 PF04999 Cell division protein FtsL KCU57_16535 PF01795 MraW methylase family KCU57_16540 PF02381 MraZ protein, putative antitoxin-like KCU57_16560 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KCU57_16570 PF02021 Uncharacterised protein family UPF0102 KCU57_16575 PF01565 FAD binding domain KCU57_16575 PF02913 FAD linked oxidases, C-terminal domain KCU57_16580 PF00486 Transcriptional regulatory protein, C terminal KCU57_16580 PF00072 Response regulator receiver domain KCU57_16585 PF02702 Osmosensitive K+ channel His kinase sensor domain KCU57_16585 PF13493 Domain of unknown function (DUF4118) KCU57_16585 PF13492 GAF domain KCU57_16585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU57_16585 PF00512 His Kinase A (phospho-acceptor) domain KCU57_16590 PF02669 K+-transporting ATPase, c chain KCU57_16600 PF03814 Potassium-transporting ATPase A subunit KCU57_16620 PF02769 AIR synthase related protein, C-terminal domain KCU57_16620 PF00586 AIR synthase related protein, N-terminal domain KCU57_16625 PF01029 NusB family KCU57_16630 PF00885 6,7-dimethyl-8-ribityllumazine synthase KCU57_16635 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KCU57_16635 PF00925 GTP cyclohydrolase II KCU57_16640 PF00677 Lumazine binding domain KCU57_16645 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KCU57_16645 PF01872 RibD C-terminal domain KCU57_16655 PF03477 ATP cone domain KCU57_16660 PF00464 Serine hydroxymethyltransferase KCU57_16685 PF07690 Major Facilitator Superfamily KCU57_16690 PF00005 ABC transporter KCU57_16690 PF12848 ABC transporter KCU57_16695 PF01327 Polypeptide deformylase KCU57_16705 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KCU57_16705 PF02770 Acyl-CoA dehydrogenase, middle domain KCU57_16705 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KCU57_16715 PF13193 AMP-binding enzyme C-terminal domain KCU57_16715 PF00501 AMP-binding enzyme KCU57_16720 PF00550 Phosphopantetheine attachment site KCU57_16725 PF03062 MBOAT, membrane-bound O-acyltransferase family KCU57_16730 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX KCU57_16745 PF13632 Glycosyl transferase family group 2 KCU57_16745 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KCU57_16755 PF02350 UDP-N-acetylglucosamine 2-epimerase KCU57_16760 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KCU57_16760 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain KCU57_16795 PF07715 TonB-dependent Receptor Plug Domain KCU57_16795 PF00593 TonB dependent receptor KCU57_16805 PF00392 Bacterial regulatory proteins, gntR family KCU57_16805 PF07702 UTRA domain KCU57_16815 PF00263 Bacterial type II and III secretion system protein KCU57_16815 PF03958 Bacterial type II/III secretion system short domain KCU57_16825 PF10741 Type II secretion system (T2SS), protein M subtype b KCU57_16830 PF05137 Fimbrial assembly protein (PilN) KCU57_16835 PF03934 Type II secretion system (T2SS), protein K KCU57_16845 PF07963 Prokaryotic N-terminal methylation motif KCU57_16850 PF12019 Type II transport protein GspH KCU57_16855 PF08334 Type II secretion system (T2SS), protein G KCU57_16860 PF00482 Type II secretion system (T2SS), protein F KCU57_16865 PF00437 Type II/IV secretion system protein KCU57_16865 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KCU57_16870 PF00082 Subtilase family KCU57_16870 PF04151 Bacterial pre-peptidase C-terminal domain KCU57_16875 PF05662 Coiled stalk of trimeric autotransporter adhesin KCU57_16875 PF03895 YadA-like membrane anchor domain KCU57_16875 PF05658 Head domain of trimeric autotransporter adhesin KCU57_16875 PF13018 Extended Signal Peptide of Type V secretion system KCU57_16885 PF02203 Tar ligand binding domain homologue KCU57_16885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KCU57_16885 PF00672 HAMP domain