locus-tag class description KM317_00005 PF00308 Bacterial dnaA protein KM317_00005 PF08299 Bacterial dnaA protein helix-turn-helix KM317_00005 PF11638 DnaA N-terminal domain KM317_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain KM317_00010 PF02767 DNA polymerase III beta subunit, central domain KM317_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain KM317_00015 PF02463 RecF/RecN/SMC N terminal domain KM317_00020 PF00204 DNA gyrase B KM317_00020 PF00986 DNA gyrase B subunit, carboxyl terminus KM317_00020 PF18053 DNA gyrase B subunit insert domain KM317_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM317_00020 PF01751 Toprim domain KM317_00025 PF02517 CPBP intramembrane metalloprotease KM317_00030 PF01435 Peptidase family M48 KM317_00040 PF03544 Gram-negative bacterial TonB protein C-terminal KM317_00045 PF01618 MotA/TolQ/ExbB proton channel family KM317_00050 PF02472 Biopolymer transport protein ExbD/TolR KM317_00055 PF02472 Biopolymer transport protein ExbD/TolR KM317_00060 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ KM317_00070 PF13091 PLD-like domain KM317_00070 PF13396 Phospholipase_D-nuclease N-terminal KM317_00075 PF04055 Radical SAM superfamily KM317_00085 PF01810 LysE type translocator KM317_00090 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain KM317_00095 PF00155 Aminotransferase class I and II KM317_00100 PF07715 TonB-dependent Receptor Plug Domain KM317_00100 PF00593 TonB dependent receptor KM317_00110 PF00158 Sigma-54 interaction domain KM317_00110 PF02954 Bacterial regulatory protein, Fis family KM317_00110 PF01590 GAF domain KM317_00115 PF00171 Aldehyde dehydrogenase family KM317_00120 PF08240 Alcohol dehydrogenase GroES-like domain KM317_00120 PF00107 Zinc-binding dehydrogenase KM317_00140 PF02735 Ku70/Ku80 beta-barrel domain KM317_00145 PF13298 DNA polymerase Ligase (LigD) KM317_00145 PF01068 ATP dependent DNA ligase domain KM317_00145 PF04679 ATP dependent DNA ligase C terminal region KM317_00155 PF01070 FMN-dependent dehydrogenase KM317_00160 PF07729 FCD domain KM317_00160 PF00392 Bacterial regulatory proteins, gntR family KM317_00175 PF12241 Trans-2-enoyl-CoA reductase catalytic region KM317_00175 PF07055 Enoyl reductase FAD binding domain KM317_00175 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase KM317_00180 PF00294 pfkB family carbohydrate kinase KM317_00260 PF02677 Epoxyqueuosine reductase QueH KM317_00285 PF07715 TonB-dependent Receptor Plug Domain KM317_00285 PF00593 TonB dependent receptor KM317_00315 PF00135 Carboxylesterase family KM317_00330 PF03480 Bacterial extracellular solute-binding protein, family 7 KM317_00340 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component KM317_00345 PF04616 Glycosyl hydrolases family 43 KM317_00345 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain KM317_00350 PF00356 Bacterial regulatory proteins, lacI family KM317_00355 PF04962 KduI/IolB family KM317_00375 PF00351 Biopterin-dependent aromatic amino acid hydroxylase KM317_00380 PF01037 Lrp/AsnC ligand binding domain KM317_00395 PF01734 Patatin-like phospholipase KM317_00405 PF01569 PAP2 superfamily KM317_00410 PF01569 PAP2 superfamily KM317_00420 PF03741 Integral membrane protein TerC family KM317_00425 PF10672 S-adenosylmethionine-dependent methyltransferase KM317_00425 PF17785 PUA-like domain KM317_00445 PF04820 Tryptophan halogenase KM317_00460 PF02595 Glycerate kinase family KM317_00465 PF10947 Protein of unknown function (DUF2628) KM317_00470 PF13520 Amino acid permease KM317_00475 PF00072 Response regulator receiver domain KM317_00475 PF00196 Bacterial regulatory proteins, luxR family KM317_00480 PF08447 PAS fold KM317_00480 PF00989 PAS fold KM317_00480 PF00512 His Kinase A (phospho-acceptor) domain KM317_00480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM317_00480 PF13493 Domain of unknown function (DUF4118) KM317_00480 PF13426 PAS domain KM317_00485 PF02308 MgtC family KM317_00500 PF02646 RmuC family KM317_00505 PF00255 Glutathione peroxidase KM317_00515 PF04333 MlaA lipoprotein KM317_00530 PF02470 MlaD protein KM317_00535 PF02405 Permease MlaE KM317_00540 PF00005 ABC transporter KM317_00545 PF17946 RecC C-terminal domain KM317_00550 PF12705 PD-(D/E)XK nuclease superfamily KM317_00550 PF00580 UvrD/REP helicase N-terminal domain KM317_00550 PF13361 UvrD-like helicase C-terminal domain KM317_00555 PF13538 UvrD-like helicase C-terminal domain KM317_00575 PF01230 HIT domain KM317_00580 PF05016 ParE toxin of type II toxin-antitoxin system, parDE KM317_00585 PF09386 Antitoxin ParD KM317_00645 PF00083 Sugar (and other) transporter KM317_00650 PF01227 GTP cyclohydrolase I KM317_00655 PF02463 RecF/RecN/SMC N terminal domain KM317_00685 PF01925 Sulfite exporter TauE/SafE KM317_00690 PF02810 SEC-C motif KM317_00700 PF00990 Diguanylate cyclase, GGDEF domain KM317_00705 PF13406 Transglycosylase SLT domain KM317_00715 PF07690 Major Facilitator Superfamily KM317_00720 PF01126 Heme oxygenase KM317_00725 PF13426 PAS domain KM317_00725 PF08446 PAS fold KM317_00725 PF01590 GAF domain KM317_00725 PF00360 Phytochrome region KM317_00730 PF03594 Benzoate membrane transport protein KM317_00760 PF12849 PBP superfamily domain KM317_00765 PF02142 MGS-like domain KM317_00770 PF00150 Cellulase (glycosyl hydrolase family 5) KM317_00775 PF00150 Cellulase (glycosyl hydrolase family 5) KM317_00780 PF00150 Cellulase (glycosyl hydrolase family 5) KM317_00785 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM317_00785 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KM317_00790 PF01645 Conserved region in glutamate synthase KM317_00790 PF04898 Glutamate synthase central domain KM317_00790 PF00310 Glutamine amidotransferases class-II KM317_00790 PF01493 GXGXG motif KM317_00835 PF00270 DEAD/DEAH box helicase KM317_00835 PF09369 Domain of unknown function (DUF1998) KM317_00835 PF00271 Helicase conserved C-terminal domain KM317_00885 PF00083 Sugar (and other) transporter KM317_00930 PF13614 AAA domain KM317_00945 PF13091 PLD-like domain KM317_00950 PF03061 Thioesterase superfamily KM317_00960 PF12146 Serine aminopeptidase, S33 KM317_00975 PF02673 Bacitracin resistance protein BacA KM317_00980 PF00120 Glutamine synthetase, catalytic domain KM317_00980 PF03951 Glutamine synthetase, beta-Grasp domain KM317_00985 PF00543 Nitrogen regulatory protein P-II KM317_00990 PF00909 Ammonium Transporter Family KM317_00995 PF00989 PAS fold KM317_00995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM317_00995 PF00512 His Kinase A (phospho-acceptor) domain KM317_01000 PF00158 Sigma-54 interaction domain KM317_01000 PF00072 Response regulator receiver domain KM317_01000 PF02954 Bacterial regulatory protein, Fis family KM317_01005 PF00080 Copper/zinc superoxide dismutase (SODC) KM317_01010 PF00080 Copper/zinc superoxide dismutase (SODC) KM317_01020 PF02803 Thiolase, C-terminal domain KM317_01020 PF00108 Thiolase, N-terminal domain KM317_01060 PF02556 Preprotein translocase subunit SecB KM317_01065 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KM317_01065 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KM317_01085 PF13460 NAD(P)H-binding KM317_01090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM317_01090 PF03466 LysR substrate binding domain KM317_01100 PF12833 Helix-turn-helix domain KM317_01115 PF00675 Insulinase (Peptidase family M16) KM317_01115 PF05193 Peptidase M16 inactive domain KM317_01125 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KM317_01125 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KM317_01130 PF02661 Fic/DOC family KM317_01130 PF13784 Fic/DOC family N-terminal KM317_01135 PF01555 DNA methylase KM317_01145 PF00561 alpha/beta hydrolase fold KM317_01155 PF03692 Putative zinc- or iron-chelating domain KM317_01160 PF00501 AMP-binding enzyme KM317_01170 PF00144 Beta-lactamase KM317_01175 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family KM317_01185 PF01820 D-ala D-ala ligase N-terminus KM317_01185 PF07478 D-ala D-ala ligase C-terminus KM317_01195 PF03109 ABC1 family KM317_01205 PF11412 Disulphide bond corrector protein DsbC KM317_01205 PF02683 Cytochrome C biogenesis protein transmembrane region KM317_01210 PF00849 RNA pseudouridylate synthase KM317_01220 PF00472 RF-1 domain KM317_01230 PF01432 Peptidase family M3 KM317_01235 PF10502 Signal peptidase, peptidase S26 KM317_01245 PF12833 Helix-turn-helix domain KM317_01255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM317_01255 PF03466 LysR substrate binding domain KM317_01260 PF01274 Malate synthase KM317_01265 PF00463 Isocitrate lyase family KM317_01270 PF08448 PAS fold KM317_01270 PF00990 Diguanylate cyclase, GGDEF domain KM317_01300 PF01740 STAS domain KM317_01300 PF00916 Sulfate permease family KM317_01330 PF12146 Serine aminopeptidase, S33 KM317_01335 PF00107 Zinc-binding dehydrogenase KM317_01335 PF16884 N-terminal domain of oxidoreductase KM317_01340 PF00248 Aldo/keto reductase family KM317_01350 PF00849 RNA pseudouridylate synthase KM317_01360 PF08482 ATP-dependent helicase C-terminal KM317_01360 PF00271 Helicase conserved C-terminal domain KM317_01360 PF04408 Helicase associated domain (HA2) KM317_01360 PF00270 DEAD/DEAH box helicase KM317_01365 PF01026 TatD related DNase KM317_01380 PF00691 OmpA family KM317_01380 PF04972 BON domain KM317_01410 PF00437 Type II/IV secretion system protein KM317_01415 PF00263 Bacterial type II and III secretion system protein KM317_01415 PF03958 Bacterial type II/III secretion system short domain KM317_01455 PF01061 ABC-2 type transporter KM317_01460 PF00005 ABC transporter KM317_01465 PF00970 Oxidoreductase FAD-binding domain KM317_01465 PF00111 2Fe-2S iron-sulfur cluster binding domain KM317_01465 PF00175 Oxidoreductase NAD-binding domain KM317_01475 PF01381 Helix-turn-helix KM317_01485 PF00005 ABC transporter KM317_01500 PF03350 Uncharacterized protein family, UPF0114 KM317_01505 PF00043 Glutathione S-transferase, C-terminal domain KM317_01505 PF02798 Glutathione S-transferase, N-terminal domain KM317_01510 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region KM317_01510 PF00326 Prolyl oligopeptidase family KM317_01540 PF00490 Delta-aminolevulinic acid dehydratase KM317_01555 PF03466 LysR substrate binding domain KM317_01555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM317_01565 PF00667 FAD binding domain KM317_01565 PF00258 Flavodoxin KM317_01565 PF00175 Oxidoreductase NAD-binding domain KM317_01570 PF07676 WD40-like Beta Propeller Repeat KM317_01570 PF04052 TolB amino-terminal domain KM317_01575 PF08501 Shikimate dehydrogenase substrate binding domain KM317_01575 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KM317_01575 PF01488 Shikimate / quinate 5-dehydrogenase KM317_01585 PF13307 Helicase C-terminal domain KM317_01585 PF06733 DEAD_2 KM317_01600 PF00199 Catalase KM317_01600 PF06628 Catalase-related immune-responsive KM317_01615 PF00326 Prolyl oligopeptidase family KM317_01620 PF04993 TfoX N-terminal domain KM317_01650 PF00202 Aminotransferase class-III KM317_01665 PF01594 AI-2E family transporter KM317_01685 PF07995 Glucose / Sorbosone dehydrogenase KM317_01725 PF13495 Phage integrase, N-terminal SAM-like domain KM317_01725 PF00589 Phage integrase family KM317_01730 PF00920 Dehydratase family KM317_01735 PF06693 Protein of unknown function (DUF1190) KM317_01740 PF03738 Glutathionylspermidine synthase preATP-grasp KM317_01750 PF07726 ATPase family associated with various cellular activities (AAA) KM317_01750 PF17863 AAA lid domain KM317_01785 PF01037 Lrp/AsnC ligand binding domain KM317_01795 PF07690 Major Facilitator Superfamily KM317_01805 PF00132 Bacterial transferase hexapeptide (six repeats) KM317_01820 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KM317_01820 PF00529 HlyD membrane-fusion protein of T1SS KM317_01825 PF00873 AcrB/AcrD/AcrF family KM317_01830 PF02321 Outer membrane efflux protein KM317_01835 PF00563 EAL domain KM317_01835 PF00990 Diguanylate cyclase, GGDEF domain KM317_01835 PF03707 Bacterial signalling protein N terminal repeat KM317_01840 PF13932 GidA associated domain KM317_01840 PF01134 Glucose inhibited division protein A KM317_01850 PF00291 Pyridoxal-phosphate dependent enzyme KM317_01865 PF13649 Methyltransferase domain KM317_01875 PF12697 Alpha/beta hydrolase family KM317_01880 PF00155 Aminotransferase class I and II KM317_01885 PF06968 Biotin and Thiamin Synthesis associated domain KM317_01885 PF04055 Radical SAM superfamily KM317_01895 PF07549 SecD/SecF GG Motif KM317_01895 PF02355 Protein export membrane protein KM317_01900 PF01040 UbiA prenyltransferase family KM317_01910 PF13356 Arm DNA-binding domain KM317_01910 PF00589 Phage integrase family KM317_01965 PF01078 Magnesium chelatase, subunit ChlI KM317_01965 PF13335 Magnesium chelatase, subunit ChlI C-terminal KM317_01970 PF04380 Membrane fusogenic activity KM317_01975 PF00543 Nitrogen regulatory protein P-II KM317_01995 PF17284 Spermidine synthase tetramerisation domain KM317_02000 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KM317_02000 PF17944 Arginine decarboxylase C-terminal helical extension KM317_02000 PF17810 Arginine decarboxylase helical bundle domain KM317_02005 PF00668 Condensation domain KM317_02005 PF00501 AMP-binding enzyme KM317_02005 PF00975 Thioesterase domain KM317_02005 PF13193 AMP-binding enzyme C-terminal domain KM317_02005 PF00550 Phosphopantetheine attachment site KM317_02010 PF03033 Glycosyltransferase family 28 N-terminal domain KM317_02010 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase KM317_02015 PF01757 Acyltransferase family KM317_02020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM317_02020 PF03466 LysR substrate binding domain KM317_02040 PF00106 short chain dehydrogenase KM317_02050 PF03485 Arginyl tRNA synthetase N terminal domain KM317_02050 PF05746 DALR anticodon binding domain KM317_02050 PF00750 tRNA synthetases class I (R) KM317_02055 PF04002 RadC-like JAB domain KM317_02060 PF02441 Flavoprotein KM317_02060 PF04127 DNA / pantothenate metabolism flavoprotein KM317_02065 PF00692 dUTPase KM317_02070 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KM317_02070 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KM317_02070 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KM317_02070 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KM317_02080 PF00156 Phosphoribosyl transferase domain KM317_02090 PF07690 Major Facilitator Superfamily KM317_02100 PF03702 Anhydro-N-acetylmuramic acid kinase KM317_02105 PF04225 Opacity-associated protein A LysM-like domain KM317_02105 PF01551 Peptidase family M23 KM317_02110 PF00579 tRNA synthetases class I (W and Y) KM317_02140 PF00691 OmpA family KM317_02145 PF00107 Zinc-binding dehydrogenase KM317_02145 PF08240 Alcohol dehydrogenase GroES-like domain KM317_02150 PF04389 Peptidase family M28 KM317_02160 PF01551 Peptidase family M23 KM317_02165 PF13180 PDZ domain KM317_02165 PF03572 Peptidase family S41 KM317_02170 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KM317_02170 PF11890 Domain of unknown function (DUF3410) KM317_02170 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KM317_02185 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) KM317_02195 PF01301 Glycosyl hydrolases family 35 KM317_02200 PF13520 Amino acid permease KM317_02205 PF01467 Cytidylyltransferase-like KM317_02205 PF00294 pfkB family carbohydrate kinase KM317_02210 PF02056 Family 4 glycosyl hydrolase KM317_02210 PF11975 Family 4 glycosyl hydrolase C-terminal domain KM317_02215 PF00171 Aldehyde dehydrogenase family KM317_02215 PF01619 Proline dehydrogenase KM317_02215 PF14850 DNA-binding domain of Proline dehydrogenase KM317_02215 PF18327 Proline utilization A proline dehydrogenase N-terminal domain KM317_02225 PF02790 Cytochrome C oxidase subunit II, transmembrane domain KM317_02225 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KM317_02230 PF00115 Cytochrome C and Quinol oxidase polypeptide I KM317_02235 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 KM317_02240 PF00510 Cytochrome c oxidase subunit III KM317_02265 PF01040 UbiA prenyltransferase family KM317_02275 PF13593 SBF-like CPA transporter family (DUF4137) KM317_02280 PF10410 DnaB-helicase binding domain of primase KM317_02280 PF08278 DNA primase DnaG DnaB-binding KM317_02280 PF08275 DNA primase catalytic core, N-terminal domain KM317_02280 PF01807 CHC2 zinc finger KM317_02285 PF03631 Virulence factor BrkB KM317_02295 PF01165 Ribosomal protein S21 KM317_02300 PF00814 Glycoprotease family KM317_02305 PF02152 Dihydroneopterin aldolase KM317_02320 PF14310 Fibronectin type III-like domain KM317_02320 PF01915 Glycosyl hydrolase family 3 C-terminal domain KM317_02320 PF00933 Glycosyl hydrolase family 3 N terminal domain KM317_02325 PF07995 Glucose / Sorbosone dehydrogenase KM317_02345 PF07715 TonB-dependent Receptor Plug Domain KM317_02345 PF07660 Secretin and TonB N terminus short domain KM317_02345 PF00593 TonB dependent receptor KM317_02350 PF13520 Amino acid permease KM317_02360 PF13378 Enolase C-terminal domain-like KM317_02360 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KM317_02370 PF07715 TonB-dependent Receptor Plug Domain KM317_02370 PF00593 TonB dependent receptor KM317_02375 PF01510 N-acetylmuramoyl-L-alanine amidase KM317_02375 PF01471 Putative peptidoglycan binding domain KM317_02405 PF01471 Putative peptidoglycan binding domain KM317_02405 PF04717 Type VI secretion system, phage-baseplate injector KM317_02440 PF07063 Domain of unknown function (DUF1338) KM317_02450 PF00873 AcrB/AcrD/AcrF family KM317_02455 PF00873 AcrB/AcrD/AcrF family KM317_02460 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KM317_02470 PF14489 QueF-like protein KM317_02470 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term KM317_02475 PF04972 BON domain KM317_02475 PF01476 LysM domain KM317_02485 PF09827 CRISPR associated protein Cas2 KM317_02490 PF01867 CRISPR associated protein Cas1 KM317_02510 PF09704 CRISPR-associated protein (Cas_Cas5) KM317_02530 PF03971 Monomeric isocitrate dehydrogenase KM317_02540 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) KM317_02550 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KM317_02550 PF07498 Rho termination factor, N-terminal domain KM317_02550 PF07497 Rho termination factor, RNA-binding domain KM317_02555 PF00085 Thioredoxin KM317_02560 PF00271 Helicase conserved C-terminal domain KM317_02560 PF12300 ATP-dependent RNA helicase RhlB KM317_02560 PF00270 DEAD/DEAH box helicase KM317_02565 PF00005 ABC transporter KM317_02570 PF18075 FtsX extracellular domain KM317_02575 PF01339 CheB methylesterase KM317_02575 PF00072 Response regulator receiver domain KM317_02580 PF03167 Uracil DNA glycosylase superfamily KM317_02585 PF00140 Sigma-70 factor, region 1.2 KM317_02585 PF04542 Sigma-70 region 2 KM317_02585 PF04545 Sigma-70, region 4 KM317_02590 PF03458 UPF0126 domain KM317_02605 PF00271 Helicase conserved C-terminal domain KM317_02605 PF17764 3′ DNA-binding domain (3′BD) KM317_02605 PF00270 DEAD/DEAH box helicase KM317_02605 PF18074 Primosomal protein N C-terminal domain KM317_02605 PF18319 PriA DNA helicase Cys-rich region (CRR) domain KM317_02615 PF01554 MatE KM317_02620 PF01343 Peptidase family S49 KM317_02645 PF01300 Telomere recombination KM317_02650 PF01131 DNA topoisomerase KM317_02650 PF01751 Toprim domain KM317_02650 PF13368 Topoisomerase C-terminal repeat KM317_02655 PF06271 RDD family KM317_02660 PF07963 Prokaryotic N-terminal methylation motif KM317_02660 PF00114 Pilin (bacterial filament) KM317_02670 PF04361 Protein of unknown function (DUF494) KM317_02675 PF02481 DNA recombination-mediator protein A KM317_02675 PF17782 DprA winged helix domain KM317_02680 PF01476 LysM domain KM317_02685 PF01327 Polypeptide deformylase KM317_02690 PF02911 Formyl transferase, C-terminal domain KM317_02690 PF00551 Formyl transferase KM317_02695 PF01189 16S rRNA methyltransferase RsmB/F KM317_02695 PF01029 NusB family KM317_02700 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase KM317_02715 PF00535 Glycosyl transferase family 2 KM317_02735 PF00925 GTP cyclohydrolase II KM317_02750 PF02580 D-Tyr-tRNA(Tyr) deacylase KM317_02755 PF03979 Sigma-70 factor, region 1.1 KM317_02755 PF00140 Sigma-70 factor, region 1.2 KM317_02755 PF04545 Sigma-70, region 4 KM317_02755 PF04546 Sigma-70, non-essential region KM317_02755 PF04542 Sigma-70 region 2 KM317_02755 PF04539 Sigma-70 region 3 KM317_02765 PF07690 Major Facilitator Superfamily KM317_02770 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KM317_02770 PF00356 Bacterial regulatory proteins, lacI family KM317_02785 PF11896 Domain of unknown function (DUF3416) KM317_02785 PF00128 Alpha amylase, catalytic domain KM317_02790 PF00128 Alpha amylase, catalytic domain KM317_02790 PF16657 Maltogenic Amylase, C-terminal domain KM317_02795 PF00128 Alpha amylase, catalytic domain KM317_02795 PF02806 Alpha amylase, C-terminal all-beta domain KM317_02795 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KM317_02805 PF13356 Arm DNA-binding domain KM317_02805 PF00589 Phage integrase family KM317_02810 PF00145 C-5 cytosine-specific DNA methylase KM317_02820 PF03852 DNA mismatch endonuclease Vsr KM317_02840 PF08676 MutL C terminal dimerisation domain KM317_02840 PF01119 DNA mismatch repair protein, C-terminal domain KM317_02845 PF04546 Sigma-70, non-essential region KM317_02845 PF04542 Sigma-70 region 2 KM317_02845 PF04539 Sigma-70 region 3 KM317_02845 PF04545 Sigma-70, region 4 KM317_02845 PF03979 Sigma-70 factor, region 1.1 KM317_02845 PF00140 Sigma-70 factor, region 1.2 KM317_02860 PF00672 HAMP domain KM317_02860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM317_02860 PF00512 His Kinase A (phospho-acceptor) domain KM317_02860 PF01627 Hpt domain KM317_02860 PF00072 Response regulator receiver domain KM317_02860 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KM317_02880 PF00664 ABC transporter transmembrane region KM317_02880 PF00005 ABC transporter KM317_02880 PF03412 Peptidase C39 family KM317_02900 PF00196 Bacterial regulatory proteins, luxR family KM317_02900 PF00072 Response regulator receiver domain KM317_02960 PF04002 RadC-like JAB domain KM317_02965 PF01381 Helix-turn-helix KM317_02970 PF00226 DnaJ domain KM317_02970 PF01556 DnaJ C terminal domain KM317_02970 PF16713 Enriched in aromatic and glycine Residues box KM317_03005 PF16793 RepB DNA-primase from phage plasmid KM317_03005 PF03389 MobA/MobL family KM317_03040 PF18073 Rubredoxin metal binding domain KM317_03065 PF01850 PIN domain KM317_03100 PF12706 Beta-lactamase superfamily domain KM317_03105 PF00440 Bacterial regulatory proteins, tetR family KM317_03105 PF08359 YsiA-like protein, C-terminal region KM317_03110 PF01494 FAD binding domain KM317_03140 PF02203 Tar ligand binding domain homologue KM317_03140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM317_03140 PF00672 HAMP domain KM317_03155 PF05067 Manganese containing catalase KM317_03160 PF05974 Domain of unknown function (DUF892) KM317_03165 PF05974 Domain of unknown function (DUF892) KM317_03175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM317_03175 PF00512 His Kinase A (phospho-acceptor) domain KM317_03185 PF06745 KaiC KM317_03195 PF00440 Bacterial regulatory proteins, tetR family KM317_03200 PF00175 Oxidoreductase NAD-binding domain KM317_03200 PF00111 2Fe-2S iron-sulfur cluster binding domain KM317_03200 PF00970 Oxidoreductase FAD-binding domain KM317_03205 PF00487 Fatty acid desaturase KM317_03215 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM317_03215 