locus-tag class description ISN31_00040 PF01022 Bacterial regulatory protein, arsR family ISN31_00060 PF03922 OmpW family ISN31_00065 PF03922 OmpW family ISN31_00070 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ISN31_00070 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ISN31_00110 PF13419 Haloacid dehalogenase-like hydrolase ISN31_00120 PF00274 Fructose-bisphosphate aldolase class-I ISN31_00165 PF00266 Aminotransferase class-V ISN31_00180 PF14824 Sirohaem biosynthesis protein central ISN31_00180 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ISN31_00180 PF10414 Sirohaem synthase dimerisation region ISN31_00185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISN31_00185 PF03466 LysR substrate binding domain ISN31_00200 PF03960 ArsC family ISN31_00230 PF01507 Phosphoadenosine phosphosulfate reductase family ISN31_00235 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ISN31_00235 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ISN31_00240 PF00175 Oxidoreductase NAD-binding domain ISN31_00240 PF00667 FAD binding domain ISN31_00240 PF00258 Flavodoxin ISN31_00245 PF01507 Phosphoadenosine phosphosulfate reductase family ISN31_00250 PF00009 Elongation factor Tu GTP binding domain ISN31_00255 PF00672 HAMP domain ISN31_00255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN31_00255 PF02203 Tar ligand binding domain homologue ISN31_00285 PF08032 RNA 2'-O ribose methyltransferase substrate binding ISN31_00285 PF00588 SpoU rRNA Methylase family ISN31_00300 PF00356 Bacterial regulatory proteins, lacI family ISN31_00315 PF01741 Large-conductance mechanosensitive channel, MscL ISN31_00320 PF01557 Fumarylacetoacetate (FAA) hydrolase family ISN31_00335 PF03600 Citrate transporter ISN31_00335 PF02080 TrkA-C domain ISN31_00340 PF02390 Putative methyltransferase ISN31_00345 PF05690 Thiazole biosynthesis protein ThiG ISN31_00365 PF00120 Glutamine synthetase, catalytic domain ISN31_00370 PF04204 Homoserine O-succinyltransferase ISN31_00375 PF01810 LysE type translocator ISN31_00380 PF07722 Peptidase C26 ISN31_00390 PF01053 Cys/Met metabolism PLP-dependent enzyme ISN31_00395 PF00266 Aminotransferase class-V ISN31_00420 PF05506 Domain of unknown function (DUF756) ISN31_00420 PF04185 Phosphoesterase family ISN31_00425 PF07660 Secretin and TonB N terminus short domain ISN31_00425 PF07715 TonB-dependent Receptor Plug Domain ISN31_00425 PF00593 TonB dependent receptor ISN31_00430 PF08443 RimK-like ATP-grasp domain ISN31_00430 PF18030 RimK PreATP-grasp domain ISN31_00440 PF00072 Response regulator receiver domain ISN31_00440 PF00486 Transcriptional regulatory protein, C terminal ISN31_00445 PF00512 His Kinase A (phospho-acceptor) domain ISN31_00445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN31_00445 PF11808 Phosphate regulon sensor protein PhoR ISN31_00445 PF00989 PAS fold ISN31_00450 PF05598 Transposase domain (DUF772) ISN31_00455 PF01121 Dephospho-CoA kinase ISN31_00460 PF01478 Type IV leader peptidase family ISN31_00460 PF06750 Bacterial Peptidase A24 N-terminal domain ISN31_00465 PF00482 Type II secretion system (T2SS), protein F ISN31_00470 PF00114 Pilin (bacterial filament) ISN31_00470 PF07963 Prokaryotic N-terminal methylation motif ISN31_00480 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ISN31_00480 PF00437 Type II/IV secretion system protein ISN31_00485 PF01381 Helix-turn-helix ISN31_00495 PF00158 Sigma-54 interaction domain ISN31_00495 PF00072 Response regulator receiver domain ISN31_00495 PF02954 Bacterial regulatory protein, Fis family ISN31_00500 PF00512 His Kinase A (phospho-acceptor) domain ISN31_00500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN31_00505 PF08442 ATP-grasp domain ISN31_00505 PF00549 CoA-ligase ISN31_00510 PF00549 CoA-ligase ISN31_00510 PF02629 CoA binding domain ISN31_00525 PF00795 Carbon-nitrogen hydrolase ISN31_00525 PF02540 NAD synthase ISN31_00535 PF03781 Sulfatase-modifying factor enzyme 1 ISN31_00535 PF12867 DinB superfamily ISN31_00540 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ISN31_00550 PF00528 Binding-protein-dependent transport system inner membrane component ISN31_00555 PF00005 ABC transporter ISN31_00565 PF13525 Outer membrane lipoprotein ISN31_00570 PF00849 RNA pseudouridylate synthase ISN31_00575 PF02578 Multi-copper polyphenol oxidoreductase laccase ISN31_00585 PF01011 PQQ enzyme repeat ISN31_00590 PF00982 Glycosyltransferase family 20 ISN31_00595 PF00723 Glycosyl hydrolases family 15 ISN31_00600 PF02358 Trehalose-phosphatase ISN31_00610 PF00593 TonB dependent receptor ISN31_00610 PF07715 TonB-dependent Receptor Plug Domain ISN31_00645 PF17871 AAA lid domain ISN31_00645 PF02861 Clp amino terminal domain, pathogenicity island component ISN31_00645 PF10431 C-terminal, D2-small domain, of ClpB protein ISN31_00645 PF07724 AAA domain (Cdc48 subfamily) ISN31_00645 PF00004 ATPase family associated with various cellular activities (AAA) ISN31_00660 PF01053 Cys/Met metabolism PLP-dependent enzyme ISN31_00670 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ISN31_00670 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ISN31_00675 PF06276 Ferric iron reductase FhuF-like transporter ISN31_00675 PF04183 IucA / IucC family ISN31_00680 PF07690 Major Facilitator Superfamily ISN31_00685 PF06276 Ferric iron reductase FhuF-like transporter ISN31_00685 PF04183 IucA / IucC family ISN31_00695 PF00593 TonB dependent receptor ISN31_00695 PF07660 Secretin and TonB N terminus short domain ISN31_00695 PF07715 TonB-dependent Receptor Plug Domain ISN31_00705 PF02254 TrkA-N domain ISN31_00705 PF00999 Sodium/hydrogen exchanger family ISN31_00720 PF07715 TonB-dependent Receptor Plug Domain ISN31_00720 PF00593 TonB dependent receptor ISN31_00775 PF00561 alpha/beta hydrolase fold ISN31_00790 PF00293 NUDIX domain ISN31_00795 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ISN31_00795 PF00476 DNA polymerase family A ISN31_00795 PF01612 3'-5' exonuclease ISN31_00795 PF01367 5'-3' exonuclease, C-terminal SAM fold ISN31_00820 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ISN31_00820 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ISN31_00840 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch ISN31_00845 PF02233 NAD(P) transhydrogenase beta subunit ISN31_00860 PF01063 Amino-transferase class IV ISN31_00865 PF00082 Subtilase family ISN31_00865 PF04151 Bacterial pre-peptidase C-terminal domain ISN31_00895 PF03358 NADPH-dependent FMN reductase ISN31_00900 PF03631 Virulence factor BrkB ISN31_00905 PF08534 Redoxin ISN31_00910 PF00708 Acylphosphatase ISN31_00915 PF03976 Polyphosphate kinase 2 (PPK2) ISN31_00925 PF00994 Probable molybdopterin binding domain ISN31_00930 PF01341 Glycosyl hydrolases family 6 ISN31_00930 PF00553 Cellulose binding domain ISN31_00930 PF00041 Fibronectin type III domain ISN31_00945 PF13276 HTH-like domain ISN31_00945 PF00665 Integrase core domain ISN31_00945 PF13333 Integrase core domain ISN31_01020 PF15457 Type III T3SS secreted effector HopW1-1/HopPmaA ISN31_01025 PF01301 Glycosyl hydrolases family 35 ISN31_01035 PF17678 Glycosyl hydrolase family 92 N-terminal domain ISN31_01035 PF07971 Glycosyl hydrolase family 92 ISN31_01055 PF14310 Fibronectin type III-like domain ISN31_01055 PF00933 Glycosyl hydrolase family 3 N terminal domain ISN31_01055 PF01915 Glycosyl hydrolase family 3 C-terminal domain ISN31_01055 PF07691 PA14 domain ISN31_01065 PF07691 PA14 domain ISN31_01065 PF02838 Glycosyl hydrolase family 20, domain 2 ISN31_01065 PF00728 Glycosyl hydrolase family 20, catalytic domain ISN31_01070 PF01476 LysM domain ISN31_01070 PF00704 Glycosyl hydrolases family 18 ISN31_01085 PF02685 Glucokinase ISN31_01095 PF04452 RNA methyltransferase ISN31_01100 PF00202 Aminotransferase class-III ISN31_01105 PF00293 NUDIX domain ISN31_01110 PF00459 Inositol monophosphatase family ISN31_01115 PF03819 MazG nucleotide pyrophosphohydrolase domain ISN31_01120 PF02694 Uncharacterised BCR, YnfA/UPF0060 family ISN31_01125 PF01145 SPFH domain / Band 7 family ISN31_01125 PF16200 C-terminal region of band_7 ISN31_01135 PF08669 Glycine cleavage T-protein C-terminal barrel domain ISN31_01135 PF01571 Aminomethyltransferase folate-binding domain ISN31_01140 PF01597 Glycine cleavage H-protein ISN31_01165 PF00732 GMC oxidoreductase ISN31_01165 PF05199 GMC oxidoreductase ISN31_01180 PF00067 Cytochrome P450 ISN31_01185 PF00067 Cytochrome P450 ISN31_01190 PF00067 Cytochrome P450 ISN31_01205 PF00067 Cytochrome P450 ISN31_01210 PF00348 Polyprenyl synthetase ISN31_01225 PF01070 FMN-dependent dehydrogenase ISN31_01230 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ISN31_01230 PF02770 Acyl-CoA dehydrogenase, middle domain ISN31_01230 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ISN31_01230 PF09317 Domain of unknown function (DUF1974) ISN31_01240 PF00440 Bacterial regulatory proteins, tetR family ISN31_01245 PF07715 TonB-dependent Receptor Plug Domain ISN31_01245 PF00593 TonB dependent receptor ISN31_01255 PF01430 Hsp33 protein ISN31_01260 PF00912 Transglycosylase ISN31_01265 PF00535 Glycosyl transferase family 2 ISN31_01270 PF00571 CBS domain ISN31_01275 PF05170 AsmA family ISN31_01280 PF03006 Haemolysin-III related ISN31_01285 PF00009 Elongation factor Tu GTP binding domain ISN31_01285 PF16658 Class II release factor RF3, C-terminal domain ISN31_01295 PF00561 alpha/beta hydrolase fold ISN31_01300 PF01053 Cys/Met metabolism PLP-dependent enzyme ISN31_01305 PF00742 Homoserine dehydrogenase ISN31_01305 PF03447 Homoserine dehydrogenase, NAD binding domain ISN31_01305 PF00696 Amino acid kinase family ISN31_01310 PF00561 alpha/beta hydrolase fold ISN31_01310 PF08386 TAP-like protein ISN31_01315 PF00990 Diguanylate cyclase, GGDEF domain ISN31_01320 PF03315 Serine dehydratase beta chain ISN31_01320 PF03313 Serine dehydratase alpha chain ISN31_01335 PF01292 Prokaryotic cytochrome b561 ISN31_01345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN31_01345 PF00672 HAMP domain ISN31_01345 PF00072 Response regulator receiver domain ISN31_01345 PF00512 His Kinase A (phospho-acceptor) domain ISN31_01345 PF01627 Hpt domain ISN31_01345 PF17149 Periplasmic sensor domain found in signal transduction proteins ISN31_01350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN31_01350 PF17149 Periplasmic sensor domain found in signal transduction proteins ISN31_01350 PF00672 HAMP domain ISN31_01350 PF00512 His Kinase A (phospho-acceptor) domain ISN31_01350 PF01627 Hpt domain ISN31_01350 PF00072 Response regulator receiver domain ISN31_01355 PF07690 Major Facilitator Superfamily ISN31_01360 PF01208 Uroporphyrinogen decarboxylase (URO-D) ISN31_01370 PF13533 Biotin-lipoyl like ISN31_01375 PF00873 AcrB/AcrD/AcrF family ISN31_01380 PF02321 Outer membrane efflux protein ISN31_01385 PF01761 3-dehydroquinate synthase ISN31_01390 PF01202 Shikimate kinase ISN31_01395 PF01243 Pyridoxamine 5'-phosphate oxidase ISN31_01395 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ISN31_01400 PF00583 Acetyltransferase (GNAT) family ISN31_01415 PF09278 MerR, DNA binding ISN31_01415 PF00376 MerR family regulatory protein ISN31_01425 PF03807 NADP oxidoreductase coenzyme F420-dependent ISN31_01425 PF14748 Pyrroline-5-carboxylate reductase dimerisation ISN31_01435 PF01168 Alanine racemase, N-terminal domain ISN31_01440 PF00437 Type II/IV secretion system protein ISN31_01445 PF00437 Type II/IV secretion system protein ISN31_01450 PF13302 Acetyltransferase (GNAT) domain ISN31_01450 PF00958 GMP synthase C terminal domain ISN31_01450 PF00117 Glutamine amidotransferase class-I ISN31_01450 PF03352 Methyladenine glycosylase ISN31_01450 PF13673 Acetyltransferase (GNAT) domain ISN31_01460 PF02622 Uncharacterized ACR, COG1678 ISN31_01465 PF03652 Holliday junction resolvase ISN31_01470 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ISN31_01470 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ISN31_01485 PF00672 HAMP domain ISN31_01485 PF02203 Tar ligand binding domain homologue ISN31_01485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN31_01495 PF00324 Amino acid permease ISN31_01500 PF03600 Citrate transporter ISN31_01515 PF03448 MgtE intracellular N domain ISN31_01515 PF01769 Divalent cation transporter ISN31_01515 PF00571 CBS domain ISN31_01520 PF00391 PEP-utilising enzyme, mobile domain ISN31_01520 PF02896 PEP-utilising enzyme, TIM barrel domain ISN31_01520 PF05524 PEP-utilising enzyme, N-terminal ISN31_01525 PF00381 PTS HPr component phosphorylation site ISN31_01535 PF03668 P-loop ATPase protein family ISN31_01540 PF07475 HPr Serine kinase C-terminal domain ISN31_01540 PF02603 HPr Serine kinase N terminus ISN31_01545 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ISN31_01550 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ISN31_01555 PF00309 Sigma-54 factor, Activator interacting domain (AID) ISN31_01555 PF04963 Sigma-54 factor, core binding domain ISN31_01555 PF04552 Sigma-54, DNA binding domain ISN31_01560 PF00005 ABC transporter ISN31_01580 PF00571 CBS domain ISN31_01580 PF01380 SIS domain ISN31_01590 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ISN31_01620 PF00551 Formyl transferase ISN31_01635 PF00586 AIR synthase related protein, N-terminal domain ISN31_01635 PF02769 AIR synthase related protein, C-terminal domain ISN31_01645 PF01594 AI-2E family transporter ISN31_01650 PF00308 Bacterial dnaA protein ISN31_01655 PF00483 Nucleotidyl transferase ISN31_01660 PF01636 Phosphotransferase enzyme family ISN31_01685 PF00486 Transcriptional regulatory protein, C terminal ISN31_01685 PF00072 Response regulator receiver domain ISN31_01700 PF02424 ApbE family ISN31_01720 PF18331 PKHD-type hydroxylase C-terminal domain ISN31_01720 PF13640 2OG-Fe(II) oxygenase superfamily ISN31_01725 PF00593 TonB dependent receptor ISN31_01725 PF07715 TonB-dependent Receptor Plug Domain ISN31_01730 PF00355 Rieske [2Fe-2S] domain ISN31_01740 PF00266 Aminotransferase class-V ISN31_01745 PF01458 Uncharacterized protein family (UPF0051) ISN31_01750 PF00005 ABC transporter ISN31_01755 PF01458 Uncharacterized protein family (UPF0051) ISN31_01770 PF01965 DJ-1/PfpI family ISN31_01785 PF01476 LysM domain ISN31_01785 PF08525 Opacity-associated protein A N-terminal motif ISN31_01785 PF01551 Peptidase family M23 ISN31_01800 PF02566 OsmC-like protein ISN31_01810 PF02567 Phenazine biosynthesis-like protein ISN31_01815 PF01842 ACT domain ISN31_01815 PF00696 Amino acid kinase family ISN31_01830 PF08245 Mur ligase middle domain ISN31_01840 PF00348 Polyprenyl synthetase ISN31_01845 PF00436 Single-strand binding protein family ISN31_01850 PF13657 HipA N-terminal domain ISN31_01850 PF07804 HipA-like C-terminal domain ISN31_01865 PF00854 POT family ISN31_01870 PF03169 OPT oligopeptide transporter protein ISN31_01875 PF00326 Prolyl oligopeptidase family ISN31_01875 PF07676 WD40-like Beta Propeller Repeat ISN31_01875 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region ISN31_01895 PF13419 Haloacid dehalogenase-like hydrolase ISN31_01900 PF04328 Selenoprotein, putative ISN31_01905 PF13722 5TM C-terminal transporter carbon starvation CstA ISN31_01905 PF02554 Carbon starvation protein CstA ISN31_01920 PF04493 Endonuclease V ISN31_01925 PF00300 Histidine phosphatase superfamily (branch 1) ISN31_01935 PF07944 Beta-L-arabinofuranosidase, GH127 ISN31_01960 PF00072 Response regulator receiver domain ISN31_01960 PF01339 CheB methylesterase ISN31_01965 PF03705 CheR methyltransferase, all-alpha domain ISN31_01965 PF01739 CheR methyltransferase, SAM binding domain ISN31_01970 PF01590 GAF domain ISN31_01970 PF00990 Diguanylate cyclase, GGDEF domain ISN31_01970 PF00360 Phytochrome region ISN31_01970 PF00563 EAL domain ISN31_01975 PF01584 CheW-like domain ISN31_01980 PF00672 HAMP domain ISN31_01980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN31_01980 PF12729 Four helix bundle sensory module for signal transduction ISN31_01985 PF00672 HAMP domain ISN31_01985 PF02203 Tar ligand binding domain homologue ISN31_01985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN31_01990 PF02203 Tar ligand binding domain homologue ISN31_01990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN31_01990 PF00672 HAMP domain ISN31_01995 PF01627 Hpt domain ISN31_01995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN31_01995 PF02895 Signal transducing histidine kinase, homodimeric domain ISN31_01995 PF01584 CheW-like domain ISN31_02005 PF00270 DEAD/DEAH box helicase ISN31_02005 PF03461 TRCF domain ISN31_02005 PF02559 CarD-like/TRCF domain ISN31_02005 PF17757 UvrB interaction domain ISN31_02005 PF00271 Helicase conserved C-terminal domain ISN31_02025 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ ISN31_02035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN31_02035 PF00512 His Kinase A (phospho-acceptor) domain ISN31_02035 PF00672 HAMP domain ISN31_02065 PF00749 tRNA synthetases class I (E and Q), catalytic domain ISN31_02070 PF01475 Ferric uptake regulator family ISN31_02075 PF07690 Major Facilitator Superfamily ISN31_02090 PF00561 alpha/beta hydrolase fold ISN31_02100 PF12804 MobA-like NTP transferase domain ISN31_02105 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ISN31_02105 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ISN31_02110 PF03450 CO dehydrogenase flavoprotein C-terminal domain ISN31_02110 PF00941 FAD binding domain in molybdopterin dehydrogenase ISN31_02115 PF10518 TAT (twin-arginine translocation) pathway signal sequence ISN31_02115 PF01799 [2Fe-2S] binding domain ISN31_02115 PF00111 2Fe-2S iron-sulfur cluster binding domain ISN31_02130 PF07715 TonB-dependent Receptor Plug Domain ISN31_02130 PF00593 TonB dependent receptor ISN31_02145 PF08240 Alcohol dehydrogenase GroES-like domain ISN31_02145 PF00107 Zinc-binding dehydrogenase ISN31_02150 PF00654 Voltage gated chloride channel ISN31_02160 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ISN31_02160 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ISN31_02165 PF02805 Metal binding domain of Ada ISN31_02165 PF06029 AlkA N-terminal domain ISN31_02165 PF00730 HhH-GPD superfamily base excision DNA repair protein ISN31_02165 PF12833 Helix-turn-helix domain ISN31_02215 PF00271 Helicase conserved C-terminal domain ISN31_02215 PF00270 DEAD/DEAH box helicase ISN31_02215 PF03880 DbpA RNA binding domain ISN31_02220 PF00849 RNA pseudouridylate synthase ISN31_02220 PF01479 S4 domain ISN31_02225 PF00990 Diguanylate cyclase, GGDEF domain ISN31_02235 PF03812 2-keto-3-deoxygluconate permease ISN31_02245 PF03737 Aldolase/RraA ISN31_02250 PF00144 Beta-lactamase ISN31_02265 PF00005 ABC transporter ISN31_02265 PF00664 ABC transporter transmembrane region ISN31_02285 PF03466 LysR substrate binding domain ISN31_02285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISN31_02325 PF03653 Uncharacterised protein family (UPF0093) ISN31_02335 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ISN31_02340 PF14579 Helix-hairpin-helix motif ISN31_02340 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ISN31_02340 PF01336 OB-fold nucleic acid binding domain ISN31_02340 PF02811 PHP domain ISN31_02340 PF07733 Bacterial DNA polymerase III alpha NTPase domain ISN31_02345 PF01351 Ribonuclease HII ISN31_02350 PF02684 Lipid-A-disaccharide synthetase ISN31_02355 PF00132 Bacterial transferase hexapeptide (six repeats) ISN31_02355 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ISN31_02360 PF07977 FabA-like domain ISN31_02365 PF00132 Bacterial transferase hexapeptide (six repeats) ISN31_02365 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ISN31_02370 PF01103 Surface antigen ISN31_02370 PF07244 Surface antigen variable number repeat ISN31_02375 PF02163 Peptidase family M50 ISN31_02375 PF17820 PDZ domain ISN31_02380 PF13288 DXP reductoisomerase C-terminal domain ISN31_02380 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ISN31_02380 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ISN31_02390 PF01255 Putative undecaprenyl diphosphate synthase ISN31_02395 PF01765 Ribosome recycling factor ISN31_02400 PF00696 Amino acid kinase family ISN31_02405 PF00990 Diguanylate cyclase, GGDEF domain ISN31_02410 PF00889 Elongation factor TS ISN31_02415 PF00318 Ribosomal protein S2 ISN31_02450 PF00557 Metallopeptidase family M24 ISN31_02455 PF01909 Nucleotidyltransferase domain ISN31_02455 PF01966 HD domain ISN31_02455 PF08335 GlnD PII-uridylyltransferase ISN31_02460 PF14602 Hexapeptide repeat of succinyl-transferase ISN31_02460 PF00132 Bacterial transferase hexapeptide (six repeats) ISN31_02460 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal ISN31_02465 PF03960 ArsC family ISN31_02470 PF07687 Peptidase dimerisation domain ISN31_02470 PF01546 Peptidase family M20/M25/M40 ISN31_02480 PF00733 Asparagine synthase ISN31_02480 PF13537 Glutamine amidotransferase domain ISN31_02490 PF01804 Penicillin amidase ISN31_02495 PF00210 Ferritin-like domain ISN31_02500 PF03989 DNA gyrase C-terminal domain, beta-propeller ISN31_02500 PF00521 DNA gyrase/topoisomerase IV, subunit A ISN31_02510 PF02321 Outer membrane efflux protein ISN31_02515 PF00529 HlyD membrane-fusion protein of T1SS ISN31_02515 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISN31_02520 PF07690 Major Facilitator Superfamily ISN31_02545 PF06903 VirK protein ISN31_02555 PF00575 S1 RNA binding domain ISN31_02555 PF00773 RNB domain ISN31_02555 PF08461 Ribonuclease R winged-helix domain ISN31_02555 PF08206 Ribonuclease B OB domain ISN31_02555 PF17876 Cold shock domain ISN31_02565 PF00588 SpoU rRNA Methylase family ISN31_02565 PF08032 RNA 2'-O ribose methyltransferase substrate binding ISN31_02575 PF00929 Exonuclease ISN31_02585 PF05114 Protein of unknown function (DUF692) ISN31_02595 PF01895 PhoU domain ISN31_02600 PF00005 ABC transporter ISN31_02605 PF00528 Binding-protein-dependent transport system inner membrane component ISN31_02610 PF00528 Binding-protein-dependent transport system inner membrane component ISN31_02615 PF12849 PBP superfamily domain ISN31_02620 PF12849 PBP superfamily domain ISN31_02625 PF07396 Phosphate-selective porin O and P ISN31_02635 PF00484 Carbonic anhydrase ISN31_02640 PF00916 Sulfate permease family ISN31_02640 PF01740 STAS domain ISN31_02645 PF10576 Iron-sulfur binding domain of endonuclease III ISN31_02645 PF00633 Helix-hairpin-helix motif ISN31_02645 PF00730 HhH-GPD superfamily base excision DNA repair protein ISN31_02655 PF00378 Enoyl-CoA hydratase/isomerase ISN31_02660 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ISN31_02660 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISN31_02665 PF00293 NUDIX domain ISN31_02670 