KCU57_16890 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal KCU57_16890 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain KCU57_16890 PF02769 AIR synthase related protein, C-terminal domain KCU57_16895 PF10411 Disulfide bond isomerase protein N-terminus KCU57_16895 PF13098 Thioredoxin-like domain KCU57_16900 PF00589 Phage integrase family KCU57_16900 PF02899 Phage integrase, N-terminal SAM-like domain KCU57_16925 PF00883 Cytosol aminopeptidase family, catalytic domain KCU57_16925 PF02789 Cytosol aminopeptidase family, N-terminal domain KCU57_16935 PF08264 Anticodon-binding domain of tRNA KCU57_16935 PF00133 tRNA synthetases class I (I, L, M and V) KCU57_16935 PF10458 Valyl tRNA synthetase tRNA binding arm KCU57_16960 PF01066 CDP-alcohol phosphatidyltransferase KCU57_16970 PF03129 Anticodon binding domain KCU57_16970 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KCU57_16970 PF04073 Aminoacyl-tRNA editing domain KCU57_16975 PF00816 H-NS histone family KCU57_16985 PF02405 Permease MlaE KCU57_16990 PF00005 ABC transporter KCU57_16995 PF02470 MlaD protein KCU57_16995 PF03886 ABC-type transport auxiliary lipoprotein component KCU57_17015 PF14307 Glycosyltransferase WbsX KCU57_17015 PF05045 Rhamnan synthesis protein F KCU57_17020 PF01144 Coenzyme A transferase KCU57_17025 PF01144 Coenzyme A transferase KCU57_17030 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KCU57_17030 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KCU57_17030 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KCU57_17030 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KCU57_17035 PF01050 Mannose-6-phosphate isomerase KCU57_17035 PF00483 Nucleotidyl transferase KCU57_17040 PF04321 RmlD substrate binding domain KCU57_17045 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase KCU57_17050 PF00483 Nucleotidyl transferase KCU57_17055 PF16363 GDP-mannose 4,6 dehydratase KCU57_17060 PF01012 Electron transfer flavoprotein domain KCU57_17065 PF01012 Electron transfer flavoprotein domain KCU57_17065 PF00766 Electron transfer flavoprotein FAD-binding domain KCU57_17075 PF01040 UbiA prenyltransferase family KCU57_17080 PF04030 D-arabinono-1,4-lactone oxidase KCU57_17080 PF01565 FAD binding domain KCU57_17085 PF00106 short chain dehydrogenase KCU57_17090 PF01370 NAD dependent epimerase/dehydratase family KCU57_17110 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KCU57_17110 PF07992 Pyridine nucleotide-disulphide oxidoreductase KCU57_17130 PF00535 Glycosyl transferase family 2 KCU57_17135 PF00535 Glycosyl transferase family 2 KCU57_17140 PF00398 Ribosomal RNA adenine dimethylase KCU57_17145 PF00005 ABC transporter KCU57_17155 PF01053 Cys/Met metabolism PLP-dependent enzyme KCU57_17160 PF00571 CBS domain KCU57_17160 PF00291 Pyridoxal-phosphate dependent enzyme KCU57_17180 PF00437 Type II/IV secretion system protein KCU57_17185 PF14497 Glutathione S-transferase, C-terminal domain KCU57_17185 PF02798 Glutathione S-transferase, N-terminal domain KCU57_17195 PF00270 DEAD/DEAH box helicase KCU57_17195 PF00271 Helicase conserved C-terminal domain KCU57_17200 PF01242 6-pyruvoyl tetrahydropterin synthase KCU57_17215 PF13185 GAF domain KCU57_17225 PF07715 TonB-dependent Receptor Plug Domain KCU57_17225 PF00593 TonB dependent receptor KCU57_17230 PF13419 Haloacid dehalogenase-like hydrolase KCU57_17235 PF11798 IMS family HHH motif KCU57_17235 PF11799 impB/mucB/samB family C-terminal domain KCU57_17235 PF00817 impB/mucB/samB family KCU57_17240 PF07977 FabA-like domain KCU57_17245 PF00109 Beta-ketoacyl synthase, N-terminal domain KCU57_17245 PF02801 Beta-ketoacyl synthase, C-terminal domain KCU57_17255 PF01432 Peptidase family M3 KCU57_17260 PF00291 Pyridoxal-phosphate dependent enzyme KCU57_17270 PF00403 Heavy-metal-associated domain