PF00205 Thiamine pyrophosphate enzyme, central domain KM317_03215 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM317_03220 PF00512 His Kinase A (phospho-acceptor) domain KM317_03220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM317_03225 PF00158 Sigma-54 interaction domain KM317_03225 PF00072 Response regulator receiver domain KM317_03225 PF02954 Bacterial regulatory protein, Fis family KM317_03240 PF07690 Major Facilitator Superfamily KM317_03245 PF10414 Sirohaem synthase dimerisation region KM317_03245 PF14824 Sirohaem biosynthesis protein central KM317_03245 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KM317_03250 PF00072 Response regulator receiver domain KM317_03250 PF01339 CheB methylesterase KM317_03255 PF00005 ABC transporter KM317_03260 PF07690 Major Facilitator Superfamily KM317_03265 PF04324 BFD-like [2Fe-2S] binding domain KM317_03265 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KM317_03265 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KM317_03265 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM317_03265 PF18267 Rubredoxin NAD+ reductase C-terminal domain KM317_03270 PF00355 Rieske [2Fe-2S] domain KM317_03275 PF04324 BFD-like [2Fe-2S] binding domain KM317_03275 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KM317_03275 PF00384 Molybdopterin oxidoreductase KM317_03275 PF01568 Molydopterin dinucleotide binding domain KM317_03280 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KM317_03285 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KM317_03285 PF00128 Alpha amylase, catalytic domain KM317_03295 PF00128 Alpha amylase, catalytic domain KM317_03300 PF02446 4-alpha-glucanotransferase KM317_03305 PF00128 Alpha amylase, catalytic domain KM317_03305 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KM317_03305 PF11941 Domain of unknown function (DUF3459) KM317_03310 PF00128 Alpha amylase, catalytic domain KM317_03310 PF02806 Alpha amylase, C-terminal all-beta domain KM317_03310 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KM317_03315 PF00534 Glycosyl transferases group 1 KM317_03315 PF08323 Starch synthase catalytic domain KM317_03325 PF02954 Bacterial regulatory protein, Fis family KM317_03325 PF00158 Sigma-54 interaction domain KM317_03325 PF00072 Response regulator receiver domain KM317_03330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM317_03330 PF00072 Response regulator receiver domain KM317_03330 PF13188 PAS domain KM317_03330 PF00512 His Kinase A (phospho-acceptor) domain KM317_03330 PF08448 PAS fold KM317_03335 PF13632 Glycosyl transferase family group 2 KM317_03345 PF04397 LytTr DNA-binding domain KM317_03345 PF00072 Response regulator receiver domain KM317_03350 PF03900 Porphobilinogen deaminase, C-terminal domain KM317_03350 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain KM317_03365 PF01638 HxlR-like helix-turn-helix KM317_03380 PF00326 Prolyl oligopeptidase family KM317_03380 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain KM317_03385 PF00155 Aminotransferase class I and II KM317_03390 PF00326 Prolyl oligopeptidase family KM317_03390 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain KM317_03395 PF04304 Protein of unknown function (DUF454) KM317_03405 PF01678 Diaminopimelate epimerase KM317_03415 PF00589 Phage integrase family KM317_03415 PF02899 Phage integrase, N-terminal SAM-like domain KM317_03420 PF00227 Proteasome subunit KM317_03425 PF07724 AAA domain (Cdc48 subfamily) KM317_03425 PF00004 ATPase family associated with various cellular activities (AAA) KM317_03425 PF10431 C-terminal, D2-small domain, of ClpB protein KM317_03440 PF07715 TonB-dependent Receptor Plug Domain KM317_03440 PF00593 TonB dependent receptor KM317_03450 PF01209 ubiE/COQ5 methyltransferase family KM317_03475 PF11838 ERAP1-like C-terminal domain KM317_03475 PF01433 Peptidase family M1 domain KM317_03480 PF00561 alpha/beta hydrolase fold KM317_03480 PF00364 Biotin-requiring enzyme KM317_03490 PF00403 Heavy-metal-associated domain KM317_03495 PF13360 PQQ-like domain KM317_03500 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM317_03505 PF00034 Cytochrome c KM317_03505 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP KM317_03505 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KM317_03515 PF08240 Alcohol dehydrogenase GroES-like domain KM317_03515 PF00107 Zinc-binding dehydrogenase KM317_03525 PF00158 Sigma-54 interaction domain KM317_03525 PF02954 Bacterial regulatory protein, Fis family KM317_03525 PF01590 GAF domain KM317_03530 PF00294 pfkB family carbohydrate kinase KM317_03540 PF04085 rod shape-determining protein MreC KM317_03550 PF00905 Penicillin binding protein transpeptidase domain KM317_03550 PF03717 Penicillin-binding Protein dimerisation domain KM317_03555 PF01098 Cell cycle protein KM317_03560 PF01083 Cutinase KM317_03565 PF00295 Glycosyl hydrolases family 28 KM317_03570 PF13406 Transglycosylase SLT domain KM317_03575 PF05036 Sporulation related domain KM317_03575 PF03330 Lytic transglycolase KM317_03580 PF00768 D-alanyl-D-alanine carboxypeptidase KM317_03580 PF07943 Penicillin-binding protein 5, C-terminal domain KM317_03605 PF04359 Protein of unknown function (DUF493) KM317_03610 PF03099 Biotin/lipoate A/B protein ligase family KM317_03615 PF04055 Radical SAM superfamily KM317_03615 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family KM317_03620 PF11818 C-terminal domain of tail specific protease (DUF3340) KM317_03620 PF00595 PDZ domain KM317_03620 PF03572 Peptidase family S41 KM317_03620 PF17804 Tail specific protease N-terminal domain KM317_03640 PF01467 Cytidylyltransferase-like KM317_03640 PF00293 NUDIX domain KM317_03670 PF08338 Domain of unknown function (DUF1731) KM317_03670 PF01370 NAD dependent epimerase/dehydratase family KM317_03680 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain KM317_03680 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KM317_03685 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KM317_03685 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KM317_03690 PF04972 BON domain KM317_03700 PF00989 PAS fold KM317_03700 PF00512 His Kinase A (phospho-acceptor) domain KM317_03700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM317_03705 PF00072 Response regulator receiver domain KM317_03710 PF00512 His Kinase A (phospho-acceptor) domain KM317_03710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM317_03720 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KM317_03740 PF03330 Lytic transglycolase KM317_03755 PF02837 Glycosyl hydrolases family 2, sugar binding domain KM317_03755 PF02836 Glycosyl hydrolases family 2, TIM barrel domain KM317_03755 PF00703 Glycosyl hydrolases family 2 KM317_03755 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 KM317_03755 PF16355 Domain of unknown function (DUF4982) KM317_03770 PF00392 Bacterial regulatory proteins, gntR family KM317_03770 PF07702 UTRA domain KM317_03775 PF07690 Major Facilitator Superfamily KM317_03780 PF00356 Bacterial regulatory proteins, lacI family KM317_03785 PF01380 SIS domain KM317_03790 PF01979 Amidohydrolase family KM317_03800 PF12627 Probable RNA and SrmB- binding site of polymerase A KM317_03800 PF01743 Poly A polymerase head domain KM317_03800 PF01966 HD domain KM317_03805 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain KM317_03805 PF01464 Transglycosylase SLT domain KM317_03810 PF00593 TonB dependent receptor KM317_03810 PF07715 TonB-dependent Receptor Plug Domain KM317_03830 PF01323 DSBA-like thioredoxin domain KM317_03835 PF01323 DSBA-like thioredoxin domain KM317_03840 PF00034 Cytochrome c KM317_03845 PF01926 50S ribosome-binding GTPase KM317_03855 PF12833 Helix-turn-helix domain KM317_03865 PF04107 Glutamate-cysteine ligase family 2(GCS2) KM317_03875 PF00672 HAMP domain KM317_03875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM317_03875 PF00512 His Kinase A (phospho-acceptor) domain KM317_03880 PF00486 Transcriptional regulatory protein, C terminal KM317_03880 PF00072 Response regulator receiver domain KM317_03890 PF02583 Metal-sensitive transcriptional repressor KM317_03895 PF08240 Alcohol dehydrogenase GroES-like domain KM317_03895 PF00107 Zinc-binding dehydrogenase KM317_03900 PF04828 Glutathione-dependent formaldehyde-activating enzyme KM317_03905 PF00756 Putative esterase KM317_03910 PF00155 Aminotransferase class I and II KM317_03910 PF00392 Bacterial regulatory proteins, gntR family KM317_03915 PF02567 Phenazine biosynthesis-like protein KM317_03920 PF00892 EamA-like transporter family KM317_03930 PF02645 Uncharacterised protein, DegV family COG1307 KM317_03945 PF01979 Amidohydrolase family KM317_03970 PF00462 Glutaredoxin KM317_03975 PF01522 Polysaccharide deacetylase KM317_03995 PF00155 Aminotransferase class I and II KM317_04000 PF00664 ABC transporter transmembrane region KM317_04000 PF00005 ABC transporter KM317_04000 PF03412 Peptidase C39 family KM317_04030 PF03193 RsgA GTPase KM317_04045 PF00128 Alpha amylase, catalytic domain KM317_04060 PF00356 Bacterial regulatory proteins, lacI family KM317_04065 PF00106 short chain dehydrogenase KM317_04070 PF03600 Citrate transporter KM317_04080 PF00072 Response regulator receiver domain KM317_04080 PF00486 Transcriptional regulatory protein, C terminal KM317_04085 PF08521 Two-component sensor kinase N-terminal KM317_04085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM317_04085 PF00512 His Kinase A (phospho-acceptor) domain KM317_04095 PF00196 Bacterial regulatory proteins, luxR family KM317_04095 PF00072 Response regulator receiver domain KM317_04110 PF00512 His Kinase A (phospho-acceptor) domain KM317_04110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM317_04120 PF00375 Sodium:dicarboxylate symporter family KM317_04125 PF01515 Phosphate acetyl/butaryl transferase KM317_04125 PF03949 Malic enzyme, NAD binding domain KM317_04125 PF00390 Malic enzyme, N-terminal domain KM317_04150 PF03279 Bacterial lipid A biosynthesis acyltransferase KM317_04155 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) KM317_04160 PF02321 Outer membrane efflux protein KM317_04175 PF00990 Diguanylate cyclase, GGDEF domain KM317_04180 PF00180 Isocitrate/isopropylmalate dehydrogenase KM317_04185 PF00694 Aconitase C-terminal domain KM317_04195 PF00330 Aconitase family (aconitate hydratase) KM317_04205 PF00682 HMGL-like KM317_04205 PF08502 LeuA allosteric (dimerisation) domain KM317_04210 PF00291 Pyridoxal-phosphate dependent enzyme KM317_04220 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM317_04220 PF00205 Thiamine pyrophosphate enzyme, central domain KM317_04220 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM317_04225 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KM317_04225 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KM317_04230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM317_04230 PF00672 HAMP domain KM317_04235 PF01964 Radical SAM ThiC family KM317_04235 PF13667 ThiC-associated domain KM317_04255 PF00719 Inorganic pyrophosphatase KM317_04265 PF03030 Inorganic H+ pyrophosphatase KM317_04285 PF00365 Phosphofructokinase KM317_04295 PF01225 Mur ligase family, catalytic domain KM317_04295 PF02875 Mur ligase family, glutamate ligase domain KM317_04295 PF08245 Mur ligase middle domain KM317_04320 PF01569 PAP2 superfamily KM317_04335 PF00480 ROK family KM317_04345 PF00202 Aminotransferase class-III KM317_04490 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding KM317_04490 PF12170 DNA polymerase III tau subunit V interacting with alpha KM317_04490 PF12169 DNA polymerase III subunits gamma and tau domain III KM317_04495 PF02575 YbaB/EbfC DNA-binding family KM317_04500 PF13662 Toprim domain KM317_04500 PF02132 RecR protein KM317_04505 PF01230 HIT domain KM317_04515 PF01841 Transglutaminase-like superfamily KM317_04515 PF13559 Domain of unknown function (DUF4129) KM317_04515 PF11992 Domain of unknown function (DUF3488) KM317_04525 PF17863 AAA lid domain KM317_04525 PF07726 ATPase family associated with various cellular activities (AAA) KM317_04545 PF02545 Maf-like protein KM317_04550 PF02620 Large ribosomal RNA subunit accumulation protein YceD KM317_04555 PF01783 Ribosomal L32p protein family KM317_04560 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KM317_04560 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KM317_04565 PF00698 Acyl transferase domain KM317_04575 PF00550 Phosphopantetheine attachment site KM317_04580 PF00109 Beta-ketoacyl synthase, N-terminal domain KM317_04580 PF02801 Beta-ketoacyl synthase, C-terminal domain KM317_04585 PF00425 chorismate binding enzyme KM317_04585 PF04715 Anthranilate synthase component I, N terminal region KM317_04590 PF02618 YceG-like family KM317_04595 PF02223 Thymidylate kinase KM317_04600 PF09115 DNA polymerase III, delta subunit, C terminal KM317_04630 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system KM317_04635 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system KM317_04650 PF01593 Flavin containing amine oxidoreductase KM317_04655 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KM317_04655 PF00034 Cytochrome c KM317_04665 PF00127 Copper binding proteins, plastocyanin/azurin family KM317_04670 PF13191 AAA ATPase domain KM317_04670 PF00069 Protein kinase domain KM317_04675 PF00202 Aminotransferase class-III KM317_04685 PF02581 Thiamine monophosphate synthase KM317_04690 PF00301 Rubredoxin KM317_04695 PF13369 Transglutaminase-like superfamily KM317_04705 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) KM317_04715 PF01812 5-formyltetrahydrofolate cyclo-ligase family KM317_04725 PF05164 Cell division protein ZapA KM317_04735 PF03707 Bacterial signalling protein N terminal repeat KM317_04735 PF00990 Diguanylate cyclase, GGDEF domain KM317_04735 PF00563 EAL domain KM317_04740 PF00563 EAL domain KM317_04740 PF13188 PAS domain KM317_04740 PF03707 Bacterial signalling protein N terminal repeat KM317_04740 PF00990 Diguanylate cyclase, GGDEF domain KM317_04745 PF03695 Uncharacterised protein family (UPF0149) KM317_04750 PF05195 Aminopeptidase P, N-terminal domain KM317_04750 PF00557 Metallopeptidase family M24 KM317_04755 PF00557 Metallopeptidase family M24 KM317_04770 PF06969 HemN C-terminal domain KM317_04770 PF04055 Radical SAM superfamily KM317_04775 PF01725 Ham1 family KM317_04780 PF01138 3' exoribonuclease family, domain 1 KM317_04780 PF03725 3' exoribonuclease family, domain 2 KM317_04785 PF08340 Domain of unknown function (DUF1732) KM317_04785 PF03755 YicC-like family, N-terminal region KM317_04790 PF00625 Guanylate kinase KM317_04795 PF01192 RNA polymerase Rpb6 KM317_04800 PF04607 Region found in RelA / SpoT proteins KM317_04800 PF02824 TGS domain KM317_04800 PF13291 ACT domain KM317_04815 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KM317_04815 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KM317_04835 PF07733 Bacterial DNA polymerase III alpha NTPase domain KM317_04835 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KM317_04835 PF14579 Helix-hairpin-helix motif KM317_04835 PF02811 PHP domain KM317_04835 PF01336 OB-fold nucleic acid binding domain KM317_04850 PF01726 LexA DNA binding domain KM317_04850 PF00717 Peptidase S24-like KM317_04855 PF00285 Citrate synthase, C-terminal domain KM317_04870 PF00285 Citrate synthase, C-terminal domain KM317_04875 PF00694 Aconitase C-terminal domain KM317_04875 PF00330 Aconitase family (aconitate hydratase) KM317_04885 PF04303 PrpF protein KM317_04890 PF07715 TonB-dependent Receptor Plug Domain KM317_04890 PF00593 TonB dependent receptor KM317_04905 PF00207 Alpha-2-macroglobulin family KM317_04905 PF07703 Alpha-2-macroglobulin bait region domain KM317_04905 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain KM317_04905 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain KM317_04905 PF11974 Bacterial alpha-2-macroglobulin MG3 domain KM317_04905 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain KM317_04905 PF17962 Bacterial macroglobulin domain 6 KM317_04905 PF01835 MG2 domain KM317_04920 PF00905 Penicillin binding protein transpeptidase domain KM317_04920 PF00912 Transglycosylase KM317_04920 PF06832 Penicillin-Binding Protein C-terminus Family KM317_04930 PF08534 Redoxin KM317_04940 PF00226 DnaJ domain KM317_04940 PF01556 DnaJ C terminal domain KM317_04945 PF00072 Response regulator receiver domain KM317_04950 PF08240 Alcohol dehydrogenase GroES-like domain KM317_04950 PF00107 Zinc-binding dehydrogenase KM317_04955 PF01145 SPFH domain / Band 7 family KM317_04955 PF12221 Bacterial membrane protein N terminal KM317_04960 PF01145 SPFH domain / Band 7 family KM317_04970 PF00709 Adenylosuccinate synthetase KM317_05000 PF01433 Peptidase family M1 domain KM317_05030 PF12161 HsdM N-terminal domain KM317_05030 PF02384 N-6 DNA Methylase KM317_05040 PF17761 DUF1016 N-terminal domain KM317_05040 PF06250 YhcG PDDEXK nuclease domain KM317_05045 PF11867 Domain of unknown function (DUF3387) KM317_05045 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) KM317_05045 PF18766 SWI2/SNF2 ATPase KM317_05065 PF04397 LytTr DNA-binding domain KM317_05065 PF00072 Response regulator receiver domain KM317_05070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM317_05070 PF06580 Histidine kinase KM317_05070 PF07694 5TMR of 5TMR-LYT KM317_05100 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM317_05110 PF17755 UvrA DNA-binding domain KM317_05120 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain KM317_05120 PF06165 Glycosyltransferase family 36 KM317_05120 PF10091 Putative glucoamylase KM317_05130 PF08240 Alcohol dehydrogenase GroES-like domain KM317_05130 PF13823 Alcohol dehydrogenase GroES-associated KM317_05130 PF00107 Zinc-binding dehydrogenase KM317_05140 PF02585 GlcNAc-PI de-N-acetylase KM317_05155 PF06628 Catalase-related immune-responsive KM317_05155 PF00199 Catalase KM317_05155 PF18011 C-terminal domain found in long catalases KM317_05160 PF01590 GAF domain KM317_05160 PF00990 Diguanylate cyclase, GGDEF domain KM317_05160 PF00360 Phytochrome region KM317_05160 PF00563 EAL domain KM317_05170 PF02347 Glycine cleavage system P-protein KM317_05190 PF03412 Peptidase C39 family KM317_05190 PF00664 ABC transporter transmembrane region KM317_05190 PF00005 ABC transporter KM317_05195 PF07690 Major Facilitator Superfamily KM317_05230 PF08019 Phosphoethanolamine transferase EptA/EptB KM317_05230 PF00884 Sulfatase KM317_05240 PF00486 Transcriptional regulatory protein, C terminal KM317_05240 PF00072 Response regulator receiver domain KM317_05245 PF02702 Osmosensitive K+ channel His kinase sensor domain KM317_05245 PF13493 Domain of unknown function (DUF4118) KM317_05245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM317_05245 PF00512 His Kinase A (phospho-acceptor) domain KM317_05255 PF03776 Septum formation topological specificity factor MinE KM317_05260 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KM317_05265 PF05209 Septum formation inhibitor MinC, N-terminal domain KM317_05265 PF03775 Septum formation inhibitor MinC, C-terminal domain KM317_05275 PF07730 Histidine kinase KM317_05280 PF00072 Response regulator receiver domain KM317_05280 PF00196 Bacterial regulatory proteins, luxR family KM317_05295 PF00730 HhH-GPD superfamily base excision DNA repair protein KM317_05305 PF00535 Glycosyl transferase family 2 KM317_05310 PF00912 Transglycosylase KM317_05310 PF00905 Penicillin binding protein transpeptidase domain KM317_05310 PF14814 Bifunctional transglycosylase second domain KM317_05320 PF04851 Type III restriction enzyme, res subunit KM317_05320 PF13307 Helicase C-terminal domain KM317_05325 PF00814 Glycoprotease family KM317_05330 PF00593 TonB dependent receptor KM317_05340 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain KM317_05340 PF02951 Prokaryotic glutathione synthetase, N-terminal domain KM317_05345 PF00072 Response regulator receiver domain KM317_05350 PF00072 Response regulator receiver domain KM317_05355 PF01584 CheW-like domain KM317_05360 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term KM317_05360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM317_05365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM317_05365 PF00072 Response regulator receiver domain KM317_05365 PF01627 Hpt domain KM317_05365 PF01584 CheW-like domain KM317_05365 PF02895 Signal transducing histidine kinase, homodimeric domain KM317_05370 PF01339 CheB methylesterase KM317_05370 PF00072 Response regulator receiver domain KM317_05390 PF01112 Asparaginase KM317_05395 PF03932 CutC family KM317_05415 PF01804 Penicillin amidase KM317_05475 PF15457 Type III T3SS secreted effector HopW1-1/HopPmaA KM317_05480 PF01301 Glycosyl hydrolases family 35 KM317_05485 PF07971 Glycosyl hydrolase family 92 KM317_05485 PF17678 Glycosyl hydrolase family 92 N-terminal domain KM317_05495 PF07691 PA14 domain KM317_05495 PF14310 Fibronectin type III-like domain KM317_05495 PF00933 Glycosyl hydrolase family 3 N terminal domain KM317_05495 PF01915 Glycosyl hydrolase family 3 C-terminal domain KM317_05505 PF00728 Glycosyl hydrolase family 20, catalytic domain KM317_05505 PF02838 Glycosyl hydrolase family 20, domain 2 KM317_05505 PF07691 PA14 domain KM317_05510 PF01476 LysM domain KM317_05510 PF00704 Glycosyl hydrolases family 18 KM317_05525 PF02685 Glucokinase KM317_05535 PF04452 RNA methyltransferase KM317_05540 PF00202 Aminotransferase class-III KM317_05545 PF00293 NUDIX domain KM317_05550 PF00459 Inositol monophosphatase family KM317_05555 PF03819 MazG nucleotide pyrophosphohydrolase domain KM317_05560 PF02694 Uncharacterised BCR, YnfA/UPF0060 family KM317_05565 PF01145 SPFH domain / Band 7 family KM317_05565 PF16200 C-terminal region of band_7 KM317_05575 PF01571 Aminomethyltransferase folate-binding domain KM317_05575 PF08669 Glycine cleavage T-protein C-terminal barrel domain KM317_05580 PF01597 Glycine cleavage H-protein KM317_05600 PF00892 EamA-like transporter family KM317_05605 PF05199 GMC oxidoreductase KM317_05605 PF00732 GMC oxidoreductase KM317_05625 PF00067 Cytochrome P450 KM317_05630 PF00067 Cytochrome P450 KM317_05635 PF00067 Cytochrome P450 KM317_05650 PF00067 Cytochrome P450 KM317_05655 PF00348 Polyprenyl synthetase KM317_05670 PF01070 FMN-dependent dehydrogenase KM317_05675 PF02770 Acyl-CoA dehydrogenase, middle domain KM317_05675 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM317_05675 PF09317 Domain of unknown function (DUF1974) KM317_05675 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM317_05685 PF00440 Bacterial regulatory proteins, tetR family KM317_05705 PF01430 Hsp33 protein KM317_05710 PF00912 Transglycosylase KM317_05715 PF00535 Glycosyl transferase family 2 KM317_05720 PF00571 CBS domain KM317_05725 PF05170 AsmA family KM317_05730 PF03006 Haemolysin-III related KM317_05735 PF00009 Elongation factor Tu GTP binding domain KM317_05735 PF16658 Class II release factor RF3, C-terminal domain KM317_05740 PF04225 Opacity-associated protein A LysM-like domain KM317_05740 PF01551 Peptidase family M23 KM317_05745 PF00561 alpha/beta hydrolase fold KM317_05750 PF01053 Cys/Met metabolism PLP-dependent enzyme KM317_05755 PF03447 Homoserine dehydrogenase, NAD binding domain KM317_05755 PF00742 Homoserine dehydrogenase KM317_05755 PF00696 Amino acid kinase family KM317_05760 PF00364 Biotin-requiring enzyme KM317_05760 PF00561 alpha/beta hydrolase fold KM317_05765 PF00990 Diguanylate cyclase, GGDEF domain KM317_05770 PF03313 Serine dehydratase alpha chain KM317_05770 PF03315 Serine dehydratase beta chain KM317_05785 PF01292 Prokaryotic