locus-tag class description KM547_00005 PF00308 Bacterial dnaA protein KM547_00005 PF08299 Bacterial dnaA protein helix-turn-helix KM547_00005 PF11638 DnaA N-terminal domain KM547_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain KM547_00010 PF02767 DNA polymerase III beta subunit, central domain KM547_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain KM547_00015 PF02463 RecF/RecN/SMC N terminal domain KM547_00020 PF00204 DNA gyrase B KM547_00020 PF00986 DNA gyrase B subunit, carboxyl terminus KM547_00020 PF18053 DNA gyrase B subunit insert domain KM547_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM547_00020 PF01751 Toprim domain KM547_00025 PF02517 CPBP intramembrane metalloprotease KM547_00030 PF01435 Peptidase family M48 KM547_00040 PF03544 Gram-negative bacterial TonB protein C-terminal KM547_00045 PF01618 MotA/TolQ/ExbB proton channel family KM547_00050 PF02472 Biopolymer transport protein ExbD/TolR KM547_00055 PF02472 Biopolymer transport protein ExbD/TolR KM547_00060 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ KM547_00070 PF13091 PLD-like domain KM547_00070 PF13396 Phospholipase_D-nuclease N-terminal KM547_00075 PF04055 Radical SAM superfamily KM547_00085 PF01810 LysE type translocator KM547_00095 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain KM547_00100 PF00155 Aminotransferase class I and II KM547_00105 PF07715 TonB-dependent Receptor Plug Domain KM547_00105 PF00593 TonB dependent receptor KM547_00120 PF00171 Aldehyde dehydrogenase family KM547_00125 PF08240 Alcohol dehydrogenase GroES-like domain KM547_00125 PF00107 Zinc-binding dehydrogenase KM547_00145 PF02735 Ku70/Ku80 beta-barrel domain KM547_00155 PF01070 FMN-dependent dehydrogenase KM547_00160 PF00392 Bacterial regulatory proteins, gntR family KM547_00160 PF07729 FCD domain KM547_00170 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase KM547_00170 PF07055 Enoyl reductase FAD binding domain KM547_00170 PF12241 Trans-2-enoyl-CoA reductase catalytic region KM547_00180 PF00294 pfkB family carbohydrate kinase KM547_00205 PF05598 Transposase domain (DUF772) KM547_00225 PF02677 Epoxyqueuosine reductase QueH KM547_00250 PF07715 TonB-dependent Receptor Plug Domain KM547_00250 PF00593 TonB dependent receptor KM547_00265 PF00135 Carboxylesterase family KM547_00280 PF03480 Bacterial extracellular solute-binding protein, family 7 KM547_00290 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component KM547_00295 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain KM547_00295 PF04616 Glycosyl hydrolases family 43 KM547_00300 PF00356 Bacterial regulatory proteins, lacI family KM547_00310 PF04962 KduI/IolB family KM547_00330 PF00351 Biopterin-dependent aromatic amino acid hydroxylase KM547_00335 PF01037 Lrp/AsnC ligand binding domain KM547_00340 PF01734 Patatin-like phospholipase KM547_00350 PF01569 PAP2 superfamily KM547_00355 PF01569 PAP2 superfamily KM547_00365 PF03741 Integral membrane protein TerC family KM547_00370 PF17785 PUA-like domain KM547_00370 PF10672 S-adenosylmethionine-dependent methyltransferase KM547_00400 PF01037 Lrp/AsnC ligand binding domain KM547_00405 PF07715 TonB-dependent Receptor Plug Domain KM547_00405 PF00593 TonB dependent receptor KM547_00410 PF13520 Amino acid permease KM547_00415 PF01425 Amidase KM547_00490 PF00083 Sugar (and other) transporter KM547_00495 PF01227 GTP cyclohydrolase I KM547_00520 PF01925 Sulfite exporter TauE/SafE KM547_00525 PF02810 SEC-C motif KM547_00535 PF00990 Diguanylate cyclase, GGDEF domain KM547_00540 PF13406 Transglycosylase SLT domain KM547_00545 PF07690 Major Facilitator Superfamily KM547_00550 PF01126 Heme oxygenase KM547_00555 PF00360 Phytochrome region KM547_00555 PF13426 PAS domain KM547_00555 PF01590 GAF domain KM547_00555 PF08446 PAS fold KM547_00605 PF02142 MGS-like domain KM547_00610 PF00150 Cellulase (glycosyl hydrolase family 5) KM547_00615 PF00150 Cellulase (glycosyl hydrolase family 5) KM547_00620 PF00150 Cellulase (glycosyl hydrolase family 5) KM547_00625 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM547_00625 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KM547_00630 PF01645 Conserved region in glutamate synthase KM547_00630 PF04898 Glutamate synthase central domain KM547_00630 PF00310 Glutamine amidotransferases class-II KM547_00630 PF01493 GXGXG motif KM547_00680 PF00270 DEAD/DEAH box helicase KM547_00680 PF00271 Helicase conserved C-terminal domain KM547_00680 PF09369 Domain of unknown function (DUF1998) KM547_00715 PF00083 Sugar (and other) transporter KM547_00770 PF13614 AAA domain KM547_00785 PF13091 PLD-like domain KM547_00790 PF03061 Thioesterase superfamily KM547_00800 PF12146 Serine aminopeptidase, S33 KM547_00815 PF01161 Phosphatidylethanolamine-binding protein KM547_00820 PF02673 Bacitracin resistance protein BacA KM547_00825 PF00120 Glutamine synthetase, catalytic domain KM547_00825 PF03951 Glutamine synthetase, beta-Grasp domain KM547_00830 PF00543 Nitrogen regulatory protein P-II KM547_00835 PF00909 Ammonium Transporter Family KM547_00840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM547_00840 PF00512 His Kinase A (phospho-acceptor) domain KM547_00840 PF00989 PAS fold KM547_00845 PF02954 Bacterial regulatory protein, Fis family KM547_00845 PF00158 Sigma-54 interaction domain KM547_00845 PF00072 Response regulator receiver domain KM547_00850 PF00080 Copper/zinc superoxide dismutase (SODC) KM547_00855 PF00080 Copper/zinc superoxide dismutase (SODC) KM547_00865 PF00108 Thiolase, N-terminal domain KM547_00865 PF02803 Thiolase, C-terminal domain KM547_00905 PF02556 Preprotein translocase subunit SecB KM547_00910 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KM547_00910 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KM547_00920 PF00588 SpoU rRNA Methylase family KM547_00930 PF00675 Insulinase (Peptidase family M16) KM547_00930 PF05193 Peptidase M16 inactive domain KM547_00940 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KM547_00940 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KM547_00945 PF02661 Fic/DOC family KM547_00945 PF13784 Fic/DOC family N-terminal KM547_00950 PF01555 DNA methylase KM547_00960 PF00561 alpha/beta hydrolase fold KM547_00970 PF03692 Putative zinc- or iron-chelating domain KM547_00975 PF00501 AMP-binding enzyme KM547_00985 PF00144 Beta-lactamase KM547_00990 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family KM547_01000 PF07478 D-ala D-ala ligase C-terminus KM547_01000 PF01820 D-ala D-ala ligase N-terminus KM547_01010 PF03109 ABC1 family KM547_01020 PF11412 Disulphide bond corrector protein DsbC KM547_01020 PF02683 Cytochrome C biogenesis protein transmembrane region KM547_01025 PF00849 RNA pseudouridylate synthase KM547_01035 PF00472 RF-1 domain KM547_01050 PF10502 Signal peptidase, peptidase S26 KM547_01060 PF12833 Helix-turn-helix domain KM547_01070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM547_01070 PF03466 LysR substrate binding domain KM547_01075 PF01274 Malate synthase KM547_01080 PF00463 Isocitrate lyase family KM547_01085 PF00990 Diguanylate cyclase, GGDEF domain KM547_01085 PF08448 PAS fold KM547_01095 PF05598 Transposase domain (DUF772) KM547_01110 PF01740 STAS domain KM547_01110 PF00916 Sulfate permease family KM547_01140 PF12146 Serine aminopeptidase, S33 KM547_01145 PF00107 Zinc-binding dehydrogenase KM547_01145 PF16884 N-terminal domain of oxidoreductase KM547_01150 PF00248 Aldo/keto reductase family KM547_01160 PF00849 RNA pseudouridylate synthase KM547_01180 PF01026 TatD related DNase KM547_01195 PF04972 BON domain KM547_01195 PF00691 OmpA family KM547_01225 PF00437 Type II/IV secretion system protein KM547_01230 PF03958 Bacterial type II/III secretion system short domain KM547_01230 PF00263 Bacterial type II and III secretion system protein KM547_01270 PF01061 ABC-2 type transporter KM547_01275 PF00005 ABC transporter KM547_01280 PF00175 Oxidoreductase NAD-binding domain KM547_01280 PF00111 2Fe-2S iron-sulfur cluster binding domain KM547_01280 PF00970 Oxidoreductase FAD-binding domain KM547_01290 PF01381 Helix-turn-helix KM547_01295 PF00561 alpha/beta hydrolase fold KM547_01300 PF00005 ABC transporter KM547_01315 PF03350 Uncharacterized protein family, UPF0114 KM547_01320 PF00043 Glutathione S-transferase, C-terminal domain KM547_01320 PF02798 Glutathione S-transferase, N-terminal domain KM547_01325 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region KM547_01325 PF00326 Prolyl oligopeptidase family KM547_01370 PF04610 TrbL/VirB6 plasmid conjugal transfer protein KM547_01390 PF00490 Delta-aminolevulinic acid dehydratase KM547_01400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM547_01400 PF03466 LysR substrate binding domain KM547_01410 PF00175 Oxidoreductase NAD-binding domain KM547_01410 PF00667 FAD binding domain KM547_01410 PF00258 Flavodoxin KM547_01415 PF04052 TolB amino-terminal domain KM547_01415 PF07676 WD40-like Beta Propeller Repeat KM547_01420 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KM547_01420 PF01488 Shikimate / quinate 5-dehydrogenase KM547_01420 PF08501 Shikimate dehydrogenase substrate binding domain KM547_01430 PF06733 DEAD_2 KM547_01430 PF13307 Helicase C-terminal domain KM547_01440 PF00199 Catalase KM547_01440 PF06628 Catalase-related immune-responsive KM547_01455 PF00326 Prolyl oligopeptidase family KM547_01475 PF01594 AI-2E family transporter KM547_01495 PF07995 Glucose / Sorbosone dehydrogenase KM547_01515 PF13673 Acetyltransferase (GNAT) domain KM547_01515 PF04229 GrpB protein KM547_01530 PF00072 Response regulator receiver domain KM547_01530 PF00196 Bacterial regulatory proteins, luxR family KM547_01550 PF00664 ABC transporter transmembrane region KM547_01550 PF00005 ABC transporter KM547_01550 PF03412 Peptidase C39 family KM547_01555 PF13683 Integrase core domain KM547_01555 PF13276 HTH-like domain KM547_01560 PF00664 ABC transporter transmembrane region KM547_01560 PF00005 ABC transporter KM547_01560 PF03412 Peptidase C39 family KM547_01580 PF00072 Response regulator receiver domain KM547_01580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM547_01580 PF00512 His Kinase A (phospho-acceptor) domain KM547_01580 PF01627 Hpt domain KM547_01580 PF00672 HAMP domain KM547_01580 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KM547_01600 PF01527 Transposase KM547_01605 PF13276 HTH-like domain KM547_01605 PF13333 Integrase core domain KM547_01605 PF00665 Integrase core domain KM547_01620 PF00920 Dehydratase family KM547_01625 PF06693 Protein of unknown function (DUF1190) KM547_01630 PF03738 Glutathionylspermidine synthase preATP-grasp KM547_01640 PF17863 AAA lid domain KM547_01640 PF07726 ATPase family associated with various cellular activities (AAA) KM547_01675 PF01037 Lrp/AsnC ligand binding domain KM547_01685 PF07690 Major Facilitator Superfamily KM547_01695 PF00132 Bacterial transferase hexapeptide (six repeats) KM547_01710 PF00529 HlyD membrane-fusion protein of T1SS KM547_01710 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KM547_01715 PF00873 AcrB/AcrD/AcrF family KM547_01720 PF02321 Outer membrane efflux protein KM547_01730 PF13932 GidA associated domain KM547_01730 PF01134 Glucose inhibited division protein A KM547_01740 PF00291 Pyridoxal-phosphate dependent enzyme KM547_01755 PF13649 Methyltransferase domain KM547_01765 PF12697 Alpha/beta hydrolase family KM547_01770 PF00155 Aminotransferase class I and II KM547_01775 PF04055 Radical SAM superfamily KM547_01775 PF06968 Biotin and Thiamin Synthesis associated domain KM547_01785 PF07549 SecD/SecF GG Motif KM547_01785 PF02355 Protein export membrane protein KM547_01790 PF01040 UbiA prenyltransferase family KM547_01800 PF00665 Integrase core domain KM547_01800 PF13333 Integrase core domain KM547_01800 PF13276 HTH-like domain KM547_01805 PF01527 Transposase KM547_01850 PF01078 Magnesium chelatase, subunit ChlI KM547_01850 PF13335 Magnesium chelatase, subunit ChlI C-terminal KM547_01855 PF04380 Membrane fusogenic activity KM547_01860 PF00543 Nitrogen regulatory protein P-II KM547_01875 PF17284 Spermidine synthase tetramerisation domain KM547_01880 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KM547_01880 PF17810 Arginine decarboxylase helical bundle domain KM547_01880 PF17944 Arginine decarboxylase C-terminal helical extension KM547_01885 PF13193 AMP-binding enzyme C-terminal domain KM547_01885 PF00668 Condensation domain KM547_01885 PF00550 Phosphopantetheine attachment site KM547_01885 PF00975 Thioesterase domain KM547_01885 PF00501 AMP-binding enzyme KM547_01890 PF03033 Glycosyltransferase family 28 N-terminal domain KM547_01890 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase KM547_01895 PF01757 Acyltransferase family KM547_01920 PF00106 short chain dehydrogenase KM547_01930 PF03485 Arginyl tRNA synthetase N terminal domain KM547_01930 PF05746 DALR anticodon binding domain KM547_01930 PF00750 tRNA synthetases class I (R) KM547_01935 PF04002 RadC-like JAB domain KM547_01940 PF02441 Flavoprotein KM547_01940 PF04127 DNA / pantothenate metabolism flavoprotein KM547_01945 PF00692 dUTPase KM547_01950 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KM547_01950 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KM547_01950 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KM547_01950 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KM547_01960 PF00156 Phosphoribosyl transferase domain KM547_01970 PF07690 Major Facilitator Superfamily KM547_01980 PF03702 Anhydro-N-acetylmuramic acid kinase KM547_01985 PF04225 Opacity-associated protein A LysM-like domain KM547_01985 PF01551 Peptidase family M23 KM547_01990 PF00579 tRNA synthetases class I (W and Y) KM547_02030 PF13276 HTH-like domain KM547_02030 PF00665 Integrase core domain KM547_02030 PF13333 Integrase core domain KM547_02035 PF01527 Transposase KM547_02040 PF00107 Zinc-binding dehydrogenase KM547_02040 PF08240 Alcohol dehydrogenase GroES-like domain KM547_02045 PF04389 Peptidase family M28 KM547_02055 PF01551 Peptidase family M23 KM547_02060 PF03572 Peptidase family S41 KM547_02060 PF13180 PDZ domain KM547_02065 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KM547_02065 PF11890 Domain of unknown function (DUF3410) KM547_02065 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KM547_02080 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) KM547_02090 PF01301 Glycosyl hydrolases family 35 KM547_02095 PF13520 Amino acid permease KM547_02100 PF01467 Cytidylyltransferase-like KM547_02100 PF00294 pfkB family carbohydrate kinase KM547_02105 PF02056 Family 4 glycosyl hydrolase KM547_02105 PF11975 Family 4 glycosyl hydrolase C-terminal domain KM547_02110 PF00171 Aldehyde dehydrogenase family KM547_02110 PF01619 Proline dehydrogenase KM547_02110 PF18327 Proline utilization A proline dehydrogenase N-terminal domain KM547_02110 PF14850 DNA-binding domain of Proline dehydrogenase KM547_02120 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KM547_02120 PF02790 Cytochrome C oxidase subunit II, transmembrane domain KM547_02125 PF00115 Cytochrome C and Quinol oxidase polypeptide I KM547_02130 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 KM547_02135 PF00510 Cytochrome c oxidase subunit III KM547_02160 PF01040 UbiA prenyltransferase family KM547_02170 PF13593 SBF-like CPA transporter family (DUF4137) KM547_02175 PF08278 DNA primase DnaG DnaB-binding KM547_02175 PF10410 DnaB-helicase binding domain of primase KM547_02175 PF08275 DNA primase catalytic core, N-terminal domain KM547_02175 PF01807 CHC2 zinc finger KM547_02180 PF03631 Virulence factor BrkB KM547_02190 PF01165 Ribosomal protein S21 KM547_02195 PF00814 Glycoprotease family KM547_02200 PF02152 Dihydroneopterin aldolase KM547_02205 PF14403 Circularly permuted ATP-grasp type 2 KM547_02215 PF00933 Glycosyl hydrolase family 3 N terminal domain KM547_02215 PF01915 Glycosyl hydrolase family 3 C-terminal domain KM547_02215 PF14310 Fibronectin type III-like domain KM547_02220 PF07995 Glucose / Sorbosone dehydrogenase KM547_02245 PF13520 Amino acid permease KM547_02255 PF13378 Enolase C-terminal domain-like KM547_02255 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KM547_02265 PF00593 TonB dependent receptor KM547_02265 PF07715 TonB-dependent Receptor Plug Domain KM547_02270 PF01510 N-acetylmuramoyl-L-alanine amidase KM547_02270 PF01471 Putative peptidoglycan binding domain KM547_02320 PF07063 Domain of unknown function (DUF1338) KM547_02330 PF00873 AcrB/AcrD/AcrF family KM547_02335 PF00873 AcrB/AcrD/AcrF family KM547_02340 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KM547_02345 PF07687 Peptidase dimerisation domain KM547_02345 PF01546 Peptidase family M20/M25/M40 KM547_02350 PF14489 QueF-like protein KM547_02350 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term KM547_02355 PF04972 BON domain KM547_02355 PF01476 LysM domain KM547_02365 PF09827 CRISPR associated protein Cas2 KM547_02390 PF09704 CRISPR-associated protein (Cas_Cas5) KM547_02405 PF03971 Monomeric isocitrate dehydrogenase KM547_02415 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) KM547_02425 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KM547_02425 PF07498 Rho termination factor, N-terminal domain KM547_02425 PF07497 Rho termination factor, RNA-binding domain KM547_02430 PF00085 Thioredoxin KM547_02435 PF00271 Helicase conserved C-terminal domain KM547_02435 PF12300 ATP-dependent RNA helicase RhlB KM547_02435 PF00270 DEAD/DEAH box helicase KM547_02440 PF00005 ABC transporter KM547_02445 PF18075 FtsX extracellular domain KM547_02450 PF01339 CheB methylesterase KM547_02450 PF00072 Response regulator receiver domain KM547_02455 PF03167 Uracil DNA glycosylase superfamily KM547_02460 PF00140 Sigma-70 factor, region 1.2 KM547_02460 PF04542 Sigma-70 region 2 KM547_02460 PF04545 Sigma-70, region 4 KM547_02465 PF03458 UPF0126 domain KM547_02470 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM547_02475 PF00271 Helicase conserved C-terminal domain KM547_02475 PF17764 3′ DNA-binding domain (3′BD) KM547_02475 PF18074 Primosomal protein N C-terminal domain KM547_02475 PF18319 PriA DNA helicase Cys-rich region (CRR) domain KM547_02475 PF00270 DEAD/DEAH box helicase KM547_02490 PF01554 MatE KM547_02495 PF01343 Peptidase family S49 KM547_02520 PF01300 Telomere recombination KM547_02525 PF13368 Topoisomerase C-terminal repeat KM547_02525 PF01131 DNA topoisomerase KM547_02525 PF01751 Toprim domain KM547_02530 PF06271 RDD family KM547_02535 PF07963 Prokaryotic N-terminal methylation motif KM547_02535 PF00114 Pilin (bacterial filament) KM547_02540 PF04361 Protein of unknown function (DUF494) KM547_02545 PF02481 DNA recombination-mediator protein A KM547_02545 PF17782 DprA winged helix domain KM547_02550 PF01476 LysM domain KM547_02555 PF01327 Polypeptide deformylase KM547_02560 PF02911 Formyl transferase, C-terminal domain KM547_02560 PF00551 Formyl transferase KM547_02565 PF01029 NusB family KM547_02565 PF01189 16S rRNA methyltransferase RsmB/F KM547_02570 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase KM547_02585 PF00535 Glycosyl transferase family 2 KM547_02605 PF00925 GTP cyclohydrolase II KM547_02620 PF02580 D-Tyr-tRNA(Tyr) deacylase KM547_02625 PF04545 Sigma-70, region 4 KM547_02625 PF04546 Sigma-70, non-essential region KM547_02625 PF03979 Sigma-70 factor, region 1.1 KM547_02625 PF00140 Sigma-70 factor, region 1.2 KM547_02625 PF04542 Sigma-70 region 2 KM547_02625 PF04539 Sigma-70 region 3 KM547_02635 PF07690 Major Facilitator Superfamily KM547_02640 PF00356 Bacterial regulatory proteins, lacI family KM547_02640 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KM547_02650 PF00128 Alpha amylase, catalytic domain KM547_02650 PF11896 Domain of unknown function (DUF3416) KM547_02655 PF16657 Maltogenic Amylase, C-terminal domain KM547_02655 PF00128 Alpha amylase, catalytic domain KM547_02660 PF02806 Alpha amylase, C-terminal all-beta domain KM547_02660 PF00128 Alpha amylase, catalytic domain KM547_02660 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KM547_02735 PF02899 Phage integrase, N-terminal SAM-like domain KM547_02735 PF00589 Phage integrase family KM547_02750 PF12441 CopG antitoxin of type II toxin-antitoxin system KM547_02765 PF13361 UvrD-like helicase C-terminal domain KM547_02765 PF00580 UvrD/REP helicase N-terminal domain KM547_02765 PF12705 PD-(D/E)XK nuclease superfamily KM547_02780 PF12697 Alpha/beta hydrolase family KM547_02790 PF12706 Beta-lactamase superfamily domain KM547_02795 PF00440 Bacterial regulatory proteins, tetR family KM547_02795 PF08359 YsiA-like protein, C-terminal region KM547_02800 PF01494 FAD binding domain KM547_02830 PF02203 Tar ligand binding domain homologue KM547_02830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM547_02830 PF00672 HAMP domain KM547_02845 PF05067 Manganese containing catalase KM547_02850 PF05974 Domain of unknown function (DUF892) KM547_02855 PF05974 Domain of unknown function (DUF892) KM547_02865 PF03707 Bacterial signalling protein N terminal repeat KM547_02865 PF00563 EAL domain KM547_02865 PF00990 Diguanylate cyclase, GGDEF domain KM547_02870 PF06745 KaiC KM547_02880 PF00440 Bacterial regulatory proteins, tetR family KM547_02885 PF00970 Oxidoreductase FAD-binding domain KM547_02885 PF00111 2Fe-2S iron-sulfur cluster binding domain KM547_02885 PF00175 Oxidoreductase NAD-binding domain KM547_02890 PF00487 Fatty acid desaturase KM547_02900 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM547_02900 PF00205 Thiamine pyrophosphate enzyme, central domain KM547_02900 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM547_02905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM547_02905 PF00512 His Kinase A (phospho-acceptor) domain KM547_02910 PF00072 Response regulator receiver domain KM547_02910 PF00158 Sigma-54 interaction domain KM547_02910 PF02954 Bacterial regulatory protein, Fis family KM547_02925 PF07690 Major Facilitator Superfamily KM547_02930 PF10414 Sirohaem synthase dimerisation region KM547_02930 PF14824 Sirohaem biosynthesis protein central KM547_02930 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KM547_02935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM547_02935 PF00512 His Kinase A (phospho-acceptor) domain KM547_02935 PF01627 Hpt domain KM547_02935 PF00072 Response regulator receiver domain KM547_02940 PF00005 ABC transporter KM547_02955 PF07690 Major Facilitator Superfamily KM547_02960 PF18267 Rubredoxin NAD+ reductase C-terminal domain KM547_02960 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM547_02960 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KM547_02960 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KM547_02960 