NZ30_00005 SM00382 ATPases associated with a variety of cellular activities NZ30_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain NZ30_00010 SM00480 DNA polymerase III beta subunit NZ30_00020 SM00387 Histidine kinase-like ATPases NZ30_00020 SM00433 TopoisomeraseII NZ30_00035 SM00028 Tetratricopeptide repeats NZ30_00075 SM00155 Phospholipase D. Active site motifs. NZ30_00080 SM00729 Elongator protein 3, MiaB family, Radical SAM NZ30_00085 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. NZ30_00115 SM00382 ATPases associated with a variety of cellular activities NZ30_00125 SM00829 Enoylreductase NZ30_00145 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen NZ30_00160 SM00345 helix_turn_helix gluconate operon transcriptional repressor NZ30_00160 SM00895 NZ30_00160 NZ30_00275 SM00267 diguanylate cyclase NZ30_00315 SM00354 helix_turn _helix lactose operon repressor NZ30_00345 SM00344 helix_turn_helix ASNC type NZ30_00385 SM00014 Acid phosphatase homologues NZ30_00390 SM00014 Acid phosphatase homologues NZ30_00420 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. NZ30_00450 SM00421 helix_turn_helix, Lux Regulon NZ30_00450 SM00448 cheY-homologous receiver domain NZ30_00455 SM00387 Histidine kinase-like ATPases NZ30_00455 SM00388 His Kinase A (phosphoacceptor) domain NZ30_00510 SM00382 ATPases associated with a variety of cellular activities NZ30_00660 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. NZ30_00755 SM01126 NZ30_00755 NZ30_00805 SM00487 DEAD-like helicases superfamily NZ30_00805 SM00490 helicase superfamily c-terminal domain NZ30_00890 SM00855 Phosphoglycerate mutase family NZ30_00895 SM00867 YceI-like domain NZ30_00900 SM00155 Phospholipase D. Active site motifs. NZ30_00910 SM00563 Phosphate acyltransferases NZ30_00920 SM00028 Tetratricopeptide repeats NZ30_00935 SM01230 NZ30_00935 NZ30_00940 SM00938 Nitrogen regulatory protein P-II NZ30_00950 SM00387 Histidine kinase-like ATPases NZ30_00950 SM00388 His Kinase A (phosphoacceptor) domain NZ30_00955 SM00382 ATPases associated with a variety of cellular activities NZ30_00955 SM00448 cheY-homologous receiver domain NZ30_01015 SM00450 Rhodanese Homology Domain NZ30_01085 SM00028 Tetratricopeptide repeats NZ30_01085 SM00862 Transcriptional regulatory protein, C terminal NZ30_01140 SM00563 Phosphate acyltransferases NZ30_01185 SM00100 Cyclic nucleotide-monophosphate binding domain NZ30_01185 SM00267 diguanylate cyclase NZ30_01190 SM00028 Tetratricopeptide repeats NZ30_01255 SM00829 Enoylreductase NZ30_01280 SM00487 DEAD-like helicases superfamily NZ30_01280 SM00490 helicase superfamily c-terminal domain NZ30_01280 SM00847 Helicase associated domain (HA2) Add an annotation NZ30_01340 SM00858 NZ30_01340 NZ30_01380 SM00382 ATPases associated with a variety of cellular activities NZ30_01395 SM00530 Helix-turn-helix XRE-family like proteins NZ30_01405 SM00382 ATPases associated with a variety of cellular activities NZ30_01460 SM01004 Delta-aminolevulinic acid dehydratase NZ30_01475 SM00477 DNA/RNA non-specific endonuclease NZ30_01475 SM00892 DNA/RNA non-specific endonuclease NZ30_01500 SM00491 NZ30_01500 NZ30_01515 SM01060 NZ30_01515 NZ30_01520 SM00248 ankyrin repeats NZ30_01630 SM00382 ATPases associated with a variety of cellular activities NZ30_01665 SM00344 helix_turn_helix ASNC type NZ30_01685 SM00090 RIO-like kinase NZ30_01705 SM00052 Putative diguanylate phosphodiesterase NZ30_01710 SM01228 NZ30_01710 NZ30_01760 SM00729 Elongator protein 3, MiaB family, Radical SAM NZ30_01760 SM00876 Biotin and Thiamin Synthesis associated domain NZ30_01800 SM00382 ATPases associated with a variety of cellular activities NZ30_01810 SM00938 Nitrogen regulatory protein P-II NZ30_01865 SM00822 NZ30_01865 NZ30_01875 SM00836 DALR anticodon binding domain NZ30_01875 SM01016 Arginyl tRNA synthetase N terminal dom NZ30_01965 SM00829 Enoylreductase NZ30_01985 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. NZ30_01985 SM00245 tail specific protease NZ30_02095 SM00400 zinc finger NZ30_02095 SM00493 NZ30_02095 NZ30_02095 SM00766 DNA primase DnaG DnaB-binding NZ30_02120 SM00905 Dihydroneopterin aldolase NZ30_02135 SM01217 NZ30_02135 NZ30_02175 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain NZ30_02190 SM00644 NZ30_02190 NZ30_02255 SM01150 NZ30_02255 NZ30_02290 SM00257 Lysin motif NZ30_02330 SM00487 DEAD-like helicases superfamily NZ30_02365 SM00357 Cold shock protein domain NZ30_02365 SM00382 ATPases associated with a variety of cellular activities NZ30_02365 SM00959 Rho termination factor, N-terminal domain NZ30_02375 SM00487 DEAD-like helicases superfamily NZ30_02375 SM00490 helicase superfamily c-terminal domain NZ30_02380 SM00382 ATPases associated with a variety of cellular activities NZ30_02390 SM00448 cheY-homologous receiver domain NZ30_02395 SM00986 Uracil DNA glycosylase superfamily NZ30_02395 SM00987 UreE urease accessory protein, C-terminal domain NZ30_02415 SM00487 DEAD-like helicases superfamily NZ30_02415 SM00490 helicase superfamily c-terminal domain NZ30_02465 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain NZ30_02465 SM00437 Bacterial DNA topoisomerase I DNA-binding domain NZ30_02465 SM00493 NZ30_02465 NZ30_02490 SM00257 Lysin motif NZ30_02600 SM00354 helix_turn _helix lactose operon repressor NZ30_02610 SM00642 Alpha-amylase domain NZ30_02615 SM00642 Alpha-amylase domain NZ30_02620 SM00642 Alpha-amylase domain NZ30_02630 SM01126 NZ30_02630 NZ30_02705 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NZ30_02705 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NZ30_02705 SM01049 NZ30_02705 NZ30_02740 SM00267 diguanylate cyclase NZ30_02740 SM00387 Histidine kinase-like ATPases NZ30_02740 SM00388 His Kinase A (phosphoacceptor) domain NZ30_02745 SM00382 ATPases associated with a variety of cellular activities NZ30_02780 SM00387 Histidine kinase-like ATPases NZ30_02780 SM00388 His Kinase A (phosphoacceptor) domain NZ30_02785 SM00382 ATPases associated with a variety of cellular activities NZ30_02785 SM00448 cheY-homologous receiver domain NZ30_02810 SM00487 DEAD-like helicases superfamily NZ30_02825 SM01040 BRO family, N-terminal domain NZ30_02850 SM00448 