KCU57_17275 PF09278 MerR, DNA binding KCU57_17275 PF00376 MerR family regulatory protein KCU57_17285 PF00394 Multicopper oxidase KCU57_17285 PF07731 Multicopper oxidase KCU57_17285 PF07732 Multicopper oxidase KCU57_17290 PF05275 Copper resistance protein B precursor (CopB) KCU57_17300 PF01380 SIS domain KCU57_17320 PF00132 Bacterial transferase hexapeptide (six repeats) KCU57_17320 PF12804 MobA-like NTP transferase domain KCU57_17320 PF14602 Hexapeptide repeat of succinyl-transferase KCU57_17335 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain KCU57_17335 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain KCU57_17340 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KCU57_17340 PF02874 ATP synthase alpha/beta family, beta-barrel domain KCU57_17345 PF00231 ATP synthase KCU57_17350 PF02874 ATP synthase alpha/beta family, beta-barrel domain KCU57_17350 PF00306 ATP synthase alpha/beta chain, C terminal domain KCU57_17350 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KCU57_17355 PF00213 ATP synthase delta (OSCP) subunit KCU57_17360 PF00430 ATP synthase B/B' CF(0) KCU57_17365 PF00137 ATP synthase subunit C KCU57_17370 PF00119 ATP synthase A chain KCU57_17385 PF07992 Pyridine nucleotide-disulphide oxidoreductase KCU57_17385 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KCU57_17390 PF00364 Biotin-requiring enzyme KCU57_17390 PF02817 e3 binding domain KCU57_17390 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KCU57_17415 PF03180 NLPA lipoprotein KCU57_17420 PF00528 Binding-protein-dependent transport system inner membrane component KCU57_17425 PF00005 ABC transporter KCU57_17425 PF09383 NIL domain KCU57_17430 PF00892 EamA-like transporter family KCU57_17435 PF04461 Protein of unknown function (DUF520) KCU57_17445 PF00849 RNA pseudouridylate synthase KCU57_17445 PF01479 S4 domain KCU57_17450 PF08468 Methyltransferase small domain N-terminal KCU57_17450 PF05175 Methyltransferase small domain KCU57_17460 PF07995 Glucose / Sorbosone dehydrogenase KCU57_17470 PF01627 Hpt domain KCU57_17470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU57_17470 PF00512 His Kinase A (phospho-acceptor) domain KCU57_17470 PF00989 PAS fold KCU57_17470 PF00072 Response regulator receiver domain KCU57_17470 PF00497 Bacterial extracellular solute-binding proteins, family 3 KCU57_17490 PF01168 Alanine racemase, N-terminal domain KCU57_17490 PF00842 Alanine racemase, C-terminal domain KCU57_17495 PF01266 FAD dependent oxidoreductase KCU57_17500 PF01037 Lrp/AsnC ligand binding domain KCU57_17515 PF01641 SelR domain KCU57_17520 PF01618 MotA/TolQ/ExbB proton channel family KCU57_17525 PF13677 Membrane MotB of proton-channel complex MotA/MotB KCU57_17525 PF00691 OmpA family KCU57_17555 PF01061 ABC-2 type transporter KCU57_17560 PF00005 ABC transporter KCU57_17565 PF00999 Sodium/hydrogen exchanger family KCU57_17570 PF05711 Macrocin-O-methyltransferase (TylF) KCU57_17575 PF02469 Fasciclin domain KCU57_17580 PF03167 Uracil DNA glycosylase superfamily KCU57_17590 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase KCU57_17595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KCU57_17595 PF03466 LysR substrate binding domain KCU57_17600 PF03358 NADPH-dependent FMN reductase KCU57_17615 PF00248 Aldo/keto reductase family KCU57_17625 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KCU57_17625 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KCU57_17630 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family KCU57_17650 PF00990 Diguanylate cyclase, GGDEF domain KCU57_17650 PF17151 Periplasmic sensor domain KCU57_17655 PF00355 Rieske [2Fe-2S] domain KCU57_17660 PF08448 PAS fold KCU57_17660 PF08447 PAS fold KCU57_17660 PF00563 EAL domain KCU57_17660 PF00990 Diguanylate cyclase, GGDEF domain KCU57_17685 PF08889 WbqC-like