cytochrome b561 KM317_05795 PF17149 Periplasmic sensor domain found in signal transduction proteins KM317_05795 PF00672 HAMP domain KM317_05795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM317_05795 PF00512 His Kinase A (phospho-acceptor) domain KM317_05795 PF01627 Hpt domain KM317_05795 PF00072 Response regulator receiver domain KM317_05800 PF17149 Periplasmic sensor domain found in signal transduction proteins KM317_05800 PF00672 HAMP domain KM317_05800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM317_05800 PF01627 Hpt domain KM317_05800 PF00072 Response regulator receiver domain KM317_05800 PF00512 His Kinase A (phospho-acceptor) domain KM317_05805 PF07690 Major Facilitator Superfamily KM317_05810 PF01208 Uroporphyrinogen decarboxylase (URO-D) KM317_05820 PF13533 Biotin-lipoyl like KM317_05825 PF00873 AcrB/AcrD/AcrF family KM317_05830 PF02321 Outer membrane efflux protein KM317_05835 PF01761 3-dehydroquinate synthase KM317_05840 PF01202 Shikimate kinase KM317_05845 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region KM317_05845 PF01243 Pyridoxamine 5'-phosphate oxidase KM317_05850 PF00583 Acetyltransferase (GNAT) family KM317_05860 PF07690 Major Facilitator Superfamily KM317_05865 PF09278 MerR, DNA binding KM317_05865 PF00376 MerR family regulatory protein KM317_05875 PF03807 NADP oxidoreductase coenzyme F420-dependent KM317_05875 PF14748 Pyrroline-5-carboxylate reductase dimerisation KM317_05885 PF01168 Alanine racemase, N-terminal domain KM317_05890 PF00437 Type II/IV secretion system protein KM317_05895 PF00437 Type II/IV secretion system protein KM317_05900 PF03352 Methyladenine glycosylase KM317_05900 PF00117 Glutamine amidotransferase class-I KM317_05900 PF00958 GMP synthase C terminal domain KM317_05900 PF13302 Acetyltransferase (GNAT) domain KM317_05900 PF13673 Acetyltransferase (GNAT) domain KM317_05910 PF02622 Uncharacterized ACR, COG1678 KM317_05915 PF03652 Holliday junction resolvase KM317_05920 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KM317_05920 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KM317_05935 PF00544 Pectate lyase KM317_05940 PF02203 Tar ligand binding domain homologue KM317_05940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM317_05940 PF00672 HAMP domain KM317_05950 PF00324 Amino acid permease KM317_05955 PF03600 Citrate transporter KM317_05975 PF00571 CBS domain KM317_05975 PF01769 Divalent cation transporter KM317_05975 PF03448 MgtE intracellular N domain KM317_05980 PF05524 PEP-utilising enzyme, N-terminal KM317_05980 PF00391 PEP-utilising enzyme, mobile domain KM317_05980 PF02896 PEP-utilising enzyme, TIM barrel domain KM317_05985 PF00381 PTS HPr component phosphorylation site KM317_05995 PF03668 P-loop ATPase protein family KM317_06000 PF07475 HPr Serine kinase C-terminal domain KM317_06000 PF02603 HPr Serine kinase N terminus KM317_06005 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KM317_06010 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KM317_06015 PF00309 Sigma-54 factor, Activator interacting domain (AID) KM317_06015 PF04963 Sigma-54 factor, core binding domain KM317_06015 PF04552 Sigma-54, DNA binding domain KM317_06020 PF00005 ABC transporter KM317_06040 PF01380 SIS domain KM317_06040 PF00571 CBS domain KM317_06050 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KM317_06080 PF00551 Formyl transferase KM317_06095 PF00586 AIR synthase related protein, N-terminal domain KM317_06095 PF02769 AIR synthase related protein, C-terminal domain KM317_06105 PF01594 AI-2E family transporter KM317_06110 PF00308 Bacterial dnaA protein KM317_06115 PF00483 Nucleotidyl transferase KM317_06120 PF01636 Phosphotransferase enzyme family KM317_06145 PF00072 Response regulator receiver domain KM317_06145 PF00486 Transcriptional regulatory protein, C terminal KM317_06155 PF00258 Flavodoxin KM317_06155 PF00175 Oxidoreductase NAD-binding domain KM317_06155 PF00667 FAD binding domain KM317_06160 PF02424 ApbE family KM317_06180 PF13640 2OG-Fe(II) oxygenase superfamily KM317_06180 PF18331 PKHD-type hydroxylase C-terminal domain KM317_06185 PF07715 TonB-dependent Receptor Plug Domain KM317_06185 PF00593 TonB dependent receptor KM317_06190 PF00355 Rieske [2Fe-2S] domain KM317_06200 PF00266 Aminotransferase class-V KM317_06205 PF01458 Uncharacterized protein family (UPF0051) KM317_06210 PF00005 ABC transporter KM317_06215 PF01458 Uncharacterized protein family (UPF0051) KM317_06230 PF01965 DJ-1/PfpI family KM317_06245 PF01476 LysM domain KM317_06245 PF08525 Opacity-associated protein A N-terminal motif KM317_06245 PF01551 Peptidase family M23 KM317_06260 PF02566 OsmC-like protein KM317_06270 PF02567 Phenazine biosynthesis-like protein KM317_06275 PF01842 ACT domain KM317_06275 PF00696 Amino acid kinase family KM317_06290 PF08245 Mur ligase middle domain KM317_06290 PF02875 Mur ligase family, glutamate ligase domain KM317_06300 PF00348 Polyprenyl synthetase KM317_06305 PF00436 Single-strand binding protein family KM317_06310 PF13657 HipA N-terminal domain KM317_06310 PF07804 HipA-like C-terminal domain KM317_06325 PF00854 POT family KM317_06330 PF03169 OPT oligopeptide transporter protein KM317_06335 PF07676 WD40-like Beta Propeller Repeat KM317_06335 PF00326 Prolyl oligopeptidase family KM317_06335 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region KM317_06355 PF13419 Haloacid dehalogenase-like hydrolase KM317_06360 PF04328 Selenoprotein, putative KM317_06365 PF02554 Carbon starvation protein CstA KM317_06365 PF13722 5TM C-terminal transporter carbon starvation CstA KM317_06390 PF04493 Endonuclease V KM317_06395 PF00300 Histidine phosphatase superfamily (branch 1) KM317_06405 PF07944 Beta-L-arabinofuranosidase, GH127 KM317_06415 PF02311 AraC-like ligand binding domain KM317_06415 PF12833 Helix-turn-helix domain KM317_06425 PF01339 CheB methylesterase KM317_06425 PF00072 Response regulator receiver domain KM317_06430 PF01739 CheR methyltransferase, SAM binding domain KM317_06430 PF03705 CheR methyltransferase, all-alpha domain KM317_06435 PF00360 Phytochrome region KM317_06435 PF00563 EAL domain KM317_06435 PF00990 Diguanylate cyclase, GGDEF domain KM317_06435 PF01590 GAF domain KM317_06440 PF01584 CheW-like domain KM317_06445 PF12729 Four helix bundle sensory module for signal transduction KM317_06445 PF00672 HAMP domain KM317_06445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM317_06450 PF02203 Tar ligand binding domain homologue KM317_06450 PF00672 HAMP domain KM317_06450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM317_06455 PF02203 Tar ligand binding domain homologue KM317_06455 PF00672 HAMP domain KM317_06455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM317_06460 PF01584 CheW-like domain KM317_06460 PF02895 Signal transducing histidine kinase, homodimeric domain KM317_06460 PF01627 Hpt domain KM317_06460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM317_06470 PF02559 CarD-like/TRCF domain KM317_06470 PF00270 DEAD/DEAH box helicase KM317_06470 PF00271 Helicase conserved C-terminal domain KM317_06470 PF03461 TRCF domain KM317_06470 PF17757 UvrB interaction domain KM317_06490 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ KM317_06510 PF06123 Inner membrane protein CreD KM317_06530 PF00749 tRNA synthetases class I (E and Q), catalytic domain KM317_06535 PF01475 Ferric uptake regulator family KM317_06540 PF07690 Major Facilitator Superfamily KM317_06545 PF00248 Aldo/keto reductase family KM317_06550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM317_06550 PF03466 LysR substrate binding domain KM317_06565 PF01483 Proprotein convertase P-domain KM317_06565 PF00082 Subtilase family KM317_06585 PF00593 TonB dependent receptor KM317_06585 PF07715 TonB-dependent Receptor Plug Domain KM317_06600 PF08240 Alcohol dehydrogenase GroES-like domain KM317_06600 PF00107 Zinc-binding dehydrogenase KM317_06605 PF00654 Voltage gated chloride channel KM317_06615 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KM317_06615 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KM317_06620 PF06029 AlkA N-terminal domain KM317_06620 PF00730 HhH-GPD superfamily base excision DNA repair protein KM317_06620 PF02805 Metal binding domain of Ada KM317_06620 PF12833 Helix-turn-helix domain KM317_06645 PF01494 FAD binding domain KM317_06665 PF00271 Helicase conserved C-terminal domain KM317_06665 PF03880 DbpA RNA binding domain KM317_06665 PF00270 DEAD/DEAH box helicase KM317_06670 PF00849 RNA pseudouridylate synthase KM317_06670 PF01479 S4 domain KM317_06675 PF00990 Diguanylate cyclase, GGDEF domain KM317_06695 PF03737 Aldolase/RraA KM317_06700 PF00144 Beta-lactamase KM317_06715 PF01965 DJ-1/PfpI family KM317_06720 PF00664 ABC transporter transmembrane region KM317_06720 PF00005 ABC transporter KM317_06740 PF03466 LysR substrate binding domain KM317_06740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM317_06785 PF03653 Uncharacterised protein family (UPF0093) KM317_06795 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit KM317_06800 PF01336 OB-fold nucleic acid binding domain KM317_06800 PF07733 Bacterial DNA polymerase III alpha NTPase domain KM317_06800 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KM317_06800 PF14579 Helix-hairpin-helix motif KM317_06800 PF02811 PHP domain KM317_06805 PF01351 Ribonuclease HII KM317_06810 PF02684 Lipid-A-disaccharide synthetase KM317_06815 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 KM317_06815 PF00132 Bacterial transferase hexapeptide (six repeats) KM317_06820 PF07977 FabA-like domain KM317_06825 PF00132 Bacterial transferase hexapeptide (six repeats) KM317_06825 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD KM317_06830 PF01103 Surface antigen KM317_06830 PF07244 Surface antigen variable number repeat KM317_06835 PF17820 PDZ domain KM317_06835 PF02163 Peptidase family M50 KM317_06840 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KM317_06840 PF13288 DXP reductoisomerase C-terminal domain KM317_06840 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KM317_06850 PF01255 Putative undecaprenyl diphosphate synthase KM317_06855 PF01765 Ribosome recycling factor KM317_06860 PF00696 Amino acid kinase family KM317_06865 PF00990 Diguanylate cyclase, GGDEF domain KM317_06870 PF00889 Elongation factor TS KM317_06875 PF00318 Ribosomal protein S2 KM317_06910 PF00557 Metallopeptidase family M24 KM317_06915 PF01966 HD domain KM317_06915 PF01909 Nucleotidyltransferase domain KM317_06915 PF08335 GlnD PII-uridylyltransferase KM317_06920 PF14602 Hexapeptide repeat of succinyl-transferase KM317_06920 PF00132 Bacterial transferase hexapeptide (six repeats) KM317_06920 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal KM317_06925 PF03960 ArsC family KM317_06930 PF07687 Peptidase dimerisation domain KM317_06930 PF01546 Peptidase family M20/M25/M40 KM317_06940 PF00733 Asparagine synthase KM317_06940 PF13537 Glutamine amidotransferase domain KM317_06950 PF01804 Penicillin amidase KM317_06955 PF01804 Penicillin amidase KM317_06960 PF00210 Ferritin-like domain KM317_06965 PF03989 DNA gyrase C-terminal domain, beta-propeller KM317_06965 PF00521 DNA gyrase/topoisomerase IV, subunit A KM317_06980 PF02321 Outer membrane efflux protein KM317_06985 PF00529 HlyD membrane-fusion protein of T1SS KM317_06985 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KM317_06990 PF07690 Major Facilitator Superfamily KM317_07015 PF06903 VirK protein KM317_07025 PF08206 Ribonuclease B OB domain KM317_07025 PF00575 S1 RNA binding domain KM317_07025 PF17876 Cold shock domain KM317_07025 PF08461 Ribonuclease R winged-helix domain KM317_07025 PF00773 RNB domain KM317_07035 PF08032 RNA 2'-O ribose methyltransferase substrate binding KM317_07035 PF00588 SpoU rRNA Methylase family KM317_07040 PF00072 Response regulator receiver domain KM317_07040 PF00990 Diguanylate cyclase, GGDEF domain KM317_07060 PF00929 Exonuclease KM317_07070 PF05114 Protein of unknown function (DUF692) KM317_07080 PF01895 PhoU domain KM317_07085 PF00005 ABC transporter KM317_07090 PF00528 Binding-protein-dependent transport system inner membrane component KM317_07095 PF00528 Binding-protein-dependent transport system inner membrane component KM317_07100 PF12849 PBP superfamily domain KM317_07105 PF12849 PBP superfamily domain KM317_07110 PF07396 Phosphate-selective porin O and P KM317_07120 PF00484 Carbonic anhydrase KM317_07125 PF01740 STAS domain KM317_07125 PF00916 Sulfate permease family KM317_07130 PF00730 HhH-GPD superfamily base excision DNA repair protein KM317_07130 PF10576 Iron-sulfur binding domain of endonuclease III KM317_07130 PF00633 Helix-hairpin-helix motif KM317_07140 PF00378 Enoyl-CoA hydratase/isomerase KM317_07145 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KM317_07145 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KM317_07150 PF00293 NUDIX domain KM317_07155 PF00581 Rhodanese-like domain KM317_07190 PF10672 S-adenosylmethionine-dependent methyltransferase KM317_07190 PF02926 THUMP domain KM317_07190 PF01170 Putative RNA methylase family UPF0020 KM317_07195 PF00072 Response regulator receiver domain KM317_07200 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KM317_07200 PF00072 Response regulator receiver domain KM317_07200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM317_07200 PF00512 His Kinase A (phospho-acceptor) domain KM317_07200 PF00672 HAMP domain KM317_07200 PF01627 Hpt domain KM317_07205 PF04286 Protein of unknown function (DUF445) KM317_07220 PF00171 Aldehyde dehydrogenase family KM317_07225 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KM317_07225 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KM317_07230 PF00202 Aminotransferase class-III KM317_07235 PF07883 Cupin domain KM317_07235 PF01381 Helix-turn-helix KM317_07240 PF00171 Aldehyde dehydrogenase family KM317_07255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM317_07255 PF03459 TOBE domain KM317_07260 PF07690 Major Facilitator Superfamily KM317_07265 PF02634 FdhD/NarQ family KM317_07270 PF00384 Molybdopterin oxidoreductase KM317_07285 PF00818 Ice nucleation protein repeat KM317_07290 PF07690 Major Facilitator Superfamily KM317_07290 PF00083 Sugar (and other) transporter KM317_07295 PF08448 PAS fold KM317_07295 PF00990 Diguanylate cyclase, GGDEF domain KM317_07300 PF01266 FAD dependent oxidoreductase KM317_07305 PF00120 Glutamine synthetase, catalytic domain KM317_07310 PF07722 Peptidase C26 KM317_07315 PF00120 Glutamine synthetase, catalytic domain KM317_07320 PF00202 Aminotransferase class-III KM317_07325 PF13416 Bacterial extracellular solute-binding protein KM317_07330 PF13416 Bacterial extracellular solute-binding protein KM317_07335 PF13533 Biotin-lipoyl like KM317_07340 PF07690 Major Facilitator Superfamily KM317_07345 PF02321 Outer membrane efflux protein KM317_07350 PF00005 ABC transporter KM317_07350 PF08402 TOBE domain KM317_07355 PF00528 Binding-protein-dependent transport system inner membrane component KM317_07360 PF00528 Binding-protein-dependent transport system inner membrane component KM317_07365 PF00171 Aldehyde dehydrogenase family KM317_07380 PF00571 CBS domain KM317_07380 PF03471 Transporter associated domain KM317_07390 PF02130 Uncharacterized protein family UPF0054 KM317_07395 PF02562 PhoH-like protein KM317_07400 PF04055 Radical SAM superfamily KM317_07400 PF00919 Uncharacterized protein family UPF0004 KM317_07400 PF01938 TRAM domain KM317_07405 PF00043 Glutathione S-transferase, C-terminal domain KM317_07405 PF02798 Glutathione S-transferase, N-terminal domain KM317_07410 PF01464 Transglycosylase SLT domain KM317_07415 PF00355 Rieske [2Fe-2S] domain KM317_07415 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal KM317_07420 PF00032 Cytochrome b(C-terminal)/b6/petD KM317_07420 PF00033 Cytochrome b/b6/petB KM317_07430 PF02167 Cytochrome C1 family KM317_07435 PF00043 Glutathione S-transferase, C-terminal domain KM317_07435 PF02798 Glutathione S-transferase, N-terminal domain KM317_07440 PF04386 Stringent starvation protein B KM317_07455 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain KM317_07455 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain KM317_07465 PF00731 AIR carboxylase KM317_07470 PF02222 ATP-grasp domain KM317_07470 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain KM317_07475 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KM317_07475 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KM317_07480 PF00462 Glutaredoxin KM317_07485 PF00106 short chain dehydrogenase KM317_07490 PF01914 MarC family integral membrane protein KM317_07495 PF00593 TonB dependent receptor KM317_07500 PF11892 Domain of unknown function (DUF3412) KM317_07500 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases KM317_07500 PF03641 Possible lysine decarboxylase KM317_07505 PF06580 Histidine kinase KM317_07505 PF07694 5TMR of 5TMR-LYT KM317_07510 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor KM317_07510 PF07963 Prokaryotic N-terminal methylation motif KM317_07530 PF05567 Neisseria PilC beta-propeller domain KM317_07535 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor KM317_07535 PF07963 Prokaryotic N-terminal methylation motif KM317_07545 PF07963 Prokaryotic N-terminal methylation motif KM317_07545 PF00114 Pilin (bacterial filament) KM317_07550 PF00271 Helicase conserved C-terminal domain KM317_07550 PF04851 Type III restriction enzyme, res subunit KM317_07550 PF02151 UvrB/uvrC motif KM317_07550 PF12344 Ultra-violet resistance protein B KM317_07550 PF17757 UvrB interaction domain KM317_07565 PF02534 Type IV secretory system Conjugative DNA transfer KM317_07575 PF04335 VirB8 protein KM317_07585 PF03743 Bacterial conjugation TrbI-like protein KM317_07590 PF00437 Type II/IV secretion system protein KM317_07595 PF01464 Transglycosylase SLT domain KM317_07605 PF05101 Type IV secretory pathway, VirB3-like protein KM317_07610 PF03135 CagE, TrbE, VirB family, component of type IV transporter system KM317_07645 PF03129 Anticodon binding domain KM317_07645 PF02824 TGS domain KM317_07645 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM317_07645 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM317_07650 PF00707 Translation initiation factor IF-3, C-terminal domain KM317_07650 PF05198 Translation initiation factor IF-3, N-terminal domain KM317_07655 PF01632 Ribosomal protein L35 KM317_07660 PF00453 Ribosomal protein L20 KM317_07665 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KM317_07665 PF01409 tRNA synthetases class II core domain (F) KM317_07670 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KM317_07670 PF01588 Putative tRNA binding domain KM317_07670 PF03484 tRNA synthetase B5 domain KM317_07670 PF03483 B3/4 domain KM317_07670 PF03147 Ferredoxin-fold anticodon binding domain KM317_07675 PF00216 Bacterial DNA-binding protein KM317_07680 PF13411 MerR HTH family regulatory protein KM317_07700 PF02397 Bacterial sugar transferase KM317_07715 PF13439 Glycosyltransferase Family 4 KM317_07715 PF00534 Glycosyl transferases group 1 KM317_07725 PF14667 Polysaccharide biosynthesis C-terminal domain KM317_07740 PF03808 Glycosyl transferase WecB/TagA/CpsF family KM317_07750 PF02779 Transketolase, pyrimidine binding domain KM317_07750 PF02780 Transketolase, C-terminal domain KM317_07750 PF13292 1-deoxy-D-xylulose-5-phosphate synthase KM317_07760 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM317_07760 PF12806 Acetyl-CoA dehydrogenase C-terminal like KM317_07760 PF02770 Acyl-CoA dehydrogenase, middle domain KM317_07760 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM317_07765 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KM317_07795 PF02601 Exonuclease VII, large subunit KM317_07795 PF13742 OB-fold nucleic acid binding domain KM317_07800 PF08331 Domain of unknown function (DUF1730) KM317_07805 PF01256 Carbohydrate kinase KM317_07805 PF03853 YjeF-related protein N-terminus KM317_07810 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE KM317_07815 PF11741 AMIN domain KM317_07815 PF01520 N-acetylmuramoyl-L-alanine amidase KM317_07820 PF01119 DNA mismatch repair protein, C-terminal domain KM317_07820 PF08676 MutL C terminal dimerisation domain KM317_07835 PF05233 PHB accumulation regulatory domain KM317_07835 PF07879 PHB/PHA accumulation regulator DNA-binding domain KM317_07840 PF00106 short chain dehydrogenase KM317_07845 PF00749 tRNA synthetases class I (E and Q), catalytic domain KM317_07850 PF01435 Peptidase family M48 KM317_07855 PF00990 Diguanylate cyclase, GGDEF domain KM317_07855 PF00563 EAL domain KM317_07855 PF00072 Response regulator receiver domain KM317_07875 PF07152 YaeQ protein KM317_07880 PF00849 RNA pseudouridylate synthase KM317_07885 PF00313 'Cold-shock' DNA-binding domain KM317_07890 PF00043 Glutathione S-transferase, C-terminal domain KM317_07890 PF02798 Glutathione S-transferase, N-terminal domain KM317_07895 PF07859 alpha/beta hydrolase fold KM317_07900 PF02696 Uncharacterized ACR, YdiU/UPF0061 family KM317_07910 PF00529 HlyD membrane-fusion protein of T1SS KM317_07910 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KM317_07915 PF00873 AcrB/AcrD/AcrF family KM317_07920 PF00156 Phosphoribosyl transferase domain KM317_07925 PF00271 Helicase conserved C-terminal domain KM317_07925 PF00270 DEAD/DEAH box helicase KM317_07925 PF03880 DbpA RNA binding domain KM317_07930 PF00005 ABC transporter KM317_07930 PF16326 ABC transporter C-terminal domain KM317_07930 PF12848 ABC transporter KM317_07945 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KM317_07945 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KM317_07955 PF14310 Fibronectin type III-like domain KM317_07955 PF01915 Glycosyl hydrolase family 3 C-terminal domain KM317_07955 PF00933 Glycosyl hydrolase family 3 N terminal domain KM317_07970 PF00854 POT family KM317_08000 PF01047 MarR family KM317_08005 PF01432 Peptidase family M3 KM317_08015 PF00255 Glutathione peroxidase KM317_08020 PF00175 Oxidoreductase NAD-binding domain KM317_08020 PF00970 Oxidoreductase FAD-binding domain KM317_08030 PF00005 ABC transporter KM317_08050 PF05681 Fumarate hydratase (Fumerase) KM317_08050 PF05683 Fumarase C-terminus KM317_08060 PF02253 Phospholipase A1 KM317_08070 PF00313 'Cold-shock' DNA-binding domain KM317_08085 PF00899 ThiF family KM317_08090 PF01026 TatD related DNase KM317_08105 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM317_08105 PF02770 Acyl-CoA dehydrogenase, middle domain KM317_08105 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM317_08110 PF03358 NADPH-dependent FMN reductase KM317_08115 PF03796 DnaB-like helicase C terminal domain KM317_08115 PF00772 DnaB-like helicase N terminal domain KM317_08145 PF13356 Arm DNA-binding domain KM317_08145 PF00589 Phage integrase family KM317_08150 PF03466 LysR substrate binding domain KM317_08150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM317_08225 PF00550 Phosphopantetheine attachment site KM317_08230 PF02801 Beta-ketoacyl synthase, C-terminal domain KM317_08230 PF00109 Beta-ketoacyl synthase, N-terminal domain KM317_08235 PF00202 Aminotransferase class-III KM317_08250 PF04055 Radical SAM superfamily KM317_08250 PF06969 HemN C-terminal domain KM317_08285 PF00128 Alpha amylase, catalytic domain KM317_08285 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KM317_08295 PF03466 LysR substrate binding domain KM317_08295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM317_08315 PF08543 Phosphomethylpyrimidine kinase KM317_08315 PF02581 Thiamine monophosphate synthase KM317_08330 PF02562 