cheY-homologous receiver domain NZ30_02850 SM01012 NZ30_02850 NZ30_02875 SM00926 Molybdopterin oxidoreductase Fe4S4 domain NZ30_02885 SM00642 Alpha-amylase domain NZ30_02895 SM00642 Alpha-amylase domain NZ30_02905 SM00642 Alpha-amylase domain NZ30_02910 SM00642 Alpha-amylase domain NZ30_02925 SM00448 cheY-homologous receiver domain NZ30_02930 SM00387 Histidine kinase-like ATPases NZ30_02930 SM00388 His Kinase A (phosphoacceptor) domain NZ30_02945 SM00448 cheY-homologous receiver domain NZ30_02945 SM00850 LytTr DNA-binding domain NZ30_03035 SM00382 ATPases associated with a variety of cellular activities NZ30_03035 SM01086 C-terminal, D2-small domain, of ClpB protein NZ30_03065 SM01263 NZ30_03065 NZ30_03085 SM00382 ATPases associated with a variety of cellular activities NZ30_03100 SM00268 Actin NZ30_03130 SM00710 Parallel beta-helix repeats NZ30_03145 SM00936 Penicillin-binding protein 5, C-terminal domain NZ30_03155 SM01126 NZ30_03155 NZ30_03185 SM00729 Elongator protein 3, MiaB family, Radical SAM NZ30_03190 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. NZ30_03190 SM00245 tail specific protease NZ30_03220 SM01126 NZ30_03220 NZ30_03245 SM00729 Elongator protein 3, MiaB family, Radical SAM NZ30_03265 SM00072 Guanylate kinase homologues. NZ30_03270 SM01409 NZ30_03270 NZ30_03275 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. NZ30_03275 SM00954 Region found in RelA / SpoT proteins NZ30_03290 SM00487 DEAD-like helicases superfamily NZ30_03290 SM00490 helicase superfamily c-terminal domain NZ30_03380 SM00382 ATPases associated with a variety of cellular activities NZ30_03390 SM00448 cheY-homologous receiver domain NZ30_03390 SM00862 Transcriptional regulatory protein, C terminal NZ30_03395 SM00387 Histidine kinase-like ATPases NZ30_03395 SM00388 His Kinase A (phosphoacceptor) domain NZ30_03455 SM00650 Ribosomal RNA adenine dimethylases NZ30_03610 SM00382 ATPases associated with a variety of cellular activities NZ30_03655 SM00028 Tetratricopeptide repeats NZ30_03660 SM00937 NZ30_03660 NZ30_03670 SM00028 Tetratricopeptide repeats NZ30_03690 SM01400 NZ30_03690 NZ30_03740 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. NZ30_03740 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. NZ30_03745 SM00649 Ribosomal protein L11/L12 NZ30_03770 SM00663 RNA polymerase I subunit A N-terminus NZ30_03785 SM00838 Elongation factor G C-terminus NZ30_03785 SM00889 Elongation factor G, domain IV NZ30_03795 SM01403 NZ30_03795 NZ30_03815 SM01382 NZ30_03815 NZ30_03815 SM01383 NZ30_03815 NZ30_03830 SM00322 K homology RNA-binding domain NZ30_03850 SM01374 NZ30_03850 NZ30_03855 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. NZ30_03915 SM00363 S4 RNA-binding domain NZ30_03915 SM01390 NZ30_03915 NZ30_03920 SM00662 RNA polymerases D NZ30_03955 SM00838 Elongation factor G C-terminus NZ30_04040 SM00829 Enoylreductase NZ30_04075 SM00363 S4 RNA-binding domain NZ30_04100 SM00382 ATPases associated with a variety of cellular activities NZ30_04110 SM00829 Enoylreductase NZ30_04120 SM00855 Phosphoglycerate mutase family NZ30_04165 SM00014 Acid phosphatase homologues NZ30_04185 SM00387 Histidine kinase-like ATPases NZ30_04185 SM00388 His Kinase A (phosphoacceptor) domain NZ30_04190 SM00448 cheY-homologous receiver domain NZ30_04190 SM00862 Transcriptional regulatory protein, C terminal NZ30_04210 SM01329 NZ30_04210 NZ30_04255 SM00382 ATPases associated with a variety of cellular activities NZ30_04255 SM00994 ClpX C4-type zinc finger NZ30_04255 SM01086 C-terminal, D2-small domain, of ClpB protein NZ30_04260 SM00382 ATPases associated with a variety of cellular activities NZ30_04260 SM00464 Found in ATP-dependent protease La (LON) NZ30_04265 SM00411 bacterial (prokaryotic) histone like domain NZ30_04295 SM00257 Lysin motif NZ30_04300 SM00849 Metallo-beta-lactamase superfamily NZ30_04315 SM00479 NZ30_04315 NZ30_04320 SM00331 Sigma factor PP2C-like phosphatases NZ30_04320 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain NZ30_04355 SM00729 Elongator protein 3, MiaB family, Radical SAM NZ30_04475 SM00382 ATPases associated with a variety of cellular activities NZ30_04485 SM00493 NZ30_04485 NZ30_04500 SM00460 Transglutaminase/protease-like homologues NZ30_04510 SM00382 ATPases associated with a variety of cellular activities NZ30_04550 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. NZ30_04555 SM00822 NZ30_04555 NZ30_04565 SM00825 Beta-ketoacyl synthase NZ30_04610 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain NZ30_04610 SM01232 NZ30_04610 NZ30_04615 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor NZ30_04640 SM00481 DNA polymerase alpha chain like domain NZ30_04760 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NZ30_04760 SM00387 Histidine kinase-like ATPases NZ30_04760 SM00388 His Kinase A (phosphoacceptor) domain NZ30_04765 SM00448 cheY-homologous receiver domain NZ30_04765 SM00862 Transcriptional regulatory protein, C terminal NZ30_04775 SM00829 Enoylreductase NZ30_04845 SM00450 Rhodanese Homology Domain NZ30_04875 SM00382 ATPases associated with a variety of cellular activities NZ30_04910 SM01154 NZ30_04910 NZ30_04920 SM00642 Alpha-amylase domain NZ30_04935 SM00354 helix_turn _helix lactose operon repressor NZ30_04940 SM00822 NZ30_04940 NZ30_04955 SM00448 cheY-homologous receiver domain NZ30_04955 SM00862 Transcriptional regulatory protein, C terminal NZ30_04960 SM00387 Histidine kinase-like ATPases NZ30_04960 SM00388 His Kinase A (phosphoacceptor) domain NZ30_04970 SM00421 helix_turn_helix, Lux Regulon NZ30_04970 SM00448 cheY-homologous receiver domain NZ30_04980 SM00387 Histidine kinase-like ATPases NZ30_04980 SM00388 His Kinase A (phosphoacceptor) domain NZ30_04980 SM00448 cheY-homologous receiver domain NZ30_04995 SM00919 Malic enzyme, NAD binding domain NZ30_04995 SM01274 NZ30_04995 NZ30_05000 SM00530 Helix-turn-helix XRE-family like proteins NZ30_05015 SM00382 ATPases associated with a variety of cellular activities NZ30_05020 SM00530 Helix-turn-helix XRE-family like proteins NZ30_05065 SM00267 diguanylate cyclase NZ30_05070 SM01329 NZ30_05070 NZ30_05090 SM00917 LeuA allosteric (dimerisation) domain NZ30_05115 