PF04324 BFD-like [2Fe-2S] binding domain KM547_02965 PF00355 Rieske [2Fe-2S] domain KM547_02970 PF04324 BFD-like [2Fe-2S] binding domain KM547_02970 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KM547_02970 PF00384 Molybdopterin oxidoreductase KM547_02970 PF01568 Molydopterin dinucleotide binding domain KM547_02975 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KM547_02980 PF00128 Alpha amylase, catalytic domain KM547_02980 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KM547_02990 PF00128 Alpha amylase, catalytic domain KM547_02995 PF02446 4-alpha-glucanotransferase KM547_03000 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KM547_03000 PF11941 Domain of unknown function (DUF3459) KM547_03000 PF00128 Alpha amylase, catalytic domain KM547_03005 PF02806 Alpha amylase, C-terminal all-beta domain KM547_03005 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KM547_03005 PF00128 Alpha amylase, catalytic domain KM547_03010 PF08323 Starch synthase catalytic domain KM547_03010 PF00534 Glycosyl transferases group 1 KM547_03020 PF02954 Bacterial regulatory protein, Fis family KM547_03020 PF00072 Response regulator receiver domain KM547_03020 PF00158 Sigma-54 interaction domain KM547_03025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM547_03025 PF13188 PAS domain KM547_03025 PF00072 Response regulator receiver domain KM547_03025 PF08448 PAS fold KM547_03025 PF00512 His Kinase A (phospho-acceptor) domain KM547_03030 PF13632 Glycosyl transferase family group 2 KM547_03040 PF04397 LytTr DNA-binding domain KM547_03040 PF00072 Response regulator receiver domain KM547_03045 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain KM547_03045 PF03900 Porphobilinogen deaminase, C-terminal domain KM547_03060 PF01638 HxlR-like helix-turn-helix KM547_03075 PF00326 Prolyl oligopeptidase family KM547_03075 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain KM547_03080 PF00155 Aminotransferase class I and II KM547_03085 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain KM547_03085 PF00326 Prolyl oligopeptidase family KM547_03090 PF04304 Protein of unknown function (DUF454) KM547_03100 PF01678 Diaminopimelate epimerase KM547_03110 PF00589 Phage integrase family KM547_03110 PF02899 Phage integrase, N-terminal SAM-like domain KM547_03115 PF00227 Proteasome subunit KM547_03120 PF10431 C-terminal, D2-small domain, of ClpB protein KM547_03120 PF07724 AAA domain (Cdc48 subfamily) KM547_03120 PF00004 ATPase family associated with various cellular activities (AAA) KM547_03135 PF00593 TonB dependent receptor KM547_03135 PF07715 TonB-dependent Receptor Plug Domain KM547_03145 PF01209 ubiE/COQ5 methyltransferase family KM547_03175 PF01433 Peptidase family M1 domain KM547_03175 PF11838 ERAP1-like C-terminal domain KM547_03180 PF00364 Biotin-requiring enzyme KM547_03180 PF00561 alpha/beta hydrolase fold KM547_03190 PF00403 Heavy-metal-associated domain KM547_03195 PF13360 PQQ-like domain KM547_03200 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM547_03205 PF00034 Cytochrome c KM547_03205 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP KM547_03205 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KM547_03215 PF08240 Alcohol dehydrogenase GroES-like domain KM547_03215 PF00107 Zinc-binding dehydrogenase KM547_03225 PF01590 GAF domain KM547_03225 PF02954 Bacterial regulatory protein, Fis family KM547_03225 PF00158 Sigma-54 interaction domain KM547_03230 PF00294 pfkB family carbohydrate kinase KM547_03240 PF04085 rod shape-determining protein MreC KM547_03250 PF03717 Penicillin-binding Protein dimerisation domain KM547_03250 PF00905 Penicillin binding protein transpeptidase domain KM547_03255 PF01098 Cell cycle protein KM547_03260 PF01083 Cutinase KM547_03265 PF00295 Glycosyl hydrolases family 28 KM547_03270 PF13406 Transglycosylase SLT domain KM547_03275 PF05036 Sporulation related domain KM547_03275 PF03330 Lytic transglycolase KM547_03280 PF07943 Penicillin-binding protein 5, C-terminal domain KM547_03280 PF00768 D-alanyl-D-alanine carboxypeptidase KM547_03290 PF04359 Protein of unknown function (DUF493) KM547_03295 PF03099 Biotin/lipoate A/B protein ligase family KM547_03300 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family KM547_03300 PF04055 Radical SAM superfamily KM547_03305 PF11818 C-terminal domain of tail specific protease (DUF3340) KM547_03305 PF00595 PDZ domain KM547_03305 PF03572 Peptidase family S41 KM547_03305 PF17804 Tail specific protease N-terminal domain KM547_03330 PF01467 Cytidylyltransferase-like KM547_03330 PF00293 NUDIX domain KM547_03355 PF08338 Domain of unknown function (DUF1731) KM547_03355 PF01370 NAD dependent epimerase/dehydratase family KM547_03365 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KM547_03365 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain KM547_03370 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KM547_03370 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KM547_03375 PF04972 BON domain KM547_03385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM547_03385 PF00512 His Kinase A (phospho-acceptor) domain KM547_03385 PF00989 PAS fold KM547_03390 PF00072 Response regulator receiver domain KM547_03395 PF00512 His Kinase A (phospho-acceptor) domain KM547_03395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM547_03405 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KM547_03425 PF03330 Lytic transglycolase KM547_03435 PF16355 Domain of unknown function (DUF4982) KM547_03435 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 KM547_03435 PF00703 Glycosyl hydrolases family 2 KM547_03435 PF02836 Glycosyl hydrolases family 2, TIM barrel domain KM547_03435 PF02837 Glycosyl hydrolases family 2, sugar binding domain KM547_03450 PF07702 UTRA domain KM547_03450 PF00392 Bacterial regulatory proteins, gntR family KM547_03455 PF07690 Major Facilitator Superfamily KM547_03460 PF00356 Bacterial regulatory proteins, lacI family KM547_03465 PF01380 SIS domain KM547_03470 PF01979 Amidohydrolase family KM547_03480 PF05598 Transposase domain (DUF772) KM547_03515 PF03412 Peptidase C39 family KM547_03515 PF00664 ABC transporter transmembrane region KM547_03515 PF00005 ABC transporter KM547_03525 PF00293 NUDIX domain KM547_03535 PF02219 Methylenetetrahydrofolate reductase KM547_03560 PF13649 Methyltransferase domain KM547_03565 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KM547_03565 PF05221 S-adenosyl-L-homocysteine hydrolase KM547_03570 PF00311 Phosphoenolpyruvate carboxylase KM547_03595 PF00328 Histidine phosphatase superfamily (branch 2) KM547_03600 PF00438 S-adenosylmethionine synthetase, N-terminal domain KM547_03600 PF02773 S-adenosylmethionine synthetase, C-terminal domain KM547_03600 PF02772 S-adenosylmethionine synthetase, central domain KM547_03620 PF01207 Dihydrouridine synthase (Dus) KM547_03635 PF00294 pfkB family carbohydrate kinase KM547_03635 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) KM547_03640 PF01773 Na+ dependent nucleoside transporter N-terminus KM547_03640 PF07662 Na+ dependent nucleoside transporter C-terminus KM547_03640 PF07670 Nucleoside recognition KM547_03645 PF00248 Aldo/keto reductase family KM547_03685 PF00005 ABC transporter KM547_03690 PF13472 GDSL-like Lipase/Acylhydrolase family KM547_03695 PF00072 Response regulator receiver domain KM547_03695 PF00486 Transcriptional regulatory protein, C terminal KM547_03700 PF00512 His Kinase A (phospho-acceptor) domain KM547_03700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM547_03700 PF08521 Two-component sensor kinase N-terminal KM547_03710 PF01219 Prokaryotic diacylglycerol kinase KM547_03715 PF03741 Integral membrane protein TerC family KM547_03720 PF04011 LemA family KM547_03735 PF01790 Prolipoprotein diacylglyceryl transferase KM547_03740 PF00303 Thymidylate synthase KM547_03745 PF00186 Dihydrofolate reductase KM547_03750 PF00149 Calcineurin-like phosphoesterase KM547_03755 PF04379 ApaG domain KM547_03760 PF00398 Ribosomal RNA adenine dimethylase KM547_03765 PF04166 Pyridoxal phosphate biosynthetic protein PdxA KM547_03770 PF09312 SurA N-terminal domain KM547_03770 PF00639 PPIC-type PPIASE domain KM547_03775 PF04453 LPS transport system D KM547_03775 PF03968 OstA-like protein KM547_03780 PF00850 Histone deacetylase domain KM547_03785 PF01923 Cobalamin adenosyltransferase KM547_03795 PF01494 FAD binding domain KM547_03800 PF01494 FAD binding domain KM547_03815 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KM547_03815 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KM547_03820 PF18125 RlmM ferredoxin-like domain KM547_03820 PF01728 FtsJ-like methyltransferase KM547_03840 PF00892 EamA-like transporter family KM547_03845 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain KM547_03845 PF00749 tRNA synthetases class I (E and Q), catalytic domain KM547_03860 PF00072 Response regulator receiver domain KM547_03860 PF00990 Diguanylate cyclase, GGDEF domain KM547_03865 PF00512 His Kinase A (phospho-acceptor) domain KM547_03865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM547_03865 PF00672 HAMP domain KM547_03865 PF17149 Periplasmic sensor domain found in signal transduction proteins KM547_03865 PF01627 Hpt domain KM547_03865 PF00072 Response regulator receiver domain KM547_03870 PF00196 Bacterial regulatory proteins, luxR family KM547_03870 PF00072 Response regulator receiver domain KM547_03880 PF01625 Peptide methionine sulfoxide reductase KM547_03885 PF00923 Transaldolase/Fructose-6-phosphate aldolase KM547_03890 PF14760 Rnk N-terminus KM547_03890 PF01272 Transcription elongation factor, GreA/GreB, C-term KM547_03900 PF03466 LysR substrate binding domain KM547_03900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM547_03905 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM547_03905 PF13192 Thioredoxin domain KM547_03910 PF10417 C-terminal domain of 1-Cys peroxiredoxin KM547_03910 PF00578 AhpC/TSA family KM547_03915 PF05175 Methyltransferase small domain KM547_03915 PF17827 PrmC N-terminal domain KM547_03930 PF00561 alpha/beta hydrolase fold KM547_03945 PF00293 NUDIX domain KM547_03950 PF01367 5'-3' exonuclease, C-terminal SAM fold KM547_03950 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KM547_03950 PF01612 3'-5' exonuclease KM547_03950 PF00476 DNA polymerase family A KM547_03975 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KM547_03975 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KM547_03995 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch KM547_04000 PF02233 NAD(P) transhydrogenase beta subunit KM547_04015 PF01063 Amino-transferase class IV KM547_04020 PF04151 Bacterial pre-peptidase C-terminal domain KM547_04020 PF00082 Subtilase family KM547_04030 PF00082 Subtilase family KM547_04030 PF04151 Bacterial pre-peptidase C-terminal domain KM547_04035 PF04073 Aminoacyl-tRNA editing domain KM547_04050 PF03358 NADPH-dependent FMN reductase KM547_04055 PF03631 Virulence factor BrkB KM547_04060 PF08534 Redoxin KM547_04065 PF00708 Acylphosphatase KM547_04070 PF03976 Polyphosphate kinase 2 (PPK2) KM547_04080 PF00994 Probable molybdopterin binding domain KM547_04085 PF01341 Glycosyl hydrolases family 6 KM547_04085 PF00553 Cellulose binding domain KM547_04085 PF00041 Fibronectin type III domain KM547_04105 PF03462 PCRF domain KM547_04105 PF00472 RF-1 domain KM547_04110 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain KM547_04110 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain KM547_04110 PF01488 Shikimate / quinate 5-dehydrogenase KM547_04120 PF03550 Outer membrane lipoprotein LolB KM547_04125 PF08544 GHMP kinases C terminal KM547_04125 PF00288 GHMP kinases N terminal domain KM547_04135 PF14572 Phosphoribosyl synthetase-associated domain KM547_04135 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KM547_04140 PF01386 Ribosomal L25p family KM547_04140 PF14693 Ribosomal protein TL5, C-terminal domain KM547_04145 PF01195 Peptidyl-tRNA hydrolase KM547_04150 PF01926 50S ribosome-binding GTPase KM547_04150 PF06071 Protein of unknown function (DUF933) KM547_04170 PF03144 Elongation factor Tu domain 2 KM547_04170 PF03143 Elongation factor Tu C-terminal domain KM547_04170 PF00009 Elongation factor Tu GTP binding domain KM547_04180 PF00584 SecE/Sec61-gamma subunits of protein translocation complex KM547_04185 PF00467 KOW motif KM547_04185 PF02357 Transcription termination factor nusG KM547_04190 PF00298 Ribosomal protein L11, RNA binding domain KM547_04190 PF03946 Ribosomal protein L11, N-terminal domain KM547_04195 PF00687 Ribosomal protein L1p/L10e family KM547_04200 PF00466 Ribosomal protein L10 KM547_04205 PF00542 Ribosomal protein L7/L12 C-terminal domain KM547_04205 PF16320 Ribosomal protein L7/L12 dimerisation domain KM547_04210 PF04561 RNA polymerase Rpb2, domain 2 KM547_04210 PF04565 RNA polymerase Rpb2, domain 3 KM547_04210 PF10385 RNA polymerase beta subunit external 1 domain KM547_04210 PF00562 RNA polymerase Rpb2, domain 6 KM547_04210 PF04560 RNA polymerase Rpb2, domain 7 KM547_04210 PF04563 RNA polymerase beta subunit KM547_04215 PF04997 RNA polymerase Rpb1, domain 1 KM547_04215 PF00623 RNA polymerase Rpb1, domain 2 KM547_04215 PF04983 RNA polymerase Rpb1, domain 3 KM547_04215 PF04998 RNA polymerase Rpb1, domain 5 KM547_04215 PF05000 RNA polymerase Rpb1, domain 4 KM547_04220 PF00164 Ribosomal protein S12/S23 KM547_04225 PF00177 Ribosomal protein S7p/S5e KM547_04230 PF00679 Elongation factor G C-terminus KM547_04230 PF14492 Elongation Factor G, domain II KM547_04230 PF03764 Elongation factor G, domain IV KM547_04230 PF00009 Elongation factor Tu GTP binding domain KM547_04230 PF03144 Elongation factor Tu domain 2 KM547_04235 PF03143 Elongation factor Tu C-terminal domain KM547_04235 PF00009 Elongation factor Tu GTP binding domain KM547_04235 PF03144 Elongation factor Tu domain 2 KM547_04240 PF00338 Ribosomal protein S10p/S20e KM547_04245 PF00297 Ribosomal protein L3 KM547_04250 PF00573 Ribosomal protein L4/L1 family KM547_04255 PF00276 Ribosomal protein L23 KM547_04260 PF00181 Ribosomal Proteins L2, RNA binding domain KM547_04260 PF03947 Ribosomal Proteins L2, C-terminal domain KM547_04265 PF00203 Ribosomal protein S19 KM547_04270 PF00237 Ribosomal protein L22p/L17e KM547_04275 PF07650 KH domain KM547_04275 PF00189 Ribosomal protein S3, C-terminal domain KM547_04280 PF00252 Ribosomal protein L16p/L10e KM547_04285 PF00831 Ribosomal L29 protein KM547_04290 PF00366 Ribosomal protein S17 KM547_04295 PF00238 Ribosomal protein L14p/L23e KM547_04300 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KM547_04300 PF00467 KOW motif KM547_04305 PF00281 Ribosomal protein L5 KM547_04305 PF00673 ribosomal L5P family C-terminus KM547_04310 PF00253 Ribosomal protein S14p/S29e KM547_04315 PF00410 Ribosomal protein S8 KM547_04320 PF00347 Ribosomal protein L6 KM547_04325 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast KM547_04330 PF00333 Ribosomal protein S5, N-terminal domain KM547_04330 PF03719 Ribosomal protein S5, C-terminal domain KM547_04335 PF00327 Ribosomal protein L30p/L7e KM547_04340 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KM547_04345 PF00344 SecY translocase KM547_04350 PF00416 Ribosomal protein S13/S18 KM547_04355 PF00411 Ribosomal protein S11 KM547_04360 PF00163 Ribosomal protein S4/S9 N-terminal domain KM547_04360 PF01479 S4 domain KM547_04365 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KM547_04365 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KM547_04365 PF01000 RNA polymerase Rpb3/RpoA insert domain KM547_04370 PF01196 Ribosomal protein L17 KM547_04375 PF02600 Disulfide bond formation protein DsbB KM547_04385 PF01474 Class-II DAHP synthetase family KM547_04405 PF00009 Elongation factor Tu GTP binding domain KM547_04405 PF00679 Elongation factor G C-terminus KM547_04405 PF03144 Elongation factor Tu domain 2 KM547_04410 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KM547_04420 PF00056 lactate/malate dehydrogenase, NAD binding domain KM547_04420 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KM547_04440 PF00043 Glutathione S-transferase, C-terminal domain KM547_04440 PF02798 Glutathione S-transferase, N-terminal domain KM547_04460 PF03009 Glycerophosphoryl diester phosphodiesterase family KM547_04485 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KM547_04485 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM547_04490 PF08240 Alcohol dehydrogenase GroES-like domain KM547_04490 PF00107 Zinc-binding dehydrogenase KM547_04495 PF00248 Aldo/keto reductase family KM547_04505 PF07690 Major Facilitator Superfamily KM547_04510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM547_04510 PF03466 LysR substrate binding domain KM547_04515 PF00223 Photosystem I psaA/psaB protein KM547_04515 PF00691 OmpA family KM547_04525 PF00849 RNA pseudouridylate synthase KM547_04530 PF00155 Aminotransferase class I and II KM547_04540 PF00528 Binding-protein-dependent transport system inner membrane component KM547_04545 PF00528 Binding-protein-dependent transport system inner membrane component KM547_04550 PF00005 ABC transporter KM547_04550 PF17850 CysA C-terminal regulatory domain KM547_04550 PF12857 TOBE-like domain KM547_04560 PF08240 Alcohol dehydrogenase GroES-like domain KM547_04560 PF00107 Zinc-binding dehydrogenase KM547_04570 PF00300 Histidine phosphatase superfamily (branch 1) KM547_04575 PF08245 Mur ligase middle domain KM547_04575 PF02875 Mur ligase family, glutamate ligase domain KM547_04590 PF00156 Phosphoribosyl transferase domain KM547_04595 PF04305 Protein of unknown function (DUF455) KM547_04605 PF00149 Calcineurin-like phosphoesterase KM547_04610 PF01569 PAP2 superfamily KM547_04615 PF13439 Glycosyltransferase Family 4 KM547_04615 PF00534 Glycosyl transferases group 1 KM547_04625 PF02541 Ppx/GppA phosphatase family KM547_04630 PF02503 Polyphosphate kinase middle domain KM547_04630 PF17941 Polyphosphate kinase C-terminal domain 1 KM547_04630 PF13089 Polyphosphate kinase N-terminal domain KM547_04630 PF13090 Polyphosphate kinase C-terminal domain 2 KM547_04635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM547_04635 PF00512 His Kinase A (phospho-acceptor) domain KM547_04635 PF00989 PAS fold KM547_04635 PF11808 Phosphate regulon sensor protein PhoR KM547_04640 PF00072 Response regulator receiver domain KM547_04640 PF00486 Transcriptional regulatory protein, C terminal KM547_04645 PF01435 Peptidase family M48 KM547_04645 PF13181 Tetratricopeptide repeat KM547_04650 PF00462 Glutaredoxin KM547_04660 PF18324 Hypothetical protein TT1725 KM547_04660 PF00180 Isocitrate/isopropylmalate dehydrogenase KM547_04695 PF05698 Bacterial trigger factor protein (TF) C-terminus KM547_04695 PF05697 Bacterial trigger factor protein (TF) KM547_04700 PF00574 Clp protease KM547_04705 PF07724 AAA domain (Cdc48 subfamily) KM547_04705 PF10431 C-terminal, D2-small domain, of ClpB protein KM547_04705 PF06689 ClpX C4-type zinc finger KM547_04710 PF02190 ATP-dependent protease La (LON) substrate-binding domain KM547_04710 PF00004 ATPase family associated with various cellular activities (AAA) KM547_04710 PF05362 Lon protease (S16) C-terminal proteolytic domain KM547_04715 PF00216 Bacterial DNA-binding protein KM547_04745 PF05257 CHAP domain KM547_04745 PF01476 LysM domain KM547_04750 PF16123 Hydroxyacylglutathione hydrolase C-terminus KM547_04750 PF00753 Metallo-beta-lactamase superfamily KM547_04760 PF00075 RNase H KM547_04765 PF00929 Exonuclease KM547_04790 PF01075 Glycosyltransferase family 9 (heptosyltransferase) KM547_04800 PF12706 Beta-lactamase superfamily domain KM547_04805 PF06463 Molybdenum Cofactor Synthesis C KM547_04805 PF04055 Radical SAM superfamily KM547_04815 PF01967 MoaC family KM547_04820 PF02597 ThiS family KM547_04825 PF02391 MoaE protein KM547_04870 PF05598 Transposase domain (DUF772) KM547_04940 PF12169 DNA polymerase III subunits gamma and tau domain III KM547_04940 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding KM547_04940 PF12170 DNA polymerase III tau subunit V interacting with alpha KM547_04945 PF02575 YbaB/EbfC DNA-binding family KM547_04950 PF13662 Toprim domain KM547_04950 PF02132 RecR protein KM547_04955 PF01230 HIT domain KM547_04965 PF11992 Domain of unknown function (DUF3488) KM547_04965 PF13559 Domain of unknown function (DUF4129) KM547_04965 PF01841 Transglutaminase-like superfamily KM547_04975 PF17863 AAA lid domain KM547_04975 PF07726 ATPase family associated with various cellular activities (AAA) KM547_04995 PF02545 Maf-like protein KM547_05000 PF02620 Large ribosomal RNA subunit accumulation protein YceD KM547_05005 PF01783 Ribosomal L32p protein family KM547_05010 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KM547_05010 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KM547_05015 PF00698 Acyl transferase domain KM547_05025 PF00550 Phosphopantetheine attachment site KM547_05030 PF00109 Beta-ketoacyl synthase, N-terminal domain KM547_05030 PF02801 Beta-ketoacyl synthase, C-terminal domain KM547_05035 PF00425 chorismate binding enzyme KM547_05035 PF04715 Anthranilate synthase component I, N terminal region KM547_05040 PF02618 YceG-like family KM547_05045 PF02223 Thymidylate kinase KM547_05050 PF09115 DNA polymerase III, delta subunit, C terminal KM547_05065 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system KM547_05070 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system KM547_05075 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KM547_05075 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KM547_05100 PF01336 OB-fold nucleic acid binding domain KM547_05100 PF02811 PHP domain KM547_05100 PF07733 Bacterial DNA polymerase III alpha NTPase domain KM547_05100 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KM547_05100 PF14579 Helix-hairpin-helix motif KM547_05115 PF01726 LexA DNA binding domain KM547_05115 PF00717 Peptidase S24-like KM547_05120 PF00285 Citrate synthase, C-terminal domain KM547_05135 PF00285 Citrate synthase, C-terminal domain KM547_05140 PF00330 Aconitase family (aconitate hydratase) KM547_05140 PF00694 Aconitase C-terminal domain KM547_05150 PF04303 PrpF protein KM547_05155 PF07715 TonB-dependent Receptor Plug Domain KM547_05155 PF00593 TonB dependent receptor KM547_05165 PF17962 Bacterial macroglobulin domain 6 KM547_05165 PF11974 Bacterial alpha-2-macroglobulin MG3 domain KM547_05165 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain KM547_05165 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain KM547_05165 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain KM547_05165 PF00207 Alpha-2-macroglobulin family KM547_05165 PF07703 Alpha-2-macroglobulin