protein family KCU57_17690 PF00535 Glycosyl transferase family 2 KCU57_17695 PF13649 Methyltransferase domain KCU57_17705 PF00892 EamA-like transporter family KCU57_17715 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KCU57_17725 PF00593 TonB dependent receptor KCU57_17725 PF07715 TonB-dependent Receptor Plug Domain KCU57_17735 PF00072 Response regulator receiver domain KCU57_17735 PF04397 LytTr DNA-binding domain KCU57_17740 PF07694 5TMR of 5TMR-LYT KCU57_17740 PF06580 Histidine kinase KCU57_17745 PF04199 Putative cyclase KCU57_17765 PF13520 Amino acid permease KCU57_17780 PF00553 Cellulose binding domain KCU57_17780 PF00150 Cellulase (glycosyl hydrolase family 5) KCU57_17790 PF01204 Trehalase KCU57_17795 PF01464 Transglycosylase SLT domain KCU57_17805 PF00497 Bacterial extracellular solute-binding proteins, family 3 KCU57_17820 PF01544 CorA-like Mg2+ transporter protein KCU57_17825 PF00324 Amino acid permease KCU57_17830 PF00892 EamA-like transporter family KCU57_17845 PF07759 Protein of unknown function (DUF1615) KCU57_17850 PF08532 Beta-galactosidase trimerisation domain KCU57_17850 PF02449 Beta-galactosidase KCU57_17850 PF08533 Beta-galactosidase C-terminal domain KCU57_17855 PF00561 alpha/beta hydrolase fold KCU57_17920 PF00145 C-5 cytosine-specific DNA methylase KCU57_17930 PF05598 Transposase domain (DUF772) KCU57_17960 PF13614 AAA domain KCU57_17965 PF17831 Pyruvate dehydrogenase E1 component middle domain KCU57_17965 PF00456 Transketolase, thiamine diphosphate binding domain KCU57_17970 PF00672 HAMP domain KCU57_17970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KCU57_17970 PF02743 Cache domain KCU57_17985 PF04264 YceI-like domain KCU57_17990 PF00881 Nitroreductase family KCU57_18015 PF03009 Glycerophosphoryl diester phosphodiesterase family KCU57_18030 PF08335 GlnD PII-uridylyltransferase KCU57_18030 PF03710 Glutamate-ammonia ligase adenylyltransferase KCU57_18040 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain KCU57_18040 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain KCU57_18045 PF01541 GIY-YIG catalytic domain KCU57_18050 PF00793 DAHP synthetase I family KCU57_18055 PF00118 TCP-1/cpn60 chaperonin family KCU57_18060 PF00166 Chaperonin 10 Kd subunit KCU57_18070 PF03091 CutA1 divalent ion tolerance protein KCU57_18075 PF11412 Disulphide bond corrector protein DsbC KCU57_18075 PF02683 Cytochrome C biogenesis protein transmembrane region KCU57_18080 PF00578 AhpC/TSA family KCU57_18090 PF01220 Dehydroquinase class II KCU57_18095 PF00364 Biotin-requiring enzyme KCU57_18100 PF02785 Biotin carboxylase C-terminal domain KCU57_18100 PF00289 Biotin carboxylase, N-terminal domain KCU57_18100 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KCU57_18125 PF01381 Helix-turn-helix KCU57_18135 PF02954 Bacterial regulatory protein, Fis family KCU57_18160 PF12147 Putative methyltransferase KCU57_18160 PF12146 Serine aminopeptidase, S33 KCU57_18170 PF02142 MGS-like domain KCU57_18170 PF01808 AICARFT/IMPCHase bienzyme KCU57_18175 PF02843 Phosphoribosylglycinamide synthetase, C domain KCU57_18175 PF02844 Phosphoribosylglycinamide synthetase, N domain KCU57_18175 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KCU57_18185 PF12805 FUSC-like inner membrane protein yccS KCU57_18190 PF07690 Major Facilitator Superfamily KCU57_18195 PF03466 LysR substrate binding domain KCU57_18195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KCU57_18230 PF09297 NADH pyrophosphatase zinc ribbon domain KCU57_18230 PF00293 NUDIX domain KCU57_18230 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain KCU57_18235 PF01521 Iron-sulphur cluster biosynthesis KCU57_18255 PF00072 Response regulator receiver domain KCU57_18255 PF00990 Diguanylate cyclase, GGDEF domain KCU57_18255 PF00563 EAL domain KCU57_18260 