PF00581 Rhodanese-like domain ISN31_02705 PF02926 THUMP domain ISN31_02705 PF10672 S-adenosylmethionine-dependent methyltransferase ISN31_02705 PF01170 Putative RNA methylase family UPF0020 ISN31_02710 PF00072 Response regulator receiver domain ISN31_02715 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ISN31_02715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN31_02715 PF00672 HAMP domain ISN31_02715 PF00072 Response regulator receiver domain ISN31_02715 PF01627 Hpt domain ISN31_02715 PF00512 His Kinase A (phospho-acceptor) domain ISN31_02720 PF04286 Protein of unknown function (DUF445) ISN31_02735 PF00171 Aldehyde dehydrogenase family ISN31_02740 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ISN31_02740 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ISN31_02745 PF00202 Aminotransferase class-III ISN31_02750 PF07883 Cupin domain ISN31_02750 PF01381 Helix-turn-helix ISN31_02755 PF00171 Aldehyde dehydrogenase family ISN31_02775 PF07690 Major Facilitator Superfamily ISN31_02780 PF02634 FdhD/NarQ family ISN31_02785 PF00384 Molybdopterin oxidoreductase ISN31_02800 PF00818 Ice nucleation protein repeat ISN31_02805 PF07690 Major Facilitator Superfamily ISN31_02805 PF00083 Sugar (and other) transporter ISN31_02810 PF00990 Diguanylate cyclase, GGDEF domain ISN31_02810 PF17151 Periplasmic sensor domain ISN31_02815 PF01266 FAD dependent oxidoreductase ISN31_02820 PF00120 Glutamine synthetase, catalytic domain ISN31_02825 PF07722 Peptidase C26 ISN31_02830 PF00120 Glutamine synthetase, catalytic domain ISN31_02835 PF00202 Aminotransferase class-III ISN31_02840 PF13416 Bacterial extracellular solute-binding protein ISN31_02850 PF13533 Biotin-lipoyl like ISN31_02855 PF07690 Major Facilitator Superfamily ISN31_02860 PF02321 Outer membrane efflux protein ISN31_02865 PF00005 ABC transporter ISN31_02865 PF08402 TOBE domain ISN31_02870 PF00528 Binding-protein-dependent transport system inner membrane component ISN31_02875 PF00528 Binding-protein-dependent transport system inner membrane component ISN31_02885 PF00171 Aldehyde dehydrogenase family ISN31_02900 PF03471 Transporter associated domain ISN31_02900 PF00571 CBS domain ISN31_02910 PF02130 Uncharacterized protein family UPF0054 ISN31_02915 PF02562 PhoH-like protein ISN31_02920 PF04055 Radical SAM superfamily ISN31_02920 PF01938 TRAM domain ISN31_02920 PF00919 Uncharacterized protein family UPF0004 ISN31_02925 PF02798 Glutathione S-transferase, N-terminal domain ISN31_02925 PF00043 Glutathione S-transferase, C-terminal domain ISN31_02930 PF01464 Transglycosylase SLT domain ISN31_02935 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal ISN31_02935 PF00355 Rieske [2Fe-2S] domain ISN31_02940 PF00033 Cytochrome b/b6/petB ISN31_02940 PF00032 Cytochrome b(C-terminal)/b6/petD ISN31_02950 PF02167 Cytochrome C1 family ISN31_02955 PF00043 Glutathione S-transferase, C-terminal domain ISN31_02955 PF02798 Glutathione S-transferase, N-terminal domain ISN31_02960 PF04386 Stringent starvation protein B ISN31_02975 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ISN31_02975 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ISN31_02985 PF00731 AIR carboxylase ISN31_02990 PF02222 ATP-grasp domain ISN31_02990 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ISN31_02995 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ISN31_02995 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ISN31_03000 PF00462 Glutaredoxin ISN31_03005 PF00106 short chain dehydrogenase ISN31_03010 PF01914 MarC family integral membrane protein ISN31_03015 PF00593 TonB dependent receptor ISN31_03020 PF03641 Possible lysine decarboxylase ISN31_03020 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases ISN31_03020 PF11892 Domain of unknown function (DUF3412) ISN31_03025 PF07694 5TMR of 5TMR-LYT ISN31_03025 PF06580 Histidine kinase ISN31_03030 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor ISN31_03030 PF07963 Prokaryotic N-terminal methylation motif ISN31_03050 PF05567 Neisseria PilC beta-propeller domain ISN31_03055 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor ISN31_03055 PF07963 Prokaryotic N-terminal methylation motif ISN31_03070 PF04851 Type III restriction enzyme, res subunit ISN31_03070 PF00271 Helicase conserved C-terminal domain ISN31_03070 PF17757 UvrB interaction domain ISN31_03070 PF02151 UvrB/uvrC motif ISN31_03070 PF12344 Ultra-violet resistance protein B ISN31_03095 PF04335 VirB8 protein ISN31_03105 PF03743 Bacterial conjugation TrbI-like protein ISN31_03110 PF00437 Type II/IV secretion system protein ISN31_03115 PF01464 Transglycosylase SLT domain ISN31_03125 PF05101 Type IV secretory pathway, VirB3-like protein ISN31_03130 PF03135 CagE, TrbE, VirB family, component of type IV transporter system ISN31_03200 PF03129 Anticodon binding domain ISN31_03200 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ISN31_03200 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ISN31_03200 PF02824 TGS domain ISN31_03205 PF05198 Translation initiation factor IF-3, N-terminal domain ISN31_03205 PF00707 Translation initiation factor IF-3, C-terminal domain ISN31_03210 PF01632 Ribosomal protein L35 ISN31_03215 PF00453 Ribosomal protein L20 ISN31_03220 PF01409 tRNA synthetases class II core domain (F) ISN31_03220 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ISN31_03225 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ISN31_03225 PF01588 Putative tRNA binding domain ISN31_03225 PF03147 Ferredoxin-fold anticodon binding domain ISN31_03225 PF03484 tRNA synthetase B5 domain ISN31_03225 PF03483 B3/4 domain ISN31_03230 PF00216 Bacterial DNA-binding protein ISN31_03235 PF13411 MerR HTH family regulatory protein ISN31_03400 PF03796 DnaB-like helicase C terminal domain ISN31_03400 PF00772 DnaB-like helicase N terminal domain ISN31_03415 PF00145 C-5 cytosine-specific DNA methylase ISN31_03475 PF03592 Terminase small subunit ISN31_03475 PF10668 Phage terminase small subunit ISN31_03555 PF06791 Prophage tail length tape measure protein ISN31_03625 PF02397 Bacterial sugar transferase ISN31_03640 PF13439 Glycosyltransferase Family 4 ISN31_03640 PF00534 Glycosyl transferases group 1 ISN31_03650 PF14667 Polysaccharide biosynthesis C-terminal domain ISN31_03665 PF03808 Glycosyl transferase WecB/TagA/CpsF family ISN31_03675 PF02779 Transketolase, pyrimidine binding domain ISN31_03675 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ISN31_03675 PF02780 Transketolase, C-terminal domain ISN31_03685 PF12806 Acetyl-CoA dehydrogenase C-terminal like ISN31_03685 PF02770 Acyl-CoA dehydrogenase, middle domain ISN31_03685 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ISN31_03685 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ISN31_03720 PF13742 OB-fold nucleic acid binding domain ISN31_03720 PF02601 Exonuclease VII, large subunit ISN31_03725 PF08331 Domain of unknown function (DUF1730) ISN31_03730 PF03853 YjeF-related protein N-terminus ISN31_03730 PF01256 Carbohydrate kinase ISN31_03735 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ISN31_03740 PF11741 AMIN domain ISN31_03740 PF01520 N-acetylmuramoyl-L-alanine amidase ISN31_03745 PF08676 MutL C terminal dimerisation domain ISN31_03745 PF01119 DNA mismatch repair protein, C-terminal domain ISN31_03760 PF05233 PHB accumulation regulatory domain ISN31_03760 PF07879 PHB/PHA accumulation regulator DNA-binding domain ISN31_03765 PF00106 short chain dehydrogenase ISN31_03770 PF00749 tRNA synthetases class I (E and Q), catalytic domain ISN31_03775 PF01435 Peptidase family M48 ISN31_03780 PF00563 EAL domain ISN31_03780 PF00072 Response regulator receiver domain ISN31_03780 PF00990 Diguanylate cyclase, GGDEF domain ISN31_03790 PF07152 YaeQ protein ISN31_03795 PF00849 RNA pseudouridylate synthase ISN31_03800 PF00313 'Cold-shock' DNA-binding domain ISN31_03805 PF02798 Glutathione S-transferase, N-terminal domain ISN31_03805 PF00043 Glutathione S-transferase, C-terminal domain ISN31_03810 PF07859 alpha/beta hydrolase fold ISN31_03815 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ISN31_03825 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISN31_03825 PF00529 HlyD membrane-fusion protein of T1SS ISN31_03830 PF00873 AcrB/AcrD/AcrF family ISN31_03835 PF00156 Phosphoribosyl transferase domain ISN31_03840 PF00270 DEAD/DEAH box helicase ISN31_03840 PF03880 DbpA RNA binding domain ISN31_03840 PF00271 Helicase conserved C-terminal domain ISN31_03845 PF16326 ABC transporter C-terminal domain ISN31_03845 PF00005 ABC transporter ISN31_03845 PF12848 ABC transporter ISN31_03855 PF00545 ribonuclease ISN31_03860 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ISN31_03860 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ISN31_03870 PF01915 Glycosyl hydrolase family 3 C-terminal domain ISN31_03870 PF00933 Glycosyl hydrolase family 3 N terminal domain ISN31_03870 PF14310 Fibronectin type III-like domain ISN31_03880 PF00854 POT family ISN31_03910 PF01047 MarR family ISN31_03925 PF00255 Glutathione peroxidase ISN31_03930 PF00970 Oxidoreductase FAD-binding domain ISN31_03930 PF00175 Oxidoreductase NAD-binding domain ISN31_03940 PF00005 ABC transporter ISN31_03960 PF05683 Fumarase C-terminus ISN31_03960 PF05681 Fumarate hydratase (Fumerase) ISN31_03975 PF02253 Phospholipase A1 ISN31_03985 PF00313 'Cold-shock' DNA-binding domain ISN31_04000 PF00899 ThiF family ISN31_04005 PF01026 TatD related DNase ISN31_04020 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ISN31_04020 PF02770 Acyl-CoA dehydrogenase, middle domain ISN31_04020 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ISN31_04025 PF03358 NADPH-dependent FMN reductase ISN31_04030 PF00772 DnaB-like helicase N terminal domain ISN31_04030 PF03796 DnaB-like helicase C terminal domain ISN31_04035 PF03441 FAD binding domain of DNA photolyase ISN31_04035 PF00875 DNA photolyase ISN31_04040 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain ISN31_04040 PF06974 Protein of unknown function (DUF1298) ISN31_04045 PF05736 OprF membrane domain ISN31_04045 PF00691 OmpA family ISN31_04050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISN31_04050 PF03466 LysR substrate binding domain ISN31_04065 PF00529 HlyD membrane-fusion protein of T1SS ISN31_04065 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISN31_04070 PF00873 AcrB/AcrD/AcrF family ISN31_04075 PF00106 short chain dehydrogenase ISN31_04080 PF02321 Outer membrane efflux protein ISN31_04105 PF00082 Subtilase family ISN31_04110 PF01668 SmpB protein ISN31_04115 PF03364 Polyketide cyclase / dehydrase and lipid transport ISN31_04120 PF03658 RnfH family Ubiquitin ISN31_04125 PF04355 SmpA / OmlA family ISN31_04130 PF01475 Ferric uptake regulator family ISN31_04135 PF02463 RecF/RecN/SMC N terminal domain ISN31_04140 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding ISN31_04140 PF01628 HrcA protein C terminal domain ISN31_04145 PF01025 GrpE ISN31_04150 PF00012 Hsp70 protein ISN31_04155 PF01556 DnaJ C terminal domain ISN31_04155 PF00226 DnaJ domain ISN31_04155 PF00684 DnaJ central domain ISN31_04160 PF08543 Phosphomethylpyrimidine kinase ISN31_04165 PF02153 Prephenate dehydrogenase ISN31_04165 PF01817 Chorismate mutase type II ISN31_04175 PF00664 ABC transporter transmembrane region ISN31_04175 PF00005 ABC transporter ISN31_04180 PF01205 Uncharacterized protein family UPF0029 ISN31_04190 PF08281 Sigma-70, region 4 ISN31_04190 PF04542 Sigma-70 region 2 ISN31_04195 PF00990 Diguanylate cyclase, GGDEF domain ISN31_04195 PF03707 Bacterial signalling protein N terminal repeat ISN31_04195 PF00563 EAL domain ISN31_04200 PF03641 Possible lysine decarboxylase ISN31_04205 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISN31_04205 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISN31_04210 PF02817 e3 binding domain ISN31_04210 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ISN31_04210 PF00364 Biotin-requiring enzyme ISN31_04215 PF02779 Transketolase, pyrimidine binding domain ISN31_04215 PF16870 2-oxoglutarate dehydrogenase C-terminal ISN31_04215 PF16078 2-oxoglutarate dehydrogenase N-terminus ISN31_04215 PF00676 Dehydrogenase E1 component ISN31_04225 PF08007 Cupin superfamily protein ISN31_04240 PF08328 Adenylosuccinate lyase C-terminal ISN31_04240 PF00206 Lyase ISN31_04250 PF00206 Lyase ISN31_04250 PF10415 Fumarase C C-terminus ISN31_04260 PF04362 Bacterial Fe(2+) trafficking ISN31_04265 PF00633 Helix-hairpin-helix motif ISN31_04265 PF00730 HhH-GPD superfamily base excision DNA repair protein ISN31_04265 PF14815 NUDIX domain ISN31_04265 PF10576 Iron-sulfur binding domain of endonuclease III ISN31_04270 PF00448 SRP54-type protein, GTPase domain ISN31_04270 PF02881 SRP54-type protein, helical bundle domain ISN31_04280 PF05544 Proline racemase ISN31_04285 PF01266 FAD dependent oxidoreductase ISN31_04295 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISN31_04295 PF17806 Sarcosine oxidase A3 domain ISN31_04300 PF00701 Dihydrodipicolinate synthetase family ISN31_04305 PF00171 Aldehyde dehydrogenase family ISN31_04310 PF00557 Metallopeptidase family M24 ISN31_04310 PF01321 Creatinase/Prolidase N-terminal domain ISN31_04325 PF13520 Amino acid permease ISN31_04350 PF00593 TonB dependent receptor ISN31_04350 PF07715 TonB-dependent Receptor Plug Domain ISN31_04355 PF07532 Bacterial Ig-like domain (group 4) ISN31_04360 PF04616 Glycosyl hydrolases family 43 ISN31_04365 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region ISN31_04365 PF00326 Prolyl oligopeptidase family ISN31_04370 PF00593 TonB dependent receptor ISN31_04370 PF07715 TonB-dependent Receptor Plug Domain ISN31_04380 PF00593 TonB dependent receptor ISN31_04380 PF07715 TonB-dependent Receptor Plug Domain ISN31_04385 PF02615 Malate/L-lactate dehydrogenase ISN31_04390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN31_04390 PF00183 Hsp90 protein ISN31_04400 PF01467 Cytidylyltransferase-like ISN31_04410 PF00037 4Fe-4S binding domain ISN31_04420 PF00753 Metallo-beta-lactamase superfamily ISN31_04425 PF00759 Glycosyl hydrolase family 9 ISN31_04425 PF02927 Cellulase N-terminal ig-like domain ISN31_04440 PF00202 Aminotransferase class-III ISN31_04450 PF02547 Queuosine biosynthesis protein ISN31_04455 PF01702 Queuine tRNA-ribosyltransferase ISN31_04460 PF02699 Preprotein translocase subunit ISN31_04465 PF02355 Protein export membrane protein ISN31_04465 PF07549 SecD/SecF GG Motif ISN31_04465 PF13721 SecD export protein N-terminal TM region ISN31_04470 PF07549 SecD/SecF GG Motif ISN31_04470 PF02355 Protein export membrane protein ISN31_04475 PF00459 Inositol monophosphatase family ISN31_04480 PF00588 SpoU rRNA Methylase family ISN31_04490 PF00563 EAL domain ISN31_04490 PF01590 GAF domain ISN31_04490 PF00360 Phytochrome region ISN31_04490 PF00990 Diguanylate cyclase, GGDEF domain ISN31_04495 PF04055 Radical SAM superfamily ISN31_04500 PF01132 Elongation factor P (EF-P) OB domain ISN31_04500 PF09285 Elongation factor P, C-terminal ISN31_04500 PF08207 Elongation factor P (EF-P) KOW-like domain ISN31_04505 PF06736 Protein of unknown function (DUF1211) ISN31_04510 PF01979 Amidohydrolase family ISN31_04520 PF13419 Haloacid dehalogenase-like hydrolase ISN31_04535 PF00295 Glycosyl hydrolases family 28 ISN31_04540 PF01095 Pectinesterase ISN31_04550 PF01551 Peptidase family M23 ISN31_04550 PF08460 Bacterial SH3 domain ISN31_04555 PF01979 Amidohydrolase family ISN31_04560 PF01809 Putative membrane protein insertion efficiency factor ISN31_04565 PF01258 Prokaryotic dksA/traR C4-type zinc finger ISN31_04575 PF00561 alpha/beta hydrolase fold ISN31_04585 PF02657 Fe-S metabolism associated domain ISN31_04590 PF01406 tRNA synthetases class I (C) catalytic domain ISN31_04590 PF09190 DALR domain ISN31_04600 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ISN31_04600 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ISN31_04605 PF00764 Arginosuccinate synthase ISN31_04610 PF07687 Peptidase dimerisation domain ISN31_04610 PF01546 Peptidase family M20/M25/M40 ISN31_04615 PF00696 Amino acid kinase family ISN31_04615 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase ISN31_04625 PF01118 Semialdehyde dehydrogenase, NAD binding domain ISN31_04630 PF00206 Lyase ISN31_04645 PF00696 Amino acid kinase family ISN31_04645 PF01472 PUA domain ISN31_04650 PF00171 Aldehyde dehydrogenase family ISN31_04680 PF01055 Glycosyl hydrolases family 31 ISN31_04680 PF16338 Domain of unknown function (DUF4968) ISN31_04680 PF17137 Domain of unknown function (DUF5110) ISN31_04690 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISN31_04690 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISN31_04700 PF00083 Sugar (and other) transporter ISN31_04705 PF11741 AMIN domain ISN31_04705 PF01520 N-acetylmuramoyl-L-alanine amidase ISN31_04710 PF02649 Type I GTP cyclohydrolase folE2 ISN31_04715 PF00132 Bacterial transferase hexapeptide (six repeats) ISN31_04725 PF12627 Probable RNA and SrmB- binding site of polymerase A ISN31_04725 PF12626 Polymerase A arginine-rich C-terminus ISN31_04725 PF01743 Poly A polymerase head domain ISN31_04730 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ISN31_04735 PF02548 Ketopantoate hydroxymethyltransferase ISN31_04740 PF02569 Pantoate-beta-alanine ligase ISN31_04745 PF02261 Aspartate decarboxylase ISN31_04750 PF00342 Phosphoglucose isomerase ISN31_04755 PF01915 Glycosyl hydrolase family 3 C-terminal domain ISN31_04755 PF00933 Glycosyl hydrolase family 3 N terminal domain ISN31_04755 PF14310 Fibronectin type III-like domain ISN31_04760 PF00474 Sodium:solute symporter family ISN31_04765 PF00990 Diguanylate cyclase, GGDEF domain ISN31_04765 PF03707 Bacterial signalling protein N terminal repeat ISN31_04765 PF00563 EAL domain ISN31_04770 PF00072 Response regulator receiver domain ISN31_04780 PF04551 GcpE protein ISN31_04785 PF01569 PAP2 superfamily ISN31_04810 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ISN31_04810 PF01565 FAD binding domain ISN31_04815 PF01180 Dihydroorotate dehydrogenase ISN31_04830 PF00171 Aldehyde dehydrogenase family ISN31_04845 PF13840 ACT domain ISN31_04845 PF01842 ACT domain ISN31_04845 PF00696 Amino acid kinase family ISN31_04845 PF00742 Homoserine dehydrogenase ISN31_04845 PF03447 Homoserine dehydrogenase, NAD binding domain ISN31_04850 PF00288 GHMP kinases N terminal domain ISN31_04850 PF08544 GHMP kinases C terminal ISN31_04855 PF13406 Transglycosylase SLT domain ISN31_04860 PF07519 Tannase and feruloyl esterase ISN31_04865 PF14821 Threonine synthase N terminus ISN31_04865 PF00291 Pyridoxal-phosphate dependent enzyme ISN31_04875 PF13545 Crp-like helix-turn-helix domain ISN31_04875 PF00027 Cyclic nucleotide-binding domain ISN31_04880 PF13393 Histidyl-tRNA synthetase ISN31_04880 PF03129 Anticodon binding domain ISN31_04890 PF01634 ATP phosphoribosyltransferase ISN31_04890 PF08029 HisG, C-terminal domain ISN31_04895 PF00815 Histidinol dehydrogenase ISN31_04900 PF00155 Aminotransferase class I and II ISN31_04905 PF00475 Imidazoleglycerol-phosphate dehydratase ISN31_04910 PF00117 Glutamine amidotransferase class-I ISN31_04915 PF00977 Histidine biosynthesis protein ISN31_04920 PF00977 Histidine biosynthesis protein ISN31_04925 PF01502 Phosphoribosyl-AMP cyclohydrolase ISN31_04925 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ISN31_04945 PF03079 ARD/ARD' family ISN31_04950 PF00596 Class II Aldolase and Adducin N-terminal domain ISN31_04955 PF13520 Amino acid permease ISN31_04960 PF13520 Amino acid permease ISN31_04975 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISN31_04975 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISN31_04980 PF02913 FAD linked oxidases, C-terminal domain ISN31_04980 PF01565 FAD binding domain ISN31_05000 PF01132 Elongation factor P (EF-P) OB domain ISN31_05000 PF08207 Elongation factor P (EF-P) KOW-like domain ISN31_05000 PF09285 Elongation factor P, C-terminal ISN31_05005 PF00106 short chain dehydrogenase ISN31_05010 PF00682 HMGL-like ISN31_05015 PF00378 Enoyl-CoA hydratase/isomerase ISN31_05025 PF07664 Ferrous iron transport protein B C terminus ISN31_05025 PF07670 Nucleoside recognition ISN31_05025 PF02421 Ferrous iron transport protein B ISN31_05055 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ISN31_05055 PF00128 Alpha amylase, catalytic domain ISN31_05060 PF17954 Quercetinase C-terminal cupin domain ISN31_05060 PF02678 Pirin ISN31_05065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISN31_05065 PF03466 LysR substrate binding domain ISN31_05085 PF08543 Phosphomethylpyrimidine kinase ISN31_05100 PF02562 PhoH-like protein ISN31_05100 PF13638 PIN domain ISN31_05105 PF00578 AhpC/TSA family ISN31_05115 PF00701 Dihydrodipicolinate synthetase family ISN31_05125 PF00037 4Fe-4S binding domain ISN31_05125 PF11953 Domain of unknown function (DUF3470) ISN31_05130 PF05035 2-keto-3-deoxy-galactonokinase ISN31_05135 PF08450 SMP-30/Gluconolactonase/LRE-like region ISN31_05140 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ISN31_05140 PF13378 Enolase C-terminal domain-like ISN31_05145 PF01081 KDPG and KHG aldolase ISN31_05150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISN31_05150 PF03466 LysR substrate binding domain ISN31_05170 PF01336 OB-fold nucleic acid binding domain ISN31_05170 PF00152 tRNA synthetases class II (D, K and N) ISN31_05175 PF00072 Response regulator receiver domain ISN31_05180 PF00072 Response regulator receiver domain ISN31_05180 PF01627 Hpt domain ISN31_05180 PF00512 His Kinase A (phospho-acceptor) domain ISN31_05180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN31_05185 PF00378 Enoyl-CoA hydratase/isomerase ISN31_05190 PF00501 AMP-binding enzyme ISN31_05190 PF13193 AMP-binding enzyme C-terminal domain ISN31_05200 PF00694 Aconitase C-terminal domain ISN31_05200 PF00330 Aconitase family (aconitate hydratase) ISN31_05215 PF11791 Aconitate B N-terminal domain ISN31_05215 PF06434 Aconitate hydratase 2 N-terminus ISN31_05215 PF00330 Aconitase family (aconitate hydratase) ISN31_05225 PF03707 Bacterial signalling protein N terminal repeat ISN31_05225 PF00990 Diguanylate cyclase, GGDEF domain ISN31_05225 PF00563 EAL domain ISN31_05230 PF01339 CheB methylesterase ISN31_05230 PF00072 Response regulator receiver domain ISN31_05235 PF03975 CheD chemotactic sensory transduction ISN31_05240 PF01739 CheR methyltransferase, SAM binding domain ISN31_05240 PF03705 CheR methyltransferase, all-alpha domain ISN31_05245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN31_05245 PF00672 HAMP domain ISN31_05255 PF00672 HAMP domain ISN31_05255 PF02203 Tar ligand binding domain homologue ISN31_05255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN31_05265 