locus-tag class description KBQ49_00030 PF02534 Type IV secretory system Conjugative DNA transfer KBQ49_00040 PF00561 alpha/beta hydrolase fold KBQ49_00055 PF00293 NUDIX domain KBQ49_00085 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KBQ49_00085 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KBQ49_00105 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch KBQ49_00110 PF02233 NAD(P) transhydrogenase beta subunit KBQ49_00125 PF01063 Amino-transferase class IV KBQ49_00130 PF00082 Subtilase family KBQ49_00130 PF04151 Bacterial pre-peptidase C-terminal domain KBQ49_00160 PF03358 NADPH-dependent FMN reductase KBQ49_00165 PF03631 Virulence factor BrkB KBQ49_00170 PF08534 Redoxin KBQ49_00175 PF00708 Acylphosphatase KBQ49_00185 PF03976 Polyphosphate kinase 2 (PPK2) KBQ49_00195 PF00994 Probable molybdopterin binding domain KBQ49_00200 PF00553 Cellulose binding domain KBQ49_00200 PF00041 Fibronectin type III domain KBQ49_00200 PF01341 Glycosyl hydrolases family 6 KBQ49_00250 PF15457 Type III T3SS secreted effector HopW1-1/HopPmaA KBQ49_00255 PF01301 Glycosyl hydrolases family 35 KBQ49_00260 PF17678 Glycosyl hydrolase family 92 N-terminal domain KBQ49_00260 PF07971 Glycosyl hydrolase family 92 KBQ49_00285 PF07691 PA14 domain KBQ49_00285 PF14310 Fibronectin type III-like domain KBQ49_00285 PF00933 Glycosyl hydrolase family 3 N terminal domain KBQ49_00285 PF01915 Glycosyl hydrolase family 3 C-terminal domain KBQ49_00295 PF02838 Glycosyl hydrolase family 20, domain 2 KBQ49_00295 PF00728 Glycosyl hydrolase family 20, catalytic domain KBQ49_00295 PF07691 PA14 domain KBQ49_00300 PF01476 LysM domain KBQ49_00300 PF00704 Glycosyl hydrolases family 18 KBQ49_00315 PF02685 Glucokinase KBQ49_00325 PF04452 RNA methyltransferase KBQ49_00330 PF00202 Aminotransferase class-III KBQ49_00335 PF00293 NUDIX domain KBQ49_00340 PF00459 Inositol monophosphatase family KBQ49_00345 PF03819 MazG nucleotide pyrophosphohydrolase domain KBQ49_00350 PF02694 Uncharacterised BCR, YnfA/UPF0060 family KBQ49_00355 PF01145 SPFH domain / Band 7 family KBQ49_00355 PF16200 C-terminal region of band_7 KBQ49_00365 PF01571 Aminomethyltransferase folate-binding domain KBQ49_00365 PF08669 Glycine cleavage T-protein C-terminal barrel domain KBQ49_00370 PF01597 Glycine cleavage H-protein KBQ49_00390 PF00892 EamA-like transporter family KBQ49_00395 PF00732 GMC oxidoreductase KBQ49_00395 PF05199 GMC oxidoreductase KBQ49_00410 PF00067 Cytochrome P450 KBQ49_00415 PF00067 Cytochrome P450 KBQ49_00420 PF00067 Cytochrome P450 KBQ49_00435 PF00067 Cytochrome P450 KBQ49_00440 PF00348 Polyprenyl synthetase KBQ49_00455 PF01070 FMN-dependent dehydrogenase KBQ49_00460 PF02770 Acyl-CoA dehydrogenase, middle domain KBQ49_00460 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KBQ49_00460 PF09317 Domain of unknown function (DUF1974) KBQ49_00460 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KBQ49_00470 PF00440 Bacterial regulatory proteins, tetR family KBQ49_00475 PF07715 TonB-dependent Receptor Plug Domain KBQ49_00475 PF00593 TonB dependent receptor KBQ49_00485 PF01430 Hsp33 protein KBQ49_00490 PF00912 Transglycosylase KBQ49_00495 PF00535 Glycosyl transferase family 2 KBQ49_00500 PF00571 CBS domain KBQ49_00505 PF05170 AsmA family KBQ49_00510 PF03006 Haemolysin-III related KBQ49_00515 PF00009 Elongation factor Tu GTP binding domain KBQ49_00515 PF16658 Class II release factor RF3, C-terminal domain KBQ49_00525 PF00561 alpha/beta hydrolase fold KBQ49_00530 PF01053 Cys/Met metabolism PLP-dependent enzyme KBQ49_00535 PF03447 Homoserine dehydrogenase, NAD binding domain KBQ49_00535 PF00742 Homoserine dehydrogenase KBQ49_00535 PF00696 Amino acid kinase family KBQ49_00540 PF00561 alpha/beta hydrolase fold KBQ49_00540 PF08386 TAP-like protein KBQ49_00545 PF00990 Diguanylate cyclase, GGDEF domain KBQ49_00550 PF03313 Serine dehydratase alpha chain KBQ49_00550 PF03315 Serine dehydratase beta chain KBQ49_00565 PF01292 Prokaryotic cytochrome b561 KBQ49_00575 PF00072 Response regulator receiver domain KBQ49_00575 PF01627 Hpt domain KBQ49_00575 PF00512 His Kinase A (phospho-acceptor) domain KBQ49_00575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KBQ49_00575 PF00672 HAMP domain KBQ49_00575 PF17149 Periplasmic sensor domain found in signal transduction proteins KBQ49_00580 PF00672 HAMP domain KBQ49_00580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KBQ49_00580 PF17149 Periplasmic sensor domain found in signal transduction proteins KBQ49_00580 PF01627 Hpt domain KBQ49_00580 PF00072 Response regulator receiver domain KBQ49_00580 PF00512 His Kinase A (phospho-acceptor) domain KBQ49_00585 PF07690 Major Facilitator Superfamily KBQ49_00590 PF01208 Uroporphyrinogen decarboxylase (URO-D) KBQ49_00600 PF13533 Biotin-lipoyl like KBQ49_00605 PF00873 AcrB/AcrD/AcrF family KBQ49_00610 PF02321 Outer membrane efflux protein KBQ49_00615 PF01761 3-dehydroquinate synthase KBQ49_00620 PF01202 Shikimate kinase KBQ49_00625 PF01243 Pyridoxamine 5'-phosphate oxidase KBQ49_00625 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region KBQ49_00630 PF00583 Acetyltransferase (GNAT) family KBQ49_00645 PF00376 MerR family regulatory protein KBQ49_00645 PF09278 MerR, DNA binding KBQ49_00655 PF14748 Pyrroline-5-carboxylate reductase dimerisation KBQ49_00655 PF03807 NADP oxidoreductase coenzyme F420-dependent KBQ49_00665 PF01168 Alanine racemase, N-terminal domain KBQ49_00670 PF00437 Type II/IV secretion system protein KBQ49_00675 PF00437 Type II/IV secretion system protein KBQ49_00680 PF00958 GMP synthase C terminal domain KBQ49_00680 PF00117 Glutamine amidotransferase class-I KBQ49_00680 PF03352 Methyladenine glycosylase KBQ49_00680 PF13302 Acetyltransferase (GNAT) domain KBQ49_00680 PF13673 Acetyltransferase (GNAT) domain KBQ49_00690 PF02622 Uncharacterized ACR, COG1678 KBQ49_00695 PF03652 Holliday junction resolvase KBQ49_00700 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KBQ49_00700 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KBQ49_00715 PF02203 Tar ligand binding domain homologue KBQ49_00715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KBQ49_00715 PF00672 HAMP domain KBQ49_00725 PF00324 Amino acid permease KBQ49_00730 PF03600 Citrate transporter KBQ49_00745 PF00571 CBS domain KBQ49_00745 PF01769 Divalent cation transporter KBQ49_00745 PF03448 MgtE intracellular N domain KBQ49_00750 PF05524 PEP-utilising enzyme, N-terminal KBQ49_00750 PF00391 PEP-utilising enzyme, mobile domain KBQ49_00750 PF02896 PEP-utilising enzyme, TIM barrel domain KBQ49_00755 PF00381 PTS HPr component phosphorylation site KBQ49_00765 PF03668 P-loop ATPase protein family KBQ49_00770 PF07475 HPr Serine kinase C-terminal domain KBQ49_00770 PF02603 HPr Serine kinase N terminus KBQ49_00775 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KBQ49_00780 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KBQ49_00785 PF04963 Sigma-54 factor, core binding domain KBQ49_00785 PF00309 Sigma-54 factor, Activator interacting domain (AID) KBQ49_00785 PF04552 Sigma-54, DNA binding domain KBQ49_00790 PF00005 ABC transporter KBQ49_00810 PF00571 CBS domain KBQ49_00810 PF01380 SIS domain KBQ49_00820 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KBQ49_00850 PF00551 Formyl transferase KBQ49_00865 PF02769 AIR synthase related protein, C-terminal domain KBQ49_00865 PF00586 AIR synthase related protein, N-terminal domain KBQ49_00875 PF01594 AI-2E family transporter KBQ49_00880 PF00308 Bacterial dnaA protein KBQ49_00885 PF00483 Nucleotidyl transferase KBQ49_00890 PF01636 Phosphotransferase enzyme family KBQ49_00915 PF00486 Transcriptional regulatory protein, C terminal KBQ49_00915 PF00072 Response regulator receiver domain KBQ49_00925 PF00175 Oxidoreductase NAD-binding domain KBQ49_00925 PF00258 Flavodoxin KBQ49_00925 PF00667 FAD binding domain KBQ49_00930 PF02424 ApbE family KBQ49_00950 PF13640 2OG-Fe(II) oxygenase superfamily KBQ49_00950 PF18331 PKHD-type hydroxylase C-terminal domain KBQ49_00955 PF00593 TonB dependent receptor KBQ49_00955 PF07715 TonB-dependent Receptor Plug Domain KBQ49_00960 PF00355 Rieske [2Fe-2S] domain KBQ49_00970 PF00266 Aminotransferase class-V KBQ49_00975 PF01458 Uncharacterized protein family (UPF0051) KBQ49_00980 PF00005 ABC transporter KBQ49_00985 PF01458 Uncharacterized protein family (UPF0051) KBQ49_01000 PF01965 DJ-1/PfpI family KBQ49_01015 PF01551 Peptidase family M23 KBQ49_01015 PF08525 Opacity-associated protein A N-terminal motif KBQ49_01015 PF01476 LysM domain KBQ49_01030 PF02566 OsmC-like protein KBQ49_01040 PF02567 Phenazine biosynthesis-like protein KBQ49_01045 PF01842 ACT domain KBQ49_01045 PF00696 Amino acid kinase family KBQ49_01060 PF08245 Mur ligase middle domain KBQ49_01070 PF00348 Polyprenyl synthetase KBQ49_01075 PF00436 Single-strand binding protein family KBQ49_01080 PF07804 HipA-like C-terminal domain KBQ49_01080 PF13657 HipA N-terminal domain KBQ49_01095 PF00854 POT family KBQ49_01100 PF03169 OPT oligopeptide transporter protein KBQ49_01105 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region KBQ49_01105 PF07676 WD40-like Beta Propeller Repeat KBQ49_01105 PF00326 Prolyl oligopeptidase family KBQ49_01125 PF13419 Haloacid dehalogenase-like hydrolase KBQ49_01130 PF04328 Selenoprotein, putative KBQ49_01135 PF13722 5TM C-terminal transporter carbon starvation CstA KBQ49_01135 PF02554 Carbon starvation protein CstA KBQ49_01150 PF04493 Endonuclease V KBQ49_01155 PF00300 Histidine phosphatase superfamily (branch 1) KBQ49_01165 PF07944 Beta-L-arabinofuranosidase, GH127 KBQ49_01190 PF01339 CheB methylesterase KBQ49_01190 PF00072 Response regulator receiver domain KBQ49_01195 PF01739 CheR methyltransferase, SAM binding domain KBQ49_01195 PF03705 CheR methyltransferase, all-alpha domain KBQ49_01200 PF03707 Bacterial signalling protein N terminal repeat KBQ49_01200 PF00563 EAL domain KBQ49_01200 PF00990 Diguanylate cyclase, GGDEF domain KBQ49_01205 PF01584 CheW-like domain KBQ49_01210 PF12729 Four helix bundle sensory module for signal transduction KBQ49_01210 PF00672 HAMP domain KBQ49_01210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KBQ49_01215 PF02203 Tar ligand binding domain homologue KBQ49_01215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KBQ49_01215 PF00672 HAMP domain KBQ49_01220 PF00672 HAMP domain KBQ49_01220 PF02203 Tar ligand binding domain homologue KBQ49_01220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KBQ49_01225 PF09078 CheY binding KBQ49_01225 PF02895 Signal transducing histidine kinase, homodimeric domain KBQ49_01225 PF01627 Hpt domain KBQ49_01225 PF01584 CheW-like domain KBQ49_01225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KBQ49_01250 PF09234 Domain of unknown function (DUF1963) KBQ49_01255 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ KBQ49_01265 PF00512 His Kinase A (phospho-acceptor) domain KBQ49_01265 PF00672 HAMP domain KBQ49_01265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KBQ49_01305 PF01475 Ferric uptake regulator family KBQ49_01310 PF07690 Major Facilitator Superfamily KBQ49_01325 PF00561 alpha/beta hydrolase fold KBQ49_01335 PF12804 MobA-like NTP transferase domain KBQ49_01340 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase KBQ49_01340 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain KBQ49_01345 PF00941 FAD binding domain in molybdopterin dehydrogenase KBQ49_01345 PF03450 CO dehydrogenase flavoprotein C-terminal domain KBQ49_01350 PF10518 TAT (twin-arginine translocation) pathway signal sequence KBQ49_01350 PF01799 [2Fe-2S] binding domain KBQ49_01350 PF00111 2Fe-2S iron-sulfur cluster binding domain KBQ49_01365 PF00593 TonB dependent receptor KBQ49_01365 PF07715 TonB-dependent Receptor Plug Domain KBQ49_01380 PF08240 Alcohol dehydrogenase GroES-like domain KBQ49_01380 PF00107 Zinc-binding dehydrogenase KBQ49_01385 PF00654 Voltage gated chloride channel KBQ49_01395 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KBQ49_01395 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KBQ49_01400 PF02805 Metal binding domain of Ada KBQ49_01400 PF06029 AlkA N-terminal domain KBQ49_01400 PF00730 HhH-GPD superfamily base excision DNA repair protein KBQ49_01400 PF12833 Helix-turn-helix domain KBQ49_01445 PF03880 DbpA RNA binding domain KBQ49_01445 PF00270 DEAD/DEAH box helicase KBQ49_01445 PF00271 Helicase conserved C-terminal domain KBQ49_01450 PF01479 S4 domain KBQ49_01450 PF00849 RNA pseudouridylate synthase KBQ49_01455 PF00990 Diguanylate cyclase, GGDEF domain KBQ49_01465 PF03812 2-keto-3-deoxygluconate permease KBQ49_01475 PF03737 Aldolase/RraA KBQ49_01480 PF00144 Beta-lactamase KBQ49_01495 PF00664 ABC transporter transmembrane region KBQ49_01495 PF00005 ABC transporter KBQ49_01515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KBQ49_01515 PF03466 LysR substrate binding domain KBQ49_01555 PF03653 Uncharacterised protein family (UPF0093) KBQ49_01565 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit KBQ49_01570 PF02811 PHP domain KBQ49_01570 PF14579 Helix-hairpin-helix motif KBQ49_01570 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KBQ49_01570 PF07733 Bacterial DNA polymerase III alpha NTPase domain KBQ49_01570 PF01336 OB-fold nucleic acid binding domain KBQ49_01575 PF01351 Ribonuclease HII KBQ49_01580 PF02684 Lipid-A-disaccharide synthetase KBQ49_01585 PF00132 Bacterial transferase hexapeptide (six repeats) KBQ49_01585 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 KBQ49_01590 PF07977 FabA-like domain KBQ49_01595 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD KBQ49_01595 PF00132 Bacterial transferase hexapeptide (six repeats) KBQ49_01600 PF01103 Surface antigen KBQ49_01600 PF07244 Surface antigen variable number repeat KBQ49_01605 PF17820 PDZ domain KBQ49_01605 PF02163 Peptidase family M50 KBQ49_01610 PF13288 DXP reductoisomerase C-terminal domain KBQ49_01610 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KBQ49_01610 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KBQ49_01620 PF01255 Putative undecaprenyl diphosphate synthase KBQ49_01625 PF01765 Ribosome recycling factor KBQ49_01630 PF00696 Amino acid kinase family KBQ49_01635 PF00990 Diguanylate cyclase, GGDEF domain KBQ49_01640 PF00889 Elongation factor TS KBQ49_01645 PF00318 Ribosomal protein S2 KBQ49_01680 PF00557 Metallopeptidase family M24 KBQ49_01685 PF01966 HD domain KBQ49_01685 PF08335 GlnD PII-uridylyltransferase KBQ49_01685 PF01909 Nucleotidyltransferase domain KBQ49_01690 PF00132 Bacterial transferase hexapeptide (six repeats) KBQ49_01690 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal KBQ49_01690 PF14602 Hexapeptide repeat of succinyl-transferase KBQ49_01695 PF03960 ArsC family KBQ49_01700 PF07687 Peptidase dimerisation domain KBQ49_01700 PF01546 Peptidase family M20/M25/M40 KBQ49_01710 PF00733 Asparagine synthase KBQ49_01710 PF13537 Glutamine amidotransferase domain KBQ49_01725 PF00210 Ferritin-like domain KBQ49_01730 PF03989 DNA gyrase C-terminal domain, beta-propeller KBQ49_01730 PF00521 DNA gyrase/topoisomerase IV, subunit A KBQ49_01740 PF02321 Outer membrane efflux protein KBQ49_01745 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KBQ49_01745 PF00529 HlyD membrane-fusion protein of T1SS KBQ49_01750 PF07690 Major Facilitator Superfamily KBQ49_01775 PF06903 VirK protein KBQ49_01785 PF00773 RNB domain KBQ49_01785 PF00575 S1 RNA binding domain KBQ49_01785 PF08206 Ribonuclease B OB domain KBQ49_01785 PF08461 Ribonuclease R winged-helix domain KBQ49_01785 PF17876 Cold shock domain KBQ49_01795 PF08032 RNA 2'-O ribose methyltransferase substrate binding KBQ49_01795 PF00588 SpoU rRNA Methylase family KBQ49_01805 PF00929 Exonuclease KBQ49_01815 PF05114 Protein of unknown function (DUF692) KBQ49_01825 PF01895 PhoU domain KBQ49_01830 PF00005 ABC transporter KBQ49_01835 PF00528 Binding-protein-dependent transport system inner membrane component KBQ49_01840 PF00528 Binding-protein-dependent transport system inner membrane component KBQ49_01845 PF12849 PBP superfamily domain KBQ49_01850 PF12849 PBP superfamily domain KBQ49_01855 PF07396 Phosphate-selective porin O and P KBQ49_01865 PF00484 Carbonic anhydrase KBQ49_01875 PF10576 Iron-sulfur binding domain of endonuclease III KBQ49_01875 PF00633 Helix-hairpin-helix motif KBQ49_01875 PF00730 HhH-GPD superfamily base excision DNA repair protein KBQ49_01885 PF00378 Enoyl-CoA hydratase/isomerase KBQ49_01890 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KBQ49_01890 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KBQ49_01895 PF00293 NUDIX domain KBQ49_01900 PF00581 Rhodanese-like domain KBQ49_01940 PF01170 Putative RNA methylase family UPF0020 KBQ49_01940 PF10672 S-adenosylmethionine-dependent methyltransferase KBQ49_01940 PF02926 THUMP domain KBQ49_01945 PF00072 Response regulator receiver domain KBQ49_01950 PF00512 His Kinase A (phospho-acceptor) domain KBQ49_01950 PF00672 HAMP domain KBQ49_01950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KBQ49_01950 PF01627 Hpt domain KBQ49_01950 PF00072 Response regulator receiver domain KBQ49_01950 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KBQ49_01955 PF04286 Protein of unknown function (DUF445) KBQ49_01970 PF00171 Aldehyde dehydrogenase family KBQ49_01975 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KBQ49_01975 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KBQ49_01980 PF00202 Aminotransferase class-III KBQ49_01985 PF07883 Cupin domain KBQ49_01985 PF01381 Helix-turn-helix KBQ49_01990 PF00171 Aldehyde dehydrogenase family KBQ49_02005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KBQ49_02005 PF03459 TOBE domain KBQ49_02010 PF07690 Major Facilitator Superfamily KBQ49_02015 PF02634 FdhD/NarQ family KBQ49_02020 PF00384 Molybdopterin oxidoreductase KBQ49_02040 PF00818 Ice nucleation protein repeat KBQ49_02045 PF07690 Major Facilitator Superfamily KBQ49_02045 PF00083 Sugar (and other) transporter KBQ49_02050 PF00990 Diguanylate cyclase, GGDEF domain KBQ49_02050 PF17151 Periplasmic sensor domain KBQ49_02055 PF01266 FAD dependent oxidoreductase KBQ49_02060 PF00120 Glutamine synthetase, catalytic domain KBQ49_02065 PF07722 Peptidase C26 KBQ49_02070 PF00120 Glutamine synthetase, catalytic domain KBQ49_02075 PF00202 Aminotransferase class-III KBQ49_02080 PF13416 Bacterial extracellular solute-binding protein KBQ49_02085 PF13416 Bacterial extracellular solute-binding protein KBQ49_02090 PF13533 Biotin-lipoyl like KBQ49_02095 PF07690 Major Facilitator Superfamily KBQ49_02100 PF02321 Outer membrane efflux protein KBQ49_02105 PF08402 TOBE domain KBQ49_02105 PF00005 ABC transporter KBQ49_02110 PF00528 Binding-protein-dependent transport system inner membrane component KBQ49_02115 PF00528 Binding-protein-dependent transport system inner membrane component KBQ49_02120 PF00171 Aldehyde dehydrogenase family KBQ49_02135 PF00571 CBS domain KBQ49_02135 PF03471 Transporter associated domain KBQ49_02145 PF02130 Uncharacterized protein family UPF0054 KBQ49_02150 PF02562 PhoH-like protein KBQ49_02155 PF00919 Uncharacterized protein family UPF0004 KBQ49_02155 PF04055 Radical SAM superfamily KBQ49_02155 PF01938 TRAM domain KBQ49_02160 PF00043 Glutathione S-transferase, C-terminal domain KBQ49_02160 PF02798 Glutathione S-transferase, N-terminal domain KBQ49_02165 PF01464 Transglycosylase SLT domain KBQ49_02170 PF00355 Rieske [2Fe-2S] domain KBQ49_02170 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal KBQ49_02175 PF00032 Cytochrome b(C-terminal)/b6/petD KBQ49_02175 PF00033 Cytochrome b/b6/petB KBQ49_02185 PF02167 Cytochrome C1 family KBQ49_02190 PF00043 Glutathione S-transferase, C-terminal domain KBQ49_02190 PF02798 Glutathione S-transferase, N-terminal domain KBQ49_02195 PF04386 Stringent starvation protein B KBQ49_02210 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain KBQ49_02210 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain KBQ49_02220 PF00731 AIR carboxylase KBQ49_02225 PF02222 ATP-grasp domain KBQ49_02225 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain KBQ49_02230 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KBQ49_02230 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KBQ49_02235 PF00462 Glutaredoxin KBQ49_02240 PF00106 short chain dehydrogenase KBQ49_02245 PF01914 MarC family integral membrane protein KBQ49_02250 PF00593 TonB dependent receptor KBQ49_02255 PF11892 Domain of unknown function (DUF3412) KBQ49_02255 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases KBQ49_02255 PF03641 Possible lysine decarboxylase KBQ49_02260 PF07694 5TMR of 5TMR-LYT KBQ49_02260 PF06580 Histidine kinase KBQ49_02265 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor KBQ49_02265 PF07963 Prokaryotic N-terminal methylation motif KBQ49_02285 PF05567 Neisseria PilC beta-propeller domain KBQ49_02290 PF07963 Prokaryotic N-terminal methylation motif KBQ49_02290 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor KBQ49_02305 PF02151 UvrB/uvrC motif KBQ49_02305 PF12344 Ultra-violet resistance protein B KBQ49_02305 PF17757 UvrB interaction domain KBQ49_02305 PF00271 Helicase conserved C-terminal domain KBQ49_02305 PF04851 Type III restriction enzyme, res subunit KBQ49_02385 PF00589 Phage integrase family KBQ49_02405 PF04335 VirB8 protein KBQ49_02415 PF03743 Bacterial conjugation TrbI-like protein KBQ49_02420 PF00437 Type II/IV secretion system protein KBQ49_02425 PF01464 Transglycosylase SLT domain KBQ49_02435 PF05101 Type IV secretory pathway, VirB3-like protein KBQ49_02440 PF03135 CagE, TrbE, VirB family, component of type IV transporter system KBQ49_02525 PF02824 TGS domain KBQ49_02525 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KBQ49_02525 PF03129 Anticodon binding domain KBQ49_02525 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KBQ49_02530 PF00707 Translation initiation factor IF-3, C-terminal domain KBQ49_02530 PF05198 Translation initiation factor IF-3, N-terminal domain KBQ49_02535 PF01632 Ribosomal protein L35 KBQ49_02540 PF00453 Ribosomal protein L20 KBQ49_02545 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KBQ49_02545 PF01409 tRNA synthetases class II core domain (F) KBQ49_02550 PF03483 B3/4 