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KCU57_18260 PF01627 Hpt domain KCU57_18260 PF00512 His Kinase A (phospho-acceptor) domain KCU57_18260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU57_18260 PF00072 Response regulator receiver domain KCU57_18260 PF00672 HAMP domain KCU57_18265 PF00210 Ferritin-like domain KCU57_18270 PF04324 BFD-like [2Fe-2S] binding domain KCU57_18275 PF00293 NUDIX domain KCU57_18290 PF00380 Ribosomal protein S9/S16 KCU57_18295 PF00572 Ribosomal protein L13 KCU57_18300 PF03232 Ubiquinone biosynthesis protein COQ7 KCU57_18310 PF00893 Small Multidrug Resistance protein KCU57_18315 PF02675 S-adenosylmethionine decarboxylase KCU57_18320 PF00325 Bacterial regulatory proteins, crp family KCU57_18320 PF00027 Cyclic nucleotide-binding domain KCU57_18325 PF01925 Sulfite exporter TauE/SafE KCU57_18340 PF00218 Indole-3-glycerol phosphate synthase KCU57_18345 PF02885 Glycosyl transferase family, helical bundle domain KCU57_18345 PF00591 Glycosyl transferase family, a/b domain KCU57_18350 PF00117 Glutamine amidotransferase class-I KCU57_18360 PF04715 Anthranilate synthase component I, N terminal region KCU57_18360 PF00425 chorismate binding enzyme KCU57_18365 PF00781 Diacylglycerol kinase catalytic domain KCU57_18370 PF00583 Acetyltransferase (GNAT) family KCU57_18375 PF00834 Ribulose-phosphate 3 epimerase family KCU57_18380 PF00226 DnaJ domain KCU57_18380 PF05099 Tellurite resistance protein TerB KCU57_18385 PF01259 SAICAR synthetase KCU57_18395 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family KCU57_18400 PF13244 Domain of unknown function (DUF4040) KCU57_18400 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter KCU57_18400 PF00361 Proton-conducting membrane transporter KCU57_18400 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KCU57_18405 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KCU57_18410 PF00361 Proton-conducting membrane transporter KCU57_18420 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) KCU57_18425 PF03334 Na+/H+ antiporter subunit KCU57_18430 PF01699 Sodium/calcium exchanger protein KCU57_18445 PF04209 homogentisate 1,2-dioxygenase KCU57_18450 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KCU57_18465 PF00854 POT family KCU57_18470 PF03301 Tryptophan 2,3-dioxygenase KCU57_18485 PF00676 Dehydrogenase E1 component KCU57_18490 PF02779 Transketolase, pyrimidine binding domain KCU57_18490 PF02780 Transketolase, C-terminal domain KCU57_18500 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KCU57_18500 PF00364 Biotin-requiring enzyme KCU57_18500 PF02817 e3 binding domain KCU57_18515 PF07504 Fungalysin/Thermolysin Propeptide Motif KCU57_18515 PF03413 Peptidase propeptide and YPEB domain KCU57_18515 PF01447 Thermolysin metallopeptidase, catalytic domain KCU57_18515 PF02868 Thermolysin metallopeptidase, alpha-helical domain KCU57_18515 PF04151 Bacterial pre-peptidase C-terminal domain KCU57_18520 PF00271 Helicase conserved C-terminal domain KCU57_18520 PF00270 DEAD/DEAH box helicase KCU57_18535 PF00294 pfkB family carbohydrate kinase KCU57_18540 PF00990 Diguanylate cyclase, GGDEF domain KCU57_18545 PF05661 Protein of unknown function (DUF808) KCU57_18550 PF02734 DAK2 domain KCU57_18550 PF02733 Dak1 domain KCU57_18555 PF02733 Dak1 domain KCU57_18555 PF02734 DAK2 domain KCU57_18565 PF03109 ABC1 family KCU57_18570 PF00924 Mechanosensitive ion channel KCU57_18570 PF12795 Mechanosensitive ion channel porin domain KCU57_18570 PF12794 Mechanosensitive ion channel inner membrane domain 1 KCU57_18575 PF00698 Acyl transferase domain KCU57_18575 PF08240 Alcohol dehydrogenase GroES-like domain KCU57_18575 PF00107 Zinc-binding dehydrogenase KCU57_18575 PF14765 Polyketide synthase dehydratase KCU57_18575 PF08659 KR domain KCU57_18575 PF16197 Ketoacyl-synthetase