PF01584 CheW-like domain ISN31_05270 PF07317 Flagellar regulator YcgR ISN31_05270 PF07238 PilZ domain ISN31_05275 PF00672 HAMP domain ISN31_05275 PF02203 Tar ligand binding domain homologue ISN31_05275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN31_05285 PF00672 HAMP domain ISN31_05285 PF02203 Tar ligand binding domain homologue ISN31_05285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN31_05290 PF02203 Tar ligand binding domain homologue ISN31_05290 PF00672 HAMP domain ISN31_05290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN31_05295 PF02203 Tar ligand binding domain homologue ISN31_05295 PF00672 HAMP domain ISN31_05295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN31_05305 PF02203 Tar ligand binding domain homologue ISN31_05305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN31_05305 PF00672 HAMP domain ISN31_05315 PF00672 HAMP domain ISN31_05315 PF02203 Tar ligand binding domain homologue ISN31_05315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN31_05320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN31_05320 PF00672 HAMP domain ISN31_05320 PF02203 Tar ligand binding domain homologue ISN31_05325 PF02203 Tar ligand binding domain homologue ISN31_05325 PF00672 HAMP domain ISN31_05325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN31_05330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN31_05330 PF02203 Tar ligand binding domain homologue ISN31_05330 PF00672 HAMP domain ISN31_05340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN31_05340 PF02895 Signal transducing histidine kinase, homodimeric domain ISN31_05340 PF01627 Hpt domain ISN31_05340 PF01584 CheW-like domain ISN31_05340 PF09078 CheY binding ISN31_05345 PF00072 Response regulator receiver domain ISN31_05355 PF01584 CheW-like domain ISN31_05360 PF13614 AAA domain ISN31_05365 PF13677 Membrane MotB of proton-channel complex MotA/MotB ISN31_05365 PF00691 OmpA family ISN31_05370 PF01618 MotA/TolQ/ExbB proton channel family ISN31_05375 PF00072 Response regulator receiver domain ISN31_05375 PF01627 Hpt domain ISN31_05375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN31_05375 PF02895 Signal transducing histidine kinase, homodimeric domain ISN31_05375 PF01584 CheW-like domain ISN31_05380 PF04344 Chemotaxis phosphatase, CheZ ISN31_05385 PF00072 Response regulator receiver domain ISN31_05390 PF04542 Sigma-70 region 2 ISN31_05390 PF04545 Sigma-70, region 4 ISN31_05390 PF04539 Sigma-70 region 3 ISN31_05395 PF10609 NUBPL iron-transfer P-loop NTPase ISN31_05400 PF00448 SRP54-type protein, GTPase domain ISN31_05405 PF00771 FHIPEP family ISN31_05410 PF01312 FlhB HrpN YscU SpaS Family ISN31_05420 PF00990 Diguanylate cyclase, GGDEF domain ISN31_05425 PF01311 Bacterial export proteins, family 1 ISN31_05430 PF01313 Bacterial export proteins, family 3 ISN31_05435 PF00813 FliP family ISN31_05440 PF04347 Flagellar biosynthesis protein, FliO ISN31_05445 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ISN31_05450 PF02154 Flagellar motor switch protein FliM ISN31_05450 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ISN31_05470 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISN31_05470 PF18269 T3SS EscN ATPase C-terminal domain ISN31_05480 PF14842 FliG N-terminal domain ISN31_05480 PF01706 FliG C-terminal domain ISN31_05480 PF14841 FliG middle domain ISN31_05485 PF08345 Flagellar M-ring protein C-terminal ISN31_05485 PF01514 Secretory protein of YscJ/FliF family ISN31_05490 PF02049 Flagellar hook-basal body complex protein FliE ISN31_05495 PF00535 Glycosyl transferase family 2 ISN31_05495 PF00534 Glycosyl transferases group 1 ISN31_05545 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ISN31_05545 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ISN31_05555 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ISN31_05560 PF02954 Bacterial regulatory protein, Fis family ISN31_05560 PF00158 Sigma-54 interaction domain ISN31_05560 PF06490 Flagellar regulatory protein FleQ ISN31_05565 PF00072 Response regulator receiver domain ISN31_05565 PF01339 CheB methylesterase ISN31_05570 PF04552 Sigma-54, DNA binding domain ISN31_05570 PF04963 Sigma-54 factor, core binding domain ISN31_05570 PF00309 Sigma-54 factor, Activator interacting domain (AID) ISN31_05575 PF00072 Response regulator receiver domain ISN31_05575 PF00196 Bacterial regulatory proteins, luxR family ISN31_05590 PF02561 Flagellar protein FliS ISN31_05595 PF07195 Flagellar hook-associated protein 2 C-terminus ISN31_05595 PF02465 Flagellar hook-associated protein 2 N-terminus ISN31_05595 PF07196 Flagellin hook IN motif ISN31_05600 PF00700 Bacterial flagellin C-terminal helical region ISN31_05600 PF00669 Bacterial flagellin N-terminal helical region ISN31_05605 PF00669 Bacterial flagellin N-terminal helical region ISN31_05610 PF00460 Flagella basal body rod protein ISN31_05610 PF00460 Flagella basal body rod protein ISN31_05610 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISN31_05610 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISN31_05615 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ISN31_05615 PF10135 Rod binding protein ISN31_05620 PF02119 Flagellar P-ring protein ISN31_05625 PF02107 Flagellar L-ring protein ISN31_05630 PF00460 Flagella basal body rod protein ISN31_05630 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISN31_05635 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISN31_05635 PF00460 Flagella basal body rod protein ISN31_05640 PF00460 Flagella basal body rod protein ISN31_05640 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISN31_05640 PF07559 Flagellar basal body protein FlaE ISN31_05645 PF13860 FlgD Ig-like domain ISN31_05645 PF13861 FlgD Tudor-like domain ISN31_05645 PF03963 Flagellar hook capping protein - N-terminal region ISN31_05650 PF00460 Flagella basal body rod protein ISN31_05650 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISN31_05660 PF01584 CheW-like domain ISN31_05660 PF00072 Response regulator receiver domain ISN31_05680 PF00512 His Kinase A (phospho-acceptor) domain ISN31_05680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN31_05680 PF08448 PAS fold ISN31_05680 PF13188 PAS domain ISN31_05680 PF00072 Response regulator receiver domain ISN31_05685 PF03707 Bacterial signalling protein N terminal repeat ISN31_05685 PF00563 EAL domain ISN31_05685 PF00990 Diguanylate cyclase, GGDEF domain ISN31_05690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN31_05690 PF07730 Histidine kinase ISN31_05695 PF03707 Bacterial signalling protein N terminal repeat ISN31_05695 PF00563 EAL domain ISN31_05695 PF00990 Diguanylate cyclase, GGDEF domain ISN31_05705 PF00005 ABC transporter ISN31_05715 PF12729 Four helix bundle sensory module for signal transduction ISN31_05715 PF00672 HAMP domain ISN31_05715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN31_05720 PF04356 Protein of unknown function (DUF489) ISN31_05730 PF00293 NUDIX domain ISN31_05740 PF02617 ATP-dependent Clp protease adaptor protein ClpS ISN31_05745 PF02861 Clp amino terminal domain, pathogenicity island component ISN31_05745 PF17871 AAA lid domain ISN31_05745 PF07724 AAA domain (Cdc48 subfamily) ISN31_05745 PF00004 ATPase family associated with various cellular activities (AAA) ISN31_05745 PF10431 C-terminal, D2-small domain, of ClpB protein ISN31_05750 PF01176 Translation initiation factor 1A / IF-1 ISN31_05755 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ISN31_05765 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISN31_05770 PF01580 FtsK/SpoIIIE family ISN31_05770 PF09397 Ftsk gamma domain ISN31_05770 PF17854 FtsK alpha domain ISN31_05770 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ISN31_05780 PF03548 Outer membrane lipoprotein carrier protein LolA ISN31_05790 PF00004 ATPase family associated with various cellular activities (AAA) ISN31_05790 PF16193 AAA C-terminal domain ISN31_05790 PF12002 MgsA AAA+ ATPase C terminal ISN31_05795 PF00654 Voltage gated chloride channel ISN31_05810 PF03918 Cytochrome C biogenesis protein ISN31_05815 PF08534 Redoxin ISN31_05820 PF01578 Cytochrome C assembly protein ISN31_05820 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal ISN31_05825 PF03100 CcmE ISN31_05835 PF01578 Cytochrome C assembly protein ISN31_05840 PF00082 Subtilase family ISN31_05850 PF04542 Sigma-70 region 2 ISN31_05850 PF08281 Sigma-70, region 4 ISN31_05860 PF00034 Cytochrome c ISN31_05870 PF01292 Prokaryotic cytochrome b561 ISN31_05875 PF05523 WxcM-like, C-terminal ISN31_05895 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ISN31_05900 PF01943 Polysaccharide biosynthesis protein ISN31_05905 PF00535 Glycosyl transferase family 2 ISN31_05940 PF00534 Glycosyl transferases group 1 ISN31_05940 PF13439 Glycosyltransferase Family 4 ISN31_05945 PF13579 Glycosyl transferase 4-like domain ISN31_05945 PF00534 Glycosyl transferases group 1 ISN31_05965 PF00005 ABC transporter ISN31_05965 PF00664 ABC transporter transmembrane region ISN31_05985 PF01371 Trp repressor protein ISN31_05995 PF13333 Integrase core domain ISN31_05995 PF00665 Integrase core domain ISN31_05995 PF13276 HTH-like domain ISN31_06000 PF00501 AMP-binding enzyme ISN31_06005 PF03358 NADPH-dependent FMN reductase ISN31_06035 PF00117 Glutamine amidotransferase class-I ISN31_06040 PF00425 chorismate binding enzyme ISN31_06040 PF04715 Anthranilate synthase component I, N terminal region ISN31_06045 PF01527 Transposase ISN31_06050 PF13276 HTH-like domain ISN31_06050 PF13333 Integrase core domain ISN31_06050 PF00665 Integrase core domain ISN31_06055 PF00665 Integrase core domain ISN31_06055 PF13276 HTH-like domain ISN31_06055 PF13333 Integrase core domain ISN31_06065 PF00072 Response regulator receiver domain ISN31_06065 PF00196 Bacterial regulatory proteins, luxR family ISN31_06075 PF12111 Polyribonucleotide phosphorylase C terminal ISN31_06075 PF10150 Ribonuclease E/G family ISN31_06075 PF00575 S1 RNA binding domain ISN31_06080 PF00849 RNA pseudouridylate synthase ISN31_06080 PF01479 S4 domain ISN31_06090 PF02535 ZIP Zinc transporter ISN31_06100 PF01329 Pterin 4 alpha carbinolamine dehydratase ISN31_06105 PF01106 NifU-like domain ISN31_06115 PF00034 Cytochrome c ISN31_06120 PF00034 Cytochrome c ISN31_06125 PF00529 HlyD membrane-fusion protein of T1SS ISN31_06125 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISN31_06130 PF00873 AcrB/AcrD/AcrF family ISN31_06135 PF00873 AcrB/AcrD/AcrF family ISN31_06145 PF00795 Carbon-nitrogen hydrolase ISN31_06150 PF04371 Porphyromonas-type peptidyl-arginine deiminase ISN31_06160 PF00444 Ribosomal protein L36 ISN31_06165 PF02224 Cytidylate kinase ISN31_06170 PF00575 S1 RNA binding domain ISN31_06175 PF00216 Bacterial DNA-binding protein ISN31_06185 PF18073 Rubredoxin metal binding domain ISN31_06190 PF00953 Glycosyl transferase family 4 ISN31_06195 PF02719 Polysaccharide biosynthesis protein ISN31_06200 PF00483 Nucleotidyl transferase ISN31_06205 PF00108 Thiolase, N-terminal domain ISN31_06205 PF02803 Thiolase, C-terminal domain ISN31_06210 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ISN31_06210 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ISN31_06210 PF00378 Enoyl-CoA hydratase/isomerase ISN31_06220 PF00334 Nucleoside diphosphate kinase ISN31_06225 PF04055 Radical SAM superfamily ISN31_06235 PF13464 Domain of unknown function (DUF4115) ISN31_06245 PF01011 PQQ enzyme repeat ISN31_06245 PF13360 PQQ-like domain ISN31_06250 PF01926 50S ribosome-binding GTPase ISN31_06250 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ISN31_06255 PF12804 MobA-like NTP transferase domain ISN31_06260 PF03453 MoeA N-terminal region (domain I and II) ISN31_06260 PF00994 Probable molybdopterin binding domain ISN31_06260 PF03454 MoeA C-terminal region (domain IV) ISN31_06265 PF00899 ThiF family ISN31_06270 PF02254 TrkA-N domain ISN31_06270 PF00999 Sodium/hydrogen exchanger family ISN31_06285 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ISN31_06285 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ISN31_06290 PF00571 CBS domain ISN31_06290 PF00478 IMP dehydrogenase / GMP reductase domain ISN31_06295 PF00117 Glutamine amidotransferase class-I ISN31_06295 PF00958 GMP synthase C terminal domain ISN31_06295 PF02540 NAD synthase ISN31_06300 PF02798 Glutathione S-transferase, N-terminal domain ISN31_06300 PF00043 Glutathione S-transferase, C-terminal domain ISN31_06355 PF01055 Glycosyl hydrolases family 31 ISN31_06355 PF17137 Domain of unknown function (DUF5110) ISN31_06355 PF16338 Domain of unknown function (DUF4968) ISN31_06360 PF06745 KaiC ISN31_06365 PF08448 PAS fold ISN31_06365 PF13188 PAS domain ISN31_06365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN31_06365 PF00512 His Kinase A (phospho-acceptor) domain ISN31_06365 PF00072 Response regulator receiver domain ISN31_06370 PF01566 Natural resistance-associated macrophage protein ISN31_06375 PF02742 Iron dependent repressor, metal binding and dimerisation domain ISN31_06375 PF01325 Iron dependent repressor, N-terminal DNA binding domain ISN31_06380 PF14437 MafB19-like deaminase ISN31_06385 PF00929 Exonuclease ISN31_06390 PF00924 Mechanosensitive ion channel ISN31_06390 PF05552 Conserved TM helix ISN31_06395 PF00391 PEP-utilising enzyme, mobile domain ISN31_06395 PF02896 PEP-utilising enzyme, TIM barrel domain ISN31_06395 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ISN31_06400 PF03618 Kinase/pyrophosphorylase ISN31_06420 PF01066 CDP-alcohol phosphatidyltransferase ISN31_06430 PF00561 alpha/beta hydrolase fold ISN31_06460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN31_06460 PF13426 PAS domain ISN31_06460 PF00072 Response regulator receiver domain ISN31_06465 PF16921 Tex protein YqgF-like domain ISN31_06465 PF09371 Tex-like protein N-terminal domain ISN31_06465 PF00575 S1 RNA binding domain ISN31_06465 PF17674 HHH domain ISN31_06470 PF09308 LuxQ, periplasmic ISN31_06470 PF00512 His Kinase A (phospho-acceptor) domain ISN31_06470 PF00072 Response regulator receiver domain ISN31_06470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN31_06535 PF02638 Glycosyl hydrolase-like 10 ISN31_06545 PF01070 FMN-dependent dehydrogenase ISN31_06550 PF00155 Aminotransferase class I and II ISN31_06570 PF00501 AMP-binding enzyme ISN31_06570 PF13193 AMP-binding enzyme C-terminal domain ISN31_06570 PF00975 Thioesterase domain ISN31_06570 PF00668 Condensation domain ISN31_06570 PF00550 Phosphopantetheine attachment site ISN31_06575 PF00975 Thioesterase domain ISN31_06575 PF13193 AMP-binding enzyme C-terminal domain ISN31_06575 PF00501 AMP-binding enzyme ISN31_06575 PF00550 Phosphopantetheine attachment site ISN31_06575 PF00668 Condensation domain ISN31_06580 PF00501 AMP-binding enzyme ISN31_06580 PF13193 AMP-binding enzyme C-terminal domain ISN31_06580 PF00668 Condensation domain ISN31_06580 PF00550 Phosphopantetheine attachment site ISN31_06580 PF00975 Thioesterase domain ISN31_06585 PF13193 AMP-binding enzyme C-terminal domain ISN31_06585 PF00501 AMP-binding enzyme ISN31_06585 PF00668 Condensation domain ISN31_06585 PF00550 Phosphopantetheine attachment site ISN31_06585 PF00975 Thioesterase domain ISN31_06590 PF02797 Chalcone and stilbene synthases, C-terminal domain ISN31_06590 PF00195 Chalcone and stilbene synthases, N-terminal domain ISN31_06600 PF00378 Enoyl-CoA hydratase/isomerase ISN31_06605 PF00155 Aminotransferase class I and II ISN31_06610 PF00378 Enoyl-CoA hydratase/isomerase ISN31_06615 PF00005 ABC transporter ISN31_06615 PF00664 ABC transporter transmembrane region ISN31_06620 PF03621 MbtH-like protein ISN31_06630 PF18456 Diiron non-heme beta-hydroxylase N-terminal domain ISN31_06630 PF12706 Beta-lactamase superfamily domain ISN31_06775 PF02272 DHHA1 domain ISN31_06775 PF17768 RecJ OB domain ISN31_06775 PF01368 DHH family ISN31_06785 PF01272 Transcription elongation factor, GreA/GreB, C-term ISN31_06785 PF03449 Transcription elongation factor, N-terminal ISN31_06790 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ISN31_06790 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ISN31_06790 PF02142 MGS-like domain ISN31_06800 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ISN31_06800 PF00117 Glutamine amidotransferase class-I ISN31_06805 PF01113 Dihydrodipicolinate reductase, N-terminus ISN31_06805 PF05173 Dihydrodipicolinate reductase, C-terminus ISN31_06810 PF03473 MOSC domain ISN31_06810 PF03475 3-alpha domain ISN31_06815 PF00155 Aminotransferase class I and II ISN31_06825 PF05598 Transposase domain (DUF772) ISN31_06845 PF00550 Phosphopantetheine attachment site ISN31_06850 PF02801 Beta-ketoacyl synthase, C-terminal domain ISN31_06850 PF00109 Beta-ketoacyl synthase, N-terminal domain ISN31_06855 PF00202 Aminotransferase class-III ISN31_06905 PF00004 ATPase family associated with various cellular activities (AAA) ISN31_06935 PF00293 NUDIX domain ISN31_06945 PF07690 Major Facilitator Superfamily ISN31_06960 PF13614 AAA domain ISN31_06995 PF00436 Single-strand binding protein family ISN31_07000 PF01131 DNA topoisomerase ISN31_07000 PF01751 Toprim domain ISN31_07010 PF00145 C-5 cytosine-specific DNA methylase ISN31_07030 PF13276 HTH-like domain ISN31_07030 PF13333 Integrase core domain ISN31_07030 PF00665 Integrase core domain ISN31_07035 PF01527 Transposase ISN31_07290 PF03466 LysR substrate binding domain ISN31_07290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISN31_07295 PF13356 Arm DNA-binding domain ISN31_07295 PF00589 Phage integrase family ISN31_07305 PF01066 CDP-alcohol phosphatidyltransferase ISN31_07310 PF02151 UvrB/uvrC motif ISN31_07310 PF01541 GIY-YIG catalytic domain ISN31_07310 PF08459 UvrC Helix-hairpin-helix N-terminal ISN31_07320 PF01451 Low molecular weight phosphotyrosine protein phosphatase ISN31_07325 PF02348 Cytidylyltransferase ISN31_07330 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ISN31_07335 PF00664 ABC transporter transmembrane region ISN31_07335 PF00005 ABC transporter ISN31_07345 PF01618 MotA/TolQ/ExbB proton channel family ISN31_07350 PF00753 Metallo-beta-lactamase superfamily ISN31_07350 PF03772 Competence protein ISN31_07365 PF00005 ABC transporter ISN31_07370 PF02687 FtsX-like permease family ISN31_07370 PF12704 MacB-like periplasmic core domain ISN31_07380 PF03937 Flavinator of succinate dehydrogenase ISN31_07385 PF13237 4Fe-4S dicluster domain ISN31_07385 PF13085 2Fe-2S iron-sulfur cluster binding domain ISN31_07390 PF00890 FAD binding domain ISN31_07390 PF02910 Fumarate reductase flavoprotein C-term ISN31_07395 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ISN31_07400 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ISN31_07410 PF01571 Aminomethyltransferase folate-binding domain ISN31_07415 PF17912 MalK OB fold domain ISN31_07415 PF00005 ABC transporter ISN31_07420 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ISN31_07420 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ISN31_07425 PF02685 Glucokinase ISN31_07430 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ISN31_07435 PF00920 Dehydratase family ISN31_07440 PF01081 KDPG and KHG aldolase ISN31_07450 PF00528 Binding-protein-dependent transport system inner membrane component ISN31_07455 PF00528 Binding-protein-dependent transport system inner membrane component ISN31_07475 PF00356 Bacterial regulatory proteins, lacI family ISN31_07485 PF03795 YCII-related domain ISN31_07490 PF02616 Segregation and condensation protein ScpA ISN31_07495 PF04079 Segregation and condensation complex subunit ScpB ISN31_07500 PF01479 S4 domain ISN31_07500 PF00849 RNA pseudouridylate synthase ISN31_07520 PF00795 Carbon-nitrogen hydrolase ISN31_07525 PF00155 Aminotransferase class I and II ISN31_07530 PF00005 ABC transporter ISN31_07535 PF03379 CcmB protein ISN31_07540 PF01578 Cytochrome C assembly protein ISN31_07550 PF03100 CcmE ISN31_07555 PF01578 Cytochrome C assembly protein ISN31_07555 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal ISN31_07560 PF08534 Redoxin ISN31_07565 PF03918 Cytochrome C biogenesis protein ISN31_07575 PF00561 alpha/beta hydrolase fold ISN31_07580 PF00664 ABC transporter transmembrane region ISN31_07580 PF00005 ABC transporter ISN31_07585 PF00664 ABC transporter transmembrane region ISN31_07585 PF00005 ABC transporter ISN31_07595 PF02322 Cytochrome bd terminal oxidase subunit II ISN31_07615 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain ISN31_07615 PF02129 X-Pro dipeptidyl-peptidase (S15 family) ISN31_07635 PF02599 Global regulator protein family ISN31_07640 PF01411 tRNA synthetases class II (A) ISN31_07640 PF02272 DHHA1 domain ISN31_07640 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ISN31_07645 PF02631 RecX family ISN31_07650 PF00154 recA bacterial DNA recombination protein ISN31_07655 PF01726 LexA DNA binding domain ISN31_07655 PF00717 Peptidase S24-like ISN31_07660 PF03109 ABC1 family ISN31_07665 PF02464 Competence-damaged protein ISN31_07670 PF01926 50S ribosome-binding GTPase ISN31_07670 PF16360 GTP-binding GTPase Middle Region ISN31_07670 PF13167 GTP-binding GTPase N-terminal ISN31_07675 PF17209 Hfq protein ISN31_07685 PF00809 Pterin binding enzyme ISN31_07695 PF06480 FtsH Extracellular ISN31_07695 PF17862 AAA+ lid domain ISN31_07695 PF01434 Peptidase family M41 ISN31_07695 PF00004 ATPase family associated with various cellular activities (AAA) ISN31_07700 PF01728 FtsJ-like methyltransferase ISN31_07705 PF01985 CRS1 / YhbY (CRM) domain ISN31_07715 PF01551 Peptidase family M23 ISN31_07715 PF01476 LysM domain ISN31_07720 PF09335 SNARE associated Golgi protein ISN31_07730 PF01975 Survival protein SurE ISN31_07735 PF01713 Smr domain ISN31_07740 PF01142 tRNA pseudouridine synthase D (TruD) ISN31_07745 PF02542 YgbB family ISN31_07750 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ISN31_07755 PF04977 Septum formation initiator ISN31_07760 PF00113 Enolase, C-terminal TIM barrel domain ISN31_07760 PF03952 Enolase, N-terminal domain ISN31_07765 PF00793 DAHP synthetase I family ISN31_07770 PF06418 CTP synthase N-terminus ISN31_07770 PF00117 Glutamine amidotransferase class-I ISN31_07780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN31_07780 PF00986 DNA gyrase B subunit, carboxyl terminus ISN31_07780 PF00204 DNA gyrase B ISN31_07780 PF01751 Toprim domain ISN31_07790 PF01384 Phosphate transporter family ISN31_07800 PF00571 CBS domain ISN31_07800 PF03471 Transporter associated domain ISN31_07800 PF01595 Cyclin M transmembrane N-terminal domain ISN31_07815 PF00296 Luciferase-like monooxygenase ISN31_07825 PF17773 UPF0176 acylphosphatase like domain ISN31_07825 PF00581 Rhodanese-like