PhoH-like protein KM317_08330 PF13638 PIN domain KM317_08335 PF00578 AhpC/TSA family KM317_08345 PF00701 Dihydrodipicolinate synthetase family KM317_08355 PF11953 Domain of unknown function (DUF3470) KM317_08355 PF00037 4Fe-4S binding domain KM317_08360 PF05035 2-keto-3-deoxy-galactonokinase KM317_08365 PF08450 SMP-30/Gluconolactonase/LRE-like region KM317_08370 PF13378 Enolase C-terminal domain-like KM317_08370 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KM317_08375 PF01081 KDPG and KHG aldolase KM317_08380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM317_08380 PF03466 LysR substrate binding domain KM317_08395 PF01055 Glycosyl hydrolases family 31 KM317_08395 PF17137 Domain of unknown function (DUF5110) KM317_08395 PF16338 Domain of unknown function (DUF4968) KM317_08405 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KM317_08405 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KM317_08415 PF00083 Sugar (and other) transporter KM317_08420 PF11741 AMIN domain KM317_08420 PF01520 N-acetylmuramoyl-L-alanine amidase KM317_08425 PF02649 Type I GTP cyclohydrolase folE2 KM317_08430 PF00132 Bacterial transferase hexapeptide (six repeats) KM317_08440 PF12626 Polymerase A arginine-rich C-terminus KM317_08440 PF01743 Poly A polymerase head domain KM317_08440 PF12627 Probable RNA and SrmB- binding site of polymerase A KM317_08445 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KM317_08450 PF02548 Ketopantoate hydroxymethyltransferase KM317_08455 PF02569 Pantoate-beta-alanine ligase KM317_08460 PF02261 Aspartate decarboxylase KM317_08465 PF00342 Phosphoglucose isomerase KM317_08470 PF14310 Fibronectin type III-like domain KM317_08470 PF00933 Glycosyl hydrolase family 3 N terminal domain KM317_08470 PF01915 Glycosyl hydrolase family 3 C-terminal domain KM317_08475 PF00474 Sodium:solute symporter family KM317_08480 PF00990 Diguanylate cyclase, GGDEF domain KM317_08480 PF03707 Bacterial signalling protein N terminal repeat KM317_08480 PF00563 EAL domain KM317_08485 PF00072 Response regulator receiver domain KM317_08495 PF04551 GcpE protein KM317_08500 PF01569 PAP2 superfamily KM317_08530 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KM317_08530 PF01565 FAD binding domain KM317_08535 PF01180 Dihydroorotate dehydrogenase KM317_08550 PF00171 Aldehyde dehydrogenase family KM317_08565 PF03447 Homoserine dehydrogenase, NAD binding domain KM317_08565 PF00696 Amino acid kinase family KM317_08565 PF01842 ACT domain KM317_08565 PF13840 ACT domain KM317_08565 PF00742 Homoserine dehydrogenase KM317_08570 PF00288 GHMP kinases N terminal domain KM317_08570 PF08544 GHMP kinases C terminal KM317_08575 PF13406 Transglycosylase SLT domain KM317_08580 PF07519 Tannase and feruloyl esterase KM317_08585 PF00291 Pyridoxal-phosphate dependent enzyme KM317_08585 PF14821 Threonine synthase N terminus KM317_08595 PF00027 Cyclic nucleotide-binding domain KM317_08595 PF13545 Crp-like helix-turn-helix domain KM317_08600 PF03129 Anticodon binding domain KM317_08600 PF13393 Histidyl-tRNA synthetase KM317_08610 PF08029 HisG, C-terminal domain KM317_08610 PF01634 ATP phosphoribosyltransferase KM317_08615 PF00815 Histidinol dehydrogenase KM317_08620 PF00155 Aminotransferase class I and II KM317_08625 PF00475 Imidazoleglycerol-phosphate dehydratase KM317_08630 PF00117 Glutamine amidotransferase class-I KM317_08635 PF00977 Histidine biosynthesis protein KM317_08640 PF00977 Histidine biosynthesis protein KM317_08645 PF01502 Phosphoribosyl-AMP cyclohydrolase KM317_08645 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase KM317_08665 PF03079 ARD/ARD' family KM317_08670 PF00596 Class II Aldolase and Adducin N-terminal domain KM317_08675 PF13520 Amino acid permease KM317_08680 PF13520 Amino acid permease KM317_08695 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KM317_08695 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KM317_08700 PF01565 FAD binding domain KM317_08700 PF02913 FAD linked oxidases, C-terminal domain KM317_08720 PF08207 Elongation factor P (EF-P) KOW-like domain KM317_08720 PF09285 Elongation factor P, C-terminal KM317_08720 PF01132 Elongation factor P (EF-P) OB domain KM317_08725 PF00106 short chain dehydrogenase KM317_08730 PF00682 HMGL-like KM317_08740 PF00378 Enoyl-CoA hydratase/isomerase KM317_08750 PF07664 Ferrous iron transport protein B C terminus KM317_08750 PF02421 Ferrous iron transport protein B KM317_08750 PF07670 Nucleoside recognition KM317_08770 PF00155 Aminotransferase class I and II KM317_08775 PF03475 3-alpha domain KM317_08775 PF03473 MOSC domain KM317_08780 PF05173 Dihydrodipicolinate reductase, C-terminus KM317_08780 PF01113 Dihydrodipicolinate reductase, N-terminus KM317_08785 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KM317_08785 PF00117 Glutamine amidotransferase class-I KM317_08795 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KM317_08795 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KM317_08795 PF02142 MGS-like domain KM317_08800 PF03449 Transcription elongation factor, N-terminal KM317_08800 PF01272 Transcription elongation factor, GreA/GreB, C-term KM317_08810 PF01368 DHH family KM317_08810 PF02272 DHHA1 domain KM317_08810 PF17768 RecJ OB domain KM317_08815 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) KM317_08830 PF00152 tRNA synthetases class II (D, K and N) KM317_08830 PF01336 OB-fold nucleic acid binding domain KM317_08835 PF00072 Response regulator receiver domain KM317_08840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM317_08840 PF00512 His Kinase A (phospho-acceptor) domain KM317_08840 PF01627 Hpt domain KM317_08840 PF00072 Response regulator receiver domain KM317_08845 PF00378 Enoyl-CoA hydratase/isomerase KM317_08850 PF13193 AMP-binding enzyme C-terminal domain KM317_08850 PF00501 AMP-binding enzyme KM317_08870 PF00330 Aconitase family (aconitate hydratase) KM317_08870 PF00694 Aconitase C-terminal domain KM317_08885 PF11791 Aconitate B N-terminal domain KM317_08885 PF06434 Aconitate hydratase 2 N-terminus KM317_08885 PF00330 Aconitase family (aconitate hydratase) KM317_08890 PF00990 Diguanylate cyclase, GGDEF domain KM317_08895 PF03707 Bacterial signalling protein N terminal repeat KM317_08895 PF00563 EAL domain KM317_08895 PF00990 Diguanylate cyclase, GGDEF domain KM317_08900 PF01339 CheB methylesterase KM317_08900 PF00072 Response regulator receiver domain KM317_08905 PF03975 CheD chemotactic sensory transduction KM317_08910 PF03705 CheR methyltransferase, all-alpha domain KM317_08910 PF01739 CheR methyltransferase, SAM binding domain KM317_08915 PF00672 HAMP domain KM317_08915 PF02203 Tar ligand binding domain homologue KM317_08915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM317_08925 PF00672 HAMP domain KM317_08925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM317_08925 PF02203 Tar ligand binding domain homologue KM317_08935 PF01584 CheW-like domain KM317_08945 PF02203 Tar ligand binding domain homologue KM317_08945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM317_08945 PF00672 HAMP domain KM317_08955 PF02203 Tar ligand binding domain homologue KM317_08955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM317_08955 PF00672 HAMP domain KM317_08960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM317_08960 PF02203 Tar ligand binding domain homologue KM317_08960 PF00672 HAMP domain KM317_08965 PF00672 HAMP domain KM317_08965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM317_08965 PF02203 Tar ligand binding domain homologue KM317_08975 PF00672 HAMP domain KM317_08975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM317_08975 PF02203 Tar ligand binding domain homologue KM317_08980 PF00672 HAMP domain KM317_08980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM317_08980 PF02203 Tar ligand binding domain homologue KM317_08985 PF02203 Tar ligand binding domain homologue KM317_08985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM317_08985 PF00672 HAMP domain KM317_08990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM317_08990 PF02203 Tar ligand binding domain homologue KM317_08990 PF00672 HAMP domain KM317_09000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM317_09000 PF01584 CheW-like domain KM317_09000 PF09078 CheY binding KM317_09000 PF02895 Signal transducing histidine kinase, homodimeric domain KM317_09000 PF01627 Hpt domain KM317_09005 PF00072 Response regulator receiver domain KM317_09015 PF01584 CheW-like domain KM317_09020 PF13614 AAA domain KM317_09025 PF13677 Membrane MotB of proton-channel complex MotA/MotB KM317_09025 PF00691 OmpA family KM317_09030 PF01618 MotA/TolQ/ExbB proton channel family KM317_09035 PF00072 Response regulator receiver domain KM317_09035 PF01584 CheW-like domain KM317_09035 PF01627 Hpt domain KM317_09035 PF02895 Signal transducing histidine kinase, homodimeric domain KM317_09035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM317_09040 PF04344 Chemotaxis phosphatase, CheZ KM317_09045 PF00072 Response regulator receiver domain KM317_09050 PF04539 Sigma-70 region 3 KM317_09050 PF04545 Sigma-70, region 4 KM317_09050 PF04542 Sigma-70 region 2 KM317_09055 PF10609 NUBPL iron-transfer P-loop NTPase KM317_09060 PF00448 SRP54-type protein, GTPase domain KM317_09065 PF00771 FHIPEP family KM317_09070 PF01312 FlhB HrpN YscU SpaS Family KM317_09075 PF00990 Diguanylate cyclase, GGDEF domain KM317_09080 PF00990 Diguanylate cyclase, GGDEF domain KM317_09090 PF01311 Bacterial export proteins, family 1 KM317_09095 PF01313 Bacterial export proteins, family 3 KM317_09100 PF00813 FliP family KM317_09105 PF04347 Flagellar biosynthesis protein, FliO KM317_09110 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KM317_09115 PF02154 Flagellar motor switch protein FliM KM317_09115 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KM317_09135 PF18269 T3SS EscN ATPase C-terminal domain KM317_09135 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KM317_09145 PF14842 FliG N-terminal domain KM317_09145 PF14841 FliG middle domain KM317_09145 PF01706 FliG C-terminal domain KM317_09150 PF01514 Secretory protein of YscJ/FliF family KM317_09150 PF08345 Flagellar M-ring protein C-terminal KM317_09155 PF02049 Flagellar hook-basal body complex protein FliE KM317_09160 PF00534 Glycosyl transferases group 1 KM317_09160 PF00535 Glycosyl transferase family 2 KM317_09180 PF02348 Cytidylyltransferase KM317_09225 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KM317_09225 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KM317_09235 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KM317_09240 PF06490 Flagellar regulatory protein FleQ KM317_09240 PF02954 Bacterial regulatory protein, Fis family KM317_09240 PF00158 Sigma-54 interaction domain KM317_09245 PF01339 CheB methylesterase KM317_09245 PF00072 Response regulator receiver domain KM317_09250 PF04552 Sigma-54, DNA binding domain KM317_09250 PF04963 Sigma-54 factor, core binding domain KM317_09250 PF00309 Sigma-54 factor, Activator interacting domain (AID) KM317_09255 PF00196 Bacterial regulatory proteins, luxR family KM317_09255 PF00072 Response regulator receiver domain KM317_09270 PF02561 Flagellar protein FliS KM317_09275 PF07196 Flagellin hook IN motif KM317_09275 PF02465 Flagellar hook-associated protein 2 N-terminus KM317_09275 PF07195 Flagellar hook-associated protein 2 C-terminus KM317_09280 PF00700 Bacterial flagellin C-terminal helical region KM317_09280 PF00669 Bacterial flagellin N-terminal helical region KM317_09285 PF00669 Bacterial flagellin N-terminal helical region KM317_09290 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KM317_09290 PF00460 Flagella basal body rod protein KM317_09295 PF10135 Rod binding protein KM317_09295 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase KM317_09300 PF02119 Flagellar P-ring protein KM317_09305 PF02107 Flagellar L-ring protein KM317_09310 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KM317_09310 PF00460 Flagella basal body rod protein KM317_09315 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KM317_09315 PF00460 Flagella basal body rod protein KM317_09320 PF00460 Flagella basal body rod protein KM317_09320 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KM317_09320 PF07559 Flagellar basal body protein FlaE KM317_09325 PF03963 Flagellar hook capping protein - N-terminal region KM317_09325 PF13860 FlgD Ig-like domain KM317_09325 PF13861 FlgD Tudor-like domain KM317_09330 PF00460 Flagella basal body rod protein KM317_09330 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KM317_09340 PF00072 Response regulator receiver domain KM317_09340 PF01584 CheW-like domain KM317_09360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM317_09360 PF00512 His Kinase A (phospho-acceptor) domain KM317_09360 PF08448 PAS fold KM317_09360 PF13188 PAS domain KM317_09360 PF00072 Response regulator receiver domain KM317_09365 PF00990 Diguanylate cyclase, GGDEF domain KM317_09365 PF03707 Bacterial signalling protein N terminal repeat KM317_09365 PF00563 EAL domain KM317_09370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM317_09370 PF07730 Histidine kinase KM317_09375 PF00563 EAL domain KM317_09375 PF03707 Bacterial signalling protein N terminal repeat KM317_09375 PF00990 Diguanylate cyclase, GGDEF domain KM317_09385 PF00005 ABC transporter KM317_09400 PF00672 HAMP domain KM317_09400 PF12729 Four helix bundle sensory module for signal transduction KM317_09400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM317_09405 PF04356 Protein of unknown function (DUF489) KM317_09415 PF00293 NUDIX domain KM317_09425 PF02617 ATP-dependent Clp protease adaptor protein ClpS KM317_09430 PF00004 ATPase family associated with various cellular activities (AAA) KM317_09430 PF02861 Clp amino terminal domain, pathogenicity island component KM317_09430 PF17871 AAA lid domain KM317_09430 PF10431 C-terminal, D2-small domain, of ClpB protein KM317_09430 PF07724 AAA domain (Cdc48 subfamily) KM317_09435 PF01176 Translation initiation factor 1A / IF-1 KM317_09440 PF03588 Leucyl/phenylalanyl-tRNA protein transferase KM317_09450 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM317_09455 PF09397 Ftsk gamma domain KM317_09455 PF01580 FtsK/SpoIIIE family KM317_09455 PF17854 FtsK alpha domain KM317_09455 PF13491 4TM region of DNA translocase FtsK/SpoIIIE KM317_09465 PF03548 Outer membrane lipoprotein carrier protein LolA KM317_09475 PF12002 MgsA AAA+ ATPase C terminal KM317_09475 PF16193 AAA C-terminal domain KM317_09475 PF00004 ATPase family associated with various cellular activities (AAA) KM317_09480 PF00654 Voltage gated chloride channel KM317_09520 PF03918 Cytochrome C biogenesis protein KM317_09525 PF08534 Redoxin KM317_09530 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal KM317_09530 PF01578 Cytochrome C assembly protein KM317_09535 PF03100 CcmE KM317_09545 PF01578 Cytochrome C assembly protein KM317_09550 PF00082 Subtilase family KM317_09560 PF08281 Sigma-70, region 4 KM317_09560 PF04542 Sigma-70 region 2 KM317_09570 PF00034 Cytochrome c KM317_09580 PF01292 Prokaryotic cytochrome b561 KM317_09585 PF05523 WxcM-like, C-terminal KM317_09605 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KM317_09610 PF01943 Polysaccharide biosynthesis protein KM317_09615 PF00535 Glycosyl transferase family 2 KM317_09650 PF13439 Glycosyltransferase Family 4 KM317_09650 PF00534 Glycosyl transferases group 1 KM317_09655 PF13579 Glycosyl transferase 4-like domain KM317_09655 PF00534 Glycosyl transferases group 1 KM317_09675 PF00005 ABC transporter KM317_09675 PF00664 ABC transporter transmembrane region KM317_09685 PF00202 Aminotransferase class-III KM317_09690 PF01070 FMN-dependent dehydrogenase KM317_09695 PF00155 Aminotransferase class I and II KM317_09710 PF00501 AMP-binding enzyme KM317_09710 PF13193 AMP-binding enzyme C-terminal domain KM317_09710 PF00668 Condensation domain KM317_09710 PF00550 Phosphopantetheine attachment site KM317_09710 PF00975 Thioesterase domain KM317_09715 PF00975 Thioesterase domain KM317_09715 PF00501 AMP-binding enzyme KM317_09715 PF13193 AMP-binding enzyme C-terminal domain KM317_09715 PF00668 Condensation domain KM317_09715 PF00550 Phosphopantetheine attachment site KM317_09720 PF13193 AMP-binding enzyme C-terminal domain KM317_09720 PF00550 Phosphopantetheine attachment site KM317_09720 PF00668 Condensation domain KM317_09720 PF00975 Thioesterase domain KM317_09720 PF00501 AMP-binding enzyme KM317_09725 PF00668 Condensation domain KM317_09725 PF00501 AMP-binding enzyme KM317_09725 PF00975 Thioesterase domain KM317_09725 PF00550 Phosphopantetheine attachment site KM317_09725 PF13193 AMP-binding enzyme C-terminal domain KM317_09730 PF00975 Thioesterase domain KM317_09730 PF00550 Phosphopantetheine attachment site KM317_09730 PF00668 Condensation domain KM317_09730 PF13193 AMP-binding enzyme C-terminal domain KM317_09730 PF00501 AMP-binding enzyme KM317_09735 PF00550 Phosphopantetheine attachment site KM317_09735 PF00668 Condensation domain KM317_09735 PF13193 AMP-binding enzyme C-terminal domain KM317_09735 PF00501 AMP-binding enzyme KM317_09740 PF00195 Chalcone and stilbene synthases, N-terminal domain KM317_09740 PF02797 Chalcone and stilbene synthases, C-terminal domain KM317_09750 PF00378 Enoyl-CoA hydratase/isomerase KM317_09755 PF00155 Aminotransferase class I and II KM317_09760 PF00378 Enoyl-CoA hydratase/isomerase KM317_09765 PF00664 ABC transporter transmembrane region KM317_09765 PF00005 ABC transporter KM317_09770 PF03621 MbtH-like protein KM317_09775 PF18456 Diiron non-heme beta-hydroxylase N-terminal domain KM317_09775 PF12706 Beta-lactamase superfamily domain KM317_09780 PF18456 Diiron non-heme beta-hydroxylase N-terminal domain KM317_09780 PF12706 Beta-lactamase superfamily domain KM317_09840 PF12704 MacB-like periplasmic core domain KM317_09840 PF00005 ABC transporter KM317_09840 PF02687 FtsX-like permease family KM317_09855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM317_09855 PF00512 His Kinase A (phospho-acceptor) domain KM317_09860 PF00072 Response regulator receiver domain KM317_09860 PF00486 Transcriptional regulatory protein, C terminal KM317_09870 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KM317_09875 PF00294 pfkB family carbohydrate kinase KM317_09880 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KM317_09880 PF00381 PTS HPr component phosphorylation site KM317_09880 PF02896 PEP-utilising enzyme, TIM barrel domain KM317_09880 PF00391 PEP-utilising enzyme, mobile domain KM317_09880 PF05524 PEP-utilising enzyme, N-terminal KM317_09885 PF00356 Bacterial regulatory proteins, lacI family KM317_09900 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KM317_09900 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KM317_09900 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KM317_09905 PF01645 Conserved region in glutamate synthase KM317_09910 PF13673 Acetyltransferase (GNAT) domain KM317_09915 PF00990 Diguanylate cyclase, GGDEF domain KM317_09915 PF03707 Bacterial signalling protein N terminal repeat KM317_09915 PF00563 EAL domain KM317_09925 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KM317_09935 PF00581 Rhodanese-like domain KM317_09935 PF17773 UPF0176 acylphosphatase like domain KM317_09945 PF00296 Luciferase-like monooxygenase KM317_09960 PF00571 CBS domain KM317_09960 PF03471 Transporter associated domain KM317_09960 PF01595 Cyclin M transmembrane N-terminal domain KM317_09970 PF01384 Phosphate transporter family KM317_09980 PF01751 Toprim domain KM317_09980 PF00204 DNA gyrase B KM317_09980 PF00986 DNA gyrase B subunit, carboxyl terminus KM317_09980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM317_09990 PF06418 CTP synthase N-terminus KM317_09990 PF00117 Glutamine amidotransferase class-I KM317_09995 PF00793 DAHP synthetase I family KM317_10000 PF00113 Enolase, C-terminal TIM barrel domain KM317_10000 PF03952 Enolase, N-terminal domain KM317_10005 PF04977 Septum formation initiator KM317_10010 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KM317_10015 PF02542 YgbB family KM317_10020 PF01142 tRNA pseudouridine synthase D (TruD) KM317_10025 PF01713 Smr domain KM317_10030 PF01975 Survival protein SurE KM317_10040 PF09335 SNARE associated Golgi protein KM317_10045 PF01476 LysM domain KM317_10045 PF01551 Peptidase family M23 KM317_10055 PF01985 CRS1 / YhbY (CRM) domain KM317_10060 PF01728 FtsJ-like methyltransferase KM317_10065 PF00004 ATPase family associated with various cellular activities (AAA) KM317_10065 PF17862 AAA+ lid domain KM317_10065 PF06480 FtsH Extracellular KM317_10065 PF01434 Peptidase family M41 KM317_10070 PF00809 Pterin binding enzyme KM317_10080 PF17209 Hfq protein KM317_10085 PF16360 GTP-binding GTPase Middle Region KM317_10085 PF13167 GTP-binding GTPase N-terminal KM317_10085 PF01926 50S ribosome-binding GTPase KM317_10090 PF02464 Competence-damaged protein KM317_10095 PF03109 ABC1 family KM317_10100 PF00717 Peptidase S24-like KM317_10100 PF01726 LexA DNA binding domain KM317_10105 PF00154 recA bacterial DNA recombination protein KM317_10110 PF02631 RecX family KM317_10115 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM317_10115 PF01411 tRNA synthetases class II (A) KM317_10115 PF02272 DHHA1 domain KM317_10120 PF02599 Global regulator protein family KM317_10150 PF13426 PAS domain KM317_10150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM317_10150 PF00072 Response regulator receiver domain KM317_10155 PF02954 Bacterial regulatory protein, Fis family KM317_10155 PF00072 Response regulator receiver domain KM317_10155 PF00158 Sigma-54 interaction domain KM317_10160 PF02954 Bacterial regulatory protein, Fis family KM317_10160 PF00072 Response regulator receiver domain KM317_10160 PF00158 Sigma-54 interaction domain KM317_10165 PF00875 DNA photolyase KM317_10165 PF03441 FAD binding domain of DNA photolyase KM317_10170 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain KM317_10170 PF06974 Protein of unknown function (DUF1298) KM317_10175 PF00691 OmpA family KM317_10175 PF05736 OprF membrane domain KM317_10180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM317_10180 PF03466 LysR substrate binding domain KM317_10195 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KM317_10195 PF00529 HlyD membrane-fusion protein of T1SS KM317_10200 PF00873 AcrB/AcrD/AcrF family KM317_10205 PF00106 short chain dehydrogenase KM317_10210 PF02321 Outer membrane efflux protein KM317_10240 PF00082 Subtilase family KM317_10245 PF01668 SmpB protein KM317_10250 PF03364 Polyketide cyclase / dehydrase and lipid transport KM317_10255 PF03658 RnfH family Ubiquitin KM317_10260 PF04355 SmpA / OmlA family KM317_10265 PF01475 Ferric uptake regulator family KM317_10270 PF02463 RecF/RecN/SMC N terminal domain KM317_10275 PF01628 HrcA protein C terminal domain KM317_10275 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding KM317_10280 PF01025 GrpE KM317_10285 PF00012 Hsp70 protein KM317_10290 PF00684 DnaJ central domain KM317_10290 PF01556 DnaJ C terminal domain KM317_10290 PF00226 DnaJ domain KM317_10295 PF08543 Phosphomethylpyrimidine kinase KM317_10300 PF01817 Chorismate mutase type II KM317_10300 PF02153 Prephenate dehydrogenase KM317_10315 PF00005 ABC transporter KM317_10315 PF00664 ABC transporter transmembrane region KM317_10320 PF01205 Uncharacterized protein family UPF0029 KM317_10335 PF04542 Sigma-70 region 2 KM317_10335 PF08281 Sigma-70, region 4 KM317_10340 PF00563 EAL domain KM317_10340 PF03707 Bacterial signalling protein N terminal repeat KM317_10340 PF00990 