bait region domain KM547_05165 PF01835 MG2 domain KM547_05190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM547_05190 PF00512 His Kinase A (phospho-acceptor) domain KM547_05190 PF00989 PAS fold KM547_05195 PF06832 Penicillin-Binding Protein C-terminus Family KM547_05195 PF00912 Transglycosylase KM547_05195 PF00905 Penicillin binding protein transpeptidase domain KM547_05205 PF08534 Redoxin KM547_05215 PF00226 DnaJ domain KM547_05215 PF01556 DnaJ C terminal domain KM547_05225 PF00072 Response regulator receiver domain KM547_05230 PF08240 Alcohol dehydrogenase GroES-like domain KM547_05230 PF00107 Zinc-binding dehydrogenase KM547_05235 PF12221 Bacterial membrane protein N terminal KM547_05235 PF01145 SPFH domain / Band 7 family KM547_05240 PF01145 SPFH domain / Band 7 family KM547_05255 PF00709 Adenylosuccinate synthetase KM547_05275 PF01433 Peptidase family M1 domain KM547_05305 PF12161 HsdM N-terminal domain KM547_05305 PF02384 N-6 DNA Methylase KM547_05315 PF17761 DUF1016 N-terminal domain KM547_05315 PF06250 YhcG PDDEXK nuclease domain KM547_05320 PF11867 Domain of unknown function (DUF3387) KM547_05320 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) KM547_05320 PF18766 SWI2/SNF2 ATPase KM547_05360 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM547_05370 PF17755 UvrA DNA-binding domain KM547_05380 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain KM547_05380 PF06165 Glycosyltransferase family 36 KM547_05380 PF10091 Putative glucoamylase KM547_05390 PF13823 Alcohol dehydrogenase GroES-associated KM547_05390 PF00107 Zinc-binding dehydrogenase KM547_05390 PF08240 Alcohol dehydrogenase GroES-like domain KM547_05400 PF02585 GlcNAc-PI de-N-acetylase KM547_05415 PF18011 C-terminal domain found in long catalases KM547_05415 PF00199 Catalase KM547_05415 PF06628 Catalase-related immune-responsive KM547_05420 PF00563 EAL domain KM547_05420 PF01590 GAF domain KM547_05420 PF00990 Diguanylate cyclase, GGDEF domain KM547_05420 PF00360 Phytochrome region KM547_05425 PF02347 Glycine cleavage system P-protein KM547_05445 PF00005 ABC transporter KM547_05445 PF03412 Peptidase C39 family KM547_05445 PF00664 ABC transporter transmembrane region KM547_05450 PF07690 Major Facilitator Superfamily KM547_05470 PF08019 Phosphoethanolamine transferase EptA/EptB KM547_05470 PF00884 Sulfatase KM547_05480 PF00072 Response regulator receiver domain KM547_05480 PF00486 Transcriptional regulatory protein, C terminal KM547_05485 PF13493 Domain of unknown function (DUF4118) KM547_05485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM547_05485 PF00512 His Kinase A (phospho-acceptor) domain KM547_05485 PF02702 Osmosensitive K+ channel His kinase sensor domain KM547_05505 PF03776 Septum formation topological specificity factor MinE KM547_05510 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KM547_05515 PF03775 Septum formation inhibitor MinC, C-terminal domain KM547_05515 PF05209 Septum formation inhibitor MinC, N-terminal domain KM547_05525 PF07730 Histidine kinase KM547_05530 PF00072 Response regulator receiver domain KM547_05530 PF00196 Bacterial regulatory proteins, luxR family KM547_05545 PF00730 HhH-GPD superfamily base excision DNA repair protein KM547_05550 PF00535 Glycosyl transferase family 2 KM547_05555 PF00912 Transglycosylase KM547_05555 PF00905 Penicillin binding protein transpeptidase domain KM547_05555 PF14814 Bifunctional transglycosylase second domain KM547_05565 PF04851 Type III restriction enzyme, res subunit KM547_05565 PF13307 Helicase C-terminal domain KM547_05570 PF00814 Glycoprotease family KM547_05575 PF00593 TonB dependent receptor KM547_05585 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain KM547_05585 PF02951 Prokaryotic glutathione synthetase, N-terminal domain KM547_05590 PF00072 Response regulator receiver domain KM547_05595 PF00072 Response regulator receiver domain KM547_05600 PF01584 CheW-like domain KM547_05605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM547_05605 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term KM547_05610 PF01584 CheW-like domain KM547_05610 PF02895 Signal transducing histidine kinase, homodimeric domain KM547_05610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM547_05610 PF01627 Hpt domain KM547_05610 PF00072 Response regulator receiver domain KM547_05615 PF00072 Response regulator receiver domain KM547_05615 PF01339 CheB methylesterase KM547_05645 PF05598 Transposase domain (DUF772) KM547_05670 PF03932 CutC family KM547_05675 PF01112 Asparaginase KM547_05690 PF13333 Integrase core domain KM547_05690 PF13276 HTH-like domain KM547_05690 PF00665 Integrase core domain KM547_05695 PF01527 Transposase KM547_05725 PF05598 Transposase domain (DUF772) KM547_05730 PF01301 Glycosyl hydrolases family 35 KM547_05735 PF17678 Glycosyl hydrolase family 92 N-terminal domain KM547_05735 PF07971 Glycosyl hydrolase family 92 KM547_05745 PF14310 Fibronectin type III-like domain KM547_05745 PF00933 Glycosyl hydrolase family 3 N terminal domain KM547_05745 PF01915 Glycosyl hydrolase family 3 C-terminal domain KM547_05745 PF07691 PA14 domain KM547_05760 PF07691 PA14 domain KM547_05760 PF00933 Glycosyl hydrolase family 3 N terminal domain KM547_05760 PF14310 Fibronectin type III-like domain KM547_05760 PF01915 Glycosyl hydrolase family 3 C-terminal domain KM547_05770 PF02838 Glycosyl hydrolase family 20, domain 2 KM547_05770 PF07691 PA14 domain KM547_05770 PF00728 Glycosyl hydrolase family 20, catalytic domain KM547_05775 PF00704 Glycosyl hydrolases family 18 KM547_05775 PF01476 LysM domain KM547_05790 PF02685 Glucokinase KM547_05800 PF04452 RNA methyltransferase KM547_05805 PF00202 Aminotransferase class-III KM547_05810 PF00293 NUDIX domain KM547_05815 PF00459 Inositol monophosphatase family KM547_05820 PF03819 MazG nucleotide pyrophosphohydrolase domain KM547_05825 PF02694 Uncharacterised BCR, YnfA/UPF0060 family KM547_05830 PF16200 C-terminal region of band_7 KM547_05830 PF01145 SPFH domain / Band 7 family KM547_05840 PF01571 Aminomethyltransferase folate-binding domain KM547_05840 PF08669 Glycine cleavage T-protein C-terminal barrel domain KM547_05845 PF01597 Glycine cleavage H-protein KM547_05870 PF00892 EamA-like transporter family KM547_05895 PF00067 Cytochrome P450 KM547_05900 PF00067 Cytochrome P450 KM547_05905 PF00067 Cytochrome P450 KM547_05920 PF00067 Cytochrome P450 KM547_05925 PF00348 Polyprenyl synthetase KM547_05940 PF01070 FMN-dependent dehydrogenase KM547_05945 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM547_05945 PF02770 Acyl-CoA dehydrogenase, middle domain KM547_05945 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM547_05945 PF09317 Domain of unknown function (DUF1974) KM547_05955 PF00440 Bacterial regulatory proteins, tetR family KM547_05975 PF05598 Transposase domain (DUF772) KM547_05980 PF00593 TonB dependent receptor KM547_05980 PF07715 TonB-dependent Receptor Plug Domain KM547_05990 PF01430 Hsp33 protein KM547_05995 PF00912 Transglycosylase KM547_06000 PF00535 Glycosyl transferase family 2 KM547_06005 PF00571 CBS domain KM547_06010 PF05170 AsmA family KM547_06015 PF03006 Haemolysin-III related KM547_06020 PF00009 Elongation factor Tu GTP binding domain KM547_06020 PF16658 Class II release factor RF3, C-terminal domain KM547_06025 PF01551 Peptidase family M23 KM547_06025 PF04225 Opacity-associated protein A LysM-like domain KM547_06030 PF00561 alpha/beta hydrolase fold KM547_06035 PF01053 Cys/Met metabolism PLP-dependent enzyme KM547_06040 PF00696 Amino acid kinase family KM547_06040 PF00742 Homoserine dehydrogenase KM547_06040 PF03447 Homoserine dehydrogenase, NAD binding domain KM547_06045 PF00561 alpha/beta hydrolase fold KM547_06045 PF00364 Biotin-requiring enzyme KM547_06050 PF00990 Diguanylate cyclase, GGDEF domain KM547_06055 PF03313 Serine dehydratase alpha chain KM547_06055 PF03315 Serine dehydratase beta chain KM547_06070 PF01292 Prokaryotic cytochrome b561 KM547_06085 PF00072 Response regulator receiver domain KM547_06085 PF17149 Periplasmic sensor domain found in signal transduction proteins KM547_06085 PF01627 Hpt domain KM547_06085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM547_06085 PF00512 His Kinase A (phospho-acceptor) domain KM547_06085 PF00672 HAMP domain KM547_06090 PF07690 Major Facilitator Superfamily KM547_06100 PF01208 Uroporphyrinogen decarboxylase (URO-D) KM547_06110 PF13533 Biotin-lipoyl like KM547_06115 PF00873 AcrB/AcrD/AcrF family KM547_06120 PF02321 Outer membrane efflux protein KM547_06125 PF01761 3-dehydroquinate synthase KM547_06130 PF01202 Shikimate kinase KM547_06135 PF01243 Pyridoxamine 5'-phosphate oxidase KM547_06135 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region KM547_06140 PF00583 Acetyltransferase (GNAT) family KM547_06150 PF07690 Major Facilitator Superfamily KM547_06165 PF03807 NADP oxidoreductase coenzyme F420-dependent KM547_06165 PF14748 Pyrroline-5-carboxylate reductase dimerisation KM547_06175 PF01168 Alanine racemase, N-terminal domain KM547_06180 PF00437 Type II/IV secretion system protein KM547_06185 PF00437 Type II/IV secretion system protein KM547_06190 PF13673 Acetyltransferase (GNAT) domain KM547_06190 PF13302 Acetyltransferase (GNAT) domain KM547_06190 PF00117 Glutamine amidotransferase class-I KM547_06190 PF00958 GMP synthase C terminal domain KM547_06190 PF03352 Methyladenine glycosylase KM547_06200 PF02622 Uncharacterized ACR, COG1678 KM547_06205 PF03652 Holliday junction resolvase KM547_06210 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KM547_06210 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KM547_06220 PF00544 Pectate lyase KM547_06225 PF02203 Tar ligand binding domain homologue KM547_06225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM547_06225 PF00672 HAMP domain KM547_06235 PF00324 Amino acid permease KM547_06240 PF03600 Citrate transporter KM547_06255 PF01769 Divalent cation transporter KM547_06255 PF03448 MgtE intracellular N domain KM547_06255 PF00571 CBS domain KM547_06260 PF05524 PEP-utilising enzyme, N-terminal KM547_06260 PF00391 PEP-utilising enzyme, mobile domain KM547_06260 PF02896 PEP-utilising enzyme, TIM barrel domain KM547_06265 PF00381 PTS HPr component phosphorylation site KM547_06275 PF03668 P-loop ATPase protein family KM547_06280 PF07475 HPr Serine kinase C-terminal domain KM547_06280 PF02603 HPr Serine kinase N terminus KM547_06285 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KM547_06290 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KM547_06295 PF00309 Sigma-54 factor, Activator interacting domain (AID) KM547_06295 PF04963 Sigma-54 factor, core binding domain KM547_06295 PF04552 Sigma-54, DNA binding domain KM547_06300 PF00005 ABC transporter KM547_06320 PF00571 CBS domain KM547_06320 PF01380 SIS domain KM547_06330 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KM547_06355 PF05598 Transposase domain (DUF772) KM547_06380 PF00551 Formyl transferase KM547_06395 PF02769 AIR synthase related protein, C-terminal domain KM547_06395 PF00586 AIR synthase related protein, N-terminal domain KM547_06405 PF01594 AI-2E family transporter KM547_06410 PF00308 Bacterial dnaA protein KM547_06415 PF00483 Nucleotidyl transferase KM547_06420 PF01636 Phosphotransferase enzyme family KM547_06445 PF00072 Response regulator receiver domain KM547_06445 PF00486 Transcriptional regulatory protein, C terminal KM547_06455 PF00667 FAD binding domain KM547_06455 PF00258 Flavodoxin KM547_06455 PF00175 Oxidoreductase NAD-binding domain KM547_06460 PF02424 ApbE family KM547_06480 PF18331 PKHD-type hydroxylase C-terminal domain KM547_06480 PF13640 2OG-Fe(II) oxygenase superfamily KM547_06485 PF07715 TonB-dependent Receptor Plug Domain KM547_06485 PF00593 TonB dependent receptor KM547_06490 PF00355 Rieske [2Fe-2S] domain KM547_06500 PF00266 Aminotransferase class-V KM547_06505 PF01458 Uncharacterized protein family (UPF0051) KM547_06510 PF00005 ABC transporter KM547_06515 PF01458 Uncharacterized protein family (UPF0051) KM547_06530 PF01965 DJ-1/PfpI family KM547_06545 PF01551 Peptidase family M23 KM547_06560 PF02566 OsmC-like protein KM547_06570 PF02567 Phenazine biosynthesis-like protein KM547_06575 PF00696 Amino acid kinase family KM547_06575 PF01842 ACT domain KM547_06590 PF08245 Mur ligase middle domain KM547_06600 PF00348 Polyprenyl synthetase KM547_06605 PF00436 Single-strand binding protein family KM547_06610 PF13657 HipA N-terminal domain KM547_06610 PF07804 HipA-like C-terminal domain KM547_06625 PF00854 POT family KM547_06630 PF03169 OPT oligopeptide transporter protein KM547_06635 PF07676 WD40-like Beta Propeller Repeat KM547_06635 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region KM547_06635 PF00326 Prolyl oligopeptidase family KM547_06655 PF13419 Haloacid dehalogenase-like hydrolase KM547_06665 PF04328 Selenoprotein, putative KM547_06670 PF13722 5TM C-terminal transporter carbon starvation CstA KM547_06670 PF02554 Carbon starvation protein CstA KM547_06695 PF04493 Endonuclease V KM547_06700 PF00300 Histidine phosphatase superfamily (branch 1) KM547_06710 PF07944 Beta-L-arabinofuranosidase, GH127 KM547_06720 PF12833 Helix-turn-helix domain KM547_06720 PF02311 AraC-like ligand binding domain KM547_06730 PF00072 Response regulator receiver domain KM547_06730 PF01339 CheB methylesterase KM547_06735 PF01739 CheR methyltransferase, SAM binding domain KM547_06735 PF03705 CheR methyltransferase, all-alpha domain KM547_06740 PF00563 EAL domain KM547_06740 PF00360 Phytochrome region KM547_06740 PF00990 Diguanylate cyclase, GGDEF domain KM547_06740 PF01590 GAF domain KM547_06745 PF01584 CheW-like domain KM547_06750 PF00672 HAMP domain KM547_06750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM547_06750 PF12729 Four helix bundle sensory module for signal transduction KM547_06755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM547_06755 PF02203 Tar ligand binding domain homologue KM547_06755 PF00672 HAMP domain KM547_06760 PF02203 Tar ligand binding domain homologue KM547_06760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM547_06760 PF00672 HAMP domain KM547_06765 PF01627 Hpt domain KM547_06765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM547_06765 PF09078 CheY binding KM547_06765 PF01584 CheW-like domain KM547_06765 PF02895 Signal transducing histidine kinase, homodimeric domain KM547_06775 PF02559 CarD-like/TRCF domain KM547_06775 PF03461 TRCF domain KM547_06775 PF17757 UvrB interaction domain KM547_06775 PF00270 DEAD/DEAH box helicase KM547_06775 PF00271 Helicase conserved C-terminal domain KM547_06795 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ KM547_06815 PF06123 Inner membrane protein CreD KM547_06835 PF00749 tRNA synthetases class I (E and Q), catalytic domain KM547_06840 PF01475 Ferric uptake regulator family KM547_06845 PF07690 Major Facilitator Superfamily KM547_06870 PF01483 Proprotein convertase P-domain KM547_06870 PF00082 Subtilase family KM547_06880 PF00490 Delta-aminolevulinic acid dehydratase KM547_06890 PF07715 TonB-dependent Receptor Plug Domain KM547_06890 PF00593 TonB dependent receptor KM547_06905 PF08240 Alcohol dehydrogenase GroES-like domain KM547_06905 PF00107 Zinc-binding dehydrogenase KM547_06910 PF00654 Voltage gated chloride channel KM547_06920 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KM547_06920 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KM547_06925 PF02805 Metal binding domain of Ada KM547_06925 PF06029 AlkA N-terminal domain KM547_06925 PF00730 HhH-GPD superfamily base excision DNA repair protein KM547_06925 PF12833 Helix-turn-helix domain KM547_06990 PF01494 FAD binding domain KM547_07010 PF00270 DEAD/DEAH box helicase KM547_07010 PF03880 DbpA RNA binding domain KM547_07010 PF00271 Helicase conserved C-terminal domain KM547_07015 PF00849 RNA pseudouridylate synthase KM547_07015 PF01479 S4 domain KM547_07020 PF00990 Diguanylate cyclase, GGDEF domain KM547_07030 PF03812 2-keto-3-deoxygluconate permease KM547_07040 PF03737 Aldolase/RraA KM547_07045 PF00144 Beta-lactamase KM547_07060 PF01965 DJ-1/PfpI family KM547_07065 PF00005 ABC transporter KM547_07065 PF00664 ABC transporter transmembrane region KM547_07130 PF03653 Uncharacterised protein family (UPF0093) KM547_07140 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit KM547_07145 PF07733 Bacterial DNA polymerase III alpha NTPase domain KM547_07145 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KM547_07145 PF14579 Helix-hairpin-helix motif KM547_07145 PF02811 PHP domain KM547_07145 PF01336 OB-fold nucleic acid binding domain KM547_07150 PF01351 Ribonuclease HII KM547_07155 PF02684 Lipid-A-disaccharide synthetase KM547_07160 PF00132 Bacterial transferase hexapeptide (six repeats) KM547_07160 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 KM547_07165 PF07977 FabA-like domain KM547_07170 PF00132 Bacterial transferase hexapeptide (six repeats) KM547_07170 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD KM547_07175 PF01103 Surface antigen KM547_07175 PF07244 Surface antigen variable number repeat KM547_07180 PF17820 PDZ domain KM547_07180 PF02163 Peptidase family M50 KM547_07185 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KM547_07185 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KM547_07185 PF13288 DXP reductoisomerase C-terminal domain KM547_07195 PF01255 Putative undecaprenyl diphosphate synthase KM547_07200 PF01765 Ribosome recycling factor KM547_07205 PF00696 Amino acid kinase family KM547_07210 PF00990 Diguanylate cyclase, GGDEF domain KM547_07215 PF00889 Elongation factor TS KM547_07220 PF00318 Ribosomal protein S2 KM547_07255 PF00557 Metallopeptidase family M24 KM547_07260 PF01966 HD domain KM547_07260 PF08335 GlnD PII-uridylyltransferase KM547_07260 PF01909 Nucleotidyltransferase domain KM547_07265 PF00132 Bacterial transferase hexapeptide (six repeats) KM547_07265 PF14602 Hexapeptide repeat of succinyl-transferase KM547_07265 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal KM547_07270 PF03960 ArsC family KM547_07275 PF01546 Peptidase family M20/M25/M40 KM547_07275 PF07687 Peptidase dimerisation domain KM547_07285 PF00733 Asparagine synthase KM547_07285 PF13537 Glutamine amidotransferase domain KM547_07295 PF01804 Penicillin amidase KM547_07300 PF00210 Ferritin-like domain KM547_07305 PF03989 DNA gyrase C-terminal domain, beta-propeller KM547_07305 PF00521 DNA gyrase/topoisomerase IV, subunit A KM547_07320 PF02321 Outer membrane efflux protein KM547_07325 PF00529 HlyD membrane-fusion protein of T1SS KM547_07325 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KM547_07330 PF07690 Major Facilitator Superfamily KM547_07355 PF06903 VirK protein KM547_07365 PF17876 Cold shock domain KM547_07365 PF08461 Ribonuclease R winged-helix domain KM547_07365 PF08206 Ribonuclease B OB domain KM547_07365 PF00773 RNB domain KM547_07365 PF00575 S1 RNA binding domain KM547_07375 PF00588 SpoU rRNA Methylase family KM547_07375 PF08032 RNA 2'-O ribose methyltransferase substrate binding KM547_07380 PF00072 Response regulator receiver domain KM547_07380 PF00990 Diguanylate cyclase, GGDEF domain KM547_07385 PF05016 ParE toxin of type II toxin-antitoxin system, parDE KM547_07400 PF00929 Exonuclease KM547_07410 PF05114 Protein of unknown function (DUF692) KM547_07420 PF01895 PhoU domain KM547_07425 PF00005 ABC transporter KM547_07430 PF00528 Binding-protein-dependent transport system inner membrane component KM547_07435 PF00528 Binding-protein-dependent transport system inner membrane component KM547_07440 PF12849 PBP superfamily domain KM547_07445 PF12849 PBP superfamily domain KM547_07450 PF07396 Phosphate-selective porin O and P KM547_07460 PF00484 Carbonic anhydrase KM547_07465 PF00916 Sulfate permease family KM547_07465 PF01740 STAS domain KM547_07470 PF10576 Iron-sulfur binding domain of endonuclease III KM547_07470 PF00633 Helix-hairpin-helix motif KM547_07470 PF00730 HhH-GPD superfamily base excision DNA repair protein KM547_07480 PF00378 Enoyl-CoA hydratase/isomerase KM547_07485 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KM547_07485 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KM547_07490 PF00293 NUDIX domain KM547_07495 PF00581 Rhodanese-like domain KM547_07525 PF01170 Putative RNA methylase family UPF0020 KM547_07525 PF02926 THUMP domain KM547_07525 PF10672 S-adenosylmethionine-dependent methyltransferase KM547_07535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM547_07535 PF00672 HAMP domain KM547_07535 PF00512 His Kinase A (phospho-acceptor) domain KM547_07535 PF01627 Hpt domain KM547_07535 PF00072 Response regulator receiver domain KM547_07535 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KM547_07540 PF04286 Protein of unknown function (DUF445) KM547_07555 PF00171 Aldehyde dehydrogenase family KM547_07560 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KM547_07560 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KM547_07565 PF00202 Aminotransferase class-III KM547_07570 PF01381 Helix-turn-helix KM547_07570 PF07883 Cupin domain KM547_07575 PF00171 Aldehyde dehydrogenase family KM547_07585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM547_07585 PF03459 TOBE domain KM547_07590 PF07690 Major Facilitator Superfamily KM547_07595 PF02634 FdhD/NarQ family KM547_07600 PF00384 Molybdopterin oxidoreductase KM547_07610 PF00818 Ice nucleation protein repeat KM547_07610 PF00818 Ice nucleation protein repeat KM547_07615 PF07690 Major Facilitator Superfamily KM547_07615 PF00083 Sugar (and other) transporter KM547_07620 PF00990 Diguanylate cyclase, GGDEF domain KM547_07620 PF08448 PAS fold KM547_07625 PF01266 FAD dependent oxidoreductase KM547_07630 PF00120 Glutamine synthetase, catalytic domain KM547_07635 PF07722 Peptidase C26 KM547_07640 PF00120 Glutamine synthetase, catalytic domain KM547_07650 PF00202 Aminotransferase class-III KM547_07655 PF13416 Bacterial extracellular solute-binding protein KM547_07660 PF13416 Bacterial extracellular solute-binding protein KM547_07665 PF13533 Biotin-lipoyl like KM547_07670 PF07690 Major Facilitator Superfamily KM547_07675 PF02321 Outer membrane efflux protein KM547_07680 PF00005 ABC transporter KM547_07680 PF08402 TOBE domain KM547_07685 PF00528 Binding-protein-dependent transport system inner membrane component KM547_07690 PF00528 Binding-protein-dependent transport system inner membrane component KM547_07695 PF00171 Aldehyde dehydrogenase family KM547_07710 PF00571 CBS domain KM547_07710 PF03471 Transporter associated domain KM547_07720 PF02130 Uncharacterized protein family UPF0054 KM547_07725 PF02562 PhoH-like protein KM547_07730 PF01938 TRAM domain KM547_07730 PF04055 Radical SAM superfamily