domain KBQ49_02550 PF03484 tRNA synthetase B5 domain KBQ49_02550 PF03147 Ferredoxin-fold anticodon binding domain KBQ49_02550 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KBQ49_02550 PF01588 Putative tRNA binding domain KBQ49_02555 PF00216 Bacterial DNA-binding protein KBQ49_02560 PF13411 MerR HTH family regulatory protein KBQ49_02580 PF02397 Bacterial sugar transferase KBQ49_02595 PF13439 Glycosyltransferase Family 4 KBQ49_02595 PF00534 Glycosyl transferases group 1 KBQ49_02605 PF14667 Polysaccharide biosynthesis C-terminal domain KBQ49_02620 PF03808 Glycosyl transferase WecB/TagA/CpsF family KBQ49_02630 PF13292 1-deoxy-D-xylulose-5-phosphate synthase KBQ49_02630 PF02779 Transketolase, pyrimidine binding domain KBQ49_02630 PF02780 Transketolase, C-terminal domain KBQ49_02640 PF12806 Acetyl-CoA dehydrogenase C-terminal like KBQ49_02640 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KBQ49_02640 PF02770 Acyl-CoA dehydrogenase, middle domain KBQ49_02640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KBQ49_02675 PF02601 Exonuclease VII, large subunit KBQ49_02675 PF13742 OB-fold nucleic acid binding domain KBQ49_02680 PF08331 Domain of unknown function (DUF1730) KBQ49_02685 PF01256 Carbohydrate kinase KBQ49_02685 PF03853 YjeF-related protein N-terminus KBQ49_02690 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE KBQ49_02695 PF11741 AMIN domain KBQ49_02695 PF01520 N-acetylmuramoyl-L-alanine amidase KBQ49_02700 PF01119 DNA mismatch repair protein, C-terminal domain KBQ49_02700 PF08676 MutL C terminal dimerisation domain KBQ49_02715 PF07879 PHB/PHA accumulation regulator DNA-binding domain KBQ49_02715 PF05233 PHB accumulation regulatory domain KBQ49_02720 PF00106 short chain dehydrogenase KBQ49_02730 PF01435 Peptidase family M48 KBQ49_02735 PF00563 EAL domain KBQ49_02735 PF00990 Diguanylate cyclase, GGDEF domain KBQ49_02735 PF00072 Response regulator receiver domain KBQ49_02745 PF07152 YaeQ protein KBQ49_02750 PF00849 RNA pseudouridylate synthase KBQ49_02755 PF00313 'Cold-shock' DNA-binding domain KBQ49_02760 PF00043 Glutathione S-transferase, C-terminal domain KBQ49_02760 PF02798 Glutathione S-transferase, N-terminal domain KBQ49_02765 PF07859 alpha/beta hydrolase fold KBQ49_02770 PF02696 Uncharacterized ACR, YdiU/UPF0061 family KBQ49_02780 PF00529 HlyD membrane-fusion protein of T1SS KBQ49_02780 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KBQ49_02785 PF00873 AcrB/AcrD/AcrF family KBQ49_02790 PF00156 Phosphoribosyl transferase domain KBQ49_02795 PF00270 DEAD/DEAH box helicase KBQ49_02795 PF03880 DbpA RNA binding domain KBQ49_02795 PF00271 Helicase conserved C-terminal domain KBQ49_02800 PF00005 ABC transporter KBQ49_02800 PF16326 ABC transporter C-terminal domain KBQ49_02800 PF12848 ABC transporter KBQ49_02815 PF00545 ribonuclease KBQ49_02820 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KBQ49_02820 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KBQ49_02830 PF14310 Fibronectin type III-like domain KBQ49_02830 PF00933 Glycosyl hydrolase family 3 N terminal domain KBQ49_02830 PF01915 Glycosyl hydrolase family 3 C-terminal domain KBQ49_02840 PF00854 POT family KBQ49_02870 PF01047 MarR family KBQ49_02885 PF00255 Glutathione peroxidase KBQ49_02890 PF00175 Oxidoreductase NAD-binding domain KBQ49_02890 PF00970 Oxidoreductase FAD-binding domain KBQ49_02900 PF00005 ABC transporter KBQ49_02920 PF05681 Fumarate hydratase (Fumerase) KBQ49_02920 PF05683 Fumarase C-terminus KBQ49_02935 PF02253 Phospholipase A1 KBQ49_02945 PF00313 'Cold-shock' DNA-binding domain KBQ49_02960 PF00899 ThiF family KBQ49_02965 PF01026 TatD related DNase KBQ49_02980 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KBQ49_02980 PF02770 Acyl-CoA dehydrogenase, middle domain KBQ49_02980 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KBQ49_02985 PF03358 NADPH-dependent FMN reductase KBQ49_02990 PF03796 DnaB-like helicase C terminal domain KBQ49_02990 PF00772 DnaB-like helicase N terminal domain KBQ49_02995 PF03441 FAD binding domain of DNA photolyase KBQ49_02995 PF00875 DNA photolyase KBQ49_03000 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain KBQ49_03000 PF06974 Protein of unknown function (DUF1298) KBQ49_03005 PF00691 OmpA family KBQ49_03005 PF05736 OprF membrane domain KBQ49_03010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KBQ49_03010 PF03466 LysR substrate binding domain KBQ49_03025 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KBQ49_03025 PF00529 HlyD membrane-fusion protein of T1SS KBQ49_03030 PF00873 AcrB/AcrD/AcrF family KBQ49_03035 PF00106 short chain dehydrogenase KBQ49_03040 PF02321 Outer membrane efflux protein KBQ49_03060 PF00082 Subtilase family KBQ49_03065 PF01668 SmpB protein KBQ49_03070 PF03364 Polyketide cyclase / dehydrase and lipid transport KBQ49_03075 PF03658 RnfH family Ubiquitin KBQ49_03080 PF04355 SmpA / OmlA family KBQ49_03085 PF01475 Ferric uptake regulator family KBQ49_03090 PF02463 RecF/RecN/SMC N terminal domain KBQ49_03095 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding KBQ49_03095 PF01628 HrcA protein C terminal domain KBQ49_03100 PF01025 GrpE KBQ49_03105 PF00012 Hsp70 protein KBQ49_03110 PF00684 DnaJ central domain KBQ49_03110 PF00226 DnaJ domain KBQ49_03110 PF01556 DnaJ C terminal domain KBQ49_03115 PF08543 Phosphomethylpyrimidine kinase KBQ49_03120 PF01817 Chorismate mutase type II KBQ49_03120 PF02153 Prephenate dehydrogenase KBQ49_03130 PF00005 ABC transporter KBQ49_03130 PF00664 ABC transporter transmembrane region KBQ49_03135 PF01205 Uncharacterized protein family UPF0029 KBQ49_03145 PF04542 Sigma-70 region 2 KBQ49_03145 PF08281 Sigma-70, region 4 KBQ49_03155 PF00990 Diguanylate cyclase, GGDEF domain KBQ49_03155 PF03707 Bacterial signalling protein N terminal repeat KBQ49_03155 PF00563 EAL domain KBQ49_03160 PF03641 Possible lysine decarboxylase KBQ49_03170 PF07992 Pyridine nucleotide-disulphide oxidoreductase KBQ49_03170 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KBQ49_03175 PF02817 e3 binding domain KBQ49_03175 PF00364 Biotin-requiring enzyme KBQ49_03175 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KBQ49_03180 PF16870 2-oxoglutarate dehydrogenase C-terminal KBQ49_03180 PF02779 Transketolase, pyrimidine binding domain KBQ49_03180 PF16078 2-oxoglutarate dehydrogenase N-terminus KBQ49_03180 PF00676 Dehydrogenase E1 component KBQ49_03190 PF08007 Cupin superfamily protein KBQ49_03205 PF08328 Adenylosuccinate lyase C-terminal KBQ49_03205 PF00206 Lyase KBQ49_03215 PF10415 Fumarase C C-terminus KBQ49_03215 PF00206 Lyase KBQ49_03245 PF00005 ABC transporter KBQ49_03250 PF00392 Bacterial regulatory proteins, gntR family KBQ49_03260 PF00255 Glutathione peroxidase KBQ49_03265 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KBQ49_03265 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KBQ49_03270 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KBQ49_03270 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KBQ49_03270 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KBQ49_03275 PF04102 SlyX KBQ49_03285 PF01757 Acyltransferase family KBQ49_03295 PF02607 B12 binding domain KBQ49_03295 PF02965 Vitamin B12 dependent methionine synthase, activation domain KBQ49_03295 PF02574 Homocysteine S-methyltransferase KBQ49_03295 PF02310 B12 binding domain KBQ49_03295 PF00809 Pterin binding enzyme KBQ49_03300 PF00809 Pterin binding enzyme KBQ49_03300 PF02574 Homocysteine S-methyltransferase KBQ49_03305 PF01209 ubiE/COQ5 methyltransferase family KBQ49_03310 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KBQ49_03310 PF02770 Acyl-CoA dehydrogenase, middle domain KBQ49_03310 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KBQ49_03355 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KBQ49_03355 PF00529 HlyD membrane-fusion protein of T1SS KBQ49_03365 PF05088 Bacterial NAD-glutamate dehydrogenase KBQ49_03375 PF03377 TAL effector repeat KBQ49_03390 PF01513 ATP-NAD kinase KBQ49_03415 PF00929 Exonuclease KBQ49_03415 PF08411 Exonuclease C-terminal KBQ49_03420 PF01494 FAD binding domain KBQ49_03425 PF00266 Aminotransferase class-V KBQ49_03435 PF06052 3-hydroxyanthranilic acid dioxygenase KBQ49_03440 PF00484 Carbonic anhydrase KBQ49_03485 PF00196 Bacterial regulatory proteins, luxR family KBQ49_03485 PF00072 Response regulator receiver domain KBQ49_03505 PF01336 OB-fold nucleic acid binding domain KBQ49_03505 PF00152 tRNA synthetases class II (D, K and N) KBQ49_03510 PF01521 Iron-sulphur cluster biosynthesis KBQ49_03520 PF01250 Ribosomal protein S6 KBQ49_03525 PF01084 Ribosomal protein S18 KBQ49_03530 PF03948 Ribosomal protein L9, C-terminal domain KBQ49_03530 PF01281 Ribosomal protein L9, N-terminal domain KBQ49_03535 PF02463 RecF/RecN/SMC N terminal domain KBQ49_03540 PF04354 ZipA, C-terminal FtsZ-binding domain KBQ49_03545 PF00155 Aminotransferase class I and II KBQ49_03550 PF00533 BRCA1 C Terminus (BRCT) domain KBQ49_03550 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KBQ49_03550 PF12826 Helix-hairpin-helix motif KBQ49_03550 PF03120 NAD-dependent DNA ligase OB-fold domain KBQ49_03550 PF01653 NAD-dependent DNA ligase adenylation domain KBQ49_03555 PF00152 tRNA synthetases class II (D, K and N) KBQ49_03565 PF01008 Initiation factor 2 subunit family KBQ49_03570 PF03989 DNA gyrase C-terminal domain, beta-propeller KBQ49_03570 PF00521 DNA gyrase/topoisomerase IV, subunit A KBQ49_03600 PF01175 Urocanase Rossmann-like domain KBQ49_03600 PF17392 Urocanase C-terminal domain KBQ49_03600 PF17391 Urocanase N-terminal domain KBQ49_03610 PF00221 Aromatic amino acid lyase KBQ49_03615 PF07969 Amidohydrolase family KBQ49_03630 PF00106 short chain dehydrogenase KBQ49_03665 PF01794 Ferric reductase like transmembrane component KBQ49_03670 PF00174 Oxidoreductase molybdopterin binding domain KBQ49_03675 PF00266 Aminotransferase class-V KBQ49_03680 PF01817 Chorismate mutase type II KBQ49_03680 PF00800 Prephenate dehydratase KBQ49_03680 PF01842 ACT domain KBQ49_03685 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KBQ49_03695 PF03544 Gram-negative bacterial TonB protein C-terminal KBQ49_03700 PF02403 Seryl-tRNA synthetase N-terminal domain KBQ49_03700 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KBQ49_03705 PF03466 LysR substrate binding domain KBQ49_03705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KBQ49_03745 PF12704 MacB-like periplasmic core domain KBQ49_03745 PF02687 FtsX-like permease family KBQ49_03745 PF00005 ABC transporter KBQ49_03760 PF00512 His Kinase A (phospho-acceptor) domain KBQ49_03760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KBQ49_03765 PF00072 Response regulator receiver domain KBQ49_03765 PF00486 Transcriptional regulatory protein, C terminal KBQ49_03775 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KBQ49_03780 PF00294 pfkB family carbohydrate kinase KBQ49_03785 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KBQ49_03785 PF00381 PTS HPr component phosphorylation site KBQ49_03785 PF02896 PEP-utilising enzyme, TIM barrel domain KBQ49_03785 PF00391 PEP-utilising enzyme, mobile domain KBQ49_03785 PF05524 PEP-utilising enzyme, N-terminal KBQ49_03790 PF00356 Bacterial regulatory proteins, lacI family KBQ49_03800 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KBQ49_03800 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KBQ49_03800 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KBQ49_03810 PF00563 EAL domain KBQ49_03810 PF00990 Diguanylate cyclase, GGDEF domain KBQ49_03810 PF03707 Bacterial signalling protein N terminal repeat KBQ49_03820 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KBQ49_03830 PF00581 Rhodanese-like domain KBQ49_03830 PF17773 UPF0176 acylphosphatase like domain KBQ49_03840 PF00296 Luciferase-like monooxygenase KBQ49_03855 PF00571 CBS domain KBQ49_03855 PF03471 Transporter associated domain KBQ49_03855 PF01595 Cyclin M transmembrane N-terminal domain KBQ49_03865 PF01384 Phosphate transporter family KBQ49_03880 PF00204 DNA gyrase B KBQ49_03880 PF00986 DNA gyrase B subunit, carboxyl terminus KBQ49_03880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KBQ49_03880 PF01751 Toprim domain KBQ49_03890 PF06418 CTP synthase N-terminus KBQ49_03890 PF00117 Glutamine amidotransferase class-I KBQ49_03895 PF00793 DAHP synthetase I family KBQ49_03900 PF03952 Enolase, N-terminal domain KBQ49_03900 PF00113 Enolase, C-terminal TIM barrel domain KBQ49_03905 PF04977 Septum formation initiator KBQ49_03910 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KBQ49_03915 PF02542 YgbB family KBQ49_03920 PF01142 tRNA pseudouridine synthase D (TruD) KBQ49_03925 PF01713 Smr domain KBQ49_03930 PF01975 Survival protein SurE KBQ49_03940 PF09335 SNARE associated Golgi protein KBQ49_03945 PF01551 Peptidase family M23 KBQ49_03945 PF01476 LysM domain KBQ49_03955 PF01985 CRS1 / YhbY (CRM) domain KBQ49_03960 PF01728 FtsJ-like methyltransferase KBQ49_03965 PF17862 AAA+ lid domain KBQ49_03965 PF06480 FtsH Extracellular KBQ49_03965 PF01434 Peptidase family M41 KBQ49_03965 PF00004 ATPase family associated with various cellular activities (AAA) KBQ49_03975 PF00809 Pterin binding enzyme KBQ49_03985 PF17209 Hfq protein KBQ49_03990 PF13167 GTP-binding GTPase N-terminal KBQ49_03990 PF01926 50S ribosome-binding GTPase KBQ49_03990 PF16360 GTP-binding GTPase Middle Region KBQ49_03995 PF02464 Competence-damaged protein KBQ49_04000 PF03109 ABC1 family KBQ49_04005 PF01726 LexA DNA binding domain KBQ49_04005 PF00717 Peptidase S24-like KBQ49_04010 PF00154 recA bacterial DNA recombination protein KBQ49_04015 PF02631 RecX family KBQ49_04025 PF02599 Global regulator protein family KBQ49_04075 PF02322 Cytochrome bd terminal oxidase subunit II KBQ49_04080 PF01654 Cytochrome bd terminal oxidase subunit I KBQ49_04085 PF00664 ABC transporter transmembrane region KBQ49_04085 PF00005 ABC transporter KBQ49_04090 PF00005 ABC transporter KBQ49_04090 PF00664 ABC transporter transmembrane region KBQ49_04095 PF00561 alpha/beta hydrolase fold KBQ49_04110 PF03918 Cytochrome C biogenesis protein KBQ49_04115 PF08534 Redoxin KBQ49_04120 PF01578 Cytochrome C assembly protein KBQ49_04120 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal KBQ49_04125 PF03100 CcmE KBQ49_04135 PF01578 Cytochrome C assembly protein KBQ49_04140 PF03379 CcmB protein KBQ49_04145 PF00005 ABC transporter KBQ49_04150 PF00155 Aminotransferase class I and II KBQ49_04155 PF00795 Carbon-nitrogen hydrolase KBQ49_04175 PF00849 RNA pseudouridylate synthase KBQ49_04175 PF01479 S4 domain KBQ49_04180 PF04079 Segregation and condensation complex subunit ScpB KBQ49_04185 PF02616 Segregation and condensation protein ScpA KBQ49_04190 PF03795 YCII-related domain KBQ49_04200 PF00356 Bacterial regulatory proteins, lacI family KBQ49_04220 PF00528 Binding-protein-dependent transport system inner membrane component KBQ49_04225 PF00528 Binding-protein-dependent transport system inner membrane component KBQ49_04235 PF01081 KDPG and KHG aldolase KBQ49_04240 PF00920 Dehydratase family KBQ49_04245 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase KBQ49_04250 PF02685 Glucokinase KBQ49_04255 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain KBQ49_04255 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain KBQ49_04260 PF00005 ABC transporter KBQ49_04260 PF17912 MalK OB fold domain KBQ49_04265 PF01571 Aminomethyltransferase folate-binding domain KBQ49_04275 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KBQ49_04280 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KBQ49_04285 PF00890 FAD binding domain KBQ49_04285 PF02910 Fumarate reductase flavoprotein C-term KBQ49_04290 PF13085 2Fe-2S iron-sulfur cluster binding domain KBQ49_04290 PF13237 4Fe-4S dicluster domain KBQ49_04295 PF03937 Flavinator of succinate dehydrogenase KBQ49_04305 PF12704 MacB-like periplasmic core domain KBQ49_04305 PF02687 FtsX-like permease family KBQ49_04310 PF00005 ABC transporter KBQ49_04320 PF03772 Competence protein KBQ49_04320 PF00753 Metallo-beta-lactamase superfamily KBQ49_04325 PF01618 MotA/TolQ/ExbB proton channel family KBQ49_04335 PF00664 ABC transporter transmembrane region KBQ49_04335 PF00005 ABC transporter KBQ49_04340 PF02606 Tetraacyldisaccharide-1-P 4'-kinase KBQ49_04345 PF02348 Cytidylyltransferase KBQ49_04350 PF01451 Low molecular weight phosphotyrosine protein phosphatase KBQ49_04360 PF01541 GIY-YIG catalytic domain KBQ49_04360 PF02151 UvrB/uvrC motif KBQ49_04360 PF08459 UvrC Helix-hairpin-helix N-terminal KBQ49_04365 PF01066 CDP-alcohol phosphatidyltransferase KBQ49_04375 PF13356 Arm DNA-binding domain KBQ49_04375 PF00589 Phage integrase family KBQ49_04380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KBQ49_04380 PF03466 LysR substrate binding domain KBQ49_04585 PF00069 Protein kinase domain KBQ49_04585 PF03793 PASTA domain KBQ49_04595 PF02463 RecF/RecN/SMC N terminal domain KBQ49_04720 PF00145 C-5 cytosine-specific DNA methylase KBQ49_04725 PF01131 DNA topoisomerase KBQ49_04725 PF01751 Toprim domain KBQ49_04730 PF00436 Single-strand binding protein family KBQ49_04765 PF13614 AAA domain KBQ49_04775 PF12833 Helix-turn-helix domain KBQ49_04775 PF02311 AraC-like ligand binding domain KBQ49_04780 PF01494 FAD binding domain KBQ49_04830 PF00202 Aminotransferase class-III KBQ49_04835 PF00109 Beta-ketoacyl synthase, N-terminal domain KBQ49_04835 PF02801 Beta-ketoacyl synthase, C-terminal domain KBQ49_04840 PF00550 Phosphopantetheine attachment site KBQ49_04865 PF00155 Aminotransferase class I and II KBQ49_04870 PF03475 3-alpha domain KBQ49_04870 PF03473 MOSC domain KBQ49_04875 PF05173 Dihydrodipicolinate reductase, C-terminus KBQ49_04875 PF01113 Dihydrodipicolinate reductase, N-terminus KBQ49_04880 PF00117 Glutamine amidotransferase class-I KBQ49_04880 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KBQ49_04890 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KBQ49_04890 PF02142 MGS-like domain KBQ49_04890 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KBQ49_04895 PF01272 Transcription elongation factor, GreA/GreB, C-term KBQ49_04895 PF03449 Transcription elongation factor, N-terminal KBQ49_04905 PF01368 DHH family KBQ49_04905 PF02272 DHHA1 domain KBQ49_04905 PF17768 RecJ OB domain KBQ49_04990 PF18456 Diiron non-heme beta-hydroxylase N-terminal domain KBQ49_04990 PF12706 Beta-lactamase superfamily domain KBQ49_05000 PF03621 MbtH-like protein KBQ49_05005 PF00005 ABC transporter KBQ49_05005 PF00664 ABC transporter transmembrane region KBQ49_05010 PF00378 Enoyl-CoA hydratase/isomerase KBQ49_05015 PF00155 Aminotransferase class I and II KBQ49_05020 PF00378 Enoyl-CoA hydratase/isomerase KBQ49_05030 PF02797 Chalcone and stilbene synthases, C-terminal domain KBQ49_05030 PF00195 Chalcone and stilbene synthases, N-terminal domain KBQ49_05035 PF13193 AMP-binding enzyme C-terminal domain KBQ49_05035 PF00550 Phosphopantetheine attachment site KBQ49_05035 PF00501 AMP-binding enzyme KBQ49_05035 PF00668 Condensation domain KBQ49_05040 PF00501 AMP-binding enzyme KBQ49_05040 PF13193 AMP-binding enzyme C-terminal domain KBQ49_05040 PF00668 Condensation domain KBQ49_05040 PF00550 Phosphopantetheine attachment site KBQ49_05040 PF00975 Thioesterase domain KBQ49_05045 PF00975 Thioesterase domain KBQ49_05045 PF00550 Phosphopantetheine attachment site KBQ49_05045 PF00668 Condensation domain KBQ49_05045 PF13193 AMP-binding enzyme C-terminal domain KBQ49_05045 PF00501 AMP-binding enzyme KBQ49_05050 PF00550 Phosphopantetheine attachment site KBQ49_05050 PF00668 Condensation domain KBQ49_05050 PF00501 AMP-binding enzyme KBQ49_05050 PF13193 AMP-binding enzyme C-terminal domain KBQ49_05060 PF00501 AMP-binding enzyme KBQ49_05060 PF13193 AMP-binding enzyme C-terminal domain KBQ49_05060 PF00668 Condensation domain KBQ49_05060 PF00550 Phosphopantetheine attachment site KBQ49_05060 PF00975 Thioesterase domain KBQ49_05065 PF00501 AMP-binding enzyme KBQ49_05065 PF00550 Phosphopantetheine attachment site KBQ49_05065 PF00975 Thioesterase domain KBQ49_05065 PF13193 AMP-binding enzyme C-terminal domain KBQ49_05065 PF00668 Condensation domain KBQ49_05085 PF00155 Aminotransferase class I and II KBQ49_05090 PF01070 FMN-dependent dehydrogenase KBQ49_05095 PF00202 Aminotransferase class-III KBQ49_05100 PF02638 Glycosyl hydrolase-like 10 KBQ49_05170 PF00072 Response regulator receiver domain KBQ49_05170 PF09308 LuxQ, periplasmic KBQ49_05170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KBQ49_05170 PF00512 His Kinase A (phospho-acceptor) domain KBQ49_05175 PF09371 Tex-like protein N-terminal domain KBQ49_05175 PF16921 Tex protein YqgF-like domain KBQ49_05175 PF17674 HHH domain KBQ49_05175 PF00575 S1 RNA binding domain KBQ49_05180 PF13426 PAS domain KBQ49_05180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KBQ49_05180 PF00072 Response regulator receiver domain KBQ49_05190 PF05430 S-adenosyl-L-methionine-dependent methyltransferase KBQ49_05190 PF01266 FAD dependent oxidoreductase KBQ49_05210 PF00561 alpha/beta hydrolase fold KBQ49_05220 PF01066 CDP-alcohol phosphatidyltransferase KBQ49_05240 PF03618 Kinase/pyrophosphorylase KBQ49_05245 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KBQ49_05245 PF02896 PEP-utilising enzyme, TIM barrel domain KBQ49_05245 PF00391 PEP-utilising enzyme, mobile domain KBQ49_05250 PF05552 Conserved TM helix KBQ49_05250 PF00924 Mechanosensitive ion channel KBQ49_05255 PF00929 Exonuclease KBQ49_05260 PF14437 MafB19-like deaminase KBQ49_05265 PF01325 Iron dependent repressor, N-terminal DNA binding domain KBQ49_05265 PF02742 Iron dependent repressor, metal binding and dimerisation domain KBQ49_05270 PF01566 Natural resistance-associated macrophage protein KBQ49_05275 PF00072 Response regulator receiver domain KBQ49_05275 PF13188 PAS domain KBQ49_05275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KBQ49_05275 PF08448 PAS fold KBQ49_05275 PF00512 His Kinase A (phospho-acceptor) domain KBQ49_05280 PF06745 KaiC KBQ49_05290 PF13276 HTH-like domain KBQ49_05290 PF13683 Integrase core domain KBQ49_05340 PF00043 Glutathione S-transferase, C-terminal domain KBQ49_05340 PF02798 Glutathione S-transferase, N-terminal domain KBQ49_05345 PF00958 GMP