Diguanylate cyclase, GGDEF domain KM317_10345 PF03641 Possible lysine decarboxylase KM317_10350 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM317_10350 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM317_10355 PF00364 Biotin-requiring enzyme KM317_10355 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KM317_10355 PF02817 e3 binding domain KM317_10360 PF00676 Dehydrogenase E1 component KM317_10360 PF16078 2-oxoglutarate dehydrogenase N-terminus KM317_10360 PF02779 Transketolase, pyrimidine binding domain KM317_10360 PF16870 2-oxoglutarate dehydrogenase C-terminal KM317_10370 PF08007 Cupin superfamily protein KM317_10380 PF00691 OmpA family KM317_10380 PF00223 Photosystem I psaA/psaB protein KM317_10390 PF08328 Adenylosuccinate lyase C-terminal KM317_10390 PF00206 Lyase KM317_10400 PF00206 Lyase KM317_10400 PF10415 Fumarase C C-terminus KM317_10430 PF00005 ABC transporter KM317_10435 PF00392 Bacterial regulatory proteins, gntR family KM317_10445 PF00255 Glutathione peroxidase KM317_10450 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KM317_10450 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KM317_10455 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KM317_10455 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KM317_10455 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KM317_10460 PF04102 SlyX KM317_10470 PF01757 Acyltransferase family KM317_10480 PF02310 B12 binding domain KM317_10480 PF02607 B12 binding domain KM317_10480 PF02965 Vitamin B12 dependent methionine synthase, activation domain KM317_10480 PF00809 Pterin binding enzyme KM317_10480 PF02574 Homocysteine S-methyltransferase KM317_10485 PF00809 Pterin binding enzyme KM317_10485 PF02574 Homocysteine S-methyltransferase KM317_10490 PF01209 ubiE/COQ5 methyltransferase family KM317_10495 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM317_10495 PF02770 Acyl-CoA dehydrogenase, middle domain KM317_10495 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM317_10500 PF00873 AcrB/AcrD/AcrF family KM317_10505 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KM317_10505 PF00529 HlyD membrane-fusion protein of T1SS KM317_10520 PF05088 Bacterial NAD-glutamate dehydrogenase KM317_10525 PF01513 ATP-NAD kinase KM317_10550 PF08411 Exonuclease C-terminal KM317_10550 PF00929 Exonuclease KM317_10555 PF01494 FAD binding domain KM317_10560 PF00266 Aminotransferase class-V KM317_10570 PF06052 3-hydroxyanthranilic acid dioxygenase KM317_10575 PF00484 Carbonic anhydrase KM317_10620 PF00196 Bacterial regulatory proteins, luxR family KM317_10620 PF00072 Response regulator receiver domain KM317_10640 PF00152 tRNA synthetases class II (D, K and N) KM317_10640 PF01336 OB-fold nucleic acid binding domain KM317_10645 PF01521 Iron-sulphur cluster biosynthesis KM317_10650 PF17837 4'-phosphopantetheinyl transferase N-terminal domain KM317_10650 PF01648 4'-phosphopantetheinyl transferase superfamily KM317_10655 PF01250 Ribosomal protein S6 KM317_10660 PF01084 Ribosomal protein S18 KM317_10665 PF03948 Ribosomal protein L9, C-terminal domain KM317_10665 PF01281 Ribosomal protein L9, N-terminal domain KM317_10670 PF02463 RecF/RecN/SMC N terminal domain KM317_10675 PF04354 ZipA, C-terminal FtsZ-binding domain KM317_10680 PF00155 Aminotransferase class I and II KM317_10685 PF12826 Helix-hairpin-helix motif KM317_10685 PF03120 NAD-dependent DNA ligase OB-fold domain KM317_10685 PF01653 NAD-dependent DNA ligase adenylation domain KM317_10685 PF00533 BRCA1 C Terminus (BRCT) domain KM317_10685 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KM317_10690 PF00152 tRNA synthetases class II (D, K and N) KM317_10700 PF01008 Initiation factor 2 subunit family KM317_10705 PF03989 DNA gyrase C-terminal domain, beta-propeller KM317_10705 PF00521 DNA gyrase/topoisomerase IV, subunit A KM317_10725 PF00440 Bacterial regulatory proteins, tetR family KM317_10745 PF01175 Urocanase Rossmann-like domain KM317_10745 PF17392 Urocanase C-terminal domain KM317_10745 PF17391 Urocanase N-terminal domain KM317_10760 PF00221 Aromatic amino acid lyase KM317_10765 PF07969 Amidohydrolase family KM317_10780 PF00106 short chain dehydrogenase KM317_10815 PF01794 Ferric reductase like transmembrane component KM317_10820 PF00174 Oxidoreductase molybdopterin binding domain KM317_10825 PF00266 Aminotransferase class-V KM317_10830 PF01842 ACT domain KM317_10830 PF01817 Chorismate mutase type II KM317_10830 PF00800 Prephenate dehydratase KM317_10835 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KM317_10845 PF03544 Gram-negative bacterial TonB protein C-terminal KM317_10850 PF02403 Seryl-tRNA synthetase N-terminal domain KM317_10850 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM317_10855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM317_10855 PF03466 LysR substrate binding domain KM317_10870 PF00072 Response regulator receiver domain KM317_10870 PF00196 Bacterial regulatory proteins, luxR family KM317_10880 PF12111 Polyribonucleotide phosphorylase C terminal KM317_10880 PF00575 S1 RNA binding domain KM317_10880 PF10150 Ribonuclease E/G family KM317_10885 PF01479 S4 domain KM317_10885 PF00849 RNA pseudouridylate synthase KM317_10895 PF02535 ZIP Zinc transporter KM317_10905 PF01329 Pterin 4 alpha carbinolamine dehydratase KM317_10910 PF01106 NifU-like domain KM317_10920 PF00034 Cytochrome c KM317_10925 PF00034 Cytochrome c KM317_10930 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KM317_10930 PF00529 HlyD membrane-fusion protein of T1SS KM317_10935 PF00873 AcrB/AcrD/AcrF family KM317_10940 PF00873 AcrB/AcrD/AcrF family KM317_10950 PF00795 Carbon-nitrogen hydrolase KM317_10955 PF04371 Porphyromonas-type peptidyl-arginine deiminase KM317_10965 PF00444 Ribosomal protein L36 KM317_10970 PF02224 Cytidylate kinase KM317_10975 PF00575 S1 RNA binding domain KM317_10980 PF00216 Bacterial DNA-binding protein KM317_10990 PF18073 Rubredoxin metal binding domain KM317_10995 PF00953 Glycosyl transferase family 4 KM317_11000 PF02719 Polysaccharide biosynthesis protein KM317_11005 PF00483 Nucleotidyl transferase KM317_11010 PF02803 Thiolase, C-terminal domain KM317_11010 PF00108 Thiolase, N-terminal domain KM317_11015 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KM317_11015 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KM317_11015 PF00378 Enoyl-CoA hydratase/isomerase KM317_11025 PF00334 Nucleoside diphosphate kinase KM317_11030 PF04055 Radical SAM superfamily KM317_11040 PF13464 Domain of unknown function (DUF4115) KM317_11050 PF01011 PQQ enzyme repeat KM317_11050 PF13360 PQQ-like domain KM317_11055 PF01926 50S ribosome-binding GTPase KM317_11055 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KM317_11060 PF12804 MobA-like NTP transferase domain KM317_11065 PF00994 Probable molybdopterin binding domain KM317_11065 PF03454 MoeA C-terminal region (domain IV) KM317_11065 PF03453 MoeA N-terminal region (domain I and II) KM317_11070 PF00899 ThiF family KM317_11075 PF00999 Sodium/hydrogen exchanger family KM317_11075 PF02254 TrkA-N domain KM317_11090 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KM317_11090 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KM317_11095 PF00571 CBS domain KM317_11095 PF00478 IMP dehydrogenase / GMP reductase domain KM317_11100 PF00117 Glutamine amidotransferase class-I KM317_11100 PF00958 GMP synthase C terminal domain KM317_11100 PF02540 NAD synthase KM317_11145 PF02638 Glycosyl hydrolase-like 10 KM317_11175 PF00512 His Kinase A (phospho-acceptor) domain KM317_11175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM317_11175 PF00672 HAMP domain KM317_11180 PF00072 Response regulator receiver domain KM317_11180 PF00486 Transcriptional regulatory protein, C terminal KM317_11185 PF02321 Outer membrane efflux protein KM317_11200 PF00873 AcrB/AcrD/AcrF family KM317_11235 PF00072 Response regulator receiver domain KM317_11235 PF00512 His Kinase A (phospho-acceptor) domain KM317_11235 PF09308 LuxQ, periplasmic KM317_11235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM317_11240 PF16921 Tex protein YqgF-like domain KM317_11240 PF00575 S1 RNA binding domain KM317_11240 PF17674 HHH domain KM317_11240 PF09371 Tex-like protein N-terminal domain KM317_11245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM317_11245 PF13426 PAS domain KM317_11245 PF00072 Response regulator receiver domain KM317_11275 PF00561 alpha/beta hydrolase fold KM317_11285 PF01066 CDP-alcohol phosphatidyltransferase KM317_11305 PF03618 Kinase/pyrophosphorylase KM317_11310 PF02896 PEP-utilising enzyme, TIM barrel domain KM317_11310 PF00391 PEP-utilising enzyme, mobile domain KM317_11310 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KM317_11315 PF00924 Mechanosensitive ion channel KM317_11315 PF05552 Conserved TM helix KM317_11320 PF00929 Exonuclease KM317_11325 PF14437 MafB19-like deaminase KM317_11330 PF02742 Iron dependent repressor, metal binding and dimerisation domain KM317_11330 PF01325 Iron dependent repressor, N-terminal DNA binding domain KM317_11335 PF01566 Natural resistance-associated macrophage protein KM317_11340 PF08448 PAS fold KM317_11340 PF13188 PAS domain KM317_11340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM317_11340 PF00072 Response regulator receiver domain KM317_11340 PF00512 His Kinase A (phospho-acceptor) domain KM317_11345 PF06745 KaiC KM317_11350 PF17137 Domain of unknown function (DUF5110) KM317_11350 PF16338 Domain of unknown function (DUF4968) KM317_11350 PF01055 Glycosyl hydrolases family 31 KM317_11355 PF12833 Helix-turn-helix domain KM317_11355 PF02311 AraC-like ligand binding domain KM317_11365 PF02321 Outer membrane efflux protein KM317_11375 PF00529 HlyD membrane-fusion protein of T1SS KM317_11375 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KM317_11380 PF07715 TonB-dependent Receptor Plug Domain KM317_11380 PF07660 Secretin and TonB N terminus short domain KM317_11380 PF00593 TonB dependent receptor KM317_11400 PF01066 CDP-alcohol phosphatidyltransferase KM317_11405 PF01541 GIY-YIG catalytic domain KM317_11405 PF02151 UvrB/uvrC motif KM317_11405 PF08459 UvrC Helix-hairpin-helix N-terminal KM317_11415 PF01451 Low molecular weight phosphotyrosine protein phosphatase KM317_11420 PF02348 Cytidylyltransferase KM317_11425 PF02606 Tetraacyldisaccharide-1-P 4'-kinase KM317_11430 PF00005 ABC transporter KM317_11430 PF00664 ABC transporter transmembrane region KM317_11435 PF02472 Biopolymer transport protein ExbD/TolR KM317_11440 PF01618 MotA/TolQ/ExbB proton channel family KM317_11445 PF00753 Metallo-beta-lactamase superfamily KM317_11445 PF03772 Competence protein KM317_11465 PF00005 ABC transporter KM317_11470 PF12704 MacB-like periplasmic core domain KM317_11470 PF02687 FtsX-like permease family KM317_11480 PF03937 Flavinator of succinate dehydrogenase KM317_11485 PF13085 2Fe-2S iron-sulfur cluster binding domain KM317_11485 PF13237 4Fe-4S dicluster domain KM317_11490 PF02910 Fumarate reductase flavoprotein C-term KM317_11490 PF00890 FAD binding domain KM317_11495 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KM317_11500 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KM317_11510 PF01571 Aminomethyltransferase folate-binding domain KM317_11515 PF00005 ABC transporter KM317_11515 PF17912 MalK OB fold domain KM317_11520 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain KM317_11520 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain KM317_11525 PF02685 Glucokinase KM317_11530 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase KM317_11535 PF00920 Dehydratase family KM317_11540 PF01081 KDPG and KHG aldolase KM317_11550 PF00528 Binding-protein-dependent transport system inner membrane component KM317_11555 PF00528 Binding-protein-dependent transport system inner membrane component KM317_11575 PF00356 Bacterial regulatory proteins, lacI family KM317_11585 PF03795 YCII-related domain KM317_11590 PF02616 Segregation and condensation protein ScpA KM317_11595 PF04079 Segregation and condensation complex subunit ScpB KM317_11600 PF00849 RNA pseudouridylate synthase KM317_11600 PF01479 S4 domain KM317_11615 PF02611 CDP-diacylglycerol pyrophosphatase KM317_11630 PF00795 Carbon-nitrogen hydrolase KM317_11635 PF00155 Aminotransferase class I and II KM317_11640 PF00005 ABC transporter KM317_11645 PF03379 CcmB protein KM317_11650 PF01578 Cytochrome C assembly protein KM317_11660 PF03100 CcmE KM317_11665 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal KM317_11665 PF01578 Cytochrome C assembly protein KM317_11670 PF08534 Redoxin KM317_11675 PF03918 Cytochrome C biogenesis protein KM317_11685 PF00561 alpha/beta hydrolase fold KM317_11690 PF00664 ABC transporter transmembrane region KM317_11690 PF00005 ABC transporter KM317_11695 PF00664 ABC transporter transmembrane region KM317_11695 PF00005 ABC transporter KM317_11700 PF01654 Cytochrome bd terminal oxidase subunit I KM317_11705 PF02322 Cytochrome bd terminal oxidase subunit II KM317_11725 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain KM317_11725 PF02129 X-Pro dipeptidyl-peptidase (S15 family) KM317_11730 PF00171 Aldehyde dehydrogenase family KM317_11735 PF00696 Amino acid kinase family KM317_11735 PF01472 PUA domain KM317_11750 PF00206 Lyase KM317_11755 PF01118 Semialdehyde dehydrogenase, NAD binding domain KM317_11765 PF00696 Amino acid kinase family KM317_11765 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase KM317_11770 PF07687 Peptidase dimerisation domain KM317_11770 PF01546 Peptidase family M20/M25/M40 KM317_11780 PF00764 Arginosuccinate synthase KM317_11785 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KM317_11785 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KM317_11795 PF09190 DALR domain KM317_11795 PF01406 tRNA synthetases class I (C) catalytic domain KM317_11800 PF02657 Fe-S metabolism associated domain KM317_11805 PF07690 Major Facilitator Superfamily KM317_11810 PF00561 alpha/beta hydrolase fold KM317_11845 PF01258 Prokaryotic dksA/traR C4-type zinc finger KM317_11850 PF01809 Putative membrane protein insertion efficiency factor KM317_11855 PF01979 Amidohydrolase family KM317_11860 PF01551 Peptidase family M23 KM317_11860 PF08460 Bacterial SH3 domain KM317_11865 PF01095 Pectinesterase KM317_11870 PF00295 Glycosyl hydrolases family 28 KM317_11875 PF01095 Pectinesterase KM317_11885 PF13419 Haloacid dehalogenase-like hydrolase KM317_11895 PF01979 Amidohydrolase family KM317_11900 PF06736 Protein of unknown function (DUF1211) KM317_11905 PF08207 Elongation factor P (EF-P) KOW-like domain KM317_11905 PF09285 Elongation factor P, C-terminal KM317_11905 PF01132 Elongation factor P (EF-P) OB domain KM317_11910 PF04055 Radical SAM superfamily KM317_11915 PF03707 Bacterial signalling protein N terminal repeat KM317_11915 PF00990 Diguanylate cyclase, GGDEF domain KM317_11915 PF00563 EAL domain KM317_11925 PF00588 SpoU rRNA Methylase family KM317_11930 PF00459 Inositol monophosphatase family KM317_11935 PF07549 SecD/SecF GG Motif KM317_11935 PF02355 Protein export membrane protein KM317_11940 PF07549 SecD/SecF GG Motif KM317_11940 PF13721 SecD export protein N-terminal TM region KM317_11940 PF02355 Protein export membrane protein KM317_11945 PF02699 Preprotein translocase subunit KM317_11950 PF01702 Queuine tRNA-ribosyltransferase KM317_11955 PF02547 Queuosine biosynthesis protein KM317_11965 PF00202 Aminotransferase class-III KM317_11985 PF00759 Glycosyl hydrolase family 9 KM317_11985 PF02927 Cellulase N-terminal ig-like domain KM317_11990 PF00753 Metallo-beta-lactamase superfamily KM317_12015 PF18417 L-lysine epsilon oxidase C-terminal domain KM317_12015 PF17990 L-Lysine epsilon oxidase N-terminal KM317_12020 PF01494 FAD binding domain KM317_12045 PF00037 4Fe-4S binding domain KM317_12055 PF01467 Cytidylyltransferase-like KM317_12065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM317_12065 PF00183 Hsp90 protein KM317_12070 PF02615 Malate/L-lactate dehydrogenase KM317_12075 PF07715 TonB-dependent Receptor Plug Domain KM317_12075 PF00593 TonB dependent receptor KM317_12085 PF07715 TonB-dependent Receptor Plug Domain KM317_12085 PF00593 TonB dependent receptor KM317_12090 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region KM317_12090 PF00326 Prolyl oligopeptidase family KM317_12095 PF04616 Glycosyl hydrolases family 43 KM317_12100 PF07532 Bacterial Ig-like domain (group 4) KM317_12105 PF07715 TonB-dependent Receptor Plug Domain KM317_12105 PF00593 TonB dependent receptor KM317_12130 PF13520 Amino acid permease KM317_12145 PF00557 Metallopeptidase family M24 KM317_12145 PF01321 Creatinase/Prolidase N-terminal domain KM317_12150 PF00171 Aldehyde dehydrogenase family KM317_12155 PF00701 Dihydrodipicolinate synthetase family KM317_12160 PF04324 BFD-like [2Fe-2S] binding domain KM317_12160 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM317_12170 PF01266 FAD dependent oxidoreductase KM317_12175 PF05544 Proline racemase KM317_12185 PF00448 SRP54-type protein, GTPase domain KM317_12185 PF02881 SRP54-type protein, helical bundle domain KM317_12190 PF00633 Helix-hairpin-helix motif KM317_12190 PF00730 HhH-GPD superfamily base excision DNA repair protein KM317_12190 PF14815 NUDIX domain KM317_12190 PF10576 Iron-sulfur binding domain of endonuclease III KM317_12195 PF04362 Bacterial Fe(2+) trafficking KM317_12215 PF01612 3'-5' exonuclease KM317_12215 PF00570 HRDC domain KM317_12230 PF13356 Arm DNA-binding domain KM317_12230 PF00589 Phage integrase family KM317_12255 PF01584 CheW-like domain KM317_12260 PF02203 Tar ligand binding domain homologue KM317_12260 PF00672 HAMP domain KM317_12260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM317_12265 PF02743 Cache domain KM317_12265 PF00672 HAMP domain KM317_12265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM317_12270 PF00270 DEAD/DEAH box helicase KM317_12270 PF08494 DEAD/H associated KM317_12270 PF00271 Helicase conserved C-terminal domain KM317_12280 PF03707 Bacterial signalling protein N terminal repeat KM317_12280 PF00990 Diguanylate cyclase, GGDEF domain KM317_12280 PF00563 EAL domain KM317_12280 PF13188 PAS domain KM317_12285 PF00575 S1 RNA binding domain KM317_12285 PF00013 KH domain KM317_12285 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KM317_12285 PF03725 3' exoribonuclease family, domain 2 KM317_12285 PF01138 3' exoribonuclease family, domain 1 KM317_12290 PF00312 Ribosomal protein S15 KM317_12295 PF09157 Pseudouridine synthase II TruB, C-terminal KM317_12295 PF16198 tRNA pseudouridylate synthase B C-terminal domain KM317_12295 PF01509 TruB family pseudouridylate synthase (N terminal domain) KM317_12300 PF02033 Ribosome-binding factor A KM317_12305 PF04760 Translation initiation factor IF-2, N-terminal region KM317_12305 PF00009 Elongation factor Tu GTP binding domain KM317_12305 PF11987 Translation-initiation factor 2 KM317_12305 PF08364 Bacterial translation initiation factor IF-2 associated region KM317_12310 PF00575 S1 RNA binding domain KM317_12310 PF13184 NusA-like KH domain KM317_12310 PF08529 NusA N-terminal domain KM317_12315 PF02576 RimP N-terminal domain KM317_12315 PF17384 RimP C-terminal SH3 domain KM317_12325 PF00361 Proton-conducting membrane transporter KM317_12330 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus KM317_12330 PF00361 Proton-conducting membrane transporter KM317_12335 PF00361 Proton-conducting membrane transporter KM317_12335 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KM317_12340 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KM317_12345 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 KM317_12350 PF12838 4Fe-4S dicluster domain KM317_12355 PF00146 NADH dehydrogenase KM317_12360 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KM317_12360 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal KM317_12360 PF00384 Molybdopterin oxidoreductase KM317_12365 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit KM317_12365 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region KM317_12365 PF10531 SLBB domain KM317_12375 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit KM317_12380 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit KM317_12385 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit KM317_12390 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 KM317_12405 PF00121 Triosephosphate isomerase KM317_12415 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KM317_12415 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KM317_12415 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KM317_12415 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KM317_12420 PF17848 Acetyl-coA carboxylase zinc finger domain KM317_12420 PF01039 Carboxyl transferase domain KM317_12425 PF00290 Tryptophan synthase alpha chain KM317_12435 PF00291 Pyridoxal-phosphate dependent enzyme KM317_12440 PF03466 LysR substrate binding domain KM317_12440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM317_12450 PF05816 Toxic anion resistance protein (TelA) KM317_12455 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase KM317_12460 PF01416 tRNA pseudouridine synthase KM317_12470 PF02774 Semialdehyde dehydrogenase, dimerisation domain KM317_12470 PF01118 Semialdehyde dehydrogenase, NAD binding domain KM317_12475 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KM317_12475 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KM317_12480 PF01264 Chorismate synthase KM317_12485 PF05175 Methyltransferase small domain KM317_12490 PF02630 SCO1/SenC KM317_12495 PF02666 Phosphatidylserine decarboxylase KM317_12510 PF06737 Transglycosylase-like domain KM317_12515 PF05872 Bacterial protein of unknown function (DUF853) KM317_12520 PF00529 HlyD membrane-fusion protein of T1SS KM317_12525 PF00005 ABC transporter KM317_12525 PF03412 Peptidase C39 family KM317_12525 PF00664 ABC transporter transmembrane region KM317_12530 PF02951 Prokaryotic glutathione synthetase, N-terminal domain KM317_12530 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain KM317_12545 PF00293 NUDIX domain KM317_12560 PF01272 Transcription elongation factor, GreA/GreB, C-term KM317_12560 PF03449 Transcription elongation factor, N-terminal KM317_12565 PF01738 Dienelactone hydrolase family KM317_12580 PF06271 RDD family KM317_12585 PF00692 dUTPase KM317_12590 PF10609 NUBPL iron-transfer P-loop NTPase KM317_12595 PF07715 TonB-dependent Receptor Plug Domain KM317_12595 PF00593 TonB dependent receptor KM317_12600 PF07715 TonB-dependent Receptor Plug Domain KM317_12600 PF00593 TonB dependent receptor KM317_12605 PF13181 Tetratricopeptide repeat KM317_12620 PF05649 Peptidase family M13 KM317_12620 PF01431 Peptidase family M13 KM317_12650 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM317_12650 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM317_12655 PF01266 FAD dependent oxidoreductase KM317_12660 PF04235 Protein of unknown function (DUF418) KM317_12665 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KM317_12670 PF00877 NlpC/P60 family KM317_12675 PF00877 NlpC/P60 family KM317_12680 PF03061 Thioesterase superfamily KM317_12690 PF00375 Sodium:dicarboxylate symporter family KM317_12695 PF00245 Alkaline phosphatase KM317_12705 PF11734 TilS substrate C-terminal domain KM317_12705 PF09179 TilS substrate binding domain KM317_12705 PF01171 PP-loop family KM317_12710 PF02609 Exonuclease VII small subunit KM317_12715 PF00348 Polyprenyl synthetase KM317_12725 PF14521 Lysine-specific metallo-endopeptidase KM317_12740 PF01523 Putative modulator of DNA gyrase KM317_12745 PF04751 Protein of unknown