KM547_07730 PF00919 Uncharacterized protein family UPF0004 KM547_07735 PF02798 Glutathione S-transferase, N-terminal domain KM547_07735 PF00043 Glutathione S-transferase, C-terminal domain KM547_07740 PF01464 Transglycosylase SLT domain KM547_07745 PF00355 Rieske [2Fe-2S] domain KM547_07745 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal KM547_07750 PF00032 Cytochrome b(C-terminal)/b6/petD KM547_07750 PF00033 Cytochrome b/b6/petB KM547_07760 PF02167 Cytochrome C1 family KM547_07765 PF02798 Glutathione S-transferase, N-terminal domain KM547_07765 PF00043 Glutathione S-transferase, C-terminal domain KM547_07770 PF04386 Stringent starvation protein B KM547_07785 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain KM547_07785 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain KM547_07795 PF00731 AIR carboxylase KM547_07800 PF02222 ATP-grasp domain KM547_07800 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain KM547_07805 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KM547_07805 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KM547_07810 PF00462 Glutaredoxin KM547_07815 PF00106 short chain dehydrogenase KM547_07820 PF01914 MarC family integral membrane protein KM547_07825 PF00593 TonB dependent receptor KM547_07830 PF11892 Domain of unknown function (DUF3412) KM547_07830 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases KM547_07830 PF03641 Possible lysine decarboxylase KM547_07835 PF07694 5TMR of 5TMR-LYT KM547_07835 PF06580 Histidine kinase KM547_07840 PF07963 Prokaryotic N-terminal methylation motif KM547_07840 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor KM547_07860 PF05567 Neisseria PilC beta-propeller domain KM547_07865 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor KM547_07865 PF07963 Prokaryotic N-terminal methylation motif KM547_07875 PF07963 Prokaryotic N-terminal methylation motif KM547_07875 PF00114 Pilin (bacterial filament) KM547_07880 PF00271 Helicase conserved C-terminal domain KM547_07880 PF04851 Type III restriction enzyme, res subunit KM547_07880 PF02151 UvrB/uvrC motif KM547_07880 PF12344 Ultra-violet resistance protein B KM547_07880 PF17757 UvrB interaction domain KM547_07895 PF02534 Type IV secretory system Conjugative DNA transfer KM547_07905 PF04335 VirB8 protein KM547_07915 PF03743 Bacterial conjugation TrbI-like protein KM547_07920 PF00437 Type II/IV secretion system protein KM547_07925 PF01464 Transglycosylase SLT domain KM547_07930 PF04956 TrbC/VIRB2 family KM547_07935 PF05101 Type IV secretory pathway, VirB3-like protein KM547_07940 PF03135 CagE, TrbE, VirB family, component of type IV transporter system KM547_07975 PF03129 Anticodon binding domain KM547_07975 PF02824 TGS domain KM547_07975 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM547_07975 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM547_07980 PF00707 Translation initiation factor IF-3, C-terminal domain KM547_07980 PF05198 Translation initiation factor IF-3, N-terminal domain KM547_07985 PF01632 Ribosomal protein L35 KM547_07990 PF00453 Ribosomal protein L20 KM547_07995 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KM547_07995 PF01409 tRNA synthetases class II core domain (F) KM547_08000 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KM547_08000 PF01588 Putative tRNA binding domain KM547_08000 PF03483 B3/4 domain KM547_08000 PF03484 tRNA synthetase B5 domain KM547_08000 PF03147 Ferredoxin-fold anticodon binding domain KM547_08005 PF00216 Bacterial DNA-binding protein KM547_08010 PF13411 MerR HTH family regulatory protein KM547_08030 PF02397 Bacterial sugar transferase KM547_08045 PF13439 Glycosyltransferase Family 4 KM547_08045 PF00534 Glycosyl transferases group 1 KM547_08055 PF14667 Polysaccharide biosynthesis C-terminal domain KM547_08070 PF03808 Glycosyl transferase WecB/TagA/CpsF family KM547_08080 PF13292 1-deoxy-D-xylulose-5-phosphate synthase KM547_08080 PF02779 Transketolase, pyrimidine binding domain KM547_08080 PF02780 Transketolase, C-terminal domain KM547_08090 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM547_08090 PF12806 Acetyl-CoA dehydrogenase C-terminal like KM547_08090 PF02770 Acyl-CoA dehydrogenase, middle domain KM547_08090 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM547_08125 PF02601 Exonuclease VII, large subunit KM547_08125 PF13742 OB-fold nucleic acid binding domain KM547_08130 PF08331 Domain of unknown function (DUF1730) KM547_08135 PF01256 Carbohydrate kinase KM547_08135 PF03853 YjeF-related protein N-terminus KM547_08140 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE KM547_08145 PF01520 N-acetylmuramoyl-L-alanine amidase KM547_08145 PF11741 AMIN domain KM547_08150 PF01119 DNA mismatch repair protein, C-terminal domain KM547_08150 PF08676 MutL C terminal dimerisation domain KM547_08170 PF05233 PHB accumulation regulatory domain KM547_08170 PF07879 PHB/PHA accumulation regulator DNA-binding domain KM547_08175 PF00106 short chain dehydrogenase KM547_08180 PF00749 tRNA synthetases class I (E and Q), catalytic domain KM547_08185 PF01435 Peptidase family M48 KM547_08190 PF00563 EAL domain KM547_08190 PF00072 Response regulator receiver domain KM547_08190 PF00990 Diguanylate cyclase, GGDEF domain KM547_08205 PF05598 Transposase domain (DUF772) KM547_08215 PF07152 YaeQ protein KM547_08220 PF00849 RNA pseudouridylate synthase KM547_08225 PF00313 'Cold-shock' DNA-binding domain KM547_08230 PF00043 Glutathione S-transferase, C-terminal domain KM547_08230 PF02798 Glutathione S-transferase, N-terminal domain KM547_08235 PF07859 alpha/beta hydrolase fold KM547_08240 PF02696 Uncharacterized ACR, YdiU/UPF0061 family KM547_08250 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KM547_08250 PF00529 HlyD membrane-fusion protein of T1SS KM547_08255 PF00873 AcrB/AcrD/AcrF family KM547_08260 PF00156 Phosphoribosyl transferase domain KM547_08265 PF03880 DbpA RNA binding domain KM547_08265 PF00270 DEAD/DEAH box helicase KM547_08265 PF00271 Helicase conserved C-terminal domain KM547_08270 PF00005 ABC transporter KM547_08270 PF16326 ABC transporter C-terminal domain KM547_08270 PF12848 ABC transporter KM547_08280 PF00545 ribonuclease KM547_08285 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KM547_08285 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KM547_08295 PF01915 Glycosyl hydrolase family 3 C-terminal domain KM547_08295 PF00933 Glycosyl hydrolase family 3 N terminal domain KM547_08295 PF14310 Fibronectin type III-like domain KM547_08305 PF00854 POT family KM547_08330 PF01047 MarR family KM547_08335 PF01432 Peptidase family M3 KM547_08345 PF00255 Glutathione peroxidase KM547_08350 PF00175 Oxidoreductase NAD-binding domain KM547_08350 PF00970 Oxidoreductase FAD-binding domain KM547_08360 PF00005 ABC transporter KM547_08380 PF05683 Fumarase C-terminus KM547_08380 PF05681 Fumarate hydratase (Fumerase) KM547_08390 PF02253 Phospholipase A1 KM547_08400 PF00313 'Cold-shock' DNA-binding domain KM547_08415 PF00899 ThiF family KM547_08420 PF01026 TatD related DNase KM547_08435 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM547_08435 PF02770 Acyl-CoA dehydrogenase, middle domain KM547_08435 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM547_08440 PF03358 NADPH-dependent FMN reductase KM547_08445 PF00772 DnaB-like helicase N terminal domain KM547_08445 PF03796 DnaB-like helicase C terminal domain KM547_08450 PF00875 DNA photolyase KM547_08450 PF03441 FAD binding domain of DNA photolyase KM547_08455 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain KM547_08455 PF06974 Protein of unknown function (DUF1298) KM547_08460 PF00691 OmpA family KM547_08460 PF05736 OprF membrane domain KM547_08465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM547_08465 PF03466 LysR substrate binding domain KM547_08480 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KM547_08480 PF00529 HlyD membrane-fusion protein of T1SS KM547_08485 PF00873 AcrB/AcrD/AcrF family KM547_08490 PF00106 short chain dehydrogenase KM547_08495 PF02321 Outer membrane efflux protein KM547_08515 PF05598 Transposase domain (DUF772) KM547_08555 PF00082 Subtilase family KM547_08560 PF01668 SmpB protein KM547_08565 PF03364 Polyketide cyclase / dehydrase and lipid transport KM547_08570 PF03658 RnfH family Ubiquitin KM547_08575 PF04355 SmpA / OmlA family KM547_08580 PF01475 Ferric uptake regulator family KM547_08585 PF02463 RecF/RecN/SMC N terminal domain KM547_08590 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding KM547_08590 PF01628 HrcA protein C terminal domain KM547_08595 PF01025 GrpE KM547_08600 PF00012 Hsp70 protein KM547_08605 PF00226 DnaJ domain KM547_08605 PF00684 DnaJ central domain KM547_08605 PF01556 DnaJ C terminal domain KM547_08610 PF08543 Phosphomethylpyrimidine kinase KM547_08615 PF02153 Prephenate dehydrogenase KM547_08615 PF01817 Chorismate mutase type II KM547_08625 PF00005 ABC transporter KM547_08625 PF00664 ABC transporter transmembrane region KM547_08630 PF01205 Uncharacterized protein family UPF0029 KM547_08640 PF08281 Sigma-70, region 4 KM547_08640 PF04542 Sigma-70 region 2 KM547_08645 PF00563 EAL domain KM547_08645 PF00990 Diguanylate cyclase, GGDEF domain KM547_08645 PF03707 Bacterial signalling protein N terminal repeat KM547_08650 PF03641 Possible lysine decarboxylase KM547_08660 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM547_08660 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM547_08665 PF00364 Biotin-requiring enzyme KM547_08665 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KM547_08665 PF02817 e3 binding domain KM547_08670 PF02779 Transketolase, pyrimidine binding domain KM547_08670 PF16870 2-oxoglutarate dehydrogenase C-terminal KM547_08670 PF16078 2-oxoglutarate dehydrogenase N-terminus KM547_08670 PF00676 Dehydrogenase E1 component KM547_08680 PF08007 Cupin superfamily protein KM547_08685 PF00206 Lyase KM547_08685 PF08328 Adenylosuccinate lyase C-terminal KM547_08695 PF00206 Lyase KM547_08695 PF10415 Fumarase C C-terminus KM547_08720 PF00005 ABC transporter KM547_08725 PF00392 Bacterial regulatory proteins, gntR family KM547_08735 PF00255 Glutathione peroxidase KM547_08740 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KM547_08740 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KM547_08745 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KM547_08745 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KM547_08745 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KM547_08750 PF04102 SlyX KM547_08760 PF01757 Acyltransferase family KM547_08770 PF02965 Vitamin B12 dependent methionine synthase, activation domain KM547_08770 PF02310 B12 binding domain KM547_08770 PF02607 B12 binding domain KM547_08770 PF00809 Pterin binding enzyme KM547_08770 PF02574 Homocysteine S-methyltransferase KM547_08775 PF02574 Homocysteine S-methyltransferase KM547_08775 PF00809 Pterin binding enzyme KM547_08780 PF01209 ubiE/COQ5 methyltransferase family KM547_08785 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM547_08785 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM547_08785 PF02770 Acyl-CoA dehydrogenase, middle domain KM547_08790 PF00873 AcrB/AcrD/AcrF family KM547_08795 PF00529 HlyD membrane-fusion protein of T1SS KM547_08795 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KM547_08805 PF05088 Bacterial NAD-glutamate dehydrogenase KM547_08810 PF01513 ATP-NAD kinase KM547_08835 PF08411 Exonuclease C-terminal KM547_08835 PF00929 Exonuclease KM547_08840 PF01494 FAD binding domain KM547_08845 PF00266 Aminotransferase class-V KM547_08855 PF06052 3-hydroxyanthranilic acid dioxygenase KM547_08860 PF00484 Carbonic anhydrase KM547_08905 PF00072 Response regulator receiver domain KM547_08905 PF00196 Bacterial regulatory proteins, luxR family KM547_08925 PF01336 OB-fold nucleic acid binding domain KM547_08925 PF00152 tRNA synthetases class II (D, K and N) KM547_08930 PF01521 Iron-sulphur cluster biosynthesis KM547_08935 PF17837 4'-phosphopantetheinyl transferase N-terminal domain KM547_08935 PF01648 4'-phosphopantetheinyl transferase superfamily KM547_08940 PF01250 Ribosomal protein S6 KM547_08945 PF01084 Ribosomal protein S18 KM547_08950 PF03948 Ribosomal protein L9, C-terminal domain KM547_08950 PF01281 Ribosomal protein L9, N-terminal domain KM547_08955 PF02463 RecF/RecN/SMC N terminal domain KM547_08960 PF04354 ZipA, C-terminal FtsZ-binding domain KM547_08970 PF12826 Helix-hairpin-helix motif KM547_08970 PF00533 BRCA1 C Terminus (BRCT) domain KM547_08970 PF01653 NAD-dependent DNA ligase adenylation domain KM547_08970 PF03120 NAD-dependent DNA ligase OB-fold domain KM547_08970 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KM547_08975 PF00152 tRNA synthetases class II (D, K and N) KM547_08985 PF01008 Initiation factor 2 subunit family KM547_08990 PF00521 DNA gyrase/topoisomerase IV, subunit A KM547_08990 PF03989 DNA gyrase C-terminal domain, beta-propeller KM547_09020 PF17392 Urocanase C-terminal domain KM547_09020 PF17391 Urocanase N-terminal domain KM547_09020 PF01175 Urocanase Rossmann-like domain KM547_09030 PF00221 Aromatic amino acid lyase KM547_09035 PF07969 Amidohydrolase family KM547_09050 PF00106 short chain dehydrogenase KM547_09085 PF01794 Ferric reductase like transmembrane component KM547_09090 PF00174 Oxidoreductase molybdopterin binding domain KM547_09095 PF00266 Aminotransferase class-V KM547_09100 PF01842 ACT domain KM547_09100 PF01817 Chorismate mutase type II KM547_09100 PF00800 Prephenate dehydratase KM547_09105 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KM547_09110 PF03544 Gram-negative bacterial TonB protein C-terminal KM547_09115 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM547_09115 PF02403 Seryl-tRNA synthetase N-terminal domain KM547_09120 PF03466 LysR substrate binding domain KM547_09120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM547_09185 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KM547_09185 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KM547_09195 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KM547_09200 PF06490 Flagellar regulatory protein FleQ KM547_09200 PF00158 Sigma-54 interaction domain KM547_09200 PF02954 Bacterial regulatory protein, Fis family KM547_09205 PF01339 CheB methylesterase KM547_09205 PF00072 Response regulator receiver domain KM547_09210 PF00309 Sigma-54 factor, Activator interacting domain (AID) KM547_09210 PF04963 Sigma-54 factor, core binding domain KM547_09210 PF04552 Sigma-54, DNA binding domain KM547_09215 PF00072 Response regulator receiver domain KM547_09215 PF00196 Bacterial regulatory proteins, luxR family KM547_09230 PF02561 Flagellar protein FliS KM547_09235 PF02465 Flagellar hook-associated protein 2 N-terminus KM547_09235 PF07195 Flagellar hook-associated protein 2 C-terminus KM547_09235 PF07196 Flagellin hook IN motif KM547_09240 PF00669 Bacterial flagellin N-terminal helical region KM547_09240 PF00700 Bacterial flagellin C-terminal helical region KM547_09245 PF00669 Bacterial flagellin N-terminal helical region KM547_09250 PF00460 Flagella basal body rod protein KM547_09250 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KM547_09255 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase KM547_09255 PF10135 Rod binding protein KM547_09260 PF02119 Flagellar P-ring protein KM547_09265 PF02107 Flagellar L-ring protein KM547_09270 PF00460 Flagella basal body rod protein KM547_09270 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KM547_09275 PF00460 Flagella basal body rod protein KM547_09275 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KM547_09280 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KM547_09280 PF07559 Flagellar basal body protein FlaE KM547_09280 PF00460 Flagella basal body rod protein KM547_09285 PF03963 Flagellar hook capping protein - N-terminal region KM547_09285 PF13860 FlgD Ig-like domain KM547_09285 PF13861 FlgD Tudor-like domain KM547_09290 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KM547_09290 PF00460 Flagella basal body rod protein KM547_09300 PF00072 Response regulator receiver domain KM547_09300 PF01584 CheW-like domain KM547_09320 PF00512 His Kinase A (phospho-acceptor) domain KM547_09320 PF08448 PAS fold KM547_09320 PF00072 Response regulator receiver domain KM547_09320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM547_09320 PF13188 PAS domain KM547_09325 PF03707 Bacterial signalling protein N terminal repeat KM547_09325 PF00990 Diguanylate cyclase, GGDEF domain KM547_09325 PF00563 EAL domain KM547_09330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM547_09330 PF07730 Histidine kinase KM547_09335 PF03707 Bacterial signalling protein N terminal repeat KM547_09335 PF00990 Diguanylate cyclase, GGDEF domain KM547_09335 PF00563 EAL domain KM547_09345 PF00005 ABC transporter KM547_09355 PF00672 HAMP domain KM547_09355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM547_09355 PF12729 Four helix bundle sensory module for signal transduction KM547_09360 PF04356 Protein of unknown function (DUF489) KM547_09370 PF00293 NUDIX domain KM547_09380 PF02617 ATP-dependent Clp protease adaptor protein ClpS KM547_09385 PF07724 AAA domain (Cdc48 subfamily) KM547_09385 PF00004 ATPase family associated with various cellular activities (AAA) KM547_09385 PF10431 C-terminal, D2-small domain, of ClpB protein KM547_09385 PF02861 Clp amino terminal domain, pathogenicity island component KM547_09385 PF17871 AAA lid domain KM547_09390 PF01176 Translation initiation factor 1A / IF-1 KM547_09395 PF03588 Leucyl/phenylalanyl-tRNA protein transferase KM547_09405 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM547_09410 PF17854 FtsK alpha domain KM547_09410 PF01580 FtsK/SpoIIIE family KM547_09410 PF13491 4TM region of DNA translocase FtsK/SpoIIIE KM547_09410 PF09397 Ftsk gamma domain KM547_09425 PF03377 TAL effector repeat KM547_09430 PF03548 Outer membrane lipoprotein carrier protein LolA KM547_09440 PF00004 ATPase family associated with various cellular activities (AAA) KM547_09440 PF16193 AAA C-terminal domain KM547_09440 PF12002 MgsA AAA+ ATPase C terminal KM547_09445 PF00654 Voltage gated chloride channel KM547_09475 PF03918 Cytochrome C biogenesis protein KM547_09480 PF08534 Redoxin KM547_09485 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal KM547_09485 PF01578 Cytochrome C assembly protein KM547_09490 PF03100 CcmE KM547_09500 PF01578 Cytochrome C assembly protein KM547_09505 PF00082 Subtilase family KM547_09515 PF04542 Sigma-70 region 2 KM547_09515 PF08281 Sigma-70, region 4 KM547_09525 PF00034 Cytochrome c KM547_09535 PF01292 Prokaryotic cytochrome b561 KM547_09540 PF05523 WxcM-like, C-terminal KM547_09560 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KM547_09565 PF01943 Polysaccharide biosynthesis protein KM547_09570 PF00535 Glycosyl transferase family 2 KM547_09605 PF13439 Glycosyltransferase Family 4 KM547_09605 PF00534 Glycosyl transferases group 1 KM547_09610 PF13579 Glycosyl transferase 4-like domain KM547_09610 PF00534 Glycosyl transferases group 1 KM547_09630 PF00664 ABC transporter transmembrane region KM547_09630 PF00005 ABC transporter KM547_09640 PF00202 Aminotransferase class-III KM547_09655 PF05394 Avirulence protein KM547_09670 PF01381 Helix-turn-helix KM547_09690 PF01526 Tn3 transposase DDE domain KM547_09690 PF13700 Domain of unknown function (DUF4158) KM547_09695 PF02638 Glycosyl hydrolase-like 10 KM547_09705 PF01526 Tn3 transposase DDE domain KM547_09705 PF13700 Domain of unknown function (DUF4158) KM547_09725 PF01381 Helix-turn-helix KM547_09740 PF05394 Avirulence protein KM547_09760 PF00672 HAMP domain KM547_09760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM547_09760 PF00512 His Kinase A (phospho-acceptor) domain KM547_09765 PF00072 Response regulator receiver domain KM547_09765 PF00486 Transcriptional regulatory protein, C terminal KM547_09770 PF02321 Outer membrane efflux protein KM547_09780 PF13533 Biotin-lipoyl like KM547_09785 PF00873 AcrB/AcrD/AcrF family KM547_09820 PF00072 Response regulator receiver domain KM547_09820 PF09308 LuxQ, periplasmic KM547_09820 PF00512 His Kinase A (phospho-acceptor) domain KM547_09820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM547_09825 PF16921 Tex protein YqgF-like domain KM547_09825 PF09371 Tex-like protein N-terminal domain KM547_09825 PF00575 S1 RNA binding domain KM547_09825 PF17674 HHH domain KM547_09830 PF00072 Response regulator receiver domain KM547_09830 PF13426 PAS domain KM547_09830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM547_09840 PF01266 FAD dependent oxidoreductase KM547_09840 PF05430 S-adenosyl-L-methionine-dependent methyltransferase KM547_09860 PF00561 alpha/beta hydrolase fold KM547_09870 PF01066 CDP-alcohol phosphatidyltransferase KM547_09890 PF03618 Kinase/pyrophosphorylase KM547_09895 PF00391 PEP-utilising enzyme, mobile domain KM547_09895 PF02896 PEP-utilising enzyme, TIM barrel domain KM547_09895 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KM547_09900 PF05552 Conserved TM helix KM547_09900 PF00924 Mechanosensitive ion channel KM547_09905 PF00929 Exonuclease KM547_09910 PF14437 MafB19-like deaminase KM547_09915 PF02742 Iron dependent repressor, metal binding and dimerisation domain KM547_09915 PF01325 Iron dependent repressor, N-terminal DNA binding domain KM547_09920 PF01566 Natural resistance-associated macrophage protein KM547_09925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM547_09925 PF13188 PAS domain KM547_09925 PF00072 Response regulator receiver domain KM547_09925 PF00512 His Kinase A (phospho-acceptor) domain KM547_09925 PF08448 PAS fold KM547_09930 PF06745 KaiC KM547_09935 PF01055 Glycosyl hydrolases family 31 KM547_09935 PF17137 Domain of unknown function (DUF5110) KM547_09935 PF16338 Domain of unknown function (DUF4968) KM547_09940 PF00117 Glutamine amidotransferase class-I KM547_09940 PF02540 NAD synthase KM547_09940 PF00958 GMP synthase C terminal domain KM547_09945 PF00478 IMP dehydrogenase / GMP reductase domain KM547_09945 PF00571 CBS domain KM547_09965 PF00999 Sodium/hydrogen exchanger family KM547_09965 PF02254 TrkA-N domain KM547_09970 PF00899 ThiF family KM547_09975 PF00994 Probable molybdopterin binding domain KM547_09975 PF03454 MoeA C-terminal region (domain IV) KM547_09975 PF03453 MoeA N-terminal region (domain I and II) KM547_09980 PF12804 MobA-like NTP transferase domain KM547_09985 PF01926 50S ribosome-binding GTPase KM547_09985 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KM547_09990 PF01011 PQQ enzyme repeat KM547_09990 PF13360 PQQ-like domain KM547_10000 PF13464 Domain of unknown function (DUF4115) KM547_10010 PF04055 Radical SAM superfamily KM547_10015 