C-terminal extension KCU57_18575 PF02801 Beta-ketoacyl synthase, C-terminal domain KCU57_18575 PF00109 Beta-ketoacyl synthase, N-terminal domain KCU57_18575 PF00550 Phosphopantetheine attachment site KCU57_18580 PF00328 Histidine phosphatase superfamily (branch 2) KCU57_18595 PF04542 Sigma-70 region 2 KCU57_18595 PF08281 Sigma-70, region 4 KCU57_18595 PF12680 SnoaL-like domain KCU57_18600 PF02678 Pirin KCU57_18600 PF05726 Pirin C-terminal cupin domain KCU57_18615 PF07729 FCD domain KCU57_18615 PF00392 Bacterial regulatory proteins, gntR family KCU57_18630 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase KCU57_18635 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG KCU57_18645 PF01039 Carboxyl transferase domain KCU57_18650 PF06857 Malonate decarboxylase delta subunit (MdcD) KCU57_18655 PF16957 Malonate decarboxylase, alpha subunit, transporter KCU57_18660 PF09339 IclR helix-turn-helix domain KCU57_18660 PF01614 Bacterial transcriptional regulator KCU57_18665 PF07690 Major Facilitator Superfamily KCU57_18670 PF05336 L-rhamnose mutarotase KCU57_18675 PF13378 Enolase C-terminal domain-like KCU57_18675 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KCU57_18680 PF01557 Fumarylacetoacetate (FAA) hydrolase family KCU57_18695 PF00248 Aldo/keto reductase family KCU57_18700 PF13419 Haloacid dehalogenase-like hydrolase KCU57_18710 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KCU57_18710 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KCU57_18715 PF00230 Major intrinsic protein KCU57_18720 PF01266 FAD dependent oxidoreductase KCU57_18720 PF16901 C-terminal domain of alpha-glycerophosphate oxidase KCU57_18725 PF00455 DeoR C terminal sensor domain KCU57_18725 PF08220 DeoR-like helix-turn-helix domain KCU57_18730 PF07308 Protein of unknown function (DUF1456) KCU57_18750 PF07715 TonB-dependent Receptor Plug Domain KCU57_18750 PF00593 TonB dependent receptor KCU57_18765 PF00326 Prolyl oligopeptidase family KCU57_18765 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region KCU57_18780 PF07715 TonB-dependent Receptor Plug Domain KCU57_18780 PF00593 TonB dependent receptor KCU57_18825 PF00595 PDZ domain KCU57_18825 PF13180 PDZ domain KCU57_18845 PF01594 AI-2E family transporter KCU57_18850 PF13419 Haloacid dehalogenase-like hydrolase KCU57_18855 PF00883 Cytosol aminopeptidase family, catalytic domain KCU57_18855 PF02789 Cytosol aminopeptidase family, N-terminal domain KCU57_18860 PF00199 Catalase KCU57_18885 PF00005 ABC transporter KCU57_18890 PF12704 MacB-like periplasmic core domain KCU57_18890 PF02687 FtsX-like permease family KCU57_18905 PF00892 EamA-like transporter family KCU57_18910 PF00892 EamA-like transporter family KCU57_18920 PF00753 Metallo-beta-lactamase superfamily KCU57_18925 PF00579 tRNA synthetases class I (W and Y) KCU57_18945 PF00491 Arginase family KCU57_18960 PF03309 Type III pantothenate kinase KCU57_18965 PF03099 Biotin/lipoate A/B protein ligase family KCU57_18965 PF02237 Biotin protein ligase C terminal domain KCU57_18975 PF06167 Glucose-regulated metallo-peptidase M90 KCU57_18990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU57_18995 PF00486 Transcriptional regulatory protein, C terminal KCU57_18995 PF00072 Response regulator receiver domain KCU57_19005 PF01207 Dihydrouridine synthase (Dus) KCU57_19010 PF01717 Cobalamin-independent synthase, Catalytic domain KCU57_19010 PF08267 Cobalamin-independent synthase, N-terminal domain KCU57_19020 PF00551 Formyl transferase KCU57_19030 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KCU57_19030 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KCU57_19035 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KCU57_19040 PF02146 Sir2 family KCU57_19045 PF07690 Major Facilitator Superfamily KCU57_19050 PF03466 LysR substrate