function (DUF615) KM317_12750 PF01523 Putative modulator of DNA gyrase KM317_12760 PF10150 Ribonuclease E/G family KM317_12760 PF00575 S1 RNA binding domain KM317_12765 PF02545 Maf-like protein KM317_12770 PF04402 Protein of unknown function (DUF541) KM317_12780 PF07715 TonB-dependent Receptor Plug Domain KM317_12780 PF00593 TonB dependent receptor KM317_12785 PF02590 Predicted SPOUT methyltransferase KM317_12800 PF01467 Cytidylyltransferase-like KM317_12815 PF08264 Anticodon-binding domain of tRNA KM317_12815 PF00133 tRNA synthetases class I (I, L, M and V) KM317_12815 PF13603 Leucyl-tRNA synthetase, Domain 2 KM317_12825 PF00085 Thioredoxin KM317_12840 PF02592 Putative vitamin uptake transporter KM317_12850 PF02574 Homocysteine S-methyltransferase KM317_12860 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM317_12875 PF03377 TAL effector repeat KM317_12890 PF01588 Putative tRNA binding domain KM317_12890 PF09334 tRNA synthetases class I (M) KM317_12900 PF04060 Putative Fe-S cluster KM317_12915 PF04542 Sigma-70 region 2 KM317_12915 PF04545 Sigma-70, region 4 KM317_12960 PF01042 Endoribonuclease L-PSP KM317_12970 PF09924 Uncharacterised conserved protein (DUF2156) KM317_12970 PF03706 Lysylphosphatidylglycerol synthase TM region KM317_13000 PF07690 Major Facilitator Superfamily KM317_13005 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KM317_13015 PF03466 LysR substrate binding domain KM317_13015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM317_13020 PF00144 Beta-lactamase KM317_13025 PF07690 Major Facilitator Superfamily KM317_13030 PF08274 PhnA Zinc-Ribbon KM317_13030 PF03831 PhnA domain KM317_13035 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KM317_13045 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus KM317_13045 PF05175 Methyltransferase small domain KM317_13075 PF01258 Prokaryotic dksA/traR C4-type zinc finger KM317_13090 PF01863 Protein of unknown function DUF45 KM317_13110 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KM317_13110 PF00072 Response regulator receiver domain KM317_13110 PF01627 Hpt domain KM317_13110 PF00512 His Kinase A (phospho-acceptor) domain KM317_13110 PF00672 HAMP domain KM317_13110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM317_13115 PF01011 PQQ enzyme repeat KM317_13115 PF13360 PQQ-like domain KM317_13120 PF07729 FCD domain KM317_13120 PF00392 Bacterial regulatory proteins, gntR family KM317_13125 PF02929 Beta galactosidase small chain KM317_13125 PF16353 Domain of unknown function(DUF4981) KM317_13125 PF00703 Glycosyl hydrolases family 2 KM317_13125 PF02836 Glycosyl hydrolases family 2, TIM barrel domain KM317_13125 PF02837 Glycosyl hydrolases family 2, sugar binding domain KM317_13140 PF04820 Tryptophan halogenase KM317_13170 PF02310 B12 binding domain KM317_13170 PF01642 Methylmalonyl-CoA mutase KM317_13185 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KM317_13185 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KM317_13190 PF12951 Passenger-associated-transport-repeat KM317_13190 PF00082 Subtilase family KM317_13190 PF03797 Autotransporter beta-domain KM317_13195 PF02803 Thiolase, C-terminal domain KM317_13195 PF00108 Thiolase, N-terminal domain KM317_13205 PF00012 Hsp70 protein KM317_13220 PF00990 Diguanylate cyclase, GGDEF domain KM317_13220 PF00072 Response regulator receiver domain KM317_13235 PF01068 ATP dependent DNA ligase domain KM317_13235 PF04679 ATP dependent DNA ligase C terminal region KM317_13235 PF04675 DNA ligase N terminus KM317_13240 PF04679 ATP dependent DNA ligase C terminal region KM317_13240 PF01068 ATP dependent DNA ligase domain KM317_13240 PF04675 DNA ligase N terminus KM317_13245 PF00270 DEAD/DEAH box helicase KM317_13245 PF00271 Helicase conserved C-terminal domain KM317_13245 PF08494 DEAD/H associated KM317_13255 PF01494 FAD binding domain KM317_13260 PF00313 'Cold-shock' DNA-binding domain KM317_13265 PF01048 Phosphorylase superfamily KM317_13270 PF00156 Phosphoribosyl transferase domain KM317_13275 PF00933 Glycosyl hydrolase family 3 N terminal domain KM317_13280 PF01323 DSBA-like thioredoxin domain KM317_13285 PF01928 CYTH domain KM317_13290 PF05958 tRNA (Uracil-5-)-methyltransferase KM317_13295 PF02954 Bacterial regulatory protein, Fis family KM317_13295 PF00072 Response regulator receiver domain KM317_13295 PF00158 Sigma-54 interaction domain KM317_13300 PF02565 Recombination protein O C terminal KM317_13300 PF11967 Recombination protein O N terminal KM317_13305 PF07650 KH domain KM317_13305 PF01926 50S ribosome-binding GTPase KM317_13310 PF14622 Ribonuclease-III-like KM317_13310 PF00035 Double-stranded RNA binding motif KM317_13320 PF10502 Signal peptidase, peptidase S26 KM317_13325 PF00679 Elongation factor G C-terminus KM317_13325 PF00009 Elongation factor Tu GTP binding domain KM317_13325 PF03144 Elongation factor Tu domain 2 KM317_13325 PF06421 GTP-binding protein LepA C-terminus KM317_13330 PF13180 PDZ domain KM317_13340 PF04542 Sigma-70 region 2 KM317_13340 PF08281 Sigma-70, region 4 KM317_13345 PF00378 Enoyl-CoA hydratase/isomerase KM317_13345 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KM317_13345 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KM317_13360 PF01545 Cation efflux family KM317_13365 PF03601 Conserved hypothetical protein 698 KM317_13370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM317_13375 PF00005 ABC transporter KM317_13375 PF02687 FtsX-like permease family KM317_13375 PF12704 MacB-like periplasmic core domain KM317_13380 PF00005 ABC transporter KM317_13380 PF02687 FtsX-like permease family KM317_13380 PF12704 MacB-like periplasmic core domain KM317_13400 PF00664 ABC transporter transmembrane region KM317_13400 PF00005 ABC transporter KM317_13400 PF03412 Peptidase C39 family KM317_13445 PF01624 MutS domain I KM317_13445 PF05188 MutS domain II KM317_13445 PF05190 MutS family domain IV KM317_13445 PF00488 MutS domain V KM317_13445 PF05192 MutS domain III KM317_13450 PF13417 Glutathione S-transferase, N-terminal domain KM317_13460 PF00141 Peroxidase KM317_13465 PF01479 S4 domain KM317_13475 PF01554 MatE KM317_13480 PF01245 Ribosomal protein L19 KM317_13485 PF01746 tRNA (Guanine-1)-methyltransferase KM317_13490 PF05239 PRC-barrel domain KM317_13490 PF01782 RimM N-terminal domain KM317_13495 PF00886 Ribosomal protein S16 KM317_13505 PF03060 Nitronate monooxygenase KM317_13510 PF02978 Signal peptide binding domain KM317_13510 PF02881 SRP54-type protein, helical bundle domain KM317_13510 PF00448 SRP54-type protein, GTPase domain KM317_13520 PF01263 Aldose 1-epimerase KM317_13525 PF06964 Alpha-L-arabinofuranosidase C-terminal domain KM317_13535 PF00999 Sodium/hydrogen exchanger family KM317_13545 PF00043 Glutathione S-transferase, C-terminal domain KM317_13545 PF13417 Glutathione S-transferase, N-terminal domain KM317_13550 PF14508 Glycosyl-hydrolase 97 N-terminal KM317_13550 PF10566 Glycoside hydrolase 97 KM317_13550 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation KM317_13560 PF02653 Branched-chain amino acid transport system / permease component KM317_13565 PF02653 Branched-chain amino acid transport system / permease component KM317_13570 PF00005 ABC transporter KM317_13575 PF13407 Periplasmic binding protein domain KM317_13580 PF00171 Aldehyde dehydrogenase family KM317_13590 PF03466 LysR substrate binding domain KM317_13590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM317_13600 PF00920 Dehydratase family KM317_13620 PF00263 Bacterial type II and III secretion system protein KM317_13620 PF03958 Bacterial type II/III secretion system short domain KM317_13625 PF12833 Helix-turn-helix domain KM317_13640 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KM317_13640 PF02874 ATP synthase alpha/beta family, beta-barrel domain KM317_13640 PF18269 T3SS EscN ATPase C-terminal domain KM317_13645 PF06635 Nodulation protein NolV KM317_13655 PF01514 Secretory protein of YscJ/FliF family KM317_13670 PF01312 FlhB HrpN YscU SpaS Family KM317_13675 PF00771 FHIPEP family KM317_13690 PF00813 FliP family KM317_13695 PF01313 Bacterial export proteins, family 3 KM317_13730 PF00486 Transcriptional regulatory protein, C terminal KM317_13730 PF00072 Response regulator receiver domain KM317_13755 PF04542 Sigma-70 region 2 KM317_13755 PF08281 Sigma-70, region 4 KM317_13765 PF07715 TonB-dependent Receptor Plug Domain KM317_13765 PF07660 Secretin and TonB N terminus short domain KM317_13765 PF00593 TonB dependent receptor KM317_13770 PF00328 Histidine phosphatase superfamily (branch 2) KM317_13780 PF05656 Protein of unknown function (DUF805) KM317_13785 PF18073 Rubredoxin metal binding domain KM317_13790 PF00155 Aminotransferase class I and II KM317_13800 PF03626 Prokaryotic Cytochrome C oxidase subunit IV KM317_13805 PF00510 Cytochrome c oxidase subunit III KM317_13810 PF00115 Cytochrome C and Quinol oxidase polypeptide I KM317_13815 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KM317_13815 PF06481 COX Aromatic Rich Motif KM317_13840 PF02401 LytB protein KM317_13845 PF01252 Signal peptidase (SPase) II KM317_13850 PF08264 Anticodon-binding domain of tRNA KM317_13850 PF00133 tRNA synthetases class I (I, L, M and V) KM317_13850 PF06827 Zinc finger found in FPG and IleRS KM317_13855 PF06574 FAD synthetase KM317_13855 PF01687 Riboflavin kinase KM317_13860 PF03023 Lipid II flippase MurJ KM317_13865 PF01649 Ribosomal protein S20 KM317_13870 PF01018 GTP1/OBG KM317_13870 PF01926 50S ribosome-binding GTPase KM317_13875 PF01016 Ribosomal L27 protein KM317_13880 PF00829 Ribosomal prokaryotic L21 protein KM317_13885 PF17760 UvrA interaction domain KM317_13885 PF00005 ABC transporter KM317_13885 PF17755 UvrA DNA-binding domain KM317_13900 PF00378 Enoyl-CoA hydratase/isomerase KM317_13930 PF02222 ATP-grasp domain KM317_13930 PF01370 NAD dependent epimerase/dehydratase family KM317_13960 PF13026 Protein of unknown function (DUF3887) KM317_13960 PF12146 Serine aminopeptidase, S33 KM317_13985 PF13291 ACT domain KM317_13985 PF04607 Region found in RelA / SpoT proteins KM317_13985 PF02824 TGS domain KM317_14000 PF12706 Beta-lactamase superfamily domain KM317_14005 PF03070 TENA/THI-4/PQQC family KM317_14010 PF05402 Coenzyme PQQ synthesis protein D (PqqD) KM317_14015 PF04055 Radical SAM superfamily KM317_14015 PF13186 Iron-sulfur cluster-binding domain KM317_14025 PF00654 Voltage gated chloride channel KM317_14030 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold KM317_14030 PF04408 Helicase associated domain (HA2) KM317_14030 PF11898 Domain of unknown function (DUF3418) KM317_14030 PF00270 DEAD/DEAH box helicase KM317_14030 PF00271 Helicase conserved C-terminal domain KM317_14035 PF00210 Ferritin-like domain KM317_14045 PF09382 RQC domain KM317_14045 PF00570 HRDC domain KM317_14045 PF00271 Helicase conserved C-terminal domain KM317_14045 PF16124 RecQ zinc-binding KM317_14045 PF00270 DEAD/DEAH box helicase KM317_14065 PF06508 Queuosine biosynthesis protein QueC KM317_14070 PF04055 Radical SAM superfamily KM317_14080 PF00691 OmpA family KM317_14085 PF07676 WD40-like Beta Propeller Repeat KM317_14085 PF04052 TolB amino-terminal domain KM317_14095 PF02472 Biopolymer transport protein ExbD/TolR KM317_14100 PF01618 MotA/TolQ/ExbB proton channel family KM317_14105 PF03061 Thioesterase superfamily KM317_14110 PF05496 Holliday junction DNA helicase RuvB P-loop domain KM317_14110 PF17864 RuvB AAA lid domain KM317_14110 PF05491 RuvB C-terminal winged helix domain KM317_14115 PF02705 K+ potassium transporter KM317_14120 PF07499 RuvA, C-terminal domain KM317_14120 PF01330 RuvA N terminal domain KM317_14125 PF02075 Crossover junction endodeoxyribonuclease RuvC KM317_14130 PF01709 Transcriptional regulator KM317_14150 PF01336 OB-fold nucleic acid binding domain KM317_14150 PF02938 GAD domain KM317_14150 PF00152 tRNA synthetases class II (D, K and N) KM317_14170 PF07715 TonB-dependent Receptor Plug Domain KM317_14170 PF00593 TonB dependent receptor KM317_14175 PF05506 Domain of unknown function (DUF756) KM317_14175 PF04185 Phosphoesterase family KM317_14180 PF07859 alpha/beta hydrolase fold KM317_14180 PF13472 GDSL-like Lipase/Acylhydrolase family KM317_14190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM317_14190 PF03466 LysR substrate binding domain KM317_14205 PF00005 ABC transporter KM317_14205 PF12848 ABC transporter KM317_14210 PF07715 TonB-dependent Receptor Plug Domain KM317_14210 PF00593 TonB dependent receptor KM317_14215 PF07715 TonB-dependent Receptor Plug Domain KM317_14215 PF00593 TonB dependent receptor KM317_14240 PF07715 TonB-dependent Receptor Plug Domain KM317_14240 PF00593 TonB dependent receptor KM317_14255 PF00999 Sodium/hydrogen exchanger family KM317_14255 PF02254 TrkA-N domain KM317_14265 PF00593 TonB dependent receptor KM317_14265 PF07660 Secretin and TonB N terminus short domain KM317_14265 PF07715 TonB-dependent Receptor Plug Domain KM317_14275 PF06276 Ferric iron reductase FhuF-like transporter KM317_14275 PF04183 IucA / IucC family KM317_14280 PF07690 Major Facilitator Superfamily KM317_14285 PF06276 Ferric iron reductase FhuF-like transporter KM317_14285 PF04183 IucA / IucC family KM317_14290 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KM317_14290 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KM317_14295 PF07769 psiF repeat KM317_14300 PF01053 Cys/Met metabolism PLP-dependent enzyme KM317_14315 PF10431 C-terminal, D2-small domain, of ClpB protein KM317_14315 PF02861 Clp amino terminal domain, pathogenicity island component KM317_14315 PF17871 AAA lid domain KM317_14315 PF07724 AAA domain (Cdc48 subfamily) KM317_14315 PF00004 ATPase family associated with various cellular activities (AAA) KM317_14340 PF00583 Acetyltransferase (GNAT) family KM317_14350 PF07715 TonB-dependent Receptor Plug Domain KM317_14350 PF00593 TonB dependent receptor KM317_14360 PF02358 Trehalose-phosphatase KM317_14365 PF00723 Glycosyl hydrolases family 15 KM317_14370 PF00982 Glycosyltransferase family 20 KM317_14380 PF01011 PQQ enzyme repeat KM317_14385 PF00672 HAMP domain KM317_14385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM317_14385 PF02203 Tar ligand binding domain homologue KM317_14390 PF02578 Multi-copper polyphenol oxidoreductase laccase KM317_14395 PF00849 RNA pseudouridylate synthase KM317_14400 PF13525 Outer membrane lipoprotein KM317_14410 PF00005 ABC transporter KM317_14415 PF00528 Binding-protein-dependent transport system inner membrane component KM317_14425 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KM317_14430 PF12867 DinB superfamily KM317_14430 PF03781 Sulfatase-modifying factor enzyme 1 KM317_14440 PF00795 Carbon-nitrogen hydrolase KM317_14440 PF02540 NAD synthase KM317_14445 PF01011 PQQ enzyme repeat KM317_14450 PF02629 CoA binding domain KM317_14450 PF00549 CoA-ligase KM317_14455 PF00549 CoA-ligase KM317_14455 PF08442 ATP-grasp domain KM317_14460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM317_14460 PF00512 His Kinase A (phospho-acceptor) domain KM317_14465 PF02954 Bacterial regulatory protein, Fis family KM317_14465 PF00072 Response regulator receiver domain KM317_14465 PF00158 Sigma-54 interaction domain KM317_14470 PF05973 Phage derived protein Gp49-like (DUF891) KM317_14475 PF01381 Helix-turn-helix KM317_14480 PF00437 Type II/IV secretion system protein KM317_14480 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KM317_14490 PF00114 Pilin (bacterial filament) KM317_14490 PF07963 Prokaryotic N-terminal methylation motif KM317_14495 PF00482 Type II secretion system (T2SS), protein F KM317_14500 PF01478 Type IV leader peptidase family KM317_14500 PF06750 Bacterial Peptidase A24 N-terminal domain KM317_14505 PF01121 Dephospho-CoA kinase KM317_14510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM317_14510 PF00512 His Kinase A (phospho-acceptor) domain KM317_14510 PF00989 PAS fold KM317_14510 PF11808 Phosphate regulon sensor protein PhoR KM317_14515 PF00072 Response regulator receiver domain KM317_14515 PF00486 Transcriptional regulatory protein, C terminal KM317_14525 PF18030 RimK PreATP-grasp domain KM317_14525 PF08443 RimK-like ATP-grasp domain KM317_14530 PF07660 Secretin and TonB N terminus short domain KM317_14530 PF00593 TonB dependent receptor KM317_14530 PF07715 TonB-dependent Receptor Plug Domain KM317_14535 PF05506 Domain of unknown function (DUF756) KM317_14535 PF04185 Phosphoesterase family KM317_14555 PF00266 Aminotransferase class-V KM317_14565 PF01053 Cys/Met metabolism PLP-dependent enzyme KM317_14600 PF02597 ThiS family KM317_14600 PF05690 Thiazole biosynthesis protein ThiG KM317_14605 PF05690 Thiazole biosynthesis protein ThiG KM317_14610 PF02390 Putative methyltransferase KM317_14615 PF02080 TrkA-C domain KM317_14615 PF03600 Citrate transporter KM317_14630 PF01557 Fumarylacetoacetate (FAA) hydrolase family KM317_14635 PF01741 Large-conductance mechanosensitive channel, MscL KM317_14645 PF00356 Bacterial regulatory proteins, lacI family KM317_14655 PF08032 RNA 2'-O ribose methyltransferase substrate binding KM317_14655 PF00588 SpoU rRNA Methylase family KM317_14665 PF01235 Sodium:alanine symporter family KM317_14690 PF00534 Glycosyl transferases group 1 KM317_14690 PF13439 Glycosyltransferase Family 4 KM317_14695 PF00672 HAMP domain KM317_14695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM317_14695 PF02203 Tar ligand binding domain homologue KM317_14700 PF00009 Elongation factor Tu GTP binding domain KM317_14705 PF01507 Phosphoadenosine phosphosulfate reductase family KM317_14710 PF00667 FAD binding domain KM317_14710 PF00175 Oxidoreductase NAD-binding domain KM317_14710 PF00258 Flavodoxin KM317_14715 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KM317_14715 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KM317_14720 PF01507 Phosphoadenosine phosphosulfate reductase family KM317_14750 PF03960 ArsC family KM317_14755 PF00672 HAMP domain KM317_14755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM317_14755 PF00512 His Kinase A (phospho-acceptor) domain KM317_14755 PF01627 Hpt domain KM317_14755 PF00072 Response regulator receiver domain KM317_14770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM317_14770 PF03466 LysR substrate binding domain KM317_14775 PF10414 Sirohaem synthase dimerisation region KM317_14775 PF14824 Sirohaem biosynthesis protein central KM317_14775 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KM317_14780 PF00291 Pyridoxal-phosphate dependent enzyme KM317_14805 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain KM317_14805 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase KM317_14810 PF03450 CO dehydrogenase flavoprotein C-terminal domain KM317_14810 PF00941 FAD binding domain in molybdopterin dehydrogenase KM317_14815 PF00576 HIUase/Transthyretin family KM317_14820 PF13454 FAD-NAD(P)-binding KM317_14840 PF00266 Aminotransferase class-V KM317_14845 PF07687 Peptidase dimerisation domain KM317_14845 PF01546 Peptidase family M20/M25/M40 KM317_14850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM317_14850 PF03466 LysR substrate binding domain KM317_14865 PF01425 Amidase KM317_14870 PF01156 Inosine-uridine preferring nucleoside hydrolase KM317_14885 PF01661 Macro domain KM317_14890 PF00274 Fructose-bisphosphate aldolase class-I KM317_14895 PF02887 Pyruvate kinase, alpha/beta domain KM317_14895 PF00224 Pyruvate kinase, barrel domain KM317_14900 PF13419 Haloacid dehalogenase-like hydrolase KM317_14905 PF00162 Phosphoglycerate kinase KM317_14920 PF00672 HAMP domain KM317_14920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM317_14940 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KM317_14940 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KM317_14945 PF03922 OmpW family KM317_14950 PF03922 OmpW family KM317_14965 PF01022 Bacterial regulatory protein, arsR family KM317_14970 PF00753 Metallo-beta-lactamase superfamily KM317_14980 PF00528 Binding-protein-dependent transport system inner membrane component KM317_14985 PF00005 ABC transporter KM317_14985 PF03459 TOBE domain KM317_15005 PF03965 Penicillinase repressor KM317_15025 PF01476 LysM domain KM317_15025 PF03734 L,D-transpeptidase catalytic domain KM317_15030 PF04225 Opacity-associated protein A LysM-like domain KM317_15030 PF01551 Peptidase family M23 KM317_15060 PF00456 Transketolase, thiamine diphosphate binding domain KM317_15060 PF02780 Transketolase, C-terminal domain KM317_15060 PF02779 Transketolase, pyrimidine binding domain KM317_15065 PF00375 Sodium:dicarboxylate symporter family KM317_15080 PF13519 von Willebrand factor type A domain KM317_15090 PF01882 Protein of unknown function DUF58 KM317_15095 PF07726 ATPase family associated with various cellular activities (AAA) KM317_15095 PF17863 AAA lid domain KM317_15100 PF11741 AMIN domain KM317_15100 PF03958 Bacterial type II/III secretion system short domain KM317_15100 PF00263 Bacterial type II and III secretion system protein KM317_15100 PF07660 Secretin and TonB N terminus short domain KM317_15105 PF04351 Pilus assembly protein, PilP KM317_15110 PF04350 Pilus assembly protein, PilO KM317_15120 PF11104 Type IV pilus assembly protein PilM; KM317_15125 PF00912 Transglycosylase KM317_15125 PF00905 Penicillin binding protein transpeptidase domain KM317_15125 PF17092 Penicillin-binding protein OB-like domain KM317_15145 PF00285 Citrate synthase, C-terminal domain KM317_15150 PF01197 Ribosomal protein L31 KM317_15155 PF01156 Inosine-uridine preferring nucleoside hydrolase KM317_15160 PF00270 DEAD/DEAH box helicase KM317_15160 PF00271 Helicase conserved C-terminal domain KM317_15160 PF17191 RecG wedge domain KM317_15165 PF01042 Endoribonuclease L-PSP KM317_15185 PF02391 MoaE protein KM317_15190 PF02597 ThiS family KM317_15195 PF01967 MoaC family KM317_15205 PF04055 Radical SAM superfamily KM317_15205 PF06463 Molybdenum Cofactor Synthesis C KM317_15210 PF12706 Beta-lactamase superfamily domain KM317_15220 PF01075 Glycosyltransferase family 9 (heptosyltransferase) KM317_15245 PF00929 Exonuclease KM317_15250 PF00075 RNase H KM317_15260 PF00753 Metallo-beta-lactamase superfamily KM317_15260 PF16123 Hydroxyacylglutathione hydrolase C-terminus KM317_15265 PF01476 LysM domain KM317_15265 PF05257 CHAP domain KM317_15290 PF00216 Bacterial DNA-binding protein KM317_15295 PF05362 Lon protease (S16) C-terminal proteolytic domain KM317_15295 PF00004 ATPase family associated with various cellular activities (AAA) KM317_15295 PF02190 ATP-dependent protease La (LON) substrate-binding domain KM317_15300 PF07724 AAA domain (Cdc48 subfamily) KM317_15300 PF10431 C-terminal, D2-small domain, of ClpB protein KM317_15300 PF06689 ClpX C4-type zinc finger KM317_15305 PF00574 Clp protease KM317_15310 PF05698 Bacterial trigger factor protein (TF) C-terminus KM317_15310 PF05697 Bacterial trigger factor protein (TF) KM317_15350 PF18324 Hypothetical protein TT1725 KM317_15350 PF00180 Isocitrate/isopropylmalate dehydrogenase KM317_15360 PF00462 Glutaredoxin KM317_15365 PF13181 Tetratricopeptide repeat KM317_15365 PF01435 Peptidase family M48 KM317_15370 PF00072 Response regulator receiver domain KM317_15370 PF00486 Transcriptional regulatory protein, C terminal KM317_15375 PF00512 His Kinase A (phospho-acceptor) domain KM317_15375 PF00989 PAS fold KM317_15375 PF11808 Phosphate regulon sensor protein PhoR KM317_15375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM317_15380 PF02503 Polyphosphate kinase middle domain KM317_15380 PF13090 Polyphosphate kinase C-terminal domain 2 KM317_15380 PF17941 Polyphosphate kinase C-terminal domain 1 KM317_15380 