synthase C terminal domain KBQ49_05345 PF02540 NAD synthase KBQ49_05345 PF00117 Glutamine amidotransferase class-I KBQ49_05350 PF00571 CBS domain KBQ49_05350 PF00478 IMP dehydrogenase / GMP reductase domain KBQ49_05355 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KBQ49_05355 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KBQ49_05370 PF00999 Sodium/hydrogen exchanger family KBQ49_05370 PF02254 TrkA-N domain KBQ49_05375 PF00899 ThiF family KBQ49_05380 PF03454 MoeA C-terminal region (domain IV) KBQ49_05380 PF03453 MoeA N-terminal region (domain I and II) KBQ49_05380 PF00994 Probable molybdopterin binding domain KBQ49_05385 PF12804 MobA-like NTP transferase domain KBQ49_05390 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KBQ49_05390 PF01926 50S ribosome-binding GTPase KBQ49_05395 PF01011 PQQ enzyme repeat KBQ49_05395 PF13360 PQQ-like domain KBQ49_05405 PF13464 Domain of unknown function (DUF4115) KBQ49_05415 PF04055 Radical SAM superfamily KBQ49_05420 PF00334 Nucleoside diphosphate kinase KBQ49_05430 PF00378 Enoyl-CoA hydratase/isomerase KBQ49_05430 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KBQ49_05430 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KBQ49_05435 PF02803 Thiolase, C-terminal domain KBQ49_05435 PF00108 Thiolase, N-terminal domain KBQ49_05440 PF00483 Nucleotidyl transferase KBQ49_05445 PF02719 Polysaccharide biosynthesis protein KBQ49_05450 PF00953 Glycosyl transferase family 4 KBQ49_05455 PF18073 Rubredoxin metal binding domain KBQ49_05465 PF00216 Bacterial DNA-binding protein KBQ49_05470 PF00575 S1 RNA binding domain KBQ49_05475 PF02224 Cytidylate kinase KBQ49_05480 PF00444 Ribosomal protein L36 KBQ49_05490 PF04371 Porphyromonas-type peptidyl-arginine deiminase KBQ49_05495 PF00795 Carbon-nitrogen hydrolase KBQ49_05505 PF00873 AcrB/AcrD/AcrF family KBQ49_05510 PF00873 AcrB/AcrD/AcrF family KBQ49_05515 PF00529 HlyD membrane-fusion protein of T1SS KBQ49_05515 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KBQ49_05520 PF00034 Cytochrome c KBQ49_05525 PF00034 Cytochrome c KBQ49_05535 PF01106 NifU-like domain KBQ49_05540 PF01329 Pterin 4 alpha carbinolamine dehydratase KBQ49_05550 PF02535 ZIP Zinc transporter KBQ49_05560 PF01479 S4 domain KBQ49_05560 PF00849 RNA pseudouridylate synthase KBQ49_05565 PF00575 S1 RNA binding domain KBQ49_05565 PF12111 Polyribonucleotide phosphorylase C terminal KBQ49_05565 PF10150 Ribonuclease E/G family KBQ49_05575 PF00196 Bacterial regulatory proteins, luxR family KBQ49_05575 PF00072 Response regulator receiver domain KBQ49_05585 PF13276 HTH-like domain KBQ49_05585 PF00665 Integrase core domain KBQ49_05585 PF13333 Integrase core domain KBQ49_05590 PF00665 Integrase core domain KBQ49_05590 PF13276 HTH-like domain KBQ49_05590 PF13333 Integrase core domain KBQ49_05595 PF01527 Transposase KBQ49_05605 PF04715 Anthranilate synthase component I, N terminal region KBQ49_05605 PF00425 chorismate binding enzyme KBQ49_05630 PF03358 NADPH-dependent FMN reductase KBQ49_05635 PF00501 AMP-binding enzyme KBQ49_05640 PF00665 Integrase core domain KBQ49_05640 PF13333 Integrase core domain KBQ49_05640 PF13276 HTH-like domain KBQ49_05650 PF01371 Trp repressor protein KBQ49_05670 PF00005 ABC transporter KBQ49_05670 PF00664 ABC transporter transmembrane region KBQ49_05690 PF00534 Glycosyl transferases group 1 KBQ49_05690 PF13579 Glycosyl transferase 4-like domain KBQ49_05695 PF13439 Glycosyltransferase Family 4 KBQ49_05695 PF00534 Glycosyl transferases group 1 KBQ49_05730 PF00535 Glycosyl transferase family 2 KBQ49_05735 PF01943 Polysaccharide biosynthesis protein KBQ49_05740 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KBQ49_05760 PF05523 WxcM-like, C-terminal KBQ49_05765 PF01292 Prokaryotic cytochrome b561 KBQ49_05775 PF00034 Cytochrome c KBQ49_05785 PF04542 Sigma-70 region 2 KBQ49_05785 PF08281 Sigma-70, region 4 KBQ49_05795 PF00082 Subtilase family KBQ49_05800 PF01578 Cytochrome C assembly protein KBQ49_05810 PF03100 CcmE KBQ49_05815 PF01578 Cytochrome C assembly protein KBQ49_05815 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal KBQ49_05820 PF08534 Redoxin KBQ49_05825 PF03918 Cytochrome C biogenesis protein KBQ49_05840 PF00654 Voltage gated chloride channel KBQ49_05845 PF00004 ATPase family associated with various cellular activities (AAA) KBQ49_05845 PF16193 AAA C-terminal domain KBQ49_05845 PF12002 MgsA AAA+ ATPase C terminal KBQ49_05855 PF03548 Outer membrane lipoprotein carrier protein LolA KBQ49_05865 PF17854 FtsK alpha domain KBQ49_05865 PF01580 FtsK/SpoIIIE family KBQ49_05865 PF09397 Ftsk gamma domain KBQ49_05865 PF13491 4TM region of DNA translocase FtsK/SpoIIIE KBQ49_05870 PF07992 Pyridine nucleotide-disulphide oxidoreductase KBQ49_05880 PF03588 Leucyl/phenylalanyl-tRNA protein transferase KBQ49_05885 PF01176 Translation initiation factor 1A / IF-1 KBQ49_05890 PF17871 AAA lid domain KBQ49_05890 PF02861 Clp amino terminal domain, pathogenicity island component KBQ49_05890 PF10431 C-terminal, D2-small domain, of ClpB protein KBQ49_05890 PF00004 ATPase family associated with various cellular activities (AAA) KBQ49_05890 PF07724 AAA domain (Cdc48 subfamily) KBQ49_05895 PF02617 ATP-dependent Clp protease adaptor protein ClpS KBQ49_05905 PF00293 NUDIX domain KBQ49_05915 PF04356 Protein of unknown function (DUF489) KBQ49_05920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KBQ49_05920 PF00672 HAMP domain KBQ49_05920 PF12729 Four helix bundle sensory module for signal transduction KBQ49_05930 PF00005 ABC transporter KBQ49_05940 PF00563 EAL domain KBQ49_05940 PF03707 Bacterial signalling protein N terminal repeat KBQ49_05940 PF00990 Diguanylate cyclase, GGDEF domain KBQ49_05945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KBQ49_05945 PF07730 Histidine kinase KBQ49_05950 PF03707 Bacterial signalling protein N terminal repeat KBQ49_05950 PF00563 EAL domain KBQ49_05950 PF00990 Diguanylate cyclase, GGDEF domain KBQ49_05955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KBQ49_05955 PF00512 His Kinase A (phospho-acceptor) domain KBQ49_05955 PF00072 Response regulator receiver domain KBQ49_05955 PF08448 PAS fold KBQ49_05955 PF13188 PAS domain KBQ49_05975 PF01584 CheW-like domain KBQ49_05975 PF00072 Response regulator receiver domain KBQ49_05985 PF00460 Flagella basal body rod protein KBQ49_05985 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KBQ49_05990 PF13861 FlgD Tudor-like domain KBQ49_05990 PF03963 Flagellar hook capping protein - N-terminal region KBQ49_05990 PF13860 FlgD Ig-like domain KBQ49_05995 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KBQ49_05995 PF07559 Flagellar basal body protein FlaE KBQ49_05995 PF00460 Flagella basal body rod protein KBQ49_06000 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KBQ49_06000 PF00460 Flagella basal body rod protein KBQ49_06005 PF00460 Flagella basal body rod protein KBQ49_06005 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KBQ49_06010 PF02107 Flagellar L-ring protein KBQ49_06015 PF02119 Flagellar P-ring protein KBQ49_06020 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase KBQ49_06020 PF10135 Rod binding protein KBQ49_06025 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KBQ49_06025 PF00460 Flagella basal body rod protein KBQ49_06025 PF00460 Flagella basal body rod protein KBQ49_06025 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KBQ49_06030 PF00669 Bacterial flagellin N-terminal helical region KBQ49_06035 PF00669 Bacterial flagellin N-terminal helical region KBQ49_06035 PF00700 Bacterial flagellin C-terminal helical region KBQ49_06040 PF07196 Flagellin hook IN motif KBQ49_06040 PF07195 Flagellar hook-associated protein 2 C-terminus KBQ49_06040 PF02465 Flagellar hook-associated protein 2 N-terminus KBQ49_06045 PF02561 Flagellar protein FliS KBQ49_06060 PF00196 Bacterial regulatory proteins, luxR family KBQ49_06060 PF00072 Response regulator receiver domain KBQ49_06065 PF00309 Sigma-54 factor, Activator interacting domain (AID) KBQ49_06065 PF04963 Sigma-54 factor, core binding domain KBQ49_06065 PF04552 Sigma-54, DNA binding domain KBQ49_06070 PF01339 CheB methylesterase KBQ49_06070 PF00072 Response regulator receiver domain KBQ49_06075 PF06490 Flagellar regulatory protein FleQ KBQ49_06075 PF02954 Bacterial regulatory protein, Fis family KBQ49_06075 PF00158 Sigma-54 interaction domain KBQ49_06080 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KBQ49_06090 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KBQ49_06090 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KBQ49_06145 PF00534 Glycosyl transferases group 1 KBQ49_06145 PF00535 Glycosyl transferase family 2 KBQ49_06150 PF02049 Flagellar hook-basal body complex protein FliE KBQ49_06155 PF01514 Secretory protein of YscJ/FliF family KBQ49_06155 PF08345 Flagellar M-ring protein C-terminal KBQ49_06160 PF14842 FliG N-terminal domain KBQ49_06160 PF01706 FliG C-terminal domain KBQ49_06160 PF14841 FliG middle domain KBQ49_06170 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KBQ49_06170 PF18269 T3SS EscN ATPase C-terminal domain KBQ49_06190 PF02154 Flagellar motor switch protein FliM KBQ49_06190 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KBQ49_06195 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KBQ49_06200 PF04347 Flagellar biosynthesis protein, FliO KBQ49_06205 PF00813 FliP family KBQ49_06210 PF01313 Bacterial export proteins, family 3 KBQ49_06215 PF01311 Bacterial export proteins, family 1 KBQ49_06220 PF00990 Diguanylate cyclase, GGDEF domain KBQ49_06230 PF01312 FlhB HrpN YscU SpaS Family KBQ49_06235 PF00771 FHIPEP family KBQ49_06240 PF00448 SRP54-type protein, GTPase domain KBQ49_06245 PF10609 NUBPL iron-transfer P-loop NTPase KBQ49_06250 PF04542 Sigma-70 region 2 KBQ49_06250 PF04545 Sigma-70, region 4 KBQ49_06250 PF04539 Sigma-70 region 3 KBQ49_06255 PF00072 Response regulator receiver domain KBQ49_06260 PF04344 Chemotaxis phosphatase, CheZ KBQ49_06265 PF02895 Signal transducing histidine kinase, homodimeric domain KBQ49_06265 PF00072 Response regulator receiver domain KBQ49_06265 PF01627 Hpt domain KBQ49_06265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KBQ49_06265 PF01584 CheW-like domain KBQ49_06270 PF01618 MotA/TolQ/ExbB proton channel family KBQ49_06275 PF00691 OmpA family KBQ49_06275 PF13677 Membrane MotB of proton-channel complex MotA/MotB KBQ49_06280 PF13614 AAA domain KBQ49_06285 PF01584 CheW-like domain KBQ49_06295 PF00072 Response regulator receiver domain KBQ49_06300 PF01627 Hpt domain KBQ49_06300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KBQ49_06300 PF01584 CheW-like domain KBQ49_06300 PF09078 CheY binding KBQ49_06300 PF02895 Signal transducing histidine kinase, homodimeric domain KBQ49_06310 PF02203 Tar ligand binding domain homologue KBQ49_06310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KBQ49_06310 PF00672 HAMP domain KBQ49_06315 PF02203 Tar ligand binding domain homologue KBQ49_06315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KBQ49_06315 PF00672 HAMP domain KBQ49_06320 PF02203 Tar ligand binding domain homologue KBQ49_06320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KBQ49_06320 PF00672 HAMP domain KBQ49_06325 PF02203 Tar ligand binding domain homologue KBQ49_06325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KBQ49_06325 PF00672 HAMP domain KBQ49_06335 PF02203 Tar ligand binding domain homologue KBQ49_06335 PF00672 HAMP domain KBQ49_06335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KBQ49_06345 PF00672 HAMP domain KBQ49_06345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KBQ49_06345 PF02203 Tar ligand binding domain homologue KBQ49_06350 PF02203 Tar ligand binding domain homologue KBQ49_06350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KBQ49_06350 PF00672 HAMP domain KBQ49_06355 PF02203 Tar ligand binding domain homologue KBQ49_06355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KBQ49_06355 PF00672 HAMP domain KBQ49_06365 PF02203 Tar ligand binding domain homologue KBQ49_06365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KBQ49_06365 PF00672 HAMP domain KBQ49_06370 PF07238 PilZ domain KBQ49_06370 PF07317 Flagellar regulator YcgR KBQ49_06375 PF01584 CheW-like domain KBQ49_06385 PF00672 HAMP domain KBQ49_06385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KBQ49_06385 PF02203 Tar ligand binding domain homologue KBQ49_06395 PF00672 HAMP domain KBQ49_06395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KBQ49_06400 PF01739 CheR methyltransferase, SAM binding domain KBQ49_06400 PF03705 CheR methyltransferase, all-alpha domain KBQ49_06405 PF03975 CheD chemotactic sensory transduction KBQ49_06410 PF01339 CheB methylesterase KBQ49_06410 PF00072 Response regulator receiver domain KBQ49_06415 PF00563 EAL domain KBQ49_06415 PF00990 Diguanylate cyclase, GGDEF domain KBQ49_06415 PF03707 Bacterial signalling protein N terminal repeat KBQ49_06420 PF17158 Membrane-associated sensor, integral membrane domain KBQ49_06420 PF00990 Diguanylate cyclase, GGDEF domain KBQ49_06425 PF06434 Aconitate hydratase 2 N-terminus KBQ49_06425 PF00330 Aconitase family (aconitate hydratase) KBQ49_06425 PF11791 Aconitate B N-terminal domain KBQ49_06440 PF00330 Aconitase family (aconitate hydratase) KBQ49_06440 PF00694 Aconitase C-terminal domain KBQ49_06450 PF00501 AMP-binding enzyme KBQ49_06450 PF13193 AMP-binding enzyme C-terminal domain KBQ49_06455 PF00378 Enoyl-CoA hydratase/isomerase KBQ49_06460 PF00072 Response regulator receiver domain KBQ49_06460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KBQ49_06460 PF01627 Hpt domain KBQ49_06460 PF00512 His Kinase A (phospho-acceptor) domain KBQ49_06465 PF00072 Response regulator receiver domain KBQ49_06470 PF01336 OB-fold nucleic acid binding domain KBQ49_06470 PF00152 tRNA synthetases class II (D, K and N) KBQ49_06495 PF01081 KDPG and KHG aldolase KBQ49_06500 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KBQ49_06500 PF13378 Enolase C-terminal domain-like KBQ49_06505 PF08450 SMP-30/Gluconolactonase/LRE-like region KBQ49_06510 PF05035 2-keto-3-deoxy-galactonokinase KBQ49_06515 PF00037 4Fe-4S binding domain KBQ49_06515 PF11953 Domain of unknown function (DUF3470) KBQ49_06525 PF00701 Dihydrodipicolinate synthetase family KBQ49_06535 PF00578 AhpC/TSA family KBQ49_06540 PF13638 PIN domain KBQ49_06540 PF02562 PhoH-like protein KBQ49_06555 PF08543 Phosphomethylpyrimidine kinase KBQ49_06575 PF03466 LysR substrate binding domain KBQ49_06575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KBQ49_06580 PF17954 Quercetinase C-terminal cupin domain KBQ49_06580 PF02678 Pirin KBQ49_06585 PF00128 Alpha amylase, catalytic domain KBQ49_06585 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KBQ49_06615 PF07664 Ferrous iron transport protein B C terminus KBQ49_06615 PF02421 Ferrous iron transport protein B KBQ49_06615 PF07670 Nucleoside recognition KBQ49_06625 PF00378 Enoyl-CoA hydratase/isomerase KBQ49_06630 PF00682 HMGL-like KBQ49_06635 PF00106 short chain dehydrogenase KBQ49_06640 PF09285 Elongation factor P, C-terminal KBQ49_06640 PF08207 Elongation factor P (EF-P) KOW-like domain KBQ49_06640 PF01132 Elongation factor P (EF-P) OB domain KBQ49_06660 PF02913 FAD linked oxidases, C-terminal domain KBQ49_06660 PF01565 FAD binding domain KBQ49_06665 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KBQ49_06665 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KBQ49_06680 PF13520 Amino acid permease KBQ49_06685 PF13520 Amino acid permease KBQ49_06690 PF00596 Class II Aldolase and Adducin N-terminal domain KBQ49_06695 PF03079 ARD/ARD' family KBQ49_06720 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase KBQ49_06720 PF01502 Phosphoribosyl-AMP cyclohydrolase KBQ49_06725 PF00977 Histidine biosynthesis protein KBQ49_06730 PF00977 Histidine biosynthesis protein KBQ49_06735 PF00117 Glutamine amidotransferase class-I KBQ49_06740 PF00475 Imidazoleglycerol-phosphate dehydratase KBQ49_06745 PF00155 Aminotransferase class I and II KBQ49_06750 PF00815 Histidinol dehydrogenase KBQ49_06755 PF01634 ATP phosphoribosyltransferase KBQ49_06755 PF08029 HisG, C-terminal domain KBQ49_06765 PF03129 Anticodon binding domain KBQ49_06765 PF13393 Histidyl-tRNA synthetase KBQ49_06770 PF13545 Crp-like helix-turn-helix domain KBQ49_06770 PF00027 Cyclic nucleotide-binding domain KBQ49_06780 PF00291 Pyridoxal-phosphate dependent enzyme KBQ49_06780 PF14821 Threonine synthase N terminus KBQ49_06785 PF07519 Tannase and feruloyl esterase KBQ49_06790 PF13406 Transglycosylase SLT domain KBQ49_06795 PF00288 GHMP kinases N terminal domain KBQ49_06795 PF08544 GHMP kinases C terminal KBQ49_06800 PF00742 Homoserine dehydrogenase KBQ49_06800 PF13840 ACT domain KBQ49_06800 PF01842 ACT domain KBQ49_06800 PF03447 Homoserine dehydrogenase, NAD binding domain KBQ49_06800 PF00696 Amino acid kinase family KBQ49_06815 PF00171 Aldehyde dehydrogenase family KBQ49_06830 PF01180 Dihydroorotate dehydrogenase KBQ49_06835 PF01565 FAD binding domain KBQ49_06835 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KBQ49_06865 PF01569 PAP2 superfamily KBQ49_06870 PF04551 GcpE protein KBQ49_06880 PF00072 Response regulator receiver domain KBQ49_06885 PF03707 Bacterial signalling protein N terminal repeat KBQ49_06885 PF00990 Diguanylate cyclase, GGDEF domain KBQ49_06885 PF00563 EAL domain KBQ49_06890 PF00474 Sodium:solute symporter family KBQ49_06895 PF14310 Fibronectin type III-like domain KBQ49_06895 PF00933 Glycosyl hydrolase family 3 N terminal domain KBQ49_06895 PF01915 Glycosyl hydrolase family 3 C-terminal domain KBQ49_06905 PF02261 Aspartate decarboxylase KBQ49_06915 PF02548 Ketopantoate hydroxymethyltransferase KBQ49_06920 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KBQ49_06925 PF01743 Poly A polymerase head domain KBQ49_06925 PF12626 Polymerase A arginine-rich C-terminus KBQ49_06925 PF12627 Probable RNA and SrmB- binding site of polymerase A KBQ49_06935 PF00132 Bacterial transferase hexapeptide (six repeats) KBQ49_06940 PF02649 Type I GTP cyclohydrolase folE2 KBQ49_06945 PF01520 N-acetylmuramoyl-L-alanine amidase KBQ49_06945 PF11741 AMIN domain KBQ49_06950 PF00083 Sugar (and other) transporter KBQ49_06960 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KBQ49_06960 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KBQ49_06970 PF16338 Domain of unknown function (DUF4968) KBQ49_06970 PF17137 Domain of unknown function (DUF5110) KBQ49_06970 PF01055 Glycosyl hydrolases family 31 KBQ49_06995 PF13683 Integrase core domain KBQ49_06995 PF13276 HTH-like domain KBQ49_07005 PF00171 Aldehyde dehydrogenase family KBQ49_07010 PF01472 PUA domain KBQ49_07010 PF00696 Amino acid kinase family KBQ49_07025 PF00206 Lyase KBQ49_07030 PF01118 Semialdehyde dehydrogenase, NAD binding domain KBQ49_07040 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase KBQ49_07040 PF00696 Amino acid kinase family KBQ49_07045 PF07687 Peptidase dimerisation domain KBQ49_07045 PF01546 Peptidase family M20/M25/M40 KBQ49_07050 PF00764 Arginosuccinate synthase KBQ49_07055 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KBQ49_07055 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KBQ49_07065 PF09190 DALR domain KBQ49_07065 PF01406 tRNA synthetases class I (C) catalytic domain KBQ49_07070 PF02657 Fe-S metabolism associated domain KBQ49_07080 PF00561 alpha/beta hydrolase fold KBQ49_07090 PF01258 Prokaryotic dksA/traR C4-type zinc finger KBQ49_07095 PF01809 Putative membrane protein insertion efficiency factor KBQ49_07100 PF01979 Amidohydrolase family KBQ49_07115 PF01095 Pectinesterase KBQ49_07120 PF00295 Glycosyl hydrolases family 28 KBQ49_07135 PF13419 Haloacid dehalogenase-like hydrolase KBQ49_07145 PF01979 Amidohydrolase family KBQ49_07150 PF06736 Protein of unknown function (DUF1211) KBQ49_07155 PF01132 Elongation factor P (EF-P) OB domain KBQ49_07155 PF08207 Elongation factor P (EF-P) KOW-like domain KBQ49_07155 PF09285 Elongation factor P, C-terminal KBQ49_07160 PF04055 Radical SAM superfamily KBQ49_07165 PF00360 Phytochrome region KBQ49_07165 PF00990 Diguanylate cyclase, GGDEF domain KBQ49_07165 PF01590 GAF domain KBQ49_07165 PF00563 EAL domain KBQ49_07175 PF00588 SpoU rRNA Methylase family KBQ49_07185 PF02355 Protein export membrane protein KBQ49_07185 PF07549 SecD/SecF GG Motif KBQ49_07190 PF07549 SecD/SecF GG Motif KBQ49_07190 PF13721 SecD export protein N-terminal TM region KBQ49_07190 PF02355 Protein export membrane protein KBQ49_07195 PF02699 Preprotein translocase subunit KBQ49_07200 PF01702 Queuine tRNA-ribosyltransferase KBQ49_07205 PF02547 Queuosine biosynthesis protein KBQ49_07215 PF00202 Aminotransferase class-III KBQ49_07230 PF00759 Glycosyl hydrolase family 9 KBQ49_07230 PF02927 Cellulase N-terminal ig-like domain KBQ49_07235 PF00753 Metallo-beta-lactamase superfamily KBQ49_07245 PF00037 4Fe-4S binding domain KBQ49_07255 PF01467 Cytidylyltransferase-like KBQ49_07265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KBQ49_07265 PF00183 Hsp90 protein KBQ49_07270 PF02615 Malate/L-lactate dehydrogenase KBQ49_07275 PF07715 TonB-dependent Receptor Plug Domain KBQ49_07275 PF00593 TonB dependent receptor KBQ49_07285 PF00593 TonB dependent receptor KBQ49_07285 PF07715 TonB-dependent Receptor Plug Domain KBQ49_07290 PF00326 Prolyl oligopeptidase family KBQ49_07290 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region KBQ49_07295 PF04616 Glycosyl hydrolases family 43 KBQ49_07300 PF07532 Bacterial Ig-like domain (group 4) KBQ49_07305 PF00593 TonB dependent receptor KBQ49_07305 PF07715 TonB-dependent Receptor Plug Domain KBQ49_07330 PF13520 Amino acid permease KBQ49_07345 PF01321 Creatinase/Prolidase N-terminal domain KBQ49_07345 PF00557 Metallopeptidase family M24 KBQ49_07350 PF00171 Aldehyde dehydrogenase family KBQ49_07355 PF00701 Dihydrodipicolinate synthetase family KBQ49_07360 PF07992 Pyridine nucleotide-disulphide oxidoreductase KBQ49_07360 PF04324 BFD-like [2Fe-2S] binding domain KBQ49_07370 PF01266 FAD dependent oxidoreductase KBQ49_07375 PF05544 Proline racemase KBQ49_07385 PF02881 SRP54-type protein, helical bundle domain KBQ49_07385 PF00448 SRP54-type protein, GTPase domain