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NZ30_05175 SM00464 Found in ATP-dependent protease La (LON) NZ30_05235 SM00421 helix_turn_helix, Lux Regulon NZ30_05300 SM00052 Putative diguanylate phosphodiesterase NZ30_05300 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) NZ30_05300 SM00091 PAS domain NZ30_05300 SM00267 diguanylate cyclase NZ30_05310 SM01011 Aminopeptidase P, N-terminal domain NZ30_05335 SM00842 Cell division protein FtsA NZ30_05355 SM00965 Secretin and TonB N terminus short domain NZ30_05360 SM00382 ATPases associated with a variety of cellular activities NZ30_05375 SM00327 von Willebrand factor (vWF) type A domain NZ30_05380 SM00028 Tetratricopeptide repeats NZ30_05380 SM00327 von Willebrand factor (vWF) type A domain NZ30_05395 SM00861 Transketolase, pyrimidine binding domain NZ30_05445 SM00903 Flavin reductase like domain NZ30_05450 SM00382 ATPases associated with a variety of cellular activities NZ30_05465 SM00849 Metallo-beta-lactamase superfamily NZ30_05470 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor NZ30_05475 SM00450 Rhodanese Homology Domain NZ30_05495 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NZ30_05550 SM00506 Appr-1"-p processing enzyme NZ30_05620 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. NZ30_05620 SM00387 Histidine kinase-like ATPases NZ30_05680 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NZ30_05680 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NZ30_05695 SM00645 Papain family cysteine protease NZ30_05710 SM00967 RNA 2'-O ribose methyltransferase substrate binding NZ30_05775 SM00869 Autotransporter beta-domain NZ30_05835 SM00448 cheY-homologous receiver domain NZ30_05835 SM00862 Transcriptional regulatory protein, C terminal NZ30_05840 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NZ30_05840 SM00387 Histidine kinase-like ATPases NZ30_05840 SM00388 His Kinase A (phosphoacceptor) domain NZ30_05880 SM00382 ATPases associated with a variety of cellular activities NZ30_05880 SM00448 cheY-homologous receiver domain NZ30_05885 SM00387 Histidine kinase-like ATPases NZ30_05885 SM00388 His Kinase A (phosphoacceptor) domain NZ30_05895 SM00881 CoA binding domain NZ30_05940 SM00382 ATPases associated with a variety of cellular activities NZ30_05970 SM00564 beta-propeller repeat NZ30_06030 SM00382 ATPases associated with a variety of cellular activities NZ30_06030 SM01086 C-terminal, D2-small domain, of ClpB protein NZ30_06135 SM00460 Transglutaminase/protease-like homologues NZ30_06150 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs NZ30_06150 SM00475 5'-3' exonuclease NZ30_06170 SM01002 Alanine dehydrogenase/PNT, C-terminal domain NZ30_06170 SM01003 Alanine dehydrogenase/PNT, N-terminal domain NZ30_06265 SM00530 Helix-turn-helix XRE-family like proteins NZ30_06270 SM00852 Probable molybdopterin binding domain NZ30_06275 SM01126 NZ30_06275 NZ30_06335 SM01126 NZ30_06335 NZ30_06465 SM01126 NZ30_06465 NZ30_06530 SM00257 Lysin motif NZ30_06615 SM00382 ATPases associated with a variety of cellular activities NZ30_06615 SM01086 C-terminal, D2-small domain, of ClpB protein NZ30_06755 SM00758 NZ30_06755 NZ30_06755 SM01217 NZ30_06755 NZ30_06770 SM00636 NZ30_06770 NZ30_06775 SM00812 Alpha-L-fucosidase NZ30_06825 SM00244 prohibitin homologues NZ30_06880 SM01126 NZ30_06880 NZ30_06905 SM00822 NZ30_06905 NZ30_07005 SM00116 Domain in cystathionine beta-synthase and other proteins. NZ30_07050 SM00267 diguanylate cyclase NZ30_07065 SM00867 YceI-like domain NZ30_07075 SM00867 YceI-like domain NZ30_07080 SM00387 Histidine kinase-like ATPases NZ30_07080 SM00388 His Kinase A (phosphoacceptor) domain NZ30_07080 SM00448 cheY-homologous receiver domain NZ30_07085 SM00387 Histidine kinase-like ATPases NZ30_07085 SM00388 His Kinase A (phosphoacceptor) domain NZ30_07085 SM00448 cheY-homologous receiver domain NZ30_07150 SM00422 helix_turn_helix, mercury resistance NZ30_07175 SM00382 ATPases associated with a variety of cellular activities NZ30_07200 SM00732 Likely ribonuclease with RNase H fold. NZ30_07225 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NZ30_07225 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NZ30_07260 SM00924 MgtE intracellular N domain NZ30_07305 SM00382 ATPases associated with a variety of cellular activities NZ30_07325 SM00116 Domain in cystathionine beta-synthase and other proteins. NZ30_07425 SM00448 cheY-homologous receiver domain NZ30_07425 SM00862 Transcriptional regulatory protein, C terminal NZ30_07460 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. NZ30_07490 SM00382 ATPases associated with a variety of cellular activities NZ30_07505 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain NZ30_07535 SM00411 bacterial (prokaryotic) histone like domain NZ30_07595 SM00530 Helix-turn-helix XRE-family like proteins NZ30_07630 SM00248 ankyrin repeats NZ30_07665 SM00855 Phosphoglycerate mutase family NZ30_07685 SM00342 helix_turn_helix, arabinose operon control protein NZ30_07700 SM00448 cheY-homologous receiver domain NZ30_07705 SM00138 Methyltransferase, chemotaxis proteins NZ30_07710 SM00052 Putative diguanylate phosphodiesterase NZ30_07710 SM00448 cheY-homologous receiver domain NZ30_07715 SM00260 Two component signalling adaptor domain NZ30_07720 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NZ30_07720 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NZ30_07725 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NZ30_07725 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NZ30_07735 SM00073 Histidine Phosphotransfer domain NZ30_07735 SM00260 Two component signalling adaptor domain NZ30_07735 SM00387 Histidine kinase-like ATPases NZ30_07735 SM01231 NZ30_07735 NZ30_07780 SM00387 Histidine kinase-like ATPases NZ30_07785 SM00645 Papain family cysteine protease NZ30_07855 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NZ30_07860 SM01092 CO dehydrogenase flavoprotein C-terminal domain NZ30_07895 SM00829 Enoylreductase NZ30_07915 SM00342 helix_turn_helix, arabinose operon control protein NZ30_07915 SM00478 endonuclease III NZ30_07915 SM01009 AlkA N-terminal domain NZ30_07960 SM00487 DEAD-like helicases superfamily NZ30_07960 SM00490 