domain ISN31_07835 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISN31_07845 PF00990 Diguanylate cyclase, GGDEF domain ISN31_07845 PF03707 Bacterial signalling protein N terminal repeat ISN31_07845 PF00563 EAL domain ISN31_07850 PF01645 Conserved region in glutamate synthase ISN31_07855 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ISN31_07855 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ISN31_07855 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ISN31_07865 PF00356 Bacterial regulatory proteins, lacI family ISN31_07870 PF00391 PEP-utilising enzyme, mobile domain ISN31_07870 PF05524 PEP-utilising enzyme, N-terminal ISN31_07870 PF00381 PTS HPr component phosphorylation site ISN31_07870 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ISN31_07870 PF02896 PEP-utilising enzyme, TIM barrel domain ISN31_07875 PF00294 pfkB family carbohydrate kinase ISN31_07880 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ISN31_07890 PF00072 Response regulator receiver domain ISN31_07890 PF00486 Transcriptional regulatory protein, C terminal ISN31_07895 PF00512 His Kinase A (phospho-acceptor) domain ISN31_07895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN31_07910 PF00005 ABC transporter ISN31_07910 PF02687 FtsX-like permease family ISN31_07910 PF12704 MacB-like periplasmic core domain ISN31_07955 PF03466 LysR substrate binding domain ISN31_07955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISN31_07960 PF02403 Seryl-tRNA synthetase N-terminal domain ISN31_07960 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ISN31_07965 PF03544 Gram-negative bacterial TonB protein C-terminal ISN31_07975 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ISN31_07980 PF00800 Prephenate dehydratase ISN31_07980 PF01817 Chorismate mutase type II ISN31_07980 PF01842 ACT domain ISN31_07985 PF00266 Aminotransferase class-V ISN31_07990 PF00174 Oxidoreductase molybdopterin binding domain ISN31_07995 PF01794 Ferric reductase like transmembrane component ISN31_08030 PF00106 short chain dehydrogenase ISN31_08045 PF07969 Amidohydrolase family ISN31_08050 PF00221 Aromatic amino acid lyase ISN31_08060 PF17391 Urocanase N-terminal domain ISN31_08060 PF01175 Urocanase Rossmann-like domain ISN31_08060 PF17392 Urocanase C-terminal domain ISN31_08090 PF03989 DNA gyrase C-terminal domain, beta-propeller ISN31_08090 PF00521 DNA gyrase/topoisomerase IV, subunit A ISN31_08095 PF01008 Initiation factor 2 subunit family ISN31_08105 PF00152 tRNA synthetases class II (D, K and N) ISN31_08110 PF01653 NAD-dependent DNA ligase adenylation domain ISN31_08110 PF03120 NAD-dependent DNA ligase OB-fold domain ISN31_08110 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ISN31_08110 PF00533 BRCA1 C Terminus (BRCT) domain ISN31_08110 PF12826 Helix-hairpin-helix motif ISN31_08115 PF00155 Aminotransferase class I and II ISN31_08120 PF04354 ZipA, C-terminal FtsZ-binding domain ISN31_08125 PF02463 RecF/RecN/SMC N terminal domain ISN31_08130 PF03948 Ribosomal protein L9, C-terminal domain ISN31_08130 PF01281 Ribosomal protein L9, N-terminal domain ISN31_08135 PF01084 Ribosomal protein S18 ISN31_08140 PF01250 Ribosomal protein S6 ISN31_08150 PF01521 Iron-sulphur cluster biosynthesis ISN31_08155 PF01336 OB-fold nucleic acid binding domain ISN31_08155 PF00152 tRNA synthetases class II (D, K and N) ISN31_08175 PF00196 Bacterial regulatory proteins, luxR family ISN31_08175 PF00072 Response regulator receiver domain ISN31_08220 PF00484 Carbonic anhydrase ISN31_08225 PF06052 3-hydroxyanthranilic acid dioxygenase ISN31_08235 PF00266 Aminotransferase class-V ISN31_08240 PF01494 FAD binding domain ISN31_08245 PF08411 Exonuclease C-terminal ISN31_08245 PF00929 Exonuclease ISN31_08270 PF01513 ATP-NAD kinase ISN31_08285 PF03377 TAL effector repeat ISN31_08295 PF03377 TAL effector repeat ISN31_08305 PF05088 Bacterial NAD-glutamate dehydrogenase ISN31_08315 PF00529 HlyD membrane-fusion protein of T1SS ISN31_08315 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISN31_08320 PF00873 AcrB/AcrD/AcrF family ISN31_08350 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ISN31_08350 PF02770 Acyl-CoA dehydrogenase, middle domain ISN31_08350 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ISN31_08355 PF01209 ubiE/COQ5 methyltransferase family ISN31_08360 PF02574 Homocysteine S-methyltransferase ISN31_08360 PF00809 Pterin binding enzyme ISN31_08365 PF00809 Pterin binding enzyme ISN31_08365 PF02310 B12 binding domain ISN31_08365 PF02574 Homocysteine S-methyltransferase ISN31_08365 PF02965 Vitamin B12 dependent methionine synthase, activation domain ISN31_08365 PF02607 B12 binding domain ISN31_08375 PF01757 Acyltransferase family ISN31_08385 PF04102 SlyX ISN31_08390 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ISN31_08390 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ISN31_08390 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ISN31_08395 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISN31_08395 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ISN31_08400 PF00255 Glutathione peroxidase ISN31_08410 PF00392 Bacterial regulatory proteins, gntR family ISN31_08415 PF00005 ABC transporter ISN31_08460 PF01612 3'-5' exonuclease ISN31_08460 PF00570 HRDC domain ISN31_08480 PF01584 CheW-like domain ISN31_08485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN31_08485 PF02203 Tar ligand binding domain homologue ISN31_08485 PF00672 HAMP domain ISN31_08490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN31_08490 PF00672 HAMP domain ISN31_08490 PF02743 Cache domain ISN31_08505 PF13188 PAS domain ISN31_08505 PF00990 Diguanylate cyclase, GGDEF domain ISN31_08505 PF03707 Bacterial signalling protein N terminal repeat ISN31_08505 PF00563 EAL domain ISN31_08515 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ISN31_08515 PF01138 3' exoribonuclease family, domain 1 ISN31_08515 PF03725 3' exoribonuclease family, domain 2 ISN31_08515 PF00575 S1 RNA binding domain ISN31_08515 PF00013 KH domain ISN31_08520 PF00312 Ribosomal protein S15 ISN31_08525 PF09157 Pseudouridine synthase II TruB, C-terminal ISN31_08525 PF01509 TruB family pseudouridylate synthase (N terminal domain) ISN31_08525 PF16198 tRNA pseudouridylate synthase B C-terminal domain ISN31_08530 PF02033 Ribosome-binding factor A ISN31_08535 PF08364 Bacterial translation initiation factor IF-2 associated region ISN31_08535 PF11987 Translation-initiation factor 2 ISN31_08535 PF00009 Elongation factor Tu GTP binding domain ISN31_08535 PF04760 Translation initiation factor IF-2, N-terminal region ISN31_08540 PF00575 S1 RNA binding domain ISN31_08540 PF08529 NusA N-terminal domain ISN31_08540 PF13184 NusA-like KH domain ISN31_08545 PF02576 RimP N-terminal domain ISN31_08545 PF17384 RimP C-terminal SH3 domain ISN31_08555 PF00361 Proton-conducting membrane transporter ISN31_08560 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus ISN31_08560 PF00361 Proton-conducting membrane transporter ISN31_08565 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ISN31_08565 PF00361 Proton-conducting membrane transporter ISN31_08570 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ISN31_08575 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ISN31_08580 PF12838 4Fe-4S dicluster domain ISN31_08585 PF00146 NADH dehydrogenase ISN31_08590 PF00384 Molybdopterin oxidoreductase ISN31_08590 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ISN31_08590 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal ISN31_08595 PF10531 SLBB domain ISN31_08595 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ISN31_08595 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ISN31_08605 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ISN31_08610 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ISN31_08615 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ISN31_08620 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ISN31_08635 PF00121 Triosephosphate isomerase ISN31_08645 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ISN31_08645 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ISN31_08645 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ISN31_08645 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ISN31_08650 PF01039 Carboxyl transferase domain ISN31_08650 PF17848 Acetyl-coA carboxylase zinc finger domain ISN31_08655 PF00290 Tryptophan synthase alpha chain ISN31_08665 PF00291 Pyridoxal-phosphate dependent enzyme ISN31_08670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISN31_08670 PF03466 LysR substrate binding domain ISN31_08680 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ISN31_08685 PF01416 tRNA pseudouridine synthase ISN31_08695 PF01118 Semialdehyde dehydrogenase, NAD binding domain ISN31_08695 PF02774 Semialdehyde dehydrogenase, dimerisation domain ISN31_08700 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISN31_08700 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISN31_08705 PF01264 Chorismate synthase ISN31_08710 PF05175 Methyltransferase small domain ISN31_08715 PF02630 SCO1/SenC ISN31_08720 PF02666 Phosphatidylserine decarboxylase ISN31_08725 PF06737 Transglycosylase-like domain ISN31_08730 PF05872 Bacterial protein of unknown function (DUF853) ISN31_08735 PF00293 NUDIX domain ISN31_08750 PF01272 Transcription elongation factor, GreA/GreB, C-term ISN31_08750 PF03449 Transcription elongation factor, N-terminal ISN31_08755 PF01738 Dienelactone hydrolase family ISN31_08775 PF00692 dUTPase ISN31_08780 PF10609 NUBPL iron-transfer P-loop NTPase ISN31_08790 PF00593 TonB dependent receptor ISN31_08790 PF07715 TonB-dependent Receptor Plug Domain ISN31_08800 PF00593 TonB dependent receptor ISN31_08800 PF07715 TonB-dependent Receptor Plug Domain ISN31_08805 PF13181 Tetratricopeptide repeat ISN31_08820 PF01431 Peptidase family M13 ISN31_08820 PF05649 Peptidase family M13 ISN31_08860 PF00892 EamA-like transporter family ISN31_08865 PF15457 Type III T3SS secreted effector HopW1-1/HopPmaA ISN31_08870 PF15457 Type III T3SS secreted effector HopW1-1/HopPmaA ISN31_08875 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISN31_08875 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISN31_08880 PF01266 FAD dependent oxidoreductase ISN31_08885 PF04235 Protein of unknown function (DUF418) ISN31_08890 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISN31_08895 PF00877 NlpC/P60 family ISN31_08900 PF00877 NlpC/P60 family ISN31_08915 PF03061 Thioesterase superfamily ISN31_08925 PF00375 Sodium:dicarboxylate symporter family ISN31_08930 PF00245 Alkaline phosphatase ISN31_08940 PF11734 TilS substrate C-terminal domain ISN31_08940 PF09179 TilS substrate binding domain ISN31_08940 PF01171 PP-loop family ISN31_08945 PF02609 Exonuclease VII small subunit ISN31_08950 PF00348 Polyprenyl synthetase ISN31_08955 PF00486 Transcriptional regulatory protein, C terminal ISN31_08955 PF00072 Response regulator receiver domain ISN31_08960 PF03150 Di-haem cytochrome c peroxidase ISN31_08960 PF00034 Cytochrome c ISN31_08965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN31_08965 PF00512 His Kinase A (phospho-acceptor) domain ISN31_08965 PF00072 Response regulator receiver domain ISN31_08965 PF08448 PAS fold ISN31_08965 PF13188 PAS domain ISN31_08970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISN31_08970 PF03466 LysR substrate binding domain ISN31_08975 PF06812 ImpA, N-terminal, type VI secretion system ISN31_08985 PF00069 Protein kinase domain ISN31_08985 PF03793 PASTA domain ISN31_09000 PF06761 Intracellular multiplication and human macrophage-killing ISN31_09000 PF14331 ImcF-related N-terminal domain ISN31_09000 PF06744 Type VI secretion protein IcmF C-terminal ISN31_09010 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE ISN31_09025 PF04717 Type VI secretion system, phage-baseplate injector ISN31_09025 PF06715 Gp5 C-terminal repeat (3 copies) ISN31_09035 PF17871 AAA lid domain ISN31_09035 PF07724 AAA domain (Cdc48 subfamily) ISN31_09035 PF10431 C-terminal, D2-small domain, of ClpB protein ISN31_09035 PF00004 ATPase family associated with various cellular activities (AAA) ISN31_09045 PF05947 Type VI secretion system, TssF ISN31_09050 PF04965 Gene 25-like lysozyme ISN31_09055 PF07024 ImpE protein ISN31_09060 PF05638 Type VI secretion system effector, Hcp ISN31_09065 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ISN31_09070 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 ISN31_09085 PF01523 Putative modulator of DNA gyrase ISN31_09090 PF04751 Protein of unknown function (DUF615) ISN31_09095 PF01523 Putative modulator of DNA gyrase ISN31_09105 PF10150 Ribonuclease E/G family ISN31_09105 PF00575 S1 RNA binding domain ISN31_09110 PF02545 Maf-like protein ISN31_09115 PF04402 Protein of unknown function (DUF541) ISN31_09125 PF00593 TonB dependent receptor ISN31_09125 PF07715 TonB-dependent Receptor Plug Domain ISN31_09130 PF02590 Predicted SPOUT methyltransferase ISN31_09145 PF01467 Cytidylyltransferase-like ISN31_09160 PF00133 tRNA synthetases class I (I, L, M and V) ISN31_09160 PF13603 Leucyl-tRNA synthetase, Domain 2 ISN31_09160 PF08264 Anticodon-binding domain of tRNA ISN31_09170 PF00085 Thioredoxin ISN31_09185 PF02592 Putative vitamin uptake transporter ISN31_09195 PF02574 Homocysteine S-methyltransferase ISN31_09200 PF00324 Amino acid permease ISN31_09210 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ISN31_09220 PF09334 tRNA synthetases class I (M) ISN31_09220 PF01588 Putative tRNA binding domain ISN31_09230 PF04060 Putative Fe-S cluster ISN31_09245 PF04542 Sigma-70 region 2 ISN31_09245 PF04545 Sigma-70, region 4 ISN31_09290 PF01042 Endoribonuclease L-PSP ISN31_09300 PF03706 Lysylphosphatidylglycerol synthase TM region ISN31_09300 PF09924 Uncharacterised conserved protein (DUF2156) ISN31_09330 PF07690 Major Facilitator Superfamily ISN31_09335 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ISN31_09340 PF03831 PhnA domain ISN31_09340 PF08274 PhnA Zinc-Ribbon ISN31_09345 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISN31_09355 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus ISN31_09355 PF05175 Methyltransferase small domain ISN31_09385 PF01258 Prokaryotic dksA/traR C4-type zinc finger ISN31_09395 PF01863 Protein of unknown function DUF45 ISN31_09410 PF13472 GDSL-like Lipase/Acylhydrolase family ISN31_09415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN31_09415 PF00672 HAMP domain ISN31_09415 PF00512 His Kinase A (phospho-acceptor) domain ISN31_09415 PF01627 Hpt domain ISN31_09415 PF00072 Response regulator receiver domain ISN31_09420 PF13360 PQQ-like domain ISN31_09420 PF01011 PQQ enzyme repeat ISN31_09425 PF00392 Bacterial regulatory proteins, gntR family ISN31_09425 PF07729 FCD domain ISN31_09430 PF02929 Beta galactosidase small chain ISN31_09430 PF02837 Glycosyl hydrolases family 2, sugar binding domain ISN31_09430 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ISN31_09430 PF00703 Glycosyl hydrolases family 2 ISN31_09430 PF16353 Domain of unknown function(DUF4981) ISN31_09445 PF04820 Tryptophan halogenase ISN31_09495 PF01642 Methylmalonyl-CoA mutase ISN31_09495 PF02310 B12 binding domain ISN31_09515 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ISN31_09515 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ISN31_09520 PF03797 Autotransporter beta-domain ISN31_09520 PF00082 Subtilase family ISN31_09520 PF12951 Passenger-associated-transport-repeat ISN31_09525 PF02803 Thiolase, C-terminal domain ISN31_09525 PF00108 Thiolase, N-terminal domain ISN31_09535 PF00012 Hsp70 protein ISN31_09550 PF00990 Diguanylate cyclase, GGDEF domain ISN31_09550 PF00072 Response regulator receiver domain ISN31_09565 PF04679 ATP dependent DNA ligase C terminal region ISN31_09565 PF04675 DNA ligase N terminus ISN31_09565 PF01068 ATP dependent DNA ligase domain ISN31_09570 PF04679 ATP dependent DNA ligase C terminal region ISN31_09570 PF04675 DNA ligase N terminus ISN31_09570 PF01068 ATP dependent DNA ligase domain ISN31_09575 PF00271 Helicase conserved C-terminal domain ISN31_09575 PF08494 DEAD/H associated ISN31_09575 PF00270 DEAD/DEAH box helicase ISN31_09585 PF01494 FAD binding domain ISN31_09590 PF00313 'Cold-shock' DNA-binding domain ISN31_09595 PF01048 Phosphorylase superfamily ISN31_09600 PF00156 Phosphoribosyl transferase domain ISN31_09605 PF00933 Glycosyl hydrolase family 3 N terminal domain ISN31_09615 PF01928 CYTH domain ISN31_09620 PF05958 tRNA (Uracil-5-)-methyltransferase ISN31_09625 PF00072 Response regulator receiver domain ISN31_09625 PF00486 Transcriptional regulatory protein, C terminal ISN31_09635 PF07650 KH domain ISN31_09635 PF01926 50S ribosome-binding GTPase ISN31_09640 PF00035 Double-stranded RNA binding motif ISN31_09640 PF14622 Ribonuclease-III-like ISN31_09650 PF10502 Signal peptidase, peptidase S26 ISN31_09655 PF00009 Elongation factor Tu GTP binding domain ISN31_09655 PF06421 GTP-binding protein LepA C-terminus ISN31_09655 PF03144 Elongation factor Tu domain 2 ISN31_09655 PF00679 Elongation factor G C-terminus ISN31_09660 PF13180 PDZ domain ISN31_09670 PF08281 Sigma-70, region 4 ISN31_09670 PF04542 Sigma-70 region 2 ISN31_09675 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ISN31_09675 PF00378 Enoyl-CoA hydratase/isomerase ISN31_09675 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ISN31_09690 PF01545 Cation efflux family ISN31_09695 PF03601 Conserved hypothetical protein 698 ISN31_09700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISN31_09710 PF00488 MutS domain V ISN31_09710 PF05192 MutS domain III ISN31_09710 PF01624 MutS domain I ISN31_09710 PF05190 MutS family domain IV ISN31_09710 PF05188 MutS domain II ISN31_09725 PF00141 Peroxidase ISN31_09730 PF01479 S4 domain ISN31_09740 PF01554 MatE ISN31_09745 PF01245 Ribosomal protein L19 ISN31_09750 PF01746 tRNA (Guanine-1)-methyltransferase ISN31_09755 PF05239 PRC-barrel domain ISN31_09755 PF01782 RimM N-terminal domain ISN31_09760 PF00886 Ribosomal protein S16 ISN31_09770 PF03060 Nitronate monooxygenase ISN31_09775 PF02881 SRP54-type protein, helical bundle domain ISN31_09775 PF02978 Signal peptide binding domain ISN31_09775 PF00448 SRP54-type protein, GTPase domain ISN31_09785 PF01263 Aldose 1-epimerase ISN31_09790 PF06964 Alpha-L-arabinofuranosidase C-terminal domain ISN31_09800 PF00999 Sodium/hydrogen exchanger family ISN31_09810 PF13417 Glutathione S-transferase, N-terminal domain ISN31_09810 PF00043 Glutathione S-transferase, C-terminal domain ISN31_09815 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation ISN31_09815 PF14508 Glycosyl-hydrolase 97 N-terminal ISN31_09815 PF10566 Glycoside hydrolase 97 ISN31_09825 PF02653 Branched-chain amino acid transport system / permease component ISN31_09830 PF02653 Branched-chain amino acid transport system / permease component ISN31_09835 PF00005 ABC transporter ISN31_09840 PF13407 Periplasmic binding protein domain ISN31_09845 PF00171 Aldehyde dehydrogenase family ISN31_09855 PF03466 LysR substrate binding domain ISN31_09855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISN31_09865 PF00920 Dehydratase family ISN31_09870 PF01464 Transglycosylase SLT domain ISN31_09890 PF03958 Bacterial type II/III secretion system short domain ISN31_09890 PF00263 Bacterial type II and III secretion system protein ISN31_09895 PF12833 Helix-turn-helix domain ISN31_09910 PF18269 T3SS EscN ATPase C-terminal domain ISN31_09910 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISN31_09910 PF02874 ATP synthase alpha/beta family, beta-barrel domain ISN31_09925 PF01514 Secretory protein of YscJ/FliF family ISN31_09940 PF01312 FlhB HrpN YscU SpaS Family ISN31_09945 PF00771 FHIPEP family ISN31_09960 PF00813 FliP family ISN31_09965 PF01313 Bacterial export proteins, family 3 ISN31_09995 PF00072 Response regulator receiver domain ISN31_09995 PF00486 Transcriptional regulatory protein, C terminal ISN31_10020 PF04542 Sigma-70 region 2 ISN31_10020 PF08281 Sigma-70, region 4 ISN31_10040 PF18073 Rubredoxin metal binding domain ISN31_10045 PF00155 Aminotransferase class I and II ISN31_10055 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ISN31_10060 PF00510 Cytochrome c oxidase subunit III ISN31_10065 PF00115 Cytochrome C and Quinol oxidase polypeptide I ISN31_10070 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ISN31_10070 PF06481 COX Aromatic Rich Motif ISN31_10080 PF00589 Phage integrase family ISN31_10115 PF13087 AAA domain ISN31_10115 PF13091 PLD-like domain ISN31_10120 PF03389 MobA/MobL family ISN31_10205 PF02401 LytB protein ISN31_10210 PF01252 Signal peptidase (SPase) II ISN31_10215 PF06827 Zinc finger found in FPG and IleRS ISN31_10215 PF08264 Anticodon-binding domain of tRNA ISN31_10215 PF00133 tRNA synthetases class I (I, L, M and V) ISN31_10220 PF06574 FAD synthetase ISN31_10220 PF01687 Riboflavin kinase ISN31_10235 PF03023 Lipid II flippase MurJ ISN31_10240 PF01649 Ribosomal protein S20 ISN31_10245 PF01018 GTP1/OBG ISN31_10245 PF01926 50S ribosome-binding GTPase ISN31_10250 PF01016 Ribosomal L27 protein ISN31_10255 PF00829 Ribosomal prokaryotic L21 protein ISN31_10260 PF17755 UvrA DNA-binding domain ISN31_10260 PF17760 UvrA interaction domain ISN31_10260 PF00005 ABC transporter ISN31_10275 PF00378 Enoyl-CoA hydratase/isomerase ISN31_10295 PF04376 Arginine-tRNA-protein transferase, N terminus ISN31_10295 PF04377 Arginine-tRNA-protein transferase, C terminus ISN31_10305 PF01370 NAD dependent epimerase/dehydratase family ISN31_10305 PF02222 ATP-grasp domain ISN31_10360 PF13291 ACT domain ISN31_10360 PF04607 Region found in RelA / SpoT proteins ISN31_10360 PF02824 TGS domain ISN31_10375 PF12706 Beta-lactamase superfamily domain ISN31_10380 PF03070 TENA/THI-4/PQQC family ISN31_10385 PF05402 Coenzyme PQQ synthesis protein D (PqqD) ISN31_10390 PF04055 Radical SAM superfamily ISN31_10390 PF13186 Iron-sulfur cluster-binding domain ISN31_10400 PF00654 Voltage gated chloride channel ISN31_10405 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ISN31_10405 PF00271 Helicase conserved C-terminal domain ISN31_10405 PF11898 Domain of unknown function (DUF3418) ISN31_10405 PF04408 Helicase associated domain (HA2) ISN31_10405 PF00270 DEAD/DEAH box helicase ISN31_10410 PF00210 Ferritin-like domain ISN31_10415 PF09382 RQC domain ISN31_10415 PF00570 HRDC domain ISN31_10415 PF00271 Helicase conserved C-terminal domain ISN31_10415 PF16124 RecQ zinc-binding ISN31_10415 PF00270 DEAD/DEAH box helicase ISN31_10435 PF06508 Queuosine biosynthesis protein QueC ISN31_10440 PF04055 Radical SAM superfamily ISN31_10450 PF00691 OmpA family ISN31_10455 PF04052 TolB amino-terminal