PF00334 Nucleoside diphosphate kinase KM547_10025 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KM547_10025 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KM547_10025 PF00378 Enoyl-CoA hydratase/isomerase KM547_10030 PF02803 Thiolase, C-terminal domain KM547_10030 PF00108 Thiolase, N-terminal domain KM547_10035 PF00483 Nucleotidyl transferase KM547_10040 PF02719 Polysaccharide biosynthesis protein KM547_10045 PF00953 Glycosyl transferase family 4 KM547_10050 PF18073 Rubredoxin metal binding domain KM547_10060 PF00216 Bacterial DNA-binding protein KM547_10065 PF00575 S1 RNA binding domain KM547_10070 PF02224 Cytidylate kinase KM547_10075 PF00444 Ribosomal protein L36 KM547_10085 PF04371 Porphyromonas-type peptidyl-arginine deiminase KM547_10090 PF00795 Carbon-nitrogen hydrolase KM547_10115 PF00034 Cytochrome c KM547_10120 PF00034 Cytochrome c KM547_10130 PF01106 NifU-like domain KM547_10135 PF01329 Pterin 4 alpha carbinolamine dehydratase KM547_10145 PF02535 ZIP Zinc transporter KM547_10155 PF00849 RNA pseudouridylate synthase KM547_10155 PF01479 S4 domain KM547_10160 PF10150 Ribonuclease E/G family KM547_10160 PF12111 Polyribonucleotide phosphorylase C terminal KM547_10160 PF00575 S1 RNA binding domain KM547_10170 PF00196 Bacterial regulatory proteins, luxR family KM547_10170 PF00072 Response regulator receiver domain KM547_10185 PF00535 Glycosyl transferase family 2 KM547_10185 PF00534 Glycosyl transferases group 1 KM547_10190 PF02049 Flagellar hook-basal body complex protein FliE KM547_10195 PF01514 Secretory protein of YscJ/FliF family KM547_10195 PF08345 Flagellar M-ring protein C-terminal KM547_10200 PF01706 FliG C-terminal domain KM547_10200 PF14841 FliG middle domain KM547_10200 PF14842 FliG N-terminal domain KM547_10210 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KM547_10210 PF18269 T3SS EscN ATPase C-terminal domain KM547_10230 PF02154 Flagellar motor switch protein FliM KM547_10230 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KM547_10235 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KM547_10240 PF04347 Flagellar biosynthesis protein, FliO KM547_10245 PF00813 FliP family KM547_10250 PF01313 Bacterial export proteins, family 3 KM547_10255 PF01311 Bacterial export proteins, family 1 KM547_10260 PF00990 Diguanylate cyclase, GGDEF domain KM547_10270 PF01312 FlhB HrpN YscU SpaS Family KM547_10275 PF00771 FHIPEP family KM547_10280 PF00448 SRP54-type protein, GTPase domain KM547_10285 PF10609 NUBPL iron-transfer P-loop NTPase KM547_10290 PF04539 Sigma-70 region 3 KM547_10290 PF04545 Sigma-70, region 4 KM547_10290 PF04542 Sigma-70 region 2 KM547_10295 PF00072 Response regulator receiver domain KM547_10300 PF04344 Chemotaxis phosphatase, CheZ KM547_10305 PF02895 Signal transducing histidine kinase, homodimeric domain KM547_10305 PF00072 Response regulator receiver domain KM547_10305 PF01584 CheW-like domain KM547_10305 PF01627 Hpt domain KM547_10305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM547_10310 PF01618 MotA/TolQ/ExbB proton channel family KM547_10315 PF00691 OmpA family KM547_10315 PF13677 Membrane MotB of proton-channel complex MotA/MotB KM547_10320 PF13614 AAA domain KM547_10325 PF01584 CheW-like domain KM547_10335 PF00072 Response regulator receiver domain KM547_10340 PF01584 CheW-like domain KM547_10340 PF09078 CheY binding KM547_10340 PF02895 Signal transducing histidine kinase, homodimeric domain KM547_10340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM547_10340 PF01627 Hpt domain KM547_10345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM547_10345 PF02203 Tar ligand binding domain homologue KM547_10345 PF00672 HAMP domain KM547_10350 PF02203 Tar ligand binding domain homologue KM547_10350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM547_10350 PF00672 HAMP domain KM547_10355 PF00672 HAMP domain KM547_10355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM547_10355 PF02203 Tar ligand binding domain homologue KM547_10360 PF00672 HAMP domain KM547_10360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM547_10360 PF02203 Tar ligand binding domain homologue KM547_10370 PF02203 Tar ligand binding domain homologue KM547_10370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM547_10370 PF00672 HAMP domain KM547_10375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM547_10375 PF02203 Tar ligand binding domain homologue KM547_10375 PF00672 HAMP domain KM547_10380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM547_10380 PF02203 Tar ligand binding domain homologue KM547_10380 PF00672 HAMP domain KM547_10390 PF00672 HAMP domain KM547_10390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM547_10390 PF02203 Tar ligand binding domain homologue KM547_10395 PF07317 Flagellar regulator YcgR KM547_10395 PF07238 PilZ domain KM547_10400 PF01584 CheW-like domain KM547_10410 PF02203 Tar ligand binding domain homologue KM547_10410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM547_10410 PF00672 HAMP domain KM547_10420 PF00672 HAMP domain KM547_10420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM547_10420 PF02203 Tar ligand binding domain homologue KM547_10425 PF03705 CheR methyltransferase, all-alpha domain KM547_10425 PF01739 CheR methyltransferase, SAM binding domain KM547_10430 PF03975 CheD chemotactic sensory transduction KM547_10435 PF00072 Response regulator receiver domain KM547_10435 PF01339 CheB methylesterase KM547_10440 PF03707 Bacterial signalling protein N terminal repeat KM547_10440 PF00990 Diguanylate cyclase, GGDEF domain KM547_10440 PF00563 EAL domain KM547_10460 PF00563 EAL domain KM547_10460 PF00990 Diguanylate cyclase, GGDEF domain KM547_10460 PF13426 PAS domain KM547_10465 PF17158 Membrane-associated sensor, integral membrane domain KM547_10465 PF00990 Diguanylate cyclase, GGDEF domain KM547_10475 PF06434 Aconitate hydratase 2 N-terminus KM547_10475 PF11791 Aconitate B N-terminal domain KM547_10475 PF00330 Aconitase family (aconitate hydratase) KM547_10490 PF00694 Aconitase C-terminal domain KM547_10490 PF00330 Aconitase family (aconitate hydratase) KM547_10505 PF00501 AMP-binding enzyme KM547_10505 PF13193 AMP-binding enzyme C-terminal domain KM547_10510 PF00378 Enoyl-CoA hydratase/isomerase KM547_10515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM547_10515 PF00072 Response regulator receiver domain KM547_10515 PF01627 Hpt domain KM547_10515 PF00512 His Kinase A (phospho-acceptor) domain KM547_10520 PF00072 Response regulator receiver domain KM547_10525 PF00152 tRNA synthetases class II (D, K and N) KM547_10525 PF01336 OB-fold nucleic acid binding domain KM547_10545 PF17768 RecJ OB domain KM547_10545 PF02272 DHHA1 domain KM547_10545 PF01368 DHH family KM547_10555 PF03449 Transcription elongation factor, N-terminal KM547_10555 PF01272 Transcription elongation factor, GreA/GreB, C-term KM547_10560 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KM547_10560 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KM547_10560 PF02142 MGS-like domain KM547_10570 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KM547_10570 PF00117 Glutamine amidotransferase class-I KM547_10575 PF01113 Dihydrodipicolinate reductase, N-terminus KM547_10575 PF05173 Dihydrodipicolinate reductase, C-terminus KM547_10580 PF03473 MOSC domain KM547_10580 PF03475 3-alpha domain KM547_10585 PF00155 Aminotransferase class I and II KM547_10595 PF07664 Ferrous iron transport protein B C terminus KM547_10595 PF17910 FeoB cytosolic helical domain KM547_10595 PF07670 Nucleoside recognition KM547_10595 PF02421 Ferrous iron transport protein B KM547_10595 PF04023 FeoA domain KM547_10605 PF00378 Enoyl-CoA hydratase/isomerase KM547_10615 PF00682 HMGL-like KM547_10620 PF00106 short chain dehydrogenase KM547_10625 PF01132 Elongation factor P (EF-P) OB domain KM547_10625 PF09285 Elongation factor P, C-terminal KM547_10625 PF08207 Elongation factor P (EF-P) KOW-like domain KM547_10645 PF02913 FAD linked oxidases, C-terminal domain KM547_10645 PF01565 FAD binding domain KM547_10650 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KM547_10650 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KM547_10665 PF13520 Amino acid permease KM547_10670 PF13520 Amino acid permease KM547_10675 PF00596 Class II Aldolase and Adducin N-terminal domain KM547_10680 PF03079 ARD/ARD' family KM547_10700 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase KM547_10700 PF01502 Phosphoribosyl-AMP cyclohydrolase KM547_10705 PF00977 Histidine biosynthesis protein KM547_10710 PF00977 Histidine biosynthesis protein KM547_10715 PF00117 Glutamine amidotransferase class-I KM547_10720 PF00475 Imidazoleglycerol-phosphate dehydratase KM547_10725 PF00155 Aminotransferase class I and II KM547_10730 PF00815 Histidinol dehydrogenase KM547_10735 PF08029 HisG, C-terminal domain KM547_10735 PF01634 ATP phosphoribosyltransferase KM547_10745 PF03129 Anticodon binding domain KM547_10745 PF13393 Histidyl-tRNA synthetase KM547_10750 PF00027 Cyclic nucleotide-binding domain KM547_10750 PF13545 Crp-like helix-turn-helix domain KM547_10760 PF00291 Pyridoxal-phosphate dependent enzyme KM547_10760 PF14821 Threonine synthase N terminus KM547_10765 PF07519 Tannase and feruloyl esterase KM547_10770 PF13406 Transglycosylase SLT domain KM547_10775 PF08544 GHMP kinases C terminal KM547_10775 PF00288 GHMP kinases N terminal domain KM547_10780 PF00696 Amino acid kinase family KM547_10780 PF01842 ACT domain KM547_10780 PF13840 ACT domain KM547_10780 PF00742 Homoserine dehydrogenase KM547_10780 PF03447 Homoserine dehydrogenase, NAD binding domain KM547_10795 PF00171 Aldehyde dehydrogenase family KM547_10810 PF01180 Dihydroorotate dehydrogenase KM547_10815 PF01565 FAD binding domain KM547_10815 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KM547_10825 PF00580 UvrD/REP helicase N-terminal domain KM547_10825 PF13361 UvrD-like helicase C-terminal domain KM547_10830 PF01569 PAP2 superfamily KM547_10835 PF04551 GcpE protein KM547_10845 PF00072 Response regulator receiver domain KM547_10850 PF00563 EAL domain KM547_10850 PF00990 Diguanylate cyclase, GGDEF domain KM547_10850 PF03707 Bacterial signalling protein N terminal repeat KM547_10855 PF00474 Sodium:solute symporter family KM547_10860 PF14310 Fibronectin type III-like domain KM547_10860 PF00933 Glycosyl hydrolase family 3 N terminal domain KM547_10860 PF01915 Glycosyl hydrolase family 3 C-terminal domain KM547_10865 PF00342 Phosphoglucose isomerase KM547_10870 PF02261 Aspartate decarboxylase KM547_10875 PF02569 Pantoate-beta-alanine ligase KM547_10880 PF02548 Ketopantoate hydroxymethyltransferase KM547_10885 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KM547_10890 PF01743 Poly A polymerase head domain KM547_10890 PF12626 Polymerase A arginine-rich C-terminus KM547_10890 PF12627 Probable RNA and SrmB- binding site of polymerase A KM547_10900 PF00132 Bacterial transferase hexapeptide (six repeats) KM547_10910 PF01520 N-acetylmuramoyl-L-alanine amidase KM547_10910 PF11741 AMIN domain KM547_10915 PF00083 Sugar (and other) transporter KM547_10925 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KM547_10925 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KM547_10935 PF17137 Domain of unknown function (DUF5110) KM547_10935 PF01055 Glycosyl hydrolases family 31 KM547_10935 PF16338 Domain of unknown function (DUF4968) KM547_10955 PF03466 LysR substrate binding domain KM547_10955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM547_10960 PF01081 KDPG and KHG aldolase KM547_10965 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KM547_10965 PF13378 Enolase C-terminal domain-like KM547_10970 PF08450 SMP-30/Gluconolactonase/LRE-like region KM547_10975 PF05035 2-keto-3-deoxy-galactonokinase KM547_10980 PF11953 Domain of unknown function (DUF3470) KM547_10980 PF00037 4Fe-4S binding domain KM547_10990 PF00701 Dihydrodipicolinate synthetase family KM547_11000 PF00578 AhpC/TSA family KM547_11005 PF02562 PhoH-like protein KM547_11005 PF13638 PIN domain KM547_11020 PF08543 Phosphomethylpyrimidine kinase KM547_11020 PF02581 Thiamine monophosphate synthase KM547_11045 PF03466 LysR substrate binding domain KM547_11045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM547_11050 PF02678 Pirin KM547_11050 PF17954 Quercetinase C-terminal cupin domain KM547_11055 PF00128 Alpha amylase, catalytic domain KM547_11055 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KM547_11070 PF02599 Global regulator protein family KM547_11075 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM547_11075 PF02272 DHHA1 domain KM547_11075 PF01411 tRNA synthetases class II (A) KM547_11080 PF02631 RecX family KM547_11085 PF00154 recA bacterial DNA recombination protein KM547_11090 PF01726 LexA DNA binding domain KM547_11090 PF00717 Peptidase S24-like KM547_11095 PF03109 ABC1 family KM547_11100 PF02464 Competence-damaged protein KM547_11105 PF16360 GTP-binding GTPase Middle Region KM547_11105 PF01926 50S ribosome-binding GTPase KM547_11105 PF13167 GTP-binding GTPase N-terminal KM547_11110 PF17209 Hfq protein KM547_11120 PF00809 Pterin binding enzyme KM547_11125 PF17862 AAA+ lid domain KM547_11125 PF01434 Peptidase family M41 KM547_11125 PF06480 FtsH Extracellular KM547_11125 PF00004 ATPase family associated with various cellular activities (AAA) KM547_11130 PF01728 FtsJ-like methyltransferase KM547_11135 PF01985 CRS1 / YhbY (CRM) domain KM547_11145 PF01476 LysM domain KM547_11145 PF01551 Peptidase family M23 KM547_11150 PF09335 SNARE associated Golgi protein KM547_11160 PF01975 Survival protein SurE KM547_11165 PF01713 Smr domain KM547_11170 PF01142 tRNA pseudouridine synthase D (TruD) KM547_11175 PF02542 YgbB family KM547_11180 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KM547_11185 PF04977 Septum formation initiator KM547_11190 PF03952 Enolase, N-terminal domain KM547_11190 PF00113 Enolase, C-terminal TIM barrel domain KM547_11195 PF00793 DAHP synthetase I family KM547_11200 PF06418 CTP synthase N-terminus KM547_11200 PF00117 Glutamine amidotransferase class-I KM547_11210 PF00204 DNA gyrase B KM547_11210 PF00986 DNA gyrase B subunit, carboxyl terminus KM547_11210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM547_11210 PF01751 Toprim domain KM547_11225 PF01595 Cyclin M transmembrane N-terminal domain KM547_11225 PF00571 CBS domain KM547_11225 PF03471 Transporter associated domain KM547_11240 PF00296 Luciferase-like monooxygenase KM547_11250 PF17773 UPF0176 acylphosphatase like domain KM547_11250 PF00581 Rhodanese-like domain KM547_11260 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KM547_11270 PF03707 Bacterial signalling protein N terminal repeat KM547_11270 PF00990 Diguanylate cyclase, GGDEF domain KM547_11270 PF00563 EAL domain KM547_11275 PF13673 Acetyltransferase (GNAT) domain KM547_11280 PF01645 Conserved region in glutamate synthase KM547_11285 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KM547_11285 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KM547_11285 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KM547_11300 PF00356 Bacterial regulatory proteins, lacI family KM547_11305 PF00391 PEP-utilising enzyme, mobile domain KM547_11305 PF05524 PEP-utilising enzyme, N-terminal KM547_11305 PF02896 PEP-utilising enzyme, TIM barrel domain KM547_11305 PF00381 PTS HPr component phosphorylation site KM547_11305 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KM547_11310 PF00294 pfkB family carbohydrate kinase KM547_11315 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KM547_11325 PF00072 Response regulator receiver domain KM547_11325 PF00486 Transcriptional regulatory protein, C terminal KM547_11330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM547_11330 PF00512 His Kinase A (phospho-acceptor) domain KM547_11345 PF12704 MacB-like periplasmic core domain KM547_11345 PF02687 FtsX-like permease family KM547_11345 PF00005 ABC transporter KM547_11400 PF00550 Phosphopantetheine attachment site KM547_11405 PF00109 Beta-ketoacyl synthase, N-terminal domain KM547_11405 PF02801 Beta-ketoacyl synthase, C-terminal domain KM547_11410 PF00202 Aminotransferase class-III KM547_11425 PF06969 HemN C-terminal domain KM547_11425 PF04055 Radical SAM superfamily KM547_11435 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase KM547_11435 PF13746 4Fe-4S dicluster domain KM547_11435 PF12801 4Fe-4S binding domain KM547_11465 PF01066 CDP-alcohol phosphatidyltransferase KM547_11470 PF02151 UvrB/uvrC motif KM547_11470 PF08459 UvrC Helix-hairpin-helix N-terminal KM547_11470 PF01541 GIY-YIG catalytic domain KM547_11480 PF01451 Low molecular weight phosphotyrosine protein phosphatase KM547_11485 PF02348 Cytidylyltransferase KM547_11490 PF02606 Tetraacyldisaccharide-1-P 4'-kinase KM547_11495 PF00005 ABC transporter KM547_11495 PF00664 ABC transporter transmembrane region KM547_11500 PF02472 Biopolymer transport protein ExbD/TolR KM547_11505 PF01618 MotA/TolQ/ExbB proton channel family KM547_11510 PF03772 Competence protein KM547_11510 PF00753 Metallo-beta-lactamase superfamily KM547_11520 PF00005 ABC transporter KM547_11525 PF02687 FtsX-like permease family KM547_11525 PF12704 MacB-like periplasmic core domain KM547_11535 PF03937 Flavinator of succinate dehydrogenase KM547_11540 PF13237 4Fe-4S dicluster domain KM547_11540 PF13085 2Fe-2S iron-sulfur cluster binding domain KM547_11545 PF00890 FAD binding domain KM547_11545 PF02910 Fumarate reductase flavoprotein C-term KM547_11550 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KM547_11555 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KM547_11565 PF01571 Aminomethyltransferase folate-binding domain KM547_11570 PF00005 ABC transporter KM547_11570 PF17912 MalK OB fold domain KM547_11575 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain KM547_11575 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain KM547_11580 PF02685 Glucokinase KM547_11585 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase KM547_11590 PF00920 Dehydratase family KM547_11595 PF01081 KDPG and KHG aldolase KM547_11605 PF00528 Binding-protein-dependent transport system inner membrane component KM547_11610 PF00528 Binding-protein-dependent transport system inner membrane component KM547_11630 PF00356 Bacterial regulatory proteins, lacI family KM547_11640 PF03795 YCII-related domain KM547_11645 PF02616 Segregation and condensation protein ScpA KM547_11655 PF00849 RNA pseudouridylate synthase KM547_11655 PF01479 S4 domain KM547_11670 PF02611 CDP-diacylglycerol pyrophosphatase KM547_11680 PF00795 Carbon-nitrogen hydrolase KM547_11685 PF00155 Aminotransferase class I and II KM547_11690 PF00005 ABC transporter KM547_11695 PF03379 CcmB protein KM547_11700 PF01578 Cytochrome C assembly protein KM547_11710 PF03100 CcmE KM547_11715 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal KM547_11715 PF01578 Cytochrome C assembly protein KM547_11720 PF08534 Redoxin KM547_11725 PF03918 Cytochrome C biogenesis protein KM547_11735 PF00561 alpha/beta hydrolase fold KM547_11740 PF00664 ABC transporter transmembrane region KM547_11740 PF00005 ABC transporter KM547_11745 PF00664 ABC transporter transmembrane region KM547_11745 PF00005 ABC transporter KM547_11750 PF01654 Cytochrome bd terminal oxidase subunit I KM547_11755 PF02322 Cytochrome bd terminal oxidase subunit II KM547_11775 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain KM547_11775 PF02129 X-Pro dipeptidyl-peptidase (S15 family) KM547_11780 PF00171 Aldehyde dehydrogenase family KM547_11785 PF01472 PUA domain KM547_11785 PF00696 Amino acid kinase family KM547_11800 PF00206 Lyase KM547_11805 PF01118 Semialdehyde dehydrogenase, NAD binding domain KM547_11815 PF00696 Amino acid kinase family KM547_11815 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase KM547_11820 PF07687 Peptidase dimerisation domain KM547_11820 PF01546 Peptidase family M20/M25/M40 KM547_11825 PF00764 Arginosuccinate synthase KM547_11830 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KM547_11830 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KM547_11840 PF01406 tRNA synthetases class I (C) catalytic domain KM547_11840 PF09190 DALR domain KM547_11845 PF02657 Fe-S metabolism associated domain KM547_11850 PF07690 Major Facilitator Superfamily KM547_11855 PF00561 alpha/beta hydrolase fold KM547_11890 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KM547_11890 PF01011 PQQ enzyme repeat KM547_11890 PF13360 PQQ-like domain KM547_11905 PF01258 Prokaryotic dksA/traR C4-type zinc finger KM547_11910 PF01809 Putative membrane protein insertion efficiency factor KM547_11915 PF01979 Amidohydrolase family KM547_11920 PF01551 Peptidase family M23 KM547_11920 PF08460 Bacterial SH3 domain KM547_11925 PF01095 Pectinesterase KM547_11930 PF00295 Glycosyl hydrolases family 28 KM547_11945 PF13419 Haloacid dehalogenase-like hydrolase KM547_11955 PF01979 Amidohydrolase family KM547_11960 PF06736 Protein of unknown function (DUF1211) KM547_11965 PF01132 Elongation factor P (EF-P) OB domain KM547_11965 PF08207 Elongation factor P (EF-P) KOW-like domain KM547_11965 PF09285 Elongation factor P, C-terminal KM547_11970 PF04055 Radical SAM superfamily KM547_11975 PF03707 Bacterial signalling protein N terminal repeat KM547_11975 PF00563 EAL domain KM547_11975 PF00990 Diguanylate cyclase, GGDEF domain KM547_11985 PF00588 SpoU rRNA Methylase family KM547_11990 PF00459 Inositol monophosphatase family KM547_11995 PF07549 SecD/SecF GG Motif KM547_11995 PF02355 Protein export membrane protein KM547_12000 PF07549 SecD/SecF GG Motif KM547_12000 PF13721 SecD export protein N-terminal TM region KM547_12000 PF02355 Protein export membrane protein KM547_12005 PF02699 Preprotein translocase subunit KM547_12010 PF01702 Queuine tRNA-ribosyltransferase KM547_12015 PF02547 Queuosine biosynthesis protein KM547_12025 PF00202 Aminotransferase class-III KM547_12035 PF13472 GDSL-like Lipase/Acylhydrolase family KM547_12035 PF07859 alpha/beta hydrolase fold KM547_12045 PF02927 Cellulase N-terminal ig-like domain KM547_12045 PF00759 Glycosyl hydrolase family 9 KM547_12050 PF00753 Metallo-beta-lactamase superfamily KM547_12075 PF18417 L-lysine epsilon oxidase C-terminal domain KM547_12075 PF17990 L-Lysine epsilon oxidase N-terminal KM547_12080 PF01494 FAD binding domain KM547_12105 PF00037 4Fe-4S binding domain KM547_12115 PF01467 Cytidylyltransferase-like KM547_12125 PF00183 Hsp90 protein KM547_12125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM547_12130 PF02615 Malate/L-lactate dehydrogenase KM547_12135 PF07715 TonB-dependent Receptor Plug Domain KM547_12135 PF00593 TonB dependent receptor KM547_12150 PF00593 TonB dependent receptor KM547_12150 