KBQ49_07395 PF04362 Bacterial Fe(2+) trafficking KBQ49_07415 PF01612 3'-5' exonuclease KBQ49_07415 PF00570 HRDC domain KBQ49_07435 PF01584 CheW-like domain KBQ49_07440 PF02203 Tar ligand binding domain homologue KBQ49_07440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KBQ49_07440 PF00672 HAMP domain KBQ49_07445 PF00672 HAMP domain KBQ49_07445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KBQ49_07445 PF02743 Cache domain KBQ49_07465 PF13188 PAS domain KBQ49_07465 PF00563 EAL domain KBQ49_07465 PF00990 Diguanylate cyclase, GGDEF domain KBQ49_07465 PF03707 Bacterial signalling protein N terminal repeat KBQ49_07475 PF00013 KH domain KBQ49_07475 PF00575 S1 RNA binding domain KBQ49_07475 PF03725 3' exoribonuclease family, domain 2 KBQ49_07475 PF01138 3' exoribonuclease family, domain 1 KBQ49_07475 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KBQ49_07480 PF00312 Ribosomal protein S15 KBQ49_07485 PF01509 TruB family pseudouridylate synthase (N terminal domain) KBQ49_07485 PF16198 tRNA pseudouridylate synthase B C-terminal domain KBQ49_07485 PF09157 Pseudouridine synthase II TruB, C-terminal KBQ49_07490 PF02033 Ribosome-binding factor A KBQ49_07495 PF04760 Translation initiation factor IF-2, N-terminal region KBQ49_07495 PF11987 Translation-initiation factor 2 KBQ49_07495 PF00009 Elongation factor Tu GTP binding domain KBQ49_07495 PF08364 Bacterial translation initiation factor IF-2 associated region KBQ49_07500 PF13184 NusA-like KH domain KBQ49_07500 PF08529 NusA N-terminal domain KBQ49_07500 PF00575 S1 RNA binding domain KBQ49_07505 PF02576 RimP N-terminal domain KBQ49_07505 PF17384 RimP C-terminal SH3 domain KBQ49_07515 PF00361 Proton-conducting membrane transporter KBQ49_07520 PF00361 Proton-conducting membrane transporter KBQ49_07520 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus KBQ49_07525 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KBQ49_07525 PF00361 Proton-conducting membrane transporter KBQ49_07530 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KBQ49_07535 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 KBQ49_07540 PF12838 4Fe-4S dicluster domain KBQ49_07545 PF00146 NADH dehydrogenase KBQ49_07550 PF00384 Molybdopterin oxidoreductase KBQ49_07550 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KBQ49_07550 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal KBQ49_07555 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit KBQ49_07555 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region KBQ49_07555 PF10531 SLBB domain KBQ49_07565 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit KBQ49_07570 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit KBQ49_07575 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit KBQ49_07580 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 KBQ49_07595 PF00121 Triosephosphate isomerase KBQ49_07605 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KBQ49_07605 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KBQ49_07605 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KBQ49_07605 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KBQ49_07610 PF17848 Acetyl-coA carboxylase zinc finger domain KBQ49_07610 PF01039 Carboxyl transferase domain KBQ49_07615 PF00290 Tryptophan synthase alpha chain KBQ49_07625 PF00291 Pyridoxal-phosphate dependent enzyme KBQ49_07630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KBQ49_07630 PF03466 LysR substrate binding domain KBQ49_07640 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase KBQ49_07645 PF01416 tRNA pseudouridine synthase KBQ49_07655 PF01118 Semialdehyde dehydrogenase, NAD binding domain KBQ49_07655 PF02774 Semialdehyde dehydrogenase, dimerisation domain KBQ49_07660 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KBQ49_07660 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KBQ49_07665 PF01264 Chorismate synthase KBQ49_07670 PF05175 Methyltransferase small domain KBQ49_07675 PF02630 SCO1/SenC KBQ49_07680 PF02666 Phosphatidylserine decarboxylase KBQ49_07685 PF06737 Transglycosylase-like domain KBQ49_07690 PF05872 Bacterial protein of unknown function (DUF853) KBQ49_07695 PF00293 NUDIX domain KBQ49_07710 PF01272 Transcription elongation factor, GreA/GreB, C-term KBQ49_07710 PF03449 Transcription elongation factor, N-terminal KBQ49_07715 PF01738 Dienelactone hydrolase family KBQ49_07730 PF06271 RDD family KBQ49_07735 PF00692 dUTPase KBQ49_07740 PF10609 NUBPL iron-transfer P-loop NTPase KBQ49_07750 PF07715 TonB-dependent Receptor Plug Domain KBQ49_07750 PF00593 TonB dependent receptor KBQ49_07760 PF07715 TonB-dependent Receptor Plug Domain KBQ49_07760 PF00593 TonB dependent receptor KBQ49_07765 PF13181 Tetratricopeptide repeat KBQ49_07780 PF01431 Peptidase family M13 KBQ49_07780 PF05649 Peptidase family M13 KBQ49_07820 PF00892 EamA-like transporter family KBQ49_07825 PF15457 Type III T3SS secreted effector HopW1-1/HopPmaA KBQ49_07830 PF15457 Type III T3SS secreted effector HopW1-1/HopPmaA KBQ49_07835 PF07992 Pyridine nucleotide-disulphide oxidoreductase KBQ49_07835 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KBQ49_07840 PF01266 FAD dependent oxidoreductase KBQ49_07845 PF04235 Protein of unknown function (DUF418) KBQ49_07850 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KBQ49_07855 PF00877 NlpC/P60 family KBQ49_07860 PF00877 NlpC/P60 family KBQ49_07875 PF03061 Thioesterase superfamily KBQ49_07885 PF00375 Sodium:dicarboxylate symporter family KBQ49_07890 PF00245 Alkaline phosphatase KBQ49_07900 PF11734 TilS substrate C-terminal domain KBQ49_07900 PF09179 TilS substrate binding domain KBQ49_07900 PF01171 PP-loop family KBQ49_07905 PF02609 Exonuclease VII small subunit KBQ49_07910 PF00348 Polyprenyl synthetase KBQ49_07915 PF00486 Transcriptional regulatory protein, C terminal KBQ49_07915 PF00072 Response regulator receiver domain KBQ49_07920 PF00034 Cytochrome c KBQ49_07920 PF03150 Di-haem cytochrome c peroxidase KBQ49_07925 PF00512 His Kinase A (phospho-acceptor) domain KBQ49_07925 PF08448 PAS fold KBQ49_07925 PF13188 PAS domain KBQ49_07925 PF00072 Response regulator receiver domain KBQ49_07925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KBQ49_07930 PF03466 LysR substrate binding domain KBQ49_07930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KBQ49_07935 PF06812 ImpA, N-terminal, type VI secretion system KBQ49_07945 PF03793 PASTA domain KBQ49_07945 PF00069 Protein kinase domain KBQ49_07960 PF06761 Intracellular multiplication and human macrophage-killing KBQ49_07960 PF14331 ImcF-related N-terminal domain KBQ49_07960 PF06744 Type VI secretion protein IcmF C-terminal KBQ49_07970 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE KBQ49_07985 PF06715 Gp5 C-terminal repeat (3 copies) KBQ49_07985 PF04717 Type VI secretion system, phage-baseplate injector KBQ49_07995 PF00004 ATPase family associated with various cellular activities (AAA) KBQ49_07995 PF07724 AAA domain (Cdc48 subfamily) KBQ49_07995 PF17871 AAA lid domain KBQ49_07995 PF10431 C-terminal, D2-small domain, of ClpB protein KBQ49_08005 PF05947 Type VI secretion system, TssF KBQ49_08010 PF04965 Gene 25-like lysozyme KBQ49_08015 PF07024 ImpE protein KBQ49_08025 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath KBQ49_08030 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 KBQ49_08045 PF01523 Putative modulator of DNA gyrase KBQ49_08050 PF04751 Protein of unknown function (DUF615) KBQ49_08055 PF01523 Putative modulator of DNA gyrase KBQ49_08065 PF10150 Ribonuclease E/G family KBQ49_08065 PF00575 S1 RNA binding domain KBQ49_08070 PF02545 Maf-like protein KBQ49_08075 PF04402 Protein of unknown function (DUF541) KBQ49_08090 PF02590 Predicted SPOUT methyltransferase KBQ49_08105 PF01467 Cytidylyltransferase-like KBQ49_08120 PF13603 Leucyl-tRNA synthetase, Domain 2 KBQ49_08120 PF08264 Anticodon-binding domain of tRNA KBQ49_08120 PF00133 tRNA synthetases class I (I, L, M and V) KBQ49_08130 PF00085 Thioredoxin KBQ49_08145 PF02592 Putative vitamin uptake transporter KBQ49_08155 PF02574 Homocysteine S-methyltransferase KBQ49_08160 PF00324 Amino acid permease KBQ49_08170 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KBQ49_08190 PF04060 Putative Fe-S cluster KBQ49_08205 PF04542 Sigma-70 region 2 KBQ49_08205 PF04545 Sigma-70, region 4 KBQ49_08250 PF01042 Endoribonuclease L-PSP KBQ49_08260 PF03706 Lysylphosphatidylglycerol synthase TM region KBQ49_08260 PF09924 Uncharacterised conserved protein (DUF2156) KBQ49_08290 PF07690 Major Facilitator Superfamily KBQ49_08295 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KBQ49_08300 PF03831 PhnA domain KBQ49_08300 PF08274 PhnA Zinc-Ribbon KBQ49_08305 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KBQ49_08315 PF05175 Methyltransferase small domain KBQ49_08315 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus KBQ49_08345 PF01258 Prokaryotic dksA/traR C4-type zinc finger KBQ49_08355 PF01863 Protein of unknown function DUF45 KBQ49_08370 PF13472 GDSL-like Lipase/Acylhydrolase family KBQ49_08375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KBQ49_08375 PF00512 His Kinase A (phospho-acceptor) domain KBQ49_08375 PF01627 Hpt domain KBQ49_08375 PF00072 Response regulator receiver domain KBQ49_08375 PF00672 HAMP domain KBQ49_08380 PF01011 PQQ enzyme repeat KBQ49_08380 PF13360 PQQ-like domain KBQ49_08385 PF07729 FCD domain KBQ49_08385 PF00392 Bacterial regulatory proteins, gntR family KBQ49_08390 PF02929 Beta galactosidase small chain KBQ49_08390 PF16353 Domain of unknown function(DUF4981) KBQ49_08390 PF02836 Glycosyl hydrolases family 2, TIM barrel domain KBQ49_08390 PF02837 Glycosyl hydrolases family 2, sugar binding domain KBQ49_08390 PF00703 Glycosyl hydrolases family 2 KBQ49_08405 PF04820 Tryptophan halogenase KBQ49_08455 PF02310 B12 binding domain KBQ49_08455 PF01642 Methylmalonyl-CoA mutase KBQ49_08475 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KBQ49_08475 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KBQ49_08480 PF03797 Autotransporter beta-domain KBQ49_08480 PF00082 Subtilase family KBQ49_08480 PF12951 Passenger-associated-transport-repeat KBQ49_08485 PF02803 Thiolase, C-terminal domain KBQ49_08485 PF00108 Thiolase, N-terminal domain KBQ49_08495 PF00012 Hsp70 protein KBQ49_08510 PF00990 Diguanylate cyclase, GGDEF domain KBQ49_08510 PF00072 Response regulator receiver domain KBQ49_08525 PF04679 ATP dependent DNA ligase C terminal region KBQ49_08525 PF01068 ATP dependent DNA ligase domain KBQ49_08525 PF04675 DNA ligase N terminus KBQ49_08530 PF04679 ATP dependent DNA ligase C terminal region KBQ49_08530 PF01068 ATP dependent DNA ligase domain KBQ49_08530 PF04675 DNA ligase N terminus KBQ49_08535 PF00271 Helicase conserved C-terminal domain KBQ49_08535 PF08494 DEAD/H associated KBQ49_08535 PF00270 DEAD/DEAH box helicase KBQ49_08545 PF01494 FAD binding domain KBQ49_08550 PF00313 'Cold-shock' DNA-binding domain KBQ49_08555 PF01048 Phosphorylase superfamily KBQ49_08560 PF00156 Phosphoribosyl transferase domain KBQ49_08565 PF00933 Glycosyl hydrolase family 3 N terminal domain KBQ49_08575 PF01928 CYTH domain KBQ49_08580 PF05958 tRNA (Uracil-5-)-methyltransferase KBQ49_08585 PF00486 Transcriptional regulatory protein, C terminal KBQ49_08585 PF00072 Response regulator receiver domain KBQ49_08590 PF11967 Recombination protein O N terminal KBQ49_08590 PF02565 Recombination protein O C terminal KBQ49_08595 PF07650 KH domain KBQ49_08595 PF01926 50S ribosome-binding GTPase KBQ49_08600 PF00035 Double-stranded RNA binding motif KBQ49_08600 PF14622 Ribonuclease-III-like KBQ49_08610 PF10502 Signal peptidase, peptidase S26 KBQ49_08615 PF00009 Elongation factor Tu GTP binding domain KBQ49_08615 PF00679 Elongation factor G C-terminus KBQ49_08615 PF06421 GTP-binding protein LepA C-terminus KBQ49_08615 PF03144 Elongation factor Tu domain 2 KBQ49_08620 PF13180 PDZ domain KBQ49_08630 PF04542 Sigma-70 region 2 KBQ49_08630 PF08281 Sigma-70, region 4 KBQ49_08635 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KBQ49_08635 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KBQ49_08635 PF00378 Enoyl-CoA hydratase/isomerase KBQ49_08650 PF01545 Cation efflux family KBQ49_08655 PF03601 Conserved hypothetical protein 698 KBQ49_08660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KBQ49_08660 PF03466 LysR substrate binding domain KBQ49_08670 PF05188 MutS domain II KBQ49_08670 PF05192 MutS domain III KBQ49_08670 PF05190 MutS family domain IV KBQ49_08670 PF00488 MutS domain V KBQ49_08670 PF01624 MutS domain I KBQ49_08685 PF00141 Peroxidase KBQ49_08690 PF01479 S4 domain KBQ49_08700 PF01554 MatE KBQ49_08705 PF01245 Ribosomal protein L19 KBQ49_08710 PF01746 tRNA (Guanine-1)-methyltransferase KBQ49_08715 PF01782 RimM N-terminal domain KBQ49_08715 PF05239 PRC-barrel domain KBQ49_08720 PF00886 Ribosomal protein S16 KBQ49_08730 PF03060 Nitronate monooxygenase KBQ49_08735 PF00448 SRP54-type protein, GTPase domain KBQ49_08735 PF02881 SRP54-type protein, helical bundle domain KBQ49_08735 PF02978 Signal peptide binding domain KBQ49_08745 PF01263 Aldose 1-epimerase KBQ49_08750 PF06964 Alpha-L-arabinofuranosidase C-terminal domain KBQ49_08760 PF00999 Sodium/hydrogen exchanger family KBQ49_08770 PF00043 Glutathione S-transferase, C-terminal domain KBQ49_08770 PF13417 Glutathione S-transferase, N-terminal domain KBQ49_08775 PF10566 Glycoside hydrolase 97 KBQ49_08775 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation KBQ49_08775 PF14508 Glycosyl-hydrolase 97 N-terminal KBQ49_08785 PF02653 Branched-chain amino acid transport system / permease component KBQ49_08790 PF02653 Branched-chain amino acid transport system / permease component KBQ49_08795 PF00005 ABC transporter KBQ49_08800 PF13407 Periplasmic binding protein domain KBQ49_08805 PF00171 Aldehyde dehydrogenase family KBQ49_08815 PF03466 LysR substrate binding domain KBQ49_08815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KBQ49_08825 PF00920 Dehydratase family KBQ49_08830 PF01464 Transglycosylase SLT domain KBQ49_08850 PF03958 Bacterial type II/III secretion system short domain KBQ49_08850 PF00263 Bacterial type II and III secretion system protein KBQ49_08855 PF12833 Helix-turn-helix domain KBQ49_08870 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KBQ49_08870 PF02874 ATP synthase alpha/beta family, beta-barrel domain KBQ49_08870 PF18269 T3SS EscN ATPase C-terminal domain KBQ49_08885 PF01514 Secretory protein of YscJ/FliF family KBQ49_08900 PF01312 FlhB HrpN YscU SpaS Family KBQ49_08905 PF00771 FHIPEP family KBQ49_08920 PF00813 FliP family KBQ49_08925 PF01313 Bacterial export proteins, family 3 KBQ49_08955 PF00072 Response regulator receiver domain KBQ49_08955 PF00486 Transcriptional regulatory protein, C terminal KBQ49_08980 PF04542 Sigma-70 region 2 KBQ49_08980 PF08281 Sigma-70, region 4 KBQ49_09005 PF18073 Rubredoxin metal binding domain KBQ49_09010 PF00155 Aminotransferase class I and II KBQ49_09020 PF03626 Prokaryotic Cytochrome C oxidase subunit IV KBQ49_09025 PF00510 Cytochrome c oxidase subunit III KBQ49_09030 PF00115 Cytochrome C and Quinol oxidase polypeptide I KBQ49_09035 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KBQ49_09035 PF06481 COX Aromatic Rich Motif KBQ49_09055 PF02401 LytB protein KBQ49_09060 PF01252 Signal peptidase (SPase) II KBQ49_09065 PF06827 Zinc finger found in FPG and IleRS KBQ49_09065 PF08264 Anticodon-binding domain of tRNA KBQ49_09065 PF00133 tRNA synthetases class I (I, L, M and V) KBQ49_09070 PF06574 FAD synthetase KBQ49_09070 PF01687 Riboflavin kinase KBQ49_09085 PF03023 Lipid II flippase MurJ KBQ49_09090 PF01649 Ribosomal protein S20 KBQ49_09095 PF01926 50S ribosome-binding GTPase KBQ49_09095 PF01018 GTP1/OBG KBQ49_09100 PF01016 Ribosomal L27 protein KBQ49_09105 PF00829 Ribosomal prokaryotic L21 protein KBQ49_09110 PF00005 ABC transporter KBQ49_09110 PF17760 UvrA interaction domain KBQ49_09110 PF17755 UvrA DNA-binding domain KBQ49_09125 PF00378 Enoyl-CoA hydratase/isomerase KBQ49_09145 PF04377 Arginine-tRNA-protein transferase, C terminus KBQ49_09145 PF04376 Arginine-tRNA-protein transferase, N terminus KBQ49_09160 PF01370 NAD dependent epimerase/dehydratase family KBQ49_09160 PF02222 ATP-grasp domain KBQ49_09185 PF12146 Serine aminopeptidase, S33 KBQ49_09185 PF13026 Protein of unknown function (DUF3887) KBQ49_09210 PF13291 ACT domain KBQ49_09210 PF04607 Region found in RelA / SpoT proteins KBQ49_09210 PF02824 TGS domain KBQ49_09225 PF12706 Beta-lactamase superfamily domain KBQ49_09230 PF03070 TENA/THI-4/PQQC family KBQ49_09235 PF05402 Coenzyme PQQ synthesis protein D (PqqD) KBQ49_09240 PF04055 Radical SAM superfamily KBQ49_09240 PF13186 Iron-sulfur cluster-binding domain KBQ49_09250 PF00654 Voltage gated chloride channel KBQ49_09255 PF00270 DEAD/DEAH box helicase KBQ49_09255 PF11898 Domain of unknown function (DUF3418) KBQ49_09255 PF04408 Helicase associated domain (HA2) KBQ49_09255 PF00271 Helicase conserved C-terminal domain KBQ49_09255 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold KBQ49_09260 PF00210 Ferritin-like domain KBQ49_09265 PF09382 RQC domain KBQ49_09265 PF16124 RecQ zinc-binding KBQ49_09265 PF00570 HRDC domain KBQ49_09265 PF00271 Helicase conserved C-terminal domain KBQ49_09265 PF00270 DEAD/DEAH box helicase KBQ49_09285 PF06508 Queuosine biosynthesis protein QueC KBQ49_09290 PF04055 Radical SAM superfamily KBQ49_09300 PF00691 OmpA family KBQ49_09305 PF07676 WD40-like Beta Propeller Repeat KBQ49_09305 PF04052 TolB amino-terminal domain KBQ49_09315 PF02472 Biopolymer transport protein ExbD/TolR KBQ49_09320 PF01618 MotA/TolQ/ExbB proton channel family KBQ49_09325 PF03061 Thioesterase superfamily KBQ49_09330 PF05491 RuvB C-terminal winged helix domain KBQ49_09330 PF17864 RuvB AAA lid domain KBQ49_09330 PF05496 Holliday junction DNA helicase RuvB P-loop domain KBQ49_09335 PF02705 K+ potassium transporter KBQ49_09340 PF07499 RuvA, C-terminal domain KBQ49_09340 PF01330 RuvA N terminal domain KBQ49_09345 PF02075 Crossover junction endodeoxyribonuclease RuvC KBQ49_09350 PF01709 Transcriptional regulator KBQ49_09370 PF01336 OB-fold nucleic acid binding domain KBQ49_09370 PF02938 GAD domain KBQ49_09370 PF00152 tRNA synthetases class II (D, K and N) KBQ49_09390 PF03932 CutC family KBQ49_09395 PF01112 Asparaginase KBQ49_09445 PF00072 Response regulator receiver domain KBQ49_09445 PF01339 CheB methylesterase KBQ49_09450 PF01627 Hpt domain KBQ49_09450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KBQ49_09450 PF02895 Signal transducing histidine kinase, homodimeric domain KBQ49_09450 PF01584 CheW-like domain KBQ49_09450 PF00072 Response regulator receiver domain KBQ49_09455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KBQ49_09455 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term KBQ49_09460 PF01584 CheW-like domain KBQ49_09465 PF00072 Response regulator receiver domain KBQ49_09470 PF00072 Response regulator receiver domain KBQ49_09475 PF02951 Prokaryotic glutathione synthetase, N-terminal domain KBQ49_09475 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain KBQ49_09485 PF00593 TonB dependent receptor KBQ49_09490 PF00814 Glycoprotease family KBQ49_09495 PF13307 Helicase C-terminal domain KBQ49_09495 PF04851 Type III restriction enzyme, res subunit KBQ49_09505 PF00912 Transglycosylase KBQ49_09505 PF14814 Bifunctional transglycosylase second domain KBQ49_09505 PF00905 Penicillin binding protein transpeptidase domain KBQ49_09510 PF00535 Glycosyl transferase family 2 KBQ49_09515 PF00730 HhH-GPD superfamily base excision DNA repair protein KBQ49_09530 PF00196 Bacterial regulatory proteins, luxR family KBQ49_09530 PF00072 Response regulator receiver domain KBQ49_09535 PF07730 Histidine kinase KBQ49_09545 PF03775 Septum formation inhibitor MinC, C-terminal domain KBQ49_09545 PF05209 Septum formation inhibitor MinC, N-terminal domain KBQ49_09550 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KBQ49_09555 PF03776 Septum formation topological specificity factor MinE KBQ49_09565 PF13493 Domain of unknown function (DUF4118) KBQ49_09565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KBQ49_09565 PF00512 His Kinase A (phospho-acceptor) domain KBQ49_09565 PF02702 Osmosensitive K+ channel His kinase sensor domain KBQ49_09570 PF00072 Response regulator receiver domain KBQ49_09570 PF00486 Transcriptional regulatory protein, C terminal KBQ49_09580 PF00884 Sulfatase KBQ49_09580 PF08019 Phosphoethanolamine transferase EptA/EptB KBQ49_09675 PF07690 Major Facilitator Superfamily KBQ49_09680 PF03412 Peptidase C39 family KBQ49_09680 PF00005 ABC transporter KBQ49_09680 PF00664 ABC transporter transmembrane region KBQ49_09700 PF02347 Glycine cleavage system P-protein KBQ49_09715 PF00199 Catalase KBQ49_09715 PF06628 Catalase-related immune-responsive KBQ49_09715 PF18011 C-terminal domain found in long catalases KBQ49_09730 PF02585 GlcNAc-PI de-N-acetylase KBQ49_09740 PF08240 Alcohol dehydrogenase GroES-like domain KBQ49_09740 PF13823 Alcohol dehydrogenase GroES-associated KBQ49_09740 PF00107 Zinc-binding dehydrogenase KBQ49_09750 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain KBQ49_09750 PF06165 Glycosyltransferase family 36 KBQ49_09750 PF10091 Putative glucoamylase KBQ49_09775 PF17755 UvrA DNA-binding domain KBQ49_09860 PF02384 N-6 DNA Methylase KBQ49_09875 PF01433 Peptidase family M1 domain KBQ49_09890 PF00709 Adenylosuccinate synthetase KBQ49_09900 PF01145 SPFH domain / Band 7 family KBQ49_09905 PF01145 SPFH domain / Band 7 family KBQ49_09905 PF12221 Bacterial membrane protein N terminal KBQ49_09910 PF08240 Alcohol dehydrogenase GroES-like domain KBQ49_09910 PF00107 Zinc-binding dehydrogenase KBQ49_09915 PF00072 Response regulator receiver domain KBQ49_09925 PF00226 DnaJ domain KBQ49_09925 PF01556 DnaJ C terminal domain KBQ49_09935 PF08534 Redoxin KBQ49_09945 PF00905 Penicillin binding protein transpeptidase domain KBQ49_09945 PF00912 Transglycosylase KBQ49_09945 PF06832 Penicillin-Binding Protein C-terminus Family KBQ49_09965 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain KBQ49_09965 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain KBQ49_09965 PF11974 Bacterial