domain ISN31_10455 PF07676 WD40-like Beta Propeller Repeat ISN31_10465 PF02472 Biopolymer transport protein ExbD/TolR ISN31_10470 PF01618 MotA/TolQ/ExbB proton channel family ISN31_10475 PF03061 Thioesterase superfamily ISN31_10480 PF17864 RuvB AAA lid domain ISN31_10480 PF05491 RuvB C-terminal winged helix domain ISN31_10480 PF05496 Holliday junction DNA helicase RuvB P-loop domain ISN31_10485 PF02705 K+ potassium transporter ISN31_10490 PF07499 RuvA, C-terminal domain ISN31_10490 PF01330 RuvA N terminal domain ISN31_10495 PF02075 Crossover junction endodeoxyribonuclease RuvC ISN31_10500 PF01709 Transcriptional regulator ISN31_10520 PF01336 OB-fold nucleic acid binding domain ISN31_10520 PF00152 tRNA synthetases class II (D, K and N) ISN31_10520 PF02938 GAD domain ISN31_10540 PF03932 CutC family ISN31_10545 PF01112 Asparaginase ISN31_10585 PF01339 CheB methylesterase ISN31_10585 PF00072 Response regulator receiver domain ISN31_10590 PF02895 Signal transducing histidine kinase, homodimeric domain ISN31_10590 PF01627 Hpt domain ISN31_10590 PF01584 CheW-like domain ISN31_10590 PF00072 Response regulator receiver domain ISN31_10590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN31_10595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN31_10595 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term ISN31_10600 PF01584 CheW-like domain ISN31_10605 PF00072 Response regulator receiver domain ISN31_10610 PF00072 Response regulator receiver domain ISN31_10615 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ISN31_10615 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ISN31_10625 PF00593 TonB dependent receptor ISN31_10630 PF00814 Glycoprotease family ISN31_10635 PF13307 Helicase C-terminal domain ISN31_10635 PF04851 Type III restriction enzyme, res subunit ISN31_10645 PF14814 Bifunctional transglycosylase second domain ISN31_10645 PF00905 Penicillin binding protein transpeptidase domain ISN31_10645 PF00912 Transglycosylase ISN31_10650 PF00535 Glycosyl transferase family 2 ISN31_10670 PF00072 Response regulator receiver domain ISN31_10670 PF00196 Bacterial regulatory proteins, luxR family ISN31_10675 PF07730 Histidine kinase ISN31_10685 PF03775 Septum formation inhibitor MinC, C-terminal domain ISN31_10685 PF05209 Septum formation inhibitor MinC, N-terminal domain ISN31_10690 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ISN31_10695 PF03776 Septum formation topological specificity factor MinE ISN31_10705 PF02702 Osmosensitive K+ channel His kinase sensor domain ISN31_10705 PF00512 His Kinase A (phospho-acceptor) domain ISN31_10705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN31_10705 PF13493 Domain of unknown function (DUF4118) ISN31_10710 PF00486 Transcriptional regulatory protein, C terminal ISN31_10710 PF00072 Response regulator receiver domain ISN31_10720 PF08019 Phosphoethanolamine transferase EptA/EptB ISN31_10720 PF00884 Sulfatase ISN31_10835 PF07690 Major Facilitator Superfamily ISN31_10840 PF00005 ABC transporter ISN31_10840 PF03412 Peptidase C39 family ISN31_10840 PF00664 ABC transporter transmembrane region ISN31_10860 PF02347 Glycine cleavage system P-protein ISN31_10875 PF18011 C-terminal domain found in long catalases ISN31_10875 PF00199 Catalase ISN31_10875 PF06628 Catalase-related immune-responsive ISN31_10890 PF02585 GlcNAc-PI de-N-acetylase ISN31_10900 PF08240 Alcohol dehydrogenase GroES-like domain ISN31_10900 PF13823 Alcohol dehydrogenase GroES-associated ISN31_10900 PF00107 Zinc-binding dehydrogenase ISN31_10910 PF10091 Putative glucoamylase ISN31_10910 PF06165 Glycosyltransferase family 36 ISN31_10910 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain ISN31_10920 PF17755 UvrA DNA-binding domain ISN31_10955 PF02384 N-6 DNA Methylase ISN31_10955 PF12161 HsdM N-terminal domain ISN31_10975 PF01420 Type I restriction modification DNA specificity domain ISN31_10980 PF18766 SWI2/SNF2 ATPase ISN31_10980 PF12008 Type I restriction and modification enzyme - subunit R C terminal ISN31_10980 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) ISN31_11005 PF01433 Peptidase family M1 domain ISN31_11020 PF00709 Adenylosuccinate synthetase ISN31_11030 PF01145 SPFH domain / Band 7 family ISN31_11035 PF12221 Bacterial membrane protein N terminal ISN31_11035 PF01145 SPFH domain / Band 7 family ISN31_11040 PF00107 Zinc-binding dehydrogenase ISN31_11040 PF08240 Alcohol dehydrogenase GroES-like domain ISN31_11045 PF00072 Response regulator receiver domain ISN31_11050 PF01556 DnaJ C terminal domain ISN31_11050 PF00226 DnaJ domain ISN31_11060 PF08534 Redoxin ISN31_11070 PF06832 Penicillin-Binding Protein C-terminus Family ISN31_11070 PF00912 Transglycosylase ISN31_11070 PF00905 Penicillin binding protein transpeptidase domain ISN31_11090 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain ISN31_11090 PF01835 MG2 domain ISN31_11090 PF17962 Bacterial macroglobulin domain 6 ISN31_11090 PF11974 Bacterial alpha-2-macroglobulin MG3 domain ISN31_11090 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain ISN31_11090 PF00207 Alpha-2-macroglobulin family ISN31_11090 PF07703 Alpha-2-macroglobulin bait region domain ISN31_11090 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain ISN31_11105 PF07715 TonB-dependent Receptor Plug Domain ISN31_11105 PF00593 TonB dependent receptor ISN31_11115 PF03377 TAL effector repeat ISN31_11130 PF04303 PrpF protein ISN31_11145 PF00694 Aconitase C-terminal domain ISN31_11145 PF00330 Aconitase family (aconitate hydratase) ISN31_11150 PF00285 Citrate synthase, C-terminal domain ISN31_11160 PF00285 Citrate synthase, C-terminal domain ISN31_11185 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system ISN31_11190 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system ISN31_11205 PF09115 DNA polymerase III, delta subunit, C terminal ISN31_11210 PF02223 Thymidylate kinase ISN31_11215 PF02618 YceG-like family ISN31_11220 PF04715 Anthranilate synthase component I, N terminal region ISN31_11220 PF00425 chorismate binding enzyme ISN31_11225 PF02801 Beta-ketoacyl synthase, C-terminal domain ISN31_11225 PF00109 Beta-ketoacyl synthase, N-terminal domain ISN31_11230 PF00550 Phosphopantetheine attachment site ISN31_11240 PF00698 Acyl transferase domain ISN31_11245 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ISN31_11245 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ISN31_11250 PF01783 Ribosomal L32p protein family ISN31_11255 PF02620 Large ribosomal RNA subunit accumulation protein YceD ISN31_11260 PF02545 Maf-like protein ISN31_11280 PF17863 AAA lid domain ISN31_11280 PF07726 ATPase family associated with various cellular activities (AAA) ISN31_11290 PF01841 Transglutaminase-like superfamily ISN31_11290 PF13559 Domain of unknown function (DUF4129) ISN31_11290 PF11992 Domain of unknown function (DUF3488) ISN31_11300 PF01230 HIT domain ISN31_11305 PF02132 RecR protein ISN31_11305 PF13662 Toprim domain ISN31_11310 PF02575 YbaB/EbfC DNA-binding family ISN31_11315 PF12170 DNA polymerase III tau subunit V interacting with alpha ISN31_11315 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding ISN31_11315 PF12169 DNA polymerase III subunits gamma and tau domain III ISN31_11330 PF02391 MoaE protein ISN31_11335 PF02597 ThiS family ISN31_11340 PF01967 MoaC family ISN31_11350 PF04055 Radical SAM superfamily ISN31_11350 PF06463 Molybdenum Cofactor Synthesis C ISN31_11355 PF12706 Beta-lactamase superfamily domain ISN31_11365 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ISN31_11390 PF00929 Exonuclease ISN31_11395 PF00075 RNase H ISN31_11405 PF00753 Metallo-beta-lactamase superfamily ISN31_11405 PF16123 Hydroxyacylglutathione hydrolase C-terminus ISN31_11410 PF05257 CHAP domain ISN31_11410 PF01476 LysM domain ISN31_11435 PF00216 Bacterial DNA-binding protein ISN31_11440 PF05362 Lon protease (S16) C-terminal proteolytic domain ISN31_11440 PF02190 ATP-dependent protease La (LON) substrate-binding domain ISN31_11440 PF00004 ATPase family associated with various cellular activities (AAA) ISN31_11445 PF06689 ClpX C4-type zinc finger ISN31_11445 PF10431 C-terminal, D2-small domain, of ClpB protein ISN31_11445 PF07724 AAA domain (Cdc48 subfamily) ISN31_11450 PF00574 Clp protease ISN31_11455 PF05698 Bacterial trigger factor protein (TF) C-terminus ISN31_11455 PF05697 Bacterial trigger factor protein (TF) ISN31_11500 PF00180 Isocitrate/isopropylmalate dehydrogenase ISN31_11500 PF18324 Hypothetical protein TT1725 ISN31_11510 PF00462 Glutaredoxin ISN31_11515 PF01435 Peptidase family M48 ISN31_11515 PF13181 Tetratricopeptide repeat ISN31_11520 PF00072 Response regulator receiver domain ISN31_11520 PF00486 Transcriptional regulatory protein, C terminal ISN31_11525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN31_11525 PF00512 His Kinase A (phospho-acceptor) domain ISN31_11525 PF00989 PAS fold ISN31_11525 PF11808 Phosphate regulon sensor protein PhoR ISN31_11530 PF02503 Polyphosphate kinase middle domain ISN31_11530 PF13090 Polyphosphate kinase C-terminal domain 2 ISN31_11530 PF17941 Polyphosphate kinase C-terminal domain 1 ISN31_11530 PF13089 Polyphosphate kinase N-terminal domain ISN31_11535 PF02541 Ppx/GppA phosphatase family ISN31_11540 PF00534 Glycosyl transferases group 1 ISN31_11540 PF13439 Glycosyltransferase Family 4 ISN31_11545 PF01569 PAP2 superfamily ISN31_11550 PF00149 Calcineurin-like phosphoesterase ISN31_11565 PF04305 Protein of unknown function (DUF455) ISN31_11570 PF00156 Phosphoribosyl transferase domain ISN31_11585 PF02875 Mur ligase family, glutamate ligase domain ISN31_11585 PF08245 Mur ligase middle domain ISN31_11590 PF00300 Histidine phosphatase superfamily (branch 1) ISN31_11595 PF10459 Peptidase S46 ISN31_11600 PF08240 Alcohol dehydrogenase GroES-like domain ISN31_11600 PF00107 Zinc-binding dehydrogenase ISN31_11610 PF00005 ABC transporter ISN31_11610 PF17850 CysA C-terminal regulatory domain ISN31_11610 PF12857 TOBE-like domain ISN31_11615 PF00528 Binding-protein-dependent transport system inner membrane component ISN31_11620 PF00528 Binding-protein-dependent transport system inner membrane component ISN31_11630 PF00155 Aminotransferase class I and II ISN31_11635 PF00849 RNA pseudouridylate synthase ISN31_11650 PF00223 Photosystem I psaA/psaB protein ISN31_11650 PF00691 OmpA family ISN31_11670 PF00248 Aldo/keto reductase family ISN31_11675 PF00107 Zinc-binding dehydrogenase ISN31_11675 PF08240 Alcohol dehydrogenase GroES-like domain ISN31_11685 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ISN31_11685 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISN31_11710 PF03009 Glycerophosphoryl diester phosphodiesterase family ISN31_11730 PF00043 Glutathione S-transferase, C-terminal domain ISN31_11730 PF02798 Glutathione S-transferase, N-terminal domain ISN31_11745 PF00056 lactate/malate dehydrogenase, NAD binding domain ISN31_11745 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ISN31_11755 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ISN31_11760 PF00679 Elongation factor G C-terminus ISN31_11760 PF03144 Elongation factor Tu domain 2 ISN31_11760 PF00009 Elongation factor Tu GTP binding domain ISN31_11775 PF01474 Class-II DAHP synthetase family ISN31_11785 PF02600 Disulfide bond formation protein DsbB ISN31_11790 PF01196 Ribosomal protein L17 ISN31_11795 PF01000 RNA polymerase Rpb3/RpoA insert domain ISN31_11795 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ISN31_11795 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ISN31_11800 PF00163 Ribosomal protein S4/S9 N-terminal domain ISN31_11800 PF01479 S4 domain ISN31_11805 PF00411 Ribosomal protein S11 ISN31_11810 PF00416 Ribosomal protein S13/S18 ISN31_11815 PF00344 SecY translocase ISN31_11820 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ISN31_11825 PF00327 Ribosomal protein L30p/L7e ISN31_11830 PF00333 Ribosomal protein S5, N-terminal domain ISN31_11830 PF03719 Ribosomal protein S5, C-terminal domain ISN31_11835 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ISN31_11840 PF00347 Ribosomal protein L6 ISN31_11845 PF00410 Ribosomal protein S8 ISN31_11850 PF00253 Ribosomal protein S14p/S29e ISN31_11855 PF00281 Ribosomal protein L5 ISN31_11855 PF00673 ribosomal L5P family C-terminus ISN31_11860 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ISN31_11860 PF00467 KOW motif ISN31_11865 PF00238 Ribosomal protein L14p/L23e ISN31_11870 PF00366 Ribosomal protein S17 ISN31_11875 PF00831 Ribosomal L29 protein ISN31_11880 PF00252 Ribosomal protein L16p/L10e ISN31_11885 PF00189 Ribosomal protein S3, C-terminal domain ISN31_11885 PF07650 KH domain ISN31_11890 PF00237 Ribosomal protein L22p/L17e ISN31_11895 PF00203 Ribosomal protein S19 ISN31_11900 PF03947 Ribosomal Proteins L2, C-terminal domain ISN31_11900 PF00181 Ribosomal Proteins L2, RNA binding domain ISN31_11905 PF00276 Ribosomal protein L23 ISN31_11910 PF00573 Ribosomal protein L4/L1 family ISN31_11915 PF00297 Ribosomal protein L3 ISN31_11920 PF00338 Ribosomal protein S10p/S20e ISN31_11925 PF03143 Elongation factor Tu C-terminal domain ISN31_11925 PF03144 Elongation factor Tu domain 2 ISN31_11925 PF00009 Elongation factor Tu GTP binding domain ISN31_11930 PF03764 Elongation factor G, domain IV ISN31_11930 PF14492 Elongation Factor G, domain II ISN31_11930 PF00679 Elongation factor G C-terminus ISN31_11930 PF00009 Elongation factor Tu GTP binding domain ISN31_11930 PF03144 Elongation factor Tu domain 2 ISN31_11935 PF00177 Ribosomal protein S7p/S5e ISN31_11940 PF00164 Ribosomal protein S12/S23 ISN31_11945 PF00623 RNA polymerase Rpb1, domain 2 ISN31_11945 PF04997 RNA polymerase Rpb1, domain 1 ISN31_11945 PF04998 RNA polymerase Rpb1, domain 5 ISN31_11945 PF04983 RNA polymerase Rpb1, domain 3 ISN31_11945 PF05000 RNA polymerase Rpb1, domain 4 ISN31_11950 PF04560 RNA polymerase Rpb2, domain 7 ISN31_11950 PF00562 RNA polymerase Rpb2, domain 6 ISN31_11950 PF10385 RNA polymerase beta subunit external 1 domain ISN31_11950 PF04565 RNA polymerase Rpb2, domain 3 ISN31_11950 PF04563 RNA polymerase beta subunit ISN31_11950 PF04561 RNA polymerase Rpb2, domain 2 ISN31_11955 PF16320 Ribosomal protein L7/L12 dimerisation domain ISN31_11955 PF00542 Ribosomal protein L7/L12 C-terminal domain ISN31_11960 PF00466 Ribosomal protein L10 ISN31_11965 PF00687 Ribosomal protein L1p/L10e family ISN31_11970 PF00298 Ribosomal protein L11, RNA binding domain ISN31_11970 PF03946 Ribosomal protein L11, N-terminal domain ISN31_11975 PF02357 Transcription termination factor nusG ISN31_11975 PF00467 KOW motif ISN31_11980 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ISN31_11990 PF00009 Elongation factor Tu GTP binding domain ISN31_11990 PF03144 Elongation factor Tu domain 2 ISN31_11990 PF03143 Elongation factor Tu C-terminal domain ISN31_12010 PF01926 50S ribosome-binding GTPase ISN31_12010 PF06071 Protein of unknown function (DUF933) ISN31_12015 PF01195 Peptidyl-tRNA hydrolase ISN31_12020 PF14693 Ribosomal protein TL5, C-terminal domain ISN31_12020 PF01386 Ribosomal L25p family ISN31_12025 PF14572 Phosphoribosyl synthetase-associated domain ISN31_12025 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ISN31_12035 PF00288 GHMP kinases N terminal domain ISN31_12035 PF08544 GHMP kinases C terminal ISN31_12040 PF03550 Outer membrane lipoprotein LolB ISN31_12050 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ISN31_12050 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ISN31_12050 PF01488 Shikimate / quinate 5-dehydrogenase ISN31_12055 PF00472 RF-1 domain ISN31_12055 PF03462 PCRF domain ISN31_12075 PF04185 Phosphoesterase family ISN31_12075 PF05506 Domain of unknown function (DUF756) ISN31_12090 PF03466 LysR substrate binding domain ISN31_12090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISN31_12095 PF12848 ABC transporter ISN31_12095 PF00005 ABC transporter ISN31_12100 PF07715 TonB-dependent Receptor Plug Domain ISN31_12100 PF00593 TonB dependent receptor ISN31_12105 PF07715 TonB-dependent Receptor Plug Domain ISN31_12105 PF00593 TonB dependent receptor ISN31_12120 PF05598 Transposase domain (DUF772) ISN31_12165 PF05175 Methyltransferase small domain ISN31_12165 PF17827 PrmC N-terminal domain ISN31_12170 PF10417 C-terminal domain of 1-Cys peroxiredoxin ISN31_12170 PF00578 AhpC/TSA family ISN31_12175 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISN31_12175 PF13192 Thioredoxin domain ISN31_12180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISN31_12180 PF03466 LysR substrate binding domain ISN31_12195 PF00923 Transaldolase/Fructose-6-phosphate aldolase ISN31_12200 PF01625 Peptide methionine sulfoxide reductase ISN31_12225 PF00749 tRNA synthetases class I (E and Q), catalytic domain ISN31_12225 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ISN31_12230 PF00892 EamA-like transporter family ISN31_12250 PF18125 RlmM ferredoxin-like domain ISN31_12250 PF01728 FtsJ-like methyltransferase ISN31_12255 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ISN31_12255 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ISN31_12275 PF01494 FAD binding domain ISN31_12280 PF01494 FAD binding domain ISN31_12290 PF01923 Cobalamin adenosyltransferase ISN31_12295 PF00850 Histone deacetylase domain ISN31_12305 PF03968 OstA-like protein ISN31_12305 PF04453 LPS transport system D ISN31_12310 PF00639 PPIC-type PPIASE domain ISN31_12310 PF09312 SurA N-terminal domain ISN31_12315 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ISN31_12320 PF00398 Ribosomal RNA adenine dimethylase ISN31_12325 PF04379 ApaG domain ISN31_12330 PF00149 Calcineurin-like phosphoesterase ISN31_12335 PF00186 Dihydrofolate reductase ISN31_12340 PF00303 Thymidylate synthase ISN31_12345 PF01790 Prolipoprotein diacylglyceryl transferase ISN31_12360 PF04011 LemA family ISN31_12365 PF03741 Integral membrane protein TerC family ISN31_12370 PF01219 Prokaryotic diacylglycerol kinase ISN31_12380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN31_12380 PF00512 His Kinase A (phospho-acceptor) domain ISN31_12380 PF08521 Two-component sensor kinase N-terminal ISN31_12385 PF00072 Response regulator receiver domain ISN31_12385 PF00486 Transcriptional regulatory protein, C terminal ISN31_12390 PF13472 GDSL-like Lipase/Acylhydrolase family ISN31_12395 PF00005 ABC transporter ISN31_12420 PF00593 TonB dependent receptor ISN31_12420 PF07715 TonB-dependent Receptor Plug Domain ISN31_12430 PF00248 Aldo/keto reductase family ISN31_12435 PF07662 Na+ dependent nucleoside transporter C-terminus ISN31_12435 PF01773 Na+ dependent nucleoside transporter N-terminus ISN31_12435 PF07670 Nucleoside recognition ISN31_12440 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ISN31_12440 PF00294 pfkB family carbohydrate kinase ISN31_12455 PF01207 Dihydrouridine synthase (Dus) ISN31_12480 PF02773 S-adenosylmethionine synthetase, C-terminal domain ISN31_12480 PF02772 S-adenosylmethionine synthetase, central domain ISN31_12480 PF00438 S-adenosylmethionine synthetase, N-terminal domain ISN31_12485 PF00328 Histidine phosphatase superfamily (branch 2) ISN31_12510 PF00311 Phosphoenolpyruvate carboxylase ISN31_12515 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ISN31_12515 PF05221 S-adenosyl-L-homocysteine hydrolase ISN31_12520 PF13649 Methyltransferase domain ISN31_12545 PF02219 Methylenetetrahydrofolate reductase ISN31_12555 PF00293 NUDIX domain ISN31_12565 PF07516 SecA Wing and Scaffold domain ISN31_12565 PF02810 SEC-C motif ISN31_12565 PF07517 SecA DEAD-like domain ISN31_12565 PF01043 SecA preprotein cross-linking domain ISN31_12570 PF01476 LysM domain ISN31_12570 PF08525 Opacity-associated protein A N-terminal motif ISN31_12570 PF01551 Peptidase family M23 ISN31_12580 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ISN31_12585 PF00091 Tubulin/FtsZ family, GTPase domain ISN31_12585 PF12327 FtsZ family, C-terminal domain ISN31_12590 PF02491 SHS2 domain inserted in FTSA ISN31_12595 PF03799 Cell division protein FtsQ ISN31_12595 PF08478 POTRA domain, FtsQ-type ISN31_12600 PF01820 D-ala D-ala ligase N-terminus ISN31_12600 PF07478 D-ala D-ala ligase C-terminus ISN31_12605 PF08245 Mur ligase middle domain ISN31_12605 PF02875 Mur ligase family, glutamate ligase domain ISN31_12605 PF01225 Mur ligase family, catalytic domain ISN31_12610 PF04101 Glycosyltransferase family 28 C-terminal domain ISN31_12610 PF03033 Glycosyltransferase family 28 N-terminal domain ISN31_12615 PF01098 Cell cycle protein ISN31_12620 PF00953 Glycosyl transferase family 4 ISN31_12625 PF08245 Mur ligase middle domain ISN31_12625 PF01225 Mur ligase family, catalytic domain ISN31_12625 PF02875 Mur ligase family, glutamate ligase domain ISN31_12630 PF08245 Mur ligase middle domain ISN31_12630 PF02875 Mur ligase family, glutamate ligase domain ISN31_12630 PF01225 Mur ligase family, catalytic domain ISN31_12635 PF00905 Penicillin binding protein transpeptidase domain ISN31_12635 PF03717 Penicillin-binding Protein dimerisation domain ISN31_12640 PF04999 Cell division protein FtsL ISN31_12645 PF01795 MraW methylase family ISN31_12650 PF02381 MraZ protein, putative antitoxin-like ISN31_12675 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ISN31_12685 PF02021 Uncharacterised protein family UPF0102 ISN31_12695 PF01565 FAD binding domain ISN31_12695 PF02913 FAD linked oxidases, C-terminal domain ISN31_12700 PF00072 Response regulator receiver domain ISN31_12700 PF00486 Transcriptional regulatory protein, C terminal ISN31_12705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN31_12705 PF13493 Domain of unknown function (DUF4118) ISN31_12705 PF02702 Osmosensitive K+ channel His kinase sensor domain ISN31_12705 PF00512 His Kinase A (phospho-acceptor) domain ISN31_12705 PF13492 GAF domain ISN31_12710 PF02669 K+-transporting ATPase, c chain ISN31_12720 PF03814 Potassium-transporting ATPase A subunit ISN31_12740 PF00586 AIR synthase related protein, N-terminal domain ISN31_12740 PF02769 AIR synthase related protein, C-terminal domain ISN31_12745 PF01029 NusB family ISN31_12750 PF00885 6,7-dimethyl-8-ribityllumazine synthase ISN31_12755 PF00925 GTP cyclohydrolase II ISN31_12755 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ISN31_12760 PF00677 Lumazine binding domain ISN31_12765 PF01872 RibD C-terminal domain ISN31_12765 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ISN31_12775 PF03477 ATP cone domain ISN31_12780 PF00464 Serine hydroxymethyltransferase ISN31_12795 PF00005 ABC transporter ISN31_12795 PF12848 ABC transporter ISN31_12800 PF01327 Polypeptide deformylase ISN31_12815 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ISN31_12815 