PF07715 TonB-dependent Receptor Plug Domain KM547_12155 PF00326 Prolyl oligopeptidase family KM547_12155 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region KM547_12165 PF05598 Transposase domain (DUF772) KM547_12175 PF07532 Bacterial Ig-like domain (group 4) KM547_12180 PF07715 TonB-dependent Receptor Plug Domain KM547_12180 PF00593 TonB dependent receptor KM547_12205 PF13520 Amino acid permease KM547_12220 PF01321 Creatinase/Prolidase N-terminal domain KM547_12220 PF00557 Metallopeptidase family M24 KM547_12225 PF00171 Aldehyde dehydrogenase family KM547_12230 PF00701 Dihydrodipicolinate synthetase family KM547_12235 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM547_12235 PF17806 Sarcosine oxidase A3 domain KM547_12245 PF01266 FAD dependent oxidoreductase KM547_12250 PF05544 Proline racemase KM547_12260 PF00448 SRP54-type protein, GTPase domain KM547_12260 PF02881 SRP54-type protein, helical bundle domain KM547_12265 PF10576 Iron-sulfur binding domain of endonuclease III KM547_12265 PF14815 NUDIX domain KM547_12265 PF00730 HhH-GPD superfamily base excision DNA repair protein KM547_12265 PF00633 Helix-hairpin-helix motif KM547_12270 PF04362 Bacterial Fe(2+) trafficking KM547_12290 PF01612 3'-5' exonuclease KM547_12290 PF00570 HRDC domain KM547_12310 PF01584 CheW-like domain KM547_12315 PF02203 Tar ligand binding domain homologue KM547_12315 PF00672 HAMP domain KM547_12315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM547_12320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM547_12320 PF00672 HAMP domain KM547_12320 PF02743 Cache domain KM547_12325 PF00270 DEAD/DEAH box helicase KM547_12325 PF08494 DEAD/H associated KM547_12325 PF00271 Helicase conserved C-terminal domain KM547_12335 PF00563 EAL domain KM547_12335 PF13188 PAS domain KM547_12335 PF03707 Bacterial signalling protein N terminal repeat KM547_12335 PF00990 Diguanylate cyclase, GGDEF domain KM547_12345 PF00575 S1 RNA binding domain KM547_12345 PF01138 3' exoribonuclease family, domain 1 KM547_12345 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KM547_12345 PF00013 KH domain KM547_12345 PF03725 3' exoribonuclease family, domain 2 KM547_12350 PF00312 Ribosomal protein S15 KM547_12355 PF09157 Pseudouridine synthase II TruB, C-terminal KM547_12355 PF16198 tRNA pseudouridylate synthase B C-terminal domain KM547_12355 PF01509 TruB family pseudouridylate synthase (N terminal domain) KM547_12360 PF02033 Ribosome-binding factor A KM547_12365 PF00009 Elongation factor Tu GTP binding domain KM547_12365 PF11987 Translation-initiation factor 2 KM547_12365 PF08364 Bacterial translation initiation factor IF-2 associated region KM547_12365 PF04760 Translation initiation factor IF-2, N-terminal region KM547_12370 PF13184 NusA-like KH domain KM547_12370 PF00575 S1 RNA binding domain KM547_12370 PF08529 NusA N-terminal domain KM547_12375 PF02576 RimP N-terminal domain KM547_12375 PF17384 RimP C-terminal SH3 domain KM547_12385 PF00361 Proton-conducting membrane transporter KM547_12390 PF00361 Proton-conducting membrane transporter KM547_12390 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus KM547_12395 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KM547_12395 PF00361 Proton-conducting membrane transporter KM547_12400 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KM547_12405 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 KM547_12410 PF12838 4Fe-4S dicluster domain KM547_12415 PF00146 NADH dehydrogenase KM547_12420 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal KM547_12420 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KM547_12420 PF00384 Molybdopterin oxidoreductase KM547_12425 PF10531 SLBB domain KM547_12425 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region KM547_12425 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit KM547_12435 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit KM547_12440 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit KM547_12445 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit KM547_12450 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 KM547_12465 PF00121 Triosephosphate isomerase KM547_12475 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KM547_12475 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KM547_12475 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KM547_12475 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KM547_12480 PF17848 Acetyl-coA carboxylase zinc finger domain KM547_12480 PF01039 Carboxyl transferase domain KM547_12485 PF00290 Tryptophan synthase alpha chain KM547_12495 PF00291 Pyridoxal-phosphate dependent enzyme KM547_12500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM547_12500 PF03466 LysR substrate binding domain KM547_12510 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase KM547_12515 PF01416 tRNA pseudouridine synthase KM547_12525 PF01118 Semialdehyde dehydrogenase, NAD binding domain KM547_12525 PF02774 Semialdehyde dehydrogenase, dimerisation domain KM547_12530 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KM547_12530 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KM547_12535 PF01264 Chorismate synthase KM547_12540 PF05175 Methyltransferase small domain KM547_12545 PF02630 SCO1/SenC KM547_12550 PF02666 Phosphatidylserine decarboxylase KM547_12565 PF06737 Transglycosylase-like domain KM547_12570 PF05872 Bacterial protein of unknown function (DUF853) KM547_12575 PF00293 NUDIX domain KM547_12590 PF03449 Transcription elongation factor, N-terminal KM547_12590 PF01272 Transcription elongation factor, GreA/GreB, C-term KM547_12595 PF01738 Dienelactone hydrolase family KM547_12615 PF00692 dUTPase KM547_12620 PF10609 NUBPL iron-transfer P-loop NTPase KM547_12635 PF07715 TonB-dependent Receptor Plug Domain KM547_12635 PF00593 TonB dependent receptor KM547_12645 PF07715 TonB-dependent Receptor Plug Domain KM547_12645 PF00593 TonB dependent receptor KM547_12650 PF13181 Tetratricopeptide repeat KM547_12660 PF05649 Peptidase family M13 KM547_12660 PF01431 Peptidase family M13 KM547_12670 PF01694 Rhomboid family KM547_12690 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM547_12690 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM547_12695 PF01266 FAD dependent oxidoreductase KM547_12700 PF04235 Protein of unknown function (DUF418) KM547_12705 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KM547_12710 PF00877 NlpC/P60 family KM547_12715 PF00877 NlpC/P60 family KM547_12720 PF03061 Thioesterase superfamily KM547_12730 PF00375 Sodium:dicarboxylate symporter family KM547_12735 PF00245 Alkaline phosphatase KM547_12745 PF11734 TilS substrate C-terminal domain KM547_12745 PF09179 TilS substrate binding domain KM547_12745 PF01171 PP-loop family KM547_12750 PF02609 Exonuclease VII small subunit KM547_12755 PF00348 Polyprenyl synthetase KM547_12765 PF14521 Lysine-specific metallo-endopeptidase KM547_12780 PF01523 Putative modulator of DNA gyrase KM547_12785 PF04751 Protein of unknown function (DUF615) KM547_12790 PF01523 Putative modulator of DNA gyrase KM547_12800 PF10150 Ribonuclease E/G family KM547_12800 PF00575 S1 RNA binding domain KM547_12805 PF02545 Maf-like protein KM547_12810 PF04402 Protein of unknown function (DUF541) KM547_12820 PF07715 TonB-dependent Receptor Plug Domain KM547_12820 PF00593 TonB dependent receptor KM547_12825 PF02590 Predicted SPOUT methyltransferase KM547_12840 PF01467 Cytidylyltransferase-like KM547_12855 PF08264 Anticodon-binding domain of tRNA KM547_12855 PF00133 tRNA synthetases class I (I, L, M and V) KM547_12855 PF13603 Leucyl-tRNA synthetase, Domain 2 KM547_12865 PF00085 Thioredoxin KM547_12880 PF02592 Putative vitamin uptake transporter KM547_12890 PF02574 Homocysteine S-methyltransferase KM547_12900 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM547_12910 PF09334 tRNA synthetases class I (M) KM547_12910 PF01588 Putative tRNA binding domain KM547_12925 PF04060 Putative Fe-S cluster KM547_12940 PF04542 Sigma-70 region 2 KM547_12940 PF04545 Sigma-70, region 4 KM547_12990 PF01042 Endoribonuclease L-PSP KM547_13000 PF03706 Lysylphosphatidylglycerol synthase TM region KM547_13000 PF09924 Uncharacterised conserved protein (DUF2156) KM547_13030 PF07690 Major Facilitator Superfamily KM547_13035 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KM547_13040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM547_13040 PF03466 LysR substrate binding domain KM547_13045 PF00144 Beta-lactamase KM547_13055 PF03831 PhnA domain KM547_13055 PF08274 PhnA Zinc-Ribbon KM547_13060 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KM547_13070 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus KM547_13070 PF05175 Methyltransferase small domain KM547_13085 PF08495 FIST N domain KM547_13085 PF10442 FIST C domain KM547_13085 PF00990 Diguanylate cyclase, GGDEF domain KM547_13085 PF00563 EAL domain KM547_13100 PF01258 Prokaryotic dksA/traR C4-type zinc finger KM547_13110 PF01863 Protein of unknown function DUF45 KM547_13130 PF13472 GDSL-like Lipase/Acylhydrolase family KM547_13135 PF00512 His Kinase A (phospho-acceptor) domain KM547_13135 PF00072 Response regulator receiver domain KM547_13135 PF01627 Hpt domain KM547_13135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM547_13135 PF00672 HAMP domain KM547_13140 PF01011 PQQ enzyme repeat KM547_13140 PF13360 PQQ-like domain KM547_13145 PF07729 FCD domain KM547_13145 PF00392 Bacterial regulatory proteins, gntR family KM547_13150 PF02837 Glycosyl hydrolases family 2, sugar binding domain KM547_13150 PF02836 Glycosyl hydrolases family 2, TIM barrel domain KM547_13150 PF00703 Glycosyl hydrolases family 2 KM547_13150 PF16353 Domain of unknown function(DUF4981) KM547_13150 PF02929 Beta galactosidase small chain KM547_13195 PF01642 Methylmalonyl-CoA mutase KM547_13195 PF02310 B12 binding domain KM547_13210 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KM547_13210 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KM547_13215 PF12951 Passenger-associated-transport-repeat KM547_13215 PF00082 Subtilase family KM547_13215 PF03797 Autotransporter beta-domain KM547_13220 PF02803 Thiolase, C-terminal domain KM547_13220 PF00108 Thiolase, N-terminal domain KM547_13245 PF00990 Diguanylate cyclase, GGDEF domain KM547_13245 PF00072 Response regulator receiver domain KM547_13260 PF04675 DNA ligase N terminus KM547_13260 PF04679 ATP dependent DNA ligase C terminal region KM547_13260 PF01068 ATP dependent DNA ligase domain KM547_13265 PF01068 ATP dependent DNA ligase domain KM547_13265 PF04675 DNA ligase N terminus KM547_13265 PF04679 ATP dependent DNA ligase C terminal region KM547_13270 PF00270 DEAD/DEAH box helicase KM547_13270 PF08494 DEAD/H associated KM547_13270 PF00271 Helicase conserved C-terminal domain KM547_13280 PF01494 FAD binding domain KM547_13285 PF00313 'Cold-shock' DNA-binding domain KM547_13290 PF01048 Phosphorylase superfamily KM547_13295 PF00156 Phosphoribosyl transferase domain KM547_13300 PF00933 Glycosyl hydrolase family 3 N terminal domain KM547_13310 PF01928 CYTH domain KM547_13315 PF05958 tRNA (Uracil-5-)-methyltransferase KM547_13320 PF02954 Bacterial regulatory protein, Fis family KM547_13320 PF00072 Response regulator receiver domain KM547_13320 PF00158 Sigma-54 interaction domain KM547_13325 PF11967 Recombination protein O N terminal KM547_13325 PF02565 Recombination protein O C terminal KM547_13330 PF07650 KH domain KM547_13330 PF01926 50S ribosome-binding GTPase KM547_13335 PF00035 Double-stranded RNA binding motif KM547_13335 PF14622 Ribonuclease-III-like KM547_13345 PF10502 Signal peptidase, peptidase S26 KM547_13350 PF00679 Elongation factor G C-terminus KM547_13350 PF00009 Elongation factor Tu GTP binding domain KM547_13350 PF03144 Elongation factor Tu domain 2 KM547_13350 PF06421 GTP-binding protein LepA C-terminus KM547_13355 PF13180 PDZ domain KM547_13365 PF04542 Sigma-70 region 2 KM547_13365 PF08281 Sigma-70, region 4 KM547_13370 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KM547_13370 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KM547_13370 PF00378 Enoyl-CoA hydratase/isomerase KM547_13380 PF01545 Cation efflux family KM547_13385 PF03601 Conserved hypothetical protein 698 KM547_13390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM547_13400 PF00488 MutS domain V KM547_13400 PF05190 MutS family domain IV KM547_13400 PF01624 MutS domain I KM547_13400 PF05188 MutS domain II KM547_13400 PF05192 MutS domain III KM547_13405 PF13417 Glutathione S-transferase, N-terminal domain KM547_13415 PF00141 Peroxidase KM547_13420 PF01479 S4 domain KM547_13430 PF01554 MatE KM547_13435 PF01245 Ribosomal protein L19 KM547_13440 PF01746 tRNA (Guanine-1)-methyltransferase KM547_13445 PF05239 PRC-barrel domain KM547_13445 PF01782 RimM N-terminal domain KM547_13450 PF00886 Ribosomal protein S16 KM547_13460 PF03060 Nitronate monooxygenase KM547_13465 PF00448 SRP54-type protein, GTPase domain KM547_13465 PF02881 SRP54-type protein, helical bundle domain KM547_13465 PF02978 Signal peptide binding domain KM547_13475 PF01263 Aldose 1-epimerase KM547_13480 PF06964 Alpha-L-arabinofuranosidase C-terminal domain KM547_13485 PF00999 Sodium/hydrogen exchanger family KM547_13495 PF13417 Glutathione S-transferase, N-terminal domain KM547_13495 PF00043 Glutathione S-transferase, C-terminal domain KM547_13500 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation KM547_13500 PF14508 Glycosyl-hydrolase 97 N-terminal KM547_13500 PF10566 Glycoside hydrolase 97 KM547_13510 PF02653 Branched-chain amino acid transport system / permease component KM547_13515 PF02653 Branched-chain amino acid transport system / permease component KM547_13520 PF00005 ABC transporter KM547_13525 PF13407 Periplasmic binding protein domain KM547_13530 PF00171 Aldehyde dehydrogenase family KM547_13540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM547_13540 PF03466 LysR substrate binding domain KM547_13550 PF00920 Dehydratase family KM547_13555 PF01464 Transglycosylase SLT domain KM547_13570 PF00263 Bacterial type II and III secretion system protein KM547_13570 PF03958 Bacterial type II/III secretion system short domain KM547_13575 PF12833 Helix-turn-helix domain KM547_13590 PF02874 ATP synthase alpha/beta family, beta-barrel domain KM547_13590 PF18269 T3SS EscN ATPase C-terminal domain KM547_13590 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KM547_13605 PF01514 Secretory protein of YscJ/FliF family KM547_13620 PF01312 FlhB HrpN YscU SpaS Family KM547_13625 PF00771 FHIPEP family KM547_13640 PF00813 FliP family KM547_13645 PF01313 Bacterial export proteins, family 3 KM547_13675 PF00072 Response regulator receiver domain KM547_13675 PF00486 Transcriptional regulatory protein, C terminal KM547_13725 PF05656 Protein of unknown function (DUF805) KM547_13730 PF18073 Rubredoxin metal binding domain KM547_13735 PF00155 Aminotransferase class I and II KM547_13745 PF03626 Prokaryotic Cytochrome C oxidase subunit IV KM547_13750 PF00510 Cytochrome c oxidase subunit III KM547_13755 PF00115 Cytochrome C and Quinol oxidase polypeptide I KM547_13760 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KM547_13760 PF06481 COX Aromatic Rich Motif KM547_13765 PF13180 PDZ domain KM547_13765 PF02163 Peptidase family M50 KM547_13790 PF02401 LytB protein KM547_13795 PF01252 Signal peptidase (SPase) II KM547_13800 PF08264 Anticodon-binding domain of tRNA KM547_13800 PF00133 tRNA synthetases class I (I, L, M and V) KM547_13800 PF06827 Zinc finger found in FPG and IleRS KM547_13805 PF06574 FAD synthetase KM547_13805 PF01687 Riboflavin kinase KM547_13835 PF13276 HTH-like domain KM547_13835 PF00665 Integrase core domain KM547_13835 PF13333 Integrase core domain KM547_13850 PF03023 Lipid II flippase MurJ KM547_13855 PF01649 Ribosomal protein S20 KM547_13860 PF01018 GTP1/OBG KM547_13860 PF01926 50S ribosome-binding GTPase KM547_13870 PF01016 Ribosomal L27 protein KM547_13875 PF00829 Ribosomal prokaryotic L21 protein KM547_13880 PF00005 ABC transporter KM547_13880 PF17755 UvrA DNA-binding domain KM547_13880 PF17760 UvrA interaction domain KM547_13900 PF00378 Enoyl-CoA hydratase/isomerase KM547_13920 PF04377 Arginine-tRNA-protein transferase, C terminus KM547_13920 PF04376 Arginine-tRNA-protein transferase, N terminus KM547_13930 PF02222 ATP-grasp domain KM547_13930 PF01370 NAD dependent epimerase/dehydratase family KM547_13960 PF13026 Protein of unknown function (DUF3887) KM547_13960 PF12146 Serine aminopeptidase, S33 KM547_13985 PF13291 ACT domain KM547_13985 PF04607 Region found in RelA / SpoT proteins KM547_13985 PF02824 TGS domain KM547_14000 PF12706 Beta-lactamase superfamily domain KM547_14005 PF03070 TENA/THI-4/PQQC family KM547_14010 PF05402 Coenzyme PQQ synthesis protein D (PqqD) KM547_14015 PF13186 Iron-sulfur cluster-binding domain KM547_14015 PF04055 Radical SAM superfamily KM547_14025 PF00654 Voltage gated chloride channel KM547_14035 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold KM547_14035 PF04408 Helicase associated domain (HA2) KM547_14035 PF11898 Domain of unknown function (DUF3418) KM547_14035 PF00270 DEAD/DEAH box helicase KM547_14035 PF00271 Helicase conserved C-terminal domain KM547_14040 PF00210 Ferritin-like domain KM547_14045 PF00270 DEAD/DEAH box helicase KM547_14045 PF00271 Helicase conserved C-terminal domain KM547_14045 PF16124 RecQ zinc-binding KM547_14045 PF09382 RQC domain KM547_14045 PF00570 HRDC domain KM547_14070 PF06508 Queuosine biosynthesis protein QueC KM547_14075 PF04055 Radical SAM superfamily KM547_14085 PF00691 OmpA family KM547_14090 PF07676 WD40-like Beta Propeller Repeat KM547_14090 PF04052 TolB amino-terminal domain KM547_14100 PF02472 Biopolymer transport protein ExbD/TolR KM547_14105 PF01618 MotA/TolQ/ExbB proton channel family KM547_14110 PF03061 Thioesterase superfamily KM547_14115 PF17864 RuvB AAA lid domain KM547_14115 PF05491 RuvB C-terminal winged helix domain KM547_14115 PF05496 Holliday junction DNA helicase RuvB P-loop domain KM547_14120 PF02705 K+ potassium transporter KM547_14125 PF07499 RuvA, C-terminal domain KM547_14125 PF01330 RuvA N terminal domain KM547_14130 PF02075 Crossover junction endodeoxyribonuclease RuvC KM547_14135 PF01709 Transcriptional regulator KM547_14155 PF02938 GAD domain KM547_14155 PF00152 tRNA synthetases class II (D, K and N) KM547_14155 PF01336 OB-fold nucleic acid binding domain KM547_14185 PF05598 Transposase domain (DUF772) KM547_14205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM547_14205 PF03466 LysR substrate binding domain KM547_14220 PF00005 ABC transporter KM547_14220 PF12848 ABC transporter KM547_14225 PF00593 TonB dependent receptor KM547_14225 PF07715 TonB-dependent Receptor Plug Domain KM547_14230 PF07715 TonB-dependent Receptor Plug Domain KM547_14230 PF00593 TonB dependent receptor KM547_14260 PF00593 TonB dependent receptor KM547_14260 PF07715 TonB-dependent Receptor Plug Domain KM547_14275 PF02254 TrkA-N domain KM547_14275 PF00999 Sodium/hydrogen exchanger family KM547_14285 PF07660 Secretin and TonB N terminus short domain KM547_14285 PF07715 TonB-dependent Receptor Plug Domain KM547_14285 PF00593 TonB dependent receptor KM547_14295 PF06276 Ferric iron reductase FhuF-like transporter KM547_14295 PF04183 IucA / IucC family KM547_14300 PF07690 Major Facilitator Superfamily KM547_14305 PF06276 Ferric iron reductase FhuF-like transporter KM547_14305 PF04183 IucA / IucC family KM547_14310 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KM547_14310 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KM547_14320 PF07769 psiF repeat KM547_14325 PF01053 Cys/Met metabolism PLP-dependent enzyme KM547_14340 PF00004 ATPase family associated with various cellular activities (AAA) KM547_14340 PF07724 AAA domain (Cdc48 subfamily) KM547_14340 PF17871 AAA lid domain KM547_14340 PF10431 C-terminal, D2-small domain, of ClpB protein KM547_14340 PF02861 Clp amino terminal domain, pathogenicity island component KM547_14365 PF00583 Acetyltransferase (GNAT) family KM547_14375 PF07715 TonB-dependent Receptor Plug Domain KM547_14375 PF00593 TonB dependent receptor KM547_14385 PF02358 Trehalose-phosphatase KM547_14390 PF00723 Glycosyl hydrolases family 15 KM547_14395 PF00982 Glycosyltransferase family 20 KM547_14400 PF01011 PQQ enzyme repeat KM547_14405 PF00672 HAMP domain KM547_14405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM547_14405 PF02203 Tar ligand binding domain homologue KM547_14410 PF02578 Multi-copper polyphenol oxidoreductase laccase KM547_14415 PF00849 RNA pseudouridylate synthase KM547_14420 PF13525 Outer membrane lipoprotein KM547_14430 PF00005 ABC transporter KM547_14435 PF00528 Binding-protein-dependent transport system inner membrane component KM547_14445 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KM547_14450 PF03781 Sulfatase-modifying factor enzyme 1 KM547_14450 PF12867 DinB superfamily KM547_14460 PF02540 NAD synthase KM547_14460 PF00795 Carbon-nitrogen hydrolase KM547_14465 PF01011 PQQ enzyme repeat KM547_14470 PF02629 CoA binding domain KM547_14470 PF00549 CoA-ligase KM547_14475 PF08442 ATP-grasp domain KM547_14475 PF00549 CoA-ligase KM547_14480 PF00512 His Kinase A (phospho-acceptor) domain KM547_14480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM547_14485 PF00158 Sigma-54 interaction domain KM547_14485 PF02954 Bacterial regulatory protein, Fis family KM547_14485 PF00072 Response regulator receiver domain KM547_14490 PF05973 Phage derived protein Gp49-like (DUF891) KM547_14495 PF01381 Helix-turn-helix KM547_14500 PF00437 Type II/IV secretion system protein KM547_14500 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KM547_14520 PF07963 Prokaryotic N-terminal methylation motif KM547_14520 PF00114 Pilin (bacterial filament) KM547_14525 PF00482 Type II secretion system (T2SS), protein F KM547_14530 PF06750 Bacterial Peptidase A24 N-terminal domain KM547_14530 PF01478 Type IV leader peptidase family KM547_14535 PF01121 Dephospho-CoA kinase KM547_14540 PF00512 His Kinase A (phospho-acceptor) domain KM547_14540 PF00989 PAS fold KM547_14540 PF11808 Phosphate regulon sensor protein PhoR KM547_14540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM547_14545 PF00072 Response regulator receiver domain KM547_14545 PF00486 Transcriptional regulatory protein, C terminal KM547_14555 PF18030 RimK PreATP-grasp domain KM547_14555 PF08443 RimK-like ATP-grasp domain KM547_14560 PF07715 TonB-dependent Receptor Plug Domain KM547_14560 PF07660 Secretin and TonB N terminus short domain KM547_14560 PF00593 TonB dependent receptor KM547_14565 PF05506 Domain of unknown function (DUF756) KM547_14565 PF04185 Phosphoesterase family KM547_14585 