PF13089 Polyphosphate kinase N-terminal domain KM317_15385 PF02541 Ppx/GppA phosphatase family KM317_15390 PF13439 Glycosyltransferase Family 4 KM317_15390 PF00534 Glycosyl transferases group 1 KM317_15395 PF01569 PAP2 superfamily KM317_15400 PF00149 Calcineurin-like phosphoesterase KM317_15415 PF04305 Protein of unknown function (DUF455) KM317_15420 PF00156 Phosphoribosyl transferase domain KM317_15435 PF02875 Mur ligase family, glutamate ligase domain KM317_15435 PF08245 Mur ligase middle domain KM317_15440 PF00300 Histidine phosphatase superfamily (branch 1) KM317_15445 PF10459 Peptidase S46 KM317_15450 PF00107 Zinc-binding dehydrogenase KM317_15450 PF08240 Alcohol dehydrogenase GroES-like domain KM317_15460 PF12857 TOBE-like domain KM317_15460 PF17850 CysA C-terminal regulatory domain KM317_15460 PF00005 ABC transporter KM317_15465 PF00528 Binding-protein-dependent transport system inner membrane component KM317_15470 PF00528 Binding-protein-dependent transport system inner membrane component KM317_15480 PF00155 Aminotransferase class I and II KM317_15485 PF00849 RNA pseudouridylate synthase KM317_15495 PF00223 Photosystem I psaA/psaB protein KM317_15495 PF00691 OmpA family KM317_15500 PF03466 LysR substrate binding domain KM317_15500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM317_15505 PF07690 Major Facilitator Superfamily KM317_15515 PF00248 Aldo/keto reductase family KM317_15520 PF00107 Zinc-binding dehydrogenase KM317_15520 PF08240 Alcohol dehydrogenase GroES-like domain KM317_15525 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM317_15525 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KM317_15550 PF03009 Glycerophosphoryl diester phosphodiesterase family KM317_15570 PF02798 Glutathione S-transferase, N-terminal domain KM317_15570 PF00043 Glutathione S-transferase, C-terminal domain KM317_15575 PF13193 AMP-binding enzyme C-terminal domain KM317_15575 PF16177 Acetyl-coenzyme A synthetase N-terminus KM317_15575 PF00501 AMP-binding enzyme KM317_15585 PF00056 lactate/malate dehydrogenase, NAD binding domain KM317_15585 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KM317_15595 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KM317_15600 PF00679 Elongation factor G C-terminus KM317_15600 PF00009 Elongation factor Tu GTP binding domain KM317_15600 PF03144 Elongation factor Tu domain 2 KM317_15620 PF01474 Class-II DAHP synthetase family KM317_15630 PF02600 Disulfide bond formation protein DsbB KM317_15635 PF01196 Ribosomal protein L17 KM317_15640 PF01000 RNA polymerase Rpb3/RpoA insert domain KM317_15640 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KM317_15640 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KM317_15645 PF00163 Ribosomal protein S4/S9 N-terminal domain KM317_15645 PF01479 S4 domain KM317_15650 PF00411 Ribosomal protein S11 KM317_15655 PF00416 Ribosomal protein S13/S18 KM317_15660 PF00344 SecY translocase KM317_15665 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KM317_15670 PF00327 Ribosomal protein L30p/L7e KM317_15675 PF00333 Ribosomal protein S5, N-terminal domain KM317_15675 PF03719 Ribosomal protein S5, C-terminal domain KM317_15680 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast KM317_15685 PF00347 Ribosomal protein L6 KM317_15690 PF00410 Ribosomal protein S8 KM317_15695 PF00253 Ribosomal protein S14p/S29e KM317_15700 PF00281 Ribosomal protein L5 KM317_15700 PF00673 ribosomal L5P family C-terminus KM317_15705 PF00467 KOW motif KM317_15705 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KM317_15710 PF00238 Ribosomal protein L14p/L23e KM317_15715 PF00366 Ribosomal protein S17 KM317_15720 PF00831 Ribosomal L29 protein KM317_15725 PF00252 Ribosomal protein L16p/L10e KM317_15730 PF07650 KH domain KM317_15730 PF00189 Ribosomal protein S3, C-terminal domain KM317_15735 PF00237 Ribosomal protein L22p/L17e KM317_15740 PF00203 Ribosomal protein S19 KM317_15745 PF00181 Ribosomal Proteins L2, RNA binding domain KM317_15745 PF03947 Ribosomal Proteins L2, C-terminal domain KM317_15750 PF00276 Ribosomal protein L23 KM317_15755 PF00573 Ribosomal protein L4/L1 family KM317_15760 PF00297 Ribosomal protein L3 KM317_15765 PF00338 Ribosomal protein S10p/S20e KM317_15770 PF00009 Elongation factor Tu GTP binding domain KM317_15770 PF03144 Elongation factor Tu domain 2 KM317_15770 PF03143 Elongation factor Tu C-terminal domain KM317_15775 PF00679 Elongation factor G C-terminus KM317_15775 PF14492 Elongation Factor G, domain II KM317_15775 PF00009 Elongation factor Tu GTP binding domain KM317_15775 PF03144 Elongation factor Tu domain 2 KM317_15775 PF03764 Elongation factor G, domain IV KM317_15780 PF00177 Ribosomal protein S7p/S5e KM317_15785 PF00164 Ribosomal protein S12/S23 KM317_15790 PF04997 RNA polymerase Rpb1, domain 1 KM317_15790 PF00623 RNA polymerase Rpb1, domain 2 KM317_15790 PF04983 RNA polymerase Rpb1, domain 3 KM317_15790 PF05000 RNA polymerase Rpb1, domain 4 KM317_15790 PF04998 RNA polymerase Rpb1, domain 5 KM317_15795 PF10385 RNA polymerase beta subunit external 1 domain KM317_15795 PF04563 RNA polymerase beta subunit KM317_15795 PF04561 RNA polymerase Rpb2, domain 2 KM317_15795 PF00562 RNA polymerase Rpb2, domain 6 KM317_15795 PF04560 RNA polymerase Rpb2, domain 7 KM317_15795 PF04565 RNA polymerase Rpb2, domain 3 KM317_15800 PF00542 Ribosomal protein L7/L12 C-terminal domain KM317_15800 PF16320 Ribosomal protein L7/L12 dimerisation domain KM317_15805 PF00466 Ribosomal protein L10 KM317_15810 PF00687 Ribosomal protein L1p/L10e family KM317_15815 PF03946 Ribosomal protein L11, N-terminal domain KM317_15815 PF00298 Ribosomal protein L11, RNA binding domain KM317_15820 PF00467 KOW motif KM317_15820 PF02357 Transcription termination factor nusG KM317_15825 PF00584 SecE/Sec61-gamma subunits of protein translocation complex KM317_15835 PF00009 Elongation factor Tu GTP binding domain KM317_15835 PF03143 Elongation factor Tu C-terminal domain KM317_15835 PF03144 Elongation factor Tu domain 2 KM317_15855 PF01926 50S ribosome-binding GTPase KM317_15855 PF06071 Protein of unknown function (DUF933) KM317_15860 PF01195 Peptidyl-tRNA hydrolase KM317_15865 PF01386 Ribosomal L25p family KM317_15865 PF14693 Ribosomal protein TL5, C-terminal domain KM317_15870 PF14572 Phosphoribosyl synthetase-associated domain KM317_15870 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KM317_15880 PF08544 GHMP kinases C terminal KM317_15880 PF00288 GHMP kinases N terminal domain KM317_15885 PF03550 Outer membrane lipoprotein LolB KM317_15895 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain KM317_15895 PF01488 Shikimate / quinate 5-dehydrogenase KM317_15895 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain KM317_15900 PF03462 PCRF domain KM317_15900 PF00472 RF-1 domain KM317_15915 PF00553 Cellulose binding domain KM317_15915 PF00041 Fibronectin type III domain KM317_15915 PF01341 Glycosyl hydrolases family 6 KM317_15920 PF00994 Probable molybdopterin binding domain KM317_15930 PF03976 Polyphosphate kinase 2 (PPK2) KM317_15935 PF00708 Acylphosphatase KM317_15940 PF08534 Redoxin KM317_15945 PF03631 Virulence factor BrkB KM317_15950 PF03358 NADPH-dependent FMN reductase KM317_15965 PF04073 Aminoacyl-tRNA editing domain KM317_15970 PF00082 Subtilase family KM317_15970 PF04151 Bacterial pre-peptidase C-terminal domain KM317_15975 PF00082 Subtilase family KM317_15975 PF04151 Bacterial pre-peptidase C-terminal domain KM317_15980 PF01063 Amino-transferase class IV KM317_15995 PF02233 NAD(P) transhydrogenase beta subunit KM317_16000 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch KM317_16020 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KM317_16020 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KM317_16040 PF01367 5'-3' exonuclease, C-terminal SAM fold KM317_16040 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KM317_16040 PF00476 DNA polymerase family A KM317_16040 PF01612 3'-5' exonuclease KM317_16045 PF00293 NUDIX domain KM317_16060 PF00561 alpha/beta hydrolase fold KM317_16075 PF05175 Methyltransferase small domain KM317_16075 PF17827 PrmC N-terminal domain KM317_16080 PF00578 AhpC/TSA family KM317_16080 PF10417 C-terminal domain of 1-Cys peroxiredoxin KM317_16085 PF13192 Thioredoxin domain KM317_16085 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM317_16090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM317_16090 PF03466 LysR substrate binding domain KM317_16100 PF14760 Rnk N-terminus KM317_16100 PF01272 Transcription elongation factor, GreA/GreB, C-term KM317_16105 PF00923 Transaldolase/Fructose-6-phosphate aldolase KM317_16110 PF01625 Peptide methionine sulfoxide reductase KM317_16120 PF00072 Response regulator receiver domain KM317_16120 PF00196 Bacterial regulatory proteins, luxR family KM317_16125 PF00512 His Kinase A (phospho-acceptor) domain KM317_16125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM317_16125 PF00672 HAMP domain KM317_16125 PF00072 Response regulator receiver domain KM317_16125 PF01627 Hpt domain KM317_16125 PF17149 Periplasmic sensor domain found in signal transduction proteins KM317_16130 PF00990 Diguanylate cyclase, GGDEF domain KM317_16130 PF00072 Response regulator receiver domain KM317_16145 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain KM317_16145 PF00749 tRNA synthetases class I (E and Q), catalytic domain KM317_16150 PF00892 EamA-like transporter family KM317_16170 PF01728 FtsJ-like methyltransferase KM317_16170 PF18125 RlmM ferredoxin-like domain KM317_16175 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KM317_16175 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KM317_16195 PF01494 FAD binding domain KM317_16200 PF01494 FAD binding domain KM317_16210 PF01923 Cobalamin adenosyltransferase KM317_16215 PF00850 Histone deacetylase domain KM317_16220 PF04453 LPS transport system D KM317_16220 PF03968 OstA-like protein KM317_16225 PF09312 SurA N-terminal domain KM317_16225 PF00639 PPIC-type PPIASE domain KM317_16230 PF04166 Pyridoxal phosphate biosynthetic protein PdxA KM317_16235 PF00398 Ribosomal RNA adenine dimethylase KM317_16240 PF04379 ApaG domain KM317_16245 PF00149 Calcineurin-like phosphoesterase KM317_16250 PF00186 Dihydrofolate reductase KM317_16255 PF00303 Thymidylate synthase KM317_16260 PF01790 Prolipoprotein diacylglyceryl transferase KM317_16275 PF04011 LemA family KM317_16280 PF03741 Integral membrane protein TerC family KM317_16285 PF01219 Prokaryotic diacylglycerol kinase KM317_16295 PF08521 Two-component sensor kinase N-terminal KM317_16295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM317_16295 PF00512 His Kinase A (phospho-acceptor) domain KM317_16300 PF00072 Response regulator receiver domain KM317_16300 PF00486 Transcriptional regulatory protein, C terminal KM317_16305 PF13472 GDSL-like Lipase/Acylhydrolase family KM317_16310 PF00005 ABC transporter KM317_16335 PF07715 TonB-dependent Receptor Plug Domain KM317_16335 PF00593 TonB dependent receptor KM317_16345 PF00248 Aldo/keto reductase family KM317_16350 PF07662 Na+ dependent nucleoside transporter C-terminus KM317_16350 PF07670 Nucleoside recognition KM317_16350 PF01773 Na+ dependent nucleoside transporter N-terminus KM317_16355 PF00294 pfkB family carbohydrate kinase KM317_16355 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) KM317_16370 PF01207 Dihydrouridine synthase (Dus) KM317_16390 PF02773 S-adenosylmethionine synthetase, C-terminal domain KM317_16390 PF02772 S-adenosylmethionine synthetase, central domain KM317_16390 PF00438 S-adenosylmethionine synthetase, N-terminal domain KM317_16395 PF00328 Histidine phosphatase superfamily (branch 2) KM317_16420 PF00311 Phosphoenolpyruvate carboxylase KM317_16425 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KM317_16425 PF05221 S-adenosyl-L-homocysteine hydrolase KM317_16460 PF02219 Methylenetetrahydrofolate reductase KM317_16470 PF00293 NUDIX domain KM317_16480 PF07516 SecA Wing and Scaffold domain KM317_16480 PF07517 SecA DEAD-like domain KM317_16480 PF02810 SEC-C motif KM317_16480 PF01043 SecA preprotein cross-linking domain KM317_16485 PF08525 Opacity-associated protein A N-terminal motif KM317_16485 PF01551 Peptidase family M23 KM317_16485 PF01476 LysM domain KM317_16495 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase KM317_16500 PF12327 FtsZ family, C-terminal domain KM317_16500 PF00091 Tubulin/FtsZ family, GTPase domain KM317_16505 PF02491 SHS2 domain inserted in FTSA KM317_16510 PF03799 Cell division protein FtsQ KM317_16510 PF08478 POTRA domain, FtsQ-type KM317_16515 PF07478 D-ala D-ala ligase C-terminus KM317_16515 PF01820 D-ala D-ala ligase N-terminus KM317_16520 PF02875 Mur ligase family, glutamate ligase domain KM317_16520 PF08245 Mur ligase middle domain KM317_16520 PF01225 Mur ligase family, catalytic domain KM317_16525 PF04101 Glycosyltransferase family 28 C-terminal domain KM317_16525 PF03033 Glycosyltransferase family 28 N-terminal domain KM317_16530 PF01098 Cell cycle protein KM317_16535 PF00953 Glycosyl transferase family 4 KM317_16540 PF01225 Mur ligase family, catalytic domain KM317_16540 PF02875 Mur ligase family, glutamate ligase domain KM317_16540 PF08245 Mur ligase middle domain KM317_16545 PF08245 Mur ligase middle domain KM317_16545 PF02875 Mur ligase family, glutamate ligase domain KM317_16545 PF01225 Mur ligase family, catalytic domain KM317_16550 PF03717 Penicillin-binding Protein dimerisation domain KM317_16550 PF00905 Penicillin binding protein transpeptidase domain KM317_16555 PF04999 Cell division protein FtsL KM317_16560 PF01795 MraW methylase family KM317_16565 PF02381 MraZ protein, putative antitoxin-like KM317_16590 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KM317_16600 PF02021 Uncharacterised protein family UPF0102 KM317_16605 PF04307 LexA-binding, inner membrane-associated putative hydrolase KM317_16610 PF02913 FAD linked oxidases, C-terminal domain KM317_16610 PF01565 FAD binding domain KM317_16630 PF00486 Transcriptional regulatory protein, C terminal KM317_16630 PF00072 Response regulator receiver domain KM317_16635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM317_16635 PF13492 GAF domain KM317_16635 PF13493 Domain of unknown function (DUF4118) KM317_16635 PF00512 His Kinase A (phospho-acceptor) domain KM317_16635 PF02702 Osmosensitive K+ channel His kinase sensor domain KM317_16640 PF02669 K+-transporting ATPase, c chain KM317_16650 PF03814 Potassium-transporting ATPase A subunit KM317_16675 PF00586 AIR synthase related protein, N-terminal domain KM317_16675 PF02769 AIR synthase related protein, C-terminal domain KM317_16680 PF01029 NusB family KM317_16685 PF00885 6,7-dimethyl-8-ribityllumazine synthase KM317_16690 PF00925 GTP cyclohydrolase II KM317_16690 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KM317_16695 PF00677 Lumazine binding domain KM317_16700 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM317_16700 PF01872 RibD C-terminal domain KM317_16710 PF03477 ATP cone domain KM317_16715 PF00464 Serine hydroxymethyltransferase KM317_16765 PF07690 Major Facilitator Superfamily KM317_16770 PF00005 ABC transporter KM317_16770 PF12848 ABC transporter KM317_16775 PF01327 Polypeptide deformylase KM317_16785 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM317_16785 PF02770 Acyl-CoA dehydrogenase, middle domain KM317_16785 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM317_16795 PF00501 AMP-binding enzyme KM317_16795 PF13193 AMP-binding enzyme C-terminal domain KM317_16800 PF00550 Phosphopantetheine attachment site KM317_16805 PF03062 MBOAT, membrane-bound O-acyltransferase family KM317_16810 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX KM317_16815 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX KM317_16825 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KM317_16825 PF13632 Glycosyl transferase family group 2 KM317_16835 PF02350 UDP-N-acetylglucosamine 2-epimerase KM317_16840 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KM317_16840 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain KM317_16880 PF07715 TonB-dependent Receptor Plug Domain KM317_16880 PF00593 TonB dependent receptor KM317_16890 PF07702 UTRA domain KM317_16890 PF00392 Bacterial regulatory proteins, gntR family KM317_16900 PF00263 Bacterial type II and III secretion system protein KM317_16900 PF03958 Bacterial type II/III secretion system short domain KM317_16910 PF10741 Type II secretion system (T2SS), protein M subtype b KM317_16915 PF05137 Fimbrial assembly protein (PilN) KM317_16920 PF03934 Type II secretion system (T2SS), protein K KM317_16930 PF07963 Prokaryotic N-terminal methylation motif KM317_16935 PF12019 Type II transport protein GspH KM317_16940 PF08334 Type II secretion system (T2SS), protein G KM317_16945 PF00482 Type II secretion system (T2SS), protein F KM317_16950 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KM317_16950 PF00437 Type II/IV secretion system protein KM317_16965 PF13018 Extended Signal Peptide of Type V secretion system KM317_16965 PF03895 YadA-like membrane anchor domain KM317_16965 PF05658 Head domain of trimeric autotransporter adhesin KM317_16965 PF05662 Coiled stalk of trimeric autotransporter adhesin KM317_16970 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain KM317_16970 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal KM317_16970 PF02769 AIR synthase related protein, C-terminal domain KM317_16975 PF10411 Disulfide bond isomerase protein N-terminus KM317_16975 PF13098 Thioredoxin-like domain KM317_16980 PF02899 Phage integrase, N-terminal SAM-like domain KM317_16980 PF00589 Phage integrase family KM317_17005 PF02789 Cytosol aminopeptidase family, N-terminal domain KM317_17005 PF00883 Cytosol aminopeptidase family, catalytic domain KM317_17015 PF10458 Valyl tRNA synthetase tRNA binding arm KM317_17015 PF08264 Anticodon-binding domain of tRNA KM317_17015 PF00133 tRNA synthetases class I (I, L, M and V) KM317_17025 PF00544 Pectate lyase KM317_17040 PF01066 CDP-alcohol phosphatidyltransferase KM317_17050 PF03129 Anticodon binding domain KM317_17050 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM317_17050 PF04073 Aminoacyl-tRNA editing domain KM317_17055 PF00816 H-NS histone family KM317_17065 PF02405 Permease MlaE KM317_17070 PF00005 ABC transporter KM317_17075 PF02470 MlaD protein KM317_17075 PF03886 ABC-type transport auxiliary lipoprotein component KM317_17095 PF14307 Glycosyltransferase WbsX KM317_17095 PF05045 Rhamnan synthesis protein F KM317_17100 PF01144 Coenzyme A transferase KM317_17105 PF01144 Coenzyme A transferase KM317_17110 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KM317_17110 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KM317_17110 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KM317_17110 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KM317_17115 PF01050 Mannose-6-phosphate isomerase KM317_17115 PF00483 Nucleotidyl transferase KM317_17120 PF04321 RmlD substrate binding domain KM317_17125 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase KM317_17130 PF00483 Nucleotidyl transferase KM317_17135 PF16363 GDP-mannose 4,6 dehydratase KM317_17140 PF01012 Electron transfer flavoprotein domain KM317_17145 PF00766 Electron transfer flavoprotein FAD-binding domain KM317_17145 PF01012 Electron transfer flavoprotein domain KM317_17160 PF04030 D-arabinono-1,4-lactone oxidase KM317_17160 PF01565 FAD binding domain KM317_17165 PF00106 short chain dehydrogenase KM317_17170 PF01370 NAD dependent epimerase/dehydratase family KM317_17185 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KM317_17185 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM317_17210 PF00535 Glycosyl transferase family 2 KM317_17225 PF00535 Glycosyl transferase family 2 KM317_17230 PF00535 Glycosyl transferase family 2 KM317_17235 PF00398 Ribosomal RNA adenine dimethylase KM317_17240 PF00005 ABC transporter KM317_17250 PF01053 Cys/Met metabolism PLP-dependent enzyme KM317_17255 PF00291 Pyridoxal-phosphate dependent enzyme KM317_17255 PF00571 CBS domain KM317_17275 PF00437 Type II/IV secretion system protein KM317_17280 PF02798 Glutathione S-transferase, N-terminal domain KM317_17280 PF14497 Glutathione S-transferase, C-terminal domain KM317_17295 PF01242 6-pyruvoyl tetrahydropterin synthase KM317_17310 PF13185 GAF domain KM317_17320 PF07715 TonB-dependent Receptor Plug Domain KM317_17320 PF00593 TonB dependent receptor KM317_17325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM317_17325 PF03466 LysR substrate binding domain KM317_17340 PF16123 Hydroxyacylglutathione hydrolase C-terminus KM317_17340 PF00753 Metallo-beta-lactamase superfamily KM317_17345 PF13419 Haloacid dehalogenase-like hydrolase KM317_17350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM317_17350 PF03466 LysR substrate binding domain KM317_17365 PF11798 IMS family HHH motif KM317_17365 PF00817 impB/mucB/samB family KM317_17365 PF11799 impB/mucB/samB family C-terminal domain KM317_17370 PF07977 FabA-like domain KM317_17375 PF02801 Beta-ketoacyl synthase, C-terminal domain KM317_17375 PF00109 Beta-ketoacyl synthase, N-terminal domain KM317_17385 PF01432 Peptidase family M3 KM317_17390 PF00291 Pyridoxal-phosphate dependent enzyme KM317_17400 PF00403 Heavy-metal-associated domain KM317_17405 PF09278 MerR, DNA binding KM317_17405 PF00376 MerR family regulatory protein KM317_17415 PF07732 Multicopper oxidase KM317_17415 PF07731 Multicopper oxidase KM317_17415 PF00394 Multicopper oxidase KM317_17420 PF05275 Copper resistance protein B precursor (CopB) KM317_17435 PF01380 SIS domain KM317_17445 PF00005 ABC transporter KM317_17455 PF02687 FtsX-like permease family KM317_17455 PF00005 ABC transporter KM317_17455 PF12704 MacB-like periplasmic core domain KM317_17460 PF02687 FtsX-like permease family KM317_17460 PF12704 MacB-like periplasmic core domain KM317_17465 PF02687 FtsX-like permease family KM317_17465 PF12704 MacB-like periplasmic core domain KM317_17470 PF02687 FtsX-like permease family KM317_17470 PF12704 MacB-like periplasmic core domain KM317_17475 PF02687 FtsX-like permease family KM317_17475 PF12704 MacB-like periplasmic core domain KM317_17480 PF00005 ABC transporter KM317_17480 PF02687 FtsX-like permease family KM317_17480 PF12704 MacB-like periplasmic core domain KM317_17485 PF02687 FtsX-like permease family KM317_17485 PF00005 ABC transporter KM317_17485 PF12704 MacB-like periplasmic core domain KM317_17490 PF00005 ABC transporter KM317_17490 PF02687 FtsX-like permease family KM317_17490 PF12704 MacB-like periplasmic core domain KM317_17495 PF00005 ABC transporter KM317_17495 PF02687 FtsX-like permease family KM317_17495 PF12704 MacB-like periplasmic core domain KM317_17505 PF02954 Bacterial regulatory protein, Fis family KM317_17505 PF00072 Response regulator receiver domain KM317_17505 PF00158 Sigma-54 interaction domain KM317_17510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM317_17510 PF00989 PAS fold KM317_17510 PF00512 His Kinase A (phospho-acceptor) domain KM317_17525 PF00132 Bacterial transferase hexapeptide (six repeats) KM317_17525 PF14602 Hexapeptide repeat of succinyl-transferase KM317_17525 PF12804 MobA-like NTP transferase domain KM317_17540 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain KM317_17540 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain KM317_17545 PF02874 ATP synthase alpha/beta family, beta-barrel domain KM317_17545 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KM317_17550 PF00231 ATP synthase KM317_17555 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KM317_17555 