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ISN31_12815 PF02770 Acyl-CoA dehydrogenase, middle domain ISN31_12825 PF00501 AMP-binding enzyme ISN31_12825 PF13193 AMP-binding enzyme C-terminal domain ISN31_12830 PF00550 Phosphopantetheine attachment site ISN31_12835 PF03062 MBOAT, membrane-bound O-acyltransferase family ISN31_12840 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX ISN31_12855 PF13632 Glycosyl transferase family group 2 ISN31_12855 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ISN31_12865 PF02350 UDP-N-acetylglucosamine 2-epimerase ISN31_12870 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ISN31_12870 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ISN31_12910 PF07715 TonB-dependent Receptor Plug Domain ISN31_12910 PF00593 TonB dependent receptor ISN31_12920 PF00392 Bacterial regulatory proteins, gntR family ISN31_12920 PF07702 UTRA domain ISN31_12930 PF00263 Bacterial type II and III secretion system protein ISN31_12930 PF03958 Bacterial type II/III secretion system short domain ISN31_12940 PF10741 Type II secretion system (T2SS), protein M subtype b ISN31_12945 PF05137 Fimbrial assembly protein (PilN) ISN31_12950 PF03934 Type II secretion system (T2SS), protein K ISN31_12960 PF07963 Prokaryotic N-terminal methylation motif ISN31_12965 PF12019 Type II transport protein GspH ISN31_12970 PF08334 Type II secretion system (T2SS), protein G ISN31_12975 PF00482 Type II secretion system (T2SS), protein F ISN31_12980 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ISN31_12980 PF00437 Type II/IV secretion system protein ISN31_12985 PF04151 Bacterial pre-peptidase C-terminal domain ISN31_12985 PF00082 Subtilase family ISN31_12990 PF05658 Head domain of trimeric autotransporter adhesin ISN31_12990 PF03895 YadA-like membrane anchor domain ISN31_12990 PF13018 Extended Signal Peptide of Type V secretion system ISN31_12990 PF05662 Coiled stalk of trimeric autotransporter adhesin ISN31_13000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN31_13000 PF00672 HAMP domain ISN31_13000 PF02203 Tar ligand binding domain homologue ISN31_13005 PF02769 AIR synthase related protein, C-terminal domain ISN31_13005 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal ISN31_13005 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ISN31_13010 PF10411 Disulfide bond isomerase protein N-terminus ISN31_13010 PF13098 Thioredoxin-like domain ISN31_13015 PF00589 Phage integrase family ISN31_13015 PF02899 Phage integrase, N-terminal SAM-like domain ISN31_13040 PF02789 Cytosol aminopeptidase family, N-terminal domain ISN31_13040 PF00883 Cytosol aminopeptidase family, catalytic domain ISN31_13045 PF04364 DNA polymerase III chi subunit, HolC ISN31_13060 PF10458 Valyl tRNA synthetase tRNA binding arm ISN31_13060 PF08264 Anticodon-binding domain of tRNA ISN31_13060 PF00133 tRNA synthetases class I (I, L, M and V) ISN31_13085 PF01066 CDP-alcohol phosphatidyltransferase ISN31_13095 PF04073 Aminoacyl-tRNA editing domain ISN31_13095 PF03129 Anticodon binding domain ISN31_13095 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ISN31_13100 PF00816 H-NS histone family ISN31_13110 PF02405 Permease MlaE ISN31_13115 PF00005 ABC transporter ISN31_13120 PF03886 ABC-type transport auxiliary lipoprotein component ISN31_13120 PF02470 MlaD protein ISN31_13140 PF14307 Glycosyltransferase WbsX ISN31_13140 PF05045 Rhamnan synthesis protein F ISN31_13145 PF01144 Coenzyme A transferase ISN31_13150 PF01144 Coenzyme A transferase ISN31_13155 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ISN31_13155 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ISN31_13155 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ISN31_13155 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ISN31_13160 PF00483 Nucleotidyl transferase ISN31_13160 PF01050 Mannose-6-phosphate isomerase ISN31_13165 PF04321 RmlD substrate binding domain ISN31_13170 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase ISN31_13175 PF00483 Nucleotidyl transferase ISN31_13180 PF16363 GDP-mannose 4,6 dehydratase ISN31_13185 PF01012 Electron transfer flavoprotein domain ISN31_13190 PF01012 Electron transfer flavoprotein domain ISN31_13190 PF00766 Electron transfer flavoprotein FAD-binding domain ISN31_13200 PF01040 UbiA prenyltransferase family ISN31_13205 PF04030 D-arabinono-1,4-lactone oxidase ISN31_13205 PF01565 FAD binding domain ISN31_13210 PF00106 short chain dehydrogenase ISN31_13215 PF01370 NAD dependent epimerase/dehydratase family ISN31_13235 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ISN31_13235 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISN31_13270 PF00535 Glycosyl transferase family 2 ISN31_13275 PF00535 Glycosyl transferase family 2 ISN31_13280 PF00398 Ribosomal RNA adenine dimethylase ISN31_13285 PF00005 ABC transporter ISN31_13295 PF01053 Cys/Met metabolism PLP-dependent enzyme ISN31_13300 PF00291 Pyridoxal-phosphate dependent enzyme ISN31_13300 PF00571 CBS domain ISN31_13320 PF00437 Type II/IV secretion system protein ISN31_13325 PF14497 Glutathione S-transferase, C-terminal domain ISN31_13325 PF02798 Glutathione S-transferase, N-terminal domain ISN31_13335 PF00270 DEAD/DEAH box helicase ISN31_13335 PF00271 Helicase conserved C-terminal domain ISN31_13340 PF01242 6-pyruvoyl tetrahydropterin synthase ISN31_13355 PF13185 GAF domain ISN31_13365 PF00593 TonB dependent receptor ISN31_13365 PF07715 TonB-dependent Receptor Plug Domain ISN31_13375 PF13419 Haloacid dehalogenase-like hydrolase ISN31_13380 PF11799 impB/mucB/samB family C-terminal domain ISN31_13380 PF00817 impB/mucB/samB family ISN31_13380 PF11798 IMS family HHH motif ISN31_13385 PF07977 FabA-like domain ISN31_13390 PF02801 Beta-ketoacyl synthase, C-terminal domain ISN31_13390 PF00109 Beta-ketoacyl synthase, N-terminal domain ISN31_13400 PF01432 Peptidase family M3 ISN31_13405 PF00291 Pyridoxal-phosphate dependent enzyme ISN31_13415 PF00403 Heavy-metal-associated domain ISN31_13420 PF09278 MerR, DNA binding ISN31_13420 PF00376 MerR family regulatory protein ISN31_13430 PF07732 Multicopper oxidase ISN31_13430 PF00394 Multicopper oxidase ISN31_13430 PF07731 Multicopper oxidase ISN31_13435 PF05275 Copper resistance protein B precursor (CopB) ISN31_13445 PF01380 SIS domain ISN31_13450 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISN31_13455 PF00005 ABC transporter ISN31_13460 PF02687 FtsX-like permease family ISN31_13460 PF00005 ABC transporter ISN31_13460 PF12704 MacB-like periplasmic core domain ISN31_13465 PF12704 MacB-like periplasmic core domain ISN31_13465 PF02687 FtsX-like permease family ISN31_13465 PF00005 ABC transporter ISN31_13470 PF00072 Response regulator receiver domain ISN31_13470 PF02954 Bacterial regulatory protein, Fis family ISN31_13470 PF00158 Sigma-54 interaction domain ISN31_13475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN31_13475 PF00512 His Kinase A (phospho-acceptor) domain ISN31_13475 PF00989 PAS fold ISN31_13485 PF12804 MobA-like NTP transferase domain ISN31_13485 PF14602 Hexapeptide repeat of succinyl-transferase ISN31_13485 PF00132 Bacterial transferase hexapeptide (six repeats) ISN31_13500 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ISN31_13500 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain ISN31_13505 PF02874 ATP synthase alpha/beta family, beta-barrel domain ISN31_13505 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISN31_13510 PF00231 ATP synthase ISN31_13515 PF00306 ATP synthase alpha/beta chain, C terminal domain ISN31_13515 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISN31_13515 PF02874 ATP synthase alpha/beta family, beta-barrel domain ISN31_13520 PF00213 ATP synthase delta (OSCP) subunit ISN31_13525 PF00430 ATP synthase B/B' CF(0) ISN31_13530 PF00137 ATP synthase subunit C ISN31_13535 PF00119 ATP synthase A chain ISN31_13550 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISN31_13550 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISN31_13555 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ISN31_13555 PF00364 Biotin-requiring enzyme ISN31_13555 PF02817 e3 binding domain ISN31_13580 PF03180 NLPA lipoprotein ISN31_13585 PF00528 Binding-protein-dependent transport system inner membrane component ISN31_13590 PF00005 ABC transporter ISN31_13590 PF09383 NIL domain ISN31_13595 PF00892 EamA-like transporter family ISN31_13600 PF04461 Protein of unknown function (DUF520) ISN31_13610 PF00849 RNA pseudouridylate synthase ISN31_13610 PF01479 S4 domain ISN31_13615 PF05175 Methyltransferase small domain ISN31_13615 PF08468 Methyltransferase small domain N-terminal ISN31_13625 PF07995 Glucose / Sorbosone dehydrogenase ISN31_13635 PF01627 Hpt domain ISN31_13635 PF00512 His Kinase A (phospho-acceptor) domain ISN31_13635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN31_13635 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISN31_13635 PF00072 Response regulator receiver domain ISN31_13635 PF00989 PAS fold ISN31_13655 PF01168 Alanine racemase, N-terminal domain ISN31_13655 PF00842 Alanine racemase, C-terminal domain ISN31_13660 PF01266 FAD dependent oxidoreductase ISN31_13665 PF01037 Lrp/AsnC ligand binding domain ISN31_13680 PF01641 SelR domain ISN31_13685 PF01618 MotA/TolQ/ExbB proton channel family ISN31_13690 PF00691 OmpA family ISN31_13690 PF13677 Membrane MotB of proton-channel complex MotA/MotB ISN31_13725 PF01061 ABC-2 type transporter ISN31_13730 PF00005 ABC transporter ISN31_13735 PF00999 Sodium/hydrogen exchanger family ISN31_13740 PF05711 Macrocin-O-methyltransferase (TylF) ISN31_13745 PF02469 Fasciclin domain ISN31_13750 PF03167 Uracil DNA glycosylase superfamily ISN31_13765 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ISN31_13770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISN31_13770 PF03466 LysR substrate binding domain ISN31_13775 PF03358 NADPH-dependent FMN reductase ISN31_13785 PF00248 Aldo/keto reductase family ISN31_13795 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ISN31_13795 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ISN31_13800 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family ISN31_13820 PF17151 Periplasmic sensor domain ISN31_13820 PF00990 Diguanylate cyclase, GGDEF domain ISN31_13825 PF00355 Rieske [2Fe-2S] domain ISN31_13830 PF08448 PAS fold ISN31_13830 PF08447 PAS fold ISN31_13830 PF00990 Diguanylate cyclase, GGDEF domain ISN31_13830 PF00563 EAL domain ISN31_13850 PF08889 WbqC-like protein family ISN31_13855 PF00535 Glycosyl transferase family 2 ISN31_13860 PF13649 Methyltransferase domain ISN31_13870 PF00892 EamA-like transporter family ISN31_13880 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ISN31_13890 PF07715 TonB-dependent Receptor Plug Domain ISN31_13890 PF00593 TonB dependent receptor ISN31_13905 PF04397 LytTr DNA-binding domain ISN31_13905 PF00072 Response regulator receiver domain ISN31_13910 PF06580 Histidine kinase ISN31_13910 PF07694 5TMR of 5TMR-LYT ISN31_13915 PF04199 Putative cyclase ISN31_13935 PF13520 Amino acid permease ISN31_13945 PF00553 Cellulose binding domain ISN31_13945 PF00150 Cellulase (glycosyl hydrolase family 5) ISN31_13955 PF01204 Trehalase ISN31_13960 PF01464 Transglycosylase SLT domain ISN31_13975 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISN31_13980 PF12833 Helix-turn-helix domain ISN31_13980 PF06719 AraC-type transcriptional regulator N-terminus ISN31_13990 PF01544 CorA-like Mg2+ transporter protein ISN31_13995 PF00324 Amino acid permease ISN31_14000 PF00892 EamA-like transporter family ISN31_14015 PF07759 Protein of unknown function (DUF1615) ISN31_14020 PF08532 Beta-galactosidase trimerisation domain ISN31_14020 PF08533 Beta-galactosidase C-terminal domain ISN31_14020 PF02449 Beta-galactosidase ISN31_14025 PF00561 alpha/beta hydrolase fold ISN31_14130 PF01555 DNA methylase ISN31_14140 PF00456 Transketolase, thiamine diphosphate binding domain ISN31_14140 PF17831 Pyruvate dehydrogenase E1 component middle domain ISN31_14145 PF02743 Cache domain ISN31_14145 PF00672 HAMP domain ISN31_14145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN31_14160 PF04264 YceI-like domain ISN31_14165 PF00881 Nitroreductase family ISN31_14190 PF03009 Glycerophosphoryl diester phosphodiesterase family ISN31_14205 PF03710 Glutamate-ammonia ligase adenylyltransferase ISN31_14205 PF08335 GlnD PII-uridylyltransferase ISN31_14215 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain ISN31_14215 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain ISN31_14220 PF01541 GIY-YIG catalytic domain ISN31_14225 PF00793 DAHP synthetase I family ISN31_14230 PF00118 TCP-1/cpn60 chaperonin family ISN31_14235 PF00166 Chaperonin 10 Kd subunit ISN31_14245 PF03091 CutA1 divalent ion tolerance protein ISN31_14250 PF02683 Cytochrome C biogenesis protein transmembrane region ISN31_14250 PF11412 Disulphide bond corrector protein DsbC ISN31_14255 PF00578 AhpC/TSA family ISN31_14265 PF01220 Dehydroquinase class II ISN31_14270 PF00364 Biotin-requiring enzyme ISN31_14275 PF02785 Biotin carboxylase C-terminal domain ISN31_14275 PF00289 Biotin carboxylase, N-terminal domain ISN31_14275 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ISN31_14300 PF01381 Helix-turn-helix ISN31_14310 PF02954 Bacterial regulatory protein, Fis family ISN31_14335 PF12147 Putative methyltransferase ISN31_14335 PF12146 Serine aminopeptidase, S33 ISN31_14340 PF01066 CDP-alcohol phosphatidyltransferase ISN31_14345 PF01808 AICARFT/IMPCHase bienzyme ISN31_14345 PF02142 MGS-like domain ISN31_14350 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ISN31_14350 PF02843 Phosphoribosylglycinamide synthetase, C domain ISN31_14350 PF02844 Phosphoribosylglycinamide synthetase, N domain ISN31_14355 PF12805 FUSC-like inner membrane protein yccS ISN31_14360 PF07690 Major Facilitator Superfamily ISN31_14365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISN31_14365 PF03466 LysR substrate binding domain ISN31_14400 PF00293 NUDIX domain ISN31_14400 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain ISN31_14400 PF09297 NADH pyrophosphatase zinc ribbon domain ISN31_14405 PF01521 Iron-sulphur cluster biosynthesis ISN31_14425 PF00563 EAL domain ISN31_14425 PF00990 Diguanylate cyclase, GGDEF domain ISN31_14425 PF00072 Response regulator receiver domain ISN31_14430 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ISN31_14430 PF00072 Response regulator receiver domain ISN31_14430 PF01627 Hpt domain ISN31_14430 PF00512 His Kinase A (phospho-acceptor) domain ISN31_14430 PF00672 HAMP domain ISN31_14430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN31_14435 PF00210 Ferritin-like domain ISN31_14440 PF04324 BFD-like [2Fe-2S] binding domain ISN31_14445 PF00293 NUDIX domain ISN31_14460 PF00380 Ribosomal protein S9/S16 ISN31_14465 PF00572 Ribosomal protein L13 ISN31_14470 PF03232 Ubiquinone biosynthesis protein COQ7 ISN31_14480 PF00893 Small Multidrug Resistance protein ISN31_14485 PF02675 S-adenosylmethionine decarboxylase ISN31_14490 PF00027 Cyclic nucleotide-binding domain ISN31_14490 PF00325 Bacterial regulatory proteins, crp family ISN31_14495 PF01925 Sulfite exporter TauE/SafE ISN31_14505 PF00218 Indole-3-glycerol phosphate synthase ISN31_14510 PF02885 Glycosyl transferase family, helical bundle domain ISN31_14510 PF00591 Glycosyl transferase family, a/b domain ISN31_14515 PF00117 Glutamine amidotransferase class-I ISN31_14520 PF01212 Beta-eliminating lyase ISN31_14525 PF04715 Anthranilate synthase component I, N terminal region ISN31_14525 PF00425 chorismate binding enzyme ISN31_14530 PF00781 Diacylglycerol kinase catalytic domain ISN31_14535 PF00583 Acetyltransferase (GNAT) family ISN31_14540 PF00834 Ribulose-phosphate 3 epimerase family ISN31_14545 PF00226 DnaJ domain ISN31_14545 PF05099 Tellurite resistance protein TerB ISN31_14550 PF01259 SAICAR synthetase ISN31_14560 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family ISN31_14565 PF13244 Domain of unknown function (DUF4040) ISN31_14565 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter ISN31_14565 PF00361 Proton-conducting membrane transporter ISN31_14565 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ISN31_14570 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ISN31_14575 PF00361 Proton-conducting membrane transporter ISN31_14580 PF01899 Na+/H+ ion antiporter subunit ISN31_14585 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) ISN31_14590 PF03334 Na+/H+ antiporter subunit ISN31_14595 PF01699 Sodium/calcium exchanger protein ISN31_14615 PF04209 homogentisate 1,2-dioxygenase ISN31_14620 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ISN31_14635 PF00854 POT family ISN31_14640 PF03301 Tryptophan 2,3-dioxygenase ISN31_14655 PF00676 Dehydrogenase E1 component ISN31_14660 PF02780 Transketolase, C-terminal domain ISN31_14660 PF02779 Transketolase, pyrimidine binding domain ISN31_14670 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ISN31_14670 PF00364 Biotin-requiring enzyme ISN31_14670 PF02817 e3 binding domain ISN31_14690 PF00270 DEAD/DEAH box helicase ISN31_14690 PF00271 Helicase conserved C-terminal domain ISN31_14710 PF00294 pfkB family carbohydrate kinase ISN31_14715 PF00990 Diguanylate cyclase, GGDEF domain ISN31_14720 PF05661 Protein of unknown function (DUF808) ISN31_14725 PF02734 DAK2 domain ISN31_14725 PF02733 Dak1 domain ISN31_14740 PF00924 Mechanosensitive ion channel ISN31_14740 PF12795 Mechanosensitive ion channel porin domain ISN31_14740 PF12794 Mechanosensitive ion channel inner membrane domain 1 ISN31_14745 PF14765 Polyketide synthase dehydratase ISN31_14745 PF08240 Alcohol dehydrogenase GroES-like domain ISN31_14745 PF00550 Phosphopantetheine attachment site ISN31_14745 PF00107 Zinc-binding dehydrogenase ISN31_14745 PF08659 KR domain ISN31_14745 PF02801 Beta-ketoacyl synthase, C-terminal domain ISN31_14745 PF00109 Beta-ketoacyl synthase, N-terminal domain ISN31_14745 PF16197 Ketoacyl-synthetase C-terminal extension ISN31_14745 PF00698 Acyl transferase domain ISN31_14750 PF00328 Histidine phosphatase superfamily (branch 2) ISN31_14765 PF04542 Sigma-70 region 2 ISN31_14765 PF08281 Sigma-70, region 4 ISN31_14765 PF12680 SnoaL-like domain ISN31_14770 PF05726 Pirin C-terminal cupin domain ISN31_14770 PF02678 Pirin ISN31_14780 PF07729 FCD domain ISN31_14780 PF00392 Bacterial regulatory proteins, gntR family ISN31_14795 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase ISN31_14800 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG ISN31_14810 PF01039 Carboxyl transferase domain ISN31_14815 PF06857 Malonate decarboxylase delta subunit (MdcD) ISN31_14820 PF16957 Malonate decarboxylase, alpha subunit, transporter ISN31_14825 PF09339 IclR helix-turn-helix domain ISN31_14825 PF01614 Bacterial transcriptional regulator ISN31_14830 PF07690 Major Facilitator Superfamily ISN31_14835 PF05336 L-rhamnose mutarotase ISN31_14840 PF13378 Enolase C-terminal domain-like ISN31_14840 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ISN31_14845 PF01557 Fumarylacetoacetate (FAA) hydrolase family ISN31_14860 PF00248 Aldo/keto reductase family ISN31_14865 PF13419 Haloacid dehalogenase-like hydrolase ISN31_14880 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISN31_14880 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISN31_14885 PF00230 Major intrinsic protein ISN31_14890 PF01266 FAD dependent oxidoreductase ISN31_14890 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ISN31_14895 PF00455 DeoR C terminal sensor domain ISN31_14895 PF08220 DeoR-like helix-turn-helix domain ISN31_14900 PF07308 Protein of unknown function (DUF1456) ISN31_14920 PF07715 TonB-dependent Receptor Plug Domain ISN31_14920 PF00593 TonB dependent receptor ISN31_14925 PF00593 TonB dependent receptor ISN31_14925 PF07715 TonB-dependent Receptor Plug Domain ISN31_14925 PF07660 Secretin and TonB N terminus short domain ISN31_14940 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region ISN31_14940 PF00326 Prolyl oligopeptidase family ISN31_14955 PF00593 TonB dependent receptor ISN31_14955 PF07715 TonB-dependent Receptor Plug Domain ISN31_15025 PF13180 PDZ domain ISN31_15025 PF00595 PDZ domain ISN31_15045 PF01594 AI-2E family transporter ISN31_15050 PF13419 Haloacid dehalogenase-like hydrolase ISN31_15055 PF00883 Cytosol aminopeptidase family, catalytic domain ISN31_15055 PF02789 Cytosol aminopeptidase family, N-terminal domain ISN31_15060 PF00199 Catalase ISN31_15085 PF00005 ABC transporter ISN31_15090 PF12704 MacB-like periplasmic core domain ISN31_15090 PF02687 FtsX-like permease family ISN31_15100 PF00561 alpha/beta hydrolase fold ISN31_15105 PF00892 EamA-like transporter family ISN31_15110 PF00892 EamA-like transporter family ISN31_15120 PF00753 Metallo-beta-lactamase superfamily ISN31_15125 PF00579 tRNA synthetases class I (W and Y) ISN31_15145 PF00491 Arginase family ISN31_15160 PF03309 Type III pantothenate kinase ISN31_15165 PF03099 Biotin/lipoate A/B protein ligase family ISN31_15165 PF02237 Biotin protein ligase C terminal domain ISN31_15175 PF06167 Glucose-regulated metallo-peptidase M90 ISN31_15190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN31_15195 PF00486 Transcriptional regulatory protein, C terminal ISN31_15195 PF00072 Response regulator receiver domain ISN31_15205 PF01207 Dihydrouridine synthase (Dus) ISN31_15210 PF01717 Cobalamin-independent synthase, Catalytic domain ISN31_15210 PF08267 Cobalamin-independent synthase, N-terminal domain ISN31_15220 PF00551 Formyl transferase ISN31_15230 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ISN31_15230 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ISN31_15235 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ISN31_15240 PF02146 Sir2 family ISN31_15245 PF07690 Major Facilitator Superfamily ISN31_15250 PF03466 LysR substrate binding domain ISN31_15250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISN31_15265 PF00268 Ribonucleotide reductase, small chain ISN31_15270 PF00317 Ribonucleotide reductase, all-alpha domain ISN31_15270 PF03477 ATP cone domain ISN31_15270 PF02867 Ribonucleotide reductase, barrel domain ISN31_15280 PF02566 OsmC-like protein ISN31_15285 PF01047 MarR family ISN31_15290 PF03969 AFG1-like ATPase ISN31_15305 PF07683 Cobalamin synthesis protein cobW C-terminal domain ISN31_15305 PF02492 CobW/HypB/UreG, nucleotide-binding domain ISN31_15315 PF02694 Uncharacterised BCR, YnfA/UPF0060 family ISN31_15325 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ISN31_15335 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ISN31_15335 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ISN31_15335 PF02770 Acyl-CoA