helicase superfamily c-terminal domain NZ30_07965 SM00363 S4 RNA-binding domain NZ30_07970 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. NZ30_07970 SM00267 diguanylate cyclase NZ30_08010 SM00382 ATPases associated with a variety of cellular activities NZ30_08120 SM00481 DNA polymerase alpha chain like domain NZ30_08155 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. NZ30_08185 SM00267 diguanylate cyclase NZ30_08210 SM00972 Spore Coat Protein U domain NZ30_08225 SM00972 Spore Coat Protein U domain NZ30_08235 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. NZ30_08260 SM01172 NZ30_08260 NZ30_08265 SM00710 Parallel beta-helix repeats NZ30_08265 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses NZ30_08280 SM00434 DNA Topoisomerase IV NZ30_08290 SM00347 helix_turn_helix multiple antibiotic resistance protein NZ30_08315 SM00530 Helix-turn-helix XRE-family like proteins NZ30_08340 SM00316 Ribosomal protein S1-like RNA-binding domain NZ30_08340 SM00357 Cold shock protein domain NZ30_08340 SM00955 NZ30_08340 NZ30_08350 SM00967 RNA 2'-O ribose methyltransferase substrate binding NZ30_08370 SM00479 NZ30_08370 NZ30_08395 SM00382 ATPases associated with a variety of cellular activities NZ30_08430 SM00947 Carbonic anhydrase NZ30_08440 SM00478 endonuclease III NZ30_08440 SM00525 NZ30_08440 NZ30_08465 SM00450 Rhodanese Homology Domain NZ30_08475 SM00644 NZ30_08475 NZ30_08500 SM00981 NZ30_08500 NZ30_08505 SM00448 cheY-homologous receiver domain NZ30_08505 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. NZ30_08510 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) NZ30_08510 SM00091 PAS domain NZ30_08510 SM00387 Histidine kinase-like ATPases NZ30_08510 SM00388 His Kinase A (phosphoacceptor) domain NZ30_08510 SM00448 cheY-homologous receiver domain NZ30_08510 SM01079 NZ30_08510 NZ30_08535 SM01002 Alanine dehydrogenase/PNT, C-terminal domain NZ30_08535 SM01003 Alanine dehydrogenase/PNT, N-terminal domain NZ30_08545 SM00530 Helix-turn-helix XRE-family like proteins NZ30_08590 SM01126 NZ30_08590 NZ30_08605 SM00267 diguanylate cyclase NZ30_08605 SM00448 cheY-homologous receiver domain NZ30_08615 SM01230 NZ30_08615 NZ30_08625 SM01230 NZ30_08625 NZ30_08660 SM00382 ATPases associated with a variety of cellular activities NZ30_08690 SM00116 Domain in cystathionine beta-synthase and other proteins. NZ30_08690 SM01091 Transporter associated domain NZ30_08710 SM00729 Elongator protein 3, MiaB family, Radical SAM NZ30_08775 SM01001 AIR carboxylase NZ30_08905 SM00479 NZ30_08905 NZ30_08930 SM00947 Carbonic anhydrase NZ30_08975 SM00421 helix_turn_helix, Lux Regulon NZ30_08975 SM00448 cheY-homologous receiver domain NZ30_09025 SM00968 SMC proteins Flexible Hinge Domain NZ30_09030 SM00771 ZipA, C-terminal domain (FtsZ-binding) NZ30_09040 SM00278 Helix-hairpin-helix DNA-binding motif class 1 NZ30_09040 SM00292 breast cancer carboxy-terminal domain NZ30_09040 SM00532 Ligase N family NZ30_09060 SM00434 DNA Topoisomerase IV NZ30_09115 SM00345 helix_turn_helix gluconate operon transcriptional repressor NZ30_09115 SM00866 NZ30_09115 NZ30_09120 SM00822 NZ30_09120 NZ30_09150 SM00240 Forkhead associated domain NZ30_09170 SM00830 Chorismate mutase type II NZ30_09320 SM00487 DEAD-like helicases superfamily NZ30_09320 SM00490 helicase superfamily c-terminal domain NZ30_09390 SM00382 ATPases associated with a variety of cellular activities NZ30_09395 SM00382 ATPases associated with a variety of cellular activities NZ30_09445 SM00382 ATPases associated with a variety of cellular activities NZ30_09475 SM00363 S4 RNA-binding domain NZ30_09500 SM00354 helix_turn _helix lactose operon repressor NZ30_09560 SM00382 ATPases associated with a variety of cellular activities NZ30_09605 SM00382 ATPases associated with a variety of cellular activities NZ30_09615 SM00849 Metallo-beta-lactamase superfamily NZ30_09630 SM00382 ATPases associated with a variety of cellular activities NZ30_09645 SM00226 Low molecular weight phosphatase family NZ30_09655 SM00278 Helix-hairpin-helix DNA-binding motif class 1 NZ30_09655 SM00465 GIY-YIG type nucleases (URI domain) NZ30_09705 SM00825 Beta-ketoacyl synthase NZ30_09745 SM00729 Elongator protein 3, MiaB family, Radical SAM NZ30_09755 SM00382 ATPases associated with a variety of cellular activities NZ30_09780 SM00421 helix_turn_helix, Lux Regulon NZ30_09780 SM00448 cheY-homologous receiver domain NZ30_09790 SM00316 Ribosomal protein S1-like RNA-binding domain NZ30_09795 SM00363 S4 RNA-binding domain NZ30_09885 SM00316 Ribosomal protein S1-like RNA-binding domain NZ30_09890 SM00411 bacterial (prokaryotic) histone like domain NZ30_09935 SM00562 NZ30_09935 NZ30_09945 SM00028 Tetratricopeptide repeats NZ30_09960 SM00564 beta-propeller repeat NZ30_09965 SM00382 ATPases associated with a variety of cellular activities NZ30_09975 SM00852 Probable molybdopterin binding domain NZ30_09980 SM00450 Rhodanese Homology Domain NZ30_10010 SM00116 Domain in cystathionine beta-synthase and other proteins. NZ30_10010 SM01240 NZ30_10010 NZ30_10020 SM00758 NZ30_10020 NZ30_10025 SM00382 ATPases associated with a variety of cellular activities NZ30_10030 SM00387 Histidine kinase-like ATPases NZ30_10030 SM00388 His Kinase A (phosphoacceptor) domain NZ30_10030 SM00448 cheY-homologous receiver domain NZ30_10040 SM00529 Helix-turn-helix diphteria tox regulatory element NZ30_10050 SM00479 NZ30_10050 NZ30_10125 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) NZ30_10125 SM00091 PAS domain NZ30_10125 SM00387 Histidine kinase-like ATPases NZ30_10125 SM00388 His Kinase A (phosphoacceptor) domain NZ30_10125 SM00448 cheY-homologous receiver domain NZ30_10130 SM00316 Ribosomal protein S1-like RNA-binding domain NZ30_10130 SM00732 Likely ribonuclease with RNase H fold. NZ30_10135 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. NZ30_10135 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) NZ30_10135 SM00091 PAS domain NZ30_10135 SM00387 Histidine kinase-like ATPases NZ30_10135 SM00388 His Kinase A (phosphoacceptor) domain NZ30_10135 SM00448 cheY-homologous receiver domain NZ30_10140 SM00448 cheY-homologous receiver domain NZ30_10225 SM00342 helix_turn_helix, arabinose