PF00266 Aminotransferase class-V KM547_14590 PF01053 Cys/Met metabolism PLP-dependent enzyme KM547_14600 PF07722 Peptidase C26 KM547_14605 PF01810 LysE type translocator KM547_14610 PF04204 Homoserine O-succinyltransferase KM547_14615 PF00120 Glutamine synthetase, catalytic domain KM547_14620 PF05598 Transposase domain (DUF772) KM547_14640 PF05690 Thiazole biosynthesis protein ThiG KM547_14640 PF02597 ThiS family KM547_14645 PF05690 Thiazole biosynthesis protein ThiG KM547_14650 PF02390 Putative methyltransferase KM547_14655 PF03600 Citrate transporter KM547_14655 PF02080 TrkA-C domain KM547_14670 PF01557 Fumarylacetoacetate (FAA) hydrolase family KM547_14675 PF01741 Large-conductance mechanosensitive channel, MscL KM547_14685 PF00356 Bacterial regulatory proteins, lacI family KM547_14690 PF00135 Carboxylesterase family KM547_14695 PF00588 SpoU rRNA Methylase family KM547_14695 PF08032 RNA 2'-O ribose methyltransferase substrate binding KM547_14720 PF01235 Sodium:alanine symporter family KM547_14740 PF00534 Glycosyl transferases group 1 KM547_14740 PF13439 Glycosyltransferase Family 4 KM547_14745 PF00672 HAMP domain KM547_14745 PF02203 Tar ligand binding domain homologue KM547_14745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM547_14750 PF00009 Elongation factor Tu GTP binding domain KM547_14755 PF01507 Phosphoadenosine phosphosulfate reductase family KM547_14760 PF00175 Oxidoreductase NAD-binding domain KM547_14760 PF00258 Flavodoxin KM547_14760 PF00667 FAD binding domain KM547_14765 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KM547_14765 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KM547_14770 PF01507 Phosphoadenosine phosphosulfate reductase family KM547_14800 PF03960 ArsC family KM547_14810 PF01627 Hpt domain KM547_14810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM547_14810 PF00672 HAMP domain KM547_14810 PF00072 Response regulator receiver domain KM547_14810 PF00512 His Kinase A (phospho-acceptor) domain KM547_14825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM547_14825 PF03466 LysR substrate binding domain KM547_14830 PF10414 Sirohaem synthase dimerisation region KM547_14830 PF14824 Sirohaem biosynthesis protein central KM547_14830 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KM547_14835 PF00291 Pyridoxal-phosphate dependent enzyme KM547_14855 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain KM547_14855 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase KM547_14860 PF03450 CO dehydrogenase flavoprotein C-terminal domain KM547_14860 PF00941 FAD binding domain in molybdopterin dehydrogenase KM547_14865 PF00576 HIUase/Transthyretin family KM547_14870 PF13454 FAD-NAD(P)-binding KM547_14890 PF00266 Aminotransferase class-V KM547_14895 PF01546 Peptidase family M20/M25/M40 KM547_14895 PF07687 Peptidase dimerisation domain KM547_14900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM547_14900 PF03466 LysR substrate binding domain KM547_14915 PF01425 Amidase KM547_14920 PF01156 Inosine-uridine preferring nucleoside hydrolase KM547_14935 PF01661 Macro domain KM547_14940 PF00274 Fructose-bisphosphate aldolase class-I KM547_14945 PF00224 Pyruvate kinase, barrel domain KM547_14945 PF02887 Pyruvate kinase, alpha/beta domain KM547_14950 PF13419 Haloacid dehalogenase-like hydrolase KM547_14955 PF00162 Phosphoglycerate kinase KM547_14970 PF00672 HAMP domain KM547_14970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM547_14990 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KM547_14990 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KM547_14995 PF03922 OmpW family KM547_15000 PF03922 OmpW family KM547_15020 PF01022 Bacterial regulatory protein, arsR family KM547_15025 PF00753 Metallo-beta-lactamase superfamily KM547_15035 PF00528 Binding-protein-dependent transport system inner membrane component KM547_15040 PF00005 ABC transporter KM547_15040 PF03459 TOBE domain KM547_15055 PF03544 Gram-negative bacterial TonB protein C-terminal KM547_15060 PF03965 Penicillinase repressor KM547_15080 PF03734 L,D-transpeptidase catalytic domain KM547_15080 PF01476 LysM domain KM547_15085 PF01551 Peptidase family M23 KM547_15085 PF04225 Opacity-associated protein A LysM-like domain KM547_15110 PF02779 Transketolase, pyrimidine binding domain KM547_15110 PF02780 Transketolase, C-terminal domain KM547_15110 PF00456 Transketolase, thiamine diphosphate binding domain KM547_15115 PF00375 Sodium:dicarboxylate symporter family KM547_15130 PF13519 von Willebrand factor type A domain KM547_15140 PF01882 Protein of unknown function DUF58 KM547_15145 PF17863 AAA lid domain KM547_15145 PF07726 ATPase family associated with various cellular activities (AAA) KM547_15150 PF07660 Secretin and TonB N terminus short domain KM547_15150 PF00263 Bacterial type II and III secretion system protein KM547_15150 PF11741 AMIN domain KM547_15150 PF03958 Bacterial type II/III secretion system short domain KM547_15155 PF04351 Pilus assembly protein, PilP KM547_15160 PF04350 Pilus assembly protein, PilO KM547_15170 PF11104 Type IV pilus assembly protein PilM; KM547_15175 PF00905 Penicillin binding protein transpeptidase domain KM547_15175 PF00912 Transglycosylase KM547_15175 PF17092 Penicillin-binding protein OB-like domain KM547_15190 PF00285 Citrate synthase, C-terminal domain KM547_15195 PF01197 Ribosomal protein L31 KM547_15200 PF01156 Inosine-uridine preferring nucleoside hydrolase KM547_15205 PF00270 DEAD/DEAH box helicase KM547_15205 PF00271 Helicase conserved C-terminal domain KM547_15205 PF17191 RecG wedge domain KM547_15210 PF01042 Endoribonuclease L-PSP KM547_15230 PF13291 ACT domain KM547_15230 PF04607 Region found in RelA / SpoT proteins KM547_15230 PF02824 TGS domain KM547_15235 PF01192 RNA polymerase Rpb6 KM547_15240 PF00625 Guanylate kinase KM547_15245 PF08340 Domain of unknown function (DUF1732) KM547_15245 PF03755 YicC-like family, N-terminal region KM547_15250 PF01138 3' exoribonuclease family, domain 1 KM547_15250 PF03725 3' exoribonuclease family, domain 2 KM547_15255 PF01725 Ham1 family KM547_15260 PF06969 HemN C-terminal domain KM547_15260 PF04055 Radical SAM superfamily KM547_15275 PF00557 Metallopeptidase family M24 KM547_15280 PF05195 Aminopeptidase P, N-terminal domain KM547_15280 PF00557 Metallopeptidase family M24 KM547_15285 PF03695 Uncharacterised protein family (UPF0149) KM547_15290 PF03707 Bacterial signalling protein N terminal repeat KM547_15290 PF00990 Diguanylate cyclase, GGDEF domain KM547_15290 PF00563 EAL domain KM547_15300 PF05164 Cell division protein ZapA KM547_15310 PF01812 5-formyltetrahydrofolate cyclo-ligase family KM547_15320 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) KM547_15330 PF13369 Transglutaminase-like superfamily KM547_15335 PF00301 Rubredoxin KM547_15340 PF02581 Thiamine monophosphate synthase KM547_15350 PF00202 Aminotransferase class-III KM547_15360 PF00034 Cytochrome c KM547_15360 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KM547_15370 PF00202 Aminotransferase class-III KM547_15380 PF00480 ROK family KM547_15395 PF01569 PAP2 superfamily KM547_15405 PF01225 Mur ligase family, catalytic domain KM547_15405 PF02875 Mur ligase family, glutamate ligase domain KM547_15405 PF08245 Mur ligase middle domain KM547_15420 PF00365 Phosphofructokinase KM547_15435 PF03030 Inorganic H+ pyrophosphatase KM547_15445 PF00719 Inorganic pyrophosphatase KM547_15465 PF13667 ThiC-associated domain KM547_15465 PF01964 Radical SAM ThiC family KM547_15470 PF00672 HAMP domain KM547_15470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM547_15475 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KM547_15475 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KM547_15480 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM547_15480 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM547_15480 PF00205 Thiamine pyrophosphate enzyme, central domain KM547_15490 PF00291 Pyridoxal-phosphate dependent enzyme KM547_15495 PF00682 HMGL-like KM547_15495 PF08502 LeuA allosteric (dimerisation) domain KM547_15505 PF00330 Aconitase family (aconitate hydratase) KM547_15515 PF00694 Aconitase C-terminal domain KM547_15520 PF00180 Isocitrate/isopropylmalate dehydrogenase KM547_15525 PF00990 Diguanylate cyclase, GGDEF domain KM547_15540 PF02321 Outer membrane efflux protein KM547_15545 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) KM547_15550 PF03279 Bacterial lipid A biosynthesis acyltransferase KM547_15575 PF05598 Transposase domain (DUF772) KM547_15585 PF03412 Peptidase C39 family KM547_15585 PF00005 ABC transporter KM547_15585 PF00664 ABC transporter transmembrane region KM547_15615 PF00529 HlyD membrane-fusion protein of T1SS KM547_15630 PF00390 Malic enzyme, N-terminal domain KM547_15630 PF03949 Malic enzyme, NAD binding domain KM547_15630 PF01515 Phosphate acetyl/butaryl transferase KM547_15635 PF00375 Sodium:dicarboxylate symporter family KM547_15645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM547_15645 PF00512 His Kinase A (phospho-acceptor) domain KM547_15670 PF00196 Bacterial regulatory proteins, luxR family KM547_15670 PF00072 Response regulator receiver domain KM547_15680 PF00512 His Kinase A (phospho-acceptor) domain KM547_15680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM547_15680 PF08521 Two-component sensor kinase N-terminal KM547_15685 PF00072 Response regulator receiver domain KM547_15685 PF00486 Transcriptional regulatory protein, C terminal KM547_15695 PF03600 Citrate transporter KM547_15700 PF00106 short chain dehydrogenase KM547_15705 PF00356 Bacterial regulatory proteins, lacI family KM547_15720 PF00128 Alpha amylase, catalytic domain KM547_15755 PF03193 RsgA GTPase KM547_15770 PF06594 Haemolysin-type calcium binding protein related domain KM547_15770 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) KM547_15780 PF05598 Transposase domain (DUF772) KM547_15805 PF00155 Aminotransferase class I and II KM547_15825 PF01522 Polysaccharide deacetylase KM547_15830 PF00462 Glutaredoxin KM547_15845 PF01979 Amidohydrolase family KM547_15850 PF01979 Amidohydrolase family KM547_15865 PF02645 Uncharacterised protein, DegV family COG1307 KM547_15875 PF00892 EamA-like transporter family KM547_15880 PF02567 Phenazine biosynthesis-like protein KM547_15885 PF00392 Bacterial regulatory proteins, gntR family KM547_15885 PF00155 Aminotransferase class I and II KM547_15890 PF00756 Putative esterase KM547_15895 PF04828 Glutathione-dependent formaldehyde-activating enzyme KM547_15900 PF00107 Zinc-binding dehydrogenase KM547_15900 PF08240 Alcohol dehydrogenase GroES-like domain KM547_15905 PF02583 Metal-sensitive transcriptional repressor KM547_15910 PF00486 Transcriptional regulatory protein, C terminal KM547_15910 PF00072 Response regulator receiver domain KM547_15915 PF16527 Two-component sensor protein CpxA, periplasmic domain KM547_15915 PF00672 HAMP domain KM547_15915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM547_15915 PF00512 His Kinase A (phospho-acceptor) domain KM547_15930 PF01527 Transposase KM547_15935 PF13333 Integrase core domain KM547_15935 PF00665 Integrase core domain KM547_15935 PF13276 HTH-like domain KM547_15945 PF04107 Glutamate-cysteine ligase family 2(GCS2) KM547_15955 PF12833 Helix-turn-helix domain KM547_15965 PF01926 50S ribosome-binding GTPase KM547_15970 PF00034 Cytochrome c KM547_15975 PF01323 DSBA-like thioredoxin domain KM547_15980 PF01323 DSBA-like thioredoxin domain KM547_16000 PF07715 TonB-dependent Receptor Plug Domain KM547_16000 PF00593 TonB dependent receptor KM547_16005 PF01464 Transglycosylase SLT domain KM547_16005 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain KM547_16010 PF01966 HD domain KM547_16010 PF01743 Poly A polymerase head domain KM547_16010 PF12627 Probable RNA and SrmB- binding site of polymerase A KM547_16015 PF05598 Transposase domain (DUF772) KM547_16030 PF05598 Transposase domain (DUF772) KM547_16045 PF05598 Transposase domain (DUF772) KM547_16055 PF00529 HlyD membrane-fusion protein of T1SS KM547_16055 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KM547_16060 PF02810 SEC-C motif KM547_16060 PF07517 SecA DEAD-like domain KM547_16060 PF01043 SecA preprotein cross-linking domain KM547_16060 PF07516 SecA Wing and Scaffold domain KM547_16065 PF01476 LysM domain KM547_16065 PF01551 Peptidase family M23 KM547_16065 PF08525 Opacity-associated protein A N-terminal motif KM547_16075 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase KM547_16080 PF12327 FtsZ family, C-terminal domain KM547_16080 PF00091 Tubulin/FtsZ family, GTPase domain KM547_16085 PF02491 SHS2 domain inserted in FTSA KM547_16090 PF08478 POTRA domain, FtsQ-type KM547_16090 PF03799 Cell division protein FtsQ KM547_16095 PF01820 D-ala D-ala ligase N-terminus KM547_16095 PF07478 D-ala D-ala ligase C-terminus KM547_16100 PF08245 Mur ligase middle domain KM547_16100 PF02875 Mur ligase family, glutamate ligase domain KM547_16100 PF01225 Mur ligase family, catalytic domain KM547_16105 PF03033 Glycosyltransferase family 28 N-terminal domain KM547_16105 PF04101 Glycosyltransferase family 28 C-terminal domain KM547_16110 PF01098 Cell cycle protein KM547_16115 PF00953 Glycosyl transferase family 4 KM547_16120 PF01225 Mur ligase family, catalytic domain KM547_16120 PF08245 Mur ligase middle domain KM547_16120 PF02875 Mur ligase family, glutamate ligase domain KM547_16125 PF02875 Mur ligase family, glutamate ligase domain KM547_16125 PF08245 Mur ligase middle domain KM547_16125 PF01225 Mur ligase family, catalytic domain KM547_16130 PF03717 Penicillin-binding Protein dimerisation domain KM547_16130 PF00905 Penicillin binding protein transpeptidase domain KM547_16135 PF04999 Cell division protein FtsL KM547_16140 PF01795 MraW methylase family KM547_16145 PF02381 MraZ protein, putative antitoxin-like KM547_16165 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KM547_16175 PF02021 Uncharacterised protein family UPF0102 KM547_16180 PF04307 LexA-binding, inner membrane-associated putative hydrolase KM547_16185 PF01565 FAD binding domain KM547_16185 PF02913 FAD linked oxidases, C-terminal domain KM547_16190 PF00486 Transcriptional regulatory protein, C terminal KM547_16190 PF00072 Response regulator receiver domain KM547_16195 PF13493 Domain of unknown function (DUF4118) KM547_16195 PF13492 GAF domain KM547_16195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM547_16195 PF00512 His Kinase A (phospho-acceptor) domain KM547_16195 PF02702 Osmosensitive K+ channel His kinase sensor domain KM547_16200 PF02669 K+-transporting ATPase, c chain KM547_16210 PF03814 Potassium-transporting ATPase A subunit KM547_16235 PF02769 AIR synthase related protein, C-terminal domain KM547_16235 PF00586 AIR synthase related protein, N-terminal domain KM547_16240 PF01029 NusB family KM547_16245 PF00885 6,7-dimethyl-8-ribityllumazine synthase KM547_16250 PF00925 GTP cyclohydrolase II KM547_16250 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KM547_16255 PF00677 Lumazine binding domain KM547_16260 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM547_16260 PF01872 RibD C-terminal domain KM547_16270 PF03477 ATP cone domain KM547_16275 PF00464 Serine hydroxymethyltransferase KM547_16300 PF00005 ABC transporter KM547_16300 PF12848 ABC transporter KM547_16305 PF01327 Polypeptide deformylase KM547_16350 PF13632 Glycosyl transferase family group 2 KM547_16350 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KM547_16360 PF02350 UDP-N-acetylglucosamine 2-epimerase KM547_16365 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KM547_16365 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain KM547_16400 PF07715 TonB-dependent Receptor Plug Domain KM547_16400 PF00593 TonB dependent receptor KM547_16410 PF00392 Bacterial regulatory proteins, gntR family KM547_16410 PF07702 UTRA domain KM547_16420 PF00263 Bacterial type II and III secretion system protein KM547_16420 PF03958 Bacterial type II/III secretion system short domain KM547_16430 PF10741 Type II secretion system (T2SS), protein M subtype b KM547_16435 PF05137 Fimbrial assembly protein (PilN) KM547_16440 PF03934 Type II secretion system (T2SS), protein K KM547_16450 PF07963 Prokaryotic N-terminal methylation motif KM547_16455 PF12019 Type II transport protein GspH KM547_16460 PF08334 Type II secretion system (T2SS), protein G KM547_16465 PF00482 Type II secretion system (T2SS), protein F KM547_16470 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KM547_16470 PF00437 Type II/IV secretion system protein KM547_16475 PF00082 Subtilase family KM547_16475 PF04151 Bacterial pre-peptidase C-terminal domain KM547_16480 PF05658 Head domain of trimeric autotransporter adhesin KM547_16480 PF05662 Coiled stalk of trimeric autotransporter adhesin KM547_16480 PF03895 YadA-like membrane anchor domain KM547_16480 PF13018 Extended Signal Peptide of Type V secretion system KM547_16485 PF02769 AIR synthase related protein, C-terminal domain KM547_16485 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain KM547_16485 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal KM547_16490 PF10411 Disulfide bond isomerase protein N-terminus KM547_16490 PF13098 Thioredoxin-like domain KM547_16495 PF02899 Phage integrase, N-terminal SAM-like domain KM547_16495 PF00589 Phage integrase family KM547_16520 PF00883 Cytosol aminopeptidase family, catalytic domain KM547_16520 PF02789 Cytosol aminopeptidase family, N-terminal domain KM547_16530 PF10458 Valyl tRNA synthetase tRNA binding arm KM547_16530 PF08264 Anticodon-binding domain of tRNA KM547_16530 PF00133 tRNA synthetases class I (I, L, M and V) KM547_16550 PF01066 CDP-alcohol phosphatidyltransferase KM547_16560 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM547_16560 PF04073 Aminoacyl-tRNA editing domain KM547_16560 PF03129 Anticodon binding domain KM547_16565 PF00816 H-NS histone family KM547_16575 PF02405 Permease MlaE KM547_16580 PF00005 ABC transporter KM547_16585 PF03886 ABC-type transport auxiliary lipoprotein component KM547_16585 PF02470 MlaD protein KM547_16605 PF14307 Glycosyltransferase WbsX KM547_16605 PF05045 Rhamnan synthesis protein F KM547_16610 PF01144 Coenzyme A transferase KM547_16615 PF01144 Coenzyme A transferase KM547_16620 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KM547_16620 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KM547_16620 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KM547_16620 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KM547_16625 PF01050 Mannose-6-phosphate isomerase KM547_16625 PF00483 Nucleotidyl transferase KM547_16630 PF04321 RmlD substrate binding domain KM547_16635 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase KM547_16640 PF00483 Nucleotidyl transferase KM547_16645 PF16363 GDP-mannose 4,6 dehydratase KM547_16650 PF01012 Electron transfer flavoprotein domain KM547_16655 PF01012 Electron transfer flavoprotein domain KM547_16655 PF00766 Electron transfer flavoprotein FAD-binding domain KM547_16665 PF01040 UbiA prenyltransferase family KM547_16670 PF04030 D-arabinono-1,4-lactone oxidase KM547_16670 PF01565 FAD binding domain KM547_16675 PF00106 short chain dehydrogenase KM547_16680 PF01370 NAD dependent epimerase/dehydratase family KM547_16695 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KM547_16695 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM547_16735 PF00535 Glycosyl transferase family 2 KM547_16740 PF00535 Glycosyl transferase family 2 KM547_16745 PF00398 Ribosomal RNA adenine dimethylase KM547_16750 PF00005 ABC transporter KM547_16760 PF01053 Cys/Met metabolism PLP-dependent enzyme KM547_16765 PF00571 CBS domain KM547_16765 PF00291 Pyridoxal-phosphate dependent enzyme KM547_16785 PF00437 Type II/IV secretion system protein KM547_16790 PF14497 Glutathione S-transferase, C-terminal domain KM547_16790 PF02798 Glutathione S-transferase, N-terminal domain KM547_16800 PF00270 DEAD/DEAH box helicase KM547_16800 PF00271 Helicase conserved C-terminal domain KM547_16805 PF01242 6-pyruvoyl tetrahydropterin synthase KM547_16820 PF13185 GAF domain KM547_16830 PF07715 TonB-dependent Receptor Plug Domain KM547_16830 PF00593 TonB dependent receptor KM547_16835 PF13419 Haloacid dehalogenase-like hydrolase KM547_16840 PF00817 impB/mucB/samB family KM547_16840 PF11798 IMS family HHH motif KM547_16840 PF11799 impB/mucB/samB family C-terminal domain KM547_16845 PF07977 FabA-like domain KM547_16850 PF00109 Beta-ketoacyl synthase, N-terminal domain KM547_16850 PF02801 Beta-ketoacyl synthase, C-terminal domain KM547_16860 PF01432 Peptidase family M3 KM547_16865 PF00291 Pyridoxal-phosphate dependent enzyme KM547_16875 PF00403 Heavy-metal-associated domain KM547_16880 PF00376 MerR family regulatory protein KM547_16880 PF09278 MerR, DNA binding KM547_16890 PF00394 Multicopper oxidase KM547_16890 PF07731 Multicopper oxidase KM547_16890 PF07732 Multicopper oxidase KM547_16895 PF05275 Copper resistance protein B precursor (CopB) KM547_16910 PF01380 SIS domain KM547_16920 PF00005 ABC transporter KM547_16935 PF14602 Hexapeptide repeat of succinyl-transferase KM547_16935 PF12804 MobA-like NTP transferase domain KM547_16935 PF00132 Bacterial transferase hexapeptide (six repeats) KM547_16950 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain KM547_16950 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain KM547_16955 PF02874 ATP synthase alpha/beta family, beta-barrel domain KM547_16955 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KM547_16960 PF00231 ATP synthase KM547_16965 PF00306 ATP synthase alpha/beta chain, C terminal domain KM547_16965 PF02874 ATP synthase alpha/beta family, beta-barrel domain KM547_16965 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KM547_16970 PF00213 ATP synthase delta (OSCP) subunit KM547_16975 PF00430 ATP synthase B/B' CF(0) KM547_16980 PF00137 ATP synthase subunit C KM547_16985 PF00119 ATP synthase A chain KM547_17000 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM547_17000 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM547_17005 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KM547_17005 PF02817 e3 binding domain KM547_17005 PF00364 Biotin-requiring enzyme KM547_17030 PF03180 NLPA lipoprotein KM547_17035 PF00528 Binding-protein-dependent transport system inner membrane component KM547_17040 PF00005 ABC transporter KM547_17040 PF09383 NIL domain KM547_17045 PF00892 EamA-like transporter family KM547_17050 PF04461 Protein of unknown function (DUF520) KM547_17060 PF00849 RNA pseudouridylate synthase KM547_17060 PF01479 S4 domain KM547_17065 PF05175 Methyltransferase small domain KM547_17065 PF08468 Methyltransferase small