alpha-2-macroglobulin MG3 domain KBQ49_09965 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain KBQ49_09965 PF17962 Bacterial macroglobulin domain 6 KBQ49_09965 PF01835 MG2 domain KBQ49_09965 PF07703 Alpha-2-macroglobulin bait region domain KBQ49_09965 PF00207 Alpha-2-macroglobulin family KBQ49_09980 PF07715 TonB-dependent Receptor Plug Domain KBQ49_09980 PF00593 TonB dependent receptor KBQ49_09990 PF03377 TAL effector repeat KBQ49_10005 PF04303 PrpF protein KBQ49_10015 PF00694 Aconitase C-terminal domain KBQ49_10015 PF00330 Aconitase family (aconitate hydratase) KBQ49_10020 PF00285 Citrate synthase, C-terminal domain KBQ49_10030 PF00285 Citrate synthase, C-terminal domain KBQ49_10055 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system KBQ49_10060 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system KBQ49_10075 PF09115 DNA polymerase III, delta subunit, C terminal KBQ49_10080 PF02223 Thymidylate kinase KBQ49_10085 PF02618 YceG-like family KBQ49_10090 PF04715 Anthranilate synthase component I, N terminal region KBQ49_10090 PF00425 chorismate binding enzyme KBQ49_10095 PF02801 Beta-ketoacyl synthase, C-terminal domain KBQ49_10095 PF00109 Beta-ketoacyl synthase, N-terminal domain KBQ49_10100 PF00550 Phosphopantetheine attachment site KBQ49_10110 PF00698 Acyl transferase domain KBQ49_10115 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KBQ49_10115 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KBQ49_10120 PF01783 Ribosomal L32p protein family KBQ49_10125 PF02620 Large ribosomal RNA subunit accumulation protein YceD KBQ49_10130 PF02545 Maf-like protein KBQ49_10150 PF07726 ATPase family associated with various cellular activities (AAA) KBQ49_10150 PF17863 AAA lid domain KBQ49_10160 PF13559 Domain of unknown function (DUF4129) KBQ49_10160 PF11992 Domain of unknown function (DUF3488) KBQ49_10160 PF01841 Transglutaminase-like superfamily KBQ49_10170 PF01230 HIT domain KBQ49_10175 PF02132 RecR protein KBQ49_10175 PF13662 Toprim domain KBQ49_10180 PF02575 YbaB/EbfC DNA-binding family KBQ49_10185 PF12169 DNA polymerase III subunits gamma and tau domain III KBQ49_10185 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding KBQ49_10185 PF12170 DNA polymerase III tau subunit V interacting with alpha KBQ49_10200 PF02391 MoaE protein KBQ49_10205 PF02597 ThiS family KBQ49_10210 PF01967 MoaC family KBQ49_10220 PF06463 Molybdenum Cofactor Synthesis C KBQ49_10220 PF04055 Radical SAM superfamily KBQ49_10225 PF12706 Beta-lactamase superfamily domain KBQ49_10235 PF01075 Glycosyltransferase family 9 (heptosyltransferase) KBQ49_10260 PF00929 Exonuclease KBQ49_10265 PF00075 RNase H KBQ49_10275 PF16123 Hydroxyacylglutathione hydrolase C-terminus KBQ49_10275 PF00753 Metallo-beta-lactamase superfamily KBQ49_10280 PF05257 CHAP domain KBQ49_10280 PF01476 LysM domain KBQ49_10310 PF00216 Bacterial DNA-binding protein KBQ49_10315 PF02190 ATP-dependent protease La (LON) substrate-binding domain KBQ49_10315 PF05362 Lon protease (S16) C-terminal proteolytic domain KBQ49_10315 PF00004 ATPase family associated with various cellular activities (AAA) KBQ49_10320 PF06689 ClpX C4-type zinc finger KBQ49_10320 PF10431 C-terminal, D2-small domain, of ClpB protein KBQ49_10320 PF07724 AAA domain (Cdc48 subfamily) KBQ49_10325 PF00574 Clp protease KBQ49_10330 PF05698 Bacterial trigger factor protein (TF) C-terminus KBQ49_10330 PF05697 Bacterial trigger factor protein (TF) KBQ49_10375 PF18324 Hypothetical protein TT1725 KBQ49_10375 PF00180 Isocitrate/isopropylmalate dehydrogenase KBQ49_10385 PF00462 Glutaredoxin KBQ49_10390 PF01435 Peptidase family M48 KBQ49_10390 PF13181 Tetratricopeptide repeat KBQ49_10395 PF00072 Response regulator receiver domain KBQ49_10395 PF00486 Transcriptional regulatory protein, C terminal KBQ49_10400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KBQ49_10400 PF00512 His Kinase A (phospho-acceptor) domain KBQ49_10400 PF00989 PAS fold KBQ49_10400 PF11808 Phosphate regulon sensor protein PhoR KBQ49_10405 PF17941 Polyphosphate kinase C-terminal domain 1 KBQ49_10405 PF02503 Polyphosphate kinase middle domain KBQ49_10405 PF13089 Polyphosphate kinase N-terminal domain KBQ49_10405 PF13090 Polyphosphate kinase C-terminal domain 2 KBQ49_10410 PF02541 Ppx/GppA phosphatase family KBQ49_10415 PF00534 Glycosyl transferases group 1 KBQ49_10415 PF13439 Glycosyltransferase Family 4 KBQ49_10420 PF01569 PAP2 superfamily KBQ49_10425 PF00149 Calcineurin-like phosphoesterase KBQ49_10445 PF00156 Phosphoribosyl transferase domain KBQ49_10460 PF02875 Mur ligase family, glutamate ligase domain KBQ49_10460 PF08245 Mur ligase middle domain KBQ49_10465 PF00300 Histidine phosphatase superfamily (branch 1) KBQ49_10470 PF10459 Peptidase S46 KBQ49_10475 PF08240 Alcohol dehydrogenase GroES-like domain KBQ49_10475 PF00107 Zinc-binding dehydrogenase KBQ49_10485 PF00005 ABC transporter KBQ49_10485 PF17850 CysA C-terminal regulatory domain KBQ49_10485 PF12857 TOBE-like domain KBQ49_10490 PF00528 Binding-protein-dependent transport system inner membrane component KBQ49_10495 PF00528 Binding-protein-dependent transport system inner membrane component KBQ49_10505 PF00155 Aminotransferase class I and II KBQ49_10510 PF00849 RNA pseudouridylate synthase KBQ49_10525 PF00223 Photosystem I psaA/psaB protein KBQ49_10525 PF00691 OmpA family KBQ49_10545 PF00248 Aldo/keto reductase family KBQ49_10560 PF07992 Pyridine nucleotide-disulphide oxidoreductase KBQ49_10560 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KBQ49_10585 PF03009 Glycerophosphoryl diester phosphodiesterase family KBQ49_10605 PF02798 Glutathione S-transferase, N-terminal domain KBQ49_10605 PF00043 Glutathione S-transferase, C-terminal domain KBQ49_10610 PF00501 AMP-binding enzyme KBQ49_10610 PF13193 AMP-binding enzyme C-terminal domain KBQ49_10610 PF16177 Acetyl-coenzyme A synthetase N-terminus KBQ49_10620 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KBQ49_10620 PF00056 lactate/malate dehydrogenase, NAD binding domain KBQ49_10630 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KBQ49_10635 PF00009 Elongation factor Tu GTP binding domain KBQ49_10635 PF00679 Elongation factor G C-terminus KBQ49_10635 PF03144 Elongation factor Tu domain 2 KBQ49_10650 PF01474 Class-II DAHP synthetase family KBQ49_10660 PF02600 Disulfide bond formation protein DsbB KBQ49_10665 PF01196 Ribosomal protein L17 KBQ49_10670 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KBQ49_10670 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KBQ49_10670 PF01000 RNA polymerase Rpb3/RpoA insert domain KBQ49_10675 PF00163 Ribosomal protein S4/S9 N-terminal domain KBQ49_10675 PF01479 S4 domain KBQ49_10680 PF00411 Ribosomal protein S11 KBQ49_10685 PF00416 Ribosomal protein S13/S18 KBQ49_10690 PF00344 SecY translocase KBQ49_10695 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KBQ49_10700 PF00327 Ribosomal protein L30p/L7e KBQ49_10705 PF03719 Ribosomal protein S5, C-terminal domain KBQ49_10705 PF00333 Ribosomal protein S5, N-terminal domain KBQ49_10710 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast KBQ49_10715 PF00347 Ribosomal protein L6 KBQ49_10720 PF00410 Ribosomal protein S8 KBQ49_10725 PF00253 Ribosomal protein S14p/S29e KBQ49_10730 PF00673 ribosomal L5P family C-terminus KBQ49_10730 PF00281 Ribosomal protein L5 KBQ49_10735 PF00467 KOW motif KBQ49_10735 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KBQ49_10740 PF00238 Ribosomal protein L14p/L23e KBQ49_10745 PF00366 Ribosomal protein S17 KBQ49_10750 PF00831 Ribosomal L29 protein KBQ49_10755 PF00252 Ribosomal protein L16p/L10e KBQ49_10760 PF00189 Ribosomal protein S3, C-terminal domain KBQ49_10760 PF07650 KH domain KBQ49_10765 PF00237 Ribosomal protein L22p/L17e KBQ49_10770 PF00203 Ribosomal protein S19 KBQ49_10775 PF00181 Ribosomal Proteins L2, RNA binding domain KBQ49_10775 PF03947 Ribosomal Proteins L2, C-terminal domain KBQ49_10780 PF00276 Ribosomal protein L23 KBQ49_10785 PF00573 Ribosomal protein L4/L1 family KBQ49_10790 PF00297 Ribosomal protein L3 KBQ49_10795 PF00338 Ribosomal protein S10p/S20e KBQ49_10800 PF03144 Elongation factor Tu domain 2 KBQ49_10800 PF03143 Elongation factor Tu C-terminal domain KBQ49_10800 PF00009 Elongation factor Tu GTP binding domain KBQ49_10805 PF00679 Elongation factor G C-terminus KBQ49_10805 PF14492 Elongation Factor G, domain II KBQ49_10805 PF00009 Elongation factor Tu GTP binding domain KBQ49_10805 PF03764 Elongation factor G, domain IV KBQ49_10805 PF03144 Elongation factor Tu domain 2 KBQ49_10810 PF00177 Ribosomal protein S7p/S5e KBQ49_10815 PF00164 Ribosomal protein S12/S23 KBQ49_10820 PF04983 RNA polymerase Rpb1, domain 3 KBQ49_10820 PF04998 RNA polymerase Rpb1, domain 5 KBQ49_10820 PF05000 RNA polymerase Rpb1, domain 4 KBQ49_10820 PF00623 RNA polymerase Rpb1, domain 2 KBQ49_10820 PF04997 RNA polymerase Rpb1, domain 1 KBQ49_10830 PF00542 Ribosomal protein L7/L12 C-terminal domain KBQ49_10830 PF16320 Ribosomal protein L7/L12 dimerisation domain KBQ49_10835 PF00466 Ribosomal protein L10 KBQ49_10840 PF00687 Ribosomal protein L1p/L10e family KBQ49_10845 PF00298 Ribosomal protein L11, RNA binding domain KBQ49_10845 PF03946 Ribosomal protein L11, N-terminal domain KBQ49_10850 PF00467 KOW motif KBQ49_10850 PF02357 Transcription termination factor nusG KBQ49_10855 PF00584 SecE/Sec61-gamma subunits of protein translocation complex KBQ49_10865 PF03144 Elongation factor Tu domain 2 KBQ49_10865 PF03143 Elongation factor Tu C-terminal domain KBQ49_10865 PF00009 Elongation factor Tu GTP binding domain KBQ49_10885 PF01926 50S ribosome-binding GTPase KBQ49_10885 PF06071 Protein of unknown function (DUF933) KBQ49_10890 PF01195 Peptidyl-tRNA hydrolase KBQ49_10895 PF14693 Ribosomal protein TL5, C-terminal domain KBQ49_10895 PF01386 Ribosomal L25p family KBQ49_10900 PF14572 Phosphoribosyl synthetase-associated domain KBQ49_10900 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KBQ49_10910 PF00288 GHMP kinases N terminal domain KBQ49_10910 PF08544 GHMP kinases C terminal KBQ49_10915 PF03550 Outer membrane lipoprotein LolB KBQ49_10925 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain KBQ49_10925 PF01488 Shikimate / quinate 5-dehydrogenase KBQ49_10925 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain KBQ49_10930 PF03462 PCRF domain KBQ49_10930 PF00472 RF-1 domain KBQ49_10950 PF04185 Phosphoesterase family KBQ49_10950 PF05506 Domain of unknown function (DUF756) KBQ49_10965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KBQ49_10965 PF03466 LysR substrate binding domain KBQ49_10970 PF00005 ABC transporter KBQ49_10970 PF12848 ABC transporter KBQ49_10975 PF07715 TonB-dependent Receptor Plug Domain KBQ49_10975 PF00593 TonB dependent receptor KBQ49_10980 PF07715 TonB-dependent Receptor Plug Domain KBQ49_10980 PF00593 TonB dependent receptor KBQ49_10995 PF05598 Transposase domain (DUF772) KBQ49_11000 PF02534 Type IV secretory system Conjugative DNA transfer KBQ49_11040 PF07715 TonB-dependent Receptor Plug Domain KBQ49_11040 PF00593 TonB dependent receptor KBQ49_11055 PF02254 TrkA-N domain KBQ49_11055 PF00999 Sodium/hydrogen exchanger family KBQ49_11065 PF07660 Secretin and TonB N terminus short domain KBQ49_11065 PF00593 TonB dependent receptor KBQ49_11065 PF07715 TonB-dependent Receptor Plug Domain KBQ49_11075 PF06276 Ferric iron reductase FhuF-like transporter KBQ49_11075 PF04183 IucA / IucC family KBQ49_11080 PF07690 Major Facilitator Superfamily KBQ49_11085 PF06276 Ferric iron reductase FhuF-like transporter KBQ49_11085 PF04183 IucA / IucC family KBQ49_11090 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KBQ49_11090 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KBQ49_11100 PF01053 Cys/Met metabolism PLP-dependent enzyme KBQ49_11115 PF00004 ATPase family associated with various cellular activities (AAA) KBQ49_11115 PF07724 AAA domain (Cdc48 subfamily) KBQ49_11115 PF17871 AAA lid domain KBQ49_11115 PF02861 Clp amino terminal domain, pathogenicity island component KBQ49_11115 PF10431 C-terminal, D2-small domain, of ClpB protein KBQ49_11150 PF07715 TonB-dependent Receptor Plug Domain KBQ49_11150 PF00593 TonB dependent receptor KBQ49_11160 PF02358 Trehalose-phosphatase KBQ49_11165 PF00723 Glycosyl hydrolases family 15 KBQ49_11170 PF00982 Glycosyltransferase family 20 KBQ49_11175 PF01011 PQQ enzyme repeat KBQ49_11185 PF02578 Multi-copper polyphenol oxidoreductase laccase KBQ49_11190 PF00849 RNA pseudouridylate synthase KBQ49_11195 PF13525 Outer membrane lipoprotein KBQ49_11205 PF00005 ABC transporter KBQ49_11210 PF00528 Binding-protein-dependent transport system inner membrane component KBQ49_11220 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KBQ49_11225 PF12867 DinB superfamily KBQ49_11225 PF03781 Sulfatase-modifying factor enzyme 1 KBQ49_11235 PF00795 Carbon-nitrogen hydrolase KBQ49_11235 PF02540 NAD synthase KBQ49_11250 PF02629 CoA binding domain KBQ49_11250 PF00549 CoA-ligase KBQ49_11255 PF08442 ATP-grasp domain KBQ49_11255 PF00549 CoA-ligase KBQ49_11260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KBQ49_11260 PF00512 His Kinase A (phospho-acceptor) domain KBQ49_11265 PF02954 Bacterial regulatory protein, Fis family KBQ49_11265 PF00072 Response regulator receiver domain KBQ49_11265 PF00158 Sigma-54 interaction domain KBQ49_11275 PF01381 Helix-turn-helix KBQ49_11280 PF00437 Type II/IV secretion system protein KBQ49_11280 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KBQ49_11295 PF07963 Prokaryotic N-terminal methylation motif KBQ49_11295 PF00114 Pilin (bacterial filament) KBQ49_11300 PF00482 Type II secretion system (T2SS), protein F KBQ49_11305 PF06750 Bacterial Peptidase A24 N-terminal domain KBQ49_11305 PF01478 Type IV leader peptidase family KBQ49_11310 PF01121 Dephospho-CoA kinase KBQ49_11315 PF11808 Phosphate regulon sensor protein PhoR KBQ49_11315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KBQ49_11315 PF00512 His Kinase A (phospho-acceptor) domain KBQ49_11315 PF00989 PAS fold KBQ49_11320 PF00072 Response regulator receiver domain KBQ49_11320 PF00486 Transcriptional regulatory protein, C terminal KBQ49_11330 PF08443 RimK-like ATP-grasp domain KBQ49_11330 PF18030 RimK PreATP-grasp domain KBQ49_11335 PF07715 TonB-dependent Receptor Plug Domain KBQ49_11335 PF07660 Secretin and TonB N terminus short domain KBQ49_11335 PF00593 TonB dependent receptor KBQ49_11340 PF05506 Domain of unknown function (DUF756) KBQ49_11340 PF04185 Phosphoesterase family KBQ49_11360 PF00266 Aminotransferase class-V KBQ49_11365 PF01053 Cys/Met metabolism PLP-dependent enzyme KBQ49_11375 PF07722 Peptidase C26 KBQ49_11380 PF01810 LysE type translocator KBQ49_11385 PF04204 Homoserine O-succinyltransferase KBQ49_11390 PF00120 Glutamine synthetase, catalytic domain KBQ49_11415 PF05690 Thiazole biosynthesis protein ThiG KBQ49_11420 PF02390 Putative methyltransferase KBQ49_11425 PF03600 Citrate transporter KBQ49_11425 PF02080 TrkA-C domain KBQ49_11440 PF01557 Fumarylacetoacetate (FAA) hydrolase family KBQ49_11445 PF01741 Large-conductance mechanosensitive channel, MscL KBQ49_11455 PF00356 Bacterial regulatory proteins, lacI family KBQ49_11465 PF00588 SpoU rRNA Methylase family KBQ49_11465 PF08032 RNA 2'-O ribose methyltransferase substrate binding KBQ49_11505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KBQ49_11505 PF00672 HAMP domain KBQ49_11505 PF02203 Tar ligand binding domain homologue KBQ49_11510 PF00009 Elongation factor Tu GTP binding domain KBQ49_11515 PF01507 Phosphoadenosine phosphosulfate reductase family KBQ49_11520 PF00667 FAD binding domain KBQ49_11520 PF00258 Flavodoxin KBQ49_11520 PF00175 Oxidoreductase NAD-binding domain KBQ49_11525 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KBQ49_11525 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KBQ49_11530 PF01507 Phosphoadenosine phosphosulfate reductase family KBQ49_11560 PF03960 ArsC family KBQ49_11575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KBQ49_11575 PF03466 LysR substrate binding domain KBQ49_11580 PF14824 Sirohaem biosynthesis protein central KBQ49_11580 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KBQ49_11580 PF10414 Sirohaem synthase dimerisation region KBQ49_11585 PF00291 Pyridoxal-phosphate dependent enzyme KBQ49_11595 PF00266 Aminotransferase class-V KBQ49_11635 PF01661 Macro domain KBQ49_11640 PF00274 Fructose-bisphosphate aldolase class-I KBQ49_11645 PF02887 Pyruvate kinase, alpha/beta domain KBQ49_11645 PF00224 Pyruvate kinase, barrel domain KBQ49_11650 PF13419 Haloacid dehalogenase-like hydrolase KBQ49_11655 PF00162 Phosphoglycerate kinase KBQ49_11690 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KBQ49_11690 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KBQ49_11695 PF03922 OmpW family KBQ49_11700 PF03922 OmpW family KBQ49_11715 PF01022 Bacterial regulatory protein, arsR family KBQ49_11720 PF00753 Metallo-beta-lactamase superfamily KBQ49_11730 PF00528 Binding-protein-dependent transport system inner membrane component KBQ49_11735 PF03459 TOBE domain KBQ49_11735 PF00005 ABC transporter KBQ49_11760 PF03734 L,D-transpeptidase catalytic domain KBQ49_11760 PF01476 LysM domain KBQ49_11765 PF04225 Opacity-associated protein A LysM-like domain KBQ49_11765 PF01551 Peptidase family M23 KBQ49_11795 PF02779 Transketolase, pyrimidine binding domain KBQ49_11795 PF02780 Transketolase, C-terminal domain KBQ49_11795 PF00456 Transketolase, thiamine diphosphate binding domain KBQ49_11800 PF00375 Sodium:dicarboxylate symporter family KBQ49_11815 PF13519 von Willebrand factor type A domain KBQ49_11825 PF01882 Protein of unknown function DUF58 KBQ49_11830 PF17863 AAA lid domain KBQ49_11830 PF07726 ATPase family associated with various cellular activities (AAA) KBQ49_11835 PF00263 Bacterial type II and III secretion system protein KBQ49_11835 PF07660 Secretin and TonB N terminus short domain KBQ49_11835 PF03958 Bacterial type II/III secretion system short domain KBQ49_11835 PF11741 AMIN domain KBQ49_11840 PF04351 Pilus assembly protein, PilP KBQ49_11845 PF04350 Pilus assembly protein, PilO KBQ49_11855 PF11104 Type IV pilus assembly protein PilM; KBQ49_11860 PF17092 Penicillin-binding protein OB-like domain KBQ49_11860 PF00905 Penicillin binding protein transpeptidase domain KBQ49_11860 PF00912 Transglycosylase KBQ49_11875 PF00285 Citrate synthase, C-terminal domain KBQ49_11880 PF01197 Ribosomal protein L31 KBQ49_11885 PF01156 Inosine-uridine preferring nucleoside hydrolase KBQ49_11890 PF00270 DEAD/DEAH box helicase KBQ49_11890 PF00271 Helicase conserved C-terminal domain KBQ49_11890 PF17191 RecG wedge domain KBQ49_11895 PF01042 Endoribonuclease L-PSP KBQ49_11900 PF02824 TGS domain KBQ49_11900 PF04607 Region found in RelA / SpoT proteins KBQ49_11900 PF13291 ACT domain KBQ49_11905 PF01192 RNA polymerase Rpb6 KBQ49_11910 PF00625 Guanylate kinase KBQ49_11915 PF08340 Domain of unknown function (DUF1732) KBQ49_11915 PF03755 YicC-like family, N-terminal region KBQ49_11920 PF03725 3' exoribonuclease family, domain 2 KBQ49_11920 PF01138 3' exoribonuclease family, domain 1 KBQ49_11925 PF01725 Ham1 family KBQ49_11930 PF06969 HemN C-terminal domain KBQ49_11930 PF04055 Radical SAM superfamily KBQ49_11960 PF00438 S-adenosylmethionine synthetase, N-terminal domain KBQ49_11960 PF02772 S-adenosylmethionine synthetase, central domain KBQ49_11960 PF02773 S-adenosylmethionine synthetase, C-terminal domain KBQ49_11965 PF00328 Histidine phosphatase superfamily (branch 2) KBQ49_11990 PF00311 Phosphoenolpyruvate carboxylase KBQ49_11995 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KBQ49_11995 PF05221 S-adenosyl-L-homocysteine hydrolase KBQ49_12025 PF02219 Methylenetetrahydrofolate reductase KBQ49_12035 PF00293 NUDIX domain KBQ49_12045 PF00005 ABC transporter KBQ49_12045 PF00664 ABC transporter transmembrane region KBQ49_12045 PF03412 Peptidase C39 family KBQ49_12075 PF00529 HlyD membrane-fusion protein of T1SS KBQ49_12075 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KBQ49_12080 PF01043 SecA preprotein cross-linking domain KBQ49_12080 PF07517 SecA DEAD-like domain KBQ49_12080 PF07516 SecA Wing and Scaffold domain KBQ49_12080 PF02810 SEC-C motif KBQ49_12085 PF01476 LysM domain KBQ49_12085 PF08525 Opacity-associated protein A N-terminal motif KBQ49_12085 PF01551 Peptidase family M23 KBQ49_12100 PF12327 FtsZ family, C-terminal domain KBQ49_12100 PF00091 Tubulin/FtsZ family, GTPase domain KBQ49_12105 PF02491 SHS2 domain inserted in FTSA KBQ49_12110 PF03799 Cell division protein FtsQ KBQ49_12110 PF08478 POTRA domain, FtsQ-type KBQ49_12115 PF07478 D-ala D-ala ligase C-terminus KBQ49_12115 PF01820 D-ala D-ala ligase N-terminus KBQ49_12120 PF08245 Mur ligase middle domain KBQ49_12120 PF02875 Mur ligase family, glutamate ligase domain KBQ49_12120 PF01225 Mur ligase family, catalytic domain KBQ49_12125 PF04101 Glycosyltransferase family 28 C-terminal domain KBQ49_12125 PF03033 Glycosyltransferase family 28 N-terminal domain KBQ49_12130 PF01098 Cell cycle protein KBQ49_12135 PF00953 Glycosyl transferase family 4 KBQ49_12140 PF08245 Mur ligase middle domain KBQ49_12140 PF02875 Mur ligase family, glutamate ligase domain KBQ49_12140 PF01225 Mur ligase family, catalytic domain KBQ49_12145 PF01225 Mur ligase family, catalytic domain KBQ49_12145 PF02875 Mur ligase family, glutamate ligase domain KBQ49_12145 PF08245 Mur ligase middle domain KBQ49_12150 PF00905 Penicillin binding protein transpeptidase domain KBQ49_12150 PF03717 Penicillin-binding Protein dimerisation domain KBQ49_12155 PF04999 Cell division protein FtsL KBQ49_12160 PF01795 MraW methylase family KBQ49_12165 PF02381 MraZ protein, putative antitoxin-like KBQ49_12190 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KBQ49_12200 PF02021 Uncharacterised protein family UPF0102 KBQ49_12210 PF01565 FAD binding domain KBQ49_12210 PF02913 FAD linked oxidases, C-terminal domain KBQ49_12215 PF00486 Transcriptional regulatory protein, C terminal KBQ49_12215 PF00072 Response regulator receiver domain KBQ49_12220 PF00512 His Kinase A (phospho-acceptor) domain KBQ49_12220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KBQ49_12220 PF13492 