PF00306 ATP synthase alpha/beta chain, C terminal domain KM317_17555 PF02874 ATP synthase alpha/beta family, beta-barrel domain KM317_17560 PF00213 ATP synthase delta (OSCP) subunit KM317_17565 PF00430 ATP synthase B/B' CF(0) KM317_17570 PF00137 ATP synthase subunit C KM317_17575 PF00119 ATP synthase A chain KM317_17590 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM317_17590 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM317_17595 PF00364 Biotin-requiring enzyme KM317_17595 PF02817 e3 binding domain KM317_17595 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KM317_17620 PF03180 NLPA lipoprotein KM317_17625 PF00528 Binding-protein-dependent transport system inner membrane component KM317_17630 PF09383 NIL domain KM317_17630 PF00005 ABC transporter KM317_17635 PF00892 EamA-like transporter family KM317_17640 PF04461 Protein of unknown function (DUF520) KM317_17650 PF01479 S4 domain KM317_17650 PF00849 RNA pseudouridylate synthase KM317_17655 PF05175 Methyltransferase small domain KM317_17655 PF08468 Methyltransferase small domain N-terminal KM317_17665 PF07995 Glucose / Sorbosone dehydrogenase KM317_17675 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM317_17675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM317_17675 PF00512 His Kinase A (phospho-acceptor) domain KM317_17675 PF01627 Hpt domain KM317_17675 PF00989 PAS fold KM317_17675 PF00072 Response regulator receiver domain KM317_17695 PF00842 Alanine racemase, C-terminal domain KM317_17695 PF01168 Alanine racemase, N-terminal domain KM317_17700 PF01266 FAD dependent oxidoreductase KM317_17705 PF01037 Lrp/AsnC ligand binding domain KM317_17720 PF01641 SelR domain KM317_17725 PF01618 MotA/TolQ/ExbB proton channel family KM317_17730 PF13677 Membrane MotB of proton-channel complex MotA/MotB KM317_17730 PF00691 OmpA family KM317_17770 PF01061 ABC-2 type transporter KM317_17775 PF00005 ABC transporter KM317_17780 PF00999 Sodium/hydrogen exchanger family KM317_17785 PF05711 Macrocin-O-methyltransferase (TylF) KM317_17790 PF02469 Fasciclin domain KM317_17795 PF03167 Uracil DNA glycosylase superfamily KM317_17805 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase KM317_17810 PF03466 LysR substrate binding domain KM317_17810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM317_17815 PF03358 NADPH-dependent FMN reductase KM317_17820 PF03466 LysR substrate binding domain KM317_17820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM317_17825 PF00248 Aldo/keto reductase family KM317_17830 PF00248 Aldo/keto reductase family KM317_17840 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KM317_17840 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KM317_17845 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family KM317_17865 PF17151 Periplasmic sensor domain KM317_17865 PF00990 Diguanylate cyclase, GGDEF domain KM317_17870 PF00355 Rieske [2Fe-2S] domain KM317_17875 PF08447 PAS fold KM317_17875 PF00990 Diguanylate cyclase, GGDEF domain KM317_17875 PF00563 EAL domain KM317_17875 PF08448 PAS fold KM317_17895 PF08889 WbqC-like protein family KM317_17900 PF00535 Glycosyl transferase family 2 KM317_17905 PF13649 Methyltransferase domain KM317_17915 PF00892 EamA-like transporter family KM317_17925 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KM317_17935 PF07715 TonB-dependent Receptor Plug Domain KM317_17935 PF00593 TonB dependent receptor KM317_17950 PF00072 Response regulator receiver domain KM317_17950 PF04397 LytTr DNA-binding domain KM317_17955 PF07694 5TMR of 5TMR-LYT KM317_17955 PF06580 Histidine kinase KM317_17960 PF04199 Putative cyclase KM317_17980 PF13520 Amino acid permease KM317_17995 PF00675 Insulinase (Peptidase family M16) KM317_17995 PF05193 Peptidase M16 inactive domain KM317_18000 PF01204 Trehalase KM317_18005 PF01464 Transglycosylase SLT domain KM317_18015 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM317_18020 PF12833 Helix-turn-helix domain KM317_18020 PF06719 AraC-type transcriptional regulator N-terminus KM317_18030 PF01544 CorA-like Mg2+ transporter protein KM317_18035 PF00324 Amino acid permease KM317_18045 PF00892 EamA-like transporter family KM317_18065 PF03466 LysR substrate binding domain KM317_18065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM317_18070 PF02525 Flavodoxin-like fold KM317_18075 PF07759 Protein of unknown function (DUF1615) KM317_18080 PF08532 Beta-galactosidase trimerisation domain KM317_18080 PF02449 Beta-galactosidase KM317_18080 PF08533 Beta-galactosidase C-terminal domain KM317_18085 PF00561 alpha/beta hydrolase fold KM317_18155 PF13614 AAA domain KM317_18160 PF00456 Transketolase, thiamine diphosphate binding domain KM317_18160 PF17831 Pyruvate dehydrogenase E1 component middle domain KM317_18165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM317_18165 PF00672 HAMP domain KM317_18165 PF02743 Cache domain KM317_18190 PF04264 YceI-like domain KM317_18195 PF00881 Nitroreductase family KM317_18235 PF03009 Glycerophosphoryl diester phosphodiesterase family KM317_18250 PF03710 Glutamate-ammonia ligase adenylyltransferase KM317_18250 PF08335 GlnD PII-uridylyltransferase KM317_18260 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain KM317_18260 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain KM317_18265 PF01541 GIY-YIG catalytic domain KM317_18270 PF00793 DAHP synthetase I family KM317_18275 PF00118 TCP-1/cpn60 chaperonin family KM317_18280 PF00166 Chaperonin 10 Kd subunit KM317_18285 PF04231 Endonuclease I KM317_18290 PF03091 CutA1 divalent ion tolerance protein KM317_18295 PF11412 Disulphide bond corrector protein DsbC KM317_18295 PF02683 Cytochrome C biogenesis protein transmembrane region KM317_18300 PF00578 AhpC/TSA family KM317_18310 PF01220 Dehydroquinase class II KM317_18315 PF00364 Biotin-requiring enzyme KM317_18320 PF02785 Biotin carboxylase C-terminal domain KM317_18320 PF00289 Biotin carboxylase, N-terminal domain KM317_18320 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KM317_18345 PF01381 Helix-turn-helix KM317_18355 PF02954 Bacterial regulatory protein, Fis family KM317_18385 PF01066 CDP-alcohol phosphatidyltransferase KM317_18390 PF02142 MGS-like domain KM317_18390 PF01808 AICARFT/IMPCHase bienzyme KM317_18395 PF02844 Phosphoribosylglycinamide synthetase, N domain KM317_18395 PF02843 Phosphoribosylglycinamide synthetase, C domain KM317_18395 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KM317_18405 PF12805 FUSC-like inner membrane protein yccS KM317_18410 PF07690 Major Facilitator Superfamily KM317_18415 PF03466 LysR substrate binding domain KM317_18415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM317_18445 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain KM317_18445 PF00293 NUDIX domain KM317_18445 PF09297 NADH pyrophosphatase zinc ribbon domain KM317_18450 PF01521 Iron-sulphur cluster biosynthesis KM317_18470 PF00563 EAL domain KM317_18470 PF00990 Diguanylate cyclase, GGDEF domain KM317_18470 PF00072 Response regulator receiver domain KM317_18475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM317_18475 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KM317_18475 PF00672 HAMP domain KM317_18475 PF00512 His Kinase A (phospho-acceptor) domain KM317_18475 PF00072 Response regulator receiver domain KM317_18475 PF01627 Hpt domain KM317_18485 PF00210 Ferritin-like domain KM317_18490 PF04324 BFD-like [2Fe-2S] binding domain KM317_18495 PF00293 NUDIX domain KM317_18510 PF00380 Ribosomal protein S9/S16 KM317_18515 PF00572 Ribosomal protein L13 KM317_18520 PF03232 Ubiquinone biosynthesis protein COQ7 KM317_18530 PF00893 Small Multidrug Resistance protein KM317_18535 PF02675 S-adenosylmethionine decarboxylase KM317_18540 PF00027 Cyclic nucleotide-binding domain KM317_18540 PF00325 Bacterial regulatory proteins, crp family KM317_18545 PF01925 Sulfite exporter TauE/SafE KM317_18550 PF02156 Glycosyl hydrolase family 26 KM317_18550 PF00404 Dockerin type I domain KM317_18550 PF00150 Cellulase (glycosyl hydrolase family 5) KM317_18550 PF03425 Carbohydrate binding domain (family 11) KM317_18560 PF00218 Indole-3-glycerol phosphate synthase KM317_18565 PF00591 Glycosyl transferase family, a/b domain KM317_18565 PF02885 Glycosyl transferase family, helical bundle domain KM317_18570 PF00117 Glutamine amidotransferase class-I KM317_18575 PF01212 Beta-eliminating lyase KM317_18580 PF00425 chorismate binding enzyme KM317_18580 PF04715 Anthranilate synthase component I, N terminal region KM317_18585 PF00781 Diacylglycerol kinase catalytic domain KM317_18590 PF00583 Acetyltransferase (GNAT) family KM317_18595 PF00834 Ribulose-phosphate 3 epimerase family KM317_18600 PF00226 DnaJ domain KM317_18600 PF05099 Tellurite resistance protein TerB KM317_18605 PF01259 SAICAR synthetase KM317_18625 PF00182 Chitinase class I KM317_18635 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family KM317_18640 PF13244 Domain of unknown function (DUF4040) KM317_18640 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter KM317_18640 PF00361 Proton-conducting membrane transporter KM317_18640 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KM317_18645 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KM317_18650 PF00361 Proton-conducting membrane transporter KM317_18660 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) KM317_18665 PF03334 Na+/H+ antiporter subunit KM317_18670 PF01699 Sodium/calcium exchanger protein KM317_18690 PF04209 homogentisate 1,2-dioxygenase KM317_18695 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM317_18710 PF00854 POT family KM317_18715 PF03301 Tryptophan 2,3-dioxygenase KM317_18725 PF00676 Dehydrogenase E1 component KM317_18730 PF02780 Transketolase, C-terminal domain KM317_18730 PF02779 Transketolase, pyrimidine binding domain KM317_18740 PF02817 e3 binding domain KM317_18740 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KM317_18740 PF00364 Biotin-requiring enzyme KM317_18750 PF04151 Bacterial pre-peptidase C-terminal domain KM317_18750 PF02868 Thermolysin metallopeptidase, alpha-helical domain KM317_18750 PF01447 Thermolysin metallopeptidase, catalytic domain KM317_18750 PF07504 Fungalysin/Thermolysin Propeptide Motif KM317_18750 PF03413 Peptidase propeptide and YPEB domain KM317_18755 PF00270 DEAD/DEAH box helicase KM317_18755 PF00271 Helicase conserved C-terminal domain KM317_18780 PF00294 pfkB family carbohydrate kinase KM317_18785 PF00990 Diguanylate cyclase, GGDEF domain KM317_18790 PF05661 Protein of unknown function (DUF808) KM317_18795 PF02734 DAK2 domain KM317_18795 PF02733 Dak1 domain KM317_18805 PF03109 ABC1 family KM317_18810 PF00924 Mechanosensitive ion channel KM317_18810 PF12795 Mechanosensitive ion channel porin domain KM317_18810 PF12794 Mechanosensitive ion channel inner membrane domain 1 KM317_18815 PF00550 Phosphopantetheine attachment site KM317_18815 PF00107 Zinc-binding dehydrogenase KM317_18815 PF16197 Ketoacyl-synthetase C-terminal extension KM317_18815 PF00109 Beta-ketoacyl synthase, N-terminal domain KM317_18815 PF02801 Beta-ketoacyl synthase, C-terminal domain KM317_18815 PF08659 KR domain KM317_18815 PF00698 Acyl transferase domain KM317_18815 PF14765 Polyketide synthase dehydratase KM317_18815 PF08240 Alcohol dehydrogenase GroES-like domain KM317_18820 PF00328 Histidine phosphatase superfamily (branch 2) KM317_18835 PF04542 Sigma-70 region 2 KM317_18835 PF08281 Sigma-70, region 4 KM317_18835 PF12680 SnoaL-like domain KM317_18840 PF02678 Pirin KM317_18840 PF05726 Pirin C-terminal cupin domain KM317_18855 PF07729 FCD domain KM317_18855 PF00392 Bacterial regulatory proteins, gntR family KM317_18870 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase KM317_18875 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG KM317_18885 PF01039 Carboxyl transferase domain KM317_18890 PF06857 Malonate decarboxylase delta subunit (MdcD) KM317_18895 PF16957 Malonate decarboxylase, alpha subunit, transporter KM317_18905 PF09339 IclR helix-turn-helix domain KM317_18905 PF01614 Bacterial transcriptional regulator KM317_18915 PF05336 L-rhamnose mutarotase KM317_18920 PF13378 Enolase C-terminal domain-like KM317_18920 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KM317_18935 PF13419 Haloacid dehalogenase-like hydrolase KM317_18945 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KM317_18945 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KM317_18950 PF00230 Major intrinsic protein KM317_18955 PF01266 FAD dependent oxidoreductase KM317_18955 PF16901 C-terminal domain of alpha-glycerophosphate oxidase KM317_18960 PF00455 DeoR C terminal sensor domain KM317_18960 PF08220 DeoR-like helix-turn-helix domain KM317_18965 PF07308 Protein of unknown function (DUF1456) KM317_18975 PF01966 HD domain KM317_18975 PF00013 KH domain KM317_18975 PF12072 Domain of unknown function (DUF3552) KM317_18985 PF07715 TonB-dependent Receptor Plug Domain KM317_18985 PF00593 TonB dependent receptor KM317_19000 PF01738 Dienelactone hydrolase family KM317_19015 PF07715 TonB-dependent Receptor Plug Domain KM317_19015 PF00593 TonB dependent receptor KM317_19055 PF00595 PDZ domain KM317_19055 PF13180 PDZ domain KM317_19075 PF01594 AI-2E family transporter KM317_19085 PF00883 Cytosol aminopeptidase family, catalytic domain KM317_19085 PF02789 Cytosol aminopeptidase family, N-terminal domain KM317_19090 PF00199 Catalase KM317_19100 PF00196 Bacterial regulatory proteins, luxR family KM317_19100 PF00072 Response regulator receiver domain KM317_19105 PF07730 Histidine kinase KM317_19115 PF00005 ABC transporter KM317_19125 PF00005 ABC transporter KM317_19130 PF12704 MacB-like periplasmic core domain KM317_19130 PF02687 FtsX-like permease family KM317_19150 PF00892 EamA-like transporter family KM317_19160 PF00753 Metallo-beta-lactamase superfamily KM317_19165 PF00579 tRNA synthetases class I (W and Y) KM317_19175 PF05532 CsbD-like KM317_19190 PF00491 Arginase family KM317_19205 PF03309 Type III pantothenate kinase KM317_19210 PF02237 Biotin protein ligase C terminal domain KM317_19210 PF03099 Biotin/lipoate A/B protein ligase family KM317_19220 PF06167 Glucose-regulated metallo-peptidase M90 KM317_19235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM317_19240 PF00486 Transcriptional regulatory protein, C terminal KM317_19240 PF00072 Response regulator receiver domain KM317_19250 PF01207 Dihydrouridine synthase (Dus) KM317_19255 PF08267 Cobalamin-independent synthase, N-terminal domain KM317_19255 PF01717 Cobalamin-independent synthase, Catalytic domain KM317_19265 PF00551 Formyl transferase KM317_19275 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KM317_19275 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KM317_19280 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KM317_19285 PF02146 Sir2 family KM317_19290 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM317_19295 PF07690 Major Facilitator Superfamily KM317_19300 PF03466 LysR substrate binding domain KM317_19300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM317_19320 PF00268 Ribonucleotide reductase, small chain KM317_19325 PF03477 ATP cone domain KM317_19325 PF02867 Ribonucleotide reductase, barrel domain KM317_19325 PF00317 Ribonucleotide reductase, all-alpha domain KM317_19330 PF02146 Sir2 family KM317_19335 PF02566 OsmC-like protein KM317_19340 PF01047 MarR family KM317_19350 PF03969 AFG1-like ATPase KM317_19365 PF02492 CobW/HypB/UreG, nucleotide-binding domain KM317_19365 PF07683 Cobalamin synthesis protein cobW C-terminal domain KM317_19375 PF02694 Uncharacterised BCR, YnfA/UPF0060 family KM317_19385 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KM317_19395 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM317_19395 PF02770 Acyl-CoA dehydrogenase, middle domain KM317_19395 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM317_19400 PF01039 Carboxyl transferase domain KM317_19405 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KM317_19405 PF00364 Biotin-requiring enzyme KM317_19405 PF00289 Biotin carboxylase, N-terminal domain KM317_19405 PF02785 Biotin carboxylase C-terminal domain KM317_19415 PF00313 'Cold-shock' DNA-binding domain KM317_19430 PF13380 CoA binding domain KM317_19430 PF00583 Acetyltransferase (GNAT) family KM317_19430 PF13607 Succinyl-CoA ligase like flavodoxin domain KM317_19435 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain KM317_19435 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain KM317_19440 PF00723 Glycosyl hydrolases family 15 KM317_19445 PF00072 Response regulator receiver domain KM317_19445 PF00486 Transcriptional regulatory protein, C terminal KM317_19450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM317_19450 PF00512 His Kinase A (phospho-acceptor) domain KM317_19455 PF13018 Extended Signal Peptide of Type V secretion system KM317_19455 PF03895 YadA-like membrane anchor domain KM317_19455 PF05658 Head domain of trimeric autotransporter adhesin KM317_19455 PF05662 Coiled stalk of trimeric autotransporter adhesin KM317_19460 PF00082 Subtilase family KM317_19460 PF04151 Bacterial pre-peptidase C-terminal domain KM317_19470 PF05166 YcgL domain KM317_19475 PF02801 Beta-ketoacyl synthase, C-terminal domain KM317_19475 PF00109 Beta-ketoacyl synthase, N-terminal domain KM317_19485 PF00535 Glycosyl transferase family 2 KM317_19490 PF01494 FAD binding domain KM317_19495 PF00106 short chain dehydrogenase KM317_19520 PF07977 FabA-like domain KM317_19535 PF00550 Phosphopantetheine attachment site KM317_19540 PF04820 Tryptophan halogenase KM317_19560 PF02322 Cytochrome bd terminal oxidase subunit II KM317_19565 PF01654 Cytochrome bd terminal oxidase subunit I KM317_19580 PF00296 Luciferase-like monooxygenase KM317_19590 PF01218 Coproporphyrinogen III oxidase KM317_19600 PF04239 Protein of unknown function (DUF421) KM317_19605 PF00476 DNA polymerase family A KM317_19605 PF01612 3'-5' exonuclease KM317_19605 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KM317_19605 PF01367 5'-3' exonuclease, C-terminal SAM fold KM317_19625 PF00582 Universal stress protein family KM317_19630 PF14602 Hexapeptide repeat of succinyl-transferase KM317_19630 PF12464 Maltose acetyltransferase KM317_19655 PF00580 UvrD/REP helicase N-terminal domain KM317_19655 PF13361 UvrD-like helicase C-terminal domain KM317_19665 PF13396 Phospholipase_D-nuclease N-terminal KM317_19665 PF13091 PLD-like domain KM317_19670 PF00471 Ribosomal protein L33 KM317_19675 PF00830 Ribosomal L28 family KM317_19685 PF00873 AcrB/AcrD/AcrF family KM317_19720 PF00535 Glycosyl transferase family 2 KM317_19725 PF01370 NAD dependent epimerase/dehydratase family KM317_19730 PF02195 ParB-like nuclease domain KM317_19730 PF17762 HTH domain found in ParB protein KM317_19735 PF13614 AAA domain KM317_19740 PF02527 rRNA small subunit methyltransferase G KM317_19750 PF01648 4'-phosphopantetheinyl transferase superfamily KM317_19755 PF04226 Transglycosylase associated protein KM317_19770 PF00171 Aldehyde dehydrogenase family KM317_19780 PF07690 Major Facilitator Superfamily KM317_19780 PF00083 Sugar (and other) transporter KM317_19790 PF16177 Acetyl-coenzyme A synthetase N-terminus KM317_19790 PF00501 AMP-binding enzyme KM317_19790 PF13193 AMP-binding enzyme C-terminal domain KM317_19795 PF00196 Bacterial regulatory proteins, luxR family KM317_19795 PF00072 Response regulator receiver domain KM317_19810 PF02659 Putative manganese efflux pump KM317_19815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM317_19815 PF00512 His Kinase A (phospho-acceptor) domain KM317_19825 PF00004 ATPase family associated with various cellular activities (AAA) KM317_19825 PF01434 Peptidase family M41 KM317_19825 PF17862 AAA+ lid domain KM317_19830 PF06165 Glycosyltransferase family 36 KM317_19830 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain KM317_19845 PF04357 TamB, inner membrane protein subunit of TAM complex KM317_19850 PF01103 Surface antigen KM317_19850 PF07244 Surface antigen variable number repeat KM317_19850 PF17243 POTRA domain TamA domain 1 KM317_19870 PF04337 Protein of unknown function, DUF480 KM317_19890 PF13332 Hemagglutinin repeat KM317_19890 PF04829 Pre-toxin domain with VENN motif KM317_19890 PF05594 Haemagluttinin repeat KM317_19890 PF05594 Haemagluttinin repeat KM317_19890 PF04829 Pre-toxin domain with VENN motif KM317_19890 PF13332 Hemagglutinin repeat KM317_19895 PF05594 Haemagluttinin repeat KM317_19895 PF04829 Pre-toxin domain with VENN motif KM317_19895 PF15526 Novel toxin 21 KM317_19895 PF13332 Hemagglutinin repeat KM317_19895 PF05860 haemagglutination activity domain KM317_19900 PF08479 POTRA domain, ShlB-type KM317_19900 PF17287 POTRA domain KM317_19900 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB KM317_19910 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KM317_19915 PF04820 Tryptophan halogenase KM317_19925 PF00356 Bacterial regulatory proteins, lacI family KM317_19935 PF01553 Acyltransferase KM317_19955 PF04616 Glycosyl hydrolases family 43 KM317_19975 PF00553 Cellulose binding domain KM317_19975 PF03422 Carbohydrate binding module (family 6) KM317_19975 PF00331 Glycosyl hydrolase family 10 KM317_19980 PF02614 Glucuronate isomerase KM317_19985 PF00331 Glycosyl hydrolase family 10 KM317_19995 PF08450 SMP-30/Gluconolactonase/LRE-like region KM317_20040 PF01232 Mannitol dehydrogenase Rossmann domain KM317_20040 PF08125 Mannitol dehydrogenase C-terminal domain KM317_20045 PF07691 PA14 domain KM317_20045 PF14310 Fibronectin type III-like domain KM317_20045 PF00933 Glycosyl hydrolase family 3 N terminal domain KM317_20045 PF01915 Glycosyl hydrolase family 3 C-terminal domain KM317_20050 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain KM317_20050 PF04616 Glycosyl hydrolases family 43 KM317_20055 PF13378 Enolase C-terminal domain-like KM317_20055 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KM317_20065 PF03648 Glycosyl hydrolase family 67 N-terminus KM317_20065 PF07488 Glycosyl hydrolase family 67 middle domain KM317_20065 PF07477 Glycosyl hydrolase family 67 C-terminus KM317_20070 PF00356 Bacterial regulatory proteins, lacI family KM317_20080 PF01171 PP-loop family KM317_20085 PF04381 Putative exonuclease, RdgC KM317_20095 PF12697 Alpha/beta hydrolase family KM317_20100 PF00762 Ferrochelatase KM317_20110 PF02416 mttA/Hcf106 family KM317_20115 PF02416 mttA/Hcf106 family KM317_20120 PF00902 Sec-independent protein translocase protein (TatC) KM317_20130 PF00958 GMP synthase C terminal domain KM317_20130 PF00117 Glutamine amidotransferase class-I KM317_20135 PF00437 Type II/IV secretion system protein KM317_20135 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KM317_20140 PF02091 Glycyl-tRNA synthetase alpha subunit KM317_20150 PF05746 DALR anticodon binding domain KM317_20150 PF02092 Glycyl-tRNA synthetase beta subunit KM317_20160 PF00580 UvrD/REP helicase N-terminal domain KM317_20160 PF13361 UvrD-like helicase C-terminal domain KM317_20165 PF00265 Thymidine kinase KM317_20175 PF04349 Periplasmic glucan biosynthesis protein, MdoG KM317_20185 PF06827 Zinc finger found in FPG and IleRS KM317_20185 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KM317_20185 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KM317_20200 PF00005 ABC transporter KM317_20210 PF01926 50S ribosome-binding GTPase KM317_20210 PF12631 MnmE helical domain KM317_20210 PF10396 GTP-binding protein TrmE N-terminus KM317_20215 PF02096 60Kd inner membrane protein KM317_20215 PF14849 YidC periplasmic domain KM317_20220 PF00825 Ribonuclease P KM317_20225 PF00468 Ribosomal protein L34