dehydrogenase, middle domain ISN31_15340 PF01039 Carboxyl transferase domain ISN31_15350 PF00364 Biotin-requiring enzyme ISN31_15350 PF00289 Biotin carboxylase, N-terminal domain ISN31_15350 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ISN31_15350 PF02785 Biotin carboxylase C-terminal domain ISN31_15360 PF00313 'Cold-shock' DNA-binding domain ISN31_15370 PF13607 Succinyl-CoA ligase like flavodoxin domain ISN31_15370 PF13380 CoA binding domain ISN31_15370 PF00583 Acetyltransferase (GNAT) family ISN31_15380 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ISN31_15380 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ISN31_15385 PF00723 Glycosyl hydrolases family 15 ISN31_15390 PF00486 Transcriptional regulatory protein, C terminal ISN31_15390 PF00072 Response regulator receiver domain ISN31_15395 PF13188 PAS domain ISN31_15395 PF00072 Response regulator receiver domain ISN31_15395 PF08448 PAS fold ISN31_15395 PF00512 His Kinase A (phospho-acceptor) domain ISN31_15395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN31_15400 PF13018 Extended Signal Peptide of Type V secretion system ISN31_15400 PF05658 Head domain of trimeric autotransporter adhesin ISN31_15400 PF05662 Coiled stalk of trimeric autotransporter adhesin ISN31_15400 PF03895 YadA-like membrane anchor domain ISN31_15415 PF05166 YcgL domain ISN31_15420 PF02801 Beta-ketoacyl synthase, C-terminal domain ISN31_15420 PF00109 Beta-ketoacyl synthase, N-terminal domain ISN31_15430 PF00535 Glycosyl transferase family 2 ISN31_15435 PF01494 FAD binding domain ISN31_15440 PF00106 short chain dehydrogenase ISN31_15465 PF07977 FabA-like domain ISN31_15480 PF00550 Phosphopantetheine attachment site ISN31_15485 PF04820 Tryptophan halogenase ISN31_15505 PF02322 Cytochrome bd terminal oxidase subunit II ISN31_15510 PF01654 Cytochrome bd terminal oxidase subunit I ISN31_15530 PF01218 Coproporphyrinogen III oxidase ISN31_15540 PF04239 Protein of unknown function (DUF421) ISN31_15545 PF00476 DNA polymerase family A ISN31_15545 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ISN31_15545 PF01367 5'-3' exonuclease, C-terminal SAM fold ISN31_15545 PF01612 3'-5' exonuclease ISN31_15560 PF00582 Universal stress protein family ISN31_15565 PF12464 Maltose acetyltransferase ISN31_15565 PF14602 Hexapeptide repeat of succinyl-transferase ISN31_15585 PF13361 UvrD-like helicase C-terminal domain ISN31_15585 PF00580 UvrD/REP helicase N-terminal domain ISN31_15595 PF13091 PLD-like domain ISN31_15595 PF13396 Phospholipase_D-nuclease N-terminal ISN31_15600 PF00471 Ribosomal protein L33 ISN31_15605 PF00830 Ribosomal L28 family ISN31_15635 PF00535 Glycosyl transferase family 2 ISN31_15640 PF01370 NAD dependent epimerase/dehydratase family ISN31_15645 PF17762 HTH domain found in ParB protein ISN31_15645 PF02195 ParB-like nuclease domain ISN31_15650 PF13614 AAA domain ISN31_15655 PF02527 rRNA small subunit methyltransferase G ISN31_15665 PF01648 4'-phosphopantetheinyl transferase superfamily ISN31_15670 PF04226 Transglycosylase associated protein ISN31_15685 PF00171 Aldehyde dehydrogenase family ISN31_15690 PF07690 Major Facilitator Superfamily ISN31_15700 PF16177 Acetyl-coenzyme A synthetase N-terminus ISN31_15700 PF00501 AMP-binding enzyme ISN31_15700 PF13193 AMP-binding enzyme C-terminal domain ISN31_15705 PF00196 Bacterial regulatory proteins, luxR family ISN31_15705 PF00072 Response regulator receiver domain ISN31_15710 PF02659 Putative manganese efflux pump ISN31_15715 PF00512 His Kinase A (phospho-acceptor) domain ISN31_15715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN31_15725 PF01434 Peptidase family M41 ISN31_15725 PF00004 ATPase family associated with various cellular activities (AAA) ISN31_15725 PF17862 AAA+ lid domain ISN31_15730 PF06165 Glycosyltransferase family 36 ISN31_15730 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain ISN31_15745 PF00982 Glycosyltransferase family 20 ISN31_15755 PF04357 TamB, inner membrane protein subunit of TAM complex ISN31_15760 PF17243 POTRA domain TamA domain 1 ISN31_15760 PF01103 Surface antigen ISN31_15760 PF07244 Surface antigen variable number repeat ISN31_15780 PF04337 Protein of unknown function, DUF480 ISN31_15795 PF13332 Hemagglutinin repeat ISN31_15795 PF13332 Hemagglutinin repeat ISN31_15795 PF05860 haemagglutination activity domain ISN31_15795 PF04829 Pre-toxin domain with VENN motif ISN31_15795 PF04829 Pre-toxin domain with VENN motif ISN31_15795 PF05860 haemagglutination activity domain ISN31_15800 PF08479 POTRA domain, ShlB-type ISN31_15800 PF17287 POTRA domain ISN31_15800 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ISN31_15810 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ISN31_15815 PF04820 Tryptophan halogenase ISN31_15825 PF00356 Bacterial regulatory proteins, lacI family ISN31_15835 PF01553 Acyltransferase ISN31_15855 PF04616 Glycosyl hydrolases family 43 ISN31_15875 PF00331 Glycosyl hydrolase family 10 ISN31_15875 PF03422 Carbohydrate binding module (family 6) ISN31_15875 PF00553 Cellulose binding domain ISN31_15880 PF02614 Glucuronate isomerase ISN31_15885 PF00331 Glycosyl hydrolase family 10 ISN31_15895 PF08450 SMP-30/Gluconolactonase/LRE-like region ISN31_15925 PF01232 Mannitol dehydrogenase Rossmann domain ISN31_15925 PF08125 Mannitol dehydrogenase C-terminal domain ISN31_15930 PF07691 PA14 domain ISN31_15930 PF01915 Glycosyl hydrolase family 3 C-terminal domain ISN31_15930 PF00933 Glycosyl hydrolase family 3 N terminal domain ISN31_15930 PF14310 Fibronectin type III-like domain ISN31_15935 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain ISN31_15935 PF04616 Glycosyl hydrolases family 43 ISN31_15940 PF13378 Enolase C-terminal domain-like ISN31_15940 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ISN31_15950 PF07488 Glycosyl hydrolase family 67 middle domain ISN31_15950 PF07477 Glycosyl hydrolase family 67 C-terminus ISN31_15950 PF03648 Glycosyl hydrolase family 67 N-terminus ISN31_15955 PF00356 Bacterial regulatory proteins, lacI family ISN31_15965 PF01171 PP-loop family ISN31_15970 PF04381 Putative exonuclease, RdgC ISN31_15980 PF12697 Alpha/beta hydrolase family ISN31_15985 PF00762 Ferrochelatase ISN31_15995 PF02416 mttA/Hcf106 family ISN31_16000 PF02416 mttA/Hcf106 family ISN31_16005 PF00902 Sec-independent protein translocase protein (TatC) ISN31_16015 PF00117 Glutamine amidotransferase class-I ISN31_16015 PF00958 GMP synthase C terminal domain ISN31_16020 PF00437 Type II/IV secretion system protein ISN31_16020 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ISN31_16025 PF02091 Glycyl-tRNA synthetase alpha subunit ISN31_16035 PF05746 DALR anticodon binding domain ISN31_16035 PF02092 Glycyl-tRNA synthetase beta subunit ISN31_16040 PF13361 UvrD-like helicase C-terminal domain ISN31_16040 PF00580 UvrD/REP helicase N-terminal domain ISN31_16045 PF00265 Thymidine kinase ISN31_16055 PF04349 Periplasmic glucan biosynthesis protein, MdoG ISN31_16070 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ISN31_16070 PF06827 Zinc finger found in FPG and IleRS ISN31_16070 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ISN31_16085 PF00005 ABC transporter ISN31_16090 PF12631 MnmE helical domain ISN31_16090 PF10396 GTP-binding protein TrmE N-terminus ISN31_16090 PF01926 50S ribosome-binding GTPase ISN31_16095 PF02096 60Kd inner membrane protein ISN31_16095 PF14849 YidC periplasmic domain ISN31_16100 PF00825 Ribonuclease P ISN31_16105 PF00468 Ribosomal protein L34 ISN31_16110 PF00308 Bacterial dnaA protein ISN31_16110 PF08299 Bacterial dnaA protein helix-turn-helix ISN31_16110 PF11638 DnaA N-terminal domain ISN31_16115 PF02768 DNA polymerase III beta subunit, C-terminal domain ISN31_16115 PF02767 DNA polymerase III beta subunit, central domain ISN31_16115 PF00712 DNA polymerase III beta subunit, N-terminal domain ISN31_16120 PF02463 RecF/RecN/SMC N terminal domain ISN31_16125 PF00204 DNA gyrase B ISN31_16125 PF00986 DNA gyrase B subunit, carboxyl terminus ISN31_16125 PF18053 DNA gyrase B subunit insert domain ISN31_16125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN31_16125 PF01751 Toprim domain ISN31_16130 PF02517 CPBP intramembrane metalloprotease ISN31_16135 PF01435 Peptidase family M48 ISN31_16145 PF03544 Gram-negative bacterial TonB protein C-terminal ISN31_16150 PF01618 MotA/TolQ/ExbB proton channel family ISN31_16155 PF02472 Biopolymer transport protein ExbD/TolR ISN31_16160 PF02472 Biopolymer transport protein ExbD/TolR ISN31_16165 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ISN31_16175 PF13396 Phospholipase_D-nuclease N-terminal ISN31_16175 PF13091 PLD-like domain ISN31_16180 PF04055 Radical SAM superfamily ISN31_16190 PF01810 LysE type translocator ISN31_16195 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain ISN31_16200 PF00155 Aminotransferase class I and II ISN31_16205 PF07715 TonB-dependent Receptor Plug Domain ISN31_16205 PF00593 TonB dependent receptor ISN31_16215 PF00158 Sigma-54 interaction domain ISN31_16215 PF02954 Bacterial regulatory protein, Fis family ISN31_16215 PF01590 GAF domain ISN31_16220 PF00171 Aldehyde dehydrogenase family ISN31_16225 PF08240 Alcohol dehydrogenase GroES-like domain ISN31_16225 PF00107 Zinc-binding dehydrogenase ISN31_16245 PF02735 Ku70/Ku80 beta-barrel domain ISN31_16250 PF01068 ATP dependent DNA ligase domain ISN31_16250 PF04679 ATP dependent DNA ligase C terminal region ISN31_16250 PF13298 DNA polymerase Ligase (LigD) ISN31_16255 PF01070 FMN-dependent dehydrogenase ISN31_16260 PF07729 FCD domain ISN31_16260 PF00392 Bacterial regulatory proteins, gntR family ISN31_16275 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase ISN31_16275 PF12241 Trans-2-enoyl-CoA reductase catalytic region ISN31_16275 PF07055 Enoyl reductase FAD binding domain ISN31_16280 PF00294 pfkB family carbohydrate kinase ISN31_16345 PF01804 Penicillin amidase ISN31_16365 PF02677 Epoxyqueuosine reductase QueH ISN31_16385 PF07715 TonB-dependent Receptor Plug Domain ISN31_16385 PF00593 TonB dependent receptor ISN31_16415 PF00135 Carboxylesterase family ISN31_16430 PF03480 Bacterial extracellular solute-binding protein, family 7 ISN31_16440 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ISN31_16445 PF04616 Glycosyl hydrolases family 43 ISN31_16445 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain ISN31_16450 PF00356 Bacterial regulatory proteins, lacI family ISN31_16460 PF04962 KduI/IolB family ISN31_16480 PF00351 Biopterin-dependent aromatic amino acid hydroxylase ISN31_16485 PF01037 Lrp/AsnC ligand binding domain ISN31_16525 PF01734 Patatin-like phospholipase ISN31_16535 PF01569 PAP2 superfamily ISN31_16540 PF01569 PAP2 superfamily ISN31_16550 PF03741 Integral membrane protein TerC family ISN31_16555 PF10672 S-adenosylmethionine-dependent methyltransferase ISN31_16555 PF17785 PUA-like domain ISN31_16580 PF04820 Tryptophan halogenase ISN31_16590 PF02595 Glycerate kinase family ISN31_16595 PF10947 Protein of unknown function (DUF2628) ISN31_16600 PF13520 Amino acid permease ISN31_16605 PF00072 Response regulator receiver domain ISN31_16605 PF00196 Bacterial regulatory proteins, luxR family ISN31_16610 PF00989 PAS fold ISN31_16610 PF13426 PAS domain ISN31_16610 PF13493 Domain of unknown function (DUF4118) ISN31_16610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN31_16610 PF08447 PAS fold ISN31_16610 PF00512 His Kinase A (phospho-acceptor) domain ISN31_16615 PF02308 MgtC family ISN31_16630 PF02646 RmuC family ISN31_16635 PF00255 Glutathione peroxidase ISN31_16640 PF04333 MlaA lipoprotein ISN31_16655 PF02470 MlaD protein ISN31_16660 PF02405 Permease MlaE ISN31_16665 PF00005 ABC transporter ISN31_16670 PF17946 RecC C-terminal domain ISN31_16675 PF12705 PD-(D/E)XK nuclease superfamily ISN31_16675 PF00580 UvrD/REP helicase N-terminal domain ISN31_16675 PF13361 UvrD-like helicase C-terminal domain ISN31_16680 PF13538 UvrD-like helicase C-terminal domain ISN31_16700 PF01230 HIT domain ISN31_16705 PF05016 ParE toxin of type II toxin-antitoxin system, parDE ISN31_16710 PF09386 Antitoxin ParD ISN31_16725 PF01177 Asp/Glu/Hydantoin racemase ISN31_16775 PF00083 Sugar (and other) transporter ISN31_16780 PF01227 GTP cyclohydrolase I ISN31_16805 PF01925 Sulfite exporter TauE/SafE ISN31_16810 PF02810 SEC-C motif ISN31_16825 PF13406 Transglycosylase SLT domain ISN31_16830 PF07690 Major Facilitator Superfamily ISN31_16835 PF01126 Heme oxygenase ISN31_16840 PF08446 PAS fold ISN31_16840 PF01590 GAF domain ISN31_16840 PF00360 Phytochrome region ISN31_16840 PF13426 PAS domain ISN31_16880 PF02142 MGS-like domain ISN31_16885 PF00150 Cellulase (glycosyl hydrolase family 5) ISN31_16890 PF00150 Cellulase (glycosyl hydrolase family 5) ISN31_16895 PF00150 Cellulase (glycosyl hydrolase family 5) ISN31_16900 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ISN31_16900 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISN31_16905 PF01645 Conserved region in glutamate synthase ISN31_16905 PF04898 Glutamate synthase central domain ISN31_16905 PF00310 Glutamine amidotransferases class-II ISN31_16905 PF01493 GXGXG motif ISN31_16950 PF09369 Domain of unknown function (DUF1998) ISN31_16950 PF00270 DEAD/DEAH box helicase ISN31_16950 PF00271 Helicase conserved C-terminal domain ISN31_16980 PF00083 Sugar (and other) transporter ISN31_17025 PF07015 VirC1 protein ISN31_17040 PF13091 PLD-like domain ISN31_17045 PF03061 Thioesterase superfamily ISN31_17055 PF12146 Serine aminopeptidase, S33 ISN31_17065 PF01161 Phosphatidylethanolamine-binding protein ISN31_17070 PF02673 Bacitracin resistance protein BacA ISN31_17075 PF03951 Glutamine synthetase, beta-Grasp domain ISN31_17075 PF00120 Glutamine synthetase, catalytic domain ISN31_17080 PF00543 Nitrogen regulatory protein P-II ISN31_17085 PF00909 Ammonium Transporter Family ISN31_17090 PF00989 PAS fold ISN31_17090 PF00512 His Kinase A (phospho-acceptor) domain ISN31_17090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN31_17095 PF00072 Response regulator receiver domain ISN31_17095 PF00158 Sigma-54 interaction domain ISN31_17095 PF02954 Bacterial regulatory protein, Fis family ISN31_17100 PF00080 Copper/zinc superoxide dismutase (SODC) ISN31_17105 PF00080 Copper/zinc superoxide dismutase (SODC) ISN31_17115 PF00108 Thiolase, N-terminal domain ISN31_17115 PF02803 Thiolase, C-terminal domain ISN31_17155 PF02556 Preprotein translocase subunit SecB ISN31_17160 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ISN31_17160 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ISN31_17170 PF00588 SpoU rRNA Methylase family ISN31_17180 PF00675 Insulinase (Peptidase family M16) ISN31_17180 PF05193 Peptidase M16 inactive domain ISN31_17190 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ISN31_17190 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ISN31_17195 PF13784 Fic/DOC family N-terminal ISN31_17195 PF02661 Fic/DOC family ISN31_17200 PF18273 Type III R-M EcoP15I C-terminal domain ISN31_17200 PF01555 DNA methylase ISN31_17210 PF00561 alpha/beta hydrolase fold ISN31_17220 PF03692 Putative zinc- or iron-chelating domain ISN31_17225 PF00501 AMP-binding enzyme ISN31_17235 PF00144 Beta-lactamase ISN31_17240 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family ISN31_17250 PF07478 D-ala D-ala ligase C-terminus ISN31_17250 PF01820 D-ala D-ala ligase N-terminus ISN31_17260 PF03109 ABC1 family ISN31_17265 PF02683 Cytochrome C biogenesis protein transmembrane region ISN31_17265 PF11412 Disulphide bond corrector protein DsbC ISN31_17270 PF00849 RNA pseudouridylate synthase ISN31_17280 PF00472 RF-1 domain ISN31_17290 PF01432 Peptidase family M3 ISN31_17310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISN31_17310 PF03466 LysR substrate binding domain ISN31_17315 PF01274 Malate synthase ISN31_17320 PF00463 Isocitrate lyase family ISN31_17325 PF00990 Diguanylate cyclase, GGDEF domain ISN31_17355 PF01740 STAS domain ISN31_17355 PF00916 Sulfate permease family ISN31_17385 PF12146 Serine aminopeptidase, S33 ISN31_17390 PF16884 N-terminal domain of oxidoreductase ISN31_17390 PF00107 Zinc-binding dehydrogenase ISN31_17395 PF00248 Aldo/keto reductase family ISN31_17405 PF00849 RNA pseudouridylate synthase ISN31_17415 PF08482 ATP-dependent helicase C-terminal ISN31_17415 PF00270 DEAD/DEAH box helicase ISN31_17415 PF04408 Helicase associated domain (HA2) ISN31_17415 PF00271 Helicase conserved C-terminal domain ISN31_17420 PF01026 TatD related DNase ISN31_17435 PF04972 BON domain ISN31_17435 PF00691 OmpA family ISN31_17465 PF00437 Type II/IV secretion system protein ISN31_17470 PF03958 Bacterial type II/III secretion system short domain ISN31_17470 PF00263 Bacterial type II and III secretion system protein ISN31_17510 PF01061 ABC-2 type transporter ISN31_17515 PF00005 ABC transporter ISN31_17520 PF00970 Oxidoreductase FAD-binding domain ISN31_17520 PF00111 2Fe-2S iron-sulfur cluster binding domain ISN31_17520 PF00175 Oxidoreductase NAD-binding domain ISN31_17530 PF01381 Helix-turn-helix ISN31_17535 PF00561 alpha/beta hydrolase fold ISN31_17540 PF00005 ABC transporter ISN31_17555 PF03350 Uncharacterized protein family, UPF0114 ISN31_17560 PF00043 Glutathione S-transferase, C-terminal domain ISN31_17560 PF02798 Glutathione S-transferase, N-terminal domain ISN31_17565 PF00326 Prolyl oligopeptidase family ISN31_17565 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region ISN31_17595 PF00490 Delta-aminolevulinic acid dehydratase ISN31_17615 PF00175 Oxidoreductase NAD-binding domain ISN31_17615 PF00258 Flavodoxin ISN31_17615 PF00667 FAD binding domain ISN31_17620 PF07676 WD40-like Beta Propeller Repeat ISN31_17620 PF04052 TolB amino-terminal domain ISN31_17625 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ISN31_17625 PF01488 Shikimate / quinate 5-dehydrogenase ISN31_17625 PF08501 Shikimate dehydrogenase substrate binding domain ISN31_17635 PF06733 DEAD_2 ISN31_17635 PF13307 Helicase C-terminal domain ISN31_17645 PF00199 Catalase ISN31_17645 PF06628 Catalase-related immune-responsive ISN31_17660 PF00326 Prolyl oligopeptidase family ISN31_17665 PF04993 TfoX N-terminal domain ISN31_17680 PF01594 AI-2E family transporter ISN31_17690 PF01527 Transposase ISN31_17720 PF07995 Glucose / Sorbosone dehydrogenase ISN31_17735 PF00589 Phage integrase family ISN31_17735 PF13495 Phage integrase, N-terminal SAM-like domain ISN31_17740 PF00920 Dehydratase family ISN31_17750 PF03738 Glutathionylspermidine synthase preATP-grasp ISN31_17760 PF17863 AAA lid domain ISN31_17760 PF07726 ATPase family associated with various cellular activities (AAA) ISN31_17795 PF01037 Lrp/AsnC ligand binding domain ISN31_17805 PF07690 Major Facilitator Superfamily ISN31_17810 PF00132 Bacterial transferase hexapeptide (six repeats) ISN31_17825 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISN31_17825 PF00529 HlyD membrane-fusion protein of T1SS ISN31_17830 PF00873 AcrB/AcrD/AcrF family ISN31_17835 PF02321 Outer membrane efflux protein ISN31_17840 PF00990 Diguanylate cyclase, GGDEF domain ISN31_17840 PF03707 Bacterial signalling protein N terminal repeat ISN31_17840 PF00563 EAL domain ISN31_17845 PF01134 Glucose inhibited division protein A ISN31_17845 PF13932 GidA associated domain ISN31_17855 PF00291 Pyridoxal-phosphate dependent enzyme ISN31_17870 PF13649 Methyltransferase domain ISN31_17880 PF12697 Alpha/beta hydrolase family ISN31_17885 PF00155 Aminotransferase class I and II ISN31_17890 PF06968 Biotin and Thiamin Synthesis associated domain ISN31_17890 PF04055 Radical SAM superfamily ISN31_17900 PF02355 Protein export membrane protein ISN31_17900 PF07549 SecD/SecF GG Motif ISN31_17905 PF01040 UbiA prenyltransferase family ISN31_17920 PF00463 Isocitrate lyase family ISN31_17925 PF08264 Anticodon-binding domain of tRNA ISN31_17925 PF09334 tRNA synthetases class I (M) ISN31_17930 PF07685 CobB/CobQ-like glutamine amidotransferase domain ISN31_17930 PF00155 Aminotransferase class I and II ISN31_17930 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ISN31_17940 PF07690 Major Facilitator Superfamily ISN31_17950 PF00282 Pyridoxal-dependent decarboxylase conserved domain ISN31_17980 PF00561 alpha/beta hydrolase fold ISN31_17995 PF13335 Magnesium chelatase, subunit ChlI C-terminal ISN31_17995 PF01078 Magnesium chelatase, subunit ChlI ISN31_18000 PF04380 Membrane fusogenic activity ISN31_18010 PF00543 Nitrogen regulatory protein P-II ISN31_18015 PF17284 Spermidine synthase tetramerisation domain ISN31_18020 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ISN31_18020 PF17944 Arginine decarboxylase C-terminal helical extension ISN31_18020 PF17810 Arginine decarboxylase helical bundle domain ISN31_18025 PF00668 Condensation domain ISN31_18025 PF00975 Thioesterase domain ISN31_18025 PF00550 Phosphopantetheine attachment site ISN31_18025 PF00501 AMP-binding enzyme ISN31_18025 PF13193 AMP-binding enzyme C-terminal domain ISN31_18030 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase ISN31_18030 PF03033 Glycosyltransferase family 28 N-terminal domain ISN31_18035 PF01757 Acyltransferase family ISN31_18040 PF03466 LysR substrate binding domain ISN31_18040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISN31_18060 PF00106 short chain dehydrogenase ISN31_18070 PF03485 Arginyl tRNA synthetase N terminal domain ISN31_18070 PF00750 tRNA synthetases class I (R) ISN31_18070 PF05746 DALR anticodon binding domain ISN31_18075 PF04002 RadC-like JAB domain ISN31_18080 PF02441 Flavoprotein ISN31_18080 PF04127 DNA / pantothenate metabolism flavoprotein ISN31_18085 PF00692 dUTPase ISN31_18090 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ISN31_18090 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ISN31_18090 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ISN31_18090 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ISN31_18100 PF00156 Phosphoribosyl transferase domain ISN31_18110 PF07690 Major Facilitator Superfamily ISN31_18120 PF03702 Anhydro-N-acetylmuramic acid kinase ISN31_18125 PF04225 Opacity-associated protein A LysM-like domain ISN31_18125 PF01551 Peptidase family M23 ISN31_18130 PF00579 tRNA synthetases class I (W and Y) ISN31_18160 PF00107 Zinc-binding dehydrogenase ISN31_18160 PF08240 Alcohol dehydrogenase GroES-like domain ISN31_18165 PF04389 Peptidase family M28 ISN31_18175 PF01551 Peptidase family M23 ISN31_18180 PF13180 PDZ domain ISN31_18180 PF03572 Peptidase family S41 ISN31_18200 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) ISN31_18210 PF01301 Glycosyl hydrolases family 35 ISN31_18215 PF13520 Amino acid permease ISN31_18220 PF00294 pfkB family carbohydrate