operon control protein NZ30_10255 SM00823 Phosphopantetheine attachment site NZ30_10255 SM00824 Thioesterase NZ30_10285 SM00382 ATPases associated with a variety of cellular activities NZ30_10290 SM00923 MbtH-like protein NZ30_10310 SM01126 NZ30_10310 NZ30_10320 SM00155 Phospholipase D. Active site motifs. NZ30_10435 SM00851 MGS-like domain NZ30_10435 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NZ30_10445 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain NZ30_10640 SM00382 ATPases associated with a variety of cellular activities NZ30_10660 SM00382 ATPases associated with a variety of cellular activities NZ30_10660 SM00843 NZ30_10660 NZ30_10680 SM00316 Ribosomal protein S1-like RNA-binding domain NZ30_10685 SM00382 ATPases associated with a variety of cellular activities NZ30_10685 SM01086 C-terminal, D2-small domain, of ClpB protein NZ30_10715 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NZ30_10725 SM00382 ATPases associated with a variety of cellular activities NZ30_10735 SM00052 Putative diguanylate phosphodiesterase NZ30_10735 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) NZ30_10735 SM00091 PAS domain NZ30_10735 SM00267 diguanylate cyclase NZ30_10740 SM00091 PAS domain NZ30_10740 SM00387 Histidine kinase-like ATPases NZ30_10745 SM00052 Putative diguanylate phosphodiesterase NZ30_10745 SM00267 diguanylate cyclase NZ30_10745 SM00448 cheY-homologous receiver domain NZ30_10750 SM00387 Histidine kinase-like ATPases NZ30_10765 SM00858 NZ30_10765 NZ30_10770 SM00260 Two component signalling adaptor domain NZ30_10770 SM00448 cheY-homologous receiver domain NZ30_10815 SM00047 Lysozyme subfamily 2 NZ30_10855 SM00421 helix_turn_helix, Lux Regulon NZ30_10855 SM00448 cheY-homologous receiver domain NZ30_10865 SM00448 cheY-homologous receiver domain NZ30_10870 SM00382 ATPases associated with a variety of cellular activities NZ30_10890 SM00822 NZ30_10890 NZ30_10895 SM00822 NZ30_10895 NZ30_10955 SM00382 ATPases associated with a variety of cellular activities NZ30_11010 SM00267 diguanylate cyclase NZ30_11025 SM00382 ATPases associated with a variety of cellular activities NZ30_11025 SM00962 SRP54-type protein, GTPase domain NZ30_11040 SM00448 cheY-homologous receiver domain NZ30_11050 SM00073 Histidine Phosphotransfer domain NZ30_11050 SM00260 Two component signalling adaptor domain NZ30_11050 SM00387 Histidine kinase-like ATPases NZ30_11050 SM01231 NZ30_11050 NZ30_11070 SM00260 Two component signalling adaptor domain NZ30_11080 SM00448 cheY-homologous receiver domain NZ30_11085 SM00073 Histidine Phosphotransfer domain NZ30_11085 SM00260 Two component signalling adaptor domain NZ30_11085 SM00387 Histidine kinase-like ATPases NZ30_11085 SM01231 NZ30_11085 NZ30_11095 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NZ30_11095 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NZ30_11100 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NZ30_11100 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NZ30_11105 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NZ30_11105 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NZ30_11110 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NZ30_11110 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NZ30_11120 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NZ30_11125 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NZ30_11125 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NZ30_11130 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NZ30_11130 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NZ30_11135 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NZ30_11135 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NZ30_11145 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NZ30_11155 SM00260 Two component signalling adaptor domain NZ30_11165 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NZ30_11165 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NZ30_11175 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NZ30_11175 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NZ30_11180 SM00138 Methyltransferase, chemotaxis proteins NZ30_11190 SM00448 cheY-homologous receiver domain NZ30_11195 SM00052 Putative diguanylate phosphodiesterase NZ30_11195 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. NZ30_11195 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) NZ30_11195 SM00091 PAS domain NZ30_11195 SM00267 diguanylate cyclase NZ30_11215 SM00966 SpoVT / AbrB like domain NZ30_11240 SM00073 Histidine Phosphotransfer domain NZ30_11240 SM00387 Histidine kinase-like ATPases NZ30_11240 SM00388 His Kinase A (phosphoacceptor) domain NZ30_11240 SM00448 cheY-homologous receiver domain NZ30_11245 SM00448 cheY-homologous receiver domain NZ30_11245 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. NZ30_11255 SM00937 NZ30_11255 NZ30_11280 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain NZ30_11305 SM01130 NZ30_11305 NZ30_11320 SM00670 Large family of predicted nucleotide-binding domains NZ30_11375 SM00642 Alpha-amylase domain NZ30_11395 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain NZ30_11405 SM00382 ATPases associated with a variety of cellular activities NZ30_11445 SM00382 ATPases associated with a variety of cellular activities NZ30_11455 SM01103 NZ30_11455 NZ30_11470 SM00257 Lysin motif NZ30_11490 SM00463 Small MutS-related domain NZ30_11515 SM01192 NZ30_11515 NZ30_11515 SM01193 NZ30_11515 NZ30_11540 SM00387 Histidine kinase-like ATPases NZ30_11540 SM00433 TopoisomeraseII NZ30_11565 SM01091 Transporter associated domain NZ30_11585 SM00450 Rhodanese Homology Domain NZ30_11605 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. NZ30_11605 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) NZ30_11605 SM00091 PAS domain NZ30_11605 SM00267 diguanylate cyclase NZ30_11615 SM00984 UDP binding domain NZ30_11625 SM00354 helix_turn _helix lactose operon repressor NZ30_11650 SM00448 cheY-homologous receiver domain NZ30_11650 SM00862 Transcriptional regulatory protein, C terminal NZ30_11655 SM00387 Histidine kinase-like ATPases NZ30_11655 SM00388 His Kinase A (phosphoacceptor) domain NZ30_11670 SM00382 ATPases associated