binding domain KCU57_19050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KCU57_19065 PF00268 Ribonucleotide reductase, small chain KCU57_19070 PF00317 Ribonucleotide reductase, all-alpha domain KCU57_19070 PF02867 Ribonucleotide reductase, barrel domain KCU57_19070 PF03477 ATP cone domain KCU57_19080 PF02566 OsmC-like protein KCU57_19085 PF01047 MarR family KCU57_19090 PF03969 AFG1-like ATPase KCU57_19105 PF07683 Cobalamin synthesis protein cobW C-terminal domain KCU57_19105 PF02492 CobW/HypB/UreG, nucleotide-binding domain KCU57_19115 PF02694 Uncharacterised BCR, YnfA/UPF0060 family KCU57_19125 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KCU57_19135 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KCU57_19135 PF02770 Acyl-CoA dehydrogenase, middle domain KCU57_19135 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KCU57_19140 PF01039 Carboxyl transferase domain KCU57_19145 PF00364 Biotin-requiring enzyme KCU57_19145 PF00289 Biotin carboxylase, N-terminal domain KCU57_19145 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KCU57_19145 PF02785 Biotin carboxylase C-terminal domain KCU57_19155 PF00313 'Cold-shock' DNA-binding domain KCU57_19165 PF13607 Succinyl-CoA ligase like flavodoxin domain KCU57_19165 PF13380 CoA binding domain KCU57_19165 PF00583 Acetyltransferase (GNAT) family KCU57_19175 PF01654 Cytochrome bd terminal oxidase subunit I KCU57_19180 PF02322 Cytochrome bd terminal oxidase subunit II KCU57_19200 PF04820 Tryptophan halogenase KCU57_19205 PF00550 Phosphopantetheine attachment site KCU57_19220 PF07977 FabA-like domain KCU57_19245 PF00106 short chain dehydrogenase KCU57_19250 PF01494 FAD binding domain KCU57_19255 PF00535 Glycosyl transferase family 2 KCU57_19265 PF02801 Beta-ketoacyl synthase, C-terminal domain KCU57_19265 PF00109 Beta-ketoacyl synthase, N-terminal domain KCU57_19270 PF05166 YcgL domain KCU57_19285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU57_19285 PF00512 His Kinase A (phospho-acceptor) domain KCU57_19285 PF08448 PAS fold KCU57_19285 PF13188 PAS domain KCU57_19285 PF00072 Response regulator receiver domain KCU57_19290 PF00072 Response regulator receiver domain KCU57_19290 PF00486 Transcriptional regulatory protein, C terminal KCU57_19295 PF00723 Glycosyl hydrolases family 15 KCU57_19300 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain KCU57_19300 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain KCU57_19315 PF01218 Coproporphyrinogen III oxidase KCU57_19325 PF04239 Protein of unknown function (DUF421) KCU57_19330 PF01367 5'-3' exonuclease, C-terminal SAM fold KCU57_19330 PF00476 DNA polymerase family A KCU57_19330 PF01612 3'-5' exonuclease KCU57_19330 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KCU57_19345 PF00582 Universal stress protein family KCU57_19350 PF12464 Maltose acetyltransferase KCU57_19350 PF14602 Hexapeptide repeat of succinyl-transferase KCU57_19375 PF00580 UvrD/REP helicase N-terminal domain KCU57_19375 PF13361 UvrD-like helicase C-terminal domain KCU57_19385 PF13396 Phospholipase_D-nuclease N-terminal KCU57_19385 PF13091 PLD-like domain KCU57_19390 PF00471 Ribosomal protein L33 KCU57_19395 PF00830 Ribosomal L28 family KCU57_19430 PF00535 Glycosyl transferase family 2 KCU57_19435 PF01370 NAD dependent epimerase/dehydratase family KCU57_19440 PF02195 ParB-like nuclease domain KCU57_19440 PF17762 HTH domain found in ParB protein KCU57_19445 PF13614 AAA domain KCU57_19450 PF02527 rRNA small subunit methyltransferase G KCU57_19455 PF01648 4'-phosphopantetheinyl transferase superfamily KCU57_19460 PF04226 Transglycosylase associated protein KCU57_19475 PF00171 Aldehyde dehydrogenase family KCU57_19480 PF07690 Major Facilitator Superfamily KCU57_19480 PF00083 Sugar (and other) transporter KCU57_19490 PF16177 Acetyl-coenzyme