domain N-terminal KM547_17075 PF07995 Glucose / Sorbosone dehydrogenase KM547_17085 PF00512 His Kinase A (phospho-acceptor) domain KM547_17085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM547_17085 PF01627 Hpt domain KM547_17085 PF00989 PAS fold KM547_17085 PF00072 Response regulator receiver domain KM547_17085 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM547_17105 PF01168 Alanine racemase, N-terminal domain KM547_17105 PF00842 Alanine racemase, C-terminal domain KM547_17110 PF01266 FAD dependent oxidoreductase KM547_17115 PF01037 Lrp/AsnC ligand binding domain KM547_17130 PF01641 SelR domain KM547_17135 PF01618 MotA/TolQ/ExbB proton channel family KM547_17140 PF13677 Membrane MotB of proton-channel complex MotA/MotB KM547_17140 PF00691 OmpA family KM547_17190 PF01061 ABC-2 type transporter KM547_17195 PF00005 ABC transporter KM547_17200 PF00999 Sodium/hydrogen exchanger family KM547_17205 PF05711 Macrocin-O-methyltransferase (TylF) KM547_17210 PF03167 Uracil DNA glycosylase superfamily KM547_17220 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase KM547_17225 PF03466 LysR substrate binding domain KM547_17225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM547_17230 PF03358 NADPH-dependent FMN reductase KM547_17245 PF00248 Aldo/keto reductase family KM547_17255 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KM547_17255 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KM547_17280 PF17151 Periplasmic sensor domain KM547_17280 PF00990 Diguanylate cyclase, GGDEF domain KM547_17290 PF00563 EAL domain KM547_17290 PF00990 Diguanylate cyclase, GGDEF domain KM547_17290 PF08447 PAS fold KM547_17290 PF08448 PAS fold KM547_17310 PF08889 WbqC-like protein family KM547_17315 PF00535 Glycosyl transferase family 2 KM547_17320 PF13649 Methyltransferase domain KM547_17330 PF00892 EamA-like transporter family KM547_17340 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KM547_17350 PF00593 TonB dependent receptor KM547_17350 PF07715 TonB-dependent Receptor Plug Domain KM547_17375 PF13520 Amino acid permease KM547_17385 PF00553 Cellulose binding domain KM547_17385 PF00150 Cellulase (glycosyl hydrolase family 5) KM547_17390 PF00675 Insulinase (Peptidase family M16) KM547_17390 PF05193 Peptidase M16 inactive domain KM547_17395 PF01204 Trehalase KM547_17400 PF01464 Transglycosylase SLT domain KM547_17410 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM547_17415 PF06719 AraC-type transcriptional regulator N-terminus KM547_17415 PF12833 Helix-turn-helix domain KM547_17425 PF01544 CorA-like Mg2+ transporter protein KM547_17430 PF00324 Amino acid permease KM547_17440 PF00892 EamA-like transporter family KM547_17450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM547_17450 PF03466 LysR substrate binding domain KM547_17455 PF02525 Flavodoxin-like fold KM547_17460 PF07759 Protein of unknown function (DUF1615) KM547_17465 PF02449 Beta-galactosidase KM547_17465 PF08532 Beta-galactosidase trimerisation domain KM547_17465 PF08533 Beta-galactosidase C-terminal domain KM547_17470 PF00561 alpha/beta hydrolase fold KM547_17550 PF05598 Transposase domain (DUF772) KM547_17565 PF00004 ATPase family associated with various cellular activities (AAA) KM547_17570 PF17831 Pyruvate dehydrogenase E1 component middle domain KM547_17570 PF00456 Transketolase, thiamine diphosphate binding domain KM547_17575 PF02743 Cache domain KM547_17575 PF00672 HAMP domain KM547_17575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM547_17615 PF04264 YceI-like domain KM547_17620 PF00881 Nitroreductase family KM547_17635 PF05598 Transposase domain (DUF772) KM547_17645 PF03009 Glycerophosphoryl diester phosphodiesterase family KM547_17660 PF08335 GlnD PII-uridylyltransferase KM547_17660 PF03710 Glutamate-ammonia ligase adenylyltransferase KM547_17670 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain KM547_17670 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain KM547_17675 PF01541 GIY-YIG catalytic domain KM547_17680 PF00793 DAHP synthetase I family KM547_17685 PF00118 TCP-1/cpn60 chaperonin family KM547_17690 PF00166 Chaperonin 10 Kd subunit KM547_17700 PF03091 CutA1 divalent ion tolerance protein KM547_17705 PF02683 Cytochrome C biogenesis protein transmembrane region KM547_17705 PF11412 Disulphide bond corrector protein DsbC KM547_17710 PF00578 AhpC/TSA family KM547_17720 PF01220 Dehydroquinase class II KM547_17725 PF00364 Biotin-requiring enzyme KM547_17730 PF02785 Biotin carboxylase C-terminal domain KM547_17730 PF00289 Biotin carboxylase, N-terminal domain KM547_17730 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KM547_17755 PF01381 Helix-turn-helix KM547_17765 PF02954 Bacterial regulatory protein, Fis family KM547_17805 PF12146 Serine aminopeptidase, S33 KM547_17805 PF12147 Putative methyltransferase KM547_17810 PF01066 CDP-alcohol phosphatidyltransferase KM547_17815 PF02142 MGS-like domain KM547_17815 PF01808 AICARFT/IMPCHase bienzyme KM547_17820 PF02844 Phosphoribosylglycinamide synthetase, N domain KM547_17820 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KM547_17820 PF02843 Phosphoribosylglycinamide synthetase, C domain KM547_17825 PF12805 FUSC-like inner membrane protein yccS KM547_17830 PF07690 Major Facilitator Superfamily KM547_17835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM547_17835 PF03466 LysR substrate binding domain KM547_17865 PF00293 NUDIX domain KM547_17865 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain KM547_17865 PF09297 NADH pyrophosphatase zinc ribbon domain KM547_17870 PF01521 Iron-sulphur cluster biosynthesis KM547_17890 PF00990 Diguanylate cyclase, GGDEF domain KM547_17890 PF00563 EAL domain KM547_17890 PF00072 Response regulator receiver domain KM547_17895 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KM547_17895 PF00072 Response regulator receiver domain KM547_17895 PF01627 Hpt domain KM547_17895 PF00512 His Kinase A (phospho-acceptor) domain KM547_17895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM547_17895 PF00672 HAMP domain KM547_17900 PF00210 Ferritin-like domain KM547_17905 PF04324 BFD-like [2Fe-2S] binding domain KM547_17910 PF00293 NUDIX domain KM547_17925 PF00380 Ribosomal protein S9/S16 KM547_17930 PF00572 Ribosomal protein L13 KM547_17935 PF03232 Ubiquinone biosynthesis protein COQ7 KM547_17945 PF00893 Small Multidrug Resistance protein KM547_17950 PF02675 S-adenosylmethionine decarboxylase KM547_17955 PF00027 Cyclic nucleotide-binding domain KM547_17955 PF00325 Bacterial regulatory proteins, crp family KM547_17960 PF01925 Sulfite exporter TauE/SafE KM547_17965 PF03425 Carbohydrate binding domain (family 11) KM547_17965 PF00150 Cellulase (glycosyl hydrolase family 5) KM547_17965 PF00404 Dockerin type I domain KM547_17965 PF02156 Glycosyl hydrolase family 26 KM547_17975 PF00218 Indole-3-glycerol phosphate synthase KM547_17980 PF02885 Glycosyl transferase family, helical bundle domain KM547_17980 PF00591 Glycosyl transferase family, a/b domain KM547_17985 PF00117 Glutamine amidotransferase class-I KM547_17995 PF04715 Anthranilate synthase component I, N terminal region KM547_17995 PF00425 chorismate binding enzyme KM547_18000 PF00781 Diacylglycerol kinase catalytic domain KM547_18005 PF00583 Acetyltransferase (GNAT) family KM547_18010 PF00834 Ribulose-phosphate 3 epimerase family KM547_18015 PF05099 Tellurite resistance protein TerB KM547_18015 PF00226 DnaJ domain KM547_18020 PF01259 SAICAR synthetase KM547_18035 PF00182 Chitinase class I KM547_18045 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family KM547_18050 PF13244 Domain of unknown function (DUF4040) KM547_18050 PF00361 Proton-conducting membrane transporter KM547_18050 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KM547_18050 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter KM547_18055 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KM547_18060 PF00361 Proton-conducting membrane transporter KM547_18070 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) KM547_18075 PF03334 Na+/H+ antiporter subunit KM547_18080 PF01699 Sodium/calcium exchanger protein KM547_18095 PF04209 homogentisate 1,2-dioxygenase KM547_18100 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM547_18120 PF00854 POT family KM547_18125 PF03301 Tryptophan 2,3-dioxygenase KM547_18135 PF00676 Dehydrogenase E1 component KM547_18140 PF02779 Transketolase, pyrimidine binding domain KM547_18140 PF02780 Transketolase, C-terminal domain KM547_18150 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KM547_18150 PF00364 Biotin-requiring enzyme KM547_18150 PF02817 e3 binding domain KM547_18160 PF07504 Fungalysin/Thermolysin Propeptide Motif KM547_18160 PF03413 Peptidase propeptide and YPEB domain KM547_18160 PF01447 Thermolysin metallopeptidase, catalytic domain KM547_18160 PF02868 Thermolysin metallopeptidase, alpha-helical domain KM547_18160 PF04151 Bacterial pre-peptidase C-terminal domain KM547_18165 PF00271 Helicase conserved C-terminal domain KM547_18165 PF00270 DEAD/DEAH box helicase KM547_18180 PF00294 pfkB family carbohydrate kinase KM547_18185 PF02308 MgtC family KM547_18200 PF00990 Diguanylate cyclase, GGDEF domain KM547_18205 PF05661 Protein of unknown function (DUF808) KM547_18210 PF02733 Dak1 domain KM547_18210 PF02734 DAK2 domain KM547_18225 PF00924 Mechanosensitive ion channel KM547_18225 PF12795 Mechanosensitive ion channel porin domain KM547_18225 PF12794 Mechanosensitive ion channel inner membrane domain 1 KM547_18230 PF00698 Acyl transferase domain KM547_18230 PF08240 Alcohol dehydrogenase GroES-like domain KM547_18230 PF00109 Beta-ketoacyl synthase, N-terminal domain KM547_18230 PF02801 Beta-ketoacyl synthase, C-terminal domain KM547_18230 PF08659 KR domain KM547_18230 PF00550 Phosphopantetheine attachment site KM547_18230 PF14765 Polyketide synthase dehydratase KM547_18230 PF16197 Ketoacyl-synthetase C-terminal extension KM547_18230 PF00107 Zinc-binding dehydrogenase KM547_18235 PF00328 Histidine phosphatase superfamily (branch 2) KM547_18250 PF04542 Sigma-70 region 2 KM547_18250 PF08281 Sigma-70, region 4 KM547_18250 PF12680 SnoaL-like domain KM547_18255 PF05726 Pirin C-terminal cupin domain KM547_18255 PF02678 Pirin KM547_18265 PF07729 FCD domain KM547_18265 PF00392 Bacterial regulatory proteins, gntR family KM547_18280 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase KM547_18285 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG KM547_18295 PF01039 Carboxyl transferase domain KM547_18300 PF06857 Malonate decarboxylase delta subunit (MdcD) KM547_18305 PF16957 Malonate decarboxylase, alpha subunit, transporter KM547_18315 PF09339 IclR helix-turn-helix domain KM547_18315 PF01614 Bacterial transcriptional regulator KM547_18320 PF07690 Major Facilitator Superfamily KM547_18325 PF05336 L-rhamnose mutarotase KM547_18335 PF13378 Enolase C-terminal domain-like KM547_18335 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KM547_18340 PF01557 Fumarylacetoacetate (FAA) hydrolase family KM547_18355 PF00248 Aldo/keto reductase family KM547_18360 PF13419 Haloacid dehalogenase-like hydrolase KM547_18370 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KM547_18370 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KM547_18375 PF00230 Major intrinsic protein KM547_18380 PF16901 C-terminal domain of alpha-glycerophosphate oxidase KM547_18380 PF01266 FAD dependent oxidoreductase KM547_18385 PF08220 DeoR-like helix-turn-helix domain KM547_18385 PF00455 DeoR C terminal sensor domain KM547_18390 PF07308 Protein of unknown function (DUF1456) KM547_18400 PF00013 KH domain KM547_18400 PF12072 Domain of unknown function (DUF3552) KM547_18400 PF01966 HD domain KM547_18405 PF00403 Heavy-metal-associated domain KM547_18405 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM547_18405 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM547_18415 PF03372 Endonuclease/Exonuclease/phosphatase family KM547_18445 PF00593 TonB dependent receptor KM547_18445 PF07715 TonB-dependent Receptor Plug Domain KM547_18465 PF05598 Transposase domain (DUF772) KM547_18470 PF01381 Helix-turn-helix KM547_18470 PF06114 IrrE N-terminal-like domain KM547_18470 PF09856 Predicted transcriptional regulator (DUF2083) KM547_18490 PF13538 UvrD-like helicase C-terminal domain KM547_18495 PF13361 UvrD-like helicase C-terminal domain KM547_18495 PF12705 PD-(D/E)XK nuclease superfamily KM547_18495 PF00580 UvrD/REP helicase N-terminal domain KM547_18500 PF17946 RecC C-terminal domain KM547_18505 PF00005 ABC transporter KM547_18510 PF02405 Permease MlaE KM547_18515 PF02470 MlaD protein KM547_18530 PF04333 MlaA lipoprotein KM547_18545 PF00255 Glutathione peroxidase KM547_18550 PF02646 RmuC family KM547_18565 PF02308 MgtC family KM547_18570 PF13493 Domain of unknown function (DUF4118) KM547_18570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM547_18570 PF00989 PAS fold KM547_18570 PF08447 PAS fold KM547_18570 PF13426 PAS domain KM547_18570 PF00512 His Kinase A (phospho-acceptor) domain KM547_18575 PF00196 Bacterial regulatory proteins, luxR family KM547_18575 PF00072 Response regulator receiver domain KM547_18580 PF13520 Amino acid permease KM547_18585 PF10947 Protein of unknown function (DUF2628) KM547_18590 PF02595 Glycerate kinase family KM547_18655 PF13180 PDZ domain KM547_18655 PF00595 PDZ domain KM547_18675 PF01594 AI-2E family transporter KM547_18680 PF13419 Haloacid dehalogenase-like hydrolase KM547_18685 PF02789 Cytosol aminopeptidase family, N-terminal domain KM547_18685 PF00883 Cytosol aminopeptidase family, catalytic domain KM547_18695 PF00199 Catalase KM547_18705 PF00072 Response regulator receiver domain KM547_18705 PF00196 Bacterial regulatory proteins, luxR family KM547_18710 PF07730 Histidine kinase KM547_18720 PF00005 ABC transporter KM547_18730 PF00005 ABC transporter KM547_18735 PF12704 MacB-like periplasmic core domain KM547_18735 PF02687 FtsX-like permease family KM547_18750 PF00892 EamA-like transporter family KM547_18755 PF00892 EamA-like transporter family KM547_18770 PF00579 tRNA synthetases class I (W and Y) KM547_18780 PF05532 CsbD-like KM547_18795 PF00491 Arginase family KM547_18810 PF03309 Type III pantothenate kinase KM547_18815 PF02237 Biotin protein ligase C terminal domain KM547_18815 PF03099 Biotin/lipoate A/B protein ligase family KM547_18825 PF06167 Glucose-regulated metallo-peptidase M90 KM547_18840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM547_18845 PF00072 Response regulator receiver domain KM547_18845 PF00486 Transcriptional regulatory protein, C terminal KM547_18855 PF01207 Dihydrouridine synthase (Dus) KM547_18860 PF01717 Cobalamin-independent synthase, Catalytic domain KM547_18860 PF08267 Cobalamin-independent synthase, N-terminal domain KM547_18870 PF00551 Formyl transferase KM547_18880 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KM547_18880 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KM547_18885 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KM547_18890 PF02146 Sir2 family KM547_18895 PF07690 Major Facilitator Superfamily KM547_18900 PF03466 LysR substrate binding domain KM547_18900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM547_18920 PF00268 Ribonucleotide reductase, small chain KM547_18925 PF00317 Ribonucleotide reductase, all-alpha domain KM547_18925 PF02867 Ribonucleotide reductase, barrel domain KM547_18925 PF03477 ATP cone domain KM547_18930 PF02146 Sir2 family KM547_18935 PF02566 OsmC-like protein KM547_18940 PF01047 MarR family KM547_18955 PF01494 FAD binding domain KM547_18960 PF00535 Glycosyl transferase family 2 KM547_18970 PF00109 Beta-ketoacyl synthase, N-terminal domain KM547_18970 PF02801 Beta-ketoacyl synthase, C-terminal domain KM547_18975 PF05166 YcgL domain KM547_19005 PF00723 Glycosyl hydrolases family 15 KM547_19010 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain KM547_19010 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain KM547_19015 PF13607 Succinyl-CoA ligase like flavodoxin domain KM547_19015 PF13380 CoA binding domain KM547_19015 PF00583 Acetyltransferase (GNAT) family KM547_19030 PF00313 'Cold-shock' DNA-binding domain KM547_19040 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KM547_19040 PF00364 Biotin-requiring enzyme KM547_19040 PF00289 Biotin carboxylase, N-terminal domain KM547_19040 PF02785 Biotin carboxylase C-terminal domain KM547_19045 PF01039 Carboxyl transferase domain KM547_19050 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM547_19050 PF02770 Acyl-CoA dehydrogenase, middle domain KM547_19050 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM547_19060 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KM547_19070 PF02694 Uncharacterised BCR, YnfA/UPF0060 family KM547_19095 PF03969 AFG1-like ATPase KM547_19120 PF07977 FabA-like domain KM547_19135 PF00550 Phosphopantetheine attachment site KM547_19140 PF04820 Tryptophan halogenase KM547_19155 PF02322 Cytochrome bd terminal oxidase subunit II KM547_19160 PF01654 Cytochrome bd terminal oxidase subunit I KM547_19175 PF00296 Luciferase-like monooxygenase KM547_19180 PF01218 Coproporphyrinogen III oxidase KM547_19190 PF04239 Protein of unknown function (DUF421) KM547_19195 PF00476 DNA polymerase family A KM547_19195 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KM547_19195 PF01367 5'-3' exonuclease, C-terminal SAM fold KM547_19195 PF01612 3'-5' exonuclease KM547_19210 PF00582 Universal stress protein family KM547_19215 PF14602 Hexapeptide repeat of succinyl-transferase KM547_19215 PF12464 Maltose acetyltransferase KM547_19225 PF00580 UvrD/REP helicase N-terminal domain KM547_19225 PF13361 UvrD-like helicase C-terminal domain KM547_19235 PF13091 PLD-like domain KM547_19235 PF13396 Phospholipase_D-nuclease N-terminal KM547_19240 PF00471 Ribosomal protein L33 KM547_19245 PF00830 Ribosomal L28 family KM547_19255 PF00873 AcrB/AcrD/AcrF family KM547_19260 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KM547_19290 PF00535 Glycosyl transferase family 2 KM547_19295 PF01370 NAD dependent epimerase/dehydratase family KM547_19300 PF02195 ParB-like nuclease domain KM547_19300 PF17762 HTH domain found in ParB protein KM547_19305 PF13614 AAA domain KM547_19310 PF02527 rRNA small subunit methyltransferase G KM547_19315 PF01648 4'-phosphopantetheinyl transferase superfamily KM547_19320 PF04226 Transglycosylase associated protein KM547_19335 PF00171 Aldehyde dehydrogenase family KM547_19340 PF07690 Major Facilitator Superfamily KM547_19340 PF00083 Sugar (and other) transporter KM547_19350 PF00501 AMP-binding enzyme KM547_19350 PF13193 AMP-binding enzyme C-terminal domain KM547_19350 PF16177 Acetyl-coenzyme A synthetase N-terminus KM547_19355 PF00072 Response regulator receiver domain KM547_19355 PF00196 Bacterial regulatory proteins, luxR family KM547_19370 PF02659 Putative manganese efflux pump KM547_19375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM547_19375 PF00512 His Kinase A (phospho-acceptor) domain KM547_19380 PF00004 ATPase family associated with various cellular activities (AAA) KM547_19380 PF17862 AAA+ lid domain KM547_19380 PF01434 Peptidase family M41 KM547_19385 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain KM547_19385 PF06165 Glycosyltransferase family 36 KM547_19405 PF00982 Glycosyltransferase family 20 KM547_19410 PF05598 Transposase domain (DUF772) KM547_19420 PF04357 TamB, inner membrane protein subunit of TAM complex KM547_19425 PF17243 POTRA domain TamA domain 1 KM547_19425 PF07244 Surface antigen variable number repeat KM547_19425 PF01103 Surface antigen KM547_19445 PF04337 Protein of unknown function, DUF480 KM547_19455 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain KM547_19455 PF13018 Extended Signal Peptide of Type V secretion system KM547_19455 PF05594 Haemagluttinin repeat KM547_19455 PF13332 Hemagglutinin repeat KM547_19455 PF05860 haemagglutination activity domain KM547_19485 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KM547_19490 PF04820 Tryptophan halogenase KM547_19500 PF00356 Bacterial regulatory proteins, lacI family KM547_19510 PF01553 Acyltransferase KM547_19530 PF04616 Glycosyl hydrolases family 43 KM547_19550 PF00553 Cellulose binding domain KM547_19550 PF00331 Glycosyl hydrolase family 10 KM547_19550 PF03422 Carbohydrate binding module (family 6) KM547_19555 PF02614 Glucuronate isomerase KM547_19560 PF00331 Glycosyl hydrolase family 10 KM547_19590 PF08125 Mannitol dehydrogenase C-terminal domain KM547_19590 PF01232 Mannitol dehydrogenase Rossmann domain KM547_19595 PF07691 PA14 domain KM547_19595 PF14310 Fibronectin type III-like domain KM547_19595 PF00933 Glycosyl hydrolase family 3 N terminal domain KM547_19595 PF01915 Glycosyl hydrolase family 3 C-terminal domain KM547_19600 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain KM547_19600 PF04616 Glycosyl hydrolases family 43 KM547_19605 PF13378 Enolase C-terminal domain-like KM547_19605 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KM547_19615 PF03648 Glycosyl hydrolase family 67 N-terminus KM547_19615 PF07488 Glycosyl hydrolase family 67 middle domain KM547_19615 PF07477 Glycosyl hydrolase family 67 C-terminus KM547_19620 PF00356 Bacterial regulatory proteins, lacI family KM547_19630 PF01171 PP-loop family KM547_19635 PF04381 Putative exonuclease, RdgC KM547_19645 PF12697 Alpha/beta hydrolase family KM547_19650 PF00762 Ferrochelatase KM547_19660 PF02416 mttA/Hcf106 family KM547_19665 PF02416 mttA/Hcf106 family KM547_19670 PF00902 Sec-independent protein translocase protein (TatC) KM547_19680 PF00958 GMP synthase C terminal domain KM547_19680 PF00117 Glutamine amidotransferase class-I KM547_19685 PF00437 Type II/IV secretion system protein KM547_19685 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KM547_19690 PF02091 Glycyl-tRNA synthetase alpha subunit KM547_19695 PF05746 DALR anticodon binding domain KM547_19695 PF02092 Glycyl-tRNA synthetase beta subunit KM547_19700 PF00580 UvrD/REP helicase N-terminal domain KM547_19700 PF13361 UvrD-like helicase C-terminal domain KM547_19705 PF00265 Thymidine kinase KM547_19715 PF04349 Periplasmic glucan biosynthesis protein, MdoG KM547_19725 PF06827 Zinc finger found in FPG and IleRS KM547_19725 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KM547_19725 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KM547_19740 PF00005 ABC transporter KM547_19745 PF01926 50S ribosome-binding GTPase KM547_19745 PF12631 MnmE helical domain KM547_19745 PF10396 GTP-binding protein TrmE N-terminus KM547_19750 PF02096 60Kd inner membrane protein KM547_19750 PF14849 YidC periplasmic domain KM547_19755 PF00825 Ribonuclease P KM547_19760 PF00468 Ribosomal protein L34