with a variety of cellular activities NZ30_11730 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor NZ30_11740 SM01018 B12 binding domain NZ30_11765 SM00984 UDP binding domain NZ30_11785 SM00345 helix_turn_helix gluconate operon transcriptional repressor NZ30_11790 SM00382 ATPases associated with a variety of cellular activities NZ30_11840 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. NZ30_11850 SM00861 Transketolase, pyrimidine binding domain NZ30_11870 SM00052 Putative diguanylate phosphodiesterase NZ30_11870 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. NZ30_11870 SM00267 diguanylate cyclase NZ30_11890 SM00382 ATPases associated with a variety of cellular activities NZ30_11910 SM00271 DnaJ molecular chaperone homology domain NZ30_11970 SM00822 NZ30_11970 NZ30_12015 SM00382 ATPases associated with a variety of cellular activities NZ30_12060 SM00357 Cold shock protein domain NZ30_12105 SM00382 ATPases associated with a variety of cellular activities NZ30_12130 SM00347 helix_turn_helix multiple antibiotic resistance protein NZ30_12160 SM00631 NZ30_12160 NZ30_12165 SM01217 NZ30_12165 NZ30_12190 SM00382 ATPases associated with a variety of cellular activities NZ30_12195 SM00487 DEAD-like helicases superfamily NZ30_12195 SM00490 helicase superfamily c-terminal domain NZ30_12235 SM00357 Cold shock protein domain NZ30_12245 SM01322 NZ30_12245 NZ30_12255 SM00052 Putative diguanylate phosphodiesterase NZ30_12255 SM00091 PAS domain NZ30_12255 SM00267 diguanylate cyclase NZ30_12270 SM00822 NZ30_12270 NZ30_12290 SM00853 MutL C terminal dimerisation domain NZ30_12290 SM01340 NZ30_12290 NZ30_12295 SM00646 NZ30_12295 NZ30_12360 SM00507 HNH nucleases NZ30_12365 SM00861 Transketolase, pyrimidine binding domain NZ30_12435 SM00422 helix_turn_helix, mercury resistance NZ30_12440 SM00411 bacterial (prokaryotic) histone like domain NZ30_12445 SM00873 B3/4 domain NZ30_12445 SM00874 tRNA synthetase B5 domain NZ30_12445 SM00896 Ferredoxin-fold anticodon binding domain NZ30_12470 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain NZ30_12485 SM00899 NZ30_12485 NZ30_12505 SM00841 Elongation factor P, C-terminal NZ30_12505 SM01185 NZ30_12505 NZ30_12555 SM01007 Class II Aldolase and Adducin N-terminal domain NZ30_12630 SM00100 Cyclic nucleotide-monophosphate binding domain NZ30_12630 SM00419 helix_turn_helix, cAMP Regulatory protein NZ30_12720 SM00232 JAB/MPN domain NZ30_13075 SM00014 Acid phosphatase homologues NZ30_13085 SM00387 Histidine kinase-like ATPases NZ30_13090 SM00448 cheY-homologous receiver domain NZ30_13095 SM00052 Putative diguanylate phosphodiesterase NZ30_13095 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. NZ30_13095 SM00267 diguanylate cyclase NZ30_13200 SM00646 NZ30_13200 NZ30_13240 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase NZ30_13260 SM00859 Semialdehyde dehydrogenase, NAD binding domain NZ30_13295 SM00840 NZ30_13295 NZ30_13335 SM00564 beta-propeller repeat NZ30_13420 SM00841 Elongation factor P, C-terminal NZ30_13420 SM01185 NZ30_13420 NZ30_13430 SM00052 Putative diguanylate phosphodiesterase NZ30_13430 SM00267 diguanylate cyclase NZ30_13430 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NZ30_13460 SM01323 NZ30_13460 NZ30_13475 SM00344 helix_turn_helix ASNC type NZ30_13500 SM00849 Metallo-beta-lactamase superfamily NZ30_13530 SM00387 Histidine kinase-like ATPases NZ30_13625 SM01130 NZ30_13625 NZ30_13650 SM00342 helix_turn_helix, arabinose operon control protein NZ30_13655 SM00382 ATPases associated with a variety of cellular activities NZ30_13655 SM00962 SRP54-type protein, GTPase domain NZ30_13655 SM00963 SRP54-type protein, helical bundle domain NZ30_13660 SM00478 endonuclease III NZ30_13685 SM00474 3'-5' exonuclease NZ30_13690 SM00528 Domain in histone-like proteins of HNS family NZ30_13720 SM00260 Two component signalling adaptor domain NZ30_13725 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NZ30_13730 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NZ30_13730 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NZ30_13750 SM00052 Putative diguanylate phosphodiesterase NZ30_13750 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. NZ30_13755 SM00316 Ribosomal protein S1-like RNA-binding domain NZ30_13755 SM00322 K homology RNA-binding domain NZ30_13760 SM01387 NZ30_13760 NZ30_13780 SM00316 Ribosomal protein S1-like RNA-binding domain NZ30_13780 SM00322 K homology RNA-binding domain NZ30_13830 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NZ30_13835 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region NZ30_13880 SM00822 NZ30_13880 NZ30_13885 SM01126 NZ30_13885 NZ30_13950 SM00859 Semialdehyde dehydrogenase, NAD binding domain NZ30_13980 SM00257 Lysin motif NZ30_14055 SM00028 Tetratricopeptide repeats NZ30_14085 SM01160 NZ30_14085 NZ30_14165 SM00098 Alkaline phosphatase homologues NZ30_14175 SM00977 TilS substrate C-terminal domain NZ30_14190 SM00448 cheY-homologous receiver domain NZ30_14190 SM00862 Transcriptional regulatory protein, C terminal NZ30_14225 SM00331 Sigma factor PP2C-like phosphatases NZ30_14225 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain NZ30_14250 SM00240 Forkhead associated domain NZ30_14275 SM00382 ATPases associated with a variety of cellular activities NZ30_14275 SM01086 C-terminal, D2-small domain, of ClpB protein NZ30_14340 SM00316 Ribosomal protein S1-like RNA-binding domain NZ30_14605 SM00052 Putative diguanylate phosphodiesterase NZ30_14635 SM00363 S4 RNA-binding domain NZ30_14655 SM00387 Histidine kinase-like ATPases NZ30_14655 SM00388 His Kinase A (phosphoacceptor) domain NZ30_14660 SM00564 beta-propeller repeat NZ30_14665 SM00345 helix_turn_helix gluconate operon transcriptional repressor NZ30_14665 SM00895 NZ30_14665 NZ30_14740 SM00944 Pro-kumamolisin, activation domain NZ30_14745 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NZ30_14750 SM00869 Autotransporter beta-domain NZ30_14780 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. NZ30_14780 SM00267 diguanylate cyclase NZ30_14805 SM00487 DEAD-like helicases superfamily NZ30_14805 SM00490 helicase superfamily c-terminal domain NZ30_14820 SM00357 Cold shock protein