kinase ISN31_18220 PF01467 Cytidylyltransferase-like ISN31_18225 PF11975 Family 4 glycosyl hydrolase C-terminal domain ISN31_18225 PF02056 Family 4 glycosyl hydrolase ISN31_18235 PF00171 Aldehyde dehydrogenase family ISN31_18235 PF14850 DNA-binding domain of Proline dehydrogenase ISN31_18235 PF18327 Proline utilization A proline dehydrogenase N-terminal domain ISN31_18235 PF01619 Proline dehydrogenase ISN31_18245 PF02790 Cytochrome C oxidase subunit II, transmembrane domain ISN31_18245 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ISN31_18250 PF00115 Cytochrome C and Quinol oxidase polypeptide I ISN31_18255 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 ISN31_18260 PF00510 Cytochrome c oxidase subunit III ISN31_18285 PF01040 UbiA prenyltransferase family ISN31_18295 PF13593 SBF-like CPA transporter family (DUF4137) ISN31_18300 PF08275 DNA primase catalytic core, N-terminal domain ISN31_18300 PF01807 CHC2 zinc finger ISN31_18300 PF10410 DnaB-helicase binding domain of primase ISN31_18300 PF08278 DNA primase DnaG DnaB-binding ISN31_18305 PF03631 Virulence factor BrkB ISN31_18315 PF01165 Ribosomal protein S21 ISN31_18320 PF00814 Glycoprotease family ISN31_18325 PF02152 Dihydroneopterin aldolase ISN31_18345 PF14403 Circularly permuted ATP-grasp type 2 ISN31_18355 PF01915 Glycosyl hydrolase family 3 C-terminal domain ISN31_18355 PF14310 Fibronectin type III-like domain ISN31_18355 PF00933 Glycosyl hydrolase family 3 N terminal domain ISN31_18360 PF07995 Glucose / Sorbosone dehydrogenase ISN31_18380 PF13520 Amino acid permease ISN31_18390 PF13378 Enolase C-terminal domain-like ISN31_18390 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ISN31_18400 PF07715 TonB-dependent Receptor Plug Domain ISN31_18400 PF00593 TonB dependent receptor ISN31_18430 PF04717 Type VI secretion system, phage-baseplate injector ISN31_18430 PF01471 Putative peptidoglycan binding domain ISN31_18465 PF07063 Domain of unknown function (DUF1338) ISN31_18475 PF00873 AcrB/AcrD/AcrF family ISN31_18480 PF00873 AcrB/AcrD/AcrF family ISN31_18485 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISN31_18495 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term ISN31_18495 PF14489 QueF-like protein ISN31_18500 PF04972 BON domain ISN31_18500 PF01476 LysM domain ISN31_18510 PF09827 CRISPR associated protein Cas2 ISN31_18515 PF01867 CRISPR associated protein Cas1 ISN31_18535 PF09704 CRISPR-associated protein (Cas_Cas5) ISN31_18550 PF03971 Monomeric isocitrate dehydrogenase ISN31_18555 PF00266 Aminotransferase class-V ISN31_18560 PF07715 TonB-dependent Receptor Plug Domain ISN31_18560 PF00593 TonB dependent receptor ISN31_18565 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) ISN31_18575 PF07497 Rho termination factor, RNA-binding domain ISN31_18575 PF07498 Rho termination factor, N-terminal domain ISN31_18575 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISN31_18580 PF00085 Thioredoxin ISN31_18585 PF00271 Helicase conserved C-terminal domain ISN31_18585 PF00270 DEAD/DEAH box helicase ISN31_18585 PF12300 ATP-dependent RNA helicase RhlB ISN31_18590 PF00005 ABC transporter ISN31_18595 PF18075 FtsX extracellular domain ISN31_18600 PF00072 Response regulator receiver domain ISN31_18600 PF01339 CheB methylesterase ISN31_18605 PF03167 Uracil DNA glycosylase superfamily ISN31_18610 PF00140 Sigma-70 factor, region 1.2 ISN31_18610 PF04545 Sigma-70, region 4 ISN31_18610 PF04542 Sigma-70 region 2 ISN31_18615 PF03458 UPF0126 domain ISN31_18620 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISN31_18630 PF18074 Primosomal protein N C-terminal domain ISN31_18630 PF00270 DEAD/DEAH box helicase ISN31_18630 PF00271 Helicase conserved C-terminal domain ISN31_18630 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ISN31_18630 PF17764 3′ DNA-binding domain (3′BD) ISN31_18640 PF01554 MatE ISN31_18645 PF01343 Peptidase family S49 ISN31_18670 PF01300 Telomere recombination ISN31_18675 PF01751 Toprim domain ISN31_18675 PF01131 DNA topoisomerase ISN31_18675 PF13368 Topoisomerase C-terminal repeat ISN31_18680 PF06271 RDD family ISN31_18685 PF07963 Prokaryotic N-terminal methylation motif ISN31_18685 PF00114 Pilin (bacterial filament) ISN31_18690 PF04361 Protein of unknown function (DUF494) ISN31_18695 PF17782 DprA winged helix domain ISN31_18695 PF02481 DNA recombination-mediator protein A ISN31_18700 PF01476 LysM domain ISN31_18705 PF01327 Polypeptide deformylase ISN31_18710 PF00551 Formyl transferase ISN31_18710 PF02911 Formyl transferase, C-terminal domain ISN31_18715 PF01029 NusB family ISN31_18715 PF01189 16S rRNA methyltransferase RsmB/F ISN31_18720 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase ISN31_18730 PF04932 O-Antigen ligase ISN31_18735 PF00535 Glycosyl transferase family 2 ISN31_18755 PF00925 GTP cyclohydrolase II ISN31_18770 PF02580 D-Tyr-tRNA(Tyr) deacylase ISN31_18775 PF04539 Sigma-70 region 3 ISN31_18775 PF04542 Sigma-70 region 2 ISN31_18775 PF04546 Sigma-70, non-essential region ISN31_18775 PF03979 Sigma-70 factor, region 1.1 ISN31_18775 PF00140 Sigma-70 factor, region 1.2 ISN31_18775 PF04545 Sigma-70, region 4 ISN31_18780 PF03377 TAL effector repeat ISN31_18800 PF07690 Major Facilitator Superfamily ISN31_18805 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISN31_18805 PF00356 Bacterial regulatory proteins, lacI family ISN31_18815 PF00128 Alpha amylase, catalytic domain ISN31_18815 PF11896 Domain of unknown function (DUF3416) ISN31_18820 PF00128 Alpha amylase, catalytic domain ISN31_18820 PF16657 Maltogenic Amylase, C-terminal domain ISN31_18825 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ISN31_18825 PF00128 Alpha amylase, catalytic domain ISN31_18825 PF02806 Alpha amylase, C-terminal all-beta domain ISN31_18845 PF03377 TAL effector repeat ISN31_18850 PF03377 TAL effector repeat ISN31_18860 PF03377 TAL effector repeat ISN31_18860 PF03377 TAL effector repeat ISN31_18865 PF03377 TAL effector repeat ISN31_18885 PF12706 Beta-lactamase superfamily domain ISN31_18890 PF00440 Bacterial regulatory proteins, tetR family ISN31_18890 PF08359 YsiA-like protein, C-terminal region ISN31_18895 PF01494 FAD binding domain ISN31_18930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN31_18930 PF02203 Tar ligand binding domain homologue ISN31_18930 PF00672 HAMP domain ISN31_18950 PF05067 Manganese containing catalase ISN31_18955 PF05974 Domain of unknown function (DUF892) ISN31_18960 PF05974 Domain of unknown function (DUF892) ISN31_18970 PF00990 Diguanylate cyclase, GGDEF domain ISN31_18970 PF00563 EAL domain ISN31_18970 PF03707 Bacterial signalling protein N terminal repeat ISN31_18975 PF06745 KaiC ISN31_18985 PF00440 Bacterial regulatory proteins, tetR family ISN31_18990 PF00111 2Fe-2S iron-sulfur cluster binding domain ISN31_18990 PF00970 Oxidoreductase FAD-binding domain ISN31_18990 PF00175 Oxidoreductase NAD-binding domain ISN31_18995 PF00487 Fatty acid desaturase ISN31_19005 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISN31_19005 PF00205 Thiamine pyrophosphate enzyme, central domain ISN31_19005 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISN31_19010 PF00512 His Kinase A (phospho-acceptor) domain ISN31_19010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN31_19015 PF00072 Response regulator receiver domain ISN31_19015 PF00158 Sigma-54 interaction domain ISN31_19015 PF02954 Bacterial regulatory protein, Fis family ISN31_19030 PF07690 Major Facilitator Superfamily ISN31_19040 PF18766 SWI2/SNF2 ATPase ISN31_19040 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) ISN31_19040 PF11867 Domain of unknown function (DUF3387) ISN31_19045 PF01420 Type I restriction modification DNA specificity domain ISN31_19060 PF02384 N-6 DNA Methylase ISN31_19060 PF12161 HsdM N-terminal domain ISN31_19075 PF10414 Sirohaem synthase dimerisation region ISN31_19075 PF14824 Sirohaem biosynthesis protein central ISN31_19075 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ISN31_19080 PF01339 CheB methylesterase ISN31_19080 PF00072 Response regulator receiver domain ISN31_19090 PF07690 Major Facilitator Superfamily ISN31_19095 PF04324 BFD-like [2Fe-2S] binding domain ISN31_19095 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ISN31_19095 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ISN31_19095 PF18267 Rubredoxin NAD+ reductase C-terminal domain ISN31_19095 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISN31_19100 PF00355 Rieske [2Fe-2S] domain ISN31_19105 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ISN31_19105 PF04324 BFD-like [2Fe-2S] binding domain ISN31_19105 PF01568 Molydopterin dinucleotide binding domain ISN31_19105 PF00384 Molybdopterin oxidoreductase ISN31_19110 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ISN31_19120 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ISN31_19120 PF00128 Alpha amylase, catalytic domain ISN31_19130 PF00128 Alpha amylase, catalytic domain ISN31_19135 PF02446 4-alpha-glucanotransferase ISN31_19140 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ISN31_19140 PF11941 Domain of unknown function (DUF3459) ISN31_19140 PF00128 Alpha amylase, catalytic domain ISN31_19145 PF00128 Alpha amylase, catalytic domain ISN31_19145 PF02806 Alpha amylase, C-terminal all-beta domain ISN31_19145 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ISN31_19150 PF08323 Starch synthase catalytic domain ISN31_19150 PF00534 Glycosyl transferases group 1 ISN31_19160 PF00486 Transcriptional regulatory protein, C terminal ISN31_19160 PF00072 Response regulator receiver domain ISN31_19165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN31_19165 PF00512 His Kinase A (phospho-acceptor) domain ISN31_19165 PF08448 PAS fold ISN31_19165 PF13188 PAS domain ISN31_19165 PF00072 Response regulator receiver domain ISN31_19170 PF13632 Glycosyl transferase family group 2 ISN31_19180 PF00072 Response regulator receiver domain ISN31_19180 PF04397 LytTr DNA-binding domain ISN31_19185 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ISN31_19185 PF03900 Porphobilinogen deaminase, C-terminal domain ISN31_19210 PF01638 HxlR-like helix-turn-helix ISN31_19225 PF00326 Prolyl oligopeptidase family ISN31_19225 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ISN31_19230 PF00155 Aminotransferase class I and II ISN31_19235 PF00326 Prolyl oligopeptidase family ISN31_19235 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ISN31_19240 PF04304 Protein of unknown function (DUF454) ISN31_19250 PF01678 Diaminopimelate epimerase ISN31_19260 PF02899 Phage integrase, N-terminal SAM-like domain ISN31_19260 PF00589 Phage integrase family ISN31_19265 PF00227 Proteasome subunit ISN31_19270 PF00004 ATPase family associated with various cellular activities (AAA) ISN31_19270 PF07724 AAA domain (Cdc48 subfamily) ISN31_19270 PF10431 C-terminal, D2-small domain, of ClpB protein ISN31_19285 PF00593 TonB dependent receptor ISN31_19285 PF07715 TonB-dependent Receptor Plug Domain ISN31_19295 PF01209 ubiE/COQ5 methyltransferase family ISN31_19310 PF11838 ERAP1-like C-terminal domain ISN31_19310 PF01433 Peptidase family M1 domain ISN31_19315 PF00364 Biotin-requiring enzyme ISN31_19315 PF00561 alpha/beta hydrolase fold ISN31_19330 PF13360 PQQ-like domain ISN31_19335 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISN31_19340 PF00034 Cytochrome c ISN31_19340 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP ISN31_19340 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ISN31_19350 PF00107 Zinc-binding dehydrogenase ISN31_19350 PF08240 Alcohol dehydrogenase GroES-like domain ISN31_19360 PF02954 Bacterial regulatory protein, Fis family ISN31_19360 PF01590 GAF domain ISN31_19360 PF00158 Sigma-54 interaction domain ISN31_19365 PF00294 pfkB family carbohydrate kinase ISN31_19375 PF04085 rod shape-determining protein MreC ISN31_19385 PF00905 Penicillin binding protein transpeptidase domain ISN31_19385 PF03717 Penicillin-binding Protein dimerisation domain ISN31_19390 PF01098 Cell cycle protein ISN31_19395 PF01083 Cutinase ISN31_19400 PF00295 Glycosyl hydrolases family 28 ISN31_19405 PF13406 Transglycosylase SLT domain ISN31_19410 PF03330 Lytic transglycolase ISN31_19410 PF05036 Sporulation related domain ISN31_19415 PF07943 Penicillin-binding protein 5, C-terminal domain ISN31_19415 PF00768 D-alanyl-D-alanine carboxypeptidase ISN31_19490 PF04359 Protein of unknown function (DUF493) ISN31_19495 PF03099 Biotin/lipoate A/B protein ligase family ISN31_19500 PF04055 Radical SAM superfamily ISN31_19500 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family ISN31_19505 PF03572 Peptidase family S41 ISN31_19505 PF11818 C-terminal domain of tail specific protease (DUF3340) ISN31_19505 PF00595 PDZ domain ISN31_19505 PF17804 Tail specific protease N-terminal domain ISN31_19530 PF01467 Cytidylyltransferase-like ISN31_19530 PF00293 NUDIX domain ISN31_19550 PF08338 Domain of unknown function (DUF1731) ISN31_19550 PF01370 NAD dependent epimerase/dehydratase family ISN31_19560 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ISN31_19560 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ISN31_19565 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ISN31_19565 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ISN31_19570 PF04972 BON domain ISN31_19580 PF00989 PAS fold ISN31_19580 PF00512 His Kinase A (phospho-acceptor) domain ISN31_19580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN31_19585 PF00072 Response regulator receiver domain ISN31_19590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN31_19590 PF00512 His Kinase A (phospho-acceptor) domain ISN31_19600 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ISN31_19620 PF03330 Lytic transglycolase ISN31_19630 PF00703 Glycosyl hydrolases family 2 ISN31_19630 PF16355 Domain of unknown function (DUF4982) ISN31_19630 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 ISN31_19630 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ISN31_19630 PF02837 Glycosyl hydrolases family 2, sugar binding domain ISN31_19645 PF07702 UTRA domain ISN31_19645 PF00392 Bacterial regulatory proteins, gntR family ISN31_19650 PF07690 Major Facilitator Superfamily ISN31_19655 PF00356 Bacterial regulatory proteins, lacI family ISN31_19660 PF01380 SIS domain ISN31_19665 PF01979 Amidohydrolase family ISN31_19675 PF12627 Probable RNA and SrmB- binding site of polymerase A ISN31_19675 PF01966 HD domain ISN31_19675 PF01743 Poly A polymerase head domain ISN31_19680 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain ISN31_19680 PF01464 Transglycosylase SLT domain ISN31_19685 PF00593 TonB dependent receptor ISN31_19685 PF07715 TonB-dependent Receptor Plug Domain ISN31_19695 PF01323 DSBA-like thioredoxin domain ISN31_19700 PF01323 DSBA-like thioredoxin domain ISN31_19705 PF00034 Cytochrome c ISN31_19710 PF01926 50S ribosome-binding GTPase ISN31_19730 PF04107 Glutamate-cysteine ligase family 2(GCS2) ISN31_19745 PF00512 His Kinase A (phospho-acceptor) domain ISN31_19745 PF00672 HAMP domain ISN31_19745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN31_19745 PF16527 Two-component sensor protein CpxA, periplasmic domain ISN31_19750 PF00072 Response regulator receiver domain ISN31_19750 PF00486 Transcriptional regulatory protein, C terminal ISN31_19755 PF02583 Metal-sensitive transcriptional repressor ISN31_19760 PF08240 Alcohol dehydrogenase GroES-like domain ISN31_19760 PF00107 Zinc-binding dehydrogenase ISN31_19765 PF04828 Glutathione-dependent formaldehyde-activating enzyme ISN31_19770 PF00756 Putative esterase ISN31_19775 PF02567 Phenazine biosynthesis-like protein ISN31_19810 PF01979 Amidohydrolase family ISN31_19810 PF00449 Urease alpha-subunit, N-terminal domain ISN31_19815 PF01979 Amidohydrolase family ISN31_19835 PF00462 Glutaredoxin ISN31_19840 PF01522 Polysaccharide deacetylase ISN31_19860 PF00155 Aminotransferase class I and II ISN31_19865 PF03193 RsgA GTPase ISN31_19880 PF00128 Alpha amylase, catalytic domain ISN31_19895 PF00356 Bacterial regulatory proteins, lacI family ISN31_19900 PF00106 short chain dehydrogenase ISN31_19905 PF03600 Citrate transporter ISN31_19915 PF00072 Response regulator receiver domain ISN31_19915 PF00486 Transcriptional regulatory protein, C terminal ISN31_19920 PF00512 His Kinase A (phospho-acceptor) domain ISN31_19920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN31_19920 PF08521 Two-component sensor kinase N-terminal ISN31_19930 PF00196 Bacterial regulatory proteins, luxR family ISN31_19930 PF00072 Response regulator receiver domain ISN31_19940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN31_19940 PF00512 His Kinase A (phospho-acceptor) domain ISN31_19950 PF00375 Sodium:dicarboxylate symporter family ISN31_19955 PF03949 Malic enzyme, NAD binding domain ISN31_19955 PF00390 Malic enzyme, N-terminal domain ISN31_19955 PF01515 Phosphate acetyl/butaryl transferase ISN31_19995 PF00005 ABC transporter ISN31_19995 PF00664 ABC transporter transmembrane region ISN31_19995 PF03412 Peptidase C39 family ISN31_20020 PF03279 Bacterial lipid A biosynthesis acyltransferase ISN31_20025 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ISN31_20030 PF02321 Outer membrane efflux protein ISN31_20045 PF00990 Diguanylate cyclase, GGDEF domain ISN31_20050 PF00180 Isocitrate/isopropylmalate dehydrogenase ISN31_20055 PF00694 Aconitase C-terminal domain ISN31_20065 PF00330 Aconitase family (aconitate hydratase) ISN31_20075 PF00682 HMGL-like ISN31_20075 PF08502 LeuA allosteric (dimerisation) domain ISN31_20080 PF00291 Pyridoxal-phosphate dependent enzyme ISN31_20090 PF00205 Thiamine pyrophosphate enzyme, central domain ISN31_20090 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISN31_20090 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISN31_20095 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ISN31_20095 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ISN31_20100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISN31_20100 PF00672 HAMP domain ISN31_20105 PF13667 ThiC-associated domain ISN31_20105 PF01964 Radical SAM ThiC family ISN31_20120 PF00719 Inorganic pyrophosphatase ISN31_20130 PF03030 Inorganic H+ pyrophosphatase ISN31_20140 PF00365 Phosphofructokinase ISN31_20150 PF02875 Mur ligase family, glutamate ligase domain ISN31_20150 PF08245 Mur ligase middle domain ISN31_20150 PF01225 Mur ligase family, catalytic domain ISN31_20165 PF01569 PAP2 superfamily ISN31_20180 PF00480 ROK family ISN31_20190 PF00202 Aminotransferase class-III ISN31_20200 PF00202 Aminotransferase class-III ISN31_20210 PF13276 HTH-like domain ISN31_20210 PF13333 Integrase core domain ISN31_20210 PF00665 Integrase core domain ISN31_20215 PF01527 Transposase ISN31_20220 PF02581 Thiamine monophosphate synthase ISN31_20225 PF00301 Rubredoxin ISN31_20230 PF13369 Transglutaminase-like superfamily ISN31_20240 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ISN31_20250 PF01812 5-formyltetrahydrofolate cyclo-ligase family ISN31_20260 PF05164 Cell division protein ZapA ISN31_20270 PF03707 Bacterial signalling protein N terminal repeat ISN31_20270 PF00990 Diguanylate cyclase, GGDEF domain ISN31_20270 PF00563 EAL domain ISN31_20275 PF03695 Uncharacterised protein family (UPF0149) ISN31_20280 PF00557 Metallopeptidase family M24 ISN31_20280 PF05195 Aminopeptidase P, N-terminal domain ISN31_20285 PF00557 Metallopeptidase family M24 ISN31_20305 PF06969 HemN C-terminal domain ISN31_20305 PF04055 Radical SAM superfamily ISN31_20310 PF01725 Ham1 family ISN31_20315 PF01138 3' exoribonuclease family, domain 1 ISN31_20315 PF03725 3' exoribonuclease family, domain 2 ISN31_20320 PF08340 Domain of unknown function (DUF1732) ISN31_20320 PF03755 YicC-like family, N-terminal region ISN31_20325 PF00625 Guanylate kinase ISN31_20330 PF01192 RNA polymerase Rpb6 ISN31_20335 PF02824 TGS domain ISN31_20335 PF13291 ACT domain ISN31_20335 PF04607 Region found in RelA / SpoT proteins ISN31_20340 PF01042 Endoribonuclease L-PSP ISN31_20345 PF00270 DEAD/DEAH box helicase ISN31_20345 PF00271 Helicase conserved C-terminal domain ISN31_20345 PF17191 RecG wedge domain ISN31_20350 PF01156 Inosine-uridine preferring nucleoside hydrolase ISN31_20355 PF01197 Ribosomal protein L31 ISN31_20360 PF00285 Citrate synthase, C-terminal domain ISN31_20375 PF00905 Penicillin binding protein transpeptidase domain ISN31_20375 PF17092 Penicillin-binding protein OB-like domain ISN31_20375 PF00912 Transglycosylase ISN31_20380 PF11104 Type IV pilus assembly protein PilM; ISN31_20390 PF04350 Pilus assembly protein, PilO ISN31_20395 PF04351 Pilus assembly protein, PilP ISN31_20400 PF11741 AMIN domain ISN31_20400 PF07660 Secretin and TonB N terminus short domain ISN31_20400 PF03958 Bacterial type II/III secretion system short domain ISN31_20400 PF00263 Bacterial type II and III secretion system protein ISN31_20405 PF07726 ATPase family associated with various cellular activities (AAA) ISN31_20405 PF17863 AAA lid domain ISN31_20410 PF01882 Protein of unknown function DUF58 ISN31_20420 PF13519 von Willebrand factor type A domain ISN31_20435 PF00375 Sodium:dicarboxylate symporter family ISN31_20440 PF00456 Transketolase, thiamine diphosphate binding domain ISN31_20440 PF02779 Transketolase, pyrimidine binding domain ISN31_20440 PF02780 Transketolase, C-terminal domain ISN31_20475 PF01551 Peptidase family M23 ISN31_20475 PF04225 Opacity-associated protein A LysM-like domain ISN31_20480 PF01476 LysM domain ISN31_20480 PF03734 L,D-transpeptidase catalytic domain ISN31_20505 PF00005 ABC transporter ISN31_20505 PF03459 TOBE domain ISN31_20510 PF00528 Binding-protein-dependent transport system inner membrane component ISN31_20520 PF00753 Metallo-beta-lactamase superfamily ISN31_20525 PF01022 Bacterial regulatory protein, arsR family ISN31_20550 PF03922 OmpW family ISN31_20555 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ISN31_20555 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ISN31_20590 PF00162 Phosphoglycerate kinase ISN31_20595 PF13419 Haloacid dehalogenase-like hydrolase ISN31_20605 PF00274 Fructose-bisphosphate aldolase class-I ISN31_20610 PF01661 Macro domain ISN31_20645 PF00266 Aminotransferase class-V ISN31_20665 PF03466 LysR substrate binding domain ISN31_20665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISN31_20675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISN31_20675 PF00512 His Kinase A (phospho-acceptor) domain ISN31_20675 PF00672 HAMP domain ISN31_20675 PF00072 Response regulator receiver domain ISN31_20675 PF01627 Hpt domain ISN31_20680 PF03960 ArsC family ISN31_20710 PF01507 Phosphoadenosine phosphosulfate reductase family