A synthetase N-terminus KCU57_19490 PF13193 AMP-binding enzyme C-terminal domain KCU57_19490 PF00501 AMP-binding enzyme KCU57_19495 PF00072 Response regulator receiver domain KCU57_19495 PF00196 Bacterial regulatory proteins, luxR family KCU57_19500 PF02659 Putative manganese efflux pump KCU57_19505 PF00512 His Kinase A (phospho-acceptor) domain KCU57_19505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KCU57_19515 PF01434 Peptidase family M41 KCU57_19515 PF17862 AAA+ lid domain KCU57_19515 PF00004 ATPase family associated with various cellular activities (AAA) KCU57_19520 PF06165 Glycosyltransferase family 36 KCU57_19520 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain KCU57_19535 PF04357 TamB, inner membrane protein subunit of TAM complex KCU57_19540 PF01103 Surface antigen KCU57_19540 PF07244 Surface antigen variable number repeat KCU57_19540 PF17243 POTRA domain TamA domain 1 KCU57_19565 PF04337 Protein of unknown function, DUF480 KCU57_19585 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KCU57_19590 PF04820 Tryptophan halogenase KCU57_19600 PF00356 Bacterial regulatory proteins, lacI family KCU57_19610 PF01553 Acyltransferase KCU57_19630 PF04616 Glycosyl hydrolases family 43 KCU57_19650 PF03422 Carbohydrate binding module (family 6) KCU57_19650 PF00553 Cellulose binding domain KCU57_19650 PF00331 Glycosyl hydrolase family 10 KCU57_19655 PF02614 Glucuronate isomerase KCU57_19660 PF00331 Glycosyl hydrolase family 10 KCU57_19670 PF08450 SMP-30/Gluconolactonase/LRE-like region KCU57_19690 PF01232 Mannitol dehydrogenase Rossmann domain KCU57_19690 PF08125 Mannitol dehydrogenase C-terminal domain KCU57_19695 PF01915 Glycosyl hydrolase family 3 C-terminal domain KCU57_19695 PF07691 PA14 domain KCU57_19695 PF14310 Fibronectin type III-like domain KCU57_19695 PF00933 Glycosyl hydrolase family 3 N terminal domain KCU57_19700 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain KCU57_19700 PF04616 Glycosyl hydrolases family 43 KCU57_19705 PF13378 Enolase C-terminal domain-like KCU57_19705 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KCU57_19715 PF07477 Glycosyl hydrolase family 67 C-terminus KCU57_19715 PF07488 Glycosyl hydrolase family 67 middle domain KCU57_19715 PF03648 Glycosyl hydrolase family 67 N-terminus KCU57_19720 PF00356 Bacterial regulatory proteins, lacI family KCU57_19730 PF01171 PP-loop family KCU57_19735 PF04381 Putative exonuclease, RdgC KCU57_19745 PF12697 Alpha/beta hydrolase family KCU57_19750 PF00762 Ferrochelatase KCU57_19760 PF02416 mttA/Hcf106 family KCU57_19765 PF02416 mttA/Hcf106 family KCU57_19770 PF00902 Sec-independent protein translocase protein (TatC) KCU57_19780 PF00117 Glutamine amidotransferase class-I KCU57_19780 PF00958 GMP synthase C terminal domain KCU57_19785 PF00437 Type II/IV secretion system protein KCU57_19785 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KCU57_19790 PF02091 Glycyl-tRNA synthetase alpha subunit KCU57_19800 PF05746 DALR anticodon binding domain KCU57_19800 PF02092 Glycyl-tRNA synthetase beta subunit KCU57_19805 PF13361 UvrD-like helicase C-terminal domain KCU57_19805 PF00580 UvrD/REP helicase N-terminal domain KCU57_19810 PF00265 Thymidine kinase KCU57_19820 PF04349 Periplasmic glucan biosynthesis protein, MdoG KCU57_19835 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KCU57_19835 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KCU57_19835 PF06827 Zinc finger found in FPG and IleRS KCU57_19850 PF00005 ABC transporter KCU57_19860 PF01926 50S ribosome-binding GTPase KCU57_19860 PF12631 MnmE helical domain KCU57_19860 PF10396 GTP-binding protein TrmE N-terminus KCU57_19865 PF02096 60Kd inner membrane protein KCU57_19865 PF14849 YidC periplasmic domain KCU57_19870 PF00825 Ribonuclease P KCU57_19875 PF00468 Ribosomal protein L34