domain NZ30_14845 SM01118 NZ30_14845 NZ30_14855 SM00448 cheY-homologous receiver domain NZ30_14870 SM00358 Double-stranded RNA binding motif NZ30_14870 SM00535 Ribonuclease III family NZ30_14885 SM00838 Elongation factor G C-terminus NZ30_14890 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. NZ30_14930 SM00812 Alpha-L-fucosidase NZ30_14935 SM00533 DNA-binding domain of DNA mismatch repair MUTS family NZ30_14935 SM00534 ATPase domain of DNA mismatch repair MUTS family NZ30_14955 SM00363 S4 RNA-binding domain NZ30_15000 SM00382 ATPases associated with a variety of cellular activities NZ30_15000 SM00962 SRP54-type protein, GTPase domain NZ30_15000 SM00963 SRP54-type protein, helical bundle domain NZ30_15015 SM00813 Alpha-L-arabinofuranosidase C-terminus NZ30_15060 SM00382 ATPases associated with a variety of cellular activities NZ30_15115 SM00342 helix_turn_helix, arabinose operon control protein NZ30_15130 SM00382 ATPases associated with a variety of cellular activities NZ30_15215 SM00862 Transcriptional regulatory protein, C terminal NZ30_15245 SM00382 ATPases associated with a variety of cellular activities NZ30_15305 SM00904 Riboflavin kinase NZ30_15370 SM00054 EF-hand, calcium binding motif NZ30_15395 SM00244 prohibitin homologues NZ30_15435 SM00954 Region found in RelA / SpoT proteins NZ30_15475 SM00382 ATPases associated with a variety of cellular activities NZ30_15475 SM00487 DEAD-like helicases superfamily NZ30_15475 SM00490 helicase superfamily c-terminal domain NZ30_15475 SM00847 Helicase associated domain (HA2) Add an annotation NZ30_15485 SM00341 Helicase and RNase D C-terminal NZ30_15485 SM00487 DEAD-like helicases superfamily NZ30_15485 SM00490 helicase superfamily c-terminal domain NZ30_15485 SM00956 NZ30_15485 NZ30_15515 SM00028 Tetratricopeptide repeats NZ30_15550 SM00382 ATPases associated with a variety of cellular activities NZ30_15560 SM00278 Helix-hairpin-helix DNA-binding motif class 1 NZ30_15580 SM00458 Ricin-type beta-trefoil NZ30_15600 SM00834 Putative regulatory protein NZ30_15625 SM00260 Two component signalling adaptor domain NZ30_15635 SM00073 Histidine Phosphotransfer domain NZ30_15635 SM00260 Two component signalling adaptor domain NZ30_15635 SM00387 Histidine kinase-like ATPases NZ30_15635 SM00448 cheY-homologous receiver domain NZ30_15635 SM01231 NZ30_15635 NZ30_15640 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NZ30_15645 SM00260 Two component signalling adaptor domain NZ30_15650 SM00448 cheY-homologous receiver domain NZ30_15655 SM00448 cheY-homologous receiver domain NZ30_15680 SM00491 NZ30_15680 NZ30_15700 SM00478 endonuclease III NZ30_15715 SM00421 helix_turn_helix, Lux Regulon NZ30_15715 SM00448 cheY-homologous receiver domain NZ30_15755 SM00387 Histidine kinase-like ATPases NZ30_15755 SM00388 His Kinase A (phosphoacceptor) domain NZ30_15760 SM00448 cheY-homologous receiver domain NZ30_15760 SM00862 Transcriptional regulatory protein, C terminal NZ30_15795 SM00382 ATPases associated with a variety of cellular activities NZ30_15820 SM01060 NZ30_15820 NZ30_15855 SM01068 Putative carbohydrate binding domain NZ30_15925 SM00788 Adenylosuccinate synthetase NZ30_15935 SM00244 prohibitin homologues NZ30_15940 SM00244 prohibitin homologues NZ30_15945 SM00829 Enoylreductase NZ30_15950 SM00448 cheY-homologous receiver domain NZ30_15955 SM00271 DnaJ molecular chaperone homology domain NZ30_15995 SM01359 NZ30_15995 NZ30_15995 SM01360 NZ30_15995 NZ30_16035 SM00354 helix_turn _helix lactose operon repressor NZ30_16045 SM00345 helix_turn_helix gluconate operon transcriptional repressor NZ30_16045 SM00866 NZ30_16045 NZ30_16100 SM00387 Histidine kinase-like ATPases NZ30_16100 SM00388 His Kinase A (phosphoacceptor) domain NZ30_16100 SM00448 cheY-homologous receiver domain NZ30_16105 SM00448 cheY-homologous receiver domain NZ30_16110 SM00387 Histidine kinase-like ATPases NZ30_16110 SM00388 His Kinase A (phosphoacceptor) domain NZ30_16120 SM00749 bacterial OsmY and nodulation domain NZ30_16130 SM01350 NZ30_16130 NZ30_16150 SM00563 Phosphate acyltransferases NZ30_16190 SM00996 S-adenosyl-L-homocysteine hydrolase NZ30_16190 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NZ30_16240 SM00957 SecA DEAD-like domain NZ30_16240 SM00958 SecA preprotein cross-linking domain NZ30_16260 SM00864 Tubulin/FtsZ family, GTPase domain NZ30_16260 SM00865 Tubulin/FtsZ family, C-terminal domain NZ30_16265 SM00842 Cell division protein FtsA NZ30_16365 SM00448 cheY-homologous receiver domain NZ30_16365 SM00862 Transcriptional regulatory protein, C terminal NZ30_16370 SM00387 Histidine kinase-like ATPases NZ30_16370 SM00388 His Kinase A (phosphoacceptor) domain NZ30_16405 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain NZ30_16470 SM00530 Helix-turn-helix XRE-family like proteins NZ30_16480 SM00382 ATPases associated with a variety of cellular activities NZ30_16570 SM00345 helix_turn_helix gluconate operon transcriptional repressor NZ30_16570 SM00866 NZ30_16570 NZ30_16630 SM00382 ATPases associated with a variety of cellular activities NZ30_16650 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NZ30_16650 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NZ30_16655 SM01211 NZ30_16655 NZ30_16745 SM00528 Domain in histone-like proteins of HNS family NZ30_16760 SM00382 ATPases associated with a variety of cellular activities NZ30_16790 SM00882 Coenzyme A transferase NZ30_16795 SM00882 Coenzyme A transferase NZ30_16830 SM00893 Electron transfer flavoprotein domain NZ30_16835 SM00893 Electron transfer flavoprotein domain NZ30_16930 SM00382 ATPases associated with a variety of cellular activities NZ30_16945 SM00116 Domain in cystathionine beta-synthase and other proteins. NZ30_16980 SM00487 DEAD-like helicases superfamily NZ30_16980 SM00490 helicase superfamily c-terminal domain NZ30_17030 SM00825 Beta-ketoacyl synthase NZ30_17060 SM00422 helix_turn_helix, mercury resistance NZ30_17100 SM00382 ATPases associated with a variety of cellular activities NZ30_17130 SM00382 ATPases associated with a variety of cellular activities NZ30_17130 SM00448 cheY-homologous receiver domain NZ30_17135 SM00387 Histidine kinase-like ATPases NZ30_17155 