GAF domain KBQ49_12220 PF13493 Domain of unknown function (DUF4118) KBQ49_12220 PF02702 Osmosensitive K+ channel His kinase sensor domain KBQ49_12225 PF02669 K+-transporting ATPase, c chain KBQ49_12235 PF03814 Potassium-transporting ATPase A subunit KBQ49_12265 PF01029 NusB family KBQ49_12270 PF00885 6,7-dimethyl-8-ribityllumazine synthase KBQ49_12280 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KBQ49_12280 PF00925 GTP cyclohydrolase II KBQ49_12285 PF00677 Lumazine binding domain KBQ49_12290 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KBQ49_12290 PF01872 RibD C-terminal domain KBQ49_12300 PF03477 ATP cone domain KBQ49_12305 PF00464 Serine hydroxymethyltransferase KBQ49_12320 PF00005 ABC transporter KBQ49_12320 PF12848 ABC transporter KBQ49_12325 PF01327 Polypeptide deformylase KBQ49_12355 PF13632 Glycosyl transferase family group 2 KBQ49_12355 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KBQ49_12365 PF02350 UDP-N-acetylglucosamine 2-epimerase KBQ49_12370 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KBQ49_12370 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain KBQ49_12405 PF00593 TonB dependent receptor KBQ49_12405 PF07715 TonB-dependent Receptor Plug Domain KBQ49_12415 PF07702 UTRA domain KBQ49_12415 PF00392 Bacterial regulatory proteins, gntR family KBQ49_12425 PF03958 Bacterial type II/III secretion system short domain KBQ49_12425 PF00263 Bacterial type II and III secretion system protein KBQ49_12435 PF10741 Type II secretion system (T2SS), protein M subtype b KBQ49_12440 PF05137 Fimbrial assembly protein (PilN) KBQ49_12445 PF03934 Type II secretion system (T2SS), protein K KBQ49_12455 PF07963 Prokaryotic N-terminal methylation motif KBQ49_12460 PF12019 Type II transport protein GspH KBQ49_12465 PF08334 Type II secretion system (T2SS), protein G KBQ49_12470 PF00482 Type II secretion system (T2SS), protein F KBQ49_12475 PF00437 Type II/IV secretion system protein KBQ49_12475 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KBQ49_12480 PF00082 Subtilase family KBQ49_12480 PF04151 Bacterial pre-peptidase C-terminal domain KBQ49_12485 PF03895 YadA-like membrane anchor domain KBQ49_12485 PF05658 Head domain of trimeric autotransporter adhesin KBQ49_12485 PF05662 Coiled stalk of trimeric autotransporter adhesin KBQ49_12485 PF13018 Extended Signal Peptide of Type V secretion system KBQ49_12495 PF00672 HAMP domain KBQ49_12495 PF02203 Tar ligand binding domain homologue KBQ49_12495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KBQ49_12505 PF10411 Disulfide bond isomerase protein N-terminus KBQ49_12505 PF13098 Thioredoxin-like domain KBQ49_12510 PF02899 Phage integrase, N-terminal SAM-like domain KBQ49_12510 PF00589 Phage integrase family KBQ49_12535 PF00883 Cytosol aminopeptidase family, catalytic domain KBQ49_12535 PF02789 Cytosol aminopeptidase family, N-terminal domain KBQ49_12545 PF10458 Valyl tRNA synthetase tRNA binding arm KBQ49_12545 PF08264 Anticodon-binding domain of tRNA KBQ49_12545 PF00133 tRNA synthetases class I (I, L, M and V) KBQ49_12565 PF01066 CDP-alcohol phosphatidyltransferase KBQ49_12575 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KBQ49_12575 PF03129 Anticodon binding domain KBQ49_12575 PF04073 Aminoacyl-tRNA editing domain KBQ49_12580 PF00816 H-NS histone family KBQ49_12590 PF02405 Permease MlaE KBQ49_12595 PF00005 ABC transporter KBQ49_12600 PF03886 ABC-type transport auxiliary lipoprotein component KBQ49_12600 PF02470 MlaD protein KBQ49_12620 PF14307 Glycosyltransferase WbsX KBQ49_12620 PF05045 Rhamnan synthesis protein F KBQ49_12625 PF01144 Coenzyme A transferase KBQ49_12630 PF01144 Coenzyme A transferase KBQ49_12635 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KBQ49_12635 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KBQ49_12635 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KBQ49_12635 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KBQ49_12640 PF01050 Mannose-6-phosphate isomerase KBQ49_12640 PF00483 Nucleotidyl transferase KBQ49_12645 PF04321 RmlD substrate binding domain KBQ49_12650 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase KBQ49_12655 PF00483 Nucleotidyl transferase KBQ49_12660 PF16363 GDP-mannose 4,6 dehydratase KBQ49_12665 PF01012 Electron transfer flavoprotein domain KBQ49_12670 PF01012 Electron transfer flavoprotein domain KBQ49_12670 PF00766 Electron transfer flavoprotein FAD-binding domain KBQ49_12680 PF01040 UbiA prenyltransferase family KBQ49_12685 PF04030 D-arabinono-1,4-lactone oxidase KBQ49_12685 PF01565 FAD binding domain KBQ49_12690 PF00106 short chain dehydrogenase KBQ49_12695 PF01370 NAD dependent epimerase/dehydratase family KBQ49_12760 PF00535 Glycosyl transferase family 2 KBQ49_12765 PF00535 Glycosyl transferase family 2 KBQ49_12770 PF00398 Ribosomal RNA adenine dimethylase KBQ49_12775 PF00005 ABC transporter KBQ49_12785 PF01053 Cys/Met metabolism PLP-dependent enzyme KBQ49_12790 PF00571 CBS domain KBQ49_12790 PF00291 Pyridoxal-phosphate dependent enzyme KBQ49_12810 PF00437 Type II/IV secretion system protein KBQ49_12815 PF14497 Glutathione S-transferase, C-terminal domain KBQ49_12815 PF02798 Glutathione S-transferase, N-terminal domain KBQ49_12825 PF00270 DEAD/DEAH box helicase KBQ49_12825 PF00271 Helicase conserved C-terminal domain KBQ49_12830 PF01242 6-pyruvoyl tetrahydropterin synthase KBQ49_12845 PF13185 GAF domain KBQ49_12855 PF07715 TonB-dependent Receptor Plug Domain KBQ49_12855 PF00593 TonB dependent receptor KBQ49_12860 PF13419 Haloacid dehalogenase-like hydrolase KBQ49_12865 PF00817 impB/mucB/samB family KBQ49_12865 PF11799 impB/mucB/samB family C-terminal domain KBQ49_12865 PF11798 IMS family HHH motif KBQ49_12870 PF07977 FabA-like domain KBQ49_12875 PF00109 Beta-ketoacyl synthase, N-terminal domain KBQ49_12875 PF02801 Beta-ketoacyl synthase, C-terminal domain KBQ49_12885 PF01432 Peptidase family M3 KBQ49_12890 PF00291 Pyridoxal-phosphate dependent enzyme KBQ49_12900 PF00403 Heavy-metal-associated domain KBQ49_12905 PF00376 MerR family regulatory protein KBQ49_12905 PF09278 MerR, DNA binding KBQ49_12915 PF07732 Multicopper oxidase KBQ49_12915 PF00394 Multicopper oxidase KBQ49_12915 PF07731 Multicopper oxidase KBQ49_12920 PF05275 Copper resistance protein B precursor (CopB) KBQ49_12930 PF01380 SIS domain KBQ49_12935 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KBQ49_12940 PF00005 ABC transporter KBQ49_12945 PF00005 ABC transporter KBQ49_12945 PF02687 FtsX-like permease family KBQ49_12945 PF12704 MacB-like periplasmic core domain KBQ49_12950 PF00005 ABC transporter KBQ49_12950 PF02687 FtsX-like permease family KBQ49_12950 PF12704 MacB-like periplasmic core domain KBQ49_12955 PF00158 Sigma-54 interaction domain KBQ49_12955 PF02954 Bacterial regulatory protein, Fis family KBQ49_12955 PF00072 Response regulator receiver domain KBQ49_12960 PF00512 His Kinase A (phospho-acceptor) domain KBQ49_12960 PF00989 PAS fold KBQ49_12960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KBQ49_12970 PF00132 Bacterial transferase hexapeptide (six repeats) KBQ49_12970 PF14602 Hexapeptide repeat of succinyl-transferase KBQ49_12970 PF12804 MobA-like NTP transferase domain KBQ49_12990 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain KBQ49_12990 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain KBQ49_12995 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KBQ49_12995 PF02874 ATP synthase alpha/beta family, beta-barrel domain KBQ49_13000 PF00231 ATP synthase KBQ49_13005 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KBQ49_13005 PF00306 ATP synthase alpha/beta chain, C terminal domain KBQ49_13005 PF02874 ATP synthase alpha/beta family, beta-barrel domain KBQ49_13010 PF00213 ATP synthase delta (OSCP) subunit KBQ49_13015 PF00430 ATP synthase B/B' CF(0) KBQ49_13020 PF00137 ATP synthase subunit C KBQ49_13025 PF00119 ATP synthase A chain KBQ49_13040 PF07992 Pyridine nucleotide-disulphide oxidoreductase KBQ49_13040 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KBQ49_13045 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KBQ49_13045 PF00364 Biotin-requiring enzyme KBQ49_13045 PF02817 e3 binding domain KBQ49_13070 PF03180 NLPA lipoprotein KBQ49_13075 PF00528 Binding-protein-dependent transport system inner membrane component KBQ49_13080 PF00005 ABC transporter KBQ49_13080 PF09383 NIL domain KBQ49_13085 PF00892 EamA-like transporter family KBQ49_13090 PF04461 Protein of unknown function (DUF520) KBQ49_13100 PF00849 RNA pseudouridylate synthase KBQ49_13100 PF01479 S4 domain KBQ49_13125 PF00512 His Kinase A (phospho-acceptor) domain KBQ49_13125 PF00497 Bacterial extracellular solute-binding proteins, family 3 KBQ49_13125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KBQ49_13125 PF01627 Hpt domain KBQ49_13125 PF00072 Response regulator receiver domain KBQ49_13125 PF00989 PAS fold KBQ49_13145 PF00842 Alanine racemase, C-terminal domain KBQ49_13145 PF01168 Alanine racemase, N-terminal domain KBQ49_13150 PF01266 FAD dependent oxidoreductase KBQ49_13155 PF01037 Lrp/AsnC ligand binding domain KBQ49_13170 PF01641 SelR domain KBQ49_13175 PF01618 MotA/TolQ/ExbB proton channel family KBQ49_13180 PF13677 Membrane MotB of proton-channel complex MotA/MotB KBQ49_13180 PF00691 OmpA family KBQ49_13210 PF01061 ABC-2 type transporter KBQ49_13215 PF00005 ABC transporter KBQ49_13220 PF00999 Sodium/hydrogen exchanger family KBQ49_13225 PF05711 Macrocin-O-methyltransferase (TylF) KBQ49_13230 PF02469 Fasciclin domain KBQ49_13235 PF03167 Uracil DNA glycosylase superfamily KBQ49_13250 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase KBQ49_13255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KBQ49_13255 PF03466 LysR substrate binding domain KBQ49_13260 PF03358 NADPH-dependent FMN reductase KBQ49_13285 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KBQ49_13285 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KBQ49_13290 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family KBQ49_13310 PF17151 Periplasmic sensor domain KBQ49_13310 PF00990 Diguanylate cyclase, GGDEF domain KBQ49_13315 PF00355 Rieske [2Fe-2S] domain KBQ49_13320 PF00990 Diguanylate cyclase, GGDEF domain KBQ49_13320 PF08448 PAS fold KBQ49_13320 PF08447 PAS fold KBQ49_13320 PF00563 EAL domain KBQ49_13340 PF08889 WbqC-like protein family KBQ49_13345 PF00535 Glycosyl transferase family 2 KBQ49_13350 PF13649 Methyltransferase domain KBQ49_13360 PF00892 EamA-like transporter family KBQ49_13385 PF07715 TonB-dependent Receptor Plug Domain KBQ49_13385 PF00593 TonB dependent receptor KBQ49_13395 PF04397 LytTr DNA-binding domain KBQ49_13395 PF00072 Response regulator receiver domain KBQ49_13400 PF06580 Histidine kinase KBQ49_13400 PF07694 5TMR of 5TMR-LYT KBQ49_13405 PF04199 Putative cyclase KBQ49_13425 PF13520 Amino acid permease KBQ49_13435 PF00553 Cellulose binding domain KBQ49_13435 PF00150 Cellulase (glycosyl hydrolase family 5) KBQ49_13445 PF01204 Trehalase KBQ49_13450 PF01464 Transglycosylase SLT domain KBQ49_13460 PF00497 Bacterial extracellular solute-binding proteins, family 3 KBQ49_13465 PF06719 AraC-type transcriptional regulator N-terminus KBQ49_13465 PF12833 Helix-turn-helix domain KBQ49_13475 PF01544 CorA-like Mg2+ transporter protein KBQ49_13480 PF00324 Amino acid permease KBQ49_13485 PF00892 EamA-like transporter family KBQ49_13500 PF07759 Protein of unknown function (DUF1615) KBQ49_13505 PF02449 Beta-galactosidase KBQ49_13505 PF08533 Beta-galactosidase C-terminal domain KBQ49_13505 PF08532 Beta-galactosidase trimerisation domain KBQ49_13510 PF00561 alpha/beta hydrolase fold KBQ49_13610 PF05598 Transposase domain (DUF772) KBQ49_13645 PF00145 C-5 cytosine-specific DNA methylase KBQ49_13650 PF00145 C-5 cytosine-specific DNA methylase KBQ49_13655 PF17831 Pyruvate dehydrogenase E1 component middle domain KBQ49_13655 PF00456 Transketolase, thiamine diphosphate binding domain KBQ49_13660 PF00672 HAMP domain KBQ49_13660 PF02743 Cache domain KBQ49_13660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KBQ49_13675 PF04264 YceI-like domain KBQ49_13680 PF00881 Nitroreductase family KBQ49_13700 PF03009 Glycerophosphoryl diester phosphodiesterase family KBQ49_13715 PF08335 GlnD PII-uridylyltransferase KBQ49_13715 PF03710 Glutamate-ammonia ligase adenylyltransferase KBQ49_13725 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain KBQ49_13725 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain KBQ49_13730 PF01541 GIY-YIG catalytic domain KBQ49_13735 PF00793 DAHP synthetase I family KBQ49_13740 PF00118 TCP-1/cpn60 chaperonin family KBQ49_13745 PF00166 Chaperonin 10 Kd subunit KBQ49_13755 PF03091 CutA1 divalent ion tolerance protein KBQ49_13760 PF02683 Cytochrome C biogenesis protein transmembrane region KBQ49_13760 PF11412 Disulphide bond corrector protein DsbC KBQ49_13765 PF00578 AhpC/TSA family KBQ49_13775 PF01220 Dehydroquinase class II KBQ49_13780 PF00364 Biotin-requiring enzyme KBQ49_13785 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KBQ49_13785 PF02785 Biotin carboxylase C-terminal domain KBQ49_13785 PF00289 Biotin carboxylase, N-terminal domain KBQ49_13810 PF01381 Helix-turn-helix KBQ49_13820 PF02954 Bacterial regulatory protein, Fis family KBQ49_13845 PF12146 Serine aminopeptidase, S33 KBQ49_13845 PF12147 Putative methyltransferase KBQ49_13850 PF01066 CDP-alcohol phosphatidyltransferase KBQ49_13855 PF01808 AICARFT/IMPCHase bienzyme KBQ49_13855 PF02142 MGS-like domain KBQ49_13860 PF02843 Phosphoribosylglycinamide synthetase, C domain KBQ49_13860 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KBQ49_13860 PF02844 Phosphoribosylglycinamide synthetase, N domain KBQ49_13865 PF12805 FUSC-like inner membrane protein yccS KBQ49_13870 PF07690 Major Facilitator Superfamily KBQ49_13875 PF03466 LysR substrate binding domain KBQ49_13875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KBQ49_13910 PF00293 NUDIX domain KBQ49_13910 PF09297 NADH pyrophosphatase zinc ribbon domain KBQ49_13910 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain KBQ49_13915 PF01521 Iron-sulphur cluster biosynthesis KBQ49_13935 PF00563 EAL domain KBQ49_13935 PF00072 Response regulator receiver domain KBQ49_13935 PF00990 Diguanylate cyclase, GGDEF domain KBQ49_13940 PF00672 HAMP domain KBQ49_13940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KBQ49_13940 PF00512 His Kinase A (phospho-acceptor) domain KBQ49_13940 PF01627 Hpt domain KBQ49_13940 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KBQ49_13940 PF00072 Response regulator receiver domain KBQ49_13945 PF00210 Ferritin-like domain KBQ49_13950 PF04324 BFD-like [2Fe-2S] binding domain KBQ49_13955 PF00293 NUDIX domain KBQ49_13970 PF00380 Ribosomal protein S9/S16 KBQ49_13975 PF00572 Ribosomal protein L13 KBQ49_13980 PF03232 Ubiquinone biosynthesis protein COQ7 KBQ49_13990 PF00893 Small Multidrug Resistance protein KBQ49_13995 PF02675 S-adenosylmethionine decarboxylase KBQ49_14000 PF00325 Bacterial regulatory proteins, crp family KBQ49_14000 PF00027 Cyclic nucleotide-binding domain KBQ49_14005 PF01925 Sulfite exporter TauE/SafE KBQ49_14015 PF00218 Indole-3-glycerol phosphate synthase KBQ49_14020 PF00591 Glycosyl transferase family, a/b domain KBQ49_14020 PF02885 Glycosyl transferase family, helical bundle domain KBQ49_14025 PF00117 Glutamine amidotransferase class-I KBQ49_14030 PF01212 Beta-eliminating lyase KBQ49_14035 PF04715 Anthranilate synthase component I, N terminal region KBQ49_14035 PF00425 chorismate binding enzyme KBQ49_14040 PF00781 Diacylglycerol kinase catalytic domain KBQ49_14045 PF00583 Acetyltransferase (GNAT) family KBQ49_14050 PF00834 Ribulose-phosphate 3 epimerase family KBQ49_14055 PF00226 DnaJ domain KBQ49_14055 PF05099 Tellurite resistance protein TerB KBQ49_14060 PF01259 SAICAR synthetase KBQ49_14070 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family KBQ49_14075 PF13244 Domain of unknown function (DUF4040) KBQ49_14075 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter KBQ49_14075 PF00361 Proton-conducting membrane transporter KBQ49_14075 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KBQ49_14080 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KBQ49_14085 PF00361 Proton-conducting membrane transporter KBQ49_14090 PF01899 Na+/H+ ion antiporter subunit KBQ49_14095 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) KBQ49_14100 PF03334 Na+/H+ antiporter subunit KBQ49_14105 PF01699 Sodium/calcium exchanger protein KBQ49_14120 PF04209 homogentisate 1,2-dioxygenase KBQ49_14125 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KBQ49_14140 PF00854 POT family KBQ49_14145 PF03301 Tryptophan 2,3-dioxygenase KBQ49_14160 PF00676 Dehydrogenase E1 component KBQ49_14175 PF02817 e3 binding domain KBQ49_14175 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KBQ49_14175 PF00364 Biotin-requiring enzyme KBQ49_14185 PF03413 Peptidase propeptide and YPEB domain KBQ49_14185 PF07504 Fungalysin/Thermolysin Propeptide Motif KBQ49_14185 PF01447 Thermolysin metallopeptidase, catalytic domain KBQ49_14185 PF04151 Bacterial pre-peptidase C-terminal domain KBQ49_14185 PF02868 Thermolysin metallopeptidase, alpha-helical domain KBQ49_14190 PF00271 Helicase conserved C-terminal domain KBQ49_14190 PF00270 DEAD/DEAH box helicase KBQ49_14215 PF00294 pfkB family carbohydrate kinase KBQ49_14220 PF00990 Diguanylate cyclase, GGDEF domain KBQ49_14225 PF05661 Protein of unknown function (DUF808) KBQ49_14230 PF02733 Dak1 domain KBQ49_14230 PF02734 DAK2 domain KBQ49_14240 PF03109 ABC1 family KBQ49_14245 PF12795 Mechanosensitive ion channel porin domain KBQ49_14245 PF12794 Mechanosensitive ion channel inner membrane domain 1 KBQ49_14245 PF00924 Mechanosensitive ion channel KBQ49_14250 PF00550 Phosphopantetheine attachment site KBQ49_14250 PF14765 Polyketide synthase dehydratase KBQ49_14250 PF08659 KR domain KBQ49_14250 PF00109 Beta-ketoacyl synthase, N-terminal domain KBQ49_14250 PF02801 Beta-ketoacyl synthase, C-terminal domain KBQ49_14250 PF00107 Zinc-binding dehydrogenase KBQ49_14250 PF08240 Alcohol dehydrogenase GroES-like domain KBQ49_14250 PF00698 Acyl transferase domain KBQ49_14250 PF16197 Ketoacyl-synthetase C-terminal extension KBQ49_14270 PF04542 Sigma-70 region 2 KBQ49_14270 PF08281 Sigma-70, region 4 KBQ49_14270 PF12680 SnoaL-like domain KBQ49_14275 PF02678 Pirin KBQ49_14275 PF05726 Pirin C-terminal cupin domain KBQ49_14285 PF00392 Bacterial regulatory proteins, gntR family KBQ49_14285 PF07729 FCD domain KBQ49_14300 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase KBQ49_14315 PF01039 Carboxyl transferase domain KBQ49_14325 PF16957 Malonate decarboxylase, alpha subunit, transporter KBQ49_14330 PF09339 IclR helix-turn-helix domain KBQ49_14330 PF01614 Bacterial transcriptional regulator KBQ49_14335 PF07690 Major Facilitator Superfamily KBQ49_14340 PF05336 L-rhamnose mutarotase KBQ49_14350 PF13378 Enolase C-terminal domain-like KBQ49_14350 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KBQ49_14355 PF01557 Fumarylacetoacetate (FAA) hydrolase family KBQ49_14370 PF00248 Aldo/keto reductase family KBQ49_14375 PF13419 Haloacid dehalogenase-like hydrolase KBQ49_14385 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KBQ49_14385 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KBQ49_14390 PF00230 Major intrinsic protein KBQ49_14395 PF16901 C-terminal domain of alpha-glycerophosphate oxidase KBQ49_14395 PF01266 FAD dependent oxidoreductase KBQ49_14400 PF00455 DeoR C terminal sensor domain KBQ49_14400 PF08220 DeoR-like helix-turn-helix domain KBQ49_14405 PF07308 Protein of unknown function (DUF1456) KBQ49_14425 PF07715 TonB-dependent Receptor Plug Domain KBQ49_14425 PF00593 TonB dependent receptor KBQ49_14440 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region KBQ49_14440 PF00326 Prolyl oligopeptidase family KBQ49_14455 PF00593 TonB dependent receptor KBQ49_14455 PF07715 TonB-dependent Receptor Plug Domain KBQ49_14520 PF00595 PDZ domain KBQ49_14520 PF13180 PDZ domain KBQ49_14540 PF01594 AI-2E family transporter KBQ49_14545 PF13419 Haloacid dehalogenase-like hydrolase KBQ49_14550 PF02789 Cytosol aminopeptidase family, N-terminal domain KBQ49_14550 PF00883 Cytosol aminopeptidase family, catalytic domain KBQ49_14555 PF00199 Catalase KBQ49_14580 PF00005 ABC transporter KBQ49_14585 PF02687 FtsX-like permease family KBQ49_14585 PF12704 MacB-like periplasmic core domain KBQ49_14595 PF00561 alpha/beta hydrolase fold KBQ49_14600 PF00892 EamA-like transporter family KBQ49_14605 PF00892 EamA-like transporter family KBQ49_14615 PF00753 Metallo-beta-lactamase superfamily KBQ49_14620 PF00579 tRNA synthetases class I (W and Y) KBQ49_14640 PF00491 Arginase family KBQ49_14655 PF03309 Type III pantothenate kinase KBQ49_14660 PF02237 Biotin protein ligase C terminal domain KBQ49_14660 PF03099 Biotin/lipoate A/B protein ligase family KBQ49_14670 PF06167 Glucose-regulated metallo-peptidase M90 KBQ49_14685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KBQ49_14690 PF00486 Transcriptional regulatory protein, C terminal KBQ49_14690 PF00072 Response regulator receiver domain KBQ49_14700 PF01207 Dihydrouridine synthase (Dus) KBQ49_14705 PF01717 Cobalamin-independent synthase, Catalytic domain KBQ49_14705 PF08267 Cobalamin-independent synthase, N-terminal domain KBQ49_14715 PF00551 Formyl transferase KBQ49_14725 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KBQ49_14725 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KBQ49_14730 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KBQ49_14735 PF02146 Sir2 family KBQ49_14740 PF07690 Major Facilitator Superfamily KBQ49_14745 PF03466 LysR substrate binding domain KBQ49_14745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KBQ49_14760 PF00268 Ribonucleotide reductase, small chain KBQ49_14765 PF03477 ATP cone domain KBQ49_14765 PF02867 Ribonucleotide reductase, barrel domain KBQ49_14765 PF00317 Ribonucleotide reductase, all-alpha domain KBQ49_14775 PF02566 OsmC-like protein KBQ49_14780 PF01047 MarR family KBQ49_14785 PF03969 AFG1-like ATPase KBQ49_14800 PF02492 CobW/HypB/UreG, nucleotide-binding domain KBQ49_14800 PF07683 Cobalamin synthesis protein cobW C-terminal domain KBQ49_14810 PF02694 Uncharacterised BCR, YnfA/UPF0060 family KBQ49_14820 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KBQ49_14830 PF02770 Acyl-CoA dehydrogenase, middle domain KBQ49_14830 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KBQ49_14830 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KBQ49_14835 PF01039 Carboxyl transferase domain KBQ49_14845 PF02785 Biotin carboxylase C-terminal domain KBQ49_14845 PF00289 Biotin carboxylase, N-terminal domain KBQ49_14845 PF00364 Biotin-requiring enzyme KBQ49_14845 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KBQ49_14855 PF00313 'Cold-shock' DNA-binding domain KBQ49_14865 PF13607 Succinyl-CoA ligase like flavodoxin domain KBQ49_14865 PF13380 CoA binding domain KBQ49_14865 PF00583 Acetyltransferase (GNAT) family KBQ49_14870 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain KBQ49_14870 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain KBQ49_14875 PF00723 Glycosyl hydrolases family 15 KBQ49_14880 PF00072 Response regulator receiver domain KBQ49_14880 PF00486 Transcriptional regulatory protein, C terminal KBQ49_14885 PF00072 Response regulator receiver domain KBQ49_14885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KBQ49_14885 PF13188 PAS domain KBQ49_14885 PF00512 His Kinase A (phospho-acceptor) domain KBQ49_14885 PF08448 PAS fold KBQ49_14890 PF05662 Coiled stalk of trimeric autotransporter adhesin KBQ49_14890 PF05658 Head domain of trimeric autotransporter adhesin KBQ49_14890 PF13018 Extended Signal Peptide of Type V secretion system KBQ49_14890 PF03895 YadA-like membrane anchor domain KBQ49_14895 PF04151 Bacterial pre-peptidase C-terminal domain KBQ49_14895 PF00082 Subtilase family KBQ49_14905 PF05166 YcgL domain KBQ49_14910 PF02801 Beta-ketoacyl synthase, C-terminal domain KBQ49_14910 PF00109 Beta-ketoacyl synthase, N-terminal domain KBQ49_14920 PF00535 Glycosyl transferase family 2 KBQ49_14925 PF01494 FAD binding domain KBQ49_14930 PF00106 short chain dehydrogenase KBQ49_14955 PF07977 FabA-like domain KBQ49_14970 PF00550 Phosphopantetheine attachment site KBQ49_14975 PF04820 Tryptophan halogenase KBQ49_14995 PF02322 Cytochrome bd terminal oxidase subunit II KBQ49_15000 PF01654 Cytochrome bd terminal oxidase subunit I KBQ49_15020 PF01218 Coproporphyrinogen III oxidase KBQ49_15030 PF04239 Protein of unknown function (DUF421) KBQ49_15035 PF01367 5'-3' exonuclease, C-terminal SAM fold KBQ49_15035 PF00476 DNA polymerase family A KBQ49_15035 PF01612 3'-5' exonuclease KBQ49_15035 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KBQ49_15050 PF00582 Universal stress protein family KBQ49_15055 PF12464 Maltose acetyltransferase KBQ49_15055 PF14602 Hexapeptide repeat of succinyl-transferase KBQ49_15075 PF00580 UvrD/REP helicase N-terminal domain KBQ49_15075 PF13361 UvrD-like helicase C-terminal domain KBQ49_15085 PF13091 PLD-like domain KBQ49_15085 PF13396 Phospholipase_D-nuclease N-terminal KBQ49_15090 PF00471 Ribosomal protein L33 KBQ49_15095 PF00830 Ribosomal L28 family KBQ49_15125 PF00535 Glycosyl transferase family 2 KBQ49_15130 PF01370 NAD dependent epimerase/dehydratase family KBQ49_15135 PF17762 HTH domain found in ParB protein KBQ49_15135 PF02195 ParB-like nuclease domain KBQ49_15140 PF13614 AAA domain KBQ49_15145 PF02527 rRNA small subunit methyltransferase G KBQ49_15150 PF01648 4'-phosphopantetheinyl transferase superfamily KBQ49_15155 PF04226 Transglycosylase associated protein KBQ49_15170 PF00171 Aldehyde dehydrogenase family KBQ49_15175 PF07690 Major Facilitator Superfamily KBQ49_15185 PF16177 Acetyl-coenzyme A synthetase N-terminus KBQ49_15185 PF00501 AMP-binding enzyme KBQ49_15185 PF13193 AMP-binding enzyme C-terminal domain KBQ49_15190 PF00196 Bacterial regulatory proteins, luxR family KBQ49_15190 PF00072 Response regulator receiver domain KBQ49_15195 PF02659 Putative manganese efflux pump KBQ49_15200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KBQ49_15200 PF00512 His Kinase A (phospho-acceptor) domain KBQ49_15210 PF00004 ATPase family associated with various cellular activities (AAA) KBQ49_15210 PF17862 AAA+ lid domain KBQ49_15210 PF01434 Peptidase family M41 KBQ49_15215 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain KBQ49_15215 PF06165 Glycosyltransferase family 36 KBQ49_15240 PF04357 TamB, inner membrane protein subunit of TAM complex KBQ49_15245 PF01103 Surface antigen KBQ49_15245 PF07244 Surface antigen variable number repeat KBQ49_15245 PF17243 POTRA domain TamA domain 1 KBQ49_15265 PF04337 Protein of unknown function, DUF480 KBQ49_15280 PF04829 Pre-toxin domain with VENN motif KBQ49_15280 PF05860 haemagglutination activity domain KBQ49_15280 PF13332 Hemagglutinin repeat KBQ49_15280 PF13332 Hemagglutinin repeat KBQ49_15280 PF04829 Pre-toxin domain with VENN motif KBQ49_15280 PF05860 haemagglutination activity domain KBQ49_15285 PF08479 POTRA domain, ShlB-type KBQ49_15285 PF17287 POTRA domain KBQ49_15285 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB KBQ49_15295 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KBQ49_15300 PF04820 Tryptophan halogenase KBQ49_15310 PF00356 Bacterial regulatory proteins, lacI family KBQ49_15320 PF01553 Acyltransferase KBQ49_15340 PF04616 Glycosyl hydrolases family 43 KBQ49_15360 PF00553 Cellulose binding domain KBQ49_15360 PF03422 Carbohydrate binding module (family 6) KBQ49_15360 PF00331 Glycosyl hydrolase family 10 KBQ49_15365 PF02614 Glucuronate isomerase KBQ49_15370 PF00331 Glycosyl hydrolase family 10 KBQ49_15385 PF04244 Deoxyribodipyrimidine photo-lyase-related protein KBQ49_15400 PF08125 Mannitol dehydrogenase C-terminal domain KBQ49_15400 PF01232 Mannitol dehydrogenase Rossmann domain KBQ49_15405 PF00933 Glycosyl hydrolase family 3 N terminal domain KBQ49_15405 PF01915 Glycosyl hydrolase family 3 C-terminal domain KBQ49_15405 PF07691 PA14 domain KBQ49_15405 PF14310 Fibronectin type III-like domain KBQ49_15410 PF04616 Glycosyl hydrolases family 43 KBQ49_15410 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain KBQ49_15415 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KBQ49_15415 PF13378 Enolase C-terminal domain-like KBQ49_15425 PF03648 Glycosyl hydrolase family 67 N-terminus KBQ49_15425 PF07488 Glycosyl hydrolase family 67 middle domain KBQ49_15425 PF07477 Glycosyl hydrolase family 67 C-terminus KBQ49_15430 PF00356 Bacterial regulatory proteins, lacI family KBQ49_15440 PF01171 PP-loop family KBQ49_15445 PF04381 Putative exonuclease, RdgC KBQ49_15455 PF12697 Alpha/beta hydrolase family KBQ49_15460 PF00762 Ferrochelatase KBQ49_15470 PF02416 mttA/Hcf106 family KBQ49_15475 PF02416 mttA/Hcf106 family KBQ49_15480 PF00902 Sec-independent protein translocase protein (TatC) KBQ49_15490 PF00117 Glutamine amidotransferase class-I KBQ49_15490 PF00958 GMP synthase C terminal domain KBQ49_15495 PF00437 Type II/IV secretion system protein KBQ49_15495 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KBQ49_15500 PF02091 Glycyl-tRNA synthetase alpha subunit KBQ49_15510 PF05746 DALR anticodon binding domain KBQ49_15510 PF02092 Glycyl-tRNA synthetase beta subunit KBQ49_15515 PF00580 UvrD/REP helicase N-terminal domain KBQ49_15515 PF13361 UvrD-like helicase C-terminal domain KBQ49_15520 PF00265 Thymidine kinase KBQ49_15530 PF04349 Periplasmic glucan biosynthesis protein, MdoG KBQ49_15545 PF06827 Zinc finger found in FPG and IleRS KBQ49_15545 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KBQ49_15545 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KBQ49_15560 PF00005 ABC transporter KBQ49_15570 PF01926 50S ribosome-binding GTPase KBQ49_15570 PF12631 MnmE helical domain KBQ49_15570 PF10396 GTP-binding protein TrmE N-terminus KBQ49_15575 PF14849 YidC periplasmic domain KBQ49_15575 PF02096 60Kd inner membrane protein KBQ49_15580 PF00825 Ribonuclease P KBQ49_15585 PF00468 Ribosomal protein L34 KBQ49_15590 PF00308 Bacterial dnaA protein KBQ49_15590 PF08299 Bacterial dnaA protein helix-turn-helix KBQ49_15590 PF11638 DnaA N-terminal domain KBQ49_15595 PF00712 DNA polymerase III beta subunit, N-terminal domain KBQ49_15595 PF02767 DNA polymerase III beta subunit, central domain KBQ49_15595 PF02768 DNA polymerase III beta subunit, C-terminal domain KBQ49_15600 PF02463 RecF/RecN/SMC N terminal domain KBQ49_15605 PF01751 Toprim domain KBQ49_15605 PF18053 DNA gyrase B subunit insert domain KBQ49_15605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KBQ49_15605 PF00204 DNA gyrase B KBQ49_15605 PF00986 DNA gyrase B subunit, carboxyl terminus KBQ49_15610 PF02517 CPBP intramembrane metalloprotease KBQ49_15615 PF01435 Peptidase family M48 KBQ49_15625 PF03544 Gram-negative bacterial TonB protein C-terminal KBQ49_15630 PF01618 MotA/TolQ/ExbB proton channel family KBQ49_15635 PF02472 Biopolymer transport protein ExbD/TolR KBQ49_15640 PF02472 Biopolymer transport protein ExbD/TolR KBQ49_15645 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ KBQ49_15655 PF13091 PLD-like domain KBQ49_15655 PF13396 Phospholipase_D-nuclease N-terminal KBQ49_15660 PF04055 Radical SAM superfamily KBQ49_15670 PF01810 LysE type translocator KBQ49_15675 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain KBQ49_15680 PF00155 Aminotransferase class I and II KBQ49_15685 PF00593 TonB dependent receptor KBQ49_15685 PF07715 TonB-dependent Receptor Plug Domain KBQ49_15695 PF01590 GAF domain KBQ49_15695 PF02954 Bacterial regulatory protein, Fis family KBQ49_15695 PF00158 Sigma-54 interaction domain KBQ49_15700 PF00171 Aldehyde dehydrogenase family KBQ49_15705 PF00107 Zinc-binding dehydrogenase KBQ49_15705 PF08240 Alcohol dehydrogenase GroES-like domain KBQ49_15725 PF02735 Ku70/Ku80 beta-barrel domain KBQ49_15730 PF04679 ATP dependent DNA ligase C terminal region KBQ49_15730 PF01068 ATP dependent DNA ligase domain KBQ49_15730 PF13298 DNA polymerase Ligase (LigD) KBQ49_15735 PF01070 FMN-dependent dehydrogenase KBQ49_15740 PF07729 FCD domain KBQ49_15740 PF00392 Bacterial regulatory proteins, gntR family KBQ49_15755 PF07055 Enoyl reductase FAD binding domain KBQ49_15755 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase KBQ49_15755 PF12241 Trans-2-enoyl-CoA reductase catalytic region KBQ49_15830 PF01804 Penicillin amidase KBQ49_15850 PF02677 Epoxyqueuosine reductase QueH KBQ49_15870 PF00593 TonB dependent receptor KBQ49_15870 PF07715 TonB-dependent Receptor Plug Domain KBQ49_15900 PF00135 Carboxylesterase family KBQ49_15915 PF03480 Bacterial extracellular solute-binding protein, family 7 KBQ49_15925 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component KBQ49_15930 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain KBQ49_15930 PF04616 Glycosyl hydrolases family 43 KBQ49_15935 PF00356 Bacterial regulatory proteins, lacI family KBQ49_15945 PF04962 KduI/IolB family KBQ49_15965 PF00351 Biopterin-dependent aromatic amino acid hydroxylase KBQ49_15970 PF01037 Lrp/AsnC ligand binding domain KBQ49_15990 PF05598 Transposase domain (DUF772) KBQ49_16010 PF01734 Patatin-like phospholipase KBQ49_16020 PF01569 PAP2 superfamily KBQ49_16025 PF01569 PAP2 superfamily KBQ49_16035 PF03741 Integral membrane protein TerC family KBQ49_16040 PF10672 S-adenosylmethionine-dependent methyltransferase KBQ49_16040 PF17785 PUA-like domain KBQ49_16065 PF04820 Tryptophan halogenase KBQ49_16075 PF02595 Glycerate kinase family KBQ49_16080 PF10947 Protein of unknown function (DUF2628) KBQ49_16090 PF00196 Bacterial regulatory proteins, luxR family KBQ49_16090 PF00072 Response regulator receiver domain KBQ49_16100 PF02308 MgtC family KBQ49_16115 PF02646 RmuC family KBQ49_16120 PF00255 Glutathione peroxidase KBQ49_16125 PF04333 MlaA lipoprotein KBQ49_16140 PF02470 MlaD protein KBQ49_16145 PF02405 Permease MlaE KBQ49_16150 PF00005 ABC transporter KBQ49_16155 PF17946 RecC C-terminal domain KBQ49_16160 PF13361 UvrD-like helicase C-terminal domain KBQ49_16160 PF12705 PD-(D/E)XK nuclease superfamily KBQ49_16160 PF00580 UvrD/REP helicase N-terminal domain KBQ49_16165 PF13538 UvrD-like helicase C-terminal domain KBQ49_16185 PF01230 HIT domain KBQ49_16190 PF05016 ParE toxin of type II toxin-antitoxin system, parDE KBQ49_16195 PF09386 Antitoxin ParD KBQ49_16210 PF01177 Asp/Glu/Hydantoin racemase KBQ49_16265 PF00083 Sugar (and other) transporter KBQ49_16270 PF01227 GTP cyclohydrolase I KBQ49_16295 PF01925 Sulfite exporter TauE/SafE KBQ49_16300 PF02810 SEC-C motif KBQ49_16310 PF13406 Transglycosylase SLT domain KBQ49_16315 PF07690 Major Facilitator Superfamily KBQ49_16320 PF01126 Heme oxygenase KBQ49_16325 PF01590 GAF domain KBQ49_16325 PF00360 Phytochrome region KBQ49_16325 PF13426 PAS domain KBQ49_16325 PF08446 PAS fold KBQ49_16365 PF02142 MGS-like domain KBQ49_16370 PF00150 Cellulase (glycosyl hydrolase family 5) KBQ49_16375 PF00150 Cellulase (glycosyl hydrolase family 5) KBQ49_16380 PF00150 Cellulase (glycosyl hydrolase family 5) KBQ49_16385 PF07992 Pyridine nucleotide-disulphide oxidoreductase KBQ49_16385 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KBQ49_16390 PF04898 Glutamate synthase central domain KBQ49_16390 PF01645 Conserved region in glutamate synthase KBQ49_16390 PF01493 GXGXG motif KBQ49_16390 PF00310 Glutamine amidotransferases class-II KBQ49_16435 PF09369 Domain of unknown function (DUF1998) KBQ49_16435 PF00271 Helicase conserved C-terminal domain KBQ49_16435 PF00270 DEAD/DEAH box helicase KBQ49_16465 PF00083 Sugar (and other) transporter KBQ49_16505 PF13614 AAA domain KBQ49_16520 PF13091 PLD-like domain KBQ49_16525 PF03061 Thioesterase superfamily KBQ49_16535 PF12146 Serine aminopeptidase, S33 KBQ49_16545 PF01161 Phosphatidylethanolamine-binding protein KBQ49_16550 PF02673 Bacitracin resistance protein BacA KBQ49_16555 PF03951 Glutamine synthetase, beta-Grasp domain KBQ49_16555 PF00120 Glutamine synthetase, catalytic domain KBQ49_16560 PF00543 Nitrogen regulatory protein P-II KBQ49_16565 PF00909 Ammonium Transporter Family KBQ49_16570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KBQ49_16570 PF00512 His Kinase A (phospho-acceptor) domain KBQ49_16570 PF00989 PAS fold KBQ49_16575 PF02954 Bacterial regulatory protein, Fis family KBQ49_16575 PF00072 Response regulator receiver domain KBQ49_16575 PF00158 Sigma-54 interaction domain KBQ49_16580 PF00080 Copper/zinc superoxide dismutase (SODC) KBQ49_16585 PF00080 Copper/zinc superoxide dismutase (SODC) KBQ49_16595 PF02803 Thiolase, C-terminal domain KBQ49_16595 PF00108 Thiolase, N-terminal domain KBQ49_16635 PF02556 Preprotein translocase subunit SecB KBQ49_16640 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KBQ49_16640 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KBQ49_16650 PF00588 SpoU rRNA Methylase family KBQ49_16660 PF00675 Insulinase (Peptidase family M16) KBQ49_16660 PF05193 Peptidase M16 inactive domain KBQ49_16670 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KBQ49_16670 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KBQ49_16675 PF02661 Fic/DOC family KBQ49_16675 PF13784 Fic/DOC family N-terminal KBQ49_16680 PF01555 DNA methylase KBQ49_16680 PF18273 Type III R-M EcoP15I C-terminal domain KBQ49_16690 PF00561 alpha/beta hydrolase fold KBQ49_16700 PF03692 Putative zinc- or iron-chelating domain KBQ49_16705 PF00501 AMP-binding enzyme KBQ49_16715 PF00144 Beta-lactamase KBQ49_16720 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family KBQ49_16730 PF01820 D-ala D-ala ligase N-terminus KBQ49_16730 PF07478 D-ala D-ala ligase C-terminus KBQ49_16740 PF03109 ABC1 family KBQ49_16745 PF11412 Disulphide bond corrector protein DsbC KBQ49_16745 PF02683 Cytochrome C biogenesis protein transmembrane region KBQ49_16750 PF00849 RNA pseudouridylate synthase KBQ49_16760 PF00472 RF-1 domain KBQ49_16770 PF01432 Peptidase family M3 KBQ49_16780 PF12833 Helix-turn-helix domain KBQ49_16790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KBQ49_16790 PF03466 LysR substrate binding domain KBQ49_16795 PF01274 Malate synthase KBQ49_16800 PF00463 Isocitrate lyase family KBQ49_16805 PF00990 Diguanylate cyclase, GGDEF domain KBQ49_16835 PF01740 STAS domain KBQ49_16835 PF00916 Sulfate permease family KBQ49_16865 PF12146 Serine aminopeptidase, S33 KBQ49_16870 PF16884 N-terminal domain of oxidoreductase KBQ49_16870 PF00107 Zinc-binding dehydrogenase KBQ49_16875 PF00248 Aldo/keto reductase family KBQ49_16885 PF00849 RNA pseudouridylate synthase KBQ49_16895 PF00270 DEAD/DEAH box helicase KBQ49_16895 PF04408 Helicase associated domain (HA2) KBQ49_16895 PF00271 Helicase conserved C-terminal domain KBQ49_16895 PF08482 ATP-dependent helicase C-terminal KBQ49_16900 PF01026 TatD related DNase KBQ49_16915 PF00691 OmpA family KBQ49_16915 PF04972 BON domain KBQ49_16945 PF00437 Type II/IV secretion system protein KBQ49_16950 PF03958 Bacterial type II/III secretion system short domain KBQ49_16950 PF00263 Bacterial type II and III secretion system protein KBQ49_16980 PF01061 ABC-2 type transporter KBQ49_16985 PF00005 ABC transporter KBQ49_16990 PF00970 Oxidoreductase FAD-binding domain KBQ49_16990 PF00111 2Fe-2S iron-sulfur cluster binding domain KBQ49_16990 PF00175 Oxidoreductase NAD-binding domain KBQ49_17000 PF01381 Helix-turn-helix KBQ49_17005 PF00561 alpha/beta hydrolase fold KBQ49_17010 PF00005 ABC transporter KBQ49_17025 PF03350 Uncharacterized protein family, UPF0114 KBQ49_17035 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region KBQ49_17035 PF00326 Prolyl oligopeptidase family KBQ49_17065 PF00490 Delta-aminolevulinic acid dehydratase KBQ49_17085 PF00175 Oxidoreductase NAD-binding domain KBQ49_17085 PF00667 FAD binding domain KBQ49_17085 PF00258 Flavodoxin KBQ49_17090 PF07676 WD40-like Beta Propeller Repeat KBQ49_17090 PF04052 TolB amino-terminal domain KBQ49_17095 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KBQ49_17095 PF01488 Shikimate / quinate 5-dehydrogenase KBQ49_17095 PF08501 Shikimate dehydrogenase substrate binding domain KBQ49_17105 PF13307 Helicase C-terminal domain KBQ49_17105 PF06733 DEAD_2 KBQ49_17115 PF06628 Catalase-related immune-responsive KBQ49_17115 PF00199 Catalase KBQ49_17130 PF00326 Prolyl oligopeptidase family KBQ49_17135 PF04993 TfoX N-terminal domain KBQ49_17165 PF01594 AI-2E family transporter KBQ49_17175 PF07995 Glucose / Sorbosone dehydrogenase KBQ49_17205 PF00589 Phage integrase family KBQ49_17205 PF13495 Phage integrase, N-terminal SAM-like domain KBQ49_17215 PF13495 Phage integrase, N-terminal SAM-like domain KBQ49_17215 PF00589 Phage integrase family KBQ49_17220 PF00920 Dehydratase family KBQ49_17225 PF06693 Protein of unknown function (DUF1190) KBQ49_17230 PF03738 Glutathionylspermidine synthase preATP-grasp KBQ49_17240 PF07726 ATPase family associated with various cellular activities (AAA) KBQ49_17240 PF17863 AAA lid domain KBQ49_17275 PF01037 Lrp/AsnC ligand binding domain KBQ49_17285 PF07690 Major Facilitator Superfamily KBQ49_17290 PF00132 Bacterial transferase hexapeptide (six repeats) KBQ49_17305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KBQ49_17305 PF00529 HlyD membrane-fusion protein of T1SS KBQ49_17310 PF00873 AcrB/AcrD/AcrF family KBQ49_17315 PF02321 Outer membrane efflux protein KBQ49_17320 PF00563 EAL domain KBQ49_17320 PF00990 Diguanylate cyclase, GGDEF domain KBQ49_17320 PF00360 Phytochrome region KBQ49_17320 PF01590 GAF domain KBQ49_17325 PF01134 Glucose inhibited division protein A KBQ49_17325 PF13932 GidA associated domain KBQ49_17335 PF00291 Pyridoxal-phosphate dependent enzyme KBQ49_17350 PF13649 Methyltransferase domain KBQ49_17360 PF12697 Alpha/beta hydrolase family KBQ49_17365 PF00155 Aminotransferase class I and II KBQ49_17370 PF06968 Biotin and Thiamin Synthesis associated domain KBQ49_17370 PF04055 Radical SAM superfamily KBQ49_17380 PF07549 SecD/SecF GG Motif KBQ49_17380 PF02355 Protein export membrane protein KBQ49_17385 PF01040 UbiA prenyltransferase family KBQ49_17410 PF01078 Magnesium chelatase, subunit ChlI KBQ49_17410 PF13335 Magnesium chelatase, subunit ChlI C-terminal KBQ49_17415 PF04380 Membrane fusogenic activity KBQ49_17425 PF00543 Nitrogen regulatory protein P-II KBQ49_17430 PF17284 Spermidine synthase tetramerisation domain KBQ49_17435 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KBQ49_17435 PF17810 Arginine decarboxylase helical bundle domain KBQ49_17435 PF17944 Arginine decarboxylase C-terminal helical extension KBQ49_17445 PF00975 Thioesterase domain KBQ49_17445 PF00550 Phosphopantetheine attachment site KBQ49_17445 PF00668 Condensation domain KBQ49_17445 PF13193 AMP-binding enzyme C-terminal domain KBQ49_17445 PF00501 AMP-binding enzyme KBQ49_17450 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase KBQ49_17450 PF03033 Glycosyltransferase family 28 N-terminal domain KBQ49_17455 PF01757 Acyltransferase family KBQ49_17460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KBQ49_17460 PF03466 LysR substrate binding domain KBQ49_17480 PF00106 short chain dehydrogenase KBQ49_17490 PF00750 tRNA synthetases class I (R) KBQ49_17490 PF03485 Arginyl tRNA synthetase N terminal domain KBQ49_17490 PF05746 DALR anticodon binding domain KBQ49_17495 PF04002 RadC-like JAB domain KBQ49_17500 PF04127 DNA / pantothenate metabolism flavoprotein KBQ49_17500 PF02441 Flavoprotein KBQ49_17505 PF00692 dUTPase KBQ49_17510 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KBQ49_17510 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KBQ49_17510 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KBQ49_17510 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KBQ49_17520 PF00156 Phosphoribosyl transferase domain KBQ49_17530 PF07690 Major Facilitator Superfamily KBQ49_17540 PF03702 Anhydro-N-acetylmuramic acid kinase KBQ49_17545 PF04225 Opacity-associated protein A LysM-like domain KBQ49_17545 PF01551 Peptidase family M23 KBQ49_17550 PF00579 tRNA synthetases class I (W and Y) KBQ49_17580 PF08240 Alcohol dehydrogenase GroES-like domain KBQ49_17580 PF00107 Zinc-binding dehydrogenase KBQ49_17595 PF01551 Peptidase family M23 KBQ49_17600 PF13180 PDZ domain KBQ49_17600 PF03572 Peptidase family S41 KBQ49_17620 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) KBQ49_17635 PF13520 Amino acid permease KBQ49_17640 PF00294 pfkB family