SM00830 Chorismate mutase type II NZ30_17165 SM00382 ATPases associated with a variety of cellular activities NZ30_17225 SM00986 Uracil DNA glycosylase superfamily NZ30_17225 SM00987 UreE urease accessory protein, C-terminal domain NZ30_17250 SM00382 ATPases associated with a variety of cellular activities NZ30_17250 SM00930 NZ30_17250 NZ30_17295 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) NZ30_17295 SM00091 PAS domain NZ30_17295 SM00387 Histidine kinase-like ATPases NZ30_17295 SM00388 His Kinase A (phosphoacceptor) domain NZ30_17295 SM00448 cheY-homologous receiver domain NZ30_17310 SM01005 Alanine racemase, C-terminal domain NZ30_17320 SM00344 helix_turn_helix ASNC type NZ30_17365 SM00060 Fibronectin type 3 domain NZ30_17365 SM00944 Pro-kumamolisin, activation domain NZ30_17385 SM00382 ATPases associated with a variety of cellular activities NZ30_17400 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. NZ30_17405 SM00986 Uracil DNA glycosylase superfamily NZ30_17405 SM00987 UreE urease accessory protein, C-terminal domain NZ30_17410 SM00729 Elongator protein 3, MiaB family, Radical SAM NZ30_17455 SM00822 NZ30_17455 NZ30_17460 SM00849 Metallo-beta-lactamase superfamily NZ30_17475 SM00267 diguanylate cyclase NZ30_17485 SM00052 Putative diguanylate phosphodiesterase NZ30_17485 SM00091 PAS domain NZ30_17485 SM00267 diguanylate cyclase NZ30_17555 SM00448 cheY-homologous receiver domain NZ30_17555 SM00850 LytTr DNA-binding domain NZ30_17630 SM00342 helix_turn_helix, arabinose operon control protein NZ30_17735 SM01126 NZ30_17735 NZ30_17755 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NZ30_17755 SM00331 Sigma factor PP2C-like phosphatases NZ30_17770 SM00867 YceI-like domain NZ30_17785 SM00944 Pro-kumamolisin, activation domain NZ30_17835 SM00883 Chaperonin 10 Kd subunit NZ30_17870 SM00878 Biotin carboxylase C-terminal domain NZ30_17895 SM00530 Helix-turn-helix XRE-family like proteins NZ30_17925 SM00563 Phosphate acyltransferases NZ30_17950 SM00798 AICARFT/IMPCHase bienzyme NZ30_17950 SM00851 MGS-like domain NZ30_17955 SM01209 NZ30_17955 NZ30_17955 SM01210 NZ30_17955 NZ30_17975 SM00563 Phosphate acyltransferases NZ30_18030 SM00052 Putative diguanylate phosphodiesterase NZ30_18030 SM00267 diguanylate cyclase NZ30_18030 SM00448 cheY-homologous receiver domain NZ30_18035 SM00387 Histidine kinase-like ATPases NZ30_18035 SM00388 His Kinase A (phosphoacceptor) domain NZ30_18035 SM00448 cheY-homologous receiver domain NZ30_18095 SM00100 Cyclic nucleotide-monophosphate binding domain NZ30_18095 SM00419 helix_turn_helix, cAMP Regulatory protein NZ30_18135 SM00046 Diacylglycerol kinase catalytic domain (presumed) NZ30_18150 SM00271 DnaJ molecular chaperone homology domain NZ30_18225 SM00347 helix_turn_helix multiple antibiotic resistance protein NZ30_18260 SM00861 Transketolase, pyrimidine binding domain NZ30_18265 SM00326 Src homology 3 domains NZ30_18300 SM01126 NZ30_18300 NZ30_18310 SM00487 DEAD-like helicases superfamily NZ30_18310 SM00490 helicase superfamily c-terminal domain NZ30_18330 SM00267 diguanylate cyclase NZ30_18340 SM01120 NZ30_18340 NZ30_18360 SM00829 Enoylreductase NZ30_18370 SM00965 Secretin and TonB N terminus short domain NZ30_18395 SM00345 helix_turn_helix gluconate operon transcriptional repressor NZ30_18395 SM00895 NZ30_18395 NZ30_18405 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. NZ30_18440 SM00346 helix_turn_helix isocitrate lyase regulation NZ30_18460 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain NZ30_18515 SM00420 helix_turn_helix, Deoxyribose operon repressor NZ30_18515 SM01134 NZ30_18515 NZ30_18550 SM00563 Phosphate acyltransferases NZ30_18650 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. NZ30_18685 SM01060 NZ30_18685 NZ30_18710 SM00382 ATPases associated with a variety of cellular activities NZ30_18745 SM00849 Metallo-beta-lactamase superfamily NZ30_18815 SM00387 Histidine kinase-like ATPases NZ30_18820 SM00448 cheY-homologous receiver domain NZ30_18820 SM00862 Transcriptional regulatory protein, C terminal NZ30_18870 SM00448 cheY-homologous receiver domain NZ30_18870 SM00862 Transcriptional regulatory protein, C terminal NZ30_18875 SM00387 Histidine kinase-like ATPases NZ30_18935 SM00347 helix_turn_helix multiple antibiotic resistance protein NZ30_18960 SM00833 Cobalamin synthesis protein cobW C-terminal domain NZ30_18995 SM00878 Biotin carboxylase C-terminal domain NZ30_19010 SM00881 CoA binding domain NZ30_19025 SM00448 cheY-homologous receiver domain NZ30_19025 SM00862 Transcriptional regulatory protein, C terminal NZ30_19030 SM00387 Histidine kinase-like ATPases NZ30_19030 SM00388 His Kinase A (phosphoacceptor) domain NZ30_19045 SM00248 ankyrin repeats NZ30_19055 SM00825 Beta-ketoacyl synthase NZ30_19075 SM00822 NZ30_19075 NZ30_19105 SM00563 Phosphate acyltransferases NZ30_19180 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs NZ30_19180 SM00474 3'-5' exonuclease NZ30_19180 SM00475 5'-3' exonuclease NZ30_19180 SM00482 DNA polymerase A domain NZ30_19200 SM01266 NZ30_19200 NZ30_19225 SM00155 Phospholipase D. Active site motifs. NZ30_19255 SM01321 NZ30_19255 NZ30_19260 SM01259 NZ30_19260 NZ30_19275 SM00470 ParB-like nuclease domain NZ30_19340 SM00421 helix_turn_helix, Lux Regulon NZ30_19340 SM00448 cheY-homologous receiver domain NZ30_19350 SM00091 PAS domain NZ30_19350 SM00387 Histidine kinase-like ATPases NZ30_19350 SM00388 His Kinase A (phosphoacceptor) domain NZ30_19350 SM00448 cheY-homologous receiver domain NZ30_19465 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family NZ30_19480 SM00354 helix_turn _helix lactose operon repressor NZ30_19490 SM00563 Phosphate acyltransferases NZ30_19530 SM00633 Glycosyl hydrolase family 10 NZ30_19540 SM00633 Glycosyl hydrolase family 10 NZ30_19590 SM00354 helix_turn _helix lactose operon repressor NZ30_19660 SM00382 ATPases associated with a variety of cellular activities NZ30_19675 SM00836 DALR anticodon binding domain NZ30_19690 SM00671 Sel1-like repeats. NZ30_19720 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain NZ30_19720 SM01232 NZ30_19720 NZ30_19735 SM00382 ATPases associated with a variety of cellular activities