carbohydrate kinase KBQ49_17640 PF01467 Cytidylyltransferase-like KBQ49_17645 PF02056 Family 4 glycosyl hydrolase KBQ49_17645 PF11975 Family 4 glycosyl hydrolase C-terminal domain KBQ49_17655 PF00171 Aldehyde dehydrogenase family KBQ49_17655 PF01619 Proline dehydrogenase KBQ49_17655 PF14850 DNA-binding domain of Proline dehydrogenase KBQ49_17655 PF18327 Proline utilization A proline dehydrogenase N-terminal domain KBQ49_17665 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KBQ49_17665 PF02790 Cytochrome C oxidase subunit II, transmembrane domain KBQ49_17670 PF00115 Cytochrome C and Quinol oxidase polypeptide I KBQ49_17675 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 KBQ49_17680 PF00510 Cytochrome c oxidase subunit III KBQ49_17705 PF01040 UbiA prenyltransferase family KBQ49_17720 PF13593 SBF-like CPA transporter family (DUF4137) KBQ49_17725 PF10410 DnaB-helicase binding domain of primase KBQ49_17725 PF08278 DNA primase DnaG DnaB-binding KBQ49_17725 PF08275 DNA primase catalytic core, N-terminal domain KBQ49_17725 PF01807 CHC2 zinc finger KBQ49_17730 PF03631 Virulence factor BrkB KBQ49_17740 PF01165 Ribosomal protein S21 KBQ49_17745 PF00814 Glycoprotease family KBQ49_17750 PF02152 Dihydroneopterin aldolase KBQ49_17770 PF14403 Circularly permuted ATP-grasp type 2 KBQ49_17780 PF00933 Glycosyl hydrolase family 3 N terminal domain KBQ49_17780 PF14310 Fibronectin type III-like domain KBQ49_17780 PF01915 Glycosyl hydrolase family 3 C-terminal domain KBQ49_17785 PF07995 Glucose / Sorbosone dehydrogenase KBQ49_17805 PF13520 Amino acid permease KBQ49_17815 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KBQ49_17815 PF13378 Enolase C-terminal domain-like KBQ49_17825 PF00593 TonB dependent receptor KBQ49_17825 PF07715 TonB-dependent Receptor Plug Domain KBQ49_17855 PF04717 Type VI secretion system, phage-baseplate injector KBQ49_17855 PF01471 Putative peptidoglycan binding domain KBQ49_17890 PF07063 Domain of unknown function (DUF1338) KBQ49_17900 PF00873 AcrB/AcrD/AcrF family KBQ49_17905 PF00873 AcrB/AcrD/AcrF family KBQ49_17910 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KBQ49_17920 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term KBQ49_17920 PF14489 QueF-like protein KBQ49_17925 PF04972 BON domain KBQ49_17925 PF01476 LysM domain KBQ49_17935 PF09827 CRISPR associated protein Cas2 KBQ49_17940 PF01867 CRISPR associated protein Cas1 KBQ49_17960 PF09704 CRISPR-associated protein (Cas_Cas5) KBQ49_17975 PF03971 Monomeric isocitrate dehydrogenase KBQ49_17980 PF00266 Aminotransferase class-V KBQ49_17985 PF07715 TonB-dependent Receptor Plug Domain KBQ49_17985 PF00593 TonB dependent receptor KBQ49_17990 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) KBQ49_18000 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KBQ49_18000 PF07498 Rho termination factor, N-terminal domain KBQ49_18000 PF07497 Rho termination factor, RNA-binding domain KBQ49_18005 PF00085 Thioredoxin KBQ49_18010 PF12300 ATP-dependent RNA helicase RhlB KBQ49_18010 PF00271 Helicase conserved C-terminal domain KBQ49_18010 PF00270 DEAD/DEAH box helicase KBQ49_18015 PF00005 ABC transporter KBQ49_18020 PF18075 FtsX extracellular domain KBQ49_18025 PF00072 Response regulator receiver domain KBQ49_18025 PF01339 CheB methylesterase KBQ49_18030 PF03167 Uracil DNA glycosylase superfamily KBQ49_18035 PF00140 Sigma-70 factor, region 1.2 KBQ49_18035 PF04542 Sigma-70 region 2 KBQ49_18035 PF04545 Sigma-70, region 4 KBQ49_18040 PF03458 UPF0126 domain KBQ49_18045 PF07992 Pyridine nucleotide-disulphide oxidoreductase KBQ49_18055 PF00270 DEAD/DEAH box helicase KBQ49_18055 PF00271 Helicase conserved C-terminal domain KBQ49_18055 PF17764 3′ DNA-binding domain (3′BD) KBQ49_18055 PF18074 Primosomal protein N C-terminal domain KBQ49_18055 PF18319 PriA DNA helicase Cys-rich region (CRR) domain KBQ49_18065 PF01554 MatE KBQ49_18070 PF01343 Peptidase family S49 KBQ49_18095 PF01300 Telomere recombination KBQ49_18100 PF01131 DNA topoisomerase KBQ49_18100 PF01751 Toprim domain KBQ49_18100 PF13368 Topoisomerase C-terminal repeat KBQ49_18105 PF06271 RDD family KBQ49_18110 PF07963 Prokaryotic N-terminal methylation motif KBQ49_18110 PF00114 Pilin (bacterial filament) KBQ49_18115 PF04361 Protein of unknown function (DUF494) KBQ49_18120 PF17782 DprA winged helix domain KBQ49_18120 PF02481 DNA recombination-mediator protein A KBQ49_18125 PF01476 LysM domain KBQ49_18130 PF01327 Polypeptide deformylase KBQ49_18135 PF00551 Formyl transferase KBQ49_18135 PF02911 Formyl transferase, C-terminal domain KBQ49_18140 PF01189 16S rRNA methyltransferase RsmB/F KBQ49_18140 PF01029 NusB family KBQ49_18145 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase KBQ49_18155 PF04932 O-Antigen ligase KBQ49_18160 PF00535 Glycosyl transferase family 2 KBQ49_18180 PF00925 GTP cyclohydrolase II KBQ49_18195 PF02580 D-Tyr-tRNA(Tyr) deacylase KBQ49_18200 PF04545 Sigma-70, region 4 KBQ49_18200 PF04542 Sigma-70 region 2 KBQ49_18200 PF00140 Sigma-70 factor, region 1.2 KBQ49_18200 PF03979 Sigma-70 factor, region 1.1 KBQ49_18200 PF04546 Sigma-70, non-essential region KBQ49_18200 PF04539 Sigma-70 region 3 KBQ49_18225 PF07690 Major Facilitator Superfamily KBQ49_18230 PF00356 Bacterial regulatory proteins, lacI family KBQ49_18230 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KBQ49_18240 PF00128 Alpha amylase, catalytic domain KBQ49_18240 PF11896 Domain of unknown function (DUF3416) KBQ49_18245 PF00128 Alpha amylase, catalytic domain KBQ49_18245 PF16657 Maltogenic Amylase, C-terminal domain KBQ49_18250 PF00128 Alpha amylase, catalytic domain KBQ49_18250 PF02806 Alpha amylase, C-terminal all-beta domain KBQ49_18250 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KBQ49_18260 PF00589 Phage integrase family KBQ49_18280 PF07996 Type IV secretion system proteins KBQ49_18295 PF04610 TrbL/VirB6 plasmid conjugal transfer protein KBQ49_18305 PF01555 DNA methylase KBQ49_18335 PF03377 TAL effector repeat KBQ49_18340 PF03377 TAL effector repeat KBQ49_18350 PF03377 TAL effector repeat KBQ49_18355 PF03377 TAL effector repeat KBQ49_18375 PF12706 Beta-lactamase superfamily domain KBQ49_18380 PF00440 Bacterial regulatory proteins, tetR family KBQ49_18380 PF08359 YsiA-like protein, C-terminal region KBQ49_18385 PF01494 FAD binding domain KBQ49_18420 PF00672 HAMP domain KBQ49_18420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KBQ49_18420 PF02203 Tar ligand binding domain homologue KBQ49_18440 PF05067 Manganese containing catalase KBQ49_18445 PF05974 Domain of unknown function (DUF892) KBQ49_18450 PF05974 Domain of unknown function (DUF892) KBQ49_18460 PF00990 Diguanylate cyclase, GGDEF domain KBQ49_18460 PF00563 EAL domain KBQ49_18460 PF03707 Bacterial signalling protein N terminal repeat KBQ49_18465 PF06745 KaiC KBQ49_18475 PF00440 Bacterial regulatory proteins, tetR family KBQ49_18480 PF00970 Oxidoreductase FAD-binding domain KBQ49_18480 PF00111 2Fe-2S iron-sulfur cluster binding domain KBQ49_18480 PF00175 Oxidoreductase NAD-binding domain KBQ49_18485 PF00487 Fatty acid desaturase KBQ49_18495 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KBQ49_18495 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KBQ49_18495 PF00205 Thiamine pyrophosphate enzyme, central domain KBQ49_18500 PF00512 His Kinase A (phospho-acceptor) domain KBQ49_18500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KBQ49_18505 PF00158 Sigma-54 interaction domain KBQ49_18505 PF02954 Bacterial regulatory protein, Fis family KBQ49_18505 PF00072 Response regulator receiver domain KBQ49_18520 PF07690 Major Facilitator Superfamily KBQ49_18530 PF18766 SWI2/SNF2 ATPase KBQ49_18530 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) KBQ49_18530 PF11867 Domain of unknown function (DUF3387) KBQ49_18550 PF12161 HsdM N-terminal domain KBQ49_18550 PF02384 N-6 DNA Methylase KBQ49_18565 PF10414 Sirohaem synthase dimerisation region KBQ49_18565 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KBQ49_18565 PF14824 Sirohaem biosynthesis protein central KBQ49_18570 PF01339 CheB methylesterase KBQ49_18570 PF00072 Response regulator receiver domain KBQ49_18580 PF07690 Major Facilitator Superfamily KBQ49_18585 PF18267 Rubredoxin NAD+ reductase C-terminal domain KBQ49_18585 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KBQ49_18585 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KBQ49_18585 PF04324 BFD-like [2Fe-2S] binding domain KBQ49_18585 PF07992 Pyridine nucleotide-disulphide oxidoreductase KBQ49_18590 PF00355 Rieske [2Fe-2S] domain KBQ49_18595 PF01568 Molydopterin dinucleotide binding domain KBQ49_18595 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KBQ49_18595 PF00384 Molybdopterin oxidoreductase KBQ49_18595 PF04324 BFD-like [2Fe-2S] binding domain KBQ49_18600 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KBQ49_18605 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KBQ49_18605 PF00128 Alpha amylase, catalytic domain KBQ49_18615 PF00128 Alpha amylase, catalytic domain KBQ49_18620 PF02446 4-alpha-glucanotransferase KBQ49_18625 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KBQ49_18625 PF11941 Domain of unknown function (DUF3459) KBQ49_18625 PF00128 Alpha amylase, catalytic domain KBQ49_18630 PF02806 Alpha amylase, C-terminal all-beta domain KBQ49_18630 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KBQ49_18630 PF00128 Alpha amylase, catalytic domain KBQ49_18635 PF08323 Starch synthase catalytic domain KBQ49_18635 PF00534 Glycosyl transferases group 1 KBQ49_18645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KBQ49_18645 PF00072 Response regulator receiver domain KBQ49_18650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KBQ49_18650 PF00512 His Kinase A (phospho-acceptor) domain KBQ49_18650 PF08448 PAS fold KBQ49_18650 PF13188 PAS domain KBQ49_18650 PF00072 Response regulator receiver domain KBQ49_18655 PF13632 Glycosyl transferase family group 2 KBQ49_18665 PF04397 LytTr DNA-binding domain KBQ49_18665 PF00072 Response regulator receiver domain KBQ49_18670 PF03900 Porphobilinogen deaminase, C-terminal domain KBQ49_18670 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain KBQ49_18695 PF01638 HxlR-like helix-turn-helix KBQ49_18710 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain KBQ49_18710 PF00326 Prolyl oligopeptidase family KBQ49_18715 PF00155 Aminotransferase class I and II KBQ49_18720 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain KBQ49_18720 PF00326 Prolyl oligopeptidase family KBQ49_18725 PF04304 Protein of unknown function (DUF454) KBQ49_18735 PF01678 Diaminopimelate epimerase KBQ49_18745 PF00589 Phage integrase family KBQ49_18745 PF02899 Phage integrase, N-terminal SAM-like domain KBQ49_18750 PF00227 Proteasome subunit KBQ49_18755 PF00004 ATPase family associated with various cellular activities (AAA) KBQ49_18755 PF10431 C-terminal, D2-small domain, of ClpB protein KBQ49_18755 PF07724 AAA domain (Cdc48 subfamily) KBQ49_18770 PF00593 TonB dependent receptor KBQ49_18770 PF07715 TonB-dependent Receptor Plug Domain KBQ49_18780 PF01209 ubiE/COQ5 methyltransferase family KBQ49_18795 PF01433 Peptidase family M1 domain KBQ49_18795 PF11838 ERAP1-like C-terminal domain KBQ49_18800 PF00364 Biotin-requiring enzyme KBQ49_18800 PF00561 alpha/beta hydrolase fold KBQ49_18815 PF13360 PQQ-like domain KBQ49_18820 PF00497 Bacterial extracellular solute-binding proteins, family 3 KBQ49_18825 PF00034 Cytochrome c KBQ49_18825 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KBQ49_18825 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP KBQ49_18835 PF08240 Alcohol dehydrogenase GroES-like domain KBQ49_18835 PF00107 Zinc-binding dehydrogenase KBQ49_18845 PF02954 Bacterial regulatory protein, Fis family KBQ49_18845 PF00158 Sigma-54 interaction domain KBQ49_18845 PF01590 GAF domain KBQ49_18850 PF00294 pfkB family carbohydrate kinase KBQ49_18860 PF04085 rod shape-determining protein MreC KBQ49_18870 PF00905 Penicillin binding protein transpeptidase domain KBQ49_18870 PF03717 Penicillin-binding Protein dimerisation domain KBQ49_18875 PF01098 Cell cycle protein KBQ49_18880 PF01083 Cutinase KBQ49_18885 PF00295 Glycosyl hydrolases family 28 KBQ49_18890 PF13406 Transglycosylase SLT domain KBQ49_18895 PF03330 Lytic transglycolase KBQ49_18895 PF05036 Sporulation related domain KBQ49_18900 PF00768 D-alanyl-D-alanine carboxypeptidase KBQ49_18900 PF07943 Penicillin-binding protein 5, C-terminal domain KBQ49_18960 PF04359 Protein of unknown function (DUF493) KBQ49_18965 PF03099 Biotin/lipoate A/B protein ligase family KBQ49_18970 PF04055 Radical SAM superfamily KBQ49_18970 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family KBQ49_18975 PF00595 PDZ domain KBQ49_18975 PF03572 Peptidase family S41 KBQ49_18975 PF17804 Tail specific protease N-terminal domain KBQ49_18975 PF11818 C-terminal domain of tail specific protease (DUF3340) KBQ49_19005 PF01467 Cytidylyltransferase-like KBQ49_19005 PF00293 NUDIX domain KBQ49_19025 PF08338 Domain of unknown function (DUF1731) KBQ49_19025 PF01370 NAD dependent epimerase/dehydratase family KBQ49_19035 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain KBQ49_19035 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KBQ49_19040 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KBQ49_19040 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KBQ49_19045 PF04972 BON domain KBQ49_19055 PF00989 PAS fold KBQ49_19055 PF00512 His Kinase A (phospho-acceptor) domain KBQ49_19055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KBQ49_19060 PF00072 Response regulator receiver domain KBQ49_19065 PF00512 His Kinase A (phospho-acceptor) domain KBQ49_19065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KBQ49_19075 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KBQ49_19095 PF03330 Lytic transglycolase KBQ49_19100 PF05598 Transposase domain (DUF772) KBQ49_19115 PF02837 Glycosyl hydrolases family 2, sugar binding domain KBQ49_19115 PF02836 Glycosyl hydrolases family 2, TIM barrel domain KBQ49_19115 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 KBQ49_19115 PF16355 Domain of unknown function (DUF4982) KBQ49_19115 PF00703 Glycosyl hydrolases family 2 KBQ49_19130 PF07702 UTRA domain KBQ49_19130 PF00392 Bacterial regulatory proteins, gntR family KBQ49_19135 PF07690 Major Facilitator Superfamily KBQ49_19140 PF00356 Bacterial regulatory proteins, lacI family KBQ49_19145 PF01380 SIS domain KBQ49_19150 PF01979 Amidohydrolase family KBQ49_19160 PF12627 Probable RNA and SrmB- binding site of polymerase A KBQ49_19160 PF01743 Poly A polymerase head domain KBQ49_19160 PF01966 HD domain KBQ49_19165 PF01464 Transglycosylase SLT domain KBQ49_19165 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain KBQ49_19170 PF07715 TonB-dependent Receptor Plug Domain KBQ49_19170 PF00593 TonB dependent receptor KBQ49_19180 PF01323 DSBA-like thioredoxin domain KBQ49_19185 PF01323 DSBA-like thioredoxin domain KBQ49_19190 PF00034 Cytochrome c KBQ49_19195 PF01926 50S ribosome-binding GTPase KBQ49_19215 PF04107 Glutamate-cysteine ligase family 2(GCS2) KBQ49_19230 PF00512 His Kinase A (phospho-acceptor) domain KBQ49_19230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KBQ49_19230 PF00672 HAMP domain KBQ49_19235 PF00486 Transcriptional regulatory protein, C terminal KBQ49_19235 PF00072 Response regulator receiver domain KBQ49_19240 PF02583 Metal-sensitive transcriptional repressor KBQ49_19245 PF08240 Alcohol dehydrogenase GroES-like domain KBQ49_19245 PF00107 Zinc-binding dehydrogenase KBQ49_19250 PF04828 Glutathione-dependent formaldehyde-activating enzyme KBQ49_19255 PF00756 Putative esterase KBQ49_19260 PF00155 Aminotransferase class I and II KBQ49_19260 PF00392 Bacterial regulatory proteins, gntR family KBQ49_19265 PF02567 Phenazine biosynthesis-like protein KBQ49_19305 PF01979 Amidohydrolase family KBQ49_19325 PF00462 Glutaredoxin KBQ49_19330 PF01522 Polysaccharide deacetylase KBQ49_19350 PF00155 Aminotransferase class I and II KBQ49_19355 PF03193 RsgA GTPase KBQ49_19370 PF00128 Alpha amylase, catalytic domain KBQ49_19385 PF00356 Bacterial regulatory proteins, lacI family KBQ49_19390 PF00106 short chain dehydrogenase KBQ49_19395 PF03600 Citrate transporter KBQ49_19405 PF00072 Response regulator receiver domain KBQ49_19405 PF00486 Transcriptional regulatory protein, C terminal KBQ49_19420 PF00196 Bacterial regulatory proteins, luxR family KBQ49_19420 PF00072 Response regulator receiver domain KBQ49_19430 PF00512 His Kinase A (phospho-acceptor) domain KBQ49_19430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KBQ49_19440 PF00375 Sodium:dicarboxylate symporter family KBQ49_19445 PF01515 Phosphate acetyl/butaryl transferase KBQ49_19445 PF03949 Malic enzyme, NAD binding domain KBQ49_19445 PF00390 Malic enzyme, N-terminal domain KBQ49_19485 PF03412 Peptidase C39 family KBQ49_19485 PF00005 ABC transporter KBQ49_19485 PF00664 ABC transporter transmembrane region KBQ49_19510 PF03279 Bacterial lipid A biosynthesis acyltransferase KBQ49_19515 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) KBQ49_19520 PF02321 Outer membrane efflux protein KBQ49_19535 PF00990 Diguanylate cyclase, GGDEF domain KBQ49_19540 PF00180 Isocitrate/isopropylmalate dehydrogenase KBQ49_19545 PF00694 Aconitase C-terminal domain KBQ49_19555 PF00330 Aconitase family (aconitate hydratase) KBQ49_19565 PF00682 HMGL-like KBQ49_19565 PF08502 LeuA allosteric (dimerisation) domain KBQ49_19570 PF00291 Pyridoxal-phosphate dependent enzyme KBQ49_19580 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KBQ49_19580 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KBQ49_19580 PF00205 Thiamine pyrophosphate enzyme, central domain KBQ49_19585 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KBQ49_19585 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KBQ49_19595 PF01964 Radical SAM ThiC family KBQ49_19595 PF13667 ThiC-associated domain KBQ49_19615 PF00719 Inorganic pyrophosphatase KBQ49_19635 PF00365 Phosphofructokinase KBQ49_19645 PF01225 Mur ligase family, catalytic domain KBQ49_19645 PF02875 Mur ligase family, glutamate ligase domain KBQ49_19645 PF08245 Mur ligase middle domain KBQ49_19655 PF01569 PAP2 superfamily KBQ49_19670 PF00480 ROK family KBQ49_19680 PF00202 Aminotransferase class-III KBQ49_19690 PF00202 Aminotransferase class-III KBQ49_19700 PF02581 Thiamine monophosphate synthase KBQ49_19705 PF00301 Rubredoxin KBQ49_19710 PF13369 Transglutaminase-like superfamily KBQ49_19720 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) KBQ49_19730 PF01812 5-formyltetrahydrofolate cyclo-ligase family KBQ49_19740 PF05164 Cell division protein ZapA KBQ49_19750 PF00563 EAL domain KBQ49_19750 PF03707 Bacterial signalling protein N terminal repeat KBQ49_19750 PF00990 Diguanylate cyclase, GGDEF domain KBQ49_19755 PF03695 Uncharacterised protein family (UPF0149) KBQ49_19760 PF05195 Aminopeptidase P, N-terminal domain KBQ49_19760 PF00557 Metallopeptidase family M24 KBQ49_19765 PF00557 Metallopeptidase family M24 KBQ49_19780 PF01207 Dihydrouridine synthase (Dus) KBQ49_19795 PF00294 pfkB family carbohydrate kinase KBQ49_19795 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) KBQ49_19800 PF07670 Nucleoside recognition KBQ49_19800 PF07662 Na+ dependent nucleoside transporter C-terminus KBQ49_19800 PF01773 Na+ dependent nucleoside transporter N-terminus KBQ49_19805 PF00248 Aldo/keto reductase family KBQ49_19815 PF07715 TonB-dependent Receptor Plug Domain KBQ49_19815 PF00593 TonB dependent receptor KBQ49_19840 PF00005 ABC transporter KBQ49_19845 PF13472 GDSL-like Lipase/Acylhydrolase family KBQ49_19850 PF00072 Response regulator receiver domain KBQ49_19850 PF00486 Transcriptional regulatory protein, C terminal KBQ49_19855 PF00512 His Kinase A (phospho-acceptor) domain KBQ49_19855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KBQ49_19855 PF08521 Two-component sensor kinase N-terminal KBQ49_19865 PF01219 Prokaryotic diacylglycerol kinase KBQ49_19870 PF03741 Integral membrane protein TerC family KBQ49_19875 PF04011 LemA family KBQ49_19890 PF01790 Prolipoprotein diacylglyceryl transferase KBQ49_19895 PF00303 Thymidylate synthase KBQ49_19905 PF00186 Dihydrofolate reductase KBQ49_19910 PF00149 Calcineurin-like phosphoesterase KBQ49_19915 PF04379 ApaG domain KBQ49_19920 PF00398 Ribosomal RNA adenine dimethylase KBQ49_19925 PF04166 Pyridoxal phosphate biosynthetic protein PdxA KBQ49_19930 PF09312 SurA N-terminal domain KBQ49_19930 PF00639 PPIC-type PPIASE domain KBQ49_19935 PF03968 OstA-like protein KBQ49_19935 PF04453 LPS transport system D KBQ49_19940 PF00850 Histone deacetylase domain KBQ49_19945 PF01923 Cobalamin adenosyltransferase KBQ49_19955 PF01494 FAD binding domain KBQ49_19975 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KBQ49_19975 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KBQ49_19980 PF01728 FtsJ-like methyltransferase KBQ49_19980 PF18125 RlmM ferredoxin-like domain KBQ49_20000 PF00892 EamA-like transporter family KBQ49_20005 PF00749 tRNA synthetases class I (E and Q), catalytic domain KBQ49_20005 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain KBQ49_20030 PF01625 Peptide methionine sulfoxide reductase KBQ49_20035 PF00923 Transaldolase/Fructose-6-phosphate aldolase KBQ49_20040 PF01272 Transcription elongation factor, GreA/GreB, C-term KBQ49_20040 PF14760 Rnk N-terminus KBQ49_20050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KBQ49_20050 PF03466 LysR substrate binding domain KBQ49_20055 PF07992 Pyridine nucleotide-disulphide oxidoreductase KBQ49_20055 PF13192 Thioredoxin domain KBQ49_20060 PF10417 C-terminal domain of 1-Cys peroxiredoxin KBQ49_20060 PF00578 AhpC/TSA family KBQ49_20065 PF17827 PrmC N-terminal domain KBQ49_20065 PF05175 Methyltransferase small domain KBQ49_20085 PF03743 Bacterial conjugation TrbI-like protein KBQ49_20105 PF01131 DNA topoisomerase KBQ49_20105 PF01751 Toprim domain KBQ49_20220 PF01464 Transglycosylase SLT domain KBQ49_20230 PF02534 Type IV secretory system Conjugative DNA transfer KBQ49_20240 PF00437 Type II/IV secretion system protein KBQ49_20255 PF03135 CagE, TrbE, VirB family, component of type IV transporter system